Citrus Sinensis ID: 008330
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 570 | 2.2.26 [Sep-21-2011] | |||||||
| P23548 | 397 | Endoglucanase OS=Paenibac | yes | no | 0.375 | 0.539 | 0.241 | 2e-08 | |
| P54583 | 562 | Endoglucanase E1 OS=Acido | yes | no | 0.478 | 0.485 | 0.240 | 5e-08 | |
| P19487 | 484 | Major extracellular endog | yes | no | 0.328 | 0.386 | 0.271 | 2e-05 |
| >sp|P23548|GUN_PAEPO Endoglucanase OS=Paenibacillus polymyxa PE=3 SV=2 | Back alignment and function desciption |
|---|
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 96/253 (37%), Gaps = 39/253 (15%)
Query: 46 IVDENGHRVKLACVNWVSHLEP-VVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATN 104
IVDE+G +NW P GL + MD + +V G+N +RL +
Sbjct: 46 IVDESGKEAAFNGLNWFGLETPNYTLHGLWSRSMDDMLDQVKKEGYNLIRLPY------- 98
Query: 105 DSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHI 164
Q F ++I NP +V L I+ ++ G + +ILD H
Sbjct: 99 -------SNQLFDSSSRPDSID--YHKNPDLVGLNPIQIMDKLIEKAGQRGIQIILDRH- 148
Query: 165 SKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPK---- 220
+PG S ++ QY WI +A + V+G L NE G
Sbjct: 149 -RPG---SGGQSELWYTSQYPE-SRWISDWKMLADRYKNNPTVIGADLHNEPHGQASWGT 203
Query: 221 -QNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFD-----------KDLSFVRNQAVNLT 268
DW Q A+ + NP L+++ G++ + +L+ V N V L
Sbjct: 204 GNASTDWRLAAQRAGNAILSVNPNWLILVEGVDHNVQGNNSQYWWGGNLTGVANYPVVLD 263
Query: 269 FTGKLVFEAHWYG 281
++V+ H YG
Sbjct: 264 VPNRVVYSPHDYG 276
|
Paenibacillus polymyxa (taxid: 1406) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4 |
| >sp|P54583|GUN1_ACIC1 Endoglucanase E1 OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=Acel_0614 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 125/316 (39%), Gaps = 43/316 (13%)
Query: 31 SKPAIGLPLSTNSRWIVDENGHRVKLACVNWVSHLE-PVVAEGLSKQPMDMLSKRVVDMG 89
++ A G T+ R I+D N V++A +NW V GL + + ++ +G
Sbjct: 39 ARAAGGGYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLG 98
Query: 90 FNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVA 149
+N +RL + ++D L T+ S + + + G+ S ++ +VA
Sbjct: 99 YNTIRLPY-----SDDILKPGTMPNSINFYQMNQDLQGLTS----------LQVMDKIVA 143
Query: 150 SLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVG 209
G + +ILD H +P C S + + WI L +A + G VVG
Sbjct: 144 YAGQIGLRIILDRH--RPD-CSGQS---ALWYTSSVSEATWISDLQALAQRYKGNPTVVG 197
Query: 210 MSLRNELRGPK-----QNVKDWYRYMQLGAEAVHAANPEVLVILSGLN--------FDKD 256
L NE P DW + AV + NP +L+ + G+ + +
Sbjct: 198 FDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYWWGGN 257
Query: 257 LSFVRNQAVNLTFTGKLVFEAHWYGFT-DGQAWVDGN--PNQVCGRVVDNVMRLSGFLLE 313
L V L +LV+ AH Y + Q W PN + G N G+L
Sbjct: 258 LQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGIWNKNW----GYLFN 313
Query: 314 QG-WPLFVSEFGADLR 328
Q P+++ EFG L+
Sbjct: 314 QNIAPVWLGEFGTTLQ 329
|
Has a very high specific activity on carboxymethylcellulose. Acidothermus cellulolyticus (strain ATCC 43068 / 11B) (taxid: 351607) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 |
| >sp|P19487|GUNA_XANCP Major extracellular endoglucanase OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568) GN=engXCA PE=1 SV=2 | Back alignment and function description |
|---|
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 30/217 (13%)
Query: 42 NSRWIVDENGHRVKLACVNWVSHLEPV--VAEGLSKQPMDMLSKRVVDMGFNCVRLTWPL 99
NSR IVD++G V+L VN V E V GL + + ++ +GFN VRL P
Sbjct: 30 NSRQIVDDSGKVVQLKGVN-VFGFETGNHVMHGLWARNWKDMIVQMQGLGFNAVRL--PF 86
Query: 100 YLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVI 159
AT L S T+ S S N + L ++ V+A + V+
Sbjct: 87 CPAT---LRSDTMPASID-----------YSRNADLQGLTSLQILDKVIAEFNARGMYVL 132
Query: 160 LDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP 219
LD+H C S+ + + W+ L +A + V V+G+ L+NE G
Sbjct: 133 LDHHTPD---CAGISE---LWYTGSYTEAQWLADLRFVANRYKNVPYVLGLDLKNEPHGA 186
Query: 220 K-----QNVKDWYRYMQLGAEAVHAANPEVLVILSGL 251
DW + + G+ AV A P+ L+ + G+
Sbjct: 187 ATWGTGNAATDWNKAAERGSAAVLAVAPKWLIAVEGI 223
|
Xanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568) (taxid: 190485) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 570 | ||||||
| 255547996 | 566 | hydrolase, hydrolyzing O-glycosyl compou | 0.989 | 0.996 | 0.771 | 0.0 | |
| 224102379 | 544 | predicted protein [Populus trichocarpa] | 0.942 | 0.987 | 0.763 | 0.0 | |
| 224110842 | 513 | predicted protein [Populus trichocarpa] | 0.898 | 0.998 | 0.777 | 0.0 | |
| 225424600 | 552 | PREDICTED: uncharacterized protein LOC10 | 0.942 | 0.972 | 0.729 | 0.0 | |
| 356511061 | 557 | PREDICTED: uncharacterized protein LOC10 | 0.898 | 0.919 | 0.732 | 0.0 | |
| 449435438 | 549 | PREDICTED: uncharacterized protein LOC10 | 0.914 | 0.948 | 0.710 | 0.0 | |
| 356541382 | 544 | PREDICTED: endoglucanase-like [Glycine m | 0.928 | 0.972 | 0.677 | 0.0 | |
| 356528434 | 574 | PREDICTED: uncharacterized protein LOC10 | 0.915 | 0.909 | 0.679 | 0.0 | |
| 356511059 | 571 | PREDICTED: endoglucanase E1-like [Glycin | 0.980 | 0.978 | 0.640 | 0.0 | |
| 357463207 | 655 | Endoglucanase [Medicago truncatula] gi|3 | 0.907 | 0.789 | 0.642 | 0.0 |
| >gi|255547996|ref|XP_002515055.1| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] gi|223546106|gb|EEF47609.1| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/570 (77%), Positives = 497/570 (87%), Gaps = 6/570 (1%)
Query: 1 MGRFISFSFLTSHPLLLLLIIFPIIIIIQQSKPAIGLPLSTNSRWIVDENGHRVKLACVN 60
MG+F+SFS L+ +L+ I II QS+ LPLSTNSRWIVDENG RVKLACVN
Sbjct: 1 MGKFLSFSSLS----VLITFFIAISAIIPQSQ-VTALPLSTNSRWIVDENGQRVKLACVN 55
Query: 61 WVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLG 120
WVSHLE VVAEGLSKQPMDM++K++V MGFNCVRLTWPLYL TND+LASL+VRQSFQ LG
Sbjct: 56 WVSHLEAVVAEGLSKQPMDMIAKKIVSMGFNCVRLTWPLYLVTNDTLASLSVRQSFQGLG 115
Query: 121 LLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFF 180
LLE+I GIQ+NNPSI+DLPLIKA+QAVV+SLG+NNVMVILDNHISKPGWCCSN DGNGFF
Sbjct: 116 LLESISGIQANNPSIIDLPLIKAYQAVVSSLGDNNVMVILDNHISKPGWCCSNFDGNGFF 175
Query: 181 GDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAA 240
GD YFNPDLWIKGLT+MAT+FNGV NV+GMSLRNELRG KQNV DWYRYM+ GAEAVH+A
Sbjct: 176 GDTYFNPDLWIKGLTQMATLFNGVTNVIGMSLRNELRGQKQNVNDWYRYMEKGAEAVHSA 235
Query: 241 NPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRV 300
NP+VLVILSGLN+DKD SF+RN+ VNL+FTGK+VFE HWYGF+DGQAW GNPNQVCGRV
Sbjct: 236 NPDVLVILSGLNYDKDFSFLRNRPVNLSFTGKVVFEVHWYGFSDGQAWRSGNPNQVCGRV 295
Query: 301 VDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGS 360
VDN+MR+SGFLLEQGWP+FVSEFG D RG NVNDNRYL CF GVAAELDWDWALWTLVGS
Sbjct: 296 VDNLMRISGFLLEQGWPMFVSEFGVDQRGTNVNDNRYLGCFIGVAAELDWDWALWTLVGS 355
Query: 361 YYLREGVIGLNEYYGLFDWNWCDIRNSSFLERISSLQSPFRGPGVFETGLHKVIYHPATG 420
YYLR+GVIGLNEYYG+ +WNWCD+RNSSFL++IS+LQSPF+GPG+ ET HKVI+HP+TG
Sbjct: 356 YYLRQGVIGLNEYYGVLNWNWCDVRNSSFLQQISALQSPFQGPGLSETNPHKVIFHPSTG 415
Query: 421 LCVQRKSFLDPLTLGPCTESEAWSYTPHKTISLKGAYFCLQAKHVGKPAKLGIICTDCGS 480
LCVQRKS L+PL LG CT+SEAW YT T++L+G YFCLQA +GKPAKLGIICTD S
Sbjct: 416 LCVQRKSMLEPLRLGSCTDSEAWRYTSENTLTLRGTYFCLQADELGKPAKLGIICTDSTS 475
Query: 481 TWEIISDSKMHLSSKADNGTTVCLDVDSSNTIVTNTCKCLSRDKTCDPASQWFKLVDSTR 540
W++ISDSKMHLSSK NGT VCLDVDS+NTIV +TCKCLSRD TCDP SQWFKLV+STR
Sbjct: 476 KWDVISDSKMHLSSKITNGTAVCLDVDSNNTIVISTCKCLSRDNTCDPESQWFKLVNSTR 535
Query: 541 SSTTTKSFFQFNPI-LDLPGKDFIWKFFGL 569
SS T K + N I LDLP K+F WKF GL
Sbjct: 536 SSATAKPSLRINSILLDLPAKEFFWKFLGL 565
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224102379|ref|XP_002312657.1| predicted protein [Populus trichocarpa] gi|222852477|gb|EEE90024.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/538 (76%), Positives = 470/538 (87%), Gaps = 1/538 (0%)
Query: 32 KPAIGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFN 91
K LPLSTNSRWIVDENG RVKLACVNWVSHLE +VAEGLS+QPMD ++KR+V MGFN
Sbjct: 5 KHVTALPLSTNSRWIVDENGQRVKLACVNWVSHLEVMVAEGLSEQPMDAIAKRIVSMGFN 64
Query: 92 CVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASL 151
CVRLTWP++L TND+L SLTVRQS + LGLLE+I GIQ+NNPSI+DLPL+ +QAVV+SL
Sbjct: 65 CVRLTWPVFLVTNDTLGSLTVRQSLRSLGLLESISGIQANNPSIIDLPLLNVYQAVVSSL 124
Query: 152 GNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMS 211
G+NNVMVILDNHISKPGWCCSNSDGNGFFGDQYF+PDLWI GLT+MA++FNGV NVVGMS
Sbjct: 125 GDNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFDPDLWITGLTRMASMFNGVPNVVGMS 184
Query: 212 LRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTG 271
LRNELRGPKQNV DWYRYMQ GAEAVH+ANP+V+VILSGLN+DKDLSF+RN+ VNLTF+
Sbjct: 185 LRNELRGPKQNVNDWYRYMQKGAEAVHSANPDVIVILSGLNYDKDLSFLRNRPVNLTFSR 244
Query: 272 KLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN 331
K+VFE HWYGFTDGQAW +GNPNQVCGRVVDN+MR+SGFLL+QGWPLF+SEFG D RG N
Sbjct: 245 KIVFEVHWYGFTDGQAWKNGNPNQVCGRVVDNMMRISGFLLDQGWPLFMSEFGVDQRGTN 304
Query: 332 VNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLE 391
VNDNRYL CF GVAAELD+DWALWTLVGSYY R+GVIG+NEYYG+ + NW + RNS+FL+
Sbjct: 305 VNDNRYLGCFLGVAAELDFDWALWTLVGSYYFRQGVIGMNEYYGVLNSNWRETRNSTFLQ 364
Query: 392 RISSLQSPFRGPGVFETGLHKVIYHPATGLCVQRKSFLDPLTLGPCTESEAWSYTPHKTI 451
+IS+LQSPFRGPGV E LHKVI+HP+TGLCV RKS +PL LGPCT+SEAW+YTP K +
Sbjct: 365 QISALQSPFRGPGVSEVHLHKVIFHPSTGLCVLRKSMFEPLRLGPCTQSEAWNYTPQKIL 424
Query: 452 SLKGAYFCLQAKHVGKPAKLGIICTDCGSTWEIISDSKMHLSSKADNGTTVCLDVDSSNT 511
S+KG YFCLQ + KPAKLGIICTD S WE ISDSKMHLSSKA NGT VCLD+ +NT
Sbjct: 425 SVKGTYFCLQTDELAKPAKLGIICTDSNSKWEAISDSKMHLSSKAPNGTAVCLDIGYNNT 484
Query: 512 IVTNTCKCLSRDKTCDPASQWFKLVDST-RSSTTTKSFFQFNPILDLPGKDFIWKFFG 568
IVT+TCKCLS+D TCDP SQWFKLV+ST RSST TK + IL+ P KDF+WKF G
Sbjct: 485 IVTSTCKCLSKDNTCDPESQWFKLVNSTRRSSTMTKPSSLISSILNFPAKDFLWKFLG 542
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224110842|ref|XP_002315653.1| predicted protein [Populus trichocarpa] gi|222864693|gb|EEF01824.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/512 (77%), Positives = 450/512 (87%)
Query: 35 IGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVR 94
+ LPLST+SRWIVDENG RVKLACVNWVSHLE +VAEGLSKQPMD ++KR++ MGFNCVR
Sbjct: 1 MALPLSTDSRWIVDENGQRVKLACVNWVSHLEVMVAEGLSKQPMDGIAKRILSMGFNCVR 60
Query: 95 LTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154
LTWP++L TND+L SLTVRQS Q GLLE+I GIQ+NNPSI+DL L+ +QAVV+SLGNN
Sbjct: 61 LTWPVFLVTNDTLGSLTVRQSLQSHGLLESISGIQANNPSIIDLSLLDVYQAVVSSLGNN 120
Query: 155 NVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRN 214
NVMVILDNHISKPGWCCSNSDGNGFFGDQYF+PDLWI GLT+MA++F GV NVVGMSLRN
Sbjct: 121 NVMVILDNHISKPGWCCSNSDGNGFFGDQYFDPDLWITGLTRMASMFKGVPNVVGMSLRN 180
Query: 215 ELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLV 274
ELRGPKQNV DWYRYMQ GAEAVH+ANP+V+VILSGLN+DKDLSF+RN+ V+LTF+GK+V
Sbjct: 181 ELRGPKQNVNDWYRYMQKGAEAVHSANPDVIVILSGLNYDKDLSFLRNRPVHLTFSGKIV 240
Query: 275 FEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVND 334
FE HWYGFTDG+AW GN NQVCGRVVDN+MR+SGFLL+QGWPLFVSEFG D RG NVND
Sbjct: 241 FEVHWYGFTDGEAWKSGNSNQVCGRVVDNMMRVSGFLLDQGWPLFVSEFGVDQRGTNVND 300
Query: 335 NRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLERIS 394
NRYL CF VAAELD DWALWTLVGSYYLR+GVIG+NEYYG+ +WNW ++RNS+FL+ IS
Sbjct: 301 NRYLGCFLSVAAELDLDWALWTLVGSYYLRQGVIGMNEYYGVLNWNWREVRNSTFLQLIS 360
Query: 395 SLQSPFRGPGVFETGLHKVIYHPATGLCVQRKSFLDPLTLGPCTESEAWSYTPHKTISLK 454
+LQSPFRGPG+ E HKVI+HP+TGLCV RKS L PL LG CTESEAWSYTP K +S+K
Sbjct: 361 ALQSPFRGPGLSEANPHKVIFHPSTGLCVLRKSMLAPLRLGRCTESEAWSYTPQKILSVK 420
Query: 455 GAYFCLQAKHVGKPAKLGIICTDCGSTWEIISDSKMHLSSKADNGTTVCLDVDSSNTIVT 514
G YFCLQ KPAKLGIICTD S WE ISDSKMHLSS A +G TVCLD+DS+NTIVT
Sbjct: 421 GTYFCLQTDDAAKPAKLGIICTDSNSKWETISDSKMHLSSNASSGITVCLDIDSNNTIVT 480
Query: 515 NTCKCLSRDKTCDPASQWFKLVDSTRSSTTTK 546
NTCKCLS+D CDP SQWFKLV+STRSST TK
Sbjct: 481 NTCKCLSKDNACDPESQWFKLVNSTRSSTMTK 512
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424600|ref|XP_002285424.1| PREDICTED: uncharacterized protein LOC100244027 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/543 (72%), Positives = 458/543 (84%), Gaps = 6/543 (1%)
Query: 19 LIIFPIIIIIQQSKPAIGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPM 78
L I P+ ++ KP + LPL TNSRWIVDE+G RVKLACVNW SHLE VVAEGLSKQP+
Sbjct: 13 LSILPLPLL----KPVVALPLYTNSRWIVDEDGARVKLACVNWPSHLEAVVAEGLSKQPV 68
Query: 79 DMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDL 138
M+SK++ MGFNCVRLTWPL+LATN SLASLTVRQSFQ+LGLLE+I G Q+NNPS+VDL
Sbjct: 69 AMISKKIGSMGFNCVRLTWPLFLATNQSLASLTVRQSFQRLGLLESIAGFQANNPSMVDL 128
Query: 139 PLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMA 198
PLI A+QAVV+ L +NNVMVILDNH+SKPGWCCS+ DGNGFFGDQYFNPDLW++GLT+MA
Sbjct: 129 PLISAYQAVVSGLADNNVMVILDNHLSKPGWCCSSFDGNGFFGDQYFNPDLWVQGLTRMA 188
Query: 199 TIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLS 258
T+F GV NVVGMSLRNELRGPKQNVKDWYRYMQ GAEAVH+ANP+VLVI+SGL++D DLS
Sbjct: 189 TMFRGVTNVVGMSLRNELRGPKQNVKDWYRYMQKGAEAVHSANPDVLVIVSGLSYDTDLS 248
Query: 259 FVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPL 318
FV Q + LTFTGKLVFE HWYGFTDG AW G+PNQVCGRVV++VMR G LLE+GWPL
Sbjct: 249 FVLKQELELTFTGKLVFEMHWYGFTDGSAWETGSPNQVCGRVVESVMRRGGVLLEKGWPL 308
Query: 319 FVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFD 378
FVSEFG D RG NVNDNRYLNCFFG+AAELD+DWALWTLVGSYY REGVIGL E+YGL +
Sbjct: 309 FVSEFGVDQRGTNVNDNRYLNCFFGLAAELDFDWALWTLVGSYYTREGVIGLEEFYGLLN 368
Query: 379 WNWCDIRNSSFLERISSLQSPFRGPGVFETGLHKVIYHPATGLCVQRKSFLDPLTLGPCT 438
WNWC++RNSSFL+RIS+LQSPF+GP + + HKVI+HPATGLC+ KS +PLTLGPC
Sbjct: 369 WNWCEVRNSSFLQRISALQSPFQGPDLSDARPHKVIFHPATGLCIVWKSVFEPLTLGPCP 428
Query: 439 ESEAWSYTPHKTISLKGAYFCLQAKHVGKPAKLGIICTDCGSTWEIISDSKMHLSSKADN 498
ES+AWSYTP KT+ +K YFCLQA G P KLGIICT+ GS WE ISDSKMHLS+K +
Sbjct: 429 ESDAWSYTPQKTLIMKETYFCLQADGPGNPGKLGIICTEPGSKWESISDSKMHLSTKLGD 488
Query: 499 GTTVCLDVDSSNTIVTNTCKCLSRDKTCDPASQWFKLVDSTRSSTTTKSFFQFNPILDLP 558
GTTVCLD+DSSN IVTN CKCLS D CDP SQWFK+V++T + +T+ Q + LDL
Sbjct: 489 GTTVCLDIDSSNNIVTNACKCLSGDNKCDPGSQWFKIVNAT--NISTRPLIQISSNLDLN 546
Query: 559 GKD 561
G +
Sbjct: 547 GAE 549
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356511061|ref|XP_003524250.1| PREDICTED: uncharacterized protein LOC100790415 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/512 (73%), Positives = 440/512 (85%)
Query: 36 GLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL 95
GLPL T+SRWIV+E+G RVKLACVNWVSHLE VVAEGLSK+P+D++S + MGFNCVRL
Sbjct: 32 GLPLHTDSRWIVNEDGQRVKLACVNWVSHLEAVVAEGLSKKPVDVISNGIKSMGFNCVRL 91
Query: 96 TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155
TWP+ L TNDSLASLTVR SFQ L LLE+I G+Q+NNPSI+DLPLI+AFQAVV SLG+N+
Sbjct: 92 TWPIVLVTNDSLASLTVRSSFQNLALLESIAGVQTNNPSIIDLPLIQAFQAVVKSLGDND 151
Query: 156 VMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNE 215
VMVILDNHI++PGWCCSNSDGNGFFGD++F+P+ WI GLTKMA++FNGV NVVGMSLRNE
Sbjct: 152 VMVILDNHITQPGWCCSNSDGNGFFGDKFFDPNQWILGLTKMASLFNGVTNVVGMSLRNE 211
Query: 216 LRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVF 275
LRGPKQNV DWY+YM GAEA+HAANP+VLVILSGLNFDKDLSF++N+ V+LTF GKLV+
Sbjct: 212 LRGPKQNVNDWYKYMVKGAEAIHAANPDVLVILSGLNFDKDLSFIQNRPVSLTFKGKLVY 271
Query: 276 EAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDN 335
EAHWY FTDGQAWV+GNPNQVCG+V N+MR SGFL+ QGWPLF+SEFG DLRG NVNDN
Sbjct: 272 EAHWYAFTDGQAWVNGNPNQVCGQVAGNMMRTSGFLVNQGWPLFISEFGGDLRGTNVNDN 331
Query: 336 RYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLERISS 395
RYLNCF VAAELD DWALWTLVGSYY R+GVIG+ E+YG+ W+W +RN++FL RIS+
Sbjct: 332 RYLNCFLAVAAELDLDWALWTLVGSYYFRQGVIGMEEFYGILSWDWTQVRNTTFLNRISA 391
Query: 396 LQSPFRGPGVFETGLHKVIYHPATGLCVQRKSFLDPLTLGPCTESEAWSYTPHKTISLKG 455
LQ PFRGPG+ +K+I+HP TGLCV RKS LDPLTLGPC S+ W YTP K +S+KG
Sbjct: 392 LQLPFRGPGITRGNPYKLIFHPLTGLCVIRKSLLDPLTLGPCYLSDGWKYTPQKILSIKG 451
Query: 456 AYFCLQAKHVGKPAKLGIICTDCGSTWEIISDSKMHLSSKADNGTTVCLDVDSSNTIVTN 515
YFC+QA++ G PAKLGIIC+D S WE+ISDSK+HLSSK + + VCLDVD +N IVTN
Sbjct: 452 TYFCIQAENEGMPAKLGIICSDPNSRWEMISDSKLHLSSKLSDDSNVCLDVDDNNNIVTN 511
Query: 516 TCKCLSRDKTCDPASQWFKLVDSTRSSTTTKS 547
CKCLSRD+TCDP+SQWFKL+DS R S T S
Sbjct: 512 ACKCLSRDRTCDPSSQWFKLIDSGRRSMLTTS 543
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449435438|ref|XP_004135502.1| PREDICTED: uncharacterized protein LOC101217177 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/522 (71%), Positives = 445/522 (85%), Gaps = 1/522 (0%)
Query: 31 SKPAIGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGF 90
+ A+GLPL T++RWIVD G RVKL CVNWVSHLE VVAEGLSKQP++ +S R+ +GF
Sbjct: 13 ASAAVGLPLHTDTRWIVDGAGERVKLRCVNWVSHLEAVVAEGLSKQPIEEISNRIQWLGF 72
Query: 91 NCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVAS 150
NCVRLTWPL+LATN+SL SLTVRQSFQ+LGL EAI GIQ+NNP I+DLPL+KAF+AVV
Sbjct: 73 NCVRLTWPLFLATNESLNSLTVRQSFQRLGLAEAIAGIQANNPFIIDLPLLKAFEAVVGK 132
Query: 151 LGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGM 210
LG +MVILDNHISKPGWCCSN DGNGFFGDQYFNPDLWIKGLT++AT+FNGV +VV M
Sbjct: 133 LGEGKLMVILDNHISKPGWCCSNFDGNGFFGDQYFNPDLWIKGLTRIATMFNGVNHVVAM 192
Query: 211 SLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFT 270
SLRNELRGPKQNV DWYRYMQ GAEAVH+ANP++L+ILSGL++D+DLSF++NQ +NLTFT
Sbjct: 193 SLRNELRGPKQNVNDWYRYMQRGAEAVHSANPDILIILSGLSYDRDLSFLKNQPINLTFT 252
Query: 271 GKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGN 330
K V+E HWY F+DG +W GN NQVCGR +N+M++SGFLL+QG+PLF+SEFG D RG
Sbjct: 253 SKTVYEVHWYAFSDGSSWESGNSNQVCGRTTNNLMKMSGFLLQQGFPLFISEFGIDQRGT 312
Query: 331 NVNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFL 390
NVNDNRYL+CF VAAELD DWA+WTLVGSYYLREGV+GLNE+YG+ DWNWC++RNS+FL
Sbjct: 313 NVNDNRYLSCFLAVAAELDLDWAVWTLVGSYYLREGVVGLNEFYGILDWNWCNLRNSTFL 372
Query: 391 ERISSLQSPFRGPGVFETGLHKVIYHPATGLCVQRKSFLDPLTLGPCTESEAWSYTPHKT 450
+RIS+LQSPF+GPG+ E + VI+HP +GLCV RKS LDPLTLGPC +++AW YTP K
Sbjct: 373 QRISALQSPFQGPGLAERREYNVIFHPLSGLCVVRKSLLDPLTLGPCVDTDAWYYTPQKF 432
Query: 451 ISLKGAYFCLQAKHVGKPAKLGIICTDCGSTWEIISDSKMHLSSKADNGTTVCLDVDSS- 509
++LKG YFC+QA +GK AKLGIICT + W++ISDSK+HLSSK+ NG+ VCLDVDSS
Sbjct: 433 LTLKGTYFCIQADEIGKQAKLGIICTVNNAKWDMISDSKLHLSSKSSNGSLVCLDVDSST 492
Query: 510 NTIVTNTCKCLSRDKTCDPASQWFKLVDSTRSSTTTKSFFQF 551
N IVTN+CKCLSRD +CDP+SQWFKLV+STRS +S
Sbjct: 493 NEIVTNSCKCLSRDSSCDPSSQWFKLVNSTRSLGRGRSMINM 534
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356541382|ref|XP_003539156.1| PREDICTED: endoglucanase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/534 (67%), Positives = 444/534 (83%), Gaps = 5/534 (0%)
Query: 14 PLLLLLIIFPII--IIIQQSKPAI--GLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVV 69
PL+ + +I ++ + +Q +KP + G PL T+ RWIVDE+G RVKLACVNWVSHL+ VV
Sbjct: 3 PLITVRVIVLLLLGVTLQITKPVVVKGFPLHTSERWIVDESGKRVKLACVNWVSHLDAVV 62
Query: 70 AEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQ 129
AEGLS+QP+D +SKR+ MGFNCVRLTWPL+L TNDS+ASLT+R SFQ LGL++++ G+Q
Sbjct: 63 AEGLSQQPLDEISKRIKTMGFNCVRLTWPLFLVTNDSIASLTLRNSFQNLGLIQSLNGVQ 122
Query: 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDL 189
+ NPSI+DLPLIKA+QAVV SLG N+VMVILDNH+S+PGWCCSN DGNGFFGDQYF+PDL
Sbjct: 123 AINPSIIDLPLIKAYQAVVKSLGENDVMVILDNHVSQPGWCCSNLDGNGFFGDQYFDPDL 182
Query: 190 WIKGLTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILS 249
WI GLTKMATIF GV NVV MSLRNELRGP+QNV WYRYM GAEAVHAANP+VLVILS
Sbjct: 183 WIMGLTKMATIFKGVTNVVAMSLRNELRGPRQNVNVWYRYMPKGAEAVHAANPDVLVILS 242
Query: 250 GLNFDKDLSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSG 309
GLNFD +LSF+RN+AV L+F GKLVFE HWY F+DGQAW GNPNQVCG+V +NVMR +G
Sbjct: 243 GLNFDTNLSFIRNEAVKLSFNGKLVFEVHWYSFSDGQAWTLGNPNQVCGQVTENVMRRAG 302
Query: 310 FLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIG 369
FLL+QGWPLFVSEFG DLRG +VNDNRYLNCF + A+LD DWALWTL G+YY+R+G +G
Sbjct: 303 FLLDQGWPLFVSEFGVDLRGTSVNDNRYLNCFMALVAQLDLDWALWTLGGNYYIRQGDVG 362
Query: 370 LNEYYGLFDWNWCDIRNSSFLERISSLQSPFRGPGVFETGLHKVIYHPATGLCVQRKSFL 429
+ EY+G+ + +W +RN+SFL+RIS++Q PF+GPG+ E +KVI+HP TGLC+ R S +
Sbjct: 363 MEEYFGILNSDWIQVRNTSFLQRISAIQLPFKGPGLSEAKPYKVIFHPLTGLCILRNSPV 422
Query: 430 DPLT-LGPCTESEAWSYTPHKTISLKGAYFCLQAKHVGKPAKLGIICTDCGSTWEIISDS 488
+PL LGPC+ S+AW YT K +S+KG YFCLQA+ GK AKLG C+ S WE+ISDS
Sbjct: 423 EPLMRLGPCSNSDAWEYTDQKILSIKGTYFCLQAEEEGKQAKLGNACSGSNSRWEMISDS 482
Query: 489 KMHLSSKADNGTTVCLDVDSSNTIVTNTCKCLSRDKTCDPASQWFKLVDSTRSS 542
KMHLS++ +N + VCLDVD++N IVTN C+CLS+D TCDPA+QWFKLVDSTR S
Sbjct: 483 KMHLSTQTNNASGVCLDVDTNNIIVTNICQCLSKDNTCDPATQWFKLVDSTRKS 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356528434|ref|XP_003532808.1| PREDICTED: uncharacterized protein LOC100818309 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/527 (67%), Positives = 425/527 (80%), Gaps = 5/527 (0%)
Query: 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWP 98
L T+SRWI+++ G RVKLACVNWVSHLE VAEGLSK+P+D +SK + MGFNCVRLTWP
Sbjct: 48 LHTDSRWILNQGGQRVKLACVNWVSHLEVAVAEGLSKKPVDAISKGIKSMGFNCVRLTWP 107
Query: 99 LYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158
LATNDSLASL+VR+SFQ LGLLE++ G+Q+NNPSI+DLPLI+AFQAVV SLG+N+VMV
Sbjct: 108 TLLATNDSLASLSVRRSFQSLGLLESVAGVQTNNPSIIDLPLIQAFQAVVKSLGDNDVMV 167
Query: 159 ILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218
ILDNH++ PGWCC SDGNGFFGD++FNPD WI GLTKMAT+FNGV NVVGMSLRNELRG
Sbjct: 168 ILDNHLTNPGWCCGYSDGNGFFGDKFFNPDQWIFGLTKMATLFNGVTNVVGMSLRNELRG 227
Query: 219 PKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAH 278
PKQNV DWY+YM GAEAVHAANP+VLVILSG+NFD LSF+R++ V+LTF GKLVFE H
Sbjct: 228 PKQNVNDWYKYMVKGAEAVHAANPDVLVILSGINFDTSLSFIRDRPVSLTFKGKLVFEVH 287
Query: 279 WYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYL 338
YGFTDG AW DGNPNQVCG+V ++ + S FL++QGWPLFVSEFG DLRG NVNDNRYL
Sbjct: 288 RYGFTDGGAWADGNPNQVCGKVTADIKQTSTFLVDQGWPLFVSEFGGDLRGTNVNDNRYL 347
Query: 339 NCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLERISSLQS 398
NCF + AELD DWA WTLVGSYY REGVIG+ E+YGL W+W +R++SFL RIS+LQ
Sbjct: 348 NCFLALVAELDLDWAYWTLVGSYYFREGVIGMEEFYGLLTWDWTQVRSTSFLNRISALQI 407
Query: 399 PFRGPGVFETGLHKVIYHPATGLCVQRKSFLDPLTLGPCTESEAWSYTPHKTISLKGAYF 458
PFRGPG+ E +K+I+HP TGLCV KS L LTLGPC+ S+AW+YTP KT+ + F
Sbjct: 408 PFRGPGIIEGSAYKLIFHPLTGLCVISKSQLTSLTLGPCSSSDAWTYTPQKTLLINNTNF 467
Query: 459 CLQAKHVGKPAKLGIICTDCGSTWEIISDSKMHLSSKADNGTTVCLDVDSSNTIVTNTCK 518
C+ A+ GKPA L I C+D S WE+ISDS MHLSSK +G+ +CLDVD +N IVT CK
Sbjct: 468 CIHAEQEGKPATLSITCSDANSKWEMISDSNMHLSSKLSDGSNLCLDVDDNNIIVTTACK 527
Query: 519 CLSRDKTCDPASQWFKLVDSTRSSTTTKSFFQFNPILDLPGKDFIWK 565
CL++DKTCDPASQWFKL+DS R S +T S L D +W+
Sbjct: 528 CLNQDKTCDPASQWFKLIDSGRRSISTTSTLSM-----LNSPDILWQ 569
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356511059|ref|XP_003524249.1| PREDICTED: endoglucanase E1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/570 (64%), Positives = 442/570 (77%), Gaps = 11/570 (1%)
Query: 1 MGRFISFSFL---TSHPLLLLLIIFPIIIIIQQSK--PAIGLPLSTNSRWIVDENGHRVK 55
MGR+ S + + S P+L++ ++ + P GL L T+SRWI+D++G RVK
Sbjct: 3 MGRWWSSTLVFTVLSAPILIIALLSSTFEEVDHDNTVPVTGL-LHTDSRWILDQDGRRVK 61
Query: 56 LACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQS 115
LACVNWVSHLE VVAEGLSK+P+D++SK + MGFNCVRLTWP L TNDSLASLTVR+S
Sbjct: 62 LACVNWVSHLEAVVAEGLSKKPVDVISKGIKSMGFNCVRLTWPTLLVTNDSLASLTVRRS 121
Query: 116 FQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSD 175
FQ LGLLE+I G+Q+NNPSI+DL LI+AFQAVV SLG+N+VMVILDNH+++PGWCC N+D
Sbjct: 122 FQSLGLLESIAGVQTNNPSIIDLSLIQAFQAVVKSLGDNDVMVILDNHVTQPGWCCGNTD 181
Query: 176 GNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAE 235
GNGFFGD++F+P+ WI GLTKMAT+F GV VVG+SLRNELRG +QNV DWY+YM GAE
Sbjct: 182 GNGFFGDKFFDPNQWILGLTKMATLFKGVTAVVGISLRNELRGSRQNVNDWYKYMVKGAE 241
Query: 236 AVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQ 295
A HAANP+VLVILSGLNFD DLSF+R++ V+LTF GKLVFE H YGFTDG AW DGNPNQ
Sbjct: 242 AAHAANPDVLVILSGLNFDTDLSFLRDRPVSLTFKGKLVFEVHRYGFTDGGAWADGNPNQ 301
Query: 296 VCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALW 355
VCG+V N+ + SGFL++QGWPLFVSEFG DLRG NVNDNRYLNCF + AELD DWA W
Sbjct: 302 VCGKVTANIKKTSGFLVDQGWPLFVSEFGGDLRGTNVNDNRYLNCFLALVAELDLDWAYW 361
Query: 356 TLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLERISSLQSPFRGPGVFETGLHKVIY 415
TLVGSYY REGVIG+ E+YGL W+W +R++SFL RIS+LQ PFRGPG+ E HK+I+
Sbjct: 362 TLVGSYYFREGVIGMEEFYGLLTWDWNQVRSTSFLNRISALQIPFRGPGIIEGNPHKLIF 421
Query: 416 HPATGLCVQRKSFLDPLTLGPCTESEAWSYTPHKTISLKGAYFCLQAKHVGKPAKLGIIC 475
HP TGLCV KS L LTL C+ S+AW+YTP KT+ + FC+ A+ KPA L + C
Sbjct: 422 HPLTGLCVISKSQLTSLTLAACSSSDAWTYTPQKTLLVNNTDFCIHAEEERKPATLSMTC 481
Query: 476 TDCGSTWEIISDSKMHLSSKADNGTTVCLDVDSSNTIVTNTCKCLSRDKTCDPASQWFKL 535
+D S WE+ISDS MHLSSK +G+ +CLDVD +N IVTN CKCLS+DKTCDP SQWFKL
Sbjct: 482 SDPNSKWEMISDSNMHLSSKLSDGSNLCLDVDDNNIIVTNACKCLSKDKTCDPGSQWFKL 541
Query: 536 VDSTRSSTTTKSFFQFNPILDLPGKDFIWK 565
+DS R S +T S L D +WK
Sbjct: 542 IDSGRRSISTTSTLSM-----LNSPDLLWK 566
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357463207|ref|XP_003601885.1| Endoglucanase [Medicago truncatula] gi|355490933|gb|AES72136.1| Endoglucanase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/520 (64%), Positives = 409/520 (78%), Gaps = 3/520 (0%)
Query: 24 IIIIIQQSKPAIGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSK 83
+++++ LPL TN RWIV+E+ RVKLACVNW SHL+ VAEGLS QP+D++SK
Sbjct: 7 MVLLLLSIVRVTALPLHTNGRWIVNESEKRVKLACVNWASHLDTSVAEGLSHQPLDVISK 66
Query: 84 RVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKA 143
+ MGFNCVRLTWPL L TNDS AS+ VR S LGLL++I GIQ+NNPSI+DLPLIKA
Sbjct: 67 GIKSMGFNCVRLTWPLLLLTNDSFASIKVRHSLHNLGLLQSISGIQANNPSIIDLPLIKA 126
Query: 144 FQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNG 203
+Q VV SLG+ ++MVILDNH+++PGWCCSNSDGNGFFGDQYF+PDLW+ GLTKMAT+FNG
Sbjct: 127 YQTVVKSLGDMDLMVILDNHVTQPGWCCSNSDGNGFFGDQYFDPDLWLMGLTKMATLFNG 186
Query: 204 VRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQ 263
V NVVGMSLRNELRGP+QN+ DWYRYM GAE VHAAN VLVILSGLNFD DLSF+ NQ
Sbjct: 187 VTNVVGMSLRNELRGPRQNLNDWYRYMPKGAEVVHAANSNVLVILSGLNFDTDLSFITNQ 246
Query: 264 AVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEF 323
V LTF GKLVFE HWY F+D QAW NPNQVCG+V + +R SGFLL+QGWPLFVSEF
Sbjct: 247 PVKLTFNGKLVFEEHWYSFSDSQAWTLENPNQVCGQVTSSFVRNSGFLLDQGWPLFVSEF 306
Query: 324 GADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCD 383
G DLRG N+N NR+ NCF VAAELD DWA WTL GSYY+R+GV+ ++E +G+ + NW
Sbjct: 307 GLDLRGKNMNQNRFFNCFMAVAAELDLDWAYWTLSGSYYIRQGVVDVDETFGILNGNWSQ 366
Query: 384 IRNSSFLERISSLQSPFRGPGVFETGLHKVIYHPATGLCVQRKSFLDPLTLGPCTESEAW 443
+RN+SFL+RIS++Q PF+GPG+ E+ +KVI+HP GLCV KS +PL +GPC+ S+ W
Sbjct: 367 VRNTSFLQRISAIQHPFQGPGLLESEPYKVIFHPLRGLCVLSKSLHEPLKMGPCSNSDGW 426
Query: 444 SYTPHKTISLKGAYFCLQAKHVGKPAKLGIICTDCGSTWEIISDSKMHLSSKADNG---T 500
YTP + LKG FCLQ + GK KLG C+ STWE+ISDSKMHLS +N +
Sbjct: 427 EYTPQNILLLKGTKFCLQGEGEGKQVKLGTTCSGPESTWEMISDSKMHLSYNVNNNGSTS 486
Query: 501 TVCLDVDSSNTIVTNTCKCLSRDKTCDPASQWFKLVDSTR 540
+VCLDVD++N +VTN+CKC+S+ TCDPASQWFKL+ ++
Sbjct: 487 SVCLDVDANNIVVTNSCKCISKVNTCDPASQWFKLLGASE 526
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 570 | ||||||
| TAIR|locus:2031850 | 552 | AT1G13130 [Arabidopsis thalian | 0.885 | 0.914 | 0.621 | 4.8e-181 | |
| TAIR|locus:2093571 | 508 | AT3G26140 [Arabidopsis thalian | 0.868 | 0.974 | 0.594 | 7.6e-167 | |
| TAIR|locus:2093551 | 551 | AT3G26130 [Arabidopsis thalian | 0.908 | 0.940 | 0.569 | 1.6e-164 | |
| TAIR|locus:2157482 | 526 | AT5G17500 [Arabidopsis thalian | 0.871 | 0.944 | 0.578 | 2.1e-157 | |
| TAIR|locus:2149005 | 488 | AT5G16700 [Arabidopsis thalian | 0.589 | 0.688 | 0.585 | 2.5e-136 | |
| UNIPROTKB|G4N8V8 | 423 | MGG_03374 "Beta-1,6-galactanas | 0.615 | 0.829 | 0.309 | 7.1e-45 | |
| ASPGD|ASPL0000037062 | 412 | AN9166 [Emericella nidulans (t | 0.392 | 0.543 | 0.383 | 1.5e-35 | |
| UNIPROTKB|G4MKY3 | 480 | MGG_05381 "Beta-1,6-galactanas | 0.382 | 0.454 | 0.324 | 2.2e-31 | |
| UNIPROTKB|G4NBI5 | 411 | MGG_00530 "Endoglucanase E1" [ | 0.529 | 0.734 | 0.268 | 4.4e-21 |
| TAIR|locus:2031850 AT1G13130 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1757 (623.6 bits), Expect = 4.8e-181, P = 4.8e-181
Identities = 318/512 (62%), Positives = 397/512 (77%)
Query: 29 QQSKPAIGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDM 88
Q + P + PLST+SRWIVDENG RVKL C NW SHL+PVVAEGLSKQP+D ++K++V+M
Sbjct: 25 QNTVPNMSYPLSTSSRWIVDENGLRVKLVCANWPSHLQPVVAEGLSKQPVDAVAKKIVEM 84
Query: 89 GFNCVRLTWPLYLATNDSLAS-LTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAV 147
GFNCVRLTWPL L TN++LA+ +TVRQSFQ LGL + I G Q+NNPSI+DLPLI+A++ V
Sbjct: 85 GFNCVRLTWPLDLMTNETLANNVTVRQSFQSLGLNDDIVGFQTNNPSIIDLPLIEAYKTV 144
Query: 148 VASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNV 207
V +LGNN+VMVILDNH++KPGWCC+N DGNGFFGDQ+F+P +W+ L KMA FNGV NV
Sbjct: 145 VTTLGNNDVMVILDNHLTKPGWCCANDDGNGFFGDQFFDPTVWVAALKKMAATFNGVSNV 204
Query: 208 VGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNL 267
VGMSLRNELRGPKQNV DW++YMQ GAEAVH+AN +VLVILSGL+FD DLSFVR++ V L
Sbjct: 205 VGMSLRNELRGPKQNVNDWFKYMQQGAEAVHSANNKVLVILSGLSFDADLSFVRSRPVKL 264
Query: 268 TFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADL 327
+FTGKLVFE HWY F+DG +W NPN +CGRV++ + G+LL QG+PLF+SEFG D
Sbjct: 265 SFTGKLVFELHWYSFSDGNSWAANNPNDICGRVLNRIGNGGGYLLNQGFPLFLSEFGIDE 324
Query: 328 RGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNS 387
RG N NDNRY C G AAE D DW+LW L GSYYLR+G +G+NEYYG+ D +W +RNS
Sbjct: 325 RGVNTNDNRYFGCLTGWAAENDVDWSLWALTGSYYLRQGKVGMNEYYGVLDSDWISVRNS 384
Query: 388 SFLERISSLQSPFRGPGVFETGLHKVIYHPATGLCVQRKSFLDP--LTLGPCTESEAWSY 445
SFL++IS LQSP +GPG T + +++HP TGLC+ R S DP LTLGPC SE WSY
Sbjct: 385 SFLQKISFLQSPLQGPGP-RTDAYNLVFHPLTGLCIVR-SLDDPKMLTLGPCNSSEPWSY 442
Query: 446 TPHKTISLKGAYFCLQAKHVGKPAKLG-IICTDCGSTWEIISDSKMHLSSKADNGTTVCL 504
T K + +K CLQ+ P + C+ GS W+ IS S+MHL+S N T++CL
Sbjct: 443 TK-KALRIKDQQLCLQSNGPKNPVTMTRTSCSTSGSKWQTISASRMHLASTTSNKTSLCL 501
Query: 505 DVDSSNTIVTNTCKCLSRDKTCDPASQWFKLV 536
DVD++N +V N CKCLS+DK+C+P SQWFK++
Sbjct: 502 DVDTANNVVANACKCLSKDKSCEPMSQWFKII 533
|
|
| TAIR|locus:2093571 AT3G26140 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1623 (576.4 bits), Expect = 7.6e-167, P = 7.6e-167
Identities = 300/505 (59%), Positives = 383/505 (75%)
Query: 38 PLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTW 97
PLSTNSRWI+DE G RVKLACVNW SHL+PVVAEGLSKQ +D L+K+++ MGFNCVR TW
Sbjct: 4 PLSTNSRWIIDEKGQRVKLACVNWPSHLQPVVAEGLSKQSVDDLAKKIMAMGFNCVRFTW 63
Query: 98 PLYLATNDSLAS-LTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156
PL LATN++LA+ +TVRQSFQ LGL + I G ++ NPS++DLPLI+A++ VVA LGNNNV
Sbjct: 64 PLDLATNETLANNVTVRQSFQSLGLNDDISGFETKNPSMIDLPLIEAYKKVVAKLGNNNV 123
Query: 157 MVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNEL 216
MVILDNH++KPGWCC +DGNGFFGD +F+P WI GLTK+A F G NVVGMSLRNEL
Sbjct: 124 MVILDNHVTKPGWCCGYNDGNGFFGDTFFDPTTWIAGLTKIAMTFKGATNVVGMSLRNEL 183
Query: 217 RGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFE 276
RGPKQNV DW++YMQ GAEAVH ANP VLVILSGL++D DLSFVR++ VNLTFT KLVFE
Sbjct: 184 RGPKQNVDDWFKYMQQGAEAVHEANPNVLVILSGLSYDTDLSFVRSRHVNLTFTRKLVFE 243
Query: 277 AHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNR 336
H Y FT+ W NPN+ CG ++ ++ GF L +P+F+SEFG DLRG NVNDNR
Sbjct: 244 LHRYSFTNTNTWSSKNPNEACGEILKSIENGGGFNLRD-FPVFLSEFGIDLRGKNVNDNR 302
Query: 337 YLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLERISSL 396
Y+ C G AAE D DW++WTL GSYYLREGV+G++E+YG+ D +W +R+ SFL+R+S +
Sbjct: 303 YIGCILGWAAENDVDWSIWTLQGSYYLREGVVGMSEFYGILDSDWVRVRSQSFLQRLSLI 362
Query: 397 QSPFRGPGVFETGLHKVIYHPATGLCVQRKSFLDP--LTLGPCTESEAWSYTPHKTISLK 454
SP +GPG ++ ++ +++HP TGLC+ + S LDP +TLG C ES+ WSYTP T++LK
Sbjct: 363 LSPLQGPGS-QSKVYNLVFHPLTGLCMLQ-SILDPTKVTLGLCNESQPWSYTPQNTLTLK 420
Query: 455 GAYFCLQAKHVGKPAKLG-IICTDCG-STWEIISDSKMHLSSKADNGTTVCLDVDSSNTI 512
CL++ P KL C+ S WE IS S M L++K+ N + +CLDVD +N +
Sbjct: 421 DKSLCLESTGPNAPVKLSETSCSSPNLSEWETISASNMLLAAKSTNNS-LCLDVDETNNL 479
Query: 513 VTNTCKCLS-RDKTCDPASQWFKLV 536
+ + CKC+ D +CDP SQWFK+V
Sbjct: 480 MASNCKCVKGEDSSCDPISQWFKIV 504
|
|
| TAIR|locus:2093551 AT3G26130 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1601 (568.6 bits), Expect = 1.6e-164, P = 1.6e-164
Identities = 305/536 (56%), Positives = 393/536 (73%)
Query: 38 PLSTNSRWIVDEN--GHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL 95
P ST+SRWIVD+ G RVKL CVNW SHLE VAEGLSKQP+D +++++V MGFNCVRL
Sbjct: 22 PPSTDSRWIVDDGNKGRRVKLTCVNWPSHLETAVAEGLSKQPLDAIAEKIVSMGFNCVRL 81
Query: 96 TWPLYLATNDSLAS-LTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154
TWPLYLAT++S ++ +TVRQS +K L EA+ G Q++NP+I+DLPLIKAFQ VV L +
Sbjct: 82 TWPLYLATDESFSAFMTVRQSLRKFRLFEAVSGFQTHNPTILDLPLIKAFQEVVYCLEKH 141
Query: 155 NVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVR-NVVGMSLR 213
VMVILDNHIS+PGWCCS++DGNGFFGD++ NP +WIKGL KMA++F V NVVGMSLR
Sbjct: 142 RVMVILDNHISQPGWCCSDNDGNGFFGDKHLNPQVWIKGLKKMASMFANVSSNVVGMSLR 201
Query: 214 NELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKL 273
NELRGPKQN+KDWY+YM+ GAEAVH+ NP VLVI+SGLN+ DLSF+R + ++F K+
Sbjct: 202 NELRGPKQNIKDWYKYMREGAEAVHSVNPNVLVIVSGLNYATDLSFLRERPFEVSFRRKV 261
Query: 274 VFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVN 333
VFE HWYGF + W N N++CG+ + +M++SGFLLE+G PLFVSEFG D RGNN N
Sbjct: 262 VFEIHWYGFWN--TWEGDNLNKICGKETEKMMKMSGFLLEKGIPLFVSEFGIDQRGNNAN 319
Query: 334 DNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLERI 393
DN++L+CF +AA+ D DW+LWTL GSYY+RE IG +E YG+ D+NW IRNS+ L+ I
Sbjct: 320 DNKFLSCFMALAADRDLDWSLWTLAGSYYIREKSIGSDESYGVLDFNWSSIRNSTILQMI 379
Query: 394 SSLQSPFRGPGVFETGLHKVIYHPATGLCVQRKSFLDPLTLGPCTESEAWSYTPHKTISL 453
S++Q+PF G + ET K+++HP+TGLC+ RKS L LG C SE+W + H+ +SL
Sbjct: 380 SAIQTPFIG--LMETQPKKIMFHPSTGLCIVRKSLFQ-LKLGSCNRSESWRLSSHRVLSL 436
Query: 454 -KGAYFCLQAKHVGKPAKLGIICTD--CGSTWEIISDSKMHLSSKADNGTTVCLDVDS-S 509
+ CL+A GK KL + ++ C S W++ SDSKM LSS NG +VCLDVD+ +
Sbjct: 437 AEEQILCLKAYEKGKSVKLRLFFSESYC-SKWKLFSDSKMQLSSITKNGFSVCLDVDTEN 495
Query: 510 NTIVTNTCKCLSRDKTCDPASQWFKLVDXXXXXXXXXXFFQFNPILDLPGKDFIWK 565
N IVTN+CKCL + +CDP SQWFKLV F Q + L K F+ K
Sbjct: 496 NNIVTNSCKCLRGNSSCDPRSQWFKLVTSTRRRSRPKPFLQ----ISLYSKTFLQK 547
|
|
| TAIR|locus:2157482 AT5G17500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1534 (545.1 bits), Expect = 2.1e-157, P = 2.1e-157
Identities = 294/508 (57%), Positives = 359/508 (70%)
Query: 34 AIGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCV 93
A PL T SRWIV+ GHRVKLAC NW SHL+PVVAEGLS QPMD +SK++ DMGFNCV
Sbjct: 23 ATDYPLFTKSRWIVNNKGHRVKLACANWPSHLKPVVAEGLSSQPMDSISKKIKDMGFNCV 82
Query: 94 RLTWPLYLATNDSLA-SLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLG 152
RLTWPL L ND+LA ++TV+QSF++ GL + GI ++NP IV+ PLI FQAVV SLG
Sbjct: 83 RLTWPLELMINDTLAFNVTVKQSFERYGLDHELQGIYTHNPYIVNTPLINVFQAVVYSLG 142
Query: 153 NNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSL 212
++VMVILDNH + PGWCCSN D + FFGD FNPDLW+ GL KMATIF V+NVVGMSL
Sbjct: 143 RHDVMVILDNHKTVPGWCCSNDDPDAFFGDPKFNPDLWMLGLKKMATIFMNVKNVVGMSL 202
Query: 213 RNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGK 272
RNELRG KDWY+YMQ GAEAVH +NP VLVILSGLNFD DLSF++++ VNL+F K
Sbjct: 203 RNELRGYNHTSKDWYKYMQKGAEAVHTSNPNVLVILSGLNFDADLSFLKDRPVNLSFKKK 262
Query: 273 LVFEAHWYGFTDGQA-WVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN 331
LV E HWY FTDG W N N C ++ R GF+L+QG+PLF+SEFG D RG +
Sbjct: 263 LVLELHWYSFTDGTGQWKSHNVNDFCSQMFSKERRTGGFVLDQGFPLFLSEFGTDQRGGD 322
Query: 332 VNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLE 391
+ NRY+NC AAE D DWA+W + G YY REG G+ E YG+ D NW ++ N ++L
Sbjct: 323 LEGNRYMNCMLAWAAEKDLDWAVWAVTGVYYFREGKRGVVEAYGMLDANWHNVHNYTYLR 382
Query: 392 RISSLQSPFRGPGVFETGLHKVIYHPATGLCVQRKSFL--DPLTLGPCTESEAWSYTPHK 449
R+S +Q P GPGV + HK I+HP TGLC+ RKS LTLGPCT+ E WSY+
Sbjct: 383 RLSVIQPPHTGPGV-KHNHHKKIFHPLTGLCLVRKSHCHESELTLGPCTKDEPWSYSHGG 441
Query: 450 TISLK-GAYFCLQAKH-VGKPAKLGIICTDCGSTWEIISDSKMHLSSKADNGTTVCLDVD 507
+ ++ G CL+ + VGK KLG ICT E IS +KMHLS +G+ VCLDVD
Sbjct: 442 ILEIRRGHKSCLEGETAVGKSVKLGRICTKI----EQISATKMHLSFNTSDGSLVCLDVD 497
Query: 508 SSNTIVTNTCKCLSRDKTCDPASQWFKL 535
S N +V N+C CL+ D TC+PASQWFK+
Sbjct: 498 SDNNVVANSCNCLTGDTTCEPASQWFKI 525
|
|
| TAIR|locus:2149005 AT5G16700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1082 (385.9 bits), Expect = 2.5e-136, Sum P(2) = 2.5e-136
Identities = 198/338 (58%), Positives = 255/338 (75%)
Query: 31 SKPAIGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGF 90
SK PLST SRWIVDE G RVKLACVNW +HL+P VAEGLSKQP+D +SK++V MGF
Sbjct: 18 SKLTTSYPLSTKSRWIVDEKGQRVKLACVNWPAHLQPTVAEGLSKQPLDSISKKIVSMGF 77
Query: 91 NCVRLTWPLYLATNDSLA-SLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVA 149
NCVRLTWPL L TND+LA +TV+QSF+ L L E + GIQ++NP ++ LPL AFQ VV+
Sbjct: 78 NCVRLTWPLDLVTNDTLALKVTVKQSFESLKLFEDVLGIQTHNPKLLHLPLFNAFQEVVS 137
Query: 150 SLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVG 209
+LG N VMVILDNH++ PGWCC ++D + FFG +F+P +W KGL KMAT+F +V+G
Sbjct: 138 NLGENGVMVILDNHLTTPGWCCGDNDLDAFFGYPHFDPLVWAKGLRKMATLFRNFTHVIG 197
Query: 210 MSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTF 269
MSLRNE RG + W+R+M GAEAVHAANP++LVILSG++FD +LSF+R+++VN++F
Sbjct: 198 MSLRNEPRGARDYPDLWFRHMPQGAEAVHAANPKLLVILSGIDFDTNLSFLRDRSVNVSF 257
Query: 270 TGKLVFEAHWYGFTDGQ-AWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLR 328
T KLVFE HWY F+DG+ +W N N C ++++ V GFLL +G+PL +SEFG D R
Sbjct: 258 TDKLVFELHWYSFSDGRDSWRKHNSNDFCVKIIEKVTHNGGFLLGRGFPLILSEFGTDQR 317
Query: 329 GNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREG 366
G +++ NRY+NC AAE D DWA+W L G YYLR G
Sbjct: 318 GGDMSGNRYMNCLVAWAAENDLDWAVWALTGDYYLRTG 355
|
|
| UNIPROTKB|G4N8V8 MGG_03374 "Beta-1,6-galactanase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 118/381 (30%), Positives = 192/381 (50%)
Query: 38 PLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTW 97
P + RW D + + V A +NW H E ++ EGL Q ++ ++ ++ +G N VRLT+
Sbjct: 36 PFHVDGRWTKDASNNTVTFAGINWPGHGEVMIPEGLQYQSIEFIASKIKSIGMNAVRLTF 95
Query: 98 PLYLAT---NDSLASLTVRQSF-QKLGL---LEAIGGIQSNNPSIVDLPL-IKAFQAVVA 149
+ + ++ + + ++F Q LG + + + NP ++ + AV A
Sbjct: 96 AIEMVDQIYDNGGTDIPLDKAFTQGLGQDNGTKILNQFLAKNPQFTAKSTRLQVYDAVAA 155
Query: 150 SLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVG 209
L + ++LDNHIS WCC DGN F+GD F+ DLW++GL MA + +
Sbjct: 156 ELARQQIHIVLDNHISTGKWCCGADDGNAFWGDTQFSADLWVRGLEYMAKHGKKWQALTS 215
Query: 210 MSLRNELRGP--------KQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLS-FV 260
MSLRNE R P N + WY YM+ GA AVHAAN +VLV LSGLN+D ++ V
Sbjct: 216 MSLRNEPRTPAAGSPALNNYNWQSWYEYMKRGANAVHAANADVLVFLSGLNYDTYMTPVV 275
Query: 261 RNQAVNLTFTGKLVFE--AHWYGFTDGQAWVDGNPNQV--CGRVVDNVMRLSGF--LLEQ 314
R +A+ TGK F+ +W G + N C + +N+ +GF L +
Sbjct: 276 RGEALT-PGTGKFSFDDFPNW-GRDKLVVELHNYENSQGDCTNLQNNLYN-NGFQALTDP 332
Query: 315 G---WPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLN 371
+P+ ++E+G ++ N+ + Y C + +W + GSYY R+G
Sbjct: 333 SVTTFPVMLTEYGFNMMDNSWQ-SVYATCIAQYMPAQKASFFIWVVAGSYYTRQGTQDFE 391
Query: 372 EYYGLFDWNWCDIRNSSFLER 392
E +G+ + +W D RN +++E+
Sbjct: 392 ESWGVLNHDWSDWRNPTYVEQ 412
|
|
| ASPGD|ASPL0000037062 AN9166 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 92/240 (38%), Positives = 128/240 (53%)
Query: 34 AIGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCV 93
A+ PL+ + RWI+D G RV A VNW E ++ EGL + ++ +G N +
Sbjct: 22 ALNTPLTVSGRWILDSTGARVTFAGVNWPGAGEAMIPEGLQYASVASTISKIKSIGMNVI 81
Query: 94 RLTWPLYLATNDSLAS---LTVRQSFQK-LGLL---EAIGGIQSNNPSIVDLPL-IKAFQ 145
RLT+P+ L +D A+ TV S K LG+ + I +NNP I + ++ +
Sbjct: 82 RLTFPIELV-DDIYANDGDTTVLASLIKALGVTNGTDVFNQIVTNNPLITNTTTRMQVYD 140
Query: 146 AVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVR 205
V A +V V LDNHISK WCCS +DGN +FGD YF+ D W +GL MA+
Sbjct: 141 LVAAECAAQDVYVHLDNHISKAMWCCSTTDGNAWFGDTYFDVDNWKRGLQYMASHAASWE 200
Query: 206 NVVGMSLRNELRGPKQ-------NVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLS 258
+ LRNELR P N + WY M A+ V+AANP+ L+ LSGLN+D L+
Sbjct: 201 TFTSIGLRNELRQPASANPSYPYNWETWYSQMTEAADLVNAANPDALIFLSGLNYDTTLA 260
|
|
| UNIPROTKB|G4MKY3 MGG_05381 "Beta-1,6-galactanase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 308 (113.5 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 77/237 (32%), Positives = 119/237 (50%)
Query: 38 PLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTW 97
P ST R IVD G + LA VNW E ++ EGL Q + + R+ +GFN +R +
Sbjct: 57 PFSTRGRDIVDSRGEALTLAGVNWPMSGETMIPEGLEFQSAEEILDRIASVGFNVIRFGY 116
Query: 98 PLYLATN----DSLASLTVRQSFQKLGLLEAIGG-----IQSNNPS-IVDLPLIKAFQAV 147
+ D + ++ + LG A G I +NP + + +
Sbjct: 117 ATQMVDEIYERDG-EDVPLQVALASLG--HANGSRITHEILKHNPGWTTQTTRFELWGDI 173
Query: 148 VASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNV 207
+ + + I D H+ K WCCS+ DGN +FGD +F+ + W +GL+ +A NV
Sbjct: 174 LDAAAERGIYAIPDVHVHKAQWCCSHIDGNAWFGDVHFDVENWKRGLSYVAGWAKAHPNV 233
Query: 208 VGMSLRNELRGPKQNVKDWYRYMQL------GAEAVHAANPEVLVILSGLNFDKDLS 258
+G+SLRNELR +Y + L GA+A+HAANP++L+ SG+ +D+DLS
Sbjct: 234 LGLSLRNELRESWNRTDLYYNWQTLVGNMTAGADAIHAANPDLLITWSGMQYDQDLS 290
|
|
| UNIPROTKB|G4NBI5 MGG_00530 "Endoglucanase E1" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 270 (100.1 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 90/335 (26%), Positives = 147/335 (43%)
Query: 37 LPLSTNSRWIVDENGHRVKLACVNWVSHLEPV-VAEGLSKQPMDMLSKRVVDMGFNCVRL 95
LPLS R +VD G R KL+ VNW + + V GL Q D++++ + MGFN VRL
Sbjct: 58 LPLSAKGRDVVDSKGRRFKLSSVNWYGASDELFVPSGLDMQHRDVIAQTIRRMGFNSVRL 117
Query: 96 TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155
+ A +A+ + + + S NP ++ + F+AVV +L +
Sbjct: 118 PY----ADEMVIANPPI------------LPHLVSQNPDLIGRRALDVFEAVVTALTDAG 161
Query: 156 VMVILDNHISKPGWCCSNSDGNGFFGDQYFNP--------DLWIKGLTKMATIFNGVRNV 207
+ VI++NHI+ WCC + + + + P D WI + + F V
Sbjct: 162 IAVIINNHITHATWCCGADPCDAGWANDHLGPLCRVSQTEDDWIAHWETVMSRFTENPRV 221
Query: 208 VGMSLRNELRGPKQNVKDWYRYMQLG---AEAVHAANPEVLVILSGLNFDKDLSFVRNQA 264
+G LRNE+RG W R+ A + N + L+I+ G DL R++
Sbjct: 222 IGADLRNEVRGV-WGTMTWDRWATAAERCANRLLKMNSDWLMIVGGTESGNDLRGARDRP 280
Query: 265 VNLTFTGKLVFEAHWYGFTDGQAWVDGN-PNQVCGRVVDNVMRLSGFLLEQGW-PLFVSE 322
V L ++V+ AH Y ++ G +G + V ++ +L+E P++V E
Sbjct: 281 VRLDVDDRVVYSAHVYAWS-GWGSREGRYSKRPYPSFVASMRENWAYLVEGDVAPVWVGE 339
Query: 323 FGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTL 357
FGA + V D Y +D D+ W +
Sbjct: 340 FGAPAHPS-VGDANYWQNLMRYLKAIDADFGYWAI 373
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.451 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 570 545 0.00095 119 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 636 (68 KB)
Total size of DFA: 370 KB (2179 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.29u 0.13s 42.42t Elapsed: 00:00:02
Total cpu time: 42.29u 0.13s 42.42t Elapsed: 00:00:02
Start: Mon May 20 22:44:24 2013 End: Mon May 20 22:44:26 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 570 | |||
| pfam00150 | 269 | pfam00150, Cellulase, Cellulase (glycosyl hydrolas | 5e-11 | |
| cd00161 | 124 | cd00161, RICIN, Ricin-type beta-trefoil; Carbohydr | 7e-04 | |
| smart00458 | 118 | smart00458, RICIN, Ricin-type beta-trefoil | 9e-04 |
| >gnl|CDD|215751 pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5) | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 5e-11
Identities = 61/278 (21%), Positives = 98/278 (35%), Gaps = 48/278 (17%)
Query: 85 VVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSI-VDLPLIKA 143
V D GFN VRL P+ GG NNP +D +
Sbjct: 31 VKDWGFNVVRL--PVS------------------------WGGYVPNNPDYLIDENWLNR 64
Query: 144 FQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNG 203
VV +N + VI+D H + +GN +F LW T++AT +
Sbjct: 65 VDEVVDYAIDNGMYVIIDWHHD---TWPGDPNGNIDTAKAFFK-KLW----TQIATRYG- 115
Query: 204 VRNVVGMSLRNELRGPKQN--VKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVR 261
V L NE G D Y Q +A+ AA P L+I+ G ++ ++
Sbjct: 116 NNPNVIFELMNEPHGVDPATWDDDVKDYAQEAIDAIRAAGPNNLIIVGGPSWSQNPDGAA 175
Query: 262 NQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVS 321
+ L++ H+Y + G ++ + + + L+ G P+F+
Sbjct: 176 LN--DPNDDDNLIYSVHFYAPSHFSGTWFGCEDKTNLA--QRLRAAANYALDNGIPVFIG 231
Query: 322 EFGADLRGNNVND--NRYLNCFFGVAAELDWDWALWTL 357
EFG D ++L+ E W W+
Sbjct: 232 EFGGGNADGPCRDEAEKWLDY----LKENGISWTGWSN 265
|
Length = 269 |
| >gnl|CDD|238092 cd00161, RICIN, Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 7e-04
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 19/113 (16%)
Query: 418 ATGLCVQRKSFLD--PLTLGPCTESEA---WSYTPHKTISLKGAYFCLQAKHVGKPAKLG 472
TGLC+ D P+ L PC + W+ T TI +K + CL +K+
Sbjct: 8 NTGLCLDVNGGSDGGPVQLYPCHGNGNNQKWTLTSDGTIRIKSSNLCLDVGGDAPGSKVR 67
Query: 473 II-CTDCGST--WEIISDSK-MHLSSKADNGTTVCLDVDSSNT----IVTNTC 517
+ C+ W D +L S CLDV NT ++ TC
Sbjct: 68 LYTCSGGSDNQRWTFNKDGTIRNLKSG------KCLDVKGGNTNGTNLILWTC 114
|
The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. Length = 124 |
| >gnl|CDD|214672 smart00458, RICIN, Ricin-type beta-trefoil | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 9e-04
Identities = 27/115 (23%), Positives = 40/115 (34%), Gaps = 19/115 (16%)
Query: 414 IYHPATGLCVQRKSFLDPLTLGPCTESEA---WSYTPHKTISLKGAYFCLQAKHVGKPAK 470
I TG C+ +P+ L C + W T I +K CL A +
Sbjct: 1 IISGNTGKCLDVNGNKNPVGLFDCHGTGGNQLWKLTSDGAIRIKDTDLCLTANG-NTGST 59
Query: 471 LGIICTDCGST-----WEIISDSKMHLSSKADNGTTVCLDVDSSNT---IVTNTC 517
+ + C T WE+ D + + CLDV NT ++ TC
Sbjct: 60 VTL--YSCDGTNDNQYWEVNKDGTIRNPD-----SGKCLDVKDGNTGTKVILWTC 107
|
Carbohydrate-binding domain formed from presumed gene triplication. Length = 118 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 570 | |||
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 100.0 | |
| COG2730 | 407 | BglC Endoglucanase [Carbohydrate transport and met | 99.92 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 99.52 | |
| PF02836 | 298 | Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM | 99.49 | |
| PF03198 | 314 | Glyco_hydro_72: Glucanosyltransferase; InterPro: I | 99.31 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 99.17 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 99.14 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 99.13 | |
| PRK10340 | 1021 | ebgA cryptic beta-D-galactosidase subunit alpha; R | 99.1 | |
| PRK09525 | 1027 | lacZ beta-D-galactosidase; Reviewed | 99.07 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 98.98 | |
| COG3867 | 403 | Arabinogalactan endo-1,4-beta-galactosidase [Carbo | 98.94 | |
| PF13204 | 289 | DUF4038: Protein of unknown function (DUF4038); PD | 98.9 | |
| COG3934 | 587 | Endo-beta-mannanase [Carbohydrate transport and me | 98.77 | |
| COG2723 | 460 | BglB Beta-glucosidase/6-phospho-beta-glucosidase/b | 98.37 | |
| smart00458 | 117 | RICIN Ricin-type beta-trefoil. Carbohydrate-bindin | 98.32 | |
| PRK09852 | 474 | cryptic 6-phospho-beta-glucosidase; Provisional | 98.32 | |
| PF12876 | 88 | Cellulase-like: Sugar-binding cellulase-like; Inte | 98.3 | |
| COG3250 | 808 | LacZ Beta-galactosidase/beta-glucuronidase [Carboh | 98.26 | |
| PRK15014 | 477 | 6-phospho-beta-glucosidase BglA; Provisional | 98.2 | |
| cd00161 | 124 | RICIN Ricin-type beta-trefoil; Carbohydrate-bindin | 98.18 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 98.18 | |
| PF00331 | 320 | Glyco_hydro_10: Glycosyl hydrolase family 10; Inte | 98.15 | |
| PF01229 | 486 | Glyco_hydro_39: Glycosyl hydrolases family 39; Int | 98.14 | |
| PRK09593 | 478 | arb 6-phospho-beta-glucosidase; Reviewed | 98.07 | |
| PLN03059 | 840 | beta-galactosidase; Provisional | 98.05 | |
| PRK13511 | 469 | 6-phospho-beta-galactosidase; Provisional | 98.01 | |
| TIGR01233 | 467 | lacG 6-phospho-beta-galactosidase. This enzyme is | 97.97 | |
| PRK09589 | 476 | celA 6-phospho-beta-glucosidase; Reviewed | 97.86 | |
| PLN02998 | 497 | beta-glucosidase | 97.85 | |
| PF00232 | 455 | Glyco_hydro_1: Glycosyl hydrolase family 1; InterP | 97.85 | |
| PF00652 | 124 | Ricin_B_lectin: Ricin-type beta-trefoil lectin dom | 97.85 | |
| PLN02814 | 504 | beta-glucosidase | 97.85 | |
| PLN02849 | 503 | beta-glucosidase | 97.79 | |
| COG1874 | 673 | LacA Beta-galactosidase [Carbohydrate transport an | 97.31 | |
| COG5309 | 305 | Exo-beta-1,3-glucanase [Carbohydrate transport and | 97.15 | |
| PF14200 | 105 | RicinB_lectin_2: Ricin-type beta-trefoil lectin do | 97.03 | |
| PF14587 | 384 | Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; P | 96.95 | |
| PF11790 | 239 | Glyco_hydro_cc: Glycosyl hydrolase catalytic core; | 96.88 | |
| COG3693 | 345 | XynA Beta-1,4-xylanase [Carbohydrate transport and | 96.88 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 96.83 | |
| smart00458 | 117 | RICIN Ricin-type beta-trefoil. Carbohydrate-bindin | 96.74 | |
| cd00161 | 124 | RICIN Ricin-type beta-trefoil; Carbohydrate-bindin | 96.66 | |
| PF00652 | 124 | Ricin_B_lectin: Ricin-type beta-trefoil lectin dom | 96.57 | |
| PF14200 | 105 | RicinB_lectin_2: Ricin-type beta-trefoil lectin do | 96.47 | |
| PLN02361 | 401 | alpha-amylase | 96.04 | |
| KOG0626 | 524 | consensus Beta-glucosidase, lactase phlorizinhydro | 95.91 | |
| PLN02784 | 894 | alpha-amylase | 95.84 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 95.69 | |
| KOG2230 | 867 | consensus Predicted beta-mannosidase [Carbohydrate | 95.68 | |
| COG5520 | 433 | O-Glycosyl hydrolase [Cell envelope biogenesis, ou | 95.64 | |
| PLN00196 | 428 | alpha-amylase; Provisional | 95.54 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 95.27 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 95.07 | |
| KOG0496 | 649 | consensus Beta-galactosidase [Carbohydrate transpo | 95.06 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 95.01 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 94.34 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 94.24 | |
| smart00642 | 166 | Aamy Alpha-amylase domain. | 94.2 | |
| PLN02447 | 758 | 1,4-alpha-glucan-branching enzyme | 94.06 | |
| PRK10785 | 598 | maltodextrin glucosidase; Provisional | 93.82 | |
| PF02055 | 496 | Glyco_hydro_30: O-Glycosyl hydrolase family 30; In | 93.78 | |
| KOG3736 | 578 | consensus Polypeptide N-acetylgalactosaminyltransf | 93.74 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 93.54 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 93.4 | |
| PRK09441 | 479 | cytoplasmic alpha-amylase; Reviewed | 93.18 | |
| PLN02960 | 897 | alpha-amylase | 93.16 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 93.09 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 93.07 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 92.95 | |
| KOG2233 | 666 | consensus Alpha-N-acetylglucosaminidase [Intracell | 92.5 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 91.28 | |
| COG1649 | 418 | Uncharacterized protein conserved in bacteria [Fun | 90.76 | |
| PF03662 | 319 | Glyco_hydro_79n: Glycosyl hydrolase family 79, N-t | 90.33 | |
| PLN02877 | 970 | alpha-amylase/limit dextrinase | 90.14 | |
| TIGR02102 | 1111 | pullulan_Gpos pullulanase, extracellular, Gram-pos | 90.09 | |
| COG0296 | 628 | GlgB 1,4-alpha-glucan branching enzyme [Carbohydra | 89.63 | |
| KOG3738 | 559 | consensus Predicted polypeptide N-acetylgalactosam | 88.22 | |
| TIGR02403 | 543 | trehalose_treC alpha,alpha-phosphotrehalase. Treha | 87.88 | |
| PRK10933 | 551 | trehalose-6-phosphate hydrolase; Provisional | 87.83 | |
| COG1523 | 697 | PulA Type II secretory pathway, pullulanase PulA a | 87.77 | |
| TIGR02456 | 539 | treS_nterm trehalose synthase. Trehalose synthase | 86.95 | |
| TIGR02100 | 688 | glgX_debranch glycogen debranching enzyme GlgX. Th | 85.96 | |
| PRK09505 | 683 | malS alpha-amylase; Reviewed | 85.29 | |
| PF01120 | 346 | Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 | 85.25 | |
| PRK03705 | 658 | glycogen debranching enzyme; Provisional | 84.95 | |
| PRK09997 | 258 | hydroxypyruvate isomerase; Provisional | 83.27 | |
| TIGR02103 | 898 | pullul_strch alpha-1,6-glucosidases, pullulanase-t | 80.59 | |
| KOG3736 | 578 | consensus Polypeptide N-acetylgalactosaminyltransf | 80.36 |
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=309.53 Aligned_cols=268 Identities=22% Similarity=0.359 Sum_probs=201.1
Q ss_pred EcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhcc
Q 008330 47 VDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIG 126 (570)
Q Consensus 47 Vd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~ 126 (570)
||.+|++|.++|+|..... ....+++++.|+++|||+||||+.+..+.+
T Consensus 1 ~~~~G~~v~~~G~n~~w~~---------~~~~~~~~~~~~~~G~n~VRi~v~~~~~~~---------------------- 49 (281)
T PF00150_consen 1 VDQNGKPVNWRGFNTHWYN---------PSITEADFDQLKALGFNTVRIPVGWEAYQE---------------------- 49 (281)
T ss_dssp ECTTSEBEEEEEEEETTSG---------GGSHHHHHHHHHHTTESEEEEEEESTSTST----------------------
T ss_pred CCCCCCeEEeeeeecccCC---------CCCHHHHHHHHHHCCCCEEEeCCCHHHhcC----------------------
Confidence 7999999999999975111 015789999999999999999999854331
Q ss_pred CcccCCCCC-CCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 008330 127 GIQSNNPSI-VDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVR 205 (570)
Q Consensus 127 g~~~~nP~~-~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p 205 (570)
.+|.. .+.+.+++|+++|++|.++||+||||+|.. |+|+... +. +.......+.+.++|+.||+|||+++
T Consensus 50 ----~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild~h~~-~~w~~~~---~~-~~~~~~~~~~~~~~~~~la~~y~~~~ 120 (281)
T PF00150_consen 50 ----PNPGYNYDETYLARLDRIVDAAQAYGIYVILDLHNA-PGWANGG---DG-YGNNDTAQAWFKSFWRALAKRYKDNP 120 (281)
T ss_dssp ----TSTTTSBTHHHHHHHHHHHHHHHHTT-EEEEEEEES-TTCSSST---ST-TTTHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred ----CCCCccccHHHHHHHHHHHHHHHhCCCeEEEEeccC-ccccccc---cc-cccchhhHHHHHhhhhhhccccCCCC
Confidence 12232 467899999999999999999999999997 5663221 11 11111124556789999999999999
Q ss_pred cEEEEeccCCCCCCCCC-------hhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchh-hhhcccCcCCCCCEEEEE
Q 008330 206 NVVGMSLRNELRGPKQN-------VKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSF-VRNQAVNLTFTGKLVFEA 277 (570)
Q Consensus 206 ~Vig~dL~NEP~~~~~~-------~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~-~~~~p~~l~~~~nlVys~ 277 (570)
.|++|||+|||+..... ...|.+++++++++||+++|+++|++++..|+.+... ....|. ..++++||++
T Consensus 121 ~v~~~el~NEP~~~~~~~~w~~~~~~~~~~~~~~~~~~Ir~~~~~~~i~~~~~~~~~~~~~~~~~~P~--~~~~~~~~~~ 198 (281)
T PF00150_consen 121 PVVGWELWNEPNGGNDDANWNAQNPADWQDWYQRAIDAIRAADPNHLIIVGGGGWGADPDGAAADNPN--DADNNDVYSF 198 (281)
T ss_dssp TTEEEESSSSGCSTTSTTTTSHHHTHHHHHHHHHHHHHHHHTTSSSEEEEEEHHHHTBHHHHHHHSTT--TTTTSEEEEE
T ss_pred cEEEEEecCCccccCCccccccccchhhhhHHHHHHHHHHhcCCcceeecCCCccccccchhhhcCcc--cccCceeEEe
Confidence 99999999999886321 2678899999999999999999999999888877665 444552 1358999999
Q ss_pred eecCCCCC-CCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCCceEEec
Q 008330 278 HWYGFTDG-QAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWT 356 (570)
Q Consensus 278 H~Y~~~~~-~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gigw~~W~ 356 (570)
|.|.+..+ ..+... .......+...+.....++.+.+.||+|||||....+.. ....+...++++++++++||++|+
T Consensus 199 H~Y~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~pv~~gE~G~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~W~ 276 (281)
T PF00150_consen 199 HFYDPYDFSDQWNPG-NWGDASALESSFRAALNWAKKNGKPVVVGEFGWSNNDGN-GSTDYADAWLDYLEQNGIGWIYWS 276 (281)
T ss_dssp EEETTTCHHTTTSTC-SHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSTTTSC-HHHHHHHHHHHHHHHTTCEEEECE
T ss_pred eEeCCCCcCCccccc-cchhhhHHHHHHHHHHHHHHHcCCeEEEeCcCCcCCCCC-cCHHHHHHHHHHHHHCCCeEEEEe
Confidence 99997654 222210 011122344555666666777899999999999855433 346777888999999999999999
Q ss_pred cC
Q 008330 357 LV 358 (570)
Q Consensus 357 ~~ 358 (570)
|+
T Consensus 277 ~~ 278 (281)
T PF00150_consen 277 WK 278 (281)
T ss_dssp ES
T ss_pred cC
Confidence 97
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A .... |
| >COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=233.39 Aligned_cols=258 Identities=19% Similarity=0.274 Sum_probs=169.3
Q ss_pred EcCCCCEEEEEEeeCCCCCCc-cccCCCCCChH-----HHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhcc
Q 008330 47 VDENGHRVKLACVNWVSHLEP-VVAEGLSKQPM-----DMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLG 120 (570)
Q Consensus 47 Vd~~G~~v~L~GVNw~g~~~~-~v~~Gl~~~~~-----~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg 120 (570)
++....+..+.+++|+|.+.. ...+|++.... +++++.|+++|||+||||+.++.+.. .
T Consensus 38 ~~~~~~~~~~~~~~~~g~~lg~~~~~~~~~~~w~~~~~~~~~~~ik~~G~n~VRiPi~~~~~~~--~------------- 102 (407)
T COG2730 38 TDPKESPGQLVGVSWFGLNLGNHLAQGLLESHWGNFITEEDFDQIKSAGFNAVRIPIGYWALQA--T------------- 102 (407)
T ss_pred cCCCCCcceeecccccceecCchhhcccchhccchhhhhhHHHHHHHcCCcEEEcccchhhhhc--c-------------
Confidence 566778899999999998743 24556655444 89999999999999999999875521 0
Q ss_pred chhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCC-CCCCCCCCCCHHHHHHHHHHHHH
Q 008330 121 LLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDG-NGFFGDQYFNPDLWIKGLTKMAT 199 (570)
Q Consensus 121 ~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dg-ng~~~d~~~~~~~~~~~w~~iA~ 199 (570)
...||.+.+.+.+..++++|++|.++||||+||+|..+++..|....+ ...|.....+.+++++.|++||.
T Consensus 103 --------~~~~p~~~~~~~~~~ld~~I~~a~~~gi~V~iD~H~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~w~~ia~ 174 (407)
T COG2730 103 --------DGDNPYLIGLTQLKILDEAINWAKKLGIYVLIDLHGYPGGNNGHEHSGYTSDYKEENENVEATIDIWKFIAN 174 (407)
T ss_pred --------CCCCCCeecchHHHHHHHHHHHHHhcCeeEEEEecccCCCCCCcCcccccccccccchhHHHHHHHHHHHHH
Confidence 015888886677779999999999999999999999976554433222 12233333446899999999999
Q ss_pred HhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHH----HhcCCCcEEEEeCCCCCC---------------cchhh
Q 008330 200 IFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAV----HAANPEVLVILSGLNFDK---------------DLSFV 260 (570)
Q Consensus 200 ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aI----r~~dp~~lIiVeG~~w~~---------------dl~~~ 260 (570)
||++.++|+|||++|||++. ...+.|..+..++++.| .+..|..+|.++|..+.. .....
T Consensus 175 ~f~~~~~VIg~~~~NEP~~~-~~~~~w~~~~~~A~~~v~~~i~~~~~~~~I~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (407)
T COG2730 175 RFKNYDTVIGFELINEPNGI-VTSETWNGGDDEAYDVVRNAILSNAPHWLIRVGGQGLNGWRVIMAHTYGSSDGGNDNGV 253 (407)
T ss_pred hccCCCceeeeeeecCCccc-CCccccccchHHHHHHHHhhhhhcCceEEEEECcccccCCeeeccCCCccccccccCCc
Confidence 99999999999999999961 12234544444555555 344555588888764432 01111
Q ss_pred hhcccCcC--CCCCEEEEEeecCCCCC--CCCCCCCCcchhhHHHHHHHHHHHH-HHhcCCCeEEeccccCCC
Q 008330 261 RNQAVNLT--FTGKLVFEAHWYGFTDG--QAWVDGNPNQVCGRVVDNVMRLSGF-LLEQGWPLFVSEFGADLR 328 (570)
Q Consensus 261 ~~~p~~l~--~~~nlVys~H~Y~~~~~--~~w~~~~~~~~~~~~~~~~~~~~g~-l~~~g~Pv~iGEFG~~~~ 328 (570)
...|++.+ ...+++|++|.|++... ..|...............+.+.+++ +...+.|+++||||....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ge~g~~~~ 326 (407)
T COG2730 254 YIVPVDDPGLTANKHLYAPHVYGDDVLNGGSWTVGGEFDLAETDCAIWLNYVGHGARKNGYPTVIGEFGGNYN 326 (407)
T ss_pred eeeeccchhhhccceeccceeecchhhcCCCCCccCCcccccccceeeecceeecccccceeeeeccccCccc
Confidence 11222222 24688999999986643 2343210000011111111222221 124889999999999884
|
|
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.7e-12 Score=143.45 Aligned_cols=277 Identities=13% Similarity=0.120 Sum_probs=155.3
Q ss_pred eEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhh
Q 008330 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQK 118 (570)
Q Consensus 39 L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~ 118 (570)
++++++.|. -+|++|+|||+|+.... +....+.....+..+++.||++|+|+||+.... .
T Consensus 278 i~~~~~~f~-lNG~pv~lrG~~~h~~~-~~~G~a~~~~~~~~d~~l~K~~G~N~vR~sh~p---------~--------- 337 (604)
T PRK10150 278 VAVKGGQFL-INGKPFYFKGFGKHEDA-DIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYP---------Y--------- 337 (604)
T ss_pred EEEeCCEEE-ECCEEEEEEeeeccCCC-CccCCcCCHHHHHHHHHHHHHCCCCEEEeccCC---------C---------
Confidence 344444332 39999999999974221 222223333345678899999999999993210 0
Q ss_pred ccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEec--CCCCCCccc-----cCCCCCCCCCCC---CCCHH
Q 008330 119 LGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDN--HISKPGWCC-----SNSDGNGFFGDQ---YFNPD 188 (570)
Q Consensus 119 lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~--H~~~~~w~~-----~~~dgng~~~d~---~~~~~ 188 (570)
=+++.+.|.+.||+|+-+. |... .|.. ...+. .-|... ....+
T Consensus 338 -------------------------~~~~~~~cD~~GllV~~E~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 390 (604)
T PRK10150 338 -------------------------SEEMLDLADRHGIVVIDETPAVGLN-LSFGAGLEAGNKPK-ETYSEEAVNGETQQ 390 (604)
T ss_pred -------------------------CHHHHHHHHhcCcEEEEeccccccc-cccccccccccccc-ccccccccchhHHH
Confidence 1357889999999999775 2110 0100 00000 001100 01245
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcC
Q 008330 189 LWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLT 268 (570)
Q Consensus 189 ~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~ 268 (570)
.+.+.++.|.+|++++|.|+++.+.||+.... ..-..+++++++.+|+.||.++|......... . .....
T Consensus 391 ~~~~~~~~mv~r~~NHPSIi~Ws~gNE~~~~~---~~~~~~~~~l~~~~k~~DptR~vt~~~~~~~~-~---~~~~~--- 460 (604)
T PRK10150 391 AHLQAIRELIARDKNHPSVVMWSIANEPASRE---QGAREYFAPLAELTRKLDPTRPVTCVNVMFAT-P---DTDTV--- 460 (604)
T ss_pred HHHHHHHHHHHhccCCceEEEEeeccCCCccc---hhHHHHHHHHHHHHHhhCCCCceEEEecccCC-c---ccccc---
Confidence 56778899999999999999999999986532 23445667888999999999999987632110 0 00000
Q ss_pred CCCCEEEEEeecCCCCCCCCCCCCC--cchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCC------C---C-cchHH
Q 008330 269 FTGKLVFEAHWYGFTDGQAWVDGNP--NQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRG------N---N-VNDNR 336 (570)
Q Consensus 269 ~~~nlVys~H~Y~~~~~~~w~~~~~--~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~------~---~-~~~~~ 336 (570)
.+---|+++|.|.. |..... ...-..+...+.+ +....+.|++++|||+.... + + +....
T Consensus 461 ~~~~Dv~~~N~Y~~-----wy~~~~~~~~~~~~~~~~~~~---~~~~~~kP~~isEyg~~~~~~~h~~~~~~~~ee~q~~ 532 (604)
T PRK10150 461 SDLVDVLCLNRYYG-----WYVDSGDLETAEKVLEKELLA---WQEKLHKPIIITEYGADTLAGLHSMYDDMWSEEYQCA 532 (604)
T ss_pred cCcccEEEEcccce-----ecCCCCCHHHHHHHHHHHHHH---HHHhcCCCEEEEccCCccccccccCCCCCCCHHHHHH
Confidence 01234788887642 111100 0000111112211 11113799999999964311 0 1 11234
Q ss_pred HHHHHHHHHHHCC--CceEEeccCceeecccC-ccCCCceeeeecCCC
Q 008330 337 YLNCFFGVAAELD--WDWALWTLVGSYYLREG-VIGLNEYYGLFDWNW 381 (570)
Q Consensus 337 ~~~~~~~~~~~~g--igw~~W~~~G~y~~r~~-~~~~~et~Gll~~dw 381 (570)
+++...+.++++. +|-+.|++.. |....+ ....++..||++.|.
T Consensus 533 ~~~~~~~~~~~~p~~~G~~iW~~~D-~~~~~g~~~~~g~~~Gl~~~dr 579 (604)
T PRK10150 533 FLDMYHRVFDRVPAVVGEQVWNFAD-FATSQGILRVGGNKKGIFTRDR 579 (604)
T ss_pred HHHHHHHHHhcCCceEEEEEEeeec-cCCCCCCcccCCCcceeEcCCC
Confidence 5666666666554 4777887642 111011 112346789999884
|
|
| >PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.9e-12 Score=132.65 Aligned_cols=157 Identities=17% Similarity=0.127 Sum_probs=97.8
Q ss_pred EecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhc
Q 008330 40 STNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKL 119 (570)
Q Consensus 40 ~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~l 119 (570)
.++++.|. -+|++++|||||+.... +..........++.++..||++|||+||+.-...
T Consensus 2 ev~~~~~~-lNGk~~~l~Gv~~h~~~-~~~g~a~~~~~~~~d~~l~k~~G~N~iR~~h~p~------------------- 60 (298)
T PF02836_consen 2 EVKDGGFY-LNGKPIFLRGVNRHQDY-PGLGRAMPDEAMERDLELMKEMGFNAIRTHHYPP------------------- 60 (298)
T ss_dssp EEETTEEE-ETTEEE-EEEEEE-S-B-TTTBT---HHHHHHHHHHHHHTT-SEEEETTS---------------------
T ss_pred EEECCEEE-ECCEEEEEEEEeeCcCc-ccccccCCHHHHHHHHHHHHhcCcceEEcccccC-------------------
Confidence 45555543 39999999999976432 1111112223467788999999999999822110
Q ss_pred cchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 008330 120 GLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMA 198 (570)
Q Consensus 120 g~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA 198 (570)
-.++++.|.+.||+|+.++-... +.|.... ..+....+. ...+.+.+-++.+.
T Consensus 61 ------------------------~~~~~~~cD~~GilV~~e~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~v 114 (298)
T PF02836_consen 61 ------------------------SPRFYDLCDELGILVWQEIPLEGHGSWQDFG-NCNYDADDP-EFRENAEQELREMV 114 (298)
T ss_dssp ------------------------SHHHHHHHHHHT-EEEEE-S-BSCTSSSSTS-CTSCTTTSG-GHHHHHHHHHHHHH
T ss_pred ------------------------cHHHHHHHhhcCCEEEEeccccccCccccCC-ccccCCCCH-HHHHHHHHHHHHHH
Confidence 14577889999999998864311 1121000 000000111 12456778899999
Q ss_pred HHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCC
Q 008330 199 TIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGL 251 (570)
Q Consensus 199 ~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~ 251 (570)
.|++++|.|+.+.+.||+ ....+++++.+.+|+.||.++|.....
T Consensus 115 ~~~~NHPSIi~W~~gNE~--------~~~~~~~~l~~~~k~~DptRpv~~~~~ 159 (298)
T PF02836_consen 115 RRDRNHPSIIMWSLGNES--------DYREFLKELYDLVKKLDPTRPVTYASN 159 (298)
T ss_dssp HHHTT-TTEEEEEEEESS--------HHHHHHHHHHHHHHHH-TTSEEEEETG
T ss_pred HcCcCcCchheeecCccC--------ccccchhHHHHHHHhcCCCCceeeccc
Confidence 999999999999999999 344556788899999999999988765
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A .... |
| >PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.4e-10 Score=116.50 Aligned_cols=163 Identities=14% Similarity=0.179 Sum_probs=88.9
Q ss_pred CCCCCeEecCCeEEc-CCCCEEEEEEeeCCCCCCccccCCCCC----ChHHHHHHHHHHcCCcEEEecccccccccCccc
Q 008330 34 AIGLPLSTNSRWIVD-ENGHRVKLACVNWVSHLEPVVAEGLSK----QPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLA 108 (570)
Q Consensus 34 ~~~~~L~t~G~~IVd-~~G~~v~L~GVNw~g~~~~~v~~Gl~~----~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~ 108 (570)
+...|+.++|++|.+ ++|++|.+|||.+............++ .--+.++..|+++|+|+||+ .+
T Consensus 6 ~~~~pI~ikG~kff~~~~g~~F~ikGVaYQp~~~~~~~~~~DPLad~~~C~rDi~~l~~LgiNtIRV-Y~---------- 74 (314)
T PF03198_consen 6 AAVPPIEIKGNKFFYSKNGTRFFIKGVAYQPGGSSEPSNYIDPLADPEACKRDIPLLKELGINTIRV-YS---------- 74 (314)
T ss_dssp TTS--EEEETTEEEETTT--B--EEEEE----------SS--GGG-HHHHHHHHHHHHHHT-SEEEE-S-----------
T ss_pred ccCCCEEEECCEeEECCCCCEEEEeeEEcccCCCCCCccCcCcccCHHHHHHhHHHHHHcCCCEEEE-EE----------
Confidence 344689999999997 799999999999753221100001110 11356788999999999998 11
Q ss_pred cchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHH
Q 008330 109 SLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPD 188 (570)
Q Consensus 109 n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~ 188 (570)
.+|.. -.|++++.+.+.|||||||+-... ++-....+ + ..++ .
T Consensus 75 ----------------------vdp~~-------nHd~CM~~~~~aGIYvi~Dl~~p~----~sI~r~~P-~--~sw~-~ 117 (314)
T PF03198_consen 75 ----------------------VDPSK-------NHDECMSAFADAGIYVILDLNTPN----GSINRSDP-A--PSWN-T 117 (314)
T ss_dssp ------------------------TTS---------HHHHHHHHHTT-EEEEES-BTT----BS--TTS----------H
T ss_pred ----------------------eCCCC-------CHHHHHHHHHhCCCEEEEecCCCC----ccccCCCC-c--CCCC-H
Confidence 12222 268999999999999999997652 11111111 0 0122 3
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCC--ChhHHHH-HHHHHHHHHHhcCCCc
Q 008330 189 LWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQ--NVKDWYR-YMQLGAEAVHAANPEV 244 (570)
Q Consensus 189 ~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~--~~~~W~~-~~~~~~~aIr~~dp~~ 244 (570)
...+....+...|+.++|++||-.-||-..... ....+.+ +++.+-+.|++.+.+.
T Consensus 118 ~l~~~~~~vid~fa~Y~N~LgFf~GNEVin~~~~t~aap~vKAavRD~K~Yi~~~~~R~ 176 (314)
T PF03198_consen 118 DLLDRYFAVIDAFAKYDNTLGFFAGNEVINDASNTNAAPYVKAAVRDMKAYIKSKGYRS 176 (314)
T ss_dssp HHHHHHHHHHHHHTT-TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS--
T ss_pred HHHHHHHHHHHHhccCCceEEEEecceeecCCCCcccHHHHHHHHHHHHHHHHhcCCCC
Confidence 456677889999999999999999999864321 2233433 3444444466666543
|
It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A. |
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.3e-09 Score=115.20 Aligned_cols=137 Identities=11% Similarity=0.088 Sum_probs=98.9
Q ss_pred hHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 77 PMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
..+++++.|+++|||++|++++|..+.++. +.-.+...++.++.+|++|.++||
T Consensus 55 ~y~eDi~l~~~~G~~~~R~si~Wsri~p~g--------------------------~~~~n~~~~~~y~~~i~~l~~~gi 108 (427)
T TIGR03356 55 RYEEDVALMKELGVDAYRFSIAWPRIFPEG--------------------------TGPVNPKGLDFYDRLVDELLEAGI 108 (427)
T ss_pred hHHHHHHHHHHcCCCeEEcccchhhcccCC--------------------------CCCcCHHHHHHHHHHHHHHHHcCC
Confidence 368999999999999999999998765520 011356789999999999999999
Q ss_pred EEEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCC-------------CC
Q 008330 157 MVILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPK-------------QN 222 (570)
Q Consensus 157 ~VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~-------------~~ 222 (570)
.+|+++|+.. |.|... ..||.+.. ..+.|.++++.+++||++... -+.++|||.... .+
T Consensus 109 ~pivtL~Hfd~P~~l~~---~gGw~~~~--~~~~f~~ya~~~~~~~~d~v~--~w~t~NEp~~~~~~~y~~G~~~P~~~~ 181 (427)
T TIGR03356 109 EPFVTLYHWDLPQALED---RGGWLNRD--TAEWFAEYAAVVAERLGDRVK--HWITLNEPWCSAFLGYGLGVHAPGLRD 181 (427)
T ss_pred eeEEeeccCCccHHHHh---cCCCCChH--HHHHHHHHHHHHHHHhCCcCC--EEEEecCcceecccchhhccCCCCCcc
Confidence 9999998754 544321 23555432 368999999999999999643 358999997321 01
Q ss_pred hh-HH------HHHHHHHHHHHHhcCCCcEE
Q 008330 223 VK-DW------YRYMQLGAEAVHAANPEVLV 246 (570)
Q Consensus 223 ~~-~W------~~~~~~~~~aIr~~dp~~lI 246 (570)
.. .+ .....++++++|+..|+..|
T Consensus 182 ~~~~~~~~hnll~Aha~A~~~~~~~~~~~~I 212 (427)
T TIGR03356 182 LRAALQAAHHLLLAHGLAVQALRANGPGAQV 212 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 11 11 12335788889998887443
|
|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.4e-09 Score=113.34 Aligned_cols=119 Identities=18% Similarity=0.280 Sum_probs=78.1
Q ss_pred cCCCCCChHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHH
Q 008330 70 AEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVV 148 (570)
Q Consensus 70 ~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV 148 (570)
||-......+++++.|+++|||+||| .++|..+++. |... -+..||++|
T Consensus 4 pe~~~~e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~---------------------------eG~y---dF~~lD~~l 53 (374)
T PF02449_consen 4 PEQWPEEEWEEDLRLMKEAGFNTVRIGEFSWSWLEPE---------------------------EGQY---DFSWLDRVL 53 (374)
T ss_dssp GGGS-CCHHHHHHHHHHHHT-SEEEE-CCEHHHH-SB---------------------------TTB------HHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHcCCCEEEEEEechhhccCC---------------------------CCee---ecHHHHHHH
Confidence 44444466899999999999999998 4677666542 1112 356799999
Q ss_pred HHHhcCCCEEEEec-CCCCCCccccCC------CCCC---CCCCC---CCC----HHHHHHHHHHHHHHhCCCCcEEEEe
Q 008330 149 ASLGNNNVMVILDN-HISKPGWCCSNS------DGNG---FFGDQ---YFN----PDLWIKGLTKMATIFNGVRNVVGMS 211 (570)
Q Consensus 149 ~~a~~~Gl~VILD~-H~~~~~w~~~~~------dgng---~~~d~---~~~----~~~~~~~w~~iA~ryk~~p~Vig~d 211 (570)
+.|.++||+|||.. +...|.|..... +.++ -++.. .++ .+...++.+.|++||+++|+|+++.
T Consensus 54 ~~a~~~Gi~viL~~~~~~~P~Wl~~~~Pe~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~ 133 (374)
T PF02449_consen 54 DLAAKHGIKVILGTPTAAPPAWLYDKYPEILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQ 133 (374)
T ss_dssp HHHHCTT-EEEEEECTTTS-HHHHCCSGCCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEE
T ss_pred HHHHhccCeEEEEecccccccchhhhcccccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEE
Confidence 99999999999976 334466642110 1111 01111 112 3456778899999999999999999
Q ss_pred ccCCCCC
Q 008330 212 LRNELRG 218 (570)
Q Consensus 212 L~NEP~~ 218 (570)
+-|||..
T Consensus 134 i~NE~~~ 140 (374)
T PF02449_consen 134 IDNEPGY 140 (374)
T ss_dssp ECCSTTC
T ss_pred eccccCc
Confidence 9999966
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A. |
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.13 E-value=4e-09 Score=110.04 Aligned_cols=225 Identities=19% Similarity=0.225 Sum_probs=126.1
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
..+.++.||+.|+|.|||=+ +-+ |.-.+..-++...+..+.|+++||.
T Consensus 26 ~~d~~~ilk~~G~N~vRlRv----wv~----------------------------P~~~g~~~~~~~~~~akrak~~Gm~ 73 (332)
T PF07745_consen 26 EKDLFQILKDHGVNAVRLRV----WVN----------------------------PYDGGYNDLEDVIALAKRAKAAGMK 73 (332)
T ss_dssp B--HHHHHHHTT--EEEEEE-----SS-----------------------------TTTTTTSHHHHHHHHHHHHHTT-E
T ss_pred CCCHHHHHHhcCCCeEEEEe----ccC----------------------------CcccccCCHHHHHHHHHHHHHCCCe
Confidence 35789999999999999944 211 1111122356788888999999999
Q ss_pred EEEecCCCCCCccccCCC--CCCCCCCCCCCHHH----HHHHHHHHHHHhCCCCc-EEEEeccCCCCC-------CCCCh
Q 008330 158 VILDNHISKPGWCCSNSD--GNGFFGDQYFNPDL----WIKGLTKMATIFNGVRN-VVGMSLRNELRG-------PKQNV 223 (570)
Q Consensus 158 VILD~H~~~~~w~~~~~d--gng~~~d~~~~~~~----~~~~w~~iA~ryk~~p~-Vig~dL~NEP~~-------~~~~~ 223 (570)
|+||+|-++ .|...... +.. |.+. +.++ ..++=+.+-++++..-- +=.+.+-||-.. ...+.
T Consensus 74 vlldfHYSD-~WaDPg~Q~~P~a-W~~~--~~~~l~~~v~~yT~~vl~~l~~~G~~pd~VQVGNEin~Gmlwp~g~~~~~ 149 (332)
T PF07745_consen 74 VLLDFHYSD-FWADPGKQNKPAA-WANL--SFDQLAKAVYDYTKDVLQALKAAGVTPDMVQVGNEINNGMLWPDGKPSNW 149 (332)
T ss_dssp EEEEE-SSS-S--BTTB-B--TT-CTSS--SHHHHHHHHHHHHHHHHHHHHHTT--ESEEEESSSGGGESTBTTTCTT-H
T ss_pred EEEeecccC-CCCCCCCCCCCcc-CCCC--CHHHHHHHHHHHHHHHHHHHHHCCCCccEEEeCccccccccCcCCCccCH
Confidence 999999654 45322111 112 3221 2222 23344455666665421 224689999543 22456
Q ss_pred hHHHHHHHHHHHHHHhcCCCcEEEEeCCC-CCCc-----chhhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchh
Q 008330 224 KDWYRYMQLGAEAVHAANPEVLVILSGLN-FDKD-----LSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVC 297 (570)
Q Consensus 224 ~~W~~~~~~~~~aIr~~dp~~lIiVeG~~-w~~d-----l~~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~ 297 (570)
..+.++..++++|||+++|+..|+|--.+ .+.+ +..+...-++ --|+.+++|++... ..
T Consensus 150 ~~~a~ll~ag~~AVr~~~p~~kV~lH~~~~~~~~~~~~~f~~l~~~g~d-----~DviGlSyYP~w~~----------~l 214 (332)
T PF07745_consen 150 DNLAKLLNAGIKAVREVDPNIKVMLHLANGGDNDLYRWFFDNLKAAGVD-----FDVIGLSYYPFWHG----------TL 214 (332)
T ss_dssp HHHHHHHHHHHHHHHTHSSTSEEEEEES-TTSHHHHHHHHHHHHHTTGG------SEEEEEE-STTST-----------H
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEECCCCchHHHHHHHHHHHhcCCC-----cceEEEecCCCCcc----------hH
Confidence 66778889999999999999999985322 2211 1223333222 33889999996542 12
Q ss_pred hHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC---------------------cchHHHHHHHHHHHHH----CCCce
Q 008330 298 GRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN---------------------VNDNRYLNCFFGVAAE----LDWDW 352 (570)
Q Consensus 298 ~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~---------------------~~~~~~~~~~~~~~~~----~gigw 352 (570)
+++...+... ..+.+.||+|.|.|.+....+ +....|++++++.+.+ .|+|-
T Consensus 215 ~~l~~~l~~l---~~ry~K~V~V~Et~yp~t~~d~D~~~n~~~~~~~~~~yp~t~~GQ~~~l~~l~~~v~~~p~~~g~Gv 291 (332)
T PF07745_consen 215 EDLKNNLNDL---ASRYGKPVMVVETGYPWTLDDGDGTGNIIGATSLISGYPATPQGQADFLRDLINAVKNVPNGGGLGV 291 (332)
T ss_dssp HHHHHHHHHH---HHHHT-EEEEEEE---SBS--SSSS--SSSSSTGGTTS-SSHHHHHHHHHHHHHHHHTS--TTEEEE
T ss_pred HHHHHHHHHH---HHHhCCeeEEEeccccccccccccccccCccccccCCCCCCHHHHHHHHHHHHHHHHHhccCCeEEE
Confidence 3333333321 123678999999998776110 1356899999998887 67899
Q ss_pred EEec
Q 008330 353 ALWT 356 (570)
Q Consensus 353 ~~W~ 356 (570)
+||-
T Consensus 292 fYWe 295 (332)
T PF07745_consen 292 FYWE 295 (332)
T ss_dssp EEE-
T ss_pred Eeec
Confidence 9995
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A .... |
| >PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=99.10 E-value=4e-09 Score=125.51 Aligned_cols=147 Identities=14% Similarity=0.092 Sum_probs=96.9
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
+|++|+|||||+..+. +..........+..+++.||++|+|+||+.. |++
T Consensus 330 NGkpi~lrGvnrh~~~-p~~G~a~~~e~~~~dl~lmK~~g~NavR~sH---------yP~-------------------- 379 (1021)
T PRK10340 330 NNRYVKLHGVNRHDND-HRKGRAVGMDRVEKDIQLMKQHNINSVRTAH---------YPN-------------------- 379 (1021)
T ss_pred CCEEEEEEEeecCCCC-cccCccCCHHHHHHHHHHHHHCCCCEEEecC---------CCC--------------------
Confidence 8999999999986442 1111112334467889999999999999832 110
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEE
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVG 209 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig 209 (570)
=.+..+.|.+.||+|+-+.-....+|.+.. + -.+..+...-.+.+.+-.+.|.+|++++|.|+.
T Consensus 380 --------------~~~fydlcDe~GllV~dE~~~e~~g~~~~~-~-~~~~~~~p~~~~~~~~~~~~mV~RdrNHPSIi~ 443 (1021)
T PRK10340 380 --------------DPRFYELCDIYGLFVMAETDVESHGFANVG-D-ISRITDDPQWEKVYVDRIVRHIHAQKNHPSIII 443 (1021)
T ss_pred --------------CHHHHHHHHHCCCEEEECCcccccCccccc-c-cccccCCHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 124678899999999987411111111100 0 011111101124556678899999999999999
Q ss_pred EeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 210 MSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 210 ~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
+.+.||.... .. ++++++.+|+.||.++|..++
T Consensus 444 WslGNE~~~g----~~----~~~~~~~~k~~DptR~v~~~~ 476 (1021)
T PRK10340 444 WSLGNESGYG----CN----IRAMYHAAKALDDTRLVHYEE 476 (1021)
T ss_pred EECccCcccc----HH----HHHHHHHHHHhCCCceEEeCC
Confidence 9999998432 12 357789999999999998876
|
|
| >PRK09525 lacZ beta-D-galactosidase; Reviewed | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.2e-09 Score=124.45 Aligned_cols=141 Identities=18% Similarity=0.112 Sum_probs=98.0
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
+|++++|||||+..+.. ..........+..++..||++|+|+||+.. |++
T Consensus 346 NGkpi~lrGvn~h~~~p-~~G~a~t~e~~~~di~lmK~~g~NaVR~sH---------yP~-------------------- 395 (1027)
T PRK09525 346 NGKPLLIRGVNRHEHHP-EHGQVMDEETMVQDILLMKQHNFNAVRCSH---------YPN-------------------- 395 (1027)
T ss_pred CCEEEEEEEeEccccCc-ccCccCCHHHHHHHHHHHHHCCCCEEEecC---------CCC--------------------
Confidence 89999999999864421 111223334467889999999999999932 110
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEec----CCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDN----HISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVR 205 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~----H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p 205 (570)
=.+..+.|.+.||+|+-+. |...+. .....+..+ .+.+.+-++.|..|.+++|
T Consensus 396 --------------~p~fydlcDe~GilV~dE~~~e~hg~~~~--------~~~~~dp~~-~~~~~~~~~~mV~RdrNHP 452 (1027)
T PRK09525 396 --------------HPLWYELCDRYGLYVVDEANIETHGMVPM--------NRLSDDPRW-LPAMSERVTRMVQRDRNHP 452 (1027)
T ss_pred --------------CHHHHHHHHHcCCEEEEecCccccCCccc--------cCCCCCHHH-HHHHHHHHHHHHHhCCCCC
Confidence 0245788999999999874 322110 000111111 3556777889999999999
Q ss_pred cEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCC
Q 008330 206 NVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGL 251 (570)
Q Consensus 206 ~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~ 251 (570)
.|+.+.+.||+... .+ ..++++.+|+.||.++|..++.
T Consensus 453 SIi~WSlgNE~~~g-~~-------~~~l~~~~k~~DptRpV~y~~~ 490 (1027)
T PRK09525 453 SIIIWSLGNESGHG-AN-------HDALYRWIKSNDPSRPVQYEGG 490 (1027)
T ss_pred EEEEEeCccCCCcC-hh-------HHHHHHHHHhhCCCCcEEECCC
Confidence 99999999998532 11 3567788999999999999873
|
|
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.9e-08 Score=99.68 Aligned_cols=210 Identities=15% Similarity=0.209 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHhcCCCEEE---EecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 141 IKAFQAVVASLGNNNVMVI---LDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VI---LD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
++..|++|++|.++||.|. |=.|...|.|.... +.....+.+.++.+.+++||++. |..+|+.|||.
T Consensus 15 ~~~~D~~~~~a~~~gi~v~gH~l~W~~~~P~W~~~~--------~~~~~~~~~~~~i~~v~~ry~g~--i~~wdV~NE~~ 84 (254)
T smart00633 15 FSGADAIVNFAKENGIKVRGHTLVWHSQTPDWVFNL--------SKETLLARLENHIKTVVGRYKGK--IYAWDVVNEAL 84 (254)
T ss_pred hHHHHHHHHHHHHCCCEEEEEEEeecccCCHhhhcC--------CHHHHHHHHHHHHHHHHHHhCCc--ceEEEEeeecc
Confidence 6789999999999999982 22333345553210 01112456788899999999987 77799999997
Q ss_pred CCCCC---hhHHH-----HHHHHHHHHHHhcCCCcEEEEeCCCCCCc-------chh---hhhcccCcCCCCCEEEEEee
Q 008330 218 GPKQN---VKDWY-----RYMQLGAEAVHAANPEVLVILSGLNFDKD-------LSF---VRNQAVNLTFTGKLVFEAHW 279 (570)
Q Consensus 218 ~~~~~---~~~W~-----~~~~~~~~aIr~~dp~~lIiVeG~~w~~d-------l~~---~~~~p~~l~~~~nlVys~H~ 279 (570)
...+. ...|+ .++..+.+++|+++|+..+++.+.+-... +.. +....+ ++ +-+=+..|+
T Consensus 85 ~~~~~~~~~~~w~~~~G~~~i~~af~~ar~~~P~a~l~~Ndy~~~~~~~k~~~~~~~v~~l~~~g~--~i-DgiGlQ~H~ 161 (254)
T smart00633 85 HDNGSGLRRSVWYQILGEDYIEKAFRYAREADPDAKLFYNDYNTEEPNAKRQAIYELVKKLKAKGV--PI-DGIGLQSHL 161 (254)
T ss_pred cCCCcccccchHHHhcChHHHHHHHHHHHHhCCCCEEEEeccCCcCccHHHHHHHHHHHHHHHCCC--cc-ceeeeeeee
Confidence 54211 12453 57788999999999999999975331111 111 111111 22 344556677
Q ss_pred cCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCC--CceEEecc
Q 008330 280 YGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELD--WDWALWTL 357 (570)
Q Consensus 280 Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~g--igw~~W~~ 357 (570)
+... + ....+.+.+++ +.+.|.||+|+|+++..........++++.+++.+.++. .|-++|.+
T Consensus 162 ~~~~---------~--~~~~~~~~l~~----~~~~g~pi~iTE~dv~~~~~~~~qA~~~~~~l~~~~~~p~v~gi~~Wg~ 226 (254)
T smart00633 162 SLGS---------P--NIAEIRAALDR----FASLGLEIQITELDISGYPNPQAQAADYEEVFKACLAHPAVTGVTVWGV 226 (254)
T ss_pred cCCC---------C--CHHHHHHHHHH----HHHcCCceEEEEeecCCCCcHHHHHHHHHHHHHHHHcCCCeeEEEEeCC
Confidence 5311 0 12344444443 344799999999999875432345678899988888764 57789987
Q ss_pred CceeecccCccCCCceeeeecCCCCC
Q 008330 358 VGSYYLREGVIGLNEYYGLFDWNWCD 383 (570)
Q Consensus 358 ~G~y~~r~~~~~~~et~Gll~~dw~~ 383 (570)
...+-.+. ++..||++.|+..
T Consensus 227 ~d~~~W~~-----~~~~~L~d~~~~~ 247 (254)
T smart00633 227 TDKYSWLD-----GGAPLLFDANYQP 247 (254)
T ss_pred ccCCcccC-----CCCceeECCCCCC
Confidence 53221111 1235788777643
|
|
| >COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.1e-07 Score=92.02 Aligned_cols=234 Identities=16% Similarity=0.120 Sum_probs=133.8
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.+|+.|+|-|||-+-.+ ++.+ .-|+.-.+-.-++..-++-+.|.++||+
T Consensus 65 ~qD~~~iLK~~GvNyvRlRvwnd-----P~ds--------------------ngn~yggGnnD~~k~ieiakRAk~~GmK 119 (403)
T COG3867 65 RQDALQILKNHGVNYVRLRVWND-----PYDS--------------------NGNGYGGGNNDLKKAIEIAKRAKNLGMK 119 (403)
T ss_pred HHHHHHHHHHcCcCeEEEEEecC-----CccC--------------------CCCccCCCcchHHHHHHHHHHHHhcCcE
Confidence 46789999999999999955221 1111 0122222223345566777899999999
Q ss_pred EEEecCCCCCCccccCC--CCCCCCCCCCCC--HHHHHHHHHHHHHHhCCCCc-EEEEeccCCCCCC-------CCChhH
Q 008330 158 VILDNHISKPGWCCSNS--DGNGFFGDQYFN--PDLWIKGLTKMATIFNGVRN-VVGMSLRNELRGP-------KQNVKD 225 (570)
Q Consensus 158 VILD~H~~~~~w~~~~~--dgng~~~d~~~~--~~~~~~~w~~iA~ryk~~p~-Vig~dL~NEP~~~-------~~~~~~ 225 (570)
|++|+|-++ -|..... ....|=.. .|. +....++=+.+.+.++++-- .=...+-||-.+. ..+.+-
T Consensus 120 Vl~dFHYSD-fwaDPakQ~kPkaW~~l-~fe~lk~avy~yTk~~l~~m~~eGi~pdmVQVGNEtn~gflwp~Ge~~~f~k 197 (403)
T COG3867 120 VLLDFHYSD-FWADPAKQKKPKAWENL-NFEQLKKAVYSYTKYVLTTMKKEGILPDMVQVGNETNGGFLWPDGEGRNFDK 197 (403)
T ss_pred EEeeccchh-hccChhhcCCcHHhhhc-CHHHHHHHHHHHHHHHHHHHHHcCCCccceEeccccCCceeccCCCCcChHH
Confidence 999999763 2321100 00011111 111 11222344556666665422 1235788997654 125667
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEE---eCCCCCC---cchhhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhH
Q 008330 226 WYRYMQLGAEAVHAANPEVLVIL---SGLNFDK---DLSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGR 299 (570)
Q Consensus 226 W~~~~~~~~~aIr~~dp~~lIiV---eG~~w~~---dl~~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~ 299 (570)
|.....+++.|||+++|+.+|++ +|..-+. -++.+..+.+ +--|+..-+|++.+. ...+
T Consensus 198 ~a~L~n~g~~avrev~p~ikv~lHla~g~~n~~y~~~fd~ltk~nv-----dfDVig~SyYpyWhg----------tl~n 262 (403)
T COG3867 198 MAALLNAGIRAVREVSPTIKVALHLAEGENNSLYRWIFDELTKRNV-----DFDVIGSSYYPYWHG----------TLNN 262 (403)
T ss_pred HHHHHHHHhhhhhhcCCCceEEEEecCCCCCchhhHHHHHHHHcCC-----CceEEeeeccccccC----------cHHH
Confidence 77888999999999999999888 3432111 1122333333 334888889987553 1234
Q ss_pred HHHHHHHHHHHHHhcCCCeEEeccccCCC--CC--C-----------------cchHHHHHHHHHHHH----HCCCceEE
Q 008330 300 VVDNVMRLSGFLLEQGWPLFVSEFGADLR--GN--N-----------------VNDNRYLNCFFGVAA----ELDWDWAL 354 (570)
Q Consensus 300 ~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~--~~--~-----------------~~~~~~~~~~~~~~~----~~gigw~~ 354 (570)
+...+++.. ...+.-|+|-|-+.... ++ . +....+++++++... .+|+|=+|
T Consensus 263 L~~nl~dia---~rY~K~VmV~Etay~yTlEdgDg~~Nt~~~~~~t~~ypitVQGQat~vrDvie~V~nvp~~~GlGvFY 339 (403)
T COG3867 263 LTTNLNDIA---SRYHKDVMVVETAYTYTLEDGDGHENTFPSSEQTGGYPITVQGQATFVRDVIEAVKNVPKSNGLGVFY 339 (403)
T ss_pred HHhHHHHHH---HHhcCeEEEEEecceeeeccCCCCCCcCCcccccCCCceEEechhhHHHHHHHHHHhCCCCCceEEEE
Confidence 444444422 12556788888887331 10 0 124567777777765 45788899
Q ss_pred ec
Q 008330 355 WT 356 (570)
Q Consensus 355 W~ 356 (570)
|-
T Consensus 340 WE 341 (403)
T COG3867 340 WE 341 (403)
T ss_pred ec
Confidence 96
|
|
| >PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.8e-09 Score=108.25 Aligned_cols=178 Identities=11% Similarity=0.128 Sum_probs=99.2
Q ss_pred cCCeEEcCCCCEEEEEEe-eCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccc--c-Cccccchhhhhhh
Q 008330 42 NSRWIVDENGHRVKLACV-NWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLAT--N-DSLASLTVRQSFQ 117 (570)
Q Consensus 42 ~G~~IVd~~G~~v~L~GV-Nw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~--~-~~~~n~tv~~s~~ 117 (570)
+||.|++++|+|+..-|- -|..+ +.+.....+..++..++.|||+||+-+-..... . ..++..+.
T Consensus 1 n~r~f~~~dG~Pff~lgdT~W~~~------~~~~~~e~~~yL~~r~~qgFN~iq~~~l~~~~~~~~~n~~~~~~~----- 69 (289)
T PF13204_consen 1 NGRHFVYADGTPFFWLGDTAWSLF------HRLTREEWEQYLDTRKEQGFNVIQMNVLPQWDGYNTPNRYGFAPF----- 69 (289)
T ss_dssp TSSSEEETTS-B--EEEEE-TTHH------HH--HHHHHHHHHHHHHTT--EEEEES-SSSS-B----TTS-BS------
T ss_pred CCceEecCCCCEEeehhHHHHHHh------hCCCHHHHHHHHHHHHHCCCCEEEEEeCCCcccccccccCCCcCC-----
Confidence 588999999999998773 35432 222223457789999999999999966432111 0 00110000
Q ss_pred hccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEE-EecCCC---CCCccccCCCCCCCCCCCCCCHHHHHHH
Q 008330 118 KLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVI-LDNHIS---KPGWCCSNSDGNGFFGDQYFNPDLWIKG 193 (570)
Q Consensus 118 ~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VI-LD~H~~---~~~w~~~~~dgng~~~d~~~~~~~~~~~ 193 (570)
.... + ...+..-.++.+|+.+|++|+.|.++||.+- |=+|.. ++.|..+ ...+.++...++
T Consensus 70 ----~~~~-~-~~~d~~~~N~~YF~~~d~~i~~a~~~Gi~~~lv~~wg~~~~~~~Wg~~---------~~~m~~e~~~~Y 134 (289)
T PF13204_consen 70 ----PDED-P-GQFDFTRPNPAYFDHLDRRIEKANELGIEAALVPFWGCPYVPGTWGFG---------PNIMPPENAERY 134 (289)
T ss_dssp ----SSTT--------TT----HHHHHHHHHHHHHHTT-EEEEESS-HHHHH----------------TTSS-HHHHHHH
T ss_pred ----CCCC-c-cccCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEEECCcccccccccc---------ccCCCHHHHHHH
Confidence 0000 0 0012223467899999999999999999984 445521 1223111 134678999999
Q ss_pred HHHHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 194 LTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 194 w~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
++.|++||+.+|||+ +.|-||=.......+.|. ++++.|++.+|..|+.+=.
T Consensus 135 ~~yv~~Ry~~~~Nvi-W~l~gd~~~~~~~~~~w~----~~~~~i~~~dp~~L~T~H~ 186 (289)
T PF13204_consen 135 GRYVVARYGAYPNVI-WILGGDYFDTEKTRADWD----AMARGIKENDPYQLITIHP 186 (289)
T ss_dssp HHHHHHHHTT-SSEE-EEEESSS--TTSSHHHHH----HHHHHHHHH--SS-EEEEE
T ss_pred HHHHHHHHhcCCCCE-EEecCccCCCCcCHHHHH----HHHHHHHhhCCCCcEEEeC
Confidence 999999999999999 999999821122456664 5678999999988888844
|
|
| >COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.3e-08 Score=104.51 Aligned_cols=262 Identities=13% Similarity=0.046 Sum_probs=147.4
Q ss_pred hHHHHHHHHHHcCCcEEEecccc-cccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 77 PMDMLSKRVVDMGFNCVRLTWPL-YLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRlPi~~-~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
.++++++.++.+|++.+|+-+-. +-..+ . .|+ .| -.+.+.+++..++.|...+
T Consensus 27 ei~~dle~a~~vg~k~lR~fiLDgEdc~d-------------~-------~G~--~n----a~s~~~y~~~fla~a~~l~ 80 (587)
T COG3934 27 EIKADLEPAGFVGVKDLRLFILDGEDCRD-------------K-------EGY--RN----AGSNVWYAAWFLAPAGYLD 80 (587)
T ss_pred hhhcccccccCccceeEEEEEecCcchhh-------------h-------hce--ec----ccccHHHHHHHhhhcccCc
Confidence 45667778889999999996321 11100 0 011 00 1234778999999999999
Q ss_pred CEEEEec-----CCCCCCcccc---CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCC-CChhHH
Q 008330 156 VMVILDN-----HISKPGWCCS---NSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPK-QNVKDW 226 (570)
Q Consensus 156 l~VILD~-----H~~~~~w~~~---~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~-~~~~~W 226 (570)
|+|++-+ |...-.|... .........|+. ....+.++.+.+.+.||.+|.+.|+.|.|||.... .+.+..
T Consensus 81 lkvlitlivg~~hmgg~Nw~Ipwag~~~pdn~iyD~k-~~~~~kkyvedlVk~yk~~ptI~gw~l~Ne~lv~~p~s~N~f 159 (587)
T COG3934 81 LKVLITLIVGLKHMGGTNWRIPWAGEQSPDNVIYDPK-FRGPGKKYVEDLVKPYKLDPTIAGWALRNEPLVEAPISVNNF 159 (587)
T ss_pred ceEEEEEeecccccCcceeEeecCCCCCccccccchh-hcccHHHHHHHHhhhhccChHHHHHHhcCCccccccCChhHH
Confidence 9997643 4332222110 001111111211 13445678888999999999999999999987642 244455
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccC--cCCCCCEEEEEeecCCCCCCC---CCCCCCcchhhHHH
Q 008330 227 YRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVN--LTFTGKLVFEAHWYGFTDGQA---WVDGNPNQVCGRVV 301 (570)
Q Consensus 227 ~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~--l~~~~nlVys~H~Y~~~~~~~---w~~~~~~~~~~~~~ 301 (570)
..+..++...|+.+||+|+|-++...+-- .+.+...+. .++ -++|.|..++... |...-
T Consensus 160 ~~w~~emy~yiK~ldd~hlvsvGD~~sp~--~~~~pyN~r~~vDy-----a~~hLY~hyd~sl~~r~s~~y--------- 223 (587)
T COG3934 160 WDWSGEMYAYIKWLDDGHLVSVGDPASPW--PQYAPYNARFYVDY-----AANHLYRHYDTSLVSRVSTVY--------- 223 (587)
T ss_pred HHHHHHHHHHhhccCCCCeeecCCcCCcc--cccCCcccceeecc-----ccchhhhhccCChhheeeeee---------
Confidence 55666778999999999999998764310 011111111 111 1678886443211 11000
Q ss_pred HHHHHHHHHHHhcC-CCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCCceEEeccCceeecccCccC----CCceeee
Q 008330 302 DNVMRLSGFLLEQG-WPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIG----LNEYYGL 376 (570)
Q Consensus 302 ~~~~~~~g~l~~~g-~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gigw~~W~~~G~y~~r~~~~~----~~et~Gl 376 (570)
...+.......| .||++-|||.+...+......|+-.....++--+.|-.+|++.+---..+..+. .+..|||
T Consensus 224 --g~~~l~i~~~~g~~pV~leefGfsta~g~e~s~ayfiw~~lal~~ggdGaLiwclsdf~~gsdd~ey~w~p~el~fgi 301 (587)
T COG3934 224 --GKPYLDIPTIMGWQPVNLEEFGFSTAFGQENSPAYFIWIRLALDTGGDGALIWCLSDFHLGSDDSEYTWGPMELEFGI 301 (587)
T ss_pred --cchhhccchhcccceeeccccCCcccccccccchhhhhhhhHHhhcCCceEEEEecCCccCCCCCCCccccccceeee
Confidence 000011112255 899999999988655332233322222244455678889998754211112221 2567888
Q ss_pred ecCCCCC
Q 008330 377 FDWNWCD 383 (570)
Q Consensus 377 l~~dw~~ 383 (570)
++.|-..
T Consensus 302 Iradgpe 308 (587)
T COG3934 302 IRADGPE 308 (587)
T ss_pred ecCCCch
Confidence 8877443
|
|
| >COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.1e-06 Score=91.07 Aligned_cols=137 Identities=15% Similarity=0.083 Sum_probs=97.6
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|++||+|+.|+.++|..+-++ . .....++..++.+++++++|.++||.
T Consensus 61 YkeDi~L~~emG~~~~R~SI~WsRIfP~----g---------------------~~~e~N~~gl~fY~~l~del~~~gIe 115 (460)
T COG2723 61 YKEDIALAKEMGLNAFRTSIEWSRIFPN----G---------------------DGGEVNEKGLRFYDRLFDELKARGIE 115 (460)
T ss_pred hHHHHHHHHHcCCCEEEeeeeEEEeecC----C---------------------CCCCcCHHHHHHHHHHHHHHHHcCCE
Confidence 6899999999999999999999665441 1 11124567999999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCC-------------CCh
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPK-------------QNV 223 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~-------------~~~ 223 (570)
.++.+|+.+ |.|... ...||-+ + -..+.|.++-+.+++||++. |--+=.+|||.... ...
T Consensus 116 p~vTL~Hfd~P~~L~~--~ygGW~n-R-~~i~~F~~ya~~vf~~f~dk--Vk~W~TFNE~n~~~~~~y~~~~~~p~~~~~ 189 (460)
T COG2723 116 PFVTLYHFDLPLWLQK--PYGGWEN-R-ETVDAFARYAATVFERFGDK--VKYWFTFNEPNVVVELGYLYGGHPPGIVDP 189 (460)
T ss_pred EEEEecccCCcHHHhh--ccCCccC-H-HHHHHHHHHHHHHHHHhcCc--ceEEEEecchhhhhcccccccccCCCccCH
Confidence 999998864 443221 1124433 3 24688999999999999997 44467899997641 011
Q ss_pred hHHH-------HHHHHHHHHHHhcCCC-cE
Q 008330 224 KDWY-------RYMQLGAEAVHAANPE-VL 245 (570)
Q Consensus 224 ~~W~-------~~~~~~~~aIr~~dp~-~l 245 (570)
+.-+ .+-..+++++|+.+|+ .+
T Consensus 190 ~~~~qa~hh~~lA~A~avk~~~~~~~~~kI 219 (460)
T COG2723 190 KAAYQVAHHMLLAHALAVKAIKKINPKGKV 219 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCcCce
Confidence 1111 1224678899999997 44
|
|
| >smart00458 RICIN Ricin-type beta-trefoil | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.1e-06 Score=77.22 Aligned_cols=95 Identities=24% Similarity=0.520 Sum_probs=71.4
Q ss_pred CCCCceeeeecCCCCceecCCCCC---CCCccccCCcceeecccceEEeeccCC-ccceeccccC--CCCCceeEeeccc
Q 008330 416 HPATGLCVQRKSFLDPLTLGPCTE---SEAWSYTPHKTISLKGAYFCLQAKHVG-KPAKLGIICT--DCGSTWEIISDSK 489 (570)
Q Consensus 416 ~~~tg~c~~~~~~~~~~~~~~c~~---~~~W~~~~~~~~~~~~~~~cl~a~~~g-~~~~~~~~c~--~~~~~W~~~s~~~ 489 (570)
...+|+|+++.+...++.+.+|.. ++.|.|+.++.|+++ +++||++.+.. .++.+ ..|. +++|+|.+..++.
T Consensus 3 ~~~~~~Cl~~~~~~~~v~l~~c~~~~~~Q~w~~~~~g~~~~~-~~~Cl~~~~~~~~~v~l-~~c~~~~~~Q~W~~~~~~~ 80 (117)
T smart00458 3 SGNTGKCLDVNGNSNPVGLFDCHGTGGNQLWKLTSDGAIRIA-TDLCLTANGNTGSTVTL-YSCDGDADNQYWTVNKDGT 80 (117)
T ss_pred eccCCccEecCCCCceEEEEeCCCCCccceEEEeCCCeEEec-CCccCccCCCCCCEEEE-EECCCCCcCCEEEECCCee
Confidence 347899999865424589999987 389999988888887 89999988864 34444 7887 5789999987554
Q ss_pred cEEEEecCCCceEEEeecCCC---ceeecce
Q 008330 490 MHLSSKADNGTTVCLDVDSSN---TIVTNTC 517 (570)
Q Consensus 490 ~~~~~~~~~~~~~cld~~~~~---~~~~~~c 517 (570)
+ ... .+.+|||+.... .++.+.|
T Consensus 81 i--~~~---~~~~cl~~~~~~~~~~~~~~~c 106 (117)
T smart00458 81 I--RNP---DSGLCLDVKDGNTGTKVILWTC 106 (117)
T ss_pred E--EeC---CCCEEEecCCCCCCceEEEEeC
Confidence 3 222 689999997533 5777776
|
Carbohydrate-binding domain formed from presumed gene triplication. |
| >PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.5e-06 Score=95.57 Aligned_cols=110 Identities=10% Similarity=0.069 Sum_probs=81.9
Q ss_pred hHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 77 PMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
..+++++.|+++|+|+.|++++|..+.++. .+...++..++.++.+|+++.++||
T Consensus 72 ry~eDi~l~~~lG~~~yR~si~WsRi~P~g-------------------------~~~~~n~~~~~~Y~~~i~~l~~~gi 126 (474)
T PRK09852 72 RYKEDIALMAEMGFKVFRTSIAWSRLFPQG-------------------------DELTPNQQGIAFYRSVFEECKKYGI 126 (474)
T ss_pred hhHHHHHHHHHcCCCeEEeeceeeeeeeCC-------------------------CCCCCCHHHHHHHHHHHHHHHHcCC
Confidence 368999999999999999999998776521 0112366789999999999999999
Q ss_pred EEEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 157 MVILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 157 ~VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.+||.+|+.. |.|... .-.||-+.. ..+.|.++++.++++|++.-. -+=.+|||.
T Consensus 127 ~p~VtL~H~~~P~~l~~--~~GGW~~~~--~~~~F~~ya~~~~~~fgd~Vk--~WiTfNEPn 182 (474)
T PRK09852 127 EPLVTLCHFDVPMHLVT--EYGSWRNRK--MVEFFSRYARTCFEAFDGLVK--YWLTFNEIN 182 (474)
T ss_pred EEEEEeeCCCCCHHHHH--hcCCCCCHH--HHHHHHHHHHHHHHHhcCcCC--eEEeecchh
Confidence 9999988754 555321 012554432 368999999999999998632 244667775
|
|
| >PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.6e-06 Score=73.47 Aligned_cols=78 Identities=15% Similarity=0.135 Sum_probs=46.3
Q ss_pred HHHHhCCCCcEEEEeccCC-CCCCC-------C--ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccC
Q 008330 197 MATIFNGVRNVVGMSLRNE-LRGPK-------Q--NVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVN 266 (570)
Q Consensus 197 iA~ryk~~p~Vig~dL~NE-P~~~~-------~--~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~ 266 (570)
|.++|++.+.|+++||.|| |.... . ..+....++++++.+||+++|+++|.++. |+.+...+.....
T Consensus 1 iv~~~~~~~~Il~Wdl~NE~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~iR~~dP~~pvt~g~--~~~~~~~~~~~~~- 77 (88)
T PF12876_consen 1 IVTRFGYDPRILAWDLWNEPPNNWADGYPAEWGDPKAEAYAEWLKEAFRWIRAVDPSQPVTSGF--WGGDWEDLEQLQA- 77 (88)
T ss_dssp -HHHTT-GGGEEEEESSTTTT-TT-TT-TT-TT-TTSHHHHHHHHHHHHHHHTT-TTS-EE--B----S-TTHHHHS---
T ss_pred CchhhcCCCCEEEEEeecCCCCcccccccccccchhHHHHHHHHHHHHHHHHHhCCCCcEEeec--ccCCHHHHHHhch-
Confidence 5689999999999999999 65211 0 12455678899999999999999998764 4433333332221
Q ss_pred cCCCCCEEEEEeec
Q 008330 267 LTFTGKLVFEAHWY 280 (570)
Q Consensus 267 l~~~~nlVys~H~Y 280 (570)
+.--|+++|.|
T Consensus 78 ---~~~DvisfH~Y 88 (88)
T PF12876_consen 78 ---ENLDVISFHPY 88 (88)
T ss_dssp ---TT-SSEEB-EE
T ss_pred ---hcCCEEeeecC
Confidence 13347899998
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B. |
| >COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.4e-05 Score=92.50 Aligned_cols=140 Identities=18% Similarity=0.155 Sum_probs=95.3
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
+|++|++|||||--+. +....+.....++.+++.||++|+|+||.. .+ ++
T Consensus 296 NGkpvf~kGvnrHe~~-~~~G~~~~~~~~~~dl~lmk~~n~N~vRts-Hy--------P~-------------------- 345 (808)
T COG3250 296 NGKPVFIRGVNRHEDD-PILGRVTDEDAMERDLKLMKEANMNSVRTS-HY--------PN-------------------- 345 (808)
T ss_pred CCeEEEEeeeecccCC-CccccccCHHHHHHHHHHHHHcCCCEEEec-CC--------CC--------------------
Confidence 9999999999995332 111122222337889999999999999985 21 11
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEE
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVG 209 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig 209 (570)
=+...+.|.+.||+||-|.-... ... ..+..+ .+...+-.+.|.+|-|++|.|+.
T Consensus 346 --------------~~~~ydLcDelGllV~~Ea~~~~----~~~------~~~~~~-~k~~~~~i~~mver~knHPSIii 400 (808)
T COG3250 346 --------------SEEFYDLCDELGLLVIDEAMIET----HGM------PDDPEW-RKEVSEEVRRMVERDRNHPSIII 400 (808)
T ss_pred --------------CHHHHHHHHHhCcEEEEecchhh----cCC------CCCcch-hHHHHHHHHHHHHhccCCCcEEE
Confidence 13456789999999999853321 000 111111 34455667889999999999999
Q ss_pred EeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCC
Q 008330 210 MSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLN 252 (570)
Q Consensus 210 ~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~ 252 (570)
+.+.||+.-+. ..| .+...+.+.+|...+..++..
T Consensus 401 Ws~gNE~~~g~---~~~-----~~~~~~k~~d~~r~~~~~~~~ 435 (808)
T COG3250 401 WSLGNESGHGS---NHW-----ALYRWFKASDPTRPVQYEGRG 435 (808)
T ss_pred EeccccccCcc---ccH-----HHHHHHhhcCCccceeccCcc
Confidence 99999996532 223 244667788888888888765
|
|
| >PRK15014 6-phospho-beta-glucosidase BglA; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.5e-06 Score=91.90 Aligned_cols=110 Identities=12% Similarity=0.067 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 77 PMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
..+++++.|+++|+|+.|+.++|..+.++. . +...+...++.++++|+++.++||
T Consensus 70 ry~EDI~Lm~elG~~~yRfSIsWsRI~P~G---------------------~----~~~~N~~gl~~Y~~lid~l~~~GI 124 (477)
T PRK15014 70 HYKEDIKLFAEMGFKCFRTSIAWTRIFPKG---------------------D----EAQPNEEGLKFYDDMFDELLKYNI 124 (477)
T ss_pred ccHHHHHHHHHcCCCEEEecccceeeccCC---------------------C----CCCCCHHHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999998776521 0 111356789999999999999999
Q ss_pred EEEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 157 MVILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 157 ~VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
..||.+|+.. |.|... .-.||-+ + ...+.|.++.+.++++|++.-. -+=.+|||.
T Consensus 125 ~P~vTL~H~dlP~~L~~--~yGGW~n-~-~~~~~F~~Ya~~~f~~fgdrVk--~WiT~NEp~ 180 (477)
T PRK15014 125 EPVITLSHFEMPLHLVQ--QYGSWTN-R-KVVDFFVRFAEVVFERYKHKVK--YWMTFNEIN 180 (477)
T ss_pred EEEEEeeCCCCCHHHHH--hcCCCCC-h-HHHHHHHHHHHHHHHHhcCcCC--EEEEecCcc
Confidence 9999997754 554321 0124443 3 2478999999999999999733 244788885
|
|
| >cd00161 RICIN Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication | Back alignment and domain information |
|---|
Probab=98.18 E-value=7.2e-06 Score=71.80 Aligned_cols=93 Identities=28% Similarity=0.607 Sum_probs=69.7
Q ss_pred CceeeeecCC--CCceecCCCCCC---CCccccCCcceeecccceEEeeccC--CccceeccccC--CCCCceeEeeccc
Q 008330 419 TGLCVQRKSF--LDPLTLGPCTES---EAWSYTPHKTISLKGAYFCLQAKHV--GKPAKLGIICT--DCGSTWEIISDSK 489 (570)
Q Consensus 419 tg~c~~~~~~--~~~~~~~~c~~~---~~W~~~~~~~~~~~~~~~cl~a~~~--g~~~~~~~~c~--~~~~~W~~~s~~~ 489 (570)
+|+|+++.+. ..++.+.+|.++ +.|.++.++.|+++.+++||++.+. |.++.+ ..|. +++|+|++..+.
T Consensus 9 ~~~cL~~~~~~~~~~v~~~~c~~~~~~Q~W~~~~~g~~~~~~~~~Cl~~~~~~~~~~~~~-~~c~~~~~~Q~W~~~~~~- 86 (124)
T cd00161 9 TGLCLDVNGGSDGGPVQLYPCHGNGNNQKWTLTSDGTIRIKSSNLCLDVGGDAPGSKVRL-YTCSGGSDNQRWTFNKDG- 86 (124)
T ss_pred CCeEEECCCCCCCCEEEEEECCCCCccCCEEEeCCCeEEEcCCCeEEcccCCCCCCEEEE-EECCCCCcCCEEEECCCc-
Confidence 8999998552 355899999874 7999999888888778899998885 566666 7887 467999998763
Q ss_pred cEEEEecCCCceEEEeecCC---C-ceeecce
Q 008330 490 MHLSSKADNGTTVCLDVDSS---N-TIVTNTC 517 (570)
Q Consensus 490 ~~~~~~~~~~~~~cld~~~~---~-~~~~~~c 517 (570)
+|... .+.+|||+... + .|+...|
T Consensus 87 -~i~~~---~~~~cl~~~~~~~~~~~v~~~~c 114 (124)
T cd00161 87 -TIRNL---KSGKCLDVKGGNTNGTNLILWTC 114 (124)
T ss_pred -EEEEC---CCCeEEeCCCCCCCCCEEEEEeC
Confidence 34333 37899999753 3 4555666
|
The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. |
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.6e-05 Score=83.34 Aligned_cols=213 Identities=13% Similarity=0.125 Sum_probs=109.0
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
+|+|+.|.+--..-+ -+...-.++.++.||++|+|+|-+++.|...++.
T Consensus 5 ~g~~~~~~~Ge~hy~-------r~p~~~W~~~l~k~ka~G~n~v~~yv~W~~he~~------------------------ 53 (319)
T PF01301_consen 5 DGKPFFILSGEFHYF-------RIPPEYWRDRLQKMKAAGLNTVSTYVPWNLHEPE------------------------ 53 (319)
T ss_dssp TTEEE-EEEEEE-GG-------GS-GGGHHHHHHHHHHTT-SEEEEE--HHHHSSB------------------------
T ss_pred CCEEEEEEEeeeccc-------cCChhHHHHHHHHHHhCCcceEEEeccccccCCC------------------------
Confidence 788888876543211 1222346889999999999999999999766541
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCC--CCCC-CC------CCCC---HHHHHHHHHHH
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDG--NGFF-GD------QYFN---PDLWIKGLTKM 197 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dg--ng~~-~d------~~~~---~~~~~~~w~~i 197 (570)
|...|-+...-|+++|+.|+++||+|||-. +.|.|+.-+. -+.| .. +..+ .+.+.+.++.|
T Consensus 54 ---~g~~df~g~~dl~~f~~~a~~~gl~vilrp----Gpyi~aE~~~gG~P~Wl~~~~~~~~R~~~~~~~~~~~~~~~~~ 126 (319)
T PF01301_consen 54 ---EGQFDFTGNRDLDRFLDLAQENGLYVILRP----GPYICAEWDNGGLPAWLLRKPDIRLRTNDPPFLEAVERWYRAL 126 (319)
T ss_dssp ---TTB---SGGG-HHHHHHHHHHTT-EEEEEE----ES---TTBGGGG--GGGGGSTTS-SSSS-HHHHHHHHHHHHHH
T ss_pred ---CCcccccchhhHHHHHHHHHHcCcEEEecc----cceecccccchhhhhhhhccccccccccchhHHHHHHHHHHHH
Confidence 112222333458999999999999999973 3455543321 1112 10 0111 23444555666
Q ss_pred HHHhCC-----CCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEE-eCCCCCCcchhhhhcccCcCCCC
Q 008330 198 ATIFNG-----VRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVIL-SGLNFDKDLSFVRNQAVNLTFTG 271 (570)
Q Consensus 198 A~ryk~-----~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiV-eG~~w~~dl~~~~~~p~~l~~~~ 271 (570)
++..+. --.||++.+=||-.... . =..|++.+.++.++..++.++.. .+..|+.-+. .. ..++
T Consensus 127 ~~~~~~~~~~~GGpII~vQvENEyg~~~-~---~~~Y~~~l~~~~~~~g~~~~~~~t~d~~~~~~~~---~~----~~~g 195 (319)
T PF01301_consen 127 AKIIKPLQYTNGGPIIMVQVENEYGSYG-T---DRAYMEALKDAYRDWGIDPVLLYTTDGPWGSWLP---DG----GLPG 195 (319)
T ss_dssp HHHHGGGBGGGTSSEEEEEESSSGGCTS-S----HHHHHHHHHHHHHTT-SSSBEEEEESSSHCCHC---CC-----TTT
T ss_pred HHHHHhhhhcCCCceehhhhhhhhCCCc-c---cHhHHHHHHHHHHHhhCccceeeccCCCcccccc---cC----CCCc
Confidence 555443 24699999999986321 2 24666777777788777633333 2222322111 10 1123
Q ss_pred CEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCC
Q 008330 272 KLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADL 327 (570)
Q Consensus 272 nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~ 327 (570)
..+|...-+.+... + .+.+..... .....|.+++||+...
T Consensus 196 ~~~~~~~~~~~~~~-----------~---~~~~~~~~~--~~p~~P~~~~E~~~Gw 235 (319)
T PF01301_consen 196 ADIYATDNFPPGDN-----------P---DEYFGDQRS--FQPNQPLMCTEFWGGW 235 (319)
T ss_dssp GSCEEEEEETTTSS-----------H---HHHHHHHHH--HHTTS--EEEEEESS-
T ss_pred ceEEeccccCCCch-----------H---HHHHhhhhh--cCCCCCeEEEEecccc
Confidence 34777777765421 1 111211111 2255699999996543
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B .... |
| >PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.15 E-value=4.4e-05 Score=80.08 Aligned_cols=217 Identities=15% Similarity=0.242 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHhcCCCEEE---EecCCCCCCccccCCCCCCCCCCCCC---CHHHHHHHHHHHHHHhCCCCcEEEEeccC
Q 008330 141 IKAFQAVVASLGNNNVMVI---LDNHISKPGWCCSNSDGNGFFGDQYF---NPDLWIKGLTKMATIFNGVRNVVGMSLRN 214 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VI---LD~H~~~~~w~~~~~dgng~~~d~~~---~~~~~~~~w~~iA~ryk~~p~Vig~dL~N 214 (570)
++..|+++++|.++||.|- |=.|...|.|....... +... -.+...+..+.|++||++...|..+|+.|
T Consensus 58 ~~~~D~~~~~a~~~g~~vrGH~LvW~~~~P~w~~~~~~~-----~~~~~~~~~~~l~~~I~~v~~~y~~~g~i~~WDVvN 132 (320)
T PF00331_consen 58 FESADAILDWARENGIKVRGHTLVWHSQTPDWVFNLANG-----SPDEKEELRARLENHIKTVVTRYKDKGRIYAWDVVN 132 (320)
T ss_dssp -HHHHHHHHHHHHTT-EEEEEEEEESSSS-HHHHTSTTS-----SBHHHHHHHHHHHHHHHHHHHHTTTTTTESEEEEEE
T ss_pred ccchhHHHHHHHhcCcceeeeeEEEcccccceeeeccCC-----CcccHHHHHHHHHHHHHHHHhHhccccceEEEEEee
Confidence 5779999999999999995 66787667775321000 0000 13445678889999999887899999999
Q ss_pred CCCCCCC-----ChhHHH-----HHHHHHHHHHHhcCCCcEEEEeCCCCCCc---------chhhhhcccCcCCCCCEEE
Q 008330 215 ELRGPKQ-----NVKDWY-----RYMQLGAEAVHAANPEVLVILSGLNFDKD---------LSFVRNQAVNLTFTGKLVF 275 (570)
Q Consensus 215 EP~~~~~-----~~~~W~-----~~~~~~~~aIr~~dp~~lIiVeG~~w~~d---------l~~~~~~p~~l~~~~nlVy 275 (570)
||..... ....|+ .|+..+.+..|+++|+...++-..+--.. +..+.... ++. +-+=+
T Consensus 133 E~i~~~~~~~~~r~~~~~~~lG~~yi~~aF~~A~~~~P~a~L~~NDy~~~~~~k~~~~~~lv~~l~~~g--vpI-dgIG~ 209 (320)
T PF00331_consen 133 EAIDDDGNPGGLRDSPWYDALGPDYIADAFRAAREADPNAKLFYNDYNIESPAKRDAYLNLVKDLKARG--VPI-DGIGL 209 (320)
T ss_dssp S-B-TTSSSSSBCTSHHHHHHTTCHHHHHHHHHHHHHTTSEEEEEESSTTSTHHHHHHHHHHHHHHHTT--HCS--EEEE
T ss_pred ecccCCCccccccCChhhhcccHhHHHHHHHHHHHhCCCcEEEeccccccchHHHHHHHHHHHHHHhCC--Ccc-ceech
Confidence 9976531 123566 46788999999999999999954332111 01111111 122 45777
Q ss_pred EEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC------cchHHHHHHHHHHHHHCC
Q 008330 276 EAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN------VNDNRYLNCFFGVAAELD 349 (570)
Q Consensus 276 s~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~------~~~~~~~~~~~~~~~~~g 349 (570)
-.|+-.... .+.+.+.+++ +.+.|.||.|+|+-+...... .....+++.++..+.++.
T Consensus 210 Q~H~~~~~~------------~~~i~~~l~~----~~~~Gl~i~ITElDv~~~~~~~~~~~~~~qA~~~~~~~~~~~~~~ 273 (320)
T PF00331_consen 210 QSHFDAGYP------------PEQIWNALDR----FASLGLPIHITELDVRDDDNPPDAEEEEAQAEYYRDFLTACFSHP 273 (320)
T ss_dssp EEEEETTSS------------HHHHHHHHHH----HHTTTSEEEEEEEEEESSSTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhccCCCCC------------HHHHHHHHHH----HHHcCCceEEEeeeecCCCCCcchHHHHHHHHHHHHHHHHHHhCC
Confidence 888765321 2344444443 455899999999999776542 134678888888888877
Q ss_pred ---C-ceEEeccCceeecccCccCCCceeeeecCCCCC
Q 008330 350 ---W-DWALWTLVGSYYLREGVIGLNEYYGLFDWNWCD 383 (570)
Q Consensus 350 ---i-gw~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~ 383 (570)
+ |-++|.+...+-.+.... .+.-+|++.+|..
T Consensus 274 ~~~v~git~Wg~~D~~sW~~~~~--~~~~~lfd~~~~~ 309 (320)
T PF00331_consen 274 PAAVEGITWWGFTDGYSWRPDTP--PDRPLLFDEDYQP 309 (320)
T ss_dssp HCTEEEEEESSSBTTGSTTGGHS--EG--SSB-TTSBB
T ss_pred ccCCCEEEEECCCCCCcccCCCC--CCCCeeECCCcCC
Confidence 3 678898764442222111 2234567777654
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B .... |
| >PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.14 E-value=3.2e-05 Score=85.69 Aligned_cols=245 Identities=16% Similarity=0.258 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCC----CCCCHHHHHHHHHHHHHHhCCCC---cE--EEEe
Q 008330 141 IKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGD----QYFNPDLWIKGLTKMATIFNGVR---NV--VGMS 211 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d----~~~~~~~~~~~w~~iA~ryk~~p---~V--ig~d 211 (570)
|..+|+++|.+.++||+.+|.+=-.+. +..+. ....|+.. ...+.++|.++.+++++||.+.- .| .-||
T Consensus 83 f~~lD~i~D~l~~~g~~P~vel~f~p~-~~~~~-~~~~~~~~~~~~pp~~~~~W~~lv~~~~~h~~~RYG~~ev~~W~fE 160 (486)
T PF01229_consen 83 FTYLDQILDFLLENGLKPFVELGFMPM-ALASG-YQTVFWYKGNISPPKDYEKWRDLVRAFARHYIDRYGIEEVSTWYFE 160 (486)
T ss_dssp -HHHHHHHHHHHHCT-EEEEEE-SB-G-GGBSS---EETTTTEE-S-BS-HHHHHHHHHHHHHHHHHHHHHHHHTTSEEE
T ss_pred hHHHHHHHHHHHHcCCEEEEEEEechh-hhcCC-CCccccccCCcCCcccHHHHHHHHHHHHHHHHhhcCCccccceeEE
Confidence 688999999999999999999865432 11111 11112211 22457889888888888775421 11 2599
Q ss_pred ccCCCCCCC----CChhHHHHHHHHHHHHHHhcCCCcEEEEeCC--CCCCc------chhhhhcccCcCCCCCEEEEEee
Q 008330 212 LRNELRGPK----QNVKDWYRYMQLGAEAVHAANPEVLVILSGL--NFDKD------LSFVRNQAVNLTFTGKLVFEAHW 279 (570)
Q Consensus 212 L~NEP~~~~----~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~--~w~~d------l~~~~~~p~~l~~~~nlVys~H~ 279 (570)
+.|||.... ....++.++++.++++||+++|...| +|+ .++.. +.+...+.+.++ .+|+|.
T Consensus 161 iWNEPd~~~f~~~~~~~ey~~ly~~~~~~iK~~~p~~~v--GGp~~~~~~~~~~~~~l~~~~~~~~~~D-----fiS~H~ 233 (486)
T PF01229_consen 161 IWNEPDLKDFWWDGTPEEYFELYDATARAIKAVDPELKV--GGPAFAWAYDEWCEDFLEFCKGNNCPLD-----FISFHS 233 (486)
T ss_dssp ESS-TTSTTTSGGG-HHHHHHHHHHHHHHHHHH-TTSEE--EEEEEETT-THHHHHHHHHHHHCT---S-----EEEEEE
T ss_pred eCcCCCcccccCCCCHHHHHHHHHHHHHHHHHhCCCCcc--cCccccccHHHHHHHHHHHHhcCCCCCC-----EEEEEe
Confidence 999998642 24567889999999999999999864 444 34321 122333222222 579999
Q ss_pred cCCCCCCCCCCCCCcchh---hHHHHHHHHHHHHHHh---cCCCeEEeccccCCCCCC-cchHHHHHHH-HH-HHHHCC-
Q 008330 280 YGFTDGQAWVDGNPNQVC---GRVVDNVMRLSGFLLE---QGWPLFVSEFGADLRGNN-VNDNRYLNCF-FG-VAAELD- 349 (570)
Q Consensus 280 Y~~~~~~~w~~~~~~~~~---~~~~~~~~~~~g~l~~---~g~Pv~iGEFG~~~~~~~-~~~~~~~~~~-~~-~~~~~g- 349 (570)
|+...... ......... ..+...+......+.+ -.+|+.++||+......+ ..|..|..++ +. .++..+
T Consensus 234 y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~~~~tE~n~~~~~~~~~~dt~~~aA~i~k~lL~~~~~ 312 (486)
T PF01229_consen 234 YGTDSAED-INENMYERIEDSRRLFPELKETRPIINDEADPNLPLYITEWNASISPRNPQHDTCFKAAYIAKNLLSNDGA 312 (486)
T ss_dssp E-BESESE--SS-EEEEB--HHHHHHHHHHHHHHHHTSSSTT--EEEEEEES-SSTT-GGGGSHHHHHHHHH-HHHHGGG
T ss_pred cccccccc-cchhHHhhhhhHHHHHHHHHHHHHHHhhccCCCCceeecccccccCCCcchhccccchhhHHHHHHHhhhh
Confidence 98432100 000000111 1122223222233333 357799999998765443 2343443333 22 233333
Q ss_pred -Cc-eEEeccCceeecccCccC--CCceeeeecCCCCCccchhHHHHHHhcccc
Q 008330 350 -WD-WALWTLVGSYYLREGVIG--LNEYYGLFDWNWCDIRNSSFLERISSLQSP 399 (570)
Q Consensus 350 -ig-w~~W~~~G~y~~r~~~~~--~~et~Gll~~dw~~~~~~~~~~~~~~l~~~ 399 (570)
++ ..||++..-+.-. +++. --..+||++.+ ..+-|.+ ..++.|.++
T Consensus 313 ~l~~~sywt~sD~Fee~-~~~~~pf~ggfGLlt~~--gI~KPa~-~A~~~L~~l 362 (486)
T PF01229_consen 313 FLDSFSYWTFSDRFEEN-GTPRKPFHGGFGLLTKL--GIPKPAY-YAFQLLNKL 362 (486)
T ss_dssp T-SEEEES-SBS---TT-SS-SSSSSS-S-SEECC--CEE-HHH-HHHHHHTT-
T ss_pred hhhhhhccchhhhhhcc-CCCCCceecchhhhhcc--CCCchHH-HHHHHHHhh
Confidence 34 6899986433211 1111 12458999887 5555543 244444443
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A. |
| >PRK09593 arb 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=98.07 E-value=3.7e-05 Score=84.80 Aligned_cols=109 Identities=10% Similarity=0.071 Sum_probs=81.7
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|++||+|+-|+.++|.-+.++ |. +...++..++.++++|+++.++||.
T Consensus 75 y~eDi~Lm~~lG~~aYRfSIsWsRI~P~---------------------G~----~~~~N~~gl~~Y~~lId~L~~~GI~ 129 (478)
T PRK09593 75 YKEDIALFAEMGFKTYRMSIAWTRIFPK---------------------GD----ELEPNEAGLQFYEDIFKECHKYGIE 129 (478)
T ss_pred hHHHHHHHHHcCCCEEEEecchhhcccC---------------------CC----CCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 6899999999999999999999766542 10 1113567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.||.+|+.. |.|... .-.||-+.. ..+.|.++-+.++++|++.-. -+=.+|||.
T Consensus 130 P~VTL~H~dlP~~L~~--~~GGW~n~~--~v~~F~~YA~~~~~~fgdrVk--~WiT~NEP~ 184 (478)
T PRK09593 130 PLVTITHFDCPMHLIE--EYGGWRNRK--MVGFYERLCRTLFTRYKGLVK--YWLTFNEIN 184 (478)
T ss_pred EEEEecccCCCHHHHh--hcCCCCChH--HHHHHHHHHHHHHHHhcCcCC--EEEeecchh
Confidence 999998754 555321 113554432 368899999999999999622 345778885
|
|
| >PLN03059 beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00012 Score=84.32 Aligned_cols=172 Identities=13% Similarity=0.095 Sum_probs=108.3
Q ss_pred CCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhh
Q 008330 37 LPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSF 116 (570)
Q Consensus 37 ~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~ 116 (570)
..++.+++.|+ -+|+|++|.+--..-+. ++..+ .++.++.||++|+|+|=.-+.|.+.++.
T Consensus 28 ~~v~~d~~~f~-idG~p~~i~sG~iHY~R---~~p~~----W~d~L~k~Ka~GlNtV~tYV~Wn~HEp~----------- 88 (840)
T PLN03059 28 ASVSYDHRAFI-INGQRRILISGSIHYPR---STPEM----WPDLIQKAKDGGLDVIQTYVFWNGHEPS----------- 88 (840)
T ss_pred eEEEEeCCEEE-ECCEEEEEEEeCcccCc---CCHHH----HHHHHHHHHHcCCCeEEEEecccccCCC-----------
Confidence 36888888764 48999999765532221 23323 4788999999999999987776655431
Q ss_pred hhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCC--CCC-C-CC-----CCC-
Q 008330 117 QKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGN--GFF-G-DQ-----YFN- 186 (570)
Q Consensus 117 ~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgn--g~~-~-d~-----~~~- 186 (570)
|...+-+...-|.+.|+.|++.||||||= ++.+.|+.-+.- +.| - ++ ..+
T Consensus 89 ----------------~G~~dF~G~~DL~~Fl~la~e~GLyvilR----pGPYIcAEw~~GGlP~WL~~~~~i~~Rs~d~ 148 (840)
T PLN03059 89 ----------------PGNYYFEDRYDLVKFIKVVQAAGLYVHLR----IGPYICAEWNFGGFPVWLKYVPGIEFRTDNG 148 (840)
T ss_pred ----------------CCeeeccchHHHHHHHHHHHHcCCEEEec----CCcceeeeecCCCCchhhhcCCCcccccCCH
Confidence 11122233455899999999999999995 334555533221 223 1 10 011
Q ss_pred --HHHHHHHHHHHHHHhCC-------CCcEEEEeccCCCCCCCC---ChhHHHHHHHHHHHHHHhcCCCcEEEEe
Q 008330 187 --PDLWIKGLTKMATIFNG-------VRNVVGMSLRNELRGPKQ---NVKDWYRYMQLGAEAVHAANPEVLVILS 249 (570)
Q Consensus 187 --~~~~~~~w~~iA~ryk~-------~p~Vig~dL~NEP~~~~~---~~~~W~~~~~~~~~aIr~~dp~~lIiVe 249 (570)
.++..++++.|+.+.+. --.||++.+=||= +... ...+ ..|++.+.+..++.+-+++.+..
T Consensus 149 ~fl~~v~~~~~~l~~~l~~~~l~~~~GGPIImvQIENEY-Gs~~~~~~~~d-~~Yl~~l~~~~~~~Gi~VPl~t~ 221 (840)
T PLN03059 149 PFKAAMQKFTEKIVDMMKSEKLFEPQGGPIILSQIENEY-GPVEWEIGAPG-KAYTKWAADMAVKLGTGVPWVMC 221 (840)
T ss_pred HHHHHHHHHHHHHHHHHhhcceeecCCCcEEEEEecccc-cceecccCcch-HHHHHHHHHHHHHcCCCcceEEC
Confidence 23445667777777642 2358999999994 3210 0112 56788888888888887766553
|
|
| >PRK13511 6-phospho-beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=3.4e-05 Score=84.99 Aligned_cols=108 Identities=17% Similarity=0.124 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 77 PMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
..+++++.|+++|+|+-|+.++|.-+.++ |. .-.+...++.++++|+++.++||
T Consensus 55 ry~eDi~L~~~lG~~~yRfSIsWsRI~P~---------------------G~-----g~vN~~gl~~Y~~lid~l~~~GI 108 (469)
T PRK13511 55 RYPEDLKLAEEFGVNGIRISIAWSRIFPD---------------------GY-----GEVNPKGVEYYHRLFAECHKRHV 108 (469)
T ss_pred hhHHHHHHHHHhCCCEEEeeccHhhcCcC---------------------CC-----CCcCHHHHHHHHHHHHHHHHcCC
Confidence 36899999999999999999999766542 10 11356789999999999999999
Q ss_pred EEEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCC
Q 008330 157 MVILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218 (570)
Q Consensus 157 ~VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~ 218 (570)
..+|.+|+.. |.|... ..||.+.. ..+.|.++-+.++++|++ |--+=.+|||..
T Consensus 109 ~P~VTL~H~dlP~~L~~---~GGW~n~~--~v~~F~~YA~~~~~~fgd---Vk~W~T~NEP~~ 163 (469)
T PRK13511 109 EPFVTLHHFDTPEALHS---NGDWLNRE--NIDHFVRYAEFCFEEFPE---VKYWTTFNEIGP 163 (469)
T ss_pred EEEEEecCCCCcHHHHH---cCCCCCHH--HHHHHHHHHHHHHHHhCC---CCEEEEccchhh
Confidence 9999998754 655432 23655433 368899999999999999 333668999963
|
|
| >TIGR01233 lacG 6-phospho-beta-galactosidase | Back alignment and domain information |
|---|
Probab=97.97 E-value=5.6e-05 Score=83.21 Aligned_cols=136 Identities=12% Similarity=0.035 Sum_probs=97.1
Q ss_pred hHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 77 PMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
..+++++.|+++|+|+-|+.++|.-+.++. . .-.+...++.++++|+++.++||
T Consensus 54 ry~eDi~L~~~lG~~~yRfSIsWsRI~P~g---------------------~-----~~~N~~gl~~Y~~lid~l~~~GI 107 (467)
T TIGR01233 54 KYPVDLELAEEYGVNGIRISIAWSRIFPTG---------------------Y-----GEVNEKGVEFYHKLFAECHKRHV 107 (467)
T ss_pred hHHHHHHHHHHcCCCEEEEecchhhccCCC---------------------C-----CCcCHHHHHHHHHHHHHHHHcCC
Confidence 368999999999999999999997665521 0 11356789999999999999999
Q ss_pred EEEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCC------------C-C
Q 008330 157 MVILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPK------------Q-N 222 (570)
Q Consensus 157 ~VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~------------~-~ 222 (570)
..||.+|+.. |.|... ..||-+.. ..+.|.++-+.++++|++ |--+=.+|||.... . .
T Consensus 108 ~P~VTL~H~dlP~~L~~---~GGW~n~~--~v~~F~~YA~~~f~~fgd---Vk~WiT~NEP~~~~~~gy~~G~~~Pg~~~ 179 (467)
T TIGR01233 108 EPFVTLHHFDTPEALHS---NGDFLNRE--NIEHFIDYAAFCFEEFPE---VNYWTTFNEIGPIGDGQYLVGKFPPGIKY 179 (467)
T ss_pred EEEEeccCCCCcHHHHH---cCCCCCHH--HHHHHHHHHHHHHHHhCC---CCEEEEecchhhhhhccchhcccCCCccc
Confidence 9999998764 555422 23555432 478899999999999985 43466899996421 0 1
Q ss_pred -hhHHH-------HHHHHHHHHHHhcCCCcEE
Q 008330 223 -VKDWY-------RYMQLGAEAVHAANPEVLV 246 (570)
Q Consensus 223 -~~~W~-------~~~~~~~~aIr~~dp~~lI 246 (570)
...-+ ....++++++|+.+|+..|
T Consensus 180 ~~~~~~~a~hn~l~AHa~A~~~~~~~~~~~~I 211 (467)
T TIGR01233 180 DLAKVFQSHHNMMVSHARAVKLYKDKGYKGEI 211 (467)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 10111 1225778889988887443
|
This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation. |
| >PRK09589 celA 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=97.86 E-value=4.8e-05 Score=83.91 Aligned_cols=109 Identities=10% Similarity=0.059 Sum_probs=80.8
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|++||+|+-|+.++|.-+.++. . +...++..++.++++|+++.++||.
T Consensus 69 y~eDi~Lm~~lG~~~yRfSIsWsRI~P~G---------------------~----~~~~N~~gl~~Y~~lid~L~~~GI~ 123 (476)
T PRK09589 69 YKEDIALFAEMGFKCFRTSIAWTRIFPQG---------------------D----ELEPNEEGLQFYDDLFDECLKQGIE 123 (476)
T ss_pred hHHHHHHHHHcCCCEEEeccchhhcCcCC---------------------C----CCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 68999999999999999999997665521 0 0113567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.||.+|+.. |.|.... -.||-+.. ..+.|.++-+.++++|++.-. -+=.+|||.
T Consensus 124 P~VTL~H~dlP~~L~~~--yGGW~n~~--~i~~F~~YA~~~f~~fgdrVk--~WiT~NEp~ 178 (476)
T PRK09589 124 PVVTLSHFEMPYHLVTE--YGGWRNRK--LIDFFVRFAEVVFTRYKDKVK--YWMTFNEIN 178 (476)
T ss_pred EEEEecCCCCCHHHHHh--cCCcCChH--HHHHHHHHHHHHHHHhcCCCC--EEEEecchh
Confidence 999998754 5443211 13554432 468899999999999998622 244678875
|
|
| >PLN02998 beta-glucosidase | Back alignment and domain information |
|---|
Probab=97.85 E-value=4.5e-05 Score=84.40 Aligned_cols=109 Identities=12% Similarity=0.081 Sum_probs=82.6
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|++||+|+-|+.++|.-+.++ |. .-.|...++.++++|+++.++||.
T Consensus 84 y~EDi~lmk~lG~~~YRfSIsWsRI~P~---------------------G~-----g~vN~~gl~~Y~~lid~L~~~GIe 137 (497)
T PLN02998 84 YKEDVKLMADMGLEAYRFSISWSRLLPS---------------------GR-----GPINPKGLQYYNNLIDELITHGIQ 137 (497)
T ss_pred hHHHHHHHHHcCCCeEEeeccHHhcCcC---------------------CC-----CCcCHHHHHHHHHHHHHHHHcCCc
Confidence 6899999999999999999999766552 10 113667899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~ 218 (570)
.||.+|+.. |.|.... -.||-+.+ ..+.|.++-+.++++|++.-. -+=.+|||..
T Consensus 138 P~VTL~H~dlP~~L~~~--yGGW~n~~--~v~~F~~YA~~~~~~fgdrVk--~WiT~NEP~~ 193 (497)
T PLN02998 138 PHVTLHHFDLPQALEDE--YGGWLSQE--IVRDFTAYADTCFKEFGDRVS--HWTTINEVNV 193 (497)
T ss_pred eEEEecCCCCCHHHHHh--hCCcCCch--HHHHHHHHHHHHHHHhcCcCC--EEEEccCcch
Confidence 999998754 5543211 13555433 468899999999999999622 3457888873
|
|
| >PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.85 E-value=1.6e-05 Score=87.48 Aligned_cols=139 Identities=13% Similarity=0.086 Sum_probs=95.0
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|+.|+.++|..+.++. .....+...++.++++|+.+.++||.
T Consensus 60 y~eDi~l~~~lg~~~yRfsi~W~Ri~P~g-------------------------~~g~~n~~~~~~Y~~~i~~l~~~gi~ 114 (455)
T PF00232_consen 60 YKEDIALMKELGVNAYRFSISWSRIFPDG-------------------------FEGKVNEEGLDFYRDLIDELLENGIE 114 (455)
T ss_dssp HHHHHHHHHHHT-SEEEEE--HHHHSTTS-------------------------SSSSS-HHHHHHHHHHHHHHHHTT-E
T ss_pred hhHHHHHHHhhccceeeeecchhheeecc-------------------------cccccCHhHhhhhHHHHHHHHhhccc
Confidence 58999999999999999999997766521 01224567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCC-------------CCh
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPK-------------QNV 223 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~-------------~~~ 223 (570)
.||.+|+.. |.|... -.||-+ + ...+.|.++-+.++++|++.-. -+=.+|||.... .+.
T Consensus 115 P~vtL~H~~~P~~l~~---~ggw~~-~-~~~~~F~~Ya~~~~~~~gd~V~--~w~T~NEp~~~~~~~y~~g~~~p~~~~~ 187 (455)
T PF00232_consen 115 PIVTLYHFDLPLWLED---YGGWLN-R-ETVDWFARYAEFVFERFGDRVK--YWITFNEPNVFALLGYLYGGFPPGRDSL 187 (455)
T ss_dssp EEEEEESS--BHHHHH---HTGGGS-T-HHHHHHHHHHHHHHHHHTTTBS--EEEEEETHHHHHHHHHTSSSSTTCSSTH
T ss_pred eeeeeeecccccceee---cccccC-H-HHHHHHHHHHHHHHHHhCCCcc--eEEeccccceeecccccccccccccccc
Confidence 999998753 555321 123333 2 2478999999999999999733 355789997521 111
Q ss_pred hHH-------HHHHHHHHHHHHhcCCCcEEEE
Q 008330 224 KDW-------YRYMQLGAEAVHAANPEVLVIL 248 (570)
Q Consensus 224 ~~W-------~~~~~~~~~aIr~~dp~~lIiV 248 (570)
... .....++++++|+..|+.-|-+
T Consensus 188 ~~~~~~~h~~l~AHa~A~~~~~~~~~~~~IGi 219 (455)
T PF00232_consen 188 KAFYQAAHNLLLAHAKAVKAIKEKYPDGKIGI 219 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCTSEEEE
T ss_pred chhhHHHhhHHHHHHHHHHHHhhcccceEEec
Confidence 222 2233578899999988866644
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A .... |
| >PF00652 Ricin_B_lectin: Ricin-type beta-trefoil lectin domain; InterPro: IPR000772 Ricin is a legume lectin from the seeds of the castor bean plant, Ricinus communis | Back alignment and domain information |
|---|
Probab=97.85 E-value=2.2e-05 Score=69.27 Aligned_cols=93 Identities=27% Similarity=0.626 Sum_probs=66.3
Q ss_pred Cceeeeec---CCCCceecCCCCCC--CCccccCCcceeecccc-eEEeeccCC--ccceeccccC-C-CCCceeEeecc
Q 008330 419 TGLCVQRK---SFLDPLTLGPCTES--EAWSYTPHKTISLKGAY-FCLQAKHVG--KPAKLGIICT-D-CGSTWEIISDS 488 (570)
Q Consensus 419 tg~c~~~~---~~~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~-~cl~a~~~g--~~~~~~~~c~-~-~~~~W~~~s~~ 488 (570)
+|+|+++. ....++.+.+|..+ +.|.++..+.|...... +||++.+.+ .++.+ ..|. . .+|+|.+..+.
T Consensus 11 ~~~cl~~~~~~~~~~~v~l~~c~~~~~Q~w~~~~~~~i~~~~~~~~CL~~~~~~~~~~i~l-~~C~~~~~~Q~W~~~~~~ 89 (124)
T PF00652_consen 11 SGLCLDVQGSTKNGSPVVLYPCDGSDNQLWRFDPDGQIRSNNNPNLCLDVDGSSPGTKIVL-WPCDSNSSNQRWKFDPDG 89 (124)
T ss_dssp GGEEEEEGGSSSTTTBEEEEE--SSGGGEEEEETTSBEEETTETTEEEEESSSSTTEBEEE-EETTTTGGGGBEEEETTS
T ss_pred CCCeEEEcCCCCCCCEEEEEECCCCCceeEEEcCCCceeeccCcceEEEeeccCCCceEEE-eeccCCccCCeEEEcCCe
Confidence 99999997 22356999999995 68999999877765543 599999976 55566 8888 3 34899998844
Q ss_pred ccEEEEecCCCceEEEeecC--C-Cceeecce
Q 008330 489 KMHLSSKADNGTTVCLDVDS--S-NTIVTNTC 517 (570)
Q Consensus 489 ~~~~~~~~~~~~~~cld~~~--~-~~~~~~~c 517 (570)
. |... .+.+|||+.. + +.++.+.|
T Consensus 90 ~--i~n~---~s~~cL~~~~~~~~~~l~~~~c 116 (124)
T PF00652_consen 90 R--IRNK---NSGLCLDVKGGSDGNPLVLWPC 116 (124)
T ss_dssp B--EEET---TTTEEEEEGGGSTTEBEEEEE-
T ss_pred e--EEeC---CCCEEEEecCCCCCCEEEEEEC
Confidence 4 4323 3789999984 4 47777866
|
The seeds are poisonous to people, animals and insects and just one milligram of ricin can kill an adult. Primary structure analysis has shown the presence of a similar domain in many carbohydrate-recognition proteins like plant and bacterial AB-toxins, glycosidases or proteases [, , ]. This domain, known as the ricin B lectin domain, can be present in one or more copies and has been shown in some instance to bind simple sugars, such as galactose or lactose. The ricin B lectin domain is composed of three homologous subdomains of 40 amino acids (alpha, beta and gamma) and a linker peptide of around 15 residues (lambda). It has been proposed that the ricin B lectin domain arose by gene triplication from a primitive 40 residue galactoside-binding peptide [, ]. The most characteristic, though not completely conserved, sequence feature is the presence of a Q-W pattern. Consequently, the ricin B lectin domain as also been refered as the (QxW)3 domain and the three homologous regions as the QxW repeats [, ]. A disulphide bond is also conserved in some of the QxW repeats []. The 3D structure of the ricin B chain has shown that the three QxW repeats pack around a pseudo threefold axis that is stabilised by the lambda linker []. The ricin B lectin domain has no major segments of a helix or beta sheet but each of the QxW repeats contains an omega loop []. An idealized omega-loop is a compact, contiguous segment of polypeptide that traces a 'loop-shaped' path in three-dimensional space; the main chain resembles a Greek omega.; PDB: 2VLC_B 3A22_B 3A21_B 3A23_B 1GGP_B 1VCL_A 2Z48_B 2Z49_A 2D7R_A 2D7I_A .... |
| >PLN02814 beta-glucosidase | Back alignment and domain information |
|---|
Probab=97.85 E-value=4.8e-05 Score=84.36 Aligned_cols=108 Identities=10% Similarity=0.054 Sum_probs=81.8
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.||++|+|+-|+.++|.-+.++ |. .-.|+..++.++++|+++.++||.
T Consensus 79 y~EDI~L~k~lG~~ayRfSIsWsRI~P~---------------------G~-----g~~N~~Gl~fY~~lId~l~~~GI~ 132 (504)
T PLN02814 79 YKEDVKLMAEMGLESFRFSISWSRLIPN---------------------GR-----GLINPKGLLFYKNLIKELRSHGIE 132 (504)
T ss_pred hHHHHHHHHHcCCCEEEEeccHhhcCcC---------------------CC-----CCCCHHHHHHHHHHHHHHHHcCCc
Confidence 6899999999999999999999766542 10 113667999999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.||.+|+.. |.|.... -.||-+.+ ..+.|.++-+.++++|++.-. -+=.+|||.
T Consensus 133 P~VTL~H~dlP~~L~~~--yGGW~n~~--~i~~F~~YA~~~f~~fgdrVk--~WiT~NEP~ 187 (504)
T PLN02814 133 PHVTLYHYDLPQSLEDE--YGGWINRK--IIEDFTAFADVCFREFGEDVK--LWTTINEAT 187 (504)
T ss_pred eEEEecCCCCCHHHHHh--cCCcCChh--HHHHHHHHHHHHHHHhCCcCC--EEEeccccc
Confidence 999998754 5553211 13554432 468899999999999999622 344688886
|
|
| >PLN02849 beta-glucosidase | Back alignment and domain information |
|---|
Probab=97.79 E-value=6.4e-05 Score=83.31 Aligned_cols=109 Identities=11% Similarity=0.061 Sum_probs=82.3
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.||++|+|+-|+.++|.-+.++ |. .-.|+..++.++++|+++.++||.
T Consensus 81 Y~eDI~Lm~~lG~~aYRfSIsWsRI~P~---------------------G~-----g~vN~~gl~fY~~lid~l~~~GI~ 134 (503)
T PLN02849 81 YKEDVKLMVETGLDAFRFSISWSRLIPN---------------------GR-----GSVNPKGLQFYKNFIQELVKHGIE 134 (503)
T ss_pred HHHHHHHHHHcCCCeEEEeccHHhcCcC---------------------CC-----CCCCHHHHHHHHHHHHHHHHcCCe
Confidence 6899999999999999999999766542 10 113567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~ 218 (570)
.||.+|+.. |.|.... -.||-+.. ..+.|.++-+.++++|++.-. -+=.+|||..
T Consensus 135 P~VTL~H~dlP~~L~~~--yGGW~nr~--~v~~F~~YA~~~f~~fgDrVk--~WiT~NEP~~ 190 (503)
T PLN02849 135 PHVTLFHYDHPQYLEDD--YGGWINRR--IIKDFTAYADVCFREFGNHVK--FWTTINEANI 190 (503)
T ss_pred EEEeecCCCCcHHHHHh--cCCcCCch--HHHHHHHHHHHHHHHhcCcCC--EEEEecchhh
Confidence 999998754 5553211 13554432 478899999999999999632 2456888863
|
|
| >COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00085 Score=76.12 Aligned_cols=131 Identities=18% Similarity=0.272 Sum_probs=86.7
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGI 128 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~ 128 (570)
+|+++.+.|.-.. |+-+.....++.++.||++|+|+||+ .++|..++++. |.
T Consensus 11 dg~~~~l~gG~y~-------p~~~p~~~w~ddl~~mk~~G~N~V~ig~faW~~~eP~e--------------------G~ 63 (673)
T COG1874 11 DGRRILLYGGDYY-------PERWPRETWMDDLRKMKALGLNTVRIGYFAWNLHEPEE--------------------GK 63 (673)
T ss_pred CCceeEEeccccC-------hHHCCHHHHHHHHHHHHHhCCCeeEeeeEEeeccCccc--------------------cc
Confidence 7899999988643 22222244688999999999999999 89987766520 11
Q ss_pred ccCCCCCCCchHHHHHHHH-HHHHhcCCCEEEEecC--CCCCCccccCC------CCC------CCC-----CCCCCCHH
Q 008330 129 QSNNPSIVDLPLIKAFQAV-VASLGNNNVMVILDNH--ISKPGWCCSNS------DGN------GFF-----GDQYFNPD 188 (570)
Q Consensus 129 ~~~nP~~~~~t~l~~ld~v-V~~a~~~Gl~VILD~H--~~~~~w~~~~~------dgn------g~~-----~d~~~~~~ 188 (570)
.+-+ -+|.+ ++.|.+.|+||||-.- ...|.|-...- +.+ +-+ .+. +..+
T Consensus 64 -------fdf~---~~D~~~l~~a~~~Gl~vil~t~P~g~~P~Wl~~~~PeiL~~~~~~~~~~~g~r~~~~~~~~-~Yr~ 132 (673)
T COG1874 64 -------FDFT---WLDEIFLERAYKAGLYVILRTGPTGAPPAWLAKKYPEILAVDENGRVRSDGARENICPVSP-VYRE 132 (673)
T ss_pred -------cCcc---cchHHHHHHHHhcCceEEEecCCCCCCchHHhcCChhheEecCCCcccCCCcccccccccH-HHHH
Confidence 1222 34455 9999999999999762 23345532110 001 101 111 1234
Q ss_pred HHHHHHHHHHHH-hCCCCcEEEEeccCCCCC
Q 008330 189 LWIKGLTKMATI-FNGVRNVVGMSLRNELRG 218 (570)
Q Consensus 189 ~~~~~w~~iA~r-yk~~p~Vig~dL~NEP~~ 218 (570)
....+.++|++| |++.++|+++-+=||=.+
T Consensus 133 ~~~~i~~~irer~~~~~~~v~~w~~dneY~~ 163 (673)
T COG1874 133 YLDRILQQIRERLYGNGPAVITWQNDNEYGG 163 (673)
T ss_pred HHHHHHHHHHHHHhccCCceeEEEccCccCC
Confidence 455678889999 999999999999998544
|
|
| >COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.072 Score=53.60 Aligned_cols=177 Identities=15% Similarity=0.154 Sum_probs=103.7
Q ss_pred HHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCCCcEEEEeccCCCCCC
Q 008330 143 AFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATI---FNGVRNVVGMSLRNELRGP 219 (570)
Q Consensus 143 ~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~r---yk~~p~Vig~dL~NEP~~~ 219 (570)
.|+.+..++.+.|++|+|-+.-.+ | -.++.++ ++... |.+.+.|..+-+-||.-..
T Consensus 88 ~le~v~pAa~~~g~kv~lGiw~td--------d-------~~~~~~~------til~ay~~~~~~d~v~~v~VGnEal~r 146 (305)
T COG5309 88 TLENVLPAAEASGFKVFLGIWPTD--------D-------IHDAVEK------TILSAYLPYNGWDDVTTVTVGNEALNR 146 (305)
T ss_pred hhhhhHHHHHhcCceEEEEEeecc--------c-------hhhhHHH------HHHHHHhccCCCCceEEEEechhhhhc
Confidence 378899999999999999654321 1 1122221 23333 4566789999999998543
Q ss_pred C-CChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhh
Q 008330 220 K-QNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCG 298 (570)
Q Consensus 220 ~-~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~ 298 (570)
+ -+..+.-.++.++-.++.+.+-+..|.--. .|.- +.++|.-...-+-++...|.|..... ..+.-.
T Consensus 147 ~~~tasql~~~I~~vrsav~~agy~gpV~T~d-sw~~----~~~np~l~~~SDfia~N~~aYwd~~~-------~a~~~~ 214 (305)
T COG5309 147 NDLTASQLIEYIDDVRSAVKEAGYDGPVTTVD-SWNV----VINNPELCQASDFIAANAHAYWDGQT-------VANAAG 214 (305)
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCCceeecc-ccee----eeCChHHhhhhhhhhcccchhccccc-------hhhhhh
Confidence 3 256788888888878888776665533221 1211 11122111123567777888853221 000011
Q ss_pred H-HHHHHHHHHHHHHh-cCCCeEEeccccCCCCCCc--------chHHHHHHHHHHHHHCCCceEE
Q 008330 299 R-VVDNVMRLSGFLLE-QGWPLFVSEFGADLRGNNV--------NDNRYLNCFFGVAAELDWDWAL 354 (570)
Q Consensus 299 ~-~~~~~~~~~g~l~~-~g~Pv~iGEFG~~~~~~~~--------~~~~~~~~~~~~~~~~gigw~~ 354 (570)
. +.+.+.+... .. ..++++|+|-|.+.++... +...+++.++.-+++.|++-++
T Consensus 215 ~f~~~q~e~vqs--a~g~~k~~~v~EtGWPS~G~~~G~a~pS~anq~~~~~~i~~~~~~~G~d~fv 278 (305)
T COG5309 215 TFLLEQLERVQS--ACGTKKTVWVTETGWPSDGRTYGSAVPSVANQKIAVQEILNALRSCGYDVFV 278 (305)
T ss_pred HHHHHHHHHHHH--hcCCCccEEEeeccCCCCCCccCCcCCChhHHHHHHHHHHhhhhccCccEEE
Confidence 1 1122222111 11 3489999999999876532 2468888889889999998653
|
|
| >PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0022 Score=55.76 Aligned_cols=76 Identities=16% Similarity=0.270 Sum_probs=53.1
Q ss_pred CCCccccC----Cc--ceeecccceEEeeccC----CccceeccccC-CCCCceeEeeccccEEEEecCCCceEEEeecC
Q 008330 440 SEAWSYTP----HK--TISLKGAYFCLQAKHV----GKPAKLGIICT-DCGSTWEIISDSKMHLSSKADNGTTVCLDVDS 508 (570)
Q Consensus 440 ~~~W~~~~----~~--~~~~~~~~~cl~a~~~----g~~~~~~~~c~-~~~~~W~~~s~~~~~~~~~~~~~~~~cld~~~ 508 (570)
+++|.+++ .+ .|+-+.+++||++.+. |.++.+ ..|. .++|+|++...++.+...+.. .+.+|||+.+
T Consensus 2 nQ~W~~~~~~~~~g~Y~i~n~~sg~~L~v~~~~~~~g~~v~~-~~~~~~~~Q~W~i~~~~~g~y~I~n~-~s~~~Ldv~~ 79 (105)
T PF14200_consen 2 NQQWTFTPVGDSDGYYKIRNVNSGKYLDVAGGSTANGTNVQQ-WTCNGNDNQQWKIEPVGDGYYRIRNK-NSGKVLDVAG 79 (105)
T ss_dssp GGEEEEEEEETTTTEEEEEETTTTEEEEEGCTTCSTTEBEEE-EESSSSGGGEEEEEESTTSEEEEEET-STTEEEEEGG
T ss_pred CCEEEEEEecCCCCEEEEEECCCCCEEEeCCCCcCCCcEEEE-ecCCCCcCcEEEEEEecCCeEEEEEC-CCCcEEEECC
Confidence 45777765 33 3555679999999885 444444 7776 788999998888765555433 6789999973
Q ss_pred ----CC-ceeecce
Q 008330 509 ----SN-TIVTNTC 517 (570)
Q Consensus 509 ----~~-~~~~~~c 517 (570)
+| +|+.+.|
T Consensus 80 ~~~~~g~~v~~~~~ 93 (105)
T PF14200_consen 80 GSTANGTNVQQWEY 93 (105)
T ss_dssp GSSSTTEBEEEEE-
T ss_pred CCCCCCCEEEEEeC
Confidence 45 6776777
|
... |
| >PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.12 Score=55.15 Aligned_cols=104 Identities=14% Similarity=0.039 Sum_probs=59.3
Q ss_pred HHHHHHhcCCCEEEEecCCCCCCccccCCCC----CCCCCCCCCCHHHHHHHHHHHHHHhCCCC-cEEEEeccCCCCCCC
Q 008330 146 AVVASLGNNNVMVILDNHISKPGWCCSNSDG----NGFFGDQYFNPDLWIKGLTKMATIFNGVR-NVVGMSLRNELRGPK 220 (570)
Q Consensus 146 ~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dg----ng~~~d~~~~~~~~~~~w~~iA~ryk~~p-~Vig~dL~NEP~~~~ 220 (570)
.++++|+++|+..++-+-.++|.|-+.+... .+--+-+.-..+.|..++..++++|+..- ++--++.+|||...+
T Consensus 108 wfL~~Ak~rGV~~f~aFSNSPP~~MT~NG~~~g~~~~~~NLk~d~y~~FA~YLa~Vv~~~~~~GI~f~~IsP~NEP~~~W 187 (384)
T PF14587_consen 108 WFLKAAKERGVNIFEAFSNSPPWWMTKNGSASGGDDGSDNLKPDNYDAFADYLADVVKHYKKWGINFDYISPFNEPQWNW 187 (384)
T ss_dssp HHHHHHHHTT---EEEE-SSS-GGGSSSSSSB-S-SSS-SS-TT-HHHHHHHHHHHHHHHHCTT--EEEEE--S-TTS-G
T ss_pred HHHHHHHHcCCCeEEEeecCCCHHHhcCCCCCCCCccccccChhHHHHHHHHHHHHHHHHHhcCCccceeCCcCCCCCCC
Confidence 4789999999999998888888775322111 01000011236889999999999995542 355689999998653
Q ss_pred ----C-----ChhHHHHHHHHHHHHHHhcCCCcEEEEe
Q 008330 221 ----Q-----NVKDWYRYMQLGAEAVHAANPEVLVILS 249 (570)
Q Consensus 221 ----~-----~~~~W~~~~~~~~~aIr~~dp~~lIiVe 249 (570)
| +.++-.+.++.+..++++.+.+..|.+.
T Consensus 188 ~~~~QEG~~~~~~e~a~vI~~L~~~L~~~GL~t~I~~~ 225 (384)
T PF14587_consen 188 AGGSQEGCHFTNEEQADVIRALDKALKKRGLSTKISAC 225 (384)
T ss_dssp G--SS-B----HHHHHHHHHHHHHHHHHHT-S-EEEEE
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEec
Confidence 1 2344456677777888888887766663
|
|
| >PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.013 Score=58.98 Aligned_cols=134 Identities=17% Similarity=0.203 Sum_probs=68.6
Q ss_pred HHHHHHHHhCCCCcEEEEeccCCCCCCCC---ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCC-----cchh----h
Q 008330 193 GLTKMATIFNGVRNVVGMSLRNELRGPKQ---NVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDK-----DLSF----V 260 (570)
Q Consensus 193 ~w~~iA~ryk~~p~Vig~dL~NEP~~~~~---~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~-----dl~~----~ 260 (570)
.++.+.+. +. .+--+..+|||....+ +.++-.+...+.++.+|. +...|+-....+.. .+.. +
T Consensus 55 ~~~~v~~~-~~--~~~~ll~fNEPD~~~qsn~~p~~aa~~w~~~~~~~~~--~~~~l~sPa~~~~~~~~~~g~~Wl~~F~ 129 (239)
T PF11790_consen 55 WLANVQNA-HP--GSKHLLGFNEPDLPGQSNMSPEEAAALWKQYMNPLRS--PGVKLGSPAVAFTNGGTPGGLDWLSQFL 129 (239)
T ss_pred HHHHHHhh-cc--CccceeeecCCCCCCCCCCCHHHHHHHHHHHHhHhhc--CCcEEECCeecccCCCCCCccHHHHHHH
Confidence 34555555 22 2223457899987653 222222223333344442 55555444443321 2222 2
Q ss_pred hhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCC---CCcchHHH
Q 008330 261 RNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRG---NNVNDNRY 337 (570)
Q Consensus 261 ~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~---~~~~~~~~ 337 (570)
..-+ ....--++++|+|... ...+...+.+.. ...+.||+|+|||+.... .......|
T Consensus 130 ~~~~---~~~~~D~iavH~Y~~~-------------~~~~~~~i~~~~---~~~~kPIWITEf~~~~~~~~~~~~~~~~f 190 (239)
T PF11790_consen 130 SACA---RGCRVDFIAVHWYGGD-------------ADDFKDYIDDLH---NRYGKPIWITEFGCWNGGSQGSDEQQASF 190 (239)
T ss_pred Hhcc---cCCCccEEEEecCCcC-------------HHHHHHHHHHHH---HHhCCCEEEEeecccCCCCCCCHHHHHHH
Confidence 2211 0112347899999321 122333333211 225699999999986421 22335689
Q ss_pred HHHHHHHHHHCCC
Q 008330 338 LNCFFGVAAELDW 350 (570)
Q Consensus 338 ~~~~~~~~~~~gi 350 (570)
++.++.++++...
T Consensus 191 l~~~~~~ld~~~~ 203 (239)
T PF11790_consen 191 LRQALPWLDSQPY 203 (239)
T ss_pred HHHHHHHHhcCCC
Confidence 9999999988753
|
|
| >COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.094 Score=54.26 Aligned_cols=164 Identities=14% Similarity=0.291 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHhcCCCEEE---EecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 141 IKAFQAVVASLGNNNVMVI---LDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VI---LD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
|++-|++++.|++|||.+= |=.|...|.|..+.. +..+ ...+...+....|+.|||+. |+.+|+.|||.
T Consensus 81 Fe~AD~ia~FAr~h~m~lhGHtLvW~~q~P~W~~~~e-----~~~~-~~~~~~e~hI~tV~~rYkg~--~~sWDVVNE~v 152 (345)
T COG3693 81 FEAADAIANFARKHNMPLHGHTLVWHSQVPDWLFGDE-----LSKE-ALAKMVEEHIKTVVGRYKGS--VASWDVVNEAV 152 (345)
T ss_pred ccchHHHHHHHHHcCCeeccceeeecccCCchhhccc-----cChH-HHHHHHHHHHHHHHHhccCc--eeEEEeccccc
Confidence 6778999999999999872 455666666643211 0001 11344456778899999998 88999999997
Q ss_pred CCCC--ChhHHHH------HHHHHHHHHHhcCCCcEEEEeCCCCCCc----------chhhhhcccCcCCCCCEEEEEee
Q 008330 218 GPKQ--NVKDWYR------YMQLGAEAVHAANPEVLVILSGLNFDKD----------LSFVRNQAVNLTFTGKLVFEAHW 279 (570)
Q Consensus 218 ~~~~--~~~~W~~------~~~~~~~aIr~~dp~~lIiVeG~~w~~d----------l~~~~~~p~~l~~~~nlVys~H~ 279 (570)
...+ ..+.|+. +++.+...-|+++|+.-.++-...-..+ +..+..+. ++. +-+=.--|+
T Consensus 153 dd~g~~R~s~w~~~~~gpd~I~~aF~~AreadP~AkL~~NDY~ie~~~~kr~~~~nlI~~LkekG--~pI-DgiG~QsH~ 229 (345)
T COG3693 153 DDQGSLRRSAWYDGGTGPDYIKLAFHIAREADPDAKLVINDYSIEGNPAKRNYVLNLIEELKEKG--API-DGIGIQSHF 229 (345)
T ss_pred CCCchhhhhhhhccCCccHHHHHHHHHHHhhCCCceEEeecccccCChHHHHHHHHHHHHHHHCC--CCc-cceeeeeee
Confidence 7422 2345664 6677778889999998888755321111 01111111 122 456667773
Q ss_pred cCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCC
Q 008330 280 YGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGN 330 (570)
Q Consensus 280 Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~ 330 (570)
=.... ..+.....+ ..+.+.|.|++|+|+-+...++
T Consensus 230 ~~~~~-----------~~~~~~~a~----~~~~k~Gl~i~VTELD~~~~~P 265 (345)
T COG3693 230 SGDGP-----------SIEKMRAAL----LKFSKLGLPIYVTELDMSDYTP 265 (345)
T ss_pred cCCCC-----------CHHHHHHHH----HHHhhcCCCceEEEeeeeccCC
Confidence 22111 112222222 2233469999999998876443
|
|
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.021 Score=54.32 Aligned_cols=140 Identities=8% Similarity=0.101 Sum_probs=91.1
Q ss_pred ChHHHHHHHHHHcCCcEEEecccccccccC-ccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 76 QPMDMLSKRVVDMGFNCVRLTWPLYLATND-SLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~-~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
...++.++.|+++|+++|=|-+.- ..+. .|+ .. . .++. .....-+.|+.++++|.++
T Consensus 20 ~~W~~~~~~m~~~GidtlIlq~~~--~~~~~~yp-----s~-------------~-~~~~-~~~~~~d~l~~~L~~A~~~ 77 (166)
T PF14488_consen 20 AQWREEFRAMKAIGIDTLILQWTG--YGGFAFYP-----SK-------------L-SPGG-FYMPPVDLLEMILDAADKY 77 (166)
T ss_pred HHHHHHHHHHHHcCCcEEEEEEee--cCCcccCC-----cc-------------c-cCcc-ccCCcccHHHHHHHHHHHc
Confidence 346899999999999999764331 1110 010 00 0 0111 1112345699999999999
Q ss_pred CCEEEEecCCCCCCccccCCCCCCCCCCCCCC--HHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHH
Q 008330 155 NVMVILDNHISKPGWCCSNSDGNGFFGDQYFN--PDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQL 232 (570)
Q Consensus 155 Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~--~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~ 232 (570)
||+|++-+...+. ||.+...+ .+.-...-+.|+++|+.++.+.|+=|=.|+.... ... ....+.
T Consensus 78 Gmkv~~Gl~~~~~-----------~w~~~~~~~~~~~~~~v~~el~~~yg~h~sf~GWYip~E~~~~~--~~~-~~~~~~ 143 (166)
T PF14488_consen 78 GMKVFVGLYFDPD-----------YWDQGDLDWEAERNKQVADELWQRYGHHPSFYGWYIPYEIDDYN--WNA-PERFAL 143 (166)
T ss_pred CCEEEEeCCCCch-----------hhhccCHHHHHHHHHHHHHHHHHHHcCCCCCceEEEecccCCcc--cch-HHHHHH
Confidence 9999998876543 33321111 1122356778899999999999999999997652 111 234466
Q ss_pred HHHHHHhcCCCcEEEEeCC
Q 008330 233 GAEAVHAANPEVLVILSGL 251 (570)
Q Consensus 233 ~~~aIr~~dp~~lIiVeG~ 251 (570)
..+.++++.|+.+|+|++.
T Consensus 144 l~~~lk~~s~~~Pv~ISpf 162 (166)
T PF14488_consen 144 LGKYLKQISPGKPVMISPF 162 (166)
T ss_pred HHHHHHHhCCCCCeEEecC
Confidence 7788888888999999874
|
|
| >smart00458 RICIN Ricin-type beta-trefoil | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0021 Score=56.09 Aligned_cols=70 Identities=21% Similarity=0.394 Sum_probs=52.7
Q ss_pred eeCCCCceeeeecCCC-CceecCCCCC---CCCccccCCcceeecccceEEeeccCCcc-ceeccccC-CCCCceeE
Q 008330 414 IYHPATGLCVQRKSFL-DPLTLGPCTE---SEAWSYTPHKTISLKGAYFCLQAKHVGKP-AKLGIICT-DCGSTWEI 484 (570)
Q Consensus 414 ~~~~~tg~c~~~~~~~-~~~~~~~c~~---~~~W~~~~~~~~~~~~~~~cl~a~~~g~~-~~~~~~c~-~~~~~W~~ 484 (570)
+++. +++|+++.+.. .++.+..|.. +++|.+..++.|....+++||++.+.... ......|. .++|+|.+
T Consensus 41 ~~~~-~~~Cl~~~~~~~~~v~l~~c~~~~~~Q~W~~~~~~~i~~~~~~~cl~~~~~~~~~~~~~~~c~~~~~Q~W~~ 116 (117)
T smart00458 41 IRIA-TDLCLTANGNTGSTVTLYSCDGDADNQYWTVNKDGTIRNPDSGLCLDVKDGNTGTKVILWTCNGNPNQKWIF 116 (117)
T ss_pred EEec-CCccCccCCCCCCEEEEEECCCCCcCCEEEECCCeeEEeCCCCEEEecCCCCCCceEEEEeCCCCccccEEe
Confidence 3444 88999985542 3689999976 37999998888887789999999876442 23347788 67899986
|
Carbohydrate-binding domain formed from presumed gene triplication. |
| >cd00161 RICIN Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0028 Score=55.14 Aligned_cols=65 Identities=22% Similarity=0.426 Sum_probs=51.7
Q ss_pred CceeeeecCC--CCceecCCCCC---CCCccccCCcceeecccceEEeeccC---CccceeccccC-CCCCceeE
Q 008330 419 TGLCVQRKSF--LDPLTLGPCTE---SEAWSYTPHKTISLKGAYFCLQAKHV---GKPAKLGIICT-DCGSTWEI 484 (570)
Q Consensus 419 tg~c~~~~~~--~~~~~~~~c~~---~~~W~~~~~~~~~~~~~~~cl~a~~~---g~~~~~~~~c~-~~~~~W~~ 484 (570)
+++|+++.+. ..++.+.+|.. +++|.+.+.+.|..+.+++||++.+. |.++.+ ..|. ..+|+|++
T Consensus 51 ~~~Cl~~~~~~~~~~~~~~~c~~~~~~Q~W~~~~~~~i~~~~~~~cl~~~~~~~~~~~v~~-~~c~~~~~Q~W~~ 124 (124)
T cd00161 51 SNLCLDVGGDAPGSKVRLYTCSGGSDNQRWTFNKDGTIRNLKSGKCLDVKGGNTNGTNLIL-WTCDGGPNQKWKF 124 (124)
T ss_pred CCeEEcccCCCCCCEEEEEECCCCCcCCEEEECCCcEEEECCCCeEEeCCCCCCCCCEEEE-EeCCCCccceEeC
Confidence 8999998543 24689999987 47999998888887778999999886 455555 8898 77899974
|
The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. |
| >PF00652 Ricin_B_lectin: Ricin-type beta-trefoil lectin domain; InterPro: IPR000772 Ricin is a legume lectin from the seeds of the castor bean plant, Ricinus communis | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0033 Score=55.27 Aligned_cols=70 Identities=24% Similarity=0.560 Sum_probs=55.1
Q ss_pred ceeeCCCCceeeeecCCC--CceecCCCCCC---CCccccCCcceeecccceEEeecc--CCccceeccccC-CCCCce
Q 008330 412 KVIYHPATGLCVQRKSFL--DPLTLGPCTES---EAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICT-DCGSTW 482 (570)
Q Consensus 412 ~~~~~~~tg~c~~~~~~~--~~~~~~~c~~~---~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~-~~~~~W 482 (570)
.+.......+|+.+.+.. .++.+.+|..+ +.|.+.+.+.|+-..+++||+..+ .+.++.+ ..|. +++|+|
T Consensus 47 ~i~~~~~~~~CL~~~~~~~~~~i~l~~C~~~~~~Q~W~~~~~~~i~n~~s~~cL~~~~~~~~~~l~~-~~c~~~~~Q~W 124 (124)
T PF00652_consen 47 QIRSNNNPNLCLDVDGSSPGTKIVLWPCDSNSSNQRWKFDPDGRIRNKNSGLCLDVKGGSDGNPLVL-WPCNGSPNQQW 124 (124)
T ss_dssp BEEETTETTEEEEESSSSTTEBEEEEETTTTGGGGBEEEETTSBEEETTTTEEEEEGGGSTTEBEEE-EE-TSSGGGBE
T ss_pred ceeeccCcceEEEeeccCCCceEEEeeccCCccCCeEEEcCCeeEEeCCCCEEEEecCCCCCCEEEE-EECCCCccccC
Confidence 455555556699986552 46999999986 699999977888777999999999 7888888 5887 778988
|
The seeds are poisonous to people, animals and insects and just one milligram of ricin can kill an adult. Primary structure analysis has shown the presence of a similar domain in many carbohydrate-recognition proteins like plant and bacterial AB-toxins, glycosidases or proteases [, , ]. This domain, known as the ricin B lectin domain, can be present in one or more copies and has been shown in some instance to bind simple sugars, such as galactose or lactose. The ricin B lectin domain is composed of three homologous subdomains of 40 amino acids (alpha, beta and gamma) and a linker peptide of around 15 residues (lambda). It has been proposed that the ricin B lectin domain arose by gene triplication from a primitive 40 residue galactoside-binding peptide [, ]. The most characteristic, though not completely conserved, sequence feature is the presence of a Q-W pattern. Consequently, the ricin B lectin domain as also been refered as the (QxW)3 domain and the three homologous regions as the QxW repeats [, ]. A disulphide bond is also conserved in some of the QxW repeats []. The 3D structure of the ricin B chain has shown that the three QxW repeats pack around a pseudo threefold axis that is stabilised by the lambda linker []. The ricin B lectin domain has no major segments of a helix or beta sheet but each of the QxW repeats contains an omega loop []. An idealized omega-loop is a compact, contiguous segment of polypeptide that traces a 'loop-shaped' path in three-dimensional space; the main chain resembles a Greek omega.; PDB: 2VLC_B 3A22_B 3A21_B 3A23_B 1GGP_B 1VCL_A 2Z48_B 2Z49_A 2D7R_A 2D7I_A .... |
| >PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0031 Score=54.83 Aligned_cols=74 Identities=14% Similarity=0.136 Sum_probs=56.1
Q ss_pred ccceeeCCCCceeeeecCC----CCceecCCCCCC--CCccccCCc----ceeecccceEEeeccC----Cccceecccc
Q 008330 410 LHKVIYHPATGLCVQRKSF----LDPLTLGPCTES--EAWSYTPHK----TISLKGAYFCLQAKHV----GKPAKLGIIC 475 (570)
Q Consensus 410 ~~~~~~~~~tg~c~~~~~~----~~~~~~~~c~~~--~~W~~~~~~----~~~~~~~~~cl~a~~~----g~~~~~~~~c 475 (570)
.++.|....||+|+++.+. .+++.+++|.++ ++|...+.+ .|.-+.+++||+..+. |.++.+ +.|
T Consensus 15 g~Y~i~n~~sg~~L~v~~~~~~~g~~v~~~~~~~~~~Q~W~i~~~~~g~y~I~n~~s~~~Ldv~~~~~~~g~~v~~-~~~ 93 (105)
T PF14200_consen 15 GYYKIRNVNSGKYLDVAGGSTANGTNVQQWTCNGNDNQQWKIEPVGDGYYRIRNKNSGKVLDVAGGSTANGTNVQQ-WEY 93 (105)
T ss_dssp TEEEEEETTTTEEEEEGCTTCSTTEBEEEEESSSSGGGEEEEEESTTSEEEEEETSTTEEEEEGGGSSSTTEBEEE-EE-
T ss_pred CEEEEEECCCCCEEEeCCCCcCCCcEEEEecCCCCcCcEEEEEEecCCeEEEEECCCCcEEEECCCCCCCCCEEEE-EeC
Confidence 3577778899999999543 356999999764 799998555 4666789999999875 455555 777
Q ss_pred -C-CCCCceeE
Q 008330 476 -T-DCGSTWEI 484 (570)
Q Consensus 476 -~-~~~~~W~~ 484 (570)
. +++|+|++
T Consensus 94 ~~~~~~Q~W~l 104 (105)
T PF14200_consen 94 DNGSDNQQWKL 104 (105)
T ss_dssp STSSGGGEEEE
T ss_pred CCCCccCEEEe
Confidence 4 88999987
|
... |
| >PLN02361 alpha-amylase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.021 Score=61.73 Aligned_cols=91 Identities=19% Similarity=0.223 Sum_probs=63.8
Q ss_pred CCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCc
Q 008330 49 ENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGI 128 (570)
Q Consensus 49 ~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~ 128 (570)
..|.+|.|.|.||..+. +.|-+.+.+-++.|+++||++|=||=..+......|.. .-.
T Consensus 8 ~~~~~v~lQ~F~W~~~~------~~~w~~i~~kl~~l~~lG~t~iwl~P~~~~~~~~GY~~----------------~d~ 65 (401)
T PLN02361 8 RNGREILLQAFNWESHK------HDWWRNLEGKVPDLAKSGFTSAWLPPPSQSLAPEGYLP----------------QNL 65 (401)
T ss_pred cCCCcEEEEEEeccCCc------cHHHHHHHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCc----------------ccc
Confidence 46899999999997542 23446678889999999999999954433222211210 012
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEec---CC
Q 008330 129 QSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDN---HI 164 (570)
Q Consensus 129 ~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~---H~ 164 (570)
+..||.+-. .+.|+.+|++|.++||+||+|+ |.
T Consensus 66 y~~~~~~Gt---~~el~~li~~~h~~gi~vi~D~V~NH~ 101 (401)
T PLN02361 66 YSLNSAYGS---EHLLKSLLRKMKQYNVRAMADIVINHR 101 (401)
T ss_pred cccCcccCC---HHHHHHHHHHHHHcCCEEEEEEccccc
Confidence 445666543 4669999999999999999994 75
|
|
| >KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.033 Score=61.17 Aligned_cols=109 Identities=14% Similarity=0.074 Sum_probs=74.9
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+++-|+.++|..+.+. .+.. .-.++..++.+..+|+++.++||.
T Consensus 93 ykeDv~Lmk~lgv~afRFSIsWSRIlP~----G~~~--------------------~gVN~~Gi~fY~~LI~eL~~nGI~ 148 (524)
T KOG0626|consen 93 YKEDVKLMKELGVDAFRFSISWSRILPN----GRLT--------------------GGVNEAGIQFYNNLIDELLANGIE 148 (524)
T ss_pred hHHHHHHHHHcCCCeEEEEeehHhhCCC----CCcC--------------------CCcCHHHHHHHHHHHHHHHHcCCe
Confidence 5889999999999999999999776552 1110 113567899999999999999999
Q ss_pred EEEec-CCCCCCccccCCCC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDN-HISKPGWCCSNSDG-NGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~-H~~~~~w~~~~~dg-ng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.++.+ |.+-|.+.. |. .||-+.+ ..+.|.++=+-.=++|.+. |=-+=.+|||.
T Consensus 149 P~VTLfHwDlPq~Le---DeYgGwLn~~--ivedF~~yA~~CF~~fGDr--VK~WiT~NEP~ 203 (524)
T KOG0626|consen 149 PFVTLFHWDLPQALE---DEYGGWLNPE--IVEDFRDYADLCFQEFGDR--VKHWITFNEPN 203 (524)
T ss_pred EEEEEecCCCCHHHH---HHhccccCHH--HHHHHHHHHHHHHHHhccc--ceeeEEecccc
Confidence 99986 545454321 21 2444432 2455666555566677775 43455677776
|
|
| >PLN02784 alpha-amylase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.035 Score=64.48 Aligned_cols=94 Identities=20% Similarity=0.273 Sum_probs=66.4
Q ss_pred cCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccC
Q 008330 48 DENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGG 127 (570)
Q Consensus 48 d~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g 127 (570)
..+|..+.|+|.+|..+. .|.|.+.+.+-++.|+++||++|=||=.........|.. ..
T Consensus 498 ~~~~~eVmlQgF~Wds~~-----dg~w~~~I~ekldyL~~LG~taIWLpP~~~s~s~~GY~p----------------~D 556 (894)
T PLN02784 498 TGSGFEILCQGFNWESHK-----SGRWYMELGEKAAELSSLGFTVVWLPPPTESVSPEGYMP----------------KD 556 (894)
T ss_pred ccCCceEEEEeEEcCcCC-----CCchHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCcCc----------------cc
Confidence 457889999999997653 355667788889999999999999955433222211210 11
Q ss_pred cccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEe---cCCC
Q 008330 128 IQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILD---NHIS 165 (570)
Q Consensus 128 ~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD---~H~~ 165 (570)
.+..|+.+.. .+-|+.+|++|.++||+||+| +|..
T Consensus 557 ~y~lds~yGT---~~ELk~LI~a~H~~GIkVIlDiViNH~a 594 (894)
T PLN02784 557 LYNLNSRYGT---IDELKDLVKSFHEVGIKVLGDAVLNHRC 594 (894)
T ss_pred ccccCcCcCC---HHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 2445665543 456999999999999999999 4754
|
|
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.23 Score=57.12 Aligned_cols=68 Identities=24% Similarity=0.260 Sum_probs=45.1
Q ss_pred HHHHHHHHHcCCcEEEe-ccccccccc-CccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 79 DMLSKRVVDMGFNCVRL-TWPLYLATN-DSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRl-Pi~~~~~~~-~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+++.|+++|+|+|=| |+....... -.|. ....+..+|.+.. .+.|+++|++|.++||
T Consensus 174 ~~ll~yl~~LGv~~i~L~Pi~~~~~~~~~GY~----------------~~~y~~i~~~~Gt---~~d~k~lv~~~H~~Gi 234 (633)
T PRK12313 174 DELIPYVKEMGYTHVEFMPLMEHPLDGSWGYQ----------------LTGYFAPTSRYGT---PEDFMYLVDALHQNGI 234 (633)
T ss_pred HHHHHHHHHcCCCEEEeCchhcCCCCCCCCCC----------------CcCcCcCCCCCCC---HHHHHHHHHHHHHCCC
Confidence 34568999999999998 664321110 0111 0122455666543 4679999999999999
Q ss_pred EEEEe---cCCC
Q 008330 157 MVILD---NHIS 165 (570)
Q Consensus 157 ~VILD---~H~~ 165 (570)
.|||| +|..
T Consensus 235 ~VilD~V~nH~~ 246 (633)
T PRK12313 235 GVILDWVPGHFP 246 (633)
T ss_pred EEEEEECCCCCC
Confidence 99999 4654
|
|
| >KOG2230 consensus Predicted beta-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.064 Score=58.85 Aligned_cols=173 Identities=18% Similarity=0.226 Sum_probs=101.7
Q ss_pred CCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCc
Q 008330 49 ENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGI 128 (570)
Q Consensus 49 ~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~ 128 (570)
-+|.|+.|+|.||.-.. +..+.....-++-.++.+++.|+|++|+ |.- |+
T Consensus 332 in~~pvflkg~nwip~s--~f~dr~t~~~~~~LL~Sv~e~~MN~lRV-WGG---------------------------Gv 381 (867)
T KOG2230|consen 332 INDEPVFLKGTNWIPVS--MFRDRENIAKTEFLLDSVAEVGMNMLRV-WGG---------------------------GV 381 (867)
T ss_pred EcCcEEEeecCCccChH--HHHhhHHHHHHHHHHHHHHHhCcceEEE-ecC---------------------------cc
Confidence 37899999999996321 0000000011355688899999999998 221 22
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHH----HHHHHHHHHhCCC
Q 008330 129 QSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWI----KGLTKMATIFNGV 204 (570)
Q Consensus 129 ~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~----~~w~~iA~ryk~~ 204 (570)
|+ -|..-..|.+.||.|--|+-- .|+--. ..++|+ +-.++=|.|.+.+
T Consensus 382 YE-------------sd~FY~lad~lGilVWQD~MF-----ACAlYP----------t~~eFl~sv~eEV~yn~~Rls~H 433 (867)
T KOG2230|consen 382 YE-------------SDYFYQLADSLGILVWQDMMF-----ACALYP----------TNDEFLSSVREEVRYNAMRLSHH 433 (867)
T ss_pred cc-------------chhHHHHhhhccceehhhhHH-----Hhhccc----------CcHHHHHHHHHHHHHHHHhhccC
Confidence 22 134556788999999888653 243211 123333 3345668899999
Q ss_pred CcEEEEeccCCCCCCC-------------CChhHHHHHHHH-HHHHHHhcCCCcEEEEeCCCCCCcch---hhhhcccCc
Q 008330 205 RNVVGMSLRNELRGPK-------------QNVKDWYRYMQL-GAEAVHAANPEVLVILSGLNFDKDLS---FVRNQAVNL 267 (570)
Q Consensus 205 p~Vig~dL~NEP~~~~-------------~~~~~W~~~~~~-~~~aIr~~dp~~lIiVeG~~w~~dl~---~~~~~p~~l 267 (570)
|.|+.|.--||-...- ...++..-++++ +.+.....+|.++.|++.+.-|..-. ++..+|
T Consensus 434 pSviIfsgNNENEaAl~~nWy~~sf~~~~~~~kdyvlly~~~i~el~l~~~~srPfi~SSPsNG~ete~e~~VS~NP--- 510 (867)
T KOG2230|consen 434 PSVIIFSGNNENEAALVQNWYGTSFERDRFESKDYVLLYANVIHELKLVSHSSRPFIVSSPSNGKETEPENYVSSNP--- 510 (867)
T ss_pred CeEEEEeCCCccHHHHHhhhhcccccccchhhhhhhHHHHHHHHHHHhhcCCCCCceecCCCCCcccCccccccCCC---
Confidence 9999999999976531 012233334444 33334456777778887765443221 233333
Q ss_pred CCCCCEEEEEeecCCCC
Q 008330 268 TFTGKLVFEAHWYGFTD 284 (570)
Q Consensus 268 ~~~~nlVys~H~Y~~~~ 284 (570)
.+|--=++|+|....
T Consensus 511 --~dn~~GDVHfYdy~~ 525 (867)
T KOG2230|consen 511 --QDNQNGDVHFYDYTK 525 (867)
T ss_pred --ccccCCceEeeehhh
Confidence 234444899997543
|
|
| >COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.43 Score=49.99 Aligned_cols=187 Identities=18% Similarity=0.204 Sum_probs=97.1
Q ss_pred HhcCCCEEEEecCCCCCCccccCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCC-CcEEEEeccCCCCCCCC------
Q 008330 151 LGNNNVMVILDNHISKPGWCCSNSDGNGFFGD--QYFNPDLWIKGLTKMATIFNGV-RNVVGMSLRNELRGPKQ------ 221 (570)
Q Consensus 151 a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d--~~~~~~~~~~~w~~iA~ryk~~-p~Vig~dL~NEP~~~~~------ 221 (570)
+.++|+.|+-.-...+ .|-....+.++=-.. ++..-..|.+++......++++ -++.++.+-|||.....
T Consensus 111 ~in~g~ivfASPWspP-a~Mktt~~~ngg~~g~Lk~e~Ya~yA~~l~~fv~~m~~nGvnlyalSVQNEPd~~p~~d~~~w 189 (433)
T COG5520 111 AINPGMIVFASPWSPP-ASMKTTNNRNGGNAGRLKYEKYADYADYLNDFVLEMKNNGVNLYALSVQNEPDYAPTYDWCWW 189 (433)
T ss_pred hcCCCcEEEecCCCCc-hhhhhccCcCCccccccchhHhHHHHHHHHHHHHHHHhCCCceeEEeeccCCcccCCCCcccc
Confidence 7889999988755442 332111121210000 1111245666777777777765 46889999999976521
Q ss_pred ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCC-cch-hhhhcccCcCCCCCEEEEEeecCCCCC-CCCCCCCCcchhh
Q 008330 222 NVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDK-DLS-FVRNQAVNLTFTGKLVFEAHWYGFTDG-QAWVDGNPNQVCG 298 (570)
Q Consensus 222 ~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~-dl~-~~~~~p~~l~~~~nlVys~H~Y~~~~~-~~w~~~~~~~~~~ 298 (570)
+.++-.++|. +..++++.+.-|++....|+. +++ ++-++|-.+ ..-.++..|+|+-.++ |+..
T Consensus 190 tpQe~~rF~~---qyl~si~~~~rV~~pes~~~~~~~~dp~lnDp~a~--a~~~ilg~H~Ygg~v~~~p~~--------- 255 (433)
T COG5520 190 TPQEELRFMR---QYLASINAEMRVIIPESFKDLPNMSDPILNDPKAL--ANMDILGTHLYGGQVSDQPYP--------- 255 (433)
T ss_pred cHHHHHHHHH---HhhhhhccccEEecchhcccccccccccccCHhHh--cccceeEeeecccccccchhh---------
Confidence 2233334443 445556666667765444432 111 111222221 2346889999986654 1100
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHH---HCCC-ceEEeccCcee
Q 008330 299 RVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAA---ELDW-DWALWTLVGSY 361 (570)
Q Consensus 299 ~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~---~~gi-gw~~W~~~G~y 361 (570)
.+.+ .-.+.-||++|.-.+..+++-.+...+.-...... +-|. ++.+|.+..+|
T Consensus 256 --------lak~-~~~gKdlwmte~y~~esd~~s~dr~~~~~~~hi~~gm~~gg~~ayv~W~i~~~~ 313 (433)
T COG5520 256 --------LAKQ-KPAGKDLWMTECYPPESDPNSADREALHVALHIHIGMTEGGFQAYVWWNIRLDY 313 (433)
T ss_pred --------HhhC-CCcCCceEEeecccCCCCCCcchHHHHHHHHHHHhhccccCccEEEEEEEeecc
Confidence 0000 01467799999988877664334323333222222 2233 57788876444
|
|
| >PLN00196 alpha-amylase; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.056 Score=59.05 Aligned_cols=92 Identities=17% Similarity=0.206 Sum_probs=59.6
Q ss_pred CCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCccc
Q 008330 51 GHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQS 130 (570)
Q Consensus 51 G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~ 130 (570)
+..|.|.|.+|..+. ..|-|-+.+.+-++.|+++||++|=||=..+......|.. .-.+.
T Consensus 23 ~~~v~~Q~F~W~~~~----~~gg~~~~i~~kldyL~~LGvtaIWL~P~~~s~s~hGY~~----------------~D~y~ 82 (428)
T PLN00196 23 AGQVLFQGFNWESWK----QNGGWYNFLMGKVDDIAAAGITHVWLPPPSHSVSEQGYMP----------------GRLYD 82 (428)
T ss_pred CCCEEEEeeccCCCC----CCCcCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCc----------------cccCC
Confidence 345679999996543 2333445577889999999999999954333222111210 01133
Q ss_pred CCC-CCCCchHHHHHHHHHHHHhcCCCEEEEe---cCCC
Q 008330 131 NNP-SIVDLPLIKAFQAVVASLGNNNVMVILD---NHIS 165 (570)
Q Consensus 131 ~nP-~~~~~t~l~~ld~vV~~a~~~Gl~VILD---~H~~ 165 (570)
.+| .+-. .+.|+++|++|.++||+||+| +|..
T Consensus 83 ld~~~fGt---~~elk~Lv~~aH~~GIkVilDvV~NH~~ 118 (428)
T PLN00196 83 LDASKYGN---EAQLKSLIEAFHGKGVQVIADIVINHRT 118 (428)
T ss_pred CCcccCCC---HHHHHHHHHHHHHCCCEEEEEECccCcc
Confidence 443 3322 356999999999999999999 4654
|
|
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.39 Score=56.16 Aligned_cols=67 Identities=22% Similarity=0.187 Sum_probs=44.2
Q ss_pred HHHHHHHHcCCcEEEe-ccccccccc-CccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 80 MLSKRVVDMGFNCVRL-TWPLYLATN-DSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 80 ~~~~~i~~~GfN~VRl-Pi~~~~~~~-~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++.|+++|+|+|=| |+....... -.|. ....+..+|.+.. .+.|+++|++|.++||.
T Consensus 270 ~l~~ylk~LGv~~i~L~Pi~e~~~~~~~GY~----------------~~~y~ai~~~~Gt---~~dfk~lV~~~H~~Gi~ 330 (726)
T PRK05402 270 QLIPYVKEMGFTHVELLPIAEHPFDGSWGYQ----------------PTGYYAPTSRFGT---PDDFRYFVDACHQAGIG 330 (726)
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCCCC----------------cccCCCcCcccCC---HHHHHHHHHHHHHCCCE
Confidence 4468889999999998 664321110 0011 0122345666543 56799999999999999
Q ss_pred EEEec---CCC
Q 008330 158 VILDN---HIS 165 (570)
Q Consensus 158 VILD~---H~~ 165 (570)
||||+ |..
T Consensus 331 VilD~V~NH~~ 341 (726)
T PRK05402 331 VILDWVPAHFP 341 (726)
T ss_pred EEEEECCCCCC
Confidence 99994 654
|
|
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.42 Score=54.75 Aligned_cols=68 Identities=21% Similarity=0.210 Sum_probs=45.0
Q ss_pred HHHHHHHHHcCCcEEEe-ccccccccc-CccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 79 DMLSKRVVDMGFNCVRL-TWPLYLATN-DSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRl-Pi~~~~~~~-~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+++.|+++|+|+|=| |+....... -.|. ....+..+|.+.. .+.|+++|++|.++||
T Consensus 160 ~~l~dyl~~LGvt~i~L~Pi~e~~~~~~wGY~----------------~~~y~~~~~~~Gt---~~dlk~lV~~~H~~Gi 220 (613)
T TIGR01515 160 DQLIPYVKELGFTHIELLPVAEHPFDGSWGYQ----------------VTGYYAPTSRFGT---PDDFMYFVDACHQAGI 220 (613)
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCCC----------------cccCcccccccCC---HHHHHHHHHHHHHCCC
Confidence 34458889999999999 775421110 0111 0122344555543 4679999999999999
Q ss_pred EEEEec---CCC
Q 008330 157 MVILDN---HIS 165 (570)
Q Consensus 157 ~VILD~---H~~ 165 (570)
+||||+ |..
T Consensus 221 ~VilD~V~NH~~ 232 (613)
T TIGR01515 221 GVILDWVPGHFP 232 (613)
T ss_pred EEEEEecccCcC
Confidence 999994 654
|
A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here. |
| >KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.25 Score=55.60 Aligned_cols=142 Identities=16% Similarity=0.196 Sum_probs=84.4
Q ss_pred CCCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhh
Q 008330 36 GLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQS 115 (570)
Q Consensus 36 ~~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s 115 (570)
+..+..+++.++ .+|+|+.+-.....-... + ....++.++++++.|+|+|-..+.|.+.++.
T Consensus 17 ~~~v~yd~~~~~-idG~r~~~isGsIHY~R~---~----pe~W~~~i~k~k~~Gln~IqtYVfWn~Hep~---------- 78 (649)
T KOG0496|consen 17 SFNVTYDKRSLL-IDGQRFILISGSIHYPRS---T----PEMWPDLIKKAKAGGLNVIQTYVFWNLHEPS---------- 78 (649)
T ss_pred eeEEecccccee-ecCCeeEEEEeccccccC---C----hhhhHHHHHHHHhcCCceeeeeeecccccCC----------
Confidence 456777777766 478888876554322211 1 1235788999999999999998888765541
Q ss_pred hhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCC--CCCCCC-----------C
Q 008330 116 FQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSD--GNGFFG-----------D 182 (570)
Q Consensus 116 ~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~d--gng~~~-----------d 182 (570)
+|.+ +-+..--+.+.|..+.+.|+||||-.- | +-|+.-+ |-.||- |
T Consensus 79 ----------~g~y-------~FsG~~DlvkFikl~~~~GLyv~LRiG---P-yIcaEw~~GG~P~wL~~~pg~~~Rt~n 137 (649)
T KOG0496|consen 79 ----------PGKY-------DFSGRYDLVKFIKLIHKAGLYVILRIG---P-YICAEWNFGGLPWWLRNVPGIVFRTDN 137 (649)
T ss_pred ----------CCcc-------cccchhHHHHHHHHHHHCCeEEEecCC---C-eEEecccCCCcchhhhhCCceEEecCC
Confidence 1111 111122256779999999999999643 1 2222111 113441 1
Q ss_pred CCCCHHHHHHHHHHHHHH----hCCC-CcEEEEeccCCCC
Q 008330 183 QYFNPDLWIKGLTKMATI----FNGV-RNVVGMSLRNELR 217 (570)
Q Consensus 183 ~~~~~~~~~~~w~~iA~r----yk~~-p~Vig~dL~NEP~ 217 (570)
+.| ..++.++|++|..+ |... --||...+=||=.
T Consensus 138 epf-k~~~~~~~~~iv~~mk~L~~~qGGPIIl~QIENEYG 176 (649)
T KOG0496|consen 138 EPF-KAEMERWTTKIVPMMKKLFASQGGPIILVQIENEYG 176 (649)
T ss_pred hHH-HHHHHHHHHHHHHHHHHHHhhcCCCEEEEEeechhh
Confidence 111 34556667777764 3322 3377789999863
|
|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.62 Score=54.05 Aligned_cols=66 Identities=21% Similarity=0.191 Sum_probs=44.6
Q ss_pred HHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 79 DMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
++.++.|+++|+|+|=| |+....... ++ |.. ..+.+..+|.+.. .+.|+++|++|.++||.
T Consensus 273 ~~ll~ylk~LGvt~I~LmPi~e~~~~~-~w------------GY~--~~~~~a~~~~~G~---~~dfk~lV~~~H~~Gi~ 334 (730)
T PRK12568 273 EQLIPYVQQLGFTHIELLPITEHPFGG-SW------------GYQ--PLGLYAPTARHGS---PDGFAQFVDACHRAGIG 334 (730)
T ss_pred HHHHHHHHHcCCCEEEECccccCCCCC-CC------------CCC--CCcCCccCcccCC---HHHHHHHHHHHHHCCCE
Confidence 45678999999999998 664321111 00 000 0133555666543 47799999999999999
Q ss_pred EEEec
Q 008330 158 VILDN 162 (570)
Q Consensus 158 VILD~ 162 (570)
||||+
T Consensus 335 VIlD~ 339 (730)
T PRK12568 335 VILDW 339 (730)
T ss_pred EEEEe
Confidence 99994
|
|
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=94.34 E-value=1.2 Score=51.38 Aligned_cols=66 Identities=24% Similarity=0.233 Sum_probs=42.5
Q ss_pred HHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 79 DMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
+.+++.|++||+|+|-| |+....... ++ |.. ..+.+..+|.+.. .+.|+++|++|-++||.
T Consensus 171 ~~l~~ylk~lG~t~velmPv~e~~~~~-~w------------GY~--~~~~~~~~~~~g~---~~~~~~lv~~~H~~gi~ 232 (639)
T PRK14706 171 HRLGEYVTYMGYTHVELLGVMEHPFDG-SW------------GYQ--VTGYYAPTSRLGT---PEDFKYLVNHLHGLGIG 232 (639)
T ss_pred HHHHHHHHHcCCCEEEccchhcCCCCC-CC------------CcC--cccccccccccCC---HHHHHHHHHHHHHCCCE
Confidence 34567899999999998 554321111 01 000 0122444555532 57799999999999999
Q ss_pred EEEec
Q 008330 158 VILDN 162 (570)
Q Consensus 158 VILD~ 162 (570)
||||+
T Consensus 233 VilD~ 237 (639)
T PRK14706 233 VILDW 237 (639)
T ss_pred EEEEe
Confidence 99994
|
|
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.84 Score=55.82 Aligned_cols=70 Identities=23% Similarity=0.222 Sum_probs=46.5
Q ss_pred HHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 79 DMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
++.++.|++||||+|=| |+..+.... ++ |.. ..+.+..+|.+-. .+-|+++|++|.++||.
T Consensus 769 ~~lldYlk~LGvt~IeLmPv~e~p~~~-sw------------GY~--~~~y~ap~~ryGt---~~dfk~lVd~~H~~GI~ 830 (1224)
T PRK14705 769 KELVDYVKWLGFTHVEFMPVAEHPFGG-SW------------GYQ--VTSYFAPTSRFGH---PDEFRFLVDSLHQAGIG 830 (1224)
T ss_pred HHHHHHHHHhCCCEEEECccccCCCCC-CC------------CCC--ccccCCcCcccCC---HHHHHHHHHHHHHCCCE
Confidence 45679999999999988 764332211 01 000 1123455666543 56799999999999999
Q ss_pred EEEec---CCCC
Q 008330 158 VILDN---HISK 166 (570)
Q Consensus 158 VILD~---H~~~ 166 (570)
||||+ |...
T Consensus 831 VILD~V~nH~~~ 842 (1224)
T PRK14705 831 VLLDWVPAHFPK 842 (1224)
T ss_pred EEEEeccccCCc
Confidence 99994 6543
|
|
| >smart00642 Aamy Alpha-amylase domain | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.15 Score=48.39 Aligned_cols=67 Identities=15% Similarity=0.164 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHcCCcEEEe-ccccccc---ccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHh
Q 008330 77 PMDMLSKRVVDMGFNCVRL-TWPLYLA---TNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLG 152 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRl-Pi~~~~~---~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~ 152 (570)
.+.+-++.|+++|||+|-| |+..... ....|.. ...+..+|.+- -.+.++++|++|.
T Consensus 20 gi~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~----------------~d~~~i~~~~G---t~~d~~~lv~~~h 80 (166)
T smart00642 20 GIIEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDI----------------SDYKQIDPRFG---TMEDFKELVDAAH 80 (166)
T ss_pred HHHHHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCc----------------cccCCCCcccC---CHHHHHHHHHHHH
Confidence 4556677899999999999 4322111 0001110 01123455543 2578999999999
Q ss_pred cCCCEEEEec
Q 008330 153 NNNVMVILDN 162 (570)
Q Consensus 153 ~~Gl~VILD~ 162 (570)
++||+||+|+
T Consensus 81 ~~Gi~vilD~ 90 (166)
T smart00642 81 ARGIKVILDV 90 (166)
T ss_pred HCCCEEEEEE
Confidence 9999999995
|
|
| >PLN02447 1,4-alpha-glucan-branching enzyme | Back alignment and domain information |
|---|
Probab=94.06 E-value=1.5 Score=51.16 Aligned_cols=66 Identities=15% Similarity=0.200 Sum_probs=42.2
Q ss_pred HHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 79 DMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
++.++.|+++|+|+|=| |+....... ++ |.. ....+..+|.+.. .+.|+++|++|.++||.
T Consensus 254 ~~~L~ylk~LG~t~I~LmPi~e~~~~~-~w------------GY~--~~~~fa~~~~~Gt---p~dlk~LVd~aH~~GI~ 315 (758)
T PLN02447 254 DDVLPRIKALGYNAVQLMAIQEHAYYG-SF------------GYH--VTNFFAVSSRSGT---PEDLKYLIDKAHSLGLR 315 (758)
T ss_pred HHHHHHHHHcCCCEEEECCccccCCCC-CC------------CcC--cccCcccccccCC---HHHHHHHHHHHHHCCCE
Confidence 56789999999999998 553221100 00 000 0112333444432 46799999999999999
Q ss_pred EEEec
Q 008330 158 VILDN 162 (570)
Q Consensus 158 VILD~ 162 (570)
||||+
T Consensus 316 VilDv 320 (758)
T PLN02447 316 VLMDV 320 (758)
T ss_pred EEEEe
Confidence 99994
|
|
| >PRK10785 maltodextrin glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=93.82 E-value=1.4 Score=50.36 Aligned_cols=68 Identities=10% Similarity=0.122 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|=| |+... -.+..|. + .-.+..+|.+.+ .+.|+++|++|.++||
T Consensus 181 I~~kLdYL~~LGv~~I~L~Pif~s-~s~hgYd---~-------------~Dy~~iDp~~Gt---~~df~~Lv~~aH~rGi 240 (598)
T PRK10785 181 ISEKLPYLKKLGVTALYLNPIFTA-PSVHKYD---T-------------EDYRHVDPQLGG---DAALLRLRHATQQRGM 240 (598)
T ss_pred HHHHHHHHHHcCCCEEEeCCcccC-CCCCCcC---c-------------ccccccCcccCC---HHHHHHHHHHHHHCCC
Confidence 456678899999999999 55321 0111111 0 012345777653 4679999999999999
Q ss_pred EEEEec---CCC
Q 008330 157 MVILDN---HIS 165 (570)
Q Consensus 157 ~VILD~---H~~ 165 (570)
+||||+ |..
T Consensus 241 kVilD~V~NH~~ 252 (598)
T PRK10785 241 RLVLDGVFNHTG 252 (598)
T ss_pred EEEEEECCCcCC
Confidence 999994 654
|
|
| >PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=93.78 E-value=3.6 Score=45.89 Aligned_cols=195 Identities=15% Similarity=0.194 Sum_probs=97.0
Q ss_pred HHHHHHHHHHhcCCCEEEEecCCCCCCccccCCC--CCCCCCCCCCC--HHHHHHHHHHHHHHhCCC-CcEEEEeccCCC
Q 008330 142 KAFQAVVASLGNNNVMVILDNHISKPGWCCSNSD--GNGFFGDQYFN--PDLWIKGLTKMATIFNGV-RNVVGMSLRNEL 216 (570)
Q Consensus 142 ~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~d--gng~~~d~~~~--~~~~~~~w~~iA~ryk~~-p~Vig~dL~NEP 216 (570)
..++++++.- .+|+++..-... |.|-..+.+ +.+.......+ .+.|.+++.+..+.|+.+ =.|.++-+-|||
T Consensus 157 p~ik~a~~~~--~~lki~aSpWSp-P~WMKtn~~~~g~g~l~g~~~~~y~~~yA~Y~vkfi~aY~~~GI~i~aiT~QNEP 233 (496)
T PF02055_consen 157 PLIKEALAIN--PNLKIFASPWSP-PAWMKTNGSMNGGGSLKGSLGDEYYQAYADYFVKFIQAYKKEGIPIWAITPQNEP 233 (496)
T ss_dssp HHHHHHHHHH--TT-EEEEEES----GGGBTTSSSCSS-BBSCGTTSHHHHHHHHHHHHHHHHHHCTT--ESEEESSSSC
T ss_pred HHHHHHHHhC--CCcEEEEecCCC-CHHHccCCcCcCCCccCCCCCchhHHHHHHHHHHHHHHHHHCCCCeEEEeccCCC
Confidence 3444444332 348888887765 567543222 22322211011 367888888888999865 358899999999
Q ss_pred CCC------CC----ChhHHHHHHHH-HHHHHHhcCC--CcEEEEeCCCCCCcchh---hhhcccCcCCCCCEEEEEeec
Q 008330 217 RGP------KQ----NVKDWYRYMQL-GAEAVHAANP--EVLVILSGLNFDKDLSF---VRNQAVNLTFTGKLVFEAHWY 280 (570)
Q Consensus 217 ~~~------~~----~~~~W~~~~~~-~~~aIr~~dp--~~lIiVeG~~w~~dl~~---~~~~p~~l~~~~nlVys~H~Y 280 (570)
... .+ +.++-..++.. +.-++++.++ +.-|++-..++...-.. +-..|-. ..---...+|+|
T Consensus 234 ~~~~~~~~~~~s~~~t~~~~~~Fi~~~LgP~l~~~~~g~d~kI~~~D~n~~~~~~~~~~il~d~~A--~~yv~GiA~HwY 311 (496)
T PF02055_consen 234 DNGSDPNYPWPSMGWTPEEQADFIKNYLGPALRKAGLGKDVKILIYDHNRDNLPDYADTILNDPEA--AKYVDGIAFHWY 311 (496)
T ss_dssp CGGGSTT-SSC--B--HHHHHHHHHHTHHHHHHTSTT-TTSEEEEEEEEGGGTTHHHHHHHTSHHH--HTTEEEEEEEET
T ss_pred CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEEEecCCcccchhhhhhhcChhh--HhheeEEEEECC
Confidence 742 11 22333344433 6778888877 65554422222211111 1111100 001246799999
Q ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC-------cc-hHHHHHHHHHHHHHCCCce
Q 008330 281 GFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN-------VN-DNRYLNCFFGVAAELDWDW 352 (570)
Q Consensus 281 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~-------~~-~~~~~~~~~~~~~~~gigw 352 (570)
..... ...+. ...+ .| -+..++.+|-.......+ .. ..+|...++..+..---+|
T Consensus 312 ~g~~~-----------~~~l~-~~h~--~~---P~k~l~~TE~~~g~~~~~~~~~~g~w~~~~~y~~~ii~~lnn~~~gw 374 (496)
T PF02055_consen 312 GGDPS-----------PQALD-QVHN--KF---PDKFLLFTEACCGSWNWDTSVDLGSWDRAERYAHDIIGDLNNWVSGW 374 (496)
T ss_dssp TCS-H-----------CHHHH-HHHH--HS---TTSEEEEEEEESS-STTS-SS-TTHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred CCCch-----------hhHHH-HHHH--HC---CCcEEEeeccccCCCCcccccccccHHHHHHHHHHHHHHHHhhceee
Confidence 85321 01111 1111 10 235599999765432211 11 1356677777776544589
Q ss_pred EEeccC
Q 008330 353 ALWTLV 358 (570)
Q Consensus 353 ~~W~~~ 358 (570)
+.|.+-
T Consensus 375 ~~WNl~ 380 (496)
T PF02055_consen 375 IDWNLA 380 (496)
T ss_dssp EEEESE
T ss_pred eeeeee
Confidence 999863
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A .... |
| >KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.1 Score=58.48 Aligned_cols=102 Identities=23% Similarity=0.510 Sum_probs=72.8
Q ss_pred CCCceeeeecCC----CCceecCCCCCC---CCccccCCcceeecccceEEeeccCCccceeccccC-CCCCceeEeecc
Q 008330 417 PATGLCVQRKSF----LDPLTLGPCTES---EAWSYTPHKTISLKGAYFCLQAKHVGKPAKLGIICT-DCGSTWEIISDS 488 (570)
Q Consensus 417 ~~tg~c~~~~~~----~~~~~~~~c~~~---~~W~~~~~~~~~~~~~~~cl~a~~~g~~~~~~~~c~-~~~~~W~~~s~~ 488 (570)
..++.|.+.... +.++.+.+|.+. |-|.||.+++|.. +.+|++.-..|. +.+ .+|. ..+|.|..-.++
T Consensus 461 ~~~~~cld~~~~~~~~~~~~~~~~Ch~~~~~Q~~~yT~~~eir~--~~~cl~~~~~~~-v~l-~~C~~~~~q~w~~~~~~ 536 (578)
T KOG3736|consen 461 GNPNLCLDTERAPAGQGMAVGLYPCHGPGGNQYFPYTKQGEIRI--GDLCLDVDDAGK-VTL-YDCHKMGNQLWHYDKDG 536 (578)
T ss_pred CCcchhhhhhchhccCCCcceEecCCCccccccccccCCcceEE--CCEEeccccCCc-eEE-EecccccccceEEcCCC
Confidence 778999998441 245889999883 7999999999886 349998765555 666 8996 338999997774
Q ss_pred ccEEEEecCCCceEEEeecCCCc-eeecceeeeCCCCCCCccCceE
Q 008330 489 KMHLSSKADNGTTVCLDVDSSNT-IVTNTCKCLSRDKTCDPASQWF 533 (570)
Q Consensus 489 ~~~~~~~~~~~~~~cld~~~~~~-~~~~~c~c~~~~~~~~~~~~~~ 533 (570)
.+ -..+++.||+...... ++-..|.|- +|..||.
T Consensus 537 ~i-----~~~~sg~CL~~~~~~~~~~l~~c~~~------~~~Q~W~ 571 (578)
T KOG3736|consen 537 TL-----YHRNSGKCLEAAVDKNGLILVACDPS------DPTQQWL 571 (578)
T ss_pred ce-----EcCCCCccccccCCCCCceEeecCCC------CCcceEE
Confidence 32 2346789999985332 444666653 4567884
|
|
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
Probab=93.54 E-value=1.4 Score=50.51 Aligned_cols=154 Identities=19% Similarity=0.289 Sum_probs=75.2
Q ss_pred HHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchh----hccCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 80 MLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLE----AIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 80 ~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~----~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
+.++.|+++|+|+|=| |+....-.++ ..+ ..+. ..|... .+.+-+..+|... ....+.|+++|++|.++
T Consensus 168 ~~LdyL~~LGvt~I~L~Pi~~~~~~~~---~~~-~~~~-~wGY~~~~y~~~~~~y~~~p~~~-~~~~~efk~lV~~~H~~ 241 (605)
T TIGR02104 168 TGLDYLKELGVTHVQLLPVFDFAGVDE---EDP-NNAY-NWGYDPLNYNVPEGSYSTNPYDP-ATRIRELKQMIQALHEN 241 (605)
T ss_pred hHHHHHHHcCCCEEEeCCccccccccc---ccC-CCCC-CCCCCCccCCCcChhhhcCCCcc-chHHHHHHHHHHHHHHC
Confidence 4589999999999999 6642110000 000 0000 000000 0001122334321 22357899999999999
Q ss_pred CCEEEEe---cCCCC----------CCcccc-CCCC-----CCCCCCCCCCHHHHHHHH----HHHHHHhCCCCcEEEEe
Q 008330 155 NVMVILD---NHISK----------PGWCCS-NSDG-----NGFFGDQYFNPDLWIKGL----TKMATIFNGVRNVVGMS 211 (570)
Q Consensus 155 Gl~VILD---~H~~~----------~~w~~~-~~dg-----ng~~~d~~~~~~~~~~~w----~~iA~ryk~~p~Vig~d 211 (570)
||.|||| +|... |.|... ..++ .++.++-........++. +.-+++| +-...- +|
T Consensus 242 Gi~VilDvV~NH~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~v~~~i~~~~~~W~~e~-~iDGfR-~D 319 (605)
T TIGR02104 242 GIRVIMDVVYNHTYSREESPFEKTVPGYYYRYNEDGTLSNGTGVGNDTASEREMMRKFIVDSVLYWVKEY-NIDGFR-FD 319 (605)
T ss_pred CCEEEEEEEcCCccCCCCCcccCCCCCeeEEECCCCCccCCCcccCCcccCCHHHHHHHHHHHHHHHHHc-CCCEEE-Ee
Confidence 9999999 47642 111100 0000 011111111112222333 3333334 233443 67
Q ss_pred ccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 212 LRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 212 L~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
++... +.. .++++.++|++++|+..++-|+
T Consensus 320 ~~~~~-----~~~----~~~~~~~~~~~~~p~~~ligE~ 349 (605)
T TIGR02104 320 LMGIH-----DIE----TMNEIRKALNKIDPNILLYGEG 349 (605)
T ss_pred chhcC-----CHH----HHHHHHHHHHhhCCCeEEEEcc
Confidence 77443 122 2356677888999999888886
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases. |
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
Probab=93.40 E-value=1.2 Score=40.65 Aligned_cols=107 Identities=11% Similarity=0.275 Sum_probs=66.0
Q ss_pred HHHHHHHHHHcCCcEEEecccc-cccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPL-YLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~-~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
.++.++.+++.|.|+|-+.-.- ..+. -|+. .+...+|.+. .+.|.++|++|.++||
T Consensus 2 ~~~~~~~lk~~~v~si~i~a~~h~g~a--yYPt-----------------~~~~~hp~L~----~Dllge~v~a~h~~Gi 58 (132)
T PF14871_consen 2 PEQFVDTLKEAHVNSITIFAKCHGGYA--YYPT-----------------KVGPRHPGLK----RDLLGEQVEACHERGI 58 (132)
T ss_pred HHHHHHHHHHhCCCEEEEEcccccEEE--EccC-----------------CCCcCCCCCC----cCHHHHHHHHHHHCCC
Confidence 4678999999999999994431 1110 0211 1123466653 3679999999999999
Q ss_pred EEEE--ecCCC------CCCccccCCCCC----------CCC----CCCCCCHHHHHHHHHHHHHHhCCCCcEEEEe
Q 008330 157 MVIL--DNHIS------KPGWCCSNSDGN----------GFF----GDQYFNPDLWIKGLTKMATIFNGVRNVVGMS 211 (570)
Q Consensus 157 ~VIL--D~H~~------~~~w~~~~~dgn----------g~~----~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~d 211 (570)
.|++ |.+.. .|.|++-..+|. +|+ ++.| .+..++..+.|.++| +-..|. +|
T Consensus 59 rv~ay~~~~~d~~~~~~HPeW~~~~~~G~~~~~~~~~~~~~~~~c~ns~Y--~e~~~~~i~Ei~~~y-~~DGiF-~D 131 (132)
T PF14871_consen 59 RVPAYFDFSWDEDAAERHPEWFVRDADGRPMRGERFGYPGWYTCCLNSPY--REFLLEQIREILDRY-DVDGIF-FD 131 (132)
T ss_pred EEEEEEeeecChHHHHhCCceeeECCCCCCcCCCCcCCCCceecCCCccH--HHHHHHHHHHHHHcC-CCCEEE-ec
Confidence 9984 55533 278876444443 111 1111 355667778888888 444554 44
|
|
| >PRK09441 cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.34 Score=53.84 Aligned_cols=100 Identities=14% Similarity=0.172 Sum_probs=58.6
Q ss_pred CCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEeccccccccc---CccccchhhhhhhhccchhhccC
Q 008330 51 GHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATN---DSLASLTVRQSFQKLGLLEAIGG 127 (570)
Q Consensus 51 G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~---~~~~n~tv~~s~~~lg~~~~~~g 127 (570)
+..|.|+|.+|... ..|-+-+.+.+-++.|+++|||+|=|+=....... ..|.. . .+-.++ + +..
T Consensus 2 ~~~~~~q~f~w~~~-----~~~~~~~~I~~kldyl~~LGvtaIwl~P~~~~~~~~~~hgY~~---~-D~~~~~--~-~~~ 69 (479)
T PRK09441 2 RNGTMMQYFEWYLP-----NDGKLWNRLAERAPELAEAGITAVWLPPAYKGTSGGYDVGYGV---Y-DLFDLG--E-FDQ 69 (479)
T ss_pred CCceEEEEEEeccC-----CCccHHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCCe---e-cccccc--c-ccc
Confidence 34588999999632 33444455677789999999999999322221110 01110 0 000000 0 000
Q ss_pred cccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEe---cCCC
Q 008330 128 IQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILD---NHIS 165 (570)
Q Consensus 128 ~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD---~H~~ 165 (570)
....+|.+-. .+.|+++|++|.++||+||+| +|..
T Consensus 70 ~~~id~~fGt---~~dl~~Li~~~H~~Gi~vi~D~V~NH~~ 107 (479)
T PRK09441 70 KGTVRTKYGT---KEELLNAIDALHENGIKVYADVVLNHKA 107 (479)
T ss_pred cCCcCcCcCC---HHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 0023555543 456999999999999999999 5765
|
|
| >PLN02960 alpha-amylase | Back alignment and domain information |
|---|
Probab=93.16 E-value=3.5 Score=48.64 Aligned_cols=70 Identities=16% Similarity=0.188 Sum_probs=44.8
Q ss_pred HHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 79 DMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
++.++.|+++|+|+|=| |+..... . .+ .|.. ....+..+|.+.. .+.|+++|++|-++||.
T Consensus 420 e~~LdYLk~LGvt~IeLmPv~e~~~-~---~s---------wGY~--~~~yfa~~~~yGt---p~dfk~LVd~aH~~GI~ 481 (897)
T PLN02960 420 QKVLPHVKKAGYNAIQLIGVQEHKD-Y---SS---------VGYK--VTNFFAVSSRFGT---PDDFKRLVDEAHGLGLL 481 (897)
T ss_pred HHHHHHHHHcCCCEEEECCcccCCC-C---CC---------CCCC--cccCCCcccccCC---HHHHHHHHHHHHHCCCE
Confidence 45689999999999999 5532110 0 00 0100 0122344555433 47799999999999999
Q ss_pred EEEec---CCCC
Q 008330 158 VILDN---HISK 166 (570)
Q Consensus 158 VILD~---H~~~ 166 (570)
||||+ |...
T Consensus 482 VILDvV~NH~~~ 493 (897)
T PLN02960 482 VFLDIVHSYAAA 493 (897)
T ss_pred EEEEecccccCC
Confidence 99994 6543
|
|
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
Probab=93.09 E-value=1.8 Score=48.82 Aligned_cols=146 Identities=16% Similarity=0.143 Sum_probs=75.6
Q ss_pred HHHHHHHHHHcCCcEEEe-ccccccc-ccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLA-TNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~-~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
+.+-++.|+++|+|+|-| |+....- .+-.|.. ...+..+|.+.. .+.|+++|++|.++|
T Consensus 113 i~~~l~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~----------------~~~~~~~~~~G~---~~e~k~lV~~aH~~G 173 (542)
T TIGR02402 113 AIEKLPYLADLGITAIELMPVAQFPGTRGWGYDG----------------VLPYAPHNAYGG---PDDLKALVDAAHGLG 173 (542)
T ss_pred HHHhhHHHHHcCCCEEEeCccccCCCCCCCCCCc----------------cCccccccccCC---HHHHHHHHHHHHHCC
Confidence 345578999999999999 5532110 0001110 011334555433 567999999999999
Q ss_pred CEEEEe---cCCCCCC--------ccccCCCCCCCCCCC-CCC-H--HHHHHHHHHHHHHhCC---CCcEEEEeccCCCC
Q 008330 156 VMVILD---NHISKPG--------WCCSNSDGNGFFGDQ-YFN-P--DLWIKGLTKMATIFNG---VRNVVGMSLRNELR 217 (570)
Q Consensus 156 l~VILD---~H~~~~~--------w~~~~~dgng~~~d~-~~~-~--~~~~~~w~~iA~ryk~---~p~Vig~dL~NEP~ 217 (570)
|.|||| +|....+ |... +...+|++. .++ + +...++....+...-. -...- +|+...-.
T Consensus 174 i~VilD~V~NH~~~~~~~~~~~~~y~~~--~~~~~wg~~~n~~~~~~~~vr~~i~~~~~~W~~e~~iDGfR-~D~~~~~~ 250 (542)
T TIGR02402 174 LGVILDVVYNHFGPEGNYLPRYAPYFTD--RYSTPWGAAINFDGPGSDEVRRYILDNALYWLREYHFDGLR-LDAVHAIA 250 (542)
T ss_pred CEEEEEEccCCCCCccccccccCccccC--CCCCCCCCccccCCCcHHHHHHHHHHHHHHHHHHhCCcEEE-EeCHHHhc
Confidence 999999 4653211 1100 111233322 111 1 1222333333333321 22332 56554432
Q ss_pred CCCCChhHHHHHHHHHHHHHHhcCCC---cEEEEeC
Q 008330 218 GPKQNVKDWYRYMQLGAEAVHAANPE---VLVILSG 250 (570)
Q Consensus 218 ~~~~~~~~W~~~~~~~~~aIr~~dp~---~lIiVeG 250 (570)
.. . -..+++++.+++++++|+ .++|-|.
T Consensus 251 ~~--~---~~~~l~~~~~~~~~~~p~~~~~~li~E~ 281 (542)
T TIGR02402 251 DT--S---AKHILEELAREVHELAAELRPVHLIAES 281 (542)
T ss_pred cc--c---HHHHHHHHHHHHHHHCCCCceEEEEEec
Confidence 11 1 123456677888999888 6666675
|
Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system. |
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.16 Score=51.71 Aligned_cols=66 Identities=17% Similarity=0.169 Sum_probs=43.0
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|||+|-| |+...--....|. + ...+..+|.+- -.+.|+++|++|.++||
T Consensus 6 i~~kLdyl~~lGv~~I~l~Pi~~~~~~~~gY~---~-------------~d~~~vd~~~G---t~~d~~~Lv~~~h~~gi 66 (316)
T PF00128_consen 6 IIDKLDYLKDLGVNAIWLSPIFESPNGYHGYD---P-------------SDYYAVDPRFG---TMEDFKELVDAAHKRGI 66 (316)
T ss_dssp HHHTHHHHHHHTESEEEESS-EESSSSTTTTS---E-------------SEEEEESTTTB---HHHHHHHHHHHHHHTTC
T ss_pred HHHhhHHHHHcCCCceeccccccccccccccc---c-------------eeeeccccccc---hhhhhhhhhhccccccc
Confidence 445578999999999999 3422100000111 0 01134567664 35789999999999999
Q ss_pred EEEEec
Q 008330 157 MVILDN 162 (570)
Q Consensus 157 ~VILD~ 162 (570)
+||||+
T Consensus 67 ~VilD~ 72 (316)
T PF00128_consen 67 KVILDV 72 (316)
T ss_dssp EEEEEE
T ss_pred eEEEee
Confidence 999995
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A .... |
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
Probab=92.95 E-value=14 Score=38.87 Aligned_cols=254 Identities=16% Similarity=0.219 Sum_probs=125.4
Q ss_pred hHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 77 PMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
.++++++.|++.|+|+|=|.+-.+ ++..+-+... +.. ..+....+ ...-++++|+.+.++||
T Consensus 14 ~~~~~~~~i~~t~lNavVIDvKdd------~G~i~y~s~~-----~~~-~~~ga~~~------~i~D~~~l~~~l~e~gI 75 (316)
T PF13200_consen 14 RLDKLLDLIKRTELNAVVIDVKDD------DGNITYDSQV-----PLA-REIGAVKP------YIKDLKALVKKLKEHGI 75 (316)
T ss_pred HHHHHHHHHHhcCCceEEEEEecC------CceEEecCCC-----chh-hhcccccc------cccCHHHHHHHHHHCCC
Confidence 478999999999999999977432 1111110000 000 00001111 12338899999999999
Q ss_pred EEEEecCCC--------CCCccccCCCCCCC-------CCCCCCCHHHHHHHHHHHHHHhC--CCCcEEEEeccCCCCCC
Q 008330 157 MVILDNHIS--------KPGWCCSNSDGNGF-------FGDQYFNPDLWIKGLTKMATIFN--GVRNVVGMSLRNELRGP 219 (570)
Q Consensus 157 ~VILD~H~~--------~~~w~~~~~dgng~-------~~d~~~~~~~~~~~w~~iA~ryk--~~p~Vig~dL~NEP~~~ 219 (570)
|+|-=+... .|.|.-...+|..| |-|+ ++++.|. +.-.||++-. +...|- ||=+==|.+.
T Consensus 76 Y~IARIv~FkD~~la~~~pe~av~~~~G~~w~d~~~~~WvnP-~~~evw~-Y~i~IA~Eaa~~GFdEIq-fDYIRFP~~~ 152 (316)
T PF13200_consen 76 YPIARIVVFKDPVLAEAHPEWAVKTKDGSVWRDNEGEAWVNP-YSKEVWD-YNIDIAKEAAKLGFDEIQ-FDYIRFPDEG 152 (316)
T ss_pred EEEEEEEEecChHHhhhChhhEEECCCCCcccCCCCCccCCC-CCHHHHH-HHHHHHHHHHHcCCCEEE-eeeeecCCCC
Confidence 998654433 25565433333222 3333 4556552 2233444432 555655 6655555421
Q ss_pred C---------C----ChhHHHHHHHHHHHHHHhcCCCcEEEEeCC-CC-------CCcchhhhhcccCcCCCCCEEEEEe
Q 008330 220 K---------Q----NVKDWYRYMQLGAEAVHAANPEVLVILSGL-NF-------DKDLSFVRNQAVNLTFTGKLVFEAH 278 (570)
Q Consensus 220 ~---------~----~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~-~w-------~~dl~~~~~~p~~l~~~~nlVys~H 278 (570)
. . -.+....+++.+.+++++.+-..=+=|=|. .| |+++..+.. .--+.++=
T Consensus 153 ~~~~l~y~~~~~~~~r~~aI~~Fl~~a~~~l~~~~v~vSaDVfG~~~~~~~~~~iGQ~~~~~a~--------~vD~IsPM 224 (316)
T PF13200_consen 153 RLSGLDYSENDTEESRVDAITDFLAYAREELHPYGVPVSADVFGYVAWSPDDMGIGQDFEKIAE--------YVDYISPM 224 (316)
T ss_pred cccccccCCCCCcchHHHHHHHHHHHHHHHHhHcCCCEEEEecccccccCCCCCcCCCHHHHhh--------hCCEEEec
Confidence 0 0 124456677777888888765443333232 23 233332221 11244555
Q ss_pred ecCCCCCCCC--CCCCCcchhhHHHHHHHHHHHHHHhc-CCC---eEEeccccCCCCCC--cchHHHHHHHHHHHHHCCC
Q 008330 279 WYGFTDGQAW--VDGNPNQVCGRVVDNVMRLSGFLLEQ-GWP---LFVSEFGADLRGNN--VNDNRYLNCFFGVAAELDW 350 (570)
Q Consensus 279 ~Y~~~~~~~w--~~~~~~~~~~~~~~~~~~~~g~l~~~-g~P---v~iGEFG~~~~~~~--~~~~~~~~~~~~~~~~~gi 350 (570)
.|+-...... ...+....++-+...+.+....+... +.+ =++=-|.......+ .-....++..+..+++.|+
T Consensus 225 iYPSh~~~g~~g~~~P~~~PY~~v~~~~~~~~~~~~~~~~~~~~RPWlQ~Ft~~~~~~~~~~Yg~~ev~aQI~A~~d~g~ 304 (316)
T PF13200_consen 225 IYPSHYGPGFFGIDKPDLEPYEIVYRSLKRAKERLRGLEGPAIIRPWLQDFTASWLGKNYKEYGPEEVRAQIQALKDAGI 304 (316)
T ss_pred ccccccCcccCCCCCcccChHHHHHHHHHHHHHHhhcCCCCCeEecccccccccccccCccccCHHHHHHHHHHHHHcCC
Confidence 5542111111 11121222233333443322222211 111 24555665543321 1135778888999999998
Q ss_pred -ceEEeccCc
Q 008330 351 -DWALWTLVG 359 (570)
Q Consensus 351 -gw~~W~~~G 359 (570)
+|++|.-.+
T Consensus 305 ~~~llWna~n 314 (316)
T PF13200_consen 305 EGWLLWNASN 314 (316)
T ss_pred CeEEEECCCC
Confidence 599998653
|
|
| >KOG2233 consensus Alpha-N-acetylglucosaminidase [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=92.50 E-value=0.68 Score=50.26 Aligned_cols=169 Identities=15% Similarity=0.135 Sum_probs=95.1
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchh-hhhhhhc-cchh----hccCcc-----cCCCCCCCchHHHHHHH
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTV-RQSFQKL-GLLE----AIGGIQ-----SNNPSIVDLPLIKAFQA 146 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv-~~s~~~l-g~~~----~~~g~~-----~~nP~~~~~t~l~~ld~ 146 (570)
.+..+|.|+-+|||.+=.|..-+.+=.+.|....+ ++.++.. +-+. ...|+. ...|.+.. .-+-.=++
T Consensus 80 WeR~iDWmALnGinl~la~~gQEaIWqkVf~~lgl~~eeldeyftgpAflAW~RMGNl~awgGpLs~aw~~-~ql~Lqkr 158 (666)
T KOG2233|consen 80 WEREIDWMALNGINLVLAPLGQEAIWQKVFMGLGLQREELDEYFTGPAFLAWHRMGNLHAWGGPLSPAWML-NQLLLQKR 158 (666)
T ss_pred HHhHhhHHHHcCcceeeccchhHHHHHHHHHHcCCCHHHHHHhcccHHHHHHHHhcCccccCCCCCHHHHH-HHHHHHHH
Confidence 68889999999999998886543221111111001 0111110 0000 001111 11222211 11222358
Q ss_pred HHHHHhcCCCEEEEec---CCCC--------------CCc-------cccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 008330 147 VVASLGNNNVMVILDN---HISK--------------PGW-------CCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFN 202 (570)
Q Consensus 147 vV~~a~~~Gl~VILD~---H~~~--------------~~w-------~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk 202 (570)
+|+...+.||-++|-- |... +.| ||...-. + .|..| ++---.+++.+.++|.
T Consensus 159 Iidrm~~lGmTpvLPaFaG~VP~al~rlfPesnf~rl~rWn~f~s~~~C~l~v~-P--~dplF-~eIgs~Flr~~~kefG 234 (666)
T KOG2233|consen 159 IIDRMLELGMTPVLPAFAGHVPDALERLFPESNFTRLPRWNNFTSRYSCMLLVS-P--FDPLF-QEIGSTFLRHQIKEFG 234 (666)
T ss_pred HHHHHHHcCCCccchhhccccHHHHHHhCchhceeeccccCCCCcceeeeEEcc-C--CcchH-HHHHHHHHHHHHHHhC
Confidence 9999999999999853 2221 122 2321000 0 01111 2333468899999999
Q ss_pred CCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCC
Q 008330 203 GVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGL 251 (570)
Q Consensus 203 ~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~ 251 (570)
+..|+.+.|.+||-..+....+-......+++++.+++|++.+=.+.|-
T Consensus 235 ~~tniy~~DpFNE~~Pp~sepey~~staaAiyesm~kvdknaVWllQgW 283 (666)
T KOG2233|consen 235 GVTNIYSADPFNEILPPESEPEYVKSTAAAIYESMKKVDKNAVWLLQGW 283 (666)
T ss_pred CcccccccCcccccCCCCCChHHHHHHHHHHHHHHhccCcceEEeeecc
Confidence 9999999999999877754444445566778889999999988777763
|
|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
Probab=91.28 E-value=5.5 Score=41.74 Aligned_cols=159 Identities=15% Similarity=0.198 Sum_probs=86.2
Q ss_pred ChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 76 QPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
+.++++++.++++|||+|=+-+-.. ...-|++... ... ....|....+| .++-|+.+|++|.++|
T Consensus 19 ~~~~~~l~~l~~~~~N~V~~qVr~~--gda~Y~S~~~-p~s------~~~~g~~~~~p------g~DpL~~~I~eaHkrG 83 (311)
T PF02638_consen 19 EQIDEMLDDLKSAGFNAVFVQVRPR--GDALYPSDIE-PWS------GYLTGKQGKDP------GFDPLEFMIEEAHKRG 83 (311)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEeC--cEEEeccccc-ccc------cccCCCCCCCC------CccHHHHHHHHHHHcC
Confidence 3478999999999999987755432 1111222111 000 00111112223 4678999999999999
Q ss_pred CEEEEec--CCC----------CCCccc--------cCCC--CCCCCCCCCC--CHHHHHHHHHHHHHHhCCCCcEEEEe
Q 008330 156 VMVILDN--HIS----------KPGWCC--------SNSD--GNGFFGDQYF--NPDLWIKGLTKMATIFNGVRNVVGMS 211 (570)
Q Consensus 156 l~VILD~--H~~----------~~~w~~--------~~~d--gng~~~d~~~--~~~~~~~~w~~iA~ryk~~p~Vig~d 211 (570)
|.|.-=+ ... .|.|.. ...+ +...|-|... .++..+++.+.|+++|. -..|- ||
T Consensus 84 levHAW~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~Yd-vDGIh-lD 161 (311)
T PF02638_consen 84 LEVHAWFRVGFNAPDVSHILKKHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNYD-VDGIH-LD 161 (311)
T ss_pred CEEEEEEEeecCCCchhhhhhcCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcCC-CCeEE-ec
Confidence 9986221 110 122311 1100 1112222211 13455788899999995 55554 55
Q ss_pred -cc--------CCCCC----------CCCC-----hhHHH-----HHHHHHHHHHHhcCCCcEEEEeCC
Q 008330 212 -LR--------NELRG----------PKQN-----VKDWY-----RYMQLGAEAVHAANPEVLVILSGL 251 (570)
Q Consensus 212 -L~--------NEP~~----------~~~~-----~~~W~-----~~~~~~~~aIr~~dp~~lIiVeG~ 251 (570)
.+ +++.. +..+ +.+|+ .+++++.++|++++|+..+-++..
T Consensus 162 dy~yp~~~~g~~~~~~~~y~~~~g~~~~~~~~d~~W~~WRr~~I~~~V~~i~~~ik~~kP~v~~sisp~ 230 (311)
T PF02638_consen 162 DYFYPPPSFGYDFPDVAAYEKYTGKDPFSSPEDDAWTQWRRDNINNFVKRIYDAIKAIKPWVKFSISPF 230 (311)
T ss_pred ccccccccCCCCCccHHHHHHhcCcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence 11 00000 0001 23464 578899999999999999998765
|
|
| >COG1649 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=90.76 E-value=11 Score=40.91 Aligned_cols=160 Identities=14% Similarity=0.136 Sum_probs=85.7
Q ss_pred ChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 76 QPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
..+.++++.++++|||+|=.-+....-. -|.+-..+.+ ...+|... ....++-|..+|+.|.++|
T Consensus 64 ~el~~~ld~l~~ln~NTv~~qV~~~G~~--lypS~~~p~s-------~~~~~~~~------~~~g~DpLa~~I~~AHkr~ 128 (418)
T COG1649 64 QELKDILDDLQKLNFNTVYPQVWNDGDA--LYPSAVLPWS-------DGLPGVLG------VDPGYDPLAFVIAEAHKRG 128 (418)
T ss_pred HHHHHHHHHHHHcCCceeEEEEecCccc--cccccccccc-------cCcCcccC------CCCCCChHHHHHHHHHhcC
Confidence 4478899999999999997755321100 0211110000 00112111 2234577999999999999
Q ss_pred CEEEE--e----------cCCCCCCccccCCC------CCC----CCCCCCCCH--HHH-HHHHHHHHHHhCCCC----c
Q 008330 156 VMVIL--D----------NHISKPGWCCSNSD------GNG----FFGDQYFNP--DLW-IKGLTKMATIFNGVR----N 206 (570)
Q Consensus 156 l~VIL--D----------~H~~~~~w~~~~~d------gng----~~~d~~~~~--~~~-~~~w~~iA~ryk~~p----~ 206 (570)
|.|+- . .|...+.|-....+ +++ +|=|. ..+ .+| .++...|+++|.=.. .
T Consensus 129 l~v~aWf~~~~~a~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ldP-g~Pevq~~i~~lv~evV~~YdvDGIQfDd 207 (418)
T COG1649 129 LEVHAWFNPYRMAPPTSPLTKRHPHWLTTKRPGWVYVRHQGWGKRVWLDP-GIPEVQDFITSLVVEVVRNYDVDGIQFDD 207 (418)
T ss_pred CeeeechhhcccCCCCChhHhhCCCCcccCCCCeEEEecCCceeeeEeCC-CChHHHHHHHHHHHHHHhCCCCCceecce
Confidence 99974 1 22222333222111 122 22222 222 334 467778888886432 2
Q ss_pred EEEEe----------------ccCCCCCCCCChhHHH-----HHHHHHHHHHHhcCCCcEEEEeCC
Q 008330 207 VVGMS----------------LRNELRGPKQNVKDWY-----RYMQLGAEAVHAANPEVLVILSGL 251 (570)
Q Consensus 207 Vig~d----------------L~NEP~~~~~~~~~W~-----~~~~~~~~aIr~~dp~~lIiVeG~ 251 (570)
+..+. -.+.|-.....+.+|+ ++|+++..+|+++.|+..+-|...
T Consensus 208 ~fy~~~~~gy~~~~~~~y~~et~~~~~~~~~~w~~WRr~~i~~~v~~i~~~VKavKp~v~~svsp~ 273 (418)
T COG1649 208 YFYYPIPFGYDPDTVTLYRYETGKGPPSNPDQWTDWRRDNITALVAQISQTVKAVKPNVKFSVSPF 273 (418)
T ss_pred eecccCccccCchHHHHHHhhccCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHhhCCCeEEEEccC
Confidence 22111 1111111000123664 578999999999999999999873
|
|
| >PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=90.33 E-value=0.35 Score=50.59 Aligned_cols=188 Identities=15% Similarity=0.215 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHH-HHH---h--CCCCcEEEEeccC
Q 008330 141 IKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKM-ATI---F--NGVRNVVGMSLRN 214 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~i-A~r---y--k~~p~Vig~dL~N 214 (570)
+++.|++.+-+.+-|+.||..+-...+.- ......+.--|..- |+. | ...-+|-++||.|
T Consensus 108 ~~rwd~l~~F~~~tG~~liFgLNAL~g~~--------------~~~~~~~~g~WnssNA~~Ll~Yt~skgy~I~~WELGN 173 (319)
T PF03662_consen 108 MSRWDELNNFAQKTGLKLIFGLNALLGRR--------------QLADRDWDGSWNSSNAQSLLKYTASKGYNIDSWELGN 173 (319)
T ss_dssp ----HHHHHHHHHHT-EEEEEE-TTTS-H--------------HHHHHHHHHHHHHH-TTTEEEEEESS-GGG-------
T ss_pred hhHHHHHHHHHHHhCCEEEEEecccCCCC--------------CCCCCCcCCCCChHHHHHHHHHHHHcCCCcccccccc
Confidence 46789999999999999999876543210 00001222333221 111 2 1122466899999
Q ss_pred CCCCCC----CChhHHHHHH---HHHHHHHHhc-CCCcEEEEeCCCCCCcc--hhhhhcccCcCCCCCEEEEEeecCCCC
Q 008330 215 ELRGPK----QNVKDWYRYM---QLGAEAVHAA-NPEVLVILSGLNFDKDL--SFVRNQAVNLTFTGKLVFEAHWYGFTD 284 (570)
Q Consensus 215 EP~~~~----~~~~~W~~~~---~~~~~aIr~~-dp~~lIiVeG~~w~~dl--~~~~~~p~~l~~~~nlVys~H~Y~~~~ 284 (570)
||.+.+ -+..++-+-+ +++++.|... .+.-+|+-.+..++.+. .++....-. -=-+++.|+|....
T Consensus 174 El~g~g~~~~v~a~qyakD~~~Lr~il~~iy~~~~~~P~v~gP~~~~d~~w~~~FL~~~g~~----~vD~vT~H~Y~lg~ 249 (319)
T PF03662_consen 174 ELNGSGVGASVSAEQYAKDFIQLRKILNEIYKNALPGPLVVGPGGFFDADWLKEFLKASGPG----VVDAVTWHHYNLGS 249 (319)
T ss_dssp -HHHHSSSTT--HHHHHHHH---HHHHHHHHHH-TT---EEEEEESS-GGGHHHHHHHTTTT------SEEEEEEEEE--
T ss_pred ccCCCCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCCeEECCCCCCCHHHHHHHHHhcCCC----ccCEEEEEecCCCC
Confidence 997643 1333343222 3344444332 34444555544444332 123221110 12367999995321
Q ss_pred CCCCC--CCCCc-chhhHHHHHHHHHHHHHH--hcCCCeEEeccccCCCCCC-cchHHHHHHHHHHHHH
Q 008330 285 GQAWV--DGNPN-QVCGRVVDNVMRLSGFLL--EQGWPLFVSEFGADLRGNN-VNDNRYLNCFFGVAAE 347 (570)
Q Consensus 285 ~~~w~--~~~~~-~~~~~~~~~~~~~~g~l~--~~g~Pv~iGEFG~~~~~~~-~~~~~~~~~~~~~~~~ 347 (570)
...-. .+..+ ..-..+...+......+. ..+.|+++||-|....++. ...++|...|. |+++
T Consensus 250 g~d~~l~~~~l~p~~Ld~~~~~~~~~~~~v~~~~p~~~~WlGEtg~Ay~gG~~~vSdtFv~~Fw-wLDq 317 (319)
T PF03662_consen 250 GRDPALIEDFLNPSYLDTLADTFQKLQQVVQEYGPGKPVWLGETGSAYNGGAPGVSDTFVAGFW-WLDQ 317 (319)
T ss_dssp TT-TT-HHHHTS--HHHHHHHHHHHHH-----HHH---EEEEEEEEESTT--TTTTTSTHHHHH-HHHH
T ss_pred CchHHHHHHhcChhhhhHHHHHHHHHhhhhcccCCCCCeEEeCcccccCCCCCCccHHHHHHHH-HHHh
Confidence 10000 00000 011122222222222221 1668999999999876543 23456666664 3444
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A. |
| >PLN02877 alpha-amylase/limit dextrinase | Back alignment and domain information |
|---|
Probab=90.14 E-value=6.8 Score=46.97 Aligned_cols=37 Identities=32% Similarity=0.500 Sum_probs=27.6
Q ss_pred CcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEe---cCCC
Q 008330 127 GIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILD---NHIS 165 (570)
Q Consensus 127 g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD---~H~~ 165 (570)
|-|..+|. +..-+..|+++|+.|.++||.||+| +|..
T Consensus 453 gSYatdP~--g~~RI~efk~mV~~lH~~GI~VImDVVyNHt~ 492 (970)
T PLN02877 453 GSYASNPD--GPCRIIEFRKMVQALNRIGLRVVLDVVYNHLH 492 (970)
T ss_pred cccccCCC--CcchHHHHHHHHHHHHHCCCEEEEEECCcccc
Confidence 33444552 2344677999999999999999999 5774
|
|
| >TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive | Back alignment and domain information |
|---|
Probab=90.09 E-value=7.3 Score=47.57 Aligned_cols=99 Identities=21% Similarity=0.457 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHhcCCCEEEEe---cCCCC--------CCccc-cCCCCC---CCCCCCC-C-C---HHHHHHHHHHHHHH
Q 008330 141 IKAFQAVVASLGNNNVMVILD---NHISK--------PGWCC-SNSDGN---GFFGDQY-F-N---PDLWIKGLTKMATI 200 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VILD---~H~~~--------~~w~~-~~~dgn---g~~~d~~-~-~---~~~~~~~w~~iA~r 200 (570)
++.|+++|++|.++||.|||| +|... |+|.. ...++. .|-++.. . . .+.+++..+..++.
T Consensus 554 i~EfK~LV~alH~~GI~VILDVVyNHt~~~~~f~~~~p~Yy~~~~~~G~~~~~~~g~~l~~e~~~vrk~iiDsl~yWv~e 633 (1111)
T TIGR02102 554 IAEFKNLINEIHKRGMGVILDVVYNHTAKVYIFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHEMSRRILVDSIKYLVDE 633 (1111)
T ss_pred HHHHHHHHHHHHHCCCEEEEecccccccccccccccCCCceEeeCCCCCcccccCCCCCCcCCHHHHHHHHHHHHHHHHh
Confidence 577999999999999999999 46542 22210 000111 1111110 0 1 12233444444555
Q ss_pred hCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 201 FNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 201 yk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
|+ ....- ||++..- ... .++++..++++++|+.+++-|+
T Consensus 634 y~-VDGFR-fDl~g~~-----d~~----~~~~~~~~l~~~dP~~~liGE~ 672 (1111)
T TIGR02102 634 FK-VDGFR-FDMMGDH-----DAA----SIEIAYKEAKAINPNIIMIGEG 672 (1111)
T ss_pred cC-CcEEE-EeccccC-----CHH----HHHHHHHHHHHhCcCEEEEEec
Confidence 54 23433 7888531 122 2345567788899998888886
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645). |
| >COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.63 E-value=1.1 Score=50.98 Aligned_cols=71 Identities=20% Similarity=0.208 Sum_probs=45.3
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+++.+..+++|||++|=| |+..+-... +|+ .|- .+.+.....+- --+-|+++||+|-++||
T Consensus 167 a~~llpYl~elG~T~IELMPv~e~p~~~-sWG-------Yq~-------~g~yAp~sryG---tPedfk~fVD~aH~~GI 228 (628)
T COG0296 167 AIELLPYLKELGITHIELMPVAEHPGDR-SWG-------YQG-------TGYYAPTSRYG---TPEDFKALVDAAHQAGI 228 (628)
T ss_pred HHHHhHHHHHhCCCEEEEcccccCCCCC-CCC-------CCc-------ceeccccccCC---CHHHHHHHHHHHHHcCC
Confidence 467788999999999998 776543322 111 000 01122211221 23568999999999999
Q ss_pred EEEEec---CCCC
Q 008330 157 MVILDN---HISK 166 (570)
Q Consensus 157 ~VILD~---H~~~ 166 (570)
.||||. |-.+
T Consensus 229 gViLD~V~~HF~~ 241 (628)
T COG0296 229 GVILDWVPNHFPP 241 (628)
T ss_pred EEEEEecCCcCCC
Confidence 999994 6544
|
|
| >KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=88.22 E-value=0.27 Score=52.10 Aligned_cols=92 Identities=23% Similarity=0.497 Sum_probs=58.5
Q ss_pred eeeeecCC--CCceecCCCCCC---CCccccCCcceeecccceEEeecc--CCccceeccccCCCCCceeEeeccccEEE
Q 008330 421 LCVQRKSF--LDPLTLGPCTES---EAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICTDCGSTWEIISDSKMHLS 493 (570)
Q Consensus 421 ~c~~~~~~--~~~~~~~~c~~~---~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~~~~~~W~~~s~~~~~~~ 493 (570)
.|++..+. .+.+.++.|-++ ++|.+.-+..-.+....+||.+.. .|+++++ .-|.....+|+.+-.+. ||
T Consensus 442 ~Cl~s~~~~~~~~~gl~~C~~s~~nqqwa~~~t~~~~~~~~elCL~v~~~~pg~~v~l-~~C~~~e~~q~~v~~~~-~l- 518 (559)
T KOG3738|consen 442 NCLDSQGQNSQEALGLASCHGSGGNQQWAFLRTSTQLITHRELCLAVGSNTPGSPVAL-VPCGNNETKQRWVELGG-HL- 518 (559)
T ss_pred hhhhhhhcccccCcceeecccCCCCcchhhhhhhhhHHHHHhhhheeecCCCCCeEEE-EecCCCCCceEEEecCC-ch-
Confidence 47776332 233778999875 799994333222246789999888 5999999 78984444554443332 32
Q ss_pred EecCCCceEEEeecCCCc--eeecce
Q 008330 494 SKADNGTTVCLDVDSSNT--IVTNTC 517 (570)
Q Consensus 494 ~~~~~~~~~cld~~~~~~--~~~~~c 517 (570)
...++.||||...-|. +.-+.|
T Consensus 519 --~h~~s~KOGd~~~~g~~~l~~~~C 542 (559)
T KOG3738|consen 519 --LHAGSHLCLDNPLKGRWLLEVSTC 542 (559)
T ss_pred --hcccccceeccccCCCcceeeccc
Confidence 3458999999985443 444544
|
|
| >TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase | Back alignment and domain information |
|---|
Probab=87.88 E-value=1.3 Score=49.98 Aligned_cols=69 Identities=19% Similarity=0.297 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHcCCcEEEe-cccccccccC-ccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 77 PMDMLSKRVVDMGFNCVRL-TWPLYLATND-SLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~-~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
.+.+-++.|+++|+|+|=| |+... -..+ .|. + ...+..+|.+.. .+.|+++|++|.++
T Consensus 28 gi~~~l~yl~~lG~~~i~l~Pi~~~-~~~~~gY~---~-------------~d~~~id~~~Gt---~~~~~~lv~~ah~~ 87 (543)
T TIGR02403 28 GIIEKLDYLKKLGVDYIWLNPFYVS-PQKDNGYD---V-------------SDYYAINPLFGT---MADFEELVSEAKKR 87 (543)
T ss_pred HHHHhHHHHHHcCCCEEEECCcccC-CCCCCCCC---c-------------cccCccCcccCC---HHHHHHHHHHHHHC
Confidence 3556678999999999998 44221 0100 111 0 112345666543 47899999999999
Q ss_pred CCEEEEec---CCC
Q 008330 155 NVMVILDN---HIS 165 (570)
Q Consensus 155 Gl~VILD~---H~~ 165 (570)
||+||||+ |..
T Consensus 88 gi~vilD~v~NH~~ 101 (543)
T TIGR02403 88 NIKIMLDMVFNHTS 101 (543)
T ss_pred CCEEEEEECccccc
Confidence 99999994 654
|
Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor. |
| >PRK10933 trehalose-6-phosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=87.83 E-value=1.4 Score=49.84 Aligned_cols=69 Identities=17% Similarity=0.319 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+++|=| |+...--....|. + ...+..+|.+.. .+.|+++|++|.++||
T Consensus 35 i~~~ldyl~~lGv~~i~l~P~~~~~~~~~gY~---~-------------~d~~~id~~~Gt---~~d~~~lv~~~h~~gi 95 (551)
T PRK10933 35 VTQRLDYLQKLGVDAIWLTPFYVSPQVDNGYD---V-------------ANYTAIDPTYGT---LDDFDELVAQAKSRGI 95 (551)
T ss_pred HHHhhHHHHhCCCCEEEECCCCCCCCCCCCCC---c-------------ccCCCcCcccCC---HHHHHHHHHHHHHCCC
Confidence 456678999999999988 5531100000111 0 112455777653 4679999999999999
Q ss_pred EEEEec---CCC
Q 008330 157 MVILDN---HIS 165 (570)
Q Consensus 157 ~VILD~---H~~ 165 (570)
+||||+ |..
T Consensus 96 ~vilD~V~NH~s 107 (551)
T PRK10933 96 RIILDMVFNHTS 107 (551)
T ss_pred EEEEEECCCCcc
Confidence 999994 654
|
|
| >COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.77 E-value=1.1 Score=51.78 Aligned_cols=80 Identities=25% Similarity=0.370 Sum_probs=50.2
Q ss_pred HHHHHHHHcCCcEEEe-cccccccccCccccchhhhhh-hhccchh----hccCcccCCCCCCCchHHHHHHHHHHHHhc
Q 008330 80 MLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSF-QKLGLLE----AIGGIQSNNPSIVDLPLIKAFQAVVASLGN 153 (570)
Q Consensus 80 ~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~-~~lg~~~----~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~ 153 (570)
.+++.++++|+++|.| |+....-.+.. . ...+ ...|... +..+-|..+|. -.+.+..|+..|+++.+
T Consensus 204 ~~i~yLk~LGvtaVeLLPV~~~~~~~~l-~----~~gl~n~WGYdP~~fFAp~~~Yss~p~--p~~~i~EfK~mV~~lHk 276 (697)
T COG1523 204 VIIDYLKDLGVTAVELLPVFDFYDEPHL-D----KSGLNNNWGYDPLNFFAPEGRYASNPE--PATRIKEFKDMVKALHK 276 (697)
T ss_pred cHHHHHHHhCCceEEEecceEEeccccc-c----ccccccccCCCcccccCCCccccCCCC--cchHHHHHHHHHHHHHH
Confidence 3599999999999998 77654332210 0 0000 0011111 12344555665 23467789999999999
Q ss_pred CCCEEEEe---cCCCC
Q 008330 154 NNVMVILD---NHISK 166 (570)
Q Consensus 154 ~Gl~VILD---~H~~~ 166 (570)
+||-|||| +|...
T Consensus 277 aGI~VILDVVfNHTae 292 (697)
T COG1523 277 AGIEVILDVVFNHTAE 292 (697)
T ss_pred cCCEEEEEEeccCccc
Confidence 99999999 58753
|
|
| >TIGR02456 treS_nterm trehalose synthase | Back alignment and domain information |
|---|
Probab=86.95 E-value=1.7 Score=49.14 Aligned_cols=70 Identities=20% Similarity=0.243 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 77 PMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
.+.+-++.|+++|+|+|=| |+......+..|. + ...+..+|.+-+ .+.++++|++|.++|
T Consensus 29 gi~~~Ldyl~~LGv~~i~L~Pi~~~~~~~~gY~---~-------------~dy~~vd~~~Gt---~~df~~Lv~~ah~~G 89 (539)
T TIGR02456 29 GLTSKLDYLKWLGVDALWLLPFFQSPLRDDGYD---V-------------SDYRAILPEFGT---IDDFKDFVDEAHARG 89 (539)
T ss_pred HHHHhHHHHHHCCCCEEEECCCcCCCCCCCCCC---c-------------ccccccChhhCC---HHHHHHHHHHHHHCC
Confidence 3556688999999999998 4422110011111 0 112345666543 477999999999999
Q ss_pred CEEEEe---cCCC
Q 008330 156 VMVILD---NHIS 165 (570)
Q Consensus 156 l~VILD---~H~~ 165 (570)
|+|||| +|..
T Consensus 90 i~vilD~V~NH~s 102 (539)
T TIGR02456 90 MRVIIDLVLNHTS 102 (539)
T ss_pred CEEEEEeccCcCC
Confidence 999999 4653
|
Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530). |
| >TIGR02100 glgX_debranch glycogen debranching enzyme GlgX | Back alignment and domain information |
|---|
Probab=85.96 E-value=1.3 Score=51.41 Aligned_cols=79 Identities=20% Similarity=0.306 Sum_probs=43.6
Q ss_pred HHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEE
Q 008330 81 LSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVI 159 (570)
Q Consensus 81 ~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VI 159 (570)
.++.|+++|+|+|=| |+... .... ..+..+.-...|.. ....+..+|.+....-.+.|+++|++|.++||+||
T Consensus 189 ~LdyLk~LGvtaI~L~Pi~~~-~~~~---~~~~~~~~~ywGYd--~~~y~a~d~~y~~~g~~~efk~LV~~~H~~GI~VI 262 (688)
T TIGR02100 189 MIDYLKKLGVTAVELLPVHAF-IDDR---HLLEKGLRNYWGYN--TLGFFAPEPRYLASGQVAEFKTMVRALHDAGIEVI 262 (688)
T ss_pred hhHHHHHcCCCEEEECCcccC-Cccc---cccccCCCCccCcC--cccccccChhhcCCCCHHHHHHHHHHHHHCCCEEE
Confidence 478999999999999 55321 1110 00000000000000 00112334444211236789999999999999999
Q ss_pred Ee---cCCC
Q 008330 160 LD---NHIS 165 (570)
Q Consensus 160 LD---~H~~ 165 (570)
|| +|..
T Consensus 263 lDvV~NHt~ 271 (688)
T TIGR02100 263 LDVVYNHTA 271 (688)
T ss_pred EEECcCCcc
Confidence 99 4654
|
This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. |
| >PRK09505 malS alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=85.29 E-value=2.1 Score=49.61 Aligned_cols=75 Identities=11% Similarity=0.117 Sum_probs=42.8
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCc-----ccCCCCCCCchHHHHHHHHHHHH
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGI-----QSNNPSIVDLPLIKAFQAVVASL 151 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~-----~~~nP~~~~~t~l~~ld~vV~~a 151 (570)
+.+-++.|++||||+|=| |+-.. +... .+..+ ..++.. ..+.|. +..+|.+. -.+.|+++|++|
T Consensus 232 i~~kLdyl~~LGv~aIwlsPi~~~-~~~~-~~~g~-~g~~~~----~~yhgY~~~D~~~id~~~G---t~~dfk~Lv~~a 301 (683)
T PRK09505 232 LTEKLDYLQQLGVNALWISSPLEQ-IHGW-VGGGT-KGDFPH----YAYHGYYTLDWTKLDANMG---TEADLRTLVDEA 301 (683)
T ss_pred HHHhhHHHHHcCCCEEEeCccccc-cccc-ccccc-ccCCCc----CCCCCCCccccccCCCCCC---CHHHHHHHHHHH
Confidence 456688999999999998 33211 1000 00000 000000 011121 23355553 357799999999
Q ss_pred hcCCCEEEEec
Q 008330 152 GNNNVMVILDN 162 (570)
Q Consensus 152 ~~~Gl~VILD~ 162 (570)
.++||+||||+
T Consensus 302 H~~Gi~VilD~ 312 (683)
T PRK09505 302 HQRGIRILFDV 312 (683)
T ss_pred HHCCCEEEEEE
Confidence 99999999994
|
|
| >PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=85.25 E-value=3 Score=44.30 Aligned_cols=137 Identities=15% Similarity=0.157 Sum_probs=79.3
Q ss_pred HHHHHHHHHHcCCcEEEeccccc----ccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhc
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLY----LATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGN 153 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~----~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~ 153 (570)
.++.++.++++|+.-|=|+--.+ |+..+ +.+..+. .. ..--+.+.+++++|++
T Consensus 93 ~dqW~~~ak~aGakY~VlTakHHDGF~LW~S~-~t~~~v~----------------~~------~~krDiv~El~~A~rk 149 (346)
T PF01120_consen 93 ADQWAKLAKDAGAKYVVLTAKHHDGFCLWPSK-YTDYNVV----------------NS------GPKRDIVGELADACRK 149 (346)
T ss_dssp HHHHHHHHHHTT-SEEEEEEE-TT--BSS--T-T-SSBGG----------------GG------GGTS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeehhhcCccccCCCC-CCccccc----------------CC------CCCCCHHHHHHHHHHH
Confidence 57889999999999988755321 22110 0011110 00 0123679999999999
Q ss_pred CCCEEEEecCCCCCCccccCCCCCCCCCCCC-----------CCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCC
Q 008330 154 NNVMVILDNHISKPGWCCSNSDGNGFFGDQY-----------FNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQN 222 (570)
Q Consensus 154 ~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~-----------~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~ 222 (570)
+||++.|=+|.. .|......... ..+.. +-.+.+..-++.|.++| .+.++-||.-....
T Consensus 150 ~Glk~G~Y~S~~--dw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ql~EL~~~Y--~~d~lWfDg~~~~~----- 219 (346)
T PF01120_consen 150 YGLKFGLYYSPW--DWHHPDYPPDE-EGDENGPADGPGNWQRYYNEYWLAQLRELLTRY--KPDILWFDGGWPDP----- 219 (346)
T ss_dssp TT-EEEEEEESS--SCCCTTTTSSC-HCHHCC--HCCHHHHHHHHHHHHHHHHHHHHCS--TESEEEEESTTSCC-----
T ss_pred cCCeEEEEecch--HhcCcccCCCc-cCCcccccccchhhHhHhhhhhHHHHHHHHhCC--CcceEEecCCCCcc-----
Confidence 999999965543 34211100000 00000 00124556777888999 77888899987752
Q ss_pred hhHHHHHHHHHHHHHHhcCCCcEEEEe
Q 008330 223 VKDWYRYMQLGAEAVHAANPEVLVILS 249 (570)
Q Consensus 223 ~~~W~~~~~~~~~aIr~~dp~~lIiVe 249 (570)
.+.|.. .+.++.||+..|+.+|.-.
T Consensus 220 ~~~~~~--~~~~~~i~~~qp~~ii~~r 244 (346)
T PF01120_consen 220 DEDWDS--AELYNWIRKLQPDVIINNR 244 (346)
T ss_dssp CTHHHH--HHHHHHHHHHSTTSEEECC
T ss_pred ccccCH--HHHHHHHHHhCCeEEEecc
Confidence 234433 6788999999998877653
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B .... |
| >PRK03705 glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=84.95 E-value=1.7 Score=50.09 Aligned_cols=79 Identities=18% Similarity=0.243 Sum_probs=44.4
Q ss_pred HHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCc--hHHHHHHHHHHHHhcCCCE
Q 008330 81 LSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDL--PLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 81 ~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~--t~l~~ld~vV~~a~~~Gl~ 157 (570)
.++.|+++|+|+|=| |+.... ..... .....-...|.. ....+..+|.+... ..++.|+++|++|.++||.
T Consensus 184 ~LdYLk~LGvt~I~L~Pv~~~~-~~~~~---~~~g~~~ywGYd--~~~yfa~d~~ygt~~~~~~~efk~LV~~~H~~GI~ 257 (658)
T PRK03705 184 MIAYLKQLGITALELLPVAQFA-SEPRL---QRMGLSNYWGYN--PLAMFALDPAYASGPETALDEFRDAVKALHKAGIE 257 (658)
T ss_pred chHHHHHcCCCEEEecCcccCC-Ccccc---cccccccccCcc--cccccccccccCCCCcchHHHHHHHHHHHHHCCCE
Confidence 488999999999999 554311 10000 000000000100 00113345554321 2467899999999999999
Q ss_pred EEEe---cCCC
Q 008330 158 VILD---NHIS 165 (570)
Q Consensus 158 VILD---~H~~ 165 (570)
|||| +|..
T Consensus 258 VIlDvV~NHt~ 268 (658)
T PRK03705 258 VILDVVFNHSA 268 (658)
T ss_pred EEEEEcccCcc
Confidence 9999 4765
|
|
| >PRK09997 hydroxypyruvate isomerase; Provisional | Back alignment and domain information |
|---|
Probab=83.27 E-value=14 Score=37.08 Aligned_cols=153 Identities=11% Similarity=0.039 Sum_probs=86.9
Q ss_pred ChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCc--cc---------CCCCCCCchHHHHH
Q 008330 76 QPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGI--QS---------NNPSIVDLPLIKAF 144 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~--~~---------~nP~~~~~t~l~~l 144 (570)
.++++.++.++++||..|=|..... . ....+++.++..|+.-....+ .. .+|. ......+.+
T Consensus 15 ~~l~~~l~~~a~~Gf~~VEl~~~~~-~-----~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 87 (258)
T PRK09997 15 YDFLARFEKAAQCGFRGVEFMFPYD-Y-----DIEELKQVLASNKLEHTLHNLPAGDWAAGERGIACIPG-REEEFRDGV 87 (258)
T ss_pred CCHHHHHHHHHHhCCCEEEEcCCCC-C-----CHHHHHHHHHHcCCcEEEEcCCCCccccCcCccccCCC-cHHHHHHHH
Confidence 3689999999999999999844221 1 112344556666665321111 01 1232 123456789
Q ss_pred HHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCChh
Q 008330 145 QAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQNVK 224 (570)
Q Consensus 145 d~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~ 224 (570)
+++|+.|.+.|..+|.- |. ++. . .+ +. .....+.+.+.++.+++..+++.-++++|..|.+..+..
T Consensus 88 ~~~i~~a~~lga~~i~~-~~---g~~----~-~~-~~-~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~n~~~~~~~--- 153 (258)
T PRK09997 88 AAAIRYARALGNKKINC-LV---GKT----P-AG-FS-SEQIHATLVENLRYAANMLMKEDILLLIEPINHFDIPGF--- 153 (258)
T ss_pred HHHHHHHHHhCCCEEEE-CC---CCC----C-CC-CC-HHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCCcCCCCC---
Confidence 99999999999987653 21 110 0 00 00 001124456777888888877777899999886432111
Q ss_pred HHHHHHHHHHHHHHhcCCCcE-EEEeC
Q 008330 225 DWYRYMQLGAEAVHAANPEVL-VILSG 250 (570)
Q Consensus 225 ~W~~~~~~~~~aIr~~dp~~l-IiVeG 250 (570)
...-.+++.+.|+++++..+ +.++.
T Consensus 154 -~~~~~~~~~~ll~~v~~~~v~l~~D~ 179 (258)
T PRK09997 154 -HLTGTRQALKLIDDVGCCNLKIQYDI 179 (258)
T ss_pred -ccCCHHHHHHHHHHhCCCCEEEEeEH
Confidence 10112345566777775544 55553
|
|
| >TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type | Back alignment and domain information |
|---|
Probab=80.59 E-value=15 Score=43.97 Aligned_cols=111 Identities=23% Similarity=0.345 Sum_probs=62.6
Q ss_pred CcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEe---cCCCCCCcc-ccCCCC--CCCC---------------CCCCC
Q 008330 127 GIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILD---NHISKPGWC-CSNSDG--NGFF---------------GDQYF 185 (570)
Q Consensus 127 g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD---~H~~~~~w~-~~~~dg--ng~~---------------~d~~~ 185 (570)
|-|..+|. +..-+..|+++|++|.++||.|||| +|....+.. .+.-+. .++| ++...
T Consensus 391 gSYatdp~--g~~Ri~Efk~mV~alH~~Gi~VIlDVVyNHt~~~g~~~~s~ld~~~P~YY~r~~~~G~~~n~~~~~d~a~ 468 (898)
T TIGR02103 391 GSYATDPE--GPARIKEFREMVQALNKTGLNVVMDVVYNHTNASGPNDRSVLDKIVPGYYHRLNEDGGVENSTCCSNTAT 468 (898)
T ss_pred hhhccCCC--CchHHHHHHHHHHHHHHCCCEEEEEeecccccccCccCcccccccCcHhhEeeCCCCCeecCCCCcCCCC
Confidence 44555563 3455778999999999999999999 576542210 000000 0111 11101
Q ss_pred -CH---HHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 186 -NP---DLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 186 -~~---~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
.+ +.+++..+.-++.|+ ....- ||++..-. ...| +++.+++++++|+.+++=|+
T Consensus 469 e~~~Vrk~iiDsl~~W~~ey~-VDGFR-fDlm~~~~-----~~f~----~~~~~~l~~i~pdi~l~GEg 526 (898)
T TIGR02103 469 EHRMMAKLIVDSLVVWAKDYK-VDGFR-FDLMGHHP-----KAQM----LAAREAIKALTPEIYFYGEG 526 (898)
T ss_pred CCHHHHHHHHHHHHHHHHHcC-CCEEE-EechhhCC-----HHHH----HHHHHHHHHhCCCEEEEecC
Confidence 11 223344444455554 23443 88886542 2334 45667889999998888787
|
Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). |
| >KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=80.36 E-value=1.9 Score=48.63 Aligned_cols=64 Identities=23% Similarity=0.429 Sum_probs=47.8
Q ss_pred eeeeecCCCCceecCCC--CCCCCccccCCcceeecccceEEeeccCCccceeccccC--CCCCceeEee
Q 008330 421 LCVQRKSFLDPLTLGPC--TESEAWSYTPHKTISLKGAYFCLQAKHVGKPAKLGIICT--DCGSTWEIIS 486 (570)
Q Consensus 421 ~c~~~~~~~~~~~~~~c--~~~~~W~~~~~~~~~~~~~~~cl~a~~~g~~~~~~~~c~--~~~~~W~~~s 486 (570)
.|..+..... +.+.+| ..++.|.|..++.|.-+++++||++...+..+.+ ..|. ++.|+|.+..
T Consensus 507 ~cl~~~~~~~-v~l~~C~~~~~q~w~~~~~~~i~~~~sg~CL~~~~~~~~~~l-~~c~~~~~~Q~W~~~~ 574 (578)
T KOG3736|consen 507 LCLDVDDAGK-VTLYDCHKMGNQLWHYDKDGTLYHRNSGKCLEAAVDKNGLIL-VACDPSDPTQQWLFEH 574 (578)
T ss_pred EEeccccCCc-eEEEecccccccceEEcCCCceEcCCCCccccccCCCCCceE-eecCCCCCcceEEEEe
Confidence 6776632213 889999 4468999998888888899999999998765555 4444 5689999843
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 570 | ||||
| 1vrx_A | 358 | Endocellulase E1 From Acidothermus Cellulolyticus M | 2e-10 | ||
| 1ece_A | 358 | Acidothermus Cellulolyticus Endocellulase E1 Cataly | 1e-09 | ||
| 4dm1_A | 377 | Contribution Of Disulfide Bond Toward Thermostabili | 4e-05 | ||
| 2zum_A | 458 | Functional Analysis Of Hyperthermophilic Endocellul | 6e-05 | ||
| 3axx_A | 458 | Functional Analysis Of Hyperthermophilic Endocellul | 7e-05 | ||
| 3qhm_A | 458 | Crystal Analysis Of The Complex Structure, E342a-Ce | 1e-04 | ||
| 3qho_A | 458 | Crystal Analysis Of The Complex Structure, Y299f-Ce | 2e-04 | ||
| 3qhn_A | 458 | Crystal Analysis Of The Complex Structure, E201a-Ce | 4e-04 | ||
| 4dm2_A | 377 | Contribution Of Disulfide Bond Toward Thermostabili | 4e-04 |
| >pdb|1VRX|A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g Length = 358 | Back alignment and structure |
|
| >pdb|1ECE|A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose Length = 358 | Back alignment and structure |
|
| >pdb|4DM1|A Chain A, Contribution Of Disulfide Bond Toward Thermostability In Hyperthermostable Endocellulase Length = 377 | Back alignment and structure |
|
| >pdb|2ZUM|A Chain A, Functional Analysis Of Hyperthermophilic Endocellulase From The Archaeon Pyrococcus Horikoshii Length = 458 | Back alignment and structure |
|
| >pdb|3AXX|A Chain A, Functional Analysis Of Hyperthermophilic Endocellulase From The Archaeon Pyrococcus Horikoshii Length = 458 | Back alignment and structure |
|
| >pdb|3QHM|A Chain A, Crystal Analysis Of The Complex Structure, E342a-Cellotetraose, Of Endocellulase From Pyrococcus Horikoshii Length = 458 | Back alignment and structure |
|
| >pdb|3QHO|A Chain A, Crystal Analysis Of The Complex Structure, Y299f-Cellotetraose, Of Endocellulase From Pyrococcus Horikoshii Length = 458 | Back alignment and structure |
|
| >pdb|3QHN|A Chain A, Crystal Analysis Of The Complex Structure, E201a-Cellotetraose, Of Endocellulase From Pyrococcus Horikoshii Length = 458 | Back alignment and structure |
|
| >pdb|4DM2|A Chain A, Contribution Of Disulfide Bond Toward Thermostability In Hyperthermostable Endocellulase Length = 377 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 570 | |||
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 6e-72 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 8e-57 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 4e-24 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 2e-21 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 4e-21 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 4e-20 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 8e-20 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 1e-19 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 1e-17 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 1e-17 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 2e-17 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 6e-17 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 1e-16 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 1e-16 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 1e-16 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 2e-16 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 7e-16 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 9e-16 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 8e-15 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 4e-14 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 1e-13 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 2e-13 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 1e-12 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 8e-12 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 2e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-10 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 7e-06 | |
| 3k1f_M | 197 | Transcription initiation factor IIB; RNA polymeras | 3e-04 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 7e-04 |
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Length = 358 | Back alignment and structure |
|---|
Score = 233 bits (596), Expect = 6e-72
Identities = 74/387 (19%), Positives = 131/387 (33%), Gaps = 55/387 (14%)
Query: 38 PLSTNSRWIVDENGHRVKLACVNWVSHLEP-VVAEGLSKQPMDMLSKRVVDMGFNCVRLT 96
T+ R I+D N V++A +NW V GL + + ++ +G+N +RL
Sbjct: 5 YWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLP 64
Query: 97 WPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156
+ ++D L T+ S N + L ++ +VA G +
Sbjct: 65 Y-----SDDILKPGTMPNSI----------NFYQMNQDLQGLTSLQVMDKIVAYAGQIGL 109
Query: 157 MVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNEL 216
+ILD H + + + WI L +A + G VVG L NE
Sbjct: 110 RIILDRHRPDCSG------QSALWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLHNEP 163
Query: 217 RGP-----KQNVKDWYRYMQLGAEAVHAANPEVLVILSGLN--------FDKDLSFVRNQ 263
P DW + AV + NP +L+ + G+ + +L
Sbjct: 164 HDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYWWGGNLQGAGQY 223
Query: 264 AVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQ-GWPLFVSE 322
V L +LV+ AH Y + +P + + G+L Q P+++ E
Sbjct: 224 PVVLNVPNRLVYSAHDYATSVYPQTWFSDPTF-PNNMPGIWNKNWGYLFNQNIAPVWLGE 282
Query: 323 FGADLRGNNVNDNRYLNCF------FGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGL 376
FG L+ D +L + W W+ + G+
Sbjct: 283 FGTTLQST--TDQTWLKTLVQYLRPTAQYGADSFQWTFWSWNPDS---------GDTGGI 331
Query: 377 FDWNWCDIRNSSFLERISSLQSPFRGP 403
+W + ++ ++S P
Sbjct: 332 LKDDWQTVDT-VKDGYLAPIKSSIFDP 357
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Length = 458 | Back alignment and structure |
|---|
Score = 196 bits (499), Expect = 8e-57
Identities = 78/485 (16%), Positives = 148/485 (30%), Gaps = 90/485 (18%)
Query: 2 GRFISFSFLTSHPLLLLLI-IFPIIIIIQQSKPAIGLPLSTNSRWI-----VDENGHRVK 55
G I L L L + P+ + G+ I +
Sbjct: 3 GNTILKIVLICTILAGLFGQVVPVYAENTTYQTPTGIYYEVRGDTIYMINVTSGEETPIH 62
Query: 56 LACVNWVSH-LEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQ 114
L VNW V GL K+ + + ++ +GFN +RL + +
Sbjct: 63 LFGVNWFGFETPNHVVHGLWKRNWEDMLLQIKSLGFNAIRLPFCTESVKPGT-------- 114
Query: 115 SFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNS 174
+ IG S NP + L ++ + ++ G+ + V+LD H C++
Sbjct: 115 --------QPIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLLDYH----RIGCTHI 162
Query: 175 DGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQN------------ 222
+ + D F+ + +I ++A F NV+G L+NE
Sbjct: 163 EPLWYTED--FSEEDFINTWIEVAKRFGKYWNVIGADLKNEPHSVTSPPAAYTDGTGATW 220
Query: 223 -----VKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTG------ 271
DW + +A+ P L+ + G F + + + G
Sbjct: 221 GMGNPATDWNLAAERIGKAILKVAPHWLIFVEGTQFTNPKTDSSYKWGYNAWWGGNLMAV 280
Query: 272 ----------KLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQ-GWPLFV 320
KLV+ H +G G + D G++ + G+ + +
Sbjct: 281 KDYPVNLPRNKLVYSPHVFGPDVYNQPYFGPAKGFPDNLPDIWYHHFGYVKLELGYSVVI 340
Query: 321 SEFGADL-RGNNVNDNRYLNCFFGVAAELDW-DWALWTLVGSYYLREGVIGLNEYYGLFD 378
EFG G + D + N E + D+ W+ + G+
Sbjct: 341 GEFGGKYGHGGDPRDVIWQNKLVDWMIENKFCDFFYWSWNPDS---------GDTGGILQ 391
Query: 379 WNWCDIRN----------------SSFLERISSLQSPFRGPGVFETGLHKVIYHPATGLC 422
+W I SS + + +P + + ++ A
Sbjct: 392 DDWTTIWEDKYNNLKRLMDSCSKSSSSTQSVIRSTTPTKSNTSKKICGPAILIILAVFSL 451
Query: 423 VQRKS 427
+ R++
Sbjct: 452 LLRRA 456
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Length = 302 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 4e-24
Identities = 49/324 (15%), Positives = 94/324 (29%), Gaps = 76/324 (23%)
Query: 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWP 98
L + + + NG + V+ + P + + G N VR+
Sbjct: 4 LHVKNGRLYEANGQEFIIRGVSHPHNWYPQHTQAF---------ADIKSHGANTVRV--V 52
Query: 99 LYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158
L N PS V V++ N ++
Sbjct: 53 LSNG-----------------------VRWSKNGPSDVA--------NVISLCKQNRLIC 81
Query: 159 ILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218
+L+ H G+ + D W ++ ++ G + V +++ NE G
Sbjct: 82 MLEVH-DTTGYGEQSGAS-----TLDQAVDYW----IELKSVLQGEEDYVLINIGNEPYG 131
Query: 219 PKQN-VKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFT----GKL 273
V W + + AA E +++ N+ +D + + + G
Sbjct: 132 NDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDPTGNT 191
Query: 274 VFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVN 333
VF H YG + + + G PL + EFG ++ +
Sbjct: 192 VFSIHMYGVYSQASTITSYLE---------------HFVNAGLPLIIGEFG----HDHSD 232
Query: 334 DNRYLNCFFGVAAELDWDWALWTL 357
N + A L + W+
Sbjct: 233 GNPDEDTIMAEAERLKLGYIGWSW 256
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Length = 341 | Back alignment and structure |
|---|
Score = 95.0 bits (236), Expect = 2e-21
Identities = 54/368 (14%), Positives = 111/368 (30%), Gaps = 77/368 (20%)
Query: 46 IVDENGHRVKLACVNW--VSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL--TWPLYL 101
+ + H + W + LE + + + FN VR+ L+
Sbjct: 5 KIHHHHHHMNNTIPRWRGFNLLEAFSIKSTGNFKEEDF-LWMAQWDFNFVRIPMCHLLW- 62
Query: 102 ATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILD 161
NP I+ + V+ + + +
Sbjct: 63 --------------------------SDRGNPFIIREDFFEKIDRVIFWGEKYGIHICIS 96
Query: 162 NHISKPGWCCS--NSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRN-VVGMSLRNELRG 218
H PG+ + + + D+ + +I + +A + G+ + + +L NE
Sbjct: 97 LH-RAPGYSVNKEVEEKTNLWKDET-AQEAFIHHWSFIARRYKGISSTHLSFNLINEPPF 154
Query: 219 P---KQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVF 275
P +V+D ++ + +PE L+I+ GL + N V+ V
Sbjct: 155 PDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLGYG-------NIPVDDLTIENTVQ 207
Query: 276 EAHWY---GFTDGQAWVDGNPNQVC---------GRVVDNVMRLSGF-----LLEQGWPL 318
Y T +A + + G + L + L ++G +
Sbjct: 208 SCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIKLRQKGIEV 267
Query: 319 FVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFD 378
F E GA + + ++L + L+ +ALW +G+ D
Sbjct: 268 FCGEMGAYNKTPHDVVLKWLEDLLEIFKTLNIGFALWN-------------FRGPFGILD 314
Query: 379 WNWCDIRN 386
D+
Sbjct: 315 SERKDVEY 322
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Length = 481 | Back alignment and structure |
|---|
Score = 95.8 bits (237), Expect = 4e-21
Identities = 55/385 (14%), Positives = 99/385 (25%), Gaps = 91/385 (23%)
Query: 31 SKPAIGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGF 90
S G + ++ D++G + L N S + +G+ + L++ DMG
Sbjct: 22 SGSGSGSGTALTPSYLKDDDGRSLILRGFNTASSAKSAP-DGMPQFTEADLAREYADMGT 80
Query: 91 NCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVV 148
N VR +W P + D + + V
Sbjct: 81 NFVRFLISWRSV-----------------------------EPAPGVYDQQYLDRVEDRV 111
Query: 149 ASLGNNNVMVILDNHISK----------------------PGWCC----SNSDGNGFFGD 182
V+LD H P W + +
Sbjct: 112 GWYAERGYKVMLDMHQDVYSGAITPEGNSGNGAGAIGNGAPAWATYMDGLPVEPQPRWEL 171
Query: 183 QYFNP--------------------DLWIKGLTKMATIFNGVRNVVGMSLRNE-----LR 217
Y P + + K +A F VV L NE L+
Sbjct: 172 YYIQPGVMRAFDNFWNTTGKHPELVEHYAKAWRAVADRFADNDAVVAYDLMNEPFGGSLQ 231
Query: 218 GPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQA---VNLTFTGKLV 274
GP Q +A+ + + V ++ + ++
Sbjct: 232 GPAFEAGPLAAMYQRTTDAIRQVDQDTWVCVAPQAIGVNQGLPSGLTKIDDPRAGQQRIA 291
Query: 275 FEAHWY-GFTDGQAWVDGNPNQVCGRVVDNVM--RLSGFLLEQGWPLFVSEFGADLRGNN 331
+ H Y D +G + +D + P+ + FG D
Sbjct: 292 YCPHLYPLPLDIGDGHEGLARTLTDVTIDAWRANTAHTARVLGDVPIILGSFGLDT--TL 349
Query: 332 VNDNRYLNCFFGVAAELDWDWALWT 356
Y+ +G A E+ + W+
Sbjct: 350 PGARDYIERVYGTAREMGAGVSYWS 374
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Length = 327 | Back alignment and structure |
|---|
Score = 90.7 bits (225), Expect = 4e-20
Identities = 55/320 (17%), Positives = 106/320 (33%), Gaps = 69/320 (21%)
Query: 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWP 98
LS +V+ +G V+L ++ E ++K + L D G R
Sbjct: 37 LSIKGTQLVNRDGKAVQLKGISSHGL--QWYGEYVNKDSLKWLRD---DWGITVFRA--A 89
Query: 99 LYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158
+Y A + +NPS + + V + + V
Sbjct: 90 MYTADGGYI-----------------------DNPS-----VKNKVKEAVEAAKELGIYV 121
Query: 159 ILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218
I+D HI G+ N + + +M++++ NV+ + NE G
Sbjct: 122 IIDWHILND-------------GNPNQNKEKAKEFFKEMSSLYGNTPNVI-YEIANEPNG 167
Query: 219 PKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAH 278
+D Y + + +P+ ++I+ + +D++ + + +++ H
Sbjct: 168 DVNWKRDIKPYAEEVISVIRKNDPDNIIIVGTGTWSQDVNDAADDQLKDA---NVMYALH 224
Query: 279 WYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGA-DLRGNNVNDNRY 337
+Y T GQ D + L +G P+FV+E+G D GN
Sbjct: 225 FYAGTHGQFLRDKAN----------------YALSKGAPIFVTEWGTSDASGNGGVFLDQ 268
Query: 338 LNCFFGVAAELDWDWALWTL 357
+ W W L
Sbjct: 269 SREWLKYLDSKTISWVNWNL 288
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Length = 320 | Back alignment and structure |
|---|
Score = 89.6 bits (222), Expect = 8e-20
Identities = 47/288 (16%), Positives = 92/288 (31%), Gaps = 57/288 (19%)
Query: 83 KRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPL 140
K + + GF+ VR+ W + I P +D
Sbjct: 48 KIIKERGFDSVRIPIRWSAH---------------------------ISEKYPYEIDKFF 80
Query: 141 IKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATI 200
+ + VV N+++VI++ H D G ++W ++A
Sbjct: 81 LDRVKHVVDVALKNDLVVIINCH--HFEELYQAPDKYG---PVLV--EIW----KQVAQA 129
Query: 201 FNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFV 260
F + + + NE W + NP +VI+ N+
Sbjct: 130 FKDYPDKLFFEIFNEPAQNLTP-TKWNELYPKVLGEIRKTNPSRIVIIDVPNWSNYSYVR 188
Query: 261 RNQAVNLTFTGKLVFEAHWY---GFTDGQA-WVDGNPN---------QVCGRVVDNVMRL 307
+ V+ ++ H+Y FT A WV ++ ++ +
Sbjct: 189 ELKLVDDK---NIIVSFHYYEPFNFTHQGAEWVSPTLPIGVKWEGKDWEVEQIRNHFKYV 245
Query: 308 SGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALW 355
S + + P+F+ EFGA + + + ++ +A E + A W
Sbjct: 246 SEWAKKNNVPIFLGEFGAYSKADMESRVKWTKTVRRIAEEFGFSLAYW 293
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Length = 317 | Back alignment and structure |
|---|
Score = 88.8 bits (220), Expect = 1e-19
Identities = 33/289 (11%), Positives = 89/289 (30%), Gaps = 56/289 (19%)
Query: 83 KRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPL 140
+ + GF+ VR+ W + + P +
Sbjct: 40 DIIKEAGFSHVRIPIRWSTH---------------------------AYAFPPYKIMDRF 72
Query: 141 IKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATI 200
K V+ + V+++ H D + + ++ ++A
Sbjct: 73 FKRVDEVINGALKRGLAVVINIH-----------HYEELMNDPEEHKERFLALWKQIADR 121
Query: 201 FNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFV 260
+ + + N G + W ++ + + + + + +I+ + +
Sbjct: 122 YKDYPETLFFEILNAPHGNL-TPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISAL- 179
Query: 261 RNQAVNLTFTGKLVFEAHWY---GFT-DGQAWVDGN---PNQVCG------RVVDNVMRL 307
+ + + H+Y FT G WV+G+ + G +++ +
Sbjct: 180 -EKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFI 238
Query: 308 SGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWT 356
+ + P+++ EFGA + + + ++ + + W A W
Sbjct: 239 EEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSLAYWE 287
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Length = 306 | Back alignment and structure |
|---|
Score = 82.9 bits (205), Expect = 1e-17
Identities = 53/350 (15%), Positives = 103/350 (29%), Gaps = 75/350 (21%)
Query: 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWP 98
+ + DE+G+ V+L ++ L+ +D L+ D + +RL
Sbjct: 11 VQVCGTQLCDEHGNPVQLRGMSTHGIQW--FDHCLTDSSLDALAY---DWKADIIRL--S 63
Query: 99 LYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158
+Y IQ + ++ + V
Sbjct: 64 MY---------------------------IQEDGYETNPRGFTDRMHQLIDMATARGLYV 96
Query: 159 ILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218
I+D HI PG D ++N D ++A NV + NE G
Sbjct: 97 IVDWHILTPG-------------DPHYNLDRAKTFFAEIAQRHASKTNV-LYEIANEPNG 142
Query: 219 PKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSF----VRNQAVNLTFTGKLV 274
+ Y + + +P+ ++I+ + A N ++
Sbjct: 143 V--SWASIKSYAEEVIPVIRQRDPDSVIIVGTRGWSSLGVSEGSGPAEIAANPVNASNIM 200
Query: 275 FEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLR-GNNVN 333
+ H+Y + + N +R + +P+FV+EFG + G+ N
Sbjct: 201 YAFHFYAASHRDNY-------------LNALR----EASELFPVFVTEFGTETYTGDGAN 243
Query: 334 DNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCD 383
D + + + + AE W W + W
Sbjct: 244 DFQMADRYIDLMAERKIGWTKWNYSDDF---RSGAVFQPGTCASGGPWSG 290
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Length = 364 | Back alignment and structure |
|---|
Score = 83.9 bits (207), Expect = 1e-17
Identities = 50/341 (14%), Positives = 107/341 (31%), Gaps = 66/341 (19%)
Query: 31 SKPAIGLPLSTN-SRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMG 89
S+ + N + E+G V+L ++ E +++ LS D G
Sbjct: 13 SEAGALQLVELNGQLTLAGEDGTPVQLRGMSTHGL--QWFGEIVNENAFVALSN---DWG 67
Query: 90 FNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVA 149
N +RL +Y+ N + + +
Sbjct: 68 SNMIRL--AMYI----------------------------GENGYATNPEVKDLVYEGIE 97
Query: 150 SLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRN--V 207
+++ VI+D H+ PG D + D + ++A +
Sbjct: 98 LAFEHDMYVIVDWHVHAPG------DPRADVYSGAY--DFF----EEIADHYKDHPKNHY 145
Query: 208 VGMSLRNELRGP----------KQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDL 257
+ L NE ++ + Y + E + + ++++ N+ +
Sbjct: 146 IIWELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLRE-KGDNMILVGNPNWSQRP 204
Query: 258 SFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWP 317
A N +++ H+Y + G + + P NVM + L+ G
Sbjct: 205 DLS---ADNPIDAENIMYSVHFYTGSHGASHIGY-PEGTPSSERSNVMANVRYALDNGVA 260
Query: 318 LFVSEFGA-DLRGNNVNDNRYLNCFFGVAAELDWDWALWTL 357
+F +E+G G+ + + + + WA W+L
Sbjct: 261 VFATEWGTSQANGDGGPYFDEADVWLNFLNKHNISWANWSL 301
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Length = 345 | Back alignment and structure |
|---|
Score = 82.7 bits (204), Expect = 2e-17
Identities = 41/325 (12%), Positives = 89/325 (27%), Gaps = 80/325 (24%)
Query: 38 PLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTW 97
+ + D NG + +N K + + G N +R+
Sbjct: 24 GFYVDGNTLYDANGQPFVMKGINH--------GHAWYKDTASTAIPAIAEQGANTIRI-- 73
Query: 98 PLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157
L G + ++ V V+ N ++
Sbjct: 74 VLSDG-----------------------GQWEKDDIDTVR--------EVIELAEQNKMV 102
Query: 158 VILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217
+++ H ++ G D D W +M G + V +++ NE
Sbjct: 103 AVVEVH---------DATGRDSRSDLDRAVDYW----IEMKDALIGKEDTVIINIANE-- 147
Query: 218 GPKQNV--KDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFT---GK 272
+ W + A +++ + + + + ++
Sbjct: 148 -WYGSWDGAAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFNADPLKN 206
Query: 273 LVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNV 332
+F H Y + G A V +++Q L + EFG +V
Sbjct: 207 TIFSIHMYEYAGGDAN--------------TVRSNIDRVIDQDLALVIGEFGHRHTDGDV 252
Query: 333 NDNRYLNCFFGVAAELDWDWALWTL 357
+++ L+ + E W W+
Sbjct: 253 DEDTILS----YSEETGTGWLAWSW 273
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Length = 294 | Back alignment and structure |
|---|
Score = 80.6 bits (199), Expect = 6e-17
Identities = 41/324 (12%), Positives = 92/324 (28%), Gaps = 82/324 (25%)
Query: 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWP 98
S + + D NG + ++H K + + G N +R+
Sbjct: 2 FSVDGNTLYDANGQPFVMR---GINH-----GHAWYKDTASTAIPAIAEQGANTIRI--V 51
Query: 99 LYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158
L G + ++ + V+ N ++
Sbjct: 52 LSDG-----------------------GQWEKDDIDTIR--------EVIELAEQNKMVA 80
Query: 159 ILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218
+++ H ++ G D D W +M G + V +++ NE
Sbjct: 81 VVEVH---------DATGRDSRSDLNRAVDYW----IEMKDALIGKEDTVIINIANE--- 124
Query: 219 PKQNV--KDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFT---GKL 273
+ W + A +++ + + + + ++
Sbjct: 125 WYGSWDGSAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFNADPLKNT 184
Query: 274 VFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVN 333
+F H Y + G A + V +++Q L + EFG +V+
Sbjct: 185 MFSIHMYEYAGGDA--------------NTVRSNIDRVIDQDLALVIGEFGHR--HTDVD 228
Query: 334 DNRYLNCFFGVAAELDWDWALWTL 357
++ L+ + E W W+
Sbjct: 229 EDTILS----YSEETGTGWLAWSW 248
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Length = 376 | Back alignment and structure |
|---|
Score = 80.9 bits (199), Expect = 1e-16
Identities = 48/331 (14%), Positives = 90/331 (27%), Gaps = 63/331 (19%)
Query: 83 KRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPL 140
K ++D FN R+ TW + +D
Sbjct: 69 KVLIDNQFNVFRIPTTWSGH---------------------------FGEAPDYKIDEKW 101
Query: 141 IKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATI 200
+K VV N VIL+ H S + + +W +++A
Sbjct: 102 LKRVHEVVDYPYKNGAFVILNLHHETWNHAFSETLDTA---KEILE-KIW----SQIAEE 153
Query: 201 FNGVRNVVGMSLRNELRGPK-------------QNVKDWYRYMQLGAEAVHAANPEVLVI 247
F + NE R V + NP+ ++
Sbjct: 154 FKDYDEHLIFEGLNEPRKNDTPVEWTGGDQEGWDAVNAMNAVFLKTVRSAGGNNPKRHLM 213
Query: 248 LSGLNFDKDLSFVRNQAVNLTFTGKLVFEAHWY---GFTDGQAWVDGNPNQVCGR--VVD 302
+ + + N + K++ H Y F + G+ +
Sbjct: 214 IPPYAAACNENSF-NNFIFPEDDDKVIASVHAYAPYNFALNNGEGAVDKFDAAGKRDLEW 272
Query: 303 NVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYY 362
N+ + ++QG P+ + E+GA R N + + + + W
Sbjct: 273 NINLMKKRFVDQGIPMILGEYGAMNRDNEEDRATWAEFYMEKVTAMGVPQIWWDNGVFE- 331
Query: 363 LREGVIGLNEYYGLFDWNWCDIRNSSFLERI 393
G E +GL D I + + +
Sbjct: 332 ------GTGERFGLLDRKNLKIVYPTIVAAL 356
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Length = 395 | Back alignment and structure |
|---|
Score = 81.0 bits (199), Expect = 1e-16
Identities = 48/352 (13%), Positives = 101/352 (28%), Gaps = 78/352 (22%)
Query: 83 KRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPL 140
K+V GF +R+ ++ I S ++
Sbjct: 76 KKVKAAGFKSIRIPVSYLNN---------------------------IGSAPNYTINAAW 108
Query: 141 IKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATI 200
+ Q VV N + VI++ H G+Q + + K ++AT
Sbjct: 109 LNRIQQVVDYAYNEGLYVIINIHGD-GYNSVQGGWLLVNGGNQTAIKEKYKKVWQQIATK 167
Query: 201 FNGVRNVVGMSLRNELRGPKQNV------KDWYRYMQLGAEAVHAA---NPEVLVILSGL 251
F+ + + NE+ + Y Q+ + V N +++ G
Sbjct: 168 FSNYNDRLIFESMNEVFDGNYGNPNSAYYTNLNAYNQIFVDTVRQTGGNNNARWLLVPGW 227
Query: 252 NFDKDLSFV----------RNQAVNLTFTGKLVFEAHWY---GFTD---------GQAWV 289
N + D + + + +++ AH+Y F G
Sbjct: 228 NTNIDYTVGNYGFTLPTDNYRSSAIPSSQKRIMISAHYYSPWDFAGEENGNITQWGATST 287
Query: 290 DGNPNQVCG---RVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDN-----RYLNCF 341
+ G + + + QG+P+ + EFG+ + + + N Y
Sbjct: 288 NPAKKSTWGQEDYLESQFKSMYDKFVTQGYPVVIGEFGSIDKTSYDSSNNVYRAAYAKAV 347
Query: 342 FGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLERI 393
A + W + + LF+ + + + + I
Sbjct: 348 TAKAKKYKMVPVYW---------DNGHNGQHGFALFNRSNNTVTQQNIINAI 390
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Length = 303 | Back alignment and structure |
|---|
Score = 79.9 bits (197), Expect = 1e-16
Identities = 54/321 (16%), Positives = 108/321 (33%), Gaps = 70/321 (21%)
Query: 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWP 98
LS ++ +V+E G +V+L ++ + ++ + M L D G N R
Sbjct: 12 LSISNGELVNERGEQVQLKGMSSHGLQW--YGQFVNYESMKWLRD---DWGINVFRA--A 64
Query: 99 LYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158
+Y S+ I D + + + V + + ++ V
Sbjct: 65 MY----------------------------TSSGGYIDDPSVKEKVKEAVEAAIDLDIYV 96
Query: 159 ILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218
I+D H N + D + +M+ ++ NV+ + NE G
Sbjct: 97 IIDWH---------ILSDNDPNIYKEEAKDFF----DEMSELYGDYPNVI-YEIANEPNG 142
Query: 219 PKQN-VKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEA 277
Y + + +P ++I+ + +D+ + + +++
Sbjct: 143 SDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLA---DPNVMYAF 199
Query: 278 HWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGA-DLRGNNVNDNR 336
H+Y T GQ D ++ L +QG +FVSE+G G+
Sbjct: 200 HFYAGTHGQNLRD---------------QVDYAL-DQGAAIFVSEWGTSAATGDGGVFLD 243
Query: 337 YLNCFFGVAAELDWDWALWTL 357
+ E + WA W+L
Sbjct: 244 EAQVWIDFMDERNLSWANWSL 264
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Length = 380 | Back alignment and structure |
|---|
Score = 80.6 bits (198), Expect = 2e-16
Identities = 52/343 (15%), Positives = 94/343 (27%), Gaps = 71/343 (20%)
Query: 83 KRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPL 140
+ GFN VR+ +W + S + +
Sbjct: 68 DAIKQKGFNTVRIPVSWHPH----------------------------VSGSDYKISDVW 99
Query: 141 IKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATI 200
+ Q VV +N + VIL+ H + + +W ++A
Sbjct: 100 MNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYFPSSQYMASSKKYITSVW----AQIAAR 155
Query: 201 FNGVRNVVGMSLRNELR---------------GPKQNVKDWYRYMQLGAEAVHAA---NP 242
F + NE R ++ + Q V A N
Sbjct: 156 FANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNA 215
Query: 243 EVLVILSGLNFDKDLSFVRNQAV---NLTFTGKLVFEAHWYGFTD--GQAWVDGNPNQVC 297
++ G D + + K++ H Y + G A DG N
Sbjct: 216 SRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWN 275
Query: 298 G-------RVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDW 350
V + + +G P+ + E GA + N Y++ + A
Sbjct: 276 INDSKDQSEVTWFMDNIYNKYTSRGIPVIIGECGAVDKNNLKTRVEYMSYYVAQAKARGI 335
Query: 351 DWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLERI 393
LW ++ G E +G FD C + ++ +
Sbjct: 336 LCILWDN-NNFS------GTGELFGFFDRRSCQFKFPEIIDGM 371
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Length = 464 | Back alignment and structure |
|---|
Score = 79.4 bits (195), Expect = 7e-16
Identities = 42/322 (13%), Positives = 93/322 (28%), Gaps = 76/322 (23%)
Query: 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWP 98
+ + D NG+ + +N K + + + G N VR+
Sbjct: 10 FYVSGTTLYDANGNPFVMRGINH--------GHAWYKDQATTAIEGIANTGANTVRI--V 59
Query: 99 LYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158
L G ++ V +++ +NN++
Sbjct: 60 LSDG-----------------------GQWTKDDIQTVR--------NLISLAEDNNLVA 88
Query: 159 ILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218
+L+ H ++ G D W +M + G + V +++ NE G
Sbjct: 89 VLEVH---------DATGYDSIASLNRAVDYW----IEMRSALIGKEDTVIINIANEWFG 135
Query: 219 PKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFT---GKLVF 275
+ W + + A +++ + + + + + +F
Sbjct: 136 S-WDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNADPQRNTMF 194
Query: 276 EAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDN 335
H Y + G A V +L Q L + EFG +V+++
Sbjct: 195 SIHMYEYAGGNAS--------------QVRTNIDRVLNQDLALVIGEFGHRHTNGDVDES 240
Query: 336 RYLNCFFGVAAELDWDWALWTL 357
++ + + W W+
Sbjct: 241 TIMS----YSEQRGVGWLAWSW 258
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Length = 345 | Back alignment and structure |
|---|
Score = 77.7 bits (191), Expect = 9e-16
Identities = 46/330 (13%), Positives = 95/330 (28%), Gaps = 60/330 (18%)
Query: 83 KRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPL 140
++ + GFN +RL TW + + + +D
Sbjct: 49 NKIKEAGFNTLRLPVTWDGH---------------------------MGAAPEYTIDQTW 81
Query: 141 IKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATI 200
+K + + +N++ VI++ + N +W T++A
Sbjct: 82 MKRVEEIANYAFDNDMYVIIN--LHHENEWLKPFYANEAQVKAQLT-KVW----TQIANN 134
Query: 201 FNGVRNVVGMSLRNELR----------GPKQNVKDWYRYMQLGAEAVHAA---NPEVLVI 247
F + + NE R G +N + RY A+ A N ++
Sbjct: 135 FKKYGDHLIFETMNEPRPVGASLQWTGGSYENREVVNRYNLTAVNAIRATGGNNATRYIM 194
Query: 248 LSGLNFDKDLSFVRNQAVNLTFTGKLVFEAHWY---GFT-DGQAWVDGNPNQVCGRVVDN 303
+ L + + N V K++ H Y F D + +
Sbjct: 195 VPTLAASAMSTTI-NDLVIPNNDSKVIVSLHMYSPYFFAMDINGTSSWGSDYDKSSLDSE 253
Query: 304 VMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYYL 363
+ ++ G + + E G+ + N + + A W S
Sbjct: 254 FDAVYNKFVKNGRAVVIGEMGSINKNNTAARVTHAEYYAKSAKARGLTPIWWDNGYSVA- 312
Query: 364 REGVIGLNEYYGLFDWNWCDIRNSSFLERI 393
G E +G+F+ + ++
Sbjct: 313 -----GKAETFGIFNRSNLTWDAPEVMKAF 337
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Length = 343 | Back alignment and structure |
|---|
Score = 75.0 bits (184), Expect = 8e-15
Identities = 40/312 (12%), Positives = 89/312 (28%), Gaps = 70/312 (22%)
Query: 83 KRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIK 142
+ + + GF+ VRL + + +D +N +
Sbjct: 35 ETIAEAGFDHVRLPFDYPIIESD-------------------------DNVGEYKEDGLS 69
Query: 143 AFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFN 202
+ N+ ++LD H PG+ + + F D ++ +A +
Sbjct: 70 YIDRCLEWCKKYNLGLVLDMH-HAPGYRFQDFKTSTLFEDPN-QQKRFVDIWRFLAKRYI 127
Query: 203 GVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRN 262
R + L N++ P + W + M +A+ + + + + G N++
Sbjct: 128 NEREHIAFELLNQVVEP--DSTRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDEL--- 182
Query: 263 QAVNLTFTGKLVFEAHWY---GFT-DGQAWVDGNPNQVCGRVVDNVM------------- 305
+ + +V+ H+Y FT W +
Sbjct: 183 KNLADIDDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKY 242
Query: 306 ---------------------RLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGV 344
F ++ L+ EFG + + ++ + +
Sbjct: 243 SFMMELNNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGVIAIADLESRIKWHEDYISL 302
Query: 345 AAELDWDWALWT 356
E D A+W
Sbjct: 303 LEEYDIGGAVWN 314
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Length = 293 | Back alignment and structure |
|---|
Score = 72.2 bits (177), Expect = 4e-14
Identities = 42/322 (13%), Positives = 96/322 (29%), Gaps = 69/322 (21%)
Query: 38 PLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGL-SKQPMDMLSKRVVDMGFNCVRLT 96
L+ + I+ G A + AE + + + + +R
Sbjct: 4 KLTVSGNQILA-GGENTSFAGPSLFWSNTGWGAEKFYTAETVAKAKT---EFNATLIRA- 58
Query: 97 WPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156
+ G + + + VV + ++
Sbjct: 59 -AIG------------------------HGTSTGGSLNFDWEGNMSRLDTVVNAAIAEDM 93
Query: 157 MVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNEL 216
VI+D H + + + ++ +AT + NV+ + NE
Sbjct: 94 YVIIDFHS----------------HEAHTDQATAVRFFEDVATKYGQYDNVI-YEIYNEP 136
Query: 217 RGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFE 276
D Y + + + A +P+ L+++ + +D+ ++ + +
Sbjct: 137 LQISWV-NDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVDVASQNPIDRAN---IAYT 192
Query: 277 AHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGA-DLRGNNVNDN 335
H+Y T GQ++ + + L+ G LF +E+G + GN +
Sbjct: 193 LHFYAGTHGQSYRNK----------------AQTALDNGIALFATEWGTVNADGNGGVNI 236
Query: 336 RYLNCFFGVAAELDWDWALWTL 357
+ + + A W L
Sbjct: 237 NETDAWMAFFKTNNISHANWAL 258
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Length = 305 | Back alignment and structure |
|---|
Score = 71.2 bits (174), Expect = 1e-13
Identities = 33/279 (11%), Positives = 73/279 (26%), Gaps = 50/279 (17%)
Query: 83 KRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIK 142
++ G N R+ + + +S D +
Sbjct: 38 DTLISKGMNIFRVPFMMERLVPNS-------------------------MTGSPDPNYLA 72
Query: 143 AFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFN 202
A V ++ ++D H + + W +A+ F
Sbjct: 73 DLIATVNAITQKGAYAVVDPH-----NYGRYYNSIISSPSDF--ETFW----KTVASQFA 121
Query: 203 GVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAAN-PEVLVILSGLNFDKDLSFVR 261
V+ NE Q Q + + +A + + G ++ ++
Sbjct: 122 SNPLVI-FDTDNEYHDMDQT--LVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTWTN 178
Query: 262 NQAVNLTFT---GKLVFEAHWYGFTDGQ-AWVDGNPNQVCGRVVDNVMRLSGFLLEQGWP 317
+ T K+++E H Y +DG + + + + + +L G
Sbjct: 179 VNDNMKSLTDPSDKIIYEMHQYLDSDGSGTSATCVSSTI---GQERITSATQWLRANGKK 235
Query: 318 LFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWT 356
+ EF G + + A+ W
Sbjct: 236 GIIGEFAG---GADNVCETAITGMLDYMAQNTDVWTGAI 271
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Length = 340 | Back alignment and structure |
|---|
Score = 70.8 bits (173), Expect = 2e-13
Identities = 41/282 (14%), Positives = 82/282 (29%), Gaps = 51/282 (18%)
Query: 85 VVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIK 142
V + G RL W + +N +D I
Sbjct: 52 VNEDGMTIFRLPVGWQYL---------------------------VNNNLGGNLDSTSIS 84
Query: 143 AFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFN 202
+ +V + I+D H G G + F LW +++A+ +
Sbjct: 85 KYDQLVQGCLSLGAYCIVDIH--NYARWNGGIIGQGGPTNAQFT-SLW----SQLASKYA 137
Query: 203 GVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPE-VLVILSGLNFDKDLSFVR 261
V + NE N W +Q A+ A + L G ++ +F+
Sbjct: 138 SQSRVW-FGIMNEPHDVNIN--TWAATVQEVVTAIRNAGATSQFISLPGNDWQSAGAFIS 194
Query: 262 NQAVN--------LTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLE 313
+ + T L+F+ H Y +D + + L+ +L +
Sbjct: 195 DGSAAALSQVTNPDGSTTNLIFDVHKYLDSDNSG---THAECTTNNIDGAFSPLATWLRQ 251
Query: 314 QGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALW 355
++E G + + D + +++ + W
Sbjct: 252 NNRQAILTETGGGNVQSCIQDMCQQIQYLNQNSDVYLGYVGW 293
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Length = 291 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 8e-12
Identities = 53/349 (15%), Positives = 102/349 (29%), Gaps = 83/349 (23%)
Query: 38 PLSTNSRWIVDENGHRVKLACVNWVSH-LEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLT 96
PLS N I A + + + + L K D + VR
Sbjct: 4 PLSVNGNKIYA-GEKAKSFAGNSLFWSNNGWGGEKFYTADTVASLKK---DWKSSIVRA- 58
Query: 97 WPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKA-FQAVVASLGNNN 155
+ +Q + + D KA + VV + N+
Sbjct: 59 -AMG---------------------------VQESGGYLQDPAGNKAKVERVVDAAIAND 90
Query: 156 VMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNE 215
+ I+ H N I+ +MA + NV+ + NE
Sbjct: 91 MYAIIGWHSHSA----------------ENNRSEAIRFFQEMARKYGNKPNVI-YEIYNE 133
Query: 216 LRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVF 275
+ Y + A+ A +P+ L+I+ ++ +++ +N + +
Sbjct: 134 PLQVSWS-NTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPIN---AKNIAY 189
Query: 276 EAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGA-DLRGNNVND 334
H+Y T G++ + L G LFV+E+G + GN +
Sbjct: 190 TLHFYAGTHGESLRNKA----------------RQALNNGIALFVTEWGTVNADGNGGVN 233
Query: 335 NRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCD 383
+ + + + A W L NE + + +
Sbjct: 234 QTETDAWVTFMRDNNISNANWALNDK----------NEGASTYYPDSKN 272
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.4 bits (148), Expect = 5e-10
Identities = 88/615 (14%), Positives = 162/615 (26%), Gaps = 189/615 (30%)
Query: 47 VDENGHRVKLACVNWVSHLEPVVAEGLS-KQPMDM----LSKRVVDMGFN-------CVR 94
+D + + +S E + K DM LSK +D +R
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66
Query: 95 LTWPLYLATNDSLASLTVRQSFQK--LGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLG 152
L W L L+ + + V + + L+ I + PS++ + + L
Sbjct: 67 LFWTL-LSKQEEMVQKFVEEVLRINYKFLMSPIK-TEQRQPSMMT----RMYIEQRDRLY 120
Query: 153 NNNVMVILDNHISKP---------------------------G-WC-----CSNSDGNGF 179
N+N V ++S+ G C +
Sbjct: 121 NDNQ-VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCK 179
Query: 180 FGDQYF--------NPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQ 231
+ F +P+ ++ L K+ + N ++ +++ R +
Sbjct: 180 MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN-IKLRIHSIQAELRRLL 238
Query: 232 LGAEAVHAANPEVLVILSGLN-------FD---KDLSFVRNQAV----NLTFTGKLVFEA 277
L++L + F+ K L R + V + T + +
Sbjct: 239 K-----SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293
Query: 278 HWYGFTDGQA------WVDGN----PNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADL 327
H T + ++D P +V P +S +
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVL----------------TTNPRRLSIIAESI 337
Query: 328 R-GNNVNDN-RYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYY---GLFDWN-- 380
R G DN +++NC L T++ S + + +F +
Sbjct: 338 RDGLATWDNWKHVNC-----------DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386
Query: 381 ---------WCDI------------RNSSFLER--------ISSLQSPFRGPGVFETGLH 411
W D+ S +E+ I S+ + E LH
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH 446
Query: 412 KVI---YHPATGLCVQRKSFLDPLT-----------LGPCTESEAWSYTPHKTISLKGAY 457
+ I Y+ + P L E + + +
Sbjct: 447 RSIVDHYNIPKTFD--SDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFR--- 501
Query: 458 FCLQAK--HVGKPAKLGIICTDCGSTWEIISDSKMHLSSKADNGTTVCLDVDSSNTIVTN 515
F L+ K H GS + K + DN V N I+
Sbjct: 502 F-LEQKIRHDSTA------WNASGSILNTLQQLKFYKPYICDNDPKYERLV---NAILDF 551
Query: 516 TCKC---LSRDKTCD 527
K L K D
Sbjct: 552 LPKIEENLICSKYTD 566
|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Length = 399 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 7e-06
Identities = 45/285 (15%), Positives = 84/285 (29%), Gaps = 47/285 (16%)
Query: 83 KRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIK 142
K++ ++G N VR+ Y A V+ Q L
Sbjct: 80 KQISNLGLNFVRIPIG-YWAFQLLDNDPYVQGQVQYL----------------------- 115
Query: 143 AFQAVVASLGNNNVMVILDNHISKPG----WCCSNSDGNGFFGDQYFNPDLWIKGLTKMA 198
+ + NN+ V +D H PG + S + F + N + + L +
Sbjct: 116 --EKALGWARKNNIRVWIDLH-GAPGSQNGFDNSGLRDSYNFQNGD-NTQVTLNVLNTIF 171
Query: 199 TIFNGVRN---VVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDK 255
+ G V+G+ L NE GP N+ ++ G ++ VI+
Sbjct: 172 KKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAAQ-- 229
Query: 256 DLSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQG 315
+ N +V + H Y G + N N + ++
Sbjct: 230 VFGYWNNFLTVAEGQWNVVVDHHHYQVFSGG-ELSRNIND----HISVACNWGWDAKKES 284
Query: 316 WPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGS 360
+ + ++LN A + + +GS
Sbjct: 285 HWNVAGSW----SAALTDCAKWLN-GVNRGARYEGAYDNAPYIGS 324
|
| >3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae} Length = 197 | Back alignment and structure |
|---|
Score = 41.2 bits (96), Expect = 3e-04
Identities = 12/61 (19%), Positives = 18/61 (29%), Gaps = 20/61 (32%)
Query: 473 IICTDCGS-TWEIISDSKMHLSSKADNGTTVCLDVDSSNTIVTNTCKCLSRDKTCDPASQ 531
+ C +C +I+ G VC C + DK D S+
Sbjct: 22 LTCPECKVYPPKIVERF--------SEGDVVCAL-----------CGLVLSDKLVDTRSE 62
Query: 532 W 532
W
Sbjct: 63 W 63
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Length = 408 | Back alignment and structure |
|---|
Score = 41.0 bits (95), Expect = 7e-04
Identities = 47/287 (16%), Positives = 80/287 (27%), Gaps = 44/287 (15%)
Query: 83 KRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIK 142
+ GFN VR+ + L
Sbjct: 80 ANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYL----------------------- 116
Query: 143 AFQAVVASLGNNNVMVILDNHI---SKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMAT 199
+ NN++ V +D H S+ G+ S + F + N + I L +
Sbjct: 117 --DQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDS-NLAVTINVLNYILK 173
Query: 200 IFNG---VRNVVGMSLRNELRGPKQNVKD-WYRYMQLGAEAVHAANPEVLVILSGLNFDK 255
++ + V+G+ L NE GP ++ Y+ E + VI+ F
Sbjct: 174 KYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQP 233
Query: 256 DLSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQG 315
+ N + G + + H Y Q + + + +L +
Sbjct: 234 YNYWDDFMTENDGYWG-VTIDHHHY-----QVFASDQLERSIDEHIKVACEWGTGVLNES 287
Query: 316 WPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYY 362
+ EF A L D G A D W SY
Sbjct: 288 HWIVCGEFAAAL-----TDCIKWLNSVGFGARYDGSWVNGDQTSSYI 329
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 570 | |||
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 100.0 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 100.0 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 100.0 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 100.0 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 100.0 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 100.0 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 100.0 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 100.0 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 100.0 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 100.0 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 100.0 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 100.0 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 100.0 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 100.0 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 100.0 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 100.0 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 100.0 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 100.0 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 100.0 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 100.0 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 100.0 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 100.0 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 100.0 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 100.0 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 100.0 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 100.0 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 100.0 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 100.0 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 99.98 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 99.97 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 99.96 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 99.95 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 99.95 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 99.95 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 99.94 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 99.94 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 99.85 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 99.76 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 99.74 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 99.68 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 99.56 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 99.53 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 99.53 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 99.5 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 99.46 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 99.4 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 99.39 | |
| 2j78_A | 468 | Beta-glucosidase A; family 1, hydrolase, inhibitor | 99.37 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 99.37 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 99.36 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 99.34 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 99.34 | |
| 1uhv_A | 500 | Beta-xylosidase; family 39 glycoside hydrolase, xy | 99.3 | |
| 3fj0_A | 465 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase | 99.28 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 99.27 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 99.19 | |
| 1ug6_A | 431 | Beta-glycosidase; glucosidase, atomic resolution, | 99.19 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 99.18 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 99.17 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 99.15 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 99.15 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 99.14 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 99.12 | |
| 3ahx_A | 453 | Beta-glucosidase A; cellulases, glycosyl hydrolase | 99.12 | |
| 2dry_A | 130 | 29-kDa galactose-binding lectin; earthworm lumbric | 99.11 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 99.11 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 99.1 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 99.05 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 99.04 | |
| 3kzs_A | 463 | Glycosyl hydrolase family 5; structural genomics, | 99.04 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 99.03 | |
| 3apg_A | 473 | Beta-glucosidase; TIM barrel, hydrolase, sugar bin | 99.02 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 99.02 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 99.0 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 99.0 | |
| 1qvb_A | 481 | Beta-glycosidase; TIM-barrel, thermostable, hydrol | 98.97 | |
| 2xhy_A | 479 | BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, | 98.95 | |
| 3a07_A | 118 | Actinohivin; carbohydrate-binding module family 13 | 98.94 | |
| 4hz8_A | 444 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba | 98.93 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 98.88 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 98.88 | |
| 1qox_A | 449 | Beta-glucosidase; hydrolase, cellulose degradation | 98.88 | |
| 1e4i_A | 447 | Beta-glucosidase; hydrolase, family 1 glycosyl hyd | 98.87 | |
| 2o9p_A | 454 | Beta-glucosidase B; family 1 glycoside hydrolase; | 98.86 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 98.83 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 98.79 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 98.78 | |
| 1gnx_A | 479 | Beta-glucosidase; hydrolase, glycosyltransferase, | 98.76 | |
| 3ta9_A | 458 | Glycoside hydrolase family 1; TIM barrel, glucosid | 98.76 | |
| 2ao3_A | 130 | 29-kDa galactose-binding lectin; earthworm lumbric | 98.75 | |
| 2vzs_A | 1032 | CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, | 98.74 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 98.73 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 98.73 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 98.67 | |
| 1knl_A | 130 | Endo-1,4-beta-xylanase A; carbohydrate binding mod | 98.65 | |
| 1pbg_A | 468 | PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g | 98.64 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 98.6 | |
| 3pg0_A | 165 | Threefoil; symmetric design, beta-trefoil, enginee | 98.53 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 98.51 | |
| 1v08_A | 512 | Beta-glucosidase; glycoside hydrolase, dimboa-gluc | 98.45 | |
| 3phz_A | 286 | Ricin B-related lectin; beta trefoil, saccharide b | 98.44 | |
| 2d7i_A | 570 | Polypeptide N-acetylgalactosaminyltransferase 10; | 98.42 | |
| 2e9l_A | 469 | Cytosolic beta-glucosidase; novel cytosolic neutra | 98.4 | |
| 3c9z_A | 258 | Agglutinin II, SNA-II; beta-trefoil, ricin-B domai | 98.4 | |
| 2aai_B | 262 | Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG | 98.37 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 98.35 | |
| 1wcg_A | 464 | Thioglucosidase, myrosinase; aphid, beta-glucosida | 98.35 | |
| 4ha4_A | 489 | Beta-galactosidase; TIM barrel, beta-glycosidase, | 98.34 | |
| 1abr_B | 267 | Abrin-A; glycosidase/carbohydrate complex, lectin, | 98.34 | |
| 1uwi_A | 489 | Beta-galactosidase; hydrolase, beta-glycosidase, g | 98.31 | |
| 2dga_A | 565 | Beta-glucosidase; alpha/beta barrel, hydrolase; 1. | 98.3 | |
| 1cbg_A | 490 | Cyanogenic beta-glucosidase; hydrolase (O-glycosyl | 98.28 | |
| 3ef2_A | 293 | Agglutinin, lectin; beta-trefoil, calcium-binding, | 98.28 | |
| 1ggp_B | 254 | TKL-1, protein (lectin 1 B chain); sugar binding p | 98.27 | |
| 1e4m_M | 501 | Myrosinase MA1; hydrolase, family 1 glycosyl hydro | 98.26 | |
| 1v02_A | 565 | Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri | 98.26 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 98.25 | |
| 3f5l_A | 481 | Beta-glucosidase; beta-alpha-barrels, glycosidase, | 98.25 | |
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 98.25 | |
| 2e3z_A | 465 | Beta-glucosidase; TIM barrel, glycoside hydrolase | 98.25 | |
| 2w5f_A | 540 | Endo-1,4-beta-xylanase Y; cellulosome, glycosidase | 98.24 | |
| 3gnp_A | 488 | OS03G0212800 protein; beta-alpha barrel, glycosida | 98.23 | |
| 4b3l_A | 479 | Beta-glucosidase; hydrolase, glycosidase, carbohyd | 98.23 | |
| 1vcl_A | 432 | Hemolytic lectin CEL-III; hemolysis, hemagglutinat | 98.21 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 98.21 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 98.19 | |
| 1m2t_B | 263 | Mistletoe lectin I B chain; ribosome inactivation, | 98.19 | |
| 2jf7_A | 532 | Strictosidine-O-beta-D-glucosidase; alkaloid, hydr | 98.18 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 98.14 | |
| 3a21_A | 614 | Putative secreted alpha-galactosidase; beta-alpha- | 98.13 | |
| 3c9z_A | 258 | Agglutinin II, SNA-II; beta-trefoil, ricin-B domai | 98.12 | |
| 3ahy_A | 473 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 98.08 | |
| 2aai_B | 262 | Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG | 98.06 | |
| 1m2t_B | 263 | Mistletoe lectin I B chain; ribosome inactivation, | 98.05 | |
| 1vcl_A | 432 | Hemolytic lectin CEL-III; hemolysis, hemagglutinat | 98.05 | |
| 1qw9_A | 502 | Arabinosidase, alpha-L-arabinofuranosidase; hydrol | 98.05 | |
| 3qom_A | 481 | 6-phospho-beta-glucosidase; structural genomics, P | 98.04 | |
| 1ggp_B | 254 | TKL-1, protein (lectin 1 B chain); sugar binding p | 98.03 | |
| 2vlc_A | 570 | Cinnamomin, type 2 ribosome-inactivating protein c | 98.02 | |
| 3vii_A | 487 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 97.99 | |
| 2ffu_A | 501 | Ppgalnact-2, polypeptide N-acetylgalactosaminyltra | 97.99 | |
| 4atd_A | 513 | Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr | 97.94 | |
| 3ur8_A | 323 | Glucan endo-1,3-beta-D-glucosidase; glucoside hydr | 97.93 | |
| 2c7f_A | 513 | Alpha-L-arabinofuranosidase; glycosidase, xylan, a | 97.92 | |
| 3aj6_A | 286 | Main hemagglutinin component; toxin, beta-trefoil; | 97.91 | |
| 3nbc_A | 148 | Ricin B-like lectin; lactose, sugar BIND protein; | 97.9 | |
| 3ptm_A | 505 | Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly | 97.9 | |
| 4dde_A | 480 | 6-phospho-beta-glucosidase; structural genomics, P | 97.88 | |
| 3a07_A | 118 | Actinohivin; carbohydrate-binding module family 13 | 97.85 | |
| 2vlc_A | 570 | Cinnamomin, type 2 ribosome-inactivating protein c | 97.82 | |
| 1abr_B | 267 | Abrin-A; glycosidase/carbohydrate complex, lectin, | 97.79 | |
| 1aq0_A | 306 | 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl | 97.7 | |
| 3clw_A | 507 | Conserved exported protein; structural genomics, u | 97.62 | |
| 4a3y_A | 540 | Raucaffricine-O-beta-D-glucosidase; hydrolase, alk | 97.6 | |
| 3vny_A | 488 | Beta-glucuronidase; TIM barrel, greek-KEY, glycosi | 97.57 | |
| 2cyg_A | 312 | Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be | 97.56 | |
| 2y24_A | 383 | Xylanase; hydrolase, GH5 family, aldotetraouronic | 97.55 | |
| 1ybi_A | 288 | HA33A, HA33/A, non-toxin haemagglutinin HA34; beta | 97.52 | |
| 3gyc_A | 393 | Putative glycoside hydrolase; YP_001304622.1, stru | 97.51 | |
| 1knl_A | 130 | Endo-1,4-beta-xylanase A; carbohydrate binding mod | 97.51 | |
| 4aw7_A | 591 | GH86A beta-porphyranase; hydrolase, porphyran-hexa | 97.5 | |
| 3pg0_A | 165 | Threefoil; symmetric design, beta-trefoil, enginee | 97.48 | |
| 2dry_A | 130 | 29-kDa galactose-binding lectin; earthworm lumbric | 97.48 | |
| 2y2w_A | 574 | Arabinofuranosidase; hydrolase, arabinoxylan, glyc | 97.41 | |
| 3ro8_A | 341 | Endo-1,4-beta-xylanase; glycosyl hydrolase family | 97.4 | |
| 1ghs_A | 306 | 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg | 97.38 | |
| 3ug3_A | 504 | Alpha-L-arabinofuranosidase; TIM barrel, hydrolase | 97.34 | |
| 2ao3_A | 130 | 29-kDa galactose-binding lectin; earthworm lumbric | 97.34 | |
| 2vse_A | 841 | MTX holotoxin, mosquitocidal toxin; ADP-ribosyltra | 97.2 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 97.08 | |
| 2d7i_A | 570 | Polypeptide N-acetylgalactosaminyltransferase 10; | 97.07 | |
| 3em5_A | 316 | Beta-1,3-glucanase; glycoprotein, rossmann fold, ( | 97.06 | |
| 2wnw_A | 447 | Activated by transcription factor SSRB; hydrolase, | 96.98 | |
| 3tp4_A | 475 | Computational design of enzyme; structural genomic | 96.9 | |
| 4h41_A | 340 | Putative alpha-L-fucosidase; hydrolase, carbohydra | 96.9 | |
| 3aj6_A | 286 | Main hemagglutinin component; toxin, beta-trefoil; | 96.89 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 96.87 | |
| 2vrq_A | 496 | Alpha-L-arabinofuranosidase; hydrolase, glycosidas | 96.85 | |
| 2vse_A | 841 | MTX holotoxin, mosquitocidal toxin; ADP-ribosyltra | 96.83 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 96.7 | |
| 2v3g_A | 283 | Endoglucanase H; beta-1 4 beta-1 3 glucanase, lich | 96.66 | |
| 3phz_A | 286 | Ricin B-related lectin; beta trefoil, saccharide b | 96.62 | |
| 2nt0_A | 497 | Glucosylceramidase; cerezyme, glucocerebrosidase, | 96.4 | |
| 3ef2_A | 293 | Agglutinin, lectin; beta-trefoil, calcium-binding, | 96.31 | |
| 3ik2_A | 517 | Endoglucanase A; TIM-like barrel, hydrolase; 2.20A | 96.28 | |
| 3zr5_A | 656 | Galactocerebrosidase; hydrolase, GALC, glycosyl hy | 96.19 | |
| 2vx5_A | 396 | Cellvibrio japonicus mannanase cjman26C; hydrolase | 96.04 | |
| 2ffu_A | 501 | Ppgalnact-2, polypeptide N-acetylgalactosaminyltra | 95.95 | |
| 3a21_A | 614 | Putative secreted alpha-galactosidase; beta-alpha- | 95.94 | |
| 1ybi_A | 288 | HA33A, HA33/A, non-toxin haemagglutinin HA34; beta | 95.9 | |
| 2yih_A | 524 | CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca | 95.74 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 95.5 | |
| 1odz_A | 386 | Mannanase A; hydrolase, family 26, glycoside-hydro | 95.33 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 95.13 | |
| 3kl0_A | 401 | Glucuronoxylanase XYNC; alpha beta barrel, (beta/a | 94.8 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 94.67 | |
| 1m7x_A | 617 | 1,4-alpha-glucan branching enzyme; alpha/beta barr | 94.26 | |
| 4gqr_A | 496 | Pancreatic alpha-amylase; glycosyl hydrolase, diab | 94.14 | |
| 2dh2_A | 424 | 4F2 cell-surface antigen heavy chain; TIM-barrel, | 94.12 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 94.09 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 94.08 | |
| 1sr4_A | 206 | CDT A, cytolethal distending toxin subunit A; bact | 93.89 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 93.74 | |
| 3nbc_A | 148 | Ricin B-like lectin; lactose, sugar BIND protein; | 93.64 | |
| 3ii1_A | 535 | Cellulase; CELM2, glucanase-xyanase, glucanase, xy | 93.16 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 93.14 | |
| 4aie_A | 549 | Glucan 1,6-alpha-glucosidase; hydrolase, glycoside | 92.99 | |
| 1gcy_A | 527 | Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b | 92.98 | |
| 2wan_A | 921 | Pullulanase; hydrolase, glycoside hydrolase, polys | 92.76 | |
| 1ht6_A | 405 | AMY1, alpha-amylase isozyme 1; barley, beta-alpha- | 92.7 | |
| 3faw_A | 877 | Reticulocyte binding protein; TIM barrel, beta bar | 92.57 | |
| 1dqg_A | 135 | Mannose receptor; beta trefoil, multilectin recept | 92.46 | |
| 1hvx_A | 515 | Alpha-amylase; hydrolase, glycosyltransferase, the | 92.01 | |
| 1g94_A | 448 | Alpha-amylase; beta-alpha-8-barrel, 3 domain struc | 91.86 | |
| 3bh4_A | 483 | Alpha-amylase; calcium, carbohydrate metabolism, g | 90.99 | |
| 2guy_A | 478 | Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; | 90.75 | |
| 1zja_A | 557 | Trehalulose synthase; sucrose isomerase, alpha-amy | 90.65 | |
| 1lwj_A | 441 | 4-alpha-glucanotransferase; alpha-amylase family, | 90.52 | |
| 3ttq_A | 1108 | Dextransucrase; (beta/alpha)8 barrel, transferase; | 90.46 | |
| 1ud2_A | 480 | Amylase, alpha-amylase; calcium-free, alkaline, hy | 90.29 | |
| 2ddx_A | 333 | Beta-1,3-xylanase; glycoside hydrolase, TIM barrel | 90.17 | |
| 2aaa_A | 484 | Alpha-amylase; glycosidase; 2.10A {Aspergillus nig | 90.05 | |
| 2e8y_A | 718 | AMYX protein, pullulanase; multiple domain, beta-a | 89.9 | |
| 2zic_A | 543 | Dextran glucosidase; TIM barrel, (beta/alpha)8-bar | 89.75 | |
| 4aef_A | 645 | Neopullulanase (alpha-amylase II); hydrolase, ther | 89.72 | |
| 2ze0_A | 555 | Alpha-glucosidase; TIM barrel, glucoside hydrolase | 89.58 | |
| 1m53_A | 570 | Isomaltulose synthase; klebsiella SP. LX3, sucrose | 89.5 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 89.35 | |
| 2wc7_A | 488 | Alpha amylase, catalytic region; CD/PUL-hydrolyzin | 89.34 | |
| 1jae_A | 471 | Alpha-amylase; glycosidase, carbohydrate metabolis | 89.0 | |
| 1uok_A | 558 | Oligo-1,6-glucosidase; sugar degradation, hydrolas | 88.89 | |
| 1wpc_A | 485 | Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr | 88.62 | |
| 3aj7_A | 589 | Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro | 88.44 | |
| 1mxg_A | 435 | Alpha amylase; hyperthermostable, family 13 glycos | 88.4 | |
| 2bhu_A | 602 | Maltooligosyltrehalose trehalohydrolase; alpha-amy | 88.16 | |
| 3czg_A | 644 | Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; | 87.81 | |
| 1g5a_A | 628 | Amylosucrase; glycosyltransferase, glycoside hydro | 87.76 | |
| 1qho_A | 686 | Alpha-amylase; glycoside hydrolase, starch degrada | 87.01 | |
| 1dqg_A | 135 | Mannose receptor; beta trefoil, multilectin recept | 86.97 | |
| 3vgf_A | 558 | Malto-oligosyltrehalose trehalohydrolase; alpha/be | 86.45 | |
| 3aie_A | 844 | Glucosyltransferase-SI; beta-alpha-barrels; HET: M | 85.74 | |
| 2p10_A | 286 | MLL9387 protein; putative phosphonopyruvate hydrol | 85.72 | |
| 1gjw_A | 637 | Maltodextrin glycosyltransferase; alpha-amylase, m | 85.46 | |
| 1xez_A | 721 | Hemolysin, cytolysin; pore-forming toxin, Pro-toxi | 85.03 | |
| 4aee_A | 696 | Alpha amylase, catalytic region; hydrolase, hypert | 85.01 | |
| 2vr5_A | 718 | Glycogen operon protein GLGX; hydrolase, glycosida | 84.84 | |
| 1bf2_A | 750 | Isoamylase; hydrolase, glycosidase, debranching en | 84.44 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 84.4 | |
| 1d3c_A | 686 | Cyclodextrin glycosyltransferase; alpha-amylase, p | 84.08 | |
| 2wsk_A | 657 | Glycogen debranching enzyme; carbohydrate metaboli | 83.97 | |
| 3k8k_A | 669 | Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet | 83.96 | |
| 1cyg_A | 680 | Cyclodextrin glucanotransferase; glycosyltransfera | 83.94 | |
| 1wza_A | 488 | Alpha-amylase A; hydrolase, halophilic, thermophil | 83.76 | |
| 3bmv_A | 683 | Cyclomaltodextrin glucanotransferase; glycosidase, | 82.69 | |
| 2ya0_A | 714 | Putative alkaline amylopullulanase; hydrolase, gly | 82.61 | |
| 3m07_A | 618 | Putative alpha amylase; IDP00968, csgid, structura | 82.44 | |
| 3aml_A | 755 | OS06G0726400 protein; starch-branching, transferas | 82.3 | |
| 3bc9_A | 599 | AMYB, alpha amylase, catalytic region; acarbose, t | 81.27 | |
| 1ji1_A | 637 | Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 | 80.27 | |
| 1iv8_A | 720 | Maltooligosyl trehalose synthase; beta alpha barre | 80.05 |
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-59 Score=505.77 Aligned_cols=332 Identities=21% Similarity=0.353 Sum_probs=283.4
Q ss_pred CCCCCCeEecCCeEEc---CCC--CEEEEEEeeCCCCCC-ccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCc
Q 008330 33 PAIGLPLSTNSRWIVD---ENG--HRVKLACVNWVSHLE-PVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDS 106 (570)
Q Consensus 33 ~~~~~~L~t~G~~IVd---~~G--~~v~L~GVNw~g~~~-~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~ 106 (570)
..+.++|+|+|++||| ++| ++|+|+||||+|++. ..+++|+|.++++++++.|+++|||+||||++++.+.+..
T Consensus 35 ~~~~~~l~v~G~~iv~~~~~~G~~~~v~l~GVN~~G~e~~~~~~~Gl~~~~~~~~i~~ik~~G~N~VRipi~~~~l~~~~ 114 (458)
T 3qho_A 35 TPTGIYYEVRGDTIYMINVTSGEETPIHLFGVNWFGFETPNHVVHGLWKRNWEDMLLQIKSLGFNAIRLPFCTESVKPGT 114 (458)
T ss_dssp CSSSEEEEEETTEEEEEETTTCCEEECCCEEEECCCTTSTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEETGGGSTTC
T ss_pred CCCCCeEEEECCEEEEecCCCCCcceEEEEEEecCcccccccccCCCCCCCHHHHHHHHHHcCCCEEEEeeeHHHhCCCC
Confidence 4467889999999999 488 999999999999985 6789999999999999999999999999999998776421
Q ss_pred cccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCC
Q 008330 107 LASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFN 186 (570)
Q Consensus 107 ~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~ 186 (570)
. + ....+..||.+.+.+.++.||++|++|.++|||||||+|...+. . ....|+.+. +.
T Consensus 115 ~---p-------------~~~~~~~np~~~~~~~l~~ld~vV~~a~~~Gi~VIldlH~~~~~----~-~~~~W~~~~-~~ 172 (458)
T 3qho_A 115 Q---P-------------IGIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLLDYHRIGCT----H-IEPLWYTED-FS 172 (458)
T ss_dssp C---C-------------CCCCTTTCGGGTTCCHHHHHHHHHHHHHHTTCEEEEEEEESSSS----S-CCSSSCBTT-BC
T ss_pred C---c-------------cccccccCccccchHHHHHHHHHHHHHHHCCCEEEEecccCCCc----c-CCCccCCch-hh
Confidence 0 0 01124568888888999999999999999999999999997532 1 122454443 57
Q ss_pred HHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCC-----------------CChhHHHHHHHHHHHHHHhcCCCcEEEEe
Q 008330 187 PDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPK-----------------QNVKDWYRYMQLGAEAVHAANPEVLVILS 249 (570)
Q Consensus 187 ~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~-----------------~~~~~W~~~~~~~~~aIr~~dp~~lIiVe 249 (570)
.++|+++|++||+|||++|+|++|||+|||++.. .+..+|+.++++++++||++||+++|+|+
T Consensus 173 ~~~~~~~w~~lA~ryk~~p~Vi~~eL~NEP~~~~~~~~~~~~~~~~~W~~~~~~~~w~~~~~~ai~aIRa~dp~~lIiv~ 252 (458)
T 3qho_A 173 EEDFINTWIEVAKRFGKYWNVIGADLKNEPHSVTSPPAAYTDGTGATWGMGNPATDWNLAAERIGKAILKVAPHWLIFVE 252 (458)
T ss_dssp HHHHHHHHHHHHHHHTTSTTEEEEECSSCCCCSSCTTGGGTSSSSCBSSSSCTTTBHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEccCCCCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhCCCCEEEEc
Confidence 8999999999999999999999999999999631 13468999999999999999999999999
Q ss_pred CCCCCC-----------------cchhhhhcccCcCCCCCEEEEEeecCCCCC-CCCCCCCCcchhhHHHHHHHHHHHHH
Q 008330 250 GLNFDK-----------------DLSFVRNQAVNLTFTGKLVFEAHWYGFTDG-QAWVDGNPNQVCGRVVDNVMRLSGFL 311 (570)
Q Consensus 250 G~~w~~-----------------dl~~~~~~p~~l~~~~nlVys~H~Y~~~~~-~~w~~~~~~~~~~~~~~~~~~~~g~l 311 (570)
|..|++ +|+.+++.|++++ .+|+||++|.|+++++ |+|+.+ .+..|.++.+.|+++++|+
T Consensus 253 G~~w~~~~~~~~~~~~~~~wwg~~l~~v~~~Pi~l~-~~nlvYs~H~Y~~~~~~~~~~~~-~~~~~~~~~~~w~~~~g~l 330 (458)
T 3qho_A 253 GTQFTNPKTDSSYKWGYNAWWGGNLMAVKDYPVNLP-RNKLVYSPHVFGPDVYNQPYFGP-AKGFPDNLPDIWYHHFGYV 330 (458)
T ss_dssp CBSCCCHHHHHTSTTTTCCCTTCBCGGGTTSCCCSC-TTTEEECCBCCCTTTCCCGGGSG-GGTTTTTHHHHHHHHTTHH
T ss_pred CCcccCccccccccccccCcCCCCchhhhcCCCcCC-CCCEEEEEEECCCCCCCCccccC-ccchHHHHHHHHHhhhhhH
Confidence 998865 8999999999876 6999999999999987 788743 2345678899999999999
Q ss_pred H-hcCCCeEEeccccCCCC-CCcchHHHHHHHHHHHHHCCC-ceEEeccCceeecccCccCCCceeeeecCCCCCccchh
Q 008330 312 L-EQGWPLFVSEFGADLRG-NNVNDNRYLNCFFGVAAELDW-DWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSS 388 (570)
Q Consensus 312 ~-~~g~Pv~iGEFG~~~~~-~~~~~~~~~~~~~~~~~~~gi-gw~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~~~~~~ 388 (570)
. +++.||+|||||..+.. .++.+.+|++++++|+++++| +|++|+++ ++++||+|||++||.+++.+
T Consensus 331 ~~~~~~Pl~igEfG~~~~~g~~~~~~~w~~~~~~yl~~~~i~~w~~W~~n---------p~s~dt~Gll~~dW~t~~~~- 400 (458)
T 3qho_A 331 KLELGYSVVIGEFGGKYGHGGDPRDVIWQNKLVDWMIENKFCDFFYWSWN---------PDSGDTGGILQDDWTTIWED- 400 (458)
T ss_dssp HHTTCCCBCBCBCCCCTTSSSCTHHHHHHHHHHHHHHHTTCCCEEESCSS---------SCCTTTCCSBCTTSSSBCHH-
T ss_pred hhcCCCcEEEEecCCCcCCCCCcchHHHHHHHHHHHHhcCCCCEEEEecC---------CCCCCCCcccccccCCcChH-
Confidence 7 69999999999999853 445578999999999999997 89999998 88899999999999999987
Q ss_pred HHHHHHhcccccC
Q 008330 389 FLERISSLQSPFR 401 (570)
Q Consensus 389 ~~~~~~~l~~~~~ 401 (570)
++++|++.+.
T Consensus 401 ---k~~~l~~~~~ 410 (458)
T 3qho_A 401 ---KYNNLKRLMD 410 (458)
T ss_dssp ---HHHHHGGGGC
T ss_pred ---HHHHHHHHhc
Confidence 6688888774
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-51 Score=429.97 Aligned_cols=320 Identities=23% Similarity=0.407 Sum_probs=262.6
Q ss_pred CCCCeEecCCeEEcCCCCEEEEEEeeCCCCCC-ccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhh
Q 008330 35 IGLPLSTNSRWIVDENGHRVKLACVNWVSHLE-PVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVR 113 (570)
Q Consensus 35 ~~~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~-~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~ 113 (570)
..++|+|+|++|||.+|++|+||||||+|++. +.+++|++..+++++++.|+++|||+||||+.++.+.++..+
T Consensus 2 ~~~~l~v~G~~~~d~~G~~~~l~GvN~~g~~~~~~~~~g~~~~~~~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~----- 76 (358)
T 1ece_A 2 GGGYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMP----- 76 (358)
T ss_dssp CCSCCEEETTEEECTTSCEECCEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCC-----
T ss_pred CCCCEEEcCCEEEcCCCCEEEEEEEecCCcCccccCccchhhchHHHHHHHHHHcCCCEEEeeccHHHhcCCCCC-----
Confidence 35799999999999999999999999999864 567899999999999999999999999999998876542100
Q ss_pred hhhhhccchhhccCcc-cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHH
Q 008330 114 QSFQKLGLLEAIGGIQ-SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIK 192 (570)
Q Consensus 114 ~s~~~lg~~~~~~g~~-~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~ 192 (570)
..+ .+ ..||.+.+.+.+++++++|++|.++||+||||+|. +++ . .+...|+.+. ...+++.+
T Consensus 77 ~~~-----------~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h~--~~~--~-~~~~~w~~~~-~~~~~~~~ 139 (358)
T 1ece_A 77 NSI-----------NFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHR--PDC--S-GQSALWYTSS-VSEATWIS 139 (358)
T ss_dssp CSC-----------CCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEE--SBT--T-BCCSSSCCSS-SCHHHHHH
T ss_pred ccc-----------cccccCccccCccHHHHHHHHHHHHHHCCCEEEEecCC--CCC--C-CCCCCCcCCC-ccHHHHHH
Confidence 000 01 26888888889999999999999999999999998 322 1 1234566655 46899999
Q ss_pred HHHHHHHHhCCCCcEEEEeccCCCCCCC-----CChhHHHHHHHHHHHHHHhcCCCcEEEEeCCC--------CCCcchh
Q 008330 193 GLTKMATIFNGVRNVVGMSLRNELRGPK-----QNVKDWYRYMQLGAEAVHAANPEVLVILSGLN--------FDKDLSF 259 (570)
Q Consensus 193 ~w~~iA~ryk~~p~Vig~dL~NEP~~~~-----~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~--------w~~dl~~ 259 (570)
+|++||+|||++|+|++|||+|||+... .....|..++++++++||+++|+++|+|+|.. |+.+++.
T Consensus 140 ~~~~ia~r~~~~p~v~~~el~NEP~~~~~w~~~~~~~~~~~~~~~~~~~Ir~~dp~~~v~v~g~~~~~~~~~~w~~~~~~ 219 (358)
T 1ece_A 140 DLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYWWGGNLQG 219 (358)
T ss_dssp HHHHHHHHTTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETTEECSTTTBCTT
T ss_pred HHHHHHHHhcCCCcEEEEEcccCCCCcccCCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEECCCccCCCCCCccCCcCCc
Confidence 9999999999999999999999998752 24578999999999999999999999999987 7888887
Q ss_pred hhhcccCcCCCCCEEEEEeecCCCCC-CCCCCCCCcchhhHHHHHHHHHHHHHH-hcCCCeEEeccccCCCCCCcchHHH
Q 008330 260 VRNQAVNLTFTGKLVFEAHWYGFTDG-QAWVDGNPNQVCGRVVDNVMRLSGFLL-EQGWPLFVSEFGADLRGNNVNDNRY 337 (570)
Q Consensus 260 ~~~~p~~l~~~~nlVys~H~Y~~~~~-~~w~~~~~~~~~~~~~~~~~~~~g~l~-~~g~Pv~iGEFG~~~~~~~~~~~~~ 337 (570)
+...|+.++.++|+||++|.|.+..+ +.|..... .+..+...+.+.+.++. +.++||+|||||+.... ..+..|
T Consensus 220 ~~~~~~~~~~~~~~v~s~H~Y~~~~~~~~w~~~~~--~~~~~~~~~~~~~~~~~~~~g~Pv~igEfG~~~~~--~~~~~~ 295 (358)
T 1ece_A 220 AGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPT--FPNNMPGIWNKNWGYLFNQNIAPVWLGEFGTTLQS--TTDQTW 295 (358)
T ss_dssp TTTSCCCCSSSSCEEEEEECCCTTTCCCGGGSCTT--TTTTHHHHHHHHTHHHHHTTSSCEEEEECCCCCCS--HHHHHH
T ss_pred CccCCCcCCCCCceEEeeeecCCCcCCcccccCcc--hhhHHHHHHHHHHHHHHhcCCCCEEEeccCCCCCC--CccHHH
Confidence 77777776656899999999998876 56765321 22345555666666654 47899999999998753 246799
Q ss_pred HHHHHHHHHH------CCCceEEeccCceeecccCccCCCceeeeecCCCCCccchhH
Q 008330 338 LNCFFGVAAE------LDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSF 389 (570)
Q Consensus 338 ~~~~~~~~~~------~gigw~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~~~~~~~ 389 (570)
++++++++++ ++++|++|+++ ++.+|++||+++||.+++.+++
T Consensus 296 ~~~~~~~~~~~~~~~~~~ig~~~W~~~---------~~~~d~~Gl~~~dw~~~~~~k~ 344 (358)
T 1ece_A 296 LKTLVQYLRPTAQYGADSFQWTFWSWN---------PDSGDTGGILKDDWQTVDTVKD 344 (358)
T ss_dssp HHHHHHHTCCHHHHTTSSCEEEESCSC---------SCCTTTCCSBCTTSSSBCHHHH
T ss_pred HHHHHHHHHHhhhcccCCceeeEEccc---------CCCCCCCceeccccCCcChHHH
Confidence 9999999999 99999999997 5668999999999999999854
|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-43 Score=370.07 Aligned_cols=268 Identities=17% Similarity=0.213 Sum_probs=216.0
Q ss_pred CCCCCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhh
Q 008330 34 AIGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVR 113 (570)
Q Consensus 34 ~~~~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~ 113 (570)
...++|+|+|++|+|.+|++|+||||||.+.+. ..++|.+ .+++++.||++|||+||+|+.++.+.+.
T Consensus 47 ~~~~~l~v~G~~~~d~nG~~~~l~Gvn~~~~~~-~~~~g~~---~~~di~~ik~~G~N~VRi~~~~~~~~~~-------- 114 (359)
T 4hty_A 47 RQLPLIKVEGNRFVDEQGKTIVFRGVNISDPDK-IDKDKRF---SKKHFEVIRSWGANVVRVPVHPRAWKER-------- 114 (359)
T ss_dssp CCCCCCEEETTEEECTTCCEECCEEEEECCHHH-HHHTTCC---SHHHHHHHHHTTCSEEEEEECHHHHHHH--------
T ss_pred CCCCcEEEeCCEEECCCCCEEEEEEEecCCccc-CCCCCCc---CHHHHHHHHhcCCCEEEEeccHHHhhcc--------
Confidence 355789999999999999999999999986532 2345555 3678999999999999999988654320
Q ss_pred hhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCC--CCHHHHH
Q 008330 114 QSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQY--FNPDLWI 191 (570)
Q Consensus 114 ~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~--~~~~~~~ 191 (570)
.+.++++.++++|++|.++|||||||+|...+. .+..|.+.. ...++++
T Consensus 115 ----------------------~~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~~~-------~~~~~~~~~~~~~~~~~~ 165 (359)
T 4hty_A 115 ----------------------GVKGYLELLDQVVAWNNELGIYTILDWHSIGNL-------KSEMFQNNSYHTTKGETF 165 (359)
T ss_dssp ----------------------HHHHHHHHHHHHHHHHHHTTCEEEEEECCEEET-------TTTEESSGGGCCCHHHHH
T ss_pred ----------------------CCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCC-------CcccccCCcchhHHHHHH
Confidence 023679999999999999999999999986421 123344432 2478999
Q ss_pred HHHHHHHHHhCCCCcEEEEeccCCCCCCC-----CChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccC
Q 008330 192 KGLTKMATIFNGVRNVVGMSLRNELRGPK-----QNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVN 266 (570)
Q Consensus 192 ~~w~~iA~ryk~~p~Vig~dL~NEP~~~~-----~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~ 266 (570)
++|++||+|||++|+|++|||+|||.... .+...|..++++++++||+++|+++|+|+|..|+.++..+...|+.
T Consensus 166 ~~~~~la~ryk~~p~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~g~~w~~~~~~~~~~p~~ 245 (359)
T 4hty_A 166 DFWRRVSERYNGINSVAFYEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQAHNPKAIALVAGFNWAYDLKEAAANPID 245 (359)
T ss_dssp HHHHHHHHHTTTCTTEEEEESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHHHCTTCEEEEECHHHHTCCHHHHHSCCS
T ss_pred HHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEcCcccccccchhhcCCCC
Confidence 99999999999999999999999998642 2468899999999999999999999999999999999888777764
Q ss_pred cCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC------cchHHHHHH
Q 008330 267 LTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN------VNDNRYLNC 340 (570)
Q Consensus 267 l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~------~~~~~~~~~ 340 (570)
.+|+||++|+|++...+ .+.+.+++.++++ ..++||||||||..+.++. ..+.+|+++
T Consensus 246 ---~~n~~ys~H~Y~~~~~~------------~~~~~~~~~~~~~-~~~~Pv~vtEfG~~~~~g~g~~~~~~~~~~y~~~ 309 (359)
T 4hty_A 246 ---RQNIAYVSHPYPQKVGA------------PYQANWERDFGFM-ADKYPVFATEIGYQRATDKGAHIPVIDDGSYGPR 309 (359)
T ss_dssp ---SSSEEEECCCCTTSSCS------------SHHHHHHHHTGGG-GGTSCEEEEEECCBCTTSTTCCTTSBCCSTHHHH
T ss_pred ---CCCEEEEEEeCCCCCCc------------chHHHHHHHHHHH-hcCCCEEEecccCCCCCCCCcccccccHHHHHHH
Confidence 37999999999876432 2334555555554 3589999999999875432 235789999
Q ss_pred HHHHHHHCCCceEEeccC
Q 008330 341 FFGVAAELDWDWALWTLV 358 (570)
Q Consensus 341 ~~~~~~~~gigw~~W~~~ 358 (570)
+++++++++|+|++|+|+
T Consensus 310 ~~~~~~~~~i~~~~Ws~~ 327 (359)
T 4hty_A 310 ITDYFNSKGISWVAWVFD 327 (359)
T ss_dssp HHHHHHHHTCEEEEEEES
T ss_pred HHHHHHHcCCeEEEEEeC
Confidence 999999999999999997
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-42 Score=351.75 Aligned_cols=279 Identities=19% Similarity=0.227 Sum_probs=214.8
Q ss_pred CCCCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHH-HcCCcEEEecccccccccCccccchhh
Q 008330 35 IGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVV-DMGFNCVRLTWPLYLATNDSLASLTVR 113 (570)
Q Consensus 35 ~~~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~-~~GfN~VRlPi~~~~~~~~~~~n~tv~ 113 (570)
+.++|+|+|++|+|.+|++|+|||||+.++.-. +. .-.+++++.|+ ++|||+||||+.+. ..
T Consensus 8 ~~g~l~v~G~~l~d~nG~~v~lrGvn~~~~~~~--~~----~~~~~~~~~l~~~~G~N~VRip~~~~---~~-------- 70 (303)
T 7a3h_A 8 EHGQLSISNGELVNERGEQVQLKGMSSHGLQWY--GQ----FVNYESMKWLRDDWGINVFRAAMYTS---SG-------- 70 (303)
T ss_dssp HHCSCEEETTEEECTTSCBCCCEEEEESCHHHH--GG----GCSHHHHHHHHHHTCCCEEEEEEESS---TT--------
T ss_pred CCCeEEEeCCEEECCCCCEEEEEEeccCccccc--cc----cCCHHHHHHHHHhcCCCEEEEEEEeC---CC--------
Confidence 347899999999999999999999998754310 00 01256788887 79999999999762 10
Q ss_pred hhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHH
Q 008330 114 QSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKG 193 (570)
Q Consensus 114 ~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~ 193 (570)
+.+.+++++++||++|++|.++|||||||+|...++ + .....+++.++
T Consensus 71 -------------------~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~~------~-------~~~~~~~~~~~ 118 (303)
T 7a3h_A 71 -------------------GYIDDPSVKEKVKEAVEAAIDLDIYVIIDWHILSDN------D-------PNIYKEEAKDF 118 (303)
T ss_dssp -------------------STTTCTTHHHHHHHHHHHHHHHTCEEEEEEECSSSC------S-------TTTTHHHHHHH
T ss_pred -------------------CccCCHHHHHHHHHHHHHHHHCCCEEEEEecccCCC------C-------chHHHHHHHHH
Confidence 011234589999999999999999999999987532 1 11246889999
Q ss_pred HHHHHHHhCCCCcEEEEeccCCCCCCCCChh-HHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCC
Q 008330 194 LTKMATIFNGVRNVVGMSLRNELRGPKQNVK-DWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGK 272 (570)
Q Consensus 194 w~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~-~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~n 272 (570)
|++||+|||++|+|+ |||+|||+.....+. .|..++++++++||+++|+++|+|++..|+.++..+...|+. ++|
T Consensus 119 w~~ia~r~~~~~~Vi-~el~NEP~~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~~w~~~~~~~~~~p~~---~~n 194 (303)
T 7a3h_A 119 FDEMSELYGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLA---DPN 194 (303)
T ss_dssp HHHHHHHHTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCHHHHTBHHHHHTSCCS---CTT
T ss_pred HHHHHHHhCCCCeEE-EEeccCCCCCCcChHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCcccchhhHhhCCCC---CCC
Confidence 999999999999999 999999997532333 788999999999999999999999999999888877666653 479
Q ss_pred EEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC-cchHHHHHHHHHHHHHCCCc
Q 008330 273 LVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN-VNDNRYLNCFFGVAAELDWD 351 (570)
Q Consensus 273 lVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~-~~~~~~~~~~~~~~~~~gig 351 (570)
+||++|.|.+... . .+.+...++.+.+.|++|||||.....++ ..+..+++++++++++++++
T Consensus 195 ~v~s~H~Y~~~~~------------~----~~~~~~~~~~~~g~P~~igEfG~~~~~~~g~~~~~~~~~~l~~~~~~~i~ 258 (303)
T 7a3h_A 195 VMYAFHFYAGTHG------------Q----NLRDQVDYALDQGAAIFVSEWGTSAATGDGGVFLDEAQVWIDFMDERNLS 258 (303)
T ss_dssp EEEEEEEETTSCC------------H----HHHHHHHHHHHTTCCEEEEEEESSCTTSCSCCCHHHHHHHHHHHHHTTCC
T ss_pred EEEEEEecCCCch------------H----HHHHHHHHHHHcCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHHhcCCc
Confidence 9999999985431 1 23444566677899999999999876542 23568889999999999999
Q ss_pred eEEeccCceeecccCccCCCceeeeec------CCCCCccchhHHHH
Q 008330 352 WALWTLVGSYYLREGVIGLNEYYGLFD------WNWCDIRNSSFLER 392 (570)
Q Consensus 352 w~~W~~~G~y~~r~~~~~~~et~Gll~------~dw~~~~~~~~~~~ 392 (570)
|++|+|+ +.+|+.++|+ .+|..-+..+..+.
T Consensus 259 w~~W~~~----------~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~ 295 (303)
T 7a3h_A 259 WANWSLT----------HKDESSAALMPGANPTGGWTEAELSPSGTF 295 (303)
T ss_dssp EEEEEES----------CCSSTTCSBCTTCCTTCCCCGGGBCHHHHH
T ss_pred eEEEEec----------CCCCccceecCCCCCCCCCChhhcCHHHHH
Confidence 9999996 2356677765 25655434444433
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-41 Score=353.62 Aligned_cols=294 Identities=15% Similarity=0.170 Sum_probs=223.3
Q ss_pred EEeeCCCCCCccccCCCCCCh--HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCC
Q 008330 57 ACVNWVSHLEPVVAEGLSKQP--MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPS 134 (570)
Q Consensus 57 ~GVNw~g~~~~~v~~Gl~~~~--~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~ 134 (570)
+|+|.....+....|+.|..| .+++++.|+++|||+||||++|+.+.++ ..+.
T Consensus 21 ~G~nlgn~~d~~~~e~~W~~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~-------------------------~~~~ 75 (345)
T 3ndz_A 21 VGWNLGNTMDAIGGETNWGNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGA-------------------------APEY 75 (345)
T ss_dssp SEEEETTSTTSTTSTTTTSCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCC-------------------------TTTC
T ss_pred CCEeeCcCcCCCCCCCCCCCCCCcHHHHHHHHHCCCCEEEEeeehHHhCCC-------------------------CCCC
Confidence 477876555443456667655 5899999999999999999998765431 0122
Q ss_pred CCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccC
Q 008330 135 IVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRN 214 (570)
Q Consensus 135 ~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~N 214 (570)
..+.+++++|+++|++|.++|||||||+|+.. +|.. ..++... ...++++++|++||+|||+++.+++|||+|
T Consensus 76 ~~~~~~l~~l~~~v~~a~~~Gi~vildlH~~~-~w~~-----~~~~~~~-~~~~~~~~~w~~iA~~y~~~~~~v~~el~N 148 (345)
T 3ndz_A 76 TIDQTWMKRVEEIANYAFDNDMYVIINLHHEN-EWLK-----PFYANEA-QVKAQLTKVWTQIANNFKKYGDHLIFETMN 148 (345)
T ss_dssp CBCHHHHHHHHHHHHHHHTTTCEEEECCCSCT-TTCC-----CSTTTHH-HHHHHHHHHHHHHHHHTTTCCTTEEEESCS
T ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEEecCCcc-cccc-----ccccchH-HHHHHHHHHHHHHHHHHcCCCCceEEEecc
Confidence 34567899999999999999999999999975 4531 1112111 246889999999999999998888999999
Q ss_pred CCCCCCC----------ChhHHHHHHHHHHHHHHhc---CCCcEEEEeCCCCCCcchhhhhcccCcC-CCCCEEEEEeec
Q 008330 215 ELRGPKQ----------NVKDWYRYMQLGAEAVHAA---NPEVLVILSGLNFDKDLSFVRNQAVNLT-FTGKLVFEAHWY 280 (570)
Q Consensus 215 EP~~~~~----------~~~~W~~~~~~~~~aIr~~---dp~~lIiVeG~~w~~dl~~~~~~p~~l~-~~~nlVys~H~Y 280 (570)
||+.... ....+++++++++++||++ ||+++|+|+|..|+.+...+.. +..+ .++|+||++|+|
T Consensus 149 EP~~~~~~~~W~~~~~~~~~~l~~~~~~~i~aIR~~g~~np~~~Iiv~g~~~~~~~~~~~~--~~~P~~~~n~v~s~H~Y 226 (345)
T 3ndz_A 149 EPRPVGASLQWTGGSYENREVVNRYNLTAVNAIRATGGNNATRYIMVPTLAASAMSTTIND--LVIPNNDSKVIVSLHMY 226 (345)
T ss_dssp CCCCCSGGGTTSCCCHHHHHHHHHHHHHHHHHHHHTCGGGGTSCEEEECGGGCCSHHHHHH--CCCGGGCTTEEEEEECC
T ss_pred CCCCCCcccccCCCCchhHHHHHHHHHHHHHHHHhcCCCCCCcEEEECCCccCcccchhhc--ccCCCCCCcEEEEEEec
Confidence 9997521 1245678999999999999 8999999999999876433322 1222 258999999999
Q ss_pred CCCCC--C-----CCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCCceE
Q 008330 281 GFTDG--Q-----AWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWA 353 (570)
Q Consensus 281 ~~~~~--~-----~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gigw~ 353 (570)
.|+.+ + .|.. ....+.+.+.+.....++.++|+||+|||||+....+...+.+|++++++++++++|+|+
T Consensus 227 ~p~~f~~~~~g~~~w~~---~~~~~~~~~~~~~~~~~~~~~g~pv~iGEfG~~~~~~~~~~~~~~~~~~~~~~~~gi~~~ 303 (345)
T 3ndz_A 227 SPYFFAMDINGTSSWGS---DYDKSSLDSEFDAVYNKFVKNGRAVVIGEMGSINKNNTAARVTHAEYYAKSAKARGLTPI 303 (345)
T ss_dssp CSHHHHTCTTSCSCCCS---HHHHHHHHHHHHHHHHHTGGGTCCEEEEEECCCCSSCHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred CchhcccCCCCCcCCCC---cccHHHHHHHHHHHHHHHHHcCCcEEEEeecCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 98543 1 2321 112445666666666677789999999999998776544567899999999999999999
Q ss_pred EeccCceeecccCccCCCceeeeecCCCCCccchhHHHHH
Q 008330 354 LWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLERI 393 (570)
Q Consensus 354 ~W~~~G~y~~r~~~~~~~et~Gll~~dw~~~~~~~~~~~~ 393 (570)
+|+++ .| ..+.++.|||+++++.++++|++++.|
T Consensus 304 ~W~~g-~~-----~~~~~~~fG~~dr~~~~w~~p~~~~~l 337 (345)
T 3ndz_A 304 WWDNG-YS-----VAGKAETFGIFNRSNLTWDAPEVMKAF 337 (345)
T ss_dssp EEECS-CC-----CTTSTTCCCCEETTTTEESSHHHHHHH
T ss_pred EECCC-CC-----CCCCCcccceEECCCCcCCCHHHHHHH
Confidence 99985 32 144578999999999999999887765
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-41 Score=357.94 Aligned_cols=316 Identities=18% Similarity=0.219 Sum_probs=224.3
Q ss_pred CeEecCCeEEcCCCCEEEEEEeeCCCCCCcccc-CCCCCCh--HHHHHHHHHHcCCcEEEecccccccccCccccchhhh
Q 008330 38 PLSTNSRWIVDENGHRVKLACVNWVSHLEPVVA-EGLSKQP--MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQ 114 (570)
Q Consensus 38 ~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~-~Gl~~~~--~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~ 114 (570)
+.++++++||++.|+-|.| .||++....-++ ++.|..+ .+++++.|+++|||+||||+.++.+..+
T Consensus 30 ~~~~~~~~~v~~~g~G~nl--g~~~~~~~~~~~~~~~w~~~~~~~~d~~~l~~~G~n~vRl~i~w~~~~~~--------- 98 (395)
T 2jep_A 30 ASAADASQIVSEMGAGWNL--GNQLEAAVNGTPNETAWGNPTVTPELIKKVKAAGFKSIRIPVSYLNNIGS--------- 98 (395)
T ss_dssp ---CCHHHHHHHHCSEEEE--CSSTTCEETTEECTTTTSCCCCCHHHHHHHHHTTCCEEEECCCCGGGBCC---------
T ss_pred CCCcCHHHHHHhcCCceee--CcccccCCCCCCcccccCCCcCcHHHHHHHHHcCCCEEEEeeeeccccCC---------
Confidence 4577899999999954444 334333211112 4566544 7889999999999999999998533210
Q ss_pred hhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCC----CHHHH
Q 008330 115 SFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYF----NPDLW 190 (570)
Q Consensus 115 s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~----~~~~~ 190 (570)
..|...+.+++++++++|++|.++||+||||+|+.. +++. + .+|...... ..+.+
T Consensus 99 ----------------~~~~~~~~~~l~~~d~~v~~a~~~Gi~vild~h~~~--~~~~--~-g~w~~~~~~~~~~~~~~~ 157 (395)
T 2jep_A 99 ----------------APNYTINAAWLNRIQQVVDYAYNEGLYVIINIHGDG--YNSV--Q-GGWLLVNGGNQTAIKEKY 157 (395)
T ss_dssp ----------------TTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCGGG--CTTS--T-TCCCCTTCSCHHHHHHHH
T ss_pred ----------------CCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCcc--ccCC--C-CccccCCcccHHHHHHHH
Confidence 012234567899999999999999999999999973 2221 1 234322111 25788
Q ss_pred HHHHHHHHHHhCCCCcEEEEeccCCCCCCC---CC---hhHHHHHHHHHHHHHHhc---CCCcEEEEeCCCCCCcchhhh
Q 008330 191 IKGLTKMATIFNGVRNVVGMSLRNELRGPK---QN---VKDWYRYMQLGAEAVHAA---NPEVLVILSGLNFDKDLSFVR 261 (570)
Q Consensus 191 ~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~---~~---~~~W~~~~~~~~~aIr~~---dp~~lIiVeG~~w~~dl~~~~ 261 (570)
.++|++||+|||++++|++|||+|||+... .. ...|..++++++++||++ ||+++|+|+|..++.+.....
T Consensus 158 ~~~~~~ia~~~~~~~~v~~~el~NEP~~~~w~~~~~~~~~~~~~~~~~~~~aIR~~~~~np~~~I~v~g~~~~~~~~~~~ 237 (395)
T 2jep_A 158 KKVWQQIATKFSNYNDRLIFESMNEVFDGNYGNPNSAYYTNLNAYNQIFVDTVRQTGGNNNARWLLVPGWNTNIDYTVGN 237 (395)
T ss_dssp HHHHHHHHHHTTTCCTTEEEECCSSCSCSCCSSCCHHHHHHHHHHHHHHHHHHHTSSGGGGTSCEEEECGGGCHHHHHSS
T ss_pred HHHHHHHHHHhCCCCCEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEEECCCccCccccccc
Confidence 999999999999999999999999998742 11 257999999999999999 678999999977654322110
Q ss_pred ---hcccC------c-CCCCCEEEEEeecCCCCC-C-------CCCCCCCcc-------hhhHHHHHHHHHHHHHHhcCC
Q 008330 262 ---NQAVN------L-TFTGKLVFEAHWYGFTDG-Q-------AWVDGNPNQ-------VCGRVVDNVMRLSGFLLEQGW 316 (570)
Q Consensus 262 ---~~p~~------l-~~~~nlVys~H~Y~~~~~-~-------~w~~~~~~~-------~~~~~~~~~~~~~g~l~~~g~ 316 (570)
..|.+ + ...+|+||++|+|.+..+ + .|....... ....+...+.....++.+.++
T Consensus 238 ~~~~~p~d~~~~~~i~~~~~~~v~s~H~Y~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~ 317 (395)
T 2jep_A 238 YGFTLPTDNYRSSAIPSSQKRIMISAHYYSPWDFAGEENGNITQWGATSTNPAKKSTWGQEDYLESQFKSMYDKFVTQGY 317 (395)
T ss_dssp SSCCCCCCTTSCTTSCTTCCCEEEEEEECCSHHHHTCSSSSCCBCSTTCSCGGGBCSSCSHHHHHHHHHHHHHHTGGGTC
T ss_pred ccccCCCCccccccCCCCCCCEEEEEEecCCccccCcccccccccccccCCcccccccCcHHHHHHHHHHHHHHHHHcCC
Confidence 11221 0 124799999999997543 1 454321111 013455666666667777899
Q ss_pred CeEEeccccCCCCC-----CcchHHHHHHHHHHHHHCCCceEEeccCceeecccCccCCCceeeeecCCCCCccchhHHH
Q 008330 317 PLFVSEFGADLRGN-----NVNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLE 391 (570)
Q Consensus 317 Pv~iGEFG~~~~~~-----~~~~~~~~~~~~~~~~~~gigw~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~~~~~~~~~ 391 (570)
||+|||||+....+ ...+.+|++++++++++++++|++|++++ ..+++|||++++|.+++++++++
T Consensus 318 Pv~igEfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~W~~~~---------~~~~~~gl~~~~~~~~~~~~~~~ 388 (395)
T 2jep_A 318 PVVIGEFGSIDKTSYDSSNNVYRAAYAKAVTAKAKKYKMVPVYWDNGH---------NGQHGFALFNRSNNTVTQQNIIN 388 (395)
T ss_dssp CEEEEEECCCCCTTTCTTHHHHHHHHHHHHHHHHHHTTCEEEEEECSC---------CSTTCCCSEETTTTEESCHHHHH
T ss_pred CEEEeeccccCCCCccCCChHHHHHHHHHHHHHHHHCCCeEEEECCCC---------CCCCCcceeeCCCCeECCHHHHH
Confidence 99999999987653 12346899999999999999999999973 24789999999999999998877
Q ss_pred HHH
Q 008330 392 RIS 394 (570)
Q Consensus 392 ~~~ 394 (570)
.|.
T Consensus 389 ~l~ 391 (395)
T 2jep_A 389 AIM 391 (395)
T ss_dssp HHH
T ss_pred HHH
Confidence 663
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=349.19 Aligned_cols=277 Identities=15% Similarity=0.238 Sum_probs=207.5
Q ss_pred CCCCCCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchh
Q 008330 33 PAIGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTV 112 (570)
Q Consensus 33 ~~~~~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv 112 (570)
++...+|+++|++|+|.+|++|+|||||+ ++ .+.....+++++.|+++|||+||||+... ..
T Consensus 19 ~~a~~~l~V~G~~l~d~nG~~~~lrGvn~-~~-------~~~~~~~~~~i~~lk~~G~N~VRip~~~~----~~------ 80 (345)
T 3jug_A 19 HMASSGFYVDGNTLYDANGQPFVMKGINH-GH-------AWYKDTASTAIPAIAEQGANTIRIVLSDG----GQ------ 80 (345)
T ss_dssp ----CCCEEETTEEECTTSCBCCCEEEEE-CG-------GGCGGGHHHHHHHHHHTTCSEEEEEECCS----SS------
T ss_pred ccCCCCeEEECCEEEccCCCEEEEecccc-cc-------cccChHHHHHHHHHHHcCCCEEEEEecCC----Cc------
Confidence 33445699999999999999999999995 22 11223456789999999999999998631 00
Q ss_pred hhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHH
Q 008330 113 RQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIK 192 (570)
Q Consensus 113 ~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~ 192 (570)
.+.+.++.++++|++|.++|||||||+|...+. + .....+++++
T Consensus 81 -----------------------~~~~~l~~ld~~v~~a~~~GiyVIlDlH~~~g~------~-------~~~~~~~~~~ 124 (345)
T 3jug_A 81 -----------------------WEKDDIDTVREVIELAEQNKMVAVVEVHDATGR------D-------SRSDLDRAVD 124 (345)
T ss_dssp -----------------------SCCCCHHHHHHHHHHHHTTTCEEEEEECTTTTC------C-------CHHHHHHHHH
T ss_pred -----------------------cCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCC------C-------cHHHHHHHHH
Confidence 112468999999999999999999999986421 1 1123688999
Q ss_pred HHHHHHHHhCCC-CcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccC---cC
Q 008330 193 GLTKMATIFNGV-RNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVN---LT 268 (570)
Q Consensus 193 ~w~~iA~ryk~~-p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~---l~ 268 (570)
+|++||+|||++ ++|+ |||+|||+... +...|.+++++++++||+++|+++|+|+|..|+++++.+...+.+ .+
T Consensus 125 ~w~~iA~ryk~~~~~Vi-~el~NEP~~~~-~~~~w~~~~~~~i~~IR~~dp~~~Iiv~g~~w~~~~~~~~~~~~~~~~~d 202 (345)
T 3jug_A 125 YWIEMKDALIGKEDTVI-INIANEWYGSW-DGAAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFNAD 202 (345)
T ss_dssp HHHHTHHHHTTCTTTEE-EECCTTCCCSS-CHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTBTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCeEE-EEecCCCCCCC-CHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCccccchhhccchhhhcccC
Confidence 999999999999 6775 99999999832 467899999999999999999999999999999988765433211 12
Q ss_pred CCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHC
Q 008330 269 FTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAEL 348 (570)
Q Consensus 269 ~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~ 348 (570)
.++|+||++|+|+++.. . .+.+.+...++.+.++||||||||+...+.+ .++++++++++++
T Consensus 203 p~~nlvys~H~Y~~~g~--------~------~~~~~~~~~~~~~~g~Pv~igEfG~~~~~~~----~~~~~~l~~~~~~ 264 (345)
T 3jug_A 203 PLKNTIFSIHMYEYAGG--------D------ANTVRSNIDRVIDQDLALVIGEFGHRHTDGD----VDEDTILSYSEET 264 (345)
T ss_dssp TTCCEEEEEEESTTTTS--------S------HHHHHHHHHHHHTTTCCEEEEEECCCCCC------CCHHHHHHHHHHH
T ss_pred CccceEEEEEecCCCCC--------C------HHHHHHHHHHHHHcCCcEEEECcCCCCCCCC----HHHHHHHHHHHHc
Confidence 35899999999964321 1 1234445567777999999999999876532 2468999999999
Q ss_pred CCceEEeccCceeecccCccCCCceeeeecC--CCCCccchhHHHHH
Q 008330 349 DWDWALWTLVGSYYLREGVIGLNEYYGLFDW--NWCDIRNSSFLERI 393 (570)
Q Consensus 349 gigw~~W~~~G~y~~r~~~~~~~et~Gll~~--dw~~~~~~~~~~~~ 393 (570)
+++|++|+|++ .++.+++|+. +|..-...+..+.+
T Consensus 265 ~i~w~~W~~~~----------~~~~~~~l~~~~~w~~~~lt~~G~~v 301 (345)
T 3jug_A 265 GTGWLAWSWKG----------NSAEWDYLDLSEDWAGNHLTDWGNRI 301 (345)
T ss_dssp TCEEEESCSSC----------CCGGGGGGCSBSSTTSSSBCHHHHHH
T ss_pred CCEEEEEEEEC----------CCCCcccccccCCCCccCcChhhhhh
Confidence 99999999963 2445666553 67655444444443
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=344.98 Aligned_cols=279 Identities=18% Similarity=0.226 Sum_probs=212.9
Q ss_pred CCCCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHH-HHcCCcEEEecccccccccCccccchhh
Q 008330 35 IGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRV-VDMGFNCVRLTWPLYLATNDSLASLTVR 113 (570)
Q Consensus 35 ~~~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i-~~~GfN~VRlPi~~~~~~~~~~~n~tv~ 113 (570)
..++|+|+|++|+|.+|++|+|||||+.++. +. |- .-.+++++.| +++|||+||+|+.+. .
T Consensus 33 ~~g~l~v~G~~l~d~nG~~v~l~Gvn~h~~~-~~---~~--~~~~~~~~~l~~~~G~N~VRi~~~~~---~--------- 94 (327)
T 3pzt_A 33 KNGQLSIKGTQLVNRDGKAVQLKGISSHGLQ-WY---GE--YVNKDSLKWLRDDWGITVFRAAMYTA---D--------- 94 (327)
T ss_dssp -CCSCEEETTEEECTTSCBCCCEEEEESCHH-HH---GG--GCSHHHHHHHHHHTCCSEEEEEEESS---T---------
T ss_pred cCCcEEEeCCEEECCCCCEEEEEEEcCCchh-hc---CC--CCCHHHHHHHHHhcCCCEEEEEeEEC---C---------
Confidence 4788999999999999999999999976432 00 10 0124567777 689999999999642 1
Q ss_pred hhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHH
Q 008330 114 QSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKG 193 (570)
Q Consensus 114 ~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~ 193 (570)
++.+.+.++++.++++|++|.++|||||||+|...++ + .....+++.++
T Consensus 95 ------------------~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~H~~~~~--------~-----~~~~~~~~~~~ 143 (327)
T 3pzt_A 95 ------------------GGYIDNPSVKNKVKEAVEAAKELGIYVIIDWHILNDG--------N-----PNQNKEKAKEF 143 (327)
T ss_dssp ------------------TSTTTCGGGHHHHHHHHHHHHHHTCEEEEEEECSSSC--------S-----TTTTHHHHHHH
T ss_pred ------------------CCcccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCC--------C-----chHHHHHHHHH
Confidence 0112245679999999999999999999999986532 1 11347889999
Q ss_pred HHHHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCE
Q 008330 194 LTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKL 273 (570)
Q Consensus 194 w~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nl 273 (570)
|++||+|||++|+|+ |||+|||+....-..+|..++++++++||+++|+++|+|++..|+.++..+...|+. ++|+
T Consensus 144 w~~~a~r~k~~p~Vi-~el~NEp~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~~w~~~~~~~~~~~~~---~~n~ 219 (327)
T 3pzt_A 144 FKEMSSLYGNTPNVI-YEIANEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVGTGTWSQDVNDAADDQLK---DANV 219 (327)
T ss_dssp HHHHHHHHTTCTTEE-EECCSCCCSSCCTTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHHTCHHHHHTSCCC---CTTE
T ss_pred HHHHHHHhCCCCcEE-EEeccCCCCCcccHHHHHHHHHHHHHHHHhhCCCCEEEEeCCcccccchhhhhCCCC---CCCe
Confidence 999999999999999 999999987432224799999999999999999999999999999888877666653 4799
Q ss_pred EEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC-cchHHHHHHHHHHHHHCCCce
Q 008330 274 VFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN-VNDNRYLNCFFGVAAELDWDW 352 (570)
Q Consensus 274 Vys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~-~~~~~~~~~~~~~~~~~gigw 352 (570)
||++|.|..... +.+.+...++.+.+.|+||||||.....++ ..+..+++++++++++++++|
T Consensus 220 v~s~H~Y~~~~~----------------~~~~~~~~~~~~~g~Pv~igEfG~~~~~g~g~~~~~~~~~~l~~~~~~~i~w 283 (327)
T 3pzt_A 220 MYALHFYAGTHG----------------QFLRDKANYALSKGAPIFVTEWGTSDASGNGGVFLDQSREWLKYLDSKTISW 283 (327)
T ss_dssp EEEEEEETTTCC----------------HHHHHHHHHHHHTTCCEEEEEEESSCTTSCSCCCHHHHHHHHHHHHHTTCCE
T ss_pred EEEEEecCCCch----------------HHHHHHHHHHHHcCCcEEEEccCCCCCCCCCcccHHHHHHHHHHHHHcCCee
Confidence 999999975321 123334456677899999999999886543 235678899999999999999
Q ss_pred EEeccCceeecccCccCCCceeeeecC------CCCCccchhHHHH
Q 008330 353 ALWTLVGSYYLREGVIGLNEYYGLFDW------NWCDIRNSSFLER 392 (570)
Q Consensus 353 ~~W~~~G~y~~r~~~~~~~et~Gll~~------dw~~~~~~~~~~~ 392 (570)
++|+|+ +..|+.++|+. +|.+-...+..+.
T Consensus 284 ~~W~~~----------d~~e~~~~l~~~~~~~~~~~~~~l~~~g~~ 319 (327)
T 3pzt_A 284 VNWNLS----------DKQESSSALKPGASKTGGWRLSDLSASGTF 319 (327)
T ss_dssp EEEEES----------CCSSTTCSBCTTCCTTCCCCGGGBCHHHHH
T ss_pred EEEEec----------CCCCcceeecCCCCCCCCCChHhcCHHHHH
Confidence 999996 33566666643 5655444444433
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=351.15 Aligned_cols=278 Identities=16% Similarity=0.236 Sum_probs=205.6
Q ss_pred CCCCeEecCC-eEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHH-HcCCcEEEecccccccccCccccchh
Q 008330 35 IGLPLSTNSR-WIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVV-DMGFNCVRLTWPLYLATNDSLASLTV 112 (570)
Q Consensus 35 ~~~~L~t~G~-~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~-~~GfN~VRlPi~~~~~~~~~~~n~tv 112 (570)
...+|+|+|+ +|||++|++|+||||||.++.. .+..+ .+++++.|+ ++|||+||||+.+. .+
T Consensus 17 ~~~~~~v~G~~~lvd~~G~~~~lrGvn~~~~~~--~~~~~----~~~d~~~l~~~~G~N~VRip~~~~---~~------- 80 (364)
T 1g01_A 17 ALQLVELNGQLTLAGEDGTPVQLRGMSTHGLQW--FGEIV----NENAFVALSNDWGSNMIRLAMYIG---EN------- 80 (364)
T ss_dssp SCEEEEETTEEEEECTTSCBCCCEEEEESCHHH--HGGGC----SHHHHHHHHTTSCCSEEEEEEESS---SS-------
T ss_pred CCCcEEecCCeeEECCCCCEEEEEEEecCcccc--cCCcc----CHHHHHHHHHHCCCCEEEEEeeeC---CC-------
Confidence 3457999999 8999999999999999976431 11111 357888886 99999999999863 10
Q ss_pred hhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHH
Q 008330 113 RQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIK 192 (570)
Q Consensus 113 ~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~ 192 (570)
+...+..++++++++|++|.++|||||||+|...++ +.+..+ .+++.+
T Consensus 81 --------------------~~~~~~~~l~~ld~~v~~a~~~Gi~VIld~H~~~~g------~~~~~~------~~~~~~ 128 (364)
T 1g01_A 81 --------------------GYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPG------DPRADV------YSGAYD 128 (364)
T ss_dssp --------------------STTTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSS------CTTSGG------GTTHHH
T ss_pred --------------------CCccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCC------CCChHH------HHHHHH
Confidence 011234578999999999999999999999985432 111111 245789
Q ss_pred HHHHHHHHhC---CCCcEEEEeccCCCCCCC-------C---ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchh
Q 008330 193 GLTKMATIFN---GVRNVVGMSLRNELRGPK-------Q---NVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSF 259 (570)
Q Consensus 193 ~w~~iA~ryk---~~p~Vig~dL~NEP~~~~-------~---~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~ 259 (570)
+|++||+||| ++++|+ |||+|||+... . .+..|+.++++++++||+++ +++|+|++..|+.+++.
T Consensus 129 ~w~~ia~~y~~~~~~~~Vi-~el~NEP~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~IR~~~-~~~I~v~~~~w~~~~~~ 206 (364)
T 1g01_A 129 FFEEIADHYKDHPKNHYII-WELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKG-DNMILVGNPNWSQRPDL 206 (364)
T ss_dssp HHHHHHHHHTTCTTGGGEE-EECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCHHHHTCHHH
T ss_pred HHHHHHHHhhccCCCCeEE-EEcCCCCCcCcCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcC-CcEEEECCCCcccccch
Confidence 9999999999 778998 99999998642 0 12456889999999999999 99999999999888776
Q ss_pred hhhcccCcCCCCCEEEEEeecCCCCCC---CCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC-cchH
Q 008330 260 VRNQAVNLTFTGKLVFEAHWYGFTDGQ---AWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN-VNDN 335 (570)
Q Consensus 260 ~~~~p~~l~~~~nlVys~H~Y~~~~~~---~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~-~~~~ 335 (570)
+...|+. ++|+||++|+|.++.+. .|.... .....+.+.....++.+.++||||||||+....+. ..+.
T Consensus 207 ~~~~p~~---~~niv~s~H~Y~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~Pv~igEfG~~~~~~~~~~~~ 279 (364)
T 1g01_A 207 SADNPID---AENIMYSVHFYTGSHGASHIGYPEGT----PSSERSNVMANVRYALDNGVAVFATEWGTSQANGDGGPYF 279 (364)
T ss_dssp HHHSCCS---SSSEEEEEEEETTTSCCCCCCCCTTC----CGGGCCCHHHHHHHHHHTTCCEEEEEEESSBTTTBSCCCH
T ss_pred hhcCCCC---CCCEEEEEEecCCccCCCCCCCCCCc----hHHHHHHHHHHHHHHHHCCCeEEEEccccccCCCCCCcCH
Confidence 6655643 47999999999987642 222111 11111223444556667899999999999875431 2345
Q ss_pred HHHHHHHHHHHHCCCceEEeccCceeecccCccCCCceeeeecC
Q 008330 336 RYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDW 379 (570)
Q Consensus 336 ~~~~~~~~~~~~~gigw~~W~~~G~y~~r~~~~~~~et~Gll~~ 379 (570)
.+++++++++++++|+|++|+|++. +|++|+|+.
T Consensus 280 ~~~~~~~~~~~~~~ig~~~W~~~~~----------~~~~~~l~~ 313 (364)
T 1g01_A 280 DEADVWLNFLNKHNISWANWSLTNK----------NEISGAFTP 313 (364)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCS----------SSTTCSBCC
T ss_pred HHHHHHHHHHHHCCCceEEEeCCCC----------CCceeeecC
Confidence 7889999999999999999999632 456666653
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=332.12 Aligned_cols=259 Identities=13% Similarity=0.122 Sum_probs=197.6
Q ss_pred EEEEEEeeCCCCCC-ccccCCCC----CChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccC
Q 008330 53 RVKLACVNWVSHLE-PVVAEGLS----KQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGG 127 (570)
Q Consensus 53 ~v~L~GVNw~g~~~-~~v~~Gl~----~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g 127 (570)
+|++|||||+|.+. ....+|.+ ..+.+++++.|+++|||+||||++|..+.++
T Consensus 3 ~~~~~GvN~~G~~~~~~~~~g~~~~~~~~~~~~di~~~~~~G~n~vRi~i~w~~~~~~---------------------- 60 (305)
T 1h1n_A 3 VFQWFGSNESGAEFGSQNLPGVEGKDYIWPDPNTIDTLISKGMNIFRVPFMMERLVPN---------------------- 60 (305)
T ss_dssp SSSEEEEEECCTTCSTTSSSCCBTTTBCCCCHHHHHHHHHTTCCEEEEEECHHHHSCS----------------------
T ss_pred cceEEEEeccccccCCCCCCCcccccCCCCCHHHHHHHHHCCCCEEEecccHHHcCCC----------------------
Confidence 46799999999754 22334443 2345899999999999999999998755431
Q ss_pred cccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcE
Q 008330 128 IQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNV 207 (570)
Q Consensus 128 ~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~V 207 (570)
..+...+.+++++|+++|++|.++||+||||+|+.. +|+ + +...+.+++.++|++||+||+++|+|
T Consensus 61 ---~~~~~~~~~~l~~~~~~v~~~~~~gi~vild~h~~~-~~~-----g-----~~~~~~~~~~~~~~~ia~~~~~~~~V 126 (305)
T 1h1n_A 61 ---SMTGSPDPNYLADLIATVNAITQKGAYAVVDPHNYG-RYY-----N-----SIISSPSDFETFWKTVASQFASNPLV 126 (305)
T ss_dssp ---STTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTT-EET-----T-----EECCCHHHHHHHHHHHHHTSTTCTTE
T ss_pred ---CCCCCcCHHHHHHHHHHHHHHHHCCCEEEEeccccc-ccc-----C-----CcCCcHHHHHHHHHHHHHHhCCCCeE
Confidence 011224567899999999999999999999999874 342 1 11124799999999999999999999
Q ss_pred EEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCC-CcEEEEeCCCCCCcchhhhhc-cc-Cc-CCCCCEEEEEeecCCC
Q 008330 208 VGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANP-EVLVILSGLNFDKDLSFVRNQ-AV-NL-TFTGKLVFEAHWYGFT 283 (570)
Q Consensus 208 ig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp-~~lIiVeG~~w~~dl~~~~~~-p~-~l-~~~~nlVys~H~Y~~~ 283 (570)
+|||+|||+.. +.++|..++++++++||+++| +++|+|+|..|+.+..+.... .+ .+ +..+|+||++|.|.+.
T Consensus 127 -~~~l~NEP~~~--~~~~w~~~~~~~~~~IR~~~~~~~~I~v~g~~~~~~~~~~~~~~~~~~~~~p~~~~v~s~H~Y~~~ 203 (305)
T 1h1n_A 127 -IFDTDNEYHDM--DQTLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTWTNVNDNMKSLTDPSDKIIYEMHQYLDS 203 (305)
T ss_dssp -EEECCSCCCSS--CHHHHHHHHHHHHHHHHHTTCCSSCEEEECTGGGBSTTHHHHSGGGGGCCCTTCCEEEEEEEECST
T ss_pred -EEeccCCCCCC--CHHHHHHHHHHHHHHHHhcCCCccEEEEccccccCcccccccCcccccCcCCCCCEEEEEEEcCCC
Confidence 89999999986 578999999999999999999 999999999997754431110 01 11 1247999999999987
Q ss_pred CCC---CCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCC---CceEEecc
Q 008330 284 DGQ---AWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELD---WDWALWTL 357 (570)
Q Consensus 284 ~~~---~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~g---igw~~W~~ 357 (570)
.+. .+.. ......+.+.....++.+.++||+|||||+... ..+.+|++++++++++++ ++|++|++
T Consensus 204 ~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~g~Pv~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~ig~~~W~~ 275 (305)
T 1h1n_A 204 DGSGTSATCV-----SSTIGQERITSATQWLRANGKKGIIGEFAGGAD---NVCETAITGMLDYMAQNTDVWTGAIWWAA 275 (305)
T ss_dssp TSSSCCSCCS-----CTTHHHHHHHHHHHHHHHTTCCEEEEEEECCSS---HHHHHHHHHHHHHHHTCTTTEEEEEEEEE
T ss_pred CCcCCCCCcc-----CcchHHHHHHHHHHHHHHcCCcEEEEeccCCCC---hHHHHHHHHHHHHHHHcCCeeEEEEEECC
Confidence 642 1110 011234456666677778999999999999862 456799999999999999 99999994
Q ss_pred C
Q 008330 358 V 358 (570)
Q Consensus 358 ~ 358 (570)
+
T Consensus 276 g 276 (305)
T 1h1n_A 276 G 276 (305)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-40 Score=340.32 Aligned_cols=285 Identities=13% Similarity=0.220 Sum_probs=216.5
Q ss_pred CCCCEEEEEEeeCCCCCCccccCCCCCChH-HHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccC
Q 008330 49 ENGHRVKLACVNWVSHLEPVVAEGLSKQPM-DMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGG 127 (570)
Q Consensus 49 ~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~-~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g 127 (570)
-+|++|.+|||||.+..+. ..+|.|..+. +++++.|+++|||+||+|+.|..+.++
T Consensus 6 ~~g~~~~~~GvN~~~~~~~-~~~~~w~~~~~~~d~~~l~~~G~n~vR~~i~w~~~~~~---------------------- 62 (317)
T 3aof_A 6 FERNKILGRGINIGNALEA-PNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYA---------------------- 62 (317)
T ss_dssp HHHHHHHCEEEECCSSTTS-SSTTTTSCCCCTHHHHHHHHHTCSEEEECCCGGGGBCS----------------------
T ss_pred hhhcccccccCcccccccC-CCCCcCCCCCCHHHHHHHHHcCCCEEEEeccHHHhcCC----------------------
Confidence 3789999999999844332 1256665554 889999999999999999998765431
Q ss_pred cccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcE
Q 008330 128 IQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNV 207 (570)
Q Consensus 128 ~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~V 207 (570)
..|...+.+.++.++++|++|.++||+||||+|+.. +|. .+.....+++.++|++||+|||++|+|
T Consensus 63 ---~~~~~~~~~~~~~~d~~v~~a~~~Gi~vild~h~~~-~~~----------~~~~~~~~~~~~~~~~ia~~~~~~~~v 128 (317)
T 3aof_A 63 ---FPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYE-ELM----------NDPEEHKERFLALWKQIADRYKDYPET 128 (317)
T ss_dssp ---STTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCH-HHH----------HCHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred ---CCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEecCCc-ccc----------CCcHHHHHHHHHHHHHHHHHhcCCCCe
Confidence 112234567899999999999999999999999863 221 111124688999999999999999999
Q ss_pred EEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCC-CCCEEEEEeecCCCCC-
Q 008330 208 VGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTF-TGKLVFEAHWYGFTDG- 285 (570)
Q Consensus 208 ig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~-~~nlVys~H~Y~~~~~- 285 (570)
++|||+|||+... +.+.|..++++++++||+++|+++|+|++..|+.. ..+...+ ++. ++++||++|.|.+..+
T Consensus 129 ~~~el~NEP~~~~-~~~~~~~~~~~~~~~iR~~~p~~~i~v~~~~~~~~-~~~~~~~--~p~~~~~~v~~~H~Y~~~~~~ 204 (317)
T 3aof_A 129 LFFEILNAPHGNL-TPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGI-SALEKLS--VPKWEKNSIVTIHYYNPFEFT 204 (317)
T ss_dssp EEEECCSSCCTTS-CHHHHHHHHHHHHHHHHHHCSSSCEEECCSGGGSS-TTGGGCC--CCTTCCSEEEEEECCCSHHHH
T ss_pred EEEEeccCCCCCC-CHHHHHHHHHHHHHHHHhhCCCCEEEECCCCcCcH-hHHhhCc--CCCCCCCEEEEEeccCCcccc
Confidence 9999999998752 57889999999999999999999999999888653 2333222 122 3699999999987432
Q ss_pred ---CCCCCCCC---------cchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCCceE
Q 008330 286 ---QAWVDGNP---------NQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWA 353 (570)
Q Consensus 286 ---~~w~~~~~---------~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gigw~ 353 (570)
+.|..... ....+.+.+.+.....++.+.++||+|||||+....+...+.+|++++++++++++++|+
T Consensus 205 ~~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~Pv~igEfG~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ 284 (317)
T 3aof_A 205 HQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSLA 284 (317)
T ss_dssp TTTCTTSTTGGGGTTCCCCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCCcCcccccCCcCcCcHHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 24643210 011234555566555566678999999999997754333457899999999999999999
Q ss_pred EeccCceeecccCccCCCceeeeecCCCCCccch
Q 008330 354 LWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNS 387 (570)
Q Consensus 354 ~W~~~G~y~~r~~~~~~~et~Gll~~dw~~~~~~ 387 (570)
+|+++ +.|||++.++.+++.+
T Consensus 285 ~W~~~-------------~~~gl~~~~~~~w~~~ 305 (317)
T 3aof_A 285 YWEFC-------------SGFGVYDTLRKTWNKD 305 (317)
T ss_dssp ESCSS-------------STTCSEETTTTEECHH
T ss_pred EEeCC-------------CCceeeeCCCCccChH
Confidence 99985 3589999999999865
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=330.19 Aligned_cols=269 Identities=17% Similarity=0.214 Sum_probs=203.4
Q ss_pred CCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHH-HcCCcEEEecccccccccCccccchhhhh
Q 008330 37 LPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVV-DMGFNCVRLTWPLYLATNDSLASLTVRQS 115 (570)
Q Consensus 37 ~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~-~~GfN~VRlPi~~~~~~~~~~~n~tv~~s 115 (570)
.+|+|+|++|+ .+|++|+|||||+.+++... |......+++++.|+ ++|||+||+|+.++ +.
T Consensus 3 ~~l~v~g~~i~-~nG~~v~l~Gvn~~~~~~~~---~~~~~~~~~di~~~~~~~G~N~vRi~~~~~---~~---------- 65 (293)
T 1tvn_A 3 EKLTVSGNQIL-AGGENTSFAGPSLFWSNTGW---GAEKFYTAETVAKAKTEFNATLIRAAIGHG---TS---------- 65 (293)
T ss_dssp CCEEEETTEEE-ETTEECCCEEEEECCCCTTS---SCGGGCSHHHHHHHHHHHCCSEEEEEEECC---TT----------
T ss_pred CcEEecCCEEE-eCCCEEEEEeeeeccccccc---CCCCCCCHHHHHHHHHhcCCCEEEEecccc---CC----------
Confidence 57999999999 79999999999998654211 100112478899999 59999999999873 10
Q ss_pred hhhccchhhccCccc-CCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHH
Q 008330 116 FQKLGLLEAIGGIQS-NNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGL 194 (570)
Q Consensus 116 ~~~lg~~~~~~g~~~-~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w 194 (570)
.+.+. .+| ..+++++|++|++|.++|||||||+|...+. ...+++.++|
T Consensus 66 ----------~~~~~~~~p----~~~~~~ld~~v~~a~~~Gi~vild~h~~~~~----------------~~~~~~~~~~ 115 (293)
T 1tvn_A 66 ----------TGGSLNFDW----EGNMSRLDTVVNAAIAEDMYVIIDFHSHEAH----------------TDQATAVRFF 115 (293)
T ss_dssp ----------STTSTTTCH----HHHHHHHHHHHHHHHHTTCEEEEEEECSCGG----------------GCHHHHHHHH
T ss_pred ----------CCCccccCh----HHHHHHHHHHHHHHHHCCCEEEEEcCCCCcc----------------ccHHHHHHHH
Confidence 00000 011 3689999999999999999999999986421 1268999999
Q ss_pred HHHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEE
Q 008330 195 TKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLV 274 (570)
Q Consensus 195 ~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlV 274 (570)
++||+|||++|+|+ |||+|||+.... ...|..++++++++||+++|+++|+|++..|+.+.......|+. ++++|
T Consensus 116 ~~~a~r~~~~p~V~-~el~NEP~~~~~-~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~~~~~~~~~~p~~---~~n~v 190 (293)
T 1tvn_A 116 EDVATKYGQYDNVI-YEIYNEPLQISW-VNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVDVASQNPID---RANIA 190 (293)
T ss_dssp HHHHHHHTTCTTEE-EECCSCCCSCCT-TTTHHHHHHHHHHHHHTTCCSCEEEECCHHHHTCHHHHHHSCCC---SSSEE
T ss_pred HHHHHHhCCCCeEE-EEccCCCCCCch-HHHHHHHHHHHHHHHHhhCCCCEEEECCCCcccccchhccCCCC---CCCEE
Confidence 99999999999998 999999987521 15789999999999999999999999998888776554444543 36899
Q ss_pred EEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC-cchHHHHHHHHHHHHHCCCceE
Q 008330 275 FEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN-VNDNRYLNCFFGVAAELDWDWA 353 (570)
Q Consensus 275 ys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~-~~~~~~~~~~~~~~~~~gigw~ 353 (570)
|++|.|.++.. ..+ .+...++.+.+.||+|||||+.+..+. ..+..+.+.++++++++++||+
T Consensus 191 ~s~H~Y~~~~~------------~~~----~~~~~~~~~~~~Pv~igEfG~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~ 254 (293)
T 1tvn_A 191 YTLHFYAGTHG------------QSY----RNKAQTALDNGIALFATEWGTVNADGNGGVNINETDAWMAFFKTNNISHA 254 (293)
T ss_dssp EEEEEETTTCC------------HHH----HHHHHHHHHTTCCEEEEEEESSCTTSCSCCCHHHHHHHHHHHHHHTCCEE
T ss_pred EEEEeCCCCch------------HHH----HHHHHHHHHCCCcEEEEcccCcCCCCCCCCCHHHHHHHHHHHHHCCCeeE
Confidence 99999987431 112 222334456799999999999775431 1234567788899999999999
Q ss_pred EeccCceeecccCccCCCceeeeecC--CCCC
Q 008330 354 LWTLVGSYYLREGVIGLNEYYGLFDW--NWCD 383 (570)
Q Consensus 354 ~W~~~G~y~~r~~~~~~~et~Gll~~--dw~~ 383 (570)
+|+|++ .++++|+++. +|.+
T Consensus 255 ~W~~~~----------~~~~~~~~~~~~~w~~ 276 (293)
T 1tvn_A 255 NWALND----------KNEGASLFTPGGSWNS 276 (293)
T ss_dssp EEEESC----------SSSTTCSBCTTCCTTS
T ss_pred EEecCC----------CCCceeEECCCCCccc
Confidence 999962 2478999985 4653
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=330.32 Aligned_cols=264 Identities=19% Similarity=0.174 Sum_probs=202.1
Q ss_pred CCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHH-HcCCcEEEecccccccccCccccchhhhh
Q 008330 37 LPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVV-DMGFNCVRLTWPLYLATNDSLASLTVRQS 115 (570)
Q Consensus 37 ~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~-~~GfN~VRlPi~~~~~~~~~~~n~tv~~s 115 (570)
.+|+|+|++|++ +|++|+|||||+.++.+.. |-.....+++++.|+ ++|||+||+|+.++. .
T Consensus 3 ~~l~v~g~~~~~-nG~~~~l~Gvn~~~~~~~~---~~~~~~~~~d~~~l~~~~G~N~vR~~~~~~~--~----------- 65 (291)
T 1egz_A 3 EPLSVNGNKIYA-GEKAKSFAGNSLFWSNNGW---GGEKFYTADTVASLKKDWKSSIVRAAMGVQE--S----------- 65 (291)
T ss_dssp CCEEEETTEEEE-TTEECCCEEEEEEECCTTS---SGGGGCSHHHHHHHHHTTCCCEEEEEEECSS--T-----------
T ss_pred CcEEecCCEEEE-CCCEEEEEEEeeccccccc---CCCccCCHHHHHHHHHHcCCCEEEEeccccc--c-----------
Confidence 579999999999 9999999999987543111 000112578899999 899999999998741 1
Q ss_pred hhhccchhhccCcccCCCCCCC-chHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHH
Q 008330 116 FQKLGLLEAIGGIQSNNPSIVD-LPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGL 194 (570)
Q Consensus 116 ~~~lg~~~~~~g~~~~nP~~~~-~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w 194 (570)
++.+.+ ...++.++++|++|.++|||||||+|...+. ...+.+.++|
T Consensus 66 ----------------~~~~~~~~~~~~~ld~~v~~a~~~Gi~vild~h~~~~~----------------~~~~~~~~~~ 113 (291)
T 1egz_A 66 ----------------GGYLQDPAGNKAKVERVVDAAIANDMYAIIGWHSHSAE----------------NNRSEAIRFF 113 (291)
T ss_dssp ----------------TSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCGG----------------GGHHHHHHHH
T ss_pred ----------------CCCcCCHHHHHHHHHHHHHHHHHCCCEEEEEcCCCCcc----------------hhHHHHHHHH
Confidence 111122 2479999999999999999999999985310 2368899999
Q ss_pred HHHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEE
Q 008330 195 TKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLV 274 (570)
Q Consensus 195 ~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlV 274 (570)
++||+|||++|+|+ |||+|||+... ..+.|..++++++++||+++|+++|++++..|+.++......|+. ++++|
T Consensus 114 ~~ia~r~~~~p~V~-~el~NEP~~~~-~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~~~~~~~~~~p~~---~~~~~ 188 (291)
T 1egz_A 114 QEMARKYGNKPNVI-YEIYNEPLQVS-WSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPIN---AKNIA 188 (291)
T ss_dssp HHHHHHHTTSTTEE-EECCSCCCSCC-TTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHHTCHHHHHTSCCC---SSSEE
T ss_pred HHHHHHhCCCCcEE-EEecCCCCCCc-hHHHHHHHHHHHHHHHHhcCCCCEEEECCCCcccccchhhcCCCC---CCCEE
Confidence 99999999999998 99999998752 124799999999999999999999999998887776554444432 36899
Q ss_pred EEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC-cchHHHHHHHHHHHHHCCCceE
Q 008330 275 FEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN-VNDNRYLNCFFGVAAELDWDWA 353 (570)
Q Consensus 275 ys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~-~~~~~~~~~~~~~~~~~gigw~ 353 (570)
|++|.|.++.. +. +.+...++.+.++||+|||||+.+..+. ..+..+.+.++++++++++||+
T Consensus 189 ~s~H~Y~~~~~------------~~----~~~~~~~~~~~~~Pv~igEfG~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~ 252 (291)
T 1egz_A 189 YTLHFYAGTHG------------ES----LRNKARQALNNGIALFVTEWGTVNADGNGGVNQTETDAWVTFMRDNNISNA 252 (291)
T ss_dssp EEEEEETTTCC------------HH----HHHHHHHHHHTTCCEEEEEEESSCTTSCSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEecCCCCh------------HH----HHHHHHHHHHCCCcEEEecccCcCCCCCCCcCHHHHHHHHHHHHHCCCeEE
Confidence 99999986421 11 2223344456899999999999775432 1234677888899999999999
Q ss_pred EeccCceeecccCccCCCceeeeecCC
Q 008330 354 LWTLVGSYYLREGVIGLNEYYGLFDWN 380 (570)
Q Consensus 354 ~W~~~G~y~~r~~~~~~~et~Gll~~d 380 (570)
+|+|++ .+|++|+++..
T Consensus 253 ~W~~~~----------~~~~~~~~~~~ 269 (291)
T 1egz_A 253 NWALND----------KNEGASTYYPD 269 (291)
T ss_dssp EEEECC----------SSSTTCSBCTT
T ss_pred EEecCC----------CCCccceecCC
Confidence 999962 24789999864
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-39 Score=330.06 Aligned_cols=252 Identities=18% Similarity=0.248 Sum_probs=192.2
Q ss_pred CCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhh
Q 008330 37 LPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSF 116 (570)
Q Consensus 37 ~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~ 116 (570)
.+|+|+|++|+|.+|++|+|||||+.+. |.....++++.||++|||+||||+.+... |.
T Consensus 2 ~~l~v~G~~i~d~nG~~~~l~Gvn~~~~---------w~~~~~~~~~~lk~~G~N~VRi~~~~~~~----w~-------- 60 (302)
T 1bqc_A 2 TGLHVKNGRLYEANGQEFIIRGVSHPHN---------WYPQHTQAFADIKSHGANTVRVVLSNGVR----WS-------- 60 (302)
T ss_dssp CCSEEETTEEECTTSCBCCCEEEEECTT---------TCTTCTTHHHHHHHTTCSEEEEEECCSSS----SC--------
T ss_pred CceEEeCCEEECCCCCEEEEEEeecccc---------cCcchHHHHHHHHHcCCCEEEEEccCCcc----cC--------
Confidence 4799999999999999999999998542 11112367899999999999999975311 10
Q ss_pred hhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHH
Q 008330 117 QKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTK 196 (570)
Q Consensus 117 ~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~ 196 (570)
...++.++++|++|.++|||||||+|...+ ++ .. .+ ....+++.++|++
T Consensus 61 ---------------------~~~~~~ld~~v~~a~~~Gi~Vild~h~~~~-~~-~~-------~~-~~~~~~~~~~w~~ 109 (302)
T 1bqc_A 61 ---------------------KNGPSDVANVISLCKQNRLICMLEVHDTTG-YG-EQ-------SG-ASTLDQAVDYWIE 109 (302)
T ss_dssp ---------------------CCCHHHHHHHHHHHHHTTCEEEEEEGGGTT-TT-TS-------TT-CCCHHHHHHHHHH
T ss_pred ---------------------CCCHHHHHHHHHHHHHCCCEEEEEeccCCC-CC-CC-------Cc-hhhHHHHHHHHHH
Confidence 013688999999999999999999998642 21 10 11 2457899999999
Q ss_pred HHHHhCCCCcEEEEeccCCCCCCCCC-hhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhh----cccCcCCCC
Q 008330 197 MATIFNGVRNVVGMSLRNELRGPKQN-VKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRN----QAVNLTFTG 271 (570)
Q Consensus 197 iA~ryk~~p~Vig~dL~NEP~~~~~~-~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~----~p~~l~~~~ 271 (570)
||+|||++|+|++|||+|||++.... ..+|..++++++++||+++|+++|+|++..|+.+++.+.. ..+..+..+
T Consensus 110 ia~~~k~~~~vv~~el~NEP~~~~~~~~~~w~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (302)
T 1bqc_A 110 LKSVLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDPTG 189 (302)
T ss_dssp THHHHTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTTTTCTTCHHHHHHHHHHHTCTTC
T ss_pred HHHHhcCCCCEEEEEeCCCCCCCCCcchhhHHHHHHHHHHHHHhcCCCcEEEECCCccccCchhhhhccchhccccCCCC
Confidence 99999999999999999999875311 1359999999999999999999999999999887654321 001112357
Q ss_pred CEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCCc
Q 008330 272 KLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWD 351 (570)
Q Consensus 272 nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gig 351 (570)
++||++|.|.+... ++.+... ...+.+.++||+|||||+...... .+++++++++++++++
T Consensus 190 ~~v~s~H~Y~~~~~-----------~~~~~~~----~~~~~~~~~Pv~igEfG~~~~~~~----~~~~~~~~~~~~~~i~ 250 (302)
T 1bqc_A 190 NTVFSIHMYGVYSQ-----------ASTITSY----LEHFVNAGLPLIIGEFGHDHSDGN----PDEDTIMAEAERLKLG 250 (302)
T ss_dssp CEEEEEEESGGGCS-----------HHHHHHH----HHHHHHHTCCEEEEEECCTTSTTC----CCHHHHHHHHHHHTCE
T ss_pred CEEEEEEEccCCCC-----------HHHHHHH----HHHHHHCCCCEEEEeecCCCCCCc----hHHHHHHHHHHHcCCE
Confidence 99999999986431 2233332 233455889999999999876532 2368899999999999
Q ss_pred eEEeccCc
Q 008330 352 WALWTLVG 359 (570)
Q Consensus 352 w~~W~~~G 359 (570)
|++|+|+|
T Consensus 251 ~~~W~~~~ 258 (302)
T 1bqc_A 251 YIGWSWSG 258 (302)
T ss_dssp EEESCSSC
T ss_pred EEEeeccC
Confidence 99999974
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-39 Score=335.86 Aligned_cols=258 Identities=17% Similarity=0.199 Sum_probs=196.1
Q ss_pred EEEEEeeCCCCCCccccCCCC------------------CChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhh
Q 008330 54 VKLACVNWVSHLEPVVAEGLS------------------KQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQS 115 (570)
Q Consensus 54 v~L~GVNw~g~~~~~v~~Gl~------------------~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s 115 (570)
++++|||++|.+......|.. ....+++++.|+++|||+||||+.|+.+.++
T Consensus 3 ~~~~gvn~~g~~fg~~~~g~~~~~~~~p~~~~~~~~~~~~~~t~~m~~~i~~~G~N~vRipi~w~~~~~~---------- 72 (340)
T 3qr3_A 3 VRFAGVNIAGFDFGCTTDGTCVTSKVYPPLKNFTGSNNYPDGIGQMQHFVNEDGMTIFRLPVGWQYLVNN---------- 72 (340)
T ss_dssp CSEEEEEEESTTTTBCTTSCBCGGGCCCSCTTSSSSSCSCCHHHHHHHHHHHHCCCEEEEEECHHHHTTT----------
T ss_pred cceEEEeccchhhCCCCCCCCCCcccCCChhhhcccccCCccHHHHHHHHHHCCCCEEEEEeeHHHhCCC----------
Confidence 468999999987533222321 1225788999999999999999998765431
Q ss_pred hhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHH
Q 008330 116 FQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLT 195 (570)
Q Consensus 116 ~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~ 195 (570)
..+...+.+++++|+++|++|.++|||||||+|+..+ |.. + ..++.....++++++|+
T Consensus 73 ---------------~~~g~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH~~~~-~~g-----~-~~~~~~~~~~~~~~~w~ 130 (340)
T 3qr3_A 73 ---------------NLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNYAR-WNG-----G-IIGQGGPTNAQFTSLWS 130 (340)
T ss_dssp ---------------CTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTE-ETT-----E-ETTTTSSCHHHHHHHHH
T ss_pred ---------------CCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCcc-cCC-----c-ccCCCHHHHHHHHHHHH
Confidence 0122345678999999999999999999999999763 321 1 11122246899999999
Q ss_pred HHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCC-cEEEEeCCCCCCcchhhh----h--cccCcC
Q 008330 196 KMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPE-VLVILSGLNFDKDLSFVR----N--QAVNLT 268 (570)
Q Consensus 196 ~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~-~lIiVeG~~w~~dl~~~~----~--~p~~l~ 268 (570)
+||+|||++++|+ |||+|||++. +.+.|.+++++++++||+++|+ ++|+|+|..|+++.+++. . ..++.+
T Consensus 131 ~iA~ryk~~~~Vi-~el~NEP~~~--~~~~w~~~~~~~i~aIR~~~~~~~~Iiv~g~~w~~~~~w~~~~~~~~l~~l~dP 207 (340)
T 3qr3_A 131 QLASKYASQSRVW-FGIMNEPHDV--NINTWAATVQEVVTAIRNAGATSQFISLPGNDWQSAGAFISDGSAAALSQVTNP 207 (340)
T ss_dssp HHHHHHTTCTTEE-EECCSCCCSS--CHHHHHHHHHHHHHHHHHTTCCSSCEEEECSGGGBTTTTTTTSHHHHHTTCCCT
T ss_pred HHHHHhCCCCcEE-EEecCCCCCC--CHHHHHHHHHHHHHHHHhhCCCccEEEEeCCcccccccccccccchhhcccCCC
Confidence 9999999999997 9999999986 5789999999999999999999 899999999988755431 1 122323
Q ss_pred C--CCCEEEEEeecCCCCCC----CCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHH
Q 008330 269 F--TGKLVFEAHWYGFTDGQ----AWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFF 342 (570)
Q Consensus 269 ~--~~nlVys~H~Y~~~~~~----~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~ 342 (570)
. ++|+||++|+|.++.+. .|.. ..+.+.++....++.++|+||||||||+... ..+.+++++++
T Consensus 208 ~~~~~nlvys~H~Y~~~~~sgt~~~~~~-------~~i~~~~~~~~~~~~~~g~pv~iGEfG~~~~---~~~~~~~~~~l 277 (340)
T 3qr3_A 208 DGSTTNLIFDVHKYLDSDNSGTHAECTT-------NNIDGAFSPLATWLRQNNRQAILTETGGGNV---QSCIQDMCQQI 277 (340)
T ss_dssp TSCCTTEEEEEECCCSTTSSSCSSSCCC-------CSTTTTHHHHHHHHHHTTCCEEEEEECCCSS---HHHHHHHHHHH
T ss_pred CCCCCCEEEEEEeCCCCCCCCCCcccch-------hhHHHHHHHHHHHHHHcCCcEEEeCccCCCC---hHHHHHHHHHH
Confidence 2 37999999999987752 1211 1222345555567778999999999999643 35689999999
Q ss_pred HHHHHCC---CceEEec
Q 008330 343 GVAAELD---WDWALWT 356 (570)
Q Consensus 343 ~~~~~~g---igw~~W~ 356 (570)
+++++++ ++|++|+
T Consensus 278 ~~~~~~~~~~~gw~~W~ 294 (340)
T 3qr3_A 278 QYLNQNSDVYLGYVGWG 294 (340)
T ss_dssp HHHHTTTTTEEEEEEEE
T ss_pred HHHHHcCCcceEEEEec
Confidence 9999999 7788887
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=340.37 Aligned_cols=292 Identities=14% Similarity=0.206 Sum_probs=212.4
Q ss_pred EEEeeCCCCCCc-cccCCC-CC-ChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCC
Q 008330 56 LACVNWVSHLEP-VVAEGL-SK-QPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNN 132 (570)
Q Consensus 56 L~GVNw~g~~~~-~v~~Gl-~~-~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~n 132 (570)
++|||+.++.+. ..+.+. |. ...+++++.|+++|||+||||+.++.+.++ .+
T Consensus 5 ~~G~Nlg~~~~~~~~~~~~~~~~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~-------------------------~~ 59 (343)
T 1ceo_A 5 KAGINLGGWISQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESD-------------------------DN 59 (343)
T ss_dssp SEEEECTTSBSSCSSCCHHHHHHHSCHHHHHHHHHHTCCEEEEEEEGGGTBCS-------------------------SS
T ss_pred cceeehhhhhccCCccchhhhhcccCHHHHHHHHHcCCCEEEecCCHHHhccc-------------------------cC
Confidence 689999877543 222221 11 124789999999999999999998766542 11
Q ss_pred CCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCC-CccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEe
Q 008330 133 PSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKP-GWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMS 211 (570)
Q Consensus 133 P~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~-~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~d 211 (570)
|...+.+.++.++++|++|.++||+||||+|..++ .|... ...++|.++ ...+++.++|++||+||++++.|++||
T Consensus 60 ~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh~~~g~~~~~~--~~~~~~~~~-~~~~~~~~~~~~ia~~~~~~~~v~~~e 136 (343)
T 1ceo_A 60 VGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHHAPGYRFQDF--KTSTLFEDP-NQQKRFVDIWRFLAKRYINEREHIAFE 136 (343)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEECCC----------CCTTTCH-HHHHHHHHHHHHHHHHTTTCCSSEEEE
T ss_pred CCcccHHHHHHHHHHHHHHHHCCCEEEEEecCCCccccCCC--CcccCcCCH-HHHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 22345678999999999999999999999999753 23211 112566654 246889999999999999999999999
Q ss_pred ccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEEEEEeecCCCCC----CC
Q 008330 212 LRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAHWYGFTDG----QA 287 (570)
Q Consensus 212 L~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlVys~H~Y~~~~~----~~ 287 (570)
|+|||+.. ....|..++++++++||+++|+++|+|+|..|+.. ..+.. +....++|+||++|.|.+..+ ..
T Consensus 137 l~NEP~~~--~~~~~~~~~~~~~~~IR~~~p~~~i~v~~~~~~~~-~~~~~--~~~~~~~~~v~~~H~Y~~~~ft~~~~~ 211 (343)
T 1ceo_A 137 LLNQVVEP--DSTRWNKLMLECIKAIREIDSTMWLYIGGNNYNSP-DELKN--LADIDDDYIVYNFHFYNPFFFTHQKAH 211 (343)
T ss_dssp CCSCCCCS--SSHHHHHHHHHHHHHHHHHCSSCCEEEECHHHHCG-GGGGG--SCCCCCSSEEEEEEECCSHHHHTTTCT
T ss_pred eccCCCCc--chHHHHHHHHHHHHHHHhhCCCCEEEEeCCCcCCH-HHHhh--cCcCCCCCEEEEeeccCccccCcCCCC
Confidence 99999986 35789999999999999999999999999888653 22221 111235799999999987533 13
Q ss_pred CCCC---------CCc-------------------------chhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcc
Q 008330 288 WVDG---------NPN-------------------------QVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVN 333 (570)
Q Consensus 288 w~~~---------~~~-------------------------~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~ 333 (570)
|... .+. ...+.+.+.+.....++.+.++||+|||||+....+...
T Consensus 212 w~~~~~~~~~~~~yp~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Pv~igEfG~~~~~~~~~ 291 (343)
T 1ceo_A 212 WSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMELNNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGVIAIADLES 291 (343)
T ss_dssp TCHHHHHHCCCCCSSEECCSHHHHHHHCGGGGGGGGGTTCEESHHHHHHHHHHHHHHHHHHCCEEEEEEECCCTTSCHHH
T ss_pred CCcccccccCCCCCCCcccchhhhhccchhhhhhhhccccccCHHHHHHHHHHHHHHHHHhCCCEEecccccccCCChHH
Confidence 4321 000 011224445555555666789999999999988654445
Q ss_pred hHHHHHHHHHHHHHCCCceEEeccCceeecccCccCCCceeeeecCCCCCccchhHHHHH
Q 008330 334 DNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLERI 393 (570)
Q Consensus 334 ~~~~~~~~~~~~~~~gigw~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~~~~~~~~~~~ 393 (570)
+.+|++++++++++++++|++|+++ ++.|||++.++..+. ++.++.|
T Consensus 292 ~~~~~~~~~~~~~~~~ig~~~W~~~------------~~~~gl~~~~~~~~~-~~~~~~l 338 (343)
T 1ceo_A 292 RIKWHEDYISLLEEYDIGGAVWNYK------------KMDFEIYNEDRKPVS-QELVNIL 338 (343)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCSB------------STTCCSBCTTSCBSC-HHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCeEEeecC------------CCCeeeecCCCcccC-HHHHHHH
Confidence 6799999999999999999999997 356999999876654 4444443
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=334.97 Aligned_cols=253 Identities=18% Similarity=0.296 Sum_probs=193.7
Q ss_pred CCCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHH-HcCCcEEEecccccccccCccccchhhh
Q 008330 36 GLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVV-DMGFNCVRLTWPLYLATNDSLASLTVRQ 114 (570)
Q Consensus 36 ~~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~-~~GfN~VRlPi~~~~~~~~~~~n~tv~~ 114 (570)
.++|+|+|++|+|++|++|+|||||+.++. ..+. ...+++++.|+ ++|||+||+|+.++. . .|
T Consensus 8 ~~~l~v~G~~i~d~~G~~v~l~Gvn~~~~~--w~~~----~~~~~d~~~l~~~~G~N~vRi~~~~~~--~-~~------- 71 (306)
T 2cks_A 8 YGKVQVCGTQLCDEHGNPVQLRGMSTHGIQ--WFDH----CLTDSSLDALAYDWKADIIRLSMYIQE--D-GY------- 71 (306)
T ss_dssp HCSCEEETTEEECTTSCBCCCEEEECCCHH--HHGG----GCSHHHHHHHHHTSCCSEEEEEEESST--T-SG-------
T ss_pred CCeEEEECCEEECCCCCEEEEEEEecCccc--ccCc----CCCHHHHHHHHHHcCCCEEEEEeeecC--C-Cc-------
Confidence 468999999999999999999999987642 1111 12357788786 699999999998641 1 01
Q ss_pred hhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHH
Q 008330 115 SFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGL 194 (570)
Q Consensus 115 s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w 194 (570)
..+| ..+++.+|++|++|.++|||||||+|...++ +..++.+++.++|
T Consensus 72 ---------------~~~~----~~~l~~ld~~v~~a~~~Gl~vild~h~~~~g-------------~~~~~~~~~~~~~ 119 (306)
T 2cks_A 72 ---------------ETNP----RGFTDRMHQLIDMATARGLYVIVDWHILTPG-------------DPHYNLDRAKTFF 119 (306)
T ss_dssp ---------------GGCH----HHHHHHHHHHHHHHHTTTCEEEEEEECCSSC-------------CGGGGHHHHHHHH
T ss_pred ---------------ccCH----HHHHHHHHHHHHHHHHCCCEEEEEecCCCCC-------------CcccCHHHHHHHH
Confidence 1111 1378999999999999999999999986432 1123578999999
Q ss_pred HHHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCC-------cchhhhhcccCc
Q 008330 195 TKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDK-------DLSFVRNQAVNL 267 (570)
Q Consensus 195 ~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~-------dl~~~~~~p~~l 267 (570)
++||+|||++|+|+ |||+|||+.. .+..|..++++++++||+++|+++|+|++..|+. ++..+...|+.
T Consensus 120 ~~ia~~y~~~~~V~-~el~NEP~~~--~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~~~~~~~~~~~~~p~~- 195 (306)
T 2cks_A 120 AEIAQRHASKTNVL-YEIANEPNGV--SWASIKSYAEEVIPVIRQRDPDSVIIVGTRGWSSLGVSEGSGPAEIAANPVN- 195 (306)
T ss_dssp HHHHHHHTTCSSEE-EECCSCCCSS--CHHHHHHHHHHHHHHHHHHCTTCCEEECCHHHHSTTGGGTCCTHHHHHSCCS-
T ss_pred HHHHHHhCCCCcEE-EEcCCCCCCC--CHHHHHHHHHHHHHHHHHhCCCCEEEECCCCccccccccccchhhhhcCCCC-
Confidence 99999999999998 9999999875 5778999999999999999999999999877654 34333344432
Q ss_pred CCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCC-CcchHHHHHHHHHHHH
Q 008330 268 TFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGN-NVNDNRYLNCFFGVAA 346 (570)
Q Consensus 268 ~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~-~~~~~~~~~~~~~~~~ 346 (570)
++|+||++|+|.+... +.+.+.+.. . ..++||||||||+....+ +..+..++++++++++
T Consensus 196 --~~~~v~s~H~Y~~~~~------------~~~~~~~~~----~-~~~~Pv~igEfG~~~~~g~~~~~~~~~~~~~~~~~ 256 (306)
T 2cks_A 196 --ASNIMYAFHFYAASHR------------DNYLNALRE----A-SELFPVFVTEFGTETYTGDGANDFQMADRYIDLMA 256 (306)
T ss_dssp --CSSEEEEEEEETTTCC------------HHHHHHHHH----H-HHHSCEEEEEEESSCTTSCSCCCHHHHHHHHHHHH
T ss_pred --cCCeEEEEeeCCCCcc------------HHHHHHHHH----H-hcCCcEEEEcccCCcCCCCCCcCHHHHHHHHHHHH
Confidence 3689999999987531 122223322 1 257899999999987532 2345678899999999
Q ss_pred HCCCceEEeccCc
Q 008330 347 ELDWDWALWTLVG 359 (570)
Q Consensus 347 ~~gigw~~W~~~G 359 (570)
+++++|++|+|++
T Consensus 257 ~~~ig~~~W~~~~ 269 (306)
T 2cks_A 257 ERKIGWTKWNYSD 269 (306)
T ss_dssp HHTCCEEEECCSC
T ss_pred HcCCCeEEEecCC
Confidence 9999999999963
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=329.67 Aligned_cols=279 Identities=18% Similarity=0.256 Sum_probs=214.1
Q ss_pred EEEEeeCCCCCCccccCCCCCC-hHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCC
Q 008330 55 KLACVNWVSHLEPVVAEGLSKQ-PMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNP 133 (570)
Q Consensus 55 ~L~GVNw~g~~~~~v~~Gl~~~-~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP 133 (570)
..+|+|..+.++.. .++.|.. ..+++++.|+++|||+||||++|..+.++ ..|
T Consensus 20 ~~~G~Nlg~~~~~~-~~~~w~~~~~~~d~~~l~~~G~n~vRi~i~w~~~~~~-------------------------~~~ 73 (320)
T 3nco_A 20 IGHGINMGNALEAP-VEGSWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISE-------------------------KYP 73 (320)
T ss_dssp HCEEEECCSSTTSS-STTTTSCCCCHHHHHHHHHHTCCEEEECCCGGGSBCS-------------------------STT
T ss_pred cCCccccCccccCC-CCCccCCcCCHHHHHHHHHCCCCEEEEeeehHHhcCC-------------------------CCC
Confidence 36899998776543 2445543 35899999999999999999998766431 122
Q ss_pred CCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEecc
Q 008330 134 SIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLR 213 (570)
Q Consensus 134 ~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~ 213 (570)
...+..+++.++++|++|.++||+||||+|+... +|.+.....+++.++|++||+||+++|+|++|||+
T Consensus 74 ~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~~~~-----------~~~~~~~~~~~~~~~~~~ia~~~~~~~~vv~~~l~ 142 (320)
T 3nco_A 74 YEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEE-----------LYQAPDKYGPVLVEIWKQVAQAFKDYPDKLFFEIF 142 (320)
T ss_dssp CCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHH-----------HHHCHHHHHHHHHHHHHHHHHHHTTSCTTEEEECC
T ss_pred CccCHHHHHHHHHHHHHHHHCCCEEEEEcCCCcc-----------cccCcHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Confidence 3346678999999999999999999999998542 12222123678999999999999999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEEEEEeecCCCCC----CCCC
Q 008330 214 NELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAHWYGFTDG----QAWV 289 (570)
Q Consensus 214 NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlVys~H~Y~~~~~----~~w~ 289 (570)
|||+... +.+.|..++++++++||+++|+++|+|++..|+.. ..+.. +.++.++++||++|.|.++.+ ..|.
T Consensus 143 NEP~~~~-~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~-~~~~~--~~~~~~~~~v~~~H~Y~~~~~~~~~~~w~ 218 (320)
T 3nco_A 143 NEPAQNL-TPTKWNELYPKVLGEIRKTNPSRIVIIDVPNWSNY-SYVRE--LKLVDDKNIIVSFHYYEPFNFTHQGAEWV 218 (320)
T ss_dssp SCCCTTS-CHHHHHHHHHHHHHHHHHHCSSCCEEEECSGGGBG-GGGGG--CCCCSCTTEEEEEEECCSHHHHTTTCTTS
T ss_pred cCCCCCC-CHHHHHHHHHHHHHHHHhcCCCcEEEECCCCcCch-hHHhc--CCCCCCCCeEEEEEecCCeeeEecccccc
Confidence 9999753 56889999999999999999999999999888763 22222 222336899999999987543 2454
Q ss_pred CCCCc---------chhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCCceEEeccCce
Q 008330 290 DGNPN---------QVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGS 360 (570)
Q Consensus 290 ~~~~~---------~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gigw~~W~~~G~ 360 (570)
..... ..++.+.+.+.....++.++++||+|||||+....+...+.+|++++++++++++++|++|+++
T Consensus 219 ~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~~~~~g~Pv~igEfG~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~W~~~-- 296 (320)
T 3nco_A 219 SPTLPIGVKWEGKDWEVEQIRNHFKYVSEWAKKNNVPIFLGEFGAYSKADMESRVKWTKTVRRIAEEFGFSLAYWEFC-- 296 (320)
T ss_dssp SSCCCSCCCCCCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCCTTSCHHHHHHHHHHHHHHHHHTTCEEEESCSS--
T ss_pred CCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCEEEeeeeeecCCCHHHHHHHHHHHHHHHHHcCCeEEEEecC--
Confidence 32110 1223455555555555666899999999999876554456789999999999999999999985
Q ss_pred eecccCccCCCceeeeecCCCCCccch
Q 008330 361 YYLREGVIGLNEYYGLFDWNWCDIRNS 387 (570)
Q Consensus 361 y~~r~~~~~~~et~Gll~~dw~~~~~~ 387 (570)
..||++++++.+++.+
T Consensus 297 -----------~~fG~~d~~~~~w~~~ 312 (320)
T 3nco_A 297 -----------AGFGLYDRWTKTWIEP 312 (320)
T ss_dssp -----------GGGCSEETTTTEECTT
T ss_pred -----------CCcceeeCCCCccCch
Confidence 2489999999999986
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=338.47 Aligned_cols=298 Identities=16% Similarity=0.169 Sum_probs=211.0
Q ss_pred eeCCCCCC-ccccCCCCCC--hHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCC
Q 008330 59 VNWVSHLE-PVVAEGLSKQ--PMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSI 135 (570)
Q Consensus 59 VNw~g~~~-~~v~~Gl~~~--~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~ 135 (570)
+||+|++. +...++.|.. ..+++++.|+++|||+||||++|..+.++ ..+..
T Consensus 42 ~~w~~~~~~~~~~e~~W~~~~~~~~di~~i~~~G~N~vRipi~w~~~~~~-------------------------~~~~~ 96 (376)
T 3ayr_A 42 IEYLNYEKDQTASETCWGNPKTTEDMFKVLIDNQFNVFRIPTTWSGHFGE-------------------------APDYK 96 (376)
T ss_dssp TTTSCGGGCTTGGGGTTSCCCCCHHHHHHHHHTTCCEEEECCCCTTSBCC-------------------------TTTCC
T ss_pred CccccccCCCCCCCCccCCCcCcHHHHHHHHHcCCCEEEEeeEChhhcCC-------------------------CCCCc
Confidence 44555432 2345777864 36899999999999999999998654321 01122
Q ss_pred CCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCC
Q 008330 136 VDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNE 215 (570)
Q Consensus 136 ~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NE 215 (570)
.+.+++++|+++|++|.++||+||||+|+.. |+... .+ ......+.|.++|++||+|||+++++++|||+||
T Consensus 97 ~~~~~l~~~~~vv~~a~~~Gi~vildlH~~~--~~~~~-~~-----~~~~~~~~~~~~w~~ia~~~~~~~~~v~~el~NE 168 (376)
T 3ayr_A 97 IDEKWLKRVHEVVDYPYKNGAFVILNLHHET--WNHAF-SE-----TLDTAKEILEKIWSQIAEEFKDYDEHLIFEGLNE 168 (376)
T ss_dssp BCHHHHHHHHHHHHHHHTTTCEEEEECCSCS--SCCSC-TT-----THHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSC
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEEECCCcc--ccccc-cc-----chHHHHHHHHHHHHHHHHHHcCCCceeeEEeecC
Confidence 4567899999999999999999999999963 53221 00 0001256889999999999999999899999999
Q ss_pred CCCCCC-------Ch---hHHHHHHHHHHHHHHhc---CCCcEEEEeCCCCCCcchhhhhcccCcCC-CCCEEEEEeecC
Q 008330 216 LRGPKQ-------NV---KDWYRYMQLGAEAVHAA---NPEVLVILSGLNFDKDLSFVRNQAVNLTF-TGKLVFEAHWYG 281 (570)
Q Consensus 216 P~~~~~-------~~---~~W~~~~~~~~~aIr~~---dp~~lIiVeG~~w~~dl~~~~~~p~~l~~-~~nlVys~H~Y~ 281 (570)
|+.... .. ..+..++++++++||++ +|+++|+|+|..++.+...+.. +..+. ++|+||++|+|.
T Consensus 169 P~~~~~~~~W~~~~~~~~~~l~~~~~~~~~aIR~~g~~np~~~Iiv~g~~~~~~~~~~~~--~~~p~~~~n~v~s~H~Y~ 246 (376)
T 3ayr_A 169 PRKNDTPVEWTGGDQEGWDAVNAMNAVFLKTVRSAGGNNPKRHLMIPPYAAACNENSFNN--FIFPEDDDKVIASVHAYA 246 (376)
T ss_dssp CCCTTSTTTTTTCCHHHHHHHHHHHHHHHHHHHTSSTTGGGCCEEECCGGGBCSHHHHHT--CCCCTTCTTEEEEEECCC
T ss_pred CCcCCCccccCCccHHHHHHHHHHHHHHHHHHHHcCCCCCCcEEEECCCccCcccccccc--ccCCCCCCCEEEEEeecC
Confidence 997531 12 23567889999999998 5668999998776544333322 22222 479999999999
Q ss_pred CCCC--C---CCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCCceEEec
Q 008330 282 FTDG--Q---AWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWT 356 (570)
Q Consensus 282 ~~~~--~---~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gigw~~W~ 356 (570)
++.+ + .|...........+...+.....++.+.++||||||||+....+...+.+|++++++++++++++|++|+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Pv~igEfG~~~~~~~~~~~~w~~~~~~~~~~~~ig~~~W~ 326 (376)
T 3ayr_A 247 PYNFALNNGEGAVDKFDAAGKRDLEWNINLMKKRFVDQGIPMILGEYGAMNRDNEEDRATWAEFYMEKVTAMGVPQIWWD 326 (376)
T ss_dssp SHHHHTCCSTTCCSSCCHHHHHHHHHHHHHHHHHTGGGTCCEEEEEECCCCSSCHHHHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred chhccccCCCCcccccChhhhhHHHHHHHHHHHHHHHcCCcEEEEccccCCCCCcHHHHHHHHHHHHHHHHCCCcEEEEC
Confidence 8543 1 2221111111112222233222344568999999999998876444467899999999999999999999
Q ss_pred cCceeecccCccCCCceeeeecCCCCCccchhHHHHHHhccc
Q 008330 357 LVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLERISSLQS 398 (570)
Q Consensus 357 ~~G~y~~r~~~~~~~et~Gll~~dw~~~~~~~~~~~~~~l~~ 398 (570)
++ .| .+.++.|||++++|.+++.|+++++|....+
T Consensus 327 ~g-~~------~g~~~~~g~~d~~~~~w~~~~~~~~l~~~~~ 361 (376)
T 3ayr_A 327 NG-VF------EGTGERFGLLDRKNLKIVYPTIVAALQKGRG 361 (376)
T ss_dssp CS-CC------SSSSCCCCCEETTTTEESCHHHHHHHHHHHT
T ss_pred CC-CC------CCCCccceeEeCCCCeeCCHHHHHHHHHhcC
Confidence 74 33 2346899999999999999998877755443
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=323.36 Aligned_cols=244 Identities=15% Similarity=0.223 Sum_probs=186.3
Q ss_pred eEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhh
Q 008330 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQK 118 (570)
Q Consensus 39 L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~ 118 (570)
|+|+|++|+|.+|++|+|||||+ ++.. ..+..+++++.|+++|||+||||+... ..|
T Consensus 2 l~v~G~~i~d~~G~~~~lrGvn~-~~~w-------~~~~~~~~~~~i~~~G~N~VRi~~~~~----~~~----------- 58 (294)
T 2whl_A 2 FSVDGNTLYDANGQPFVMRGINH-GHAW-------YKDTASTAIPAIAEQGANTIRIVLSDG----GQW----------- 58 (294)
T ss_dssp CEEETTEEECTTSCBCCCEEEEE-CGGG-------CGGGHHHHHHHHHHTTCSEEEEEECCS----SSS-----------
T ss_pred eEEECCEEECCCCCEEEEEEeec-cccc-------CCcchHHHHHHHHHcCCCEEEEEecCC----Ccc-----------
Confidence 89999999999999999999997 3210 012267889999999999999999731 001
Q ss_pred ccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 008330 119 LGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMA 198 (570)
Q Consensus 119 lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA 198 (570)
..+.+++++++|++|.++|||||||+|...+. ++ . ...+++.++|++||
T Consensus 59 ------------------~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~~------~~------~-~~~~~~~~~w~~ia 107 (294)
T 2whl_A 59 ------------------EKDDIDTIREVIELAEQNKMVAVVEVHDATGR------DS------R-SDLNRAVDYWIEMK 107 (294)
T ss_dssp ------------------CCCCHHHHHHHHHHHHTTTCEEEEEECTTTTC------CC------H-HHHHHHHHHHHHTH
T ss_pred ------------------CccHHHHHHHHHHHHHHCCCEEEEEeccCCCC------Cc------c-hhHHHHHHHHHHHH
Confidence 11358899999999999999999999986421 10 0 23678999999999
Q ss_pred HHhCCC-CcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhc---ccCcCCCCCEE
Q 008330 199 TIFNGV-RNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQ---AVNLTFTGKLV 274 (570)
Q Consensus 199 ~ryk~~-p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~---p~~l~~~~nlV 274 (570)
+|||++ +.| +|||+|||++.. +...|.+++++++++||+++|+++|+|++..|+.....+... .+..+..+|+|
T Consensus 108 ~~y~~~~~~v-~~el~NEP~~~~-~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~~~~~~~~~~~~~~~~~d~~~n~v 185 (294)
T 2whl_A 108 DALIGKEDTV-IINIANEWYGSW-DGSAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFNADPLKNTM 185 (294)
T ss_dssp HHHTTCTTTE-EEECCTTCCCSS-CHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTBTHHHHHHHHHHHHTCTTCCEE
T ss_pred HHHcCCCCeE-EEEecCCCCCCC-ChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCchhhhhhhhccccCCCcCCEE
Confidence 999999 556 699999999743 456799999999999999999999999999898754321111 01001236899
Q ss_pred EEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCCceEE
Q 008330 275 FEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWAL 354 (570)
Q Consensus 275 ys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gigw~~ 354 (570)
|++|.|.++.. . .+ .+.+...++.+.++||+|||||+... + .+++++++++++++++|++
T Consensus 186 ~s~H~Y~~~~~--------~--~~----~~~~~~~~~~~~~~Pv~igEfG~~~~-~-----~~~~~~~~~~~~~~i~w~~ 245 (294)
T 2whl_A 186 FSIHMYEYAGG--------D--AN----TVRSNIDRVIDQDLALVIGEFGHRHT-D-----VDEDTILSYSEETGTGWLA 245 (294)
T ss_dssp EEEEESTTTTS--------S--HH----HHHHHHHHHHTTTCCEEEEEECCCCC-C-----CCHHHHHHHHHHHTCEEEE
T ss_pred EEEEeccCCCC--------c--HH----HHHHHHHHHHHCCCCEEEEccCCCCC-C-----ccHHHHHHHHHHcCCeEEE
Confidence 99999975431 0 11 23333445566899999999999876 2 3468999999999999999
Q ss_pred eccC
Q 008330 355 WTLV 358 (570)
Q Consensus 355 W~~~ 358 (570)
|+|+
T Consensus 246 W~~~ 249 (294)
T 2whl_A 246 WSWK 249 (294)
T ss_dssp SCSS
T ss_pred EEec
Confidence 9997
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=331.54 Aligned_cols=287 Identities=19% Similarity=0.307 Sum_probs=213.6
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
++..+.++|||+.+.... +. +....+++++.|+++|||+||||+.++.+.++
T Consensus 14 ~~~~~~~~GvNlg~~~~~---~~-~~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~------------------------ 65 (341)
T 1vjz_A 14 NNTIPRWRGFNLLEAFSI---KS-TGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDR------------------------ 65 (341)
T ss_dssp ---CCCCEEEECCTTSST---TC-CCCCCHHHHHHHHHTTCCEEEEEEEGGGTSCS------------------------
T ss_pred cccccccceecccccccC---CC-CCCCCHHHHHHHHHcCCCEEEeeCCHHHhcCC------------------------
Confidence 566678999999766432 21 13456899999999999999999998765431
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccC--CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-Cc
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSN--SDGNGFFGDQYFNPDLWIKGLTKMATIFNGV-RN 206 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~--~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~-p~ 206 (570)
.+|...+.+.++.|+++|++|.++||+||||+|.. |+|+... .+...+|.+. ...+.+.++|++||+||+++ |+
T Consensus 66 -~~p~~~~~~~~~~ld~~v~~a~~~Gi~vildlh~~-pg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ia~ry~~~~~~ 142 (341)
T 1vjz_A 66 -GNPFIIREDFFEKIDRVIFWGEKYGIHICISLHRA-PGYSVNKEVEEKTNLWKDE-TAQEAFIHHWSFIARRYKGISST 142 (341)
T ss_dssp -SCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEEEE-TTEESCTTSCCSSCTTTCH-HHHHHHHHHHHHHHHHHTTSCTT
T ss_pred -CCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEecCC-CCcccccCCCccccccCCH-HHHHHHHHHHHHHHHHHhcCCCC
Confidence 12344566789999999999999999999999996 4553221 1123566654 24788999999999999999 99
Q ss_pred EEEEeccCCCCCCCC---ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEEEEEeecCCC
Q 008330 207 VVGMSLRNELRGPKQ---NVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAHWYGFT 283 (570)
Q Consensus 207 Vig~dL~NEP~~~~~---~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlVys~H~Y~~~ 283 (570)
|++|||+|||+.... +.+.|..++++++++||+++|+++|+|+|..|+. ..+.. +. ++|+||++|.|.+.
T Consensus 143 v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~v~g~~~~~--~~~~~----l~-~~n~v~s~H~Y~~~ 215 (341)
T 1vjz_A 143 HLSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLGYGN--IPVDD----LT-IENTVQSCRGYIPF 215 (341)
T ss_dssp TEEEECSSCCCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCEEEECHHHHT--BCCTT----CC-CSSEEEEEEECCSH
T ss_pred eEEEEeccCCCCCCcccccHHHHHHHHHHHHHHHHhhCCCcEEEEcCCcCCc--ccccc----cC-CCCeEEEEeeccCc
Confidence 999999999997632 3478999999999999999999999999987765 22221 23 57999999999875
Q ss_pred CC----CCCCCCC-------Cc-------chhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHH
Q 008330 284 DG----QAWVDGN-------PN-------QVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVA 345 (570)
Q Consensus 284 ~~----~~w~~~~-------~~-------~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~ 345 (570)
.+ .+|.... +. .....+.+.+.....++. .++||+|||||+..........+|++++++++
T Consensus 216 ~~~~~~~~w~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~-~g~Pv~igEfG~~~~~~~~~~~~~~~~~~~~~ 294 (341)
T 1vjz_A 216 SVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIKLRQ-KGIEVFCGEMGAYNKTPHDVVLKWLEDLLEIF 294 (341)
T ss_dssp HHHSTTCTTTTCTTCCCCCSSSEEETTEEECHHHHHHHHHHHHGGGG-GTCEEEEEEECCCTTSCHHHHHHHHHHHHHHH
T ss_pred cccccCcccccccccCCCCCCCcccccchhhHHHHHHHHHHHHHHHH-hCCCeEEeccccccCCChHHHHHHHHHHHHHH
Confidence 42 2455321 00 011234445544333433 89999999999987654334569999999999
Q ss_pred HHCCCceEEeccCceeecccCccCCCceeeeecCCCCCccchh
Q 008330 346 AELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSS 388 (570)
Q Consensus 346 ~~~gigw~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~~~~~~ 388 (570)
+++++||++|++++ .|||++.++.++++++
T Consensus 295 ~~~~~g~~~W~~~~-------------~~Gl~~~~~~~~~~~~ 324 (341)
T 1vjz_A 295 KTLNIGFALWNFRG-------------PFGILDSERKDVEYEE 324 (341)
T ss_dssp HHTTCEEEESCSBS-------------TTSSBSCCCTTCCCEE
T ss_pred HHcCCceEEEecCC-------------CcceecCCCCcccccc
Confidence 99999999999962 3899999998887653
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=344.84 Aligned_cols=305 Identities=16% Similarity=0.199 Sum_probs=206.1
Q ss_pred CCCCCCCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHH-HHHHHcCCcEEEecccccccccCccccc
Q 008330 32 KPAIGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLS-KRVVDMGFNCVRLTWPLYLATNDSLASL 110 (570)
Q Consensus 32 ~~~~~~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~-~~i~~~GfN~VRlPi~~~~~~~~~~~n~ 110 (570)
+++....++++|++|+|.+|++|.|+|||+.+.... .+.|+. ...++++ +.|+++|||+||||+.|..+++
T Consensus 23 ~~~~~~~~~~~g~~i~d~~G~~~~l~GvN~~~~~~~-~~~g~~-~~~~~di~~~l~~~G~N~VRl~v~w~~~~p------ 94 (481)
T 2osx_A 23 GSGSGSGTALTPSYLKDDDGRSLILRGFNTASSAKS-APDGMP-QFTEADLAREYADMGTNFVRFLISWRSVEP------ 94 (481)
T ss_dssp ----------CCCCCBCTTCCEECCEEEEECGGGGT-CTTSCC-SCCHHHHHHHHHHHCCCEEEEEECHHHHCS------
T ss_pred CCCCCcccccCCCeEECCCCCEEEeeeEecCCCCCC-CCCCCc-cccHHHHHHHHHHCCCCEEEEeCcHHHcCC------
Confidence 333445699999999999999999999999875421 234442 3356777 9999999999999999876543
Q ss_pred hhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCC-------C---------------CC
Q 008330 111 TVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHIS-------K---------------PG 168 (570)
Q Consensus 111 tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~-------~---------------~~ 168 (570)
+|..++.++++.++++|++|.++||+||||+|.. + |.
T Consensus 95 ---------------------~~g~~~~~~l~~l~~~v~~a~~~Gi~vildlH~d~~~~~~~P~~~~~ng~~~gg~g~P~ 153 (481)
T 2osx_A 95 ---------------------APGVYDQQYLDRVEDRVGWYAERGYKVMLDMHQDVYSGAITPEGNSGNGAGAIGNGAPA 153 (481)
T ss_dssp ---------------------BTTBCCHHHHHHHHHHHHHHHHTTCEEEEEECCBSSCGGGSTTTCSBTTBCSSSBSSCG
T ss_pred ---------------------CCCCcCHHHHHHHHHHHHHHHHCCCEEEEEccccccccccccccccccccccCCCCCcc
Confidence 1233467899999999999999999999999972 1 12
Q ss_pred ccccCC----CCCC-----------------CCCCC---CCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCC---
Q 008330 169 WCCSNS----DGNG-----------------FFGDQ---YFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQ--- 221 (570)
Q Consensus 169 w~~~~~----dgng-----------------~~~d~---~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~--- 221 (570)
|..... +.++ ||.+. ....+++.++|++||+|||++|+|++|||+|||+....
T Consensus 154 W~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~la~ryk~~p~Vi~~el~NEP~~~~~~~~ 233 (481)
T 2osx_A 154 WATYMDGLPVEPQPRWELYYIQPGVMRAFDNFWNTTGKHPELVEHYAKAWRAVADRFADNDAVVAYDLMNEPFGGSLQGP 233 (481)
T ss_dssp GGCCCTTCCCCCCSSGGGGGGSHHHHHHHHHHTTTTSSCTHHHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCTTCCTH
T ss_pred ceeccCCCCccccccchhhccchhhHHHHHHHhccccCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEeecCCCCCCCCCc
Confidence 221000 0000 11110 11257899999999999999999999999999987521
Q ss_pred --ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhh-cccCcC--CCCCEEEEEeecCCCCC--CCCCCCCCc
Q 008330 222 --NVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRN-QAVNLT--FTGKLVFEAHWYGFTDG--QAWVDGNPN 294 (570)
Q Consensus 222 --~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~-~p~~l~--~~~nlVys~H~Y~~~~~--~~w~~~~~~ 294 (570)
+.+.|..++++++++||+++|+++|+|++..|+.+...... .++..+ ..+++||++|+|.+... ..|... .
T Consensus 234 ~~~~~~l~~~~~~~~~aIR~~dp~~~I~v~~~~~~~~~~~~~~l~~~~~p~~~~~~~v~s~H~Y~~~~~~~~~~~~~--~ 311 (481)
T 2osx_A 234 AFEAGPLAAMYQRTTDAIRQVDQDTWVCVAPQAIGVNQGLPSGLTKIDDPRAGQQRIAYCPHLYPLPLDIGDGHEGL--A 311 (481)
T ss_dssp HHHTTHHHHHHHHHHHHHTTTCSSSEEEECCCSTTGGGTCCCCCCCCCCCSSSSCCEEECCBCCCHHHHHTTSSSHH--H
T ss_pred cccHHHHHHHHHHHHHHHHhhCCCcEEEEcCcccccccCCCCCCcccCCCcccCCCEEEEEEecCcccccCCccCcc--c
Confidence 13568889999999999999999999999887654311000 111111 24789999999986411 122110 0
Q ss_pred chh--hHHHHHHHHHHHHHHhc-CCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCCceEEeccCceeecccCccCCC
Q 008330 295 QVC--GRVVDNVMRLSGFLLEQ-GWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLN 371 (570)
Q Consensus 295 ~~~--~~~~~~~~~~~g~l~~~-g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gigw~~W~~~G~y~~r~~~~~~~ 371 (570)
..| ..+...+.....++.+. ++||+|||||..... ....+|++++++++++++++|++|+++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~g~Pv~igEfG~~~~~--~~~~~~~~~~~~~~~~~~ig~~~W~~~~------------ 377 (481)
T 2osx_A 312 RTLTDVTIDAWRANTAHTARVLGDVPIILGSFGLDTTL--PGARDYIERVYGTAREMGAGVSYWSSDP------------ 377 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCBEECBCCCCTTS--TTHHHHHHHHHHHHHHHTCEEEESCCSS------------
T ss_pred hhhHHHHHHHHHHHHHHHHHHhcCCCEEEeccCCCCCc--hHHHHHHHHHHHHHHHcCCCeEEECCCC------------
Confidence 111 11222222223344457 999999999976432 2467899999999999999999999961
Q ss_pred ceeeeecCCC
Q 008330 372 EYYGLFDWNW 381 (570)
Q Consensus 372 et~Gll~~dw 381 (570)
..||+++.+.
T Consensus 378 g~~G~~~~~g 387 (481)
T 2osx_A 378 GPWGPYLPDG 387 (481)
T ss_dssp STTSSBCTTS
T ss_pred CCCCccCCCC
Confidence 1378887664
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=331.31 Aligned_cols=276 Identities=17% Similarity=0.162 Sum_probs=204.4
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|||+||||+.|..+.++ .+...+..++++++++|++|.++||+
T Consensus 63 ~~~di~~i~~~G~n~vRipv~w~~~~~~--------------------------~~~~~~~~~l~~l~~~v~~a~~~Gi~ 116 (380)
T 1edg_A 63 TKQMIDAIKQKGFNTVRIPVSWHPHVSG--------------------------SDYKISDVWMNRVQEVVNYCIDNKMY 116 (380)
T ss_dssp CHHHHHHHHHHTCCEEEECCCCGGGEET--------------------------TTTEECHHHHHHHHHHHHHHHTTTCE
T ss_pred cHHHHHHHHHcCCCEEEecccHHhhcCC--------------------------CCCcCCHHHHHHHHHHHHHHHHCCCE
Confidence 5889999999999999999998655421 01113456899999999999999999
Q ss_pred EEEecCCCCCCccccCCCCCCCCCCCCCCHHHH-HHHHHHHHHHhCCCCcEEEEeccCCCCCCCC--Ch-----------
Q 008330 158 VILDNHISKPGWCCSNSDGNGFFGDQYFNPDLW-IKGLTKMATIFNGVRNVVGMSLRNELRGPKQ--NV----------- 223 (570)
Q Consensus 158 VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~-~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~--~~----------- 223 (570)
||||+|+.. +|.... ..+. +.....+++ .++|++||+|||++++|++|||+|||+.... .+
T Consensus 117 vild~H~~~-~w~~~~---~~~~-~~~~~~~~~~~~~w~~ia~~~~~~~~v~~~el~NEP~~~~~~~~W~~~~~~g~~~~ 191 (380)
T 1edg_A 117 VILNTHHDV-DKVKGY---FPSS-QYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVD 191 (380)
T ss_dssp EEEECCSCB-CTTTSB---CSSG-GGHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHH
T ss_pred EEEeCCCch-hhhcCC---CCcc-ccHHHHHHHHHHHHHHHHHHhCCCCCEEEEEecCCCCcCCCCcccccccCCCchHH
Confidence 999999974 564321 0011 111236788 9999999999999999999999999987531 11
Q ss_pred --hHHHHHHHHHHHHHHhc---CCCcEEEEeCCCCCCcchhhhhcccCcCCC-----CCEEEEEeecCCCCC-C------
Q 008330 224 --KDWYRYMQLGAEAVHAA---NPEVLVILSGLNFDKDLSFVRNQAVNLTFT-----GKLVFEAHWYGFTDG-Q------ 286 (570)
Q Consensus 224 --~~W~~~~~~~~~aIr~~---dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~-----~nlVys~H~Y~~~~~-~------ 286 (570)
+.+..++++++++||++ ||+++|+|+|..|+.+...+.. +.++.+ +|+||++|+|.++.+ +
T Consensus 192 ~~~~l~~~~~~~~~~IR~~g~~np~~~Iiv~g~~~~~~~~~~~~--~~~p~d~~~~~~n~v~s~H~Y~~~~f~~~~~~~~ 269 (380)
T 1edg_A 192 SINCINQLNQDFVNTVRATGGKNASRYLMCPGYVASPDGATNDY--FRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADG 269 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHTCGGGGTSCEEEECGGGCHHHHHSTT--CCCCCCCTTCCSCEEEEEECCCSHHHHTSCGGGT
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEECCCcCCcccccccc--ccCCCCCccccCcEEEEEeecCCcccccccccCC
Confidence 34478899999999999 6999999999888765433222 222322 499999999997543 1
Q ss_pred ---CCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCCceEEeccCceeec
Q 008330 287 ---AWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYYL 363 (570)
Q Consensus 287 ---~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gigw~~W~~~G~y~~ 363 (570)
.|... .....+.+...++....++.+.++||+|||||+....+...+.+|++++++++++++++|++|+++ .|
T Consensus 270 g~~~w~~~-~~~~~~~i~~~~~~~~~~~~~~g~Pv~igEfG~~~~~~~~~~~~~~~~~~~~~~~~gig~~~W~~g-~~-- 345 (380)
T 1edg_A 270 GTNAWNIN-DSKDQSEVTWFMDNIYNKYTSRGIPVIIGECGAVDKNNLKTRVEYMSYYVAQAKARGILCILWDNN-NF-- 345 (380)
T ss_dssp CCCCCCTT-CHHHHHHHHHHHHHHHHHTGGGTCCEEEEEECCCCSSCHHHHHHHHHHHHHHHHHTTCEEEECCCC-CC--
T ss_pred CCCccCCC-chhhHHHHHHHHHHHHHHHHHcCCCEEEEeccCCCCCChHHHHHHHHHHHHHHHHCCCceEEECCC-CC--
Confidence 12110 011123455555555556677899999999999887544456789999999999999999999974 32
Q ss_pred ccCccCCCceeeeecCCCCCccchhHHHHHH
Q 008330 364 REGVIGLNEYYGLFDWNWCDIRNSSFLERIS 394 (570)
Q Consensus 364 r~~~~~~~et~Gll~~dw~~~~~~~~~~~~~ 394 (570)
.+.+|+||++++++.+++.+++++.|.
T Consensus 346 ----~g~~e~~g~~~~~~~~~~~~~~~~~l~ 372 (380)
T 1edg_A 346 ----SGTGELFGFFDRRSCQFKFPEIIDGMV 372 (380)
T ss_dssp ----SSSSCCCCCEETTTTEESSHHHHHHHH
T ss_pred ----CCCCcceeEEECCCCccCCHHHHHHHH
Confidence 334689999999999999998776554
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=337.42 Aligned_cols=276 Identities=15% Similarity=0.220 Sum_probs=201.7
Q ss_pred CCCCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhh
Q 008330 35 IGLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQ 114 (570)
Q Consensus 35 ~~~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~ 114 (570)
+..+|+|+|++|+|.+|++|+|||||+. +. +.....+++++.|+++|||+||||+... ..|
T Consensus 6 ~~~~l~v~G~~i~d~nG~~v~lrGvN~~-~~-------W~~~~~~~di~~ik~~G~N~VRipv~~g----~~~------- 66 (464)
T 1wky_A 6 ANSGFYVSGTTLYDANGNPFVMRGINHG-HA-------WYKDQATTAIEGIANTGANTVRIVLSDG----GQW------- 66 (464)
T ss_dssp --CCCEEETTEEECTTSCBCCCEEEEEC-GG-------GCGGGHHHHHHHHHTTTCSEEEEEECCS----SSS-------
T ss_pred CCCCeEEeCCEEECCCCCEEEEEEEEeC-cc-------cCCcchHHHHHHHHHCCCCEEEEEcCCC----Ccc-------
Confidence 4578999999999999999999999973 21 1112267899999999999999999621 001
Q ss_pred hhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHH
Q 008330 115 SFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGL 194 (570)
Q Consensus 115 s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w 194 (570)
..+.+++++++|++|.++|||||||+|...+. +. . ...+++.++|
T Consensus 67 ----------------------~~~~l~~ld~vv~~a~~~Gl~VIlDlH~~~g~------~~------~-~~~~~~~~~w 111 (464)
T 1wky_A 67 ----------------------TKDDIQTVRNLISLAEDNNLVAVLEVHDATGY------DS------I-ASLNRAVDYW 111 (464)
T ss_dssp ----------------------CCCCHHHHHHHHHHHHHTTCEEEEEECTTTTC------CC------H-HHHHHHHHHH
T ss_pred ----------------------CHHHHHHHHHHHHHHHHCCCEEEEEecCCCCC------CC------h-HHHHHHHHHH
Confidence 12368999999999999999999999986421 10 1 2368899999
Q ss_pred HHHHHHhCCC-CcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhc---ccCcCCC
Q 008330 195 TKMATIFNGV-RNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQ---AVNLTFT 270 (570)
Q Consensus 195 ~~iA~ryk~~-p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~---p~~l~~~ 270 (570)
++||+|||++ +.| +|||+|||++.. +...|.+++++++++||+++|+++|+|++..|+.....+... .+..+..
T Consensus 112 ~~iA~ryk~~~~~V-i~eL~NEP~~~~-~~~~w~~~~~~~i~aIR~~dp~~~I~v~g~~w~~~~~~~~~~~~~l~~~dp~ 189 (464)
T 1wky_A 112 IEMRSALIGKEDTV-IINIANEWFGSW-DGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNADPQ 189 (464)
T ss_dssp HHTGGGTTTCTTTE-EEECCTTCCCSS-CHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTBTHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHcCCCCeE-EEEeccCCCCCC-CHHHHHHHHHHHHHHHHhcCCCCEEEEcCCCcCcccccccccchhccccCCC
Confidence 9999999999 556 699999999753 456899999999999999999999999999998754322110 0001124
Q ss_pred CCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCC
Q 008330 271 GKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDW 350 (570)
Q Consensus 271 ~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gi 350 (570)
+|+||++|+|.++.. ..+ .+.+...++.+.++||||||||+....+.. ..++++++++++++
T Consensus 190 ~niv~s~H~Y~~~g~----------~~~----~i~~~~~~~~~~g~Pv~igEfG~~~~~~~~----~~~~~~~~~~~~~i 251 (464)
T 1wky_A 190 RNTMFSIHMYEYAGG----------NAS----QVRTNIDRVLNQDLALVIGEFGHRHTNGDV----DESTIMSYSEQRGV 251 (464)
T ss_dssp CCEEEEEEESTTTSS----------SHH----HHHHHHHHHHTTTCCEEEEEECSEETTEEC----CHHHHHHHHHHTTC
T ss_pred CCEEEEEEEECCCCC----------CHH----HHHHHHHHHHHcCCCEEEECccCCCCCCcH----HHHHHHHHHHHcCC
Confidence 799999999986431 112 233344455668999999999998754221 24899999999999
Q ss_pred ceEEeccCceeecccCccCCCceeeee--cCCCCCccchhHHHHHH
Q 008330 351 DWALWTLVGSYYLREGVIGLNEYYGLF--DWNWCDIRNSSFLERIS 394 (570)
Q Consensus 351 gw~~W~~~G~y~~r~~~~~~~et~Gll--~~dw~~~~~~~~~~~~~ 394 (570)
+|++|+|++. ++..+.| ..+|......++.+.+.
T Consensus 252 gw~~W~~~~~----------~~~~~~l~~~~~w~~~~lt~~G~~~~ 287 (464)
T 1wky_A 252 GWLAWSWKGN----------GPEWEYLDLSNDWAGNNLTAWGNTIV 287 (464)
T ss_dssp EEEESCSSCC----------CGGGGGGCSBSSTTSSSBCHHHHHHH
T ss_pred eEEEEEEcCC----------CCCcccccccccCCccccCHHHHHHH
Confidence 9999999732 2223333 34777765555555554
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-35 Score=319.47 Aligned_cols=255 Identities=16% Similarity=0.105 Sum_probs=179.5
Q ss_pred CCCCCCeEecCCeEEcCCCCEEEEEEe--eCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccc
Q 008330 33 PAIGLPLSTNSRWIVDENGHRVKLACV--NWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASL 110 (570)
Q Consensus 33 ~~~~~~L~t~G~~IVd~~G~~v~L~GV--Nw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~ 110 (570)
.....+|+|+|++|||.+|++ |||| |+.++. + ..+++++.|+++|||+||||+.+.... |.+.
T Consensus 6 ~~~~~~l~v~G~~ivd~~G~~--lrGv~~~~~w~~--------~--~~~~d~~~i~~~G~N~VRipv~~~~~~---~~~~ 70 (491)
T 2y8k_A 6 QRGRPRLNAARTTFVGDNGQP--LRGPYTSTEWTA--------A--APYDQIARVKELGFNAVHLYAECFDPR---YPAP 70 (491)
T ss_dssp CCCCCEECTTSSSEECTTSCB--CEEEEEECSSSC--------C--CCHHHHGGGGGGTCCEEEEEEEECCTT---TTST
T ss_pred CCCCceEEeCCCEEECCCCCE--eecccccCCcCC--------C--CCHHHHHHHHHcCCCEEEECceeeccc---ccCC
Confidence 344578999999999999999 9999 665432 1 245789999999999999999753210 1000
Q ss_pred hhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHH
Q 008330 111 TVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLW 190 (570)
Q Consensus 111 tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~ 190 (570)
+ ..+|. ..+++||++|++|.++|||||||+|.... .++ .+++++
T Consensus 71 ----------------~--~~~~~----~~l~~ld~vv~~a~~~Gl~VIlD~H~~~~----------~~~----~~~~~~ 114 (491)
T 2y8k_A 71 ----------------G--SKAPG----YAVNEIDKIVERTRELGLYLVITIGNGAN----------NGN----HNAQWA 114 (491)
T ss_dssp ----------------T--CCCTT----TTHHHHHHHHHHHHHHTCEEEEEEECTTC----------TTC----CCHHHH
T ss_pred ----------------C--ccChh----HHHHHHHHHHHHHHHCCCEEEEECCCCCC----------Ccc----ccHHHH
Confidence 0 11221 24899999999999999999999997321 111 347899
Q ss_pred HHHHHHHHHHhCCCCcEEEEeccCCCCCCCC-Ch------hHHHHHHHHHHHHHHhcCCCcEEEEeCCC-------CCCc
Q 008330 191 IKGLTKMATIFNGVRNVVGMSLRNELRGPKQ-NV------KDWYRYMQLGAEAVHAANPEVLVILSGLN-------FDKD 256 (570)
Q Consensus 191 ~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~-~~------~~W~~~~~~~~~aIr~~dp~~lIiVeG~~-------w~~d 256 (570)
+++|++||+|||++|+|+ |||+|||+.... .. ..|.+++++++++||+++|+++|+|+|.. |...
T Consensus 115 ~~~w~~iA~ryk~~p~Vi-~el~NEP~~w~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~g~~~~~g~~~~~~~ 193 (491)
T 2y8k_A 115 RDFWKFYAPRYAKETHVL-YEIHNEPVAWGPPYSSSTANPPGAVDMEIDVYRIIRTYAPETPVLLFSYAVFGGKGGAAEA 193 (491)
T ss_dssp HHHHHHHHHHHTTCTTEE-EECCSSCSSSCSCTTSTTSSSTTHHHHHHHHHHHHHHHCTTSCEEEEEESCCCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCceE-EEeecCCCCCCCccccccccHHHHHHHHHHHHHHHHhhCCCcEEEEecccccCCCcccchh
Confidence 999999999999999998 999999985211 11 23999999999999999999999998752 2221
Q ss_pred chhhh--hcccC--cC-CCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC
Q 008330 257 LSFVR--NQAVN--LT-FTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN 331 (570)
Q Consensus 257 l~~~~--~~p~~--l~-~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~ 331 (570)
+..+. ..++. .+ ..+|+||++|.|.+.. ..+ +.+. .+.+.++||||||||+......
T Consensus 194 ~~~l~~~~~~~~~~~~~~~~n~v~s~H~Y~~~~----------~~~----~~l~----~~~~~g~Pv~igEfG~~~~~~~ 255 (491)
T 2y8k_A 194 LKDIRAFNKAVFGNENAVWTNEAVAFHGYAGWQ----------ETT----IAVE----ELLKAGYPCFMTEYAGGAWGSG 255 (491)
T ss_dssp HHHHHHHHHHHHSSTTCCCSSEEEEEESTTCHH----------HHH----HHHH----HHHHTTCCEEEEECCCC--CCS
T ss_pred hcccccccccccccCCCCCCceeEEEeeCCCCc----------ccH----HHHH----HHHHcCCCEEEEeecccccCCC
Confidence 22221 11210 01 1368999999998532 111 2222 2346889999999998761111
Q ss_pred cchHHHHHHHHHHHHHCCCceEEeccCc
Q 008330 332 VNDNRYLNCFFGVAAELDWDWALWTLVG 359 (570)
Q Consensus 332 ~~~~~~~~~~~~~~~~~gigw~~W~~~G 359 (570)
+..|...+++++++++|+|++|+|++
T Consensus 256 --~~~~~~~~~~~~~~~~i~w~~W~~~~ 281 (491)
T 2y8k_A 256 --MGGLDVELTYELERLGVSWLTFQYIP 281 (491)
T ss_dssp --CSSCCHHHHHHHHHHTCEEEEEEECT
T ss_pred --CcchhHHHHHHHHhcCcceEEEeccC
Confidence 12233467789999999999999973
|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-32 Score=290.45 Aligned_cols=243 Identities=16% Similarity=0.203 Sum_probs=167.3
Q ss_pred HHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEE
Q 008330 79 DMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~V 158 (570)
+++++.|+++|||+||||+.++.+.+. ..+|... ..+++||++|++|.++||+|
T Consensus 76 e~D~~~ik~~G~N~VRipi~~~~~~~~------------------------~~~py~~--~~~~~ld~vV~~a~~~Gl~V 129 (399)
T 3n9k_A 76 EQDFKQISNLGLNFVRIPIGYWAFQLL------------------------DNDPYVQ--GQVQYLEKALGWARKNNIRV 129 (399)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGTCCC------------------------TTCCCCC--CHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCCCEEEEcccHHHccCC------------------------CCCccch--hHHHHHHHHHHHHHHCCCEE
Confidence 678999999999999999998766431 1133322 26899999999999999999
Q ss_pred EEecCCCCCCc----cccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC---CcEEEEeccCCCCCCCCChhHHHHHHH
Q 008330 159 ILDNHISKPGW----CCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGV---RNVVGMSLRNELRGPKQNVKDWYRYMQ 231 (570)
Q Consensus 159 ILD~H~~~~~w----~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~---p~Vig~dL~NEP~~~~~~~~~W~~~~~ 231 (570)
|||+|..++.. .++..+...|..+. ..++++++|++||+||+++ |+|++|||+|||+.+..+...|..+++
T Consensus 130 ILDlH~~pG~qng~~~sG~~~~~~w~~~~--~~~~~~~~w~~iA~ry~~~~y~~~V~~~el~NEP~~~~~~~~~~~~~~~ 207 (399)
T 3n9k_A 130 WIDLHGAPGSQNGFDNSGLRDSYNFQNGD--NTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFL 207 (399)
T ss_dssp EEEEEECTTCSSCCGGGSSTTCCCTTSTT--HHHHHHHHHHHHHHHHSSGGGTTTEEEEESCSCCCGGGSCHHHHHHHHH
T ss_pred EEEecCCCcccccccCCCCCCCCCCCCHH--HHHHHHHHHHHHHHHhhcccCCCceEEEEeccCCCCCCCCHHHHHHHHH
Confidence 99999876432 11211122344333 5789999999999999998 999999999999986445789999999
Q ss_pred HHHHHHHhcCCCcEEEEeCCCCC-CcchhhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHH
Q 008330 232 LGAEAVHAANPEVLVILSGLNFD-KDLSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGF 310 (570)
Q Consensus 232 ~~~~aIr~~dp~~lIiVeG~~w~-~dl~~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~ 310 (570)
+++++||+++|+++|+|++...+ .........+ ..++|+||++|+|.++.... ......+....+-.....
T Consensus 208 ~a~~~IR~~~p~~~Iii~dg~~~~~~W~~~l~~~---~~~~nvv~d~H~Y~~f~~~~-----~~~~~~~~i~~~c~~~~~ 279 (399)
T 3n9k_A 208 DGYNSLRQTGSVTPVIIHDAAQVFGYWNNFLTVA---EGQWNVVVDHHHYQVFSGGE-----LSRNINDHISVACNWGWD 279 (399)
T ss_dssp HHHHHHHHTTCCCCEEEECTTCCTTTTTTSSCGG---GTCCSEEEEEECCSCSSHHH-----HTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeEEEeCCCCChHHHHhhcccc---cCCCCEEEEeccccCCCccc-----ccCCHHHHHHHHHHHHHH
Confidence 99999999999999999632111 1111111111 12489999999998654210 000111122221111112
Q ss_pred HHhcCCCeEEeccccCCCC------------------------CC-----------c----chHHHHHHHHHHHHHCCCc
Q 008330 311 LLEQGWPLFVSEFGADLRG------------------------NN-----------V----NDNRYLNCFFGVAAELDWD 351 (570)
Q Consensus 311 l~~~g~Pv~iGEFG~~~~~------------------------~~-----------~----~~~~~~~~~~~~~~~~gig 351 (570)
+.+.+.|+|||||.+..++ ++ . .-.+|.++.++.+++ +-|
T Consensus 280 ~~~~~~~~ivGEwS~a~~dc~~~lng~~~g~r~~gt~~~~~~~g~c~~~~~~~~~~~~~k~~~~~f~~aQ~~~~e~-~~G 358 (399)
T 3n9k_A 280 AKKESHWNVAGSWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRYIEAQLDAFEY-TGG 358 (399)
T ss_dssp HHTCSSEEEEEECCSCSSSCSTTTTCTTCCCTTBTCSTTCCBCCCSGGGSSGGGCCHHHHHHHHHHHHHHHHHHHT-TTE
T ss_pred HhcCCCCEEEEecccccccchhhccCCCccccccccCCCCCcCCcCcCcCccccccHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 2346689999999986542 00 0 014777888888876 559
Q ss_pred eEEeccC
Q 008330 352 WALWTLV 358 (570)
Q Consensus 352 w~~W~~~ 358 (570)
|+||+||
T Consensus 359 w~fWtwK 365 (399)
T 3n9k_A 359 WVFWSWK 365 (399)
T ss_dssp EEESCSC
T ss_pred EEEeeee
Confidence 9999998
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.98 E-value=4.8e-32 Score=290.41 Aligned_cols=244 Identities=16% Similarity=0.212 Sum_probs=164.5
Q ss_pred HHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEE
Q 008330 79 DMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~V 158 (570)
+++++.|+++|||+||||+.++.+.+. ..+|...+ +.+++|+++|++|.++||+|
T Consensus 76 e~d~~~i~~~G~N~VRipi~~~~~~~~------------------------~~~py~~~-~~l~~ld~vv~~a~~~Gi~V 130 (408)
T 1h4p_A 76 EQDFANIASQGFNLVRIPIGYWAFQIL------------------------DDDPYVSG-LQESYLDQAIGWARNNSLKV 130 (408)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGTCCC------------------------TTCCCCCS-SHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHCCCCEEEccCCHHHcccC------------------------CCCCCccc-cHHHHHHHHHHHHHHCCCEE
Confidence 678999999999999999998766431 11232222 48999999999999999999
Q ss_pred EEecCCCCCCc---cccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC---CcEEEEeccCCCCCCCCChhHHH-HHHH
Q 008330 159 ILDNHISKPGW---CCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGV---RNVVGMSLRNELRGPKQNVKDWY-RYMQ 231 (570)
Q Consensus 159 ILD~H~~~~~w---~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~---p~Vig~dL~NEP~~~~~~~~~W~-~~~~ 231 (570)
|||+|..++.. ..+...+...|.+. ...++++++|++||+||+++ |+|++|||+|||+....+.+.|. .+++
T Consensus 131 ilDlH~~pG~qng~~~sG~~~~~~w~~~-~~~~~~~~~w~~ia~ry~~~~y~~~Vi~~el~NEP~~~~~~~~~~~~~~~~ 209 (408)
T 1h4p_A 131 WVDLHGAAGSQNGFDNSGLRDSYKFLED-SNLAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLA 209 (408)
T ss_dssp EEEEEECTTCSSCCGGGSSTTCCCTTSH-HHHHHHHHHHHHHHHHTTSHHHHTTEEEEESCSCCCGGGSCHHHHHHHTHH
T ss_pred EEECCCCCCccCCccCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHcccCCCCeEEEEEeccCCCCCCCCHHHHHHHHHH
Confidence 99999875421 11111122334332 24688999999999999998 99999999999997544678898 9999
Q ss_pred HHHHHHHhc-CCCcEEEE-eCCCCCCcch-hhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHH
Q 008330 232 LGAEAVHAA-NPEVLVIL-SGLNFDKDLS-FVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLS 308 (570)
Q Consensus 232 ~~~~aIr~~-dp~~lIiV-eG~~w~~dl~-~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 308 (570)
+++++||++ +|+++|+| +|..+..... ++. +. +..+|+||++|.|.++..+. .. ....+..+.+....
T Consensus 210 ~~~~~IR~~~~~~~~iii~dg~~~~~~w~~~l~--~~--~~~~nvv~s~H~Y~~~~~~~-~~----~~~~~~i~~~~~~~ 280 (408)
T 1h4p_A 210 PAYEYLRNNIKSDQVIIIHDAFQPYNYWDDFMT--EN--DGYWGVTIDHHHYQVFASDQ-LE----RSIDEHIKVACEWG 280 (408)
T ss_dssp HHHHHHHHTTCCCCCEEEECTTCCTTGGGGSSC--GG--GTCCSEEEEEEECSCSSHHH-HT----CCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCceEeeecccCchhhhhhcc--cc--CCCCCEEEEeeeccCCCCcc-cc----CCHHHHHHHHHHHH
Confidence 999999999 88765555 5542222211 111 11 12479999999999643210 00 00111111111111
Q ss_pred HHHHhcCCCeEEeccccCCCCC----------------------------------Cc---------chHHHHHHHHHHH
Q 008330 309 GFLLEQGWPLFVSEFGADLRGN----------------------------------NV---------NDNRYLNCFFGVA 345 (570)
Q Consensus 309 g~l~~~g~Pv~iGEFG~~~~~~----------------------------------~~---------~~~~~~~~~~~~~ 345 (570)
..+.+.+.|+||||||....+- +. ...+|.+..++.+
T Consensus 281 ~~~~~~~~pvivGE~g~~~~dc~~~lng~~~g~~~~g~~~~~~~~~~~~~~c~~~~~~~~~~~~~k~~~~~~~~aq~~~~ 360 (408)
T 1h4p_A 281 TGVLNESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYWSDERKENTRRYVEAQLDAF 360 (408)
T ss_dssp HHHTTCSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCCBTTBCCCBCSCCTTTTCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcCCCeEEEeccccccchHhhhcccccccccCCccccCccCCCccCcccCCCChhhccHHHHHHHHHHHHHHHHHH
Confidence 1123478899999999975420 00 1247788888888
Q ss_pred HHCCCceEEeccC
Q 008330 346 AELDWDWALWTLV 358 (570)
Q Consensus 346 ~~~gigw~~W~~~ 358 (570)
++.. ||+||+|+
T Consensus 361 ~~~~-Gw~fWt~K 372 (408)
T 1h4p_A 361 EMRG-GWIIWCYK 372 (408)
T ss_dssp TTTT-EEEESCSC
T ss_pred hhcC-CeEEEeEe
Confidence 6544 99999998
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=270.63 Aligned_cols=307 Identities=13% Similarity=0.131 Sum_probs=194.3
Q ss_pred CCCCeEecCCeEEcCCCCEEEEEEee--CCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchh
Q 008330 35 IGLPLSTNSRWIVDENGHRVKLACVN--WVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTV 112 (570)
Q Consensus 35 ~~~~L~t~G~~IVd~~G~~v~L~GVN--w~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv 112 (570)
|+++|+++|++|++ +|++|+|+|+| |.+... ....++++++.||++|||+||+++..+..... ....+
T Consensus 1 ~~~~v~~~g~~~~~-nG~~~~~~G~n~~~~~~~~-------~~~~~~~~l~~~k~~G~N~vR~~~~~~~~~~P--~~~~~ 70 (344)
T 1qnr_A 1 ASSFVTISGTQFNI-DGKVGYFAGTNCYWCSFLT-------NHADVDSTFSHISSSGLKVVRVWGFNDVNTQP--SPGQI 70 (344)
T ss_dssp CCCCCEEETTEEEE-TTEESCEEEEECGGGGGCC-------CHHHHHHHHHHHHHTTCCEEECCCCCEESSCC--STTCC
T ss_pred CCCcEEEECCEEEE-CCEEEEEEEEecccccccC-------CHHHHHHHHHHHHHcCCCEEEEccccCCCCCC--CCCce
Confidence 46799999999998 99999999999 654321 23457889999999999999997643211000 00000
Q ss_pred hhhhhhccchhhccCcccCCCCC-CCchHHHHHHHHHHHHhcCCCEEEEecCCCCC---------CccccCCCCCCCCCC
Q 008330 113 RQSFQKLGLLEAIGGIQSNNPSI-VDLPLIKAFQAVVASLGNNNVMVILDNHISKP---------GWCCSNSDGNGFFGD 182 (570)
Q Consensus 113 ~~s~~~lg~~~~~~g~~~~nP~~-~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~---------~w~~~~~dgng~~~d 182 (570)
.++ ..++ .++.+ .+++.++.+|++|++|.++||+||||+|..-+ .|+.+ ....||.+
T Consensus 71 --~~~------~~~~---~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~~~~w~~~g~~~~~~~~~g~--~~~~~~~~ 137 (344)
T 1qnr_A 71 --WFQ------KLSA---TGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGINAYVNAFGG--NATTWYTN 137 (344)
T ss_dssp --CSE------ECCT---TCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTTSHHHHHHHHHCS--CTTGGGGC
T ss_pred --eee------ecCC---CCcccccCHHHHHHHHHHHHHHHHCCCEEEEEeccCccccCCHHHHHHHhCC--ChhhhcCC
Confidence 000 0000 01111 12567899999999999999999999996311 01110 11245544
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhh
Q 008330 183 QYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRN 262 (570)
Q Consensus 183 ~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~ 262 (570)
+. ..+.+.++|+.|++|||++|+|++++|.|||.....+...|..++++++++||+++|+++|+++..+|+.+. ....
T Consensus 138 ~~-~~~~~~~~~~~~~~r~~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~ir~~dp~~~v~~g~~~~~~~~-~~~~ 215 (344)
T 1qnr_A 138 TA-AQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLST-GDGA 215 (344)
T ss_dssp HH-HHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCCTTCCTHHHHHHHHHHHHHHHHHCSSSEEECCCCCCCCTT-SCCC
T ss_pred HH-HHHHHHHHHHHHHHHhCCCCcEEEEEcccCcccCCCChHHHHHHHHHHHHHHHhcCCCCEEEECCccccCCC-CCcc
Confidence 32 357889999999999999999999999999987433567789999999999999999999999654442110 0000
Q ss_pred cc------cC----cCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCc
Q 008330 263 QA------VN----LTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNV 332 (570)
Q Consensus 263 ~p------~~----l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~ 332 (570)
.| ++ +....--++++|.|+.. |.... . . ....+..+.....+.+.||+|+|||...... .
T Consensus 216 ~~~~~~~g~d~~~~~~~~~~D~~s~h~Y~~~----~~~~~-~-~---~~~~~~~~~~~~~~~~kPv~l~E~G~~~~~~-~ 285 (344)
T 1qnr_A 216 YPYTYGEGTDFAKNVQIKSLDFGTFHLYPDS----WGTNY-T-W---GNGWIQTHAAACLAAGKPCVFEEYGAQQNPC-T 285 (344)
T ss_dssp GGGSSSSSCCHHHHHTCTTCCSEEEEECHHH----HTCCS-T-H---HHHHHHHHHHHHHHTTSCEEEEEECCSSCHH-H
T ss_pred CCccccccCcHHHHhCCCCCCeEEeeeCCCc----cCccc-h-H---HHHHHHHHHHHHHHcCCCEEEeecCCCCCCC-c
Confidence 01 00 01122348999999732 21111 0 0 1111222222223468999999999987531 1
Q ss_pred chHHHHHHHHHHHHHCCC-ceEEeccCceeecccCccCCCceeeeecCCC
Q 008330 333 NDNRYLNCFFGVAAELDW-DWALWTLVGSYYLREGVIGLNEYYGLFDWNW 381 (570)
Q Consensus 333 ~~~~~~~~~~~~~~~~gi-gw~~W~~~G~y~~r~~~~~~~et~Gll~~dw 381 (570)
....|++.++ ++.++ |+++|.|...| +++.....+.|||+..+.
T Consensus 286 ~~~~~~~~~~---~~~~~~g~~~W~~~d~~--~~g~~~~~~~~~i~~~~~ 330 (344)
T 1qnr_A 286 NEAPWQTTSL---TTRGMGGDMFWQWGDTF--ANGAQSNSDPYTVWYNSS 330 (344)
T ss_dssp HHHHHHHHHH---TSTTEEEEEESCEECBC--TTSCBCCCCTTCEETTSH
T ss_pred hHHHHHHHHH---hcCCCCceEEEeccCCC--CCCCccCCCCcEEEeCCc
Confidence 1234544432 23465 89999996432 344455678899998763
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.6e-29 Score=269.14 Aligned_cols=299 Identities=15% Similarity=0.159 Sum_probs=187.3
Q ss_pred CCCCCCeEecCCeEEcCCCCEEEEEEeeC-CCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccch
Q 008330 33 PAIGLPLSTNSRWIVDENGHRVKLACVNW-VSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLT 111 (570)
Q Consensus 33 ~~~~~~L~t~G~~IVd~~G~~v~L~GVNw-~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~t 111 (570)
....++++++|++|+. +|++|+|+|+|. ..+.....+.+.....++++++.||++|||+||+++..... . ++. .
T Consensus 19 ~~~~gfv~v~g~~f~~-nG~p~~~~G~N~~~~~~~~~~~~~~~~~~~~~dl~~~k~~G~N~vR~~~~d~~~-~--~~~-~ 93 (440)
T 1uuq_A 19 PAHEHFVRVNGGHFEL-QGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKS-E--INS-A 93 (440)
T ss_dssp ---CCCCEEETTEEEE-TTEEECEEEEECTTHHHHTCSSTTCCHHHHHHHHHHHHHTTCCEEEEECCCBCC-C--STT-S
T ss_pred CCCCCCEEeeCCEEEE-CCeEEEEEeEccCchhhhccCcccCCHHHHHHHHHHHHHcCCCEEEECcccCCC-C--Ccc-c
Confidence 3455789999999987 999999999993 22111111223334457899999999999999998321100 0 000 0
Q ss_pred hhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCC---------CccccCCC-------
Q 008330 112 VRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKP---------GWCCSNSD------- 175 (570)
Q Consensus 112 v~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~---------~w~~~~~d------- 175 (570)
+. .....+|..++++.|+.||++|++|.++||+|||++|..-. .|......
T Consensus 94 ~~-------------~~~~~~~g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~~~~~~~Gg~~~~~~w~~~~~~~~p~~~~ 160 (440)
T 1uuq_A 94 VK-------------PAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTN 160 (440)
T ss_dssp CS-------------SCSBSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHHHHHHHHTCCCCCHHHHC
T ss_pred cc-------------ccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEccccccccCCchhhHHHhccCCCCCCcccc
Confidence 00 00123555667889999999999999999999999995310 12211000
Q ss_pred C--------CCCCCCCCCCHHHHHHHHHHHHHH--------hCCCCcEEEEeccCCCCCCCC-----ChhHHHHHHHHHH
Q 008330 176 G--------NGFFGDQYFNPDLWIKGLTKMATI--------FNGVRNVVGMSLRNELRGPKQ-----NVKDWYRYMQLGA 234 (570)
Q Consensus 176 g--------ng~~~d~~~~~~~~~~~w~~iA~r--------yk~~p~Vig~dL~NEP~~~~~-----~~~~W~~~~~~~~ 234 (570)
+ ..+|.++ ...+.+.+.|+.|++| ||++|.|+++||.|||+.... +...+.+++++++
T Consensus 161 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~R~N~~tg~~ykn~P~Ii~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~ 239 (440)
T 1uuq_A 161 EWEAFMAKSASFYRSE-KAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAA 239 (440)
T ss_dssp CHHHHHHHHHGGGGCH-HHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTCCHHHHHHHHHHHHHHH
T ss_pred cccchhhhhhhhccCH-HHHHHHHHHHHHHHhccCCcCCcccCCCCceEEEeeccCcccccCcccccchHHHHHHHHHHH
Confidence 0 1233332 1256788999999999 999999999999999987531 3456778889999
Q ss_pred HHHHhcCCCcEEEEeCCCC-CCcc--h-hhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHH-------HHH
Q 008330 235 EAVHAANPEVLVILSGLNF-DKDL--S-FVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRV-------VDN 303 (570)
Q Consensus 235 ~aIr~~dp~~lIiVeG~~w-~~dl--~-~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~-------~~~ 303 (570)
++||++||++||++++.++ +.+. . +.... ....-.++++|.|..... |... ......+ .+.
T Consensus 240 ~~Ir~~Dp~~lV~~g~~g~~~~~~~~~~~~~~~----~~~~iD~~s~H~Y~~~w~--~~~~--~~~~~~~~~~~~~~~~~ 311 (440)
T 1uuq_A 240 AYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAH----ATPDIDYLTYHMWIRNWS--WFDK--TKPAETWPSAWEKAQNY 311 (440)
T ss_dssp HHHHHHCSSSEEECCCCSGGGTTTCHHHHHHHH----CSTTCCSEEEEECTTTTT--SSCT--TSHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCeEEECCccccCCCCcchhhHHhc----cCCCCCEEEEEeCCCccc--cCCC--ccccccHHHHHHHHHHH
Confidence 9999999999999976543 2111 1 11111 111223899999986431 1111 1111111 112
Q ss_pred HHHHHHHHHhcCCCeEEeccccCCCC-------CCcchHHHHHHHHHHHHH----CC--CceEEeccC
Q 008330 304 VMRLSGFLLEQGWPLFVSEFGADLRG-------NNVNDNRYLNCFFGVAAE----LD--WDWALWTLV 358 (570)
Q Consensus 304 ~~~~~g~l~~~g~Pv~iGEFG~~~~~-------~~~~~~~~~~~~~~~~~~----~g--igw~~W~~~ 358 (570)
+..+.....+.+.||+|+|||..+.. .......|++.+++.+.+ .+ .|+++|+|.
T Consensus 312 ~~~~~~~a~~~~kPvil~EfG~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~ 379 (440)
T 1uuq_A 312 MRAHIDVAKQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWN 379 (440)
T ss_dssp HHHHHHHHHHHTCCEEEEEECCCCGGGCCCTTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEE
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCCCCccCcCCChHHHHHHHHHHHHHHHHHHHhCCCceeEEEeeec
Confidence 22222222346899999999998742 123356777766554433 22 689999986
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=5e-28 Score=255.38 Aligned_cols=305 Identities=13% Similarity=0.182 Sum_probs=191.2
Q ss_pred CCCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEeccccc-ccccCccccchhhh
Q 008330 36 GLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLY-LATNDSLASLTVRQ 114 (570)
Q Consensus 36 ~~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~-~~~~~~~~n~tv~~ 114 (570)
.++|+++|++|+. +|++++|+|+|...... ..........++++++.||++|||+||+++..+ .+..
T Consensus 4 ~g~v~v~g~~~~~-nG~p~~~~G~n~~~~~~-~~~~~~~~~~~~~dl~~~k~~G~N~vR~~~~~~~~w~~---------- 71 (373)
T 1rh9_A 4 NNFVYTDGTHFAL-NGKSLYINGFNAYWLMY-IAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRP---------- 71 (373)
T ss_dssp CCCCEEETTEEEE-TTEEECEEEEECTTHHH-HHHSTTTTHHHHHHHHHHHHTTCCEEEEESSCSSSSSC----------
T ss_pred CCcEEEeCCEEEE-CCEEEEEEEEccccccc-cccCCccHHHHHHHHHHHHHCCCCEEEECeecCCCCcc----------
Confidence 4789999999998 99999999999422110 000112334578999999999999999975311 0000
Q ss_pred hhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCC---C------Ccccc-C---CCCCCCCC
Q 008330 115 SFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISK---P------GWCCS-N---SDGNGFFG 181 (570)
Q Consensus 115 s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~---~------~w~~~-~---~dgng~~~ 181 (570)
...+|..++++.++.||++|++|.++||+|||++|..- + .|... . .....+|.
T Consensus 72 --------------~~~~~g~~~~~~~~~ld~~i~~a~~~Gi~vil~l~~~~~~~gg~~~~~~w~~~~g~~~~~~~~~~~ 137 (373)
T 1rh9_A 72 --------------LQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFT 137 (373)
T ss_dssp --------------SEEETTEECHHHHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHHTTCCCCCGGGGGT
T ss_pred --------------ccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecccccccCChHHHHHHHhhcCCCCCchhhccc
Confidence 01123334667899999999999999999999999631 0 11100 0 00123444
Q ss_pred CCCCCHHHHHHHHHHHHHH--------hCCCCcEEEEeccCCCCCCCC-ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCC
Q 008330 182 DQYFNPDLWIKGLTKMATI--------FNGVRNVVGMSLRNELRGPKQ-NVKDWYRYMQLGAEAVHAANPEVLVILSGLN 252 (570)
Q Consensus 182 d~~~~~~~~~~~w~~iA~r--------yk~~p~Vig~dL~NEP~~~~~-~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~ 252 (570)
++ ...+.+.++|+.|++| ||++|.|+++||.|||..... +...+..++++++++||+++|+++|+++..+
T Consensus 138 ~~-~~~~~~~~~~~~l~~r~n~~tg~~y~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~dp~~~v~~g~~g 216 (373)
T 1rh9_A 138 NP-MVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEG 216 (373)
T ss_dssp CH-HHHHHHHHHHHHHHHCBCTTTCSBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHHCCSSEEECCCCC
T ss_pred CH-HHHHHHHHHHHHHHhccCccCCccccCCCcEEEEeeccCcCccCCCCHHHHHHHHHHHHHHHHhhCCCceEEeCccc
Confidence 33 2357788999999999 999999999999999987532 3367888899999999999999999997654
Q ss_pred CCCc-------------chhhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcc-hhhHHHHHHHHHHHHHHhcCCCe
Q 008330 253 FDKD-------------LSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQ-VCGRVVDNVMRLSGFLLEQGWPL 318 (570)
Q Consensus 253 w~~d-------------l~~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~-~~~~~~~~~~~~~g~l~~~g~Pv 318 (570)
+-.. ..++... ..+.-.++++|.|+.. |....... ........+........+.+.|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~D~~s~H~Y~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~kP~ 288 (373)
T 1rh9_A 217 FYGNDMRQYNPNSYIFGTNFISNN----QVQGIDFTTIHMYPNQ----WLPGLTQEAQDKWASQWIQVHIDDSKMLKKPL 288 (373)
T ss_dssp CCCGGGGGGSGGGCCCSCCHHHHH----TSTTCCCEEEECCHHH----HSTTSCHHHHHHHHHHHHHHHHHHHHHHTSCE
T ss_pred ccCCCCCcCCccccccccchhhhc----cCCCcCeEEEeeCCcc----cCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 3111 0111100 1112238999999732 21110000 00011111222222223368999
Q ss_pred EEeccccCCCCC---CcchHHHHHHHHHHHH----HC--CCceEEeccCceeecccCccCCCceeeeecCC
Q 008330 319 FVSEFGADLRGN---NVNDNRYLNCFFGVAA----EL--DWDWALWTLVGSYYLREGVIGLNEYYGLFDWN 380 (570)
Q Consensus 319 ~iGEFG~~~~~~---~~~~~~~~~~~~~~~~----~~--gigw~~W~~~G~y~~r~~~~~~~et~Gll~~d 380 (570)
+|+|||...... ......|++.+++.+. +. .+|+++|+|... +....++.|||+..+
T Consensus 289 ~i~E~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~-----~~~~~~d~f~i~~~~ 354 (373)
T 1rh9_A 289 LIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQ-----GMSSFDDGYQVVLQE 354 (373)
T ss_dssp EEEECCCCTTSTTCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCBCCT-----TCGGGCCSCCBCGGG
T ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeEeeeecCCC-----CCCCCCCCcEEEcCC
Confidence 999999987531 1224566665554433 22 268999998632 222234568998765
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=4e-28 Score=253.53 Aligned_cols=279 Identities=17% Similarity=0.202 Sum_probs=178.6
Q ss_pred CCCeEecCCeEEcCCCCEEEEEEeeCCCCCC-ccccCCCC---CChHHHHHHHHHHcCCcEEEecccccccccCccccch
Q 008330 36 GLPLSTNSRWIVDENGHRVKLACVNWVSHLE-PVVAEGLS---KQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLT 111 (570)
Q Consensus 36 ~~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~-~~v~~Gl~---~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~t 111 (570)
+.+|+|+|++|+. +|++|+|+|||+..+.. +....|.+ ...++++++.||++|||+||+++.++......+.
T Consensus 2 ~~~v~v~g~~~~~-nG~~~~~~GvN~~w~~~~~~~~~~~~~~~~~~~~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~--- 77 (353)
T 2c0h_A 2 AVRLSVSGTNLNY-NGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFD--- 77 (353)
T ss_dssp CCCEEEETTEEEE-TTEEECEEEEECCCSSTTCSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEEC---
T ss_pred CceEEEeCCEEEE-CCeEEEEEEEEHHhhhccccccCCccccchHHHHHHHHHHHHcCCCEEEEceecCCccCcccc---
Confidence 4689999999984 89999999999743321 12223444 2346789999999999999999876422110000
Q ss_pred hhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCC----CCCCCCCCCH
Q 008330 112 VRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGN----GFFGDQYFNP 187 (570)
Q Consensus 112 v~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgn----g~~~d~~~~~ 187 (570)
..|.. .-.+...++.+|++|++|.++||+|||++|. +|... .+. .++.+...-.
T Consensus 78 -------------~~g~~----~~~~~~~~~~ld~~~~~a~~~Gi~vil~l~~---~~~~~--~g~~~~~~~~~~~~~~~ 135 (353)
T 2c0h_A 78 -------------NNGYV----TGIDNTLISDMRAYLHAAQRHNILIFFTLWN---GAVKQ--STHYRLNGLMVDTRKLQ 135 (353)
T ss_dssp -------------TTSCE----EECCTTHHHHHHHHHHHHHHTTCEEEEEEEE---CSCCC--TTHHHHHHHHHCHHHHH
T ss_pred -------------CCCcc----ccCCHHHHHHHHHHHHHHHHcCCEEEEEccC---ccccC--CCcccccceEeCHHHHH
Confidence 00100 0012368999999999999999999999974 22110 110 0111110001
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCC---------------------------CChhHHHHHHHHHHHHHHhc
Q 008330 188 DLWIKGLTKMATIFNGVRNVVGMSLRNELRGPK---------------------------QNVKDWYRYMQLGAEAVHAA 240 (570)
Q Consensus 188 ~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~---------------------------~~~~~W~~~~~~~~~aIr~~ 240 (570)
+.+.+.|++||+|||++|.|+++||+|||.... .....+.+++++++++||++
T Consensus 136 ~~~~~~~~~~a~ry~~~p~i~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~Ir~~ 215 (353)
T 2c0h_A 136 SYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEV 215 (353)
T ss_dssp HHHHHTHHHHHHHHTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEeccCCCCCccccccCCCccccccccccccccccccccCcHHHHHHHHHHHHHHHHhh
Confidence 122466799999999999999999999998641 01256788889999999999
Q ss_pred CCCcEEEEeCCC-C-CCcchhhhhccc--------CcCCCCCE-EEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHH
Q 008330 241 NPEVLVILSGLN-F-DKDLSFVRNQAV--------NLTFTGKL-VFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSG 309 (570)
Q Consensus 241 dp~~lIiVeG~~-w-~~dl~~~~~~p~--------~l~~~~nl-Vys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g 309 (570)
+|+++|++++.. | ..+.......+. .. ..+++ +|++|+|++.. .|....... .. +. .
T Consensus 216 dp~~~V~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~-~~~~~D~~s~H~Y~~~~--~~~~~~~~~--~~----~~---~ 283 (353)
T 2c0h_A 216 DPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGGK-QSGTLSFYQVHTYDWQN--HFGNESPFK--HS----FS---N 283 (353)
T ss_dssp CTTCCEEEEESCGGGBCSSTTCCBTTSHHHHHHHHCC-TTCCCSSEEEECCCBTT--BCCTTCTTS--SC----GG---G
T ss_pred CCCCeEEECCccccCCCcccCcCCCCcchhhhhhccc-cCCCCCEEEEeeCCCcc--cccccCccc--ch----HH---H
Confidence 999999998532 2 222111011110 01 13567 99999998542 221100000 00 00 0
Q ss_pred HHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCC-CceEEeccCc
Q 008330 310 FLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELD-WDWALWTLVG 359 (570)
Q Consensus 310 ~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~g-igw~~W~~~G 359 (570)
.+.+.|++|+|||.....+ .++..+++++.+.+ +|+++|+|..
T Consensus 284 --~~~~~P~~i~E~G~~~~~~-----~~~~~~~~~~~~~g~~g~~~W~~~d 327 (353)
T 2c0h_A 284 --FRLKKPMVIGEFNQEHGAG-----MSSESMFEWAYTKGYSGAWTWSRTD 327 (353)
T ss_dssp --GCCSSCEEEEECCGGGSTT-----CCHHHHHHHHHHTTCSEEEESCSSS
T ss_pred --hcCCCCEEEEecCCCCCCC-----ccHHHHHHHHHHCCCcEEEEEEEcC
Confidence 1257999999999986321 35567888999999 8999999973
|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.5e-27 Score=241.69 Aligned_cols=340 Identities=10% Similarity=-0.007 Sum_probs=199.9
Q ss_pred CCCCCeEecCCeEEcCCCCEEEEEEee--CCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccch
Q 008330 34 AIGLPLSTNSRWIVDENGHRVKLACVN--WVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLT 111 (570)
Q Consensus 34 ~~~~~L~t~G~~IVd~~G~~v~L~GVN--w~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~t 111 (570)
+|.++++|+|++|+- +|++|+++|+| |.+. .....++++++.|+++|+|+||+....+..... ...
T Consensus 2 vp~GFv~~~g~~f~~-nG~~~~~~G~N~~~~~~--------~~~~~~~~~l~~~~~~G~N~iR~w~~~~g~~~~---~~~ 69 (387)
T 4awe_A 2 VPKGFVTTEGDHFKL-DGKDFYFAGSNAYYFPF--------NDQPDIEKGMTAARAAGLTVFRTWGFNDKNRTY---IPT 69 (387)
T ss_dssp ---CCCEEETTEEEE-TTEECCEEEEECTTGGG--------SCHHHHHHHHHHHHHTTCCEEEEECCCEEESSC---CTT
T ss_pred CCCcCEEEECCEEEE-CCEEEEEEEEccCcCCC--------CCHHHHHHHHHHHHhCCCCEEEeCcccCCCccC---ccc
Confidence 467899999999874 79999999999 4322 123457899999999999999995533221110 000
Q ss_pred hhhhhhhccchh-hccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCcccc--------CCCCCCCCCC
Q 008330 112 VRQSFQKLGLLE-AIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCS--------NSDGNGFFGD 182 (570)
Q Consensus 112 v~~s~~~lg~~~-~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~--------~~dgng~~~d 182 (570)
.....+..+... ........++...+...++.+|.+|++|.++||+||+++|.....++.. ....+.||.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~v~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 149 (387)
T 4awe_A 70 GLPQYGNEGAGDPTNTVFQWFEADGTQTIDVSPFDKVVDSATKTGIKLIVALTNNWADYGGMDVYTVNLGGKYHDDFYTV 149 (387)
T ss_dssp CSSCCCCCTTCCTTCCCSEEECTTSCEEECCGGGHHHHHHHHHHTCEEEEECCBSSSTTCCHHHHHHHTTCCSTTHHHHC
T ss_pred cchhhhccccccccchhhhhcccCccchhhhhhHHHHHHHHHHcCCEEEEeecccccccCCCcccccccccccccccccC
Confidence 000000000000 0001112233444556788899999999999999999999754322110 0000112222
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCC------------CChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 183 QYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPK------------QNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 183 ~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~------------~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
. ...+.+++.|+.|++|||++|.|+++||.|||+... ...+.|+.++++++++||+.||+++|++++
T Consensus 150 ~-~~~~~~~~~~~~~~~r~k~~p~I~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~Dp~~lv~~~~ 228 (387)
T 4awe_A 150 P-KIKEAFKRYVKAMVTRYRDSEAILAWELANEARCGADGTRNLPRSEKGCTTETVTGWIEEMSAYVKSLDGNHLVTWGG 228 (387)
T ss_dssp H-HHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCSCCCTTTSCCCCSSSCCHHHHHHHHHHHHHHHHHHCSSSEEECCC
T ss_pred H-HHHHHHHHHHHHHHhhcCCCcceeEeccCCCCCCCCCccccccccccccchHHHHHHHHHHHHHHHHhCCCCcEEEcc
Confidence 2 125678899999999999999999999999998652 135678889999999999999999999987
Q ss_pred CCCCCcchhhhhc----------ccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEE
Q 008330 251 LNFDKDLSFVRNQ----------AVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFV 320 (570)
Q Consensus 251 ~~w~~dl~~~~~~----------p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~i 320 (570)
.++.......... ........-.++++|.|+..... . .......+..+.......+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~y~~~~~~------~---~~~~~~~~~~~~~~~~~~~kp~~~ 299 (387)
T 4awe_A 229 EGGFNRGEDEEDGFYNGADGGDFDRELGLRNVDFGTMHLYPDWWSK------S---IEWSNQWIHDHAASGRAANKPVVL 299 (387)
T ss_dssp CCCCBCCC--CCTTTBTTTSCCHHHHHTCTTCCCEEEEECHHHHTC------C---HHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred cccccCCCccccccccccccccchhcccCCccceeeecccccccch------h---hhhhHHHHHHHHHHHHhcCCCeee
Confidence 6643321110000 00001123458899999643210 0 111112222222223347899999
Q ss_pred eccccCCCCCC---------cchHHHHHHHHHH-HHHCCCceEEeccCceeecccCccCCCceeeeecCCCCCcc-chhH
Q 008330 321 SEFGADLRGNN---------VNDNRYLNCFFGV-AAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIR-NSSF 389 (570)
Q Consensus 321 GEFG~~~~~~~---------~~~~~~~~~~~~~-~~~~gigw~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~~~-~~~~ 389 (570)
+|||....... .....++..+... ......|+++|+|++..+-.. ....+.||++..|..... -.++
T Consensus 300 ~E~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~--~~~~dg~~i~~~d~~~~~~i~~~ 377 (387)
T 4awe_A 300 EEYGWMTDKGRLDQLGQVKNETRLEVVGGWQKIAIQEKLAGDMYWQFGYGGYSYG--RNHDDSFTIYLEDDEAKELVYKH 377 (387)
T ss_dssp EEECCCCHHHHHHHHSCCCCSCHHHHHHHHHHHHHHHTCSEEEESCEECSCBTTB--SCCCCSCCEETTSTTHHHHTHHH
T ss_pred ccccccccCCCccchhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcCCCCCCC--CccCCCCEEECCCCCHHHHHHHH
Confidence 99998763211 1122333333333 334557899999986543222 233566899876533211 1235
Q ss_pred HHHHHhcc
Q 008330 390 LERISSLQ 397 (570)
Q Consensus 390 ~~~~~~l~ 397 (570)
.++|+.|.
T Consensus 378 a~~~~~l~ 385 (387)
T 4awe_A 378 AKKVQKLN 385 (387)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 56666553
|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-27 Score=243.66 Aligned_cols=283 Identities=18% Similarity=0.149 Sum_probs=174.3
Q ss_pred CeEecCCeEEcCCCCEEEEEEeeCCCCCC-ccccCCCCC---ChHHHHHHHHHHcCCcEEEecccccccccCccccchhh
Q 008330 38 PLSTNSRWIVDENGHRVKLACVNWVSHLE-PVVAEGLSK---QPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVR 113 (570)
Q Consensus 38 ~L~t~G~~IVd~~G~~v~L~GVNw~g~~~-~~v~~Gl~~---~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~ 113 (570)
.|+|+|++|+ .+|++|+|+|||+.+... ...+.+.+. ..++++++.||++|||+||+++..+......+..
T Consensus 1 rv~v~g~~f~-~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~---- 75 (351)
T 3vup_A 1 RLHIQNGHFV-LNGQRVFLSGGNLPWMSYAYDFGDGQWQRNKNRIEPEFKKLHDAGGNSMRLWIHIQGETTPAFND---- 75 (351)
T ss_dssp CCEEETTEEE-ETTEEBCEEEEECCCSSTTCSSSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECT----
T ss_pred CEEEECCEEE-ECCEEEEEEEEecCccccccccCcccCcCCHHHHHHHHHHHHHcCCcEEEECcccccccCccccc----
Confidence 3799999998 599999999999764421 111222221 2367889999999999999998765332210000
Q ss_pred hhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHH
Q 008330 114 QSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKG 193 (570)
Q Consensus 114 ~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~ 193 (570)
.....+...+.+.++.+|++|++|.++|||||||+|..... .++......++.+.....+.+.+.
T Consensus 76 --------------~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 140 (351)
T 3vup_A 76 --------------QGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCLWNAAVN-QDSHNRLDGLIKDQHKLQSYIDKA 140 (351)
T ss_dssp --------------TSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEEEECSSC-CCGGGHHHHHHHCHHHHHHHHHHT
T ss_pred --------------ccccccccccHHHHHHHHHHHHHHHHCCCeEEEEecccccc-cCCCCccccccCCcHHHHHHHHHH
Confidence 00011122356789999999999999999999999975421 111000001111111113445678
Q ss_pred HHHHHHHhCCCCcEEEEeccCCCCCCC---------------------------CChhHHHHHHHHHHHHHHhcCCCcEE
Q 008330 194 LTKMATIFNGVRNVVGMSLRNELRGPK---------------------------QNVKDWYRYMQLGAEAVHAANPEVLV 246 (570)
Q Consensus 194 w~~iA~ryk~~p~Vig~dL~NEP~~~~---------------------------~~~~~W~~~~~~~~~aIr~~dp~~lI 246 (570)
|++|++|||++|.|++++|.|||+... .....+.+++++++++||+.||+++|
T Consensus 141 ~~~~v~r~kn~psi~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~dp~~lv 220 (351)
T 3vup_A 141 LKPIVNHVKGHVALGGWDLMNEPEGMMIPDKHNAEKCYDTTALKNSGAGWAGNKYLYQDILRFLNWQADAIKTTDPGALV 220 (351)
T ss_dssp HHHHHHHTTTCTTBCCEEEEECGGGGBCCSCCCSSGGGCCGGGTTSSTTTTCSCBCHHHHHHHHHHHHHHHHHHSTTCCE
T ss_pred HHHHHHHhcCCCceEEEEecccccccccccccccccccccchhhcccccccccccchhhHHHHHHHHHHHhhccCCCCee
Confidence 999999999999999999999996531 12356778889999999999999999
Q ss_pred EEeCCCCC--Ccchh----hhhc---c-cCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCC
Q 008330 247 ILSGLNFD--KDLSF----VRNQ---A-VNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGW 316 (570)
Q Consensus 247 iVeG~~w~--~dl~~----~~~~---p-~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~ 316 (570)
.++..++. .+... .... . .........++++|.|+.... |..... .. .. . .....+.
T Consensus 221 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~s~h~Y~~~~~--~~~~~~--~~-------~~-~-~~~~~~k 287 (351)
T 3vup_A 221 TMGVWNPKSNTDHFNMNNHYSDHCLRLAGGKQKGVFDFYQFHSYSWQGK--WDEVAP--FT-------HQ-A-SDYGLHK 287 (351)
T ss_dssp EEEESSGGGSCSSTTCCCTTSHHHHHHHHCCTTCSCSSEEEECCCBTTB--CCTTCG--GG-------SC-G-GGGCCSS
T ss_pred EecCcccccccCccccccccccccccccccccccccceeeeeccCcccc--cchhhh--HH-------HH-H-HhcCCCC
Confidence 99754321 11100 0000 0 011123456899999975431 111100 00 00 0 0012578
Q ss_pred CeEEeccccCCCCCCcchHHHHHHHHHHHHHCC-CceEEeccC
Q 008330 317 PLFVSEFGADLRGNNVNDNRYLNCFFGVAAELD-WDWALWTLV 358 (570)
Q Consensus 317 Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~g-igw~~W~~~ 358 (570)
||+|||||........ ...+.+.+.+.+ .|.++|+|+
T Consensus 288 Pvii~Efg~~~~~~~~-----~~~~~~~~~~~~~~G~~~W~~~ 325 (351)
T 3vup_A 288 PIVVGEFWEQDGGGMT-----ITQMFNYVYNHGYAGAWSWHLV 325 (351)
T ss_dssp CEEEEECCGGGSTTCC-----HHHHHHHHHHTTCSEEEEECHH
T ss_pred cEEEEeCCCCCCCCcC-----HHHHHHHHHhcCCeEEEEEeee
Confidence 9999999987654321 223334445555 478899986
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6e-26 Score=240.25 Aligned_cols=288 Identities=14% Similarity=0.171 Sum_probs=174.0
Q ss_pred ecCCeEEcCCCCEEEEEEee--CCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhh
Q 008330 41 TNSRWIVDENGHRVKLACVN--WVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQK 118 (570)
Q Consensus 41 t~G~~IVd~~G~~v~L~GVN--w~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~ 118 (570)
++|.+|+ .+|+|+++.|+| |..+. ....++++++.|+++|+|+||+....+... + +.+....+
T Consensus 15 ~~g~~F~-ldGkp~~f~G~N~y~~~~~--------~~~~i~~~l~~~a~~G~N~VRv~~f~d~~~---~-~~~~~~~l-- 79 (383)
T 3pzg_A 15 VPRGSHM-LNGKEFRFIGSNNYYMHYK--------SNRMIDSVLESARDMGIKVLRIWGFLDGES---Y-CRDKNTYM-- 79 (383)
T ss_dssp -------------CCEEEEECSCTTTS--------CHHHHHHHHHHHHHHTCCEEEEECCCBSHH---H-HHHHTEES--
T ss_pred ccCCEEE-ECCEEEEEEEEEecccccC--------CHHHHHHHHHHHHHcCCCEEEEeccccccc---c-cccccccc--
Confidence 4555654 599999999999 43321 224478899999999999999975432100 0 00000000
Q ss_pred ccchhhccCcccCCCC-CCCchHHHHHHHHHHHHhcCCCEEEEecCCCCC---------CccccCCCCCCCCCCCCCCHH
Q 008330 119 LGLLEAIGGIQSNNPS-IVDLPLIKAFQAVVASLGNNNVMVILDNHISKP---------GWCCSNSDGNGFFGDQYFNPD 188 (570)
Q Consensus 119 lg~~~~~~g~~~~nP~-~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~---------~w~~~~~dgng~~~d~~~~~~ 188 (570)
+..+|.+..+.. -.+++.|+.||++|++|.++||+|||++|..-+ .|. +......||.++. ..+
T Consensus 80 ----qp~~G~yd~~~~~~~~~~~~~~LD~~i~~A~k~GI~viL~l~~~w~~~GG~~~y~~~~-g~~~~~~f~~dp~-~~~ 153 (383)
T 3pzg_A 80 ----HPEPGVFGVPEGISNAQNGFERLDYTIAKAKELGIKLIIVLVNNWDDFGGMNQYVRWF-GGTHHDDFYRDER-IKE 153 (383)
T ss_dssp ----BSBTTBCSSCTTCSSCEEHHHHHHHHHHHHHHHTCEEEEECCBSSSTTSHHHHHHHHT-TCCSTTHHHHCHH-HHH
T ss_pred ----ccCCCcccccccccchHHHHHHHHHHHHHHHHCCCEEEEEccccccccCCccchhhhc-CCCccccccCCHH-HHH
Confidence 001122210000 013778999999999999999999999996311 010 0001122343331 257
Q ss_pred HHHHHHHHHHHH--------hCCCCcEEEEeccCCCCCCCC-ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCc---
Q 008330 189 LWIKGLTKMATI--------FNGVRNVVGMSLRNELRGPKQ-NVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKD--- 256 (570)
Q Consensus 189 ~~~~~w~~iA~r--------yk~~p~Vig~dL~NEP~~~~~-~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~d--- 256 (570)
.+.++|+.|++| |+++|.|+++||.|||..... +.+.+..++++++++||++||+++|++++.++...
T Consensus 154 ~~~~~~~~l~~r~N~~tG~~y~~~p~I~~w~l~NEp~~~~~~~~~~~~~w~~~~~~~IR~~Dp~~lVt~G~~g~~~~~~~ 233 (383)
T 3pzg_A 154 EYKKYVSFLINHVNVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWVKEMSSYIKSLDPNHLVAVGDEGFFSNYEG 233 (383)
T ss_dssp HHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBTCCCTTCTTSHHHHHHHHHHHHHHHHHCSSSEEECCCCCCCBCCTT
T ss_pred HHHHHHHHHHhhhccccCcccCCCCcEEEEEecCCCCcccCccHHHHHHHHHHHHHHHHhhCCCceEEEccccccccccc
Confidence 889999999999 999999999999999987532 23567778889999999999999999986544210
Q ss_pred -----------------chhhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeE
Q 008330 257 -----------------LSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLF 319 (570)
Q Consensus 257 -----------------l~~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~ 319 (570)
..+..... .+.--++++|.|+.. |... .....+-..+.+..+.....+.+.||+
T Consensus 234 ~~~~~~~~~~~~~~~~g~df~~~~~----~~~iD~~t~H~Yp~~----w~~~-~~~~~~~~~~wi~~h~~~a~~~gKPvv 304 (383)
T 3pzg_A 234 FKPYGGEAEWAYNGWSGVDWKKLLS----IETVDFGTFHLYPSH----WGVS-PENYAQWGAKWIEDHIKIAKEIGKPVV 304 (383)
T ss_dssp CCCGGGTTGGGTBTTTSCCHHHHHT----CTTCCSEEEEECHHH----HTCC-GGGHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred ccccCCCCccccccccCCChHhhcC----CCCCCEEEEEecccc----cCcC-hHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 01111111 112237899999843 3211 111111122334444444445899999
Q ss_pred EeccccCCCCCCcchHHHHHHHHHHHHHC-CCceEEeccCc
Q 008330 320 VSEFGADLRGNNVNDNRYLNCFFGVAAEL-DWDWALWTLVG 359 (570)
Q Consensus 320 iGEFG~~~~~~~~~~~~~~~~~~~~~~~~-gigw~~W~~~G 359 (570)
|+|||....+. ..+..+++.+.+.+.+. +.|+.+|++.+
T Consensus 305 ~eEfG~~~~~~-~~r~~~~~~~~~~~~~~~~~g~~~Wq~~~ 344 (383)
T 3pzg_A 305 LEEYGIPKSAP-VNRTAIYRLWNDLVYDLGGDGAMFWMLAG 344 (383)
T ss_dssp EEEECCCTTSS-SCHHHHHHHHHHHHHHTTCCEEEESCBCC
T ss_pred EEecCCCCCCh-hHHHHHHHHHHHHHHHhCCcceEEEEecC
Confidence 99999986532 34567777777766554 57999999975
|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
Probab=99.85 E-value=9.3e-21 Score=204.58 Aligned_cols=359 Identities=14% Similarity=0.201 Sum_probs=225.6
Q ss_pred HHHHHHHHcCCcEEEe--cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 80 MLSKRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 80 ~~~~~i~~~GfN~VRl--Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
+....|.+.+||.|++ .+.|..+++. |...+ +..+|++|+.|.++||.
T Consensus 28 ~~~~~~~~~~fn~~t~en~~kw~~~ep~---------------------------~g~~~---f~~~D~~~~~a~~~gi~ 77 (436)
T 2d1z_A 28 SAYTTIASREFNMVTAENEMKIDATEPQ---------------------------RGQFN---FSAGDRVYNWAVQNGKQ 77 (436)
T ss_dssp HHHHHHHHHHCSEEEESSTTSHHHHCSB---------------------------TTBCC---CHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhCCeeeeccccccccccCC---------------------------CCccC---hHHHHHHHHHHHHCCCE
Confidence 3456677789999999 5777655431 11111 46799999999999999
Q ss_pred EEE---ecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCC---hhHH-----
Q 008330 158 VIL---DNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQN---VKDW----- 226 (570)
Q Consensus 158 VIL---D~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~---~~~W----- 226 (570)
|.. -.|...|.|.... +...-.+.+.++.+.|++|||+ .|..+|+.|||...... ...|
T Consensus 78 v~ghtlvW~~q~P~W~~~~--------~~~~~~~~~~~~i~~v~~ry~g--~v~~w~v~NE~~~~~~~g~~~~~~~~~~g 147 (436)
T 2d1z_A 78 VRGHTLAWHSQQPGWMQSL--------SGSTLRQAMIDHINGVMGHYKG--KIAQWDVVSHAFSDDGSGGRRDSNLQRTG 147 (436)
T ss_dssp EEEEEEECSTTCCHHHHTC--------CHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEESCBCSSSSCCBCCCTTGGGC
T ss_pred EEEEEEEeCCCCchhhhcC--------CHHHHHHHHHHHHHHHHHhcCC--ceEEEEeecccccCCCCccccCchhhhcc
Confidence 964 3466556664210 0001135667788899999997 57889999999643211 0112
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeCCCCCC-c----------chhhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcc
Q 008330 227 YRYMQLGAEAVHAANPEVLVILSGLNFDK-D----------LSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQ 295 (570)
Q Consensus 227 ~~~~~~~~~aIr~~dp~~lIiVeG~~w~~-d----------l~~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~ 295 (570)
..+++.+.+++|+++|+..+++.+.+-.. + +..+...-+ ++ +-+=+..|+.....
T Consensus 148 ~~~i~~af~~Ar~~dP~a~l~~Ndyn~~~~~~~k~~~~~~~v~~l~~~g~--~i-DgiG~q~H~~~~~~----------- 213 (436)
T 2d1z_A 148 NDWIEVAFRTARAADPAAKLCYNDYNIENWTWAKTQGVYNMVRDFKQRGV--PI-DCVGFQSHFNSGSP----------- 213 (436)
T ss_dssp TTHHHHHHHHHHHHCTTSEEEEEESSCCSTTSHHHHHHHHHHHHHHHHTC--CC-CEEEECCEEBTTBC-----------
T ss_pred hHHHHHHHHHHHhhCCCCEEEEeccccccCChhHHHHHHHHHHHHHhCCC--cc-cEEEEeeEEcCCCC-----------
Confidence 25778899999999999999996543211 0 111111111 12 23444556542110
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCC--CceEEeccCceeecccCccCCCce
Q 008330 296 VCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELD--WDWALWTLVGSYYLREGVIGLNEY 373 (570)
Q Consensus 296 ~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~g--igw~~W~~~G~y~~r~~~~~~~et 373 (570)
..+.+.+.+++ +.+.|+||+|+|+++... ...+++.++..+.++. .|-++|.+...+-.+. +..
T Consensus 214 ~~~~~~~~l~~----~a~~g~~v~iTEldv~~~-----qa~~y~~~~~~~~~~~~~~gvt~Wg~~d~~sW~~-----~~~ 279 (436)
T 2d1z_A 214 YNSNFRTTLQN----FAALGVDVAITELDIQGA-----SSSTYAAVTNDCLAVSRCLGITVWGVRDTDSWRS-----GDT 279 (436)
T ss_dssp CCTTHHHHHHH----HHTTTCEEEEEEEEETTC-----CHHHHHHHHHHHHTCTTEEEEEESCSBGGGCTTG-----GGC
T ss_pred CHHHHHHHHHH----HHHcCCeEEEeecchhHH-----HHHHHHHHHHHHHhcCCceEEEeccccCCccccc-----ccc
Confidence 11234455543 235799999999998822 3466777777777664 5778998764332222 223
Q ss_pred eeeecCCCCCccchhHHHHHHhcccccCCCCCCCcCccceeeCCCCceeeeecCC----CCceecCCCCCC--CCccccC
Q 008330 374 YGLFDWNWCDIRNSSFLERISSLQSPFRGPGVFETGLHKVIYHPATGLCVQRKSF----LDPLTLGPCTES--EAWSYTP 447 (570)
Q Consensus 374 ~Gll~~dw~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~tg~c~~~~~~----~~~~~~~~c~~~--~~W~~~~ 447 (570)
.+|++.++... +.+...+..+... +..+.+.....+....+|+|+++.+. ..++.+++|.++ |+|.++.
T Consensus 280 ~~L~d~~g~~k--pa~~~v~~~l~~~---~~~~~~~~~~~i~n~~sg~CLDv~~~~~~~g~~v~~~~C~g~~nQ~W~~~~ 354 (436)
T 2d1z_A 280 PLLFNGDGSKK--AAYTAVLNALNGG---SSTPPPSGGGQIKGVGSGRCLDVPNASTTDGTQVQLYDCHSATNQQWTYTD 354 (436)
T ss_dssp CSSBCTTSCBC--HHHHHHHHHHTTC------------CCEEETTTCCEEECGGGCCCTTEECEEECCCSCGGGCCEECT
T ss_pred ccccccCCCcc--hHHHHHHHHhhcc---ccCCCCCCceEEEECCCCceEeccCCcCCCCceEEEEecCCCCceEEEEec
Confidence 46777765422 2233223333321 11110112367778889999999542 356999999985 7999999
Q ss_pred CcceeecccceEEeecc--CCccceeccccC-CCCCceeEeeccccEEEEecCCCceEEEeecC----CC-ceeeccee
Q 008330 448 HKTISLKGAYFCLQAKH--VGKPAKLGIICT-DCGSTWEIISDSKMHLSSKADNGTTVCLDVDS----SN-TIVTNTCK 518 (570)
Q Consensus 448 ~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~-~~~~~W~~~s~~~~~~~~~~~~~~~~cld~~~----~~-~~~~~~c~ 518 (570)
.+.|+. .+++||++.+ .|.++.+ +.|. +.+|+|++.+++. |.. ..+++|||+.+ +| +|+.+.|.
T Consensus 355 ~g~i~~-~sg~CLdv~~~~~G~~v~~-~~C~g~~nQ~W~~~~~G~--i~~---~~sg~cLdv~~~s~~~g~~v~~~~c~ 426 (436)
T 2d1z_A 355 AGELRV-YGDKCLDAAGTGNGTKVQI-YSCWGGDNQKWRLNSDGS--IVG---VQSGLCLDAVGGGTANGTLIQLYSCS 426 (436)
T ss_dssp TSCEEE-TTTEEEEESSSSTTCBEEE-EECCCCGGGCEEECTTSC--EEE---TTTCCEEEEGGGCCSTTCBEEEECCC
T ss_pred CceEEE-CCCeEEEECCCCCCceEEE-EecCCCCCceEEECCCCe--EEE---CCCCCeEecCCCCCCCCCEEEEEeCC
Confidence 888874 6789999985 4777766 8999 6789999987765 332 35789999963 45 67778874
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-16 Score=175.29 Aligned_cols=274 Identities=11% Similarity=0.062 Sum_probs=161.3
Q ss_pred CCCCCeEecCCeEEcC-CCCEEEEEEeeCCCCCCccccC-CC------------CCChHHHHHHHHHHcCCcEEEecccc
Q 008330 34 AIGLPLSTNSRWIVDE-NGHRVKLACVNWVSHLEPVVAE-GL------------SKQPMDMLSKRVVDMGFNCVRLTWPL 99 (570)
Q Consensus 34 ~~~~~L~t~G~~IVd~-~G~~v~L~GVNw~g~~~~~v~~-Gl------------~~~~~~~~~~~i~~~GfN~VRlPi~~ 99 (570)
..-.+++++|++|+.. +|++|.|||||+.....+.-+. |- .....+++++.||++|+|+||+ +.+
T Consensus 31 ~~~r~I~VkG~~f~~~~NG~~f~lkGVny~p~~~~~~~~~G~~~~~~~~~d~l~~~e~~~rDi~LmK~~GiN~VRv-y~~ 109 (555)
T 2w61_A 31 EKTPAIKIVGNKFFDSESGEQFFIKGIAYQLQRSEEELSNANGAFETSYIDALADPKICLRDIPFLKMLGVNTLRV-YAI 109 (555)
T ss_dssp TTSCCEEEETTEEEETTTCCBCCEEEEECCCCCC------CTTTTCCSSCCGGGCHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred ccCceEEEECCEEEECCCCeEEEEEEEECCCcccccccccCCccccccccccCCCHHHHHHHHHHHHHcCCCEEEE-ecc
Confidence 3457899999999987 9999999999986511111111 11 1122577899999999999999 211
Q ss_pred cccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCC
Q 008330 100 YLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGF 179 (570)
Q Consensus 100 ~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~ 179 (570)
+|... .+++++.|.++|||||+++|..... ...
T Consensus 110 --------------------------------~P~~~-------~d~~ldl~~~~GIyVIle~~~p~~~-----i~~--- 142 (555)
T 2w61_A 110 --------------------------------DPTKS-------HDICMEALSAEGMYVLLDLSEPDIS-----INR--- 142 (555)
T ss_dssp --------------------------------CTTSC-------CHHHHHHHHHTTCEEEEESCBTTBS-----CCT---
T ss_pred --------------------------------CCCCC-------hHHHHHHHHhcCCEEEEeCCCCCcc-----ccc---
Confidence 11111 2678889999999999998863211 011
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCC---hhHHHHHHHHHHHHHHhcCCCc-EEEEeCCCCCC
Q 008330 180 FGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQN---VKDWYRYMQLGAEAVHAANPEV-LVILSGLNFDK 255 (570)
Q Consensus 180 ~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~---~~~W~~~~~~~~~aIr~~dp~~-lIiVeG~~w~~ 255 (570)
.+..+. +.+.+..+++++||+++|+|++|.+.||+...... ..-+...++++.+.|++.+++. +|-.+...-..
T Consensus 143 -~~P~~~-~~~~~r~~~~V~ry~nhP~Vi~W~vGNE~~~~~~~~~~~~y~~aa~r~~~~~lk~~d~R~IpVgy~~ad~~~ 220 (555)
T 2w61_A 143 -ENPSWD-VHIFERYKSVIDAMSSFPNLLGYFAGNQVTNDHTNTFASPFVKAAIRDAKEYISHSNHRKIPVGYSTNDDAM 220 (555)
T ss_dssp -TSCCCC-HHHHHHHHHHHHHHTTCTTEEEEEEEESSSCSTTCGGGHHHHHHHHHHHHHHHHHSSSCCCCEEEEECCCTT
T ss_pred -CCHHHH-HHHHHHHHHHHHHcCCCCcEEEEEeCccccCCCccchhhHHHHHHHHHHHHHHHhcCCCcceeeccccccch
Confidence 112232 56678889999999999999999999999764221 1234556677778888888764 34444421111
Q ss_pred cchhhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchH
Q 008330 256 DLSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDN 335 (570)
Q Consensus 256 dl~~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~ 335 (570)
....+.... .-....--+|++|.|++.....+ . ...+.+....+.+.++|||++|||+.+..+..- .
T Consensus 221 ~r~~la~yl-~c~~~~~D~~~~N~Y~w~g~s~f------~-----~sg~~~~~~~~~~~~~Pi~vsEyG~~~~~pg~~-~ 287 (555)
T 2w61_A 221 TRDNLARYF-VCGDVKADFYGINMYEWCGYSTY------G-----TSGYRERTKEFEGYPIPVFFSEFGCNLVRPRPF-T 287 (555)
T ss_dssp THHHHHHHT-TBTTCCCSCEEEEECCCCSSCCH------H-----HHSHHHHHHHHTTCSSCEEEEEECCCSSSSCCC-T
T ss_pred hhHHHHHHh-ccCCCCcCEEEEeCCcccccccc------c-----chhHHHHHHHhhCCCCCEEEEeCCCccCCCCch-H
Confidence 111111100 00012345789999974332110 0 001111112223467999999999998543211 1
Q ss_pred HHHHHHHHHHHHCCCceEEeccCceeecccCccCCCceeeeecCC
Q 008330 336 RYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWN 380 (570)
Q Consensus 336 ~~~~~~~~~~~~~gigw~~W~~~G~y~~r~~~~~~~et~Gll~~d 380 (570)
++...+-+-+...-.|-+.|.|- +....|||+..|
T Consensus 288 E~~a~y~~~m~~~~sGG~Ife~~----------dE~nnyGLv~~d 322 (555)
T 2w61_A 288 EVSALYGNKMSSVWSGGLAYMYF----------EEENEYGVVKIN 322 (555)
T ss_dssp HHHHHTSHHHHTTCCEEEESCSB----------CCTTCCCSEEEC
T ss_pred HHHHHHhhcccccccceEEEEEe----------cccCCccceeec
Confidence 22222222223333456788873 225579999876
|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=9e-17 Score=180.49 Aligned_cols=271 Identities=13% Similarity=0.094 Sum_probs=166.2
Q ss_pred eEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhh
Q 008330 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQK 118 (570)
Q Consensus 39 L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~ 118 (570)
++++++.|. -+|++++|||+||.... +....+.....+.++++.||++|+|+||+.. |+.
T Consensus 309 i~~~~~~f~-lNG~~~~l~G~~~h~~~-~~~g~~~~~~~~~~d~~~~k~~G~N~vR~~h---------~p~--------- 368 (613)
T 3hn3_A 309 VAVTKSQFL-INGKPFYFHGVNKHEDA-DIRGKGFDWPLLVKDFNLLRWLGANAFRTSH---------YPY--------- 368 (613)
T ss_dssp EEECSSCEE-ETTEEECEEEEECCSCB-TTTBTCCCHHHHHHHHHHHHHHTCCEEECTT---------SCC---------
T ss_pred EEEECCEEE-ECCEEeeeceeeecCCc-cccCccCCHHHHHHHHHHHHHcCCCEEEccC---------CCC---------
Confidence 444444432 38999999999985321 2222333334467889999999999999821 100
Q ss_pred ccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 008330 119 LGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMA 198 (570)
Q Consensus 119 lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA 198 (570)
-++++++|.++||+||.++|.... . . ..+|.+. ..+.+.+.++.|+
T Consensus 369 -------------------------~~~~~~~cD~~Gi~V~~e~~~~~~----~--~-~~~~~~~--~~~~~~~~~~~~v 414 (613)
T 3hn3_A 369 -------------------------AEEVMQMCDRYGIVVIDECPGVGL----A--L-PQFFNNV--SLHHHMQVMEEVV 414 (613)
T ss_dssp -------------------------CHHHHHHHHHHTCEEEEECSCBCC----C--S-GGGCCHH--HHHHHHHHHHHHH
T ss_pred -------------------------hHHHHHHHHHCCCEEEEecccccc----c--c-ccccChH--HHHHHHHHHHHHH
Confidence 135788999999999999874210 0 0 0112111 1456788999999
Q ss_pred HHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEe-CCCCCCcchhhhhcccCcCCCCCEEEEE
Q 008330 199 TIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILS-GLNFDKDLSFVRNQAVNLTFTGKLVFEA 277 (570)
Q Consensus 199 ~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVe-G~~w~~dl~~~~~~p~~l~~~~nlVys~ 277 (570)
+|++++|.|+++++.|||... .+....+++++++.||+.||.++|+.. ...|..+.. . +.--|+++
T Consensus 415 ~r~~nhPSIi~W~~~NE~~~~---~~~~~~~~~~l~~~~k~~DptRpv~~~~~~~~~~~~~--~--------~~~Dv~~~ 481 (613)
T 3hn3_A 415 RRDKNHPAVVMWSVANEPASH---LESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKG--A--------PYVDVICL 481 (613)
T ss_dssp HHHTTCTTEEEEEEEESCCTT---SHHHHHHHHHHHHHHHHHCTTSCEEEEECSCTTTCSS--G--------GGCSSEEE
T ss_pred HHhCCCCeEEEEecccCcccc---cchHHHHHHHHHHHHHHhCCCCCEEEEcccCcccccc--c--------cccceeEE
Confidence 999999999999999999764 234567788999999999999999984 333332110 0 11237899
Q ss_pred eecCCCCCCCCCCCCC--cchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC----------cchHHHHHHHHHHH
Q 008330 278 HWYGFTDGQAWVDGNP--NQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN----------VNDNRYLNCFFGVA 345 (570)
Q Consensus 278 H~Y~~~~~~~w~~~~~--~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~----------~~~~~~~~~~~~~~ 345 (570)
|.|.. |..... ......+...+ ..+..+.+.|++++|||+....+. .....|++..+..+
T Consensus 482 n~Y~~-----wy~~~~~~~~~~~~l~~~~---~~~~~~~~kPi~isE~G~~~~~g~~~~~~~~~seeyQ~~~~~~~~~~~ 553 (613)
T 3hn3_A 482 NSYYS-----WYHDYGHLELIQLQLATQF---ENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGL 553 (613)
T ss_dssp ECCBT-----TTBSTTCGGGHHHHHHHHH---HHHHHHHCSCEEEEECCCCBCTTCCCSSCCTBSHHHHHHHHHHHHHHH
T ss_pred ecccc-----ccCCCccHHHHHHHHHHHH---HHHHHhcCCCEEEEeeCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHH
Confidence 99963 221111 11111122222 122334589999999999643221 11245555666666
Q ss_pred HHC----CCceEEeccCceeecccCccCCCceeeeecCCCCCc
Q 008330 346 AEL----DWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDI 384 (570)
Q Consensus 346 ~~~----gigw~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~~ 384 (570)
++. -+|++.|++....--..+....+..+||++.+....
T Consensus 554 ~~~~~~~~~G~~~W~~~Df~~~~~~~~~~~n~kGl~~~dr~pK 596 (613)
T 3hn3_A 554 DQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPK 596 (613)
T ss_dssp HTTTTTTEEEEEESCSBCBCCCCBTTBSSSBCCCSBCTTSCBC
T ss_pred HhhcccceEEEEEEEeeecccccCCCcCCCCcCceECCCCCCc
Confidence 542 358999997532111111111246799999876433
|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
Probab=99.68 E-value=6.2e-15 Score=165.19 Aligned_cols=284 Identities=12% Similarity=0.124 Sum_probs=171.2
Q ss_pred eEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhh
Q 008330 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQK 118 (570)
Q Consensus 39 L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~ 118 (570)
++++++.|. -+|++++|||+|+.-.. +....+.....+..+++.||++|+|+||+.- |++
T Consensus 276 v~~~~~~f~-lNG~~~~l~G~~~h~~~-~~~g~~~~~~~~~~di~l~k~~g~N~vR~~h---------yp~--------- 335 (605)
T 3lpf_A 276 VAVKGEQFL-INHKPFYFTGFGRHEDA-DLRGKGFDNVLMVHDHALMDWIGANSYRTSH---------YPY--------- 335 (605)
T ss_dssp EEEETTEEE-ETTEECCEEEEEECSCC-TTTTTCCCHHHHHHHHHHHHHHTCCEEEECS---------SCC---------
T ss_pred EEEcCCEEE-ECCEEEEEEeeecCcCc-ccccccCCHHHHHHHHHHHHHCCCcEEEecC---------CCC---------
Confidence 455555443 48999999999984332 1122223333467889999999999999821 100
Q ss_pred ccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCC------CccccCCCCCCCCCCCCCC---HHH
Q 008330 119 LGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKP------GWCCSNSDGNGFFGDQYFN---PDL 189 (570)
Q Consensus 119 lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~------~w~~~~~dgng~~~d~~~~---~~~ 189 (570)
-+++++.|.++||+||.+++.... +|.++. .....|.....+ .+.
T Consensus 336 -------------------------~~~~~~lcD~~Gi~V~~E~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 389 (605)
T 3lpf_A 336 -------------------------AEEMLDWADEHGIVVIDETAAVGFNLSLGIGFEAGN-KPKELYSEEAVNGETQQA 389 (605)
T ss_dssp -------------------------CHHHHHHHHHHTCEEEEECSCBCCCSSCCCSCCCCC-CCSCSSSTTTSCHHHHHH
T ss_pred -------------------------cHHHHHHHHhcCCEEEEecccccccccccccccccc-CccccccccccCHHHHHH
Confidence 146788999999999999864310 121111 011122221112 345
Q ss_pred HHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCC
Q 008330 190 WIKGLTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTF 269 (570)
Q Consensus 190 ~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~ 269 (570)
+.+.++.|++|++++|.|+++.+.||+.... ..-..+++++++.||+.||.++|..++..+..... ..+.
T Consensus 390 ~~~~~~~~v~r~~NHPSIi~Ws~gNE~~~~~---~~~~~~~~~l~~~~k~~DptRpvt~~~~~~~~~~~----d~~~--- 459 (605)
T 3lpf_A 390 HLQAIKELIARDKNHPSVVMWSIANEPDTRP---QGAREYFAPLAEATRKLDPTRPITCVNVMFCDAHT----DTIS--- 459 (605)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEEEEESCCCCS---TTHHHHHHHHHHHHHHHCSSSCEEEEEETTSCTTT----CSSG---
T ss_pred HHHHHHHHHHHcCCCCeEEEEecCccccccc---chHHHHHHHHHHHHHHHCCCCcEEEeccccCcccc----cccc---
Confidence 6788999999999999999999999997532 22345678889999999999999998754432111 0000
Q ss_pred CCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHH-HHHHhcCCCeEEeccccCCCCC-----C-----cchHHHH
Q 008330 270 TGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLS-GFLLEQGWPLFVSEFGADLRGN-----N-----VNDNRYL 338 (570)
Q Consensus 270 ~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~-g~l~~~g~Pv~iGEFG~~~~~~-----~-----~~~~~~~ 338 (570)
+---|+++|.|.. |..... ..+.....+.+.. .+....+.|++++|||+....+ + +....|+
T Consensus 460 ~~~Dvig~N~Y~g-----wY~~~g--~~~~~~~~l~~~~~~w~~~~~KPiiisEyGa~~~~g~h~~~~~~~sEeyq~~~~ 532 (605)
T 3lpf_A 460 DLFDVLCLNRYYG-----WYVQSG--DLETAEKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSMYTDMWSEEYQCAWL 532 (605)
T ss_dssp GGSSSEEEECCBT-----TTBSTT--CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCTTCCCSSCCTTSHHHHHHHH
T ss_pred cccceeeeccccc-----cccCCC--chHHHHHHHHHHHHHHhhccCCCeEEEeeCCCCCcCcccCCCCCCCHHHHHHHH
Confidence 0112567787742 221100 1122222222211 2222357999999999764221 1 1135778
Q ss_pred HHHHHHHHHCC--CceEEeccCceeecccC-ccCCCceeeeecCCCCCccc
Q 008330 339 NCFFGVAAELD--WDWALWTLVGSYYLREG-VIGLNEYYGLFDWNWCDIRN 386 (570)
Q Consensus 339 ~~~~~~~~~~g--igw~~W~~~G~y~~r~~-~~~~~et~Gll~~dw~~~~~ 386 (570)
+.+++.+++.. +|++.|.+...- ..++ ........||++.|...-..
T Consensus 533 ~~~~~~~~~~~~~~G~~iW~~~Df~-~~~~~~~~~~n~kGl~t~dr~pK~a 582 (605)
T 3lpf_A 533 DMYHRVFDRVSAVVGEQVWNFADFA-TSQGILRVGGNKKGIFTRDRKPKSA 582 (605)
T ss_dssp HHHHHHHTTCTTEEEEEEEEEECBC-BCCBTTBSSSBCCEEECTTCCBCTH
T ss_pred HHHHHHHhcCCcEEEEEEEEeeeec-CccCCccccCCCCccccCCCCCcHH
Confidence 88888888855 689999975211 1111 12235688999988554443
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.8e-13 Score=145.27 Aligned_cols=254 Identities=13% Similarity=0.142 Sum_probs=155.6
Q ss_pred EEEEeeCCCCCCccccCCCCCC----hHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCccc
Q 008330 55 KLACVNWVSHLEPVVAEGLSKQ----PMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQS 130 (570)
Q Consensus 55 ~L~GVNw~g~~~~~v~~Gl~~~----~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~ 130 (570)
.++|+++....+ +-..|.... ..++.++.|+++|+|.|||++ | +.+. +. .
T Consensus 24 f~~G~Dis~~~~-~e~~G~~y~~~~G~~~d~~~ilk~~G~N~VRlrv-w--v~p~---~~-------------------~ 77 (399)
T 1ur4_A 24 FIKGVDVSSIIA-LEESGVAFYNESGKKQDIFKTLKEAGVNYVRVRI-W--NDPY---DA-------------------N 77 (399)
T ss_dssp CEEEEECTTHHH-HHHTTCCCBCTTSCBCCHHHHHHHTTCCEEEEEE-C--SCCB---CT-------------------T
T ss_pred eEEEEehhhhHH-HHHcCCeeeCCCCccchHHHHHHHCCCCEEEEee-e--cCCc---cc-------------------c
Confidence 478999876521 011221111 134678999999999999988 2 1110 00 0
Q ss_pred CCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCC--CCCCCCCCCCCCHH----HHHHHHHHHHHHhCCC
Q 008330 131 NNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNS--DGNGFFGDQYFNPD----LWIKGLTKMATIFNGV 204 (570)
Q Consensus 131 ~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~--dgng~~~d~~~~~~----~~~~~w~~iA~ryk~~ 204 (570)
.+|...+..-++.+.+++++|+++||+||||+|-.+ .|..... ....|-+ .+.+ .+.++=+.++++++.+
T Consensus 78 g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldfHysD-~WadPg~Q~~P~aW~~---~~~~~l~~~~~~yt~~~l~~l~~~ 153 (399)
T 1ur4_A 78 GNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSD-FWADPAKQKAPKAWAN---LNFEDKKTALYQYTKQSLKAMKAA 153 (399)
T ss_dssp CCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSS-SCCSSSCCCCCGGGTT---CCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCccCCCCCCHHHHHHHHHHHHHCCCEEEEEeccCC-ccCCcccccCcccccc---CCHHHHHHHHHHHHHHHHHHHHhc
Confidence 011111112368899999999999999999999753 4532211 0112322 2333 3344555678888765
Q ss_pred C-cEEEEeccCCCCCCC---CChhHHHHHHHHHHHHHHhcCCCcEEEEeCCC-CCCc-----chhhhhcccCcCCCCCEE
Q 008330 205 R-NVVGMSLRNELRGPK---QNVKDWYRYMQLGAEAVHAANPEVLVILSGLN-FDKD-----LSFVRNQAVNLTFTGKLV 274 (570)
Q Consensus 205 p-~Vig~dL~NEP~~~~---~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~-w~~d-----l~~~~~~p~~l~~~~nlV 274 (570)
. .+-.+.+.||+.... .+.....+++.+++++||+++|+..|++--.+ ++.+ +..+....++ --|
T Consensus 154 g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~~~~~~~~~~~d~l~~~g~d-----~Dv 228 (399)
T 1ur4_A 154 GIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETSGRYAWIAETLHRHHVD-----YDV 228 (399)
T ss_dssp TCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTSTTHHHHHHHHHHHTTCC-----CSE
T ss_pred CCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCCcchHHHHHHHHHHHHcCCC-----cCe
Confidence 4 355799999997632 24566777889999999999999988774322 2211 1222222222 348
Q ss_pred EEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC---------------------cc
Q 008330 275 FEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN---------------------VN 333 (570)
Q Consensus 275 ys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~---------------------~~ 333 (570)
+.+|+|++.. . ....+.+.+.+.. .+.+.||+|.|+|......+ ..
T Consensus 229 IG~syYp~W~-----~-----~l~~l~~~l~~l~---~rygKpV~v~EtG~~~~~~~~d~~~n~~~~~~~~~~~~~s~~g 295 (399)
T 1ur4_A 229 FASSYYPFWH-----G-----TLKNLTSVLTSVA---DTYGKKVMVAETSYTYTAEDGDGHGNTAPKNGQTLNNPVTVQG 295 (399)
T ss_dssp EEEEECTTTS-----C-----CHHHHHHHHHHHH---HHHCCEEEEEEECCCSCSCCSSSSCCSSSCTTSCCCSCSSHHH
T ss_pred EeEecCccch-----h-----hHHHHHHHHHHHH---HHhCCcEEEEEecCCccCCCCCCcccccccccccCCCCCCHHH
Confidence 9999998532 1 1233444444311 23689999999999874211 13
Q ss_pred hHHHHHHHHHHHHHC---CCceEEec
Q 008330 334 DNRYLNCFFGVAAEL---DWDWALWT 356 (570)
Q Consensus 334 ~~~~~~~~~~~~~~~---gigw~~W~ 356 (570)
..+|++.+++.+++. +.|-+||.
T Consensus 296 Qa~~l~~l~~~v~~~~~~g~GvfyWe 321 (399)
T 1ur4_A 296 QANAVRDVIQAVSDVGEAGIGVFYWE 321 (399)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred HHHHHHHHHHHHHhccCceEEEEEEc
Confidence 579999999998876 46788887
|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.53 E-value=5.3e-13 Score=151.25 Aligned_cols=261 Identities=16% Similarity=0.143 Sum_probs=154.4
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
+|++++|+|+|+... .+..........++.+++.||++|+|+||+.- + .
T Consensus 279 NGk~~~l~G~n~h~~-~~~~G~~~~~~~~~~dl~~~k~~G~N~vR~~h-~--------p--------------------- 327 (667)
T 3cmg_A 279 NGKHLPLHGVCRHQD-RAEVGNALRPQHHEEDVALMREMGVNAIRLAH-Y--------P--------------------- 327 (667)
T ss_dssp TTEECCCEEEECCSC-BTTTBTCCCHHHHHHHHHHHHHTTCCEEEETT-S--------C---------------------
T ss_pred CCEEEEEEEEEcCcC-ccccccCCCHHHHHHHHHHHHHCCCCEEEecC-C--------C---------------------
Confidence 899999999998422 11111122223467889999999999999831 1 0
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEE
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVV 208 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vi 208 (570)
. -+++++.|.++||+||.+++... .+|. ...+..+.. -.+.+.+.++.|++|++++|.|+
T Consensus 328 ----~---------~~~~~~~cD~~Gl~V~~e~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~v~r~rNHPSIi 388 (667)
T 3cmg_A 328 ----Q---------ATYMYDLMDKHGIVTWAEIPFVGPGGYA-----DKGFVDQAS-FRENGKQQLIELIRQHYNHPSIC 388 (667)
T ss_dssp ----C---------CHHHHHHHHHHTCEEEEECCCBCCTTSS-----SCSCCCSHH-HHHHHHHHHHHHHHHHTTCTTEE
T ss_pred ----C---------CHHHHHHHHHCCCEEEEcccccCcCccc-----cccccCCHH-HHHHHHHHHHHHHHHcCCCCEEE
Confidence 0 14678899999999999986422 1221 111111111 13466788899999999999999
Q ss_pred EEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEEEEEeecCCCCCCCC
Q 008330 209 GMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAW 288 (570)
Q Consensus 209 g~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w 288 (570)
++++.||+...... ...+++++.+.||+.||.++|..... |...+. + .--|+++|.|.. |
T Consensus 389 ~W~~gNE~~~~~~~---~~~~~~~l~~~vk~~DptRpvt~~~~-~~~~~~-----~------~~Dv~~~n~Y~~-----w 448 (667)
T 3cmg_A 389 FWGLFNELKEVGDN---PVEYVKELNALAKQEDPTRPTTSASN-QDGNLN-----F------ITENIAWNRYDG-----W 448 (667)
T ss_dssp EEEEEESCCSSSSC---CHHHHHHHHHHHHHHCTTSCEEEEEC-CCSGGG-----G------SSSSEEEECCTT-----T
T ss_pred EEecccCCCccchh---HHHHHHHHHHHHHHHCCCCcEEEeCC-CCCccc-----c------ccCEEEeccccc-----c
Confidence 99999999753111 23456778899999999999988643 322110 0 122689999963 2
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCC---------CCCc--------chHHHHHHHHHHHHHCC--
Q 008330 289 VDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLR---------GNNV--------NDNRYLNCFFGVAAELD-- 349 (570)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~---------~~~~--------~~~~~~~~~~~~~~~~g-- 349 (570)
.... +..+...++.... ...+.|++++|||.... +... ....+++.+.+.++++.
T Consensus 449 y~~~----~~~~~~~~~~~~~--~~p~kPi~~sEyG~~~~~~~~~~~~~~~~~~~~~~~e~~q~~~~~~~~~~~~~~~~~ 522 (667)
T 3cmg_A 449 YGST----PKTLATFLDRTHK--KHPELRIGISEYGAGASIYHQQDSLKQPSASGWWHPENWQTYYHMENWKIIAERPFV 522 (667)
T ss_dssp SSSC----THHHHHHHHHHHH--HCTTCCEEEEEECCCCBTTCCCSSCCCCCTTSSCCBHHHHHHHHHHHHHHHHTCTTC
T ss_pred ccCc----hhhhHHHHHHHHH--HCCCCcEEEEEECCCCCcccccccccccccccccCcHHHHHHHHHHHHHHHhcCCCc
Confidence 2211 1122222221100 11479999999997432 1000 11234455666666553
Q ss_pred CceEEeccCceee-ccc-CccCCCceeeeecCCCCCccc
Q 008330 350 WDWALWTLVGSYY-LRE-GVIGLNEYYGLFDWNWCDIRN 386 (570)
Q Consensus 350 igw~~W~~~G~y~-~r~-~~~~~~et~Gll~~dw~~~~~ 386 (570)
+|-++|++...-- .++ +....-...||++.|...+..
T Consensus 523 ~G~fvW~~~D~~~~~~~~g~~~~~~~~Gl~~~dr~~~k~ 561 (667)
T 3cmg_A 523 WGTFVWNMFDFGAAHRTEGDRPGINDKGLVTFDRKVRKD 561 (667)
T ss_dssp CCEEESCSBCEECTTCCCTTSTTEECCCSBCTTSCCBCH
T ss_pred EEEEEeeeeccCCccccCCCCCCcccceeEccCCccCch
Confidence 5888998752210 011 111111246899887544443
|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=3.9e-13 Score=139.83 Aligned_cols=253 Identities=13% Similarity=0.099 Sum_probs=150.4
Q ss_pred HHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEE
Q 008330 79 DMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~V 158 (570)
++.++.|+++|+|+|||++- ..+ + .+...++.+++++++|+++||+|
T Consensus 30 ~d~~~ilk~~G~N~VRi~~w---~~P--~----------------------------~g~~~~~~~~~~~~~A~~~GlkV 76 (332)
T 1hjs_A 30 QPLENILAANGVNTVRQRVW---VNP--A----------------------------DGNYNLDYNIAIAKRAKAAGLGV 76 (332)
T ss_dssp CCHHHHHHHTTCCEEEEEEC---SSC--T----------------------------TCTTSHHHHHHHHHHHHHTTCEE
T ss_pred ccHHHHHHHCCCCEEEEeee---eCC--C----------------------------CCcCCHHHHHHHHHHHHHCCCEE
Confidence 35688899999999999872 111 1 01124688999999999999999
Q ss_pred EEecCCCCCCccccC--CCCCCCCCCCCC--CHHHHHHHHHHHHHHhCCCC-cEEEEeccCCCCCC----C---CChhHH
Q 008330 159 ILDNHISKPGWCCSN--SDGNGFFGDQYF--NPDLWIKGLTKMATIFNGVR-NVVGMSLRNELRGP----K---QNVKDW 226 (570)
Q Consensus 159 ILD~H~~~~~w~~~~--~dgng~~~d~~~--~~~~~~~~w~~iA~ryk~~p-~Vig~dL~NEP~~~----~---~~~~~W 226 (570)
|||+|..+ .|.... ..... |.+ .+ -.+.+.++-+.++++++... .+..+.+.||+... . .+.+..
T Consensus 77 ~ld~Hysd-~WadPg~Q~~p~~-W~~-~~~~~~~~~~~yt~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~ 153 (332)
T 1hjs_A 77 YIDFHYSD-TWADPAHQTMPAG-WPS-DIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANI 153 (332)
T ss_dssp EEEECCSS-SCCBTTBCBCCTT-CCC-SHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHH
T ss_pred EEEeccCC-CcCCccccCCccc-ccc-chHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHH
Confidence 99999853 453211 11112 322 11 12444555566666665321 22336667776531 1 245667
Q ss_pred HHHHHHHHHHHHhcC--CCcEEEEeCCC-CCCc-c----hhhhhcc-cCcCCCCCEEEEEeecCCCCCCCCCCCCCcchh
Q 008330 227 YRYMQLGAEAVHAAN--PEVLVILSGLN-FDKD-L----SFVRNQA-VNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVC 297 (570)
Q Consensus 227 ~~~~~~~~~aIr~~d--p~~lIiVeG~~-w~~d-l----~~~~~~p-~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~ 297 (570)
.+++++++++||+++ |+..|++.-.. ++.+ . ..+.... + ...+--|+.+|+|++.. ... ..
T Consensus 154 ~~l~~~~~~avR~~~~~p~~~v~ih~~~~~~~~~~~~~~d~~~~~g~~--~~~~~DvIG~syYp~w~-----~~~---~~ 223 (332)
T 1hjs_A 154 ARLLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQNWWYTNVLKQGTL--ELSDFDMMGVSFYPFYS-----SSA---TL 223 (332)
T ss_dssp HHHHHHHHHHHHTSCCSSCCEEEEEESCTTCHHHHHHHHHHHHTTSSS--CGGGCCEEEEECCSSSC-----TTC---CH
T ss_pred HHHHHHHHHHHHHhccCCCCeEEEEeCCccchHHHHHHHHHHHhcCCC--CCCCcCEEEEecCcccC-----CCC---CH
Confidence 788899999999999 99888874322 2111 1 1111111 2 01134488999998532 111 12
Q ss_pred hHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC----------------cchHHHHHHHHHHHHHC--CCceEEeccCc
Q 008330 298 GRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN----------------VNDNRYLNCFFGVAAEL--DWDWALWTLVG 359 (570)
Q Consensus 298 ~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~----------------~~~~~~~~~~~~~~~~~--gigw~~W~~~G 359 (570)
+.+...+.+.. .+.+.||+|.|+|++..+.. +.+..|++.+++.+++. ++|-+||...
T Consensus 224 ~~l~~~l~~~~---~rygKpv~v~EtG~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~l~~~~~~~~~~~~~~G~fyWep~- 299 (332)
T 1hjs_A 224 SALKSSLDNMA---KTWNKEIAVVETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSSVSRGVGLFYWEPA- 299 (332)
T ss_dssp HHHHHHHHHHH---HHHCCEEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEECTT-
T ss_pred HHHHHHHHHHH---HHHCCCEEEEEccCccCCCCCcccccccccCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEEccc-
Confidence 33444444321 23689999999999864321 12478999999999887 5678888743
Q ss_pred eeecccCccCCCceeeeecCCCC
Q 008330 360 SYYLREGVIGLNEYYGLFDWNWC 382 (570)
Q Consensus 360 ~y~~r~~~~~~~et~Gll~~dw~ 382 (570)
++-..+..+.-+..||++.+..
T Consensus 300 -w~~~~g~g~~~~~~glfd~~g~ 321 (332)
T 1hjs_A 300 -WIHNANLGSSCADNTMFSQSGQ 321 (332)
T ss_dssp -CGGGTTTTSSSSBCCSBCTTSB
T ss_pred -cccCCCCCCcCCCCceECCCCC
Confidence 1111121223355689887744
|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.2e-12 Score=136.25 Aligned_cols=253 Identities=15% Similarity=0.152 Sum_probs=155.0
Q ss_pred HHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEE
Q 008330 79 DMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~V 158 (570)
+++++.|+++|+|+|||-+- +.+ . +. ...++.+.++++.|+++||+|
T Consensus 30 ~~~~~ilk~~G~n~vRlri~---v~P--~-------------------------~g---~~d~~~~~~~~~~ak~~Gl~v 76 (334)
T 1fob_A 30 QALETILADAGINSIRQRVW---VNP--S-------------------------DG---SYDLDYNLELAKRVKAAGMSL 76 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEEC---SCC--T-------------------------TC---TTCHHHHHHHHHHHHHTTCEE
T ss_pred chHHHHHHHcCCCEEEEEEE---ECC--C-------------------------CC---ccCHHHHHHHHHHHHHCCCEE
Confidence 45689999999999999541 111 0 01 123678999999999999999
Q ss_pred EEecCCCCCCccccC--CCCCCCCCCCC-CCHHHHHHHHHHHHHHhCCCC-cEEEEeccCCCCCCC-------CChhHHH
Q 008330 159 ILDNHISKPGWCCSN--SDGNGFFGDQY-FNPDLWIKGLTKMATIFNGVR-NVVGMSLRNELRGPK-------QNVKDWY 227 (570)
Q Consensus 159 ILD~H~~~~~w~~~~--~dgng~~~d~~-~~~~~~~~~w~~iA~ryk~~p-~Vig~dL~NEP~~~~-------~~~~~W~ 227 (570)
|||+|..+ .|.... ....+|-+... ...+.+.++-+.+++++++.. .|..+.+.|||.... .+.....
T Consensus 77 ~ld~hysd-~wadP~~q~~p~~W~~~~~~~~~~~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~ 155 (334)
T 1fob_A 77 YLDLHLSD-TWADPSDQTTPSGWSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIG 155 (334)
T ss_dssp EEEECCSS-SCCBTTBCBCCTTSCSSCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHH
T ss_pred EEEeccCC-CCCCcccccCccccccCChHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHH
Confidence 99999853 332110 11123332110 013455566677888998753 345688999997531 1356677
Q ss_pred HHHHHHHHHHHhcC--CCcEEEEeCCC-CCCc-ch-h---hhhcc-cCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhh
Q 008330 228 RYMQLGAEAVHAAN--PEVLVILSGLN-FDKD-LS-F---VRNQA-VNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCG 298 (570)
Q Consensus 228 ~~~~~~~~aIr~~d--p~~lIiVeG~~-w~~d-l~-~---~~~~p-~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~ 298 (570)
++..+++++||+++ |+..|++--.. ++.+ .. + +.... + ...+--|+.+|+|++... . ...+
T Consensus 156 ~~~~~a~~avr~~~~~p~~~v~~h~~~~~~~~~~~~~~~~~~~~g~~--~~~~~DvIG~syYp~w~~-----~---~~~~ 225 (334)
T 1fob_A 156 ALLHSGAWGVKDSNLATTPKIMIHLDDGWSWDQQNYFYETVLATGEL--LSTDFDYFGVSYYPFYSA-----S---ATLA 225 (334)
T ss_dssp HHHHHHHHHHHTSCCSSCCEEEEEESCTTCHHHHHHHHHHHHHTSSS--CGGGCCEEEEECCSSSCT-----T---CCHH
T ss_pred HHHHHHHHHHHHhccCCCCeEEEEcCCcCchHHHHHHHHHHHHcCCC--CCCCcCEEEEeCCCCcCC-----C---CCHH
Confidence 88899999999999 98777763321 2211 00 1 11111 1 001335889999985431 1 1233
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCc----------------chHHHHHHHHHHHHHC--CCceEEeccCce
Q 008330 299 RVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNV----------------NDNRYLNCFFGVAAEL--DWDWALWTLVGS 360 (570)
Q Consensus 299 ~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~----------------~~~~~~~~~~~~~~~~--gigw~~W~~~G~ 360 (570)
.+...+.+.. .+.+.||+|.|+|+...+... .+..|++.+++.+.+. +.|.+||.+.
T Consensus 226 ~l~~~l~~~~---~rygKpv~itEtG~~~~~d~~~~~~~~~~~~~~~s~~~Q~~~l~~~~~~v~~~~~~~G~f~We~~-- 300 (334)
T 1fob_A 226 SLKTSLANLQ---STYDKPVVVVETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYWEPA-- 300 (334)
T ss_dssp HHHHHHHHHH---HHHCCCEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEECTT--
T ss_pred HHHHHHHHHH---HHHCCCEEEEEcccccCCCCccccccccccCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEECcc--
Confidence 4444444321 236899999999998643221 1378999999998876 4688999963
Q ss_pred eecccCccCCCceeeeecCC
Q 008330 361 YYLREGVIGLNEYYGLFDWN 380 (570)
Q Consensus 361 y~~r~~~~~~~et~Gll~~d 380 (570)
++...|..+..+.+||++.+
T Consensus 301 w~~~~g~g~~~~~~glfd~~ 320 (334)
T 1fob_A 301 WIGNAGLGSSCADNLMVDYT 320 (334)
T ss_dssp CTTCTTTTSSSSBCCSBCTT
T ss_pred cccCCCCCCccCCCCcEeCC
Confidence 22111222334789998865
|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.46 E-value=4.2e-12 Score=143.97 Aligned_cols=227 Identities=13% Similarity=0.107 Sum_probs=147.4
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
+|++++|||+|+.... +..........++.+++.||++|+|+||+.- + +
T Consensus 293 NG~~i~l~G~n~h~~~-~~~G~~~~~e~~~~dl~l~k~~G~N~iR~~h-~--------p--------------------- 341 (692)
T 3fn9_A 293 NGEKYSMYGVTRHQDW-WGLGSALKNEHHDFDLAAIMDVGATTVRFAH-Y--------Q--------------------- 341 (692)
T ss_dssp TTEECCCEEEECCSCB-TTTBTCCCHHHHHHHHHHHHHHTCCEEEETT-S--------C---------------------
T ss_pred CCeeeeeeccccCCCc-ccccccccHHHHHHHHHHHHHCCCCEEEecC-C--------C---------------------
Confidence 8999999999985321 1111222333467889999999999999931 1 0
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEE
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVG 209 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig 209 (570)
. -+++++.|.++||+||.++... + . +.+. . .+.+.+.++.|++|++++|.|++
T Consensus 342 ----~---------~~~~~dlcDe~Gi~V~~E~~~~----~-~-------~~~~-~-~~~~~~~~~~~v~r~rNHPSIi~ 394 (692)
T 3fn9_A 342 ----Q---------SDYLYSRCDTLGLIIWAEIPCV----N-R-------VTGY-E-TENAQSQLRELIRQSFNHPSIYV 394 (692)
T ss_dssp ----C---------CHHHHHHHHHHTCEEEEECCCB----S-C-------CCSS-C-HHHHHHHHHHHHHHHTTCTTEEE
T ss_pred ----C---------cHHHHHHHHHCCCEEEEccccc----C-C-------CCCH-H-HHHHHHHHHHHHHHhcCCCcceE
Confidence 0 1567899999999999997421 1 1 2222 2 67788999999999999999999
Q ss_pred EeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEEEEEeecCCCCCCCCC
Q 008330 210 MSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWV 289 (570)
Q Consensus 210 ~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~ 289 (570)
+++.||+... ...-..+++++.+.+|+.||.++|..+...+..+- +.. ..--|+++|.|.- |.
T Consensus 395 Ws~gNE~~~~---~~~~~~~~~~l~~~~k~~DptRpvt~~~~~~~~~~------~~~---~~~Dv~~~n~Y~g-----WY 457 (692)
T 3fn9_A 395 WGLHNEVYQP---HEYTAALTRSLHDLAKTEDPDRYTVSVNGYGHMDH------PVN---LNADIQGMNRYFG-----WY 457 (692)
T ss_dssp EEEEESCCSS---HHHHHHHHHHHHHHHHHHCTTSEEEEEESSSCTTC------TTC---SSSSEEEEECCBT-----TT
T ss_pred EEeccccCcc---cccHHHHHHHHHHHHHHHCCCCCEEEeCCCccccc------ccc---ccCCccccccccc-----cc
Confidence 9999999753 23445677889999999999999998775432110 000 1223789998852 22
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHh-cCCCeEEeccccCC---------C-----CCCcc----hHHHHHHHHHHHHHCC-
Q 008330 290 DGNPNQVCGRVVDNVMRLSGFLLE-QGWPLFVSEFGADL---------R-----GNNVN----DNRYLNCFFGVAAELD- 349 (570)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~g~l~~-~g~Pv~iGEFG~~~---------~-----~~~~~----~~~~~~~~~~~~~~~g- 349 (570)
.... +.+...++. +-.. .+.|++++|||... . ++... ...+++...+.++++.
T Consensus 458 ~~~~----~~~~~~~~~---~~~~~p~kPii~sEyG~~~~~g~~~~~~~~~~~~~~~~~see~Q~~~~~~~~~~~~~~p~ 530 (692)
T 3fn9_A 458 EKKI----QDIKPWVEQ---LEKDYPYQKLMLTEYGADANLAHQTEYLGDALNWGKPFYPETFQTKTHEYQWSIIKDHPY 530 (692)
T ss_dssp BSCG----GGHHHHHHH---HHHHCTTCCEEEEECCCCCBTTCCCSCCCSCCCSSSSCCBHHHHHHHHHHHHHHHHHCTT
T ss_pred CCch----HHHHHHHHH---HHHHhcCccEEEEEEcCCcccccccccccccccccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 2111 122222221 1111 47999999999841 1 00001 1345566677777765
Q ss_pred -CceEEeccC
Q 008330 350 -WDWALWTLV 358 (570)
Q Consensus 350 -igw~~W~~~ 358 (570)
+|-+.|++-
T Consensus 531 ~~G~fvW~~~ 540 (692)
T 3fn9_A 531 IIASYLWNMF 540 (692)
T ss_dssp SCEEEESCSB
T ss_pred eEEEEEEEee
Confidence 477888875
|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.40 E-value=3.6e-12 Score=136.40 Aligned_cols=259 Identities=14% Similarity=0.171 Sum_probs=156.1
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|++++|..+.++ +.-.+.+.++.++++|++|.++||.
T Consensus 52 ~~eDi~lm~~~G~~~~R~si~W~ri~P~---------------------------~g~~n~~gl~~yd~lid~l~~~GI~ 104 (423)
T 1vff_A 52 YRDDIQLMTSLGYNAYRFSIEWSRLFPE---------------------------ENKFNEDAFMKYREIIDLLLTRGIT 104 (423)
T ss_dssp HHHHHHHHHHHTCCEEEEECCHHHHCSB---------------------------TTBCCHHHHHHHHHHHHHHHHTTCE
T ss_pred cHHHHHHHHHcCCCEEEeecCHHHhCCC---------------------------CCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 5889999999999999999999766542 1224567899999999999999999
Q ss_pred EEEecCCC-CCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCC------------C-CCh
Q 008330 158 VILDNHIS-KPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP------------K-QNV 223 (570)
Q Consensus 158 VILD~H~~-~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~------------~-~~~ 223 (570)
+||++|+. .|.|.... .+ |.++ ...+.|.++|+.+++||++ |..+.++|||... . ...
T Consensus 105 pivtL~H~d~P~~l~~~---gg-w~~~-~~~~~f~~ya~~~~~r~gd---V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 176 (423)
T 1vff_A 105 PLVTLHHFTSPLWFMKK---GG-FLRE-ENLKHWEKYIEKVAELLEK---VKLVATFNEPMVYVMMGYLTAYWPPFIRSP 176 (423)
T ss_dssp EEEEEESSCCBHHHHHT---TG-GGSG-GGHHHHHHHHHHHHHHTTT---CCEEEEEECHHHHHHHHHTSCSSTTCCCCH
T ss_pred EEEEccCCcccHHHHhc---CC-CCCH-HHHHHHHHHHHHHHHHhCC---CceEEEecCcchhhhccccccccCCCccch
Confidence 99999864 45554321 23 3333 2478999999999999999 7789999999631 1 122
Q ss_pred hHHHH-------HHHHHHHHHHhcCCCcEEEEeCCC-C---CC--cchhhh----------hccc-------C------c
Q 008330 224 KDWYR-------YMQLGAEAVHAANPEVLVILSGLN-F---DK--DLSFVR----------NQAV-------N------L 267 (570)
Q Consensus 224 ~~W~~-------~~~~~~~aIr~~dp~~lIiVeG~~-w---~~--dl~~~~----------~~p~-------~------l 267 (570)
...+. ...++++++|+ +.+.=|++.... + +. |..... ..|+ . +
T Consensus 177 ~~~~~a~h~ll~Aha~Av~~~r~-~~~iG~~~~~~~~~P~~~~~~d~~aa~~~~~~~~~~f~d~~~~G~yp~~~~~~~~i 255 (423)
T 1vff_A 177 FKAFKVAANLLKAHAIAYELLHG-KFKVGIVKNIPIILPASDKERDRKAAEKADNLFNWHFLDAIWSGKYRGVFKTYRIP 255 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECCEEEESSSSHHHHHHHHHHHHHHTHHHHHHHHHCEEECSSCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cCceEEEEeCCceecCCCCHHHHHHHHHHHHHHHHHHhhHhhccccchhcCccHhh
Confidence 23332 22456777887 554444443321 0 11 110000 0111 0 0
Q ss_pred CCCCCEEEEEeecCCCCCC---------------CC--CCC--CCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCC
Q 008330 268 TFTGKLVFEAHWYGFTDGQ---------------AW--VDG--NPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLR 328 (570)
Q Consensus 268 ~~~~nlVys~H~Y~~~~~~---------------~w--~~~--~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~ 328 (570)
-..--.+.+|+|...... .+ ... ...-.+..+...+. ++.+.+.||+|+|.|+...
T Consensus 256 -~~~~DfiGinyY~~~~v~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~P~gl~~~L~----~~~rY~~Pi~ITENG~~~~ 330 (423)
T 1vff_A 256 -QSDADFIGVNYYTASEVRHTWNPLKFFFEVKLADISERKTQMGWSVYPKGIYMALK----KASRYGRPLYITENGIATL 330 (423)
T ss_dssp -CCCCSCEEEECCCEEEEEECSCGGGTTEEEEECCCSSSCCTTCCCCCTHHHHHHHH----HHGGGCSCEEEEECCCCCS
T ss_pred -cCCCCEEEEccccceeeeccCCCCCccccccCCCCCCCCCCCCCccCHHHHHHHHH----HHHHcCCCEEEEeCCCCCC
Confidence 011235677777532110 00 000 00012333444333 2323566999999999765
Q ss_pred CCCcchHHHHHHHHHHHH---HCCC---ceEEeccCceeecccCccCCCceeeeecCCC
Q 008330 329 GNNVNDNRYLNCFFGVAA---ELDW---DWALWTLVGSYYLREGVIGLNEYYGLFDWNW 381 (570)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~---~~gi---gw~~W~~~G~y~~r~~~~~~~et~Gll~~dw 381 (570)
+ +..+..|++..+..+. +.|+ |++.|++-..|-.. .+....|||+.-|.
T Consensus 331 d-D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn~eW~---~gy~~RfGl~~VD~ 385 (423)
T 1vff_A 331 D-DEWRVEFIIQHLQYVHKAIEDGLDVRGYFYWSFMDNYEWK---EGFGPRFGLVEVDY 385 (423)
T ss_dssp C-HHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCCCGG---GTTCCCCCSEEECT
T ss_pred c-cHHHHHHHHHHHHHHHHHHHcCCCEEEEEecCCCcccccc---cCCCCCCcEEEecC
Confidence 4 4446677777665533 4564 79999986544322 34567899985443
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.4e-11 Score=139.18 Aligned_cols=125 Identities=20% Similarity=0.341 Sum_probs=85.4
Q ss_pred EEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecc-cccccccCccccchhhhhhhhccchhhccCcccCCCCC
Q 008330 57 ACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTW-PLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSI 135 (570)
Q Consensus 57 ~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi-~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~ 135 (570)
.|+++. |+-+.....+++++.||++|||+||+++ .|..+++. |..
T Consensus 2 ~G~~y~-------pe~w~~~~~~~dl~~mk~~G~N~vR~~if~W~~~eP~---------------------------~g~ 47 (645)
T 1kwg_A 2 LGVCYY-------PEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPE---------------------------PGR 47 (645)
T ss_dssp EEEECC-------GGGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSB---------------------------TTB
T ss_pred CCCcCC-------cccCCHHHHHHHHHHHHHcCCCEEEEeeechhhcCCC---------------------------CCc
Confidence 467653 3333223478999999999999999985 76544331 111
Q ss_pred CCchHHHHHHHHHHHHhcCCCEEEEec-CCCCCCcccc--------CCCCC-CCCCCC----CCC---HHHHHHHHHHHH
Q 008330 136 VDLPLIKAFQAVVASLGNNNVMVILDN-HISKPGWCCS--------NSDGN-GFFGDQ----YFN---PDLWIKGLTKMA 198 (570)
Q Consensus 136 ~~~t~l~~ld~vV~~a~~~Gl~VILD~-H~~~~~w~~~--------~~dgn-g~~~d~----~~~---~~~~~~~w~~iA 198 (570)
.+ ++.+|++|+.|.++||+||+++ |...|.|... ..+|. ..|+.. ..+ .+.+.++++.|+
T Consensus 48 ~d---~~~ld~~ld~a~~~Gi~vil~~~~~~~P~Wl~~~~P~~~~~~~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~ 124 (645)
T 1kwg_A 48 LE---WGWLDEAIATLAAEGLKVVLGTPTATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLA 124 (645)
T ss_dssp CC---CHHHHHHHHHHHTTTCEEEEECSTTSCCHHHHHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHH
T ss_pred cC---hHHHHHHHHHHHHCCCEEEEeCCCCCCChhHhhcCCceeeeCCCCcCcccCccccCCCCCHHHHHHHHHHHHHHH
Confidence 22 3568999999999999999999 5555555321 11121 111111 122 356678899999
Q ss_pred HHhCCCCcEEEEeccCCCCC
Q 008330 199 TIFNGVRNVVGMSLRNELRG 218 (570)
Q Consensus 199 ~ryk~~p~Vig~dL~NEP~~ 218 (570)
+||+++|.|+++++.|||..
T Consensus 125 ~ry~~~p~V~~w~i~NE~~~ 144 (645)
T 1kwg_A 125 ERYGGLEAVAGFQTDNEYGC 144 (645)
T ss_dssp HHHTTCTTEEEEECSSSTTT
T ss_pred HHhCCCCcEEEEEecCcCCC
Confidence 99999999999999999975
|
| >2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... | Back alignment and structure |
|---|
Probab=99.37 E-value=1.3e-11 Score=133.48 Aligned_cols=136 Identities=10% Similarity=0.055 Sum_probs=100.0
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|++++|..+.++ | +.-.+...++.++++|+++.++||.
T Consensus 83 ~~eDi~lm~~~G~~~~R~si~W~Ri~P~---------------------G-----~g~~n~~gl~~yd~lid~l~~~GI~ 136 (468)
T 2j78_A 83 WKEDIEIIEKLGVKAYRFSISWPRILPE---------------------G-----TGRVNQKGLDFYNRIIDTLLEKGIT 136 (468)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHSTT---------------------S-----SSCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHcCCCEEEeccCHHHhCCC---------------------C-----CCCcCHHHHHHHHHHHHHHHhcCCE
Confidence 5899999999999999999999766542 0 2234667899999999999999999
Q ss_pred EEEecCC-CCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCC------------CC-CCh
Q 008330 158 VILDNHI-SKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG------------PK-QNV 223 (570)
Q Consensus 158 VILD~H~-~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~------------~~-~~~ 223 (570)
+||++|+ ..|.|.... .+| .++ ...+.|.++|+.+++||++. |..+.++|||.. +. .+.
T Consensus 137 pivtL~H~d~P~~l~~~---ggw-~~~-~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 209 (468)
T 2j78_A 137 PFVTIYHWDLPFALQLK---GGW-ANR-EIADWFAEYSRVLFENFGDR--VKNWITLNEPWVVAIVGHLYGVHAPGMRDI 209 (468)
T ss_dssp EEEEEESSCCBHHHHTT---TGG-GST-THHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCH
T ss_pred EEEEccCCCCchhhhhc---CCC-CCh-HHHHHHHHHHHHHHHHhCCc--cceEEEccccchhhccccccccCCCCcccH
Confidence 9999965 455554321 243 333 24789999999999999994 667999999963 11 111
Q ss_pred hHH-------HHHHHHHHHHHHhcCCCcEE
Q 008330 224 KDW-------YRYMQLGAEAVHAANPEVLV 246 (570)
Q Consensus 224 ~~W-------~~~~~~~~~aIr~~dp~~lI 246 (570)
..- .....++++++|+++|+.-|
T Consensus 210 ~~~~~a~h~~llAha~Av~~~r~~~~~~~I 239 (468)
T 2j78_A 210 YVAFRAVHNLLRAHARAVKVFRETVKDGKI 239 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 111 12235778899999997543
|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
Probab=99.37 E-value=4.5e-12 Score=148.69 Aligned_cols=145 Identities=14% Similarity=0.028 Sum_probs=101.2
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
+|++++|||+||..+. ..........+..+++.||++|+|+||+.. |++
T Consensus 348 NGk~i~lrGvn~h~~~--~~G~~~~~e~~~~dl~lmK~~G~N~IR~~h---------yp~-------------------- 396 (1010)
T 3bga_A 348 NGVPVLVKGTNRHEHS--QLGRTVSKELMEQDIRLMKQHNINMVRNSH---------YPT-------------------- 396 (1010)
T ss_dssp TTEECCEEEEEECCCB--TTBSCCCHHHHHHHHHHHHHTTCCEEEETT---------SCC--------------------
T ss_pred CCceEEEECcccCCcc--cccCcCCHHHHHHHHHHHHHCCCCEEEeCC---------CCC--------------------
Confidence 9999999999986543 112223334467889999999999999831 110
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEE
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVG 209 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig 209 (570)
-+++++.|.++||+||.++-. |+.+..-+.....+...-.+.+.+.++.|++|++++|.|++
T Consensus 397 --------------~~~~ydlcDe~Gi~V~~E~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~mV~r~rNHPSIi~ 458 (1010)
T 3bga_A 397 --------------HPYWYQLCDRYGLYMIDEANI----ESHGMGYGPASLAKDSTWLTAHMDRTHRMYERSKNHPAIVI 458 (1010)
T ss_dssp --------------CHHHHHHHHHHTCEEEEECSC----BCGGGCSSTTCTTTCGGGHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred --------------CHHHHHHHHHCCCEEEEccCc----cccCccccCCcCCCCHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 135778999999999998621 11110000011111111246678899999999999999999
Q ss_pred EeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCC
Q 008330 210 MSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGL 251 (570)
Q Consensus 210 ~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~ 251 (570)
+++.||+... ..++++++.||+.||.++|..++.
T Consensus 459 WslgNE~~~g--------~~~~~l~~~ik~~DptRpV~~~~~ 492 (1010)
T 3bga_A 459 WSQGNEAGNG--------INFERTYDWLKSVEKGRPVQYERA 492 (1010)
T ss_dssp EECCSSSCCS--------HHHHHHHHHHHHHCSSSCEECGGG
T ss_pred EECccCcCcH--------HHHHHHHHHHHHHCCCCcEEeCCC
Confidence 9999999652 134677899999999999998764
|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
Probab=99.36 E-value=9.5e-12 Score=146.28 Aligned_cols=145 Identities=17% Similarity=0.083 Sum_probs=101.9
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
+|++|+|||+||..+. +..........++.+++.||++|+|+||+.. |++
T Consensus 345 NGkpi~lrGvn~h~~~-p~~G~~~~~e~~~~dl~lmK~~g~N~vR~~h---------yp~-------------------- 394 (1023)
T 1jz7_A 345 NGKPLLIRGVNRHEHH-PLHGQVMDEQTMVQDILLMKQNNFNAVRCSH---------YPN-------------------- 394 (1023)
T ss_dssp TTEECCEEEEECCCCB-TTTBTCCCHHHHHHHHHHHHHTTCCEEECTT---------SCC--------------------
T ss_pred CCEEEEEEEeeccccC-cccccCCCHHHHHHHHHHHHHcCCCEEEecC---------CCC--------------------
Confidence 9999999999996442 1111223334467889999999999999831 110
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEE
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVV 208 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vi 208 (570)
-+++++.|.++||+||.+.-... +.|++. ....+. .-.+.+.+.++.|++|++++|.|+
T Consensus 395 --------------~~~~~dlcDe~Gi~V~~E~~~~~~g~~~~~-----~~~~~p-~~~~~~~~~~~~mV~r~rNHPSIi 454 (1023)
T 1jz7_A 395 --------------HPLWYTLCDRYGLYVVDEANIETHGMVPMN-----RLTDDP-RWLPAMSERVTRMVQRDRNHPSVI 454 (1023)
T ss_dssp --------------CHHHHHHHHHHTCEEEEECSCBCTTSSSTT-----TTTTCG-GGHHHHHHHHHHHHHHHTTCTTEE
T ss_pred --------------CHHHHHHHHHCCCEEEECCCcccCCccccC-----cCCCCH-HHHHHHHHHHHHHHHHhCCCCEEE
Confidence 13577899999999999862211 112110 001111 124667788999999999999999
Q ss_pred EEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCC
Q 008330 209 GMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLN 252 (570)
Q Consensus 209 g~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~ 252 (570)
++++.||+... ..++++++.||+.||.++|..++.+
T Consensus 455 ~WslgNE~~~~--------~~~~~l~~~ik~~DptRpv~~~~~~ 490 (1023)
T 1jz7_A 455 IWSLGNESGHG--------ANHDALYRWIKSVDPSRPVQYEGGG 490 (1023)
T ss_dssp EEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECCTTT
T ss_pred EEECccCCcch--------HHHHHHHHHHHHhCCCCeEEecCCC
Confidence 99999999642 1345778999999999999987653
|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=2.8e-11 Score=132.45 Aligned_cols=290 Identities=14% Similarity=0.147 Sum_probs=155.2
Q ss_pred ChHHHHHHHHH-HcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 76 QPMDMLSKRVV-DMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 76 ~~~~~~~~~i~-~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
.+..+.++.|+ ++|||+||+++.|.-... .+...+.. ..|.. .--+..+|+++++|.++
T Consensus 33 ~~~~e~l~~~~~~~G~~~vR~~~~w~D~~~-~~~~~~~~-----------~~g~~--------~~n~~~~D~~~~~~~~~ 92 (503)
T 1w91_A 33 KEYLDHLKLVQEKIGFRYIRGHGLLSDDVG-IYREVEID-----------GEMKP--------FYNFTYIDRIVDSYLAL 92 (503)
T ss_dssp HHHHHHHHHHHHHTCCSEEECSCTTSTTTC-CEEEEESS-----------SSEEE--------EECCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCeEEEeccCcCCCce-Eeeccccc-----------CCCce--------eeccHHHHHHHHHHHHC
Confidence 45678888887 899999999976641000 01000000 00100 01146799999999999
Q ss_pred CCEEEEecCCCCCCccccCCCCCCCCCC---CCCCHHHHHHHHHHHHHHhCCCC---cEE--EEeccCCCCCC--CC--C
Q 008330 155 NVMVILDNHISKPGWCCSNSDGNGFFGD---QYFNPDLWIKGLTKMATIFNGVR---NVV--GMSLRNELRGP--KQ--N 222 (570)
Q Consensus 155 Gl~VILD~H~~~~~w~~~~~dgng~~~d---~~~~~~~~~~~w~~iA~ryk~~p---~Vi--g~dL~NEP~~~--~~--~ 222 (570)
||.+|+.+|+. |.|..+.......|.. ...+.+.|.++.+.+++++++.- .|- -|++.|||... +. +
T Consensus 93 Gi~p~v~l~~~-P~~~~~~~~~~~~w~~~~~~p~~~~~~~~~v~~~~~~~~~ryg~~~V~~W~wev~NEp~~~~~~~~~~ 171 (503)
T 1w91_A 93 NIRPFIEFGFM-PKALASGDQTVFYWKGNVTPPKDYNKWRDLIVAVVSHFIERYGIEEVRTWLFEVWNEPNLVNFWKDAN 171 (503)
T ss_dssp TCEEEEEECSB-CGGGBSSCCEETTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHHHHHTSEEEECSCTTSTTTSGGGC
T ss_pred CCEEEEEEcCC-cHHHhCCCCceeecCCCCCCccCHHHHHHHHHHHHHHHHhhcCchhhceeeEEEeeCCCCccCCCCCC
Confidence 99999999884 5665322110111211 11356888877777775554321 253 58999999863 11 4
Q ss_pred hhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCC-Cc-----chhhhhcccCcCCCCCEEEEEeecCCCCC------CCCCC
Q 008330 223 VKDWYRYMQLGAEAVHAANPEVLVILSGLNFD-KD-----LSFVRNQAVNLTFTGKLVFEAHWYGFTDG------QAWVD 290 (570)
Q Consensus 223 ~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~-~d-----l~~~~~~p~~l~~~~nlVys~H~Y~~~~~------~~w~~ 290 (570)
.+++.+.+++++++||+++|+..|...+.... .. +..+..... .--++++|.|..... ..|..
T Consensus 172 ~~~y~~~~~~~~~~ik~~~P~~~vggp~~~~~~~~w~~~~l~~~~~~g~-----~~D~is~H~Y~~~~~~~~~~~~~~~~ 246 (503)
T 1w91_A 172 KQEYFKLYEVTARAVKSVDPHLQVGGPAICGGSDEWITDFLHFCAERRV-----PVDFVSRHAYTSKAPHKKTFEYYYQE 246 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEECSSCTHHHHHHHHHHHHTTC-----CCCEEEEEEECBCSCSEECSSCEECC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEeeeccCCchHHHHHHHHHHHhCCC-----CCCEEEEeecCCCccccccccccccc
Confidence 56677888899999999999987743322111 11 111112111 123789999985431 00111
Q ss_pred CCCcchhhHHHHHHHHHHHHHHh---cCCCeEEeccccCCCCCCc-chHHH-HHHHHHHHHHC-C-C-ceEEeccCceee
Q 008330 291 GNPNQVCGRVVDNVMRLSGFLLE---QGWPLFVSEFGADLRGNNV-NDNRY-LNCFFGVAAEL-D-W-DWALWTLVGSYY 362 (570)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~g~l~~---~g~Pv~iGEFG~~~~~~~~-~~~~~-~~~~~~~~~~~-g-i-gw~~W~~~G~y~ 362 (570)
. ..+..+.+.+......+.+ .++||+|+|||......+. .+..+ ...+++.+.+. + + +..||++...+.
T Consensus 247 ~---~~~~~~~~~i~~~~~~~~~~~~~~~pi~itE~g~~~~~~~~~~d~~~~A~~~~~~l~~~~~~v~~~~~w~~~D~~e 323 (503)
T 1w91_A 247 L---EPPEDMLEQFKTVRALIRQSPFPHLPLHITEYNTSYSPINPVHDTALNAAYIARILSEGGDYVDSFSYWTFSDVFE 323 (503)
T ss_dssp B---CCHHHHHHHHHHHHHHHHTSSSTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHHHGGGTCSEEEESCSBSCCC
T ss_pred c---CCHHHHHHHHHHHHHHHHhcCCCCCcEEEeccCCCCCCCCCcccHHHhHHHHHHHHHHHhhhhheEEEEEEecccc
Confidence 0 1233444444443333333 3799999999997643322 12222 12223333322 2 2 467888753221
Q ss_pred cccCc--cCCCceeeeecCCCCCccchhHHHHHHhccc
Q 008330 363 LREGV--IGLNEYYGLFDWNWCDIRNSSFLERISSLQS 398 (570)
Q Consensus 363 ~r~~~--~~~~et~Gll~~dw~~~~~~~~~~~~~~l~~ 398 (570)
..+. ......|||++.+.. ..|.+ ..++.+.+
T Consensus 324 -~~~~~~~~~~~~fGLl~~~~~--pKPay-~a~~~~~~ 357 (503)
T 1w91_A 324 -EMDVPKALFHGGFGLVALHSI--PKPTF-HAFTFFNA 357 (503)
T ss_dssp -TTSSCSSSSSSCCCSEEGGGE--ECHHH-HHHHHHHT
T ss_pred -ccCCCCccccCCcccCCCCCc--cChHH-HHHHHHHh
Confidence 0011 111236999987643 23443 24444444
|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
Probab=99.34 E-value=2.8e-11 Score=142.29 Aligned_cols=152 Identities=17% Similarity=0.121 Sum_probs=104.7
Q ss_pred eEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhh
Q 008330 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQK 118 (570)
Q Consensus 39 L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~ 118 (570)
+.++++.|. -+|++++|||+||..+. +..........++++++.||++|||+||+.. |++
T Consensus 314 ve~~~~~f~-lNGkpi~l~Gvn~h~~~-p~~G~~~~~e~~~~dl~lmK~~G~N~VR~~h---------yp~--------- 373 (1024)
T 1yq2_A 314 VRIVGDQFL-VNGRRVVFHGVNRHETH-PDRGRVFDEAGAREDLALMKRFNVNAIRTSH---------YPP--------- 373 (1024)
T ss_dssp EEEETTEEE-ETTEECCEEEEEECCCC-TTTTTCCCHHHHHHHHHHHHHTTCCEEEETT---------SCC---------
T ss_pred EEEeCCEEE-ECCceEEEEEEEccCCc-cccccCCCHHHHHHHHHHHHHcCCCEEEecC---------CCC---------
Confidence 344444432 39999999999986442 1111123334467899999999999999831 110
Q ss_pred ccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEec----CCCC-CCccccCCCCCCCCCCCCCCHHHHHHH
Q 008330 119 LGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDN----HISK-PGWCCSNSDGNGFFGDQYFNPDLWIKG 193 (570)
Q Consensus 119 lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~----H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~ 193 (570)
-+++++.|.++||+||.+. |... +.|. +....+. .-.+.+.+.
T Consensus 374 -------------------------~~~fydlcDe~Gi~V~~E~~~~~~g~~~~~w~------~~~~~~p-~~~~~~~~~ 421 (1024)
T 1yq2_A 374 -------------------------HPRLLDLADEMGFWVILECDLETHGFEAGGWV------ENPSDVP-AWRDALVDR 421 (1024)
T ss_dssp -------------------------CHHHHHHHHHHTCEEEEECSCBCGGGTTTTTT------TCGGGCG-GGHHHHHHH
T ss_pred -------------------------CHHHHHHHHHCCCEEEEcCCcccCCccccccc------ccCCCCH-HHHHHHHHH
Confidence 1467789999999999986 2210 1110 0000111 124667889
Q ss_pred HHHHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 194 LTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 194 w~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
++.|++|++++|.|+++++.||+... ..++++++.||+.||.++|..++
T Consensus 422 ~~~mV~r~rNHPSIi~WslgNE~~~g--------~~~~~l~~~ik~~DptRpv~~~~ 470 (1024)
T 1yq2_A 422 MERTVERDKNHPSIVMWSLGNESGTG--------SNLAAMAAWAHARDSSRPVHYEG 470 (1024)
T ss_dssp HHHHHHHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECTT
T ss_pred HHHHHHHcCCCCeEEEEECCcCcchH--------HHHHHHHHHHHHhCCCceEEeCC
Confidence 99999999999999999999999652 23567789999999999999876
|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A | Back alignment and structure |
|---|
Probab=99.30 E-value=5e-11 Score=130.42 Aligned_cols=291 Identities=13% Similarity=0.141 Sum_probs=154.3
Q ss_pred ChHHHHHHHHH-HcCCcEEEecccccc-cccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhc
Q 008330 76 QPMDMLSKRVV-DMGFNCVRLTWPLYL-ATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGN 153 (570)
Q Consensus 76 ~~~~~~~~~i~-~~GfN~VRlPi~~~~-~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~ 153 (570)
.+.++.++.|+ ++|||+||+.+.|.- +.. +...+.. ..|.. .--+..+|++|+.|.+
T Consensus 33 ~~~~e~l~~~~~~~G~~~vR~~~~w~~~~~~--~~~~~~~-----------~~g~~--------~~~~~~~D~~~~~~~~ 91 (500)
T 1uhv_A 33 KEYIETLKYVKENIDFKYIRGHGLLCDDVGI--YREDVVG-----------DEVKP--------FYNFTYIDRIFDSFLE 91 (500)
T ss_dssp HHHHHHHHHHHTTSCCCEEECSCTTSTTTCC--EEEEEET-----------TEEEE--------EECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCceEEEEecCcCCCcee--eeccccc-----------CCCce--------EEehhHHHHHHHHHHH
Confidence 35678899998 999999999976641 000 0000000 00100 0114679999999999
Q ss_pred CCCEEEEecCCCCCCccccCCCCC----CCCCCCCCCHHHHHHHHHHHHHHhCCC-C--cEE--EEeccCCCCCC--CC-
Q 008330 154 NNVMVILDNHISKPGWCCSNSDGN----GFFGDQYFNPDLWIKGLTKMATIFNGV-R--NVV--GMSLRNELRGP--KQ- 221 (570)
Q Consensus 154 ~Gl~VILD~H~~~~~w~~~~~dgn----g~~~d~~~~~~~~~~~w~~iA~ryk~~-p--~Vi--g~dL~NEP~~~--~~- 221 (570)
+||.+++.+|+. |.|........ +.+... .+.+.|.++.+++++++++. . .|- -+++.|||... +.
T Consensus 92 ~Gi~p~v~l~~~-P~~~~~~~~~~~~~~~~~~~p-~~~~~w~~~~~~~~~~~~~ryg~~~V~~W~~~~~NEpn~~~~~~~ 169 (500)
T 1uhv_A 92 IGIRPFVEIGFM-PKKLASGTQTVFYWEGNVTPP-KDYEKWSDLVKAVLHHFISRYGIEEVLKWPFEIWNEPNLKEFWKD 169 (500)
T ss_dssp HTCEECEEECCC-CTTTBSSCCEETTTTEECSCB-SCHHHHHHHHHHHHHHHHHHHCHHHHTTCCEEESSCTTSTTTSGG
T ss_pred CCCEEEEEEccC-hHHHhCCCCceeecCCCCCCC-cCHHHHHHHHHHHHHHHHHhcCccceeeeeEEEeeCCCCcccCCC
Confidence 999999999884 56653221100 112222 34688888888877766542 1 243 47999999863 11
Q ss_pred -ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCC-CC-----cchhhhhcccCcCCCCCEEEEEeecCCCCCC--CCCCCC
Q 008330 222 -NVKDWYRYMQLGAEAVHAANPEVLVILSGLNF-DK-----DLSFVRNQAVNLTFTGKLVFEAHWYGFTDGQ--AWVDGN 292 (570)
Q Consensus 222 -~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w-~~-----dl~~~~~~p~~l~~~~nlVys~H~Y~~~~~~--~w~~~~ 292 (570)
+.+++.+.+.+++++||+++|+..|...+... .. -+..+..... . --++++|.|+..... +-....
T Consensus 170 ~~~~~y~~~~~~~~~~ik~~~P~~~vggp~~~~~~~~w~~~~l~~~~~~~~--~---~D~is~H~Y~~~~~~~~~~~~~~ 244 (500)
T 1uhv_A 170 ADEKEYFKLYKVTAKAIKEVNENLKVGGPAICGGADYWIEDFLNFCYEENV--P---VDFVSRHAYTSKQGEYTPHLIYQ 244 (500)
T ss_dssp GCHHHHHHHHHHHHHHHHHHCTTSCEEEEEECTTCTHHHHHHHHHHHHHTC--C---CSEEEEEEECBCCCCCCSSCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCEEECcccCCCchHHHHHHHHHHHhCCC--C---CcEEEEeecCCCccccccccccc
Confidence 45667777899999999999997764332211 11 1111111111 1 227899999854320 000000
Q ss_pred CcchhhHHHHHHHHHHHHHHh---cCCCeEEeccccCCCCCCc-chHHHHH-HHHHHHHHC-C--CceEEeccCceeecc
Q 008330 293 PNQVCGRVVDNVMRLSGFLLE---QGWPLFVSEFGADLRGNNV-NDNRYLN-CFFGVAAEL-D--WDWALWTLVGSYYLR 364 (570)
Q Consensus 293 ~~~~~~~~~~~~~~~~g~l~~---~g~Pv~iGEFG~~~~~~~~-~~~~~~~-~~~~~~~~~-g--igw~~W~~~G~y~~r 364 (570)
.......+.+.+......+.+ .+.||+|+|||......+. .+..+.. .+++.+.+. + -+..+|.+...|- .
T Consensus 245 ~~~~~~~~~~~i~~~~~~l~~~~~~~~pi~iTE~g~~~~~~~~~~d~~~~a~~l~~~l~~~~~~v~~~~~W~l~D~~e-~ 323 (500)
T 1uhv_A 245 EIMPSEYMLNEFKTVREIIKNSHFPNLPFHITEYNTSYSPQNPVHDTPFNAAYIARILSEGGDYVDSFSYWTFSDVFE-E 323 (500)
T ss_dssp CBCCHHHHHHHHHHHHHHHHTSSCTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHHHGGGTCSEEEESCSBSCCC-T
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCCCCcEEEecCcccCCCCCCcCcHHHHHHHHHHHHHHHHhhhhheeeeEEechhh-c
Confidence 001122333333332232332 4799999999997643221 1222211 122222222 1 2477898743221 0
Q ss_pred cCcc--CCCceeeeecCCCCCccchhHHHHHHhccc
Q 008330 365 EGVI--GLNEYYGLFDWNWCDIRNSSFLERISSLQS 398 (570)
Q Consensus 365 ~~~~--~~~et~Gll~~dw~~~~~~~~~~~~~~l~~ 398 (570)
.+.+ .....|||++.|.. ++ |.+ ..++.+.+
T Consensus 324 ~~~~~~~~~~~fGL~~~d~~-pK-Pay-~a~~~l~~ 356 (500)
T 1uhv_A 324 RDVPRSQFHGGFGLVALNMI-PK-PTF-YTFKFFNA 356 (500)
T ss_dssp TSSCCSSCSCCSCSEETTTE-EC-HHH-HHHHHHTT
T ss_pred cCCCCccccCCcccCCCCCC-cC-cHH-HHHHHHHH
Confidence 0101 11236899988743 33 433 34455543
|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.2e-10 Score=136.75 Aligned_cols=222 Identities=14% Similarity=0.084 Sum_probs=134.7
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
+|++|+|||||+..+. +..........+..+++.||++|||+||..- |++
T Consensus 350 NGkpi~lkGvn~H~~~-p~~G~a~~~e~~~~Di~lmK~~g~NaVRtsH---------yp~-------------------- 399 (1032)
T 3oba_A 350 NGKDILFRGVNRHDHH-PRFGRAVPLDFVVRDLILMKKFNINAVRNSH---------YPN-------------------- 399 (1032)
T ss_dssp TTEECCEEEEECCCCB-TTTBTCCCHHHHHHHHHHHHHTTCCEEECTT---------SCC--------------------
T ss_pred CCeEEEEeccCcCccC-cccCcCCCHHHHHHHHHHHHHcCCcEEEecC---------CCC--------------------
Confidence 9999999999986543 1111122334467889999999999999831 110
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEec----CCCCCCccc-c---CCC-----------CCCCCCCCCCCHHHH
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDN----HISKPGWCC-S---NSD-----------GNGFFGDQYFNPDLW 190 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~----H~~~~~w~~-~---~~d-----------gng~~~d~~~~~~~~ 190 (570)
. ++..+.|.++||+||-+. |... .|.. . ..+ ...+..+...-.+.+
T Consensus 400 --~------------~~fydlCDe~Gi~V~dE~~~e~hG~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~ 464 (1032)
T 3oba_A 400 --H------------PKVYDLFDKLGFWVIDEADLETHGVQ-EPFNRHTNLEAEYPDTKNKLYDVNAHYLSDNPEYEVAY 464 (1032)
T ss_dssp --C------------TTHHHHHHHHTCEEEEECSCBCGGGG-HHHHHHTTCCCCCTTTTHHHHTTTGGGTTTCGGGHHHH
T ss_pred --h------------HHHHHHHHHCCCEEEEccccccCCcc-ccccccccccccccccccccccccccccCCCHHHHHHH
Confidence 0 235678999999999886 4210 0100 0 000 000111111114667
Q ss_pred HHHHHHHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCC
Q 008330 191 IKGLTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFT 270 (570)
Q Consensus 191 ~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~ 270 (570)
.+..+.|++|++++|.|+++.+.||+... ..++++++.+|+.||.++|..++.... .
T Consensus 465 ~~~~~~mV~RdrNHPSIi~WslgNE~~~g--------~~~~~~~~~~k~~DptRpv~~e~~~~~---------------~ 521 (1032)
T 3oba_A 465 LDRASQLVLRDVNHPSIIIWSLGNEACYG--------RNHKAMYKLIKQLDPTRLVHYEGDLNA---------------L 521 (1032)
T ss_dssp HHHHHHHHHHHTTCTTEEEEECCBSCCCC--------HHHHHHHHHHHHHCTTSEEECTTCTTC---------------T
T ss_pred HHHHHHHHHHhcCCCeEEEEECccCCccc--------hhHHHHHHHHHHhCCCCcEEeccCcCc---------------c
Confidence 78899999999999999999999998643 134677899999999999998864311 0
Q ss_pred CCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCC-
Q 008330 271 GKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELD- 349 (570)
Q Consensus 271 ~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~g- 349 (570)
.--|++. +|+. .+.+.+.+............|+++.|||-.|.... .. ++.+.+.++++.
T Consensus 522 ~~Di~s~-mY~~--------------~~~i~~~~~~~~~~~~~~~kP~i~~Ey~Hamgn~~-g~---l~~yw~~~~~~p~ 582 (1032)
T 3oba_A 522 SADIFSF-MYPT--------------FEIMERWRKNHTDENGKFEKPLILCEYGHAMGNGP-GS---LKEYQELFYKEKF 582 (1032)
T ss_dssp TCSSEEE-ESCC--------------HHHHHHHHHHHBCTTSCBSSCEEEEEESCCCSSCC-CC---HHHHHHHHHHCTT
T ss_pred cceeeec-cCCC--------------HHHHHHHHhhCcccccccCCCEEEEeccccccCCC-CC---HHHHHHHHHhCCC
Confidence 1124565 5642 12222222110000001268999999998875322 11 344455666654
Q ss_pred -CceEEeccC
Q 008330 350 -WDWALWTLV 358 (570)
Q Consensus 350 -igw~~W~~~ 358 (570)
.|-+.|.|-
T Consensus 583 ~~GgfiWdw~ 592 (1032)
T 3oba_A 583 YQGGFIWEWA 592 (1032)
T ss_dssp EEEEEESCSB
T ss_pred eeEEEEEecc
Confidence 477788765
|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=2.5e-11 Score=140.96 Aligned_cols=149 Identities=13% Similarity=0.131 Sum_probs=99.6
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
+|++++|||+||.... .+... .....++.+++.||++|+|+||+ +.-.. |
T Consensus 328 NG~~v~l~G~n~~~~~-~~~~~-~~~~~~~~~l~~~k~~g~N~iR~-wgg~~-----y---------------------- 377 (848)
T 2je8_A 328 NGIPMFAKGANYIPQD-ALLPN-VTTERYQTLFRDMKEANMNMVRI-WGGGT-----Y---------------------- 377 (848)
T ss_dssp TTEEECEEEEEECCSC-SSGGG-CCHHHHHHHHHHHHHTTCCEEEE-CTTSC-----C----------------------
T ss_pred CCEEeEEEeEeecCch-hcccC-CCHHHHHHHHHHHHHcCCcEEEe-CCCcc-----C----------------------
Confidence 8999999999985321 11111 22234677899999999999999 21000 0
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEE
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVG 209 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig 209 (570)
| . +++++.|.++||+|+.|++.. |.. +..+..+ .+.+.+.++.+++|++++|.|++
T Consensus 378 ---~---~-------~~~~d~cD~~GilV~~e~~~~-----~~~-----~~~~~~~-~~~~~~~~~~~v~r~~nHPSii~ 433 (848)
T 2je8_A 378 ---E---N-------NLFYDLADENGILVWQDFMFA-----CTP-----YPSDPTF-LKRVEAEAVYNIRRLRNHASLAM 433 (848)
T ss_dssp ---C---C-------HHHHHHHHHHTCEEEEECSCB-----SSC-----CCCCHHH-HHHHHHHHHHHHHHHTTCTTEEE
T ss_pred ---C---C-------HHHHHHHHHcCCEEEECcccc-----cCC-----CCCCHHH-HHHHHHHHHHHHHHhcCCCcEEE
Confidence 0 0 357899999999999998632 110 0011111 35567788999999999999999
Q ss_pred EeccCCCCCC---CC-----C---h-hHHHH----HHHHHHHHHHhcCCCcEEEEeCCC
Q 008330 210 MSLRNELRGP---KQ-----N---V-KDWYR----YMQLGAEAVHAANPEVLVILSGLN 252 (570)
Q Consensus 210 ~dL~NEP~~~---~~-----~---~-~~W~~----~~~~~~~aIr~~dp~~lIiVeG~~ 252 (570)
+.+.|||... +. + . ..+.. +.+.+.+.||+.||.+++..+...
T Consensus 434 W~~~NE~~~~~~~w~~~~~~~~~~~~~~~~~y~~~~~~~l~~~vk~~Dptr~v~~~S~~ 492 (848)
T 2je8_A 434 WCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRFYVHSSPY 492 (848)
T ss_dssp EESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTSEEESSBSS
T ss_pred EEccCCCcccccccccccccCccchhhhHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC
Confidence 9999999531 00 0 0 11222 345688899999999998876543
|
| >1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A | Back alignment and structure |
|---|
Probab=99.19 E-value=3.3e-10 Score=121.37 Aligned_cols=135 Identities=13% Similarity=0.015 Sum_probs=98.1
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|++++|..+.++. ..-.++..++.++++|+++.++||.
T Consensus 59 ~~eDi~lm~~~G~~~~R~si~W~Ri~P~g--------------------------~g~~n~~gl~~y~~~id~l~~~GI~ 112 (431)
T 1ug6_A 59 YEEDIALMQSLGVRAYRFSVAWPRILPEG--------------------------RGRINPKGLAFYDRLVDRLLASGIT 112 (431)
T ss_dssp HHHHHHHHHHHTCCEEEEECCHHHHSTTS--------------------------SSCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHcCCCEEEcccCHHHcccCC--------------------------CCCcCHHHHHHHHHHHHHHHHcCCE
Confidence 68899999999999999999997665420 0123567899999999999999999
Q ss_pred EEEecCCC-CCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCC------------C-CCh
Q 008330 158 VILDNHIS-KPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP------------K-QNV 223 (570)
Q Consensus 158 VILD~H~~-~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~------------~-~~~ 223 (570)
+||++|+. .|.|.... .+ |.++ ...+.|.++++.+++||++. |..+.++|||... . ...
T Consensus 113 p~vtL~H~d~P~~l~~~---gg-w~~~-~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 185 (431)
T 1ug6_A 113 PFLTLYHWDLPLALEER---GG-WRSR-ETAFAFAEYAEAVARALADR--VPFFATLNEPWCSAFLGHWTGEHAPGLRNL 185 (431)
T ss_dssp EEEEEESSCCBHHHHTT---TG-GGSH-HHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCH
T ss_pred EEEEeCCCCCCcchhhc---CC-CCCh-HHHHHHHHHHHHHHHHhcCC--CceEEEecCcchhhccccccccCCCCccch
Confidence 99999764 35553221 23 3333 24688999999999999996 6679999999641 1 111
Q ss_pred hHH-------HHHHHHHHHHHHhcCCCcEE
Q 008330 224 KDW-------YRYMQLGAEAVHAANPEVLV 246 (570)
Q Consensus 224 ~~W-------~~~~~~~~~aIr~~dp~~lI 246 (570)
..- .....++++++|+ +|+.-|
T Consensus 186 ~~~~~a~h~~llAha~Av~~~r~-~~~~~i 214 (431)
T 1ug6_A 186 EAALRAAHHLLLGHGLAVEALRA-AGARRV 214 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-TTCSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cCCCeE
Confidence 111 1223578899999 887543
|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.6e-10 Score=124.30 Aligned_cols=248 Identities=13% Similarity=0.140 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCC--CCCCHHHHHHHHHHH----HHHhCCC-CcEEEEecc
Q 008330 141 IKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGD--QYFNPDLWIKGLTKM----ATIFNGV-RNVVGMSLR 213 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d--~~~~~~~~~~~w~~i----A~ryk~~-p~Vig~dL~ 213 (570)
|..+|++|+.+.++||.+++.+... |.|..+......+|.+ ...+.+.|.++.+++ ++||+.. -.+..||+.
T Consensus 83 ~~~~D~~~d~~~~~G~~p~~~l~~~-P~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~RYg~~~v~~w~~Evw 161 (500)
T 4ekj_A 83 WTKIDQLYDALLAKGIKPFIELGFT-PEAMKTSDQTIFYWKGNTSHPKLGPWRDLIDAFVHHLRARYGVEEVRTWFFEVW 161 (500)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCB-CGGGCSSCCEETTTTEECSCCCHHHHHHHHHHHHHHHHHHHCHHHHHTSEEEES
T ss_pred hHHHHHHHHHHHHCCCEEEEEEeCC-chhhcCCCCccccccCCCCcccHHHHHHHHHHHHHHHHHhhCccccceeEEEEE
Confidence 5679999999999999999998765 4564332211112211 123467776655554 5555432 234469999
Q ss_pred CCCCCCC----CChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCc----chhhhhcccCcCCCCCEEEEEeecCCCCC
Q 008330 214 NELRGPK----QNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKD----LSFVRNQAVNLTFTGKLVFEAHWYGFTDG 285 (570)
Q Consensus 214 NEP~~~~----~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~d----l~~~~~~p~~l~~~~nlVys~H~Y~~~~~ 285 (570)
|||.... .+.+++.+++++++++||+++|+..|.-.+...... +..+..... . --++++|.|+....
T Consensus 162 NEp~~~~~~~~~~~~~y~~l~~~~~~aik~~~P~~~Vgg~~~~~~~~~~~fl~~~~~~~~--~---~D~is~H~Y~~~~~ 236 (500)
T 4ekj_A 162 NEPNLDGFWEKADQAAYFELYDVTARAIKAIDPSLRVGGPATAGAAWVPEFLAHVKKSGS--A---VDFVTTHTYGVDGG 236 (500)
T ss_dssp SCTTSTTTSGGGCHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGCSHHHHHHHHHHTTC--C---CSEEEEEEESEEEE
T ss_pred ECCCCccCCCCCCHHHHHHHHHHHHHHHHhhCCccccccCccCCccccHHHHHHHHhcCC--c---cceEEeeccCCCCC
Confidence 9997642 256788899999999999999999886655432221 112222211 1 22789999973211
Q ss_pred --CCCCCCC--CcchhhHHHHHHHHHHHHHHh---cCCCeEEeccccCCCCCCc-----chHHHHHHHHHHHHHCCCceE
Q 008330 286 --QAWVDGN--PNQVCGRVVDNVMRLSGFLLE---QGWPLFVSEFGADLRGNNV-----NDNRYLNCFFGVAAELDWDWA 353 (570)
Q Consensus 286 --~~w~~~~--~~~~~~~~~~~~~~~~g~l~~---~g~Pv~iGEFG~~~~~~~~-----~~~~~~~~~~~~~~~~gigw~ 353 (570)
....... .......+.+.+......+.+ .+.|++++|||........ ....|+-..+..+.....+-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~~~~~~pi~itE~g~~~~~~~~~~~~~~~Aa~i~~~~~~~~~~~~~~~ 316 (500)
T 4ekj_A 237 FLDEKGVQDTKLSPSPDAVVGDVRRVREQIEASAFPGLPLYFTEWSTSYTPRDSVHDSYVSAAYIVEKLRRVKGLVQAMS 316 (500)
T ss_dssp EECTTSCEEEEECCSTTTTHHHHHHHHHHHHTTTSTTCCEEEEEEESCSCTTCTTTTSTHHHHHHHHHHHHHTTTCSEEE
T ss_pred CcccccccccccccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCccccHHHHHHHHHHHHHHhhhhCceee
Confidence 0000000 000112223333332333333 4689999999987653321 122332222221222223456
Q ss_pred EeccCceeecccCcc--CCCceeeeecCCCCCccchhHHHHHHhccc
Q 008330 354 LWTLVGSYYLREGVI--GLNEYYGLFDWNWCDIRNSSFLERISSLQS 398 (570)
Q Consensus 354 ~W~~~G~y~~r~~~~--~~~et~Gll~~dw~~~~~~~~~~~~~~l~~ 398 (570)
+|.+...+. ..+.+ .....|||++.++.. -|.+ ..++.+.+
T Consensus 317 ~w~~~d~~~-~~~~~~~~~~~~fGll~~~~~p--KPay-~a~~~l~~ 359 (500)
T 4ekj_A 317 YWTYSDLFE-EPGPPTAPFQGGFGLMNPQGIR--KPSW-FAYKYLNA 359 (500)
T ss_dssp ESCSBSCCC-TTSSCCSSCSSCSCSBCTTSCB--CHHH-HHHHHHTT
T ss_pred EEEEEeeec-ccCCCcccccCCCCccccCCCc--CcHH-HHHHHHHH
Confidence 787642210 11111 224569999988642 2433 34444444
|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.2e-10 Score=129.63 Aligned_cols=171 Identities=13% Similarity=0.081 Sum_probs=116.8
Q ss_pred CCCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhh
Q 008330 36 GLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQS 115 (570)
Q Consensus 36 ~~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s 115 (570)
...++.+++.|. -+|+|++++|++...+. ++ ....+++++.||++|+|+||+.+.|..+++
T Consensus 5 ~r~v~~~~~~f~-lnGkp~~i~gg~~Hy~r---~~----~e~w~~dl~~mK~~G~N~Vrt~v~W~~hEP----------- 65 (612)
T 3d3a_A 5 EGTFEVGKNTFL-LNGEPFVVKAAEIHYPR---IP----KEYWEHRIKMCKALGMNTICLYVFWNFHEP----------- 65 (612)
T ss_dssp CCCEEECSSSEE-ETTEEECCEEEEECGGG---SC----GGGHHHHHHHHHHHTCCEEEEECCHHHHCS-----------
T ss_pred cceEEEeCCEEE-ECCEEEEEEEEEecCcc---CC----HHHHHHHHHHHHHcCCCEEEEcChHHhcCC-----------
Confidence 345777766443 48999999999975432 12 244789999999999999999998865543
Q ss_pred hhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCC---------CCCCccccCCCCCCCCCCCCCC
Q 008330 116 FQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHI---------SKPGWCCSNSDGNGFFGDQYFN 186 (570)
Q Consensus 116 ~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~---------~~~~w~~~~~dgng~~~d~~~~ 186 (570)
+|..++.+.++.++++++.|.++||+|||..+- ..|.|..... .....+ .+
T Consensus 66 ----------------~~G~ydf~gl~~l~~fl~la~e~GL~VIl~~gpyi~~ew~~gG~P~Wl~~~~--~~~~r~--~d 125 (612)
T 3d3a_A 66 ----------------EEGRYDFAGQKDIAAFCRLAQENGMYVIVRPGPYVCAEWEMGGLPWWLLKKK--DIKLRE--QD 125 (612)
T ss_dssp ----------------STTCCCCSGGGCHHHHHHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGST--TCCSSS--CC
T ss_pred ----------------CCCccChhHHHHHHHHHHHHHHCCCEEEEecCcccccccccCCCchhhccCC--CceecC--CC
Confidence 233345567888999999999999999998641 1122321110 001111 12
Q ss_pred ---HHHHHHHHHHHHHHhCC-----CCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcC-CCcEEEEe
Q 008330 187 ---PDLWIKGLTKMATIFNG-----VRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAAN-PEVLVILS 249 (570)
Q Consensus 187 ---~~~~~~~w~~iA~ryk~-----~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~d-p~~lIiVe 249 (570)
.+.+.++++.|++||++ ++.|++++|-||+...... ..+++.+.+.+|+.+ ++...+-.
T Consensus 126 p~y~~~~~~~~~~l~~r~~~~~~~n~p~II~wqIeNEyg~yg~~----~~y~~~l~~~l~~~g~~~vp~~~~ 193 (612)
T 3d3a_A 126 PYYMERVKLFLNEVGKQLADLQISKGGNIIMVQVENEYGAFGID----KPYISEIRDMVKQAGFTGVPLFQC 193 (612)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGGTCCC----HHHHHHHHHHHHHHTCCSSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCEEEEeecccccccCch----HHHHHHHHHHHHHcCCCchhheec
Confidence 35667888999999995 8999999999999542211 245566778888887 46655554
|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.15 E-value=8.6e-10 Score=126.83 Aligned_cols=147 Identities=20% Similarity=0.290 Sum_probs=101.3
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
+|++++|||+||.-.. +..........++.+++.||++|+|+||+.- +
T Consensus 282 NGk~i~lkGvn~h~d~-~~~G~a~~~~~~~~dl~~~K~~G~N~iR~~h-~------------------------------ 329 (801)
T 3gm8_A 282 NGKSLKIKGVCDHHTV-GAVGAAVPDDLLHYRLKLLKDMGCNAIRTSH-N------------------------------ 329 (801)
T ss_dssp TTEECCEEEEEECSCC-GGGTTCCCHHHHHHHHHHHHHTTCCEEEETT-S------------------------------
T ss_pred CCEEeEEEccCcCCCC-cccCccCCHHHHHHHHHHHHHCCCcEEEecC-C------------------------------
Confidence 8999999999985322 1111222334467889999999999999831 1
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEE
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVG 209 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig 209 (570)
|. -+++++.|.++||+||.++- ..|.... ...+ +. . .-.+...+..+.|..|++++|.|++
T Consensus 330 ---p~---------~~~~~dlcDe~GilV~~E~~---~~w~~~~-~~~~-~~-~-~~~~~~~~~~~~mv~r~rNHPSIi~ 390 (801)
T 3gm8_A 330 ---PF---------SPAFYNLCDTMGIMVLNEGL---DGWNQPK-AADD-YG-N-YFDEWWQKDMTDFIKRDRNHPSIIM 390 (801)
T ss_dssp ---CC---------CHHHHHHHHHHTCEEEEECC---SSSSSCS-STTS-GG-G-THHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred ---CC---------cHHHHHHHHHCCCEEEECCc---hhhcCCC-Cccc-cc-H-HHHHHHHHHHHHHHHhcCCCCeEEE
Confidence 00 15688999999999999863 2332111 0000 11 1 1133345678899999999999999
Q ss_pred EeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCC
Q 008330 210 MSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNF 253 (570)
Q Consensus 210 ~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w 253 (570)
+.+.||+.+. . ..+++++.+.+|+.||.++|..+...+
T Consensus 391 Ws~gNE~~g~--~----~~~~~~l~~~~k~~DptRpvt~~~~~~ 428 (801)
T 3gm8_A 391 WSIGNEVTGA--T----PEIQHNLVSLFHQLDPDRPVTQGGTDP 428 (801)
T ss_dssp EEEEESCSSC--C----HHHHHHHHHHHHHHCTTSCEEEETCCC
T ss_pred EECccCCCCc--H----HHHHHHHHHHHHHHCCCCCEEEccccc
Confidence 9999999542 1 356678889999999999999766443
|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.15 E-value=2.8e-10 Score=118.99 Aligned_cols=248 Identities=14% Similarity=0.230 Sum_probs=151.6
Q ss_pred HHHHHHHHcCCcEEEe--cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 80 MLSKRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 80 ~~~~~i~~~GfN~VRl--Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
+....|.+.+||.|++ .+.|..+++. |...+ +..+|++|+.|.++||.
T Consensus 53 ~~~~~~~~~~fn~vt~en~~kW~~~ep~---------------------------~g~~~---f~~~D~~v~~a~~~gi~ 102 (347)
T 1xyz_A 53 PTYNSILQREFSMVVCENEMKFDALQPR---------------------------QNVFD---FSKGDQLLAFAERNGMQ 102 (347)
T ss_dssp HHHHHHHHHHCSEEEESSTTSHHHHCSB---------------------------TTBCC---CHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhcCCEEEECCcccHHHhcCC---------------------------CCcCC---hHHHHHHHHHHHHCCCE
Confidence 4566777889999999 7877655431 11111 46789999999999999
Q ss_pred EE---EecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCC---ChhHHH----
Q 008330 158 VI---LDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQ---NVKDWY---- 227 (570)
Q Consensus 158 VI---LD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~---~~~~W~---- 227 (570)
|+ +-.|...|.|.... . +... ...+.+.++.+.|++|||++ |.++|+.|||....+ ....|+
T Consensus 103 v~ghtlvW~~q~P~W~~~~----~-~~~~-~~~~~~~~~i~~v~~ry~g~--v~~WdV~NE~~~~~g~~~r~s~~~~~~G 174 (347)
T 1xyz_A 103 MRGHTLIWHNQNPSWLTNG----N-WNRD-SLLAVMKNHITTVMTHYKGK--IVEWDVANECMDDSGNGLRSSIWRNVIG 174 (347)
T ss_dssp EEEEEEECSSSCCHHHHTS----C-CCHH-HHHHHHHHHHHHHHHHTTTT--CSEEEEEESCBCTTSSSBCCCHHHHHHC
T ss_pred EEEEeeeccccCcHHHhcC----C-CCHH-HHHHHHHHHHHHHHHHhCCe--eEEEEeecccccCCCcccccChHHHhcC
Confidence 97 44577667774321 0 1100 11456778888999999997 889999999975321 113454
Q ss_pred -HHHHHHHHHHHhcCCCcEEEEeCCCCCC-c------chh---hhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcch
Q 008330 228 -RYMQLGAEAVHAANPEVLVILSGLNFDK-D------LSF---VRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQV 296 (570)
Q Consensus 228 -~~~~~~~~aIr~~dp~~lIiVeG~~w~~-d------l~~---~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~ 296 (570)
.|+..+.+++|++||+..+++...+-.. . +.. +....+ ++ +-+=+..|+..... .
T Consensus 175 ~~~i~~af~~Ar~~dP~a~L~~Ndyn~~~~~~k~~~~~~~v~~l~~~G~--~i-dgiG~Q~H~~~~~~-----------~ 240 (347)
T 1xyz_A 175 QDYLDYAFRYAREADPDALLFYNDYNIEDLGPKSNAVFNMIKSMKERGV--PI-DGVGFQCHFINGMS-----------P 240 (347)
T ss_dssp TTHHHHHHHHHHHHCTTSEEEEEESSCSSSSHHHHHHHHHHHHHHHTTC--CC-CEEEECCEEESSCC-----------H
T ss_pred HHHHHHHHHHHHhhCCCCEEEeccCccccccchHHHHHHHHHHHHHCCC--Cc-ceEEEeeecCCCCC-----------c
Confidence 4778999999999999999987643211 0 011 111111 11 23334446653110 1
Q ss_pred h--hHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC------cchHHHHHHHHHHHHHCC--CceEEeccCceeecccC
Q 008330 297 C--GRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN------VNDNRYLNCFFGVAAELD--WDWALWTLVGSYYLREG 366 (570)
Q Consensus 297 ~--~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~------~~~~~~~~~~~~~~~~~g--igw~~W~~~G~y~~r~~ 366 (570)
. +.+.+.+++ +.+.|+||+|+|+++....+. .....+++.++..+.++. .|-++|.+...|-.+.+
T Consensus 241 ~~~~~~~~~l~~----~a~~G~pi~iTEldi~~~~~~~~~~~~~~Qa~~y~~~~~~~~~~~~v~git~Wg~~D~~sW~~~ 316 (347)
T 1xyz_A 241 EYLASIDQNIKR----YAEIGVIVSFTEIDIRIPQSENPATAFQVQANNYKELMKICLANPNCNTFVMWGFTDKYTWIPG 316 (347)
T ss_dssp HHHHHHHHHHHH----HHHTTCEEEEEEEEEEEETTSCHHHHHHHHHHHHHHHHHHHHHCTTEEEEEESCSBTTSCSHHH
T ss_pred hhHHHHHHHHHH----HHhcCCceEEEeccccCCCCCCchhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCccCCccccC
Confidence 1 344444443 334799999999999753221 124577788888877764 57789987644322211
Q ss_pred c-cCCCceeeeecCCCCCc
Q 008330 367 V-IGLNEYYGLFDWNWCDI 384 (570)
Q Consensus 367 ~-~~~~et~Gll~~dw~~~ 384 (570)
. ++ ....+|++.|+...
T Consensus 317 ~~~~-~~~~llfd~d~~pK 334 (347)
T 1xyz_A 317 TFPG-YGNPLIYDSNYNPK 334 (347)
T ss_dssp HSTT-EECCSSBCTTSCBC
T ss_pred cCCC-CCCceeECCCCCCC
Confidence 1 11 12345778776543
|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.14 E-value=3.9e-10 Score=115.64 Aligned_cols=238 Identities=13% Similarity=0.198 Sum_probs=146.3
Q ss_pred HHHHHHHHcCCcEEEe--cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 80 MLSKRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 80 ~~~~~i~~~GfN~VRl--Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
+....+.+.+||.|++ .+.|..+++. |...+ ++.+|++|+.|.++||.
T Consensus 27 ~~~~~~~~~~fn~~t~en~~kW~~~ep~---------------------------~g~~~---~~~~D~~v~~a~~~gi~ 76 (302)
T 1nq6_A 27 AAYASTLDAQFGSVTPENEMKWDAVESS---------------------------RNSFS---FSAADRIVSHAQSKGMK 76 (302)
T ss_dssp HHHHHHHHHHCSEEEESSTTSHHHHCSB---------------------------TTBCC---CHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHhcCCeEEEcCceeeccccCC---------------------------CCcCC---cHHHHHHHHHHHHCCCE
Confidence 4566677789999999 6777655441 11112 46689999999999999
Q ss_pred EEEe---cCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCC--C--ChhHHH---
Q 008330 158 VILD---NHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPK--Q--NVKDWY--- 227 (570)
Q Consensus 158 VILD---~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~--~--~~~~W~--- 227 (570)
|+.. .|...|.|..+ +... ...+.+.++.+.|++||++ .|.++|+.|||.... + ....|+
T Consensus 77 v~gh~lvW~~~~P~W~~~-------~~~~-~~~~~~~~~i~~v~~ry~g--~v~~WdV~NE~~~~~~~g~~r~s~~~~~~ 146 (302)
T 1nq6_A 77 VRGHTLVWHSQLPGWVSP-------LAAT-DLRSAMNNHITQVMTHYKG--KIHSWDVVNEAFQDGGSGARRSSPFQDKL 146 (302)
T ss_dssp EEEEEEEESTTCCTTTTT-------SCHH-HHHHHHHHHHHHHHHHTTT--SCSEEEEEECCBCSSSCCCBCCCHHHHHH
T ss_pred EEEEecccCCCCChhhhc-------CCHH-HHHHHHHHHHHHHHHHcCC--ceEEEEeecCccccCCCCccccCHHHHhc
Confidence 9743 37767777421 1111 1245677888899999998 488999999996542 1 012354
Q ss_pred --HHHHHHHHHHHhcCCCcEEEEeCCCC-CCc--c----hhhh---hcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcc
Q 008330 228 --RYMQLGAEAVHAANPEVLVILSGLNF-DKD--L----SFVR---NQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQ 295 (570)
Q Consensus 228 --~~~~~~~~aIr~~dp~~lIiVeG~~w-~~d--l----~~~~---~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~ 295 (570)
.++.++.+++|+++|+..+++...+- ... . ..+. ...+ +. +-+-+..|.+....
T Consensus 147 g~~~~~~af~~Ar~~dP~a~L~~Ndy~~~~~~~k~~~~~~~v~~l~~~G~--~i-DgIG~q~H~~~~~~----------- 212 (302)
T 1nq6_A 147 GNGFIEEAFRTARTVDADAKLCYNDYNTDGQNAKSNAVYEMVKDFKQRGV--PI-DCVGFQSHFNSNSP----------- 212 (302)
T ss_dssp CTTHHHHHHHHHHHHCTTSEEEEEESSCSSSSHHHHHHHHHHHHHHHHTC--CC-CEEEECCEEBTTBC-----------
T ss_pred CHHHHHHHHHHHHHhCCCCEEEecccccccCchHHHHHHHHHHHHHHCCC--Cc-ceEEEEEeecCCCC-----------
Confidence 36688999999999998888864321 101 0 0111 0111 11 33434448763211
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCC--CceEEeccCceeecccCccCCCce
Q 008330 296 VCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELD--WDWALWTLVGSYYLREGVIGLNEY 373 (570)
Q Consensus 296 ~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~g--igw~~W~~~G~y~~r~~~~~~~et 373 (570)
.++.+.+.+++ +.+.|.||+|+|+|+... +.....+++.++..+.+.. .|.++|.+...|-.+.+ +.
T Consensus 213 ~~~~~~~~l~~----~a~~g~pi~iTE~di~~~--~~~qa~~~~~~~~~~~~~~~v~git~Wg~~D~~sW~~~-----~~ 281 (302)
T 1nq6_A 213 VPSDFQANLQR----FADLGVDVQITELDIEGS--GSAQAANYTKVVNACLAVTRCTGITVWGVTDKYSWRSG-----GT 281 (302)
T ss_dssp CCTTHHHHHHH----HHTTTCEEEEEEEEECCC--HHHHHHHHHHHHHHHHTSTTEEEEEESCSCGGGCTTGG-----GC
T ss_pred CHHHHHHHHHH----HHhcCCcEEEeeCCCCCc--hHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCCcCCC-----CC
Confidence 11234444443 235789999999999853 2235677788888777653 57889998644433321 22
Q ss_pred eeeecCCCC
Q 008330 374 YGLFDWNWC 382 (570)
Q Consensus 374 ~Gll~~dw~ 382 (570)
-+|++.|+.
T Consensus 282 ~ll~d~~~~ 290 (302)
T 1nq6_A 282 PLLFDGDYN 290 (302)
T ss_dssp CSSBCTTSC
T ss_pred CccCCCCCC
Confidence 345677764
|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.6e-09 Score=111.36 Aligned_cols=247 Identities=13% Similarity=0.157 Sum_probs=138.8
Q ss_pred EEEEEeeCCCCCCccccCCC-CCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCC
Q 008330 54 VKLACVNWVSHLEPVVAEGL-SKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNN 132 (570)
Q Consensus 54 v~L~GVNw~g~~~~~v~~Gl-~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~n 132 (570)
-+++||++. .. ...|- ......+.++.|++.|+|.|||.+.+..-+.. .+ . + ..
T Consensus 34 ~~i~Gis~~-~~---~~~~~~~~~~~~~~l~~lk~~g~N~VrL~v~~~~~~~~--~~-~----------------~-~~- 88 (343)
T 3civ_A 34 GFIRGMTFG-FV---GQHGTWGTDEARASMRALAEQPFNWVTLAFAGLMEHPG--DP-A----------------I-AY- 88 (343)
T ss_dssp CCEEEEEES-TT---CBTTGGGSHHHHHHHHHHHHSSCSEEEEEEEEEESSTT--CC-C----------------C-BC-
T ss_pred cceeeEEec-cc---cCCCCcCchhHHHHHHHHHHcCCCEEEEEeeecCCCCC--CC-c----------------c-cc-
Confidence 369999983 21 12222 22235688999999999999998765421110 00 0 0 00
Q ss_pred CCCCCchHHHHHHHHHHHHhcCCCEEEEecCCC--CCCccccCCCCCCCCCCC----CCCHHHHHHHHHHHHHHhC---C
Q 008330 133 PSIVDLPLIKAFQAVVASLGNNNVMVILDNHIS--KPGWCCSNSDGNGFFGDQ----YFNPDLWIKGLTKMATIFN---G 203 (570)
Q Consensus 133 P~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~--~~~w~~~~~dgng~~~d~----~~~~~~~~~~w~~iA~ryk---~ 203 (570)
...+..-.+.+.++++.|.++||+|+|+.|.. .+.|-.. . .+ .++ ...-+.|..-++.+..+|+ .
T Consensus 89 -~~~~t~~~~~v~~~~~~Ak~~GL~V~l~p~i~~~~g~w~g~-i---~~-~~~~~~~~~~w~~~f~~y~~~i~~~a~~a~ 162 (343)
T 3civ_A 89 -GPPVTVSDDEIASMAELAHALGLKVCLKPTVNCRDGTWRGE-I---RF-EKEHGPDLESWEAWFGSYSDMMAHYAHVAK 162 (343)
T ss_dssp -STTTBCCHHHHHHHHHHHHHTTCEEEEEEEEEETTCCCGGG-C---CC-SBSCCTTSSBHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCCCCCHHHHHHHHHHHHHCCCEEEEEEEeeccCCccccc-c---cc-cCcCCcchHHHHHHHHHHHHHHHHHHHHcc
Confidence 00111245789999999999999999999975 2344100 0 00 110 0112333333333333332 2
Q ss_pred CCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEEEEEeecCCC
Q 008330 204 VRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAHWYGFT 283 (570)
Q Consensus 204 ~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlVys~H~Y~~~ 283 (570)
..+|+.+.+-||+........ ++.+++++||+++|. +|..-...|..+. +.+ ++.--|++++.|.+.
T Consensus 163 ~~~V~~~~IGNE~~~~~~~~~----~~~~Li~~vR~~~~g-~VTya~~~~~~~~-------~~l-w~~~DvIgin~Y~~~ 229 (343)
T 3civ_A 163 RTGCEMFCVGCEMTTAEPHEA----MWRETIARVRTEYDG-LVTYNCNHGREEH-------VRF-WDAVDLISSSAYYPI 229 (343)
T ss_dssp HTTCSEEEEEESCTTTTTCHH----HHHHHHHHHHHHCCS-EEEEEEETTCTTT-------CSC-GGGSSEEEEECCCCG
T ss_pred CCCceEEEECCCCCCCCchHH----HHHHHHHHHHhhCCC-CEEEEecCccccc-------ccc-cccCCEEEEeccCCc
Confidence 235788999999987643333 445678999999997 6665322221111 000 112337899988753
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCc---------------chHHHHHHHHHHHHHC
Q 008330 284 DGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNV---------------NDNRYLNCFFGVAAEL 348 (570)
Q Consensus 284 ~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~---------------~~~~~~~~~~~~~~~~ 348 (570)
. .| ..+.+.+. +.....+.||+++|||++...+.. ...+|++.+++.+++.
T Consensus 230 ~--~w---------~~~~~~l~---~~~~~~~KPIiitE~G~~s~~g~~~~p~~~~~~~~~se~~Qa~~l~~~~~~~~~~ 295 (343)
T 3civ_A 230 D--RW---------RDRVPVLR---EVAEAHEKPLFFMEVGCPSRSGSGACPWDYRHPGAVCLDEQARFYEAMFAAMPDE 295 (343)
T ss_dssp G--GH---------HHHHHHHH---HHHHHHTCCEEEEEECCCSBTTGGGSTTCTTCCCCBCHHHHHHHHHHHHHHSCCC
T ss_pred h--hH---------HHHHHHHH---HHHHHhCCCEEEEeeCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 1 11 12222222 121236899999999998643310 1357788888887765
Q ss_pred C--CceEEeccC
Q 008330 349 D--WDWALWTLV 358 (570)
Q Consensus 349 g--igw~~W~~~ 358 (570)
. .|-++|.|.
T Consensus 296 ~~~~G~~vW~w~ 307 (343)
T 3civ_A 296 PWFKGYMLWEWP 307 (343)
T ss_dssp TTEEEEEEEEEC
T ss_pred CCccEEEEEEEC
Confidence 4 255677775
|
| >3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.4e-09 Score=115.24 Aligned_cols=136 Identities=12% Similarity=0.061 Sum_probs=99.9
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++ | +.-.++..++.++++|+++.++||.
T Consensus 61 ~~eDi~lm~~~G~~~~R~si~Wsri~P~---------------------G-----~g~~n~~G~~~y~~lid~l~~~GI~ 114 (453)
T 3ahx_A 61 YKEDVQLLKSLGIKSYRFSIAWPRIFPK---------------------G-----FGEINQKGIQFYRDLIDELIKNDIE 114 (453)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHCTT---------------------S-----SSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHhCCCeEecccCHHHhccC---------------------C-----CCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 5899999999999999999999766542 0 2234567899999999999999999
Q ss_pred EEEecCC-CCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCC------------CC-CCh
Q 008330 158 VILDNHI-SKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG------------PK-QNV 223 (570)
Q Consensus 158 VILD~H~-~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~------------~~-~~~ 223 (570)
+||++|+ ..|.|.... .+|. ++ ...+.|.++++.+++||++. |..+.++|||.. +. .+.
T Consensus 115 p~vtL~h~d~P~~l~~~---ggw~-~r-~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 187 (453)
T 3ahx_A 115 PAITIYHWDLPQKLQDI---GGWA-NP-QVADYYVDYANLLFREFGDR--VKTWITHNEPWVASYLGYALGVHAPGIKDM 187 (453)
T ss_dssp EEEEEESSCCBHHHHTT---TGGG-SH-HHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSSSSTTCCCCH
T ss_pred EEEEecCCCccHhHhhC---CCCC-Cc-hHHHHHHHHHHHHHHHhCCc--cceEEEccCcchhhccccccCcCCCCcccH
Confidence 9999965 445554321 2333 33 24688999999999999988 778999999964 11 111
Q ss_pred hHHH-------HHHHHHHHHHHhcCCCcEE
Q 008330 224 KDWY-------RYMQLGAEAVHAANPEVLV 246 (570)
Q Consensus 224 ~~W~-------~~~~~~~~aIr~~dp~~lI 246 (570)
..-+ ....++++++|+++|+.-|
T Consensus 188 ~~~~~a~h~~llAha~Av~~~r~~~~~~~I 217 (453)
T 3ahx_A 188 KMALLAAHNILLSHFKAVKAYRELEQDGQI 217 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 1111 2235788899999997543
|
| >2dry_A 29-kDa galactose-binding lectin; earthworm lumbricus terrestris, sialic acid, in vitro evolution, beta-trefoil fold, sugar binding protein; HET: PGE; 1.80A {Lumbricus terrestris} PDB: 2drz_A* 2ds0_A* 2zqn_A* 2zqo_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.3e-10 Score=104.39 Aligned_cols=102 Identities=13% Similarity=0.032 Sum_probs=81.6
Q ss_pred CccceeeCCCCceeeeecCC----CCceecCCCCCC-----CCccccCCcceeecccceEEeeccCCccceeccccC-CC
Q 008330 409 GLHKVIYHPATGLCVQRKSF----LDPLTLGPCTES-----EAWSYTPHKTISLKGAYFCLQAKHVGKPAKLGIICT-DC 478 (570)
Q Consensus 409 ~~~~~~~~~~tg~c~~~~~~----~~~~~~~~c~~~-----~~W~~~~~~~~~~~~~~~cl~a~~~g~~~~~~~~c~-~~ 478 (570)
|.++.|....||+|+++.+. .+++.+++|++. ++|.+++++.|+.+.+++||++.| ..+.+ +.|. +.
T Consensus 1 Pt~y~i~n~~SGk~LDV~g~s~~~Ga~v~~w~~~~~~~~~nQ~W~~~~~g~i~~~~sg~cLD~~G--~~v~~-~~c~g~~ 77 (130)
T 2dry_A 1 PKFFYIKSELNGKVLDIGGQNPAPGSKIITWDQKKGPTAVNQLWYTDQQGVIRSKLNDFAIDASH--EQIET-QPFDPNN 77 (130)
T ss_dssp CCCEEEEETTTSCEEEEGGGCCSTTCBEEEECCCCSGGGGGGCEEECTTCCEEETTTCCEEECSS--SSCEE-ECCCTTC
T ss_pred CcEEEEEECCCCCEEEECCCCcCCCceEEEEEecCCCCchheEEEEecceeEEEccCCeeEEecC--CceEE-EecCCCc
Confidence 45789999999999999553 367999999874 799999999998888999999864 55666 8898 77
Q ss_pred CCceeEeeccccEEEEecCCCceEEEeecC----CC-ceeecce
Q 008330 479 GSTWEIISDSKMHLSSKADNGTTVCLDVDS----SN-TIVTNTC 517 (570)
Q Consensus 479 ~~~W~~~s~~~~~~~~~~~~~~~~cld~~~----~~-~~~~~~c 517 (570)
+|+|.+.+++.+. ....+.+||||.+ +| +|+.+.|
T Consensus 78 ~Qqw~~~~~g~~~----~~~~sg~cLDv~g~st~~G~~v~~w~~ 117 (130)
T 2dry_A 78 PKRAWIVSGNTIA----QLSDRDNVLGVIKSDKGASAHICAWKQ 117 (130)
T ss_dssp GGGCEEEETTEEE----ETTEEEEEEEEECCSSSSCCEEEEEEC
T ss_pred ceeEEEeCCCcEE----EecccCceEEccCCCCCCCCEEEEECC
Confidence 8999999888742 2235789999973 55 6777876
|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.6e-09 Score=112.46 Aligned_cols=248 Identities=13% Similarity=0.209 Sum_probs=152.3
Q ss_pred HHHHHHHHHcCCcEEEe--cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 79 DMLSKRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRl--Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
.+..+.+ +.+||.|++ .+.|..+++. +...+ +..+|++|+.|.++||
T Consensus 28 ~~~~~~~-~~~fn~vt~eN~~kW~~~ep~---------------------------~g~~~---f~~~D~~v~~a~~~gi 76 (331)
T 1n82_A 28 EMQKQLL-IDHVNSITAENHMKFEHLQPE---------------------------EGKFT---FQEADRIVDFACSHRM 76 (331)
T ss_dssp HHTHHHH-HHHCSEEEESSTTSHHHHCSB---------------------------TTBCC---CHHHHHHHHHHHHTTC
T ss_pred HHHHHHH-HhcCCEEEECCcccHHHhCCC---------------------------CCccC---hHHHHHHHHHHHHCCC
Confidence 3344555 669999999 6777655431 11112 4679999999999999
Q ss_pred EEEEe---cCCCCCCccccCCCCCCCCCCCCCC----HHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCC----hhH
Q 008330 157 MVILD---NHISKPGWCCSNSDGNGFFGDQYFN----PDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQN----VKD 225 (570)
Q Consensus 157 ~VILD---~H~~~~~w~~~~~dgng~~~d~~~~----~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~----~~~ 225 (570)
.|+.. .|...|.|.....++. ..+ .+.+.++.+.|++||++ .|.++|+.|||....+. ...
T Consensus 77 ~v~ghtlvW~~q~P~W~~~~~~g~------~~~~~~~~~~~~~~i~~v~~rY~g--~v~~wdv~NE~~~~~g~~~~r~s~ 148 (331)
T 1n82_A 77 AVRGHTLVWHNQTPDWVFQDGQGH------FVSRDVLLERMKCHISTVVRRYKG--KIYCWDVINEAVADEGDELLRPSK 148 (331)
T ss_dssp EEEEEEEEESSSCCGGGGBCSSSS------BCCHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCSSSSCSBCCCH
T ss_pred EEEEEeeecCCCCChhhccCCCCC------CCCHHHHHHHHHHHHHHHHHHhcC--CceEEeeecccccCCCccccccch
Confidence 99753 4887888865321111 123 34567788899999999 58999999999653211 124
Q ss_pred HH-----HHHHHHHHHHHhcCCCcEEEEeCCCCCC-c-----chhhh---hcccCcCCCCCEEEEEeecCCCCCCCCCCC
Q 008330 226 WY-----RYMQLGAEAVHAANPEVLVILSGLNFDK-D-----LSFVR---NQAVNLTFTGKLVFEAHWYGFTDGQAWVDG 291 (570)
Q Consensus 226 W~-----~~~~~~~~aIr~~dp~~lIiVeG~~w~~-d-----l~~~~---~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~ 291 (570)
|+ .++.++.+++|+++|+..+++...+-.. . +..+. ...+ +. +-+=+..|+-.. +
T Consensus 149 ~~~~~g~~~i~~af~~Ar~~dP~a~L~~Ndyn~~~~~k~~~~~~~v~~l~~~g~--~i-dgiG~Q~H~~~~--~------ 217 (331)
T 1n82_A 149 WRQIIGDDFMEQAFLYAYEADPDALLFYNDYNECFPEKREKIFALVKSLRDKGI--PI-HGIGMQAHWSLT--R------ 217 (331)
T ss_dssp HHHHHCTTHHHHHHHHHHHHCTTSEEEEEESSTTSHHHHHHHHHHHHHHHHTTC--CC-CEEEECCEEESS--S------
T ss_pred HHHhcCHHHHHHHHHHHHHHCCCCEEEEecccCCCchhHHHHHHHHHHHHHCCC--cc-ceEEeceecCCC--C------
Confidence 54 4678899999999999999987643111 0 01111 1111 11 233333465210 0
Q ss_pred CCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC--------------cchHHHHHHHHHHHHHCC--Cc-eEE
Q 008330 292 NPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN--------------VNDNRYLNCFFGVAAELD--WD-WAL 354 (570)
Q Consensus 292 ~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~--------------~~~~~~~~~~~~~~~~~g--ig-w~~ 354 (570)
+ ..+.+.+.+++ +.+.|+||.|+|+++...... .....+++.++..+.++. ++ -++
T Consensus 218 -~--~~~~~~~~l~~----~a~~G~pi~iTEldi~~~~~~~~~~~~~~~~~~~~~~qA~~~~~~~~~~~~~~~~v~git~ 290 (331)
T 1n82_A 218 -P--SLDEIRAAIER----YASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALFKEYRDVIQSVTF 290 (331)
T ss_dssp -S--CHHHHHHHHHH----HHTTTCEEEEEEEEEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEE
T ss_pred -C--CHHHHHHHHHH----HHhcCCeEEEEeceecCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 1 12345555543 335799999999999764211 124577788888877765 55 789
Q ss_pred eccCceeecccCccCC--CceeeeecCCCCC
Q 008330 355 WTLVGSYYLREGVIGL--NEYYGLFDWNWCD 383 (570)
Q Consensus 355 W~~~G~y~~r~~~~~~--~et~Gll~~dw~~ 383 (570)
|.+...|-.+.+.+.. .+..||++.|+..
T Consensus 291 Wg~~D~~sW~~~~p~~g~~~~~~Lfd~~~~p 321 (331)
T 1n82_A 291 WGIADDHTWLDNFPVHGRKNWPLLFDEQHKP 321 (331)
T ss_dssp SCSBTTSCGGGTSSSTTCCCCCSSBCTTSCB
T ss_pred ECCCCCCccCCCCCCCCCCCccccCCCCCCC
Confidence 9887554444333322 2335888888653
|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=3e-10 Score=117.15 Aligned_cols=245 Identities=15% Similarity=0.204 Sum_probs=149.0
Q ss_pred HHHHHHHHHcCCcEEEe--cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 79 DMLSKRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRl--Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.....|.+.+||.||+ .+.|..+++. |...+ +..+|++|+.|.++||
T Consensus 26 ~~~~~~~~~~~fn~~t~en~~kW~~~ep~---------------------------~g~~~---~~~~D~~~~~a~~~gi 75 (315)
T 3cui_A 26 EAQYKAIADSEFNLVVAENAMKWDATEPS---------------------------QNSFS---FGAGDRVASYAADTGK 75 (315)
T ss_dssp SHHHHHHHHHHCSEEEESSTTSHHHHCSB---------------------------TTBCC---CHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHhcCCEEEECCcccHHHhCCC---------------------------CCcCC---hHHHHHHHHHHHHCCC
Confidence 34566777789999999 6777655431 11112 4678999999999999
Q ss_pred EEEEe---cCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCC-CC--hhHHH---
Q 008330 157 MVILD---NHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPK-QN--VKDWY--- 227 (570)
Q Consensus 157 ~VILD---~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~-~~--~~~W~--- 227 (570)
.|+.. .|...|.|..+ +... .-.+.+.++.+.|++||++. |.++|+.|||.... +. ...|+
T Consensus 76 ~v~ghtl~W~~~~P~W~~~-------~~~~-~~~~~~~~~i~~v~~ry~g~--v~~WdV~NE~~~~~~g~~r~~~~~~~~ 145 (315)
T 3cui_A 76 ELYGHTLVWHSQLPDWAKN-------LNGS-AFESAMVNHVTKVADHFEGK--VASWDVVNEAFADGGGRRQDSAFQQKL 145 (315)
T ss_dssp EEEEEEEEESSSCCHHHHT-------CCHH-HHHHHHHHHHHHHHHHHTTT--CCEEEEEECCBCTTSSBCSSCHHHHHH
T ss_pred EEEEEeeecCCCCCHHHhc-------CCHH-HHHHHHHHHHHHHHHHcCCc--eEEEEeecccccCCCCccccchHHHhc
Confidence 99754 37666766421 0000 11356677888999999995 88999999997542 11 12453
Q ss_pred --HHHHHHHHHHHhcCCCcEEEEeCCCCCC-c------chh---hhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcc
Q 008330 228 --RYMQLGAEAVHAANPEVLVILSGLNFDK-D------LSF---VRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQ 295 (570)
Q Consensus 228 --~~~~~~~~aIr~~dp~~lIiVeG~~w~~-d------l~~---~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~ 295 (570)
.++..+.+++|+++|+..+++...+-.. . +.. +....+ +. +-+=+..|+.....
T Consensus 146 g~~~i~~af~~Ar~~dP~a~l~~ndy~~~~~~~k~~~~~~~v~~l~~~G~--~i-DgiG~Q~H~~~~~~----------- 211 (315)
T 3cui_A 146 GNGYIETAFRAARAADPTAKLCINDYNVEGINAKSNSLYDLVKDFKARGV--PL-DCVGFQSHLIVGQV----------- 211 (315)
T ss_dssp CTTHHHHHHHHHHHHCSSSEEEEEESSCSSSSHHHHHHHHHHHHHHHHTC--CC-CEEEECCEEETTCC-----------
T ss_pred cHHHHHHHHHHHHhhCCCCEEEECCccccCcchHHHHHHHHHHHHHHCCC--cc-cEEEeeeecCCCCC-----------
Confidence 4678889999999999999886432111 1 111 111111 12 23434446543211
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC-----cchHHHHHHHHHHHHHCC--CceEEeccCceeecccC-c
Q 008330 296 VCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN-----VNDNRYLNCFFGVAAELD--WDWALWTLVGSYYLREG-V 367 (570)
Q Consensus 296 ~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~-----~~~~~~~~~~~~~~~~~g--igw~~W~~~G~y~~r~~-~ 367 (570)
++.+.+.+++ +.+.|.||+|+|+|+....+. .....+++.++..+.+.. .|-++|.+...|-.+.+ .
T Consensus 212 -~~~~~~~l~~----~a~~g~pv~iTE~di~~~~~~~~~~~~~qa~~~~~~~~~~~~~~~v~git~Wg~~D~~sW~~~~~ 286 (315)
T 3cui_A 212 -PGDFRQNLQR----FADLGVDVRITELDIRMRTPSDATKLATQAADYKKVVQACMQVTRCQGVTVWGITDKYSWVPDVF 286 (315)
T ss_dssp -CTTHHHHHHH----HHTTTCEEEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTSTTEEEEEESCSBTTTCSHHHHS
T ss_pred -HHHHHHHHHH----HHhcCCceEEEecccccCCCCChHHHHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCccCCCCC
Confidence 1234444443 234789999999999742221 124577788888777763 57789987643322211 1
Q ss_pred cCCCceeeeecCCCCC
Q 008330 368 IGLNEYYGLFDWNWCD 383 (570)
Q Consensus 368 ~~~~et~Gll~~dw~~ 383 (570)
++ .+..||++.|+..
T Consensus 287 ~~-~~~~~Lfd~d~~p 301 (315)
T 3cui_A 287 PG-EGAALVWDASYAK 301 (315)
T ss_dssp TT-EECCSSBCTTSCB
T ss_pred CC-CCCceeECCCCCC
Confidence 11 1346788888643
|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.05 E-value=2.2e-09 Score=110.09 Aligned_cols=232 Identities=14% Similarity=0.176 Sum_probs=144.0
Q ss_pred HHHcCCcEEEe--cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEe-
Q 008330 85 VVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILD- 161 (570)
Q Consensus 85 i~~~GfN~VRl--Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD- 161 (570)
+.+.+||.|++ .+.|..+++. |... -+..+|++|+.|.++||.|...
T Consensus 34 ~~~~~fn~vt~en~~kW~~~ep~---------------------------~g~~---~f~~~D~~v~~a~~~gi~v~ght 83 (303)
T 1ta3_B 34 IVASQFGVITPENSMKWDALEPS---------------------------QGNF---GWSGADYLVDYATQHNKKVRGHT 83 (303)
T ss_dssp HHHHHCSEEEESSTTSHHHHCSB---------------------------TTBC---CCHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhhCCEEEECccccHHHhCCC---------------------------CCcc---CchHHHHHHHHHHHCCCEEEEee
Confidence 33679999999 7777655431 1111 1467999999999999999754
Q ss_pred --cCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCC--hhHHH-----HHHHH
Q 008330 162 --NHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQN--VKDWY-----RYMQL 232 (570)
Q Consensus 162 --~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~--~~~W~-----~~~~~ 232 (570)
.|...|.|..... +...-.+.+.++.+.|++||++. |.++|+.|||....+. ...|+ .++..
T Consensus 84 lvW~~q~P~W~~~~~-------~~~~~~~~~~~~i~~v~~rY~g~--v~~Wdv~NE~~~~~g~~r~s~~~~~~G~~~i~~ 154 (303)
T 1ta3_B 84 LVWHSQLPSWVSSIG-------DANTLRSVMTNHINEVVGRYKGK--IMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRI 154 (303)
T ss_dssp EECSSSCCHHHHTCC-------CHHHHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHH
T ss_pred ccccCCCChhhhcCC-------CHHHHHHHHHHHHHHHHHhcCCc--ceEEEeecCcccCCCCcccchHHHhccHHHHHH
Confidence 3766677753211 11001356678888999999986 8899999999543211 12353 56788
Q ss_pred HHHHHHhcCCCcEEEEeCCCCCC-c-------chh---hhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHH
Q 008330 233 GAEAVHAANPEVLVILSGLNFDK-D-------LSF---VRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVV 301 (570)
Q Consensus 233 ~~~aIr~~dp~~lIiVeG~~w~~-d-------l~~---~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~ 301 (570)
+.+++|+++|+..+++...+-.. + +.. +.... .+. +-+-+..|+..... + .+.+.
T Consensus 155 af~~Ar~~dP~a~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G--~~i-DgiG~Q~H~~~~~~--------~---~~~~~ 220 (303)
T 1ta3_B 155 AFETARAADPDAKLYINDYNLDSASYAKTQAMASYVKKWLAEG--VPI-DGIGSQAHYSSSHW--------S---STEAA 220 (303)
T ss_dssp HHHHHHHHCTTSEEEEEESCCCCTTSHHHHHHHHHHHHHHHTT--CCC-CEEEECCEECTTCC--------C---GGGHH
T ss_pred HHHHHHHHCCCCEEEeccccccCCchHHHHHHHHHHHHHHHCC--CCc-ceEEEeeecCCCCC--------C---HHHHH
Confidence 99999999999999997543111 0 001 11111 111 34445557754321 1 13345
Q ss_pred HHHHHHHHHHHhcCC-CeEEeccccCCCCCCcchHHHHHHHHHHHHHCC--CceEEeccCceeecccCccCCCceeeeec
Q 008330 302 DNVMRLSGFLLEQGW-PLFVSEFGADLRGNNVNDNRYLNCFFGVAAELD--WDWALWTLVGSYYLREGVIGLNEYYGLFD 378 (570)
Q Consensus 302 ~~~~~~~g~l~~~g~-Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~g--igw~~W~~~G~y~~r~~~~~~~et~Gll~ 378 (570)
+.+++ +.+.|+ ||.|+|+++... ...+++.++..+.++. .|-++|.+...|-.+. +...+|++
T Consensus 221 ~~l~~----~a~~G~~pi~iTEldi~~~-----qa~~y~~~~~~~~~~~~v~git~Wg~~D~~sW~~-----~~~~~l~d 286 (303)
T 1ta3_B 221 GALSS----LANTGVSEVAITELDIAGA-----ASSDYLNLLNACLNEQKCVGITVWGVSDKDSWRA-----SDSPLLFD 286 (303)
T ss_dssp HHHHH----HHTTCCSEEEEEEEEETTC-----CHHHHHHHHHHHHTCTTEEEEEESCSBGGGSTTG-----GGCCSSBC
T ss_pred HHHHH----HHHCCCCeEEEeeCCcChh-----HHHHHHHHHHHHHhCCCceEEEEecCCcCCCccC-----CCcceeEC
Confidence 55543 345789 999999999832 2345566777766653 5778998764433332 12357788
Q ss_pred CCCCC
Q 008330 379 WNWCD 383 (570)
Q Consensus 379 ~dw~~ 383 (570)
.|+..
T Consensus 287 ~~~~p 291 (303)
T 1ta3_B 287 GNYQP 291 (303)
T ss_dssp TTSCB
T ss_pred CCCCC
Confidence 77643
|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=5.6e-09 Score=110.20 Aligned_cols=251 Identities=14% Similarity=0.184 Sum_probs=152.1
Q ss_pred HHHHHHHcCCcEEEe--cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEE
Q 008330 81 LSKRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158 (570)
Q Consensus 81 ~~~~i~~~GfN~VRl--Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~V 158 (570)
..+.+ +.+||.||+ .+.|..+++. |...+ |..+|++|+.|.++||.|
T Consensus 53 ~~~l~-~~~fn~vt~eN~~kW~~~ep~---------------------------~G~~~---f~~~D~~v~~a~~~gi~v 101 (378)
T 1ur1_A 53 LNTLI-AKEFNSITPENCMKWGVLRDA---------------------------QGQWN---WKDADAFVAFGTKHNLHM 101 (378)
T ss_dssp HHHHH-HHHCSEEEESSTTSHHHHBCT---------------------------TCCBC---CHHHHHHHHHHHHTTCEE
T ss_pred HHHHH-HccCCeEEECCcccHHHhcCC---------------------------CCccC---chHHHHHHHHHHHCCCEE
Confidence 34444 569999999 6777655431 11111 467999999999999999
Q ss_pred EEe---cCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCC--ChhHHH-----H
Q 008330 159 ILD---NHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQ--NVKDWY-----R 228 (570)
Q Consensus 159 ILD---~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~--~~~~W~-----~ 228 (570)
... .|...|.|.....++.. +... .-.+.+.++.+.|++|||+ .|..+|+.|||....+ ....|+ .
T Consensus 102 rgHtlvW~~q~P~W~~~d~~g~~-~~~~-~~~~~~~~~I~~v~~rY~g--~i~~wdv~NE~~~~~g~~r~s~~~~~lG~d 177 (378)
T 1ur1_A 102 VGHTLVWHSQIHDEVFKNADGSY-ISKA-ALQKKMEEHITTLAGRYKG--KLAAWDVVNEAVGDDLKMRDSHWYKIMGDD 177 (378)
T ss_dssp EEEEEECSSSSCGGGTBCTTSCB-CCHH-HHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCTTSSBCCCHHHHHHTTH
T ss_pred EeecccccccCchhhhcCCCCCC-CCHH-HHHHHHHHHHHHHHHHhCC--cceEEEeecccccCCCCccCChhhhhccHH
Confidence 643 48777888643222211 1000 1135667888999999999 5889999999975321 112354 5
Q ss_pred HHHHHHHHHHhcCCCcEEEEeCCCCCC-c-----chh---hhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhH
Q 008330 229 YMQLGAEAVHAANPEVLVILSGLNFDK-D-----LSF---VRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGR 299 (570)
Q Consensus 229 ~~~~~~~aIr~~dp~~lIiVeG~~w~~-d-----l~~---~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~ 299 (570)
+++.+.++.|+++|+..+++...+-.. . +.. +....+ ++ +-+=+..|+-.. + + ..+.
T Consensus 178 ~i~~af~~Ar~~dP~a~L~~Ndyn~~~~~k~~~~~~~v~~l~~~g~--~i-DgiG~Q~H~~~~--~-------p--~~~~ 243 (378)
T 1ur1_A 178 FIYNAFTLANEVDPKAHLMYNDYNIERTGKREATVEMIERLQKRGM--PI-HGLGIQGHLGID--T-------P--PIAE 243 (378)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEESSTTSTTHHHHHHHHHHHHHHTTC--CC-CEEEECCEEESS--C-------S--CHHH
T ss_pred HHHHHHHHHHHhCCCCEEEeccccccccchhHHHHHHHHHHHHCCC--Cc-ceEEecCcCCCC--C-------C--CHHH
Confidence 678899999999999999997643111 0 011 111111 11 234444465210 0 1 1234
Q ss_pred HHHHHHHHHHHHHhcCCCeEEeccccCCCCC--------------------------C----cchHHHHHHHHHHHHHCC
Q 008330 300 VVDNVMRLSGFLLEQGWPLFVSEFGADLRGN--------------------------N----VNDNRYLNCFFGVAAELD 349 (570)
Q Consensus 300 ~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~--------------------------~----~~~~~~~~~~~~~~~~~g 349 (570)
+.+.+++ +.+.|+||.|+|+++..... . ....++++.++..+.++.
T Consensus 244 i~~~l~~----~a~~Gl~i~iTElDi~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~QA~~y~~~~~~~~~~~ 319 (378)
T 1ur1_A 244 IEKSIIA----FAKLGLRVHFTSLDVDVLPSVWELPVAEVSTRFEYKPERDPYTKGLPQEMQDKLAKRYEDLFKLFIKHS 319 (378)
T ss_dssp HHHHHHH----HHTTTCEEEEEEEEEECSCCCCC----CTTTTTSCCGGGCTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHH----HHhcCCeEEEEecccCCCCccccccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 5555543 34579999999999865421 0 112567777788777764
Q ss_pred --Cc-eEEeccCceeecccCccC--CCceeeeecCCCCCc
Q 008330 350 --WD-WALWTLVGSYYLREGVIG--LNEYYGLFDWNWCDI 384 (570)
Q Consensus 350 --ig-w~~W~~~G~y~~r~~~~~--~~et~Gll~~dw~~~ 384 (570)
++ -++|.+...|-.+.+.+. ..+.-+|++.|+..-
T Consensus 320 ~~V~git~WG~~D~~sW~~~~p~~g~~~~plLfd~~~~pK 359 (378)
T 1ur1_A 320 DKIDRATFWGVSDDASWLNGFPIPGRTNYPLLFDRKLQPK 359 (378)
T ss_dssp TTEEEEEESCSBGGGCGGGTSSSTTCCCCCSSBCTTSCBC
T ss_pred CceeEEEEECCccCCCcCCCCCCCCCCCcceeECCCCCCC
Confidence 55 789988755544443332 223346888887543
|
| >3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.04 E-value=8.3e-10 Score=118.73 Aligned_cols=184 Identities=14% Similarity=0.192 Sum_probs=123.8
Q ss_pred CCCCCCCeEe--cCCeEEcCCCCEEEEEEee-CCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccc
Q 008330 32 KPAIGLPLST--NSRWIVDENGHRVKLACVN-WVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLA 108 (570)
Q Consensus 32 ~~~~~~~L~t--~G~~IVd~~G~~v~L~GVN-w~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~ 108 (570)
.+...++|++ +||.|+.++|+|+..-|-. |.. ++-+.....+..++..++.|||+||+-+-...-..+.+.
T Consensus 11 ~~~~hg~l~Vs~~~r~f~~~dG~PFf~lgDT~W~l------~~~l~~~e~~~yL~~R~~qGFNvIq~~vl~~~p~~n~~g 84 (463)
T 3kzs_A 11 IPWSNGKLVVSEEGRYLKHENGTPFFWLGETGWLL------PERLNRDEAEYYLEQCKRRGYNVIQVQTLNNVPSMNIYG 84 (463)
T ss_dssp CGGGGCCEEECTTSSCEEETTSCBCCEEEEECTTH------HHHCCHHHHHHHHHHHHHTTCCEEEEESCSSSSCBCTTS
T ss_pred CcccCCCeEEcCCCceEecCCCCeEEechhHHHHH------hcCCCHHHHHHHHHHHHHCCCCEEEEEeecCCCCCCcCC
Confidence 3456677877 5889999999999876654 431 233333457788999999999999997631100001111
Q ss_pred cchhhhhhhhccchhhccCcccCCCCCCC-chHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCH
Q 008330 109 SLTVRQSFQKLGLLEAIGGIQSNNPSIVD-LPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNP 187 (570)
Q Consensus 109 n~tv~~s~~~lg~~~~~~g~~~~nP~~~~-~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~ 187 (570)
..+..+ +..-.+|.-.+ +.+|+.+|++|+.|.++||++-|= +-|+..-. ...++.
T Consensus 85 ~~pf~~------------~~df~~~n~pn~~~YF~h~d~~I~~a~~~Gi~~~Lv-----~~Wg~~v~-------~~~m~~ 140 (463)
T 3kzs_A 85 QYSMTD------------GYNFKNINQKGVYGYWDHMDYIIRTAAKKGLYIGMV-----CIWGSPVS-------HGEMNV 140 (463)
T ss_dssp CBSCSS------------TTCCTTCCCTTCCCHHHHHHHHHHHHHHTTCEEEEE-----SSCHHHHH-------TTSCCH
T ss_pred CCCcCC------------CcccccCCCcCHHHHHHHHHHHHHHHHHCCCeEEEE-----EEeCCccc-------cCCCCH
Confidence 111100 00000111112 279999999999999999998763 23642210 113678
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCC
Q 008330 188 DLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGL 251 (570)
Q Consensus 188 ~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~ 251 (570)
+....+++.|++||++.+||+ +.|-||=... ...+.|. ++++.|++.+|++|+.+=..
T Consensus 141 e~~~~Y~ryl~~Ry~~~~Nii-W~lgGD~~~~-~~~~~w~----~~~~~i~~~dp~~L~T~H~~ 198 (463)
T 3kzs_A 141 DQAKAYGKFLAERYKDEPNII-WFIGGDIRGD-VKTAEWE----ALATSIKAIDKNHLMTFHPR 198 (463)
T ss_dssp HHHHHHHHHHHHHHTTCSSEE-EEEESSSCTT-SSHHHHH----HHHHHHHHHCCSSCEEEECC
T ss_pred HHHHHHHHHHHHHhccCCCCE-EEeCCCCCCc-cCHHHHH----HHHHHHHhcCCCCcEEEeCC
Confidence 899999999999999999998 9999997654 3455665 44688899999999999653
|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
Probab=99.03 E-value=3.2e-09 Score=111.31 Aligned_cols=251 Identities=13% Similarity=0.209 Sum_probs=150.0
Q ss_pred HHHHHHHcCCcEEEe--cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEE
Q 008330 81 LSKRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158 (570)
Q Consensus 81 ~~~~i~~~GfN~VRl--Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~V 158 (570)
..+.| +.+||.|++ .+.|..+++. +... -+..+|++|+.|.++||.|
T Consensus 31 ~~~l~-~~~fn~vt~en~~kW~~~ep~---------------------------~g~~---~f~~~D~~v~~a~~~gi~v 79 (356)
T 2dep_A 31 IAELY-KKHVNMLVAENAMKPASLQPT---------------------------EGNF---QWADADRIVQFAKENGMEL 79 (356)
T ss_dssp HHHHH-HHHCSEEEESSTTSHHHHCSB---------------------------TTBC---CCHHHHHHHHHHHHTTCEE
T ss_pred HHHHH-HhhCCEEEECCcccHHHhcCC---------------------------CCcc---CchHHHHHHHHHHHCCCEE
Confidence 44444 689999999 6777655431 1111 1467899999999999999
Q ss_pred EEe---cCCCCCCccccCCCCCC-CCCCC----CCC----HHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCC--C--C
Q 008330 159 ILD---NHISKPGWCCSNSDGNG-FFGDQ----YFN----PDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPK--Q--N 222 (570)
Q Consensus 159 ILD---~H~~~~~w~~~~~dgng-~~~d~----~~~----~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~--~--~ 222 (570)
+.. .|...|.|.....+|.. .++.. ..+ .+.+.++.+.|++||++ .|..+|+.|||.... + .
T Consensus 80 ~ghtlvW~~q~P~W~~~~~~g~~~~~g~r~~~~~~~~~~~~~~~~~~i~~v~~rY~g--~v~~wdv~NE~~~~~~~g~~r 157 (356)
T 2dep_A 80 RFHTLVWHNQTPDWFFLDKEGKPMVEETDPQKREENRKLLLQRLENYIRAVVLRYKD--DIKSWDVVNEVIEPNDPGGMR 157 (356)
T ss_dssp EEEEEEESSSCCGGGGBCTTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEECCBCTTSGGGBC
T ss_pred EEeeccccccCchhhhccCcCCccccccccccCCCCHHHHHHHHHHHHHHHHHHhCC--ceeEEEeecccccCCCCCCcc
Confidence 864 38777889754222220 01100 012 24566788899999999 588999999997542 1 1
Q ss_pred hhHHH-----HHHHHHHHHHHh-cCCCcEEEEeCCCCCCc------chhh---hhcccCcCCCCCEEEEEeecCCCCCCC
Q 008330 223 VKDWY-----RYMQLGAEAVHA-ANPEVLVILSGLNFDKD------LSFV---RNQAVNLTFTGKLVFEAHWYGFTDGQA 287 (570)
Q Consensus 223 ~~~W~-----~~~~~~~~aIr~-~dp~~lIiVeG~~w~~d------l~~~---~~~p~~l~~~~nlVys~H~Y~~~~~~~ 287 (570)
...|+ .++..+.+++|+ +||+..+++...+-... +..+ .... .++ +-+=+..|+....
T Consensus 158 ~s~~~~~~G~~~i~~af~~Ar~~~dP~a~L~~Ndyn~~~~~k~~~~~~~v~~l~~~G--~~i-dgiG~Q~H~~~~~---- 230 (356)
T 2dep_A 158 NSPWYQITGTEYIEVAFRATREAGGSDIKLYINDYNTDDPVKRDILYELVKNLLEKG--VPI-DGVGHQTHIDIYN---- 230 (356)
T ss_dssp CCHHHHHHTTHHHHHHHHHHHHHHCSSSEEEEEESCTTSHHHHHHHHHHHHHHHHTT--CCC-CEEEECCEEESSC----
T ss_pred CChHHHhccHHHHHHHHHHHHHhcCCCcEEEeccccccCcchHHHHHHHHHHHHHCC--CCc-cEEEeeeeecCCC----
Confidence 12454 477899999999 99999999976432110 0111 1111 111 2233333754210
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC--------------cchHHHHHHHHHHHHHC--CC-
Q 008330 288 WVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN--------------VNDNRYLNCFFGVAAEL--DW- 350 (570)
Q Consensus 288 w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~--------------~~~~~~~~~~~~~~~~~--gi- 350 (570)
+ ..+.+.+.+++ +.+.|+||.|+|+++...... .....+++.++..+.++ .+
T Consensus 231 -----p--~~~~~~~~l~~----~a~~Glpi~iTEldv~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~v~ 299 (356)
T 2dep_A 231 -----P--PVERIIESIKK----FAGLGLDNIITELDMSIYSWNDRSDYGDSIPDYILTLQAKRYQELFDALKENKDIVS 299 (356)
T ss_dssp -----S--CHHHHHHHHHH----HHTTTCEEEEEEEEEESSCTTCCCCCCSCCCHHHHHHHHHHHHHHHHHHHTTGGGEE
T ss_pred -----C--CHHHHHHHHHH----HHhCCCeEEEeeceecCCCccccccccCCCCHHHHHHHHHHHHHHHHHHHhhcCCee
Confidence 1 12345555543 335799999999998754211 11345667777777764 34
Q ss_pred ceEEeccCceeecccCccCCCceee-eecCCCC
Q 008330 351 DWALWTLVGSYYLREGVIGLNEYYG-LFDWNWC 382 (570)
Q Consensus 351 gw~~W~~~G~y~~r~~~~~~~et~G-ll~~dw~ 382 (570)
+-++|.+...|-.+.+.+.....++ |++.|+.
T Consensus 300 gvt~Wg~~D~~sW~~~~p~g~~~~plLfd~~~~ 332 (356)
T 2dep_A 300 AVVFWGISDKYSWLNGFPVKRTNAPLLFDRNFM 332 (356)
T ss_dssp EEEESCSBTTSCGGGTSSSSSCCCCSSBCTTSC
T ss_pred EEEEecCccCCCcccCCCCCCCCcceeECCCCC
Confidence 6789998755544433333213444 6777764
|
| >3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.3e-09 Score=115.75 Aligned_cols=275 Identities=13% Similarity=0.148 Sum_probs=154.1
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhh----------------hhhhhccchhhccCcccCCCCCCCchHH
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVR----------------QSFQKLGLLEAIGGIQSNNPSIVDLPLI 141 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~----------------~s~~~lg~~~~~~g~~~~nP~~~~~t~l 141 (570)
.+++++.|+++|+|++|+.++|..+.+..-....+. +.|..|. .+.++..+
T Consensus 62 y~eDi~l~~~lG~~~~R~si~WsRI~P~~g~~~~~n~~~~~~~~~~~~~~~~~~l~~l~-------------~~an~~g~ 128 (473)
T 3apg_A 62 YKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELE-------------KIANMEAL 128 (473)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHCCSCCTTSCCEEEECTTSCEEEEECCHHHHHHHH-------------HHSCHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecchhhccccCCCCCCcccccccccccccccchhhHHHHHH-------------hhhhHHHH
Confidence 589999999999999999999987765310000010 0000000 01236789
Q ss_pred HHHHHHHHHHhcCCCEEEEecCC-CCCCccccCC-------CC--CCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEe
Q 008330 142 KAFQAVVASLGNNNVMVILDNHI-SKPGWCCSNS-------DG--NGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMS 211 (570)
Q Consensus 142 ~~ld~vV~~a~~~Gl~VILD~H~-~~~~w~~~~~-------dg--ng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~d 211 (570)
+.++++|+.+.++||.+||.+++ +.|.|..... ++ .||.+.+ ..+.|.++-+.+|+||++. |..+.
T Consensus 129 ~~Y~~~id~l~~~Gi~pivtL~H~~lP~wl~d~~~~~~~~~~~~~~Gw~~~~--~v~~F~~ya~~~~~~~gd~--V~~W~ 204 (473)
T 3apg_A 129 EHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEK--TVVEFVKFAAFVAYHLDDL--VDMWS 204 (473)
T ss_dssp HHHHHHHHHHHTTTCEEEEESCCSCCCTTTBCHHHHHHHCTTSSCBGGGSHH--HHHHHHHHHHHHHHHHGGG--CSEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCCCHHHHhCCCccccccCCccCCCCCcc--HHHHHHHHHHHHHHHhCCc--ceEEE
Confidence 99999999999999999999854 5677854310 11 1443322 3678899999999999987 77899
Q ss_pred ccCCCCCC--------------C-CChhHHH-------HHHHHHHHHHHhcCCCcE-EEEeCCCC----C-C---cchhh
Q 008330 212 LRNELRGP--------------K-QNVKDWY-------RYMQLGAEAVHAANPEVL-VILSGLNF----D-K---DLSFV 260 (570)
Q Consensus 212 L~NEP~~~--------------~-~~~~~W~-------~~~~~~~~aIr~~dp~~l-IiVeG~~w----~-~---dl~~~ 260 (570)
.+|||... . .+...-+ ....++++++|+..+..+ |++.. .| . . +....
T Consensus 205 t~NEp~~~~~~gy~~~~~G~~Pg~~~~~~~~~a~h~lllAHa~A~~~~r~~~~~~IGi~~~~-~~~~P~~~~~~~d~~aa 283 (473)
T 3apg_A 205 TMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAF-AWHDPLAEEYKDEVEEI 283 (473)
T ss_dssp EEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTSCCSEEEEEEEC-CEEEESSGGGHHHHHHH
T ss_pred EecCcchhhcccccccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeC-CeeecCCCCCHHHHHHH
Confidence 99999531 0 0111111 122577888999754433 22222 12 1 1 10000
Q ss_pred h------hccc--CcCCCCCEEEEEeecCCCCCC----------C--CC-----CCCC---------cchhhHHHHHHHH
Q 008330 261 R------NQAV--NLTFTGKLVFEAHWYGFTDGQ----------A--WV-----DGNP---------NQVCGRVVDNVMR 306 (570)
Q Consensus 261 ~------~~p~--~l~~~~nlVys~H~Y~~~~~~----------~--w~-----~~~~---------~~~~~~~~~~~~~ 306 (570)
. ..|+ . ..--.+.+++|...... . +. ..++ .-.+..+...+..
T Consensus 284 ~~~~~~~~dp~~d~---~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~GL~~~L~~ 360 (473)
T 3apg_A 284 RKKDYEFVTILHSK---GKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKY 360 (473)
T ss_dssp HHHHHHHHHHHHHT---TCCSCEEEECCCEEEEEESSSSEEECTTSGGGSCTTSBCTTSCBBCTTSCBCCHHHHHHHHHH
T ss_pred HHHhhhcCceeEec---CCCCeeEEcCccceEEecCCccccCCCCcccccccccccCCCCCcCCCCCcccHHHHHHHHHH
Confidence 0 0111 0 01123455555421100 0 00 0000 0013334333332
Q ss_pred HHHHHH-hcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHH---CCC---ceEEeccCceeecccCccCCCceeeeecC
Q 008330 307 LSGFLL-EQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAE---LDW---DWALWTLVGSYYLREGVIGLNEYYGLFDW 379 (570)
Q Consensus 307 ~~g~l~-~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~---~gi---gw~~W~~~G~y~~r~~~~~~~et~Gll~~ 379 (570)
+. +.+.||+|+|-|+... .+..+..|++..+..+.+ .|+ |++.|++-..|-.. .+....|||+.-
T Consensus 361 ----~~~rY~~Pi~ITENG~~~~-~D~~Ri~yl~~hl~~~~~Ai~dGv~V~GY~~WSl~Dn~EW~---~Gy~~RfGL~~V 432 (473)
T 3apg_A 361 ----LNNAYELPMIITENGMADA-ADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWA---QGFRMRFGLVYV 432 (473)
T ss_dssp ----HHHHHCCCEEEEECCCCCT-TCSSHHHHHHHHHHHHHHHHTTTCCEEEEEESCSBCCCCGG---GGGGSCCCSEEE
T ss_pred ----HHHHhCCeEEEEecCCCCC-CchHHHHHHHHHHHHHHHHHHcCCCEEEEEEecccccCccc---ccccCcCCeEEe
Confidence 22 2456999999998754 233467777776665443 454 79999986554322 335678999754
Q ss_pred CC
Q 008330 380 NW 381 (570)
Q Consensus 380 dw 381 (570)
|.
T Consensus 433 D~ 434 (473)
T 3apg_A 433 DF 434 (473)
T ss_dssp CT
T ss_pred cC
Confidence 43
|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.2e-09 Score=118.85 Aligned_cols=150 Identities=13% Similarity=0.105 Sum_probs=96.3
Q ss_pred CCCCCCCeEecCCeE-EcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccc
Q 008330 32 KPAIGLPLSTNSRWI-VDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASL 110 (570)
Q Consensus 32 ~~~~~~~L~t~G~~I-Vd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~ 110 (570)
++.+...+++++... .--+|+|+++.|++..... ...+-.++..+.||++|||+||+.+.|..+++.
T Consensus 35 ~~~~~p~~~i~~~~~~f~lnGkPf~i~gg~~H~~~-------~y~r~~~~~W~~mKa~G~NtVr~~V~W~~hEP~----- 102 (552)
T 3u7v_A 35 ADAAMPQLVTKDGRHALMVDGAPFLMLAAQVNNSS-------AWPSQMAKVWPAIEKVGANTVQVPIAWEQIEPV----- 102 (552)
T ss_dssp -CCCCCEEEEETTEEEEEETTEEECEEEEECCTTC-------CSGGGHHHHHHHHHHHTCSEEEEEEEHHHHCSB-----
T ss_pred ccccCCeEEEECCeEEEEECCEEEEEEEEEeCCCC-------CchhhhHHHHHHHHHhCCCEEEEEehhhccCCC-----
Confidence 344455666655543 2238999999999964221 122335777889999999999999987655431
Q ss_pred hhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecC--------CCCCCccccCC--------
Q 008330 111 TVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNH--------ISKPGWCCSNS-------- 174 (570)
Q Consensus 111 tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H--------~~~~~w~~~~~-------- 174 (570)
|...+ ++.+|++|+.|.++||+|||-+. ...|.|.....
T Consensus 103 ----------------------~G~yD---F~~LD~~ldla~e~GL~VIL~i~aeW~~ggta~~P~WL~~d~~~~P~vrt 157 (552)
T 3u7v_A 103 ----------------------EGQFD---FSYLDLLLEQARERKVRLVLLWFGTWKNSSPSYAPEWVKLDDKRFPRLIK 157 (552)
T ss_dssp ----------------------TTBCC---CHHHHHHHHHHHHTTCEEEEEEEEEEETTBCTTSCHHHHTCTTTSCEEEC
T ss_pred ----------------------CCccC---hhhHHHHHHHHHHCCCEEEEEeccccccCCCcCCCchhhcCcccCceeEC
Confidence 12222 34589999999999999999621 11355543110
Q ss_pred -CCCCCCCCCCCC-------HHHHHHHHHHHHHHhCCCCcEEEEeccCCCCC
Q 008330 175 -DGNGFFGDQYFN-------PDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218 (570)
Q Consensus 175 -dgng~~~d~~~~-------~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~ 218 (570)
+|.........+ .+.+.++.+.|++||++++.|+++.+=||+..
T Consensus 158 ~dG~~~~~~sp~~p~yl~a~r~~~~~l~~~La~r~~~~p~VI~wQIeNEyG~ 209 (552)
T 3u7v_A 158 DDGERSYSMSPLAKSTLDADRKAFVALMTHLKAKDAAQKTVIMVQVENETGT 209 (552)
T ss_dssp TTSCEEEEECTTCHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEEESCSB
T ss_pred CCCcEeecCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecccCCC
Confidence 110000000011 23445778889999999999999999999964
|
| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.8e-09 Score=111.16 Aligned_cols=236 Identities=13% Similarity=0.140 Sum_probs=146.3
Q ss_pred HHHHHHHHcCCcEEEe--cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 80 MLSKRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 80 ~~~~~i~~~GfN~VRl--Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
+....|.+.+||.|++ .+.|..+++. +... -+..+|++|+.|.++||.
T Consensus 28 ~~~~~~~~~~fn~vt~eN~~kW~~~ep~---------------------------~g~~---~f~~~D~~v~~a~~~gi~ 77 (313)
T 1v0l_A 28 STYTSIAGREFNMVTAENEMKIDATEPQ---------------------------RGQF---NFSSADRVYNWAVQNGKQ 77 (313)
T ss_dssp HHHHHHHHHHCSEEEESSTTSHHHHCSB---------------------------TTBC---CCHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhcCCEEEECCcccHHHhCCC---------------------------CCcc---CchHHHHHHHHHHHCCCE
Confidence 3456677789999999 5777655431 1111 236789999999999999
Q ss_pred EEE---ecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCC---hhHH-----
Q 008330 158 VIL---DNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQN---VKDW----- 226 (570)
Q Consensus 158 VIL---D~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~---~~~W----- 226 (570)
|.. -.|...|.|.... +...-.+.+.++.+.|++|||+. |..+|+.|||....++ ...|
T Consensus 78 v~ghtlvW~~q~P~W~~~~--------~~~~~~~~~~~~i~~v~~ry~g~--i~~wdv~NE~~~~~g~~~~~~~~~~~~G 147 (313)
T 1v0l_A 78 VRGHTLAWHSQQPGWMQSL--------SGSALRQAMIDHINGVMAHYKGK--IVQWDVVNEAFADGSSGARRDSNLQRSG 147 (313)
T ss_dssp EEEEEEECSSSCCHHHHTC--------CHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEECCBCSSSSCCBCCSHHHHTC
T ss_pred EEEEeecCcCcCchhhhcC--------CHHHHHHHHHHHHHHHHHHcCCc--ceEEeeecccccCCCcccccCcHHHhhh
Confidence 964 3476667664321 00011356677888999999986 8889999999653211 1123
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeCCCCCC-c-------chhhh---hcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcc
Q 008330 227 YRYMQLGAEAVHAANPEVLVILSGLNFDK-D-------LSFVR---NQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQ 295 (570)
Q Consensus 227 ~~~~~~~~~aIr~~dp~~lIiVeG~~w~~-d-------l~~~~---~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~ 295 (570)
..++..+.++.|+++|+..+++.+.+-.. . +..+. ... .++ +-+=+..|+.....
T Consensus 148 ~~~i~~af~~Ar~~dP~a~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G--~~i-DgIG~Q~H~~~~~~----------- 213 (313)
T 1v0l_A 148 NDWIEVAFRTARAADPSAKLCYNDYNVENWTWAKTQAMYNMVRDFKQRG--VPI-DCVGFQSHFNSGSP----------- 213 (313)
T ss_dssp TTHHHHHHHHHHHHCTTSEEEEEESSCCSTTSHHHHHHHHHHHHHHHHT--CCC-CEEEECCEEBTTBC-----------
T ss_pred HHHHHHHHHHHHhhCCCCEEEEeccccccCChHHHHHHHHHHHHHHHCC--CCc-ceEEEeEEccCCCC-----------
Confidence 24678899999999999999996543211 0 11111 111 111 33444457643111
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCC--CceEEeccCceeecccCccCCCce
Q 008330 296 VCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELD--WDWALWTLVGSYYLREGVIGLNEY 373 (570)
Q Consensus 296 ~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~g--igw~~W~~~G~y~~r~~~~~~~et 373 (570)
..+.+.+.+++ +.+.|+||.|+|+++... ...+++.++..+.++. .|-++|.+...+-.+. ++.
T Consensus 214 ~~~~~~~~l~~----~a~~G~pv~iTEldi~~~-----qa~~y~~~~~~~~~~~~v~git~Wg~~D~~sW~~-----~~~ 279 (313)
T 1v0l_A 214 YNSNFRTTLQN----FAALGVDVAITELDIQGA-----PASTYANVTNDCLAVSRCLGITVWGVRDSDSWRS-----EQT 279 (313)
T ss_dssp CCTTHHHHHHH----HHTTTCEEEEEEEEETTC-----CHHHHHHHHHHHHTCTTEEEEEESCSBGGGSTTG-----GGC
T ss_pred CHHHHHHHHHH----HHhcCCeEEEEeCCccHH-----HHHHHHHHHHHHHhcCCceEEEEECCCCCCCccC-----CCC
Confidence 01234445543 235799999999999822 3566777777777664 5778998764332222 233
Q ss_pred eeeecCCCCC
Q 008330 374 YGLFDWNWCD 383 (570)
Q Consensus 374 ~Gll~~dw~~ 383 (570)
.+|++.|+..
T Consensus 280 ~~L~d~d~~p 289 (313)
T 1v0l_A 280 PLLFNNDGSK 289 (313)
T ss_dssp CSSBCTTSCB
T ss_pred ceeECCCCCC
Confidence 4788888753
|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
|---|
Probab=99.00 E-value=4e-09 Score=108.21 Aligned_cols=229 Identities=14% Similarity=0.179 Sum_probs=141.1
Q ss_pred HHcCCcEEEe--cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEe--
Q 008330 86 VDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILD-- 161 (570)
Q Consensus 86 ~~~GfN~VRl--Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD-- 161 (570)
.+.+||.|++ .+.|..+++. |...+ +..+|++|+.|.++||.|...
T Consensus 36 ~~~~fn~vt~en~~kW~~~ep~---------------------------~g~~~---f~~~D~~v~~a~~~gi~v~ghtl 85 (303)
T 1i1w_A 36 IQANFGQVTPENSMKWDATEPS---------------------------QGNFN---FAGADYLVNWAQQNGKLIRGHTL 85 (303)
T ss_dssp HHHHCSEEEESSTTSHHHHCSB---------------------------TTBCC---CHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHhhCCEEEECccccHHHhCCC---------------------------CCccC---hhhHHHHHHHHHHCCCEEEEeec
Confidence 3779999998 6777655431 11122 467999999999999999743
Q ss_pred -cCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCC--hhHHH-----HHHHHH
Q 008330 162 -NHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQN--VKDWY-----RYMQLG 233 (570)
Q Consensus 162 -~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~--~~~W~-----~~~~~~ 233 (570)
.|...|.|..... +...-.+.+.++.+.|++||++. |.++|+.|||....+. ...|+ .++.++
T Consensus 86 ~W~~q~P~W~~~~~-------~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NE~~~~~g~~r~s~~~~~~g~~~i~~a 156 (303)
T 1i1w_A 86 VWHSQLPSWVSSIT-------DKNTLTNVMKNHITTLMTRYKGK--IRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIA 156 (303)
T ss_dssp ECSTTCCHHHHTCC-------CHHHHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHH
T ss_pred cccCCCChHHhcCC-------CHHHHHHHHHHHHHHHHHhcCCc--eeEEEeecCccCCCCCcccchHHHhcCHHHHHHH
Confidence 3666677743210 11001356678888999999986 8899999999643211 12454 357889
Q ss_pred HHHHHhcCCCcEEEEeCCCC-CCc-------chhhh---hcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHH
Q 008330 234 AEAVHAANPEVLVILSGLNF-DKD-------LSFVR---NQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVD 302 (570)
Q Consensus 234 ~~aIr~~dp~~lIiVeG~~w-~~d-------l~~~~---~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~ 302 (570)
.+++|+++|+..+++...+- ..+ +..+. ...+ +. +-+-+..|+... ..+.+.+
T Consensus 157 f~~Ar~~dP~a~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~--~i-DgiG~Q~H~~~~-------------~~~~~~~ 220 (303)
T 1i1w_A 157 FQTARAADPNAKLYINDYNLDSASYPKTQAIVNRVKKWRAAGV--PI-DGIGSQTHLSAG-------------QGASVLQ 220 (303)
T ss_dssp HHHHHHHCTTSEEEEEESSCCCSSSHHHHHHHHHHHHHHHTTC--CC-CEEEECCEECTT-------------THHHHHH
T ss_pred HHHHHHHCCCCeEEeccccccCCChHHHHHHHHHHHHHHHCCC--cc-cEEEeccccCCC-------------CHHHHHH
Confidence 99999999999999875431 111 00111 1111 11 233334465431 1134444
Q ss_pred HHHHHHHHHHhcCC-CeEEeccccCCCCCCcchHHHHHHHHHHHHHCC--CceEEeccCceeecccCccCCCceeeeecC
Q 008330 303 NVMRLSGFLLEQGW-PLFVSEFGADLRGNNVNDNRYLNCFFGVAAELD--WDWALWTLVGSYYLREGVIGLNEYYGLFDW 379 (570)
Q Consensus 303 ~~~~~~g~l~~~g~-Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~g--igw~~W~~~G~y~~r~~~~~~~et~Gll~~ 379 (570)
.+++ +.+.|+ ||+|+|+++... ...+++.++..+.++. .|-++|.+...+-.+. ++..+|++.
T Consensus 221 ~l~~----~a~~G~~pi~iTEldi~~~-----qa~~y~~~~~~~~~~~~v~git~Wg~~D~~sW~~-----~~~~~L~d~ 286 (303)
T 1i1w_A 221 ALPL----LASAGTPEVAITELDVAGA-----SSTDYVNVVNACLNVSSCVGITVWGVADPDSWRA-----STTPLLFDG 286 (303)
T ss_dssp HHHH----HHTTCCSEEEEEEEEETTC-----CHHHHHHHHHHHHHCTTEEEEEESCSBGGGSTTG-----GGCCSSBCT
T ss_pred HHHH----HHHCCCCeEEEEeCCccch-----HHHHHHHHHHHHHhCCCceEEEEEcCCCCCCcCC-----CCcceeECC
Confidence 4443 345789 999999999832 2445667777766654 5778998764332222 234678888
Q ss_pred CCCC
Q 008330 380 NWCD 383 (570)
Q Consensus 380 dw~~ 383 (570)
|+..
T Consensus 287 ~~~p 290 (303)
T 1i1w_A 287 NFNP 290 (303)
T ss_dssp TSCB
T ss_pred CCCC
Confidence 7653
|
| >1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=98.97 E-value=2.4e-08 Score=108.03 Aligned_cols=283 Identities=12% Similarity=0.100 Sum_probs=157.9
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCcccc--chhhhhhhhccchhhccCcc---cCC-------CCCCCchHHHHHH
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLAS--LTVRQSFQKLGLLEAIGGIQ---SNN-------PSIVDLPLIKAFQ 145 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n--~tv~~s~~~lg~~~~~~g~~---~~n-------P~~~~~t~l~~ld 145 (570)
.+++++.|+++|+|++|+.++|..+.++.-.. .+|+- + ..|.. ..| -.+.++..++.++
T Consensus 62 y~eDi~lm~~~G~~~~R~sisWsRi~P~~g~~~~~~v~~--~-------~~~~~~~~~~n~~~~~~l~~~~n~~g~~~Y~ 132 (481)
T 1qvb_A 62 NQNDHDLAEKLGVNTIRVGVEWSRIFPKPTFNVKVPVER--D-------ENGSIVHVDVDDKAVERLDELANKEAVNHYV 132 (481)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHCSSCCTTSCCCEEE--C-------TTSCEEEECCCHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccEeccchhhhCCCCCCCccccccc--c-------ccccccccccccccchhhhhhhcHHHHHHHH
Confidence 58899999999999999999998776531000 00000 0 00000 000 0012367899999
Q ss_pred HHHHHHhcCCCEEEEecCC-CCCCccccCC---------CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCC
Q 008330 146 AVVASLGNNNVMVILDNHI-SKPGWCCSNS---------DGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNE 215 (570)
Q Consensus 146 ~vV~~a~~~Gl~VILD~H~-~~~~w~~~~~---------dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NE 215 (570)
++|+.+.++||.+||.+++ +.|.|..... ...+|.+.. ..+.|.++-+.+++||++. |..+-.+||
T Consensus 133 ~~id~l~~~Gi~p~vtL~H~~lP~~L~~~~~~~~~~~~~~~gGw~n~~--~~~~F~~ya~~~~~~~gd~--V~~W~t~NE 208 (481)
T 1qvb_A 133 EMYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEE--SVVEFAKYAAYIAWKMGEL--PVMWSTMNE 208 (481)
T ss_dssp HHHHHHHTTTCEEEEESCCSCCBTTTBCHHHHHHHCGGGSCBGGGSTH--HHHHHHHHHHHHHHHHTTS--CSEEEEEEC
T ss_pred HHHHHHHHCCCEEEEEeCCCCCCHHHHhcCCcccccccccCCCcCCch--HHHHHHHHHHHHHHHhCCC--ccEEEEecc
Confidence 9999999999999999855 5677753210 002444332 4688999999999999987 778999999
Q ss_pred CCCC--------------C-CChhHHH-------HHHHHHHHHHHhcCCCcEEEEeCCCC----CCcc------------
Q 008330 216 LRGP--------------K-QNVKDWY-------RYMQLGAEAVHAANPEVLVILSGLNF----DKDL------------ 257 (570)
Q Consensus 216 P~~~--------------~-~~~~~W~-------~~~~~~~~aIr~~dp~~lIiVeG~~w----~~dl------------ 257 (570)
|... . .+...-+ ....++++++|+.+|+.+-++-...| ..+.
T Consensus 209 p~~~~~~gy~~~~~G~~Pg~~~~~~~~~a~h~~llAHa~A~~~~r~~~~~~IGi~~~~~~~~P~~~d~~aa~~~~~~~~~ 288 (481)
T 1qvb_A 209 PNVVYEQGYMFVKGGFPPGYLSLEAADKARRNMIQAHARAYDNIKRFSKKPVGLIYAFQWFELLEGPAEVFDKFKSSKLY 288 (481)
T ss_dssp HHHHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEECCEEECSSSCCSHHHHHHHHHTS
T ss_pred cchhhcccccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCcEEEEeeCCeeecCCCCHHHHHHHHHHHhh
Confidence 9531 0 0111111 12256788999999873322211111 1111
Q ss_pred ---hhh--hhccc----C--cCCCCCEEEEEeecCCCCC----------CCC-----C--CCCC---------cchhhHH
Q 008330 258 ---SFV--RNQAV----N--LTFTGKLVFEAHWYGFTDG----------QAW-----V--DGNP---------NQVCGRV 300 (570)
Q Consensus 258 ---~~~--~~~p~----~--l~~~~nlVys~H~Y~~~~~----------~~w-----~--~~~~---------~~~~~~~ 300 (570)
..+ +..|. + +. ..--.+.+++|..... ... . ..++ .-.+..+
T Consensus 289 ~fld~~~~G~yp~~~~~~~~~~-~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~GL 367 (481)
T 1qvb_A 289 YFTDIVSKGSSIINVEYRRDLA-NRLDWLGVNYYSRLVYKIVDDKPIILHGYGFLCTPGGISPAENPCSDFGWEVYPEGL 367 (481)
T ss_dssp TTTTHHHHSCCSSCCCCCTTTS-SCCSEEEEECCCEEEEECCTTCCEECTTSGGGSCTTCBCTTSCBBCTTCCBCCTHHH
T ss_pred hhhHHHhCCCCCCCCCCCHHHc-CCCceEEEecccceEEeccCcccccCCccccccccccccCCCCCcCCCCCccchHHH
Confidence 111 00110 0 00 1124567777753210 000 0 0000 0023334
Q ss_pred HHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHH---HCCC---ceEEeccCceeecccCccCCCcee
Q 008330 301 VDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAA---ELDW---DWALWTLVGSYYLREGVIGLNEYY 374 (570)
Q Consensus 301 ~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~---~~gi---gw~~W~~~G~y~~r~~~~~~~et~ 374 (570)
...+.... .+.+.||+|+|-|+.... +..+..|++..+..+. +.|+ |+++|++-..|-.. .+....|
T Consensus 368 ~~~L~~~~---~rY~~Pi~ITENG~~~~~-D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dn~EW~---~Gy~~Rf 440 (481)
T 1qvb_A 368 YLLLKELY---NRYGVDLIVTENGVSDSR-DALRPAYLVSHVYSVWKAANEGIPVKGYLHWSLTDNYEWA---QGFRQKF 440 (481)
T ss_dssp HHHHHHHH---HHHCCEEEEEECCCCCTT-CSSHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCCCGG---GTTSSCC
T ss_pred HHHHHHHH---HHhCCCEEEEeCCCCccc-cHHHHHHHHHHHHHHHHHHHcCCCEEEEEecccccccccc---CCCCCCc
Confidence 43333211 125689999999987543 3346777777665433 3464 79999986554332 3456789
Q ss_pred eeecCCC
Q 008330 375 GLFDWNW 381 (570)
Q Consensus 375 Gll~~dw 381 (570)
||+.=|.
T Consensus 441 GLv~VD~ 447 (481)
T 1qvb_A 441 GLVMVDF 447 (481)
T ss_dssp CSEEEET
T ss_pred eEEEEeC
Confidence 9975443
|
| >2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.6e-09 Score=117.52 Aligned_cols=138 Identities=15% Similarity=0.166 Sum_probs=99.0
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|||++|++++|..+.++ | .+.-.+...++.++++|+++.++||.
T Consensus 73 ~~eDi~lm~~~G~~~~R~sisW~Ri~P~---------------------G----~~g~~n~~gl~~yd~lid~l~~~GI~ 127 (479)
T 2xhy_A 73 YKEDIKLFAEMGFKCFRTSIAWTRIFPK---------------------G----DEAQPNEEGLKFYDDMFDELLKYNIE 127 (479)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSSS---------------------S----CCSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHcCCCEEEeeCCHHHhCCC---------------------C----CCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 5889999999999999999999766542 0 01224567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCC----C-C---------
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPK----Q-N--------- 222 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~----~-~--------- 222 (570)
+||++|+.. |.|.... -.+ |.++ ...+.|.++|+.+++||++. |-.+.++|||.... . .
T Consensus 128 pivtL~H~d~P~~l~~~--~gg-w~~~-~~~~~F~~ya~~~~~~~gd~--V~~w~t~NEp~~~~~~~~gy~~~~~~G~~~ 201 (479)
T 2xhy_A 128 PVITLSHFEMPLHLVQQ--YGS-WTNR-KVVDFFVRFAEVVFERYKHK--VKYWMTFNEINNQRNWRAPLFGYCCSGVVY 201 (479)
T ss_dssp EEEEEESSCCBHHHHHH--SCG-GGST-HHHHHHHHHHHHHHHHTTTT--CCEEEEETTTTGGGSTTSTTHHHHHHSCCG
T ss_pred EEEEcCCCCCCHHHHhh--cCC-CCCH-HHHHHHHHHHHHHHHHhCCC--CCcEEEecCcchhhhccccccccccccccC
Confidence 999998743 4443210 113 3333 24789999999999999995 55789999997531 0 0
Q ss_pred ------hhH-H------HHHHHHHHHHHHhcCCCcEE
Q 008330 223 ------VKD-W------YRYMQLGAEAVHAANPEVLV 246 (570)
Q Consensus 223 ------~~~-W------~~~~~~~~~aIr~~dp~~lI 246 (570)
... + .....++++++|+++|+..|
T Consensus 202 Pg~~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~I 238 (479)
T 2xhy_A 202 TEHENPEETMYQVLHHQFVASALAVKAARRINPEMKV 238 (479)
T ss_dssp GGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred CCccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 001 1 11224778899999998655
|
| >3a07_A Actinohivin; carbohydrate-binding module family 13, antiviral protein, LE; 1.19A {Actinomycete} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.5e-09 Score=95.50 Aligned_cols=100 Identities=16% Similarity=0.218 Sum_probs=79.7
Q ss_pred cceeeCCCCceeeeecCCCCceecCCCCCC--CCccccCCcceeecccceEEeeccCCccceeccccC-CCCCceeEeec
Q 008330 411 HKVIYHPATGLCVQRKSFLDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKHVGKPAKLGIICT-DCGSTWEIISD 487 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~~g~~~~~~~~c~-~~~~~W~~~s~ 487 (570)
.+.+....+|+|+++.+. .++.+++|.++ ++|.+++.+.|+...+++||++.+.+ ++.+ +.|. +++|+|++..+
T Consensus 6 ~~~i~n~~sg~CLd~~~~-~~v~~~~C~g~~~Q~W~~~~~g~i~~~~sg~CLd~~~~~-~v~~-~~C~g~~~Q~W~~~~~ 82 (118)
T 3a07_A 6 SVTIRNAQTGRLLDSNYN-GNVYTLPANGGNYQRWTGPGDGTVRNAQTGRCLDSNYDG-AVYT-LPCNGGSYQKWLFYSN 82 (118)
T ss_dssp EECEEETTTCCEEEECTT-CCEEEECCCCCGGGCEEECSSSCCEETTTCCEEEECTTC-BEEE-ECCCCCGGGCEEECTT
T ss_pred eEEEEECCCCcEEecCCC-CeEEEECCCCCccCEEEECCCEEEEECCCCcEEecCCCC-eEEE-EccCCCccceEEEeCC
Confidence 456788999999999665 34889999875 79999998888877789999998876 4444 8998 77899999777
Q ss_pred cccEEEEecCCCceEEEeecCCCceeeccee
Q 008330 488 SKMHLSSKADNGTTVCLDVDSSNTIVTNTCK 518 (570)
Q Consensus 488 ~~~~~~~~~~~~~~~cld~~~~~~~~~~~c~ 518 (570)
+. |.. ..+.+|||+.++++|+.+.|.
T Consensus 83 g~--i~~---~~sg~cLdv~~~~~v~~~~c~ 108 (118)
T 3a07_A 83 GY--IQN---VETGRVLDSNYNGNVYTLPAN 108 (118)
T ss_dssp SC--EEE---TTTCCEEEECTTCCEEEECCC
T ss_pred CE--EEE---CCCCcEEEcCCCCEEEEEcCC
Confidence 64 332 257899999877778888874
|
| >4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=2.7e-08 Score=106.78 Aligned_cols=133 Identities=11% Similarity=0.121 Sum_probs=96.8
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++. ....+...++.++++|+.+.++||.
T Consensus 60 y~eDi~l~~~lG~~~~R~si~W~Ri~P~g--------------------------~g~~N~~gl~~Y~~lid~l~~~GI~ 113 (444)
T 4hz8_A 60 YEQDLDLMRQLGLKTYRFSIAWARIQPDS--------------------------SRQINQRGLDFYRRLVEGLHKRDIL 113 (444)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSCST--------------------------TCCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhcCCCEEEEeccHHHcCcCC--------------------------CCCcCHHHHHHHHHHHHHHHHcCCE
Confidence 58999999999999999999997765420 0123567899999999999999999
Q ss_pred EEEecCCC-CCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCC------------C-CCh
Q 008330 158 VILDNHIS-KPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP------------K-QNV 223 (570)
Q Consensus 158 VILD~H~~-~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~------------~-~~~ 223 (570)
+|+++|+. -|.|.... .||.+.. ..+.|.++.+.+++||++. |--+-.+|||... . .+.
T Consensus 114 p~vtL~H~dlP~~L~~~---GGW~nr~--~v~~F~~Ya~~~~~~~gdr--Vk~W~T~NEp~~~~~~gy~~g~~~Pg~~~~ 186 (444)
T 4hz8_A 114 PMATLYHWDLPQWVEDE---GGWLSRE--SASRFAEYTHALVAALGDQ--IPLWVTHNEPMVTVWAGYHMGLFAPGLKDP 186 (444)
T ss_dssp EEEEEESSCCBHHHHHT---TGGGSTH--HHHHHHHHHHHHHHHHGGG--CSEEEEEECHHHHHHHHHTSCSSTTCCCCG
T ss_pred EEEEeCCCCCCHHHhhC---cCCCChH--HHHHHHHHHHHHHHHhCcc--CCeEEEccCcchhhhccccccccccccCCH
Confidence 99999774 35553321 2444332 3789999999999999986 4457799999631 0 111
Q ss_pred hHH-------HHHHHHHHHHHHhcCCC
Q 008330 224 KDW-------YRYMQLGAEAVHAANPE 243 (570)
Q Consensus 224 ~~W-------~~~~~~~~~aIr~~dp~ 243 (570)
..- .....++++++|+..|+
T Consensus 187 ~~~~~~~h~~llAha~Av~~~r~~~~~ 213 (444)
T 4hz8_A 187 TLGGRVAHHLLLSHGQALQAFRALSPA 213 (444)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 221 12335778889999988
|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=9.3e-09 Score=116.42 Aligned_cols=151 Identities=15% Similarity=0.168 Sum_probs=100.4
Q ss_pred EEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecc-cccccccCccccchhhhhhhhccchhhccCcccCCC
Q 008330 55 KLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTW-PLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNP 133 (570)
Q Consensus 55 ~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi-~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP 133 (570)
.+.|+++. |+-+.....+++++.||++|+|+||+.+ +|..+.+. |
T Consensus 9 ~~~G~~y~-------pe~w~~~~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~---------------------------~ 54 (675)
T 3tty_A 9 IWYGGDYN-------PEQWDKATMEEDMRMFNLAGIDVATVNVFSWAKIQRD---------------------------E 54 (675)
T ss_dssp CEEEEECC-------GGGSCHHHHHHHHHHHHHHTCCEEEECSSCHHHHBSS---------------------------S
T ss_pred ceEeeeCC-------hhhCCHHHHHHHHHHHHHcCCCEEEEeeechhhhCCc---------------------------C
Confidence 46677753 3433333478999999999999999986 77655431 1
Q ss_pred CCCCchHHHHHHHHHHHHhcCCCEEEEecCCC-CCCccc--------cCCCCC-CCCCCCC----CC---HHHHHHHHHH
Q 008330 134 SIVDLPLIKAFQAVVASLGNNNVMVILDNHIS-KPGWCC--------SNSDGN-GFFGDQY----FN---PDLWIKGLTK 196 (570)
Q Consensus 134 ~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~-~~~w~~--------~~~dgn-g~~~d~~----~~---~~~~~~~w~~ 196 (570)
...+ ++.||++|+.|.++||+|||..+.. .|.|.. -..+|. ..|+.+. .+ .+.+.++++.
T Consensus 55 g~~~---f~~ld~~i~~~~~~Gi~vil~~~~~~~P~Wl~~~~Pe~l~~d~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~ 131 (675)
T 3tty_A 55 VSYD---FTWLDDIIERLTKENIYLCLATSTGAHPAWMAKKYPDVLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGK 131 (675)
T ss_dssp SCBC---CHHHHHHHHHHHHTTCEEEEECCTTSCCHHHHHHCGGGBCBCTTSCBCCSCSSSCBCTTCHHHHHHHHHHHHH
T ss_pred CccC---HHHHHHHHHHHHHCCCEEEEeCCCCCCChhhhhcCCceeeecCCCcCcccCCccCCCCCCHHHHHHHHHHHHH
Confidence 1122 4679999999999999999998653 344421 111221 0122221 11 4567788999
Q ss_pred HHHHhCCCCcEEEEeccCCCCCCCC---ChhHHHHHHHHHHHHHHhcCC
Q 008330 197 MATIFNGVRNVVGMSLRNELRGPKQ---NVKDWYRYMQLGAEAVHAANP 242 (570)
Q Consensus 197 iA~ryk~~p~Vig~dL~NEP~~~~~---~~~~W~~~~~~~~~aIr~~dp 242 (570)
|++||+++|.|+++++.|||..... ....+.+++++-+..|.+.|+
T Consensus 132 l~~ry~~~p~Vi~w~v~NE~g~~~y~~~~~~~Fr~wLk~kY~ti~~LN~ 180 (675)
T 3tty_A 132 LAERYKDHPQIVMWHVSNEYGGYCYCDNCEKQFRVWLKERYGTLEALNK 180 (675)
T ss_dssp HHHHTTTCTTEEEEECSSSCCCCCCSHHHHHHHHHHHHHHHSSHHHHHH
T ss_pred HHHHhCCCCcEEEEEEccccCCCcCCHHHHHHHHHHHHHHhcCHHHHHH
Confidence 9999999999999999999986422 234566666666555655444
|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
Probab=98.88 E-value=3.9e-08 Score=103.74 Aligned_cols=231 Identities=12% Similarity=0.227 Sum_probs=140.9
Q ss_pred HHHHHHHHcCCcEEEe--cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 80 MLSKRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 80 ~~~~~i~~~GfN~VRl--Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
+..+.| +.+||.|++ .+.|..+++. |... -+..+|++|+.|.++||.
T Consensus 43 ~~~~l~-~~~fn~vt~eNe~kW~~~ep~---------------------------~G~~---~f~~~D~~v~~a~~~gi~ 91 (379)
T 1r85_A 43 KDVQML-KRHFNSIVAENVMKPISIQPE---------------------------EGKF---NFEQADRIVKFAKANGMD 91 (379)
T ss_dssp HHHHHH-HHHCSEEEESSTTSHHHHCSB---------------------------TTBC---CCHHHHHHHHHHHHTTCE
T ss_pred HHHHHH-HhhCCeEEECCcccHHHhcCC---------------------------CCcc---CchhHHHHHHHHHHCCCE
Confidence 444555 669999999 5777655431 1111 246799999999999999
Q ss_pred EEEec---CCCCCCccccCCCCCC-CCCCC----CCC----HHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCC--Ch
Q 008330 158 VILDN---HISKPGWCCSNSDGNG-FFGDQ----YFN----PDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQ--NV 223 (570)
Q Consensus 158 VILD~---H~~~~~w~~~~~dgng-~~~d~----~~~----~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~--~~ 223 (570)
|+... |...|.|.....+|.. .++.. ..+ .+.+.++.+.|++||++ .|..+|+.|||....+ ..
T Consensus 92 vrghtlvW~~q~P~W~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~g--~i~~wdV~NE~~~~~g~~r~ 169 (379)
T 1r85_A 92 IRFHTLVWHSQVPQWFFLDKEGKPMVNETDPVKREQNKQLLLKRLETHIKTIVERYKD--DIKYWDVVNEVVGDDGKLRN 169 (379)
T ss_dssp EEEECSCCSTTCCGGGGBCTTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCTTSSBCC
T ss_pred EEEecccccccCchhhhcCcCCccccccccccccCCCHHHHHHHHHHHHHHHHHHhCC--CceEEEeecccccCCCCccC
Confidence 98764 7667888753222210 01100 011 24566788899999999 6889999999965321 11
Q ss_pred hHHH-----HHHHHHHHHHHh-cCCCcEEEEeCCCCCCc------chh---hhhcccCcCCCCCEEEEEeecCCCCCCCC
Q 008330 224 KDWY-----RYMQLGAEAVHA-ANPEVLVILSGLNFDKD------LSF---VRNQAVNLTFTGKLVFEAHWYGFTDGQAW 288 (570)
Q Consensus 224 ~~W~-----~~~~~~~~aIr~-~dp~~lIiVeG~~w~~d------l~~---~~~~p~~l~~~~nlVys~H~Y~~~~~~~w 288 (570)
..|+ .++..+.++.|+ ++|+..+++...+-... +.. +....+ ++ +-+=+..|+-.. +
T Consensus 170 s~~~~~lG~~~i~~af~~Ar~~adP~a~L~~NDyn~~~~~k~~~~~~~v~~l~~~g~--pi-DgIG~Q~H~~~~-----~ 241 (379)
T 1r85_A 170 SPWYQIAGIDYIKVAFQAARKYGGDNIKLYMNDYNTEVEPKRTALYNLVKQLKEEGV--PI-DGIGHQSHIQIG-----W 241 (379)
T ss_dssp CHHHHHHTTHHHHHHHHHHHHHHCTTSEEEEEESCTTSTTHHHHHHHHHHHHHHTTC--CC-CEEEECCEECSS-----S
T ss_pred chHHHhhhHHHHHHHHHHHHhhCCCCCEEEecccccccchhHHHHHHHHHHHHHCCC--ce-eEEEEeEEecCC-----C
Confidence 3454 577889999999 99999999965431110 011 111111 11 233333465210 0
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC---------------cchHHHHHHHHHHHHHCC--Cc
Q 008330 289 VDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN---------------VNDNRYLNCFFGVAAELD--WD 351 (570)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~---------------~~~~~~~~~~~~~~~~~g--ig 351 (570)
+ ..+.+.+.+++ +.+.|+||.|+|+++...... .....+++.++..+.++. ++
T Consensus 242 ----p--~~~~~~~~l~~----~a~lGlpI~iTElDi~~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~V~ 311 (379)
T 1r85_A 242 ----P--SEAEIEKTINM----FAALGLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKLSDKIS 311 (379)
T ss_dssp ----S--CHHHHHHHHHH----HHHTTCEEEEEEEEECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEE
T ss_pred ----C--CHHHHHHHHHH----HHhcCCeEEEeeccccCCCcccccccccCCCCHHHHHHHHHHHHHHHHHHHhCcCcee
Confidence 1 12445555543 345789999999999764311 123577788888887764 55
Q ss_pred -eEEeccCcee
Q 008330 352 -WALWTLVGSY 361 (570)
Q Consensus 352 -w~~W~~~G~y 361 (570)
-++|.+...|
T Consensus 312 git~WG~~D~~ 322 (379)
T 1r85_A 312 NVTFWGIADNH 322 (379)
T ss_dssp EEEESSSSTTS
T ss_pred EEEEeCCcCCC
Confidence 7889877444
|
| >1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=98.88 E-value=6.2e-09 Score=112.03 Aligned_cols=139 Identities=12% Similarity=0.038 Sum_probs=101.9
Q ss_pred hHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 77 PMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
..+++++.|+++|+|++|+.++|..+.++ | +.-.+...++.++++|+++.++||
T Consensus 59 ~~~eDi~lm~~~G~~~~R~si~W~ri~P~---------------------G-----~g~~n~~Gl~~y~~~id~l~~~gI 112 (449)
T 1qox_A 59 RVEEDVQLLKDLGVKVYRFSISWPRVLPQ---------------------G-----TGEVNRAGLDYYHRLVDELLANGI 112 (449)
T ss_dssp CHHHHHHHHHHHTCSEEEEECCHHHHSTT---------------------S-----SSSCCHHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHhcCCCeEEecCcHHHhCcC---------------------C-----CCCcCHHHHHHHHHHHHHHHHcCC
Confidence 36899999999999999999999766542 0 223456789999999999999999
Q ss_pred EEEEecCC-CCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCC------------CC-CC
Q 008330 157 MVILDNHI-SKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG------------PK-QN 222 (570)
Q Consensus 157 ~VILD~H~-~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~------------~~-~~ 222 (570)
.+||++|+ +.|.|.... .+|. ++ ...+.|.++++.+++||++. |..+.++|||.. +. .+
T Consensus 113 ~p~vtL~h~d~P~~l~~~---ggw~-~r-~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~ 185 (449)
T 1qox_A 113 EPFCTLYHWDLPQALQDQ---GGWG-SR-ITIDAFAEYAELMFKELGGK--IKQWITFNEPWCMAFLSNYLGVHAPGNKD 185 (449)
T ss_dssp EEEEEEESSCCBHHHHTT---TGGG-ST-HHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCC
T ss_pred eEEEEeCCCcccHHHHhc---CCCC-Cc-hHHHHHHHHHHHHHHHhCCC--CceEEEccCCcceeccccccCccCCCccc
Confidence 99999965 455554321 2443 33 24789999999999999998 778999999963 11 11
Q ss_pred hhHHH-------HHHHHHHHHHHhcCCCcEEEE
Q 008330 223 VKDWY-------RYMQLGAEAVHAANPEVLVIL 248 (570)
Q Consensus 223 ~~~W~-------~~~~~~~~aIr~~dp~~lIiV 248 (570)
...-+ ....++++++|+++|+.-|-+
T Consensus 186 ~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi 218 (449)
T 1qox_A 186 LQLAIDVSHHLLVAHGRAVTLFRELGISGEIGI 218 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 12221 223578899999999864443
|
| >1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=6.2e-09 Score=111.95 Aligned_cols=138 Identities=13% Similarity=0.093 Sum_probs=101.5
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++ | +.-.++..++.++++|+++.++||.
T Consensus 60 y~eDi~lm~~~G~~~~R~si~W~Ri~P~---------------------G-----~g~~n~~Gl~~y~~lid~l~~~GI~ 113 (447)
T 1e4i_A 60 YEEDIRLMKELGIRTYRFSVSWPRIFPN---------------------G-----DGEVNQKGLDYYHRVVDLLNDNGIE 113 (447)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSTT---------------------S-----SSCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred cHHHHHHHHHcCCCeEEecCcHHHhccC---------------------C-----CCCcCHHHHHHHHHHHHHHHHcCCE
Confidence 6899999999999999999999766542 0 2234677899999999999999999
Q ss_pred EEEecCC-CCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCC------------C-CCh
Q 008330 158 VILDNHI-SKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP------------K-QNV 223 (570)
Q Consensus 158 VILD~H~-~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~------------~-~~~ 223 (570)
+||++|+ ..|.|... ..+| .++ ...+.|.++++.+++||++. |..+.++|||... . .+.
T Consensus 114 p~vtL~H~d~P~~l~~---~ggw-~~r-~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 186 (447)
T 1e4i_A 114 PFCTLYHWDLPQALQD---AGGW-GNR-RTIQAFVQFAETMFREFHGK--IQHWLTFNEPWCIAFLSNMLGVHAPGLTNL 186 (447)
T ss_dssp EEEEEESSCCBHHHHH---TTTT-SST-HHHHHHHHHHHHHHHHTBTT--BCEEEEEECHHHHHHHHHTSCCSTTCCCCH
T ss_pred EEEEeCCCcccHHHHh---cCCC-CCc-hhHHHHHHHHHHHHHHhCCc--ceeEEEecCccccccccccccccCCCccch
Confidence 9999865 44555422 1244 333 24789999999999999998 7789999999631 1 111
Q ss_pred hHH-------HHHHHHHHHHHHhcCCCcEEEE
Q 008330 224 KDW-------YRYMQLGAEAVHAANPEVLVIL 248 (570)
Q Consensus 224 ~~W-------~~~~~~~~~aIr~~dp~~lIiV 248 (570)
..- .....++++++|+++|+.-|-+
T Consensus 187 ~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi 218 (447)
T 1e4i_A 187 QTAIDVGHHLLVAHGLSVRRFRELGTSGQIGI 218 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 211 1223578899999999864433
|
| >2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=5e-09 Score=112.81 Aligned_cols=135 Identities=10% Similarity=0.099 Sum_probs=100.0
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++ +.-.+...++.++++|+++.++||.
T Consensus 69 ~~eDi~lm~~~G~~~~R~sisWsRi~P~---------------------------~g~~n~~Gl~~y~~lid~l~~~GI~ 121 (454)
T 2o9p_A 69 FKEDVQLMKQLGFLHYRFSVAWPRIMPA---------------------------AGIINEEGLLFYEHLLDEIELAGLI 121 (454)
T ss_dssp HHHHHHHHHTTTCCEEEEECCHHHHCSS---------------------------TTCCCHHHHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHhcCCceEEecccHHhhCCC---------------------------CCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 6899999999999999999999766541 2334567899999999999999999
Q ss_pred EEEecCC-CCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCC------------CC-CCh
Q 008330 158 VILDNHI-SKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG------------PK-QNV 223 (570)
Q Consensus 158 VILD~H~-~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~------------~~-~~~ 223 (570)
+||++|+ ..|.|.... .+|. ++ ...+.|.++++.+++||++. |..+.++|||.. +. .+.
T Consensus 122 p~vtL~H~d~P~~L~~~---ggw~-~r-~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 194 (454)
T 2o9p_A 122 PMLTLYHWDLPQWIEDE---GGWT-QR-ETIQHFKTYASVIMDRFGER--INWWNTINEPYCASILGYGTGEHAPGHENW 194 (454)
T ss_dssp EEEEEESSCCBHHHHHT---TGGG-ST-HHHHHHHHHHHHHHHHSSSS--CSEEEEEECHHHHHHHHHTSSSSTTCCCCH
T ss_pred EEEEecCCCccHHHHhc---CCCC-Cc-chHHHHHHHHHHHHHHhCCc--ceeEEEecCcceecccccccCcCCCCcccH
Confidence 9999965 445554321 2433 33 24789999999999999988 778999999963 11 111
Q ss_pred hHHH-------HHHHHHHHHHHhcCCCcEE
Q 008330 224 KDWY-------RYMQLGAEAVHAANPEVLV 246 (570)
Q Consensus 224 ~~W~-------~~~~~~~~aIr~~dp~~lI 246 (570)
..-+ ....++++++|+++|+.-|
T Consensus 195 ~~~~~a~h~~llAha~Av~~~r~~~~~~~I 224 (454)
T 2o9p_A 195 REAFTAAHHILMCHGIASNLHKEKGLTGKI 224 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 1111 2235788999999997543
|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=2.6e-08 Score=104.31 Aligned_cols=253 Identities=13% Similarity=0.143 Sum_probs=148.6
Q ss_pred HHHHHHHHcCCcEEEe--cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 80 MLSKRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 80 ~~~~~i~~~GfN~VRl--Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
+..+.| +.+||.|++ .+.|..+++. +... -+..+|++|+.|.++||.
T Consensus 33 ~~~~l~-~~~fn~vt~en~~kW~~~ep~---------------------------~G~~---~f~~~D~~v~~a~~~gi~ 81 (356)
T 2uwf_A 33 RQAQIL-KHHYNSLVAENAMKPVSLQPR---------------------------EGEW---NWEGADKIVEFARKHNME 81 (356)
T ss_dssp HHHHHH-HHHCSEEEESSTTSHHHHCSB---------------------------TTBC---CCHHHHHHHHHHHHHTCE
T ss_pred HHHHHH-HhcCCEEEECCcccHHHhcCC---------------------------CCcc---CchHHHHHHHHHHHCCCE
Confidence 344444 689999999 6777655431 1111 246799999999999999
Q ss_pred EEEe---cCCCCCCccccCCCCCC-CCCCC----CCC----HHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCC--Ch
Q 008330 158 VILD---NHISKPGWCCSNSDGNG-FFGDQ----YFN----PDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQ--NV 223 (570)
Q Consensus 158 VILD---~H~~~~~w~~~~~dgng-~~~d~----~~~----~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~--~~ 223 (570)
|... .|...|.|.....+|.. -++.. ..+ .+.+.+..+.|++||++ .|..+|+.|||....+ ..
T Consensus 82 v~ghtlvW~~q~P~W~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~g--~v~~wdv~NE~~~~~g~~r~ 159 (356)
T 2uwf_A 82 LRFHTLVWHSQVPEWFFIDENGNRMVDETDPEKRKANKQLLLERMENHIKTVVERYKD--DVTSWDVVNEVIDDDGGLRE 159 (356)
T ss_dssp EEECCSEESSSCCGGGGBCTTSCBGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCSEEEEEESCBCTTSSBCC
T ss_pred EEEeeccccccCchhHhcCCCCcccccccccccCCCCHHHHHHHHHHHHHHHHHHcCC--cceEEEeecccccCCCCccc
Confidence 9754 37777888754222210 01110 011 24556788889999998 5889999999965321 11
Q ss_pred hHHH-----HHHHHHHHHHHh-cCCCcEEEEeCCCCCCc------c---hhhhhcccCcCCCCCEEEEEeecCCCCCCCC
Q 008330 224 KDWY-----RYMQLGAEAVHA-ANPEVLVILSGLNFDKD------L---SFVRNQAVNLTFTGKLVFEAHWYGFTDGQAW 288 (570)
Q Consensus 224 ~~W~-----~~~~~~~~aIr~-~dp~~lIiVeG~~w~~d------l---~~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w 288 (570)
..|+ .++..+.++.|+ ++|+..+++...+-... + ..+....+ ++ +-+=+..|+....
T Consensus 160 s~~~~~~G~~~i~~af~~Ar~~~dP~a~L~~Ndyn~~~~~k~~~~~~~v~~l~~~G~--~i-dgiG~Q~H~~~~~----- 231 (356)
T 2uwf_A 160 SEWYQITGTDYIKVAFETARKYGGEEAKLYINDYNTEVPSKRDDLYNLVKDLLEQGV--PI-DGVGHQSHIQIGW----- 231 (356)
T ss_dssp CHHHHHHTTHHHHHHHHHHHHHHCTTCCEEEEESCTTSHHHHHHHHHHHHHHHHTTC--CC-CEEEECCEEESSC-----
T ss_pred chHHhhccHHHHHHHHHHHHhhCCCCCEEEeccccccccchhHHHHHHHHHHHHCCC--cc-cEEEEEEecCCCC-----
Confidence 3354 467889999999 99999999865431110 0 01111111 11 2333444764311
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC----------------cchHHHHHHHHHHHHHC--C-
Q 008330 289 VDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN----------------VNDNRYLNCFFGVAAEL--D- 349 (570)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~----------------~~~~~~~~~~~~~~~~~--g- 349 (570)
+ ..+.+.+.+++ +.+.|+||.|+|+++...... .....+++.++..+.++ .
T Consensus 232 ----p--~~~~~~~~l~~----~a~~Gl~i~iTElDi~~~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~v 301 (356)
T 2uwf_A 232 ----P--SIEDTRASFEK----FTSLGLDNQVTELDMSLYGWPPTGAYTSYDDIPEELFQAQADRYDQLFELYEELSATI 301 (356)
T ss_dssp ----S--CHHHHHHHHHH----HHTTTCEEEEEEEEEESSCSSCTTCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGE
T ss_pred ----C--CHHHHHHHHHH----HHhcCCcEEEEeccccCCCCccccccccccCCChHHHHHHHHHHHHHHHHHHhccCCE
Confidence 0 12345544443 345799999999998753210 11345677777777763 3
Q ss_pred CceEEeccCceeecccC----cc--CCCceeeeecCCCCC
Q 008330 350 WDWALWTLVGSYYLREG----VI--GLNEYYGLFDWNWCD 383 (570)
Q Consensus 350 igw~~W~~~G~y~~r~~----~~--~~~et~Gll~~dw~~ 383 (570)
.+-++|.+...+-.+.+ .+ +..+.-+|++.|+..
T Consensus 302 ~git~WG~~D~~sW~~~~~~~~p~~g~~~~plLfd~~~~p 341 (356)
T 2uwf_A 302 SSVTFWGIADNHTWLDDRAREYNNGVGVDAPFVFDHNYRV 341 (356)
T ss_dssp EEEEESSSSTTSCHHHHHHHHHTTTCCCCCCSSBCTTSBB
T ss_pred EEEEEECCCCCCccccCccccCCCCCCCCCCeeECCCCCC
Confidence 46789988744332221 11 112233677777643
|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
Probab=98.79 E-value=1.8e-08 Score=110.04 Aligned_cols=250 Identities=14% Similarity=0.166 Sum_probs=150.1
Q ss_pred HHHHHHHHcCCcEEEec--ccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 80 MLSKRVVDMGFNCVRLT--WPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 80 ~~~~~i~~~GfN~VRlP--i~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
+..+.| +.+||.|++- +.|..+++. +... -|..+|++|++|.++||.
T Consensus 196 ~~~~l~-~~~FN~vT~eNemKW~~iEP~---------------------------~G~~---~f~~~D~ivd~a~~nGi~ 244 (530)
T 1us2_A 196 REQAVV-KKHFNHLTAGNIMKMSYMQPT---------------------------EGNF---NFTNADAFVDWATENNMT 244 (530)
T ss_dssp HHHHHH-HHHCSEEEESSTTSHHHHCSB---------------------------TTBC---CCHHHHHHHHHHHHTTCE
T ss_pred HHHHHH-HhhCCeEEECCcccHHHhcCC---------------------------CCcc---CchHHHHHHHHHHHCCCE
Confidence 445555 6799999994 666655431 1111 146799999999999999
Q ss_pred EEEe---cCC--CCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCC--C----hhHH
Q 008330 158 VILD---NHI--SKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQ--N----VKDW 226 (570)
Q Consensus 158 VILD---~H~--~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~--~----~~~W 226 (570)
|... .|. ..|.|..+. ++ +...-.+.+.++.+.|++||++++.|..+|+.|||....+ . ...|
T Consensus 245 VrgHtLvWhs~~q~P~Wv~~~-~G-----s~~~l~~~~~~~I~~vv~rYk~~g~I~~WdV~NE~~~~~g~~~~r~~~s~w 318 (530)
T 1us2_A 245 VHGHALVWHSDYQVPNFMKNW-AG-----SAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNAAIDDNSPANFRTTDSAF 318 (530)
T ss_dssp EEEEEEECCCGGGSCHHHHTC-CS-----CHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEESCBCSSSSCCBCCTTCHH
T ss_pred EEEecccccccccCchHHhcC-CC-----CHHHHHHHHHHHHHHHHHHhCCCCceEEEEeecCcccCCccccccccCCHH
Confidence 9843 565 557775321 11 1111135667788889999998888999999999864321 0 2346
Q ss_pred H-------HHHHHHHHHHHhcCCCcEEEEeCCCCCC-c------chh---hhhcccCcCCCCCEEEEEeecCCCCCCCCC
Q 008330 227 Y-------RYMQLGAEAVHAANPEVLVILSGLNFDK-D------LSF---VRNQAVNLTFTGKLVFEAHWYGFTDGQAWV 289 (570)
Q Consensus 227 ~-------~~~~~~~~aIr~~dp~~lIiVeG~~w~~-d------l~~---~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~ 289 (570)
+ .++.++.++.|+++|+..+++...+-.. . +.. +.... .++ +-+=+..|+....
T Consensus 319 ~~~lG~~~d~i~~AF~~Ar~aDP~AkL~~NDYn~~~~~~k~~~~~~lVk~l~~~G--vpI-DGIG~Q~H~~~~~------ 389 (530)
T 1us2_A 319 YVKSGNSSVYIERAFQTARAADPAVILYYNDYNIEQNNAKTTKMVDMVKDFQARS--IPI-DGVGFQMHVCMNY------ 389 (530)
T ss_dssp HHHTTSCSHHHHHHHHHHHHHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHTT--CCC-CEEEECCEEESSC------
T ss_pred HHHhCcHHHHHHHHHHHHHHHCCCCEEEecccccccccchhHHHHHHHHHHHHCC--Cce-eEEEEeeecCCCC------
Confidence 4 6788999999999999999996543211 0 011 11111 111 2343444754311
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCC-------------C----cchHHHHHHHHHHHH--HC--
Q 008330 290 DGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGN-------------N----VNDNRYLNCFFGVAA--EL-- 348 (570)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~-------------~----~~~~~~~~~~~~~~~--~~-- 348 (570)
+ ..+.+.+.+++ +.+.|+||.|+|+++..... . .....+++.++..+. +.
T Consensus 390 ---p--~~~~i~~~L~~----~a~lGlpI~ITElDv~~~~~~~~~~~~~~~~~~t~~~~~~QA~~y~~~~~~~l~~~~~~ 460 (530)
T 1us2_A 390 ---P--SIANISAAMKK----VVDLGLLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDTVPVN 460 (530)
T ss_dssp ---S--CHHHHHHHHHH----HHTTTCEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHHHHHHHHHHHHHHHHHSCGG
T ss_pred ---C--CHHHHHHHHHH----HHhcCCeEEEEeCccCCCcccccccccccccCCChHHHHHHHHHHHHHHHHHhhhccCC
Confidence 1 12345555543 34579999999999875430 0 112466777777773 22
Q ss_pred -CCceEEeccCceeecccCccC------CCceeeeecCCCCCc
Q 008330 349 -DWDWALWTLVGSYYLREGVIG------LNEYYGLFDWNWCDI 384 (570)
Q Consensus 349 -gigw~~W~~~G~y~~r~~~~~------~~et~Gll~~dw~~~ 384 (570)
-.+-++|.+...|-.+.+.+. ..+.-+|++.|+..-
T Consensus 461 ~v~GIT~WG~~D~~SW~~~~P~~~~~~g~~~~plLfD~d~~pK 503 (530)
T 1us2_A 461 QRGGISVWGTTDANTWLDGLYREQFEDEKISWPLLFDNNYNDK 503 (530)
T ss_dssp GEEEEEESCSBGGGCHHHHHTTTTTTTCCCCCCSSBCTTSCBC
T ss_pred ceEEEEEEcCcCCCccCCCCCcccccccCCCCceeECCCCCCC
Confidence 246789998755433332221 133446788886543
|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
Probab=98.78 E-value=1.3e-07 Score=98.81 Aligned_cols=243 Identities=14% Similarity=0.164 Sum_probs=146.0
Q ss_pred HHHHHHHHcCCcEEEe--cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 80 MLSKRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 80 ~~~~~i~~~GfN~VRl--Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
+..+.| +.+||.|++ -+.|..+++. +. . -+..+|++|+.|.++||.
T Consensus 29 ~~~~~~-~~~fn~vt~en~~kW~~~ep~---------------------------~G-~---~f~~~D~~v~~a~~~gi~ 76 (348)
T 1w32_A 29 ARQNIV-RAEFNQITAENIMKMSYMYSG---------------------------SN-F---SFTNSDRLVSWAAQNGQT 76 (348)
T ss_dssp HHHHHH-HHHCSEEEESSTTSGGGGEET---------------------------TE-E---CCHHHHHHHHHHHHTTCE
T ss_pred HHHHHH-HhhCCeEEECCccchhhhccC---------------------------CC-C---CchHHHHHHHHHHHCCCE
Confidence 444555 679999998 5666544321 11 1 146799999999999999
Q ss_pred EEEe---cCC--CCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCC-----C-----C
Q 008330 158 VILD---NHI--SKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPK-----Q-----N 222 (570)
Q Consensus 158 VILD---~H~--~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~-----~-----~ 222 (570)
|... .|. ..|.|..+. + . .-.+.+.++.+.|++||++ .|..+|+.|||.... + .
T Consensus 77 v~ghtl~W~~~~q~P~W~~~~---~-----~-~~~~~~~~~i~~v~~rY~g--~i~~wdv~NE~~~~~~~~~~g~~~~~~ 145 (348)
T 1w32_A 77 VHGHALVWHPSYQLPNWASDS---N-----A-NFRQDFARHIDTVAAHFAG--QVKSWDVVNEALFDSADDPDGRGSANG 145 (348)
T ss_dssp EEEEEEECCCGGGCCTTCSTT---C-----T-THHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCCGGGCTTCCCEETT
T ss_pred EEEEeeecCccccCchhhhcC---C-----H-HHHHHHHHHHHHHHHHhCC--ceeEEEeecccccCCccccCCcccccc
Confidence 9854 566 567775421 1 1 1257778899999999997 588999999986432 1 0
Q ss_pred --hhHHH------HHHHHHHHHHHhcCCCcEEEEeCCCCCCc-------c---hhhhhcccCcCCCCCEEEEEeecCCCC
Q 008330 223 --VKDWY------RYMQLGAEAVHAANPEVLVILSGLNFDKD-------L---SFVRNQAVNLTFTGKLVFEAHWYGFTD 284 (570)
Q Consensus 223 --~~~W~------~~~~~~~~aIr~~dp~~lIiVeG~~w~~d-------l---~~~~~~p~~l~~~~nlVys~H~Y~~~~ 284 (570)
...|+ .++..+.++.|+++|+..+++...+-..+ + ..+....+ ++ +-+=+..|+....
T Consensus 146 ~r~s~~~~~lgG~~~i~~aF~~Ar~adP~a~L~~NDyn~~~~~~k~~~~~~~v~~l~~~G~--~i-DgiG~Q~H~~~~~- 221 (348)
T 1w32_A 146 YRQSVFYRQFGGPEYIDEAFRRARAADPTAELYYNDFNTEENGAKTTALVNLVQRLLNNGV--PI-DGVGFQMHVMNDY- 221 (348)
T ss_dssp EECCHHHHHHTSTHHHHHHHHHHHHHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTC--CC-CEEEECCEEESSS-
T ss_pred cccchHHHhcCchHHHHHHHHHHHHhCCCCEEEecccccccCCchHHHHHHHHHHHHHCCC--cc-cEEEeccccCCCC-
Confidence 01244 46688999999999999999965432101 0 11111111 11 2333444654211
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHHHHHH--hcCCCeEEeccccCCCCC-------------C--------cchHHHHHHH
Q 008330 285 GQAWVDGNPNQVCGRVVDNVMRLSGFLL--EQGWPLFVSEFGADLRGN-------------N--------VNDNRYLNCF 341 (570)
Q Consensus 285 ~~~w~~~~~~~~~~~~~~~~~~~~g~l~--~~g~Pv~iGEFG~~~~~~-------------~--------~~~~~~~~~~ 341 (570)
+ ..+.+.+.+++ +. ..|+||.|+|+++..... . .....+++.+
T Consensus 222 --------p--~~~~~~~~l~~----~a~~~~Gl~i~ITElDv~~~~~~~~~~~~~~~~~~~~~~s~~~~~~QA~~y~~~ 287 (348)
T 1w32_A 222 --------P--SIANIRQAMQK----IVALSPTLKIKITELDVRLNNPYDGNSSNNYTNRNDCAVSCAGLDRQKARYKEI 287 (348)
T ss_dssp --------S--CHHHHHHHHHH----HHTTCSSCEEEEEEEEEESCCTTSSCSSSCCCSGGGGSSCCHHHHHHHHHHHHH
T ss_pred --------C--CHHHHHHHHHH----HhcccCCCeEEEEeCcccCCCcccccccccccCCCccccchhHHHHHHHHHHHH
Confidence 0 12344444443 34 579999999999875431 0 0124566777
Q ss_pred HHHHH--HC--CC-ceEEeccCceeecccCccCCCceeeeecCCCCC
Q 008330 342 FGVAA--EL--DW-DWALWTLVGSYYLREGVIGLNEYYGLFDWNWCD 383 (570)
Q Consensus 342 ~~~~~--~~--gi-gw~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~ 383 (570)
+..+. ++ .+ +-++|.+...|-.+.+..+..+.-+|++.|+..
T Consensus 288 ~~~~~~~~~~~~v~git~WG~~D~~sW~~p~~g~~~~plLfd~~~~p 334 (348)
T 1w32_A 288 VQAYLEVVPPGRRGGITVWGIADPDSWLYTHQNLPDWPLLFNDNLQP 334 (348)
T ss_dssp HHHHHHHSCTTCEEEEEESCSBGGGSTTSEETTEECCCSSBCTTSCB
T ss_pred HHHHhccccCCceEEEEEECCccCCccCCCcCCCCCCCeeECCCCCC
Confidence 77777 32 34 678999875443333111212334577877653
|
| >1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A | Back alignment and structure |
|---|
Probab=98.76 E-value=2.1e-08 Score=108.72 Aligned_cols=135 Identities=9% Similarity=-0.006 Sum_probs=98.6
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++. ..-.++..++.++++|+++.++||.
T Consensus 73 y~eDi~lm~~lG~~~yRfsIsWsRI~P~g--------------------------~g~~n~~gl~~Y~~lid~l~~~GI~ 126 (479)
T 1gnx_A 73 WREDVALMAELGLGAYRFSLAWPRIQPTG--------------------------RGPALQKGLDFYRRLADELLAKGIQ 126 (479)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHSGGG--------------------------SSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHcCCCEEEecccHHHhccCC--------------------------CCCcCHHHHHHHHHHHHHHHHcCCE
Confidence 58999999999999999999997665420 0113567899999999999999999
Q ss_pred EEEecCCC-CCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCC------------CC-CCh
Q 008330 158 VILDNHIS-KPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG------------PK-QNV 223 (570)
Q Consensus 158 VILD~H~~-~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~------------~~-~~~ 223 (570)
+||++|+. .|.|.... .+|- ++ ...+.|.++++.+++||++. |-.+..+|||.. +. ...
T Consensus 127 p~vtL~H~d~P~~L~~~---GGw~-~r-~~v~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 199 (479)
T 1gnx_A 127 PVATLYHWDLPQELENA---GGWP-ER-ATAERFAEYAAIAADALGDR--VKTWTTLNEPWCSAFLGYGSGVHAPGRTDP 199 (479)
T ss_dssp EEEEEESSCCBHHHHHT---TCTT-ST-HHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCH
T ss_pred EEEEeCCCcccHHHHhc---CCCC-CH-HHHHHHHHHHHHHHHHhCCc--ceeEEEecCcchhhhhhhccCcCCCCccCh
Confidence 99999654 45554321 2443 33 24789999999999999996 777899999963 11 111
Q ss_pred hHH-------HHHHHHHHHHHHhcC-CCcE
Q 008330 224 KDW-------YRYMQLGAEAVHAAN-PEVL 245 (570)
Q Consensus 224 ~~W-------~~~~~~~~~aIr~~d-p~~l 245 (570)
..- .....++++++|+++ |+.-
T Consensus 200 ~~~~~a~h~lllAha~Av~~~r~~~~~~~~ 229 (479)
T 1gnx_A 200 VAALRAAHHLNLGHGLAVQALRDRLPADAQ 229 (479)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCCe
Confidence 111 122357888999998 8754
|
| >3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=98.76 E-value=4.2e-07 Score=97.95 Aligned_cols=136 Identities=13% Similarity=0.068 Sum_probs=97.7
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|+.|+.++|..+.++. . ...++..++.++++|+++.++||.
T Consensus 68 y~eDi~Lm~elG~~~yRfSIsWsRI~P~g---------------------~-----g~~N~~Gl~fY~~lid~l~~~GIe 121 (458)
T 3ta9_A 68 YREDIELMKEIGIRSYRFSTSWPRILPEG---------------------K-----GRVNQKGLDFYKRLVDNLLKANIR 121 (458)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSTTS---------------------S-----SCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHcCCCEEEecCcHHHhCcCC---------------------C-----CCcCHHHHHHHHHHHHHHHHcCCe
Confidence 58999999999999999999997665420 0 123567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCC------------C-CCh
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP------------K-QNV 223 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~------------~-~~~ 223 (570)
.|+.+++.. |.|.. +..||.+.. ..+.|.++-+.+++||++. |--+-.+|||... . .+.
T Consensus 122 P~vTL~H~dlP~~L~---~~GGW~nr~--~v~~F~~YA~~~f~~fgdr--Vk~W~T~NEP~~~~~~gy~~G~~~Pg~~~~ 194 (458)
T 3ta9_A 122 PMITLYHWDLPQALQ---DKGGWTNRD--TAKYFAEYARLMFEEFNGL--VDLWVTHNEPWVVAFEGHAFGNHAPGTKDF 194 (458)
T ss_dssp EEEEEESSCCBHHHH---TTTGGGSHH--HHHHHHHHHHHHHHHTTTT--CCEEEEEECHHHHHHHHHTSCCSTTCCCCH
T ss_pred EEEEecCCCCCHhHH---hcCCCCCHH--HHHHHHHHHHHHHHHhcCc--CCEEEEecCcchhhcccccccccCCCcCCH
Confidence 999987643 54432 123544332 3688999999999999987 4446789999631 0 122
Q ss_pred hHHH-------HHHHHHHHHHHhcCCCcEE
Q 008330 224 KDWY-------RYMQLGAEAVHAANPEVLV 246 (570)
Q Consensus 224 ~~W~-------~~~~~~~~aIr~~dp~~lI 246 (570)
..-+ ....++++++|+..|+.-|
T Consensus 195 ~~~~~~~h~~llAha~Av~~~r~~~~~~~I 224 (458)
T 3ta9_A 195 KTALQVAHHLLLSHGMAVDIFREEDLPGEI 224 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 2221 2235778889999987544
|
| >2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=3.9e-08 Score=116.29 Aligned_cols=144 Identities=14% Similarity=0.139 Sum_probs=99.4
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
+|+++++||+||.. +.. .......++.+++.||++|||+||+ +... +
T Consensus 352 NG~pi~l~G~n~~p--d~~--~~~~~e~~~~dl~~~k~~g~N~iR~--~h~~--~------------------------- 398 (1032)
T 2vzs_A 352 NGKPLLIRGGGYTP--DLF--LRWNETAAADKLKYVLNLGLNTVRL--EGHI--E------------------------- 398 (1032)
T ss_dssp TTEEECEEEEECCC--CTT--CCCCHHHHHHHHHHHHHTTCCEEEE--ESCC--C-------------------------
T ss_pred CCEEEEEeccccCc--ccc--ccCCHHHHHHHHHHHHHcCCCEEEC--CCCC--C-------------------------
Confidence 99999999999932 111 1223334678899999999999998 2110 0
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCcc--ccCC-CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCc
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWC--CSNS-DGNGFFGDQYFNPDLWIKGLTKMATIFNGVRN 206 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~--~~~~-dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~ 206 (570)
=++..+.|.+.||+|+-|+... +.|. |... ....|+. .+.+.+.+-++.+.+|++++|.
T Consensus 399 --------------~~~fydlcDelGilVw~e~~~~-~~w~~~~~~~~~~~~~~~---~~~~~~~~~~~~~V~R~rNHPS 460 (1032)
T 2vzs_A 399 --------------PDEFFDIADDLGVLTMPGWECC-DKWEGQVNGEEKGEPWVE---SDYPIAKASMFSEAERLRDHPS 460 (1032)
T ss_dssp --------------CHHHHHHHHHHTCEEEEECCSS-SGGGTTTSTTSSSCCCCT---THHHHHHHHHHHHHHHHTTCTT
T ss_pred --------------cHHHHHHHHHCCCEEEEccccc-ccccccCCCCCcccccCh---hHHHHHHHHHHHHHHHhcCCCe
Confidence 1456789999999999998432 1231 1111 1111111 1246788889999999999999
Q ss_pred EEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCC
Q 008330 207 VVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGL 251 (570)
Q Consensus 207 Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~ 251 (570)
|+.+.+.||+.+. .. +.++..+.||+.||.++|..+..
T Consensus 461 Ii~Ws~gNE~~~~----~~---~~~~~~~~~k~~DptRpv~~~s~ 498 (1032)
T 2vzs_A 461 VISFHIGSDFAPD----RR---IEQGYLDAMKAADFLLPVIPAAS 498 (1032)
T ss_dssp BCCEESCSSSCCC----HH---HHHHHHHHHHHTTCCSCEESCSS
T ss_pred EEEEEeccCCCch----HH---HHHHHHHHHHHhCCCCeEEecCC
Confidence 9999999999653 22 33455688899999999887654
|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=2.4e-07 Score=95.94 Aligned_cols=248 Identities=14% Similarity=0.201 Sum_probs=150.1
Q ss_pred HHHHHcCCcEEEe--cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEE
Q 008330 83 KRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVIL 160 (570)
Q Consensus 83 ~~i~~~GfN~VRl--Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VIL 160 (570)
..+....||.|.. .+-|..+++. .| .. -+...|++|++|.++||.|..
T Consensus 30 ~~~~~~~Fn~~t~eN~mKW~~iep~--------------------~G-------~~---~f~~~D~~v~~a~~~gi~vrg 79 (331)
T 3emz_A 30 GEFIAKHYNSVTAENQMKFEEVHPR--------------------EH-------EY---TFEAADEIVDFAVARGIGVRG 79 (331)
T ss_dssp HHHHHHHCSEEEESSTTSHHHHCSB--------------------TT-------BC---CCHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHhCCEEEECcccchhhhcCC--------------------CC-------cc---ChhHHHHHHHHHHHCCCEEee
Confidence 4455678999998 6666555431 11 11 145689999999999999964
Q ss_pred ---ecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCC----hhHHH-----H
Q 008330 161 ---DNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQN----VKDWY-----R 228 (570)
Q Consensus 161 ---D~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~----~~~W~-----~ 228 (570)
-.|...|.|.....++.. + +...-.+.+.++.+.|++|||+. |..+|+.|||....++ ...|+ .
T Consensus 80 HtLvWh~q~P~W~~~~~~g~~-~-~~~~l~~~~~~~I~~v~~rYkg~--i~~WDVvNE~~~~~~~~~~r~s~~~~~lG~~ 155 (331)
T 3emz_A 80 HTLVWHNQTPAWMFEDASGGT-A-SREMMLSRLKQHIDTVVGRYKDQ--IYAWDVVNEAIEDKTDLIMRDTKWLRLLGED 155 (331)
T ss_dssp CCSBCSSSCCGGGGBCTTSSB-C-CHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEECCBCSSTTCCBCCCHHHHHTCTT
T ss_pred eeeeccccCcHhHhccccCCC-C-CHHHHHHHHHHHHHHHHHHhCCC--ceEEEEeccccCCCCCccccCCchhhhcCHH
Confidence 347777888643222211 1 00011345677889999999984 8889999999653211 12454 4
Q ss_pred HHHHHHHHHHhcCCCcEEEEeCCCCCCc------chh---hhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhH
Q 008330 229 YMQLGAEAVHAANPEVLVILSGLNFDKD------LSF---VRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGR 299 (570)
Q Consensus 229 ~~~~~~~aIr~~dp~~lIiVeG~~w~~d------l~~---~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~ 299 (570)
|+..+.++.|+++|+..+++...+-... +.. +....+ +. +-+=+..|+.... + ..+.
T Consensus 156 ~i~~aF~~Ar~adP~a~L~~NDyn~~~~~k~~~~~~~v~~l~~~Gv--pi-dgiG~Q~H~~~~~---------p--~~~~ 221 (331)
T 3emz_A 156 YLVQAFNMAHEADPNALLFYNDYNETDPVKREKIYNLVRSLLDQGA--PV-HGIGMQGHWNIHG---------P--SMDE 221 (331)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEESSCSSHHHHHHHHHHHHHHHHHTC--CC-CEEEECCEEETTB---------S--CHHH
T ss_pred HHHHHHHHHHhhCCCceEEeccccccChHHHHHHHHHHHHHHHCCC--cc-ceEEECceecCCC---------C--CHHH
Confidence 6788899999999999999976442111 011 111111 22 4566677763211 0 1234
Q ss_pred HHHHHHHHHHHHHhcCCCeEEeccccCCCCC----------C----cchHHHHHHHHHHHHHC--CC-ceEEeccCceee
Q 008330 300 VVDNVMRLSGFLLEQGWPLFVSEFGADLRGN----------N----VNDNRYLNCFFGVAAEL--DW-DWALWTLVGSYY 362 (570)
Q Consensus 300 ~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~----------~----~~~~~~~~~~~~~~~~~--gi-gw~~W~~~G~y~ 362 (570)
+.+.+++ +.+.|+||.|+|+.+..... . .....+++.++..+.++ .+ +-++|.+...|-
T Consensus 222 ~~~~l~~----~a~lGl~v~iTElDi~~~~~~~~~~~~~~~t~~~~~~Qa~~y~~~~~~~~~~~~~v~giT~WG~~D~~s 297 (331)
T 3emz_A 222 IRQAIER----YASLDVQLHVTELDLSVFRHEDQRTDLTEPTAEMAELQQKRYEDIFGLFREYRSNITSVTFWGVADNYT 297 (331)
T ss_dssp HHHHHHH----HHTTSCEEEEEEEEEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESSSSTTCC
T ss_pred HHHHHHH----HHHcCCcEEEeecccCCccccccccccCCCCHHHHHHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCc
Confidence 5555543 34589999999999865311 1 11346677788887774 34 678999876555
Q ss_pred cccCccCC--CceeeeecCCCC
Q 008330 363 LREGVIGL--NEYYGLFDWNWC 382 (570)
Q Consensus 363 ~r~~~~~~--~et~Gll~~dw~ 382 (570)
.+.+.+.. .+.-+|++.++.
T Consensus 298 W~~~~p~~g~~~~pllfd~~~~ 319 (331)
T 3emz_A 298 WLDNFPVRGRKNWPFVFDTELQ 319 (331)
T ss_dssp GGGSSSSTTCCCCCSSBCTTSC
T ss_pred cCCCCCCCCCCCCCCCcCCCcC
Confidence 55433322 233456676653
|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
Probab=98.73 E-value=8.9e-08 Score=99.55 Aligned_cols=217 Identities=16% Similarity=0.240 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHhcCCCEEE---EecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 141 IKAFQAVVASLGNNNVMVI---LDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VI---LD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
+...|++|++|.++||.|. |-.|...|.|.... + |... .-.+.+.+..+.+++||++. |..+|+.|||.
T Consensus 81 f~~~D~~v~~a~~~gi~vrgHtLvWh~q~P~W~~~~----~-~~~~-~~~~~~~~~i~~v~~rY~g~--i~~WDVvNE~~ 152 (341)
T 3niy_A 81 FTPAEKHVEFAEENNMIVHGHTLVWHNQLPGWITGR----E-WTKE-ELLNVLEDHIKTVVSHFKGR--VKIWDVVNEAV 152 (341)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSSSCCHHHHTS----C-CCHH-HHHHHHHHHHHHHHHHTTTT--CCEEEEEECCB
T ss_pred hHHHHHHHHHHHHCCCeEEeeeccccccCchhhhcC----C-CCHH-HHHHHHHHHHHHHHHHcCCC--ccEEEEecccc
Confidence 4568999999999999995 56787778885310 1 1111 12456778889999999985 78899999997
Q ss_pred CCCCC--hhHHH-----HHHHHHHHHHHhcCCCcEEEEeCCCCCCc-------ch---hhhhcccCcCCCCCEEEEEeec
Q 008330 218 GPKQN--VKDWY-----RYMQLGAEAVHAANPEVLVILSGLNFDKD-------LS---FVRNQAVNLTFTGKLVFEAHWY 280 (570)
Q Consensus 218 ~~~~~--~~~W~-----~~~~~~~~aIr~~dp~~lIiVeG~~w~~d-------l~---~~~~~p~~l~~~~nlVys~H~Y 280 (570)
...+. ...|+ .++..+.++.|+++|+..+++...+-... +. .+....+ +. +-+=+..|+.
T Consensus 153 ~~~g~~r~s~~~~~lG~~~i~~af~~Ar~~dP~a~L~~NDyn~e~~~~k~~~~~~lv~~l~~~Gv--pI-dgIG~Q~H~~ 229 (341)
T 3niy_A 153 SDSGTYRESVWYKTIGPEYIEKAFRWTKEADPDAILIYNDYSIEEINAKSNFVYNMIKELKEKGV--PV-DGIGFQMHID 229 (341)
T ss_dssp CTTSSBCCCHHHHHHCTHHHHHHHHHHHHHCTTSEEEEEESSCSSSSHHHHHHHHHHHHHHHTTC--CC-CEEEECCEEE
T ss_pred cccccccccchhhhcCHHHHHHHHHHHHHHCCCceEEeeccccccCchHHHHHHHHHHHHHHCCC--Cc-ceEeeeeecC
Confidence 54211 12354 46788999999999999999975432110 00 1111111 22 4566677764
Q ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC------cchHHHHHHHHHHHHHCC--Cce
Q 008330 281 GFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN------VNDNRYLNCFFGVAAELD--WDW 352 (570)
Q Consensus 281 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~------~~~~~~~~~~~~~~~~~g--igw 352 (570)
.... + .+.+.+.+++ +.+.|+||.|+|+.+....+. .....+++.++..+.++. .|-
T Consensus 230 ~~~~--------~---~~~~~~~l~~----~a~lGl~v~iTElDv~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~v~gi 294 (341)
T 3niy_A 230 YRGL--------N---YDSFRRNLER----FAKLGLQIYITEMDVRIPLSGSEDYYLKKQAEICAKIFDICLDNPAVKAI 294 (341)
T ss_dssp TTCC--------C---HHHHHHHHHH----HHHTTCEEEEEEEEEEEESSSCHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred CCCC--------C---HHHHHHHHHH----HHHcCCeEEEEeccccCCCCCChhHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 3211 1 1345555543 345899999999998653221 123567777777777653 367
Q ss_pred EEeccCceeecccCccCCCceeeeecCCCCC
Q 008330 353 ALWTLVGSYYLREGVIGLNEYYGLFDWNWCD 383 (570)
Q Consensus 353 ~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~ 383 (570)
++|.+...|-.+.+.....+.-+|++.|+..
T Consensus 295 t~Wg~~D~~sW~~~~~~~~~~plLfd~~~~p 325 (341)
T 3niy_A 295 QFWGFTDKYSWVPGFFKGYGKALLFDENYNP 325 (341)
T ss_dssp EESCSBTTSCSHHHHSTTEECCSSBCTTSCB
T ss_pred EEECCccCCccCCCCCCCCCCCccCCCCcCC
Confidence 8998764443332211112334677877653
|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=4.1e-08 Score=114.13 Aligned_cols=174 Identities=16% Similarity=0.108 Sum_probs=118.0
Q ss_pred CeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCC-CChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhh
Q 008330 38 PLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLS-KQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSF 116 (570)
Q Consensus 38 ~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~-~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~ 116 (570)
.++.+++.|+ -+|+|+.+.|....-+ -+. ..-.+++++.||++|+|+||+.+.|...++.
T Consensus 5 ~v~~d~~~~~-idG~p~~l~sG~~hy~-------r~p~~~~W~d~l~kmka~G~NtV~~yvfW~~hEP~----------- 65 (971)
T 1tg7_A 5 YVTWDEHSIF-VNGERLMIFSGEVHPY-------RLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGN----------- 65 (971)
T ss_dssp SEEECSSCEE-ETTEEECEEEEECCGG-------GSCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSB-----------
T ss_pred eEEEcCCEEE-ECCeEEEEEEEEECcc-------cCCchHHHHHHHHHHHHcCCCEEEEeccHHHhCCC-----------
Confidence 4677777664 4899999999876422 222 2346899999999999999999998766542
Q ss_pred hhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCC--CC-CCCC-----CCCC--
Q 008330 117 QKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDG--NG-FFGD-----QYFN-- 186 (570)
Q Consensus 117 ~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dg--ng-~~~d-----~~~~-- 186 (570)
+|. .+-+...-|+++|+.|.++||+|||-. |.|.|+.-+. -+ |... +..+
T Consensus 66 ---------~G~-------fdF~g~~dL~~fl~~a~e~Gl~ViLr~----GPyi~aE~~~GG~P~WL~~~p~~lR~~~p~ 125 (971)
T 1tg7_A 66 ---------PGH-------YSAEGIFDLQPFFDAAKEAGIYLLARP----GPYINAEVSGGGFPGWLQRVDGILRTSDEA 125 (971)
T ss_dssp ---------TTB-------CCCCGGGCSHHHHHHHHHHTCEEEEEC----CSCCCTTBGGGGCCGGGGGCSSCTTSSCHH
T ss_pred ---------CCe-------ecccchHHHHHHHHHHHHcCCEEEEec----CCcccceecCCCcceeecccCCEecCCCHH
Confidence 111 222333348999999999999999963 2233332110 11 1111 0111
Q ss_pred -HHHHHHHHHHHHHHhCCCC-----cEEEEeccCCCCCCC--CChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 187 -PDLWIKGLTKMATIFNGVR-----NVVGMSLRNELRGPK--QNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 187 -~~~~~~~w~~iA~ryk~~p-----~Vig~dL~NEP~~~~--~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
.++..++.++|+++++.++ .||++.+=||-.... .-...-..|++...+.+|+.+++.+++.--
T Consensus 126 y~~~~~~~~~~l~~~~~~~~~~~ggpVI~~QveNEyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~vPl~tn~ 197 (971)
T 1tg7_A 126 YLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISND 197 (971)
T ss_dssp HHHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBCCB
T ss_pred HHHHHHHHHHHHHHHHhhhhhcCCCCEEEEecccccCcccccccchhHHHHHHHHHHHHHHhCCCeeEEEec
Confidence 3556678899999999776 899999999994421 000125678888999999999998877753
|
| >1knl_A Endo-1,4-beta-xylanase A; carbohydrate binding module, CBM13 xylan binding domain, LEC ricin B-like, beta-trefoil fold, hydrolase; 1.20A {Streptomyces lividans} SCOP: b.42.2.1 PDB: 1knm_A* 1mc9_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=3.6e-08 Score=87.61 Aligned_cols=101 Identities=22% Similarity=0.367 Sum_probs=77.1
Q ss_pred cceeeCCCCceeeeecC----CCCceecCCCCCC--CCccccCCcceeecccceEEeecc--CCccceeccccC-CCCCc
Q 008330 411 HKVIYHPATGLCVQRKS----FLDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICT-DCGST 481 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~----~~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~-~~~~~ 481 (570)
+..+....+|+|+++.+ ...++.+++|.++ ++|.++..+.|+. .+++||++.+ +|.++.+ +.|. +.+|+
T Consensus 6 ~g~i~n~~sg~cld~~~~~~~~g~~v~~~~c~~~~~Q~w~~~~~g~i~~-~s~~CLd~~~~~~g~~v~~-~~c~~~~~Q~ 83 (130)
T 1knl_A 6 GGQIKGVGSGRCLDVPDASTSDGTQLQLWDCHSGTNQQWAATDAGELRV-YGDKCLDAAGTSNGSKVQI-YSCWGGDNQK 83 (130)
T ss_dssp CBCCEETTTCCEEECGGGCCCTTCBCEEECCCSCGGGCBEECTTSCEEE-TTTEEEEESCSSTTCBEEE-EECCCCGGGC
T ss_pred eeEEEECCCCCEEECCCCCCCCCCEEEEEecCCCcccEEEEeCCCcEEE-CCCcEEeCCCCCCCCEEEE-EecCCCCcce
Confidence 45677888999999943 2356999999875 7999999888874 6789999944 4676666 8898 67899
Q ss_pred eeEeeccccEEEEecCCCceEEEeecC----CC-ceeeccee
Q 008330 482 WEIISDSKMHLSSKADNGTTVCLDVDS----SN-TIVTNTCK 518 (570)
Q Consensus 482 W~~~s~~~~~~~~~~~~~~~~cld~~~----~~-~~~~~~c~ 518 (570)
|++..++. |.. ..+++|||+.+ +| .|+.+.|.
T Consensus 84 W~~~~~g~--i~~---~~sg~cLdv~~~~~~~g~~v~~~~c~ 120 (130)
T 1knl_A 84 WRLNSDGS--VVG---VQSGLCLDAVGNGTANGTLIQLYTCS 120 (130)
T ss_dssp EEECTTSC--EEE---TTTCCEEEEGGGCCSTTCBEEEECCC
T ss_pred EEECCCCe--EEE---CCCCceEECCCCCCCCCCEEEEEeCC
Confidence 99988764 432 25789999962 45 67778874
|
| >1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=7.5e-08 Score=104.18 Aligned_cols=135 Identities=13% Similarity=0.061 Sum_probs=99.3
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++ | ..-.++..++.++++|+.+.++||.
T Consensus 56 y~eDi~lm~~~G~~~~R~sisWsRi~P~---------------------G-----~g~~N~~gl~~y~~lid~l~~~GI~ 109 (468)
T 1pbg_A 56 YPVDLELAEEYGVNGIRISIAWSRIFPT---------------------G-----YGEVNEKGVEFYHKLFAECHKRHVE 109 (468)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHSTT---------------------S-----SSSCCHHHHHHHHHHHHHHHHHTCE
T ss_pred CHHHHHHHHHhCCCEEEeccCHhhhccC---------------------C-----CCCcCHHHHHHHHHHHHHHHHcCCE
Confidence 6899999999999999999999766542 0 1223567899999999999999999
Q ss_pred EEEecCCC-CCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCC------------C-C-C
Q 008330 158 VILDNHIS-KPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP------------K-Q-N 222 (570)
Q Consensus 158 VILD~H~~-~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~------------~-~-~ 222 (570)
+||++|+. .|.|.... .+|.+ + ...+.|.++.+.+++||++ |..+..+|||... . . +
T Consensus 110 p~vtL~H~d~P~~L~~~---ggw~~-r-~~~~~F~~ya~~~~~~~gd---V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 181 (468)
T 1pbg_A 110 PFVTLHHFDTPEALHSN---GDFLN-R-ENIEHFIDYAAFCFEEFPE---VNYWTTFNEIGPIGDGQYLVGKFPPGIKYD 181 (468)
T ss_dssp EEEEEESSCCBHHHHHT---TGGGS-T-HHHHHHHHHHHHHHHHCTT---CCEEEEESCHHHHHHHHHTSCCSTTCCCSC
T ss_pred EEEEeCCCccCHHHHhc---CCCCC-h-HHHHHHHHHHHHHHHHhCC---CCEEEEecCchhhhcccccccccCCccccc
Confidence 99999654 45553221 24433 3 2478999999999999998 8889999999631 1 1 1
Q ss_pred hhHHH-------HHHHHHHHHHHhcCCCcEE
Q 008330 223 VKDWY-------RYMQLGAEAVHAANPEVLV 246 (570)
Q Consensus 223 ~~~W~-------~~~~~~~~aIr~~dp~~lI 246 (570)
...-+ ....++++++|+++|+.-|
T Consensus 182 ~~~~~~a~h~~llAha~Av~~~r~~~~~~~I 212 (468)
T 1pbg_A 182 LAKVFQSHHNMMVSHARAVKLYKDKGYKGEI 212 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 12221 2235788999999998554
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=2.3e-07 Score=102.96 Aligned_cols=169 Identities=9% Similarity=0.085 Sum_probs=109.3
Q ss_pred eEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhh
Q 008330 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQK 118 (570)
Q Consensus 39 L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~ 118 (570)
++.+++.|+ -+|+++.+.|....-+. +...-.+++++.||++|+|+||+.+.|...++.
T Consensus 11 v~~d~~~f~-ldGkp~~i~sG~~Hy~r-------~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~------------- 69 (654)
T 3thd_A 11 IDYSRDSFL-KDGQPFRYISGSIHYSR-------VPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPW------------- 69 (654)
T ss_dssp EETTTTEEE-ETTEEECCEEEECCGGG-------SCGGGHHHHHHHHHHTTCSEEEEECCHHHHCSB-------------
T ss_pred EEEcCCEEE-ECCEEEEEEEEeccccc-------CCHHHHHHHHHHHHHcCCCEEEEEechhhcCCC-------------
Confidence 444566543 38999999998753221 122346899999999999999999999776542
Q ss_pred ccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCC--C-CCCCC------CCCC---
Q 008330 119 LGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDG--N-GFFGD------QYFN--- 186 (570)
Q Consensus 119 lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dg--n-g~~~d------~~~~--- 186 (570)
.|. .+-+...-|+++|+.|.++||+|||.. +.|.|+.-+. - .|... +..+
T Consensus 70 -------~G~-------fdF~g~~DL~~fl~~a~~~GL~ViLr~----GPyi~aEw~~GG~P~WL~~~p~i~~Rt~~p~y 131 (654)
T 3thd_A 70 -------PGQ-------YQFSEDHDVEYFLRLAHELGLLVILRP----GPYICAEWEMGGLPAWLLEKESILLRSSDPDY 131 (654)
T ss_dssp -------TTB-------CCCSGGGCHHHHHHHHHHTTCEEEEEC----CSCCCTTBGGGGCCGGGGGSTTCCSSSCCHHH
T ss_pred -------CCc-------cCccchHHHHHHHHHHHHcCCEEEecc----CCccccccCCCcCChHHhcCCCceEecCCHHH
Confidence 111 222333348999999999999999963 2333332111 1 12111 0012
Q ss_pred HHHHHHHHHHHHHH-----hCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhc-CCCcEEEEe
Q 008330 187 PDLWIKGLTKMATI-----FNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAA-NPEVLVILS 249 (570)
Q Consensus 187 ~~~~~~~w~~iA~r-----yk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~-dp~~lIiVe 249 (570)
.++..++.++|+++ |++.+.||++.+=||-....... .+||+.+.+..|+. .-+++++-.
T Consensus 132 ~~~~~~~~~~l~~~l~~~~~~~ggpVI~~QvENEyG~y~~~d---~~Ym~~l~~~~~~~~Gi~v~l~t~ 197 (654)
T 3thd_A 132 LAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACD---FDYLRFLQKRFRHHLGDDVVLFTT 197 (654)
T ss_dssp HHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGGSSCCC---HHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred HHHHHHHHHHHHHHhhhhhccCCCCEEEEEeccccccccccc---HHHHHHHHHHHHHhcCCceeeEee
Confidence 34556778889999 78889999999999985432112 36777777777775 555555553
|
| >3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene} | Back alignment and structure |
|---|
Probab=98.53 E-value=1.5e-07 Score=87.36 Aligned_cols=107 Identities=7% Similarity=0.094 Sum_probs=78.9
Q ss_pred ccceeeCCCCceeeeecCC----CCceecCCCCCC--CCccccCCc----ceeecccceEEeeccC----Cccceecccc
Q 008330 410 LHKVIYHPATGLCVQRKSF----LDPLTLGPCTES--EAWSYTPHK----TISLKGAYFCLQAKHV----GKPAKLGIIC 475 (570)
Q Consensus 410 ~~~~~~~~~tg~c~~~~~~----~~~~~~~~c~~~--~~W~~~~~~----~~~~~~~~~cl~a~~~----g~~~~~~~~c 475 (570)
.++.+....||+|+++.+. ..++.+++|.++ ++|.+++.+ .|+.+.+++||++.+. |.++.+ +.|
T Consensus 27 g~y~i~n~~sg~cLdv~~~~~~~g~~v~~~~c~~~~~Q~W~~~~~~~g~y~i~~~~sg~cLdv~~~~~~~G~~v~~-~~c 105 (165)
T 3pg0_A 27 GYYKLVARHSGKALDVENASTSDGANVIQYSYSGGDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVIQ-YSY 105 (165)
T ss_dssp CEEEEEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEEEEEEETTEEEEEETTTCCEEEEGGGCCSTTCBEEE-ECC
T ss_pred CEEEEEECCCCCEEEeCCCCCCCCCEEEEECCCCCccceEEEEECCCCEEEEEECCCCCEEEeCCCCCCCCCEEEE-EcC
Confidence 4688889999999998432 356999999975 799998654 3666778999998763 566555 889
Q ss_pred C-CCCCceeEeeccccEEEEecCCCceEEEeecC----CC-ceeeccee
Q 008330 476 T-DCGSTWEIISDSKMHLSSKADNGTTVCLDVDS----SN-TIVTNTCK 518 (570)
Q Consensus 476 ~-~~~~~W~~~s~~~~~~~~~~~~~~~~cld~~~----~~-~~~~~~c~ 518 (570)
. +.+|+|++...+......+ ...+++|||+.+ +| .|+.+.|.
T Consensus 106 ~~~~~Q~W~~~~~g~g~~~i~-~~~sg~cLdv~~~~~~~G~~v~~~~c~ 153 (165)
T 3pg0_A 106 SGGDNQQWRLVDLGDGYYKLV-ARHSGKALDVENASTSDGANVIQYSYS 153 (165)
T ss_dssp CCCGGGCEEEEECSSSCEEEE-ETTTCCEEEEGGGCCSTTCBEEEECCC
T ss_pred CCCCccEEEEEECCCCEEEEE-ECCCCcEEEcCCCCCCCCCEEEEeCCC
Confidence 8 7889999987764322222 225779999963 45 67778774
|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
Probab=98.51 E-value=5.2e-07 Score=93.29 Aligned_cols=224 Identities=13% Similarity=0.179 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHhcCCCEEE---EecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 141 IKAFQAVVASLGNNNVMVI---LDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VI---LD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
+...|++|++|.++||.|. |-.|...|.|.... . | +...-.+.+.++.+.|++||++. |..+|+.|||.
T Consensus 62 f~~~D~~v~~a~~~gi~vrGHtLvWh~q~P~W~~~~----~-~-~~~~l~~~~~~~I~~v~~rY~g~--i~~WDVvNE~~ 133 (327)
T 3u7b_A 62 WGPADQHAAAATSRGYELRCHTLVWHSQLPSWVANG----N-W-NNQTLQAVMRDHINAVMGRYRGK--CTHWDVVNEAL 133 (327)
T ss_dssp CHHHHHHHHHHHTTTCEEEEEEEEESTTCCHHHHTC----C-C-CHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEECCB
T ss_pred hHHHHHHHHHHHHCCCEEEEeeeecCCcCcHHHhcC----C-C-CHHHHHHHHHHHHHHHHHHhCCC--ceEEEEecccc
Confidence 4568999999999999995 55687777775321 0 1 01011345678889999999985 78899999996
Q ss_pred CCCCC--hhHHH-----HHHHHHHHHHHhcCCCcEEEEeCCCCCCc-------c---hhhhhcccCcCCCCCEEEEEeec
Q 008330 218 GPKQN--VKDWY-----RYMQLGAEAVHAANPEVLVILSGLNFDKD-------L---SFVRNQAVNLTFTGKLVFEAHWY 280 (570)
Q Consensus 218 ~~~~~--~~~W~-----~~~~~~~~aIr~~dp~~lIiVeG~~w~~d-------l---~~~~~~p~~l~~~~nlVys~H~Y 280 (570)
...+. ...|+ .|+..+.++.|+++|+..+++...+-... + ..+.... ++. +-+=+..|+.
T Consensus 134 ~~~g~~r~~~~~~~~G~~~i~~af~~Ar~~dP~a~L~~Ndyn~e~~~~k~~~~~~~v~~l~~~G--vpi-dgiG~Q~H~~ 210 (327)
T 3u7b_A 134 NEDGTYRDSVFLRVIGEAYIPIAFRMALAADPTTKLYYNDYNLEYGNAKTEGAKRIARLVKSYG--LRI-DGIGLQAHMT 210 (327)
T ss_dssp CTTSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEESSCTTCSHHHHHHHHHHHHHHHTT--CCC-CEEEECCEEE
T ss_pred CCCCCccccchhhhccHHHHHHHHHHHHhHCCCCeEEeccccccCCchhhHHHHHHHHHHHHCC--CCc-ceEEEccccc
Confidence 54211 12354 46788999999999999999976442111 0 0111111 122 4566777887
Q ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC-----cchHHHHHHHHHHHHHCC--CceE
Q 008330 281 GFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN-----VNDNRYLNCFFGVAAELD--WDWA 353 (570)
Q Consensus 281 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~-----~~~~~~~~~~~~~~~~~g--igw~ 353 (570)
........ ...+ ....+.+.+++ +.+.|+||.|+|+.+....+. .....+++.++..+.++. .|-+
T Consensus 211 ~~~~~~~~-~~~p--~~~~~~~~l~~----~a~lGl~v~iTElDv~~~~p~~~~~~~~Qa~~y~~~~~~~~~~~~v~gIt 283 (327)
T 3u7b_A 211 SESTPTQN-TPTP--SRAKLASVLQG----LADLGVDVAYTELDIRMNTPATQQKLQTNADAYARIVGSCMDVKRCVGIT 283 (327)
T ss_dssp SSCCSSCC-SCCC--CHHHHHHHHHH----HHTTTCEEEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred cccccccc-CCCC--CHHHHHHHHHH----HHhcCCceEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 42111000 0001 12345555543 345899999999999763221 123466777777777653 4678
Q ss_pred EeccCceeecccC-ccCCCceeeeecCCCCC
Q 008330 354 LWTLVGSYYLREG-VIGLNEYYGLFDWNWCD 383 (570)
Q Consensus 354 ~W~~~G~y~~r~~-~~~~~et~Gll~~dw~~ 383 (570)
+|.+...|-.+.+ .++ ...-+|++.++..
T Consensus 284 ~WG~~D~~sW~~~~f~~-~~~~lLfD~~~~p 313 (327)
T 3u7b_A 284 VWGISDKYSWVPGTFPG-EGSALLWNDNFQK 313 (327)
T ss_dssp ESCSBGGGCSHHHHSTT-EECCSSBCTTSCB
T ss_pred EEccCcCCcccCCcCCC-CCCCCCCCCCCCC
Confidence 9987654433322 111 1234677877643
|
| >1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A | Back alignment and structure |
|---|
Probab=98.45 E-value=1.2e-07 Score=103.48 Aligned_cols=112 Identities=13% Similarity=0.045 Sum_probs=83.9
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++. +. -.-.++..++.++++|+.+.++||.
T Consensus 80 ~~eDi~lm~~~G~~~~R~sisWsRi~P~g----~~--------------------~g~~n~~G~~~y~~lid~l~~~GI~ 135 (512)
T 1v08_A 80 YKTDVRLLKEMGMDAYRFSISWPRILPKG----TK--------------------EGGINPDGIKYYRNLINLLLENGIE 135 (512)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHSTTS----ST--------------------TTCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHhCCCeEecccCHhhhCCCC----Cc--------------------CCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 68999999999999999999997665420 00 0224567899999999999999999
Q ss_pred EEEecCC-CCCCccccCCCCCCCCCCCC-CCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHI-SKPGWCCSNSDGNGFFGDQY-FNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~-~~~~w~~~~~dgng~~~d~~-~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
+||.+|+ +.|.|..... .+|.+.++ ...+.|.++.+.+++||+++ |..+.++|||.
T Consensus 136 p~vtL~H~d~P~~L~~~y--ggw~~r~~c~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 193 (512)
T 1v08_A 136 PYVTIFHWDVPQALEEKY--GGFLDKSHKSIVEDYTYFAKVCFDNFGDK--VKNWLTFNDPQ 193 (512)
T ss_dssp EEEEEESSCCBHHHHHHH--CGGGCTTSSHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred EEEEeCCCCCCHHHHhhC--CCCCCccccchHHHHHHHHHHHHHHhCCc--ceEEEEcccch
Confidence 9999854 4455532100 13333210 13688999999999999998 88899999995
|
| >3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus} | Back alignment and structure |
|---|
Probab=98.44 E-value=4.1e-07 Score=91.10 Aligned_cols=117 Identities=14% Similarity=0.086 Sum_probs=80.2
Q ss_pred ccceeeCCCCc-eeeeecCC----CCc-eecCCCCC---CCCccccCCc-----ceeecccceEEeecc----CCcccee
Q 008330 410 LHKVIYHPATG-LCVQRKSF----LDP-LTLGPCTE---SEAWSYTPHK-----TISLKGAYFCLQAKH----VGKPAKL 471 (570)
Q Consensus 410 ~~~~~~~~~tg-~c~~~~~~----~~~-~~~~~c~~---~~~W~~~~~~-----~~~~~~~~~cl~a~~----~g~~~~~ 471 (570)
-.+.|....|| +|+++.+. .++ +++++|.. +|+|..++.+ .|+-+.+++||++.+ +|.++.+
T Consensus 7 G~Y~I~N~~SGnKcLDV~g~STanGt~~Vqqw~c~nG~~nQqW~l~~~G~G~~Y~I~N~~SGKcLDV~g~sTadGa~V~q 86 (286)
T 3phz_A 7 GIYYIASAYVANTRLALSEDSSANKSPDVIISSDAVDPLNNLWLIEPVGEADTYTVRNAFAGSYMDLAGHAATDGTAIIG 86 (286)
T ss_dssp EEEEEEESSSTTEEEEECC----CCCCBEEEEETTCCCGGGCEEEEECSSTTEEEEEETTTCCEEEEGGGCCSTTEEEEE
T ss_pred cEEEEEEcCCCCeEEEcCCCCCCCCCceEEEEeCCCCChHHEEEEEECCCCcEEEEEECCCCcEEEeCCCcCCCCCeEEE
Confidence 35788899999 99999542 477 99999843 4899997554 244467999999987 4655554
Q ss_pred ccccC-CCCCceeEeec-cccEEEEecCCCceEEEeecC-----CCceeecceeeeCCCCCCCccCceEEEEe
Q 008330 472 GIICT-DCGSTWEIISD-SKMHLSSKADNGTTVCLDVDS-----SNTIVTNTCKCLSRDKTCDPASQWFKLVD 537 (570)
Q Consensus 472 ~~~c~-~~~~~W~~~s~-~~~~~~~~~~~~~~~cld~~~-----~~~~~~~~c~c~~~~~~~~~~~~~~~~~~ 537 (570)
++|. +++|+|++.+. +..+|.. ..+++|||+.+ ||.|+.+. +.+-.+..|| ++++
T Consensus 87 -W~~nGg~NQqW~l~~~~G~y~I~n---~~SGkcLDV~~gsttanGaV~qWt------~~tgg~NQqW-~~~~ 148 (286)
T 3phz_A 87 -YRPTGGDNQKWIISQINDVWKIKS---KETGTFVTLLNGDGGGTGTVVGWQ------NITNNTSQNW-TFQK 148 (286)
T ss_dssp -ECCCCCGGGCEEEEESSSCEEEEE---TTTCCEEEEETC---CCCEEEEES------CCCSSCTTCE-EEEE
T ss_pred -eCCCCChhcEEEEEcCCCeEEEEE---CCCCcEEEeCCCCcCCCceEEEcc------CCCCCccCcE-EEEE
Confidence 9998 78999999875 3334433 36889999742 45544455 1122455566 5544
|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=2.3e-07 Score=103.05 Aligned_cols=101 Identities=27% Similarity=0.477 Sum_probs=78.3
Q ss_pred cceeeCCCCceeeeecCC--CCceecCCCCC---------CCCccccCCcceee----cccceEEeeccCCccceecccc
Q 008330 411 HKVIYHPATGLCVQRKSF--LDPLTLGPCTE---------SEAWSYTPHKTISL----KGAYFCLQAKHVGKPAKLGIIC 475 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~--~~~~~~~~c~~---------~~~W~~~~~~~~~~----~~~~~cl~a~~~g~~~~~~~~c 475 (570)
+..+.++.+|+|+++.+. ..++.+++|.+ +|.|+++..+.|+. ...++||++.+.|.++.+ +.|
T Consensus 427 ~G~irn~~s~~CLD~~~~~~g~~v~l~~C~g~~~~~~~~~nQ~w~~t~~g~ir~~~~~~~~~~CLd~~~~g~~v~l-~~C 505 (570)
T 2d7i_A 427 WGEIRNVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFDAISHTSPVTL-YDC 505 (570)
T ss_dssp EEEEEETTTCCEECCCSCTTTCCCCEECCCTTCSCGGGCCCCCEEECTTSCEEESCTTSCCSBCCBCCSSSSBCBC-CBC
T ss_pred cceeeecccCccccccCCCCCCeEEEEECCCCCcCCCCCCCceEEEecCCceeecccccCCCcceeecCCCCeEEE-EeC
Confidence 356778889999998543 36699999987 37999999998876 467899999998888888 999
Q ss_pred C--CCCCceeEeeccccEEEEecCCCceEEEeecCCC-ceeecce
Q 008330 476 T--DCGSTWEIISDSKMHLSSKADNGTTVCLDVDSSN-TIVTNTC 517 (570)
Q Consensus 476 ~--~~~~~W~~~s~~~~~~~~~~~~~~~~cld~~~~~-~~~~~~c 517 (570)
. +.+|+|+...++.+ ....+++|||+..+| .++.+.|
T Consensus 506 ~~~~~nQ~W~~~~~g~i-----~~~~sg~CLd~~~~~~~v~l~~C 545 (570)
T 2d7i_A 506 HSMKGNQLWKYRKDKTL-----YHPVSGSCMDCSESDHRIFMNTC 545 (570)
T ss_dssp CSSSSTTCCEECTTSCE-----EBTTTTBEEEECTTTCCEEEECC
T ss_pred CCCCcCCeEEECCCCcE-----EeCCCCeeEeeeCCCCeEEEEeC
Confidence 8 46899999755543 223578999998644 5555655
|
| >2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* | Back alignment and structure |
|---|
Probab=98.40 E-value=2.7e-07 Score=99.75 Aligned_cols=109 Identities=16% Similarity=0.144 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 77 PMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
..+++++.|+++|+|++|+.++|..+.++. ...-.+...++.++++|+.+.++||
T Consensus 58 ~~~eDi~lm~~~G~~~~R~sisWsRi~P~g-------------------------~~g~~n~~Gl~~y~~lid~l~~~GI 112 (469)
T 2e9l_A 58 LWEEDLKCIKQLGLTHYRFSLSWSRLLPDG-------------------------TTGFINQKGIDYYNKIIDDLLKNGV 112 (469)
T ss_dssp CHHHHHHHHHHHTCSEEEEECCHHHHSTTS-------------------------STTSCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCeEEccccHhhcccCC-------------------------CCCCcCHHHHHHHHHHHHHHHHcCC
Confidence 368999999999999999999997665420 0022456789999999999999999
Q ss_pred EEEEec-CCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 157 MVILDN-HISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 157 ~VILD~-H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.+||.+ |.+.|.|.... .+|.+.. ..+.|.++-+.+++||++. |..+-.+|||.
T Consensus 113 ~p~vtL~H~d~P~~l~~~---ggw~~r~--~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 167 (469)
T 2e9l_A 113 TPIVTLYHFDLPQTLEDQ---GGWLSEA--IIESFDKYAQFCFSTFGDR--VKQWITINEAN 167 (469)
T ss_dssp EEEEEEESSCCBHHHHHT---TGGGSTH--HHHHHHHHHHHHHHHHTTT--CCEEEEESCHH
T ss_pred EEEEEeCCCCCCcchhhc---CCCCCch--HHHHHHHHHHHHHHHhcCc--CCEEEEccCcc
Confidence 999998 55556564322 2444332 4688999999999999988 77899999995
|
| >3c9z_A Agglutinin II, SNA-II; beta-trefoil, ricin-B domain, glycosylation, glycoprotein, L sugar binding protein, plant protein; HET: NAG FUC SO4; 1.35A {Sambucus nigra} PDB: 3ca0_A* 3ca1_A* 3ca3_A* 3ca4_A* 3ca5_A* 3ca6_A* 3cah_A* 1hwm_B* 1hwn_B* 1hwo_B* 1hwp_B* | Back alignment and structure |
|---|
Probab=98.40 E-value=3.3e-07 Score=91.37 Aligned_cols=99 Identities=21% Similarity=0.454 Sum_probs=74.1
Q ss_pred ccceeeCCCCceeeeecCC----CCceecCCCCCC--CCccccCCcceeecccceEEeecc--CCccceeccccCC---C
Q 008330 410 LHKVIYHPATGLCVQRKSF----LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICTD---C 478 (570)
Q Consensus 410 ~~~~~~~~~tg~c~~~~~~----~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~~---~ 478 (570)
+++.+... +|+|+++.+. ..++.+++|.++ ++|.++.++.|+ .+++||++.| .|.++.+ ++|.+ .
T Consensus 3 ~~~~i~~~-sg~cldv~~~~~~~g~~v~~~~c~~~~~Q~w~~~~~g~ir--~~g~CLd~~g~~~g~~v~~-~~c~~~~~~ 78 (258)
T 3c9z_A 3 FTRNIVGR-DGLCVDVRNGYDTDGTPLQLWPCGTQRNQRWTFDSDDTIR--SMGKCMTANGLNNGSNIVI-FNCSTAAEN 78 (258)
T ss_dssp EEEEEECG-GGCEEEEGGGCCSTTCBEEEECCCCCGGGCEEECTTSCEE--ETTEEEEEESSSTTCEEEE-ECTTTSCGG
T ss_pred ceEEEECC-CCCeEECCCCCCCCCcEEEEECCCCChhccEEEcCCCeEE--ECCeEEcccCCCCCCEEEE-EeCCCCCCc
Confidence 34566666 9999999542 367999999875 799999988875 4789999987 5776666 99995 7
Q ss_pred CCceeEeeccccEEEEecCCCceEEEeecC--CC-ceeecce
Q 008330 479 GSTWEIISDSKMHLSSKADNGTTVCLDVDS--SN-TIVTNTC 517 (570)
Q Consensus 479 ~~~W~~~s~~~~~~~~~~~~~~~~cld~~~--~~-~~~~~~c 517 (570)
+|+|++..++.+ ....+++|||+.+ +| .++.+.|
T Consensus 79 ~Q~W~~~~~g~i-----~n~~sg~cLd~~~~~~g~~v~~~~c 115 (258)
T 3c9z_A 79 AIKWEVPIDGSI-----INPSSGLVMTAPRAASRTILLLEDN 115 (258)
T ss_dssp GSCCBCCTTSCC-----BCTTTCCEEECSSSSTTCBCEEECC
T ss_pred CCEEEEcCCCeE-----EECCCCcEEecCCCCCCcceEEEcc
Confidence 899999877643 2335789999974 44 4554655
|
| >2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B* | Back alignment and structure |
|---|
Probab=98.37 E-value=6.5e-07 Score=89.52 Aligned_cols=99 Identities=22% Similarity=0.376 Sum_probs=74.3
Q ss_pred ccceeeCCCCceeeeecCC----CCceecCCC--CCC--CCccccCCcceeecccceEEeecc--CCccceeccccCC--
Q 008330 410 LHKVIYHPATGLCVQRKSF----LDPLTLGPC--TES--EAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICTD-- 477 (570)
Q Consensus 410 ~~~~~~~~~tg~c~~~~~~----~~~~~~~~c--~~~--~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~~-- 477 (570)
|...|... +|+|+++.+. ..++.+++| +++ ++|.++.++.|+. .++||++.| +|.++.+ ++|.+
T Consensus 9 ~~~~i~~~-sg~cldv~~~~~~~g~~v~~~~c~~~~~~~Q~W~~~~~g~ir~--~g~cLdv~g~~~g~~v~~-~~c~~~~ 84 (262)
T 2aai_B 9 PIVRIVGR-NGLCVDVRDGRFHNGNAIQLWPCKSNTDANQLWTLKRDNTIRS--NGKCLTTYGYSPGVYVMI-YDCNTAA 84 (262)
T ss_dssp CEECEECG-GGCEEEEGGGCCSTTCBEEEECCCSSCCGGGCEEECTTSBEEE--TTEEEEESCSSTTCBEEE-EETTTSC
T ss_pred CeEEEEcC-CCceEEcCCCCCCCCCEEEEeeCCCCCChhceEEEeCCceEEE--CCEEEeccCCCCCCEEEE-EeCCCCC
Confidence 45566665 9999998532 367999999 554 7999999888765 689999976 4666666 99985
Q ss_pred -CCCceeEeeccccEEEEecCCCceEEEeecC--CC-ceeecce
Q 008330 478 -CGSTWEIISDSKMHLSSKADNGTTVCLDVDS--SN-TIVTNTC 517 (570)
Q Consensus 478 -~~~~W~~~s~~~~~~~~~~~~~~~~cld~~~--~~-~~~~~~c 517 (570)
.+|+|++..++. |... .+++|||+.+ +| .++.+.|
T Consensus 85 ~~~Q~W~~~~~G~--i~n~---~sg~cLd~~~~~~g~~v~~~~c 123 (262)
T 2aai_B 85 TDATRWQIWDNGT--IINP---RSSLVLAATSGNSGTTLTVQTN 123 (262)
T ss_dssp GGGSBCEECTTSC--EEEE---TTEEEEECSSCSTTCBCEEEEC
T ss_pred CccceEEEcCCCC--EEeC---CCCceEecCCCCCCceeEEEec
Confidence 689999987765 4333 5789999974 44 5555777
|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
Probab=98.35 E-value=2.8e-07 Score=100.95 Aligned_cols=114 Identities=13% Similarity=0.199 Sum_probs=81.2
Q ss_pred ChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 76 QPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
...+++++.||++|+|+||+++.|..+++. .|..++ ++.++++|+.|.++|
T Consensus 29 ~~w~~dl~~mk~~Gln~Vr~~V~W~~iEP~--------------------------g~G~yd---f~~~d~~id~a~~~G 79 (516)
T 1vem_A 29 ETFENDLRWAKQNGFYAITVDFWWGDMEKN--------------------------GDQQFD---FSYAQRFAQSVKNAG 79 (516)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEEHHHHTCS--------------------------STTCCC---CHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEEecchhhccCC--------------------------CCCccc---hHHHHHHHHHHHHCC
Confidence 347899999999999999999988766541 022223 456889999999999
Q ss_pred CEEE--EecCCC-----------CCCccccCCC--------CCCC--------CCCCCCCHHHHHHHHHHHHHHhCCCCc
Q 008330 156 VMVI--LDNHIS-----------KPGWCCSNSD--------GNGF--------FGDQYFNPDLWIKGLTKMATIFNGVRN 206 (570)
Q Consensus 156 l~VI--LD~H~~-----------~~~w~~~~~d--------gng~--------~~d~~~~~~~~~~~w~~iA~ryk~~p~ 206 (570)
|+|| |+.|.. .|.|...... ..|. |.+. ...+.|.++++.+++||+++++
T Consensus 80 L~viv~L~~h~c~g~~g~~~~~~lP~WL~~~~p~~di~~~d~~G~~~~~~~~~~~~~-~~~~~y~~~~~~la~r~~~~~~ 158 (516)
T 1vem_A 80 MKMIPIISTHQCGGNVGDDCNVPIPSWVWNQKSDDSLYFKSETGTVNKETLNPLASD-VIRKEYGELYTAFAAAMKPYKD 158 (516)
T ss_dssp CEEEEEEECSCBSSSTTCCCCBCCCGGGGGGCSSSCSSEECTTCCEECSSCCTTCHH-HHHHHHHHHHHHHHHHTGGGGG
T ss_pred CEEEEEecccccCCCcCCCCCCCCCHHHHhcCCccceeeECCCCCCCcccccccccC-ccHHHHHHHHHHHHHHHccCCC
Confidence 9999 999743 3455422100 0111 1111 1347889999999999999999
Q ss_pred EEE----------------EeccCCCCCC
Q 008330 207 VVG----------------MSLRNELRGP 219 (570)
Q Consensus 207 Vig----------------~dL~NEP~~~ 219 (570)
||+ +.+-||...+
T Consensus 159 vI~eI~vglG~~GelryPs~qv~NE~g~~ 187 (516)
T 1vem_A 159 VIAKIYLSGGPAGELRYPSYTTSDGTGYP 187 (516)
T ss_dssp GBCCEEECCSGGGBSSCCCCCTTTTCCTT
T ss_pred EEEEeeccccccccccccccccccCcCCC
Confidence 998 8899997543
|
| >1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=98.35 E-value=4.5e-07 Score=97.85 Aligned_cols=108 Identities=12% Similarity=0.083 Sum_probs=84.3
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++. ...-.+...++.++++|+.+.++||.
T Consensus 61 ~~eDi~lm~~~G~~~~R~sisWsRi~P~g-------------------------~~g~~n~~Gl~~y~~~id~l~~~GI~ 115 (464)
T 1wcg_A 61 YKEDVAIIKDLNLKFYRFSISWARIAPSG-------------------------VMNSLEPKGIAYYNNLINELIKNDII 115 (464)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSTTS-------------------------CTTSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHhCCCeEEecccHHHhCCCC-------------------------CCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 58999999999999999999997665420 00224567899999999999999999
Q ss_pred EEEecCC-CCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHI-SKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~-~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
+||.+++ +.|.|... -.+|.+ + ...+.|.++-+.+++||++. |..+-.+|||.
T Consensus 116 p~vtL~H~d~P~~L~~---~ggw~~-r-~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 169 (464)
T 1wcg_A 116 PLVTMYHWDLPQYLQD---LGGWVN-P-IMSDYFKEYARVLFTYFGDR--VKWWITFNEPI 169 (464)
T ss_dssp EEEEEESSCCBHHHHH---TTGGGS-T-THHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred EEEEeCCCCCCcchhh---cCCCCC-h-hHHHHHHHHHHHHHHHhCCc--CcEEEEccccc
Confidence 9999854 45655432 114443 3 24788999999999999988 77899999995
|
| >4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A | Back alignment and structure |
|---|
Probab=98.34 E-value=1.5e-05 Score=86.83 Aligned_cols=164 Identities=13% Similarity=0.105 Sum_probs=96.7
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhc-----cCcccCCCCCCCchHHHHHHHHHHHHh
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAI-----GGIQSNNPSIVDLPLIKAFQAVVASLG 152 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~-----~g~~~~nP~~~~~t~l~~ld~vV~~a~ 152 (570)
.+++++.|++||+|+-|+.++|.-+.++...+..+.... -|. +.. .|....--...|+..++.++++|+++.
T Consensus 63 y~eDi~l~~~mG~~~yRfSIsWsRI~P~G~~~~~~~~e~--~gd-~~~~~~~~~g~~~~~~~~~N~~Gl~fY~~lid~Ll 139 (489)
T 4ha4_A 63 YRKFHDAAQAMGLTAARIGVEWSRIFPRPTFDVKVDAEV--KGD-DVLSVYVSEGALEQLDKMANRDAINHYREMFSDLR 139 (489)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHCSSCCTTSCCEEEE--ETT-EEEEEECCHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeeccHHhcCcCCCccccccccc--ccc-cccccccccccccccccCCCHHHHHHHHHHHHHHH
Confidence 588999999999999999999977665311000000000 000 000 000000000125678999999999999
Q ss_pred cCCCEEEEecCCCC-CCccccC--------CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCC----
Q 008330 153 NNNVMVILDNHISK-PGWCCSN--------SDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP---- 219 (570)
Q Consensus 153 ~~Gl~VILD~H~~~-~~w~~~~--------~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~---- 219 (570)
++||..||.+||.. |.|..+. ..-.||-+.. ..+.|.++-+.+.+||++.-. -+=.+|||...
T Consensus 140 ~~GIeP~VTL~H~DlP~~L~d~~~~~~g~~~~~GGW~n~~--~v~~F~~YA~~~f~~fgdrVk--~W~T~NEp~~~~~~g 215 (489)
T 4ha4_A 140 SRGITFILNLYHWPLPLWLHDPIAIRRGNLSAPSGWLDVR--TVIEFAKFSAYVAWKLDDLVY--MYSTMNEPNVVWGLG 215 (489)
T ss_dssp HTTCEEEEESCSSCCBTTTBCHHHHHTTCTTSCBGGGSHH--HHHHHHHHHHHHHHHHGGGCS--EEEEEECHHHHHHHH
T ss_pred HcCCeeeEeecCCCchHHHhhhhcccccccccCCCCCCHH--HHHHHHHHHHHHHHHhCCccc--eEEEeccchhhhccc
Confidence 99999999998754 6554210 0012444322 367889999999999998733 24578998421
Q ss_pred ----------C-CChhH-------HHHHHHHHHHHHHhcCCCcEEEE
Q 008330 220 ----------K-QNVKD-------WYRYMQLGAEAVHAANPEVLVIL 248 (570)
Q Consensus 220 ----------~-~~~~~-------W~~~~~~~~~aIr~~dp~~lIiV 248 (570)
. ..... ......++++++|++.+..+-++
T Consensus 216 y~~~~~~~~p~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~~iGi~ 262 (489)
T 4ha4_A 216 YAAVKSGFPPGYLCLECAGRAMKNLVQAHARAYDAVKAITKKPVGVI 262 (489)
T ss_dssp HTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred ccccccCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCceeEE
Confidence 0 11111 12233467788899888754333
|
| >1abr_B Abrin-A; glycosidase/carbohydrate complex, lectin, lectin (agglutinin), glycoprotein, plant SEED protein, plant toxin; HET: NDG NGZ MAN BMA BGC; 2.14A {Abrus precatorius} SCOP: b.42.2.1 b.42.2.1 PDB: 2zr1_B* 2q3n_B* | Back alignment and structure |
|---|
Probab=98.34 E-value=6.7e-07 Score=89.67 Aligned_cols=99 Identities=21% Similarity=0.341 Sum_probs=74.2
Q ss_pred ccceeeCCCCceeeeecCC----CCceecCCC--CC--CCCccccCCcceeecccceEEeecc--CCccceeccccCC--
Q 008330 410 LHKVIYHPATGLCVQRKSF----LDPLTLGPC--TE--SEAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICTD-- 477 (570)
Q Consensus 410 ~~~~~~~~~tg~c~~~~~~----~~~~~~~~c--~~--~~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~~-- 477 (570)
++..+... +|+|+++.+. ..++.+++| +. +++|.++.++.|+ ..++||++.| +|.++.+ ++|.+
T Consensus 14 ~~~~i~~~-sg~CLDv~~~~~~~g~~v~~~~c~~~~~~~Q~w~~~~~g~ir--~~g~CLdv~g~~~g~~v~~-~~c~~~~ 89 (267)
T 1abr_B 14 PTVRIGGR-DGMCVDVYDNGYHNGNRIIMWKCKDRLEENQLWTLKSDKTIR--SNGKCLTTYGYAPGSYVMI-YDCTSAV 89 (267)
T ss_dssp CEECEECG-GGCEEEEGGGCCSTTCBEEEECCCSSCCGGGCEEECTTSBEE--ETTEEEEESCSSTTCBEEE-ECTTTSC
T ss_pred CeEEEEcC-CCCEEECCCCCCCCCcEEEEEecCCCCChhcEEEEccCceEE--ECCEEEcccCCCCCCEEEE-EeCCCCC
Confidence 45566666 9999999541 367999999 54 3799999988776 4679999976 5777666 99995
Q ss_pred -CCCceeEeeccccEEEEecCCCceEEEeecC--CC-ceeecce
Q 008330 478 -CGSTWEIISDSKMHLSSKADNGTTVCLDVDS--SN-TIVTNTC 517 (570)
Q Consensus 478 -~~~~W~~~s~~~~~~~~~~~~~~~~cld~~~--~~-~~~~~~c 517 (570)
.+|+|++..++.+ .. ..+++|||+.+ +| .++.+.|
T Consensus 90 ~~~Q~W~~~~~G~i--~n---~~sg~cLd~~~~~~g~~v~~~~c 128 (267)
T 1abr_B 90 AEATYWEIWDNGTI--IN---PKSALVLSAESSSMGGTLTVQTN 128 (267)
T ss_dssp GGGSBCEECTTSCE--EE---TTTTEEEECCCSSTTCBCEEECC
T ss_pred CccCEEEEecCCcE--Ee---CCCCcEEeccCCCCCcEEEEEeC
Confidence 7899999877653 22 25789999974 44 5555776
|
| >1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A | Back alignment and structure |
|---|
Probab=98.31 E-value=3.6e-05 Score=83.73 Aligned_cols=128 Identities=14% Similarity=0.189 Sum_probs=83.1
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccC--C-------CCCCCchHHHHHHHHH
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSN--N-------PSIVDLPLIKAFQAVV 148 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~--n-------P~~~~~t~l~~ld~vV 148 (570)
.+++++.|++||+|+-|+.++|.-+.++...+.. .++ +....+... | -...++..++.++++|
T Consensus 63 y~eDi~l~~elG~~~yRfSIsWsRI~P~G~~~~~---~~~-----~~~~~~~~~e~~e~~~~~~~~~~N~~Gl~fY~~li 134 (489)
T 1uwi_A 63 YKTFHNNAQKMGLKIARLNSEWSRQFPNPLPRPQ---NFD-----ESKQDVTEVEINENELKRLDEYANKDALNHYREIF 134 (489)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHCCSCCCCCT---TCC-----TTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCcHHHCCCCCCcccc---ccc-----cccccccccccccccccccccCCCHHHHHHHHHHH
Confidence 5899999999999999999999776653110000 000 000000000 0 0224678999999999
Q ss_pred HHHhcCCCEEEEecCCCC-CCccccC--------CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 149 ASLGNNNVMVILDNHISK-PGWCCSN--------SDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 149 ~~a~~~Gl~VILD~H~~~-~~w~~~~--------~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
+++.++||..||.+||.. |.|.... ....||-+.. ..+.|.++-+.+.++|++.-. -+=.+|||.
T Consensus 135 d~Ll~~GIeP~VTL~H~DlP~~L~d~y~~~~g~~~~~GGW~n~~--~v~~F~~YA~~~f~~fgdrVk--~W~T~NEp~ 208 (489)
T 1uwi_A 135 KDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTR--TVYEFARFSAYTAWKFDDLVD--EYSTMNEPN 208 (489)
T ss_dssp HHHHHTTCEEEEESCCSCCBGGGBCHHHHHTTCCSSCBGGGSHH--HHHHHHHHHHHHHHHHTTTCS--EEEEEECHH
T ss_pred HHHHHcCCcceEEeecCCccHHHHHhhhhcccccccCCCcCCHH--HHHHHHHHHHHHHHHhCCccC--eEEEecCch
Confidence 999999999999998754 5554210 0012444332 367889999999999999733 245789994
|
| >2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=3.8e-07 Score=100.25 Aligned_cols=107 Identities=19% Similarity=0.155 Sum_probs=83.4
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCC-CCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNP-SIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP-~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
.+++++.|+++|+|++|+.++|..+.++ + .-.++..++.++++|+.+.++||
T Consensus 130 y~eDi~lm~~lG~~~~RfsIsWsRI~P~---------------------------g~g~~n~~Gl~~Y~~lid~l~~~GI 182 (565)
T 2dga_A 130 YEEDVKALKDMGMKVYRFSISWSRILPD---------------------------GTGKVNQAGIDYYNKLINSLIDNDI 182 (565)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHCTT---------------------------SSSSCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCeEEecccHHHhccC---------------------------CCCCcCHHHHHHHHHHHHHHHHCCC
Confidence 5899999999999999999999766542 1 22456789999999999999999
Q ss_pred EEEEec-CCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 157 MVILDN-HISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 157 ~VILD~-H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.+||.+ |...|.|..... .+|. ++ ...+.|.++-+.+++||++. |..+-.+|||.
T Consensus 183 ~p~vtL~H~d~P~~L~~~y--ggw~-~r-~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~ 238 (565)
T 2dga_A 183 VPYVTIWHWDTPQALEDKY--GGFL-NR-QIVDDYKQFAEVCFKNFGDR--VKNWFTFNEPH 238 (565)
T ss_dssp EEEEEEESSCCBHHHHHHH--CGGG-ST-HHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred EEEEEeCCCCCcHHHHHhc--CCCC-Cc-hHHHHHHHHHHHHHHHhCCC--CceEEEeccch
Confidence 999997 555555532100 1333 33 24688999999999999988 77899999995
|
| >1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=98.28 E-value=6e-07 Score=97.52 Aligned_cols=110 Identities=14% Similarity=0.044 Sum_probs=83.7
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++. +.. .-.++..++.++++|+.+.++||.
T Consensus 75 ~~eDi~lm~~~G~~~~R~sisWsRi~P~g----~~~--------------------g~~n~~G~~~y~~lid~l~~~GI~ 130 (490)
T 1cbg_A 75 YKEDIGIMKDMNLDAYRFSISWPRVLPKG----KLS--------------------GGVNREGINYYNNLINEVLANGMQ 130 (490)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHSTTS----SGG--------------------GCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHhCCCeEEecccHHHhCCCC----CcC--------------------CCcCHHHHHHHHHHHHHHHHcCCE
Confidence 58999999999999999999997765520 000 123567899999999999999999
Q ss_pred EEEecCC-CCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHI-SKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~-~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
+||.+++ +.|.|..... .+|.+.. ..+.|.++-+.+++||++. |..+-.+|||.
T Consensus 131 p~vtL~H~d~P~~L~~~y--ggw~~~~--~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 185 (490)
T 1cbg_A 131 PYVTLFHWDVPQALEDEY--RGFLGRN--IVDDFRDYAELCFKEFGDR--VKHWITLNEPW 185 (490)
T ss_dssp EEEEEESSCCBHHHHHHH--CGGGSTT--HHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred EEEEeCCCCCCHhHHhhc--CCcCCch--HHHHHHHHHHHHHHHhCCc--ceEEEEccCch
Confidence 9999754 4555532100 1444332 4788999999999999988 77899999996
|
| >3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=1.4e-06 Score=88.38 Aligned_cols=120 Identities=13% Similarity=0.057 Sum_probs=84.3
Q ss_pred cceeeCCCCceeeeecCC----CCceecCCCC-----CCCCccccC----Cc--ceeecccceEEeeccC----Ccccee
Q 008330 411 HKVIYHPATGLCVQRKSF----LDPLTLGPCT-----ESEAWSYTP----HK--TISLKGAYFCLQAKHV----GKPAKL 471 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~----~~~~~~~~c~-----~~~~W~~~~----~~--~~~~~~~~~cl~a~~~----g~~~~~ 471 (570)
.+.|....||+|+++.+. .+++.+++|. .+|+|..++ ++ .|+-+.+++||++.+. |.++.+
T Consensus 7 ~Y~I~N~~SGk~LDV~g~stanGa~Vqqw~~~g~ng~~nQqW~~~~~~G~~G~Y~I~n~~SGkcLDV~~~stanGt~V~q 86 (293)
T 3ef2_A 7 IYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNG 86 (293)
T ss_dssp EEEEEESSSSCEEEEGGGCCSTTEEEEEECCCTTSCCTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCSTTEEEEE
T ss_pred EEEEEECCCCCEEEcCCCCCCCCcEEEEeecCCCCCCccEEEEEeeccCCCceEEEEECCCCCEEecCCCCCCCCCEEEE
Confidence 577888999999999542 3579999965 358999976 23 3544679999999863 665555
Q ss_pred ccc----cCCCCCceeEeec-c--ccEEEEecCCCceEEEeecC----CC-ceeeccee-eeCCCCCCCccCceEEEEec
Q 008330 472 GII----CTDCGSTWEIISD-S--KMHLSSKADNGTTVCLDVDS----SN-TIVTNTCK-CLSRDKTCDPASQWFKLVDS 538 (570)
Q Consensus 472 ~~~----c~~~~~~W~~~s~-~--~~~~~~~~~~~~~~cld~~~----~~-~~~~~~c~-c~~~~~~~~~~~~~~~~~~~ 538 (570)
++ |++.+|+|++... + ..+|..+ .+++|||+.+ +| +|+.+.|. |-.. ..|=|++++.
T Consensus 87 -w~~~~~~~g~nQqW~l~~~~g~G~y~I~n~---~SGk~LDV~g~stanGt~V~qw~~~~~~g~------~nQqW~l~~~ 156 (293)
T 3ef2_A 87 -WQGTAFTTNPHQLWTIKKSSDGTSYKIQNY---GSKTFVDLVNGDSSDGAKIAGWTGTWDEGN------PHQKWYFNRM 156 (293)
T ss_dssp -ECCCTTCCCGGGCEEEEECTTSSSEEEEET---TTCCEEEEGGGCCSTTEEEEEECCCSSCCC------GGGCEEEEEC
T ss_pred -eccCCCCCCCCcEEEEEEeCCCCEEEEEEC---CCCcEEEeCCCCCCCCCEEEEEeccCCCCC------cccEEEEEec
Confidence 66 8888999999887 2 3355433 6789999962 56 66668743 4322 3466678775
Q ss_pred cC
Q 008330 539 TR 540 (570)
Q Consensus 539 ~~ 540 (570)
..
T Consensus 157 s~ 158 (293)
T 3ef2_A 157 SV 158 (293)
T ss_dssp EE
T ss_pred CC
Confidence 43
|
| >1ggp_B TKL-1, protein (lectin 1 B chain); sugar binding protein; 2.70A {Trichosanthes kirilowii} SCOP: b.42.2.1 b.42.2.1 | Back alignment and structure |
|---|
Probab=98.27 E-value=4.7e-07 Score=90.16 Aligned_cols=99 Identities=21% Similarity=0.328 Sum_probs=73.2
Q ss_pred ccceeeCCCCceeeeecCC---CCceecCCCCCC--CCccccCCcceeecccceEEeeccC-CccceeccccCC---CCC
Q 008330 410 LHKVIYHPATGLCVQRKSF---LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKHV-GKPAKLGIICTD---CGS 480 (570)
Q Consensus 410 ~~~~~~~~~tg~c~~~~~~---~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~~-g~~~~~~~~c~~---~~~ 480 (570)
+.+.+.. .+|+|+++... ..++.+++|.++ ++|+++.++.|+. .++||++.|. |.++.+ ++|.+ .+|
T Consensus 4 ~~~~i~~-~sg~ClDv~~~~~~g~~v~~~~c~g~~nQ~w~~~~~g~ir~--~g~CLdv~g~~g~~v~~-~~c~~~~~~~Q 79 (254)
T 1ggp_B 4 ATVRIAG-RDGFCADVNGEGQNGAAIILKKCAENDNQLWTLKREATIRS--NGGCLTTAAAEQAKAGI-YDCTQATAELS 79 (254)
T ss_dssp EEEEEEC-GGGEEEEESSSCCSSCBEEEEECCCCTTTEEEEETTSCCBS--SSSEEEEECSSSCEEEE-ECTTTSCHHHH
T ss_pred ceEEEEC-CCCceEeCCCCcCCCcEEEEEcCCCCccceEEEcCCCeEEE--CceEEeccCCCCCEEEE-EECCCCCCcCC
Confidence 3455666 89999999221 357999999875 7999999887764 5799999875 776666 99985 689
Q ss_pred ceeEeeccccEEEEecCCCceEEEeecC--CC-ceeecce
Q 008330 481 TWEIISDSKMHLSSKADNGTTVCLDVDS--SN-TIVTNTC 517 (570)
Q Consensus 481 ~W~~~s~~~~~~~~~~~~~~~~cld~~~--~~-~~~~~~c 517 (570)
+|++..++.+ . ...+++|||+.+ +| .++.+.|
T Consensus 80 ~W~~~~~g~i--~---n~~sg~cLd~~~~~~g~~v~~~~c 114 (254)
T 1ggp_B 80 AWEIADNGTI--I---NPASSLVLSSGAANSLLDLGVQTN 114 (254)
T ss_dssp CCEECTTSCE--E---ETTTTEEEECSSSCTTEECEEECC
T ss_pred EEEEecCCCE--E---eCCCCeEEeCCCCCCCCEEEEEec
Confidence 9999877753 2 235789999974 44 4444655
|
| >1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=7.9e-07 Score=96.79 Aligned_cols=111 Identities=12% Similarity=0.009 Sum_probs=84.1
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++. +++ .-.+...++.++++|+.+.++||.
T Consensus 79 ~~eDi~lm~~lG~~~~R~sisWsRi~P~g----~~~--------------------g~~n~~G~~~y~~~id~l~~~GI~ 134 (501)
T 1e4m_M 79 WQKDIDVLDELNATGYRFSIAWSRIIPRG----KRS--------------------RGVNEKGIDYYHGLISGLIKKGIT 134 (501)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHCTTS----SGG--------------------GCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHhCCCeEEccccHHhhccCC----CCC--------------------CCcCHHHHHHHHHHHHHHHHcCCE
Confidence 68999999999999999999997765520 000 123567899999999999999999
Q ss_pred EEEecCC-CCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCC
Q 008330 158 VILDNHI-SKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218 (570)
Q Consensus 158 VILD~H~-~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~ 218 (570)
+||.+++ +.|.|..... .+|.+.. ..+.|.++-+.+++||++. |..+-.+|||..
T Consensus 135 p~vtL~H~d~P~~L~~~y--ggw~~r~--~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~~ 190 (501)
T 1e4m_M 135 PFVTLFHWDLPQTLQDEY--EGFLDPQ--IIDDFKDYADLCFEEFGDS--VKYWLTINQLYS 190 (501)
T ss_dssp EEEEEESSCCBHHHHHHH--CGGGSTH--HHHHHHHHHHHHHHHHTTT--CCEEEEESCTTH
T ss_pred EEEEeCCCcCCHHHHHhc--CCCCCch--HHHHHHHHHHHHHHHhCCC--CCEEEEecCchh
Confidence 9999855 4455532100 1443332 4688999999999999988 778999999973
|
| >1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=6.4e-07 Score=98.57 Aligned_cols=110 Identities=12% Similarity=0.090 Sum_probs=83.3
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++. .. ..-.++..++.++++|+.+.++||.
T Consensus 132 y~eDi~lm~~lG~~~~R~sisWsRi~P~g----~~--------------------~g~~n~~G~~~Y~~lid~l~~~GI~ 187 (565)
T 1v02_A 132 YAEDVRLLKEMGMDAYRFSISWPRILPKG----TL--------------------AGGINEKRVEYYNKLIDLLLENGIE 187 (565)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHSTTS----SS--------------------TTCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHhCCCeEEcccCHHHhCCCC----Cc--------------------CCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 58999999999999999999997665420 00 0123567899999999999999999
Q ss_pred EEEecC-CCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNH-ISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H-~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
+||.++ .+.|.|..... .+|.+.. ..+.|.++-+.+++||++. |..+-.+|||.
T Consensus 188 p~vtL~H~d~P~~L~~~y--ggw~~r~--~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 242 (565)
T 1v02_A 188 PYITIFHWDTPQALVDAY--GGFLDER--IIKDYTDFAKVCFEKFGKT--VKNWLTFNEPE 242 (565)
T ss_dssp EEEEEESSCCBHHHHHHH--CGGGSTH--HHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred EEEEeCCCCCCHHHHhhc--CCCCCch--HHHHHHHHHHHHHHHhCCc--ceEEEEccCch
Confidence 999975 45555532100 1333322 4688999999999999988 77899999995
|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.2e-05 Score=83.34 Aligned_cols=218 Identities=12% Similarity=0.116 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHhcCCCEEE---EecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 141 IKAFQAVVASLGNNNVMVI---LDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VI---LD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
+...|++|++|.++||.|. |-.|...|.|.... . +. ...-.+.+.++.+.+++||++. |..+|+.|||.
T Consensus 64 f~~aD~~v~~a~~~gi~vrGHtLvWh~q~P~W~~~~----~-~~-~~~l~~~~~~~I~~v~~rY~g~--i~~WDVvNE~~ 135 (335)
T 4f8x_A 64 FTEGEQFLEVAERFGSKVRCHNLVWASQVSDFVTSK----T-WT-AKELTAVMKNHIFKTVQHFGRR--CYSWDVVNEAL 135 (335)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSSSCCHHHHTS----C-CC-HHHHHHHHHHHHHHHHHHHGGG--CSEEEEEESCB
T ss_pred cchhHHHHHHHHHCCCEEEEeeecccccCcHHHhcC----C-CC-HHHHHHHHHHHHHHHHHHhCCC--ceEEEEecCcc
Confidence 4568999999999999985 55687778775421 0 10 0011456678889999999984 88899999996
Q ss_pred CCCCC--hhHHH-----HHHHHHHHHHHhc-----CCCcEEEEeCCCCCCc-------c---hhhhhcccCcCCCCCEEE
Q 008330 218 GPKQN--VKDWY-----RYMQLGAEAVHAA-----NPEVLVILSGLNFDKD-------L---SFVRNQAVNLTFTGKLVF 275 (570)
Q Consensus 218 ~~~~~--~~~W~-----~~~~~~~~aIr~~-----dp~~lIiVeG~~w~~d-------l---~~~~~~p~~l~~~~nlVy 275 (570)
...+. ...|+ .|+..+.++.|++ +|+..+++-..+-... + ..+.... ++. +-+=+
T Consensus 136 ~~~g~~r~s~~~~~lG~~~i~~aF~~Ar~a~~~~~dP~a~L~~NDYn~e~~~~k~~~~~~lv~~l~~~g--vpi-dgiG~ 212 (335)
T 4f8x_A 136 NGDGTFSSSVWYDTIGEEYFYLAFKYAQEALAQIGANDVKLYYNDYGIENPGTKSTAVLQLVSNLRKRG--IRI-DGVGL 212 (335)
T ss_dssp CTTSSBCCCHHHHHHCTHHHHHHHHHHHHHHHHTTCTTSEEEEEESSCSSSSHHHHHHHHHHHHHHHTT--CCC-CEEEE
T ss_pred CCCCccccCchhhhcCHHHHHHHHHHHHHhccccCCCCcEEEEecccccCCcHhHHHHHHHHHHHHHCC--CCc-ceeee
Confidence 53211 12354 4667888888999 9999999976442111 0 0111111 122 45666
Q ss_pred EEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCC-CC--c----chHHHHHHHHHHHHHC
Q 008330 276 EAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRG-NN--V----NDNRYLNCFFGVAAEL 348 (570)
Q Consensus 276 s~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~-~~--~----~~~~~~~~~~~~~~~~ 348 (570)
..|+..... + ....+.+.+++ +.+.|+||.|+|+.+...+ +. . ....+++.++..+.++
T Consensus 213 Q~H~~~~~~--------p--~~~~~~~~l~~----~a~lGl~v~iTElDi~~~~~p~~~~~~~~~Qa~~y~~~~~~~~~~ 278 (335)
T 4f8x_A 213 ESHFIVGET--------P--SLADQLATKQA----YIKANLDVAVTELDVRFSTVPYYTAAAQKQQAEDYYVSVASCMNA 278 (335)
T ss_dssp CCEEETTCC--------C--CHHHHHHHHHH----HHHTTCEEEEEEEEEEBSSSCCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred eeeecCCCC--------C--CHHHHHHHHHH----HHHcCCeeEEeeccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 777653211 1 12345555544 3458999999999997652 21 1 1235566666666665
Q ss_pred C---CceEEeccCceeecccC-ccCCCceeeeecCCCCCc
Q 008330 349 D---WDWALWTLVGSYYLREG-VIGLNEYYGLFDWNWCDI 384 (570)
Q Consensus 349 g---igw~~W~~~G~y~~r~~-~~~~~et~Gll~~dw~~~ 384 (570)
. .|-++|.+...|-.+.+ .++ .+.-+|++.++...
T Consensus 279 ~~~v~git~WG~~D~~sW~~~~~p~-~~~plLfd~~~~pK 317 (335)
T 4f8x_A 279 GPRCIGVVVWDFDDAYSWVPSAFAG-QGGACLFNNTLEAK 317 (335)
T ss_dssp CTTEEEEEESCSBGGGCSHHHHSTT-CBCCSSBCTTCCBC
T ss_pred cCCeeEEEEEcCccCCccCCCCCCC-CCCCccCCCCCCCC
Confidence 3 36789988755433321 121 12346778776543
|
| >3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=7.9e-07 Score=96.33 Aligned_cols=108 Identities=12% Similarity=0.050 Sum_probs=82.4
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++. ..-.++..++.++++|+++.++||.
T Consensus 75 ykeDi~lm~elG~~~yRfsIsWsRI~P~g--------------------------~g~~n~~Gl~~Y~~lid~l~~~GI~ 128 (481)
T 3f5l_A 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDG--------------------------EGRVNQEGVAYYNNLINYLLQKGIT 128 (481)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHCTTS--------------------------SSCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHcCCCEEEecCcHHHhCcCC--------------------------CCCcCHHHHHHHHHHHHHHHHcCCE
Confidence 58999999999999999999997665420 0113567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
+|+.+|+.. |.|.... -.||-+ + ...+.|.++.+.+++||++. |--+-.+|||.
T Consensus 129 P~vTL~H~dlP~~L~~~--yGGW~n-r-~~v~~F~~Ya~~~~~~fgd~--Vk~W~T~NEp~ 183 (481)
T 3f5l_A 129 PYVNLYHYDLPLALEKK--YGGWLN-A-KMADLFTEYADFCFKTFGNR--VKHWFTFNQPR 183 (481)
T ss_dssp EEEESCSSCCBHHHHHH--HCGGGS-T-THHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred EEEEeCCCCCCHHHHHH--hCCCCC-H-HHHHHHHHHHHHHHHHhCCC--CCeEEEccCch
Confidence 999998754 4442110 024433 3 24789999999999999986 44567999995
|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
Probab=98.25 E-value=5.5e-06 Score=91.17 Aligned_cols=171 Identities=11% Similarity=0.079 Sum_probs=104.8
Q ss_pred eEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhh
Q 008330 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQK 118 (570)
Q Consensus 39 L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~ 118 (570)
+.++...++ +|+|+.+.|....-+ -+...-.+++++.||++|+|+||+.+.|...++.
T Consensus 4 F~i~~~f~~--dG~p~~i~~G~~Hy~-------r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~------------- 61 (595)
T 4e8d_A 4 FEIRDDFYL--DGKSFKILSGAIHYF-------RVPPEDWYHSLYNLKALGFNTVETYVAWNLHEPC------------- 61 (595)
T ss_dssp EEESSSEEE--TTEECCCEEEEECGG-------GSCGGGHHHHHHHHHHTTCCEEEEECCHHHHCSB-------------
T ss_pred EEeCCEEEE--CCEEEEEEEEEeChh-------hCCHHHHHHHHHHHHHcCCCEEEEeccHHHcCCC-------------
Confidence 445544555 899999999875321 1122346889999999999999999998766541
Q ss_pred ccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCC--CCC-CCCC-----CCCC---H
Q 008330 119 LGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSD--GNG-FFGD-----QYFN---P 187 (570)
Q Consensus 119 lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~d--gng-~~~d-----~~~~---~ 187 (570)
.|. .+-+...-++++|+.|.++||+|||- ..|.| |+.-+ +-+ |... +..+ .
T Consensus 62 -------~G~-------fdF~g~~dL~~fl~~a~~~Gl~Vilr---pGPYi-~aEw~~GG~P~WL~~~p~~lRt~~p~y~ 123 (595)
T 4e8d_A 62 -------EGE-------FHFEGDLDLEKFLQIAQDLGLYAIVR---PSPFI-CAEWEFGGLPAWLLTKNMRIRSSDPAYI 123 (595)
T ss_dssp -------TTB-------CCCSGGGCHHHHHHHHHHTTCEEEEE---CCSCC-CTTBGGGGCCGGGGGSSSCSSSSCHHHH
T ss_pred -------CCe-------ecccchhhHHHHHHHHHHcCCEEEEe---cCCce-ecccCCCcCChhhccCCceeccCCHHHH
Confidence 111 22233334899999999999999996 12222 22111 011 1110 1112 2
Q ss_pred HHHHHHHHHHHHHhC-----CCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCC
Q 008330 188 DLWIKGLTKMATIFN-----GVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNF 253 (570)
Q Consensus 188 ~~~~~~w~~iA~ryk-----~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w 253 (570)
++..+++++|+++.+ +...||++.+=||-.... .. .+|++.+.+..|+.+-+++++.....|
T Consensus 124 ~~~~~~~~~l~~~l~~~~~~~GgpVI~~QvENEyG~~~-~~---~~Y~~~l~~~~~~~Gi~vpl~t~d~~~ 190 (595)
T 4e8d_A 124 EAVGRYYDQLLPRLVPRLLDNGGNILMMQVENEYGSYG-ED---KAYLRAIRQLMEECGVTCPLFTSDGPW 190 (595)
T ss_dssp HHHHHHHHHHGGGTGGGBGGGTSCEEEEESSSSGGGTC-CC---HHHHHHHHHHHHHTTCCSCEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCEEEEEccccccccC-Cc---HHHHHHHHHHHHHcCCcEEEEEccCcc
Confidence 344455555666544 346799999999985432 22 356667777778888777766643334
|
| >2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=4.8e-07 Score=97.72 Aligned_cols=113 Identities=12% Similarity=0.043 Sum_probs=84.5
Q ss_pred hHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 77 PMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
..+++++.|+++|+|++|+.++|..+.++. ++. .-.++..++.++++|+.+.++||
T Consensus 63 ~y~eDi~lm~~~G~~~~R~sisWsRi~P~g----~~~--------------------g~~n~~G~~~y~~lid~l~~~GI 118 (465)
T 2e3z_A 63 RWREDVQLLKSYGVKAYRFSLSWSRIIPKG----GRS--------------------DPVNGAGIKHYRTLIEELVKEGI 118 (465)
T ss_dssp THHHHHHHHHHTTCSEEEEECCHHHHSTTC----STT--------------------SCCCHHHHHHHHHHHHHHHHHTC
T ss_pred HhHHHHHHHHHhCCCceecccchHHhcCCC----CcC--------------------CCcCHHHHHHHHHHHHHHHHcCC
Confidence 368999999999999999999997665520 000 12356789999999999999999
Q ss_pred EEEEec-CCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCC
Q 008330 157 MVILDN-HISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218 (570)
Q Consensus 157 ~VILD~-H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~ 218 (570)
.+||.+ |.+.|.|..... .||.+.+ ...+.|.++-+.+++||++. |..+-.+|||..
T Consensus 119 ~p~vtL~H~d~P~~L~~~y--ggw~~~~-~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~~ 176 (465)
T 2e3z_A 119 TPFVTLYHWDLPQALDDRY--GGWLNKE-EAIQDFTNYAKLCFESFGDL--VQNWITFNEPWV 176 (465)
T ss_dssp EEEEEEESSCCBHHHHHHH--CGGGSHH-HHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHH
T ss_pred EEEEEeCCCcCCHHHHhhc--CCCCCCc-chHHHHHHHHHHHHHHhCCC--ceEEEEccCchH
Confidence 999998 555565532100 1443302 23678899999999999988 778999999963
|
| >2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=7.8e-06 Score=90.16 Aligned_cols=225 Identities=12% Similarity=0.145 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHhcCCCEEE---EecCCCCCCccccCC-CCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-C--cEEEEecc
Q 008330 141 IKAFQAVVASLGNNNVMVI---LDNHISKPGWCCSNS-DGNGFFGDQYFNPDLWIKGLTKMATIFNGV-R--NVVGMSLR 213 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VI---LD~H~~~~~w~~~~~-dgng~~~d~~~~~~~~~~~w~~iA~ryk~~-p--~Vig~dL~ 213 (570)
|...|++|++|.++||.|. |=.|.-.|.|..... +.++-+-+...-.+++.++.+.|++||++. + .|+.+|+.
T Consensus 245 f~~aD~~v~~A~~ngi~vrGHtLvWhsq~P~W~~~~~~~~~g~~~~~~~l~~~l~~~I~~vv~ry~g~y~~~~i~~WDVv 324 (540)
T 2w5f_A 245 LNRAASILNFCAQNNIAVRGHTLVWHSQTPQWFFKDNFQDNGNWVSQSVMDQRLESYIKNMFAEIQRQYPSLNLYAYDVV 324 (540)
T ss_dssp CTTTHHHHHHHHHTTCEEEEEEEECSSSCCGGGGBTTSSTTSCBCCHHHHHHHHHHHHHHHHHHHHHHCTTSCEEEEEEE
T ss_pred hhHHHHHHHHHHHCCCEEEEEEEEcCCCCchHHhccCcccccCcCCHHHHHHHHHHHHHHHHHHhcccCCCCcEEEEEEe
Confidence 3457999999999999994 557887788865321 111111111001345567788899999974 4 39999999
Q ss_pred CCCCCCC-------C---------ChhHHH------HHHHHHHHHHHhcCCC-cEEEEeCCCCCCcchhhhhccc---C-
Q 008330 214 NELRGPK-------Q---------NVKDWY------RYMQLGAEAVHAANPE-VLVILSGLNFDKDLSFVRNQAV---N- 266 (570)
Q Consensus 214 NEP~~~~-------~---------~~~~W~------~~~~~~~~aIr~~dp~-~lIiVeG~~w~~dl~~~~~~p~---~- 266 (570)
|||.... . ....|+ .|+.++.+..|+++|+ ..+++...+ .....-..... +
T Consensus 325 NE~~~~~~~~~~~~g~~r~~~~~~~~s~w~~~~G~~~~i~~aF~~Ar~~dP~~a~L~~NDyn--~~~~~k~~~~~~lv~~ 402 (540)
T 2w5f_A 325 NAAVSDDANRTRYYGGAREPGYGNGRSPWVQIYGDNKFIEKAFTYARKYAPANCKLYYNDYN--EYWDHKRDCIASICAN 402 (540)
T ss_dssp ESCSCSCHHHHHHSTTCCCBSSBTTBBHHHHHHSSTTHHHHHHHHHHHHSCTTCEEEEEESS--TTSHHHHHHHHHHHHH
T ss_pred cCcccCCccccccccccccccccccCCHHHHhhCcHHHHHHHHHHHHHhCCccceEEEEecc--cccccHHHHHHHHHHH
Confidence 9997532 1 034576 5788899999999997 777775432 21110000000 0
Q ss_pred cC---CCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC---cchHHHHHH
Q 008330 267 LT---FTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN---VNDNRYLNC 340 (570)
Q Consensus 267 l~---~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~---~~~~~~~~~ 340 (570)
+. .-+-+=+..|+..... .+ .....+.+.+++ +.+.|+||.|+|+.+...... .....+++.
T Consensus 403 l~~~gvIdgiG~Q~H~~~~~~--~~------~~~~~~~~~l~~----~a~~Gl~i~iTElDi~~~~~~~~~~~QA~~y~~ 470 (540)
T 2w5f_A 403 LYNKGLLDGVGMQSHINADMN--GF------SGIQNYKAALQK----YINIGCDVQITELDISTENGKFSLQQQADKYKA 470 (540)
T ss_dssp HHHTTCCCEEEECCEEESCSS--ST------TCHHHHHHHHHH----HHTTTSEEEEEEEEEECTTTTSCHHHHHHHHHH
T ss_pred HHhCCcccEEEEeeEecCCCC--CC------CCHHHHHHHHHH----HHhcCCcEEEEeeeecCCCCCchHHHHHHHHHH
Confidence 00 0022333357643211 00 112345555543 345899999999999764321 223456667
Q ss_pred HHHHHHH------CC--CceEEeccCceeecccCccCCCceeeeecCCCCC
Q 008330 341 FFGVAAE------LD--WDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCD 383 (570)
Q Consensus 341 ~~~~~~~------~g--igw~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~ 383 (570)
++..+.+ ++ .+-++|.+...+-.+.+ .+.-+|++.|+..
T Consensus 471 ~~~~~~~~~~~~~~~~v~git~WG~~D~~sW~~~----~~~plLfd~~~~p 517 (540)
T 2w5f_A 471 VFQAAVDINRTSSKGKVTAVCVWGPNDANTWLGS----QNAPLLFNANNQP 517 (540)
T ss_dssp HHHHHHHHHHHCCSSCEEEEEESSSSTTSCTTCG----GGCCSSBCTTSCB
T ss_pred HHHHHHhhhccccCCceeEEEEEcCCCCCcccCC----CCceeeECCCCCC
Confidence 7766543 22 35779997644333311 1122577877654
|
| >3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=6.5e-07 Score=97.24 Aligned_cols=108 Identities=13% Similarity=0.075 Sum_probs=82.3
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++. . ...++..++.++++|+++.++||.
T Consensus 72 Y~eDi~lm~elG~~~yRfsI~WsRI~P~g---------------------~-----g~~N~~Gl~~Y~~lid~l~~~GI~ 125 (488)
T 3gnp_A 72 FEEDIQLMADMGMDAYRFSIAWSRIYPNG---------------------V-----GQVNQAGIDHYNKLIDALLAKGIQ 125 (488)
T ss_dssp HHHHHHHHHHHTCCEEEEECCHHHHCTTS---------------------S-----SSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHcCCCEEEecccHHHeeeCC---------------------C-----CCcCHHHHHHHHHHHHHHHHCCCe
Confidence 68999999999999999999997665420 0 224567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
+|+.+|+.. |.|.... -.||.+. ...+.|.++.+.+++||++. |--+-.+|||.
T Consensus 126 P~vTL~H~dlP~~L~~~--yGGW~n~--~~v~~F~~Ya~~~~~~fgd~--Vk~W~T~NEp~ 180 (488)
T 3gnp_A 126 PYVTLYHWDLPQALEDK--YKGWLDR--QIVDDFAAYAETCFREFGDR--VKHWITLNEPH 180 (488)
T ss_dssp EEEEEESSCCBHHHHHH--HCGGGST--HHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred EEEEeCCCCCCHHHHHH--hCCCCCH--HHHHHHHHHHHHHHHHhCCC--CCEEEEccCcc
Confidence 999997753 4442210 0244432 23689999999999999986 44567999995
|
| >4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A | Back alignment and structure |
|---|
Probab=98.23 E-value=2.2e-06 Score=92.79 Aligned_cols=137 Identities=12% Similarity=0.052 Sum_probs=96.3
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++. | +.-.++..++.++++|+.+.++||.
T Consensus 57 y~eDi~lm~~lG~~~~Rfsi~W~Ri~P~~--------------------G-----~g~~n~~G~~~Y~~lid~l~~~gI~ 111 (479)
T 4b3l_A 57 IESDLTLLASLGHNSYRTSIQWTRLIDDF--------------------E-----QATINPDGLAYYNRVIDACLANGIR 111 (479)
T ss_dssp HHHHHHHHHTTTCCEEEEECCHHHHBSCT--------------------T-----TTCBCHHHHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHcCCCEEEeecCHHHhccCC--------------------C-----CCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 68999999999999999999997665420 0 1223667899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCC------------C-CC
Q 008330 158 VILDNHISK-PGWCCSNSDG-NGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP------------K-QN 222 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dg-ng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~------------~-~~ 222 (570)
+|+.+|+.. |.|... . .||-+ + ...+.|.++-+.+++||++. |--+-.+|||... . .+
T Consensus 112 p~vtL~H~dlP~~L~~---~yGGW~n-r-~~vd~F~~YA~~~f~~fgdr--Vk~WiT~NEp~~~~~~gy~~G~~~Pg~~~ 184 (479)
T 4b3l_A 112 PVINLHHFDLPIALYQ---AYGGWES-K-HVVDLFVAFSKVCFEQFGDR--VKDWFVHNEPMVVVEGSYLMQFHYPAIVD 184 (479)
T ss_dssp EEEESCSSCCBHHHHH---HHCGGGC-H-HHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSSSSTTCCCC
T ss_pred eeEEecCCCcCHHHHH---hcCCcCC-H-HHHHHHHHHHHHHHHHhCcc--CCeEEEccCcchhhhccccccccCCCCCC
Confidence 999998753 434211 1 24333 2 23688999999999999987 4446689999631 1 11
Q ss_pred hhHHH-------HHHHHHHHHHHhcC---CCcEE
Q 008330 223 VKDWY-------RYMQLGAEAVHAAN---PEVLV 246 (570)
Q Consensus 223 ~~~W~-------~~~~~~~~aIr~~d---p~~lI 246 (570)
...-+ ....++++++|+.. |+.-|
T Consensus 185 ~~~~~~~~h~~llAha~Av~~~r~~~~~~~~~~I 218 (479)
T 4b3l_A 185 GKKAVQVAYNLALATAKVIQAYRRGPAELSDGRI 218 (479)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCGGGSSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCEE
Confidence 12211 22346788899988 76544
|
| >1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1.6e-06 Score=92.76 Aligned_cols=103 Identities=14% Similarity=0.302 Sum_probs=79.6
Q ss_pred ccceeeCCCCceeeeecCC--CCceecCCCCCC--CCccccC------CcceeecccceEEeeccC--CccceeccccC-
Q 008330 410 LHKVIYHPATGLCVQRKSF--LDPLTLGPCTES--EAWSYTP------HKTISLKGAYFCLQAKHV--GKPAKLGIICT- 476 (570)
Q Consensus 410 ~~~~~~~~~tg~c~~~~~~--~~~~~~~~c~~~--~~W~~~~------~~~~~~~~~~~cl~a~~~--g~~~~~~~~c~- 476 (570)
.++.+..+.+|+|+++.+. ..++.+++|++. |+|.++. .+.|+-..+++||++.+. |.++.+ ++|.
T Consensus 107 g~y~I~N~~SG~CLDv~g~~~Ga~V~l~~C~g~~nQ~W~lt~~g~g~~~G~Irn~~sg~CLDv~g~s~Ga~V~l-~~C~g 185 (432)
T 1vcl_A 107 VATEIINLASGKCLDIEGSDGTGDIGVYDCQNLDDQYFYVRSRGPELFYGRLRNEKSDLCLDVEGSDGKGNVLM-YSCED 185 (432)
T ss_dssp EEEEEEETTTCCEEEESSSSSCSBEEEECCCCCGGGCEEECCCCCEEEEEEEEETTTCCEEEESSSSSCEEEEE-ECCCS
T ss_pred cceEEEECCCCceeeecCCCCCCeEEEEeCCCCCccceeeecCCCCccceEEEECCCCcEEEecCCCCCCeEEE-EecCC
Confidence 3567888999999999553 356999999875 7999998 556776678999999886 666666 8999
Q ss_pred CCCCceeEeeccccEEEEecCCCceEEEeecCC---Cceeeccee
Q 008330 477 DCGSTWEIISDSKMHLSSKADNGTTVCLDVDSS---NTIVTNTCK 518 (570)
Q Consensus 477 ~~~~~W~~~s~~~~~~~~~~~~~~~~cld~~~~---~~~~~~~c~ 518 (570)
+.+|+|++..++.+ .. ..+++|||+.+. ..|+.+.|.
T Consensus 186 ~~nQ~W~~~~~G~I--~n---~~Sg~CLDv~g~st~a~V~l~~C~ 225 (432)
T 1vcl_A 186 NLDQWFRYYENGEI--VN---AKSGMCLDVEGSDGSGNVGIYRCD 225 (432)
T ss_dssp CGGGCEEEETTSCE--EE---TTTCCEEEESSSSSCSBEEEECCC
T ss_pred CCCeeEEEeCCCCE--Ee---CCCCeEEEeCCCCCCCeEEEEecC
Confidence 67899999887753 22 247899999753 467777774
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=2.4e-06 Score=94.02 Aligned_cols=121 Identities=12% Similarity=0.059 Sum_probs=84.9
Q ss_pred ccceeeCCCCceeeeecCC----CCceecCCCCCC--CCccccCCc----ceeecccceEEeeccC----Cccceecccc
Q 008330 410 LHKVIYHPATGLCVQRKSF----LDPLTLGPCTES--EAWSYTPHK----TISLKGAYFCLQAKHV----GKPAKLGIIC 475 (570)
Q Consensus 410 ~~~~~~~~~tg~c~~~~~~----~~~~~~~~c~~~--~~W~~~~~~----~~~~~~~~~cl~a~~~----g~~~~~~~~c 475 (570)
..+.+....||+|+++.+. ..++.+++|+++ |+|.++..+ .|+.+.+++||++.+. |.++.+ +.|
T Consensus 361 ~~y~i~n~~sg~cLdv~~~~~~~G~~v~~~~c~g~~~Q~W~~~~~g~g~y~i~n~~sg~cLdv~~~~~~~G~~v~~-~~c 439 (526)
T 3vsf_A 361 TRYKLVNKNSGKVLDVLDGSVDNAAQIVQWTDNGSLSQQWYLVDVGGGYKKIVNVKSGRALDVKDESKEDGGVLIQ-YTS 439 (526)
T ss_dssp CCEEEEETTTCCEEEEGGGCCSTTEEEEEECCCCCGGGCEEEEECSTTEEEEEESSSCCEEEEGGGCCSTTEEEEE-ECC
T ss_pred ccEEEEECCCCceEEecCCCCCCCcEEEEccCCCCcceEEEEEECCCCEEEEEECCCCCEEEeCCCCCCCCCEEEE-ecC
Confidence 3578889999999998442 356999999985 799998554 4555678999998764 555555 899
Q ss_pred C-CCCCceeEeeccccEEEEecCCCceEEEeecC----CC-ceeecceeeeCCCCCCCccCceEEEEeccC
Q 008330 476 T-DCGSTWEIISDSKMHLSSKADNGTTVCLDVDS----SN-TIVTNTCKCLSRDKTCDPASQWFKLVDSTR 540 (570)
Q Consensus 476 ~-~~~~~W~~~s~~~~~~~~~~~~~~~~cld~~~----~~-~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~ 540 (570)
. +.+|+|++..++......+ ...+++|||+.+ +| .|+.+.|. . .+ .|=|+++..+.
T Consensus 440 ~g~~nQ~W~~~~~g~g~y~i~-~~~sg~cLdv~~~s~~~G~~v~~~~c~--g-----~~-nQ~W~~~~v~~ 501 (526)
T 3vsf_A 440 NGGYNQHWKFTDIGDGYYKIS-SRHCGKLIDVRKWSTEDGGIIQQWSDA--G-----GT-NQHWKLVLVSS 501 (526)
T ss_dssp CCCGGGCEEEEEEETTEEEEE-ESSSCCEEEEGGGCCSTTEEEEEECCC--C-----CG-GGCEEEEEC--
T ss_pred CCCcccEEEEEECCCCeEEEE-ECCCCCEEEeCCCCCCCCCEEEEEcCC--C-----Cc-cCeEEEEecCC
Confidence 9 7889999987764333222 224689999962 55 66668774 1 23 45557877765
|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=4.2e-06 Score=96.39 Aligned_cols=176 Identities=14% Similarity=0.084 Sum_probs=112.4
Q ss_pred CCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhh
Q 008330 37 LPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSF 116 (570)
Q Consensus 37 ~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~ 116 (570)
..++.+++.|+ -+|+|+.+.|....-+. +| ...-.+++++.||++|+|+|++.+.|.+.++.
T Consensus 24 ~~v~~d~~~~~-idG~p~~i~sGeiHy~R---~p---~pe~W~d~l~kmKa~GlNtV~tYV~Wn~hEP~----------- 85 (1003)
T 3og2_A 24 NIVTWDEHSLF-VHGERVVIFSGEVHPFR---LP---VPSLYLDVFHKIKALGFNTVSFYVDWALLEGK----------- 85 (1003)
T ss_dssp SSEEECSSCEE-ETTEEECEEEEEECGGG---CC---CGGGHHHHHHHHHTTTCCEEEEECCHHHHCSB-----------
T ss_pred ceEEEcCCeEE-ECCEEEEEEEEEECCcc---CC---CHHHHHHHHHHHHHcCCCEEEEecchhhcCCC-----------
Confidence 44777777654 48999999887643221 11 11236899999999999999999998776542
Q ss_pred hhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCC--CC-CCCC-----CCCC--
Q 008330 117 QKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDG--NG-FFGD-----QYFN-- 186 (570)
Q Consensus 117 ~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dg--ng-~~~d-----~~~~-- 186 (570)
+|.+ +-+...-|+++|+.|.++||+|||-. +.|.|+.-+. -+ |... +..+
T Consensus 86 ---------eG~f-------dFsg~~dL~~fl~la~e~GL~VILRp----GPYi~aEw~~GG~P~WL~~~~~~lRt~~p~ 145 (1003)
T 3og2_A 86 ---------PGRF-------RADGIFSLEPFFEAATKAGIYLLARP----GPYINAEVSGGGFPGWLQRVKGKLRTDAPD 145 (1003)
T ss_dssp ---------TTBC-------CCCGGGCSHHHHHHHHHHTCEEEEEE----ESCCCTTBGGGGCCGGGGGCCSCTTSCCHH
T ss_pred ---------CCEe-------cccchhhHHHHHHHHHHcCCEEEecC----CcceeeecCCCCccchhccCCCeecCCCHH
Confidence 1222 22222348999999999999999952 1222222111 01 1100 0112
Q ss_pred -HHHHHHHHHHHHHHhCCC-----CcEEEEeccCCCCCCCCCh-hHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 187 -PDLWIKGLTKMATIFNGV-----RNVVGMSLRNELRGPKQNV-KDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 187 -~~~~~~~w~~iA~ryk~~-----p~Vig~dL~NEP~~~~~~~-~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
.++..++.++|+++++.+ ..||++.+=||-....... ..=.+||+.+.+..|+.+-.++++...
T Consensus 146 yl~~~~~~~~~l~~~~~~~~~~~GGpII~~QVENEYG~~~~~~~~~d~~Ym~~L~~~~~~~Gi~VPl~t~d 216 (1003)
T 3og2_A 146 YLHATDNYVAHIASIIAKAQITNGGPVILYQPENEYSGAAEGVLFPNKPYMQYVIDQARNAGIIVPLINND 216 (1003)
T ss_dssp HHHHHHHHHHHHHHHHHHTBGGGTSSEEEEEESSCCCCBCTTSCSSCHHHHHHHHHHHHHTTCCSCBBCCB
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCEEEEEcccccCcccccccCCCHHHHHHHHHHHHHcCCceEEEEcC
Confidence 356667888899998855 5799999999986532100 002478888888889988777766543
|
| >1m2t_B Mistletoe lectin I B chain; ribosome inactivation, ribosome inhibitor, hydrolase; HET: NAG FUC ADE; 1.89A {Viscum album} SCOP: b.42.2.1 b.42.2.1 PDB: 2r9k_B* 3d7w_B* 3cef_B* 1sz6_B* 1pum_B* 1puu_B* 2rg9_B* 3o5w_B* 1onk_B* 1oql_B* 1tfm_B* 1pc8_B* 1yf8_B* 1ce7_B* 2mll_B* | Back alignment and structure |
|---|
Probab=98.19 E-value=1.9e-06 Score=86.13 Aligned_cols=99 Identities=18% Similarity=0.308 Sum_probs=72.5
Q ss_pred cceeeCCCCceeeeecCC----CCceecCCC--CC--CCCccccCCcceeecccceEEeecc--CCccceeccccCC---
Q 008330 411 HKVIYHPATGLCVQRKSF----LDPLTLGPC--TE--SEAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICTD--- 477 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~----~~~~~~~~c--~~--~~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~~--- 477 (570)
.+.+... +|+|+++.+. ..++.+++| +. +++|++++++.|++. ++||++.+ .|.++.+ ++|.+
T Consensus 11 ~~~i~~~-sg~ClDv~~~~~~~g~~v~~~~c~~~~~~~Q~w~~~~~g~ir~~--g~CLdv~~~~~g~~v~~-~~c~~~~~ 86 (263)
T 1m2t_B 11 IVRIVGR-NGMTVDVRDDDFHDGNQIQLWPSKSNNDPNQLWTIKKDGTIRSN--GSCLTTYGYTAGVYVMI-FDCNTAVR 86 (263)
T ss_dssp EECEECG-GGCEEEEGGGCCSTTCBEEEECCCCSCCGGGCEEECTTSCEEET--TEEEEESCSSTTCBEEE-EETTTSCG
T ss_pred eEEEEcC-CCCEEECCCCCCCCCCEEEEeeCCCCCChhceeEECCCCeEEEc--cEEEcccccCCCCEEEE-EeCCCCCC
Confidence 3445555 9999999532 367999999 54 379999999988874 69999965 4676666 89985
Q ss_pred CCCceeEeeccccEEEEecCCCceEEEeecC--CC-ceeeccee
Q 008330 478 CGSTWEIISDSKMHLSSKADNGTTVCLDVDS--SN-TIVTNTCK 518 (570)
Q Consensus 478 ~~~~W~~~s~~~~~~~~~~~~~~~~cld~~~--~~-~~~~~~c~ 518 (570)
.+|+|++..++. |.. ..+++|||+.. +| .++.+.|.
T Consensus 87 ~~Q~W~~~~~g~--i~n---~~sg~cLd~~~~~~g~~v~~~~c~ 125 (263)
T 1m2t_B 87 EATIWQIWGNGT--IIN---PRSNLVLAASSGIKGTTLTVQTLD 125 (263)
T ss_dssp GGGCCEECTTSC--EEE---TTTTEEEECSSCSTTCBCEEECCC
T ss_pred cccEEEECCCCC--EEe---CCCCceEccCCCCccceEEEeccC
Confidence 579999987665 322 35789999973 44 56667773
|
| >2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A | Back alignment and structure |
|---|
Probab=98.18 E-value=8.4e-07 Score=97.12 Aligned_cols=110 Identities=14% Similarity=0.055 Sum_probs=83.0
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++. +.. .-.++..++.++++|+.+.++||.
T Consensus 99 y~eDi~lm~~lG~~~~R~sisWsRi~P~g----~~~--------------------g~~n~~G~~~Y~~lid~l~~~GI~ 154 (532)
T 2jf7_A 99 YKEDIKIMKQTGLESYRFSISWSRVLPGG----RLA--------------------AGVNKDGVKFYHDFIDELLANGIK 154 (532)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSTTS----SST--------------------TCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHcCCCeEeccccHHHhccCC----CCC--------------------CCcCHHHHHHHHHHHHHHHHCCCE
Confidence 58999999999999999999997665420 000 123567899999999999999999
Q ss_pred EEEec-CCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDN-HISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~-H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
+||.+ |.+.|.|..... .+|.+.. ..+.|.++-+.+++||++. |..+-.+|||.
T Consensus 155 p~vtL~H~d~P~~L~~~y--ggw~~r~--~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 209 (532)
T 2jf7_A 155 PSVTLFHWDLPQALEDEY--GGFLSHR--IVDDFCEYAEFCFWEFGDK--IKYWTTFNEPH 209 (532)
T ss_dssp EEEEEESSCCBHHHHHHH--CGGGSTH--HHHHHHHHHHHHHHHHGGG--CSEEEEEECHH
T ss_pred EEEEeCCCCCCHHHHhhc--CCCCCch--HHHHHHHHHHHHHHHhCCc--CceEEEccCch
Confidence 99997 545555532100 1433322 4688999999999999987 77899999996
|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
Probab=98.14 E-value=1.8e-06 Score=93.09 Aligned_cols=99 Identities=20% Similarity=0.414 Sum_probs=75.9
Q ss_pred ceeeCCCCceeeeecCC--CCceecCCCCCC---CCccccCCcceeecccceEEeeccCCccceeccccC--CCCCceeE
Q 008330 412 KVIYHPATGLCVQRKSF--LDPLTLGPCTES---EAWSYTPHKTISLKGAYFCLQAKHVGKPAKLGIICT--DCGSTWEI 484 (570)
Q Consensus 412 ~~~~~~~tg~c~~~~~~--~~~~~~~~c~~~---~~W~~~~~~~~~~~~~~~cl~a~~~g~~~~~~~~c~--~~~~~W~~ 484 (570)
..+.+..+|+|+++.+. ..++.+++|.+. |.|+++..+.|+. .++||++...|.++.+ +.|. +.+|+|+.
T Consensus 345 g~i~~~~~~~Cld~~~~~~g~~v~l~~C~~~~~nQ~w~~~~~g~i~~--~~~Cld~~~~g~~v~l-~~C~~~~~~Q~W~~ 421 (472)
T 1xhb_A 345 GEIRNVETNQCLDNMARKENEKVGIFNCHGMGGNQVFSYTANKEIRT--DDLCLDVSKLNGPVTM-LKCHHLKGNQLWEY 421 (472)
T ss_dssp ECEEETTTCEEEECTTCCTTEECEEEECCSCCGGGCEEEETTSCEEE--TTEEEECCSTTCCCEE-EECCTTCGGGCEEE
T ss_pred ceEEECCCCccccccCCCCCCeEEEEeCCCCCcceeEEEcccceeee--cceEEeecCCCceEEE-EeCCCCCcCceEEE
Confidence 45677889999998542 356999999873 7999999998874 5699999988888888 8998 46899999
Q ss_pred ee-ccccEEEEecCCCceEEEeecC--CC-ceeeccee
Q 008330 485 IS-DSKMHLSSKADNGTTVCLDVDS--SN-TIVTNTCK 518 (570)
Q Consensus 485 ~s-~~~~~~~~~~~~~~~~cld~~~--~~-~~~~~~c~ 518 (570)
.. ++. |.. ..+++|||+.+ +| .++.+.|.
T Consensus 422 ~~~~g~--i~~---~~sg~CLd~~~~~~~~~~~~~~C~ 454 (472)
T 1xhb_A 422 DPVKLT--LQH---VNSNQCLDKATEEDSQVPSIRDCT 454 (472)
T ss_dssp ETTTTE--EEE---SSSCEEEESCCSSSTTSCEEEECC
T ss_pred eCCCCe--EEe---CCCCeeEccccCCCCCeEEEEeCC
Confidence 76 443 322 25789999973 44 66668773
|
| >3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=2.5e-06 Score=95.62 Aligned_cols=100 Identities=23% Similarity=0.480 Sum_probs=76.7
Q ss_pred ceeeCCCCceeeeecCC----CCceecCCCCCC--CCccccCCcceeecccceEEeecc----CCccceeccccC-CCCC
Q 008330 412 KVIYHPATGLCVQRKSF----LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKH----VGKPAKLGIICT-DCGS 480 (570)
Q Consensus 412 ~~~~~~~tg~c~~~~~~----~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~----~g~~~~~~~~c~-~~~~ 480 (570)
..+....||+|+++.+. ..++.+++|.++ |+|.++..+.|++. +++||++.+ +|.++.+ +.|. +.+|
T Consensus 489 g~i~n~~sg~CLDv~~~~~~~g~~v~l~~C~g~~nQ~w~~~~~g~ir~~-~~~CLdv~~~~~~~G~~V~l-~~C~g~~nQ 566 (614)
T 3a21_A 489 ALVTGKQSGRCADIYNNTITNGTQAELWDCNGGPNQSWTYTSRKELVLY-GNKCLDAYNLGTTNGTKVVI-WDCNGQANQ 566 (614)
T ss_dssp BCCEETTTCCEEECGGGCCCTTCBCEEECCCCCGGGCBEECTTSCEEET-TTEEEEEGGGCCSTTCBEEE-EECCCCGGG
T ss_pred EEEEECCCCcEEEeCCCCCCCCCEEEEECCCCCCCceEEEECCceEEEC-CCcEEECCCCcCCCCceEEE-eCCCCCCcc
Confidence 45667889999998442 356999999985 79999998988864 489999986 4777776 8999 6789
Q ss_pred ceeEeeccccEEEEecCCCceEEEeecC----CC-ceeeccee
Q 008330 481 TWEIISDSKMHLSSKADNGTTVCLDVDS----SN-TIVTNTCK 518 (570)
Q Consensus 481 ~W~~~s~~~~~~~~~~~~~~~~cld~~~----~~-~~~~~~c~ 518 (570)
+|++..++. |.. ..+++|||+.+ +| .++.+.|.
T Consensus 567 ~W~~~~~g~--i~~---~~sg~CLdv~~~st~~g~~v~~~~C~ 604 (614)
T 3a21_A 567 KWNINSDGT--ITN---VNAGLCLDAYNAATANGTSLVLWSCG 604 (614)
T ss_dssp CEEECTTSC--EEE---TTTCCEEEEGGGCCSTTCBEEEECCC
T ss_pred EEEEcCCCe--EEE---CCCCceEecCCCCCCCCCEEEEEcCC
Confidence 999987764 322 25789999962 45 67778773
|
| >3c9z_A Agglutinin II, SNA-II; beta-trefoil, ricin-B domain, glycosylation, glycoprotein, L sugar binding protein, plant protein; HET: NAG FUC SO4; 1.35A {Sambucus nigra} PDB: 3ca0_A* 3ca1_A* 3ca3_A* 3ca4_A* 3ca5_A* 3ca6_A* 3cah_A* 1hwm_B* 1hwn_B* 1hwo_B* 1hwp_B* | Back alignment and structure |
|---|
Probab=98.12 E-value=4.2e-06 Score=83.33 Aligned_cols=97 Identities=14% Similarity=0.254 Sum_probs=73.9
Q ss_pred CceeeeecC--CCCceecCCCCCC----CCccccCCcceeecccceEEeecc--CCccceeccccC-CCCCceeEeeccc
Q 008330 419 TGLCVQRKS--FLDPLTLGPCTES----EAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICT-DCGSTWEIISDSK 489 (570)
Q Consensus 419 tg~c~~~~~--~~~~~~~~~c~~~----~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~-~~~~~W~~~s~~~ 489 (570)
+|+|+++.+ ...++.+++|..+ ++|.++.++.|+-+.+++||++.+ .|.++.+ +.|. ..+|+|++...+.
T Consensus 52 ~g~CLd~~g~~~g~~v~~~~c~~~~~~~Q~W~~~~~g~i~n~~sg~cLd~~~~~~g~~v~~-~~c~~~~~Q~W~~~~~~~ 130 (258)
T 3c9z_A 52 MGKCMTANGLNNGSNIVIFNCSTAAENAIKWEVPIDGSIINPSSGLVMTAPRAASRTILLL-EDNIYAASQGWTVTNNVK 130 (258)
T ss_dssp TTEEEEEESSSTTCEEEEECTTTSCGGGSCCBCCTTSCCBCTTTCCEEECSSSSTTCBCEE-ECCCCCGGGCCEEESCCS
T ss_pred CCeEEcccCCCCCCEEEEEeCCCCCCcCCEEEEcCCCeEEECCCCcEEecCCCCCCcceEE-EccCCCCccEEEEcCCCC
Confidence 799999964 2356999999974 799999888777778999999887 4666666 7899 7789999988777
Q ss_pred cEEEEecCCCceEEEeecCCC-ceeecce
Q 008330 490 MHLSSKADNGTTVCLDVDSSN-TIVTNTC 517 (570)
Q Consensus 490 ~~~~~~~~~~~~~cld~~~~~-~~~~~~c 517 (570)
.++..... .+.+|||+.+.| .|+...|
T Consensus 131 ~~~~~i~~-~~~~CLdv~~~g~~v~l~~C 158 (258)
T 3c9z_A 131 PIVASIVG-YKEMCLQSNGENNGVWMEDC 158 (258)
T ss_dssp CEEEEEEC-GGGCEEECCCTTSBCEEECC
T ss_pred ceEEeecC-cCCcceEcCCCCceEEEEec
Confidence 76544432 378999997544 4544555
|
| >3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} | Back alignment and structure |
|---|
Probab=98.08 E-value=2.3e-06 Score=92.57 Aligned_cols=110 Identities=12% Similarity=-0.002 Sum_probs=82.4
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|++|+.++|..+.++. ++. .-.++..++.++++|+.+.++||.
T Consensus 64 y~eDi~lm~~lG~~~~R~sisWsRi~P~g----~~~--------------------g~~n~~G~~~y~~lid~l~~~GI~ 119 (473)
T 3ahy_A 64 TAEDIALLKSLGAKSYRFSISWSRIIPEG----GRG--------------------DAVNQAGIDHYVKFVDDLLDAGIT 119 (473)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSSSC----STT--------------------SCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHhCCCeEEccccHHhhcCCC----CCC--------------------CCcCHHHHHHHHHHHHHHHHcCCE
Confidence 68999999999999999999997765520 000 123567899999999999999999
Q ss_pred EEEecCC-CCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHI-SKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~-~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
+||.+++ +.|.|..... .||-+.+ ...+.|.++-+.++++| +. |..+-.+|||.
T Consensus 120 p~vtL~H~d~P~~L~~~y--ggw~~~~-~~~~~f~~ya~~~~~~~-dr--V~~W~t~NEp~ 174 (473)
T 3ahy_A 120 PFITLFHWDLPEGLHQRY--GGLLNRT-EFPLDFENYARVMFRAL-PK--VRNWITFNEPL 174 (473)
T ss_dssp EEEEEESSCCBHHHHHHH--CGGGCTT-HHHHHHHHHHHHHHHHC-TT--CCEEEEEECHH
T ss_pred EEEEeCCCcCCHHHHhhc--CCCcCch-hhHHHHHHHHHHHHHHh-Cc--CCEEEecCchh
Confidence 9999854 4555532100 1333312 24688999999999999 65 77899999995
|
| >2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B* | Back alignment and structure |
|---|
Probab=98.06 E-value=5.1e-06 Score=82.99 Aligned_cols=92 Identities=22% Similarity=0.440 Sum_probs=70.9
Q ss_pred CceeeeecCCCCceecCCCCC---CCCccccCCcceeec-ccceEEeecc--CCccceecccc-C-CCCCceeEeecccc
Q 008330 419 TGLCVQRKSFLDPLTLGPCTE---SEAWSYTPHKTISLK-GAYFCLQAKH--VGKPAKLGIIC-T-DCGSTWEIISDSKM 490 (570)
Q Consensus 419 tg~c~~~~~~~~~~~~~~c~~---~~~W~~~~~~~~~~~-~~~~cl~a~~--~g~~~~~~~~c-~-~~~~~W~~~s~~~~ 490 (570)
+++|+++.+ .++.+.+|.. ++.|.|+.++.|+.. .+++||++.+ .|.++.+ ..| . +++|+|++..++.+
T Consensus 148 ~~~CLd~~g--~~v~l~~C~~~~~~Q~w~~~~~g~ir~~~~~~~CLd~~~~~~g~~v~l-~~C~~~~~~Q~W~~~~~g~i 224 (262)
T 2aai_B 148 YGLCLQANS--GQVWIEDCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKI-LSCGPASSGQRWMFKNDGTI 224 (262)
T ss_dssp GGCEEEEET--TEEEEECCCTTSSCCCEEECTTSCEEETTSTTEEEEECCSSCSSCEEE-EESTTCCTTSCCEECTTSCE
T ss_pred CCeeeecCC--ceEEEEecCCCCCcCEEEEeCCccEEECCCCCceEccCCCCCCCeEEE-EcCCCCCCcCeEEECCCCcE
Confidence 699999965 3599999985 589999999988874 3689999976 3677777 899 4 77899999877653
Q ss_pred EEEEecCCCceEEEeec---CCC-ceeeccee
Q 008330 491 HLSSKADNGTTVCLDVD---SSN-TIVTNTCK 518 (570)
Q Consensus 491 ~~~~~~~~~~~~cld~~---~~~-~~~~~~c~ 518 (570)
. ...+++|||+. .++ .|+.+.|.
T Consensus 225 --~---~~~sg~CLdv~~~~~~g~~v~~~~c~ 251 (262)
T 2aai_B 225 --L---NLYSGLVLDVRASDPSLKQIILYPLH 251 (262)
T ss_dssp --E---CTTTCCEEEEGGGCGGGCCEEEECCC
T ss_pred --E---ECCCCeEEeecCCCCCCCEEEEEcCC
Confidence 2 23588999994 244 67778874
|
| >1m2t_B Mistletoe lectin I B chain; ribosome inactivation, ribosome inhibitor, hydrolase; HET: NAG FUC ADE; 1.89A {Viscum album} SCOP: b.42.2.1 b.42.2.1 PDB: 2r9k_B* 3d7w_B* 3cef_B* 1sz6_B* 1pum_B* 1puu_B* 2rg9_B* 3o5w_B* 1onk_B* 1oql_B* 1tfm_B* 1pc8_B* 1yf8_B* 1ce7_B* 2mll_B* | Back alignment and structure |
|---|
Probab=98.05 E-value=3.4e-06 Score=84.31 Aligned_cols=93 Identities=17% Similarity=0.397 Sum_probs=72.6
Q ss_pred CCCceeeeecCCCCceecCCCCCC---CCccccCCcceeec-ccceEEeecc--CCccceecccc-C-CCCCceeEeecc
Q 008330 417 PATGLCVQRKSFLDPLTLGPCTES---EAWSYTPHKTISLK-GAYFCLQAKH--VGKPAKLGIIC-T-DCGSTWEIISDS 488 (570)
Q Consensus 417 ~~tg~c~~~~~~~~~~~~~~c~~~---~~W~~~~~~~~~~~-~~~~cl~a~~--~g~~~~~~~~c-~-~~~~~W~~~s~~ 488 (570)
..+|+|+++.+ .++.+++|.++ ++|.+++++.|+.. +..+||++.+ .|.++.+ ..| . +++|+|++.+++
T Consensus 147 ~~s~~CLd~~g--~~v~l~~C~g~~~~Q~W~~~~~g~ir~~~~~~lcl~~~~~~~G~~v~~-~~C~~~~~~Q~W~~~~~g 223 (263)
T 1m2t_B 147 GFRDLCMESAG--GSVYVETCTAGQENQRWALYGDGSIRPKQLQSQCLTNGRDSISTVINI-VSCSAGSSGQRWVFTNEG 223 (263)
T ss_dssp CGGGCEEEEET--TEEEEECCCTTCGGGCEEECTTSCEEETTCTTEEEECSSCSTTCBCEE-EESTTCCGGGCEEECTTS
T ss_pred ccCccccccCC--CEEEEEecCCCCcccEEEEcCCCeEEEcCCCceeeccCCcCCCCEEEE-EECCCCCcccEEEEcCCC
Confidence 45899999864 45999999974 79999999988875 5689999866 5777777 889 5 778999998877
Q ss_pred ccEEEEecCCCceEEEeecC---CC-ceeecce
Q 008330 489 KMHLSSKADNGTTVCLDVDS---SN-TIVTNTC 517 (570)
Q Consensus 489 ~~~~~~~~~~~~~~cld~~~---~~-~~~~~~c 517 (570)
.+ .. ..+++|||+.+ +| .|+.+.|
T Consensus 224 ~i--~~---~~sg~cLDv~~~~~~g~~v~~~~c 251 (263)
T 1m2t_B 224 AI--LN---LKNGLAMDVAQANPSLQRIIIYPA 251 (263)
T ss_dssp CE--EE---TTTCCEEEEGGGCGGGCCEEEECC
T ss_pred CE--EE---CCCCeEEecCCCCCCCCEEEEEeC
Confidence 53 22 35789999963 45 6777887
|
| >1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=4.5e-06 Score=89.27 Aligned_cols=103 Identities=15% Similarity=0.276 Sum_probs=77.6
Q ss_pred ceeeCCCCceeeeecCC--CCceecCCCCCC--CCccccCCcceeecccceEEeeccCC--ccceeccccC-CCCCceeE
Q 008330 412 KVIYHPATGLCVQRKSF--LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKHVG--KPAKLGIICT-DCGSTWEI 484 (570)
Q Consensus 412 ~~~~~~~tg~c~~~~~~--~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~~g--~~~~~~~~c~-~~~~~W~~ 484 (570)
..+....+|+|+++.+. ..++.+++|.++ ++|.++.++.|+-+.+++||++.+.+ .++. .+.|. +++|+|++
T Consensus 156 G~Irn~~sg~CLDv~g~s~Ga~V~l~~C~g~~nQ~W~~~~~G~I~n~~Sg~CLDv~g~st~a~V~-l~~C~g~~nQ~W~~ 234 (432)
T 1vcl_A 156 GRLRNEKSDLCLDVEGSDGKGNVLMYSCEDNLDQWFRYYENGEIVNAKSGMCLDVEGSDGSGNVG-IYRCDDLRDQMWSR 234 (432)
T ss_dssp EEEEETTTCCEEEESSSSSCEEEEEECCCSCGGGCEEEETTSCEEETTTCCEEEESSSSSCSBEE-EECCCCCGGGCEEC
T ss_pred eEEEECCCCcEEEecCCCCCCeEEEEecCCCCCeeEEEeCCCCEEeCCCCeEEEeCCCCCCCeEE-EEecCCCCccEEEE
Confidence 35666779999999653 356999999985 79999998888877889999998864 3344 48998 77899999
Q ss_pred eecc--c--cEEEEecCCCceEEEeecCC---Cceeeccee
Q 008330 485 ISDS--K--MHLSSKADNGTTVCLDVDSS---NTIVTNTCK 518 (570)
Q Consensus 485 ~s~~--~--~~~~~~~~~~~~~cld~~~~---~~~~~~~c~ 518 (570)
..++ . .+|. ...+++|||+.+. ..|+.+.|.
T Consensus 235 ~~~~~~Gg~~~I~---n~~SGkCLDv~g~st~~~V~~~~C~ 272 (432)
T 1vcl_A 235 PNAYCNGDYCSFL---NKESNKCLDVSGDQGTGDVGTWQCD 272 (432)
T ss_dssp CGGGCBTTEECCE---ETTTCCEEEESSSSSCSBEEEECCC
T ss_pred ecccCCCCeEEEE---ECCCCCeEecCCCCCCceEEEEccC
Confidence 8763 1 2333 2357899999853 477778874
|
| >1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00047 Score=75.26 Aligned_cols=94 Identities=11% Similarity=0.113 Sum_probs=65.5
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHH--------HHHHHHHHhCC-CC-cEEEEecc
Q 008330 144 FQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIK--------GLTKMATIFNG-VR-NVVGMSLR 213 (570)
Q Consensus 144 ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~--------~w~~iA~ryk~-~p-~Vig~dL~ 213 (570)
+|+++++|.+.|+..++-+-...+ ...+...|++ -|..+-.+|.- +| +|--+||.
T Consensus 109 ~def~~~~~~~g~ep~~~vn~g~~---------------~~~~a~~~vey~n~~~~t~~~~lR~~~G~~ep~~v~yweiG 173 (502)
T 1qw9_A 109 LNEFMDWAKMVGAEVNMAVNLGTR---------------GIDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLG 173 (502)
T ss_dssp HHHHHHHHHHHTCEEEEEECCSSC---------------CHHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEES
T ss_pred HHHHHHHHHHcCCeEEEEEeCCCC---------------CHHHHHHHHHHhCCCCCCcHHHHHHHcCCCCCCCCeEEEEe
Confidence 689999999999999987643210 0011223332 24455556642 34 67789999
Q ss_pred CCCCCCCC----ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCC
Q 008330 214 NELRGPKQ----NVKDWYRYMQLGAEAVHAANPEVLVILSGLN 252 (570)
Q Consensus 214 NEP~~~~~----~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~ 252 (570)
|||.+.++ +.+++.+.+.+.+++||+++|+..|+..|..
T Consensus 174 NE~~g~w~~g~~t~~~Y~~~~~~~a~aik~~dP~i~via~G~~ 216 (502)
T 1qw9_A 174 NAMDGPWQIGHKTAVEYGRIACEAAKVMKWVDPTIELVVCGSS 216 (502)
T ss_dssp SCCCSTTSTTCCCHHHHHHHHHHHHHHHHHHCTTCEEEECCCS
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 99987642 5677888889999999999999888776654
|
| >3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A | Back alignment and structure |
|---|
Probab=98.04 E-value=4.2e-06 Score=90.71 Aligned_cols=109 Identities=11% Similarity=0.067 Sum_probs=81.7
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|++||+|+.|+.++|..+.++. .....++..++.++++|+++.++||.
T Consensus 76 y~eDi~Lm~elG~~~yRfSIsWsRI~P~G-------------------------~~g~~N~~Gl~fY~~lid~l~~~GIe 130 (481)
T 3qom_A 76 YPEDIELFAEMGFKCFRTSIAWTRIFPNG-------------------------DESEPNEAGLQFYDDLFDECLKNGIQ 130 (481)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSSSS-------------------------CCSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHcCCCEEEecCcHHHcCcCC-------------------------CCCCcCHHHHHHHHHHHHHHHHCCCe
Confidence 58999999999999999999997665521 01123567899999999999999999
Q ss_pred EEEecCCC-CCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHIS-KPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~~-~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.||.+|+. -|.|.... -.||-+ + ...+.|.++-+.+++||++. |--+-.+|||.
T Consensus 131 P~VTL~H~DlP~~L~~~--yGGW~n-r-~~v~~F~~YA~~~f~~fgdr--Vk~W~T~NEp~ 185 (481)
T 3qom_A 131 PVVTLAHFEMPYHLVKQ--YGGWRN-R-KLIQFYLNFAKVCFERYRDK--VTYWMTFNEIN 185 (481)
T ss_dssp EEEEEESSCCBHHHHHH--HCGGGS-T-HHHHHHHHHHHHHHHHTTTT--CCEEEEETTGG
T ss_pred EEEEEccCCCCHHHHhh--cCCCCC-H-HHHHHHHHHHHHHHHHhCCc--CCEEEEccCcc
Confidence 99999664 34442110 024433 2 23688999999999999986 44567899996
|
| >1ggp_B TKL-1, protein (lectin 1 B chain); sugar binding protein; 2.70A {Trichosanthes kirilowii} SCOP: b.42.2.1 b.42.2.1 | Back alignment and structure |
|---|
Probab=98.03 E-value=7.2e-06 Score=81.50 Aligned_cols=95 Identities=18% Similarity=0.302 Sum_probs=72.3
Q ss_pred CCCceeeeecCCCCceecCCCCC---CCCccccCCcceeec-ccceEEeecc--CCccceeccccC-CCCCceeEeeccc
Q 008330 417 PATGLCVQRKSFLDPLTLGPCTE---SEAWSYTPHKTISLK-GAYFCLQAKH--VGKPAKLGIICT-DCGSTWEIISDSK 489 (570)
Q Consensus 417 ~~tg~c~~~~~~~~~~~~~~c~~---~~~W~~~~~~~~~~~-~~~~cl~a~~--~g~~~~~~~~c~-~~~~~W~~~s~~~ 489 (570)
-.+++|+++.+...++.+++|.. ++.|.+++++.|+.. ...+||++.+ .|.++.+ .+|. +.+|+|+.-.++.
T Consensus 137 g~~~~Cld~~~~g~~v~l~~C~~~~~~Q~W~~~~~g~ir~~~~~~~Cl~~~~~~~g~~V~l-~~C~g~~~Q~W~~~~~g~ 215 (254)
T 1ggp_B 137 GSAQLCMQAGNGPANLWMSECRAGKAEQQWALLTDKSIRSETNSDNCLTSAADAGPKTILL-ALCSGPASQRWVFDDDGS 215 (254)
T ss_dssp CGGGCEECCCTTTTBCCEECCCSSCTTSEEEEETTTEEEESSCTTEEECCCCCSSCCCCBE-EECCCCTTSCCEECTTSS
T ss_pred ccCCeeEecCCCCceEEEEcCCCCCccCEEEEcCCCCEEEeCCCCeEEecCCCCCCCEEEE-EcCCCCccceEEECCCCc
Confidence 34789999865446699999976 479999999988753 5789999865 3777777 8998 7789999977665
Q ss_pred cEEEEecCCCceEEEeecC---CC-ceeecce
Q 008330 490 MHLSSKADNGTTVCLDVDS---SN-TIVTNTC 517 (570)
Q Consensus 490 ~~~~~~~~~~~~~cld~~~---~~-~~~~~~c 517 (570)
+ . ...+++|||+.. ++ .|+.+.|
T Consensus 216 i--~---~~~sg~CLd~~~~~~~~~~v~~~~c 242 (254)
T 1ggp_B 216 I--L---SLYDDKQMDSEGAAAAAKQIILWWN 242 (254)
T ss_dssp E--E---ETTTTEEEEESSSCCSSSCEEEECC
T ss_pred E--E---eCCCCeEEeCCCCCCCCceEEEEcC
Confidence 3 2 235789999963 44 5777877
|
| >2vlc_A Cinnamomin, type 2 ribosome-inactivating protein cinnamomin III; ribosome inhibiting proteins, toxin, hydrolase, plant defense; HET: AS5 BMA XYP XYS; 2.95A {Cinnamomum camphora} | Back alignment and structure |
|---|
Probab=98.02 E-value=6.8e-06 Score=91.23 Aligned_cols=99 Identities=21% Similarity=0.419 Sum_probs=72.1
Q ss_pred ccceeeCCCCceeeeecCC----CCceecCCC--CC--CCCccccCCcceeecccceEEeecc--CCccceeccccCC--
Q 008330 410 LHKVIYHPATGLCVQRKSF----LDPLTLGPC--TE--SEAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICTD-- 477 (570)
Q Consensus 410 ~~~~~~~~~tg~c~~~~~~----~~~~~~~~c--~~--~~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~~-- 477 (570)
+...+.. .+|+|+++.+. ..++.+++| ++ +|+|.++++|.|+. .++||++.| .|.++.+ ++|.+
T Consensus 316 ~~~~I~~-~sg~CLDv~g~~~~~G~~v~l~~C~~~g~~nQ~W~~~~~G~ir~--~g~CLdv~g~~~G~~V~~-~~C~g~~ 391 (570)
T 2vlc_A 316 PTVRISG-RNGLCVRVRDGKYNNGNPIQLWPCKQNSDVNQLWTLRRDGTIRS--NGKCLTTNGYSAGDYVMI-YDCRTPV 391 (570)
T ss_dssp CEECEEE-GGGCEEEEGGGCCSTTCBEEEECCCCSCCGGGCEEECTTSBEEE--TTEEEEESCSSTTCBEEE-ECCCSSC
T ss_pred CeEEEEC-CCCCeEEcCCCCCCCCceEEEEecCCCCChhceEEEcCCceEEE--CCeEEcccCCCCCceEEE-EecCCCC
Confidence 3334444 49999998532 367999999 54 37999999998876 579999976 4666666 99974
Q ss_pred -CCCceeEeeccccEEEEecCCCceEEEeecC--CC-ceeecce
Q 008330 478 -CGSTWEIISDSKMHLSSKADNGTTVCLDVDS--SN-TIVTNTC 517 (570)
Q Consensus 478 -~~~~W~~~s~~~~~~~~~~~~~~~~cld~~~--~~-~~~~~~c 517 (570)
.+|+|++..++. |.. ..+++|||+.+ +| .++.+.|
T Consensus 392 ~~nQ~W~~~~~G~--i~n---~~Sg~CLDv~~~~~g~~v~~~~C 430 (570)
T 2vlc_A 392 TAASIWQFWANGT--IIN---PQSALVLSAESGNPRTTLTVQAD 430 (570)
T ss_dssp CGGGBCEECTTSC--EEE---TTTTEEEECSSSSTTCBCEEECC
T ss_pred CCCceEEEccCCe--EEE---CCCCceEecCCCcceeeEEEEcc
Confidence 589999987765 322 35789999974 44 5666777
|
| >3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=7.7e-06 Score=88.72 Aligned_cols=107 Identities=15% Similarity=0.039 Sum_probs=82.1
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|++||+|+.|+.++|.-+.++ | .+...|+..++.++++|+++.++||.
T Consensus 68 y~EDi~Lm~elG~~~yRfSIsWsRI~P~---------------------G----~~g~~N~~Gl~fY~~lId~Ll~~GIe 122 (487)
T 3vii_A 68 YKEDVKILKELGAQVYRFSISWARVLPE---------------------G----HDNIVNQDGIDYYNNLINELLANGIE 122 (487)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSTT---------------------S----STTCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHcCCCEEEeeCCHHHcCcC---------------------C----CCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 6899999999999999999999766542 1 01234678999999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNEL 216 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP 216 (570)
.|+.+|+.. |.|.. +-.||-+.. ..+.|.++-+.+.++|++. |--+=.+|||
T Consensus 123 P~VTL~H~DlP~~L~---~~GGW~nr~--~v~~F~~YA~~~f~~fgdr--Vk~W~T~NEp 175 (487)
T 3vii_A 123 PMVTMYHWDLPQALQ---DLGGWPNLV--LAKYSENYARVLFKNFGDR--VKLWLTFNEP 175 (487)
T ss_dssp EEEEEESSCCBHHHH---TTTSTTSTH--HHHHHHHHHHHHHHHHTTT--CCEEEEEECH
T ss_pred EEEEEecCCCcHHHH---HcCCCCCHH--HHHHHHHHHHHHHHHhcCC--CCeEEEecCc
Confidence 999987753 44432 123554432 4788999999999999996 3345688998
|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=9e-06 Score=88.52 Aligned_cols=100 Identities=23% Similarity=0.510 Sum_probs=73.2
Q ss_pred CceeeeecCC--CCceecCCCCC---CCCccccCCcceeecccceEEeecc--CCccceeccccC--CCCCceeEeeccc
Q 008330 419 TGLCVQRKSF--LDPLTLGPCTE---SEAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICT--DCGSTWEIISDSK 489 (570)
Q Consensus 419 tg~c~~~~~~--~~~~~~~~c~~---~~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~--~~~~~W~~~s~~~ 489 (570)
+|+|+++.+. ..++.+++|.+ +|.|+++.+++|+ .+++||++.+ .|.++.+ +.|. +.+|+|+...++.
T Consensus 383 ~~~Cld~~~~~~~~~v~l~~C~g~~~nQ~w~~~~~g~i~--~~~~Cld~~~~~~g~~v~l-~~C~~~~~~Q~W~~~~~~~ 459 (501)
T 2ffu_A 383 GTNCLDTLGHFADGVVGVYECHNAGGNQEWALTKEKSVK--HMDLCLTVVDRAPGSLIKL-QGCRENDSRQKWEQIEGNS 459 (501)
T ss_dssp TTEEEECTTCCTTCCCEEEECCSSCGGGCEEECTTSCEE--ETTEEEECSCCSTTCBCEE-EECCTTCGGGCEEEETTTT
T ss_pred cCccccccCCCCCCEEEEEEcCCCCcceEEEEecCCcee--eccccceeccCCCCCeEEE-EecCCCCcCceEEEECCCC
Confidence 8999999442 35699999986 3789999999876 4789999875 5777777 9997 4579999976332
Q ss_pred cEEEEecCCCceEEEeecC-CC-ceeecceeeeCCCCCCCccCce
Q 008330 490 MHLSSKADNGTTVCLDVDS-SN-TIVTNTCKCLSRDKTCDPASQW 532 (570)
Q Consensus 490 ~~~~~~~~~~~~~cld~~~-~~-~~~~~~c~c~~~~~~~~~~~~~ 532 (570)
+|. ...+++|||+.. +| .++.+.| +. .+..||
T Consensus 460 -~i~---~~~sg~CLd~~~~~~~~~~~~~C---~~----~~~Q~W 493 (501)
T 2ffu_A 460 -KLR---HVGSNLCLDSRTAKSGGLSVEVC---GP----ALSQQW 493 (501)
T ss_dssp -EEE---ETTSSEEEECTTGGGTSCEEEEC---CS----CGGGCC
T ss_pred -eEE---eCCCCeEEeeecCCCCeEEEEeC---CC----CCcceE
Confidence 232 235789999963 44 6677877 22 356677
|
| >4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=5.8e-06 Score=90.11 Aligned_cols=110 Identities=13% Similarity=0.032 Sum_probs=81.8
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|+.|+.++|..+.++. +. ....++..++.++++|+++.++||.
T Consensus 78 YkEDi~Lm~elG~~~yRfSIsWsRI~P~g----~~--------------------~g~~N~~Gl~~Y~~lid~l~~~GI~ 133 (513)
T 4atd_A 78 YKEDVNILKNLGLDAYRFSISWSRVLPGG----RL--------------------SGGVNKEGINYYNNLIDGLLANGIK 133 (513)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSTTS----SG--------------------GGCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHcCCCEEEEeCcHHHcCCCC----CC--------------------CCCcCHHHHHHHHHHHHHHHHcCCE
Confidence 58999999999999999999997665421 00 0113567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.||.+|+.. |.|.... -.||-+. ...+.|.++-+.+++||++. |--+-.+|||.
T Consensus 134 P~VTL~H~dlP~~L~~~--yGGW~nr--~~v~~F~~YA~~~f~~fgdr--Vk~WiT~NEp~ 188 (513)
T 4atd_A 134 PFVTLFHWDVPQALEDE--YGGFLSP--RIVDDFCEYAELCFWEFGDR--VKHWMTLNEPW 188 (513)
T ss_dssp EEEEEESSCCBHHHHHH--HCGGGST--THHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred EEEEecCCCCcHHHHHH--cCCcCCH--HHHHHHHHHHHHHHHHhcCc--CceEEEccCcc
Confidence 999987653 4442210 0244433 24689999999999999997 44466899985
|
| >3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A | Back alignment and structure |
|---|
Probab=97.93 E-value=0.00014 Score=74.62 Aligned_cols=224 Identities=14% Similarity=0.036 Sum_probs=122.8
Q ss_pred EeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCC
Q 008330 58 CVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVD 137 (570)
Q Consensus 58 GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~ 137 (570)
||||.-. |-.-.+.+++++.+++.|++.||| |+ . +
T Consensus 4 Gv~yG~~-------~~nlp~p~~Vv~llks~gi~~VRl-----------Y~----------------------~-----D 38 (323)
T 3ur8_A 4 GVCYGKI-------ANNLPSDQDVIKLYNANNIKKMRI-----------YY----------------------P-----H 38 (323)
T ss_dssp EEEECCC-------SSSCCCHHHHHHHHHHTTCCEEEE-----------SS----------------------C-----C
T ss_pred eEEcCcC-------CCCCCCHHHHHHHHHhCCCCeEEe-----------cC----------------------C-----C
Confidence 8998422 112234678899999999999999 21 0 0
Q ss_pred chHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 138 LPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 138 ~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
..++.+++..||.|+|.+-...- .....++...+..+.-...|....+|.++-+-||.-
T Consensus 39 -------~~vL~Al~~sgi~V~lGV~n~~l--------------~~la~~~~A~~WV~~nV~~y~~~~~I~~IaVGNEvl 97 (323)
T 3ur8_A 39 -------TNVFNALKGSNIEIILDVPNQDL--------------EALANPSNANGWVQDNIRNHFPDVKFKYIAVGNEVD 97 (323)
T ss_dssp -------HHHHHHHTTCCCEEEEEECGGGT--------------GGGGSHHHHHHHHHHHTGGGTTTSEEEEEEEEESCC
T ss_pred -------HHHHHHHHhcCCeEEEeccccch--------------hhhhhHHHHHHHHHHHHhhhCCCceEEEEEEccccc
Confidence 36888889999999998753210 000112222222344555676678899999999986
Q ss_pred CCCC---ChhHHHHHHHHHHHHHHhcCCC--cEEEEeC--CCCCC-----------cchhhhhccc-CcCCCCCEEEEEe
Q 008330 218 GPKQ---NVKDWYRYMQLGAEAVHAANPE--VLVILSG--LNFDK-----------DLSFVRNQAV-NLTFTGKLVFEAH 278 (570)
Q Consensus 218 ~~~~---~~~~W~~~~~~~~~aIr~~dp~--~lIiVeG--~~w~~-----------dl~~~~~~p~-~l~~~~nlVys~H 278 (570)
.... .......+|+.+-.++++.+=. .-|...- .-|.+ ++... ..|+ ++-...+--+.+|
T Consensus 98 ~~~~~~~~~~~Lvpam~nv~~aL~~aGl~~~IkVsT~~~~~v~~~s~pPS~g~F~~~~~~~-~~pil~fL~~~~sp~~vN 176 (323)
T 3ur8_A 98 PGRESGKYARFVGPAMENIYNALSSAGLQNQIKVSTSTYSGLLTNTYPPRDSIFREEYKSF-INPIIGFLARHNLPLLAN 176 (323)
T ss_dssp TTSGGGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGEECCSSGGGCEECGGGHHH-HHHHHHHHHHTTCCEEEE
T ss_pred cCCCcccCHHHHHHHHHHHHHHHHHCCCCCCceeeeeeeccccccCCCCCcceechhHHHH-HHHHHHHHHhcCCeeEEe
Confidence 5431 2566778888888888887654 3333321 11211 11110 0111 1100123345677
Q ss_pred ecCCCCCC------C----CCCC--CCcchhhHHHHH-HHHHHHHHHh---cCCCeEEeccccCCCCCC----cchHHHH
Q 008330 279 WYGFTDGQ------A----WVDG--NPNQVCGRVVDN-VMRLSGFLLE---QGWPLFVSEFGADLRGNN----VNDNRYL 338 (570)
Q Consensus 279 ~Y~~~~~~------~----w~~~--~~~~~~~~~~~~-~~~~~g~l~~---~g~Pv~iGEFG~~~~~~~----~~~~~~~ 338 (570)
.|++..+. + -+.. +....+.++.+. ++....-+.+ .++||+|||.|.+..+.. ....+|.
T Consensus 177 ~yPyf~~~~~~~~i~l~yAlf~~~~d~~~~Y~nlfDa~~Da~~~Al~~~g~~~~~v~vsEtGWPs~G~~~as~~na~~y~ 256 (323)
T 3ur8_A 177 IYPYFGHIDNTNAVPLSYALFNQQRRNDTGYQNLFDALVDSMYFATEKLGGQNIEIIVSESGWPSEGHPAATLKNARTYY 256 (323)
T ss_dssp CCHHHHHHHCTTTSCHHHHHTCCSSCCTTSCSSHHHHHHHHHHHHHHTTTCTTCCEEEEEECCCSSSBTTBCHHHHHHHH
T ss_pred cchhhhhccCCCCCChhhhccccCCCccchHHHHHHHHHHHHHHHHHHcCCCCceEEeccccCCCCCCCCCCHHHHHHHH
Confidence 77643320 0 0000 000112233332 2222222222 678999999999987642 1246788
Q ss_pred HHHHHHHHHC
Q 008330 339 NCFFGVAAEL 348 (570)
Q Consensus 339 ~~~~~~~~~~ 348 (570)
+.++..+.+.
T Consensus 257 ~~li~~~~~~ 266 (323)
T 3ur8_A 257 TNLINHVKRG 266 (323)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhcC
Confidence 8888877654
|
| >2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A | Back alignment and structure |
|---|
Probab=97.92 E-value=0.00093 Score=73.09 Aligned_cols=94 Identities=14% Similarity=0.188 Sum_probs=65.5
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHH--------HHHHHHHHhCC-CC-cEEEEecc
Q 008330 144 FQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIK--------GLTKMATIFNG-VR-NVVGMSLR 213 (570)
Q Consensus 144 ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~--------~w~~iA~ryk~-~p-~Vig~dL~ 213 (570)
+++++++|.+.|+.+++-+-.... ...+...|++ -|..+-.++.- +| +|--+||.
T Consensus 117 ~def~~~~~~~G~ep~~~vn~g~~---------------~~~~a~~~vey~n~~~~t~~~~lR~~~G~~ep~~vkyweiG 181 (513)
T 2c7f_A 117 INEFAKWCKKVNAEIMMAVNLGTR---------------GISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLG 181 (513)
T ss_dssp THHHHHHHHHTTCEEEEECCCSSC---------------CHHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEES
T ss_pred HHHHHHHHHHcCCeEEEEEeCCCC---------------CHHHHHHHHHHhCCCCCChHHHHHHHcCCCCCCCceEEEec
Confidence 689999999999999997643210 0011223332 24455566642 23 56679999
Q ss_pred CCCCCCCC----ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCC
Q 008330 214 NELRGPKQ----NVKDWYRYMQLGAEAVHAANPEVLVILSGLN 252 (570)
Q Consensus 214 NEP~~~~~----~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~ 252 (570)
|||.+.++ +.+++.+.+.+.++|||+++|+..|+..|..
T Consensus 182 NE~~g~w~~g~~t~~~Y~~~~~~~a~a~k~~dP~i~via~G~~ 224 (513)
T 2c7f_A 182 NAMDGPWQVGHKTMDEYGRIAEETARAMKMIDPSIELVACGSS 224 (513)
T ss_dssp CCCCCTTSTTCCCHHHHHHHHHHHHHHHHHHCTTCEEEECCCS
T ss_pred cCcccccccCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 99987642 5677888889999999999999887776654
|
| >3aj6_A Main hemagglutinin component; toxin, beta-trefoil; HET: NGA; 1.48A {Clostridium botulinum} PDB: 1qxm_A 3aj5_A* 2ehm_A* 2ehi_A* 2ehn_A* 3ah1_A* 3ah2_A* 3ah4_A* 2e4m_A | Back alignment and structure |
|---|
Probab=97.91 E-value=2.6e-05 Score=79.04 Aligned_cols=106 Identities=12% Similarity=0.091 Sum_probs=71.9
Q ss_pred cceeeCCCCceeeeecCCCCceecCCCCCC--CCccccCCc-----ceeecccceEEeecc-CCccceeccccC-CCCCc
Q 008330 411 HKVIYHPATGLCVQRKSFLDPLTLGPCTES--EAWSYTPHK-----TISLKGAYFCLQAKH-VGKPAKLGIICT-DCGST 481 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~~~~~~~~~c~~~--~~W~~~~~~-----~~~~~~~~~cl~a~~-~g~~~~~~~~c~-~~~~~ 481 (570)
|.+.-...+|+|+++....+.+++++|+++ ++|+++.++ .|+-+.+++||+..+ +|.++.+ ++|. ..+|+
T Consensus 152 Y~i~~~~~sgk~lDv~~~g~~V~~w~~~g~~nQ~W~~~~~~~~~~y~i~~~~s~~~l~~~s~~g~~v~~-~~~~g~~~Q~ 230 (286)
T 3aj6_A 152 CKLQTQLNSDRFLSKNLNSQIIVLWQWIDSSRQKWIIEYNETKSAYTLKCQENNRYLTWIQNSNNYVET-YQSTDSLIQY 230 (286)
T ss_dssp EEEEETTCTTCEEEECTTSSBEEEECCCCCGGGCEEEEEETTTTEEEEEETTTCCEEEECCSTTCBEEE-ECCCSSGGGC
T ss_pred EEEEecCCCceEEEecCCCceEEEeCCCCCccceEEEEECCCCCeEEEEECCCCEEEeccCCCCCEEEE-EeCCCCcccE
Confidence 344444467899999544467999999886 799997432 344456789998744 5655444 7998 66899
Q ss_pred eeEee--ccccEEEEecCCCceEEEeecC----CC-ceeecce
Q 008330 482 WEIIS--DSKMHLSSKADNGTTVCLDVDS----SN-TIVTNTC 517 (570)
Q Consensus 482 W~~~s--~~~~~~~~~~~~~~~~cld~~~----~~-~~~~~~c 517 (570)
|++.. .+..++..+....+++||||.+ || .|..+.|
T Consensus 231 W~~~~~~~~~G~y~i~n~~~sgk~LDV~~~stanGt~v~~w~~ 273 (286)
T 3aj6_A 231 WNINYLDNDASKYILYNLQDTNRVLDVYNSQIANGTHVIVDSY 273 (286)
T ss_dssp EEEEEETTEEEEEEEEETTEEEEEEEEGGGCCSTTCBEEEEEC
T ss_pred EEEEeccCCCCEEEEEECCCCCeEEEeCCCCCCCCCEEEEEcC
Confidence 99943 5554444443334789999972 67 5555765
|
| >3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=1.8e-05 Score=72.33 Aligned_cols=100 Identities=13% Similarity=0.071 Sum_probs=71.3
Q ss_pred cceeeCCC-CceeeeecCC----CCceecCCCCCC--CC----ccccC--C---cceeecccceEEeeccC----Cccce
Q 008330 411 HKVIYHPA-TGLCVQRKSF----LDPLTLGPCTES--EA----WSYTP--H---KTISLKGAYFCLQAKHV----GKPAK 470 (570)
Q Consensus 411 ~~~~~~~~-tg~c~~~~~~----~~~~~~~~c~~~--~~----W~~~~--~---~~~~~~~~~~cl~a~~~----g~~~~ 470 (570)
.+.|.... ||+|+++.+. .+++.+++|+++ ++ |.+++ + +..+|+.-++||++.+. |.++.
T Consensus 6 ~Y~I~n~~~sgk~lDv~~~sta~Gt~V~~w~~~g~~nQ~~~~~W~~~~~~~~~~g~y~i~n~G~~Ldv~~~~ta~Gt~v~ 85 (148)
T 3nbc_A 6 TYNITNVAYTNRLIDLTGSNPAENTLIIGHHLNKTPSGYGNQQWTLVQLPHTTIYTMQAVNPQSYVRVRDDNLVDGAALV 85 (148)
T ss_dssp EEEEEESSCTTCEEEEGGGCCSTTEEEEEECCCSTTTCCGGGCEEEEECTTSSEEEEEESSSCCEEEEGGGCCSTTCBEE
T ss_pred EEEEEEecCCCCeEECCCCcCCCCcEEEEeCCCCChhheeecEEEEEECCCcccceEEEEECCcEEEccCCCCCCCcEEe
Confidence 37777888 9999999552 367999999986 68 99975 3 55566555899998764 55554
Q ss_pred eccccCCCCCceeEee---ccccEEEEecCCCceEEEeecC--CC-ceeecce
Q 008330 471 LGIICTDCGSTWEIIS---DSKMHLSSKADNGTTVCLDVDS--SN-TIVTNTC 517 (570)
Q Consensus 471 ~~~~c~~~~~~W~~~s---~~~~~~~~~~~~~~~~cld~~~--~~-~~~~~~c 517 (570)
. .. .+|+|++.+ ++..+|. ...+.+|||+.+ || .|+.+.|
T Consensus 86 ~-~~---~~q~W~i~~~~~~G~y~I~---~~~sg~~Ldv~stanGt~i~~w~~ 131 (148)
T 3nbc_A 86 G-SQ---QPTPVSIESAGNSGQFRIK---IPNLGLALTLPSDANSTPIVLGEV 131 (148)
T ss_dssp E-ES---SCCCEEEEECSSTTCEEEE---CTTSSEEEECCCSSTTEECEEEEC
T ss_pred c-CC---CCcEEEEEEccCCCeEEEE---eCCCCeEEEeecCCCCcEEEEecC
Confidence 4 33 368999987 4444553 347899999974 66 4555665
|
| >3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=1.5e-05 Score=86.91 Aligned_cols=110 Identities=15% Similarity=0.067 Sum_probs=81.4
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|++||+|+.|+.++|.-+.++. +. -.-.++..++.++++|+++.++||.
T Consensus 90 ykEDi~Lm~elG~~~yRfSIsWsRI~P~g----~~--------------------~g~vN~~Gl~fY~~lid~l~~~GIe 145 (505)
T 3ptm_A 90 YKEDVRLMKDMGMDAYRFSISWTRILPNG----SL--------------------RGGVNKEGIKYYNNLINELLSKGVQ 145 (505)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSTTS----SS--------------------TTCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHcCCCEEEeeccHHHcCcCC----CC--------------------CCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 58999999999999999999997665421 00 0123567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.||.+|+.. |.|.... -.||-+. ...+.|.++-+.+++||++. |--+-.+|||.
T Consensus 146 P~VTL~HwDlP~~L~~~--yGGW~nr--~~v~~F~~YA~~~f~~fgDr--Vk~W~T~NEp~ 200 (505)
T 3ptm_A 146 PFITLFHWDSPQALEDK--YNGFLSP--NIINDFKDYAEICFKEFGDR--VKNWITFNEPW 200 (505)
T ss_dssp EEEEEESSCCBHHHHHH--HCGGGST--HHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred EEEEecCCCCcHHHHHh--cCCcCCH--HHHHHHHHHHHHHHHHhCcc--CceEEEecCcc
Confidence 999997643 4442210 0244332 23688999999999999986 44467889985
|
| >3a07_A Actinohivin; carbohydrate-binding module family 13, antiviral protein, LE; 1.19A {Actinomycete} | Back alignment and structure |
|---|
Probab=97.85 E-value=1.7e-05 Score=69.22 Aligned_cols=70 Identities=14% Similarity=0.246 Sum_probs=57.1
Q ss_pred ceeeCCCCceeeeecCCCCceecCCCCCC--CCccccCCcceeecccceEEeeccCCccceeccccC-CCCCceeE
Q 008330 412 KVIYHPATGLCVQRKSFLDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKHVGKPAKLGIICT-DCGSTWEI 484 (570)
Q Consensus 412 ~~~~~~~tg~c~~~~~~~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~~g~~~~~~~~c~-~~~~~W~~ 484 (570)
..+.+..+|+|+++.+. .++.+++|.++ ++|.++..+.|+-+.+++||++.+.|+ +. .+.|. +++|+|++
T Consensus 45 g~i~~~~sg~CLd~~~~-~~v~~~~C~g~~~Q~W~~~~~g~i~~~~sg~cLdv~~~~~-v~-~~~c~g~~~Q~W~~ 117 (118)
T 3a07_A 45 GTVRNAQTGRCLDSNYD-GAVYTLPCNGGSYQKWLFYSNGYIQNVETGRVLDSNYNGN-VY-TLPANGGNYQKWYT 117 (118)
T ss_dssp SCCEETTTCCEEEECTT-CBEEEECCCCCGGGCEEECTTSCEEETTTCCEEEECTTCC-EE-EECCCCCGGGCEEE
T ss_pred EEEEECCCCcEEecCCC-CeEEEEccCCCccceEEEeCCCEEEECCCCcEEEcCCCCE-EE-EEcCCCChhceEec
Confidence 35667789999999665 35999999875 799999888887778999999998775 44 48998 77899986
|
| >2vlc_A Cinnamomin, type 2 ribosome-inactivating protein cinnamomin III; ribosome inhibiting proteins, toxin, hydrolase, plant defense; HET: AS5 BMA XYP XYS; 2.95A {Cinnamomum camphora} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.4e-05 Score=88.71 Aligned_cols=94 Identities=21% Similarity=0.431 Sum_probs=72.0
Q ss_pred CCCceeeeecCCCCceecCCCCCC---CCccccCCcceeec-ccceEEee-cc--CCccceecccc-C-CCCCceeEeec
Q 008330 417 PATGLCVQRKSFLDPLTLGPCTES---EAWSYTPHKTISLK-GAYFCLQA-KH--VGKPAKLGIIC-T-DCGSTWEIISD 487 (570)
Q Consensus 417 ~~tg~c~~~~~~~~~~~~~~c~~~---~~W~~~~~~~~~~~-~~~~cl~a-~~--~g~~~~~~~~c-~-~~~~~W~~~s~ 487 (570)
..+|+|+++.+ .++.+++|.++ +.|.+++++.|+.. ++++||++ .+ .|.++.+ ..| . +++|+|.+.++
T Consensus 453 ~~s~~CLD~~g--~~v~l~~C~g~~~~Q~W~~~~dG~ir~~~~~~~CLd~~~~~~~G~~V~l-~~C~~~~~~Q~W~~~~~ 529 (570)
T 2vlc_A 453 GFNDLCMQANG--DAMWVVECESSKAEQKWALYPDGSIRPHQDRDRCLTSTDNHSQGSIIII-SSCSPGSEGQRWVFMND 529 (570)
T ss_dssp CGGGEEEEEET--TEEEEEECCTTCSTTCEEECTTSCEEETTCTTEEEEESCTTSTTCBEEE-EESTTCCGGGCCEECTT
T ss_pred cccceeccccc--cceEEEecCCCCcCcEEEEcCCCeEEECCCCCeEeccccccCCCCEEEE-EeCCCCCCCCEEEEcCC
Confidence 34899999854 45999999864 79999999988864 67899998 33 4777766 899 4 77899999887
Q ss_pred cccEEEEecCCCceEEEeecC---CC-ceeeccee
Q 008330 488 SKMHLSSKADNGTTVCLDVDS---SN-TIVTNTCK 518 (570)
Q Consensus 488 ~~~~~~~~~~~~~~~cld~~~---~~-~~~~~~c~ 518 (570)
+. |. ...+++|||+.+ +| +|+.+.|.
T Consensus 530 G~--i~---n~~sg~cLDv~~~~~~g~~v~~~~c~ 559 (570)
T 2vlc_A 530 GT--IL---NLKNGLVMDVKGSDPSLHQIIIWPAT 559 (570)
T ss_dssp SS--EE---CTTTCCEEEEGGGCGGGCCEEEECCC
T ss_pred CC--EE---ECCCCcEEeccCCCCCCCeEEEEcCC
Confidence 75 32 235789999963 34 67778873
|
| >1abr_B Abrin-A; glycosidase/carbohydrate complex, lectin, lectin (agglutinin), glycoprotein, plant SEED protein, plant toxin; HET: NDG NGZ MAN BMA BGC; 2.14A {Abrus precatorius} SCOP: b.42.2.1 b.42.2.1 PDB: 2zr1_B* 2q3n_B* | Back alignment and structure |
|---|
Probab=97.79 E-value=3.7e-05 Score=76.89 Aligned_cols=87 Identities=15% Similarity=0.274 Sum_probs=66.6
Q ss_pred CceeeeecCC--CCceecCCCCCC----CCccccCCcceeecccceEEeeccC--CccceeccccC-CCCCceeEeeccc
Q 008330 419 TGLCVQRKSF--LDPLTLGPCTES----EAWSYTPHKTISLKGAYFCLQAKHV--GKPAKLGIICT-DCGSTWEIISDSK 489 (570)
Q Consensus 419 tg~c~~~~~~--~~~~~~~~c~~~----~~W~~~~~~~~~~~~~~~cl~a~~~--g~~~~~~~~c~-~~~~~W~~~s~~~ 489 (570)
+|+|+++.+. ..++.+++|.++ ++|.++.++.|+-+.+++||++.+. |.++.+ +.|. .++|+|++..+..
T Consensus 65 ~g~CLdv~g~~~g~~v~~~~c~~~~~~~Q~W~~~~~G~i~n~~sg~cLd~~~~~~g~~v~~-~~c~g~~~Q~W~~~~~~~ 143 (267)
T 1abr_B 65 NGKCLTTYGYAPGSYVMIYDCTSAVAEATYWEIWDNGTIINPKSALVLSAESSSMGGTLTV-QTNEYLMRQGWRTGNNTS 143 (267)
T ss_dssp TTEEEEESCSSTTCBEEEECTTTSCGGGSBCEECTTSCEEETTTTEEEECCCSSTTCBCEE-ECCCCCGGGCCEESSCCC
T ss_pred CCEEEcccCCCCCCEEEEEeCCCCCCccCEEEEecCCcEEeCCCCcEEeccCCCCCcEEEE-EeCCCCccceEEEcCCcc
Confidence 6899999642 356999999874 7999998888877789999998873 666666 8999 7789999987665
Q ss_pred cEEEEecCCCceEEEeec
Q 008330 490 MHLSSKADNGTTVCLDVD 507 (570)
Q Consensus 490 ~~~~~~~~~~~~~cld~~ 507 (570)
..+.... ..+.+|||++
T Consensus 144 ~~~~~~~-~~~~~CL~~~ 160 (267)
T 1abr_B 144 PFVTSIS-GYSDLCMQAQ 160 (267)
T ss_dssp CEEECEE-CGGGCEEEEE
T ss_pred ceEEEee-cccCcCeecC
Confidence 5433322 2467899884
|
| >1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00019 Score=73.29 Aligned_cols=119 Identities=13% Similarity=0.111 Sum_probs=75.7
Q ss_pred EeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCC
Q 008330 58 CVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVD 137 (570)
Q Consensus 58 GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~ 137 (570)
||||.-. |-.-.+.+++++.+++.|++.||| ++. +
T Consensus 2 Gv~yg~~-------~~nlp~~~~vv~llk~~~i~~VRl-Y~~-------------------------------------d 36 (306)
T 1aq0_A 2 GVCYGMS-------ANNLPAASTVVSMFKSNGIKSMRL-YAP-------------------------------------N 36 (306)
T ss_dssp EEECCCC-------CSSCCCHHHHHHHHHHHTCCEEEE-SSC-------------------------------------C
T ss_pred eEecccC-------CCCCCCHHHHHHHHHhcCCCEEEE-cCC-------------------------------------C
Confidence 8898422 222234678899999999999999 211 0
Q ss_pred chHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 138 LPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 138 ~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
..++.+++..||.|+|.+-...- . . . ..+++...+..+.-...| ...+|.++-+-||+-
T Consensus 37 -------~~vL~A~~~tgi~v~lgv~n~~~-------~--~-~---a~~~~~a~~wv~~nv~~y-~~~~I~~I~VGNEvl 95 (306)
T 1aq0_A 37 -------QAALQAVGGTGINVVVGAPNDVL-------S--N-L---AASPAAAASWVKSNIQAY-PKVSFRYVCVGNEVA 95 (306)
T ss_dssp -------HHHHHHHTTSCCEEEEEECGGGH-------H--H-H---HHCHHHHHHHHHHHTTTC-TTSEEEEEEEEESCC
T ss_pred -------HHHHHHHHhcCCEEEEecccchh-------h--H-h---hhCHHHHHHHHHHhhccC-CCccEEEEEeccccc
Confidence 35678888999999998653210 0 0 0 001222222223333445 456788999999996
Q ss_pred CCCCChhHHHHHHHHHHHHHHhcCCCc
Q 008330 218 GPKQNVKDWYRYMQLGAEAVHAANPEV 244 (570)
Q Consensus 218 ~~~~~~~~W~~~~~~~~~aIr~~dp~~ 244 (570)
.. . ......+|+.+-.++++.+-..
T Consensus 96 ~g-~-~~~L~~am~~v~~aL~~~gl~~ 120 (306)
T 1aq0_A 96 GG-A-TRNLVPAMKNVHGALVAAGLGH 120 (306)
T ss_dssp GG-G-GGGHHHHHHHHHHHHHHTTCTT
T ss_pred CC-C-HHHHHHHHHHHHHHHHHCCCCc
Confidence 52 2 6677788888888888876554
|
| >3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.014 Score=63.61 Aligned_cols=204 Identities=16% Similarity=0.040 Sum_probs=109.4
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCCccccCCCCC---CC-CCCCCCCHHHHHHHHHHHHHHhCCC-CcEEEEeccCCC--
Q 008330 144 FQAVVASLGNNNVMVILDNHISKPGWCCSNSDGN---GF-FGDQYFNPDLWIKGLTKMATIFNGV-RNVVGMSLRNEL-- 216 (570)
Q Consensus 144 ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgn---g~-~~d~~~~~~~~~~~w~~iA~ryk~~-p~Vig~dL~NEP-- 216 (570)
...+++.|.++|..-|+-.-.++|.|-....... +- ..-+....+.|.+++.+.++.|+.+ =.|-++.+.|||
T Consensus 110 ~~~~lk~A~~~~~~~i~aspWSpP~wMk~ng~~~~~~g~~~~L~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~ 189 (507)
T 3clw_A 110 QQWFMKAARERGMNNFLFFTNSAPYFMTRSASTVSTDQDCINLQNDKFDDFARFLVKSAQHFREQGFHVNYISPNNEPNG 189 (507)
T ss_dssp HHHHHHHHHHTTCCCEEEECSSCCGGGSSSSSSSCCCSSSCSSCTTCHHHHHHHHHHHHHHHHHTTCCEEEEECCSCTTS
T ss_pred HHHHHHHHHHcCCCeEEEeCCCCcHHhccCCCccCCCCccccCChHHHHHHHHHHHHHHHHHHHcCCceeEeeeecCCcc
Confidence 3457888888887545545556678854322111 10 0001123678899999999999854 347889999999
Q ss_pred CCC---C-----CChhHHHHHHHHHHHHHHhcCCCcEEEEe-CCCCCC-----c-----chhhhh--cccCcCC-C--CC
Q 008330 217 RGP---K-----QNVKDWYRYMQLGAEAVHAANPEVLVILS-GLNFDK-----D-----LSFVRN--QAVNLTF-T--GK 272 (570)
Q Consensus 217 ~~~---~-----~~~~~W~~~~~~~~~aIr~~dp~~lIiVe-G~~w~~-----d-----l~~~~~--~p~~l~~-~--~n 272 (570)
... . -+.++-.++++.+..++++.+++.-|++. ...|.. + ...+.. .|-.... + .+
T Consensus 190 ~~~~~~~~es~~~t~~~~a~fik~L~p~l~~~g~~~kI~~~d~~~~~~~~d~~n~~~~~~~~~~~~~d~~a~~yv~g~~~ 269 (507)
T 3clw_A 190 QWHANSFQEGSFATKADLYRMVEELDKAISEAQIDTKILIPEVGDMKYLFEIDSIAKTPDDIIHSMFYKDGQYSVLKFKN 269 (507)
T ss_dssp CGGGCCSSCCCCCCHHHHHHHHHHHHHHHHHHTCSCEEEEEEESSGGGGSCCCSCTTCCCCHHHHHHSTTSTTCCTTCTT
T ss_pred ccccCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEEeccccccccccccccccchhhHHHhhcCcchHhhhhcccc
Confidence 321 1 13445566677788899999887655554 333321 0 001110 1111111 1 11
Q ss_pred --EEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHh--cCCCeEEeccccCCCC-----C-Cc-----chHHH
Q 008330 273 --LVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLE--QGWPLFVSEFGADLRG-----N-NV-----NDNRY 337 (570)
Q Consensus 273 --lVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~--~g~Pv~iGEFG~~~~~-----~-~~-----~~~~~ 337 (570)
-|+.+|+|..... ...+...-......+.+ .+++++++|.+..... . .. ....+
T Consensus 270 ~~diia~H~Y~~~~~-----------~~~l~~~r~~~~~~a~~~~~~k~lw~TE~~~~g~~~~~~~~~~~~~~~~~a~~~ 338 (507)
T 3clw_A 270 LFNCVAAHDYWSAYP-----------ATLLVDIRNRIHKELSANGHNTKFWASEYCILEKNEEITMPASPERSINLGLYV 338 (507)
T ss_dssp EEEEEEECCTTCSSS-----------HHHHHHHHHHHHHHHHTTSSCCEEEECCCCSCCCCTTTCSSSCHHHHHHHHHHH
T ss_pred ccceEEEeeCCCCCC-----------cchhhhHHHHHHHHHhhccCCCceEEeeeccCCCCcccccCCCCcccHHHHHHH
Confidence 2489999974210 11121110111112233 5899999999872210 0 10 01234
Q ss_pred HHHHHHHHHHCCC-ceEEeccC
Q 008330 338 LNCFFGVAAELDW-DWALWTLV 358 (570)
Q Consensus 338 ~~~~~~~~~~~gi-gw~~W~~~ 358 (570)
.+.++..+...+. +|.+|.+-
T Consensus 339 a~~i~~~l~~~~~~a~~~Wn~~ 360 (507)
T 3clw_A 339 ARIIHNDLTLANASAWQWWTAV 360 (507)
T ss_dssp HHHHHHHHHTSCCSEEEEEESE
T ss_pred HHHHHHHHHhCCCcEEEEchhh
Confidence 5555566666555 79999863
|
| >4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=6.7e-05 Score=82.56 Aligned_cols=110 Identities=12% Similarity=0.011 Sum_probs=81.2
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|++||+|+-|+.++|.-+.++ ... ..-.++..++.++++|+++.++||.
T Consensus 78 y~EDi~Lm~elG~~~yRfSIsWsRI~P~----G~~--------------------~g~~N~~Gl~fY~~lid~l~~~GIe 133 (540)
T 4a3y_A 78 YKEDVNILKNLGLDAYRFSISWSRVLPG----GRL--------------------SGGVNKEGINYYNNLIDGLLANGIK 133 (540)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSTT----SSG--------------------GGCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHcCCCEEEeeccHhhcccC----CCC--------------------CCCCCHHHHHHHHHHHHHHHHcCCc
Confidence 5899999999999999999999766542 100 0123567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.||.+||.. |.|.... -.||-+ + ...+.|.++-+.+.++|++.-. -+=.+|||.
T Consensus 134 P~VTL~H~dlP~~L~~~--yGGW~n-r-~~v~~F~~Ya~~~f~~fgdrVk--~W~T~NEP~ 188 (540)
T 4a3y_A 134 PFVTLFHWDVPQALEDE--YGGFLS-P-RIVDDFCEYAELCFWEFGDRVK--HWMTLNEPW 188 (540)
T ss_dssp EEEEEESSCCBHHHHHH--HCGGGS-T-HHHHHHHHHHHHHHHHHTTTCC--EEEEEECHH
T ss_pred cceeccCCCCcHHHHhc--cCCcCC-h-HHHHHHHHHHHHHHHHhccccC--EeeEccccH
Confidence 999998754 4332110 024433 2 2478899999999999999733 356789984
|
| >3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0027 Score=69.00 Aligned_cols=189 Identities=11% Similarity=0.083 Sum_probs=106.3
Q ss_pred HHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCC--
Q 008330 142 KAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP-- 219 (570)
Q Consensus 142 ~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~-- 219 (570)
..+|++++.|.+-|..+|+.+-.-. -++++..+..+.+...-+. .+|..+||-|||...
T Consensus 119 ~~~def~~f~~~~G~~~~~~lN~g~------------------~~~~~a~~~v~y~~~~~~~-~~l~~welGNEpd~~~~ 179 (488)
T 3vny_A 119 EAVNNLSEFLDKTGWKLIYGLNLGK------------------GTPENAADEAAYVMETIGA-DRLLAFQLGNEPDLFYR 179 (488)
T ss_dssp HHHHHHHHHHHHHCCEEEEEECTTT------------------SCHHHHHHHHHHHHHHHCT-TTEEEEEESSCGGGHHH
T ss_pred HHHHHHHHHHHHhCCEEEEEEeCCC------------------CCHHHHHHHHHHHhhcccC-CceeEEEecCccccccc
Confidence 3489999999999999998765321 1244444444444432222 378999999999632
Q ss_pred ------CCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcc--hhhhhcccCcCCCCCEEEEEeecCCCCC-CCCCC
Q 008330 220 ------KQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDL--SFVRNQAVNLTFTGKLVFEAHWYGFTDG-QAWVD 290 (570)
Q Consensus 220 ------~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl--~~~~~~p~~l~~~~nlVys~H~Y~~~~~-~~w~~ 290 (570)
.-+.+++.+.+++.+++||+++|+..++-.+..++.+. .++..... .=-.++.|+|..... .+...
T Consensus 180 ~G~~~~~~t~~~Y~~~~~~~a~a~k~~~p~~~l~gp~~~~~~~w~~~~l~~~~~-----~vd~vS~H~Y~~g~~~~~~~t 254 (488)
T 3vny_A 180 NGIRPASYDFAAYAGDWQRFFTAIRKRVPNAPFAGPDTAYNTKWLVPFADKFKH-----DVKFISSHYYAEGPPTDPSMT 254 (488)
T ss_dssp HSSSCTTCCHHHHHHHHHHHHHHHHHHCTTCCEEEEEESSCGGGHHHHHHHTGG-----GCSEEEEEEEEECCTTCTTCC
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEeCCCCCCchhhHHHHHhcCc-----cCCEEEEeeCCCCCCCCCCcC
Confidence 11456666777788899999999876555443332211 11221111 122689999974211 00000
Q ss_pred CCCcc--hhh-HHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCc------chHHHHHHHHHHHHHCCCceE-Eec
Q 008330 291 GNPNQ--VCG-RVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNV------NDNRYLNCFFGVAAELDWDWA-LWT 356 (570)
Q Consensus 291 ~~~~~--~~~-~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~------~~~~~~~~~~~~~~~~gigw~-~W~ 356 (570)
... ... .+.+.++.....+...+.|+++||++....++.+ ...-|.-+++-++.+.++.-+ ++.
T Consensus 255 --~~~ll~~~~~l~~~~~~~~~~~~~~g~p~~lgEtnsa~~~G~~~vs~tf~aalw~~D~~~~~a~~g~~~v~~h~ 328 (488)
T 3vny_A 255 --IERLMKPNPRLLGETAGLKQVEADTGLPFRLTETNSCYQGGKQGVSDTFAAALWAGDLMYQQAAAGSTGINFHG 328 (488)
T ss_dssp --HHHHTSCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEESTTCCTTTTTSTHHHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred --HHHHcCchHHHHHHHHHHHHHHhcCCCCEEEeccccCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCcEEEEEc
Confidence 000 001 1222222211222347899999999987654321 134666667777777887633 443
|
| >2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=97.56 E-value=0.0003 Score=72.05 Aligned_cols=120 Identities=18% Similarity=0.116 Sum_probs=77.2
Q ss_pred EeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCC
Q 008330 58 CVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVD 137 (570)
Q Consensus 58 GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~ 137 (570)
||||..... .-.+.+++++.+++.|++.||| ++. +
T Consensus 2 Gv~Yg~~~~-------~~ps~~~vv~llk~~~i~~vRl-Y~~-------------------------------------d 36 (312)
T 2cyg_A 2 GVCYGMLGN-------NLPPPSEVVSLYKSNNIARMRL-YDP-------------------------------------N 36 (312)
T ss_dssp EEECCCCCS-------SCCCHHHHHHHHHHTTCCEEEE-SSC-------------------------------------C
T ss_pred eEEccCCCC-------CCCCHHHHHHHHHhcCCCEEEE-cCC-------------------------------------C
Confidence 888854321 2245678899999999999999 211 0
Q ss_pred chHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHH-HHHHHHhCCCCcEEEEeccCCC
Q 008330 138 LPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGL-TKMATIFNGVRNVVGMSLRNEL 216 (570)
Q Consensus 138 ~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w-~~iA~ryk~~p~Vig~dL~NEP 216 (570)
..++++++..||+|+|.+....- .. .. .+++. ...| +.-...|-....|.++-+-||+
T Consensus 37 -------~~vl~A~~~tgi~v~lgv~n~~~----~~------~a---~~~~~-a~~Wv~~nv~~y~~~~~i~~I~VGNEv 95 (312)
T 2cyg_A 37 -------QAALQALRNSNIQVLLDVPRSDV----QS------LA---SNPSA-AGDWIRRNVVAYWPSVSFRYIAVGNEL 95 (312)
T ss_dssp -------HHHHHHHTTSCCEEEEEECHHHH----HH------HH---HCTTH-HHHHHHHHTGGGTTTSEEEEEEEEESC
T ss_pred -------HHHHHHHHhcCCEEEEeccccch----hh------hh---hCHHH-HHHHHHHHHHhhCCCceEEEEEecccc
Confidence 25778888999999998653110 00 00 00111 2223 3344456556788899999999
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhcCCC
Q 008330 217 RGPKQNVKDWYRYMQLGAEAVHAANPE 243 (570)
Q Consensus 217 ~~~~~~~~~W~~~~~~~~~aIr~~dp~ 243 (570)
-...........+|+.+-+++++.+-.
T Consensus 96 l~~~~~~~~L~~am~~v~~aL~~~gl~ 122 (312)
T 2cyg_A 96 IPGSDLAQYILPAMRNIYNALSSAGLQ 122 (312)
T ss_dssp TTTSTTGGGHHHHHHHHHHHHHHTTCT
T ss_pred ccCCCCHHHHHHHHHHHHHHHHhCCCC
Confidence 653335667888999888889887653
|
| >2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0012 Score=69.60 Aligned_cols=182 Identities=14% Similarity=0.185 Sum_probs=97.7
Q ss_pred HHHHHHhcCCCEEEEecCCCCCCccccCCC--CCCCCCCCCCCHHHHHHHHHHHHHHhCCC-CcEEEEeccCCCCCCCC-
Q 008330 146 AVVASLGNNNVMVILDNHISKPGWCCSNSD--GNGFFGDQYFNPDLWIKGLTKMATIFNGV-RNVVGMSLRNELRGPKQ- 221 (570)
Q Consensus 146 ~vV~~a~~~Gl~VILD~H~~~~~w~~~~~d--gng~~~d~~~~~~~~~~~w~~iA~ryk~~-p~Vig~dL~NEP~~~~~- 221 (570)
.+++.|.++|++|+..-. .+|.|-..+.. +.+..... ..+.|.+++.+.++.|+++ =.|-++.+.|||.....
T Consensus 66 ~~~k~A~~~~~~i~aspW-SpP~wMk~n~~~~~~g~L~~~--~~~~yA~Yl~k~i~~y~~~Gi~i~~is~qNEP~~~~~~ 142 (383)
T 2y24_A 66 PSARQAVSLGAKIMATPW-SPPAYMKSNNSLINGGRLLPA--NYSAYTSHLLDFSKYMQTNGAPLYAISIQNEPDWKPDY 142 (383)
T ss_dssp HHHHHHHHTTCEEEEEES-CCCGGGBTTSSSBSCCBBCGG--GHHHHHHHHHHHHHHHHHTTCCCSEEESCSCTTCCCSS
T ss_pred HHHHHHHhcCCeEEEecC-CCcHHHhCCCCCCCCCcCCHH--HHHHHHHHHHHHHHHHHHcCCCeEEecccccCCCCCCC
Confidence 456778889998887654 45678543221 11211111 2578888999999999864 23668999999975321
Q ss_pred -----ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcch-hhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcc
Q 008330 222 -----NVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLS-FVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQ 295 (570)
Q Consensus 222 -----~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~-~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~ 295 (570)
+.++-.++++....+ .....+++-+...|+.+.. .+...|-.. ..--.+.+|+|+.... .
T Consensus 143 ~~~~~t~~~~~~fik~~~~~---~~~~kI~~~d~~~~d~~~~~~~l~d~~a~--~~v~~i~~H~Y~~~~~--------~- 208 (383)
T 2y24_A 143 ESCEWSGDEFKSYLKSQGSK---FGSLKVIVAESLGFNPALTDPVLKDSDAS--KYVSIIGGHLYGTTPK--------P- 208 (383)
T ss_dssp BCCBCCHHHHHHHHHHHGGG---STTSEEEEEEETTCCGGGTHHHHTCHHHH--TTCCEEEEECTTSCCC--------C-
T ss_pred CccCcCHHHHHHHHHHhhhh---hcCCEEEeecccccchhcchhhccCHhHH--hhccEEEEecCCCCcc--------c-
Confidence 122222333222111 1112333334445655432 111111100 1124679999974321 0
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCeEEeccccCCC--CCCcc-hHHHHHHHHHHHHHCCC-ceEEecc
Q 008330 296 VCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLR--GNNVN-DNRYLNCFFGVAAELDW-DWALWTL 357 (570)
Q Consensus 296 ~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~--~~~~~-~~~~~~~~~~~~~~~gi-gw~~W~~ 357 (570)
.. .+...+.+++++|.+.... .+... ...+.+.++..+.. ++ +|.+|.+
T Consensus 209 ~~------------~~~~~~k~lw~TE~~~~~~~~~~~w~~~~~~a~~i~~~l~~-~~~~~~~W~~ 261 (383)
T 2y24_A 209 YP------------LAQNAGKQLWMTEHYVDSKQSANNWTSAIEVGTELNASMVS-NYSAYVWWYI 261 (383)
T ss_dssp CH------------HHHHTTCEEEEEEECSCTTSCTTCHHHHHHHHHHHHHHHHT-TCSEEEEEES
T ss_pred ch------------hhhcCCCeEEEeccccCCCcccCchhHHHHHHHHHHHHHhc-CccEEEEeec
Confidence 00 0122679999999986432 12221 23556667777766 54 6999986
|
| >1ybi_A HA33A, HA33/A, non-toxin haemagglutinin HA34; beta-trefoil; 1.50A {Clostridium botulinum} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00024 Score=72.03 Aligned_cols=105 Identities=13% Similarity=0.044 Sum_probs=69.3
Q ss_pred ceeeCCC-CceeeeecCC-CCceecCCCCCC--CCccccCC---cceee---cccceEEeecc-CCccceeccccC---C
Q 008330 412 KVIYHPA-TGLCVQRKSF-LDPLTLGPCTES--EAWSYTPH---KTISL---KGAYFCLQAKH-VGKPAKLGIICT---D 477 (570)
Q Consensus 412 ~~~~~~~-tg~c~~~~~~-~~~~~~~~c~~~--~~W~~~~~---~~~~~---~~~~~cl~a~~-~g~~~~~~~~c~---~ 477 (570)
+.|.... ++.|+++.+. .+.+++++|+++ ++|+++.+ +..++ ..+++||+..+ .|.++.+ ++|. .
T Consensus 150 y~I~~~~s~~~vldv~~~~g~~v~~w~~~g~~nQ~W~~~~~~~~~~Y~i~~~~~s~~~L~~~~~~G~~v~~-~~~~~~~~ 228 (288)
T 1ybi_A 150 CKISPILDLNKVVQQVDVTNLNVNLYTWDYGRNQKWTIRYNEEKAAYQFFNTILSNGVLTWIFSNGNTVRV-SSSNDQNN 228 (288)
T ss_dssp EEEEETTCTTEEEEESSSSCCBEEEEECCCCGGGCEEEEEETTTTEEEEEETTSSSEEEEECGGGTTBEEE-EECCCSCC
T ss_pred EEEEEccCCCeEEEeeCCCCCEEEEecCCCCccCEEEEEEccCCCeEEEEeccCCceEEEecCCCCCEEEE-EecCCCCC
Confidence 4455554 4699999542 356999999886 79999743 22332 35789999866 4766655 6665 3
Q ss_pred CCCceeEeec--cccEEEEecCCCceEEEeecC----CC-ceeecce
Q 008330 478 CGSTWEIISD--SKMHLSSKADNGTTVCLDVDS----SN-TIVTNTC 517 (570)
Q Consensus 478 ~~~~W~~~s~--~~~~~~~~~~~~~~~cld~~~----~~-~~~~~~c 517 (570)
.+|+|++... +..+...+....+++||||.+ || .|+.+.|
T Consensus 229 ~~Q~W~~~~~~~~~G~y~i~n~~~sg~~LDv~~~stanGt~v~~w~~ 275 (288)
T 1ybi_A 229 DAQYWLINPVSDTDETYTITNLRDTTKALDLYGGQTANGTAIQVFNY 275 (288)
T ss_dssp GGGCEEEEECTTCSSEEEEEETTEEEEEEEEGGGCCSTTCBEEEEEC
T ss_pred hhcEEEeeeecCCCCEEEEEECCCCCeEEEECCCCCCCCCEEEEEcC
Confidence 5899999843 443333332246789999972 66 6666765
|
| >3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.001 Score=66.60 Aligned_cols=160 Identities=16% Similarity=0.271 Sum_probs=96.7
Q ss_pred CCCCCChHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCc-ccCCCCCCCchHHHHHHHHH
Q 008330 71 EGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGI-QSNNPSIVDLPLIKAFQAVV 148 (570)
Q Consensus 71 ~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~-~~~nP~~~~~t~l~~ld~vV 148 (570)
.|--..+++..++...+.|+|+||| +++.=++.+. +.+=.+ ... -|. .-.-|.-.....-..|.+++
T Consensus 32 PGepf~DLD~afdEavERGYNTVRIcAmP~LLf~~p--------~~l~~l--~pl-~gQrrW~~pg~~evdgr~~L~elf 100 (393)
T 3gyc_A 32 PGAGYEDWDQVLDELSERGYNAIRIDAYPHLIAENP--------MKKWLL--KEV-WNQQDWGSPDMNEVQVQPNLNLFL 100 (393)
T ss_dssp TTSSCSCHHHHHHHHHHTTCCEEEEECCHHHHHHCT--------TCCEEE--CCS-CSSSSSSCSSCEEECCTTHHHHHH
T ss_pred CCCChhHHHHHHHHHHHcCCCeEEeccccceeecCC--------cchhhc--ccc-ccccccCCCCCceechHHHHHHHH
Confidence 3444567999999999999999999 4443333220 000000 000 000 00122222223446788999
Q ss_pred HHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--C-CCcEEEEeccCCCCCCC-----
Q 008330 149 ASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFN--G-VRNVVGMSLRNELRGPK----- 220 (570)
Q Consensus 149 ~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk--~-~p~Vig~dL~NEP~~~~----- 220 (570)
+.|.+||++|||.- |.....+.. .-. ...++...+.|..+..-.. + ..+|+..||.||-.+..
T Consensus 101 ~aAk~hd~~ViLSS------WYQQspsea-l~a--~~R~e~lA~aw~~lLdfi~~~GL~drIAyVELhNEv~~~~la~~~ 171 (393)
T 3gyc_A 101 SKCKERDIKVGLSS------WYRLDVDEV-CLK--LDTPEKLADCWLTILRSIEEDGLLDTILYVDLCNEWPGDSWAPFF 171 (393)
T ss_dssp HHHHHTTCEEEEEC------CCCCBTTCG-GGG--CCSHHHHHHHHHHHHHHHHHTTCGGGEEEEESSTTTTCTTTCHHH
T ss_pred HHHHHcCCEEEEeh------hhhcCHHHH-Hhh--hccHHHHHHHHHHHHHHHHHccchhceeeEeeeccccCccccccc
Confidence 99999999999973 321111110 000 1235666666666655443 2 35799999999965432
Q ss_pred --C---------ChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 221 --Q---------NVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 221 --~---------~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
+ ..+....+++++++++|+.=|+.+|.++=
T Consensus 172 ~~~~~~vg~~a~~~e~l~~~lee~v~~lR~~hP~lpvt~Sy 212 (393)
T 3gyc_A 172 AKTYPNVGWGNWYKEESLRWMKTSLEKMRQVYPDMPFLYSF 212 (393)
T ss_dssp HTTCTTTCTTCTTSHHHHHHHHHHHHHHHTTCTTSCEECCB
T ss_pred CccccccccchhhhHhhhHHHHHHHHHHHHhCCCCeeeeee
Confidence 1 12366789999999999999999998864
|
| >1knl_A Endo-1,4-beta-xylanase A; carbohydrate binding module, CBM13 xylan binding domain, LEC ricin B-like, beta-trefoil fold, hydrolase; 1.20A {Streptomyces lividans} SCOP: b.42.2.1 PDB: 1knm_A* 1mc9_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=8.3e-05 Score=65.52 Aligned_cols=68 Identities=15% Similarity=0.323 Sum_probs=54.2
Q ss_pred CCCceeeeecCC--CCceecCCCCCC--CCccccCCcceeecccceEEeeccC----CccceeccccC-CCCCceeEe
Q 008330 417 PATGLCVQRKSF--LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKHV----GKPAKLGIICT-DCGSTWEII 485 (570)
Q Consensus 417 ~~tg~c~~~~~~--~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~~----g~~~~~~~~c~-~~~~~W~~~ 485 (570)
..+|+|+++.+. ..++.+++|.++ ++|.++.++.|+-+.+++||++.+. |.++.+ +.|. +++|+|+++
T Consensus 54 ~~s~~CLd~~~~~~g~~v~~~~c~~~~~Q~W~~~~~g~i~~~~sg~cLdv~~~~~~~g~~v~~-~~c~~~~~Q~W~~~ 130 (130)
T 1knl_A 54 VYGDKCLDAAGTSNGSKVQIYSCWGGDNQKWRLNSDGSVVGVQSGLCLDAVGNGTANGTLIQL-YTCSNGSNQRWTRT 130 (130)
T ss_dssp ETTTEEEEESCSSTTCBEEEEECCCCGGGCEEECTTSCEEETTTCCEEEEGGGCCSTTCBEEE-ECCCCCGGGCEECC
T ss_pred ECCCcEEeCCCCCCCCEEEEEecCCCCcceEEECCCCeEEECCCCceEECCCCCCCCCCEEEE-EeCCCCccceEEEC
Confidence 468999999432 356999999985 7999998888877789999999863 666665 8998 778999873
|
| >4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0021 Score=70.24 Aligned_cols=127 Identities=13% Similarity=0.051 Sum_probs=72.2
Q ss_pred HHHHHHHhCC-CCcEEEEeccCCCCCCC-----C-----ChhHHHHHHHHHHHHHHhcC---CCcEEEEeCCCCCC----
Q 008330 194 LTKMATIFNG-VRNVVGMSLRNELRGPK-----Q-----NVKDWYRYMQLGAEAVHAAN---PEVLVILSGLNFDK---- 255 (570)
Q Consensus 194 w~~iA~ryk~-~p~Vig~dL~NEP~~~~-----~-----~~~~W~~~~~~~~~aIr~~d---p~~lIiVeG~~w~~---- 255 (570)
-+.+|++|+. .+..--||++|||.-.. . .++...++...++++||+.. |+..|.=....|..
T Consensus 124 a~~~a~~~~~~e~~p~y~Ev~NEP~v~~~~~~~~~~~~~~~~~~~e~~~~vA~aIk~~~~~np~vkVGGpasA~p~~e~~ 203 (591)
T 4aw7_A 124 GAWSAEYYSNSELVPEFFEPLNEPFVHANDAGFTVQGQAMRELMVDFYASIGKHIHNNPRLNGKMKVIGYAAAYPAWEDG 203 (591)
T ss_dssp HHHHHHHHHTCSEEEEEEECSSSCGGGTTCTTCSSCHHHHHHHHHHHHHHHHHHHHTCTTTTTTCEEEEEEESCCCTTTT
T ss_pred HHHHHHHhccCCCCceeEEeccCCCcccccccccCCCchhHHHHHHHHHHHHHHHhccccCCCceeEecccccccccccc
Confidence 3456777764 34455699999998331 1 13345566788999999875 88776655445531
Q ss_pred cch--------hhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHH--HHHH-HhcCCCeEEeccc
Q 008330 256 DLS--------FVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRL--SGFL-LEQGWPLFVSEFG 324 (570)
Q Consensus 256 dl~--------~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~--~g~l-~~~g~Pv~iGEFG 324 (570)
++. ++...... =-.||+|.|... |.+......-.++++.++-. ..++ ...-.|++|+|+|
T Consensus 204 nF~~W~~~~k~Fmd~ag~~-----mDf~S~H~Yd~~----~~~~~~~rsGsn~EA~LDmie~Ys~~k~G~vKP~~ISEYG 274 (591)
T 4aw7_A 204 NFNYWNTRMKMFIDRAGAY-----MDGFSVHLYDGI----VTGTDTKRSGSNSEAVLDMVEAYSYIKFGHVKPLAISEFG 274 (591)
T ss_dssp TTHHHHHTHHHHHHHHGGG-----CSEEEEEEEEEC---------CCCTTHHHHHHHHHHHHHHHHHHSSCCCEEEEEEE
T ss_pred chhhhhHHHHHHHHhcCCC-----cCEEEEeecCCc----ccCCCccccCccHhHHHHHHHHHHHHHhCCCcceEEeccC
Confidence 222 22221112 236899999864 22222222334555555432 2322 2267999999999
Q ss_pred cCCCC
Q 008330 325 ADLRG 329 (570)
Q Consensus 325 ~~~~~ 329 (570)
....+
T Consensus 275 ~~~~~ 279 (591)
T 4aw7_A 275 GIDNS 279 (591)
T ss_dssp EECC-
T ss_pred CccCC
Confidence 87654
|
| >3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0001 Score=67.99 Aligned_cols=74 Identities=7% Similarity=0.115 Sum_probs=58.3
Q ss_pred cceeeCCCCceeeeecCC----CCceecCCCCCC--CCccccCCc----ceeecccceEEeeccC----CccceeccccC
Q 008330 411 HKVIYHPATGLCVQRKSF----LDPLTLGPCTES--EAWSYTPHK----TISLKGAYFCLQAKHV----GKPAKLGIICT 476 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~----~~~~~~~~c~~~--~~W~~~~~~----~~~~~~~~~cl~a~~~----g~~~~~~~~c~ 476 (570)
++.+....+|+|+++.+. ..++.+++|.++ ++|.+++.+ .|+-+.+++||+..+. |.++.+ +.|.
T Consensus 75 ~y~i~~~~sg~cLdv~~~~~~~G~~v~~~~c~~~~~Q~W~~~~~g~g~~~i~~~~sg~cLdv~~~~~~~G~~v~~-~~c~ 153 (165)
T 3pg0_A 75 YYKLVARHSGKALDVENASTSDGANVIQYSYSGGDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVIQ-YSYS 153 (165)
T ss_dssp EEEEEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEEEEECSSSCEEEEETTTCCEEEEGGGCCSTTCBEEE-ECCC
T ss_pred EEEEEECCCCCEEEeCCCCCCCCCEEEEEcCCCCCccEEEEEECCCCEEEEEECCCCcEEEcCCCCCCCCCEEEE-eCCC
Confidence 467788889999998432 356999999975 799998766 6776789999999874 455555 8898
Q ss_pred -CCCCceeEe
Q 008330 477 -DCGSTWEII 485 (570)
Q Consensus 477 -~~~~~W~~~ 485 (570)
+++|+|++.
T Consensus 154 g~~nQ~W~~~ 163 (165)
T 3pg0_A 154 GGDNQQWRLV 163 (165)
T ss_dssp CCGGGCEEEE
T ss_pred CCccceEEEE
Confidence 778999984
|
| >2dry_A 29-kDa galactose-binding lectin; earthworm lumbricus terrestris, sialic acid, in vitro evolution, beta-trefoil fold, sugar binding protein; HET: PGE; 1.80A {Lumbricus terrestris} PDB: 2drz_A* 2ds0_A* 2zqn_A* 2zqo_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=7.3e-05 Score=66.67 Aligned_cols=71 Identities=13% Similarity=0.011 Sum_probs=55.9
Q ss_pred eeeCCCCceeeeecCCCCceecCCCCCC--CCccccCCccee-ecccceEEeeccC----CccceeccccC-CCCCceeE
Q 008330 413 VIYHPATGLCVQRKSFLDPLTLGPCTES--EAWSYTPHKTIS-LKGAYFCLQAKHV----GKPAKLGIICT-DCGSTWEI 484 (570)
Q Consensus 413 ~~~~~~tg~c~~~~~~~~~~~~~~c~~~--~~W~~~~~~~~~-~~~~~~cl~a~~~----g~~~~~~~~c~-~~~~~W~~ 484 (570)
.+....+|+|+++.+. .+.+++|+++ ++|.+.+++.+. .+.+++||++.|. |.++.+ ++|. +++|+|.+
T Consensus 51 ~i~~~~sg~cLD~~G~--~v~~~~c~g~~~Qqw~~~~~g~~~~~~~sg~cLDv~g~st~~G~~v~~-w~~~g~~nQ~W~~ 127 (130)
T 2dry_A 51 VIRSKLNDFAIDASHE--QIETQPFDPNNPKRAWIVSGNTIAQLSDRDNVLGVIKSDKGASAHICA-WKQHGGPNQKFII 127 (130)
T ss_dssp CEEETTTCCEEECSSS--SCEEECCCTTCGGGCEEEETTEEEETTEEEEEEEEECCSSSSCCEEEE-EECCCSGGGCEEE
T ss_pred eEEEccCCeeEEecCC--ceEEEecCCCcceeEEEeCCCcEEEecccCceEEccCCCCCCCCEEEE-ECCCCCccceEEE
Confidence 4566778999999653 4899999987 699998888553 4678999999875 555555 8999 78999998
Q ss_pred ee
Q 008330 485 IS 486 (570)
Q Consensus 485 ~s 486 (570)
-|
T Consensus 128 es 129 (130)
T 2dry_A 128 ES 129 (130)
T ss_dssp EE
T ss_pred Ee
Confidence 65
|
| >2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0058 Score=67.56 Aligned_cols=94 Identities=11% Similarity=0.070 Sum_probs=64.7
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHH--------HHHHHHHHhCC-CC-cEEEEecc
Q 008330 144 FQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIK--------GLTKMATIFNG-VR-NVVGMSLR 213 (570)
Q Consensus 144 ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~--------~w~~iA~ryk~-~p-~Vig~dL~ 213 (570)
+|+++++|.+.|+..++-+-...+ ...+...|++ -|..+-.++.- +| +|--+||-
T Consensus 149 ~dEf~~~~~~~GaeP~i~vn~G~~---------------~~~ea~dwveY~n~~~~t~w~~lR~~~G~~ep~~vkyweIG 213 (574)
T 2y2w_A 149 IDDFYRWSQKAGTEIMLAVNMGTR---------------GLKAALDELEYVNGAPGTAWADQRVANGIEEPMDIKMWCIG 213 (574)
T ss_dssp HHHHHHHHHHHTCEEEEEECCSSC---------------CHHHHHHHHHHHHCCTTSHHHHHHHHTTCCSCCCCCEEEES
T ss_pred HHHHHHHHHHcCCEEEEEEeCCCC---------------CHHHHHHHHHHhCCCCCChHHHHHHHcCCCCCcceeEEEec
Confidence 799999999999999887643210 0011223332 24444455542 33 57789999
Q ss_pred CCCCCCCC----ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCC
Q 008330 214 NELRGPKQ----NVKDWYRYMQLGAEAVHAANPEVLVILSGLN 252 (570)
Q Consensus 214 NEP~~~~~----~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~ 252 (570)
||+.+.++ +.+++.+.+.+.++|||+++|+..|+..|..
T Consensus 214 NE~~g~W~~G~~t~e~Y~~~~~~~a~AiK~vdP~i~via~G~~ 256 (574)
T 2y2w_A 214 NEMDGPWQVGHMSPEEYAGAVDKVAHAMKLAESGLELVACGSS 256 (574)
T ss_dssp SCTTSTTSTTCCCHHHHHHHHHHHHHHHHHHCTTCEEEEECCS
T ss_pred cccccccccCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEecCC
Confidence 99987642 4667888889999999999999887776654
|
| >3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0014 Score=68.00 Aligned_cols=198 Identities=16% Similarity=0.211 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHhcCCCEEE---EecCCCCCCccccCCCCCCCCCCCCCCH----HHHHHHHHHHHHHhCCCCcEEEEecc
Q 008330 141 IKAFQAVVASLGNNNVMVI---LDNHISKPGWCCSNSDGNGFFGDQYFNP----DLWIKGLTKMATIFNGVRNVVGMSLR 213 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VI---LD~H~~~~~w~~~~~dgng~~~d~~~~~----~~~~~~w~~iA~ryk~~p~Vig~dL~ 213 (570)
+...|++|++|.++||.|- |=.|.-.|.|.....++++-+ ...++ +.+.+..+.|++||++. |..+|+.
T Consensus 61 f~~aD~~v~~a~~ngi~vrGHtLvWh~q~P~W~~~~~d~~g~~--~~~s~~~l~~~~~~hI~~vv~rYkg~--i~~WDVv 136 (341)
T 3ro8_A 61 FTAADAMIDKVLAEGMKMHGHVLVWHQQSPAWLNTKKDDNNNT--VPLGRDEALDNLRTHIQTVMKHFGNK--VISWDVV 136 (341)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSSSCCGGGTEEECTTSCE--EECCHHHHHHHHHHHHHHHHHHHGGG--SSEEEEE
T ss_pred hHHHHHHHHHHHhCCCEEEeccccCcccCCHHHhccCcccccc--CCCCHHHHHHHHHHHHHHHHHHcCCc--ceEEEEe
Confidence 4678999999999999995 667887788865422222100 01233 45667888999999985 7789999
Q ss_pred CCCCCCCC----------ChhHHHH-----HHHHHHHHHHhc-----CCCcEEEEeCCCCCCc---------chhhhhc-
Q 008330 214 NELRGPKQ----------NVKDWYR-----YMQLGAEAVHAA-----NPEVLVILSGLNFDKD---------LSFVRNQ- 263 (570)
Q Consensus 214 NEP~~~~~----------~~~~W~~-----~~~~~~~aIr~~-----dp~~lIiVeG~~w~~d---------l~~~~~~- 263 (570)
|||..... ....|++ |+..+.++-|++ +|+...++-..+-... +..+...
T Consensus 137 NE~~~~~~~~p~~~~~~~r~s~w~~~lG~d~i~~AF~~Ar~a~~~~pdp~akL~~NDYn~~~~~k~~~~~~lv~~l~~~~ 216 (341)
T 3ro8_A 137 NEAMNDNPSNPADYKASLRQTPWYQAIGSDYVEQAFLAAREVLDENPSWNIKLYYNDYNEDNQNKATAIYNMVKDINDRY 216 (341)
T ss_dssp ECCBCSSCSCTTCTGGGBCCCHHHHHHCTTHHHHHHHHHHHHHHHSTTCCCEEEEEESCTTSHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCccccccccccCChHHHhcCHHHHHHHHHHHHHhcccCCCCCcEEEEecCCCcccchHHHHHHHHHHHHHhh
Confidence 99964310 1134654 567777778887 6688888865332110 0111110
Q ss_pred ----ccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCc-------
Q 008330 264 ----AVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNV------- 332 (570)
Q Consensus 264 ----p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~------- 332 (570)
+-..+. +-+=+-.|+-... .++.+.+.+++ +.+.|+||.|+|+=+.......
T Consensus 217 a~~~~~g~~I-dGIG~Q~H~~~~~------------~~~~~~~~l~~----~a~lGl~v~iTElDi~~~~~~~~~~~~~~ 279 (341)
T 3ro8_A 217 AAAHNGKLLI-DGVGMQGHYNINT------------NPDNVKLSLEK----FISLGVEVSVSELDVTAGNNYTLPENLAV 279 (341)
T ss_dssp HHHTTTCCSC-CEEEECCEEETTC------------CHHHHHHHHHH----HHTTTCEEEEEEEEEECCSSCCCHHHHHH
T ss_pred hcccCCCCcc-ceeeechhccCCC------------CHHHHHHHHHH----HHHcCCceEEEeeeccCCCCCCCCHHHHH
Confidence 001122 3455566653211 12345555543 3458999999999886532211
Q ss_pred chHHHHHHHHHHHHHC--CC-ceEEeccCc
Q 008330 333 NDNRYLNCFFGVAAEL--DW-DWALWTLVG 359 (570)
Q Consensus 333 ~~~~~~~~~~~~~~~~--gi-gw~~W~~~G 359 (570)
.....++.++..+.++ .+ +-++|.+..
T Consensus 280 ~qa~~y~~~~~~~~~~~~~v~giT~WG~~D 309 (341)
T 3ro8_A 280 GQAYLYAQLFKLYKEHADHIARVTFWGMDD 309 (341)
T ss_dssp HHHHHHHHHHHHHHHTGGGEEEEEEC----
T ss_pred HHHHHHHHHHHHHHhccCCceEEEEeCCCC
Confidence 1234556677777765 23 677888753
|
| >1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00048 Score=70.26 Aligned_cols=118 Identities=15% Similarity=0.086 Sum_probs=76.0
Q ss_pred EeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCC
Q 008330 58 CVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVD 137 (570)
Q Consensus 58 GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~ 137 (570)
||||.-.. -.-.+.+++++.|++.|++.||| ++. +
T Consensus 2 Gv~yg~~~-------~nlps~~~vv~llk~~~i~~vRl-Y~~-------------------------------------d 36 (306)
T 1ghs_A 2 GVCYGVIG-------NNLPSRSDVVQLYRSKGINGMRI-YFA-------------------------------------D 36 (306)
T ss_dssp EEECCCCS-------SSCCCHHHHHHHHHHHTCCEEEE-SSC-------------------------------------C
T ss_pred eEEcccCC-------CCCcCHHHHHHHHHhcCCCEEEE-cCC-------------------------------------C
Confidence 88985321 12234678899999999999999 211 0
Q ss_pred chHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHH-HHHHHHhCCCCcEEEEeccCCC
Q 008330 138 LPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGL-TKMATIFNGVRNVVGMSLRNEL 216 (570)
Q Consensus 138 ~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w-~~iA~ryk~~p~Vig~dL~NEP 216 (570)
..++++++..||+|+|.+....- . . . ..+++. ..-| +.-...|-...+|.++-+-||+
T Consensus 37 -------~~vL~A~~~tgi~v~lgv~n~~~-------~--~-~---a~~~~~-a~~Wv~~nv~~y~~~~~i~~I~VGNEv 95 (306)
T 1ghs_A 37 -------GQALSALRNSGIGLILDIGNDQL-------A--N-I---AASTSN-AASWVQNNVRPYYPAVNIKYIAAGNEV 95 (306)
T ss_dssp -------HHHHHHTTTSCCEEEEECCGGGH-------H--H-H---HHCHHH-HHHHHHHHTTTTTTTSEEEEEEEEESC
T ss_pred -------HHHHHHHHhcCCEEEEeccccch-------h--h-h---hhCHHH-HHHHHHHHHhhhCCCceEEEEEEeccc
Confidence 35778888999999998543110 0 0 0 001222 2233 3344456555688899999999
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhcCCC
Q 008330 217 RGPKQNVKDWYRYMQLGAEAVHAANPE 243 (570)
Q Consensus 217 ~~~~~~~~~W~~~~~~~~~aIr~~dp~ 243 (570)
-.. .......+|+.+-+++++.+-.
T Consensus 96 l~~--~~~~L~~am~~v~~aL~~~gl~ 120 (306)
T 1ghs_A 96 QGG--ATQSILPAMRNLNAALSAAGLG 120 (306)
T ss_dssp CGG--GGGGHHHHHHHHHHHHHHHTCT
T ss_pred cCC--CHHHHHHHHHHHHHHHHHCCCC
Confidence 653 4667888888888888887654
|
| >3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0062 Score=66.11 Aligned_cols=236 Identities=11% Similarity=0.063 Sum_probs=122.8
Q ss_pred HHHHHHHHHcCCcEEEecccc----cccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 79 DMLSKRVVDMGFNCVRLTWPL----YLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRlPi~~----~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
.++++.|++++.-.||+|=.- ..|.+ +|...-++-.......+... +.-. -+++.+++|.+.
T Consensus 71 ~dv~~alk~l~~~~lR~PGG~~~~~y~W~d------~iGP~~~Rp~~~~~~W~~~~--~n~f------G~~Ef~~~~e~~ 136 (504)
T 3ug3_A 71 KDVLEAVKRIKVPNLRWPGGNFVSNYHWED------GIGPKDQRPVRFDLAWQQEE--TNRF------GTDEFIEYCREI 136 (504)
T ss_dssp HHHHHHHHHTTCSEEEESCSGGGGGCCGGG------GCSSGGGSCCEEETTTTEEE--CCCS------CHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEeCCCcccCcchhcc------CcCChHHCCCCcccCccccc--CCCC------CHHHHHHHHHHh
Confidence 678999999999999998321 11111 11100000000000011111 1111 279999999999
Q ss_pred CCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHH--------HHHHHHhC-CCC-cEEEEeccCCCCCCCC---
Q 008330 155 NVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGL--------TKMATIFN-GVR-NVVGMSLRNELRGPKQ--- 221 (570)
Q Consensus 155 Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w--------~~iA~ryk-~~p-~Vig~dL~NEP~~~~~--- 221 (570)
|.-+++-+-.-. + ...+...|+++. ..+-.... ..| +|--++|-||+.+.++
T Consensus 137 gaep~~~vN~G~-----------g----~~~ea~d~veY~n~~~~t~~~~lRa~~G~~~P~~vkyweiGNE~~G~~q~G~ 201 (504)
T 3ug3_A 137 GAEPYISINMGT-----------G----TLDEALHWLEYCNGKGNTYYAQLRRKYGHPEPYNVKFWGIGNEMYGEWQVGH 201 (504)
T ss_dssp TCEEEEECCCSS-----------C----CHHHHHHHHHHHHCCSSCHHHHHHHHTTCCSCCCCCEEEECSSTTSTTSTTC
T ss_pred CCeEEEEEECCC-----------C----CHHHHHHHHHHhcCCCCChHHHHHHHcCCCCCCCccEEEecCcccccccccC
Confidence 999998653211 1 001112333322 22222221 122 5777999999987652
Q ss_pred -ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcch--hhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhh
Q 008330 222 -NVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLS--FVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCG 298 (570)
Q Consensus 222 -~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~--~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~ 298 (570)
+.+++.+.+.+.++|||+++|+..|+..|... .+.. .+.... +.--.++.|+|.... |+-. ..
T Consensus 202 ~t~e~Y~~~~~~~a~Aik~~dP~I~lia~G~~~-~~W~~~~l~~~~-----~~vD~vs~H~Y~~~~---~~l~-----~~ 267 (504)
T 3ug3_A 202 MTADEYARAAKEYTKWMKVFDPTIKAIAVGCDD-PIWNLRVLQEAG-----DVIDFISYHFYTGSD---DYYE-----TV 267 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCTTCEEEECCCSC-HHHHHHHHHHHT-----TTCSEEEEEEEECCS---SHHH-----HH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCcEEEEECCCC-cchhHHHHHhcc-----cCCCEEEEeeCCCcH---HHHh-----hc
Confidence 46778888899999999999998888766431 1100 111111 112367999997432 1110 11
Q ss_pred HHHHHHHHHHH----HH------HhcCCCeEEeccccCCCCC--------CcchHHHHHHHHHHHHHC-C-Cc-eEEecc
Q 008330 299 RVVDNVMRLSG----FL------LEQGWPLFVSEFGADLRGN--------NVNDNRYLNCFFGVAAEL-D-WD-WALWTL 357 (570)
Q Consensus 299 ~~~~~~~~~~g----~l------~~~g~Pv~iGEFG~~~~~~--------~~~~~~~~~~~~~~~~~~-g-ig-w~~W~~ 357 (570)
.+.+.+++... .+ .+.+++|+++||+.-.... +..+.-....++..+.++ + +. -.||.+
T Consensus 268 ~~d~~i~~~~~~vr~~~d~~~~~~~~~i~i~vdEwn~w~~~~~~~l~~~~t~~dAl~~A~~L~~~~r~~D~V~mA~~A~l 347 (504)
T 3ug3_A 268 STVYLLKERLIGVKKLIDMVDTARKRGVKIALDEWNVWYRVSDNKLEEPYDLKDGIFACGVLVLLQKMSDIVPLANLAQL 347 (504)
T ss_dssp THHHHHHHHHHHHHHHHHTSHHHHHHTCEEEEEEEEECCSCCSSSCCCCCCHHHHHHHHHHHHHHHHHTTTCCEEEESCS
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhcCCCCceEeeccccccccCCccccccCCHHHHHHHHHHHHHHHhccCceeEEehhhh
Confidence 12222222221 11 1146899999999865321 222344444455555544 2 33 457765
|
| >2vse_A MTX holotoxin, mosquitocidal toxin; ADP-ribosyltransferase, lectin, ricin-B-like domain; 2.5A {Lysinibacillus sphaericus} PDB: 2vsa_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00048 Score=79.07 Aligned_cols=103 Identities=9% Similarity=0.109 Sum_probs=73.6
Q ss_pred cceeeCCCCc-eeeeecCCCCceecCCCCCC--CCccccCCc-----ceee-cccceEEeeccCCccceeccccC-CCCC
Q 008330 411 HKVIYHPATG-LCVQRKSFLDPLTLGPCTES--EAWSYTPHK-----TISL-KGAYFCLQAKHVGKPAKLGIICT-DCGS 480 (570)
Q Consensus 411 ~~~~~~~~tg-~c~~~~~~~~~~~~~~c~~~--~~W~~~~~~-----~~~~-~~~~~cl~a~~~g~~~~~~~~c~-~~~~ 480 (570)
.+.+....+| +|+++.+.. .+.+++|.++ ++|+++.++ .|+- .++++||+..+.|..+.+ ..|+ ..+|
T Consensus 420 tY~Ivn~~sg~kvLDv~~~s-nV~~w~~~g~~nQqW~~~~~g~~G~Y~I~n~~~sg~~Ldv~~~g~~v~~-~~~~g~~~Q 497 (841)
T 2vse_A 420 TYQVSSKLNENKVIEQISTN-KVHIFSNSDKENQVWNLIYNPILKAYKIKSLKYPNYSLAWDSNNTRTIV-AATGDYNDQ 497 (841)
T ss_dssp EEEEEETTEEEEEEEEETTT-EEEEEECCCCGGGCEEEEEETTTTEEEEEESSCTTCEEEECTTTTCBEE-EECSCCGGG
T ss_pred eEEEEEccCCCEEEEecCCC-CeEEecCCCCccccEEEeeccccceEEEEecCCCceEEEecCCCCcEEE-ecCCCCccc
Confidence 3566677788 799986542 3899999875 799998544 3554 378999999998877776 6676 7789
Q ss_pred ceeEeec--cccEEEEecCCCceEEEeecC----CC-ceeecce
Q 008330 481 TWEIISD--SKMHLSSKADNGTTVCLDVDS----SN-TIVTNTC 517 (570)
Q Consensus 481 ~W~~~s~--~~~~~~~~~~~~~~~cld~~~----~~-~~~~~~c 517 (570)
+|++... +...|.. ...+++|||+.+ +| .|+.+.|
T Consensus 498 qW~l~~~gdG~y~I~n--~~~Sg~~LDV~~~stanGt~v~~w~~ 539 (841)
T 2vse_A 498 YWLIERNEDNTYIIRN--YENRKIVLDLSNGSTTDGNGLLGFEF 539 (841)
T ss_dssp EEEEEECTTSCEEEEE--SSSTTEEEEEGGGCCSTTCCEEEEEC
T ss_pred EEEEEECCCCeEEEEE--cCCCCceEecCCCCCCCCCeEEEeCC
Confidence 9999774 4444433 245789999962 55 5555655
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00028 Score=77.48 Aligned_cols=78 Identities=15% Similarity=0.151 Sum_probs=59.7
Q ss_pred cceeeCCCCceeeeecCC----CCceecCCCCCC--CCccccCCc----ceeecccceEEeeccC----CccceeccccC
Q 008330 411 HKVIYHPATGLCVQRKSF----LDPLTLGPCTES--EAWSYTPHK----TISLKGAYFCLQAKHV----GKPAKLGIICT 476 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~----~~~~~~~~c~~~--~~W~~~~~~----~~~~~~~~~cl~a~~~----g~~~~~~~~c~ 476 (570)
++.+....+|+|+++.+. ..++.+++|+++ |+|.+++.+ .|+-+.+++||+..+. |.++.+ +.|+
T Consensus 409 ~y~i~n~~sg~cLdv~~~~~~~G~~v~~~~c~g~~nQ~W~~~~~g~g~y~i~~~~sg~cLdv~~~s~~~G~~v~~-~~c~ 487 (526)
T 3vsf_A 409 YKKIVNVKSGRALDVKDESKEDGGVLIQYTSNGGYNQHWKFTDIGDGYYKISSRHCGKLIDVRKWSTEDGGIIQQ-WSDA 487 (526)
T ss_dssp EEEEEESSSCCEEEEGGGCCSTTEEEEEECCCCCGGGCEEEEEEETTEEEEEESSSCCEEEEGGGCCSTTEEEEE-ECCC
T ss_pred EEEEEECCCCCEEEeCCCCCCCCCEEEEecCCCCcccEEEEEECCCCeEEEEECCCCCEEEeCCCCCCCCCEEEE-EcCC
Confidence 456777899999998532 356999999985 799998765 5777789999999874 444544 8999
Q ss_pred -CCCCceeEeeccc
Q 008330 477 -DCGSTWEIISDSK 489 (570)
Q Consensus 477 -~~~~~W~~~s~~~ 489 (570)
+++|+|++...+.
T Consensus 488 g~~nQ~W~~~~v~~ 501 (526)
T 3vsf_A 488 GGTNQHWKLVLVSS 501 (526)
T ss_dssp CCGGGCEEEEEC--
T ss_pred CCccCeEEEEecCC
Confidence 7789999966543
|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00057 Score=75.66 Aligned_cols=68 Identities=19% Similarity=0.406 Sum_probs=55.7
Q ss_pred CCCceeeeecCCCCceecCCCCC---CCCccccCCcceeecccceEEeeccCCccceeccccC-C-CCCceeEe
Q 008330 417 PATGLCVQRKSFLDPLTLGPCTE---SEAWSYTPHKTISLKGAYFCLQAKHVGKPAKLGIICT-D-CGSTWEII 485 (570)
Q Consensus 417 ~~tg~c~~~~~~~~~~~~~~c~~---~~~W~~~~~~~~~~~~~~~cl~a~~~g~~~~~~~~c~-~-~~~~W~~~ 485 (570)
..+++|+++.+...++.+++|.+ +|+|.|+.++.|.-..+++||++.+.|..+.+ ..|+ + ++|+|++.
T Consensus 485 ~~~~~CLd~~~~g~~v~l~~C~~~~~nQ~W~~~~~g~i~~~~sg~CLd~~~~~~~v~l-~~C~~~~~~Q~W~~~ 557 (570)
T 2d7i_A 485 HTKKFCFDAISHTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRIFM-NTCNPSSLTQQWLFE 557 (570)
T ss_dssp SCCSBCCBCCSSSSBCBCCBCCSSSSTTCCEECTTSCEEBTTTTBEEEECTTTCCEEE-ECCCTTCSTTCEEEE
T ss_pred cCCCcceeecCCCCeEEEEeCCCCCcCCeEEECCCCcEEeCCCCeeEeeeCCCCeEEE-EeCCCcCCCCEEEEe
Confidence 46889999965446699999987 48999998888877789999999988877666 7898 3 48999884
|
| >3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0046 Score=63.18 Aligned_cols=120 Identities=18% Similarity=0.131 Sum_probs=77.0
Q ss_pred EeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCC
Q 008330 58 CVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVD 137 (570)
Q Consensus 58 GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~ 137 (570)
||||.-. |-.-.+-.++++.+|+.||+.||| ++. +
T Consensus 3 GvnyG~~-------~~nlp~p~~vv~llks~gi~~VRl-Yda--------------------------------D----- 37 (316)
T 3em5_A 3 GVCYGMQ-------GNNLPPVSEVIALYKKSNITRMRI-YDP--------------------------------N----- 37 (316)
T ss_dssp EEECCCC-------CTTCCCHHHHHHHHHHTTCCEEEC-SSC--------------------------------C-----
T ss_pred eEEcCcC-------CCCCCCHHHHHHHHHHcCCCEEEE-ecC--------------------------------C-----
Confidence 8998421 112234678999999999999999 111 0
Q ss_pred chHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 138 LPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 138 ~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
..++.+++..||.|||.+-... -. ...++....+..++=...|.....|..+-+-||+-
T Consensus 38 -------~~vL~Al~~sgi~v~vGV~n~~---------l~-----~la~~~~A~~WV~~nV~~y~p~~~I~~IaVGNEvl 96 (316)
T 3em5_A 38 -------QAVLEALRGSNIELILGVPNSD---------LQ-----SLTNPSNAKSWVQKNVRGFWSSVRFRYIAVGNEIS 96 (316)
T ss_dssp -------HHHHHHHTTCCCEEEEEECGGG---------HH-----HHTSHHHHHHHHHHHTGGGTTTSCEEEEEEEESCC
T ss_pred -------HHHHHHhhcCCceEEEecccch---------hh-----hccCHHHHHHHHHHhhhhcCCCceEEEEEEecccc
Confidence 2478899999999999864311 00 00122222222233344565567888899999986
Q ss_pred CCCCC----hhHHHHHHHHHHHHHHhcCCC
Q 008330 218 GPKQN----VKDWYRYMQLGAEAVHAANPE 243 (570)
Q Consensus 218 ~~~~~----~~~W~~~~~~~~~aIr~~dp~ 243 (570)
..... ......+|+.+-.++++++=.
T Consensus 97 ~~~~~t~~~~~~LvpAm~nv~~AL~~aGL~ 126 (316)
T 3em5_A 97 PVNRGTAWLAQFVLPAMRNIHDAIRSAGLQ 126 (316)
T ss_dssp TTCTTTGGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred cCCCccccCHHHHHHHHHHHHHHHHHCCCC
Confidence 54322 566778888888888888754
|
| >2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.059 Score=57.75 Aligned_cols=192 Identities=14% Similarity=0.150 Sum_probs=104.6
Q ss_pred HHHHHHHHhc--CCCEEEEecCCCCCCccccCCCC--CCCCCCCCCCHHHHHHHHHHHHHHhCCC-CcEEEEeccCCCCC
Q 008330 144 FQAVVASLGN--NNVMVILDNHISKPGWCCSNSDG--NGFFGDQYFNPDLWIKGLTKMATIFNGV-RNVVGMSLRNELRG 218 (570)
Q Consensus 144 ld~vV~~a~~--~Gl~VILD~H~~~~~w~~~~~dg--ng~~~d~~~~~~~~~~~w~~iA~ryk~~-p~Vig~dL~NEP~~ 218 (570)
.-.+++.|.+ .+|+++..-.. +|.|-.....- .+..... ..+.|.+++.+.++.|+.+ =.|-++.+.|||..
T Consensus 123 ~~~~lk~A~~~~~~l~i~aspWS-pP~wMk~n~~~~~gg~L~~~--~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~ 199 (447)
T 2wnw_A 123 LIPLISGALRLNPHMKLMASPWS-PPAFMKTNNDMNGGGKLRRE--CYADWADIIINYLLEYRRHGINVQALSVQNEPVA 199 (447)
T ss_dssp THHHHHHHHHHCTTCEEEEEESC-CCGGGBTTSCSBSCCBBCGG--GHHHHHHHHHHHHHHHHHTTCCCCEEESCSSTTC
T ss_pred HHHHHHHHHHhCCCcEEEEecCC-CcHHhccCCCcCCCCcCCHH--HHHHHHHHHHHHHHHHHHcCCCeeEEeeeccCCC
Confidence 3456777766 56888877664 45675432211 1211111 2477888888888888754 23678999999986
Q ss_pred CC------CChhHHHHHHH-HHHHHHHhcCC-CcEEEEeCCCCCCcchh---hhhcccCcCCCCCEEEEEeecCCCCCCC
Q 008330 219 PK------QNVKDWYRYMQ-LGAEAVHAANP-EVLVILSGLNFDKDLSF---VRNQAVNLTFTGKLVFEAHWYGFTDGQA 287 (570)
Q Consensus 219 ~~------~~~~~W~~~~~-~~~~aIr~~dp-~~lIiVeG~~w~~dl~~---~~~~p~~l~~~~nlVys~H~Y~~~~~~~ 287 (570)
.. -+.++..+++. .+..++++.+. +.-|++...+|+..... +...|-... ---++.+|+|....
T Consensus 200 ~~~~~s~~~t~~~~~~fik~~L~p~l~~~gl~~~kI~~~D~n~~~~~~~~~~il~d~~a~~--~v~~ia~H~Y~g~~--- 274 (447)
T 2wnw_A 200 VKTWDSCLYSVEEETAFAVQYLRPRLARQGMDEMEIYIWDHDKDGLVDWAELAFADEANYK--GINGLAFHWYTGDH--- 274 (447)
T ss_dssp CCSSBCCBCCHHHHHHHHHHTHHHHHHHTTCTTCEEEEEEEEGGGHHHHHHHHTTSHHHHH--HCCEEEEECTTCCC---
T ss_pred CCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEeCCCccchhhHHHHHhcCHhHHh--hCCEEEEEccCCCc---
Confidence 42 13455666665 56678888877 55555544444311111 111110000 11278999996321
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCC-CcchHHH---HHHHHHHHHHCCCceEEeccC
Q 008330 288 WVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGN-NVNDNRY---LNCFFGVAAELDWDWALWTLV 358 (570)
Q Consensus 288 w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~-~~~~~~~---~~~~~~~~~~~gigw~~W~~~ 358 (570)
...+. .+.+ .-.+.+++++|.+...... ......| .+.++.-++..--+|.+|.+-
T Consensus 275 ---------~~~l~-~~~~-----~~p~k~lw~TE~~~~~~~~~~~~~g~w~~~a~~ii~~~~~~~~~~~~Wnl~ 334 (447)
T 2wnw_A 275 ---------FSQIQ-YLAQ-----CLPDKKLLFSEGCVPMESDAGSQIRHWHTYLHDMIGNFKSGCSGFIDWNLL 334 (447)
T ss_dssp ---------HHHHH-HHHH-----HCTTSEEEEEECCCBCCCSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEESE
T ss_pred ---------HHHHH-HHHH-----HCCCCeEEEeccccCCcccCCCCCCcHHHHHHHHHHHHhcCCEEEEEhhhh
Confidence 01111 1111 0147899999998643211 1111233 555555555444479999874
|
| >3tp4_A Computational design of enzyme; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.98A {Synthetic construct} PDB: 2x2y_A 2bvy_A 2bvt_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.015 Score=62.25 Aligned_cols=198 Identities=11% Similarity=0.091 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCC----------CCHHHHHHHHHHHHHH---hCCCC-
Q 008330 140 LIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQY----------FNPDLWIKGLTKMATI---FNGVR- 205 (570)
Q Consensus 140 ~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~----------~~~~~~~~~w~~iA~r---yk~~p- 205 (570)
.++.+++.|.++.++|=.|-|..|...|. .+..||.... ...++|...+++||+. +++..
T Consensus 90 ~~~~i~~~i~~~~~rGGIvTlsWH~~np~------tg~~~~dts~~~~~~ilpGg~~~~~y~~~l~~iA~~l~~Lk~~~g 163 (475)
T 3tp4_A 90 NIALFADYIRKADAIGGVNTVGAGVENFV------TGGSFYDTSGDTLRAVLPGGSHHAELVAYLDDIAELADASRRDDG 163 (475)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEEESGGGS------TTSTTCC---CHHHHHSTTSTTHHHHHHHHHHHHHHHHHCBCTTS
T ss_pred cHHHHHHHHHHHHhCCCEEEEEeCCCCCC------CCCCcccCCHHHHHHhcCCCchhHHHHHHHHHHHHHHHhhccccC
Confidence 45667778888899999999999985431 1223342210 1124677777887775 44421
Q ss_pred ---cEEEEeccCCCCCCCC-------ChhHHHHHHHHHHHHHHh-cCCCcEEEEeCCC--CCCcch-hhhhcccCcCCCC
Q 008330 206 ---NVVGMSLRNELRGPKQ-------NVKDWYRYMQLGAEAVHA-ANPEVLVILSGLN--FDKDLS-FVRNQAVNLTFTG 271 (570)
Q Consensus 206 ---~Vig~dL~NEP~~~~~-------~~~~W~~~~~~~~~aIr~-~dp~~lIiVeG~~--w~~dl~-~~~~~p~~l~~~~ 271 (570)
.|+ +-+..|..+.+- +.+++.+..+.+++++|+ .+-+.+++|=.++ ++.+-. ....+| -++
T Consensus 164 ~gvPVl-~Rp~HEmnG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwvwspn~~~~~~~~~~~~~YP----GDd 238 (475)
T 3tp4_A 164 TLIPIV-FRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYP----GDA 238 (475)
T ss_dssp CBCCEE-EEEEECCCSSSCCCHHHHHSHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCSCCTTCHHHHGGGCC----CTT
T ss_pred CCceEE-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCccchhhcCC----CCC
Confidence 255 899999988642 356788889999999996 4545666663222 222211 122233 111
Q ss_pred -CEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCC--CCcchHHHHHHHHHHHHHC
Q 008330 272 -KLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRG--NNVNDNRYLNCFFGVAAEL 348 (570)
Q Consensus 272 -nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~--~~~~~~~~~~~~~~~~~~~ 348 (570)
=-|+.+-.|..... ...-+.+...+.....|..+.+.|+.|+|+|..... ..-.+..|++.+++.++++
T Consensus 239 yVDiVG~D~Y~~~~~--------~~f~~~~~~~l~~l~~~A~~~gKpiaItE~G~~~~~~~~G~~da~W~t~~l~~i~~~ 310 (475)
T 3tp4_A 239 FVDVLGLDTYDSTGS--------DAFLAGLVADLRMIAEIADEKGKVSAFTRFGVSGGVGTNGSSPAQWFTKVLAAIKAD 310 (475)
T ss_dssp TCSEECCEEEESSCC--------HHHHHHHHHHHHHHHHHHHHHTCEECBCEEEETTCSSTTSCCCTTHHHHHHHHHHTC
T ss_pred eEEEEEEeccCCCCc--------hhHHHHHHHHHHHHHHHHhhCCCcEEEEeeccCCCcccCCCchHHHHHHHHHHHHhC
Confidence 12445555543211 111122222333333444458999999999998621 1113579999999999887
Q ss_pred ----CCceE-Eec
Q 008330 349 ----DWDWA-LWT 356 (570)
Q Consensus 349 ----gigw~-~W~ 356 (570)
.+.|+ +|.
T Consensus 311 P~v~~iaYvl~Wr 323 (475)
T 3tp4_A 311 PVASRNAYMETGE 323 (475)
T ss_dssp TTTTCCCEEEECC
T ss_pred cccceeEEEEEEc
Confidence 67776 676
|
| >4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0058 Score=63.06 Aligned_cols=172 Identities=10% Similarity=0.081 Sum_probs=107.6
Q ss_pred cCCeEEcCCCCEEEEEEee--CCCCCCccccC-CCCCChHHHHHHHHHHcCCcEEEecccc-cccccCccccchhhhhhh
Q 008330 42 NSRWIVDENGHRVKLACVN--WVSHLEPVVAE-GLSKQPMDMLSKRVVDMGFNCVRLTWPL-YLATNDSLASLTVRQSFQ 117 (570)
Q Consensus 42 ~G~~IVd~~G~~v~L~GVN--w~g~~~~~v~~-Gl~~~~~~~~~~~i~~~GfN~VRlPi~~-~~~~~~~~~n~tv~~s~~ 117 (570)
+++.|| +..+.+++.|.= -.++. +|+ .++....+++++.||++|++.|=|.... +-+.- |+.. . ..
T Consensus 21 ~~~~~~-~~~~~~~itgtfld~~~~d---~~~qnWd~~eW~~~~~~mK~~GikyvIl~~~~~~gf~~--~pS~-~--~~- 90 (340)
T 4h41_A 21 ESKLIV-PKNNGLKITGTFLDEISHD---IPHQNWGEKEWDLDFQHMKRIGIDTVIMIRSGYRKFMT--YPSP-Y--LL- 90 (340)
T ss_dssp CCCBSS-CSSCSCCEEEEEECTTCSS---SCCCCCCHHHHHHHHHHHHHTTCCEEEESCSEETTEES--SCCH-H--HH-
T ss_pred ccceec-cccCCccceEEEehhhcCC---CcccCCCHHHHHHHHHHHHHcCCCEEEEEEEeeCCeec--cCcc-c--cc-
Confidence 455555 566677778842 22222 222 2233447889999999999988654422 11110 1110 0 00
Q ss_pred hccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHH
Q 008330 118 KLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKM 197 (570)
Q Consensus 118 ~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~i 197 (570)
..+. ..| ..+.++.++++|.++||+|.+-++.+...|..+ ++ ....+.-..+...+
T Consensus 91 -------~~~~--~~p------~~Dlv~~~l~aa~k~Gmkv~~Gly~S~~~W~~~------d~---~~e~e~~~~~i~El 146 (340)
T 4h41_A 91 -------KKGC--YMP------SVDLVDMYLRLAEKYNMKFYFGLYDSGRYWDTG------DL---SWEIEDNKYVIDEV 146 (340)
T ss_dssp -------HTTC--CCC------SBCHHHHHHHHHHHTTCEEEEECCBCSHHHHHS------CG---GGGHHHHHHHHHHH
T ss_pred -------ccCc--cCC------cccHHHHHHHHHHHhCCeEEEecCCChhhcCCC------CH---HHHHHHHHHHHHHH
Confidence 0011 112 135699999999999999999988654444211 01 11234556778899
Q ss_pred HHHhC-CCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 198 ATIFN-GVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 198 A~ryk-~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
.++|. +++.+.|+=|=||+........ ...+.+.+..+++.|...++|+.
T Consensus 147 ~~~Yg~~h~af~GWYi~~Ei~~~~~~~~---~~~~~l~~~lk~ls~~lp~~ISp 197 (340)
T 4h41_A 147 WKMYGEKYKSFGGWYISGEISRATKGAI---DAFRAMGKQCKDISNGLPTFISP 197 (340)
T ss_dssp HHHTTTTCTTEEEEEECCCCSSCCTTHH---HHHHHHHHHHHHHTTSCCEEECC
T ss_pred HHHhhccCCCeeEEEeccccCchhhhHH---HHHHHHHHHHHHhcCCCceEEee
Confidence 99997 6899999999999976432333 34467788899999999999987
|
| >3aj6_A Main hemagglutinin component; toxin, beta-trefoil; HET: NGA; 1.48A {Clostridium botulinum} PDB: 1qxm_A 3aj5_A* 2ehm_A* 2ehi_A* 2ehn_A* 3ah1_A* 3ah2_A* 3ah4_A* 2e4m_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0021 Score=65.00 Aligned_cols=102 Identities=16% Similarity=0.139 Sum_probs=70.5
Q ss_pred cceeeC-CCCceeeeecCCCCceecCCCCCC--CCccccC-------Ccc--eeec-ccceEEeeccCCccceeccccC-
Q 008330 411 HKVIYH-PATGLCVQRKSFLDPLTLGPCTES--EAWSYTP-------HKT--ISLK-GAYFCLQAKHVGKPAKLGIICT- 476 (570)
Q Consensus 411 ~~~~~~-~~tg~c~~~~~~~~~~~~~~c~~~--~~W~~~~-------~~~--~~~~-~~~~cl~a~~~g~~~~~~~~c~- 476 (570)
++++.. ..+++|+++.+. .++.+++|+++ ++|..++ +|. |.-+ .+++||+...+|.++.+ ++|.
T Consensus 103 ~y~i~n~~~s~~vLdv~~g-s~v~~~~~~g~~~Q~w~i~~~~~~~i~dG~Y~i~~~~~sgk~lDv~~~g~~V~~-w~~~g 180 (286)
T 3aj6_A 103 NVIIRNYMNPNLVLQYNID-DTLMVSTQTSSSNQFFKFSNCIYEALNNRNCKLQTQLNSDRFLSKNLNSQIIVL-WQWID 180 (286)
T ss_dssp CEEEEESSCTTEEEEECTT-SCEEEEECCSCGGGCEEEEEHHHHHHTTEEEEEEETTCTTCEEEECTTSSBEEE-ECCCC
T ss_pred EEEEEECCCCceEEEecCC-CeEEEEecCCCCceeEEEeccccccCCCceEEEEecCCCceEEEecCCCceEEE-eCCCC
Confidence 345555 478999999655 35899999986 6999876 453 3333 46799999767877776 8888
Q ss_pred CCCCceeEeeccc-cEEEEecCCCceEEEeecC-CC-ceeec
Q 008330 477 DCGSTWEIISDSK-MHLSSKADNGTTVCLDVDS-SN-TIVTN 515 (570)
Q Consensus 477 ~~~~~W~~~s~~~-~~~~~~~~~~~~~cld~~~-~~-~~~~~ 515 (570)
..+|+|++..++. .....+. ..+.+|||+.+ +| .|...
T Consensus 181 ~~nQ~W~~~~~~~~~~y~i~~-~~s~~~l~~~s~~g~~v~~~ 221 (286)
T 3aj6_A 181 SSRQKWIIEYNETKSAYTLKC-QENNRYLTWIQNSNNYVETY 221 (286)
T ss_dssp CGGGCEEEEEETTTTEEEEEE-TTTCCEEEECCSTTCBEEEE
T ss_pred CccceEEEEECCCCCeEEEEE-CCCCEEEeccCCCCCEEEEE
Confidence 7789999987763 3333332 23488999964 55 33344
|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00083 Score=71.92 Aligned_cols=68 Identities=16% Similarity=0.313 Sum_probs=55.0
Q ss_pred CCCceeeeecCC--CCceecCCCCCC--CCccccCCcceeecccceEEeeccC----CccceeccccC-CCCCceeEe
Q 008330 417 PATGLCVQRKSF--LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKHV----GKPAKLGIICT-DCGSTWEII 485 (570)
Q Consensus 417 ~~tg~c~~~~~~--~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~~----g~~~~~~~~c~-~~~~~W~~~ 485 (570)
+.+|+|+++.+. ..++.+++|+++ |+|.++.+|.|+-+.+++||++.+. |.++.+ +.|. +++|+|+++
T Consensus 360 ~~sg~CLdv~~~~~G~~v~~~~C~g~~nQ~W~~~~~G~i~~~~sg~cLdv~~~s~~~g~~v~~-~~c~g~~~Q~W~~~ 436 (436)
T 2d1z_A 360 VYGDKCLDAAGTGNGTKVQIYSCWGGDNQKWRLNSDGSIVGVQSGLCLDAVGGGTANGTLIQL-YSCSNGSNQRWTRT 436 (436)
T ss_dssp ETTTEEEEESSSSTTCBEEEEECCCCGGGCEEECTTSCEEETTTCCEEEEGGGCCSTTCBEEE-ECCCCCGGGCEEEC
T ss_pred ECCCeEEEECCCCCCceEEEEecCCCCCceEEECCCCeEEECCCCCeEecCCCCCCCCCEEEE-EeCCCCCCceEEeC
Confidence 568999999642 356999999985 7999998888877789999999873 565555 8999 778999873
|
| >2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.068 Score=58.02 Aligned_cols=93 Identities=6% Similarity=0.012 Sum_probs=60.4
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHH--------HHHHHHHhCC-CC-cEEEEecc
Q 008330 144 FQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKG--------LTKMATIFNG-VR-NVVGMSLR 213 (570)
Q Consensus 144 ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~--------w~~iA~ryk~-~p-~Vig~dL~ 213 (570)
+++.+++|.+.|...++-+.... + . ..+...|+++ |..+-.++.- +| +|--+||-
T Consensus 110 ~~Ef~~~~~~~gaep~~~vn~g~-----------g---~-~~ea~d~veY~n~~~~t~w~~lRa~~G~~eP~~vkyweiG 174 (496)
T 2vrq_A 110 THEFMMLCELLGCEPYISGNVGS-----------G---T-VQEMSEWVEYITFDGESPMANWRRENGREKPWRIKYWGVG 174 (496)
T ss_dssp HHHHHHHHHHHTCEEEEEECCSS-----------C---C-HHHHHHHHHHHHCCSBSHHHHHHHHTTCCSCCCCCEEEEC
T ss_pred HHHHHHHHHHcCCeEEEEEECCC-----------C---c-HHHHHHHHHHhCCCCCChHHHHHHHcCCCCCCCceEEEEc
Confidence 58999999999999988764321 1 0 0111223332 3344444432 22 47789999
Q ss_pred CCCCCCC--CChhHHHHHHHHHHHHHHhc-CCCcEEEEeCC
Q 008330 214 NELRGPK--QNVKDWYRYMQLGAEAVHAA-NPEVLVILSGL 251 (570)
Q Consensus 214 NEP~~~~--~~~~~W~~~~~~~~~aIr~~-dp~~lIiVeG~ 251 (570)
||+.+.+ .+.+++.+.+.+.+++||++ +|+..|+..|.
T Consensus 175 NE~~g~~g~~~~~~Y~~~~~~~a~a~k~~~dp~i~~ia~G~ 215 (496)
T 2vrq_A 175 NQNWGCGGNMRAEYYADLYRQFQTYLRNYGDNKLHKIACGA 215 (496)
T ss_dssp SCTTTTTTCCCHHHHHHHHHHHHHTCCCCTTCCCEEEEEEE
T ss_pred CcccccCCCCCHHHHHHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 9997643 24566777778899999999 88877776554
|
| >2vse_A MTX holotoxin, mosquitocidal toxin; ADP-ribosyltransferase, lectin, ricin-B-like domain; 2.5A {Lysinibacillus sphaericus} PDB: 2vsa_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0017 Score=74.64 Aligned_cols=105 Identities=14% Similarity=0.137 Sum_probs=72.9
Q ss_pred cceeeCC-CCceeeeecCC----CCceecCCCCCC--CCccccC-------Ccc--eeecccc-eEEeeccCCccceecc
Q 008330 411 HKVIYHP-ATGLCVQRKSF----LDPLTLGPCTES--EAWSYTP-------HKT--ISLKGAY-FCLQAKHVGKPAKLGI 473 (570)
Q Consensus 411 ~~~~~~~-~tg~c~~~~~~----~~~~~~~~c~~~--~~W~~~~-------~~~--~~~~~~~-~cl~a~~~g~~~~~~~ 473 (570)
++.+..+ .+|+|+++.+. .++|.+++|.++ ++|..++ ++. |.-+.++ +||+..+.+ .+.+ +
T Consensus 367 ~y~I~N~~~sglvLDv~~gstanGT~Vq~~~~ngs~~Q~W~i~~~~~~pi~~GtY~Ivn~~sg~kvLDv~~~s-nV~~-w 444 (841)
T 2vse_A 367 FYKFRNLSDPSKILDLKDGNTLNKTPLVVSSENSSSSQEWLIEKTNYQTVKDGTYQVSSKLNENKVIEQISTN-KVHI-F 444 (841)
T ss_dssp CEEEEESSCTTCEEEEGGGCCSTTCBEEEECCCSCGGGCEEEEECCCCCSCSEEEEEEETTEEEEEEEEETTT-EEEE-E
T ss_pred eEEEEecCCCceEEEeccCcCCCCCEEEEecCCCCcccceecccccccccccceEEEEEccCCCEEEEecCCC-CeEE-e
Confidence 4566666 89999999442 367999999986 7999865 333 3334445 899999876 3444 7
Q ss_pred ccC-CCCCceeEeeccc-cEEEEecCCCceEEEeecCCC-ceeecce
Q 008330 474 ICT-DCGSTWEIISDSK-MHLSSKADNGTTVCLDVDSSN-TIVTNTC 517 (570)
Q Consensus 474 ~c~-~~~~~W~~~s~~~-~~~~~~~~~~~~~cld~~~~~-~~~~~~c 517 (570)
+|. ..+|+|++..++. .....+...++.+|||+.++| .++...|
T Consensus 445 ~~~g~~nQqW~~~~~g~~G~Y~I~n~~~sg~~Ldv~~~g~~v~~~~~ 491 (841)
T 2vse_A 445 SNSDKENQVWNLIYNPILKAYKIKSLKYPNYSLAWDSNNTRTIVAAT 491 (841)
T ss_dssp ECCCCGGGCEEEEEETTTTEEEEEESSCTTCEEEECTTTTCBEEEEC
T ss_pred cCCCCccccEEEeeccccceEEEEecCCCceEEEecCCCCcEEEecC
Confidence 888 7889999998874 434444434789999997644 4444443
|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.00096 Score=71.68 Aligned_cols=67 Identities=21% Similarity=0.504 Sum_probs=53.5
Q ss_pred CceeeeecCCCCceecCCCCC---CCCccccC-CcceeecccceEEeecc--CCccceeccccC-CCCCceeEee
Q 008330 419 TGLCVQRKSFLDPLTLGPCTE---SEAWSYTP-HKTISLKGAYFCLQAKH--VGKPAKLGIICT-DCGSTWEIIS 486 (570)
Q Consensus 419 tg~c~~~~~~~~~~~~~~c~~---~~~W~~~~-~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~-~~~~~W~~~s 486 (570)
+|+|+++.....++.+++|++ +|+|.++. ++.|.-..+++||++.+ .|..+.+ ..|+ +++|+|++..
T Consensus 392 ~~~Cld~~~~g~~v~l~~C~~~~~~Q~W~~~~~~g~i~~~~sg~CLd~~~~~~~~~~~~-~~C~~~~~Q~W~~~~ 465 (472)
T 1xhb_A 392 DDLCLDVSKLNGPVTMLKCHHLKGNQLWEYDPVKLTLQHVNSNQCLDKATEEDSQVPSI-RDCTGSRSQQWLLRN 465 (472)
T ss_dssp TTEEEECCSTTCCCEEEECCTTCGGGCEEEETTTTEEEESSSCEEEESCCSSSTTSCEE-EECCCCGGGCEEECC
T ss_pred cceEEeecCCCceEEEEeCCCCCcCceEEEeCCCCeEEeCCCCeeEccccCCCCCeEEE-EeCCCCCcceEEEeC
Confidence 579999864445699999987 37999987 67777778999999876 4676666 8898 7789999843
|
| >2v3g_A Endoglucanase H; beta-1 4 beta-1 3 glucanase, lichenase, hydrolase, glycosidase, glycoside hydrolase family 26; HET: BGC NOY; 1.20A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 2bv9_A 2bvd_A* 2cip_A* 2cit_A* 2vi0_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.068 Score=53.72 Aligned_cols=208 Identities=13% Similarity=0.134 Sum_probs=115.8
Q ss_pred HHHHHHHHHhcCCCEEEEecCCCCCCc-cccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCcEEEEeccCCCCCC
Q 008330 143 AFQAVVASLGNNNVMVILDNHISKPGW-CCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFN--GVRNVVGMSLRNELRGP 219 (570)
Q Consensus 143 ~ld~vV~~a~~~Gl~VILD~H~~~~~w-~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk--~~p~Vig~dL~NEP~~~ 219 (570)
.+.+.++.+.++|-.++|..|-..+.+ .+. + | . + +. .++++|+..+ +.| |+ +-+..|..+.
T Consensus 50 ~~~~~~~~~~~~G~i~~isw~P~~~~~~~i~--~--G----~-~--d~---~i~~~A~~l~~~g~p-V~-~R~~hE~nG~ 113 (283)
T 2v3g_A 50 WVRPYADAVYNNGSILMITWEPWEYNTVDIK--N--G----K-A--DA---YITRMAQDMKAYGKE-IW-LRPLHEANGD 113 (283)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECTTCCHHHHH--T--T----T-T--HH---HHHHHHHHHHHHCSC-EE-EEESCCTTSS
T ss_pred HHHHHHHHHHhCCCEEEEEeCCCCCCHHHhc--C--C----c-h--HH---HHHHHHHHHHhcCCc-EE-EEeccccCCC
Confidence 345667778899999999999322111 011 1 1 1 1 22 3444444444 444 55 9999999875
Q ss_pred C-----------CChhHHHHHHHHHHHHHHhcCCCcEEEEeCCC---CCCcchhhhhcccCcCCCC-CEEEEEeecCCCC
Q 008330 220 K-----------QNVKDWYRYMQLGAEAVHAANPEVLVILSGLN---FDKDLSFVRNQAVNLTFTG-KLVFEAHWYGFTD 284 (570)
Q Consensus 220 ~-----------~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~---w~~dl~~~~~~p~~l~~~~-nlVys~H~Y~~~~ 284 (570)
+ .+.+++.+..+.+++++|+.+-+.+++|=.++ .+..-......| -++ =-|+.+-.|....
T Consensus 114 Wf~Wg~~~~~~~~~p~~y~~~wr~~~~~~r~~g~~n~~~vw~p~~~~~~~~~~~~~~YP----GDdyVDivG~D~Y~~~~ 189 (283)
T 2v3g_A 114 WYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWVFNVNCDNVGNGTSYLGHYP----GDNYVDYTSIDGYNWGT 189 (283)
T ss_dssp SSTTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTTEEEBCCEESSCCSTTCCSSTTCC----CGGGCSBEEEEEEECTT
T ss_pred cccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCCCCccchhhhCC----CCCEEEEEEEEccCCCC
Confidence 2 15778999999999999998666677762221 111111111222 111 1245666665432
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHH-CC-CceEEeccCceee
Q 008330 285 GQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAE-LD-WDWALWTLVGSYY 362 (570)
Q Consensus 285 ~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~-~g-igw~~W~~~G~y~ 362 (570)
.++|... .. .+.+.+.....++...+.|+.|+|+|....+++ ...|++.+++.+.+ .. +--+.|- +
T Consensus 190 ~~~~~~~-~~----~f~~~~~~~~~~~~~~~Kpi~i~E~G~~~~ggd--k~~W~~~~~~~~~~~~p~~~~~~wf-n---- 257 (283)
T 2v3g_A 190 TQSWGSQ-WQ----SFDQVFSRAYQALASINKPIIIAEFASAEIGGN--KARWITEAYNSIRTSYNKVIAAVWF-H---- 257 (283)
T ss_dssp CCTTTCC-CC----CHHHHHHHHHHHHTTSSSCEEEEEEEECSTTSC--HHHHHHHHHHHHHHHCTTEEEEEEE-C----
T ss_pred cccccch-hH----hHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCc--hHHHHHHHHHHHHHhCCceEEEEEc-c----
Confidence 2222211 01 122233333344556899999999998865443 56899999888753 33 3233432 1
Q ss_pred cccCccCCCceeeeecCCCCCccchhHHHHHH
Q 008330 363 LREGVIGLNEYYGLFDWNWCDIRNSSFLERIS 394 (570)
Q Consensus 363 ~r~~~~~~~et~Gll~~dw~~~~~~~~~~~~~ 394 (570)
... ..||+-..+|..++.++
T Consensus 258 -----~~~-------~~dwr~~~~p~~~~a~~ 277 (283)
T 2v3g_A 258 -----ENK-------ETDWRINSSPEALAAYR 277 (283)
T ss_dssp -----CBS-------SSBCCTTSSHHHHHHHH
T ss_pred -----CCC-------CCCCcccCCHHHHHHHH
Confidence 000 25677666776665554
|
| >3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0019 Score=64.57 Aligned_cols=74 Identities=9% Similarity=0.056 Sum_probs=55.6
Q ss_pred cceeeCCCCceeeeecCC----CCceecCCCCCC--CCccccCC-c--ceeecccceEEeecc-----CCccceeccccC
Q 008330 411 HKVIYHPATGLCVQRKSF----LDPLTLGPCTES--EAWSYTPH-K--TISLKGAYFCLQAKH-----VGKPAKLGIICT 476 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~----~~~~~~~~c~~~--~~W~~~~~-~--~~~~~~~~~cl~a~~-----~g~~~~~~~~c~ 476 (570)
.+.+..+.||+|+++.+. .+++.+++|+++ |+|..++. + .|+-+.+++||+..+ +|. +.+ +++.
T Consensus 59 ~Y~I~N~~SGKcLDV~g~sTadGa~V~qW~~nGg~NQqW~l~~~~G~y~I~n~~SGkcLDV~~gsttanGa-V~q-Wt~~ 136 (286)
T 3phz_A 59 TYTVRNAFAGSYMDLAGHAATDGTAIIGYRPTGGDNQKWIISQINDVWKIKSKETGTFVTLLNGDGGGTGT-VVG-WQNI 136 (286)
T ss_dssp EEEEEETTTCCEEEEGGGCCSTTEEEEEECCCCCGGGCEEEEESSSCEEEEETTTCCEEEEETC---CCCE-EEE-ESCC
T ss_pred EEEEEECCCCcEEEeCCCcCCCCCeEEEeCCCCChhcEEEEEcCCCeEEEEECCCCcEEEeCCCCcCCCce-EEE-ccCC
Confidence 378888999999999542 367999999985 79999754 3 466678999999544 355 444 5544
Q ss_pred --CCCCceeEee
Q 008330 477 --DCGSTWEIIS 486 (570)
Q Consensus 477 --~~~~~W~~~s 486 (570)
+++|+|++..
T Consensus 137 tgg~NQqW~~~~ 148 (286)
T 3phz_A 137 TNNTSQNWTFQK 148 (286)
T ss_dssp CSSCTTCEEEEE
T ss_pred CCCccCcEEEEE
Confidence 8899999843
|
| >2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... | Back alignment and structure |
|---|
Probab=96.40 E-value=0.075 Score=57.72 Aligned_cols=197 Identities=12% Similarity=0.079 Sum_probs=104.6
Q ss_pred HHHHHHHHhcC---CCEEEEecCCCCCCccccCCCC--CCCCCCC--CCCHHHHHHHHHHHHHHhCCC-CcEEEEeccCC
Q 008330 144 FQAVVASLGNN---NVMVILDNHISKPGWCCSNSDG--NGFFGDQ--YFNPDLWIKGLTKMATIFNGV-RNVVGMSLRNE 215 (570)
Q Consensus 144 ld~vV~~a~~~---Gl~VILD~H~~~~~w~~~~~dg--ng~~~d~--~~~~~~~~~~w~~iA~ryk~~-p~Vig~dL~NE 215 (570)
.-.+++.|.++ +++++..-.. +|.|-.....- .+..... ....+.|.+++.+.++.|+.+ =.|-++.+.||
T Consensus 157 ~i~~lk~A~~~~~~~lki~aspWS-pP~wMk~n~~~~ggG~L~~~~~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNE 235 (497)
T 2nt0_A 157 KIPLIHRALQLAQRPVSLLASPWT-SPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENE 235 (497)
T ss_dssp HHHHHHHHHHHCSSCCEEEEEESC-CCGGGBTTCSSSSSCBBSSCTTSHHHHHHHHHHHHHHHHHHHTTCCCSEEESCSS
T ss_pred HHHHHHHHHhhCCCCcEEEEecCC-CcHHHhcCCCcCCCCccCCccchhHHHHHHHHHHHHHHHHHHcCCCeeEEeeccC
Confidence 34566666654 6888887664 46775432211 1211111 002467888888888888754 23778999999
Q ss_pred CCCCC----------CChhHHHHHHH-HHHHHHHhcCC-CcEEEEeCCCCCCcchh---hhhcccCcCCCCCEEEEEeec
Q 008330 216 LRGPK----------QNVKDWYRYMQ-LGAEAVHAANP-EVLVILSGLNFDKDLSF---VRNQAVNLTFTGKLVFEAHWY 280 (570)
Q Consensus 216 P~~~~----------~~~~~W~~~~~-~~~~aIr~~dp-~~lIiVeG~~w~~dl~~---~~~~p~~l~~~~nlVys~H~Y 280 (570)
|.... -+.++..+++. .+..++++.+- +.-|++...++...-.. +-..|-.. .---.+.+|+|
T Consensus 236 P~~~~~~~~~~~s~~~t~~~~~~fik~~L~p~L~~~gl~~~kI~~~D~n~~~~~~~~~~~l~d~~a~--~~v~~ia~H~Y 313 (497)
T 2nt0_A 236 PSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAA--KYVHGIAVHWY 313 (497)
T ss_dssp GGGGGSTTCCSSCCBCCHHHHHHHHHHTHHHHHHTSTTTTSEEEEEEEEGGGTTHHHHHHHTSHHHH--TTCCEEEEEEE
T ss_pred CCcccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhcCCCCceEEEecCCCCcchhHHHHHhcChhhH--hhcceEEEEec
Confidence 96521 13455566665 46677887664 55555543333211111 11111000 11237899999
Q ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCC-------CCcc-hHHHHHHHHHHHHHCCCce
Q 008330 281 GFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRG-------NNVN-DNRYLNCFFGVAAELDWDW 352 (570)
Q Consensus 281 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~-------~~~~-~~~~~~~~~~~~~~~gigw 352 (570)
...... ... .+..... .-.+.+++++|.+..... .... ...+.+.++..+...--+|
T Consensus 314 ~~~~~~----------~~~---~l~~~~~--~~p~k~lw~TE~~~~~~~~~~~~~~~~w~~a~~~a~~ii~~l~~~~~~~ 378 (497)
T 2nt0_A 314 LDFLAP----------AKA---TLGETHR--LFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGW 378 (497)
T ss_dssp TTSCCC----------HHH---HHHHHHH--HCTTSEEEEEEEECCCSTTSCSCCTTCHHHHHHHHHHHHHHHHTTEEEE
T ss_pred CCCCCC----------hHH---HHHHHHH--HCCCCcEEEecccCCCCCccCCCCcCcHHHHHHHHHHHHHHHhhcceee
Confidence 743210 011 1111000 114789999998765311 1111 2456667777776543479
Q ss_pred EEeccC
Q 008330 353 ALWTLV 358 (570)
Q Consensus 353 ~~W~~~ 358 (570)
.+|.+-
T Consensus 379 ~~Wnl~ 384 (497)
T 2nt0_A 379 TDWNLA 384 (497)
T ss_dssp EEEESE
T ss_pred Eeeeee
Confidence 999873
|
| >3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0025 Score=64.45 Aligned_cols=78 Identities=10% Similarity=-0.001 Sum_probs=58.1
Q ss_pred ccceeeCCCCceeeeecCC----CCceecCC----CCC-CCCccccCC---c--ceeecccceEEeeccC----Ccccee
Q 008330 410 LHKVIYHPATGLCVQRKSF----LDPLTLGP----CTE-SEAWSYTPH---K--TISLKGAYFCLQAKHV----GKPAKL 471 (570)
Q Consensus 410 ~~~~~~~~~tg~c~~~~~~----~~~~~~~~----c~~-~~~W~~~~~---~--~~~~~~~~~cl~a~~~----g~~~~~ 471 (570)
.++.+..+.||+|+++.+. .+++.+++ |.+ +++|..++. + .|+-+.+++||+..+. |.++.+
T Consensus 58 G~Y~I~n~~SGkcLDV~~~stanGt~V~qw~~~~~~~g~nQqW~l~~~~g~G~y~I~n~~SGk~LDV~g~stanGt~V~q 137 (293)
T 3ef2_A 58 DTFTLCNLFSGTYMDLYNGSSEAGTAVNGWQGTAFTTNPHQLWTIKKSSDGTSYKIQNYGSKTFVDLVNGDSSDGAKIAG 137 (293)
T ss_dssp TEEEEEETTTCCEEEEGGGCCSTTEEEEEECCCTTCCCGGGCEEEEECTTSSSEEEEETTTCCEEEEGGGCCSTTEEEEE
T ss_pred ceEEEEECCCCCEEecCCCCCCCCCEEEEeccCCCCCCCCcEEEEEEeCCCCEEEEEECCCCcEEEeCCCCCCCCCEEEE
Confidence 3567788899999999532 35689999 765 479999865 3 4666789999998874 555555
Q ss_pred ccc---cC-CCCCceeEeecc
Q 008330 472 GII---CT-DCGSTWEIISDS 488 (570)
Q Consensus 472 ~~~---c~-~~~~~W~~~s~~ 488 (570)
++ |+ +++|+|++...+
T Consensus 138 -w~~~~~~g~~nQqW~l~~~s 157 (293)
T 3ef2_A 138 -WTGTWDEGNPHQKWYFNRMS 157 (293)
T ss_dssp -ECCCSSCCCGGGCEEEEECE
T ss_pred -EeccCCCCCcccEEEEEecC
Confidence 77 77 889999995543
|
| >3ik2_A Endoglucanase A; TIM-like barrel, hydrolase; 2.20A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.022 Score=61.27 Aligned_cols=161 Identities=17% Similarity=0.221 Sum_probs=93.7
Q ss_pred HHHHHHHHHhCCC---CcEEEEeccCCCCC----------CCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCC------
Q 008330 192 KGLTKMATIFNGV---RNVVGMSLRNELRG----------PKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLN------ 252 (570)
Q Consensus 192 ~~w~~iA~ryk~~---p~Vig~dL~NEP~~----------~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~------ 252 (570)
++.+.+.++|... -+|-.|+|-|||.. ...+.++..+.+.+.+++||++||+..|+=....
T Consensus 154 e~v~~l~~~~G~~~~p~~Vkyw~lgNEpdlW~~tH~dvhp~~~t~eEY~~~~~~~AkAmK~vDP~ikl~GPa~~g~~~y~ 233 (517)
T 3ik2_A 154 EFVNYLVNKYGSASGSKGIKGYSLDNEPSLWPSTHPLIHPDKTKCSEVLDKDTQLAQVVKKIDPAAETFGPALFGFSAFN 233 (517)
T ss_dssp HHHHHHHHHHCCTTSTTSCCEEEESSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTCEEEEEEECSHHHHH
T ss_pred HHHHHHHHhcCCCCCCCceeEEecCCCcccccccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCcEEEcchhhcccccc
Confidence 3456688899855 37889999999952 1136778888889999999999999655433221
Q ss_pred -CCCc-----------------chhhh----hcccCcCCCCCEEEEEeecCCCCCC----CCCCCCCcchh---------
Q 008330 253 -FDKD-----------------LSFVR----NQAVNLTFTGKLVFEAHWYGFTDGQ----AWVDGNPNQVC--------- 297 (570)
Q Consensus 253 -w~~d-----------------l~~~~----~~p~~l~~~~nlVys~H~Y~~~~~~----~w~~~~~~~~~--------- 297 (570)
|... |..++ .....| =-++++|+|+..... .+. ...+..+
T Consensus 234 ~~~~~~~w~~~~g~~~W~l~~~L~~mk~~~~~~g~RL----LD~ldiH~YP~~~~~~~~~~~~-~~t~~~~~~~rlq~~r 308 (517)
T 3ik2_A 234 DFNSSPDWSSVKGNYQWFIDYYLDNMKKNSDAAGKRL----LDALDLHWYPEAKGGGQRVTTS-DTSNVDCNKARMQAPR 308 (517)
T ss_dssp HTTTCTTHHHHHTTCSSHHHHHHHHHHHHHHHHTSCC----CSEEEEEECCCCEETTEETTCS-CTTCHHHHHHHHHGGG
T ss_pred ccccccccccccCCcchHHHHHHHHHHHhhccCCccc----cceeeeEeccCCCCCCcccccc-CcCCHHHHHHHhhhhh
Confidence 1110 01111 001111 138999999863210 010 0000000
Q ss_pred ---------hHHHH--------HHHHHHHHHHh--cCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCCceE-Eecc
Q 008330 298 ---------GRVVD--------NVMRLSGFLLE--QGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWA-LWTL 357 (570)
Q Consensus 298 ---------~~~~~--------~~~~~~g~l~~--~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gigw~-~W~~ 357 (570)
+.++. .+.+....+.+ -|.+|.|+||+.... .+..+.-+....+..+.++++.-+ +|++
T Consensus 309 sLwD~ty~e~SWI~~~~~~~~~lIpr~k~~Id~yyPgtkLaItEyn~~~~-~~i~~Ala~Ad~LGiF~r~gV~~At~w~~ 387 (517)
T 3ik2_A 309 SLWDSTYTEDSWIGQWCKWGLPLIPKVKSSIDKYYPGTKLSFSEYNYGGE-DHISGGIAQADALGVFGKYGVYFATYWEC 387 (517)
T ss_dssp GGTCTTCCCBSHHHHHCGGGCSHHHHHHHHHHHHSTTCEEEEEEECCSCT-TSHHHHHHHHHHHHHHHHTTEEEEEECCC
T ss_pred hhcCccccccccccccccchhhhHHHHHHHHHhhCCCCeEEEEecccCCC-cchHHHHHHHHHHHHHhhCceeEEEeeec
Confidence 01111 11111122212 678999999996544 334566788889999999998754 8886
Q ss_pred C
Q 008330 358 V 358 (570)
Q Consensus 358 ~ 358 (570)
.
T Consensus 388 ~ 388 (517)
T 3ik2_A 388 N 388 (517)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.069 Score=59.87 Aligned_cols=259 Identities=12% Similarity=0.002 Sum_probs=130.2
Q ss_pred EecCCeEE-cCCCCEEEEEEeeCCCCC--CccccCCCCCChHHHHHHHH----HHcCCcEEEecccccccccCccccchh
Q 008330 40 STNSRWIV-DENGHRVKLACVNWVSHL--EPVVAEGLSKQPMDMLSKRV----VDMGFNCVRLTWPLYLATNDSLASLTV 112 (570)
Q Consensus 40 ~t~G~~IV-d~~G~~v~L~GVNw~g~~--~~~v~~Gl~~~~~~~~~~~i----~~~GfN~VRlPi~~~~~~~~~~~n~tv 112 (570)
|.-|..|+ |.+.+--.+.|.-=.-.. .......+....-+++++.+ +.+|++.+|+||.-.-+..+...
T Consensus 10 ~~~~~~i~vd~~~~~Qti~GFG~s~t~~a~a~~l~~l~~~~r~~il~~lFs~~~Gigls~~R~~IG~~dfs~~~~~---- 85 (656)
T 3zr5_A 10 HIGGAYVLDDSDGLGREFDGIGAVSGGGATSRLLVNYPEPYRSEILDYLFKPNFGASLHILKVEIGGDGQTTDGTE---- 85 (656)
T ss_dssp ---CEEEECCTTCEEEECCEEEEEECSSCTTTTTTTCCTTHHHHHHHHHHSTTTSSCCSEEEEEECCSSBCSSSBC----
T ss_pred ccCCcEEEECCCCceeEEeEEEEeCCchHHHHHHHhCCHHHHHHHHHHHcCCCCCCeeEEEEEEecCCCccCCCCC----
Confidence 34455555 445555556665411100 11111223333446777777 35799999999965322111000
Q ss_pred hhhhhhccchhhccCcccCCCCCCCchH-HHHHHHHHHHHhcC--CCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHH
Q 008330 113 RQSFQKLGLLEAIGGIQSNNPSIVDLPL-IKAFQAVVASLGNN--NVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDL 189 (570)
Q Consensus 113 ~~s~~~lg~~~~~~g~~~~nP~~~~~t~-l~~ld~vV~~a~~~--Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~ 189 (570)
...| ....+ ..+ ....-.+++.|.++ +|+++..-.. +|.|-..+.. +... ..+.
T Consensus 86 ~~~f-------------~~~~d---~~~~~~~~i~~lk~A~~~~p~lki~aspWS-pP~WMK~n~~----l~~~--~y~~ 142 (656)
T 3zr5_A 86 PSHM-------------HYELD---ENYFRGYEWWLMKEAKKRNPDIILMGLPWS-FPGWLGKGFS----WPYV--NLQL 142 (656)
T ss_dssp CCSC-------------SSTTC---CCSCCSSHHHHHHHHHHHCTTCEEEEEESC-BCGGGGTTSS----CTTS--SHHH
T ss_pred CcCC-------------ccccc---cchhhchhHHHHHHHHHhCCCcEEEEecCC-CcHHhccCCC----CChH--HHHH
Confidence 0000 00111 011 01122344444444 4777777655 4577543211 2222 2577
Q ss_pred HHHHHHHHHHHh-CC-CCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCC-cEEEEeCCCCCCcchhhhhcccC
Q 008330 190 WIKGLTKMATIF-NG-VRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPE-VLVILSGLNFDKDLSFVRNQAVN 266 (570)
Q Consensus 190 ~~~~w~~iA~ry-k~-~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~-~lIiVeG~~w~~dl~~~~~~p~~ 266 (570)
|.+++.+..+.| +. -=.|-++.+.|||... .+|. +.+..++++.+.+ .-|++...+|+.-...+...|-.
T Consensus 143 yA~Ylvk~i~~y~~~~GI~i~~Is~qNEP~~~----~~fi---k~L~p~L~~~gl~~~kI~~~D~n~~~~~~~il~d~~a 215 (656)
T 3zr5_A 143 TAYYVVRWILGAKHYHDLDIDYIGIWNERPFD----ANYI---KELRKMLDYQGLQRVRIIASDNLWEPISSSLLLDQEL 215 (656)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCEECSCTTSCCC----HHHH---HHHHHHHHHTTCTTCEEEEEEECSTTHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHhcCCceEEEeeccCCCcc----ccHH---HHHHHHHHHcCCCccEEEEcCCCchHHHHHHhcCHhH
Confidence 888888877775 32 2356789999999753 3554 4567888888886 55666555676411111111100
Q ss_pred cCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHH
Q 008330 267 LTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAA 346 (570)
Q Consensus 267 l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~ 346 (570)
. .---+..+| |.-... . .. ....+.+++.+|.+...+. ......|.+.+..-+.
T Consensus 216 ~--~~v~gia~H-Y~g~~~--------~----~~----------~~~p~k~lw~TE~~~~~~~-~~g~g~wa~~i~~~~~ 269 (656)
T 3zr5_A 216 W--KVVDVIGAH-YPGTYT--------V----WN----------AKMSGKKLWSSEDFSTINS-NVGAGCWSRILNQNYI 269 (656)
T ss_dssp H--HHCCEEEEE-SCTTCC--------C----HH----------HHHHTCEEEEEEEECSCTT-HHHHHHHHHHHHHHHH
T ss_pred H--hhccEEEEE-CCCCCc--------c----hH----------hhCCCCceEEEccccCCCC-CCCccHHHHHHHHHHH
Confidence 0 012367999 643211 0 00 1125689999998864321 1112356555544333
Q ss_pred HCC-CceEEeccC
Q 008330 347 ELD-WDWALWTLV 358 (570)
Q Consensus 347 ~~g-igw~~W~~~ 358 (570)
..+ -+|.+|.+-
T Consensus 270 ~~~~~a~i~Wnl~ 282 (656)
T 3zr5_A 270 NGNMTSTIAWNLV 282 (656)
T ss_dssp HHCCCEEEEECSE
T ss_pred hCCceEEEEEeee
Confidence 444 479999975
|
| >2vx5_A Cellvibrio japonicus mannanase cjman26C; hydrolase; HET: BMA; 1.47A {Cellvibrio japonicus} PDB: 2vx4_A* 2vx6_A* 2vx7_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.33 Score=50.99 Aligned_cols=194 Identities=10% Similarity=0.069 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCC---------CCHHHHHHHHHHHHHHhCCCC------
Q 008330 141 IKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQY---------FNPDLWIKGLTKMATIFNGVR------ 205 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~---------~~~~~~~~~w~~iA~ryk~~p------ 205 (570)
++.+.+.+.++.++|-.|.|..|...|. .+...|.+.. ...+.+.+.+++||+..+.-.
T Consensus 111 ~~~~~~~~~~~~~~Ggi~~isWh~~~p~------~~~~~~~~~~~~~~i~~Gg~~~~~~~~~id~iA~~l~~L~~~~~~G 184 (396)
T 2vx5_A 111 FEKMQHWIKAGYSRGGVITISWHVFNPV------SGGNSWDKTPAVHELIPGGARHATLKAYLDTFVAFNEGLADVDAQG 184 (396)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCCCTT------TSCCTTCCCCCHHHHSTTSTTHHHHHHHHHHHHHHHHTTCEECTTS
T ss_pred hHHHHHHHHHHHHCCCeEEEEEeeCCCC------CCCCCcCchHHHHHHhCCChhHHHHHHHHHHHHHHHHHhhhhhccC
Confidence 5566666777788899999999986542 0111222110 012456777888888765431
Q ss_pred -----cEEEEeccCCCCCCCC-------ChhHHHHHHHHHHHHHH-hcCCCcEEEEeCCCCC-----Cc-chhhhhcccC
Q 008330 206 -----NVVGMSLRNELRGPKQ-------NVKDWYRYMQLGAEAVH-AANPEVLVILSGLNFD-----KD-LSFVRNQAVN 266 (570)
Q Consensus 206 -----~Vig~dL~NEP~~~~~-------~~~~W~~~~~~~~~aIr-~~dp~~lIiVeG~~w~-----~d-l~~~~~~p~~ 266 (570)
.|+ +-+..|..+.+- +.+++.+..+.+++++| ...-+.+|+|=.++-. .+ -.....+|
T Consensus 185 ~~v~~PV~-~Rp~HE~nG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwvwsp~~~~~~~~~~~~~~~~~YP-- 261 (396)
T 2vx5_A 185 NKHYPPII-FRPWHEHNGDWFWWGKGHASEQDYIALWRFTVHYLRDEKKLRNLIYAYSPDRSRIDMANFEAGYLYGYP-- 261 (396)
T ss_dssp CEECCCEE-EECSCSTTSSSSTTSBTTBCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBGGGSCGGGHHHHHTTTCC--
T ss_pred CccCCCEE-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhhcCCCcEEEEEcCCCCccccCCCccchhhcCC--
Confidence 345 999999988641 46889999999999999 4455778877333211 00 00111122
Q ss_pred cCCCC-CEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHH
Q 008330 267 LTFTG-KLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVA 345 (570)
Q Consensus 267 l~~~~-nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~ 345 (570)
-|+ =-|+.+-.|.......+ ........+.+...+.....+....+.|+.|+|+|....+ + ...|.+.+++.+
T Consensus 262 --GDdyVDivG~D~Y~~~~~~~~-~~~~~~f~~~~~~~~~~l~~~a~~~~Kpial~E~G~~~~~-d--~~~w~~~l~~~~ 335 (396)
T 2vx5_A 262 --GDAYVDIIGLDNYWDVGHEAN-TASADEQKAALTASLKQLVQIARSKGKIAALTETGNNRLT-I--DNFWTERLLGPI 335 (396)
T ss_dssp --CGGGCSEEEEECCGGGTCTTC-CSCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEECCTTCC-S--TTHHHHTTHHHH
T ss_pred --CCceEEEEEEeccCCCCCCcc-ccchhhHHHHHHHHHHHHHHHhhcCCCeEEEEeecCCCCC-c--hHHHHHHHHHHH
Confidence 111 13567777754221110 0000011112222233222333347999999999986542 2 346777788888
Q ss_pred HHCC
Q 008330 346 AELD 349 (570)
Q Consensus 346 ~~~g 349 (570)
+++.
T Consensus 336 ~~~~ 339 (396)
T 2vx5_A 336 SADA 339 (396)
T ss_dssp HTST
T ss_pred HhCc
Confidence 8876
|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* | Back alignment and structure |
|---|
Probab=95.95 E-value=0.0039 Score=67.58 Aligned_cols=68 Identities=16% Similarity=0.427 Sum_probs=52.8
Q ss_pred CceeeeecCC--CCceecCCCCC---CCCccccC-CcceeecccceEEeecc-CCccceeccccC-CCCCceeEeec
Q 008330 419 TGLCVQRKSF--LDPLTLGPCTE---SEAWSYTP-HKTISLKGAYFCLQAKH-VGKPAKLGIICT-DCGSTWEIISD 487 (570)
Q Consensus 419 tg~c~~~~~~--~~~~~~~~c~~---~~~W~~~~-~~~~~~~~~~~cl~a~~-~g~~~~~~~~c~-~~~~~W~~~s~ 487 (570)
+++|+++.+. ..++.+++|.+ +|+|.++. ++.|.-..+++||++.. .|..+.+ ..|+ +++|+|++..+
T Consensus 423 ~~~Cld~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~i~~~~sg~CLd~~~~~~~~~~~-~~C~~~~~Q~W~~~~~ 498 (501)
T 2ffu_A 423 MDLCLTVVDRAPGSLIKLQGCRENDSRQKWEQIEGNSKLRHVGSNLCLDSRTAKSGGLSV-EVCGPALSQQWKFTLN 498 (501)
T ss_dssp TTEEEECSCCSTTCBCEEEECCTTCGGGCEEEETTTTEEEETTSSEEEECTTGGGTSCEE-EECCSCGGGCCEEEEC
T ss_pred ccccceeccCCCCCeEEEEecCCCCcCceEEEECCCCeEEeCCCCeEEeeecCCCCeEEE-EeCCCCCcceEEEeCC
Confidence 6899998532 35699999987 37999997 66777678999999874 3555666 8898 77899998554
|
| >3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* | Back alignment and structure |
|---|
Probab=95.94 E-value=0.0047 Score=69.00 Aligned_cols=65 Identities=20% Similarity=0.441 Sum_probs=52.3
Q ss_pred CceeeeecCC----CCceecCCCCCC--CCccccCCcceeecccceEEeeccC----CccceeccccC-CCCCceeE
Q 008330 419 TGLCVQRKSF----LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKHV----GKPAKLGIICT-DCGSTWEI 484 (570)
Q Consensus 419 tg~c~~~~~~----~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~~----g~~~~~~~~c~-~~~~~W~~ 484 (570)
+|+|+++.+. ..++.+++|.++ |+|.++.++.|+-+.+++||++.+. |..+.+ +.|. +++|+|++
T Consensus 538 ~~~CLdv~~~~~~~G~~V~l~~C~g~~nQ~W~~~~~g~i~~~~sg~CLdv~~~st~~g~~v~~-~~C~g~~~Q~W~~ 613 (614)
T 3a21_A 538 GNKCLDAYNLGTTNGTKVVIWDCNGQANQKWNINSDGTITNVNAGLCLDAYNAATANGTSLVL-WSCGTGDNQKWTV 613 (614)
T ss_dssp TTEEEEEGGGCCSTTCBEEEEECCCCGGGCEEECTTSCEEETTTCCEEEEGGGCCSTTCBEEE-ECCCSCGGGCEEC
T ss_pred CCcEEECCCCcCCCCceEEEeCCCCCCccEEEEcCCCeEEECCCCceEecCCCCCCCCCEEEE-EcCCCCcccEEee
Confidence 5899999531 356999999985 7999998888877789999999863 555555 8999 77899985
|
| >1ybi_A HA33A, HA33/A, non-toxin haemagglutinin HA34; beta-trefoil; 1.50A {Clostridium botulinum} | Back alignment and structure |
|---|
Probab=95.90 E-value=0.017 Score=58.23 Aligned_cols=107 Identities=13% Similarity=0.014 Sum_probs=70.8
Q ss_pred ceeeCC-CCceeeeecCCCCceecCCCCCC--CCccccC-------Ccc--eeecc-cceEEeecc-CCccceeccccC-
Q 008330 412 KVIYHP-ATGLCVQRKSFLDPLTLGPCTES--EAWSYTP-------HKT--ISLKG-AYFCLQAKH-VGKPAKLGIICT- 476 (570)
Q Consensus 412 ~~~~~~-~tg~c~~~~~~~~~~~~~~c~~~--~~W~~~~-------~~~--~~~~~-~~~cl~a~~-~g~~~~~~~~c~- 476 (570)
+++... .+|+|+++......+.++.++++ ++|...+ ++. |+-+. +++||+..+ .|.++.+ ++|.
T Consensus 101 y~I~n~~~s~~vLdv~t~~g~v~~~~~ngs~~Q~w~i~~~~~~~~~~G~y~I~~~~s~~~vldv~~~~g~~v~~-w~~~g 179 (288)
T 1ybi_A 101 FIIASYKNPNLVLYADTVARNLKLSTLNNSNYIKFIIEDYIISDLNNFTCKISPILDLNKVVQQVDVTNLNVNL-YTWDY 179 (288)
T ss_dssp EEEEESSCTTCEEEEETTTTEEEEECCCSSGGGCEEEEEHHHHHHTTCEEEEEETTCTTEEEEESSSSCCBEEE-EECCC
T ss_pred EEEEECCCCCeeEEEECCCCcEEEeCCCCCcCceEEEccccccCCCCceEEEEEccCCCeEEEeeCCCCCEEEE-ecCCC
Confidence 444444 47888888521126889998876 6999873 343 33333 459999976 5676666 8898
Q ss_pred CCCCceeEeeccc-cEEEEecCCCceEEEeecC-CCcee-ecceee
Q 008330 477 DCGSTWEIISDSK-MHLSSKADNGTTVCLDVDS-SNTIV-TNTCKC 519 (570)
Q Consensus 477 ~~~~~W~~~s~~~-~~~~~~~~~~~~~cld~~~-~~~~~-~~~c~c 519 (570)
..+|+|++..++. .....+...++.+|||+.+ +|..| ...|.+
T Consensus 180 ~~nQ~W~~~~~~~~~~Y~i~~~~~s~~~L~~~~~~G~~v~~~~~~~ 225 (288)
T 1ybi_A 180 GRNQKWTIRYNEEKAAYQFFNTILSNGVLTWIFSNGNTVRVSSSND 225 (288)
T ss_dssp CGGGCEEEEEETTTTEEEEEETTSSSEEEEECGGGTTBEEEEECCC
T ss_pred CccCEEEEEEccCCCeEEEEeccCCceEEEecCCCCCEEEEEecCC
Confidence 7789999987653 3333333346789999964 56555 577754
|
| >2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A* | Back alignment and structure |
|---|
Probab=95.74 E-value=0.056 Score=59.08 Aligned_cols=103 Identities=13% Similarity=0.035 Sum_probs=65.7
Q ss_pred HHHHHHHHhcCCCEEEEecCCC-------CC-----------Ccc--ccCCCCCCCCCCCCC--CHHHHHHHHHHHHHHh
Q 008330 144 FQAVVASLGNNNVMVILDNHIS-------KP-----------GWC--CSNSDGNGFFGDQYF--NPDLWIKGLTKMATIF 201 (570)
Q Consensus 144 ld~vV~~a~~~Gl~VILD~H~~-------~~-----------~w~--~~~~dgng~~~d~~~--~~~~~~~~w~~iA~ry 201 (570)
+++.+++|++.|...|+-+... .+ .|. |... ..++-..... ......++|+.+-.+|
T Consensus 92 ~~ef~~~~~~~g~e~m~~vnl~~~v~~~~~~~~~e~~~~~~~~w~e~~n~~-~~~~~~~p~~~~g~~~~~~~~~~lr~~~ 170 (524)
T 2yih_A 92 VTSFHDQSLKLGTYSLVTLPMAGYVAADGNGSVQESEAAPSARWNQVVNAK-NAPFQLQPDLNDNYVYVDEFVHFLVNKY 170 (524)
T ss_dssp HHHHHHHHHHHTCEEEEEECCSSEEECCCCEECCGGGCSSSTTEEEEESCC-CSCCCSSCCSSSSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEEecCcccccccCcChhHhhcCcccchhhhhccc-cCcccccCCCCCcchhHHHHHHHHHHHc
Confidence 8999999999999999877652 11 121 1100 0000000000 0011235567788888
Q ss_pred CCC--C-cEEEEeccCCCCCCCC-----------ChhHHHHHHHHHHHHHHhcCCCcEEEE
Q 008330 202 NGV--R-NVVGMSLRNELRGPKQ-----------NVKDWYRYMQLGAEAVHAANPEVLVIL 248 (570)
Q Consensus 202 k~~--p-~Vig~dL~NEP~~~~~-----------~~~~W~~~~~~~~~aIr~~dp~~lIiV 248 (570)
... | +|-.++|-|||.+ ++ +.+++.+.+.+.++|||++||+.-|+.
T Consensus 171 G~~~~p~gVk~W~LgNE~dg-Wq~gh~~~~p~~~t~~ey~~~~~e~AkamK~vDP~i~l~g 230 (524)
T 2yih_A 171 GTASTKAGVKGYALDNEPAL-WSHTHPRIHPEKVGAKELVDRSVSLSKAVKAIDAGAEVFG 230 (524)
T ss_dssp CCTTSTTSCCEEEECSCGGG-HHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCCCCCeeEEEecccccc-ccccccccCCCCCCHHHHHHHHHHHHHHHHHhCCCcEEEe
Confidence 543 2 4767899999976 31 577888888999999999999977664
|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=95.50 E-value=0.28 Score=54.22 Aligned_cols=142 Identities=17% Similarity=0.203 Sum_probs=81.0
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|||+|=| |+.... .+..|. ....+..+|.+.. .+.|+++|++|.++||
T Consensus 174 i~~~LdyLk~LGvt~I~L~Pi~~~~-~~~GYd----------------~~dy~~idp~~Gt---~~df~~lv~~~H~~Gi 233 (583)
T 1ea9_C 174 VIDHLDHLSKLGVNAVYFTPLFKAT-TNHKYD----------------TEDYFQIDPQFGD---KDTLKKLVDLCHERGI 233 (583)
T ss_dssp HHHTHHHHHHHTCSEEEECCCSSCS-SSSTTS----------------CSCTTCCCTTTCC---HHHHHHHHHHHTTTTC
T ss_pred HHHhhHHHHHcCCCEEEECCCccCC-CCCCcC----------------cccccccCcccCC---HHHHHHHHHHHHHCCC
Confidence 445578999999999998 553211 111121 0122455676643 5789999999999999
Q ss_pred EEEEec---CCCCC-----------------CccccCC-----C---CC--CCCCC-----CCC-CH---HHHHHHHHHH
Q 008330 157 MVILDN---HISKP-----------------GWCCSNS-----D---GN--GFFGD-----QYF-NP---DLWIKGLTKM 197 (570)
Q Consensus 157 ~VILD~---H~~~~-----------------~w~~~~~-----d---gn--g~~~d-----~~~-~~---~~~~~~w~~i 197 (570)
+||||+ |.... .|..-.. + ++ .|+.. -.+ ++ +..++..+..
T Consensus 234 ~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~~p~Vr~~l~~~~~~W 313 (583)
T 1ea9_C 234 RVLLDAVFNHSGRTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYW 313 (583)
T ss_dssp EEEEECCCSBCCTTTHHHHHHHTTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHH
T ss_pred EEEEEEccccCCCccHHHHHHHhcCCCCCccCceEecCCCCCCCCCCCCceecCCCCCcceeccCCHHHHHHHHHHHHHH
Confidence 999995 65421 1211000 0 01 12211 011 12 2223333334
Q ss_pred HHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 198 ATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 198 A~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
++.| +-...= +|..|+.. . .+++++.++|++.+|+.+++-|.
T Consensus 314 ~~~~-gvDGfR-~D~~~~~~-----~----~f~~~~~~~v~~~~p~~~~igE~ 355 (583)
T 1ea9_C 314 IRET-GIDGWR-LDVANEVS-----H----QFWREFRRVVKQANPDAYILGEV 355 (583)
T ss_dssp HHHH-CCSEEE-ETTCTTSC-----H----HHHHHHHHHHHHHCTTCEEEECC
T ss_pred HHhc-CceEEE-ecccccCC-----H----HHHHHHHHHHHhhCCCeEEEEEE
Confidence 4443 444554 78888752 2 24456667888899999988886
|
| >1odz_A Mannanase A; hydrolase, family 26, glycoside-hydrolase, glycosynthase, manno-oligosaccharide; HET: MAN BMA; 1.4A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1r7o_A* 2whm_A* 1j9y_A 1gvy_A* 1gw1_A* | Back alignment and structure |
|---|
Probab=95.33 E-value=0.46 Score=49.75 Aligned_cols=189 Identities=12% Similarity=0.083 Sum_probs=105.4
Q ss_pred HHHHHhcCCCEEEEecCCCCCCccccCCC----CCCCCCCCC---------CCHHHHHHHHHHHHHHhCCC-------Cc
Q 008330 147 VVASLGNNNVMVILDNHISKPGWCCSNSD----GNGFFGDQY---------FNPDLWIKGLTKMATIFNGV-------RN 206 (570)
Q Consensus 147 vV~~a~~~Gl~VILD~H~~~~~w~~~~~d----gng~~~d~~---------~~~~~~~~~w~~iA~ryk~~-------p~ 206 (570)
.+..+.++|-.|.|..|...|.- +... ...+|.+.. ..-+.+.+.+++||+..+.- -.
T Consensus 90 ~~~~~~~~GgIvt~sWH~~~P~~--~~~~~~~~~~~~~d~~~~~~~il~gg~~~~~~~~~id~iA~~l~~l~~~~G~~vP 167 (386)
T 1odz_A 90 QVKKAYARGGIITVSSHFDNPKT--DTQKGVWPVGTSWDQTPAVVDSLPGGAYNPVLNGYLDQVAEWANNLKDEQGRLIP 167 (386)
T ss_dssp HHHHHHHTTCEEEEECCCCCTTT--GGGCSSTTTTSTTCCSCCSTTTSTTSTTHHHHHHHHHHHHHHHHTCBCTTSCBCC
T ss_pred HHHHHHHCCCeEEEEEeeCCCCc--CccccccccCCCccchHHHHHHcCCchhHHHHHHHHHHHHHHHHHhhhccCCCce
Confidence 33344567778999999876521 1000 012332110 11246777888888876643 23
Q ss_pred EEEEeccCCCCCCC-----C--ChhHHHHHHHHHHHHHH-hcCCCcEEEEeCCCCC--Cc-chhhhhcccCcCCCC-CEE
Q 008330 207 VVGMSLRNELRGPK-----Q--NVKDWYRYMQLGAEAVH-AANPEVLVILSGLNFD--KD-LSFVRNQAVNLTFTG-KLV 274 (570)
Q Consensus 207 Vig~dL~NEP~~~~-----~--~~~~W~~~~~~~~~aIr-~~dp~~lIiVeG~~w~--~d-l~~~~~~p~~l~~~~-nlV 274 (570)
|+ +-+..|..+.+ . +.+++.+..+.+++++| ...-+.+|+|=.++-. .+ -....-+| -++ =-|
T Consensus 168 V~-~Rp~HE~nG~WfwWg~~~~~p~~yk~lwr~~~d~~r~~~g~~Nliwvwsp~~~~~~~~~~~~~~YP----GDdyVDi 242 (386)
T 1odz_A 168 VI-FRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPNNFWDVTEANYLERYP----GDEWVDV 242 (386)
T ss_dssp EE-EECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBCCSSCCHHHHHSSCC----CTTTCSE
T ss_pred EE-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCccchhhcCC----CCCeEEE
Confidence 55 99999998763 1 36889999999999999 5566778877333211 11 11111222 111 124
Q ss_pred EEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCC--CCcchHHHHHHHHHHHHHCC
Q 008330 275 FEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRG--NNVNDNRYLNCFFGVAAELD 349 (570)
Q Consensus 275 ys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~--~~~~~~~~~~~~~~~~~~~g 349 (570)
+.+-.|.....+ ....+.+...+.....+....+.|+.|+|+|....+ ....+..|++.+++.++++.
T Consensus 243 vG~D~Y~~~~~~-------~~f~~~~~~~l~~~~~~A~~~~Kpial~E~G~~~~~p~~G~~d~~W~~~l~~~l~~~p 312 (386)
T 1odz_A 243 LGFDTYGPVADN-------ADWFRNVVANAALVARMAEARGKIPVISGIGIRAPDIEAGLYDNQWYRKLISGLKADP 312 (386)
T ss_dssp ECCEEEECSSSC-------HHHHHHHHHHHHHHHHHHHHHTCEECBCEEEECHHHHHTTCCCTTHHHHHHHHHHHST
T ss_pred EEEeccCCCCCC-------ccHHHHHHHHHHHHHHHhhcCCCeEEEEeccCCCCCccccccchHHHHHHHHHHHhCc
Confidence 555555432210 011122222222222333458999999999985431 01125688888999998876
|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=95.13 E-value=0.18 Score=57.18 Aligned_cols=150 Identities=19% Similarity=0.314 Sum_probs=80.1
Q ss_pred HHHHHHHHHcCCcEEEe-ccccccccc-CccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 79 DMLSKRVVDMGFNCVRL-TWPLYLATN-DSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRl-Pi~~~~~~~-~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+++++.|+++|||+|-| |+....... -.|. ..+.+..+|.+.. .+.|+++|++|.++||
T Consensus 267 ~~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~----------------~~~y~a~~~~yGt---~~dfk~lV~~~H~~GI 327 (722)
T 3k1d_A 267 RELTDYIVDQGFTHVELLPVAEHPFAGSWGYQ----------------VTSYYAPTSRFGT---PDDFRALVDALHQAGI 327 (722)
T ss_dssp HHHHHHHHHHTCSEEEESCCEECSCGGGTTCS----------------CSEEEEECGGGCC---HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCeEEECCcccCCCCCCCCCC----------------cccCcCccccCCC---HHHHHHHHHHHHHcCC
Confidence 34458899999999998 554321110 0010 0011233444432 5789999999999999
Q ss_pred EEEEec---CCCCCCccccCCCCC-------------CCCCCCCCC---HH---HHHHHHHHHHHHhCCCCcEEEEecc-
Q 008330 157 MVILDN---HISKPGWCCSNSDGN-------------GFFGDQYFN---PD---LWIKGLTKMATIFNGVRNVVGMSLR- 213 (570)
Q Consensus 157 ~VILD~---H~~~~~w~~~~~dgn-------------g~~~d~~~~---~~---~~~~~w~~iA~ryk~~p~Vig~dL~- 213 (570)
.||||+ |.....|.-...++. ..|+...++ ++ ..++.....+++|. ...+- +|..
T Consensus 328 ~VilD~V~NH~~~~~~~~~~fdg~~~y~~~d~~~~~~~~Wg~~~ln~~~p~Vr~~l~~~~~~Wl~~~g-vDGfR-~Dav~ 405 (722)
T 3k1d_A 328 GVIVDWVPAHFPKDAWALGRFDGTPLYEHSDPKRGEQLDWGTYVFDFGRPEVRNFLVANALYWLQEFH-IDGLR-VDAVA 405 (722)
T ss_dssp EEEEEECTTCCCCCTTTTTTTTSSCCSBCCCCCSSSTTCCCCCCBCTTSHHHHHHHHHHHHHHHHHSC-CCEEE-ECCTH
T ss_pred EEEEEEEeeccCCccchhhcCCCCcccccCCcccCccCCCCCeeecCCCHHHHHHHHHHHHHHHHHhC-CCEEE-Ecchh
Confidence 999994 765544432221221 223322222 22 22333344444432 22222 4431
Q ss_pred ---------C------CCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 214 ---------N------ELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 214 ---------N------EP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
+ +..+...+. +=..+++++.++|++..|+.++|-|.
T Consensus 406 ~mly~d~~r~~g~w~~n~~gg~~n~-~~~~fl~~l~~~v~~~~P~~~~iaE~ 456 (722)
T 3k1d_A 406 SMLYLDYSRPEGGWTPNVHGGRENL-EAVQFLQEMNATAHKVAPGIVTIAEE 456 (722)
T ss_dssp HHHBCCCCCCSSCCSCCCSSCSBCH-HHHHHHHHHHHHHHHHSTTCEEEECC
T ss_pred hhhhccccccccccccccCCCccCh-HHHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 0 111111122 22356678889999999999999884
|
| >3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A* | Back alignment and structure |
|---|
Probab=94.80 E-value=0.064 Score=56.62 Aligned_cols=188 Identities=15% Similarity=0.133 Sum_probs=97.6
Q ss_pred HHHHHHhcCCCEEEEecCCCCCCccccCCCCC-----CCCCCCCCCHHHHHHHHHHHHHHhCCC-CcEEEEeccCCCCCC
Q 008330 146 AVVASLGNNNVMVILDNHISKPGWCCSNSDGN-----GFFGDQYFNPDLWIKGLTKMATIFNGV-RNVVGMSLRNELRGP 219 (570)
Q Consensus 146 ~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgn-----g~~~d~~~~~~~~~~~w~~iA~ryk~~-p~Vig~dL~NEP~~~ 219 (570)
.+++.|.+.||+++...... |.|-......+ +-.... ..+.|.+++.+.++.|+.+ =.+-++.+.|||...
T Consensus 68 ~~~k~A~~~~~~i~aspWsp-P~WMk~~~~~~g~~~~g~L~~~--~y~~yA~Y~~k~i~~y~~~Gi~i~~is~qNEP~~~ 144 (401)
T 3kl0_A 68 ETAKSAVKHGAIVFASPWNP-PSDMVETFNRNGDTSAKRLKYN--KYAAYAQHLNDFVTFMKNNGVNLYAISVQNEPDYA 144 (401)
T ss_dssp HHHHHHHHTTCEEEEEESCC-CGGGEEEEEETTEEEEEEECGG--GHHHHHHHHHHHHHHHHHTTCCCSEEESCSCTTSC
T ss_pred HHHHHHHhCCCEEEEecCCC-CHHhccCCCcCCCccCCcCChH--HHHHHHHHHHHHHHHHHHCCCCeEEEeeecccCCC
Confidence 46777788999988887765 56743211101 111111 2478888888888888765 246688999999753
Q ss_pred CCChhHHHHHHHHHHHHHHh-cCC--CcEEEEeCCCCCCcch-hhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcc
Q 008330 220 KQNVKDWYRYMQLGAEAVHA-ANP--EVLVILSGLNFDKDLS-FVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQ 295 (570)
Q Consensus 220 ~~~~~~W~~~~~~~~~aIr~-~dp--~~lIiVeG~~w~~dl~-~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~ 295 (570)
. ....|.. ++..+.|+. ..| ..++.-+...|..+.. .+-..|.... .=-+..+|+|+-... ....
T Consensus 145 ~-~~~~~t~--~~~~~fi~~~lg~~~tkI~~~d~~~~~~~~~~~il~D~~a~~--~v~gia~H~Y~~~~~-----~l~~- 213 (401)
T 3kl0_A 145 H-EWTWWTP--QEILRFMRENAGSINARVIAPESFQYLKNLSDPILNDPQALA--NMDILGTHLYGTQVS-----QFPY- 213 (401)
T ss_dssp T-TSCCCCH--HHHHHHHHHTGGGCSSEEEEEEESSCCHHHHHHHHTCHHHHH--TCSEEEEECTTCCGG-----GSCC-
T ss_pred C-CCCCCCH--HHHHHHHHHhccccCceEEecchhhhhhhhhHHHhcCHhHHh--hCcEEEEEcCCCCcc-----cccc-
Confidence 2 1111211 333444543 223 2333334444432211 1111221111 112569999974321 0000
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCC----Ccc-hHHHHHHHHHHHHHCCC-ceEEeccC
Q 008330 296 VCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGN----NVN-DNRYLNCFFGVAAELDW-DWALWTLV 358 (570)
Q Consensus 296 ~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~----~~~-~~~~~~~~~~~~~~~gi-gw~~W~~~ 358 (570)
+ .+. ....+.+++.+|.+....+. ... ...|.+.+...+....+ +|.+|.+.
T Consensus 214 -~-----~~~-----~~~~~K~lw~TE~~~~~~~~~~~~~w~~al~~a~~I~~~l~~~~~~a~v~Wnl~ 271 (401)
T 3kl0_A 214 -P-----LFK-----QKGAGKDLWMTEVYYPNSDTNSADRWPEALDVSQHIHNAMVEGDFQAYVWWYIR 271 (401)
T ss_dssp -H-----HHH-----HHCTTCEEEEEEECCSCCCTTCTTCTTTTHHHHHHHHHHHHTSCCSEEEEEESB
T ss_pred -h-----hHH-----hhCCCCeEEEEecccCCCCCccccchhHHHHHHHHHHHHHHhccCcEEEEcccc
Confidence 0 011 11257899999987643221 111 24677777777766554 69999863
|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
Probab=94.67 E-value=0.31 Score=53.96 Aligned_cols=73 Identities=15% Similarity=0.072 Sum_probs=45.9
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|||+|=| |+........+|-...+ ...+..+|.+.. .+.|+++|++|.++||
T Consensus 150 i~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~-------------~dy~~idp~~Gt---~~df~~Lv~~aH~~Gi 213 (601)
T 3edf_A 150 TIDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAA-------------TDHYRIDPRYGS---NEDFVRLSTEARKRGM 213 (601)
T ss_dssp HHHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSC-------------SEEEEECTTTCC---HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCc-------------cccccccccCCC---HHHHHHHHHHHHHcCC
Confidence 456688899999999999 54321100000000000 011345777653 4679999999999999
Q ss_pred EEEEec---CCCC
Q 008330 157 MVILDN---HISK 166 (570)
Q Consensus 157 ~VILD~---H~~~ 166 (570)
+||||+ |...
T Consensus 214 ~VilD~V~NH~~~ 226 (601)
T 3edf_A 214 GLIQDVVLSHIGK 226 (601)
T ss_dssp EEEEEECCSBCCT
T ss_pred EEEEEECCcccCC
Confidence 999994 6543
|
| >1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* | Back alignment and structure |
|---|
Probab=94.26 E-value=0.47 Score=52.75 Aligned_cols=67 Identities=18% Similarity=0.163 Sum_probs=43.3
Q ss_pred HHHHHHHHcCCcEEEe-ccccccccc-CccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 80 MLSKRVVDMGFNCVRL-TWPLYLATN-DSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 80 ~~~~~i~~~GfN~VRl-Pi~~~~~~~-~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++.|+++|+|+|=| |+....... -.|.. ...+..+|.+.. .+.|+++|++|.++||+
T Consensus 160 ~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~----------------~~y~~~~~~~Gt---~~~~~~lv~~~H~~Gi~ 220 (617)
T 1m7x_A 160 QLVPYAKWMGFTHLELLPINEHPFDGSWGYQP----------------TGLYAPTRRFGT---RDDFRYFIDAAHAAGLN 220 (617)
T ss_dssp HHHHHHHHTTCSEEEESCCEECSCGGGTTSSC----------------SEEEEECGGGSC---HHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEecccccCCCCCCCCccc----------------ccCCccCccCCC---HHHHHHHHHHHHHCCCE
Confidence 3458899999999999 554321100 01110 011234555432 67899999999999999
Q ss_pred EEEe---cCCC
Q 008330 158 VILD---NHIS 165 (570)
Q Consensus 158 VILD---~H~~ 165 (570)
|||| +|..
T Consensus 221 VilD~V~NH~~ 231 (617)
T 1m7x_A 221 VILDWVPGHFP 231 (617)
T ss_dssp EEEEECTTSCC
T ss_pred EEEEEecCccc
Confidence 9999 4763
|
| >4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... | Back alignment and structure |
|---|
Probab=94.14 E-value=0.055 Score=57.66 Aligned_cols=89 Identities=13% Similarity=0.124 Sum_probs=55.6
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGI 128 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~ 128 (570)
+|+.+.|+...|. |..-.++..+.|+++||++|=| |+.........+ .++.... -+..
T Consensus 8 ~g~~~i~~~f~W~-----------w~~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~-----~~~~~~Y-----~~~d 66 (496)
T 4gqr_A 8 QGRTSIVHLFEWR-----------WVDIALECERYLAPKGFGGVQVSPPNENVAIYNPF-----RPWWERY-----QPVS 66 (496)
T ss_dssp TTCCEEEEETTCC-----------HHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTT-----SCGGGGG-----SBSC
T ss_pred CCCcEEEEecCCC-----------HHHHHHHHHHHHHHhCCCEEEeCccccCccCCCCC-----CCccccc-----CccC
Confidence 6788889999882 2222345556799999999999 454322111000 0111000 0122
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEec
Q 008330 129 QSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDN 162 (570)
Q Consensus 129 ~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~ 162 (570)
|..+|.+-. .+-|+++|++|.++||+||||+
T Consensus 67 y~i~~~~Gt---~~df~~lv~~aH~~Gi~VilD~ 97 (496)
T 4gqr_A 67 YKLCTRSGN---EDEFRNMVTRCNNVGVRIYVDA 97 (496)
T ss_dssp SCSCBTTBC---HHHHHHHHHHHHHTTCEEEEEE
T ss_pred ceeCCCCCC---HHHHHHHHHHHHHCCCEEEEEE
Confidence 455666543 4679999999999999999994
|
| >2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A | Back alignment and structure |
|---|
Probab=94.12 E-value=0.42 Score=50.60 Aligned_cols=131 Identities=15% Similarity=0.192 Sum_probs=73.4
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|=| |+.... ..+ |. + ...+..+|.+.. ++-|+++|++|.++||
T Consensus 38 i~~~Ldyl~~LGv~~i~l~Pi~~~~-~~~-y~---~-------------~dy~~idp~~Gt---~~d~~~lv~~ah~~Gi 96 (424)
T 2dh2_A 38 LKGRLDYLSSLKVKGLVLGPIHKNQ-KDD-VA---Q-------------TDLLQIDPNFGS---KEDFDSLLQSAKKKSI 96 (424)
T ss_dssp HHTTHHHHHHTTCSEEEECCCEEEC-TTC-ST---T-------------EEEEEECGGGCC---HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCC-CCC-CC---c-------------ccccccCccCCC---HHHHHHHHHHHHHCCC
Confidence 445578999999999999 443211 110 11 0 011344665542 6789999999999999
Q ss_pred EEEEec---CCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--CCCCcEEEEeccCCCCCCCCChhHHHHHHH
Q 008330 157 MVILDN---HISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIF--NGVRNVVGMSLRNELRGPKQNVKDWYRYMQ 231 (570)
Q Consensus 157 ~VILD~---H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ry--k~~p~Vig~dL~NEP~~~~~~~~~W~~~~~ 231 (570)
+||||+ |.. ...||..+ ++...+....++... ++-...= +|.++.-. ...+ +++
T Consensus 97 ~vilD~V~NH~s----------~~~wF~~q---~~~Vr~~~~~~~~~Wl~~gvDGfR-lD~v~~~~----~~~~---~~~ 155 (424)
T 2dh2_A 97 RVILDLTPNYRG----------ENSWFSTQ---VDTVATKVKDALEFWLQAGVDGFQ-VRDIENLK----DASS---FLA 155 (424)
T ss_dssp EEEEECCTTTTS----------SSTTCSSC---HHHHHHHHHHHHHHHHHHTCCEEE-ECCGGGST----THHH---HHH
T ss_pred EEEEEECCCcCC----------Cccccccc---CHHHHHHHHHHHHHHHHcCCCEEE-EeccccCC----ccHH---HHH
Confidence 999996 432 13566432 222222222233222 3555544 66665321 1112 233
Q ss_pred HHHHHHHhcCCCcEEEEeC
Q 008330 232 LGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 232 ~~~~aIr~~dp~~lIiVeG 250 (570)
+..+++++.+|+.+++++.
T Consensus 156 ~~~~~~~~~~~~~~~i~~e 174 (424)
T 2dh2_A 156 EWQNITKGFSEDRLLIAGT 174 (424)
T ss_dssp HHHHHHHHHCTTCEEEEEC
T ss_pred HHHHHHHHhCCCcEEEEEE
Confidence 4445667778886666665
|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
Probab=94.09 E-value=0.57 Score=51.67 Aligned_cols=68 Identities=16% Similarity=0.224 Sum_probs=45.6
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|=| |+.... .+..|.. ...+..+|.+.. .+.|+++|++|.++||
T Consensus 178 i~~~LdyLk~LGvt~I~L~Pi~~~~-~~~GYd~----------------~dy~~idp~~Gt---~~df~~lv~~~H~~Gi 237 (588)
T 1j0h_A 178 IIDHLDYLVDLGITGIYLTPIFRSP-SNHKYDT----------------ADYFEVDPHFGD---KETLKTLIDRCHEKGI 237 (588)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEECS-SSSCCSC----------------SEEEEECTTTCC---HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEECCcccCC-CCCCcCc----------------cccCccCccCCC---HHHHHHHHHHHHHCCC
Confidence 345578999999999998 553211 0111210 112345676643 5789999999999999
Q ss_pred EEEEec---CCC
Q 008330 157 MVILDN---HIS 165 (570)
Q Consensus 157 ~VILD~---H~~ 165 (570)
+||||+ |..
T Consensus 238 ~VilD~V~NH~~ 249 (588)
T 1j0h_A 238 RVMLDAVFNHCG 249 (588)
T ss_dssp EEEEEECCSBCC
T ss_pred EEEEEECcCcCc
Confidence 999995 654
|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=94.08 E-value=0.24 Score=52.55 Aligned_cols=151 Identities=17% Similarity=0.228 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 77 PMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
.+.+-++.|+++|||+|=| |+.... ..+.. ......++ ....+..+|.+.+ .+.|+++|++|.++|
T Consensus 31 ~i~~~l~yl~~lG~~~i~l~Pi~~~~-~~~~~--~~~~~gY~-------~~dy~~i~~~~Gt---~~~~~~lv~~~h~~G 97 (449)
T 3dhu_A 31 GVTADLQRIKDLGTDILWLLPINPIG-EVNRK--GTLGSPYA-------IKDYRGINPEYGT---LADFKALTDRAHELG 97 (449)
T ss_dssp HHHTTHHHHHHHTCSEEEECCCSCBC-STTCC--TTTCCTTS-------BSCTTSCCGGGCC---HHHHHHHHHHHHHTT
T ss_pred HHHHhHHHHHHcCCCEEEECCccccc-ccCCC--CCCCCCcC-------cccccccCcccCC---HHHHHHHHHHHHHCC
Confidence 3455678999999999998 443211 11000 00000000 0111245665543 467999999999999
Q ss_pred CEEEEec---CCCC--------CCccccCCCCC-----CCCCCC---CCCHHHHHHHHHHHHHHhCCC-CcEEEEeccCC
Q 008330 156 VMVILDN---HISK--------PGWCCSNSDGN-----GFFGDQ---YFNPDLWIKGLTKMATIFNGV-RNVVGMSLRNE 215 (570)
Q Consensus 156 l~VILD~---H~~~--------~~w~~~~~dgn-----g~~~d~---~~~~~~~~~~w~~iA~ryk~~-p~Vig~dL~NE 215 (570)
|+||+|+ |... |.|.....++. +-|.+. .+...+..+.+..++....+. ..+- +|...+
T Consensus 98 i~vi~D~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~dLn~~np~Vr~~l~~~l~~w~~~vDGfR-lDaa~~ 176 (449)
T 3dhu_A 98 MKVMLDIVYNHTSPDSVLATEHPEWFYHDADGQLTNKVGDWSDVKDLDYGHHELWQYQIDTLLYWSQFVDGYR-CDVAPL 176 (449)
T ss_dssp CEEEEEECCSEECTTSHHHHHCGGGBCBCTTSCBCCSSTTCTTCEEBCTTSHHHHHHHHHHHHHHTTTCSEEE-ETTGGG
T ss_pred CEEEEEEccCcCcCccchhhcCccceEECCCCCcCCCCCCCCCCCccCCCCHHHHHHHHHHHHHHHHhCCEEE-EEChhh
Confidence 9999995 6543 23432221111 112221 111122333344444444443 2222 454444
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 216 LRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 216 P~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
. ... +.+++.+++++.+|+..++-|.
T Consensus 177 ~-----~~~----f~~~~~~~~~~~~p~~~~~gE~ 202 (449)
T 3dhu_A 177 V-----PLD----FWLEARKQVNAKYPETLWLAES 202 (449)
T ss_dssp S-----CHH----HHHHHHHHHHHHSTTCEEEECC
T ss_pred C-----CHH----HHHHHHHHHHhhCCCeEEEecc
Confidence 3 123 3355668888899999887775
|
| >1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A | Back alignment and structure |
|---|
Probab=93.89 E-value=0.12 Score=49.01 Aligned_cols=97 Identities=15% Similarity=0.337 Sum_probs=64.5
Q ss_pred CceecCCCCC-----------------CCCcccc---CCcceee--cccceEEeeccCCccceeccccC-CC-CCceeEe
Q 008330 430 DPLTLGPCTE-----------------SEAWSYT---PHKTISL--KGAYFCLQAKHVGKPAKLGIICT-DC-GSTWEII 485 (570)
Q Consensus 430 ~~~~~~~c~~-----------------~~~W~~~---~~~~~~~--~~~~~cl~a~~~g~~~~~~~~c~-~~-~~~W~~~ 485 (570)
..|++|.|.. ...|... +.|.+++ ..++.||.+.+.|. ....|. +. .|.|+++
T Consensus 69 ~~lt~Wa~~~~nw~wgY~~~ds~~FG~~r~W~i~~~~p~G~VqFvN~~TgtCL~ay~nGv---v~~~C~~s~~~Q~wsii 145 (206)
T 1sr4_A 69 ALLTVWALAKRNWLWAYPNIYSQDFGNIRNWKMEPGKHREYFRFVNQSLGTCVEAYGNGL---IHDICSLDKLAQEFELL 145 (206)
T ss_dssp EEEEECSCSTTCBEEEEEGGGCGGGGGGGCEEEEECSSTTCEEEEETTTCCEEEEETTEE---EEECCCTTCGGGCEEEE
T ss_pred CEEEEEecCCCcceeeecccccCCcCCcceeEEEeecCCCEEEEEECCCCceeeeccCCe---EEecCCCCCcccEEEEe
Confidence 4488888887 2578855 4664444 55889999987773 568899 43 5999998
Q ss_pred eccccEEEEecCCCceEEEeecCCC-----ceeecceeeeCCCCCCCccCceE
Q 008330 486 SDSKMHLSSKADNGTTVCLDVDSSN-----TIVTNTCKCLSRDKTCDPASQWF 533 (570)
Q Consensus 486 s~~~~~~~~~~~~~~~~cld~~~~~-----~~~~~~c~c~~~~~~~~~~~~~~ 533 (570)
..++..+-.+ +-++..||+....+ .|.+.+|. ++..=+...|||
T Consensus 146 PttnGAVQIK-nvatg~CL~t~~~s~~~~~~i~l~~C~---d~~~~~l~QlW~ 194 (206)
T 1sr4_A 146 PTDSGAVVIK-SVSQGRCVTYNPVSTTFYSTVTLSVCD---GATEPSRDQTWY 194 (206)
T ss_dssp EBTTSCEEEE-ETTTCCEEEECSSCSSSCBCEEEECCC---CCEETTEECCEE
T ss_pred cCCCccEEEE-ECCCCccCCccCCCCceeeeEEEeecC---CCCCCCHHHCEE
Confidence 8774443333 22789999986432 56667775 222334567885
|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A | Back alignment and structure |
|---|
Probab=93.74 E-value=0.9 Score=50.06 Aligned_cols=143 Identities=15% Similarity=0.203 Sum_probs=79.6
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|=| |+.... .+..|.. ...+..+|.+.. .+.|+++|++|.++||
T Consensus 175 i~~~LdyLk~LGvt~I~L~Pi~~~~-~~~GYd~----------------~dy~~id~~~Gt---~~dfk~lv~~~H~~Gi 234 (585)
T 1wzl_A 175 VIDRLPYLEELGVTALYFTPIFASP-SHHKYDT----------------ADYLAIDPQFGD---LPTFRRLVDEAHRRGI 234 (585)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEECS-SSSCCSC----------------SEEEEECTTTCC---HHHHHHHHHHHHTTTC
T ss_pred HHHHhHHHHHcCCCEEEECCcccCC-CCCCcCc----------------ccccccCcccCC---HHHHHHHHHHHHHCCC
Confidence 345578999999999999 553211 1111210 112345666643 4779999999999999
Q ss_pred EEEEe---cCCCCCC-----------------ccccCC-------CCC--CCC-C-----CCCCCHHHHHHHHHHHHHHh
Q 008330 157 MVILD---NHISKPG-----------------WCCSNS-------DGN--GFF-G-----DQYFNPDLWIKGLTKMATIF 201 (570)
Q Consensus 157 ~VILD---~H~~~~~-----------------w~~~~~-------dgn--g~~-~-----d~~~~~~~~~~~w~~iA~ry 201 (570)
+|||| +|..... |..-.. +++ .|+ . +-.+...+..+++..++...
T Consensus 235 ~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~y~~~~~~~~~~pdln~~~~~vr~~l~~~~~~W 314 (585)
T 1wzl_A 235 KIILDAVFNHAGDQFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFW 314 (585)
T ss_dssp EEEEEECCSBCCTTSHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCcCCCccHHHHHHHhcCCCCCccCceEecCCCCCCCCCCCeeEcccCCCCCCeeCcCCHHHHHHHHHHHHHH
Confidence 99999 4654311 211000 011 122 1 11111122223333333332
Q ss_pred --CCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 202 --NGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 202 --k~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
.+-...= +|+.++.. . .+++++.++|++.+|+.+++-|.
T Consensus 315 l~~gvDGfR-~D~a~~~~-----~----~f~~~~~~~v~~~~p~~~~igE~ 355 (585)
T 1wzl_A 315 MEQGIDGWR-LDVANEVD-----H----AFWREFRRLVKSLNPDALIVGEI 355 (585)
T ss_dssp HHTTCCEEE-ETTGGGSC-----H----HHHHHHHHHHHHHCTTCEEEECC
T ss_pred HhCCCeEEE-EeccccCC-----H----HHHHHHHHHHHHHCCCEEEEEEe
Confidence 2344544 78887752 2 34456678888899999888886
|
| >3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A* | Back alignment and structure |
|---|
Probab=93.64 E-value=0.12 Score=46.76 Aligned_cols=63 Identities=8% Similarity=0.090 Sum_probs=43.9
Q ss_pred ceeecc-cceEEeeccC----CccceeccccC-CCCCc----eeEeeccc---cEEEEecCCCceEEEeec----CCC-c
Q 008330 450 TISLKG-AYFCLQAKHV----GKPAKLGIICT-DCGST----WEIISDSK---MHLSSKADNGTTVCLDVD----SSN-T 511 (570)
Q Consensus 450 ~~~~~~-~~~cl~a~~~----g~~~~~~~~c~-~~~~~----W~~~s~~~---~~~~~~~~~~~~~cld~~----~~~-~ 511 (570)
.|+-+. +++||+..+. |.++. +++|. ..+|+ |++...+. .+...+.. +.|||+. .+| .
T Consensus 8 ~I~n~~~sgk~lDv~~~sta~Gt~V~-~w~~~g~~nQ~~~~~W~~~~~~~~~~g~y~i~n~---G~~Ldv~~~~ta~Gt~ 83 (148)
T 3nbc_A 8 NITNVAYTNRLIDLTGSNPAENTLII-GHHLNKTPSGYGNQQWTLVQLPHTTIYTMQAVNP---QSYVRVRDDNLVDGAA 83 (148)
T ss_dssp EEEESSCTTCEEEEGGGCCSTTEEEE-EECCCSTTTCCGGGCEEEEECTTSSEEEEEESSS---CCEEEEGGGCCSTTCB
T ss_pred EEEEecCCCCeEECCCCcCCCCcEEE-EeCCCCChhheeecEEEEEECCCcccceEEEEEC---CcEEEccCCCCCCCcE
Confidence 355567 8999999984 65544 59999 78999 99988655 44444422 7899986 256 5
Q ss_pred eeecc
Q 008330 512 IVTNT 516 (570)
Q Consensus 512 ~~~~~ 516 (570)
|+.+.
T Consensus 84 v~~~~ 88 (148)
T 3nbc_A 84 LVGSQ 88 (148)
T ss_dssp EEEES
T ss_pred EecCC
Confidence 55543
|
| >3ii1_A Cellulase; CELM2, glucanase-xyanase, glucanase, xylanase, bifunctional enzyme, hydrolase; HET: BGC; 2.25A {Uncultured bacterium} PDB: 3fw6_A | Back alignment and structure |
|---|
Probab=93.16 E-value=2.7 Score=45.57 Aligned_cols=104 Identities=13% Similarity=0.150 Sum_probs=68.5
Q ss_pred HHHHHHHHHHhcCCCEEEEecCCCCCCcc----------ccCC-----------------CCCCCCC--------CC---
Q 008330 142 KAFQAVVASLGNNNVMVILDNHISKPGWC----------CSNS-----------------DGNGFFG--------DQ--- 183 (570)
Q Consensus 142 ~~ld~vV~~a~~~Gl~VILD~H~~~~~w~----------~~~~-----------------dgng~~~--------d~--- 183 (570)
+..+.+++...++|.+-|+-+-.. +|- |+.. .||+... +.
T Consensus 93 ~~~~~~~~~~~~~g~~~~~T~~~~--g~v~~~~~~~~~~~~~s~~~~~~q~~~~~~w~~~~gn~~~~~~~~~~~~~p~~~ 170 (535)
T 3ii1_A 93 ERGDTFIANSQAAGAQAMITIPTI--GWVARLGANRSKLASFSIAKYGAQSGNDWQWFPDAGNGVLTSGQNVTGNNPNDA 170 (535)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCS--SEEECCBGGGBCEETTBHHHHCCBSCEETTTEEEEECSBBTTSCBCCSCCGGGT
T ss_pred hHHHHHHHHHHhcCCceeEEEecc--ceEecccccCCccccccccccCcccCCccccCCccCCccccCCcccCCCCcccc
Confidence 468899999999999999987654 221 1100 0122111 11
Q ss_pred --CCCHHHHHHHHHHHHHHhCC--CCcEEEEeccCCCCCC---------C-CChhHHHHHHHHHHHHHHhcCCCcEEE
Q 008330 184 --YFNPDLWIKGLTKMATIFNG--VRNVVGMSLRNELRGP---------K-QNVKDWYRYMQLGAEAVHAANPEVLVI 247 (570)
Q Consensus 184 --~~~~~~~~~~w~~iA~ryk~--~p~Vig~dL~NEP~~~---------~-~~~~~W~~~~~~~~~aIr~~dp~~lIi 247 (570)
..+...+.++...|..+|.. .-+|=.++|-|||..- . .+.+++.+.+.+.++|||.+||...|+
T Consensus 171 ~~~~~~~y~~~~v~~l~~~~G~~~~~~vk~w~l~NE~dlW~~th~d~hp~~~t~~e~~~~~~~~Aka~K~~DP~i~l~ 248 (535)
T 3ii1_A 171 NTLVDSTFQQGWAQHLVSQWGTAAGGGLRYYILDNEPSIWFSTHRDVHPVGPTMDEIRDKMLDYGAKIKTVDPSALIV 248 (535)
T ss_dssp EEECCHHHHHHHHHHHHHHHCCTTTTSCCEEEECSCGGGHHHHTTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred cCCCcHHHHHHHHHHHHHhcCccCCCCceEEEeCCccccccccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCcEEe
Confidence 11234455666788888854 3457789999999421 1 155677777889999999999998777
|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
Probab=93.14 E-value=0.49 Score=53.40 Aligned_cols=162 Identities=18% Similarity=0.271 Sum_probs=81.9
Q ss_pred ChHHHHHHHHHHcCCcEEEe-cccccccccCccc-cchhhhhhhhcc----chhhccCcccCCCCCCCchHHHHHHHHHH
Q 008330 76 QPMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLA-SLTVRQSFQKLG----LLEAIGGIQSNNPSIVDLPLIKAFQAVVA 149 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~-n~tv~~s~~~lg----~~~~~~g~~~~nP~~~~~t~l~~ld~vV~ 149 (570)
+.+.+-++.|+++|||+|=| |+.... ....+. +.+....-...| ......+.+..+|.+-. .+.|+++|+
T Consensus 253 ~gi~~~LdyLk~LGvt~I~L~Pi~~~~-~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt---~edfk~LV~ 328 (695)
T 3zss_A 253 RTAARRLPAIAAMGFDVVYLPPIHPIG-TTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGT---LDDFDHFVT 328 (695)
T ss_dssp HHHGGGHHHHHHTTCCEEEECCCSCBC-CTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCC---HHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEECCcccCC-ccccccccccccccccCCCCcccccCCCCCccccCcccCC---HHHHHHHHH
Confidence 34556689999999999998 443211 100010 000000000000 00011124567787753 578999999
Q ss_pred HHhcCCCEEEEec---CCCCC-------CccccCCCCCC--------CCCC---CCCCH--HHHHHHHHHHHHHh--CCC
Q 008330 150 SLGNNNVMVILDN---HISKP-------GWCCSNSDGNG--------FFGD---QYFNP--DLWIKGLTKMATIF--NGV 204 (570)
Q Consensus 150 ~a~~~Gl~VILD~---H~~~~-------~w~~~~~dgng--------~~~d---~~~~~--~~~~~~w~~iA~ry--k~~ 204 (570)
+|.++||+||||+ |.... .|..-..++.. -|.+ -.+.. ....+.+..++... .+.
T Consensus 329 ~aH~~GI~VilD~V~Nhs~~~~~~~~~~dwf~~~~dg~~~~~~~~~~~~~~~~dLn~~n~~p~V~~~l~~~l~~Wi~~GV 408 (695)
T 3zss_A 329 EAGKLGLEIALDFALQCSPDHPWVHKHPEWFHHRPDGTIAHAENPPKKYQDIYPIAFDADPDGLATETVRILRHWMDHGV 408 (695)
T ss_dssp HHHHTTCEEEEEECCEECTTSTHHHHCGGGSCCCTTSCCCCEEETTEEETTCEECCCSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHCCCEEEEEeeccCCccchhhhcccceeeecCCCCcccCCCCCccccccccccccCCcHHHHHHHHHHHHHHHHhCC
Confidence 9999999999995 43322 22211111110 0111 01111 22223333333322 344
Q ss_pred CcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCC
Q 008330 205 RNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGL 251 (570)
Q Consensus 205 p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~ 251 (570)
...= +|..++- ... +++++.++|++.+|+.+++-|..
T Consensus 409 DGfR-lD~a~~~-----~~~----f~~~~~~~v~~~~pd~~~vgE~~ 445 (695)
T 3zss_A 409 RIFR-VDNPHTK-----PVA----FWERVIADINGTDPDVIFLAEAF 445 (695)
T ss_dssp CEEE-ESSGGGS-----CHH----HHHHHHHHHHHHCTTCEEEECCC
T ss_pred CEEE-ecCcchh-----hHH----HHHHHHHHHHhhCCCceEEEeec
Confidence 4444 6765532 223 34566788899999998888863
|
| >4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} | Back alignment and structure |
|---|
Probab=92.99 E-value=0.096 Score=56.86 Aligned_cols=69 Identities=10% Similarity=0.222 Sum_probs=45.3
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|=| |+...--.+..|. ....+..+|.+.. ++-|+++|++|.++||
T Consensus 34 i~~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd----------------~~dy~~vdp~~Gt---~~dfk~Lv~~aH~~Gi 94 (549)
T 4aie_A 34 IISRLDYLEKLGIDAIWLSPVYQSPGVDNGYD----------------ISDYEAIDPQYGT---MADMDELISKAKEHHI 94 (549)
T ss_dssp HHTTHHHHHHHTCSEEEECCCEECCCTTTTSS----------------CSEEEEECTTTCC---HHHHHHHHHHHHHTTC
T ss_pred HHHhhHHHHHCCCCEEEeCCCcCCCCCCCCcC----------------ccCCCCcCcccCC---HHHHHHHHHHHHHCCC
Confidence 334478899999999998 5532100011121 0112455777643 5679999999999999
Q ss_pred EEEEec---CCC
Q 008330 157 MVILDN---HIS 165 (570)
Q Consensus 157 ~VILD~---H~~ 165 (570)
+||||+ |..
T Consensus 95 ~VilD~V~NHts 106 (549)
T 4aie_A 95 KIVMDLVVNHTS 106 (549)
T ss_dssp EEEEEECCSBCC
T ss_pred EEEEEECccCCc
Confidence 999995 753
|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* | Back alignment and structure |
|---|
Probab=92.98 E-value=0.077 Score=57.91 Aligned_cols=101 Identities=16% Similarity=0.147 Sum_probs=60.4
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGI 128 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~ 128 (570)
.++.|.+++.+|..... ..|-+.+.+.+-++.|+++|+|+|=| |+....-... .+ ..+-... .+. .
T Consensus 14 ~~~~vi~q~F~w~~~~~---~gGd~~~gi~~~LdyLk~LGvt~IwL~Pi~e~~~~~~--~~---~~~~~~~----GY~-~ 80 (527)
T 1gcy_A 14 GGDEIILQGFHWNVVRE---APNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWS--DG---SKSGGGE----GYF-W 80 (527)
T ss_dssp GGCCCEEECCCTTHHHH---STTTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC--------CCBCCS----STT-C
T ss_pred CCCcEEEEEEEcCCCcc---cCCcHHHHHHHHHHHHHhcCCCEEEeCCccccccccc--cC---CCCCCCC----Ccc-c
Confidence 55667888988853211 01222144566789999999999998 5542110000 00 0000000 112 3
Q ss_pred ccCC--CCCCCchHHHHHHHHHHHHhcCCCEEEEe---cCCCC
Q 008330 129 QSNN--PSIVDLPLIKAFQAVVASLGNNNVMVILD---NHISK 166 (570)
Q Consensus 129 ~~~n--P~~~~~t~l~~ld~vV~~a~~~Gl~VILD---~H~~~ 166 (570)
+..+ |.+-. .+-|+++|++|.++||+|||| +|...
T Consensus 81 ~~id~~p~~Gt---~~dfk~Lv~~aH~~GI~VilD~V~NHt~~ 120 (527)
T 1gcy_A 81 HDFNKNGRYGS---DAQLRQAASALGGAGVKVLYDVVPNHMNR 120 (527)
T ss_dssp SSSCSCSSSCC---HHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred ccCCCCCCCCC---HHHHHHHHHHHHHCCCEEEEEEeecCcCC
Confidence 4556 77643 678999999999999999999 47653
|
| >2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} | Back alignment and structure |
|---|
Probab=92.76 E-value=1.2 Score=51.82 Aligned_cols=147 Identities=17% Similarity=0.198 Sum_probs=79.4
Q ss_pred HHHHHHHcCCcEEEe-cccccc-cc-------cCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHH
Q 008330 81 LSKRVVDMGFNCVRL-TWPLYL-AT-------NDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASL 151 (570)
Q Consensus 81 ~~~~i~~~GfN~VRl-Pi~~~~-~~-------~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a 151 (570)
.++.|+++|+|+|=| |+.... .. +-.|.. .+.. +..+-|..+| .+...++.|+++|++|
T Consensus 474 ~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wGYd~---------~dy~-ap~~~y~~dp--~Gt~~~~dfk~LV~~a 541 (921)
T 2wan_A 474 GIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDP---------RNYN-VPEGAYATTP--EGTARITELKQLIQSL 541 (921)
T ss_dssp HHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCCCSE---------EEEE-EECGGGSSCS--STTHHHHHHHHHHHHH
T ss_pred hhHHHHHcCCCEEEeCCccccCcccccccCcCCcCCCC---------cCCC-CCCcccccCC--CCCccHHHHHHHHHHH
Confidence 489999999999998 554321 10 001110 0000 0111235566 3334478899999999
Q ss_pred hcCCCEEEEec---CCCCCC----------cccc-CCCCC-----CCCCCCCC-CH---HHHHHHHHHHHHHhCCCCcEE
Q 008330 152 GNNNVMVILDN---HISKPG----------WCCS-NSDGN-----GFFGDQYF-NP---DLWIKGLTKMATIFNGVRNVV 208 (570)
Q Consensus 152 ~~~Gl~VILD~---H~~~~~----------w~~~-~~dgn-----g~~~d~~~-~~---~~~~~~w~~iA~ryk~~p~Vi 208 (570)
.++||+||||+ |....+ |... ..+++ ++..+-.+ ++ +.+++..+..+++| +....=
T Consensus 542 H~~GI~VILDvV~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~~~~g~~~dln~~~p~Vr~~i~d~l~~Wl~e~-gVDGfR 620 (921)
T 2wan_A 542 HQQRIGVNMDVVYNHTFDVMVSDFDKIVPQYYYRTDSNGNYTNGSGCGNEFATEHPMAQKFVLDSVNYWVNEY-HVDGFR 620 (921)
T ss_dssp HHTTCEEEEEECTTCCSCSSSSHHHHHSTTTTBCBCTTSCBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHH-CCCEEE
T ss_pred HHcCCEEEEEEccccccccccccccCCCCCeEEEcCCCCcccCCCCcccccccCCHHHHHHHHHHHHHHHHHc-CCCEEE
Confidence 99999999994 765422 1100 00111 11111111 12 22333344444444 334444
Q ss_pred EEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 209 GMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 209 g~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
||++..- .. ..++++.+++++++|+.+++-|.
T Consensus 621 -~Da~~~~-----~~----~~~~~~~~~l~~~~p~~~ligE~ 652 (921)
T 2wan_A 621 -FDLMALL-----GK----DTMAKISNELHAINPGIVLYGEP 652 (921)
T ss_dssp -ETTGGGG-----CH----HHHHHHHHHHHHHCTTCEEEECS
T ss_pred -ecccccc-----CH----HHHHHHHHHHHHhCCceEEEEec
Confidence 7777542 12 23456667888889999888886
|
| >1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* | Back alignment and structure |
|---|
Probab=92.70 E-value=0.12 Score=54.36 Aligned_cols=89 Identities=19% Similarity=0.252 Sum_probs=54.5
Q ss_pred EEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccC
Q 008330 53 RVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSN 131 (570)
Q Consensus 53 ~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~ 131 (570)
.|.+++.+|....+ ..| +-+.+.+-++.|+++|||+|=| |+.... ....|.. ...+..
T Consensus 2 ~v~~~~F~~d~~~d---~~G-~~~gi~~~ldyl~~lGv~~i~l~Pi~~~~-~~~gY~~----------------~d~~~i 60 (405)
T 1ht6_A 2 QVLFQGFNWESWKQ---SGG-WYNMMMGKVDDIAAAGVTHVWLPPPSHSV-SNEGYMP----------------GRLYDI 60 (405)
T ss_dssp CCEEECCCTTGGGC---TTC-HHHHHHTTHHHHHHTTCCEEEECCCSCBS-STTSSSB----------------CCTTCG
T ss_pred ccEEEeEEcCCCCC---CCc-CHHHHHHHHHHHHHcCCCEEEeCCCccCC-CCCCCCc----------------cccccC
Confidence 35677777743211 011 1133455678999999999999 453321 1111210 012345
Q ss_pred C-CCCCCchHHHHHHHHHHHHhcCCCEEEEe---cCCC
Q 008330 132 N-PSIVDLPLIKAFQAVVASLGNNNVMVILD---NHIS 165 (570)
Q Consensus 132 n-P~~~~~t~l~~ld~vV~~a~~~Gl~VILD---~H~~ 165 (570)
+ |.+-. .+.|+++|++|.++||+||+| +|..
T Consensus 61 d~~~~Gt---~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 61 DASKYGN---AAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp GGCTTCC---HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CCccCCC---HHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 6 66643 577999999999999999999 4654
|
| >3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* | Back alignment and structure |
|---|
Probab=92.57 E-value=1.2 Score=51.67 Aligned_cols=100 Identities=21% Similarity=0.384 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHhcCCCEEEEec---CCCC--------CCccc-cCCCCC--CCCC--CCCC-C---HHHHHHHHHHHHH
Q 008330 140 LIKAFQAVVASLGNNNVMVILDN---HISK--------PGWCC-SNSDGN--GFFG--DQYF-N---PDLWIKGLTKMAT 199 (570)
Q Consensus 140 ~l~~ld~vV~~a~~~Gl~VILD~---H~~~--------~~w~~-~~~dgn--g~~~--d~~~-~---~~~~~~~w~~iA~ 199 (570)
.++.|+++|++|.++||.||||+ |... |.|.. ...++. ..|+ +-.+ . .+..++..+..++
T Consensus 368 ~~~efk~lV~~~H~~GI~VILDvV~NH~a~~~~~~~~~p~yy~~~~~dg~~~~~~~g~~ln~~~p~Vr~~i~d~l~~Wv~ 447 (877)
T 3faw_A 368 RIAELKQLIHDIHKRGMGVILDVVYNHTAKTYLFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAMSRRVLVDSIKYLTS 447 (877)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTCCSCTHHHHTTSTTTSBCBCTTSCBCEETTEECBCTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEEEEeeccccCccccccCCCceeeeeCCCCCeeccCCCcccccCCHHHHHHHHHHHHHHHH
Confidence 37889999999999999999994 6553 23321 011111 0111 0001 1 2233444455555
Q ss_pred HhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 200 IFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 200 ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
.|. ....- ||++-.. ....| +++..++++.+|+.+++-|+
T Consensus 448 e~g-VDGFR-fD~a~~~-----~~~~~----~~~~~~~~~~~P~~~ligE~ 487 (877)
T 3faw_A 448 EFK-VDGFR-FDMMGDH-----DAAAI----ELAYKEAKAINPNMIMIGEG 487 (877)
T ss_dssp HHC-CCEEE-ETTGGGS-----BHHHH----HHHHHHHHHHCTTCEEEECC
T ss_pred HcC-CcEEE-EecCCcC-----CHHHH----HHHHHHHHhhCCCcEEEEcc
Confidence 553 33333 6776321 22334 56678888999998888886
|
| >1dqg_A Mannose receptor; beta trefoil, multilectin receptor, pituitary hormones, sulfated carbohydrate, sugar binding protein; 1.70A {Mus musculus} SCOP: b.42.2.2 PDB: 1dqo_A* 1fwu_A* 1fwv_A* | Back alignment and structure |
|---|
Probab=92.46 E-value=0.21 Score=44.36 Aligned_cols=71 Identities=18% Similarity=0.319 Sum_probs=53.5
Q ss_pred cceeeCCCCceeeeecCCCCceecC-CCCCC---CCccccCCcceeecccceEEeeccCCc--cceeccccC--CCCCce
Q 008330 411 HKVIYHPATGLCVQRKSFLDPLTLG-PCTES---EAWSYTPHKTISLKGAYFCLQAKHVGK--PAKLGIICT--DCGSTW 482 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~~~~~~~~-~c~~~---~~W~~~~~~~~~~~~~~~cl~a~~~g~--~~~~~~~c~--~~~~~W 482 (570)
..+|+|..++.|+.+.+. . +.+. +|+.. +.|....+..|--.++.+||-+.+... ++.+ +.|. +..+.|
T Consensus 5 ~F~I~~e~~~~Cl~a~~~-~-~v~~~~C~~~s~~q~WkWvS~~rLfnlgs~~CLGl~~~~~~~~l~l-~~CD~~~~~l~W 81 (135)
T 1dqg_A 5 QFLIYNEDHKRCVDALSA-I-SVQTATCNPEAESQKFRWVSDSQIMSVAFKLCLGVPSKTDWASVTL-YACDSKSEYQKW 81 (135)
T ss_dssp CBCEEETTTTEEEEEEET-T-EEEEESCCTTCGGGCEEESSSSCEEETTTTEEEECSSSCTTCBCEE-ECCCTTCTTSCE
T ss_pred eEEEEECCCCceeeecCc-c-EEEeccCCCCChhheEEEeccCceeccCcCcccccCCCCCcceeEE-EecCCCCccceE
Confidence 358999999999998654 3 6674 99954 699998776665568999999965544 4555 8999 345899
Q ss_pred eE
Q 008330 483 EI 484 (570)
Q Consensus 483 ~~ 484 (570)
+=
T Consensus 82 ~C 83 (135)
T 1dqg_A 82 EC 83 (135)
T ss_dssp EE
T ss_pred Ee
Confidence 84
|
| >1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=92.01 E-value=0.29 Score=53.16 Aligned_cols=100 Identities=10% Similarity=0.095 Sum_probs=56.9
Q ss_pred CCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEe-ccccccc-ccCccccchhhhhhhhccchhhccCc
Q 008330 51 GHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLA-TNDSLASLTVRQSFQKLGLLEAIGGI 128 (570)
Q Consensus 51 G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~-~~~~~~n~tv~~s~~~lg~~~~~~g~ 128 (570)
++.|.+++..|.... +|-+-+.+.+-++.|+++|||+|=| |+....- ....|... .+-.++ +- ..-
T Consensus 4 ~~~v~~q~F~W~~~~-----~gG~~~gi~~~LdyLk~LGvt~IwL~Pi~~~~~~~~~GY~~~----dy~~l~--~f-~~~ 71 (515)
T 1hvx_A 4 FNGTMMQYFEWYLPD-----DGTLWTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVY----DLYDLG--EF-NQK 71 (515)
T ss_dssp CCCCEEECCCTTCCS-----SSCHHHHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEE----ETTCSS--CS-CBT
T ss_pred CCceEEEEEEccCCC-----CCCcHHHHHHHHHHHHhcCCCEEEeCCcccCCCCCCCCcCee----cccccc--cc-ccc
Confidence 456778888886332 2222244566678999999999999 4432110 00012100 000000 00 000
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEe---cCCC
Q 008330 129 QSNNPSIVDLPLIKAFQAVVASLGNNNVMVILD---NHIS 165 (570)
Q Consensus 129 ~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD---~H~~ 165 (570)
...+|.+-. .+.|+++|++|.++||+|||| +|..
T Consensus 72 ~~idp~~Gt---~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 108 (515)
T 1hvx_A 72 GAVRTKYGT---KAQYLQAIQAAHAAGMQVYADVVFDHKG 108 (515)
T ss_dssp TBSSCSSCC---HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CccCCCCCC---HHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 014566532 577999999999999999999 4763
|
| >1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* | Back alignment and structure |
|---|
Probab=91.86 E-value=0.27 Score=52.31 Aligned_cols=70 Identities=13% Similarity=0.085 Sum_probs=45.1
Q ss_pred HHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEE
Q 008330 80 MLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158 (570)
Q Consensus 80 ~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~V 158 (570)
+.++.|+++|+|+|=| |+.... .+..+ . .|.. +..+..+|.+-. .+.|+++|++|.++||+|
T Consensus 19 ~lldyL~~LGv~~I~l~Pi~~~~-~~~~~--------~--~gY~---~~~y~idp~~Gt---~~dfk~Lv~~aH~~Gi~V 81 (448)
T 1g94_A 19 ECEQYLGPKGYAAVQVSPPNEHI-TGSQW--------W--TRYQ---PVSYELQSRGGN---RAQFIDMVNRCSAAGVDI 81 (448)
T ss_dssp HHHHTHHHHTCCEEEECCCSCBB-CSSSG--------G--GGGS---BSCSCSCBTTBC---HHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHcCCCEEEECCccccC-CCCCC--------c--cccc---ccccccCCCCCC---HHHHHHHHHHHHHCCCEE
Confidence 3468899999999999 553321 11000 0 0000 012556776643 678999999999999999
Q ss_pred EEe---cCCCC
Q 008330 159 ILD---NHISK 166 (570)
Q Consensus 159 ILD---~H~~~ 166 (570)
||| +|...
T Consensus 82 ilD~V~NH~~~ 92 (448)
T 1g94_A 82 YVDTLINHMAA 92 (448)
T ss_dssp EEEEECSEECS
T ss_pred EEEEeeccccC
Confidence 999 46543
|
| >3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A | Back alignment and structure |
|---|
Probab=90.99 E-value=0.35 Score=51.93 Aligned_cols=97 Identities=19% Similarity=0.258 Sum_probs=54.3
Q ss_pred EEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEe-ccccccc-ccCccccchhhhhhhhccchhhccCcccC
Q 008330 54 VKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLA-TNDSLASLTVRQSFQKLGLLEAIGGIQSN 131 (570)
Q Consensus 54 v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~-~~~~~~n~tv~~s~~~lg~~~~~~g~~~~ 131 (570)
|.+++..|.-.. +|-+-+.+.+-++.|+++|||+|=| |+....- ....|... ++-.++ + ...-...
T Consensus 4 vi~q~f~w~~~~-----~gG~~~gi~~~LdyL~~LGvt~I~L~Pi~~~~~~~~~GY~~~----dy~~~~--~-~~~~~~i 71 (483)
T 3bh4_A 4 TLMQYFEWYTPN-----DGQHWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPY----DLYDLG--E-FQQKGTV 71 (483)
T ss_dssp CEEECCCTTCCS-----SSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTSCSSSEE----ETTCSS--C-SCCSSCS
T ss_pred cEEEEEEeccCC-----CCCCHHHHHHHHHHHHhcCCCEEEcCccccCCCCCCCCcccc----cccccc--c-ccccCcc
Confidence 567777775322 2212234566688999999999999 4432110 00012100 000000 0 0000024
Q ss_pred CCCCCCchHHHHHHHHHHHHhcCCCEEEEe---cCCC
Q 008330 132 NPSIVDLPLIKAFQAVVASLGNNNVMVILD---NHIS 165 (570)
Q Consensus 132 nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD---~H~~ 165 (570)
+|.+-. .+-|+++|++|.++||+|||| +|..
T Consensus 72 d~~~Gt---~~df~~lv~~aH~~Gi~VilD~V~NH~~ 105 (483)
T 3bh4_A 72 RTKYGT---KSELQDAIGSLHSRNVQVYGDVVLNHKA 105 (483)
T ss_dssp SCSSCC---HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CCCCCC---HHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 666543 678999999999999999999 4763
|
| >2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A | Back alignment and structure |
|---|
Probab=90.75 E-value=0.28 Score=52.53 Aligned_cols=78 Identities=18% Similarity=0.247 Sum_probs=48.0
Q ss_pred ChHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 76 QPMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
+.+.+-++.|+++|||+|=| |+.........+. .+ ..|.. ....+..+|.+-. .+.|+++|++|.++
T Consensus 43 ~gi~~~LdyL~~lGvt~I~l~Pi~~~~~~~~~~~-----~~--~~GY~--~~d~~~idp~~Gt---~~df~~lv~~~H~~ 110 (478)
T 2guy_A 43 QGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYG-----DA--YHGYW--QQDIYSLNENYGT---ADDLKALSSALHER 110 (478)
T ss_dssp HHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTB-----CC--TTSCS--EEEEEEECTTSCC---HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCEEEeCCcccCCccccCCC-----CC--CCCCC--cccccccCccCCC---HHHHHHHHHHHHHC
Confidence 34556678999999999999 5643211100000 00 00000 0112456777653 57899999999999
Q ss_pred CCEEEEe---cCCC
Q 008330 155 NVMVILD---NHIS 165 (570)
Q Consensus 155 Gl~VILD---~H~~ 165 (570)
||+|||| +|..
T Consensus 111 Gi~VilD~V~NH~~ 124 (478)
T 2guy_A 111 GMYLMVDVVANHMG 124 (478)
T ss_dssp TCEEEEEECCSBCC
T ss_pred CCEEEEEECcccCC
Confidence 9999999 4654
|
| >1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* | Back alignment and structure |
|---|
Probab=90.65 E-value=0.29 Score=53.64 Aligned_cols=69 Identities=12% Similarity=0.182 Sum_probs=45.7
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|=| |+.........|.- ...+..+|.+.. .+-|+++|++|.++||
T Consensus 34 i~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~----------------~dy~~idp~~Gt---~~df~~Lv~~aH~~Gi 94 (557)
T 1zja_A 34 LTEKLDYLKGLGIDAIWINPHYASPNTDNGYDI----------------SDYREVMKEYGT---MEDFDRLMAELKKRGM 94 (557)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEECCCTTTTSSC----------------SEEEEECTTTCC---HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEECCCccCCCCCCCCCc----------------ccccccCcccCC---HHHHHHHHHHHHHCCC
Confidence 445578999999999998 55321110111210 011345676643 5789999999999999
Q ss_pred EEEEec---CCC
Q 008330 157 MVILDN---HIS 165 (570)
Q Consensus 157 ~VILD~---H~~ 165 (570)
+||||+ |..
T Consensus 95 ~VilD~V~NHts 106 (557)
T 1zja_A 95 RLMVDVVINHSS 106 (557)
T ss_dssp EEEEEECCSBCC
T ss_pred EEEEEEeccccc
Confidence 999994 654
|
| >1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* | Back alignment and structure |
|---|
Probab=90.52 E-value=0.36 Score=51.12 Aligned_cols=69 Identities=13% Similarity=0.183 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 77 PMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
.+.+-++.|+++|+|+|=| |+.... ....|.. ...+..+|.+.. .+.|+++|++|.++|
T Consensus 24 gi~~~LdyL~~LGv~~I~L~Pi~~~~-~~~GY~~----------------~dy~~idp~~Gt---~~df~~lv~~aH~~G 83 (441)
T 1lwj_A 24 GLKNAVSYLKELGIDFVWLMPVFSSI-SFHGYDV----------------VDFYSFKAEYGS---EREFKEMIEAFHDSG 83 (441)
T ss_dssp HHHHTHHHHHHTTCCEEEECCCEECS-SSSCCSC----------------SEEEEECTTTCC---HHHHHHHHHHHHHTT
T ss_pred HHHHhhHHHHHcCCCEEEeCCCcCCC-CCCCCCc----------------ccccccCcccCC---HHHHHHHHHHHHHCC
Confidence 3456688999999999999 553211 1111210 011345676643 578999999999999
Q ss_pred CEEEEec---CCC
Q 008330 156 VMVILDN---HIS 165 (570)
Q Consensus 156 l~VILD~---H~~ 165 (570)
|+||||+ |..
T Consensus 84 i~VilD~V~NH~~ 96 (441)
T 1lwj_A 84 IKVVLDLPIHHTG 96 (441)
T ss_dssp CEEEEEECTTBCC
T ss_pred CEEEEEeCCCccc
Confidence 9999995 654
|
| >3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* | Back alignment and structure |
|---|
Probab=90.46 E-value=0.37 Score=56.19 Aligned_cols=120 Identities=8% Similarity=0.038 Sum_probs=67.8
Q ss_pred CCCCCCCeEecCCeEEcC--CCCEEEEEEeeCCCCCCccccCCCCC---ChHHHHHHHHHHcCCcEEEe-cccccccccC
Q 008330 32 KPAIGLPLSTNSRWIVDE--NGHRVKLACVNWVSHLEPVVAEGLSK---QPMDMLSKRVVDMGFNCVRL-TWPLYLATND 105 (570)
Q Consensus 32 ~~~~~~~L~t~G~~IVd~--~G~~v~L~GVNw~g~~~~~v~~Gl~~---~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~ 105 (570)
..+++...+++|.-+-.. -+..|.+.|..|..... .+.|. ..+.+.++.|+++|+++|=| |+.... ...
T Consensus 808 r~~~s~~~~~~~~~~~s~~alds~Vi~QgF~W~~~~~----g~~w~~Ty~~I~~kLdYLk~LGITaIwL~Pi~~s~-~~~ 882 (1108)
T 3ttq_A 808 RTAATTTENHDGKVLHSNAALDSNLIYEGFSNFQPKA----TTHDELTNVVIAKNADVFNNWGITSFEMAPQYRSS-GDH 882 (1108)
T ss_dssp CCCCCCCBCCSSCSCCCSHHHHTCCEEECCCTTCCCC----SSGGGSHHHHHHHTHHHHHHHTCCEEECCCCSCBC-CCC
T ss_pred ccCccceeccCCccccCCCCCCCceEEEeEECCCCCC----CCccchhHHHHHHHHHHHHHcCCCEEEECCCccCC-Ccc
Confidence 344445556666533222 23578999999975432 23332 14667789999999999999 443211 100
Q ss_pred ccccchhhhhhhhccc--hhhc-cCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEec---CCC
Q 008330 106 SLASLTVRQSFQKLGL--LEAI-GGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDN---HIS 165 (570)
Q Consensus 106 ~~~n~tv~~s~~~lg~--~~~~-~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~---H~~ 165 (570)
.+ . ......|. .+.+ .| +..+|.+- -.+-|+++|++|.++||.||||+ |..
T Consensus 883 ~~----~-~~~~d~GYdi~D~y~lG-f~i~~~yG---t~edfk~LV~alH~~GI~VIlDvV~NHta 939 (1108)
T 3ttq_A 883 TF----L-DSTIDNGYAFTDRYDLG-FNTPTKYG---TDGDLRATIQALHHANMQVMADVVDNQVY 939 (1108)
T ss_dssp SS----G-GGTTTCSSSBSCTTCSS-SSSCCSSC---CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred cc----c-cccccCCcccccccccC-cCCCCCCC---CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 00 0 00000000 0000 01 22456653 35789999999999999999994 654
|
| >1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A | Back alignment and structure |
|---|
Probab=90.29 E-value=0.44 Score=51.08 Aligned_cols=99 Identities=14% Similarity=0.164 Sum_probs=55.9
Q ss_pred CEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEe-ccccccc-ccCccccchhhhhhhhccchhhccCcc
Q 008330 52 HRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLA-TNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 52 ~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~-~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
+.|.+++..|.... +|-+-+.+.+-++.|+++|||+|=| |+....- ....|... ++-.++ + ...-.
T Consensus 4 ~~vi~q~f~w~~~~-----~gG~~~gi~~~LdyL~~LGvt~I~l~Pi~~~~~~~~~GY~~~----dy~~~~--~-~~~~~ 71 (480)
T 1ud2_A 4 NGTMMQYYEWHLEN-----DGQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAY----DLYDLG--E-FNQKG 71 (480)
T ss_dssp CCCEEECCCTTCCC-----SSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEE----ETTCSS--C-SCBTT
T ss_pred CceEEEeeeccCCC-----CCCcHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCcCcc----chhhcc--c-ccccC
Confidence 34677777775321 2222244566688999999999999 4432110 00012100 000000 0 00000
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEe---cCCC
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILD---NHIS 165 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD---~H~~ 165 (570)
..+|.+-. .+.|+++|++|.++||+|||| +|..
T Consensus 72 ~idp~~Gt---~~df~~lv~~aH~~Gi~VilD~V~NH~~ 107 (480)
T 1ud2_A 72 TVRTKYGT---KAQLERAIGSLKSNDINVYGDVVMNHKM 107 (480)
T ss_dssp BSSCSSCC---HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred ccCCCCCC---HHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 24666543 678999999999999999999 4763
|
| >2ddx_A Beta-1,3-xylanase; glycoside hydrolase, TIM barrel, hydrola; 0.86A {Vibrio SP} | Back alignment and structure |
|---|
Probab=90.17 E-value=2.7 Score=43.05 Aligned_cols=143 Identities=14% Similarity=0.196 Sum_probs=82.2
Q ss_pred HHHHHHHHHHhCCCCcEEEEeccCCCCCCC--CChhHHHHHHHHHHHHHHhcC-CCcEEEE-eCCCCCCc--chhhhhcc
Q 008330 191 IKGLTKMATIFNGVRNVVGMSLRNELRGPK--QNVKDWYRYMQLGAEAVHAAN-PEVLVIL-SGLNFDKD--LSFVRNQA 264 (570)
Q Consensus 191 ~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~--~~~~~W~~~~~~~~~aIr~~d-p~~lIiV-eG~~w~~d--l~~~~~~p 264 (570)
.+.++++|+..++..--+.+-+..|..+.+ .+.+++.+..+.+++++|+.+ .+.+++| ....+... -.....+|
T Consensus 92 d~~i~~~a~~l~~~gvPV~~R~~HEmnG~W~~~~p~~y~~~wr~v~d~~r~~g~~~N~~wvWspn~~~p~~~~~~~~~YP 171 (333)
T 2ddx_A 92 NANIDTLLNTLAGYDRPVYLRWAYEVDGPWNGHSPSGIVTSFQYVHDRIIALGHQAKISLVWQVASYCPTPGGQLDQWWP 171 (333)
T ss_dssp HHHHHHHHHHHHTTCSCEEEEETSSTTCGGGCCCHHHHHHHHHHHHHHHHHHTCTTTEEEEEECCCCTTSCSSCCGGGCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccCCCCcCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEeCCCCCCCCCCchhhcCC
Confidence 345677777776543323499999998875 467889999999999999985 2444554 43321100 01111122
Q ss_pred cCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCC-------------CCCC
Q 008330 265 VNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADL-------------RGNN 331 (570)
Q Consensus 265 ~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~-------------~~~~ 331 (570)
=+ +-=-|+.+-.|.+... .| . .+.....+....+.|+.|+|+|... .+.+
T Consensus 172 GD---dyVDivG~D~Y~~~~~-~~---------~----~~~~~~~~a~~~~KPi~i~E~G~~~~~~~~l~~~~~~~~G~n 234 (333)
T 2ddx_A 172 GS---EYVDWVGLSYFAPQDC-NW---------D----RVNEAAQFARSKGKPLFLNESTPQRYQVADLTYSADPAKGTN 234 (333)
T ss_dssp CG---GGCSEEEEEESSGGGG-TT---------H----HHHHHHHHHHHHTCCEEEEEECCTTEETTTTEECSCTTTCCS
T ss_pred CC---CEEEEEEEeccCCCCc-CH---------H----HHHHHHHHHhcCCCcEEEeccCCcccccccccccccccCCcc
Confidence 00 0012556666653211 11 1 1222233445689999999999763 1111
Q ss_pred -cch------HHHHHHHHHHHHHC-CC
Q 008330 332 -VND------NRYLNCFFGVAAEL-DW 350 (570)
Q Consensus 332 -~~~------~~~~~~~~~~~~~~-gi 350 (570)
... ..|++.+++.++++ ++
T Consensus 235 ~~~k~~~~~w~~W~~~~~~~l~~~p~v 261 (333)
T 2ddx_A 235 RQSKTSQQLWDEWFAPYFQFMSDNSDI 261 (333)
T ss_dssp CEECCHHHHHHHTHHHHHHHHHHTTTT
T ss_pred ccccccchhHHHHHHHHHHHHHhCcch
Confidence 112 68999999988874 44
|
| >2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=90.05 E-value=0.36 Score=51.79 Aligned_cols=77 Identities=13% Similarity=0.188 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 77 PMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
.+.+-++.|+++|||+|=| |+....-.+..+. .+ ..|.. ....+..+|.+-. .+.|+++|++|.++|
T Consensus 44 gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~~~~-----~~--~~GY~--~~dy~~id~~~Gt---~~df~~lv~~~H~~G 111 (484)
T 2aaa_A 44 GIIDHLDYIEGMGFTAIWISPITEQLPQDTADG-----EA--YHGYW--QQKIYDVNSNFGT---ADNLKSLSDALHARG 111 (484)
T ss_dssp HHHHTHHHHHTTTCCEEEECCCEEECCCCBTTB-----CS--TTSCS--EEEEEEECTTTCC---HHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhcCCCEEEeCccccCcccccccC-----CC--CCCcC--cccccccCcccCC---HHHHHHHHHHHHHCC
Confidence 3556678999999999999 5543211100000 00 00000 0112355777653 578999999999999
Q ss_pred CEEEEec---CCC
Q 008330 156 VMVILDN---HIS 165 (570)
Q Consensus 156 l~VILD~---H~~ 165 (570)
|+||||+ |..
T Consensus 112 i~VilD~V~NH~~ 124 (484)
T 2aaa_A 112 MYLMVDVVPDHMG 124 (484)
T ss_dssp CEEEEEECCSBCC
T ss_pred CEEEEEECcCCcC
Confidence 9999994 765
|
| >2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* | Back alignment and structure |
|---|
Probab=89.90 E-value=2.4 Score=47.90 Aligned_cols=148 Identities=20% Similarity=0.235 Sum_probs=77.1
Q ss_pred HHHHHHHcCCcEEEe-cccccc-ccc--------CccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHH
Q 008330 81 LSKRVVDMGFNCVRL-TWPLYL-ATN--------DSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVAS 150 (570)
Q Consensus 81 ~~~~i~~~GfN~VRl-Pi~~~~-~~~--------~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~ 150 (570)
-++.|+++|+|+|=| |+.... ..+ ..|.. .+.. ...+-+..||... ..-++.|+++|++
T Consensus 256 ~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wGYd~---------~dy~-a~~~~yg~~p~~g-~~~~~dfk~LV~~ 324 (718)
T 2e8y_A 256 GLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNP---------LHFF-APEGSYASNPHDP-QTRKTELKQMINT 324 (718)
T ss_dssp HHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCCCSE---------EEEE-EECSTTSSCSSSH-HHHHHHHHHHHHH
T ss_pred hhHHHHHcCCCEEEECCccccCccccccccccCcCCCCc---------cCCC-CcCcccccCCCCc-cccHHHHHHHHHH
Confidence 589999999999999 554211 000 00110 0000 0011123344321 1236889999999
Q ss_pred HhcCCCEEEEe---cCCCCC----------Ccccc-CCCC---C-CCCC-CCCC-CH---HHHHHHHHHHHHHhCCCCcE
Q 008330 151 LGNNNVMVILD---NHISKP----------GWCCS-NSDG---N-GFFG-DQYF-NP---DLWIKGLTKMATIFNGVRNV 207 (570)
Q Consensus 151 a~~~Gl~VILD---~H~~~~----------~w~~~-~~dg---n-g~~~-d~~~-~~---~~~~~~w~~iA~ryk~~p~V 207 (570)
|.++||+|||| +|.... .|... ..++ + .+++ |-.+ ++ +.+++..+..+++| +-...
T Consensus 325 aH~~GI~VIlDvV~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~n~~~~g~dln~~np~Vr~~i~d~~~~Wl~e~-gVDGf 403 (718)
T 2e8y_A 325 LHQHGLRVILDVVFNHVYKRENSPFEKTVPGYFFRHDECGKPSNGTGVGNDIASERRMARKFIADCVVYWLEEY-NVDGF 403 (718)
T ss_dssp HHHTTCEEEEEECTTCCSSGGGSHHHHHSTTTSBCBCTTSSBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHH-CCCEE
T ss_pred HHHCCCEEEEEEecccccCcccccccccCCCeEEecCCCCcccCCCCcccccccCCHHHHHHHHHHHHHHHHHh-CCCEE
Confidence 99999999999 475532 12110 0011 1 1222 1111 12 22333344444444 34454
Q ss_pred EEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 208 VGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 208 ig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
= +|+.+... .. .++++.+++++++|+.+++-|.
T Consensus 404 R-~D~~~~~~-----~~----~~~~~~~~~~~~~p~~~ligE~ 436 (718)
T 2e8y_A 404 R-FDLLGILD-----ID----TVLYMKEKATKAKPGILLFGEG 436 (718)
T ss_dssp E-ETTGGGSB-----HH----HHHHHHHHHHHHSTTCEEEECC
T ss_pred E-EeccccCC-----HH----HHHHHHHHHHHhCCCeEEEEee
Confidence 4 78776531 22 3345567788889998888886
|
| >2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* | Back alignment and structure |
|---|
Probab=89.75 E-value=0.32 Score=53.16 Aligned_cols=69 Identities=9% Similarity=0.102 Sum_probs=44.8
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|=| |+......+..|.. ...+..+|.+.. .+-|+++|++|.++||
T Consensus 33 i~~~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~----------------~dy~~idp~~Gt---~~df~~lv~~~h~~Gi 93 (543)
T 2zic_A 33 ITSKLDYLQKLGVMAIWLSPVYDSPMDDNGYDI----------------ANYEAIADIFGN---MADMDNLLTQAKMRGI 93 (543)
T ss_dssp HHHTHHHHHHHTCSEEEECCCEECCCTTTTSSC----------------SEEEEECGGGCC---HHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCCCCc----------------ccccccCcccCC---HHHHHHHHHHHHHCCC
Confidence 445578999999999999 55321110111210 011244565532 6789999999999999
Q ss_pred EEEEec---CCC
Q 008330 157 MVILDN---HIS 165 (570)
Q Consensus 157 ~VILD~---H~~ 165 (570)
+||||+ |..
T Consensus 94 ~VilD~V~NH~s 105 (543)
T 2zic_A 94 KIIMDLVVNHTS 105 (543)
T ss_dssp EEEEEECCSBCC
T ss_pred EEEEEEecCccc
Confidence 999994 654
|
| >4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=89.72 E-value=0.26 Score=55.08 Aligned_cols=64 Identities=19% Similarity=0.176 Sum_probs=42.4
Q ss_pred HHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 79 DMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+-|+.|+++|+|+|=| |+... -....|.- ...+..+|.+-. .+-|+++|++|.++||+
T Consensus 242 ~~kLdYLk~LGvt~I~L~Pif~s-~~~~GYd~----------------~dy~~idp~~Gt---~~df~~LV~~aH~~GI~ 301 (645)
T 4aef_A 242 KEKIDHLVNLGINAIYLTPIFSS-LTYHGYDI----------------VDYFHVARRLGG---DRAFVDLLSELKRFDIK 301 (645)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEE-SSTTCSSE----------------EEEEEECGGGTC---HHHHHHHHHHHHHTTCE
T ss_pred HHhhHHHHHcCCCEEEECCCCCC-CCCCCcCc----------------cCCCccCcccCC---HHHHHHHHHHhhhcCCE
Confidence 34478899999999999 55221 11111210 011344565543 46799999999999999
Q ss_pred EEEec
Q 008330 158 VILDN 162 (570)
Q Consensus 158 VILD~ 162 (570)
||||+
T Consensus 302 VIlD~ 306 (645)
T 4aef_A 302 VILDG 306 (645)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99995
|
| >2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} | Back alignment and structure |
|---|
Probab=89.58 E-value=0.32 Score=53.29 Aligned_cols=70 Identities=16% Similarity=0.155 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 77 PMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
.+.+-++.|+++|||+|=| |+.........|.. ...+..+|.+.. .+-|+++|++|.++|
T Consensus 32 gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~----------------~dy~~id~~~Gt---~~d~~~lv~~~h~~G 92 (555)
T 2ze0_A 32 GIIEKLDYLVELGVDIVWICPIYRSPNADNGYDI----------------SDYYAIMDEFGT---MDDFDELLAQAHRRG 92 (555)
T ss_dssp HHHHTHHHHHHHTCCEEEECCCEECCCTTTTCSC----------------SEEEEECGGGCC---HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCEEEeCCcccCCCCCCCcCc----------------ccccccCcccCC---HHHHHHHHHHHHHCC
Confidence 3456688999999999999 55321110111210 011234565532 577999999999999
Q ss_pred CEEEEec---CCC
Q 008330 156 VMVILDN---HIS 165 (570)
Q Consensus 156 l~VILD~---H~~ 165 (570)
|+||||+ |..
T Consensus 93 i~vilD~V~NH~~ 105 (555)
T 2ze0_A 93 LKVILDLVINHTS 105 (555)
T ss_dssp CEEEEEEECSBCC
T ss_pred CEEEEEEeccccc
Confidence 9999994 654
|
| >1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=89.50 E-value=0.33 Score=53.43 Aligned_cols=69 Identities=13% Similarity=0.187 Sum_probs=44.8
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|=| |+.........|.. ...+..+|.+.. .+-|+++|++|.++||
T Consensus 47 i~~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~----------------~dy~~idp~~Gt---~~df~~lv~~aH~~Gi 107 (570)
T 1m53_A 47 IIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDI----------------SNYRQIMKEYGT---MEDFDSLVAEMKKRNM 107 (570)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEECCCTTTTSSC----------------SEEEEECGGGCC---HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCCCCc----------------ccccccCcccCC---HHHHHHHHHHHHHCCC
Confidence 445578999999999999 45321110111210 011234565542 5779999999999999
Q ss_pred EEEEec---CCC
Q 008330 157 MVILDN---HIS 165 (570)
Q Consensus 157 ~VILD~---H~~ 165 (570)
+||||+ |..
T Consensus 108 ~VilD~V~NH~s 119 (570)
T 1m53_A 108 RLMIDVVINHTS 119 (570)
T ss_dssp EEEEEECCSBCC
T ss_pred EEEEEEeccccc
Confidence 999994 654
|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=89.35 E-value=0.35 Score=51.66 Aligned_cols=69 Identities=17% Similarity=0.195 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 77 PMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
.+.+-++.|+++|||+|=| |+... -.+..|.. ...+..+|.+.. .+-|+++|++|.++|
T Consensus 51 gi~~~LdyL~~LGv~~I~l~Pi~~~-~~~~gY~~----------------~dy~~idp~~Gt---~~df~~lv~~~h~~G 110 (475)
T 2z1k_A 51 GVAEKLPYLLDLGVEAIYLNPVFAS-TANHRYHT----------------VDYFQVDPILGG---NEALRHLLEVAHAHG 110 (475)
T ss_dssp HHHHTHHHHHHHTCCEEEECCCEEE-SSTTCCSE----------------EEEEEECGGGTC---HHHHHHHHHHHHHTT
T ss_pred HHHHHhHHHHHcCCCEEEECCCcCC-CCCCCcCC----------------CCcCccCcccCC---HHHHHHHHHHHHHCC
Confidence 3556688999999999999 45221 11111210 011344565532 578999999999999
Q ss_pred CEEEEec---CCC
Q 008330 156 VMVILDN---HIS 165 (570)
Q Consensus 156 l~VILD~---H~~ 165 (570)
|+||||+ |..
T Consensus 111 i~VilD~V~NH~~ 123 (475)
T 2z1k_A 111 VRVILDGVFNHTG 123 (475)
T ss_dssp CEEEEEECCSBCC
T ss_pred CEEEEEEeccccc
Confidence 9999995 754
|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A | Back alignment and structure |
|---|
Probab=89.34 E-value=0.35 Score=51.96 Aligned_cols=68 Identities=19% Similarity=0.241 Sum_probs=45.0
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|=| |+... -.+..|.. ...+..+|.+. -.+.|+++|++|.++||
T Consensus 58 i~~~LdyL~~LGv~~I~L~Pi~~~-~~~~GYd~----------------~dy~~idp~~G---t~~df~~Lv~~aH~~Gi 117 (488)
T 2wc7_A 58 IMEDLDYIQNLGINAIYFTPIFQS-ASNHRYHT----------------HDYYQVDPMLG---GNEAFKELLDAAHQRNI 117 (488)
T ss_dssp HHHTHHHHHHHTCCEEEESCCEEE-CTTCTTSE----------------EEEEEECGGGT---HHHHHHHHHHHHHHTTC
T ss_pred HHHhhHHHHHcCCCEEEECCCCCC-CCCCCCCC----------------cCccccCcccC---CHHHHHHHHHHHHHCCC
Confidence 456688999999999999 44221 01111210 01133455543 35789999999999999
Q ss_pred EEEEec---CCC
Q 008330 157 MVILDN---HIS 165 (570)
Q Consensus 157 ~VILD~---H~~ 165 (570)
+||||+ |..
T Consensus 118 ~VilD~V~NH~s 129 (488)
T 2wc7_A 118 KVVLDGVFNHSS 129 (488)
T ss_dssp EEEEEECCSBCC
T ss_pred EEEEEeCCCcCC
Confidence 999995 654
|
| >1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* | Back alignment and structure |
|---|
Probab=89.00 E-value=0.28 Score=52.62 Aligned_cols=90 Identities=18% Similarity=0.207 Sum_probs=54.7
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChH-HHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccC
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPM-DMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGG 127 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~-~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g 127 (570)
.++.|.+++..|. -+.+ ++.++.|+++|||+|=| |+....-.+. ..+. .|.. +.
T Consensus 8 ~~~~~i~~~F~w~------------~~gi~~~~ldyL~~LGv~~I~l~Pi~~~~~~~~-------~~~~--~gYd---~~ 63 (471)
T 1jae_A 8 SGRNSIVHLFEWK------------WNDIADECERFLQPQGFGGVQISPPNEYLVADG-------RPWW--ERYQ---PV 63 (471)
T ss_dssp TTCEEEEEETTCC------------HHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTT-------CCGG--GGGS---BC
T ss_pred CCCCeEEEEecCC------------HHHHHHHHHHHHHHcCCCEEEeCccccccCCCC-------CCcc--cccc---cc
Confidence 4667778887773 1223 33468889999999999 4432211000 0000 0000 01
Q ss_pred cccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEe---cCCCC
Q 008330 128 IQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILD---NHISK 166 (570)
Q Consensus 128 ~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD---~H~~~ 166 (570)
.|..+|.+- -.+.|+++|++|.++||+|||| +|...
T Consensus 64 dy~idp~~G---t~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (471)
T 1jae_A 64 SYIINTRSG---DESAFTDMTRRCNDAGVRIYVDAVINHMTG 102 (471)
T ss_dssp CSCSEETTE---EHHHHHHHHHHHHHTTCEEEEEECCSBCCS
T ss_pred cccccCCCC---CHHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 145566653 3678999999999999999999 46543
|
| >1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=88.89 E-value=0.33 Score=53.24 Aligned_cols=69 Identities=9% Similarity=0.127 Sum_probs=44.5
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|=| |+.........|.. ...+..+|.+.. .+-|+++|++|.++||
T Consensus 33 i~~~ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~----------------~dy~~id~~~Gt---~~df~~lv~~~h~~Gi 93 (558)
T 1uok_A 33 IISKLDYLKELGIDVIWLSPVYESPNDDNGYDI----------------SDYCKIMNEFGT---MEDWDELLHEMHERNM 93 (558)
T ss_dssp HHTTHHHHHHHTCCEEEECCCEECCCTTTTSSC----------------SEEEEECGGGCC---HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCCCCc----------------ccccccCcccCC---HHHHHHHHHHHHHCCC
Confidence 344578999999999999 45321110111210 011234565532 5779999999999999
Q ss_pred EEEEec---CCC
Q 008330 157 MVILDN---HIS 165 (570)
Q Consensus 157 ~VILD~---H~~ 165 (570)
+||||+ |..
T Consensus 94 ~VilD~V~NH~s 105 (558)
T 1uok_A 94 KLMMDLVVNHTS 105 (558)
T ss_dssp EEEEEECCSBCC
T ss_pred EEEEEEeccccc
Confidence 999994 654
|
| >1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* | Back alignment and structure |
|---|
Probab=88.62 E-value=0.72 Score=49.44 Aligned_cols=94 Identities=17% Similarity=0.156 Sum_probs=54.6
Q ss_pred CEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEe-ccccccc-ccCccccchhhhhhhhccchhhccCcc
Q 008330 52 HRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLA-TNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 52 ~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~-~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
+.|.+++..|.-. .+|-+-+.+.+-++.|+++|||+|=| |+....- ....|... + +-. .+-+
T Consensus 6 ~~vi~q~f~w~~~-----~~gG~~~gi~~~LdyL~~LGvt~IwL~Pi~~~~~~~~~GY~~~---d-y~~-------~~~~ 69 (485)
T 1wpc_A 6 NGTMMQYFEWYLP-----NDGNHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAY---D-LYD-------LGEF 69 (485)
T ss_dssp CCCEEECCCTTCC-----SSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEE---E-TTC-------SSCS
T ss_pred CceEEEEEecCCC-----CCCCcHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCCCee---c-ccc-------cccc
Confidence 4456777777432 12212234556678999999999999 5532110 00012100 0 000 0000
Q ss_pred ----cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEe---cCC
Q 008330 130 ----SNNPSIVDLPLIKAFQAVVASLGNNNVMVILD---NHI 164 (570)
Q Consensus 130 ----~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD---~H~ 164 (570)
..+|.+-. .+-|+++|++|.++||+|||| +|.
T Consensus 70 ~q~~~idp~~Gt---~~df~~Lv~~aH~~Gi~VilD~V~NH~ 108 (485)
T 1wpc_A 70 NQKGTVRTKYGT---RSQLQAAVTSLKNNGIQVYGDVVMNHK 108 (485)
T ss_dssp CBTTBSSCSSCC---HHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred cccCccCCCCCC---HHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 24666543 578999999999999999999 476
|
| >3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* | Back alignment and structure |
|---|
Probab=88.44 E-value=0.48 Score=52.38 Aligned_cols=69 Identities=10% Similarity=0.073 Sum_probs=45.4
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|=| |+.........|.. ...+..+|.+.. .+-|+++|++|.++||
T Consensus 42 i~~~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~----------------~dy~~id~~~Gt---~~df~~lv~~~h~~Gi 102 (589)
T 3aj7_A 42 IASKLEYIKELGADAIWISPFYDSPQDDMGYDI----------------ANYEKVWPTYGT---NEDCFALIEKTHKLGM 102 (589)
T ss_dssp HHHTHHHHHHHTCSEEEECCCEECCCTTTTSSC----------------SEEEEECTTTCC---HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCCcCc----------------ccccccccccCC---HHHHHHHHHHHHHCCC
Confidence 445578999999999998 45321100101210 011345676643 5779999999999999
Q ss_pred EEEEec---CCC
Q 008330 157 MVILDN---HIS 165 (570)
Q Consensus 157 ~VILD~---H~~ 165 (570)
+||||+ |..
T Consensus 103 ~VilD~V~NH~~ 114 (589)
T 3aj7_A 103 KFITDLVINHCS 114 (589)
T ss_dssp EEEEEECCSBCC
T ss_pred EEEEEecccccc
Confidence 999994 654
|
| >1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* | Back alignment and structure |
|---|
Probab=88.40 E-value=0.65 Score=49.21 Aligned_cols=97 Identities=11% Similarity=0.109 Sum_probs=57.2
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEe-ccccccccc--Cccccchhhhhhhhccchhhcc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLATN--DSLASLTVRQSFQKLGLLEAIG 126 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~--~~~~n~tv~~s~~~lg~~~~~~ 126 (570)
.++.|.+....|.-. +.|-+-+.+.+-++.|+++|||+|=| |+....-.. ..|... ++.. .
T Consensus 7 ~~~~viyq~f~w~~~-----~~G~~~~gi~~~Ldyl~~lGvt~I~l~Pi~~~~~~~~~~gY~~~----dy~~-------l 70 (435)
T 1mxg_A 7 EEGGVIMQAFYWDVP-----GGGIWWDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPY----DYFD-------L 70 (435)
T ss_dssp GGTCCEEECCCTTCC-----CSSCHHHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEE----ETTC-------S
T ss_pred cCCcEEEEEEEeccC-----CCCCHHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCCcCcc----cccc-------c
Confidence 456666777777421 23431245666788999999999999 443221100 012100 0000 0
Q ss_pred Ccc----cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEe---cCCC
Q 008330 127 GIQ----SNNPSIVDLPLIKAFQAVVASLGNNNVMVILD---NHIS 165 (570)
Q Consensus 127 g~~----~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD---~H~~ 165 (570)
|.+ ..+|.+- -.+.|+++|++|.++||+|||| +|..
T Consensus 71 g~~~~~~~id~~~G---t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 71 GEYYQKGTVETRFG---SKEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp SCSCBTTBSSCSSC---CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred ccccccCcCCCCCC---CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 111 2455553 3577999999999999999999 4765
|
| >2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* | Back alignment and structure |
|---|
Probab=88.16 E-value=0.46 Score=52.72 Aligned_cols=69 Identities=10% Similarity=0.119 Sum_probs=44.4
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccC-ccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATND-SLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~-~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
+.+.++.|+++|+|+|=| |+....-... .|.. ...+..+|.+. -.+-|+++|++|.++|
T Consensus 146 i~~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~----------------~~y~~~~~~~G---t~~d~~~lv~~~H~~G 206 (602)
T 2bhu_A 146 AAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDG----------------AAFYAPYAPYG---RPEDLMALVDAAHRLG 206 (602)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTC----------------CEEEEECGGGC---CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEECChhhccCCCCCCccc----------------ccCcccCcCCC---CHHHHHHHHHHHHHCC
Confidence 345578999999999998 5532110000 1110 01123455543 2678999999999999
Q ss_pred CEEEEec---CCC
Q 008330 156 VMVILDN---HIS 165 (570)
Q Consensus 156 l~VILD~---H~~ 165 (570)
|+||||+ |..
T Consensus 207 i~VilD~V~NH~~ 219 (602)
T 2bhu_A 207 LGVFLDVVYNHFG 219 (602)
T ss_dssp CEEEEEECCSCCC
T ss_pred CEEEEEecccccc
Confidence 9999995 654
|
| >3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A | Back alignment and structure |
|---|
Probab=87.81 E-value=0.75 Score=51.40 Aligned_cols=66 Identities=14% Similarity=0.192 Sum_probs=43.8
Q ss_pred HHHHHHHHHHcCCcEEEe-ccccccc--ccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLA--TNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~--~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
+.+-++.|+++|||+|=| |+....- ....|. ....+..+|.+.. ++-|+++|++|.++
T Consensus 108 i~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~----------------~~dy~~vdp~~Gt---~~df~~Lv~~aH~~ 168 (644)
T 3czg_A 108 VAERVPYLQELGVRYLHLLPFLRARAGDNDGGFA----------------VSDYGQVEPSLGS---NDDLVALTSRLREA 168 (644)
T ss_dssp HHHTHHHHHHHTCCEEEECCCBCBCSSCCTTTTS----------------BSCTTSBCGGGCC---HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcC----------------cccccccCcccCC---HHHHHHHHHHHHHC
Confidence 455578999999999999 5543211 001111 0112344666542 67899999999999
Q ss_pred CCEEEEec
Q 008330 155 NVMVILDN 162 (570)
Q Consensus 155 Gl~VILD~ 162 (570)
||+||||+
T Consensus 169 GI~VilD~ 176 (644)
T 3czg_A 169 GISLCADF 176 (644)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEE
Confidence 99999994
|
| >1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* | Back alignment and structure |
|---|
Probab=87.76 E-value=0.79 Score=51.06 Aligned_cols=66 Identities=15% Similarity=0.258 Sum_probs=44.5
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccc--cCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLAT--NDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~--~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
+.+-++.|+++|||+|=| |+....-. ...|. ....+..+|.+.. .+-|+++|++|.++
T Consensus 115 i~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~----------------v~dy~~vdp~~Gt---~~d~~~Lv~~ah~~ 175 (628)
T 1g5a_A 115 LKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYA----------------VSSYRDVNPALGT---IGDLREVIAALHEA 175 (628)
T ss_dssp HHTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTS----------------CSCSSSBCTTTCC---HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcC----------------CcccCCcCccCCC---HHHHHHHHHHHHHC
Confidence 445578999999999999 55332100 00111 0112356777643 67899999999999
Q ss_pred CCEEEEec
Q 008330 155 NVMVILDN 162 (570)
Q Consensus 155 Gl~VILD~ 162 (570)
||+||+|+
T Consensus 176 GI~VilD~ 183 (628)
T 1g5a_A 176 GISAVVDF 183 (628)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEE
Confidence 99999995
|
| >1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* | Back alignment and structure |
|---|
Probab=87.01 E-value=0.69 Score=52.05 Aligned_cols=75 Identities=15% Similarity=0.131 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 77 PMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
.+.+-++.|+++|||+|=| |+....-.+..... .+ ..|.. ....+..+|.+-. ++-|+++|++|.++|
T Consensus 53 gi~~kLdyLk~LGv~aIwL~Pi~~~~~~~~~~g~----~~--~~GYd--~~Dy~~idp~~Gt---~~df~~Lv~~aH~~G 121 (686)
T 1qho_A 53 GVRQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDN----TG--YHGYW--TRDFKQIEEHFGN---WTTFDTLVNDAHQNG 121 (686)
T ss_dssp HHHHTHHHHHHHTCCEEEECCCEEECSSCSSTTC----CC--TTSCS--EEEEEEECTTTCC---HHHHHHHHHHHHHTT
T ss_pred HHHHhhHHHHhcCCCEEEECccccCCcccccCCC----CC--cCCcC--cccccccCcccCC---HHHHHHHHHHHHHCC
Confidence 4556678999999999999 55321100000000 00 00000 0012445777643 678999999999999
Q ss_pred CEEEEec
Q 008330 156 VMVILDN 162 (570)
Q Consensus 156 l~VILD~ 162 (570)
|+||||+
T Consensus 122 ikVilD~ 128 (686)
T 1qho_A 122 IKVIVDF 128 (686)
T ss_dssp CEEEEEE
T ss_pred CEEEEEe
Confidence 9999994
|
| >1dqg_A Mannose receptor; beta trefoil, multilectin receptor, pituitary hormones, sulfated carbohydrate, sugar binding protein; 1.70A {Mus musculus} SCOP: b.42.2.2 PDB: 1dqo_A* 1fwu_A* 1fwv_A* | Back alignment and structure |
|---|
Probab=86.97 E-value=0.43 Score=42.35 Aligned_cols=50 Identities=20% Similarity=0.321 Sum_probs=39.5
Q ss_pred ceeecccceEEeeccCCccceeccccC--CCCCceeEeecccc-EEEEecCCCceEEEeec
Q 008330 450 TISLKGAYFCLQAKHVGKPAKLGIICT--DCGSTWEIISDSKM-HLSSKADNGTTVCLDVD 507 (570)
Q Consensus 450 ~~~~~~~~~cl~a~~~g~~~~~~~~c~--~~~~~W~~~s~~~~-~~~~~~~~~~~~cld~~ 507 (570)
.|.-.+.++||+|... .+++..+|. ++.|+|+=+|+..| || ++.+||=+.
T Consensus 7 ~I~~e~~~~Cl~a~~~--~~v~~~~C~~~s~~q~WkWvS~~rLfnl------gs~~CLGl~ 59 (135)
T 1dqg_A 7 LIYNEDHKRCVDALSA--ISVQTATCNPEAESQKFRWVSDSQIMSV------AFKLCLGVP 59 (135)
T ss_dssp CEEETTTTEEEEEEET--TEEEEESCCTTCGGGCEEESSSSCEEET------TTTEEEECS
T ss_pred EEEECCCCceeeecCc--cEEEeccCCCCChhheEEEeccCceecc------CcCcccccC
Confidence 3444688999999965 356656999 55799999999997 53 789999994
|
| >3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A | Back alignment and structure |
|---|
Probab=86.45 E-value=0.63 Score=51.08 Aligned_cols=68 Identities=15% Similarity=0.161 Sum_probs=44.3
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccC--ccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATND--SLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~--~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
+.+.++.|+++|||+|-| |+.... ... .|.. ...+..+|.+. -.+.|+++|++|.++
T Consensus 121 ~~~~l~~l~~lG~~~v~l~Pi~~~~-~~~~~GY~~----------------~~~~~~~~~~G---t~~d~~~lv~~~h~~ 180 (558)
T 3vgf_A 121 VIRKLDYLKDLGITAIEIMPIAQFP-GKRDWGYDG----------------VYLYAVQNSYG---GPEGFRKLVDEAHKK 180 (558)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEECS-SSCCCSTTC----------------CEEEEECGGGT---HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCcEEEECCcccCC-CCCCcCccc----------------ccccccccccC---CHHHHHHHHHHHHHc
Confidence 456678999999999998 443211 110 0110 01123344442 357899999999999
Q ss_pred CCEEEEec---CCC
Q 008330 155 NVMVILDN---HIS 165 (570)
Q Consensus 155 Gl~VILD~---H~~ 165 (570)
||.||||+ |..
T Consensus 181 Gi~VilD~V~NH~~ 194 (558)
T 3vgf_A 181 GLGVILDVVYNHVG 194 (558)
T ss_dssp TCEEEEEECCSCCC
T ss_pred CCEEEEEEeecccc
Confidence 99999996 665
|
| >3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* | Back alignment and structure |
|---|
Probab=85.74 E-value=0.93 Score=52.17 Aligned_cols=114 Identities=11% Similarity=0.077 Sum_probs=59.4
Q ss_pred CCCeEecCCeEEcC--CCCEEEEEEee-CCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEe-cccccccccCccccch
Q 008330 36 GLPLSTNSRWIVDE--NGHRVKLACVN-WVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLT 111 (570)
Q Consensus 36 ~~~L~t~G~~IVd~--~G~~v~L~GVN-w~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~t 111 (570)
+..-+++|.++... -++.|...|.. |.++.. .+.++..+.+.+-++.|+++||++|=| |+....... .+
T Consensus 592 s~~~~~~~~~~~~~~~~~~~ViYe~f~~~~s~~~--~g~~~~~~gi~~~l~yLk~LGvt~I~L~Pi~~~~~~~-~~---- 664 (844)
T 3aie_A 592 STAPSTDGKSVHQNAALDSRVMFEGFSNFQAFAT--KKEEYTNVVIAKNVDKFAEWGVTDFEMAPQYVSSTDG-SF---- 664 (844)
T ss_dssp CCSBCCSSCSSCCSHHHHTCCEEECCCTTCCCCS--SGGGCHHHHHHHTHHHHHHTTCCEEECCCCSCBCCCC-SS----
T ss_pred cccccCCCcccccCCccCceEEEEeCCCcccCCC--CCCcccHHHHHHHHHHHHHCCCCeEEECCcccCCCCC-cc----
Confidence 33344455554322 23456666655 433322 112221144566789999999999998 553221110 00
Q ss_pred hhhhhhhccchhhccCcccCC----CCCCCchHHHHHHHHHHHHhcCCCEEEEec
Q 008330 112 VRQSFQKLGLLEAIGGIQSNN----PSIVDLPLIKAFQAVVASLGNNNVMVILDN 162 (570)
Q Consensus 112 v~~s~~~lg~~~~~~g~~~~n----P~~~~~t~l~~ld~vV~~a~~~Gl~VILD~ 162 (570)
..+....|.. ....+..+ |.+. -.+-|+++|++|.++||.||||+
T Consensus 665 -~~~~~~~GY~--~~d~~~i~es~~~~~G---t~~df~~lv~~~H~~GI~VilD~ 713 (844)
T 3aie_A 665 -LDSVIQNGYA--FTDRYDLGISKPNKYG---TADDLVKAIKALHSKGIKVMADW 713 (844)
T ss_dssp -GGGTTTCSSS--BSCTTCSSCSSCBTTB---CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred -ccccCCCCCc--cccCccCCCCCCCCCC---CHHHHHHHHHHHHHCCCEEEEEE
Confidence 0000000100 00112233 3332 36789999999999999999995
|
| >2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9 | Back alignment and structure |
|---|
Probab=85.72 E-value=14 Score=36.78 Aligned_cols=122 Identities=15% Similarity=0.250 Sum_probs=78.8
Q ss_pred ChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 76 QPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
..+..+++.++++||.-| +-++.--+. +...++.|+..++ .++...+.|..|.+.|
T Consensus 108 ~~~g~~Le~lk~~Gf~Gv-~N~ptvgli-----dG~fr~~LEE~gm------------------~~~~eve~I~~A~~~g 163 (286)
T 2p10_A 108 MVMSTFLRELKEIGFAGV-QNFPTVGLI-----DGLFRQNLEETGM------------------SYAQEVEMIAEAHKLD 163 (286)
T ss_dssp CCHHHHHHHHHHHTCCEE-EECSCGGGC-----CHHHHHHHHHTTC------------------CHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHhCCceE-EECCCcccc-----cchhhhhHhhcCC------------------CHHHHHHHHHHHHHCC
Confidence 457889999999999999 877643222 1234455543332 3567889999999999
Q ss_pred CEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEecc---CCCCCCC--CChhHHHHHH
Q 008330 156 VMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLR---NELRGPK--QNVKDWYRYM 230 (570)
Q Consensus 156 l~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~---NEP~~~~--~~~~~W~~~~ 230 (570)
|..+.-. +++++.. +||+ -.|.++..++- -|-.+.. -+.++=..++
T Consensus 164 L~Ti~~v----------------------~~~eeA~----amA~---agpDiI~~h~glT~gglIG~~~avs~~~~~e~i 214 (286)
T 2p10_A 164 LLTTPYV----------------------FSPEDAV----AMAK---AGADILVCHMGLTTGGAIGARSGKSMDDCVSLI 214 (286)
T ss_dssp CEECCEE----------------------CSHHHHH----HHHH---HTCSEEEEECSCC---------CCCHHHHHHHH
T ss_pred CeEEEec----------------------CCHHHHH----HHHH---cCCCEEEECCCCCCCCcccCCCcccHHHhHHHH
Confidence 9987631 3445443 2332 24556666643 1322321 1345556788
Q ss_pred HHHHHHHHhcCCCcEEEEeC
Q 008330 231 QLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 231 ~~~~~aIr~~dp~~lIiVeG 250 (570)
+++++++++++|+.+|+..|
T Consensus 215 ~~i~~a~~~vnpdvivLc~g 234 (286)
T 2p10_A 215 NECIEAARTIRDDIIILSHG 234 (286)
T ss_dssp HHHHHHHHHHCSCCEEEEES
T ss_pred HHHHHHHHHhCCCcEEEecC
Confidence 99999999999999999976
|
| >1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* | Back alignment and structure |
|---|
Probab=85.46 E-value=0.78 Score=51.15 Aligned_cols=69 Identities=19% Similarity=0.134 Sum_probs=43.7
Q ss_pred HHHHHHHHHHcCCcEEEe-ccccccccc--C----ccccchhhhhhhhccchhhccCcccCCCCCCC-----chHHHHHH
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATN--D----SLASLTVRQSFQKLGLLEAIGGIQSNNPSIVD-----LPLIKAFQ 145 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~--~----~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~-----~t~l~~ld 145 (570)
+.+.++.|+++|+|+|-| |+....-.. . .|.. ...+..+|.+.. ....+.|+
T Consensus 122 ~~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~g~~~~gY~~----------------~~~~~~~~~~g~~~~~~~~~~~~~~ 185 (637)
T 1gjw_A 122 MMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSV----------------KNPMELDERYHDPLLEPFKVDEEFK 185 (637)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSE----------------EEEEEECGGGSCGGGTTSCHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCCCeecccccccCCCCCccCC----------------CCcCCcCcccCCCcccccchHHHHH
Confidence 567789999999999998 553221100 0 0110 011223333321 12378899
Q ss_pred HHHHHHhcCCCEEEEec
Q 008330 146 AVVASLGNNNVMVILDN 162 (570)
Q Consensus 146 ~vV~~a~~~Gl~VILD~ 162 (570)
++|++|.++||.||||+
T Consensus 186 ~lv~~~H~~Gi~VilD~ 202 (637)
T 1gjw_A 186 AFVEACHILGIRVILDF 202 (637)
T ss_dssp HHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHCCCEEEEEE
Confidence 99999999999999994
|
| >1xez_A Hemolysin, cytolysin; pore-forming toxin, Pro-toxin, water- soluble monomer, beta-prism, beta-trefoil; HET: BOG; 2.30A {Vibrio cholerae} PDB: 3o44_A | Back alignment and structure |
|---|
Probab=85.03 E-value=0.54 Score=51.14 Aligned_cols=91 Identities=15% Similarity=0.266 Sum_probs=65.2
Q ss_pred ccceeeCCCCceeeeecCCCCceecCCCCCC---CCccccCCccee-ecccceEEeeccCCccceeccccC-CCCCceeE
Q 008330 410 LHKVIYHPATGLCVQRKSFLDPLTLGPCTES---EAWSYTPHKTIS-LKGAYFCLQAKHVGKPAKLGIICT-DCGSTWEI 484 (570)
Q Consensus 410 ~~~~~~~~~tg~c~~~~~~~~~~~~~~c~~~---~~W~~~~~~~~~-~~~~~~cl~a~~~g~~~~~~~~c~-~~~~~W~~ 484 (570)
|-++--.-...+|+++.... .|..+.|.++ |.|.|+..+..+ ..++.+||+..+.+ .--.|+ +..|+|+-
T Consensus 465 pVnLQl~sfNnrCLdv~~~~-~ls~~~C~~~~~nQsfiyDq~gRYvSa~n~~~CLD~~~L~----~lq~C~~sLTQkW~W 539 (721)
T 1xez_A 465 PVNLQLASFNNRCIQVDAQG-RLTANMCDSQQSAQSFIYDQLGRYVSASNTKLCLDGAALD----ALQPCNQNLTQRWEW 539 (721)
T ss_dssp CEEEEETTTTTEEEEECTTC-BEEEECCCTTCGGGCEEECTTSCEEETTEEEEECCTTCTT----BCEECCSCGGGCEEE
T ss_pred ceeeeecccCCeeEEeecCc-eEEEEEcCCCCccceeeEccCCcEEEccchhhccccCchh----hhhhccCCccceEEE
Confidence 44565666778999997763 5999999993 799999988644 35688999998865 337899 77899999
Q ss_pred eeccccEEEEecCCCceEEEeec
Q 008330 485 ISDSKMHLSSKADNGTTVCLDVD 507 (570)
Q Consensus 485 ~s~~~~~~~~~~~~~~~~cld~~ 507 (570)
+.++. .|+... .+++|--|..
T Consensus 540 ~~~~d-~LkN~~-~~~~Lghdk~ 560 (721)
T 1xez_A 540 RKGTD-ELTNVY-SGESLGHDKQ 560 (721)
T ss_dssp CTTSS-CEEETT-TCCEEEEETT
T ss_pred eCCCC-cceecc-CCeeecccCc
Confidence 66664 244332 2455555554
|
| >4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} | Back alignment and structure |
|---|
Probab=85.01 E-value=0.81 Score=51.58 Aligned_cols=65 Identities=14% Similarity=0.182 Sum_probs=43.0
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|=| |+.... ....|.. ...+..+|.+-. .+.|+++|++|.++||
T Consensus 267 i~~kLdyLk~LGvt~IwL~Pi~~s~-~~~GYd~----------------~Dy~~idp~~Gt---~~df~~Lv~~aH~~Gi 326 (696)
T 4aee_A 267 IMKHIDHLEDLGVETIYLTPIFSST-SYHRYDT----------------IDYKSIDKYLGT---MEDFEKLVQVLHSRKI 326 (696)
T ss_dssp HHTTHHHHHHHTCCEEEECCCEEES-SSSCCSE----------------EEEEEECGGGCC---HHHHHHHHHHHHHTTC
T ss_pred HHHHhHHHHHcCCCEEEECCcccCC-CCCCcCc----------------ccccccCcccCC---HHHHHHHHHHHHHCCC
Confidence 345588999999999999 553210 1111210 011344565543 5779999999999999
Q ss_pred EEEEec
Q 008330 157 MVILDN 162 (570)
Q Consensus 157 ~VILD~ 162 (570)
+||||+
T Consensus 327 kVilD~ 332 (696)
T 4aee_A 327 KIVLDI 332 (696)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 999994
|
| >2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A | Back alignment and structure |
|---|
Probab=84.84 E-value=1.4 Score=49.97 Aligned_cols=79 Identities=18% Similarity=0.222 Sum_probs=44.1
Q ss_pred HHHHHHHcCCcEEEe-cccccccccCccccchhhhhh-hhccchhhccCcccCCCCCCC----chHHHHHHHHHHHHhcC
Q 008330 81 LSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSF-QKLGLLEAIGGIQSNNPSIVD----LPLIKAFQAVVASLGNN 154 (570)
Q Consensus 81 ~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~-~~lg~~~~~~g~~~~nP~~~~----~t~l~~ld~vV~~a~~~ 154 (570)
.++.|+++|||+|=| |+.... ..+ ......+ ...|.. ....+..+|.+.. ...++.|+++|++|.++
T Consensus 207 ~l~yLk~LGvt~I~L~Pi~~~~-~~~----~~~~~g~~~~wGY~--~~~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H~~ 279 (718)
T 2vr5_A 207 MISYLKDLGITTVELMPVFHFI-DQR----FLTDKGLTNYWGYD--PINFFSPECRYSSTGCLGGQVLSFKKMVNELHNA 279 (718)
T ss_dssp HHHHHHHHTCCEEEECCCBCBC-CCH----HHHTTTCCCSSCCC--BSCSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHcCCCeEEEeCCEecC-ccc----cccccCCcCccCcC--cccCcccChhhcCCCCCCchHHHHHHHHHHHHHC
Confidence 489999999999998 554321 110 0000000 000000 0011223343321 13378899999999999
Q ss_pred CCEEEEec---CCCC
Q 008330 155 NVMVILDN---HISK 166 (570)
Q Consensus 155 Gl~VILD~---H~~~ 166 (570)
||.||||+ |...
T Consensus 280 Gi~VilDvV~NH~~~ 294 (718)
T 2vr5_A 280 GIEVIIDVVYNHTAE 294 (718)
T ss_dssp TCEEEEEECCSCCSS
T ss_pred CCEEEEEeccCcccC
Confidence 99999994 6543
|
| >1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=84.44 E-value=1.7 Score=49.54 Aligned_cols=27 Identities=33% Similarity=0.527 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhcCCCEEEEe---cCCCC
Q 008330 140 LIKAFQAVVASLGNNNVMVILD---NHISK 166 (570)
Q Consensus 140 ~l~~ld~vV~~a~~~Gl~VILD---~H~~~ 166 (570)
..+.|+++|++|.++||.|||| +|...
T Consensus 271 ~~~efk~lV~~~H~~Gi~VilDvV~NH~~~ 300 (750)
T 1bf2_A 271 PTAEFQAMVQAFHNAGIKVYMDVVYNHTAE 300 (750)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSSCTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 4788999999999999999999 46543
|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A | Back alignment and structure |
|---|
Probab=84.40 E-value=0.91 Score=47.75 Aligned_cols=81 Identities=14% Similarity=0.162 Sum_probs=45.5
Q ss_pred ChHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 76 QPMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
+.+.+-++.|+++|||+|=| |+... ...+. .......+ ..|.. ....+..+|.+- -.+.|+++|++|.++
T Consensus 17 ~~i~~~l~yl~~lG~~~i~l~Pi~~~-~~~~~-~~~~~~~~--~~gY~--~~~y~~~~~~~G---~~~d~~~lv~~~h~~ 87 (422)
T 1ua7_A 17 NTLKHNMKDIHDAGYTAIQTSPINQV-KEGNQ-GDKSMSNW--YWLYQ--PTSYQIGNRYLG---TEQEFKEMCAAAEEY 87 (422)
T ss_dssp HHHHHTHHHHHHTTCSEEEECCCEEE-CCTGG-GCCBGGGG--GGGGC--EEEEEEEETTTE---EHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEeCCcccc-ccCCc-CcCccCCc--ccccc--ceeeeccCCCCC---CHHHHHHHHHHHHHC
Confidence 34556678999999999998 54321 11100 00000000 00000 001123355542 367899999999999
Q ss_pred CCEEEEec---CCC
Q 008330 155 NVMVILDN---HIS 165 (570)
Q Consensus 155 Gl~VILD~---H~~ 165 (570)
||+||||+ |..
T Consensus 88 Gi~VilD~V~NH~~ 101 (422)
T 1ua7_A 88 GIKVIVDAVINHTT 101 (422)
T ss_dssp TCEEEEEECCSBCC
T ss_pred CCEEEEEeccCccc
Confidence 99999994 654
|
| >1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... | Back alignment and structure |
|---|
Probab=84.08 E-value=0.94 Score=50.94 Aligned_cols=79 Identities=19% Similarity=0.177 Sum_probs=45.0
Q ss_pred ChHHHHHH--HHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHh
Q 008330 76 QPMDMLSK--RVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLG 152 (570)
Q Consensus 76 ~~~~~~~~--~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~ 152 (570)
+.+.+-++ .|+++|||+|=| |+....-..... +.....+ ..|.. ....+..+|.+-. .+-|+++|++|.
T Consensus 55 ~gi~~kLd~~yLk~LGvt~IwL~Pi~~~~~~~~~~-~g~~~~~--~~GYd--~~dy~~idp~~Gt---~~dfk~Lv~~aH 126 (686)
T 1d3c_A 55 QGIINKINDGYLTGMGVTAIWISQPVENIYSIINY-SGVNNTA--YHGYW--ARDFKKTNPAYGT---IADFQNLIAAAH 126 (686)
T ss_dssp HHHHHHHHTTTTGGGTCCEEEECCCEEECCCCEES-SSCEECC--TTSCS--EEEEEEECTTTCC---HHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHhcCCCEEEeCCcccCCcccccc-cCccCCC--CCCCC--cccccccCcccCC---HHHHHHHHHHHH
Confidence 34556678 888999999999 553211000000 0000000 00000 0012355777643 678999999999
Q ss_pred cCCCEEEEec
Q 008330 153 NNNVMVILDN 162 (570)
Q Consensus 153 ~~Gl~VILD~ 162 (570)
++||+||||+
T Consensus 127 ~~GI~VilD~ 136 (686)
T 1d3c_A 127 AKNIKVIIDF 136 (686)
T ss_dssp HTTCEEEEEE
T ss_pred HCCCEEEEEe
Confidence 9999999994
|
| >2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=83.97 E-value=1 Score=50.49 Aligned_cols=79 Identities=18% Similarity=0.312 Sum_probs=44.4
Q ss_pred HHHHHHHcCCcEEEe-cccccccccCccccchhhhhh-hhccchhhccCcccCCCCCCCc--hHHHHHHHHHHHHhcCCC
Q 008330 81 LSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSF-QKLGLLEAIGGIQSNNPSIVDL--PLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 81 ~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~-~~lg~~~~~~g~~~~nP~~~~~--t~l~~ld~vV~~a~~~Gl 156 (570)
.++.|+++|+|+|=| |+.... ..+ ... +..+ ...|.. ....+..+|.+... .-.+.|+++|++|.++||
T Consensus 184 ~l~yL~~LGvt~i~L~Pi~~~~-~~~---~~~-~~g~~~~wGY~--~~~y~~~~~~~G~~p~~~~~d~~~lv~~~H~~Gi 256 (657)
T 2wsk_A 184 MINYLKQLGITALELLPVAQFA-SEP---RLQ-RMGLSNYWGYN--PVAMFALHPAYACSPETALDEFRDAIKALHKAGI 256 (657)
T ss_dssp HHHHHHHHTCCEEEESCCEEEC-CCH---HHH-TTTCCCSSCCC--EEEEEEECGGGCSSGGGHHHHHHHHHHHHHHTTC
T ss_pred chHHHHHcCCCEEEECCccccC-ccc---ccc-ccccccccCcC--cccCCCCCHHHcCCCCcCHHHHHHHHHHHHHCCC
Confidence 488999999999998 553321 110 000 0000 000000 00112334544311 247889999999999999
Q ss_pred EEEEe---cCCCC
Q 008330 157 MVILD---NHISK 166 (570)
Q Consensus 157 ~VILD---~H~~~ 166 (570)
.|||| +|...
T Consensus 257 ~VilD~V~NH~~~ 269 (657)
T 2wsk_A 257 EVILDIVLNHSAE 269 (657)
T ss_dssp EEEEEECCSCCTT
T ss_pred EEEEEEeeccccc
Confidence 99999 47653
|
| >3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* | Back alignment and structure |
|---|
Probab=83.96 E-value=1.7 Score=48.82 Aligned_cols=65 Identities=14% Similarity=0.199 Sum_probs=43.8
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|-| |+.... ....|.. ...+..+|.+.. ++.|+++|++|.++||
T Consensus 62 ~~~~l~yl~~lGv~~i~l~Pi~~~~-~~~gY~~----------------~dy~~i~~~~Gt---~~d~~~lv~~~h~~gi 121 (669)
T 3k8k_A 62 VTQKLDYLNQLGVKALWLSPIHPCM-SYHGYDV----------------TDYTKVNPQLGT---ESDFDRLVTEAHNRGI 121 (669)
T ss_dssp HHTTHHHHHTTTCSEEEECCCSSBS-STTCCSB----------------SCTTSCCTTTCC---HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEecccccCC-CCCCCCc----------------ccccccccccCC---HHHHHHHHHHHHHcCC
Confidence 455688999999999999 443211 0011110 112345666643 6779999999999999
Q ss_pred EEEEec
Q 008330 157 MVILDN 162 (570)
Q Consensus 157 ~VILD~ 162 (570)
+||||+
T Consensus 122 ~vi~D~ 127 (669)
T 3k8k_A 122 KIYLDY 127 (669)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999995
|
| >1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=83.94 E-value=0.82 Score=51.37 Aligned_cols=76 Identities=20% Similarity=0.219 Sum_probs=44.9
Q ss_pred ChHHHHHH--HHHHcCCcEEEe-ccccccccc--CccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHH
Q 008330 76 QPMDMLSK--RVVDMGFNCVRL-TWPLYLATN--DSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVAS 150 (570)
Q Consensus 76 ~~~~~~~~--~i~~~GfN~VRl-Pi~~~~~~~--~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~ 150 (570)
+.+.+-++ .|+++|+|+|=| |+....-.. + +.. . .+ ..|.. ..-.+..+|.+-. ++-|+++|++
T Consensus 52 ~gi~~kLd~~yLk~LGv~aIwL~Pi~~~~~~~~~~-~~g-~--~~--~~GY~--~~Dy~~idp~~Gt---~~df~~Lv~~ 120 (680)
T 1cyg_A 52 QGIINKINDGYLTDMGVTAIWISQPVENVFSVMND-ASG-S--AS--YHGYW--ARDFKKPNPFFGT---LSDFQRLVDA 120 (680)
T ss_dssp HHHHHHHHTSTTTTTTCCEEEECCCEEECCCCCSS-SSC-C--CS--TTSCS--EEEEEEECTTTCC---HHHHHHHHHH
T ss_pred HHHHhhcCHHHHHhCCCCEEEeCccccCccccccc-cCC-C--CC--CCCcC--chhccccCcccCC---HHHHHHHHHH
Confidence 34556688 888999999999 443211000 0 000 0 00 00000 0012455777653 6789999999
Q ss_pred HhcCCCEEEEec
Q 008330 151 LGNNNVMVILDN 162 (570)
Q Consensus 151 a~~~Gl~VILD~ 162 (570)
|.++||+||||+
T Consensus 121 aH~~GIkVilD~ 132 (680)
T 1cyg_A 121 AHAKGIKVIIDF 132 (680)
T ss_dssp HHHTTCEEEEEE
T ss_pred HHHCCCEEEEEe
Confidence 999999999994
|
| >1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=83.76 E-value=0.91 Score=48.66 Aligned_cols=68 Identities=19% Similarity=0.208 Sum_probs=44.5
Q ss_pred HHHHHHHH--------HHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHH
Q 008330 78 MDMLSKRV--------VDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVV 148 (570)
Q Consensus 78 ~~~~~~~i--------~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV 148 (570)
+.+-++.| +++|+|+|=| |+.... ....|.. ...+..+|.+-. .+-|+++|
T Consensus 29 i~~~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~-~~~GYd~----------------~dy~~idp~~Gt---~~d~~~Lv 88 (488)
T 1wza_A 29 IIEKLDYLNDGDPETIADLGVNGIWLMPIFKSP-SYHGYDV----------------TDYYKINPDYGT---LEDFHKLV 88 (488)
T ss_dssp HHHTHHHHCCSCTTCCSSCCCSEEEECCCEECS-SSSCCSC----------------SEEEEECGGGCC---HHHHHHHH
T ss_pred HHHhhhhhhccccchhhhcCccEEEECCcccCC-CCCCcCc----------------ccccccCcccCC---HHHHHHHH
Confidence 44558899 9999999999 453210 0001210 011244565532 67899999
Q ss_pred HHHhcCCCEEEEec---CCC
Q 008330 149 ASLGNNNVMVILDN---HIS 165 (570)
Q Consensus 149 ~~a~~~Gl~VILD~---H~~ 165 (570)
++|.++||+||||+ |..
T Consensus 89 ~~aH~~Gi~VilD~V~NH~s 108 (488)
T 1wza_A 89 EAAHQRGIKVIIDLPINHTS 108 (488)
T ss_dssp HHHHHTTCEEEEECCCSBCC
T ss_pred HHHHHCCCEEEEEecccccc
Confidence 99999999999994 654
|
| >3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A | Back alignment and structure |
|---|
Probab=82.69 E-value=1.2 Score=50.19 Aligned_cols=79 Identities=16% Similarity=0.130 Sum_probs=44.5
Q ss_pred hHHHHHH--HHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhc
Q 008330 77 PMDMLSK--RVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGN 153 (570)
Q Consensus 77 ~~~~~~~--~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~ 153 (570)
.+.+-++ .|+++|+|+|=| |+....-.+..+ +. ...+-...|.. ..-.+..+|.+-. .+.|+++|++|.+
T Consensus 56 gi~~kLd~~yLk~LGvtaIwL~Pi~~~~~~~~~~-~g-~~g~~~~~GYd--~~dy~~idp~~Gt---~~dfk~Lv~~aH~ 128 (683)
T 3bmv_A 56 GIINKINDGYLTGMGVTAIWIPQPVENIYAVLPD-ST-FGGSTSYHGYW--ARDFKRTNPYFGS---FTDFQNLINTAHA 128 (683)
T ss_dssp HHHHHHHTSTTGGGTCCEEEECCCEEECCCCEEE-TT-TEEECSTTSCS--EEEEEEECTTTCC---HHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHcCCCEEEeCccccCccccccc-cc-ccCCCCCCCcC--cccccccCcccCC---HHHHHHHHHHHHH
Confidence 3556678 888999999999 543211000000 00 00000000000 0011445777643 6789999999999
Q ss_pred CCCEEEEec
Q 008330 154 NNVMVILDN 162 (570)
Q Consensus 154 ~Gl~VILD~ 162 (570)
+||+||||+
T Consensus 129 ~GikVilD~ 137 (683)
T 3bmv_A 129 HNIKVIIDF 137 (683)
T ss_dssp TTCEEEEEE
T ss_pred CCCEEEEEE
Confidence 999999994
|
| >2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* | Back alignment and structure |
|---|
Probab=82.61 E-value=1.9 Score=48.74 Aligned_cols=100 Identities=21% Similarity=0.398 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHhcCCCEEEEe---cCCCC--------CCcccc-CCCCCC--CCCCCC---CC---HHHHHHHHHHHHH
Q 008330 140 LIKAFQAVVASLGNNNVMVILD---NHISK--------PGWCCS-NSDGNG--FFGDQY---FN---PDLWIKGLTKMAT 199 (570)
Q Consensus 140 ~l~~ld~vV~~a~~~Gl~VILD---~H~~~--------~~w~~~-~~dgng--~~~d~~---~~---~~~~~~~w~~iA~ 199 (570)
..+.|+++|++|.++||.|||| +|... +.|..- ..++.. .|+... .+ .+.+++..+..++
T Consensus 253 ~~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~v~~~i~d~l~~W~~ 332 (714)
T 2ya0_A 253 RIAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLVD 332 (714)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTBCSCHHHHHTTSTTTSBCBCTTCCBCEETTEEBBCTTSHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCEEEEEeccCcccCcccccccCCCeeEEeCCCCCCccccCCCCcccCCHHHHHHHHHHHHHHHH
Confidence 3688999999999999999999 46543 233211 111110 111100 11 2333444455555
Q ss_pred HhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 200 IFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 200 ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
.|. ....- ||+..+. ....| +++..++++.+|+..+|-|.
T Consensus 333 e~~-vDGfR-~D~~~~~-----~~~~~----~~~~~~~~~~~p~~~ligE~ 372 (714)
T 2ya0_A 333 TYK-VDGFR-FDMMGDH-----DAASI----EEAYKAARALNPNLIMLGEG 372 (714)
T ss_dssp HHC-CCEEE-ETTGGGS-----BHHHH----HHHHHHHHHHCTTCEEEECC
T ss_pred hhC-ceEEE-EeCCCCC-----CHHHH----HHHHHHHHHhCCCeEEEecc
Confidence 553 33443 6776532 22334 45667788899998888886
|
| >3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=82.44 E-value=1.4 Score=48.98 Aligned_cols=66 Identities=9% Similarity=0.081 Sum_probs=42.8
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccc-cCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLAT-NDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~-~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
+.+.++.|+++|||+|-| |+...... +..|.. ...+..+|.+.. .+.|+++|++|.++|
T Consensus 156 ~~~~L~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~----------------~~~~~~~~~~G~---~~~~~~lv~~~H~~G 216 (618)
T 3m07_A 156 AIAKLPYLAELGVTVIEVMPVAQFGGERGWGYDG----------------VLLYAPHSAYGT---PDDFKAFIDAAHGYG 216 (618)
T ss_dssp HHTTHHHHHHHTCCEEEECCCEECSSSCCCSTTC----------------CEEEEECTTTCC---HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEeCChhccCCCCCCCcCc----------------ccccccCcCcCC---HHHHHHHHHHHHHCC
Confidence 344578999999999998 55321100 001110 011344666543 577999999999999
Q ss_pred CEEEEec
Q 008330 156 VMVILDN 162 (570)
Q Consensus 156 l~VILD~ 162 (570)
|.||||+
T Consensus 217 i~VilD~ 223 (618)
T 3m07_A 217 LSVVLDI 223 (618)
T ss_dssp CEEEEEE
T ss_pred CEEEEee
Confidence 9999994
|
| >3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A | Back alignment and structure |
|---|
Probab=82.30 E-value=1.2 Score=50.65 Aligned_cols=67 Identities=13% Similarity=0.040 Sum_probs=43.4
Q ss_pred HHHHHHHHcCCcEEEe-ccccccccc-CccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 80 MLSKRVVDMGFNCVRL-TWPLYLATN-DSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 80 ~~~~~i~~~GfN~VRl-Pi~~~~~~~-~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
+.++.|+++|||+|=| |+....... ..|.. ...+..+|.+. -.+-|+++|++|.++||.
T Consensus 206 ~~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~----------------~dy~a~~~~~G---t~~df~~lv~~~H~~Gi~ 266 (755)
T 3aml_A 206 NVLPRIRANNYNTVQLMAIMEHSYYASFGYHV----------------TNFFAVSSRSG---TPEDLKYLVDKAHSLGLR 266 (755)
T ss_dssp HTHHHHHHTTCCEEEEESCEECSCGGGTTCSC----------------SEEEEECGGGC---CHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEECchhcCCCCCCCCCcc----------------CCCCccCCCCC---CHHHHHHHHHHHHHCCCE
Confidence 3588999999999999 443221100 00110 01123455543 257899999999999999
Q ss_pred EEEec---CCC
Q 008330 158 VILDN---HIS 165 (570)
Q Consensus 158 VILD~---H~~ 165 (570)
||||+ |..
T Consensus 267 VilD~V~NH~~ 277 (755)
T 3aml_A 267 VLMDVVHSHAS 277 (755)
T ss_dssp EEEEECCSCBC
T ss_pred EEEEEeccccc
Confidence 99994 654
|
| >3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A | Back alignment and structure |
|---|
Probab=81.27 E-value=2.1 Score=47.43 Aligned_cols=76 Identities=21% Similarity=0.281 Sum_probs=43.9
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccc--cCccccchhhhhhhhccchhhc-cCcccCCCCCCCchHHHHHHHHHHHHhc
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLAT--NDSLASLTVRQSFQKLGLLEAI-GGIQSNNPSIVDLPLIKAFQAVVASLGN 153 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~--~~~~~n~tv~~s~~~lg~~~~~-~g~~~~nP~~~~~t~l~~ld~vV~~a~~ 153 (570)
+.+-++.|+++|||+|=| |+....-. ...|... .+..++ +.+ .| ..+|.+.. .+.|+++|++|.+
T Consensus 152 i~~~LdyLk~LGvtaIwL~Pi~~~~s~~~~~GYd~~----dy~~l~--e~~q~g--~idp~~Gt---~~dfk~Lv~~aH~ 220 (599)
T 3bc9_A 152 LAERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTY----DLWDLG--EFDQKG--TVRTKYGT---KGELENAIDALHN 220 (599)
T ss_dssp HHHHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEE----ETTCSS--CSCBTT--BSSBTTBC---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCChh----hccccc--cccccc--ccCCCCCC---HHHHHHHHHHHHH
Confidence 455678999999999999 44321100 0011100 000000 000 00 24566532 5789999999999
Q ss_pred CCCEEEEe---cCC
Q 008330 154 NNVMVILD---NHI 164 (570)
Q Consensus 154 ~Gl~VILD---~H~ 164 (570)
+||+|||| +|.
T Consensus 221 ~GI~VilD~V~NH~ 234 (599)
T 3bc9_A 221 NDIKVYFDAVLNHR 234 (599)
T ss_dssp TTCEEEEEECCSEE
T ss_pred CCCEEEEEECcCCC
Confidence 99999999 465
|
| >1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A | Back alignment and structure |
|---|
Probab=80.27 E-value=2.3 Score=47.30 Aligned_cols=69 Identities=19% Similarity=0.245 Sum_probs=46.2
Q ss_pred HHHHHHHHHH-cCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 78 MDMLSKRVVD-MGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 78 ~~~~~~~i~~-~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
+.+-++.|++ +|+|+|=| |+.... ....|.. ...+..+|.+-. .+.|+++|++|.++|
T Consensus 193 i~~~LdyLk~~LGvt~I~L~Pi~~~~-~~~GYd~----------------~dy~~id~~~Gt---~~dfk~LV~~~H~~G 252 (637)
T 1ji1_A 193 IDQKLGYIKKTLGANILYLNPIFKAP-TNHKYDT----------------QDYMAVDPAFGD---NSTLQTLINDIHSTA 252 (637)
T ss_dssp HHHTHHHHHTTTCCCEEEESCCEECS-SSSCCSC----------------SEEEEECTTTCC---HHHHHHHHHHHHCSS
T ss_pred HHHhHHHHHhccCCCEEEECCCccCC-CCCCcCc----------------cchhhhccccCC---HHHHHHHHHHHHhCC
Confidence 4455789999 99999999 553211 0111210 112345666643 578999999999999
Q ss_pred --C--EEEEec---CCCC
Q 008330 156 --V--MVILDN---HISK 166 (570)
Q Consensus 156 --l--~VILD~---H~~~ 166 (570)
| +||||+ |...
T Consensus 253 ~~I~~~VIlD~V~NH~~~ 270 (637)
T 1ji1_A 253 NGPKGYLILDGVFNHTGD 270 (637)
T ss_dssp SSSCCEEEEEECCSBCCT
T ss_pred CCccceEEEEECcccCCC
Confidence 9 999994 7643
|
| >1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=80.05 E-value=2.2 Score=48.12 Aligned_cols=71 Identities=14% Similarity=0.091 Sum_probs=47.6
Q ss_pred ChHHHHHHHHHHcCCcEEEe-ccccccc-ccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhc
Q 008330 76 QPMDMLSKRVVDMGFNCVRL-TWPLYLA-TNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGN 153 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRl-Pi~~~~~-~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~ 153 (570)
+.+.+.++.|+++||++|=| |+....- ....|.. ...+..||.+. ..+.|+++|++|.+
T Consensus 17 ~gi~~~LdYLk~LGVtaIwLsPi~~~~~gs~hGYdv----------------~Dy~~Idp~lG---t~edfk~LV~aaH~ 77 (720)
T 1iv8_A 17 GDVIDNLWYFXDLGVSHLYLSPVLMASPGSNHGYDV----------------IDHSRINDELG---GEKEYRRLIETAHT 77 (720)
T ss_dssp HHHHHTHHHHHHHTCCEEEECCCEEECTTCSSCCSE----------------EEEEEECTTTT---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEECCcccCCCCCCCCCCC----------------ccCCCcCccCC---CHHHHHHHHHHHHH
Confidence 34566789999999999998 4432210 0001110 01134577764 36789999999999
Q ss_pred CCCEEEEe---cCCC
Q 008330 154 NNVMVILD---NHIS 165 (570)
Q Consensus 154 ~Gl~VILD---~H~~ 165 (570)
+||+||+| +|..
T Consensus 78 ~GIkVIlDvV~NHta 92 (720)
T 1iv8_A 78 IGLGIIQDIVPNHMA 92 (720)
T ss_dssp TTCEEEEEECCSEEE
T ss_pred CCCEEEEEecccccc
Confidence 99999999 5765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 570 | ||||
| d1ecea_ | 358 | c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellul | 2e-42 | |
| d1bqca_ | 302 | c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca | 3e-21 | |
| d1edga_ | 380 | c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellu | 2e-19 | |
| d1vjza_ | 325 | c.1.8.3 (A:) Endoglucanase homologue TM1752 {Therm | 9e-18 | |
| d1ceoa_ | 340 | c.1.8.3 (A:) Endoglucanase CelC {Clostridium therm | 2e-17 | |
| d1g01a_ | 357 | c.1.8.3 (A:) Alkaline cellulase K catalytic domain | 6e-17 | |
| d7a3ha_ | 300 | c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradh | 1e-16 | |
| d1h1na_ | 305 | c.1.8.3 (A:) Endocellulase EngI {Thermoascus auran | 5e-12 | |
| d1wkya2 | 297 | c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JA | 6e-12 | |
| d1egza_ | 291 | c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysant | 2e-11 | |
| d1qnra_ | 344 | c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [T | 6e-11 | |
| d1tvna1 | 293 | c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalter | 1e-10 | |
| d2pb1a1 | 394 | c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast | 4e-08 | |
| d1uuqa_ | 410 | c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [Ta | 3e-07 | |
| d2c0ha1 | 350 | c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue | 5e-06 | |
| d1h4pa_ | 408 | c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yea | 1e-05 | |
| d1rh9a1 | 370 | c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycoper | 0.001 |
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Length = 358 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Score = 154 bits (388), Expect = 2e-42
Identities = 67/386 (17%), Positives = 124/386 (32%), Gaps = 53/386 (13%)
Query: 38 PLSTNSRWIVDENGHRVKLACVNWVSHLE-PVVAEGLSKQPMDMLSKRVVDMGFNCVRLT 96
T+ R I+D N V++A +NW V GL + + ++ +G+N +RL
Sbjct: 5 YWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLP 64
Query: 97 WPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156
+ + ++ + N + L ++ +VA G +
Sbjct: 65 YSDDILKPGTMPNSI---------------NFYQMNQDLQGLTSLQVMDKIVAYAGQIGL 109
Query: 157 MVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNEL 216
+ILD S + + + WI L +A + G VVG L NE
Sbjct: 110 RIILDR------HRPDCSGQSALWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLHNEP 163
Query: 217 RGPK-----QNVKDWYRYMQLGAEAVHAANPEVLVILSGLNF--------DKDLSFVRNQ 263
P DW + AV + NP +L+ + G+ +L
Sbjct: 164 HDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYWWGGNLQGAGQY 223
Query: 264 AVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEF 323
V L +LV+ AH Y + +P + P+++ EF
Sbjct: 224 PVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGIWNKNWGYLFNQNIAPVWLGEF 283
Query: 324 GADLRGNNVNDNRYLNCF------FGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLF 377
G L+ D +L + W W+ + G+
Sbjct: 284 GTTLQST--TDQTWLKTLVQYLRPTAQYGADSFQWTFWSWNPDS---------GDTGGIL 332
Query: 378 DWNWCDIRNSSFLERISSLQSPFRGP 403
+W + ++ ++ ++S P
Sbjct: 333 KDDWQTV-DTVKDGYLAPIKSSIFDP 357
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Score = 92.2 bits (228), Expect = 3e-21
Identities = 45/327 (13%), Positives = 91/327 (27%), Gaps = 76/327 (23%)
Query: 38 PLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTW 97
L + + + NG + V+ + P + + G N VR+
Sbjct: 3 GLHVKNGRLYEANGQEFIIRGVSHPHNWYPQHTQAF---------ADIKSHGANTVRVVL 53
Query: 98 PLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157
+N V++ N ++
Sbjct: 54 ---------------------------------SNGVRWSKNGPSDVANVISLCKQNRLI 80
Query: 158 VILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217
+L+ H + S + D + ++ ++ G + V +++ NE
Sbjct: 81 CMLEVHDTTGYGEQSGAS----------TLDQAVDYWIELKSVLQGEEDYVLINIGNEPY 130
Query: 218 GPKQ-NVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTG----K 272
G V W + + AA E +++ N+ +D + + +
Sbjct: 131 GNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDPTGN 190
Query: 273 LVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNV 332
VF H YG + + G PL + EFG D N
Sbjct: 191 TVFSIHMYGVYSQASTITSYLEHFV---------------NAGLPLIIGEFGHDHSDGNP 235
Query: 333 NDNRYLNCFFGVAAELDWDWALWTLVG 359
+++ + A L + W+ G
Sbjct: 236 DEDTIMA----EAERLKLGYIGWSWSG 258
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Score = 88.1 bits (217), Expect = 2e-19
Identities = 52/343 (15%), Positives = 89/343 (25%), Gaps = 71/343 (20%)
Query: 83 KRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPL 140
+ GFN VR+ +W + S + +
Sbjct: 68 DAIKQKGFNTVRIPVSWHPH----------------------------VSGSDYKISDVW 99
Query: 141 IKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATI 200
+ Q VV +N + VIL+ H + + +W + +A
Sbjct: 100 MNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYFPSSQYMASSKKYITSVWAQ----IAAR 155
Query: 201 FNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAE------------------AVHAANP 242
F + NE R + W A N
Sbjct: 156 FANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNA 215
Query: 243 EVLVILSGLNFDKD---LSFVRNQAVNLTFTGKLVFEAHWYGFTD--GQAWVDGNPNQVC 297
++ G D + R K++ H Y + G A DG N
Sbjct: 216 SRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWN 275
Query: 298 -------GRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDW 350
V + + +G P+ + E GA + N Y++ + A
Sbjct: 276 INDSKDQSEVTWFMDNIYNKYTSRGIPVIIGECGAVDKNNLKTRVEYMSYYVAQAKARGI 335
Query: 351 DWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLERI 393
LW G E +G FD C + ++ +
Sbjct: 336 LCILWDNNNFS-------GTGELFGFFDRRSCQFKFPEIIDGM 371
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Score = 82.5 bits (202), Expect = 9e-18
Identities = 44/313 (14%), Positives = 94/313 (30%), Gaps = 44/313 (14%)
Query: 83 KRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIK 142
+ FN VR+ L ++ NP I+ +
Sbjct: 27 LWMAQWDFNFVRIPMCHLLWSDR-------------------------GNPFIIREDFFE 61
Query: 143 AFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFN 202
V+ + + + H + + + +I + +A +
Sbjct: 62 KIDRVIFWGEKYGIHICISLHRAPGYSVNKEVEEKTNLWKDETAQEAFIHHWSFIARRYK 121
Query: 203 G-VRNVVGMSLRNELRGP---KQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKD-L 257
G + +L NE P +V+D ++ + +PE L+I+ GL + +
Sbjct: 122 GISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLGYGNIPV 181
Query: 258 SFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRV---------VDNVMRLS 308
+ + + G + F Y + P G +
Sbjct: 182 DDLTIENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTW 241
Query: 309 GFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVI 368
L ++G +F E GA + + ++L + L+ +ALW G + + +
Sbjct: 242 IKLRQKGIEVFCGEMGAYNKTPHDVVLKWLEDLLEIFKTLNIGFALWNFRGPFGILD--- 298
Query: 369 GLNEYYGLFDWNW 381
+E + W
Sbjct: 299 --SERKDVEYEEW 309
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Length = 340 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Score = 81.6 bits (200), Expect = 2e-17
Identities = 40/312 (12%), Positives = 92/312 (29%), Gaps = 70/312 (22%)
Query: 83 KRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIK 142
+ + + GF+ VRL + + +D +N +
Sbjct: 35 ETIAEAGFDHVRLPFDYPIIESD-------------------------DNVGEYKEDGLS 69
Query: 143 AFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFN 202
+ N+ ++LD H PG+ + + F D ++ +A +
Sbjct: 70 YIDRCLEWCKKYNLGLVLDMH-HAPGYRFQDFKTSTLFED-PNQQKRFVDIWRFLAKRYI 127
Query: 203 GVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRN 262
R + L N++ P + W + M +A+ + + + + G N++
Sbjct: 128 NEREHIAFELLNQVVEP--DSTRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDEL--- 182
Query: 263 QAVNLTFTGKLVFEAHWY---GFT-DGQAWVDGNPNQV---------------------- 296
+ + +V+ H+Y FT W +
Sbjct: 183 KNLADIDDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKY 242
Query: 297 ------------CGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGV 344
+ ++ F ++ L+ EFG + + ++ + +
Sbjct: 243 SFMMELNNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGVIAIADLESRIKWHEDYISL 302
Query: 345 AAELDWDWALWT 356
E D A+W
Sbjct: 303 LEEYDIGGAVWN 314
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Score = 80.3 bits (197), Expect = 6e-17
Identities = 43/323 (13%), Positives = 102/323 (31%), Gaps = 44/323 (13%)
Query: 38 PLSTN-SRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLT 96
+ N + E+G V+L ++ E +++ LS D G N +RL
Sbjct: 18 LVELNGQLTLAGEDGTPVQLRGMSTHGL--QWFGEIVNENAFVALSN---DWGSNMIRL- 71
Query: 97 WPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156
+Y+ N + + + +++
Sbjct: 72 -AMYIG----------------------------ENGYATNPEVKDLVYEGIELAFEHDM 102
Query: 157 MVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNV-VGMSLRNE 215
VI+D H+ PG ++ + + D + I+ +
Sbjct: 103 YVIVDWHVHAPGDPRADVYSGAYDFFEEIA-DHYKDHPKNHYIIWELANEPSPNNNGGPG 161
Query: 216 LRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVF 275
L ++ + Y + E + ++ ++ N+ + + ++ +++
Sbjct: 162 LTNDEKGWEAVKEYAEPIVEMLREKGDNMI-LVGNPNWSQRPDLSADNPIDAE---NIMY 217
Query: 276 EAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLR-GNNVND 334
H+Y + G + + NVM + L+ G +F +E+G G+
Sbjct: 218 SVHFYTGSHGASHIGYPEGT-PSSERSNVMANVRYALDNGVAVFATEWGTSQANGDGGPY 276
Query: 335 NRYLNCFFGVAAELDWDWALWTL 357
+ + + + WA W+L
Sbjct: 277 FDEADVWLNFLNKHNISWANWSL 299
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Length = 300 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Score = 78.3 bits (192), Expect = 1e-16
Identities = 55/347 (15%), Positives = 107/347 (30%), Gaps = 80/347 (23%)
Query: 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWP 98
LS ++ +V+E G +V+L ++ + ++ + M L D G N R
Sbjct: 9 LSISNGELVNERGEQVQLKGMSSHGL--QWYGQFVNYESMKWLRD---DWGINVFRA--A 61
Query: 99 LYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158
+Y S+ I D + + + V + + ++ V
Sbjct: 62 MY----------------------------TSSGGYIDDPSVKEKVKEAVEAAIDLDIYV 93
Query: 159 ILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218
I+D HI N + +M+ ++ V + NE G
Sbjct: 94 IIDWHI--LSDNDPNI-----------YKEEAKDFFDEMSELYGD-YPNVIYEIANEPNG 139
Query: 219 PKQNVKDWY-RYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEA 277
+ Y + + +P ++I+ + +D+ + N +++
Sbjct: 140 SDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAAD---NQLADPNVMYAF 196
Query: 278 HWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADL-RGNNVNDNR 336
H+Y T GQ D + L+QG +FVSE+G G+
Sbjct: 197 HFYAGTHGQNLRDQV----------------DYALDQGAAIFVSEWGTSAATGDGGVFLD 240
Query: 337 YLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCD 383
+ E + WA W+L +E
Sbjct: 241 EAQVWIDFMDERNLSWANWSLTHK----------DESSAALMPGANP 277
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Score = 64.8 bits (157), Expect = 5e-12
Identities = 34/278 (12%), Positives = 75/278 (26%), Gaps = 48/278 (17%)
Query: 83 KRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIK 142
++ G N R+ + + +S D +
Sbjct: 38 DTLISKGMNIFRVPFMMERLVPNS-------------------------MTGSPDPNYLA 72
Query: 143 AFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFN 202
A V ++ ++D H + +P + +A+ F
Sbjct: 73 DLIATVNAITQKGAYAVVDPHNYGRYYN-----------SIISSPSDFETFWKTVASQFA 121
Query: 203 GVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAAN-PEVLVILSGLNFDKDLSFVR 261
+V NE Q Q + + +A + + G ++ ++
Sbjct: 122 S-NPLVIFDTDNEYHDMDQT--LVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTWTN 178
Query: 262 NQAVNLTFTG---KLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPL 318
+ T K+++E H Y +DG + G+ + + + +L G
Sbjct: 179 VNDNMKSLTDPSDKIIYEMHQYLDSDGSGTSATCVSSTIGQ--ERITSATQWLRANGKKG 236
Query: 319 FVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWT 356
+ EF G + + A+ W
Sbjct: 237 IIGEFAG---GADNVCETAITGMLDYMAQNTDVWTGAI 271
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Score = 64.2 bits (155), Expect = 6e-12
Identities = 36/324 (11%), Positives = 91/324 (28%), Gaps = 76/324 (23%)
Query: 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWP 98
+ + D NG+ + +N K + + + G N VR+
Sbjct: 3 FYVSGTTLYDANGNPFVMRGINH--------GHAWYKDQATTAIEGIANTGANTVRIVL- 53
Query: 99 LYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158
++ I+ + +++ +NN++
Sbjct: 54 --------------------------------SDGGQWTKDDIQTVRNLISLAEDNNLVA 81
Query: 159 ILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218
+L+ H + + + + +M + G + V +++ NE
Sbjct: 82 VLEVHDATGYDSI-------------ASLNRAVDYWIEMRSALIGKEDTVIINIANEWF- 127
Query: 219 PKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNL---TFTGKLVF 275
+ W + + A +++ + + + + + +F
Sbjct: 128 GSWDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNADPQRNTMF 187
Query: 276 EAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDN 335
H Y + G A +L Q L + EFG +V+++
Sbjct: 188 SIHMYEYAGGNASQVRTNID--------------RVLNQDLALVIGEFGHRHTNGDVDES 233
Query: 336 RYLNCFFGVAAELDWDWALWTLVG 359
++ + + W W+ G
Sbjct: 234 TIMS----YSEQRGVGWLAWSWKG 253
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Score = 62.9 bits (152), Expect = 2e-11
Identities = 53/352 (15%), Positives = 101/352 (28%), Gaps = 81/352 (23%)
Query: 38 PLSTNSRWIVDENGHRVKLACVNWV-SHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLT 96
PLS N I A + S+ + + + L K D + VR
Sbjct: 4 PLSVNGNKIYA-GEKAKSFAGNSLFWSNNGWGGEKFYTADTVASLKK---DWKSSIVRA- 58
Query: 97 WPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156
A+G +S + VV + N++
Sbjct: 59 ---------------------------AMGVQESGGYLQDPAGNKAKVERVVDAAIANDM 91
Query: 157 MVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNEL 216
I+ H N I+ +MA + + V + NE
Sbjct: 92 YAIIGWHSHSAEN----------------NRSEAIRFFQEMARKYGN-KPNVIYEIYNEP 134
Query: 217 RGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFE 276
Y + A+ A +P+ L+I+ ++ +++ +N + +
Sbjct: 135 LQV-SWSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPINAKN---IAYT 190
Query: 277 AHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADL-RGNNVNDN 335
H+Y T G++ + + L G LFV+E+G GN +
Sbjct: 191 LHFYAGTHGESLRN----------------KARQALNNGIALFVTEWGTVNADGNGGVNQ 234
Query: 336 RYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNS 387
+ + + + A W L NE + + ++ S
Sbjct: 235 TETDAWVTFMRDNNISNANWALNDK----------NEGASTYYPDSKNLTES 276
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Score = 61.9 bits (149), Expect = 6e-11
Identities = 43/345 (12%), Positives = 87/345 (25%), Gaps = 42/345 (12%)
Query: 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLAS 109
+G A N + + +D + G VR+ + T S
Sbjct: 15 DGKVGYFAGTNCYWC-----SFLTNHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQ 69
Query: 110 LTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGW 169
+ ++ + N L + ++ ++N G
Sbjct: 70 IWFQKLSATGSTI---------NTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGI 120
Query: 170 CCSNSDGNGFFGDQYFNP---DLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQNVKDW 226
+ G Y N + K + + + + + L NE R +
Sbjct: 121 NAYVNAFGGNATTWYTNTAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVI 180
Query: 227 YRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFT---------GKLVFEA 277
++ ++ V + + LV L T
Sbjct: 181 VQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDGAYPYTYGEGTDFAKNVQIKSLDFGTF 240
Query: 278 HWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRY 337
H Y + G + GN + + L G P E+GA N+ +
Sbjct: 241 HLYPDSWGTNYTWGN---------GWIQTHAAACLAAGKPCVFEEYGAQQNPCT-NEAPW 290
Query: 338 LNCFF---GVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDW 379
G+ ++ W W + + +Y +W
Sbjct: 291 QTTSLTTRGMGGDMFWQWGDT---FANGAQSNSDPYTVWYNSSNW 332
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Score = 60.6 bits (146), Expect = 1e-10
Identities = 37/325 (11%), Positives = 86/325 (26%), Gaps = 69/325 (21%)
Query: 38 PLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAE-GLSKQPMDMLSKRVVDMGFNCVRLT 96
L+ + I+ G A + AE + + + + +R
Sbjct: 4 KLTVSGNQIL-AGGENTSFAGPSLFWSNTGWGAEKFYTAETVAKAKT---EFNATLIRA- 58
Query: 97 WPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156
+ T+ + + + VV + ++
Sbjct: 59 -AIGHGTS------------------------TGGSLNFDWEGNMSRLDTVVNAAIAEDM 93
Query: 157 MVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNEL 216
VI+D H + + + ++ +AT + NV+ + NE
Sbjct: 94 YVIIDFH----------------SHEAHTDQATAVRFFEDVATKYGQYDNVI-YEIYNEP 136
Query: 217 RGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFE 276
D Y + + + A +P+ L+++ + +D+ ++ +
Sbjct: 137 LQISWV-NDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVDVASQNPIDRANIAYTLHF 195
Query: 277 AHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLR-GNNVNDN 335
+ L+ G LF +E+G GN +
Sbjct: 196 YAGTHGQSYRNKAQ-------------------TALDNGIALFATEWGTVNADGNGGVNI 236
Query: 336 RYLNCFFGVAAELDWDWALWTLVGS 360
+ + + A W L
Sbjct: 237 NETDAWMAFFKTNNISHANWALNDK 261
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Score = 53.0 bits (126), Expect = 4e-08
Identities = 39/286 (13%), Positives = 83/286 (29%), Gaps = 47/286 (16%)
Query: 83 KRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPL 140
K++ ++G N VR+ + + Q +
Sbjct: 75 KQISNLGLNFVRIPIGYWAF----------------------------QLLDNDPYVQGQ 106
Query: 141 IKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDG--NGFFGDQYFNPDLWIKGLTKMA 198
++ + + NN+ V +D H + ++ G + + N + + L +
Sbjct: 107 VQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLNTIF 166
Query: 199 TIFNGVRN---VVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDK 255
+ G V+G+ L NE GP N+ ++ G ++ VI+
Sbjct: 167 KKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAFQ-- 224
Query: 256 DLSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQG 315
+ N +V + H Y Q + G ++ + ++
Sbjct: 225 VFGYWNNFLTVAEGQWNVVVDHHHY-----QVFSGGELSRNINDHISVACNWGWDAKKES 279
Query: 316 WPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSY 361
E+ A L D A + + +GS
Sbjct: 280 HWNVAGEWSAAL-----TDCAKWLNGVNRGARYEGAYDNAPYIGSC 320
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Length = 410 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Score = 50.5 bits (119), Expect = 3e-07
Identities = 29/359 (8%), Positives = 81/359 (22%), Gaps = 36/359 (10%)
Query: 50 NGHRVKLACVN-WVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLA 108
G + VN W + E + + + +G N +R + + + A
Sbjct: 14 QGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLR-VLAVSEKSEINSA 72
Query: 109 SLTVRQSFQKLGLLEAIGGI--------QSNNPSIVDLPLIKAFQAVVASLGNNNVMVIL 160
+ + G+ + + ++ + + +
Sbjct: 73 VKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPV 132
Query: 161 DNHISKPGWCCSNSDGNGFFGDQYFNPD-------LWIKGLTKMATIFNGVRNVVGMSLR 213
+ W + F+ + + + + + + ++ L
Sbjct: 133 QDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLA 192
Query: 214 NELRGPKQ-----NVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLT 268
NE R + + ++ A + + LV ++ ++
Sbjct: 193 NEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHA 252
Query: 269 FTGKLVFEAHWYGFTDGQAWVDGNPN---QVCGRVVDNVMRLSGFLLEQGWPLFVSEFGA 325
H + + + + + PL + EFG
Sbjct: 253 TPDIDYLTYHMWIRNWSWFDKTKPAETWPSAWEKAQNYMRAHIDVAKQLNKPLVLEEFGL 312
Query: 326 DLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDI 384
D + + + + + G W W
Sbjct: 313 D--RDMGSYAMDSTTEYRDNYFRGVFELMLASLEQG---------EPSAGYNIWAWNGY 360
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Score = 46.2 bits (108), Expect = 5e-06
Identities = 52/382 (13%), Positives = 96/382 (25%), Gaps = 83/382 (21%)
Query: 50 NGHRVKLACVN--WVSHLEPVVAEGLSKQPMDMLS--KRVVDMGFNCVRLTWPLYLATND 105
NGH + L+ N WV++ SK S + G N VR W +
Sbjct: 12 NGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVR-VWLHIEGEST 70
Query: 106 SLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHIS 165
+ + +D LI +A + + +N+++ +
Sbjct: 71 PEFD-------------------NNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLW-N 110
Query: 166 KPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNE---------- 215
++ NG D L MA + + G + NE
Sbjct: 111 GAVKQSTHYRLNGLMVDTRKLQSYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGES 170
Query: 216 -----------------LRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLS 258
G + ++ R++ A A+ +P +V + N D
Sbjct: 171 SSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPGAMVTVGSWNMKADTD 230
Query: 259 FVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPL 318
+ + + Q N + L P+
Sbjct: 231 AMGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQNHFGNESPFKHSFSNFRL---KKPM 287
Query: 319 FVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFD 378
+ EF F A Y G +
Sbjct: 288 VIGEFNQ-----EHGAGMSSESMFEWAYT-----------------------KGYSGAWT 319
Query: 379 WNWCDIRNSSFLERISSLQSPF 400
W+ D+ ++ L + L+S
Sbjct: 320 WSRTDVSWNNQLRGMQHLKSRT 341
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.6 bits (107), Expect = 1e-05
Identities = 45/289 (15%), Positives = 84/289 (29%), Gaps = 48/289 (16%)
Query: 83 KRVVDMGFNCVRL--TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPL 140
+ GFN VR+ + + +D + S +D
Sbjct: 80 ANIASQGFNLVRIPIGYWAFQILDDD-------------------PYVSGLQESYLD--- 117
Query: 141 IKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNP---DLWIKGLTKM 197
+ NN++ V +D H + G + ++ + I L +
Sbjct: 118 -----QAIGWARNNSLKVWVDLHGA-AGSQNGFDNSGLRDSYKFLEDSNLAVTINVLNYI 171
Query: 198 ATIFNG---VRNVVGMSLRNELRGPKQNVKDWYR-YMQLGAEAVHAANPEVLVILSGLNF 253
++ + V+G+ L NE GP ++ Y+ E + VI+ F
Sbjct: 172 LKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAF 231
Query: 254 DKDLSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLE 313
+ N + + + H Y Q + + + +L
Sbjct: 232 QPYNYWDDFMTENDGYW-GVTIDHHHY-----QVFASDQLERSIDEHIKVACEWGTGVLN 285
Query: 314 QGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWALWTLVGSYY 362
+ + EF A L ++LN G A D W SY
Sbjct: 286 ESHWIVCGEFAAALTDC----IKWLNS-VGFGARYDGSWVNGDQTSSYI 329
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Score = 38.9 bits (89), Expect = 0.001
Identities = 40/371 (10%), Positives = 94/371 (25%), Gaps = 71/371 (19%)
Query: 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLAS 109
NG + + N L + + ++ + ++ N R TW + L
Sbjct: 14 NGKSLYINGFNAY-WLMYIAYDPSTRIKVTNTFQQASKYKMNVAR-TWAFSHGGSRPL-- 69
Query: 110 LTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNH------ 163
+ P + + + + V++ + +I+
Sbjct: 70 --------------------QSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAF 109
Query: 164 --ISKPGWCCSNSDGNGFFGDQYFNPDLWIK------------GLTKMATIFNGVRNVVG 209
+ D +F + T + ++
Sbjct: 110 GGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILS 169
Query: 210 MSLRNELR-GPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRN------ 262
L NE R + K + ++ A + + + L+ + F + N
Sbjct: 170 WELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMRQYNPNSYIF 229
Query: 263 ---QAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLF 319
N G H Y ++ + + + S PL
Sbjct: 230 GTNFISNNQVQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSK---MLKKPLL 286
Query: 320 VSEFGADLRGNNVNDNRYLNCFFGVAAELDWD---------WALWTLVGSYYLREGVIGL 370
++EFG + + N F + + W ++G +G+
Sbjct: 287 IAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLG-----QGMSSF 341
Query: 371 NEYYGLFDWNW 381
++ Y +
Sbjct: 342 DDGYQVVLQES 352
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 570 | |||
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 100.0 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 100.0 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 100.0 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 100.0 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 100.0 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 100.0 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 100.0 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 100.0 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 100.0 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 100.0 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 100.0 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 99.97 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 99.96 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 99.96 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 99.95 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 99.95 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 99.93 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 99.78 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 99.75 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 99.7 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 99.65 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 99.51 | |
| d1yq2a5 | 297 | beta-Galactosidase, domain 3 {Arthrobacter sp. c2- | 99.42 | |
| d1jz8a5 | 292 | beta-Galactosidase, domain 3 {Escherichia coli [Ta | 99.29 | |
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 99.15 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 99.13 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 99.07 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 99.03 | |
| d1ug6a_ | 426 | Beta-glucosidase A {Thermus thermophilus [TaxId: 2 | 99.01 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 98.95 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 98.94 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 98.89 | |
| d2zqna1 | 130 | 29-kDa galactose-binding lectin {Lumbricus terrest | 98.85 | |
| d1e4ia_ | 447 | Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 | 98.84 | |
| d2je8a5 | 348 | Five-domain beta-mannosidase, domain 3 {Bacteroide | 98.77 | |
| d2j78a1 | 443 | Beta-glucosidase A {Thermotoga maritima [TaxId: 23 | 98.75 | |
| d1v02a_ | 484 | Plant beta-glucosidase (myrosinase) {Sorghum bicol | 98.72 | |
| d1vcla2 | 133 | Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar | 98.71 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 98.71 | |
| d1gnxa_ | 464 | Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] | 98.71 | |
| d1ggpb2 | 128 | Plant cytotoxin B-chain (lectin) {Mongolian snake- | 98.7 | |
| d1knma_ | 129 | Xylan binding domain, CBM13 (Endo-1,4-beta-xylanas | 98.7 | |
| d1qoxa_ | 449 | Beta-glucosidase A {Bacillus circulans, subsp. alk | 98.69 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 98.69 | |
| d1pbga_ | 468 | 6-phospho-beta-D-galactosidase, PGAL {Lactococcus | 98.68 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 98.67 | |
| d1uwsa_ | 489 | beta-Glycosidase {Archaeon Sulfolobus solfataricus | 98.64 | |
| d1qvba_ | 481 | beta-Glycosidase {Archaeon Thermosphaera aggregans | 98.6 | |
| d1vcla1 | 150 | Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar | 98.54 | |
| d1vffa1 | 423 | Beta-glucosidase A {Archaeon Pyrococcus horikoshii | 98.53 | |
| d1ta3b_ | 301 | Xylanase A, catalytic core {Emericella nidulans (A | 98.53 | |
| d1xhba1 | 131 | Polypeptide N-acetylgalactosaminyltransferase 1, C | 98.51 | |
| d1dqga_ | 134 | Mannose receptor {Mouse (Mus musculus) [TaxId: 100 | 98.46 | |
| d1ggpb1 | 126 | Plant cytotoxin B-chain (lectin) {Mongolian snake- | 98.43 | |
| d2aaib2 | 127 | Plant cytotoxin B-chain (lectin) {Castor bean (Ric | 98.41 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 98.4 | |
| d1i1wa_ | 303 | Xylanase A, catalytic core {Thermoascus aurantiacu | 98.38 | |
| d1hwmb2 | 131 | Plant cytotoxin B-chain (lectin) {Sambucus ebulus, | 98.36 | |
| d1m2tb2 | 126 | Plant cytotoxin B-chain (lectin) {European mistlet | 98.36 | |
| d1abrb2 | 127 | Plant cytotoxin B-chain (lectin) {Abrus precatoriu | 98.35 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 98.29 | |
| d1hwmb1 | 133 | Plant cytotoxin B-chain (lectin) {Sambucus ebulus, | 98.2 | |
| d1qxma1 | 145 | Hemagglutinin component Ha1 {Clostridium botulinum | 98.14 | |
| d1abrb1 | 140 | Plant cytotoxin B-chain (lectin) {Abrus precatoriu | 98.14 | |
| d1wcga1 | 462 | Thioglucosidase {Cabbage aphid (Brevicoryne brassi | 98.12 | |
| d1cbga_ | 490 | Plant beta-glucosidase (myrosinase) {Creeping whit | 98.07 | |
| d1w32a_ | 346 | Xylanase A, catalytic core {Pseudomonas fluorescen | 97.99 | |
| d2ihoa1 | 154 | Agglutinin MOA, N-terminal domain {Fairy-ring mush | 97.99 | |
| d1e4mm_ | 499 | Plant beta-glucosidase (myrosinase) {White mustard | 97.93 | |
| d2cyga1 | 312 | Plant beta-glucanases {Banana (Musa acuminata), 1, | 97.89 | |
| d1qxma2 | 138 | Hemagglutinin component Ha1 {Clostridium botulinum | 97.87 | |
| d1m2tb1 | 136 | Plant cytotoxin B-chain (lectin) {European mistlet | 97.86 | |
| d1rzob1 | 135 | Plant cytotoxin B-chain (lectin) {Castor bean (Ric | 97.84 | |
| d1aq0a_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 97.77 | |
| d1ghsa_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 97.73 | |
| d2v3ga1 | 273 | Endoglucanase H N-terminal domain {Clostridium the | 97.63 | |
| d1m2tb2 | 126 | Plant cytotoxin B-chain (lectin) {European mistlet | 97.58 | |
| d1ggpb2 | 128 | Plant cytotoxin B-chain (lectin) {Mongolian snake- | 97.58 | |
| d1hwmb2 | 131 | Plant cytotoxin B-chain (lectin) {Sambucus ebulus, | 97.5 | |
| d1qw9a2 | 367 | Alpha-L-arabinofuranosidase, catalytic domain {Bac | 97.47 | |
| d1knma_ | 129 | Xylan binding domain, CBM13 (Endo-1,4-beta-xylanas | 97.47 | |
| d1sr4a_ | 167 | Cytolethal distending toxin subunit A {Haemophilus | 97.46 | |
| d1nofa2 | 277 | Glycosyl hydrolase family 5 xylanase, catalytic do | 97.36 | |
| d1vcla2 | 133 | Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar | 97.34 | |
| d1abrb2 | 127 | Plant cytotoxin B-chain (lectin) {Abrus precatoriu | 97.33 | |
| d2aaib2 | 127 | Plant cytotoxin B-chain (lectin) {Castor bean (Ric | 97.28 | |
| d1ggpb1 | 126 | Plant cytotoxin B-chain (lectin) {Mongolian snake- | 97.18 | |
| d1xhba1 | 131 | Polypeptide N-acetylgalactosaminyltransferase 1, C | 97.12 | |
| d1upsa2 | 131 | GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi | 97.05 | |
| d2zqna1 | 130 | 29-kDa galactose-binding lectin {Lumbricus terrest | 96.9 | |
| d2nt0a2 | 354 | Glucosylceramidase, catalytic domain {Human (Homo | 96.88 | |
| d1dqga_ | 134 | Mannose receptor {Mouse (Mus musculus) [TaxId: 100 | 96.77 | |
| d1vcla1 | 150 | Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar | 96.69 | |
| d1m2tb1 | 136 | Plant cytotoxin B-chain (lectin) {European mistlet | 96.69 | |
| d1rzob1 | 135 | Plant cytotoxin B-chain (lectin) {Castor bean (Ric | 96.68 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 96.62 | |
| d1abrb1 | 140 | Plant cytotoxin B-chain (lectin) {Abrus precatoriu | 96.46 | |
| d1hwmb1 | 133 | Plant cytotoxin B-chain (lectin) {Sambucus ebulus, | 96.34 | |
| d1sr4a_ | 167 | Cytolethal distending toxin subunit A {Haemophilus | 96.31 | |
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 96.28 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 95.42 | |
| d1qxma1 | 145 | Hemagglutinin component Ha1 {Clostridium botulinum | 95.33 | |
| d2bvya2 | 366 | Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708] | 95.31 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 95.21 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 95.09 | |
| d1qxma2 | 138 | Hemagglutinin component Ha1 {Clostridium botulinum | 95.04 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 95.0 | |
| d2ihoa1 | 154 | Agglutinin MOA, N-terminal domain {Fairy-ring mush | 94.89 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 94.78 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 94.74 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 94.43 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 94.42 | |
| d1odza_ | 381 | Mannanase A, ManA {Pseudomonas cellulosa (Cellvibr | 94.39 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 94.24 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 94.17 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 93.68 | |
| d1upsa2 | 131 | GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi | 93.49 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 92.99 | |
| d1m53a2 | 478 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 92.91 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 92.62 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 92.32 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 92.01 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 91.95 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 90.93 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 90.68 | |
| d1bf2a3 | 475 | Isoamylase, central domain {Pseudomonas amyloderam | 90.62 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 90.6 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 90.54 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 90.18 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 89.31 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 89.0 | |
| d2fhfa5 | 563 | Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 | 88.56 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 87.72 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 85.87 | |
| d1g5aa2 | 554 | Amylosucrase {Neisseria polysaccharea [TaxId: 489] | 85.8 | |
| d1iv8a2 | 653 | Maltooligosyl trehalose synthase {Archaeon Sulfolo | 84.43 | |
| d1hcda_ | 118 | Histidine-rich actin-binding protein (hisactophili | 81.61 | |
| d2q02a1 | 271 | Putative cytoplasmic protein STM4435 {Salmonella t | 81.12 | |
| d1r7aa2 | 434 | Sucrose phosphorylase {Bifidobacterium adolescenti | 80.09 | |
| d1dfca1 | 133 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 80.06 |
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Probab=100.00 E-value=4.4e-50 Score=416.56 Aligned_cols=334 Identities=21% Similarity=0.380 Sum_probs=260.4
Q ss_pred CCCCeEecCCeEEcCCCCEEEEEEeeCCCCCC-ccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhh
Q 008330 35 IGLPLSTNSRWIVDENGHRVKLACVNWVSHLE-PVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVR 113 (570)
Q Consensus 35 ~~~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~-~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~ 113 (570)
..++|||+|++|||.+|++|+||||||+|++. ...++|++.++.+++++.||++|||+||||+.++++.+..+..
T Consensus 2 ~~g~l~~~G~~~~d~~G~~~~l~GvN~~g~~~~~~~~~~~~~~~~~~~~~~i~~~G~N~VRlpv~~~~~~~~~~~~---- 77 (358)
T d1ecea_ 2 GGGYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPN---- 77 (358)
T ss_dssp CCSCCEEETTEEECTTSCEECCEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCC----
T ss_pred CCCeEEeeCCEEECCCCCEEEEEEEccCcccccccccccCCccHHHHHHHHHHHcCCCEEEecCcHHHccCCCCCC----
Confidence 45899999999999999999999999999986 4689999999999999999999999999999999887632110
Q ss_pred hhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHH
Q 008330 114 QSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKG 193 (570)
Q Consensus 114 ~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~ 193 (570)
....+..+|.+.+.+++++|+++|++|.++||+||||+|...+.+ .+.+|.+.....+.|+++
T Consensus 78 -----------~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gl~Vildlh~~~~~~------~~~~~~~~~~~~~~~~~~ 140 (358)
T d1ecea_ 78 -----------SINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSG------QSALWYTSSVSEATWISD 140 (358)
T ss_dssp -----------SCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEESBTTB------CCSSSCCSSSCHHHHHHH
T ss_pred -----------CccccccChhhhchhHHHHHHHHHHHHHHCCCceeeecccccccC------CCccccCChHHHHHHHHH
Confidence 122345688888899999999999999999999999999865331 233333334678999999
Q ss_pred HHHHHHHhCCCCcEEEEeccCCCCCCC-----CChhHHHHHHHHHHHHHHhcCCCcEEEEeCCC--------CCCcchhh
Q 008330 194 LTKMATIFNGVRNVVGMSLRNELRGPK-----QNVKDWYRYMQLGAEAVHAANPEVLVILSGLN--------FDKDLSFV 260 (570)
Q Consensus 194 w~~iA~ryk~~p~Vig~dL~NEP~~~~-----~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~--------w~~dl~~~ 260 (570)
|++||+||+++|+|++|||+|||.... .....|++++++++++||+++|+++|+|+|.. |+.++...
T Consensus 141 ~~~ia~~~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~d~~~~v~v~g~~~~~~~~~~~~~~~~~~ 220 (358)
T d1ecea_ 141 LQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYWWGGNLQGA 220 (358)
T ss_dssp HHHHHHHTTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETTEECSTTTBCTTT
T ss_pred HHHHHHhhcCccceEeeeeccccccCCcCCccchhhhHHHHHHHHHHHHHhhCCCcEEEEeccccCccccccccccccch
Confidence 999999999999999999999998753 23567899999999999999999999999865 34455555
Q ss_pred hhcccCcCCCCCEEEEEeecCCCCCC-CCCCCCCcchhhHHHHHHHHHHHHHH-hcCCCeEEeccccCCCCCCcchHHHH
Q 008330 261 RNQAVNLTFTGKLVFEAHWYGFTDGQ-AWVDGNPNQVCGRVVDNVMRLSGFLL-EQGWPLFVSEFGADLRGNNVNDNRYL 338 (570)
Q Consensus 261 ~~~p~~l~~~~nlVys~H~Y~~~~~~-~w~~~~~~~~~~~~~~~~~~~~g~l~-~~g~Pv~iGEFG~~~~~~~~~~~~~~ 338 (570)
...++.++..+++||++|.|+++.+. .+.... ..+..+...+.+.+++.. +.++||+|||||+..... ...+|.
T Consensus 221 ~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Pv~igEfG~~~~~~--~~~~~~ 296 (358)
T d1ecea_ 221 GQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDP--TFPNNMPGIWNKNWGYLFNQNIAPVWLGEFGTTLQST--TDQTWL 296 (358)
T ss_dssp TTSCCCCSSSSCEEEEEECCCTTTCCCGGGSCT--TTTTTHHHHHHHHTHHHHHTTSSCEEEEECCCCCCSH--HHHHHH
T ss_pred hhCCccCCccCceEEEeeecCCCcCCccccccc--hhhhhHHHHHHHHHHHHHHhcCCeEEEecCCCCCCCC--ChHHHH
Confidence 55566556678999999999987652 222111 122334445555555443 378999999999987643 245666
Q ss_pred HHHHHHH------HHCCCceEEeccCceeecccCccCCCceeeeecCCCCCccchhHHHHHHhcccccCCC
Q 008330 339 NCFFGVA------AELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLERISSLQSPFRGP 403 (570)
Q Consensus 339 ~~~~~~~------~~~gigw~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~~~~~~~~~~~~~l~~~~~~p 403 (570)
+++.+++ .+.+++|+||+|+ ++.++++|++.+||.+++.++ ...++.++..+-+|
T Consensus 297 ~~~~~~~~~~~~~~~~~~gw~~W~~k---------~~~~~~~G~~~~dw~~~~~~~-~~~i~~~~~~~~~~ 357 (358)
T d1ecea_ 297 KTLVQYLRPTAQYGADSFQWTFWSWN---------PDSGDTGGILKDDWQTVDTVK-DGYLAPIKSSIFDP 357 (358)
T ss_dssp HHHHHHTCCHHHHTTSSCEEEESCSC---------SCCTTTCCSBCTTSSSBCHHH-HHHHGGGCCCCCCC
T ss_pred HHHHHHHHHHHHhcccCceEEEEcCC---------CCCCCCcceecCCCCCCChhh-hhhccccccccCCC
Confidence 6666654 3678999999998 666889999999999998764 55677777666554
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Probab=100.00 E-value=2.8e-42 Score=351.89 Aligned_cols=266 Identities=19% Similarity=0.215 Sum_probs=203.2
Q ss_pred CCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHH-HcCCcEEEecccccccccCccccchhhhh
Q 008330 37 LPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVV-DMGFNCVRLTWPLYLATNDSLASLTVRQS 115 (570)
Q Consensus 37 ~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~-~~GfN~VRlPi~~~~~~~~~~~n~tv~~s 115 (570)
++|+|+|++|||.+|++|+|||||+.++.. .++. . .+++++.|+ ++|||+||+|+....
T Consensus 7 g~l~v~g~~ivd~nG~~v~lrGvn~~~~~~--~~~~---~-~~~~~~~l~~~~G~N~VR~~~~~~~-------------- 66 (300)
T d7a3ha_ 7 GQLSISNGELVNERGEQVQLKGMSSHGLQW--YGQF---V-NYESMKWLRDDWGINVFRAAMYTSS-------------- 66 (300)
T ss_dssp CSCEEETTEEECTTSCBCCCEEEEESCHHH--HGGG---C-SHHHHHHHHHHTCCCEEEEEEESST--------------
T ss_pred CeEEEeCCEEECCCCCEEEEEEEeCCCccc--cccc---C-CHHHHHHHHHHcCCCEEEEeeEcCc--------------
Confidence 589999999999999999999999987531 0111 1 245566654 799999999985431
Q ss_pred hhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHH
Q 008330 116 FQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLT 195 (570)
Q Consensus 116 ~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~ 195 (570)
+.+ ..++.+++++|++|++|.++|||||||+|...+. + .....+++.++|+
T Consensus 67 -----------~~~-----~~~~~~~~~ld~~v~~a~~~Gl~Vild~h~~~~~------~-------~~~~~~~~~~~w~ 117 (300)
T d7a3ha_ 67 -----------GGY-----IDDPSVKEKVKEAVEAAIDLDIYVIIDWHILSDN------D-------PNIYKEEAKDFFD 117 (300)
T ss_dssp -----------TST-----TTCTTHHHHHHHHHHHHHHHTCEEEEEEECSSSC------S-------TTTTHHHHHHHHH
T ss_pred -----------cCc-----ccCHHHHHHHHHHHHHHHHCCCEEEEeeeecCCC------C-------ChhhHHHHHHHHH
Confidence 111 2245689999999999999999999999975421 1 1134789999999
Q ss_pred HHHHHhCCCCcEEEEeccCCCCCCCC-ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEE
Q 008330 196 KMATIFNGVRNVVGMSLRNELRGPKQ-NVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLV 274 (570)
Q Consensus 196 ~iA~ryk~~p~Vig~dL~NEP~~~~~-~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlV 274 (570)
+||+|||++|.|+ |||+|||+.... ..++|..++++++++||+++|+++|+|++..|..+.......| ..++++|
T Consensus 118 ~ia~ryk~~p~V~-~el~NEP~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~~~~~~~---~~~~niv 193 (300)
T d7a3ha_ 118 EMSELYGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQ---LADPNVM 193 (300)
T ss_dssp HHHHHHTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCHHHHTBHHHHHTSC---CSCTTEE
T ss_pred HHHHHhCCCCcce-eeeecccCCCCCCchhHHHHHHHHHHHHHHhcCCCCceeecCCCcccccchhhcCC---CCCCCEE
Confidence 9999999999986 999999986643 3457999999999999999999999999998887766544433 2357999
Q ss_pred EEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCC-CcchHHHHHHHHHHHHHCCCceE
Q 008330 275 FEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGN-NVNDNRYLNCFFGVAAELDWDWA 353 (570)
Q Consensus 275 ys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~-~~~~~~~~~~~~~~~~~~gigw~ 353 (570)
|++|.|.+... .. +.+...++.+.++||++||||+....+ ...+..+++++++++++++++|+
T Consensus 194 ~~~H~Y~~~~~------------~~----~~~~~~~~~~~~~Pv~~gEfG~~~~~~~~~~~~~~~~~~~~~~~~~~igw~ 257 (300)
T d7a3ha_ 194 YAFHFYAGTHG------------QN----LRDQVDYALDQGAAIFVSEWGTSAATGDGGVFLDEAQVWIDFMDERNLSWA 257 (300)
T ss_dssp EEEEEETTSCC------------HH----HHHHHHHHHHTTCCEEEEEEESSCTTSCSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EEECCccCcCc------------cc----HHHHHHHHHhcCCCEEEeecCCccCCCCCCcCHHHHHHHHHHHHHcCCeEE
Confidence 99999987542 11 222334455689999999999976543 23456889999999999999999
Q ss_pred EeccCceeecccCccCCCceeeeecCCC
Q 008330 354 LWTLVGSYYLREGVIGLNEYYGLFDWNW 381 (570)
Q Consensus 354 ~W~~~G~y~~r~~~~~~~et~Gll~~dw 381 (570)
+|++++ ..++.+++..++
T Consensus 258 ~W~~~~----------~~~~~~~~~~~~ 275 (300)
T d7a3ha_ 258 NWSLTH----------KDESSAALMPGA 275 (300)
T ss_dssp EEEESC----------CSSTTCSBCTTC
T ss_pred EEeCcC----------CCCCcceeecCC
Confidence 999863 245666665433
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Probab=100.00 E-value=1e-41 Score=346.88 Aligned_cols=271 Identities=17% Similarity=0.204 Sum_probs=209.1
Q ss_pred CCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHH-HcCCcEEEecccccccccCccccchhhhh
Q 008330 37 LPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVV-DMGFNCVRLTWPLYLATNDSLASLTVRQS 115 (570)
Q Consensus 37 ~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~-~~GfN~VRlPi~~~~~~~~~~~n~tv~~s 115 (570)
.+|+|+|++|+ .+|++|+|||||++++......+ .-..+++++.|+ ++|+|+||+|++++.+.+
T Consensus 3 ~~l~v~G~~i~-~nG~~v~l~Gvn~~~~~~~~~~~---~~~~~~~~~~l~~~~g~N~VR~~~~~~~~~~----------- 67 (293)
T d1tvna1 3 EKLTVSGNQIL-AGGENTSFAGPSLFWSNTGWGAE---KFYTAETVAKAKTEFNATLIRAAIGHGTSTG----------- 67 (293)
T ss_dssp CCEEEETTEEE-ETTEECCCEEEEECCCCTTSSCG---GGCSHHHHHHHHHHHCCSEEEEEEECCTTST-----------
T ss_pred CeEEEECCEEe-eCCcEEEEEEeecCCcCCCcCCC---cccCHHHHHHHHHhCCCcEEEEecccccccc-----------
Confidence 47999999999 89999999999987765321111 111345566665 689999999998764432
Q ss_pred hhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHH
Q 008330 116 FQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLT 195 (570)
Q Consensus 116 ~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~ 195 (570)
..+...+...++++|++|++|.++|||||||+|...+ ..+.+++.++|+
T Consensus 68 ---------------~~~~~~~~~~l~~ld~~v~~a~~~gi~vild~h~~~~----------------~~~~~~~~~~w~ 116 (293)
T d1tvna1 68 ---------------GSLNFDWEGNMSRLDTVVNAAIAEDMYVIIDFHSHEA----------------HTDQATAVRFFE 116 (293)
T ss_dssp ---------------TSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG----------------GGCHHHHHHHHH
T ss_pred ---------------cccccCcHHHHHHHHHHHHHHHHcCCEEEecCccCCC----------------cccHHHHHHHHH
Confidence 1233345678999999999999999999999997542 134789999999
Q ss_pred HHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEEE
Q 008330 196 KMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVF 275 (570)
Q Consensus 196 ~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlVy 275 (570)
+||+|||++|.|+ |||+|||++.. ....|++++++++++||+++|+++|+|+|..|..+.......|. .++++||
T Consensus 117 ~~a~r~k~~~~V~-~el~NEP~~~~-~~~~~~~~~~~~~~~Ir~~dp~~~I~v~g~~~~~~~~~~~~~~~---~~~~~v~ 191 (293)
T d1tvna1 117 DVATKYGQYDNVI-YEIYNEPLQIS-WVNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVDVASQNPI---DRANIAY 191 (293)
T ss_dssp HHHHHHTTCTTEE-EECCSCCCSCC-TTTTHHHHHHHHHHHHHTTCCSCEEEECCHHHHTCHHHHHHSCC---CSSSEEE
T ss_pred HHHHHhCCCCeEE-EEEecccCCCC-cHHHHHHHHHHHHHHHhhcCCCcEEEEeCCccccccchhhcCCc---cCCCceE
Confidence 9999999999987 99999998764 35679999999999999999999999999988877766555543 2579999
Q ss_pred EEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCC-CcchHHHHHHHHHHHHHCCCceEE
Q 008330 276 EAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGN-NVNDNRYLNCFFGVAAELDWDWAL 354 (570)
Q Consensus 276 s~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~-~~~~~~~~~~~~~~~~~~gigw~~ 354 (570)
++|+|.+...+ .. .+.+..+.+.++||+|||||+.+..+ ...+..+.++++++++++++||++
T Consensus 192 s~H~Y~~~~~~------------~~----~~~~~~~~~~g~Pv~vgEfG~~~~~~~~~~~~~~~~~~~~~~~~~~igw~~ 255 (293)
T d1tvna1 192 TLHFYAGTHGQ------------SY----RNKAQTALDNGIALFATEWGTVNADGNGGVNINETDAWMAFFKTNNISHAN 255 (293)
T ss_dssp EEEEETTTCCH------------HH----HHHHHHHHHTTCCEEEEEEESSCTTSCSCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEeeccccch------------HH----HHHHHHHHhcCCCeEeeccCCcccCCCCCCCHHHHHHHHHHHHHhCCeEEE
Confidence 99999875421 11 22234455689999999999876543 334678899999999999999999
Q ss_pred eccCceeecccCccCCCceeeeecC--CCCCc
Q 008330 355 WTLVGSYYLREGVIGLNEYYGLFDW--NWCDI 384 (570)
Q Consensus 355 W~~~G~y~~r~~~~~~~et~Gll~~--dw~~~ 384 (570)
|+|++ ..++++++.. +|...
T Consensus 256 W~~~d----------~~~~~~~~~~~~~w~~~ 277 (293)
T d1tvna1 256 WALND----------KNEGASLFTPGGSWNSL 277 (293)
T ss_dssp EEESC----------SSSTTCSBCTTCCTTSB
T ss_pred EEeec----------CCCCceEEcCCCCCCCc
Confidence 99962 3466777663 45443
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Probab=100.00 E-value=1.9e-42 Score=361.38 Aligned_cols=270 Identities=14% Similarity=0.177 Sum_probs=200.4
Q ss_pred CCCeEecCCe-EEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHH-cCCcEEEecccccccccCccccchhh
Q 008330 36 GLPLSTNSRW-IVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVD-MGFNCVRLTWPLYLATNDSLASLTVR 113 (570)
Q Consensus 36 ~~~L~t~G~~-IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~-~GfN~VRlPi~~~~~~~~~~~n~tv~ 113 (570)
..+|+|+|++ |||++|++|+||||||+|++- .++.. .++.++.|++ +|||+||||+.++.
T Consensus 16 ~~~l~~~G~~~l~d~~G~~v~lrGv~~~~~~w--~~~~~----~~~~~~~l~~~~G~N~VRlp~~~~~------------ 77 (357)
T d1g01a_ 16 LQLVELNGQLTLAGEDGTPVQLRGMSTHGLQW--FGEIV----NENAFVALSNDWGSNMIRLAMYIGE------------ 77 (357)
T ss_dssp CEEEEETTEEEEECTTSCBCCCEEEEESCHHH--HGGGC----SHHHHHHHHTTSCCSEEEEEEESSS------------
T ss_pred CCeEEEcCeEEEECCCCCEEEEEEEecCcchh--ccccc----CHHHHHHHHHhcCCCEEEEeeeecC------------
Confidence 3568999986 789999999999999987641 11111 2567888875 89999999997531
Q ss_pred hhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHH
Q 008330 114 QSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKG 193 (570)
Q Consensus 114 ~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~ 193 (570)
++...++++++++|++|++|.++|||||||+|...+.+... ...+++.++
T Consensus 78 ------------------~~~~~~~~~~~~ld~~V~~a~~~GiyVIlD~H~~~~~~~~~------------~~~~~~~~~ 127 (357)
T d1g01a_ 78 ------------------NGYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPRA------------DVYSGAYDF 127 (357)
T ss_dssp ------------------SSTTTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCTTS------------GGGTTHHHH
T ss_pred ------------------CCCccCHHHHHHHHHHHHHHHHCCCEEEEeecccCCCCCCh------------hhhhhhHHH
Confidence 11222346799999999999999999999999876543211 113567889
Q ss_pred HHHHHHHhCCCCc--EEEEeccCCCCCCCC----------ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhh
Q 008330 194 LTKMATIFNGVRN--VVGMSLRNELRGPKQ----------NVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVR 261 (570)
Q Consensus 194 w~~iA~ryk~~p~--Vig~dL~NEP~~~~~----------~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~ 261 (570)
|++||+|||++|+ +++|||+|||+.... ....|+.++++++++||+.+++ +|+|.+..|+.+.....
T Consensus 128 W~~iA~ry~~~~~~~~v~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~-~iiv~~~~w~~~~~~~~ 206 (357)
T d1g01a_ 128 FEEIADHYKDHPKNHYIIWELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKGDN-MILVGNPNWSQRPDLSA 206 (357)
T ss_dssp HHHHHHHHTTCTTGGGEEEECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHCCC-CEEECCHHHHTCHHHHH
T ss_pred HHHHHHHHhcCcchHHHHHHHhhccccccCccccccCcchhHHHHHHHHHHHHHHHHhcCCc-eEEEecCCccccchhcc
Confidence 9999999999875 678999999987632 1357899999999999999865 67777778887777666
Q ss_pred hcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCC-CcchHHHHHH
Q 008330 262 NQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGN-NVNDNRYLNC 340 (570)
Q Consensus 262 ~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~-~~~~~~~~~~ 340 (570)
..++. ++|+||++|+|.++.++.+..... .........+.....++.+.++||||||||+....+ ...+..+.++
T Consensus 207 ~~~~~---~~nvvys~H~Y~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~Pv~vgEfG~~~~~~~~~~~~~~~~~ 282 (357)
T d1g01a_ 207 DNPID---AENIMYSVHFYTGSHGASHIGYPE-GTPSSERSNVMANVRYALDNGVAVFATEWGTSQANGDGGPYFDEADV 282 (357)
T ss_dssp HSCCS---SSSEEEEEEEETTTSCCCCCCCCT-TCCGGGCCCHHHHHHHHHHTTCCEEEEEEESSBTTTBSCCCHHHHHH
T ss_pred cccCC---CCCEEEEEEEecCccCCccCCCCc-ccchHHHHHHHHHHHHHHHcCCCEEEEecCCcCCCCCCCcCHHHHHH
Confidence 55543 479999999999877632221111 011122223444556677789999999999987543 2335688899
Q ss_pred HHHHHHHCCCceEEeccC
Q 008330 341 FFGVAAELDWDWALWTLV 358 (570)
Q Consensus 341 ~~~~~~~~gigw~~W~~~ 358 (570)
+++++++++|+|++|+++
T Consensus 283 ~~~~~~~~~isw~~W~~~ 300 (357)
T d1g01a_ 283 WLNFLNKHNISWANWSLT 300 (357)
T ss_dssp HHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHcCCceEEEeCc
Confidence 999999999999999986
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Probab=100.00 E-value=4.8e-41 Score=341.63 Aligned_cols=253 Identities=17% Similarity=0.222 Sum_probs=196.6
Q ss_pred CCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhh
Q 008330 37 LPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSF 116 (570)
Q Consensus 37 ~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~ 116 (570)
.+|||+|++|||.+|++|+|||||+.+. |....++.++.||++|||+||||+.+...
T Consensus 2 ~~l~v~g~~i~d~nG~~~~lrGvn~~~~---------~~~~~~~~~~~i~~~G~N~VRl~~~~~~~-------------- 58 (302)
T d1bqca_ 2 TGLHVKNGRLYEANGQEFIIRGVSHPHN---------WYPQHTQAFADIKSHGANTVRVVLSNGVR-------------- 58 (302)
T ss_dssp CCSEEETTEEECTTSCBCCCEEEEECTT---------TCTTCTTHHHHHHHTTCSEEEEEECCSSS--------------
T ss_pred CcEEEeCCEEECCCCCEEEEEEeecCcc---------cccchHHHHHHHHhcCCCEEEEecccccc--------------
Confidence 4789999999999999999999998543 33334567899999999999999975321
Q ss_pred hhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHH
Q 008330 117 QKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTK 196 (570)
Q Consensus 117 ~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~ 196 (570)
...+.++.++++|++|.++|||||||+|...... ..+....++.+.+.|++
T Consensus 59 -------------------~~~~~~~~~~~~v~~a~~~Gi~vildlh~~~~~~----------~~~~~~~~~~~~~~w~~ 109 (302)
T d1bqca_ 59 -------------------WSKNGPSDVANVISLCKQNRLICMLEVHDTTGYG----------EQSGASTLDQAVDYWIE 109 (302)
T ss_dssp -------------------SCCCCHHHHHHHHHHHHHTTCEEEEEEGGGTTTT----------TSTTCCCHHHHHHHHHH
T ss_pred -------------------cCcchHHHHHHHHHHHHHCCCEEEEEeccccccc----------CCCchHHHHHHHHHHHH
Confidence 1224578899999999999999999999764221 11122458999999999
Q ss_pred HHHHhCCCCcEEEEeccCCCCCCCC-ChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcc----cCcCCCC
Q 008330 197 MATIFNGVRNVVGMSLRNELRGPKQ-NVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQA----VNLTFTG 271 (570)
Q Consensus 197 iA~ryk~~p~Vig~dL~NEP~~~~~-~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p----~~l~~~~ 271 (570)
||+|||++|.|++|||+|||..... +...|..++++++++||+++|+++|+|++..|+.++......+ ...+..+
T Consensus 110 ia~~~~~~p~vv~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~d~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (302)
T d1bqca_ 110 LKSVLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDPTG 189 (302)
T ss_dssp THHHHTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTTTTCTTCHHHHHHHHHHHTCTTC
T ss_pred HHHHhcCCCCEEEEeccccccCCCCcchhhhHHHHHHHHHHHHHcCCCcEEEEcCccccccchhhhccchhccccCCccc
Confidence 9999999999999999999987532 3456889999999999999999999999999987765433222 1123457
Q ss_pred CEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCCc
Q 008330 272 KLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWD 351 (570)
Q Consensus 272 nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gig 351 (570)
++||++|+|.+..+ ...+. +....+.+.++||+|||||+.+.+.. .+.+.+++++++++++
T Consensus 190 ~~vy~~H~Y~~~~~-----------~~~~~----~~~~~~~~~~~Pv~vgEfG~~~~~~~----~~~~~~~~~~~~~~~g 250 (302)
T d1bqca_ 190 NTVFSIHMYGVYSQ-----------ASTIT----SYLEHFVNAGLPLIIGEFGHDHSDGN----PDEDTIMAEAERLKLG 250 (302)
T ss_dssp CEEEEEEESGGGCS-----------HHHHH----HHHHHHHHHTCCEEEEEECCTTSTTC----CCHHHHHHHHHHHTCE
T ss_pred ceEEEeeecCCCCC-----------HHHHH----HHHHHhhhcCCcEEEEecCCcCCCCc----HHHHHHHHHHHHcCCe
Confidence 99999999987543 12222 22233455789999999999876532 4568899999999999
Q ss_pred eEEeccCce
Q 008330 352 WALWTLVGS 360 (570)
Q Consensus 352 w~~W~~~G~ 360 (570)
|++|+|+|.
T Consensus 251 ~~~W~~~~~ 259 (302)
T d1bqca_ 251 YIGWSWSGN 259 (302)
T ss_dssp EEESCSSCC
T ss_pred EEEEEecCC
Confidence 999999853
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Probab=100.00 E-value=4.9e-41 Score=341.67 Aligned_cols=270 Identities=18% Similarity=0.166 Sum_probs=208.7
Q ss_pred CCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHH-HcCCcEEEecccccccccCccccchhhhh
Q 008330 37 LPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVV-DMGFNCVRLTWPLYLATNDSLASLTVRQS 115 (570)
Q Consensus 37 ~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~-~~GfN~VRlPi~~~~~~~~~~~n~tv~~s 115 (570)
-+|+|+|++|++ +|++|.|||+|++.+.... +......+++++.|+ ++|+|+||+|+.++-...
T Consensus 3 ~~l~v~G~~~~~-nG~~v~l~G~n~~~~~~~~---~~~~~~~~~~~~~l~~~~G~N~vR~~~~~~~~~~----------- 67 (291)
T d1egza_ 3 EPLSVNGNKIYA-GEKAKSFAGNSLFWSNNGW---GGEKFYTADTVASLKKDWKSSIVRAAMGVQESGG----------- 67 (291)
T ss_dssp CCEEEETTEEEE-TTEECCCEEEEEEECCTTS---SGGGGCSHHHHHHHHHTTCCCEEEEEEECSSTTS-----------
T ss_pred CcEEEECCEEEE-CCcEEEEEEEecCCcCCCc---CCccccCHHHHHHHHHhcCCCEEEEeccccccCC-----------
Confidence 579999999997 8999999999975432211 111112356777777 689999999997642110
Q ss_pred hhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHH
Q 008330 116 FQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLT 195 (570)
Q Consensus 116 ~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~ 195 (570)
+..+ ....++++|++|++|.++|||||||+|...+. ...+.+.++|+
T Consensus 68 -------------~~~~----~~~~~~~ld~vv~~a~~~Giyvild~h~~~~~----------------~~~~~~~~~w~ 114 (291)
T d1egza_ 68 -------------YLQD----PAGNKAKVERVVDAAIANDMYAIIGWHSHSAE----------------NNRSEAIRFFQ 114 (291)
T ss_dssp -------------TTTC----HHHHHHHHHHHHHHHHHTTCEEEEEEECSCGG----------------GGHHHHHHHHH
T ss_pred -------------cccC----cHHHHHHHHHHHHHHHHCCCeEeeeeccCCCc----------------ccHHHHHHHHH
Confidence 1111 24579999999999999999999999975421 23688999999
Q ss_pred HHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEEE
Q 008330 196 KMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVF 275 (570)
Q Consensus 196 ~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlVy 275 (570)
+||+|||++|.|+ |||+|||++.. ..+.|..++++++++||+++|+++|+|++..|+.+.......++. ++++||
T Consensus 115 ~la~ryk~~p~v~-~el~NEP~~~~-~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~~~~~~~~~~~~~~---~~n~vy 189 (291)
T d1egza_ 115 EMARKYGNKPNVI-YEIYNEPLQVS-WSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPIN---AKNIAY 189 (291)
T ss_dssp HHHHHHTTSTTEE-EECCSCCCSCC-TTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHHTCHHHHHTSCCC---SSSEEE
T ss_pred HHHHHhCCCccee-eeeccCcCCCc-chhhHHHHHHHHHHHHHhcCCCcEEEEecCCcccccchhhhcccC---CCcEEE
Confidence 9999999999985 99999998763 346788999999999999999999999999998887766555532 579999
Q ss_pred EEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC-cchHHHHHHHHHHHHHCCCceEE
Q 008330 276 EAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN-VNDNRYLNCFFGVAAELDWDWAL 354 (570)
Q Consensus 276 s~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~-~~~~~~~~~~~~~~~~~gigw~~ 354 (570)
++|.|.+...+ .. .+......+.++||++||||+....+. ..+..+++.+++++++++|||++
T Consensus 190 s~H~Y~~~~~~------------~~----~~~~~~~~~~~~Pv~vgEfG~~~~~~~~~~~~~~~~~~~~~~~~~~i~w~~ 253 (291)
T d1egza_ 190 TLHFYAGTHGE------------SL----RNKARQALNNGIALFVTEWGTVNADGNGGVNQTETDAWVTFMRDNNISNAN 253 (291)
T ss_dssp EEEEETTTCCH------------HH----HHHHHHHHHTTCCEEEEEEESSCTTSCSCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred EecccCCCCch------------hH----HHHHHHHHHcCCCeEecccCCcccCCCCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 99999976531 11 112233455889999999998765443 34678899999999999999999
Q ss_pred eccCceeecccCccCCCceeeeecCCCCCcc
Q 008330 355 WTLVGSYYLREGVIGLNEYYGLFDWNWCDIR 385 (570)
Q Consensus 355 W~~~G~y~~r~~~~~~~et~Gll~~dw~~~~ 385 (570)
|+|+ +.+|++|++..||.++.
T Consensus 254 W~~~----------~~~~~~~~~~~~~~~~t 274 (291)
T d1egza_ 254 WALN----------DKNEGASTYYPDSKNLT 274 (291)
T ss_dssp EEEC----------CSSSTTCSBCTTSCCBC
T ss_pred Eeee----------CCCCCeeeecCCCCCcC
Confidence 9995 34778899998888765
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Probab=100.00 E-value=4.6e-41 Score=340.69 Aligned_cols=249 Identities=15% Similarity=0.203 Sum_probs=196.3
Q ss_pred CeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhh
Q 008330 38 PLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQ 117 (570)
Q Consensus 38 ~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~ 117 (570)
-|+|+|++|||++|++|+|||||+. +++..+..+++++.||++|+|+||||+.+...
T Consensus 2 ~l~v~G~~ivd~nG~~~~l~Gvn~~--------~~~~~~~~~~d~~~~~~~G~N~VRl~~~~~~~--------------- 58 (297)
T d1wkya2 2 GFYVSGTTLYDANGNPFVMRGINHG--------HAWYKDQATTAIEGIANTGANTVRIVLSDGGQ--------------- 58 (297)
T ss_dssp CCEEETTEEECTTSCBCCCEEEEEC--------GGGCGGGHHHHHHHHHTTTCSEEEEEECCSSS---------------
T ss_pred ceEEECCEEECCCCCEEEEEEeccC--------cccCchHHHHHHHHHHHCCCcEEEEeccCCCc---------------
Confidence 3799999999999999999999973 23344568899999999999999999965211
Q ss_pred hccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHH
Q 008330 118 KLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKM 197 (570)
Q Consensus 118 ~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~i 197 (570)
...+.+++||++|++|.++|||||||+|...... .....+.+.++|+++
T Consensus 59 ------------------~~~~~~~~ld~~v~~a~~~Gi~vildlh~~~~~~-------------~~~~~~~~~~~w~~~ 107 (297)
T d1wkya2 59 ------------------WTKDDIQTVRNLISLAEDNNLVAVLEVHDATGYD-------------SIASLNRAVDYWIEM 107 (297)
T ss_dssp ------------------SCCCCHHHHHHHHHHHHHTTCEEEEEECTTTTCC-------------CHHHHHHHHHHHHHT
T ss_pred ------------------cCccHHHHHHHHHHHHHHCCCceEeecccccccc-------------ccccHHHHHHHHHHH
Confidence 1234689999999999999999999999764321 113467889999999
Q ss_pred HHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcc---cCcCCCCCEE
Q 008330 198 ATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQA---VNLTFTGKLV 274 (570)
Q Consensus 198 A~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p---~~l~~~~nlV 274 (570)
|+||+++|+|++|||+|||+... ....|..++++++++||+++|+++|+|++..|+++...+.... ......+++|
T Consensus 108 a~~~~~~p~v~~~~l~NEp~~~~-~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 186 (297)
T d1wkya2 108 RSALIGKEDTVIINIANEWFGSW-DGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNADPQRNTM 186 (297)
T ss_dssp GGGTTTCTTTEEEECCTTCCCSS-CHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTBTHHHHHHHHHHHHTCTTCCEE
T ss_pred HHHhcCCCCEEEEeccccccccc-hhhhhhhhhhhhHHHHHhcCCCceEEEecCCcccccchhhhccccccCCCccccee
Confidence 99999999999999999998754 4678999999999999999999999999999988765433321 1123457999
Q ss_pred EEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCCceEE
Q 008330 275 FEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWAL 354 (570)
Q Consensus 275 ys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gigw~~ 354 (570)
|++|.|.+... ....+ ......+.+.++||+|||||+...+++. +.++++++++++++||++
T Consensus 187 y~~H~Y~~~~~----------~~~~~----~~~~~~~~~~g~Pv~vgEfG~~~~~~~~----~~~~~~~~~~~~~~gw~~ 248 (297)
T d1wkya2 187 FSIHMYEYAGG----------NASQV----RTNIDRVLNQDLALVIGEFGHRHTNGDV----DESTIMSYSEQRGVGWLA 248 (297)
T ss_dssp EEEEESTTTSS----------SHHHH----HHHHHHHHTTTCCEEEEEECSEETTEEC----CHHHHHHHHHHTTCEEEE
T ss_pred EeeccccCCCC----------ChhhH----HHHHHHHhhcCCCEEEEeecccCCCCcH----HHHHHHHHHHHcCCeEEE
Confidence 99999986542 11122 2223344568999999999998765332 246788999999999999
Q ss_pred eccCc
Q 008330 355 WTLVG 359 (570)
Q Consensus 355 W~~~G 359 (570)
|+|++
T Consensus 249 W~~~~ 253 (297)
T d1wkya2 249 WSWKG 253 (297)
T ss_dssp SCSSC
T ss_pred EEEEC
Confidence 99974
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Probab=100.00 E-value=4.1e-41 Score=349.18 Aligned_cols=288 Identities=14% Similarity=0.206 Sum_probs=207.6
Q ss_pred EEEEeeCCCCCCcc---ccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccC
Q 008330 55 KLACVNWVSHLEPV---VAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSN 131 (570)
Q Consensus 55 ~L~GVNw~g~~~~~---v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~ 131 (570)
..||||..|+.+.. ..+.....-.+++++.|+++|||+||||++++.+.++ .
T Consensus 4 ~~rGvNlg~w~~~~~~~~~~h~~~~~te~d~~~i~~~G~n~vRlpi~~~~~~~~-------------------------~ 58 (340)
T d1ceoa_ 4 FKAGINLGGWISQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESD-------------------------D 58 (340)
T ss_dssp CSEEEECTTSBSSCSSCCHHHHHHHSCHHHHHHHHHHTCCEEEEEEEGGGTBCS-------------------------S
T ss_pred ccceeeechhhhcccccchhhhcccccHHHHHHHHHcCCCEEEeecCHHHhccC-------------------------C
Confidence 46999976654321 1111000113788999999999999999999876542 1
Q ss_pred CCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEe
Q 008330 132 NPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMS 211 (570)
Q Consensus 132 nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~d 211 (570)
+|...+...+++||++|++|.++||+||||+|..+ +|.........+|.+. ...++++++|++||+|||++|+|++||
T Consensus 59 ~~~~~~~~~~~~ld~~v~~a~~~gi~vild~H~~p-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~la~ry~~~p~v~~~e 136 (340)
T d1ceoa_ 59 NVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHHAP-GYRFQDFKTSTLFEDP-NQQKRFVDIWRFLAKRYINEREHIAFE 136 (340)
T ss_dssp STTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEECC-C--------CCTTTCH-HHHHHHHHHHHHHHHHTTTCCSSEEEE
T ss_pred CCCccCHHHHHHHHHHHHHHHHcCCEEEEEecCCC-cccccccccccccccH-HHHHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 23334567899999999999999999999999875 3333222333555554 236789999999999999999999999
Q ss_pred ccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEEEEEeecCCCCC--C--C
Q 008330 212 LRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAHWYGFTDG--Q--A 287 (570)
Q Consensus 212 L~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlVys~H~Y~~~~~--~--~ 287 (570)
|+|||..+ +.++|.+++++++++||++||+++|+|+|..|+.......-.+ ..++|+||++|.|.|..+ | .
T Consensus 137 l~NEP~~~--~~~~~~~~~~~~~~aIR~~dp~~~I~v~g~~~~~~~~~~~~~~---~~d~nv~~~~H~Y~p~~fth~~~~ 211 (340)
T d1ceoa_ 137 LLNQVVEP--DSTRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDELKNLAD---IDDDYIVYNFHFYNPFFFTHQKAH 211 (340)
T ss_dssp CCSCCCCS--SSHHHHHHHHHHHHHHHHHCSSCCEEEECHHHHCGGGGGGSCC---CCCSSEEEEEEECCSHHHHTTTCT
T ss_pred eeeecCCC--CHHHHHHHHHHHHHHHHhcCCCcEEEeCCCCcCCchhhhcCCC---CCCCCEEEEEeccCcccccccccc
Confidence 99999876 5688999999999999999999999999988865433222111 236899999999986532 1 2
Q ss_pred CCCC-------------C---------------------CcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcc
Q 008330 288 WVDG-------------N---------------------PNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVN 333 (570)
Q Consensus 288 w~~~-------------~---------------------~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~ 333 (570)
|... . .....+.+...+.....+..+.++||+|||||+....+.+.
T Consensus 212 w~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Pv~igEFG~~~~~~~~~ 291 (340)
T d1ceoa_ 212 WSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMELNNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGVIAIADLES 291 (340)
T ss_dssp TCHHHHHHCCCCCSSEECCSHHHHHHHCGGGGGGGGGTTCEESHHHHHHHHHHHHHHHHHHCCEEEEEEECCCTTSCHHH
T ss_pred ccccccccccccCCCccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcCCCEEEEccCCcCCCCHHH
Confidence 2110 0 00011233444444445556689999999999987665555
Q ss_pred hHHHHHHHHHHHHHCCCceEEeccCceeecccCccCCCceeeeecCCCCCccc
Q 008330 334 DNRYLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRN 386 (570)
Q Consensus 334 ~~~~~~~~~~~~~~~gigw~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~~~~ 386 (570)
+.+|++++++++++++|+|++|+|+| ..||+++.+..++..
T Consensus 292 ~~~~~~~~~~~~~~~~igw~~W~~~~------------~~fg~~~~~~~~~~~ 332 (340)
T d1ceoa_ 292 RIKWHEDYISLLEEYDIGGAVWNYKK------------MDFEIYNEDRKPVSQ 332 (340)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCSBS------------TTCCSBCTTSCBSCH
T ss_pred HHHHHHHHHHHHHHcCCcEEEeCCCC------------CCcceeeCCCCCccH
Confidence 67999999999999999999999863 358999988766654
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Probab=100.00 E-value=1.9e-39 Score=332.53 Aligned_cols=262 Identities=13% Similarity=0.132 Sum_probs=196.6
Q ss_pred CEEEEEEeeCCCCCCc-cccCCCCCC----hHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhcc
Q 008330 52 HRVKLACVNWVSHLEP-VVAEGLSKQ----PMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIG 126 (570)
Q Consensus 52 ~~v~L~GVNw~g~~~~-~v~~Gl~~~----~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~ 126 (570)
+.|+|+||||+|.+.. ....|++.. +.+++++.|+++|||+||||++++.+.+..
T Consensus 2 ~~~~~~Gvn~~G~e~~~~~~~g~~~~~~~~~t~~di~~l~~~G~N~VRlPv~~~~~~~~~-------------------- 61 (305)
T d1h1na_ 2 KVFQWFGSNESGAEFGSQNLPGVEGKDYIWPDPNTIDTLISKGMNIFRVPFMMERLVPNS-------------------- 61 (305)
T ss_dssp CSSSEEEEEECCTTCSTTSSSCCBTTTBCCCCHHHHHHHHHTTCCEEEEEECHHHHSCSS--------------------
T ss_pred CceeEEEEEccccccCCCCCCCccCCCcccCCHHHHHHHHHCCCCEEEeeeeHHHhccCC--------------------
Confidence 5688999999999853 344555543 358889999999999999999998776421
Q ss_pred CcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCc
Q 008330 127 GIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRN 206 (570)
Q Consensus 127 g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~ 206 (570)
.+...+.+++++++++|++|.++||+||||+|+... + +.+...+.+++.++|++||++|++++.
T Consensus 62 -----~~~~~~~~~~~~l~~~v~~a~~~gl~vIlD~H~~~~-~----------~~~~~~~~~~~~~~W~~ia~~~~~~~~ 125 (305)
T d1h1na_ 62 -----MTGSPDPNYLADLIATVNAITQKGAYAVVDPHNYGR-Y----------YNSIISSPSDFETFWKTVASQFASNPL 125 (305)
T ss_dssp -----TTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTE-E----------TTEECCCHHHHHHHHHHHHHTSTTCTT
T ss_pred -----CCCccCHHHHHHHHHHHHHHHhcCCeEEEecccCCc-c----------cccccccHHHHHHHHHHHHHHhCCCCe
Confidence 112245689999999999999999999999998531 1 122234678999999999999999998
Q ss_pred EEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcC-CCcEEEEeCCCCCCcchhhhhcc-cC-c-CCCCCEEEEEeecCC
Q 008330 207 VVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAAN-PEVLVILSGLNFDKDLSFVRNQA-VN-L-TFTGKLVFEAHWYGF 282 (570)
Q Consensus 207 Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~d-p~~lIiVeG~~w~~dl~~~~~~p-~~-l-~~~~nlVys~H~Y~~ 282 (570)
| +|||+|||++. ..++|.+++++++++||+++ |+++|+|++..|+.+.......+ .. + +..+|+||++|.|.+
T Consensus 126 v-~~el~NEP~~~--~~~~w~~~~~~~~~~IR~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~H~Y~~ 202 (305)
T d1h1na_ 126 V-IFDTDNEYHDM--DQTLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTWTNVNDNMKSLTDPSDKIIYEMHQYLD 202 (305)
T ss_dssp E-EEECCSCCCSS--CHHHHHHHHHHHHHHHHHTTCCSSCEEEECTGGGBSTTHHHHSGGGGGCCCTTCCEEEEEEEECS
T ss_pred e-EEEeccCCCCc--cHHHHHHHHHHHHHHHHhcCCCCCEEEECCCcccccccccccCcccccCCCCCCCEEEEEEeCCC
Confidence 7 59999999865 67899999999999999998 58899999998877654433221 11 1 235799999999988
Q ss_pred CCCC-CCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCC---CceEEeccC
Q 008330 283 TDGQ-AWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELD---WDWALWTLV 358 (570)
Q Consensus 283 ~~~~-~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~g---igw~~W~~~ 358 (570)
..+. ....... .......+.....++.++|+|++|||||+... ..+..|++.+++++++++ ++|+||+.+
T Consensus 203 ~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~g~p~~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~~gw~~W~~g 276 (305)
T d1h1na_ 203 SDGSGTSATCVS---STIGQERITSATQWLRANGKKGIIGEFAGGAD---NVCETAITGMLDYMAQNTDVWTGAIWWAAG 276 (305)
T ss_dssp TTSSSCCSCCSC---TTHHHHHHHHHHHHHHHTTCCEEEEEEECCSS---HHHHHHHHHHHHHHHTCTTTEEEEEEEEEC
T ss_pred CCCCCccccccc---cchHHHHHHHHHHHHHHcCCcEEEEcCCCCCC---CcHHHHHHHHHHHHHHcCCcceEEEEecCC
Confidence 7652 1111101 11223344444456667999999999998753 235789999999999998 677788764
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Probab=100.00 E-value=4e-38 Score=331.68 Aligned_cols=299 Identities=15% Similarity=0.106 Sum_probs=213.3
Q ss_pred EeeCCCCCCcc---------ccCCCCCCh--HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhcc
Q 008330 58 CVNWVSHLEPV---------VAEGLSKQP--MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIG 126 (570)
Q Consensus 58 GVNw~g~~~~~---------v~~Gl~~~~--~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~ 126 (570)
|+|....++.+ --|+.|.+| .+++++.||++|||+||||++|..+.++
T Consensus 32 g~nlgn~lda~~~~~~~~~~~~e~~Wgnp~~t~~~i~~ik~~Gfn~vRiPv~w~~~~~~--------------------- 90 (380)
T d1edga_ 32 GWNLGNTFDAFNGTNITNELDYETSWSGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSG--------------------- 90 (380)
T ss_dssp EEECTTSTTCCCCSSCCSGGGHHHHTTCSCCCHHHHHHHHHHTCCEEEECCCCGGGEET---------------------
T ss_pred ccccCcCcccCCCccccCCCCCCCccCCccccHHHHHHHHHcCCCEEEEcccHHHhcCC---------------------
Confidence 88876554431 124556655 5899999999999999999998754321
Q ss_pred CcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCc
Q 008330 127 GIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRN 206 (570)
Q Consensus 127 g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~ 206 (570)
.|...+.++|+++++||++|.++|||||||+|+..+.+.... . ..+... ...+.|.++|++||+|||+++.
T Consensus 91 -----~~~~i~~~~l~~v~~vV~~a~~~Gl~VIldlHh~~~~~~~~~--~-~~~~~~-~~~~~~~~~W~qiA~~fkd~~~ 161 (380)
T d1edga_ 91 -----SDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYF--P-SSQYMA-SSKKYITSVWAQIAARFANYDE 161 (380)
T ss_dssp -----TTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSBC--S-SGGGHH-HHHHHHHHHHHHHHHHTTTCCT
T ss_pred -----CCCccCHHHHHHHHHHHHHHHHcCCEEEEecccCCCCCcccC--C-cccCcH-HHHHHHHHHHHHHHHhhcCCCc
Confidence 123346689999999999999999999999999764332111 1 111111 2367889999999999999999
Q ss_pred EEEEeccCCCCCCCC---------------ChhHHHHHHHHHHHHHHhc---CCCcEEEEeCCCCCCcchhhhh--cccC
Q 008330 207 VVGMSLRNELRGPKQ---------------NVKDWYRYMQLGAEAVHAA---NPEVLVILSGLNFDKDLSFVRN--QAVN 266 (570)
Q Consensus 207 Vig~dL~NEP~~~~~---------------~~~~W~~~~~~~~~aIr~~---dp~~lIiVeG~~w~~dl~~~~~--~p~~ 266 (570)
+++|||+|||+.... ....+.++.+.++++||++ +|+++|+|+|..++.+...... .|..
T Consensus 162 ~l~fel~NEP~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~IR~~~~~n~~r~i~v~g~~~~~~~~~~~~~~~p~d 241 (380)
T d1edga_ 162 HLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNASRYLMCPGYVASPDGATNDYFRMPND 241 (380)
T ss_dssp TEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTCGGGGTSCEEEECGGGCHHHHHSTTCCCCCC
T ss_pred eEEEeecccccccCCccccccccccccHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCccCCccccchhhccccc
Confidence 999999999986531 1134567888899999997 5778999999887654332211 1222
Q ss_pred c-CCCCCEEEEEeecCCCCC--C---CCCCCC----CcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHH
Q 008330 267 L-TFTGKLVFEAHWYGFTDG--Q---AWVDGN----PNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNR 336 (570)
Q Consensus 267 l-~~~~nlVys~H~Y~~~~~--~---~w~~~~----~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~ 336 (570)
. ..++++||++|+|.|+.| + .+.... .......+...++....++.++|+||+|||||+........+.+
T Consensus 242 ~~~~~~~li~s~H~Y~p~~f~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~giPviiGEfG~~~~~~~~~r~~ 321 (380)
T d1edga_ 242 ISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNINDSKDQSEVTWFMDNIYNKYTSRGIPVIIGECGAVDKNNLKTRVE 321 (380)
T ss_dssp CTTCCSCEEEEEECCCSHHHHTSCGGGTCCCCCCTTCHHHHHHHHHHHHHHHHHTGGGTCCEEEEEECCCCSSCHHHHHH
T ss_pred ccCCCCCEEEEEeecCccccccccCCcCCCCccccCccccHHHHHHHHHHHHHHHHhcCceEEEecccCcCCCChHHHHH
Confidence 1 235799999999997654 1 111110 11122345555555556667799999999999987665555678
Q ss_pred HHHHHHHHHHHCCCceEEeccCceeecccCccCCCceeeeecCCCCCccchhHHHHH
Q 008330 337 YLNCFFGVAAELDWDWALWTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLERI 393 (570)
Q Consensus 337 ~~~~~~~~~~~~gigw~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~~~~~~~~~~~ 393 (570)
|++++++.++++|++|+||... .+ .+.++.||++++...+++.|+.++.|
T Consensus 322 ~~~~~~~~a~~~gi~~~~Wdn~-~~------~~~~~~fg~~dr~~~~w~~p~~~~~~ 371 (380)
T d1edga_ 322 YMSYYVAQAKARGILCILWDNN-NF------SGTGELFGFFDRRSCQFKFPEIIDGM 371 (380)
T ss_dssp HHHHHHHHHHHTTCEEEECCCC-CC------SSSSCCCCCEETTTTEESSHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEECCC-CC------CCCccCcceeeCCCCccCCHHHHHHH
Confidence 9999999999999999999854 21 35578899999988889888776544
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.5e-36 Score=308.67 Aligned_cols=269 Identities=17% Similarity=0.221 Sum_probs=194.0
Q ss_pred EEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCC
Q 008330 56 LACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSI 135 (570)
Q Consensus 56 L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~ 135 (570)
.||+|..++.+ ......-.+++++.|+++|||+||||+.+++++++ .+|..
T Consensus 4 ~~G~n~~~~~~----~~~~~~~~e~d~~~l~~~G~n~vRlpv~~~~~~~~-------------------------~~~~~ 54 (325)
T d1vjza_ 4 WRGFNLLEAFS----IKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDR-------------------------GNPFI 54 (325)
T ss_dssp CEEEECCTTSS----TTCCCCCCHHHHHHHHHTTCCEEEEEEEGGGTSCS-------------------------SCTTC
T ss_pred ccceehhhhhh----hcccCCCCHHHHHHHHHcCCCEEEecccHHHccCC-------------------------CCCCc
Confidence 58999765532 22333446899999999999999999999887652 24555
Q ss_pred CCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCC-CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCc-EEEEecc
Q 008330 136 VDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNS-DGNGFFGDQYFNPDLWIKGLTKMATIFNGVRN-VVGMSLR 213 (570)
Q Consensus 136 ~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~-dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~-Vig~dL~ 213 (570)
.+.++|++|+++|++|.++||+||||+|..++.+.+... ....+|.+. ..+++++.+|++||++|+++++ |++|||+
T Consensus 55 ~~~~~l~~ld~~v~~~~~~gi~vildlH~~pg~~~~~~~~~~~~~~~~~-~~~~~~~~~w~~~a~~~~~~~~~i~~~el~ 133 (325)
T d1vjza_ 55 IREDFFEKIDRVIFWGEKYGIHICISLHRAPGYSVNKEVEEKTNLWKDE-TAQEAFIHHWSFIARRYKGISSTHLSFNLI 133 (325)
T ss_dssp CCGGGHHHHHHHHHHHHHHTCEEEEEEEEETTEESCTTSCCSSCTTTCH-HHHHHHHHHHHHHHHHHTTSCTTTEEEECS
T ss_pred cCHHHHHHHHHHHHHHHHcCCcEEEeeccccccccCcccccccccccch-hhHHHHHHHHHHHHHHhcccceeEEeeecc
Confidence 677899999999999999999999999988654322211 112333333 2367889999999999998755 7899999
Q ss_pred CCCCCCC---CChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEEEEEeecCCCCC----C
Q 008330 214 NELRGPK---QNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAHWYGFTDG----Q 286 (570)
Q Consensus 214 NEP~~~~---~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlVys~H~Y~~~~~----~ 286 (570)
|||+... ...++|.+++++++++||+++|+++|+|+|.+|++... .....++++|++|.|.+..+ .
T Consensus 134 NEP~~~~~~~~~~~~~~~~~~~~~~~ir~~~p~~~v~v~g~~~~~~~~-------~~~~~~~~~~~~~~y~~~~~~~~~~ 206 (325)
T d1vjza_ 134 NEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLGYGNIPV-------DDLTIENTVQSCRGYIPFSVTHYKA 206 (325)
T ss_dssp SCCCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCEEEECHHHHTBCC-------TTCCCSSEEEEEEECCSHHHHSTTC
T ss_pred ccCCCCccccchhhhhhhHHHHHHHHHhccCCCcEEEecCCccccccC-------Ccccccceeeeeccccccccccccc
Confidence 9998652 35678999999999999999999999999987754321 11235799999999975432 1
Q ss_pred CCCCCC----C-------cchhhHHHHHHHHHHHH--HHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCCceE
Q 008330 287 AWVDGN----P-------NQVCGRVVDNVMRLSGF--LLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDWDWA 353 (570)
Q Consensus 287 ~w~~~~----~-------~~~~~~~~~~~~~~~g~--l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gigw~ 353 (570)
.|.... . ...+......+.....+ ..+.++||+|||||+....+.....+|+++++++++++++||+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Pv~~gEfG~~~~~~~~~~~~~~~~~l~~~~~~g~g~~ 286 (325)
T d1vjza_ 207 EWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIKLRQKGIEVFCGEMGAYNKTPHDVVLKWLEDLLEIFKTLNIGFA 286 (325)
T ss_dssp TTTTCTTCCCCCSSSEEETTEEECHHHHHHHHHHHHGGGGGTCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred ccccccccccCCCCccccccccccHHHHHHHHHHHHHHHhcCCCEEEeeccCcCCCCcHHHHHHHHHHHHHHHHcCCeEE
Confidence 221110 0 00111122222221222 2347999999999987665555567899999999999999999
Q ss_pred EeccCcee
Q 008330 354 LWTLVGSY 361 (570)
Q Consensus 354 ~W~~~G~y 361 (570)
+|+|+|.|
T Consensus 287 ~W~~~~~~ 294 (325)
T d1vjza_ 287 LWNFRGPF 294 (325)
T ss_dssp ESCSBSTT
T ss_pred EEcCCCCc
Confidence 99998643
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Probab=99.97 E-value=1.3e-30 Score=275.46 Aligned_cols=177 Identities=18% Similarity=0.166 Sum_probs=132.0
Q ss_pred HHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEE
Q 008330 79 DMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~V 158 (570)
+++++.|+++|||+||||+.++.+... ...| .....+++||++|++|.++||+|
T Consensus 71 ~~D~~~i~~~G~N~VRiPv~~~~~~~~------------------------~~~~--~~~~~~~~ld~~i~~a~~~gl~V 124 (394)
T d2pb1a1 71 EQDFKQISNLGLNFVRIPIGYWAFQLL------------------------DNDP--YVQGQVQYLEKALGWARKNNIRV 124 (394)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGTCCC------------------------TTCC--CCCCHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHCCCCEEEEEecHHHhcCC------------------------CCCc--cchhHHHHHHHHHHHHHHCCcEE
Confidence 567999999999999999999876541 0111 22357899999999999999999
Q ss_pred EEecCCCCCCcccc---CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC---cEEEEeccCCCCCCCCChhHHHHHHHH
Q 008330 159 ILDNHISKPGWCCS---NSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVR---NVVGMSLRNELRGPKQNVKDWYRYMQL 232 (570)
Q Consensus 159 ILD~H~~~~~w~~~---~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p---~Vig~dL~NEP~~~~~~~~~W~~~~~~ 232 (570)
|||+|..++..... ...+..+|.+. ...+.++++|++||+||++++ .|+||||+|||.........|.+++++
T Consensus 125 ilDlH~~pg~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~ia~~~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~~ 203 (394)
T d2pb1a1 125 WIDLHGAPGSQNGFDNSGLRDSYNFQNG-DNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLD 203 (394)
T ss_dssp EEEEEECTTCSSCCGGGSSTTCCCTTST-THHHHHHHHHHHHHHHHSSGGGTTTEEEEESCSCCCGGGSCHHHHHHHHHH
T ss_pred EEEeeccCCcccCcCCcCccCccccccH-HHHHHHHHHHHHHHHHHccCCCCCceEEEeecccCCcccccHHHHHHHHHH
Confidence 99999986532211 11222344433 357889999999999999876 699999999998765567789999999
Q ss_pred HHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEEEEEeecCCCC
Q 008330 233 GAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAHWYGFTD 284 (570)
Q Consensus 233 ~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlVys~H~Y~~~~ 284 (570)
++++||+++|+++|+|++..++.... ....+.. ...+++||++|.|.+..
T Consensus 204 ~~~~IR~~~~~~~I~i~~~~~~~~~~-~~~~~~~-~~~~~vv~d~H~Y~~f~ 253 (394)
T d2pb1a1 204 GYNSLRQTGSVTPVIIHDAFQVFGYW-NNFLTVA-EGQWNVVVDHHHYQVFS 253 (394)
T ss_dssp HHHHHHHTTCCCCEEEECTTCCTTTT-TTSSCGG-GTCCSEEEEEECCSCSS
T ss_pred HHHHHHHhCCCCeEEEcCCCcchhhh-hhhccCC-CCCceEEEeeecccccC
Confidence 99999999999999998765432211 0000111 13468999999998654
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Probab=99.96 E-value=6.4e-30 Score=261.89 Aligned_cols=294 Identities=12% Similarity=0.032 Sum_probs=188.4
Q ss_pred CCCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhh
Q 008330 36 GLPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQS 115 (570)
Q Consensus 36 ~~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s 115 (570)
+.+++++|++|+. +|+||+++|+|+... +.......++++++.|+++|||+||+++.........+.. . .
T Consensus 2 ~~~v~~~g~~f~~-nG~p~~~~G~N~~~~-----~~~~~~~~~~~~l~~~~~~G~N~iR~~~~~~~~~~~~~~~-~---~ 71 (344)
T d1qnra_ 2 SSFVTISGTQFNI-DGKVGYFAGTNCYWC-----SFLTNHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQ-I---W 71 (344)
T ss_dssp CCCCEEETTEEEE-TTEESCEEEEECGGG-----GGCCCHHHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTC-C---C
T ss_pred CCcEEEECCEEEE-CCEEEEEEEEccCCC-----CcCCCHHHHHHHHHHHHhcCCCEEEECCcccccccCCCCc-c---c
Confidence 4679999999985 899999999996421 2222334588999999999999999976554332211100 0 0
Q ss_pred hhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCcccc-------CCCCCCCCCCCCCCHH
Q 008330 116 FQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCS-------NSDGNGFFGDQYFNPD 188 (570)
Q Consensus 116 ~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~-------~~dgng~~~d~~~~~~ 188 (570)
+ .......++...+++.++.+|+++++|.++||+||||+|...+.+++. ......||.+. ...+
T Consensus 72 ~--------~~~~~~~~~~~~~~~~~~~ld~~~~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 142 (344)
T d1qnra_ 72 F--------QKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGINAYVNAFGGNATTWYTNT-AAQT 142 (344)
T ss_dssp S--------EECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTTSHHHHHHHHHCSCTTGGGGCH-HHHH
T ss_pred h--------hhcccccCccccCHHHHHHHHHHHHHHHHcCCeeEeeccCCccccccccccccccccccccccCCH-HHHH
Confidence 0 000011222334567899999999999999999999999765432210 00112344443 2357
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcc----
Q 008330 189 LWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQA---- 264 (570)
Q Consensus 189 ~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p---- 264 (570)
.+.+.|+.|++|||++|+|+++||.|||.....+...+..++++++++||+.||+++|++++..+...........
T Consensus 143 ~~~~~~~~~~~r~~~~p~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~ir~~d~~~~v~~~~~~~~~~~~~~~~~~~~~~ 222 (344)
T d1qnra_ 143 QYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDGAYPYTYGE 222 (344)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEESCBSCCCTTCCTHHHHHHHHHHHHHHHHHCSSSEEECCCCCCCCTTSCCCGGGSSSS
T ss_pred HHHHHHHHHHHHhCCCCceeeeccCCccCCCCCchhhhhHHHHHHHHHHHhhCCCCEEEEcccccccccccccccccccc
Confidence 7899999999999999999999999999876556678888899999999999999999998766554322111000
Q ss_pred -cC----cCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHH
Q 008330 265 -VN----LTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLN 339 (570)
Q Consensus 265 -~~----l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~ 339 (570)
.+ ....+..+|++|.|+... ... . ......++.......+.++||+|||||+...... ....|..
T Consensus 223 ~~d~~~~~~~~~~D~~~~H~Y~~~~----~~~--~---~~~~~~~~~~~~~~~~~~kPv~v~EfG~~~~~~~-~~~~~~~ 292 (344)
T d1qnra_ 223 GTDFAKNVQIKSLDFGTFHLYPDSW----GTN--Y---TWGNGWIQTHAAACLAAGKPCVFEEYGAQQNPCT-NEAPWQT 292 (344)
T ss_dssp SCCHHHHHTCTTCCSEEEEECHHHH----TCC--S---THHHHHHHHHHHHHHHTTSCEEEEEECCSSCHHH-HHHHHHH
T ss_pred ccchhhcccCCCceEEEEeecCccc----ccc--h---hHHHHHHHHHHHHHhhcCCCEEEEecCcCCCCCc-cHHHHHH
Confidence 00 012345589999996321 111 0 1112222322233345789999999999754211 1122222
Q ss_pred HHHHHHHHCCCceEEeccCce
Q 008330 340 CFFGVAAELDWDWALWTLVGS 360 (570)
Q Consensus 340 ~~~~~~~~~gigw~~W~~~G~ 360 (570)
... ..+..+|+++|++++.
T Consensus 293 ~~~--~~~~~~G~~~W~~~~~ 311 (344)
T d1qnra_ 293 TSL--TTRGMGGDMFWQWGDT 311 (344)
T ss_dssp HHH--TSTTEEEEEESCEECB
T ss_pred HHH--hccCcceEEEEEcCcc
Confidence 111 1233468999998644
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=2.1e-28 Score=259.65 Aligned_cols=245 Identities=17% Similarity=0.177 Sum_probs=158.0
Q ss_pred HHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEE
Q 008330 79 DMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~V 158 (570)
+++++.||++|||+||||+.++.+.... ..| ..+...+++||++|++|.++||+|
T Consensus 76 e~D~~~i~~~G~N~VRiPi~~~~~~~~~------------------------~~~-~~~~~~~~~ld~~v~~a~~~gl~V 130 (408)
T d1h4pa_ 76 EQDFANIASQGFNLVRIPIGYWAFQILD------------------------DDP-YVSGLQESYLDQAIGWARNNSLKV 130 (408)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGTCCCT------------------------TCC-CCCSSHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHCCCCEEEEeccHHHhcCCC------------------------CCC-CcChhHHHHHHHHHHHHHHCCCEE
Confidence 6789999999999999999998775410 111 223457899999999999999999
Q ss_pred EEecCCCCCCcccc---CCCCC-CCCCCCCCCHHHHHHHHHHHHHHhCCC---CcEEEEeccCCCCCCCCC-hhHHHHHH
Q 008330 159 ILDNHISKPGWCCS---NSDGN-GFFGDQYFNPDLWIKGLTKMATIFNGV---RNVVGMSLRNELRGPKQN-VKDWYRYM 230 (570)
Q Consensus 159 ILD~H~~~~~w~~~---~~dgn-g~~~d~~~~~~~~~~~w~~iA~ryk~~---p~Vig~dL~NEP~~~~~~-~~~W~~~~ 230 (570)
|||+|..++..... ...++ .|+.+. ..++++++|++||+||+++ +.|+||||+|||...... .+.+..++
T Consensus 131 ilDlH~~pG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ia~r~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~ 208 (408)
T d1h4pa_ 131 WVDLHGAAGSQNGFDNSGLRDSYKFLEDS--NLAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYL 208 (408)
T ss_dssp EEEEEECTTCSSCCGGGSSTTCCCTTSHH--HHHHHHHHHHHHHHHTTSHHHHTTEEEEESCSCCCGGGSCHHHHHHHTH
T ss_pred EEEeCCCCCCCcCCCCCCcccccccCCch--HHHHHHHHHHHHHHHhcccccccceeeeecccCccccccchHHHHHHHH
Confidence 99999986543211 11112 233322 3678899999999999997 679999999999875433 34567788
Q ss_pred HHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCc-CCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHH
Q 008330 231 QLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNL-TFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSG 309 (570)
Q Consensus 231 ~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l-~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g 309 (570)
++++++||+..|..++++-+..|... ...... +.. +...++|++.|.|.....+.. .....+..........
T Consensus 209 ~~~~~~iR~~~~~~~~iv~~d~~~~~-~~w~~~-~~~~~~~~~vv~D~H~Y~~f~~~~~-----~~s~~~~i~~~~~~~~ 281 (408)
T d1h4pa_ 209 APAYEYLRNNIKSDQVIIIHDAFQPY-NYWDDF-MTENDGYWGVTIDHHHYQVFASDQL-----ERSIDEHIKVACEWGT 281 (408)
T ss_dssp HHHHHHHHHTTCCCCCEEEECTTCCT-TGGGGS-SCGGGTCCSEEEEEEECSCSSHHHH-----TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccCceEEEecCCCCh-hhhhhh-cccCCCCceeEeeccceeeecCCcc-----cCChhhhhhhhhhhhh
Confidence 99999999876655544444344321 111110 010 123689999999986542100 0011111111111122
Q ss_pred HHHhcCCCeEEeccccCCCCCC---------------------------------------cc----hHHHHHHHHHHHH
Q 008330 310 FLLEQGWPLFVSEFGADLRGNN---------------------------------------VN----DNRYLNCFFGVAA 346 (570)
Q Consensus 310 ~l~~~g~Pv~iGEFG~~~~~~~---------------------------------------~~----~~~~~~~~~~~~~ 346 (570)
-..+...|+++|||+....+.. .. -.+|++..++.++
T Consensus 282 ~~~~~~~p~~vGEws~a~td~~~~~n~~g~~~~~~ge~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~r~~~eaQ~~~ye 361 (408)
T d1h4pa_ 282 GVLNESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYWSDERKENTRRYVEAQLDAFE 361 (408)
T ss_dssp HHTTCSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCCBTTBCCCBCSCCTTTTCGGGCCHHHHHHHHHHHHHHHHHHT
T ss_pred hhhcccCCcccccccccccchhhhcccccccceeecccccCCcCccccccccccCChhhCCHHHHHHHHHHHHHHHHHHh
Confidence 2234789999999987543200 00 1346666777774
Q ss_pred HCCCceEEeccC
Q 008330 347 ELDWDWALWTLV 358 (570)
Q Consensus 347 ~~gigw~~W~~~ 358 (570)
.+.||+||+||
T Consensus 362 -~~~GW~fWt~K 372 (408)
T d1h4pa_ 362 -MRGGWIIWCYK 372 (408)
T ss_dssp -TTTEEEESCSC
T ss_pred -cCCCEEEeeee
Confidence 57899999998
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Probab=99.95 E-value=2.5e-28 Score=247.02 Aligned_cols=281 Identities=15% Similarity=0.133 Sum_probs=178.4
Q ss_pred CeEecCCeEEcCCCCEEEEEEeeCCCCCC-ccccCCCCC---ChHHHHHHHHHHcCCcEEEecccccccccCccccchhh
Q 008330 38 PLSTNSRWIVDENGHRVKLACVNWVSHLE-PVVAEGLSK---QPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVR 113 (570)
Q Consensus 38 ~L~t~G~~IVd~~G~~v~L~GVNw~g~~~-~~v~~Gl~~---~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~ 113 (570)
.|+++|++|+ .+|+|++|+|||+.+... ...+++.+. ..++++++.||++|||+|||++.++.......
T Consensus 1 ~~~~~g~~f~-~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~N~vRv~~~~~~~~~~~~------ 73 (350)
T d2c0ha1 1 RLSVSGTNLN-YNGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEF------ 73 (350)
T ss_dssp CEEEETTEEE-ETTEEECEEEEECCCSSTTCSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEE------
T ss_pred CEEEECCEEE-ECCEEEEEEEEecCCcccccccCcccCCCCHHHHHHHHHHHHHcCCCEEEECcccCccCCccc------
Confidence 4899999998 699999999999764431 111222222 23678899999999999999887643211000
Q ss_pred hhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCC-CCCCCCCCCCHHHHHH
Q 008330 114 QSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDG-NGFFGDQYFNPDLWIK 192 (570)
Q Consensus 114 ~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dg-ng~~~d~~~~~~~~~~ 192 (570)
.....|...+.++++.++++|++|.++|||||||+|.... +....... +.++.++ .-.+.+.+
T Consensus 74 --------------~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~vi~d~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~ 137 (350)
T d2c0ha1 74 --------------DNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAV-KQSTHYRLNGLMVDTR-KLQSYIDH 137 (350)
T ss_dssp --------------CTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEEEECSC-CCTTHHHHHHHHHCHH-HHHHHHHH
T ss_pred --------------ccCCCCCccChhhhHHHHHHHHHHHHCCCEEEEEeccccc-cCCCCcccCcccCCCH-HHHHHHHH
Confidence 0111233346678999999999999999999999998642 11000000 0111111 11466778
Q ss_pred HHHHHHHHhCCCCcEEEEeccCCCCCCC---------------------------CChhHHHHHHHHHHHHHHhcCCCcE
Q 008330 193 GLTKMATIFNGVRNVVGMSLRNELRGPK---------------------------QNVKDWYRYMQLGAEAVHAANPEVL 245 (570)
Q Consensus 193 ~w~~iA~ryk~~p~Vig~dL~NEP~~~~---------------------------~~~~~W~~~~~~~~~aIr~~dp~~l 245 (570)
+|++||+||+++|+|+++||+|||.... .....+..++++++.+||+++|+++
T Consensus 138 ~~~~~a~r~~~~psv~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 217 (350)
T d2c0ha1 138 ALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPGAM 217 (350)
T ss_dssp THHHHHHHHTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHhCCCCCEEEEEEecccccccCccccccccccccchhcccccccccccccHHHHHHHHHHHHHHHHHhCCCce
Confidence 9999999999999999999999996421 1245677888999999999999999
Q ss_pred EEEeCCC--CCCcchh------hhh--cccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcC
Q 008330 246 VILSGLN--FDKDLSF------VRN--QAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQG 315 (570)
Q Consensus 246 IiVeG~~--w~~dl~~------~~~--~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g 315 (570)
|.++... +..+... ... ...........+|++|.|..... +........ .......+
T Consensus 218 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~y~~~~~--~~~~~~~~~-----------~~~~~~~~ 284 (350)
T d2c0ha1 218 VTVGSWNMKADTDAMGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQNH--FGNESPFKH-----------SFSNFRLK 284 (350)
T ss_dssp EEEEESCGGGBCSSTTCCBTTSHHHHHHHHCCTTCCCSSEEEECCCBTTB--CCTTCTTSS-----------CGGGGCCS
T ss_pred EEecccccCcCcccccccccccccccchhhcccccccceeccccCCCCCc--chhhhhHHH-----------HHHhccCC
Confidence 9886432 1111000 000 00111223566899999985432 111100000 00012267
Q ss_pred CCeEEeccccCCCCCCcchHHHHHHHHHHHHHCCC-ceEEeccCc
Q 008330 316 WPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELDW-DWALWTLVG 359 (570)
Q Consensus 316 ~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~gi-gw~~W~~~G 359 (570)
.||+|||||...... .+.+.+++.+.+++. |+++|+++.
T Consensus 285 kPv~igEfg~~~~~~-----~~~~~~~~~~~~~~~~G~~~W~~~d 324 (350)
T d2c0ha1 285 KPMVIGEFNQEHGAG-----MSSESMFEWAYTKGYSGAWTWSRTD 324 (350)
T ss_dssp SCEEEEECCGGGSTT-----CCHHHHHHHHHHTTCSEEEESCSSS
T ss_pred CcEEEEecCCCCCCC-----ccHHHHHHHHHHhCCeEEEEEeeec
Confidence 899999999876543 233455666777775 678999863
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Probab=99.95 E-value=6.3e-27 Score=240.32 Aligned_cols=310 Identities=13% Similarity=0.144 Sum_probs=192.6
Q ss_pred CCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhh
Q 008330 37 LPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSF 116 (570)
Q Consensus 37 ~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~ 116 (570)
.+++|+|++|.- +|+|+.++|+|...... ..........++++++.||++|||+||+++..+.... +
T Consensus 2 ~~v~~~g~~f~~-nG~~~~~~G~N~~~~~~-~~~~~~~~~~~~~~l~~~k~~G~N~vR~~~~~~~~~~------~----- 68 (370)
T d1rh9a1 2 NFVYTDGTHFAL-NGKSLYINGFNAYWLMY-IAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSR------P----- 68 (370)
T ss_dssp CCCEEETTEEEE-TTEEECEEEEECTTHHH-HHHSTTTTHHHHHHHHHHHHTTCCEEEEESSCSSSSS------C-----
T ss_pred CcEEEECCEEEE-CCEEEEEEEEecccCcc-cccCCCCHHHHHHHHHHHHHCCCeEEEECCccCccCc------c-----
Confidence 478999999874 79999999999432110 1112334456889999999999999999754322111 0
Q ss_pred hhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCC---------ccccCC----CCCCCCCCC
Q 008330 117 QKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPG---------WCCSNS----DGNGFFGDQ 183 (570)
Q Consensus 117 ~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~---------w~~~~~----dgng~~~d~ 183 (570)
....|...+.+.++.||++|++|.++||+||+|+|...+. |++... ....||.+.
T Consensus 69 ------------~~~~~g~~~~~~l~~ld~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (370)
T d1rh9a1 69 ------------LQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNP 136 (370)
T ss_dssp ------------SEEETTEECHHHHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHHTTCCCCCGGGGGTCH
T ss_pred ------------cCCCCCcccHHHHHHHHHHHHHHHHcCCEEEEecccccccccCCcccccccccCCCcCCccccccCCH
Confidence 1223455677899999999999999999999999975321 111110 111233332
Q ss_pred CCCHHHHHHHHHHHHHH--------hCCCCcEEEEeccCCCCCCC-CChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCC
Q 008330 184 YFNPDLWIKGLTKMATI--------FNGVRNVVGMSLRNELRGPK-QNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFD 254 (570)
Q Consensus 184 ~~~~~~~~~~w~~iA~r--------yk~~p~Vig~dL~NEP~~~~-~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~ 254 (570)
...+.+.+.|+.+++| |++++.|+++|+.|||.... .+...+.+++++++++||++||+++|++++..+.
T Consensus 137 -~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~dp~~~v~~~~~~~~ 215 (370)
T d1rh9a1 137 -MVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFY 215 (370)
T ss_dssp -HHHHHHHHHHHHHHHCBCTTTCSBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHHCCSSEEECCCCCCC
T ss_pred -HHHHHHHHHHHHHHHhhhhhhHhhhcCCceeeeeccccccccCCccchHHHHHHHHHHHHHHHhhCCCCeEEEeccccc
Confidence 1246778999999987 58999999999999997653 3556788889999999999999999999876542
Q ss_pred Ccchh-hhhcc--------cCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHH-HHHHHHHHHhcCCCeEEeccc
Q 008330 255 KDLSF-VRNQA--------VNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDN-VMRLSGFLLEQGWPLFVSEFG 324 (570)
Q Consensus 255 ~dl~~-~~~~p--------~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~-~~~~~g~l~~~g~Pv~iGEFG 324 (570)
..... ..... .........++++|.|+.... .............. +..........+.||+|||||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~h~Y~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~kPv~i~EfG 291 (370)
T d1rh9a1 216 GNDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQWL----PGLTQEAQDKWASQWIQVHIDDSKMLKKPLLIAEFG 291 (370)
T ss_dssp CGGGGGGSGGGCCCSCCHHHHHTSTTCCCEEEECCHHHHS----TTSCHHHHHHHHHHHHHHHHHHHHHHTSCEEEEECC
T ss_pred cccccccCCCcccccccccccccCCcceEEEeccccCccc----cCCcchhhhhHHHHHHHHHHHHHHhCCCeEEEeecc
Confidence 21111 00000 000112345899999963211 11111111111111 122222233478999999999
Q ss_pred cCCCCCCc---chHHHHH----HHHHHHHHCC--CceEEeccCceeecccCccCCCceeeeecCCC
Q 008330 325 ADLRGNNV---NDNRYLN----CFFGVAAELD--WDWALWTLVGSYYLREGVIGLNEYYGLFDWNW 381 (570)
Q Consensus 325 ~~~~~~~~---~~~~~~~----~~~~~~~~~g--igw~~W~~~G~y~~r~~~~~~~et~Gll~~dw 381 (570)
........ ....+++ .+.+.+.+.. .||++|++.+. +.+...+.||++..|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~-----~~~~~~dg~g~~~~d~ 352 (370)
T d1rh9a1 292 KSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQ-----GMSSFDDGYQVVLQES 352 (370)
T ss_dssp CCTTSTTCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCBCCT-----TCGGGCCSCCBCGGGC
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEeeecCC-----CCcCCCCCceEecCCC
Confidence 87654321 1223333 3334443332 47999998642 2233455688887654
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Probab=99.93 E-value=3.4e-25 Score=229.06 Aligned_cols=302 Identities=14% Similarity=0.109 Sum_probs=185.8
Q ss_pred CCeEecCCeEEcCCCCEEEEEEeeCCCCC-CccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhh
Q 008330 37 LPLSTNSRWIVDENGHRVKLACVNWVSHL-EPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQS 115 (570)
Q Consensus 37 ~~L~t~G~~IVd~~G~~v~L~GVNw~g~~-~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s 115 (570)
-+++|+|++|+- +|++++++|+|+.... ............++++++.||++|+|+||+++.+.....+..
T Consensus 2 ~~v~~~g~~f~~-nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~iR~~~~~~~~~~~~~-------- 72 (410)
T d1uuqa_ 2 HFVRVNGGHFEL-QGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSA-------- 72 (410)
T ss_dssp CCCEEETTEEEE-TTEEECEEEEECTTHHHHTCSSTTCCHHHHHHHHHHHHHTTCCEEEEECCCBCCCSTTS--------
T ss_pred CCEEEECCEEEE-CCEEEEEEEEecCCcccccccCCCCCHHHHHHHHHHHHHCCCcEEEeCCcccccccccc--------
Confidence 368999998874 7999999999975321 111233444456789999999999999999876543221100
Q ss_pred hhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCC---------ccccCCCC----------
Q 008330 116 FQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPG---------WCCSNSDG---------- 176 (570)
Q Consensus 116 ~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~---------w~~~~~dg---------- 176 (570)
........|...++..|+.+|++|++|.++||+||+|+|..... |.......
T Consensus 73 ---------~~~~~~~~~g~~de~gl~~~d~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 143 (410)
T d1uuqa_ 73 ---------VKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEA 143 (410)
T ss_dssp ---------CSSCSBSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHHHHHHHHTCCCCCHHHHCCHHH
T ss_pred ---------cCCCcccccccccHHHHHHHHHHHHHHHHcCCeeEEeccccccccCCcccccccccCCCcCcccccccccc
Confidence 00112345566788899999999999999999999999975321 11000000
Q ss_pred -----CCCCCCCCCCHHHHHHHHHHHHHH--------hCCCCcEEEEeccCCCCCCCC-----ChhHHHHHHHHHHHHHH
Q 008330 177 -----NGFFGDQYFNPDLWIKGLTKMATI--------FNGVRNVVGMSLRNELRGPKQ-----NVKDWYRYMQLGAEAVH 238 (570)
Q Consensus 177 -----ng~~~d~~~~~~~~~~~w~~iA~r--------yk~~p~Vig~dL~NEP~~~~~-----~~~~W~~~~~~~~~aIr 238 (570)
+.++.+. ...+.+.+.|+++++| |+++|.|++++|.|||..... ..+.+..++++++++||
T Consensus 144 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~l~NE~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 222 (410)
T d1uuqa_ 144 FMAKSASFYRSE-KAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIK 222 (410)
T ss_dssp HHHHHHGGGGCH-HHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCH-HHHHHHHHHHHHHHHhhhhhhhHhhcCChhHhhhhhccccCCccCcccccchhhhhHHHHHHHhhhh
Confidence 0011111 1145678889999987 789999999999999986532 24567788899999999
Q ss_pred hcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHH-------HHHHHHHH
Q 008330 239 AANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDN-------VMRLSGFL 311 (570)
Q Consensus 239 ~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~-------~~~~~g~l 311 (570)
++||+++|+++...+....................++++|.|+.... +... .......... ...+....
T Consensus 223 ~~dp~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~h~Y~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (410)
T d1uuqa_ 223 TLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWS--WFDK--TKPAETWPSAWEKAQNYMRAHIDVA 298 (410)
T ss_dssp HHCSSSEEECCCCSGGGTTTCHHHHHHHHCSTTCCSEEEEECTTTTT--SSCT--TSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCceEeecccccccccccccchhhhccCCccceEEeecCccccc--cccc--ccccccccchhhhhHHHHHHHHHHH
Confidence 99999999998655432221111000001123456789999974332 1111 1111111111 11122222
Q ss_pred HhcCCCeEEeccccCCCCCCc-------chHHHHHHHHHH----HHHC--CCceEEeccCcee
Q 008330 312 LEQGWPLFVSEFGADLRGNNV-------NDNRYLNCFFGV----AAEL--DWDWALWTLVGSY 361 (570)
Q Consensus 312 ~~~g~Pv~iGEFG~~~~~~~~-------~~~~~~~~~~~~----~~~~--gigw~~W~~~G~y 361 (570)
...+.|++|+|||........ ....+++.+++. ++.. .+|+++|.|++.+
T Consensus 299 ~~~~kPv~i~E~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~ 361 (410)
T d1uuqa_ 299 KQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWNGYG 361 (410)
T ss_dssp HHHTCCEEEEEECCCCGGGCCCTTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEEETC
T ss_pred hhcCCCeeeeccccccCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEecccCCC
Confidence 337899999999986643211 123444443333 3322 2689999997654
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Probab=99.78 E-value=3.2e-18 Score=179.36 Aligned_cols=261 Identities=13% Similarity=0.137 Sum_probs=157.5
Q ss_pred EEEEeeCCCCCCccccCCCCC----ChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCccc
Q 008330 55 KLACVNWVSHLEPVVAEGLSK----QPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQS 130 (570)
Q Consensus 55 ~L~GVNw~g~~~~~v~~Gl~~----~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~ 130 (570)
.+||+++....+ +-..|... ...++.++.||++|||+||||+-...... .
T Consensus 14 f~~g~d~s~~~~-~e~~g~~~~~~~g~~~d~~~~lk~~G~n~VRl~vw~~~~~~-------------------------~ 67 (387)
T d1ur4a_ 14 FIKGVDVSSIIA-LEESGVAFYNESGKKQDIFKTLKEAGVNYVRVRIWNDPYDA-------------------------N 67 (387)
T ss_dssp CEEEEECTTHHH-HHHTTCCCBCTTSCBCCHHHHHHHTTCCEEEEEECSCCBCT-------------------------T
T ss_pred cEEEEechhHHH-HHhCCCEEECCCCCcccHHHHHHHcCCCEEEeecccCCccc-------------------------c
Confidence 479999865421 11122211 12356799999999999999993321111 1
Q ss_pred CCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCC-CCCCCCCCCC--HHHHHHHHHHHHHHhCCC-Cc
Q 008330 131 NNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDG-NGFFGDQYFN--PDLWIKGLTKMATIFNGV-RN 206 (570)
Q Consensus 131 ~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dg-ng~~~d~~~~--~~~~~~~w~~iA~ryk~~-p~ 206 (570)
.+|...+...++++++++++|+++||+||||+|..+ .|....... ..-|.+..+. .+...++-+.++++++++ ..
T Consensus 68 ~~~~~~g~~~l~~~~~~~~~a~~~Gl~v~ldlH~sd-~wadp~~q~~p~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (387)
T d1ur4a_ 68 GNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSD-FWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAGID 146 (387)
T ss_dssp CCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSS-SCCSSSCCCCCGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCcCCCccccHHHHHHHHHHHHHCCCEEEEEeCCCC-CCcCCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHhhcCCC
Confidence 122223445689999999999999999999999864 454221111 1112221110 122233344556666555 44
Q ss_pred EEEEeccCCCCCCC---CChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCC--cchhhhhcccCcCCCCCEEEEEeecC
Q 008330 207 VVGMSLRNELRGPK---QNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDK--DLSFVRNQAVNLTFTGKLVFEAHWYG 281 (570)
Q Consensus 207 Vig~dL~NEP~~~~---~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~--dl~~~~~~p~~l~~~~nlVys~H~Y~ 281 (570)
+..+||.|||.... .+...+.+++++++++||+++|+..|++...+.+. ....+.+. +.....+..++.+|+|+
T Consensus 147 ~~~~eigNE~~~~~~~~~~~~~~~~ll~~~~~avr~~dp~~~vi~~~~~~~~~~~~~~~~~~-~~~~~~~~d~ig~s~Y~ 225 (387)
T d1ur4a_ 147 IGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETSGRYAWIAET-LHRHHVDYDVFASSYYP 225 (387)
T ss_dssp EEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTSTTHHHHHHHH-HHHTTCCCSEEEEEECT
T ss_pred ccEEEEecCCCcCccCcCCHHHHHHHHHHHHHHHHhcCCCceEEEeccCccchHHHHHHHHH-HHhcCCCcccccceeec
Confidence 66799999998642 36788999999999999999999988886443222 11111111 11112356799999998
Q ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC---------------------cchHHHHHH
Q 008330 282 FTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN---------------------VNDNRYLNC 340 (570)
Q Consensus 282 ~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~---------------------~~~~~~~~~ 340 (570)
+... ...++...+... ..+.+.||+|+|++.+....+ .....|++.
T Consensus 226 ~w~~----------~~~~~~~~l~~l---~~~~~k~v~v~E~~~~~t~~~~d~~~~~~~~~~~~~~~p~s~~gQ~~~l~~ 292 (387)
T d1ur4a_ 226 FWHG----------TLKNLTSVLTSV---ADTYGKKVMVAETSYTYTAEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRD 292 (387)
T ss_dssp TTSC----------CHHHHHHHHHHH---HHHHCCEEEEEEECCCSCSCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHH
T ss_pred ccCc----------cHHHHHHHHHHH---HHHhCCceEEEEecccccCCCccccCccCCCccccccCCCCHHHHHHHHHH
Confidence 6542 112233333221 123689999999998754211 012457777
Q ss_pred HHHHHHHC---CCceEEec
Q 008330 341 FFGVAAEL---DWDWALWT 356 (570)
Q Consensus 341 ~~~~~~~~---gigw~~W~ 356 (570)
+.+.+... |+|++||-
T Consensus 293 l~~~~~~~~~~G~G~~YWe 311 (387)
T d1ur4a_ 293 VIQAVSDVGEAGIGVFYWE 311 (387)
T ss_dssp HHHHHHTTCTTEEEEEEEC
T ss_pred HHHHHHhcCCCceEEEEec
Confidence 77776643 68999995
|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Glucuronidase, domain 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=5.7e-17 Score=162.11 Aligned_cols=270 Identities=13% Similarity=0.050 Sum_probs=160.4
Q ss_pred eEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhh
Q 008330 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQK 118 (570)
Q Consensus 39 L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~ 118 (570)
++++|++|. -+|+||.|||+||.... +....+.....+..+++.||++|+|+||+.-..+
T Consensus 1 v~v~~~~f~-lNG~~~~lrG~~~~~~~-~~~g~~~~~~~~~~d~~~~k~~G~N~iR~~~~~~------------------ 60 (304)
T d1bhga3 1 VAVTKSQFL-INGKPFYFHGVNKHEDA-DIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPY------------------ 60 (304)
T ss_dssp EEECSSCEE-ETTEECCEEEEECCSCB-TTTBTCCCHHHHHHHHHHHHHHTCCEEECTTSCC------------------
T ss_pred CEEECCEEE-ECCEEEEEEeEEcCCCC-CccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCC------------------
Confidence 467776654 39999999999985432 1222333445577889999999999999832110
Q ss_pred ccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 008330 119 LGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMA 198 (570)
Q Consensus 119 lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA 198 (570)
-+.+.+.|.++||+|+.|++.... . ... +.+. ...+.+.+.++.++
T Consensus 61 -------------------------~~~~~~~cD~~Gilv~~e~~~~~~----~---~~~-~~~~-~~~~~~~~~~~~~i 106 (304)
T d1bhga3 61 -------------------------AEEVMQMCDRYGIVVIDECPGVGL----A---LPQ-FFNN-VSLHHHMQVMEEVV 106 (304)
T ss_dssp -------------------------SSTHHHHHSTTCCEEEECCSCCCT----T---SSG-GGSH-HHHHHHHHHHHHHH
T ss_pred -------------------------hHHHHHHHHhcCCeeeeccccccc----c---ccc-ccch-HHHHHHHHHHHHHH
Confidence 023677899999999999864311 0 000 1111 12467888999999
Q ss_pred HHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcchhhhhcccCcCCCCCEEEEEe
Q 008330 199 TIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDLSFVRNQAVNLTFTGKLVFEAH 278 (570)
Q Consensus 199 ~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~~~~~~p~~l~~~~nlVys~H 278 (570)
++++++|.|+++++.|||... ......+.++.++.||+.||.++|.......... ... ....-++..|
T Consensus 107 ~~~rnhPsI~~w~~~NE~~~~---~~~~~~~~~~~~~~ik~~Dptrpv~~~~~~~~~~-~~~--------~~~~d~~~~~ 174 (304)
T d1bhga3 107 RRDKNHPAVVMWSVANEPASH---LESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAA-DKG--------APYVDVICLN 174 (304)
T ss_dssp HHHTTCSSEEEEEEEESCCTT---SHHHHHHHHHHHHHHHTTCCSSCEEEEBCCCTTT-CSS--------GGGCSSEEEE
T ss_pred HHhcCCCcHHHhccCCCCCcc---cchhhhhhHHHHHHHHhhCCCCceeeeccccccc-ccc--------cccccccccc
Confidence 999999999999999999764 2334566678889999999999988865432211 000 0112245777
Q ss_pred ecCCCCCCCCCCCCCcchhhHHHHHHHHH-HHHHHhcCCCeEEeccccCCCCCCc----------chHHHHHHHHHHHHH
Q 008330 279 WYGFTDGQAWVDGNPNQVCGRVVDNVMRL-SGFLLEQGWPLFVSEFGADLRGNNV----------NDNRYLNCFFGVAAE 347 (570)
Q Consensus 279 ~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~-~g~l~~~g~Pv~iGEFG~~~~~~~~----------~~~~~~~~~~~~~~~ 347 (570)
.|.... ..... .......+... -.+....+.|++++|||........ ....+++.....+..
T Consensus 175 ~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~e~g~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 247 (304)
T d1bhga3 175 SYYSWY-----HDYGH--LELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQ 247 (304)
T ss_dssp CCTTSS-----SSTTC--HHHHHHHHHHHHHHHHHHSCSCEEEEECCCCCCTTCCCSSCCSSCHHHHHHHHHHHHHHHHH
T ss_pred cccccc-----ccccc--hhhhhhhhhHHHHHhhccCCCCeEEecchhhcccccCCCcccccCHHHHHHHHHHHHHHHHH
Confidence 775321 11111 01111112111 1222347899999999986543211 112333333333333
Q ss_pred CC----CceEEeccCceeeccc--CccCCCceeeeecCCCCC
Q 008330 348 LD----WDWALWTLVGSYYLRE--GVIGLNEYYGLFDWNWCD 383 (570)
Q Consensus 348 ~g----igw~~W~~~G~y~~r~--~~~~~~et~Gll~~dw~~ 383 (570)
.. +|-++|++.. |..+ +....+..+||++.+...
T Consensus 248 ~~~~~~~G~~~w~~~D--~~~~~~~~~~~~~~~Gl~d~~~~P 287 (304)
T d1bhga3 248 KRRKYVVGELIWNFAD--FMTEQSPTRVLGNKKGIFTRQRQP 287 (304)
T ss_dssp HTTTTEEEEEEEESBC--BCCCCBTTBSSSBCCCSBCTTSCB
T ss_pred hCCCCeEEEEEeeeEe--cCCCCCCCCCCccccccCCCCCCC
Confidence 22 4667898752 2222 122223467999988543
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Probab=99.70 E-value=1.9e-16 Score=160.52 Aligned_cols=256 Identities=12% Similarity=0.067 Sum_probs=155.0
Q ss_pred HHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEE
Q 008330 79 DMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~V 158 (570)
+++++.||++|||+||||+ | .+. + .+...|++++++|+.|.++||+|
T Consensus 30 ~~~~~~lk~~G~n~VRi~v-W---~~p-----~------------------------~g~~~~~~~~~~v~~a~~~gl~v 76 (332)
T d1hjsa_ 30 QPLENILAANGVNTVRQRV-W---VNP-----A------------------------DGNYNLDYNIAIAKRAKAAGLGV 76 (332)
T ss_dssp CCHHHHHHHTTCCEEEEEE-C---SSC-----T------------------------TCTTSHHHHHHHHHHHHHTTCEE
T ss_pred ccHHHHHHHcCCCEEEeee-e---ecC-----C------------------------CCccCHHHHHHHHHHHHHCCCEE
Confidence 5678999999999999997 5 120 0 01235899999999999999999
Q ss_pred EEecCCCCCCccccCCCC-CCCCCCCC-CCHHHHHHHHHHHHHHhCCCCcEEE-EeccCCCCCC-------CCChhHHHH
Q 008330 159 ILDNHISKPGWCCSNSDG-NGFFGDQY-FNPDLWIKGLTKMATIFNGVRNVVG-MSLRNELRGP-------KQNVKDWYR 228 (570)
Q Consensus 159 ILD~H~~~~~w~~~~~dg-ng~~~d~~-~~~~~~~~~w~~iA~ryk~~p~Vig-~dL~NEP~~~-------~~~~~~W~~ 228 (570)
|||+|.++ .|....... ...|.... .-.+.+.++|++++++||++...+. +++-|||... ......+.+
T Consensus 77 il~~h~~~-~wa~~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~~k~~~~~~~~~~i~nE~n~g~~w~~~~~~~~~~~~~ 155 (332)
T d1hjsa_ 77 YIDFHYSD-TWADPAHQTMPAGWPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIAR 155 (332)
T ss_dssp EEEECCSS-SCCBTTBCBCCTTCCCSHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHH
T ss_pred EEEecCCc-cccCccccCCCcccccchhHHHHHHHHHHHHHHHHHHhcCCchhHhhhccccCCcccCccCCcchHHHHHH
Confidence 99999864 564221111 11222211 1145678899999999998877654 5677777532 124567778
Q ss_pred HHHHHHHHHHhcCC--CcEEEEeCCC-CCCc--chh---hhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhhHH
Q 008330 229 YMQLGAEAVHAANP--EVLVILSGLN-FDKD--LSF---VRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRV 300 (570)
Q Consensus 229 ~~~~~~~aIr~~dp--~~lIiVeG~~-w~~d--l~~---~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~ 300 (570)
+++.++++||+.++ ...|++.+.. .... ..+ +...+.. ...+-.++++|.|++... . . ....+
T Consensus 156 l~~~a~~av~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~ig~~~Y~~~~~-----~-~--~~~~~ 226 (332)
T d1hjsa_ 156 LLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQNWWYTNVLKQGTL-ELSDFDMMGVSFYPFYSS-----S-A--TLSAL 226 (332)
T ss_dssp HHHHHHHHHHTSCCSSCCEEEEEESCTTCHHHHHHHHHHHHTTSSS-CGGGCCEEEEECCSSSCT-----T-C--CHHHH
T ss_pred HHHHHHHHHHhhccCCCcceeecccCcCchhhhhhHHHHHHhcCcc-cCCccceEeeeecCCCCC-----C-C--CHHHH
Confidence 88999999999764 4444443322 1111 011 1111111 111346889999986432 1 0 11222
Q ss_pred HHHHHHHHHHHHhcCCCeEEeccccCCCCCC----------------cchHHHHHHHHHHHHH--CCCceEEeccCceee
Q 008330 301 VDNVMRLSGFLLEQGWPLFVSEFGADLRGNN----------------VNDNRYLNCFFGVAAE--LDWDWALWTLVGSYY 362 (570)
Q Consensus 301 ~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~----------------~~~~~~~~~~~~~~~~--~gigw~~W~~~G~y~ 362 (570)
.+.+.+ .....+.|++|.|+|....... +...+|++.++..+.+ +++|.+||.-. ++
T Consensus 227 ~~~~~~---~~~~~g~~v~i~E~~~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~~~~~~~~~~~~~~g~G~~yW~~~--~~ 301 (332)
T d1hjsa_ 227 KSSLDN---MAKTWNKEIAVVETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSSVSRGVGLFYWEPA--WI 301 (332)
T ss_dssp HHHHHH---HHHHHCCEEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEECTT--CG
T ss_pred HHHHHH---HHHHhCCceEEEEeccccccccccccccccccCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEecCc--cc
Confidence 333322 2233689999999998653221 1246888888888877 46789999521 11
Q ss_pred cccCccCCCceeeeecCCCC
Q 008330 363 LREGVIGLNEYYGLFDWNWC 382 (570)
Q Consensus 363 ~r~~~~~~~et~Gll~~dw~ 382 (570)
-..+.-+..+.+||++.|..
T Consensus 302 ~~~~~g~~~~~~gLfd~~g~ 321 (332)
T d1hjsa_ 302 HNANLGSSCADNTMFSQSGQ 321 (332)
T ss_dssp GGTTTTSSSSBCCSBCTTSB
T ss_pred CCCCCCCccCCCceECCCCC
Confidence 11112233467899998743
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Probab=99.65 E-value=6.1e-15 Score=151.15 Aligned_cols=257 Identities=16% Similarity=0.156 Sum_probs=157.2
Q ss_pred HHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEE
Q 008330 79 DMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~V 158 (570)
++.++.||++|||.|||++ | .+ |. .+...++.++++++.|+++||+|
T Consensus 30 ~d~~~~lk~~G~n~VRlrv-W---~~----------------------------p~-~g~~~~~~~~~~~~~a~~~Gm~v 76 (334)
T d1foba_ 30 QALETILADAGINSIRQRV-W---VN----------------------------PS-DGSYDLDYNLELAKRVKAAGMSL 76 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEE-C---SC----------------------------CT-TCTTCHHHHHHHHHHHHHTTCEE
T ss_pred ccHHHHHHHcCCCEEEeee-e---eC----------------------------CC-CCcCcHHHHHHHHHHHHHCCCEE
Confidence 4567889999999999998 3 11 00 01235789999999999999999
Q ss_pred EEecCCCCCCccccCCC--CCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCc-EEEEeccCCCCCC-------CCChhHH
Q 008330 159 ILDNHISKPGWCCSNSD--GNGFFGDQY--FNPDLWIKGLTKMATIFNGVRN-VVGMSLRNELRGP-------KQNVKDW 226 (570)
Q Consensus 159 ILD~H~~~~~w~~~~~d--gng~~~d~~--~~~~~~~~~w~~iA~ryk~~p~-Vig~dL~NEP~~~-------~~~~~~W 226 (570)
|||+|.++ .|...... ... |.+.. ..++++.++|++++++||++.. +..+++-|||... ..+.+.+
T Consensus 77 ll~~hysd-~Wadp~~q~~P~a-w~~~~~~~~~~~~~~~t~~v~~~~k~~~~~~~~vqIgNE~n~g~~w~~g~~~~~~~~ 154 (334)
T d1foba_ 77 YLDLHLSD-TWADPSDQTTPSG-WSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNI 154 (334)
T ss_dssp EEEECCSS-SCCBTTBCBCCTT-SCSSCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHH
T ss_pred EEEecCCC-cccCCCcCCCccc-ccccccccHHHHHHHHHHHHHHHHHhcCCCceEEEcccccCccccCCCCCCCCHHHH
Confidence 99999874 56422111 112 22211 1256788999999999998855 5568999998643 1355677
Q ss_pred HHHHHHHHHHHHhcCC--CcEEEEeCCC-CCCc--chh---hhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCCcchhh
Q 008330 227 YRYMQLGAEAVHAANP--EVLVILSGLN-FDKD--LSF---VRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNPNQVCG 298 (570)
Q Consensus 227 ~~~~~~~~~aIr~~dp--~~lIiVeG~~-w~~d--l~~---~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~ 298 (570)
.++++.++++||+++| ...|++-... .+.+ ..+ +...-. ....+--|+.+|+|++... .. .-.
T Consensus 155 a~ll~a~~~aVr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~Dvig~syYp~w~~-----~~---~l~ 225 (334)
T d1foba_ 155 GALLHSGAWGVKDSNLATTPKIMIHLDDGWSWDQQNYFYETVLATGE-LLSTDFDYFGVSYYPFYSA-----SA---TLA 225 (334)
T ss_dssp HHHHHHHHHHHHTSCCSSCCEEEEEESCTTCHHHHHHHHHHHHHTSS-SCGGGCCEEEEECCSSSCT-----TC---CHH
T ss_pred HHHHHHHHHHHHHhhcccccceeeecccCCChhhhHHHHHHHHhcCC-CCCCCcCeEEEecCCCCCC-----cc---cHH
Confidence 7888999999999986 3444443222 1111 111 111100 0001224999999986432 11 112
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCc----------------chHHHHHHHHHHHHH--CCCceEEeccCce
Q 008330 299 RVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNV----------------NDNRYLNCFFGVAAE--LDWDWALWTLVGS 360 (570)
Q Consensus 299 ~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~----------------~~~~~~~~~~~~~~~--~gigw~~W~~~G~ 360 (570)
.+.+.+... ..+.+.||+|.|+|.+...++. ...+|+..+...+.+ .|+|.+||.= .
T Consensus 226 ~l~~~l~~l---~~~y~k~v~I~Et~~~~t~~~~~~~~~~~~~~~p~s~~gQa~yl~~~~~~~~~~~~G~G~~YWep--~ 300 (334)
T d1foba_ 226 SLKTSLANL---QSTYDKPVVVVETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYWEP--A 300 (334)
T ss_dssp HHHHHHHHH---HHHHCCCEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEECT--T
T ss_pred HHHHHHHHH---HHHhCCceEEEEecccccCCcccccccccccCCCCCHHHHHHHHHHHHHHHhhcCCceEEEEeCC--C
Confidence 333333321 1236899999999987653321 136788888888765 4789999972 2
Q ss_pred eecccCccCCCceeeeecCCCCCc
Q 008330 361 YYLREGVIGLNEYYGLFDWNWCDI 384 (570)
Q Consensus 361 y~~r~~~~~~~et~Gll~~dw~~~ 384 (570)
++...|.-..-|.-+|++.+-..+
T Consensus 301 w~~~~g~G~~~~n~~lfD~~~~~~ 324 (334)
T d1foba_ 301 WIGNAGLGSSCADNLMVDYTTDEV 324 (334)
T ss_dssp CTTCTTTTSSSSBCCSBCTTTCBB
T ss_pred cccCCCCCcchhhcccccCCCCcc
Confidence 222222222235567887654444
|
| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-D-xylosidase, catalytic domain species: Thermoanaerobacterium saccharolyticum [TaxId: 28896]
Probab=99.51 E-value=1.8e-13 Score=137.93 Aligned_cols=248 Identities=11% Similarity=0.152 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCC---CCCCCHHHHHHHHHHHHHHhCCC-----CcEEEEec
Q 008330 141 IKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFG---DQYFNPDLWIKGLTKMATIFNGV-----RNVVGMSL 212 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~---d~~~~~~~~~~~w~~iA~ryk~~-----p~Vig~dL 212 (570)
+..+|++|+.|.++||.+++.++..+ .|..........+. ....+.++|.++++++++||++. +.|..+|+
T Consensus 66 ~~~~D~~~~~~~~~g~~~~~~l~~~p-~~~~~~~~~~~~~~~~~~~p~~~~~w~~~v~~~~~~y~~~~~~~~~~~~~~ev 144 (346)
T d1uhva2 66 FTYIDRIFDSFLEIGIRPFVEIGFMP-KKLASGTQTVFYWEGNVTPPKDYEKWSDLVKAVLHHFISRYGIEEVLKWPFEI 144 (346)
T ss_dssp CHHHHHHHHHHHHHTCEECEEECCCC-TTTBSSCCEETTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHHHHTTCCEEE
T ss_pred hHhHHHHHHHHHHcCCCeEEEEeccC-ccccCCCCCcccccccCCChhhHHHHHHHHHHHHHHHHhhcCccccccccccc
Confidence 46789999999999999999998653 45432211111111 11235789999999999999863 45667999
Q ss_pred cCCCCCCC----CChhHHHHHHHHHHHHHHhcCCCcEEEEeCCCCCCcc------hhhhhcccCcCCCCCEEEEEeecCC
Q 008330 213 RNELRGPK----QNVKDWYRYMQLGAEAVHAANPEVLVILSGLNFDKDL------SFVRNQAVNLTFTGKLVFEAHWYGF 282 (570)
Q Consensus 213 ~NEP~~~~----~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl------~~~~~~p~~l~~~~nlVys~H~Y~~ 282 (570)
.|||.... .+.+++.+.++++.++||+++|+..|+..+......- ..+.... ..--++++|.|+.
T Consensus 145 wNEp~~~~~~~~~~~~~y~~~~~~~~~aik~~~P~~~v~~~~~~~~~~~~~~~~l~~~~~~~-----~~~D~i~~H~Y~~ 219 (346)
T d1uhva2 145 WNEPNLKEFWKDADEKEYFKLYKVTAKAIKEVNENLKVGGPAICGGADYWIEDFLNFCYEEN-----VPVDFVSRHAYTS 219 (346)
T ss_dssp SSCTTSTTTSGGGCHHHHHHHHHHHHHHHHHHCTTSCEEEEEECTTCTHHHHHHHHHHHHHT-----CCCSEEEEEEECB
T ss_pred ccCcccccCCCCCCHHHHHHHHHHHHHHHhccCCCceEeeccccCCccccHHHHHHHHHhcC-----CcccceeeecCCC
Confidence 99997653 2567888889999999999999998877665443321 1111111 1223689999975
Q ss_pred CCCC---CCCCCCCcchhhHHHHHHHHHHHHHHh---cCCCeEEeccccCCCCCCcc-----hHHHHHHHHHHHHHCCCc
Q 008330 283 TDGQ---AWVDGNPNQVCGRVVDNVMRLSGFLLE---QGWPLFVSEFGADLRGNNVN-----DNRYLNCFFGVAAELDWD 351 (570)
Q Consensus 283 ~~~~---~w~~~~~~~~~~~~~~~~~~~~g~l~~---~g~Pv~iGEFG~~~~~~~~~-----~~~~~~~~~~~~~~~gig 351 (570)
.... .+... .......+...+......+.+ .+.|++++|||......+.. ...|+...+..+...-.+
T Consensus 220 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~pi~~tE~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 298 (346)
T d1uhva2 220 KQGEYTPHLIYQ-EIMPSEYMLNEFKTVREIIKNSHFPNLPFHITEYNTSYSPQNPVHDTPFNAAYIARILSEGGDYVDS 298 (346)
T ss_dssp CCCCCCSSCCCC-CBCCHHHHHHHHHHHHHHHHTSSCTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHHHGGGTCSE
T ss_pred CCCcCCccchhh-hhhhhhhHHHHHHHHHHHHHhcCCCCccceeccccCCCCCCCCcccHHHHHHHHHHHHHHhcccccE
Confidence 4321 11111 111222333333332233333 57899999999876543321 223444444333344456
Q ss_pred eEEeccCceeecccCcc-CCCceeeeecCCCCCccchhHHHHHHhccc
Q 008330 352 WALWTLVGSYYLREGVI-GLNEYYGLFDWNWCDIRNSSFLERISSLQS 398 (570)
Q Consensus 352 w~~W~~~G~y~~r~~~~-~~~et~Gll~~dw~~~~~~~~~~~~~~l~~ 398 (570)
..+|.+...+.-..... .....+||++.|.. + .|.+ ..++++.+
T Consensus 299 ~~~~~~~d~~~~~~~~~~~~~~~~Gll~~dg~-p-KPay-~a~~~l~~ 343 (346)
T d1uhva2 299 FSYWTFSDVFEERDVPRSQFHGGFGLVALNMI-P-KPTF-YTFKFFNA 343 (346)
T ss_dssp EEESCSBSCCCTTSSCCSSCSCCSCSEETTTE-E-CHHH-HHHHHHTT
T ss_pred EEEEEeeccccccCCCCCcccCCccccCCCCC-C-CHHH-HHHHHHHh
Confidence 77887753321111111 12346899998753 2 2433 34555544
|
| >d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Arthrobacter sp. c2-2 [TaxId: 192168]
Probab=99.42 E-value=2.1e-12 Score=129.17 Aligned_cols=158 Identities=15% Similarity=0.037 Sum_probs=107.1
Q ss_pred eEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhh
Q 008330 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQK 118 (570)
Q Consensus 39 L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~ 118 (570)
++++|+.|. -+|++++|||||+..... ...........+.++..||++|||+||+.-...
T Consensus 1 i~v~g~~f~-LNGk~~~l~Gv~~h~~~p-~~G~a~~~~~~~~di~l~k~~G~N~iR~~h~p~------------------ 60 (297)
T d1yq2a5 1 VRIVGDQFL-VNGRRVVFHGVNRHETHP-DRGRVFDEAGAREDLALMKRFNVNAIRTSHYPP------------------ 60 (297)
T ss_dssp EEEETTEEE-ETTEECCEEEEEECCCCT-TTTTCCCHHHHHHHHHHHHHTTCCEEEETTSCC------------------
T ss_pred CEEECCEEE-ECCEEEEEeeeEcCCcCc-ccCcCCCHHHHHHHHHHHHHCCCCEEEccCCCC------------------
Confidence 478888875 589999999999854321 111112223367789999999999999832110
Q ss_pred ccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 008330 119 LGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMA 198 (570)
Q Consensus 119 lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA 198 (570)
=+++++.|.+.||+|+.++=.......... .......+. .-.+.+.+.++.|.
T Consensus 61 -------------------------~~~~~d~cD~~Gilv~~e~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~emV 113 (297)
T d1yq2a5 61 -------------------------HPRLLDLADEMGFWVILECDLETHGFEAGG-WVENPSDVP-AWRDALVDRMERTV 113 (297)
T ss_dssp -------------------------CHHHHHHHHHHTCEEEEECSCBCGGGTTTT-TTTCGGGCG-GGHHHHHHHHHHHH
T ss_pred -------------------------hHHHHHHHHhcCCEEEEeeccccccccccC-ccCCccccH-HHHHHHHHHHHHHH
Confidence 146889999999999998532110000000 000111122 22577888999999
Q ss_pred HHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCC
Q 008330 199 TIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGL 251 (570)
Q Consensus 199 ~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~ 251 (570)
.|++++|.|+.+.+.||+... . ..+++.+.+++.+|.+++...+.
T Consensus 114 ~r~~NHPSIi~W~~gNE~~~~----~----~~~~~~~~~k~~D~tRp~~~~~~ 158 (297)
T d1yq2a5 114 ERDKNHPSIVMWSLGNESGTG----S----NLAAMAAWAHARDSSRPVHYEGD 158 (297)
T ss_dssp HHHTTCTTEEEEECCSSCCCC----H----HHHHHHHHHHHHCTTSCEECTTC
T ss_pred HHhCCCCceEeecccccCCch----H----HHHHHHHHHHHhccCCcccccCc
Confidence 999999999999999998653 2 23456788999999999887654
|
| >d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Escherichia coli [TaxId: 562]
Probab=99.29 E-value=2e-11 Score=121.21 Aligned_cols=155 Identities=17% Similarity=0.068 Sum_probs=107.5
Q ss_pred eEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhh
Q 008330 39 LSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQK 118 (570)
Q Consensus 39 L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~ 118 (570)
++++|++|+ -+|++|+|||+||.... +......+....+++++.||++|||+||+--..+
T Consensus 2 v~i~~~~f~-lNGk~~~l~G~~~~~~~-~~~g~~~~~~~~~~di~l~k~~G~N~iR~~~~p~------------------ 61 (292)
T d1jz8a5 2 VRIENGLLL-LNGKPLLIRGVNRHEHH-PLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPN------------------ 61 (292)
T ss_dssp EEEETTEEE-ETTEECCEEEEECCCCB-TTTBTCCCHHHHHHHHHHHHHTTCCEEECTTSCC------------------
T ss_pred EEEECCEEE-ECCEEEEEeeeEccCCC-CccCCCCCHHHHHHHHHHHHhcCCCEEEecCCCC------------------
Confidence 567787765 39999999999986542 1111122333467789999999999999832110
Q ss_pred ccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 008330 119 LGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMA 198 (570)
Q Consensus 119 lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA 198 (570)
-+++.+.|.+.||+||.++=. |.......+....+. ...+.+.+.++.++
T Consensus 62 -------------------------~~~~~~~~D~~Gilv~~e~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v 111 (292)
T d1jz8a5 62 -------------------------HPLWYTLCDRYGLYVVDEANI----ETHGMVPMNRLTDDP-RWLPAMSERVTRMV 111 (292)
T ss_dssp -------------------------CHHHHHHHHHHTCEEEEECSC----BCTTSSSTTTTTTCG-GGHHHHHHHHHHHH
T ss_pred -------------------------hHHHHHHHhhcCCeEEeeeee----cccCCcccCCCCCCH-HHHHHHHHHHHHHH
Confidence 145789999999999999622 211111111111222 23678889999999
Q ss_pred HHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCC
Q 008330 199 TIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGL 251 (570)
Q Consensus 199 ~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~ 251 (570)
.|++++|.|+++.+.||+... ...++..+.|++.+|.+++.....
T Consensus 112 ~r~~nHPSvi~W~~~NE~~~~--------~~~~~~~~~~~~~d~~r~~~~~~~ 156 (292)
T d1jz8a5 112 QRDRNHPSVIIWSLGNESGHG--------ANHDALYRWIKSVDPSRPVQYEGG 156 (292)
T ss_dssp HHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECCTT
T ss_pred HHccCCCcHHHhcccccCCcc--------hhhHHHHHHHHHHhhcCccccccc
Confidence 999999999999999999653 223455678999999999887543
|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Probab=99.15 E-value=2.2e-10 Score=117.49 Aligned_cols=175 Identities=15% Similarity=0.046 Sum_probs=111.6
Q ss_pred CCeEecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhh
Q 008330 37 LPLSTNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSF 116 (570)
Q Consensus 37 ~~L~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~ 116 (570)
-.++.+++.|+ -+|+|++|+|++..-+. ++ ...-.++.++.||++|||+||+++.|..+++
T Consensus 4 ~~v~~d~~~~~-~~G~~~~~~~~~~h~~r---~~---~~~~w~~~l~~mk~~G~n~vr~~~~W~~~ep------------ 64 (354)
T d1tg7a5 4 KYVTWDEHSIF-VNGERLMIFSGEVHPYR---LP---VASLYIDIFEKVKALGFNCVSFYVDWALLEG------------ 64 (354)
T ss_dssp SSEEECSSCEE-ETTEEECEEEEECCGGG---SC---CGGGHHHHHHHHHTTTCCEEEEECCHHHHCS------------
T ss_pred ceEEEeCCEEE-ECCEEEEEEEEecCCCC---CC---CHHHHHHHHHHHHHcCCCEEEEecchhccCC------------
Confidence 46888998654 59999999999964221 11 1123678899999999999999998866544
Q ss_pred hhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCC-CCCccccCCCCCCCCCC------CCCC---
Q 008330 117 QKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHIS-KPGWCCSNSDGNGFFGD------QYFN--- 186 (570)
Q Consensus 117 ~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~-~~~w~~~~~dgng~~~d------~~~~--- 186 (570)
+|...+.+.++.|+++|+.|.++||+|||..... .+.|..+. -..|.. +..+
T Consensus 65 ---------------~~g~~df~~~~~l~~~l~~a~~~Gl~vil~~g~~~~~~w~~~~---~p~~~~~~~~~~r~~~~~~ 126 (354)
T d1tg7a5 65 ---------------NPGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGG---FPGWLQRVDGILRTSDEAY 126 (354)
T ss_dssp ---------------BTTBCCCCGGGCSHHHHHHHHHHTCEEEEECCSCCCTTBGGGG---CCGGGGGCSSCTTSSCHHH
T ss_pred ---------------CCCcccccchhhHHHHHHHHHHcCCEEEEcCCCCcCcccccCC---CCcccccCCCcccCCCHHH
Confidence 2233344566678999999999999999986532 12332111 011100 0011
Q ss_pred HHHHHHHHHHHHHH-----hCCCCcEEEEeccCCCCCCCC--ChhHHHHHHHHHHHHHHhcCCCcEEEE
Q 008330 187 PDLWIKGLTKMATI-----FNGVRNVVGMSLRNELRGPKQ--NVKDWYRYMQLGAEAVHAANPEVLVIL 248 (570)
Q Consensus 187 ~~~~~~~w~~iA~r-----yk~~p~Vig~dL~NEP~~~~~--~~~~W~~~~~~~~~aIr~~dp~~lIiV 248 (570)
.+...+.++.|+++ |++++.|+++.+-||...... ....-..+++.+.+..++.+...+++.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~n~~~ii~wqi~NE~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~ 195 (354)
T d1tg7a5 127 LKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFIS 195 (354)
T ss_dssp HHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBC
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCceEEEeccccCccccccccchHHHHHHHHHhhhhccCcccceEe
Confidence 23445555666655 688999999999999864321 111123455556666777777665443
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.13 E-value=2.3e-10 Score=115.14 Aligned_cols=155 Identities=14% Similarity=0.060 Sum_probs=101.3
Q ss_pred EecCCeEEcCCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhc
Q 008330 40 STNSRWIVDENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKL 119 (570)
Q Consensus 40 ~t~G~~IVd~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~l 119 (570)
++.|+.|+ -+|++|+|||+||.....+ -......++.++.||++|+|+||+ ++...
T Consensus 8 ~~~g~~f~-vNG~~~~~rG~~~~p~~~~----~~~~~~~~~~l~~~k~~G~N~iR~---~~~~~---------------- 63 (339)
T d2vzsa5 8 SSGGRQYS-VNGKPLLIRGGGYTPDLFL----RWNETAAADKLKYVLNLGLNTVRL---EGHIE---------------- 63 (339)
T ss_dssp TTSCEEEE-ETTEEECEEEEECCCCTTC----CCCHHHHHHHHHHHHHTTCCEEEE---ESCCC----------------
T ss_pred cCCCcEEE-ECCEEEEEeccccCCCcCC----CCCHHHHHHHHHHHHHcCCCEEEe---cCCCC----------------
Confidence 34456553 5999999999998521100 011223678899999999999997 21110
Q ss_pred cchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCC-CCCCCCCCHHHHHHHHHHHH
Q 008330 120 GLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNG-FFGDQYFNPDLWIKGLTKMA 198 (570)
Q Consensus 120 g~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng-~~~d~~~~~~~~~~~w~~iA 198 (570)
=++++++|.+.||+|+.++... +.|......... -..++ ...+.+.+.++.++
T Consensus 64 ------------------------~~~f~d~~D~~Gi~V~~e~~~~-~~w~~~~~~~~~~~~~~p-~~~~~~~~~~~~~v 117 (339)
T d2vzsa5 64 ------------------------PDEFFDIADDLGVLTMPGWECC-DKWEGQVNGEEKGEPWVE-SDYPIAKASMFSEA 117 (339)
T ss_dssp ------------------------CHHHHHHHHHHTCEEEEECCSS-SGGGTTTSTTSSSCCCCT-THHHHHHHHHHHHH
T ss_pred ------------------------CHHHHHHHHHCCCeEecccccC-ccccccCCcccccCCCCH-HHHHHHHHHHHHHH
Confidence 0347778889999999986542 234221110000 00011 12467788899999
Q ss_pred HHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHHHHHHHHhcCCCcEEEEeCC
Q 008330 199 TIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQLGAEAVHAANPEVLVILSGL 251 (570)
Q Consensus 199 ~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~ 251 (570)
+|++++|.|+++.+.||+... .++. ....+.+++.||.++++....
T Consensus 118 ~r~rnHPsvi~W~~gNE~~~~----~~~~---~~~~~~~~~~D~~r~~~~~s~ 163 (339)
T d2vzsa5 118 ERLRDHPSVISFHIGSDFAPD----RRIE---QGYLDAMKAADFLLPVIPAAS 163 (339)
T ss_dssp HHHTTCTTBCCEESCSSSCCC----HHHH---HHHHHHHHHTTCCSCEESCSS
T ss_pred HHhcCCCcEEEEecCcCCCch----HHHH---HHHHHHHHHhCCCceeEecCC
Confidence 999999999999999998653 3333 344577899999988776543
|
| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Thermotoga maritima [TaxId: 2336]
Probab=99.07 E-value=3e-10 Score=114.78 Aligned_cols=233 Identities=15% Similarity=0.213 Sum_probs=136.8
Q ss_pred HHHHHHHHHHHhcCCCEEE---EecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 141 IKAFQAVVASLGNNNVMVI---LDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VI---LD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
++.+|++|++|.++||.|+ |-.|...|.|..... .+.....+.+.++.+.+++||++. |..+|+.|||.
T Consensus 62 ~~~~D~~v~~a~~~gi~v~gh~l~W~~~~p~~~~~~~------~~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NEp~ 133 (324)
T d1vbua1 62 FTPAEKHVEFAEENDMIVHGHTLVWHNQLPGWITGRE------WTKEELLNVLEDHIKTVVSHFKGR--VKIWDVVNEAV 133 (324)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSSSCCHHHHTSC------CCHHHHHHHHHHHHHHHHHHTTTT--CCEEEEEESCB
T ss_pred hHHHHHHHHHHHHCCCEEEEecCcccccCCccccccc------cchHHHHHHHHHHHHHHHHhcCCC--ceEEEEecccc
Confidence 5678999999999999985 333444444432110 001112356677888999999986 56799999995
Q ss_pred CCCC--ChhHHH-----HHHHHHHHHHHhcCCCcEEEEeCCCCCCcch-------hhhhc-ccCcCCCCCEEEEEeecCC
Q 008330 218 GPKQ--NVKDWY-----RYMQLGAEAVHAANPEVLVILSGLNFDKDLS-------FVRNQ-AVNLTFTGKLVFEAHWYGF 282 (570)
Q Consensus 218 ~~~~--~~~~W~-----~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~-------~~~~~-p~~l~~~~nlVys~H~Y~~ 282 (570)
.... ....|+ .+++.+.+++|+++|+..+++.+.+....-. .+... ....+ -+.+-+..|.+..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~a~~~ar~~dP~a~l~~n~~~~~~~~~~~~~~~~~v~~l~~~~~~-id~iG~q~h~~~~ 212 (324)
T d1vbua1 134 SDSGTYRESVWYKTIGPEYIEKAFRWAKEADPDAILIYNDYSIEEINAKSNFVYNMIKELKEKGVP-VDGIGFQMHIDYR 212 (324)
T ss_dssp CTTSSBCCCHHHHHHCTHHHHHHHHHHHHHCTTSEEEEEESSCSSSSHHHHHHHHHHHHHHHTTCC-CCEEEECCEEETT
T ss_pred cCCCCccCChHHHHhHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCcHhHHHHHHHHHHHHhCCCC-cceeEeeeccCcC
Confidence 4321 112343 4578889999999999999998765322111 11100 00112 2456666676543
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC------cchHHHHHHHHHHHHHCC-C-ceEE
Q 008330 283 TDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN------VNDNRYLNCFFGVAAELD-W-DWAL 354 (570)
Q Consensus 283 ~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~------~~~~~~~~~~~~~~~~~g-i-gw~~ 354 (570)
.. ..+.+.+.+++ +.+.|+||+|+|||....... .....|+..++..+.++. + +-++
T Consensus 213 ~~-----------~~~~~~~~l~~----~~~~g~pi~iTE~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~~p~v~gi~~ 277 (324)
T d1vbua1 213 GL-----------NYDSFRRNLER----FAKLGLQIYITEMDVRIPLSGSEEYYLKKQAEVCAKIFDICLDNPAVKAIQF 277 (324)
T ss_dssp CC-----------CHHHHHHHHHH----HHTTTCEEEEEEEEEEEESSSCHHHHHHHHHHHHHHHHHHHHTSTTEEEEEE
T ss_pred CC-----------CHHHHHHHHHH----HHhcCCceeeeeceeccCCCCCChHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 21 23444444443 344789999999998654322 124577777777777663 3 4568
Q ss_pred eccCceeecccCccCCCceeeeecCCCCCccchhHHHHHHhcccc
Q 008330 355 WTLVGSYYLREGVIGLNEYYGLFDWNWCDIRNSSFLERISSLQSP 399 (570)
Q Consensus 355 W~~~G~y~~r~~~~~~~et~Gll~~dw~~~~~~~~~~~~~~l~~~ 399 (570)
|.+...|....+.....+..||++.|++ ++ |.+..-.++|+++
T Consensus 278 W~~~D~~~w~~~~~~~~~~~gL~d~d~~-pK-PAy~av~~~l~~~ 320 (324)
T d1vbua1 278 WGFTDKYSWVPGFFKGYGKALLFDENYN-PK-PCYYAIKEVLEKK 320 (324)
T ss_dssp SCSBTTSCSHHHHSTTEECCSSBCTTSC-BC-HHHHHHHHHHHHH
T ss_pred eccccCCccCCCCCCCCCCCccCCCCCC-CC-HHHHHHHHHHHHH
Confidence 8776333222222233455789999974 33 3343333444443
|
| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces halstedii [TaxId: 1944]
Probab=99.03 E-value=6.8e-10 Score=111.17 Aligned_cols=208 Identities=14% Similarity=0.207 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHhcCCCEEE---EecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 141 IKAFQAVVASLGNNNVMVI---LDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VI---LD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
++.+|++|++|.++||.|. |=.|...|.|... +. .....+.+.++.+.+++||++. |..+|+.|||.
T Consensus 60 ~~~~D~~v~~a~~~gi~v~gh~l~w~~~~p~w~~~-------~~-~~~~~~~~~~~i~~v~~ry~g~--i~~WdV~NEp~ 129 (302)
T d1nq6a_ 60 FSAADRIVSHAQSKGMKVRGHTLVWHSQLPGWVSP-------LA-ATDLRSAMNNHITQVMTHYKGK--IHSWDVVNEAF 129 (302)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEEEESTTCCTTTTT-------SC-HHHHHHHHHHHHHHHHHHTTTS--CSEEEEEECCB
T ss_pred cHHHHHHHHHHHHCCCEEEeecccccccccccccc-------cc-hHHHHHHHHHHHHHHHHHcCCC--cceEEEecccc
Confidence 5679999999999999985 4455544554211 11 1122456778889999999997 77899999994
Q ss_pred CCCC----ChhHHH-----HHHHHHHHHHHhcCCCcEEEEeCCCCCCc----------chhhhhcccCcCCCCCEEEEEe
Q 008330 218 GPKQ----NVKDWY-----RYMQLGAEAVHAANPEVLVILSGLNFDKD----------LSFVRNQAVNLTFTGKLVFEAH 278 (570)
Q Consensus 218 ~~~~----~~~~W~-----~~~~~~~~aIr~~dp~~lIiVeG~~w~~d----------l~~~~~~p~~l~~~~nlVys~H 278 (570)
.... ....|+ .+++.+.+++|+++|+..+++.+.+.... +..+....+ + -+-+-+..|
T Consensus 130 ~~~~~~~~~~~~~~~~~g~~~~~~a~~~ar~~dP~a~l~~nd~~~~~~~~~~~~~~~~i~~l~~~~~--~-id~iG~q~H 206 (302)
T d1nq6a_ 130 QDGGSGARRSSPFQDKLGNGFIEEAFRTARTVDADAKLCYNDYNTDGQNAKSNAVYEMVKDFKQRGV--P-IDCVGFQSH 206 (302)
T ss_dssp CSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEESSCSSSSHHHHHHHHHHHHHHHHTC--C-CCEEEECCE
T ss_pred ccCCCCccCCChhhhhccHHHHHHHHHHHHHhCCCCceeecccccccCchhhHHHHHHHHHHHhccC--C-cceeEEEec
Confidence 3311 122343 35788999999999999999987653221 011111111 2 256777888
Q ss_pred ecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHCC-C-ceEEec
Q 008330 279 WYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAELD-W-DWALWT 356 (570)
Q Consensus 279 ~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~g-i-gw~~W~ 356 (570)
+|..... .+.+.+.+++ +.+.|.||+|+|++....+ .....+++.++..+.++. + +-++|.
T Consensus 207 ~~~~~~~-----------~~~~~~~l~~----~~~~g~pi~iTE~d~~~~~--~~Qa~~~~~~~~~~~~~p~v~~i~~W~ 269 (302)
T d1nq6a_ 207 FNSNSPV-----------PSDFQANLQR----FADLGVDVQITELDIEGSG--SAQAANYTKVVNACLAVTRCTGITVWG 269 (302)
T ss_dssp EBTTBCC-----------CTTHHHHHHH----HHTTTCEEEEEEEEECCCH--HHHHHHHHHHHHHHHTSTTEEEEEESC
T ss_pred cCCCCCC-----------hHHHHHHHHH----HHhcCCceEEecCCCCCCc--HHHHHHHHHHHHHHHccCCceEEEEeC
Confidence 7753211 1223344433 3457999999999986542 335677888888877765 3 566887
Q ss_pred cCceeecccCccCCCceeeeecCCCCC
Q 008330 357 LVGSYYLREGVIGLNEYYGLFDWNWCD 383 (570)
Q Consensus 357 ~~G~y~~r~~~~~~~et~Gll~~dw~~ 383 (570)
+...|..+. +...||++.|++.
T Consensus 270 ~~D~~sw~~-----~~~~~L~d~d~~p 291 (302)
T d1nq6a_ 270 VTDKYSWRS-----GGTPLLFDGDYNK 291 (302)
T ss_dssp SCGGGCTTG-----GGCCSSBCTTSCB
T ss_pred CccCCCcCC-----CCCCeeECCCCCC
Confidence 763332222 3456889988754
|
| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermus thermophilus [TaxId: 274]
Probab=99.01 E-value=9.1e-09 Score=107.83 Aligned_cols=263 Identities=14% Similarity=0.106 Sum_probs=157.0
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|+.|+.++|.-+.++. +.-.+...++.++++|+++.++||.
T Consensus 56 y~eDi~ll~~lG~~~yRfsi~WsRI~P~g--------------------------~g~~n~~gl~~Y~~~i~~l~~~GI~ 109 (426)
T d1ug6a_ 56 YEEDIALMQSLGVRAYRFSVAWPRILPEG--------------------------RGRINPKGLAFYDRLVDRLLASGIT 109 (426)
T ss_dssp HHHHHHHHHHHTCCEEEEECCHHHHSTTS--------------------------SSCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHcCCCEEEccCCHHHcccCC--------------------------CCCcChHHHHHHHHHHHHHHHcCCe
Confidence 68999999999999999999997665420 1223567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCC------------C-CCCh
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG------------P-KQNV 223 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~------------~-~~~~ 223 (570)
.||.+|+.. |.|... ..||-+. ...+.|.++-+.++++|++.-. -+=.+|||.. + ..+.
T Consensus 110 P~VTL~Hfd~P~~l~~---~gGw~~~--~~~~~F~~Ya~~v~~~fgd~V~--~w~TiNEP~~~~~~gy~~G~~ppg~~~~ 182 (426)
T d1ug6a_ 110 PFLTLYHWDLPLALEE---RGGWRSR--ETAFAFAEYAEAVARALADRVP--FFATLNEPWCSAFLGHWTGEHAPGLRNL 182 (426)
T ss_dssp EEEEEESSCCBHHHHT---TTGGGSH--HHHHHHHHHHHHHHHHHTTTCC--EEEEEECHHHHHHHHHTSCSSTTCCCCH
T ss_pred EEEEecccccchhhhc---cCccCCH--HHHHHHHHHHHHHHHHhCcccc--eEEEecCCeeEeeeccccCccccCCcch
Confidence 999998754 555321 1243332 2367899999999999999744 3567899942 1 1122
Q ss_pred hHHH-------HHHHHHHHHHHhcCCCcEEEEeCCCC--CCcch---------------hh--hhccc-------CcCC-
Q 008330 224 KDWY-------RYMQLGAEAVHAANPEVLVILSGLNF--DKDLS---------------FV--RNQAV-------NLTF- 269 (570)
Q Consensus 224 ~~W~-------~~~~~~~~aIr~~dp~~lIiVeG~~w--~~dl~---------------~~--~~~p~-------~l~~- 269 (570)
...+ .....+++++|+..+..+.++-...+ ..+.. .+ ...|- .++.
T Consensus 183 ~~~~~~~~~~~~Aha~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~f~d~i~~g~yp~~~~~~~~~~~~~ 262 (426)
T d1ug6a_ 183 EAALRAAHHLLLGHGLAVEALRAAGARRVGIVLNFAPAYGEDPEAVDVADRYHNRFFLDPILGKGYPESPFRDPPPVPIL 262 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCEECSCHHHHHHHHHHHTHHHHHHHTTSCSCSCCSSSCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCceeEEeccCCCCccchHHHHHHHHHhhhhcchHhhCCcchhHHhhcccCCCcc
Confidence 2222 22346778889888876655432221 11100 00 00010 0000
Q ss_pred --------CCCEEEEEeecCCCCCC-------------CCCCC--CCcchhhHHHHHHHHHHHHHHh-cCCCeEEecccc
Q 008330 270 --------TGKLVFEAHWYGFTDGQ-------------AWVDG--NPNQVCGRVVDNVMRLSGFLLE-QGWPLFVSEFGA 325 (570)
Q Consensus 270 --------~~nlVys~H~Y~~~~~~-------------~w~~~--~~~~~~~~~~~~~~~~~g~l~~-~g~Pv~iGEFG~ 325 (570)
..--.+.+.+|...... .+... ...-.+..+...+. ++.+ .+.||+|+|.|+
T Consensus 263 ~~d~~~ik~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~t~~gw~i~P~gl~~~l~----~~~~~y~~Pi~ITENG~ 338 (426)
T d1ug6a_ 263 SRDLELVARPLDFLGVNYYAPVRVAPGTGTLPVRYLPPEGPATAMGWEVYPEGLYHLLK----RLGREVPWPLYVTENGA 338 (426)
T ss_dssp TTHHHHHTCCCSEEEEEESCCEEEEECCSSSCEEECCCSSCBCTTCCBCCHHHHHHHHH----HHHHHCSSCEEEEEECC
T ss_pred hhHHHHhcCCcCccceeeEEeEEEecCCcccccccccCCCCccCCCCeECccHhHHHHH----HHHHhcCCcEEEeecCC
Confidence 12245677777632110 00000 00012333333333 2322 678999999998
Q ss_pred CCCCC--------CcchHHHHHHHHHHHHH---CCC---ceEEeccCceeecccCccCCCceeeeecCC
Q 008330 326 DLRGN--------NVNDNRYLNCFFGVAAE---LDW---DWALWTLVGSYYLREGVIGLNEYYGLFDWN 380 (570)
Q Consensus 326 ~~~~~--------~~~~~~~~~~~~~~~~~---~gi---gw~~W~~~G~y~~r~~~~~~~et~Gll~~d 380 (570)
...+. +..+..|++..+..+.+ .|+ |+++|++-..|-... +....|||+.=|
T Consensus 339 ~~~~~~~~~~~i~D~~Ri~yl~~~l~~~~~Ai~dGv~V~GY~~WSl~Dn~EW~~---Gy~~rfGL~~VD 404 (426)
T d1ug6a_ 339 AYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNFEWAF---GYTRRFGLYYVD 404 (426)
T ss_dssp CCCCCCSSCSSBCCHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCCCCGGG---GGGSCCCSEEEE
T ss_pred ccCCCCCCccccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcchhcChhh---cccCcCceEEEc
Confidence 76531 23456777776665443 354 799999976664432 346779987433
|
| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Clostridium thermocellum, XynZ [TaxId: 1515]
Probab=98.95 E-value=1.8e-09 Score=108.32 Aligned_cols=221 Identities=12% Similarity=0.161 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHhcCCCEEEE---ecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 141 IKAFQAVVASLGNNNVMVIL---DNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VIL---D~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
++.+|++|++|.++||.|.. =.|...|.|.... .+ +.....+.+.++.+.+++||++. |..+|+.|||.
T Consensus 61 ~~~~D~~v~~a~~~gi~v~gh~l~w~~~~p~w~~~~----~~--~~~~~~~~~~~~i~~v~~ry~g~--i~~WeV~NEp~ 132 (320)
T d1xyza_ 61 FSKGDQLLAFAERNGMQMRGHTLIWHNQNPSWLTNG----NW--NRDSLLAVMKNHITTVMTHYKGK--IVEWDVANECM 132 (320)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSSSCCHHHHTS----CC--CHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEESCB
T ss_pred hHHHHHHHHHHHHCCCEEEeeccccCCCCCcchhcc----cc--chHHHHHHHHHHHHHHHHHcCCC--ceeEEeecccc
Confidence 56789999999999999852 2344444443211 00 00112456778889999999987 77899999996
Q ss_pred CCCC---ChhHHH-----HHHHHHHHHHHhcCCCcEEEEeCCCCCCcch----h---hhhc-ccCcCCCCCEEEEEeecC
Q 008330 218 GPKQ---NVKDWY-----RYMQLGAEAVHAANPEVLVILSGLNFDKDLS----F---VRNQ-AVNLTFTGKLVFEAHWYG 281 (570)
Q Consensus 218 ~~~~---~~~~W~-----~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl~----~---~~~~-p~~l~~~~nlVys~H~Y~ 281 (570)
.... ....|. .++.++.+++|+++|+..+++.+.+....-. + +... .-..++ ..+.+|.|.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~dp~a~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~i---d~iG~q~h~ 209 (320)
T d1xyza_ 133 DDSGNGLRSSIWRNVIGQDYLDYAFRYAREADPDALLFYNDYNIEDLGPKSNAVFNMIKSMKERGVPI---DGVGFQCHF 209 (320)
T ss_dssp CTTSSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEESSCSSSSHHHHHHHHHHHHHHHTTCCC---CEEEECCEE
T ss_pred cCCCccccCcHHhhhccHHHHHHHHHHHHHhccCcEEEeeccccccccHHHHHHHHHHHHHHhCcCcc---ceEEecccc
Confidence 5321 122333 4578899999999999999988764322111 0 1000 001112 234445443
Q ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC------cchHHHHHHHHHHHHHCC-C-ceE
Q 008330 282 FTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN------VNDNRYLNCFFGVAAELD-W-DWA 353 (570)
Q Consensus 282 ~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~------~~~~~~~~~~~~~~~~~g-i-gw~ 353 (570)
.... .....+.+...+++ +.+.++||+|+|+|....... ....+|+..++..+.++. + +-+
T Consensus 210 ~~~~-------~~~~~~~~~~~l~~----~~~~g~pI~iTE~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~~p~v~gi~ 278 (320)
T d1xyza_ 210 INGM-------SPEYLASIDQNIKR----YAEIGVIVSFTEIDIRIPQSENPATAFQVQANNYKELMKICLANPNCNTFV 278 (320)
T ss_dssp ESSC-------CHHHHHHHHHHHHH----HHHTTCEEEEEEEEEEEETTSCHHHHHHHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred cCCC-------CchHHHHHHHHHHH----HHhcCCceeeeccccccCCCCCchhHHHHHHHHHHHHHHHHHhCCCeeEEE
Confidence 2111 01112233333332 344789999999998543321 123578888888888874 3 677
Q ss_pred EeccCceeecccCccCCCceeeeecCCCCC
Q 008330 354 LWTLVGSYYLREGVIGLNEYYGLFDWNWCD 383 (570)
Q Consensus 354 ~W~~~G~y~~r~~~~~~~et~Gll~~dw~~ 383 (570)
+|.+...|..+.+.......+||++.|++.
T Consensus 279 ~W~~~D~~~w~~~~~~~~~~~gl~d~d~~p 308 (320)
T d1xyza_ 279 MWGFTDKYTWIPGTFPGYGNPLIYDSNYNP 308 (320)
T ss_dssp ESCSBTTSCSHHHHSTTEECCSSBCTTSCB
T ss_pred EeecccCCcccCCCCCCCCCCccCCCCCCC
Confidence 888864433222223334567999998753
|
| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Cellulomonas fimi [TaxId: 1708]
Probab=98.94 E-value=1.2e-09 Score=109.79 Aligned_cols=215 Identities=14% Similarity=0.173 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHhcCCCEEEE---ecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 141 IKAFQAVVASLGNNNVMVIL---DNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VIL---D~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
++.+|++|++|.++||.|+- -.|...|.|... + +.....+.+.++.+.+++||++. |..+|+.|||.
T Consensus 60 ~~~~D~~v~~a~~~gl~v~gh~lvw~~~~p~~~~~-------~-~~~~~~~~~~~~i~~v~~ry~g~--i~~WdV~NEp~ 129 (312)
T d1fh9a_ 60 FGAGDRVASYAADTGKELYGHTLVWHSQLPDWAKN-------L-NGSAFESAMVNHVTKVADHFEGK--VASWDVVNEAF 129 (312)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEEEESSSCCHHHHT-------C-CHHHHHHHHHHHHHHHHHHTTTT--CCEEEEEECCB
T ss_pred cHHHHHHHHHHHHCCCEEEEecccccccccccccc-------c-chHHHHHHHHHHHHHHHHhcCCC--ceEEEEecccc
Confidence 57899999999999999853 334333333110 0 00011345667889999999986 78899999996
Q ss_pred CCCC---ChhHHH-----HHHHHHHHHHHhcCCCcEEEEeCCCCCCc----------chhhhhcccCcCCCCCEEEEEee
Q 008330 218 GPKQ---NVKDWY-----RYMQLGAEAVHAANPEVLVILSGLNFDKD----------LSFVRNQAVNLTFTGKLVFEAHW 279 (570)
Q Consensus 218 ~~~~---~~~~W~-----~~~~~~~~aIr~~dp~~lIiVeG~~w~~d----------l~~~~~~p~~l~~~~nlVys~H~ 279 (570)
.... ....|+ .+++.+.+++|+++|+..+++.+.+.... +..+.... .+ -+-+-+..|.
T Consensus 130 ~~~~~~~~~~~~~~~lg~~~i~~a~~~ar~~dP~a~l~~n~~~~~~~~~~~~~~~~~i~~l~~~g--~~-id~ig~q~H~ 206 (312)
T d1fh9a_ 130 ADGGGRRQDSAFQQKLGNGYIETAFRAARAADPTAKLCINDYNVEGINAKSNSLYDLVKDFKARG--VP-LDCVGFQSHL 206 (312)
T ss_dssp CTTSSBCSSCHHHHHHCTTHHHHHHHHHHHHCSSSEEEEEESSCSSSSHHHHHHHHHHHHHHHHT--CC-CCEEEECCEE
T ss_pred cCCCCCcCCchHHHhhhHHHHHHHHHHHHhhCCCceEEeecCcccccchhHHHHHHHHHHHHhCC--CC-ccceeEeecc
Confidence 4321 122343 35788999999999999999976543211 01111111 12 2567788888
Q ss_pred cCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCc-----chHHHHHHHHHHHHHCC-C-ce
Q 008330 280 YGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNV-----NDNRYLNCFFGVAAELD-W-DW 352 (570)
Q Consensus 280 Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~-----~~~~~~~~~~~~~~~~g-i-gw 352 (570)
+..... ..+.+.+++ +.+.++||+|+|||+....... ....+++.++..+.++. + +.
T Consensus 207 ~~~~~~------------~~~~~~l~~----~~~~g~pi~iTE~d~~~~~~~~~~~~~~QA~~~~~~~~~~~~~~~v~~v 270 (312)
T d1fh9a_ 207 IVGQVP------------GDFRQNLQR----FADLGVDVRITELDIRMRTPSDATKLATQAADYKKVVQACMQVTRCQGV 270 (312)
T ss_dssp ETTCCC------------TTHHHHHHH----HHTTTCEEEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTSTTEEEE
T ss_pred cccCcH------------HHHHHHHHH----HHhcCCceEEeccccccCCCCChhHHHHHHHHHHHHHHHHHhcCCccEE
Confidence 764321 123344433 3347899999999986543221 13577788888877775 3 57
Q ss_pred EEeccCceeecccCccCCCceeeeecCCCCCc
Q 008330 353 ALWTLVGSYYLREGVIGLNEYYGLFDWNWCDI 384 (570)
Q Consensus 353 ~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~~ 384 (570)
++|.+...+-.+.+.......+||++.|++..
T Consensus 271 ~~W~~~D~~~W~~~~~~~~~~~~l~d~d~~pK 302 (312)
T d1fh9a_ 271 TVWGITDKYSWVPDVFPGEGAALVWDASYAKK 302 (312)
T ss_dssp EESCSBTTTCSHHHHSTTEECCSSBCTTSCBC
T ss_pred EEeCCccCCcccCCCCCCCCCCccCCCCCCCC
Confidence 78887533222111111133477888886543
|
| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Ixt6 [TaxId: 1422]
Probab=98.89 E-value=1.4e-08 Score=102.49 Aligned_cols=221 Identities=14% Similarity=0.222 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHhcCCCEEE---EecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 141 IKAFQAVVASLGNNNVMVI---LDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VI---LD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
++.+|++|++|.++||.|. |=.|...|.|......++. + +.....+.+.++.+.+++||++. |-.+|+.|||.
T Consensus 60 ~~~~D~~v~~a~~~gi~v~gh~lvw~~~~P~W~~~~~~~~~-~-~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NEp~ 135 (330)
T d1n82a_ 60 FQEADRIVDFACSHRMAVRGHTLVWHNQTPDWVFQDGQGHF-V-SRDVLLERMKCHISTVVRRYKGK--IYCWDVINEAV 135 (330)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEESSSCCGGGGBCSSSSB-C-CHHHHHHHHHHHHHHHHHHHTTT--CCEEEEEESCB
T ss_pred hHHHHHHHHHHHHCCCEEEEeecccCCCCCchhccCCcCCc-C-CHHHHHHHHHHHHHHHHHhcCCC--ceeEEEecccc
Confidence 4678999999999999984 3457667888643222111 0 00001245667888899999987 67899999995
Q ss_pred CCCC----ChhHHH-----HHHHHHHHHHHhcCCCcEEEEeCCCCCCc------chh---hhhcccCcCCCCCEEEEEee
Q 008330 218 GPKQ----NVKDWY-----RYMQLGAEAVHAANPEVLVILSGLNFDKD------LSF---VRNQAVNLTFTGKLVFEAHW 279 (570)
Q Consensus 218 ~~~~----~~~~W~-----~~~~~~~~aIr~~dp~~lIiVeG~~w~~d------l~~---~~~~p~~l~~~~nlVys~H~ 279 (570)
.... ....|+ .+++++.+++|+++|+..+++.+.+.... +.. +.... .++ +-+-+..|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~af~~ar~~~P~a~l~~n~~~~~~~~~~~~~~~~v~~l~~~g--~~i-dgiG~q~h~ 212 (330)
T d1n82a_ 136 ADEGDELLRPSKWRQIIGDDFMEQAFLYAYEADPDALLFYNDYNECFPEKREKIFALVKSLRDKG--IPI-HGIGMQAHW 212 (330)
T ss_dssp CSSSSCSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEESSTTSHHHHHHHHHHHHHHHHTT--CCC-CEEEECCEE
T ss_pred ccCccccccCChhhhccChHHHHHHHHHHHHhCCcceEeecccccccccchhhHHHHHHHHHhCC--CCc-ceEEEeecC
Confidence 4311 122344 45688889999999999999987643221 111 11111 112 233344444
Q ss_pred cCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC--------------cchHHHHHHHHHHH
Q 008330 280 YGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN--------------VNDNRYLNCFFGVA 345 (570)
Q Consensus 280 Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~--------------~~~~~~~~~~~~~~ 345 (570)
+... + ....+.+.+++ +.+.|.||.++|+++...... .....|+..++..+
T Consensus 213 ~~~~---------~--~~~~i~~~l~~----~~~~g~~i~iTE~d~~~~~~~~~~~~~~~~~~~~~~~QA~~~~~~~~~~ 277 (330)
T d1n82a_ 213 SLTR---------P--SLDEIRAAIER----YASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALF 277 (330)
T ss_dssp ESSS---------S--CHHHHHHHHHH----HHTTTCEEEEEEEEEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCc---------C--CHHHHHHHHHH----HHhcCCceeeccccccccCcccccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3211 1 12344444433 345789999999998543211 12356777777777
Q ss_pred HHC--CC-ceEEeccCceeecccCcc--CCCceeeeecCCCCC
Q 008330 346 AEL--DW-DWALWTLVGSYYLREGVI--GLNEYYGLFDWNWCD 383 (570)
Q Consensus 346 ~~~--gi-gw~~W~~~G~y~~r~~~~--~~~et~Gll~~dw~~ 383 (570)
.+. ++ +-++|.+...|-.+.+.+ +..+.+||++.|++.
T Consensus 278 ~~~~p~v~gi~~Wg~~D~~sW~~~~~~~~~~~~~~L~d~d~~p 320 (330)
T d1n82a_ 278 KEYRDVIQSVTFWGIADDHTWLDNFPVHGRKNWPLLFDEQHKP 320 (330)
T ss_dssp HHTTTTEEEEEESCSBTTSCGGGTSSSTTCCCCCSSBCTTSCB
T ss_pred HHcCCCeeEEEEecCccCCccCCCCCCCCCcCCCCCCCCCCCC
Confidence 764 34 667888764443333222 334566788887643
|
| >d2zqna1 b.42.2.1 (A:131-260) 29-kDa galactose-binding lectin {Lumbricus terrestris [TaxId: 6398]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: 29-kDa galactose-binding lectin species: Lumbricus terrestris [TaxId: 6398]
Probab=98.85 E-value=2.9e-09 Score=93.19 Aligned_cols=102 Identities=12% Similarity=0.047 Sum_probs=80.3
Q ss_pred CccceeeCCCCceeeeecCC----CCceecCCCCC-----CCCccccCCcceeecccceEEeeccCCccceeccccC-CC
Q 008330 409 GLHKVIYHPATGLCVQRKSF----LDPLTLGPCTE-----SEAWSYTPHKTISLKGAYFCLQAKHVGKPAKLGIICT-DC 478 (570)
Q Consensus 409 ~~~~~~~~~~tg~c~~~~~~----~~~~~~~~c~~-----~~~W~~~~~~~~~~~~~~~cl~a~~~g~~~~~~~~c~-~~ 478 (570)
|.++.|....||+|+++.+. .++|.+++|.. +++|.+++.+.|+.+.+++||++. |..+.+ ..|. +.
T Consensus 1 p~~y~I~~~~sg~~LDv~g~~~~~Ga~v~~w~~~~~~g~~nQ~W~~~~~g~i~~~~~~~~ld~~--G~~v~~-~~c~~~~ 77 (130)
T d2zqna1 1 PKFFYIKSELNGKVLDIEGQNPAPGSKIITWDQKKGPTAVNQLWYTDQQGVIRSKLNDFAIDAS--HEQIET-QPFDPNN 77 (130)
T ss_dssp CCCEEEEETTTSCEEEEGGGCCSTTCBEEEECCCCSGGGGGGCEEECTTSCEEETTTCCEEECS--SSSCEE-ECCCTTC
T ss_pred CcEEEEEECCCCCEEEeCCCCCCCCceEEEEEecCCCCCcceEEEEeccCCEEEcccccccccc--CcceEE-eccCCCc
Confidence 45789999999999998542 36699998754 379999999999988999999985 456666 7787 77
Q ss_pred CCceeEeeccccEEEEecCCCceEEEeecC----CC-ceeecce
Q 008330 479 GSTWEIISDSKMHLSSKADNGTTVCLDVDS----SN-TIVTNTC 517 (570)
Q Consensus 479 ~~~W~~~s~~~~~~~~~~~~~~~~cld~~~----~~-~~~~~~c 517 (570)
.|+|.+.+++.++ ....+.+|||+.+ +| +|+.+.|
T Consensus 78 ~qqW~~~~~g~~~----~~~~~~~~LDv~~~~~~~G~~v~~~~~ 117 (130)
T d2zqna1 78 PKRAWIVSGNTIA----QLSDRDIVLDIIKSDKEAGAHICAWKQ 117 (130)
T ss_dssp GGGCEEEETTEEE----ETTEEEEEEEEGGGCCSTTCBEEEEEC
T ss_pred ccEEEEcCCCeEE----EeccCCeEEECCCCCCCCCCEEEEEcC
Confidence 8999999887643 2335899999962 55 6777876
|
| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus polymyxa [TaxId: 1406]
Probab=98.84 E-value=1.1e-07 Score=100.02 Aligned_cols=138 Identities=12% Similarity=0.047 Sum_probs=100.0
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|+.|+.++|.-+.++. ....+...++.++++|+.+.++||.
T Consensus 60 y~eDi~l~~~lG~~~yRfSi~WsRI~P~g--------------------------~g~~n~~gl~~Y~~~i~~l~~~gI~ 113 (447)
T d1e4ia_ 60 YEEDIRLMKELGIRTYRFSVSWPRIFPNG--------------------------DGEVNQKGLDYYHRVVDLLNDNGIE 113 (447)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSTTS--------------------------SSCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHhCCCEEEccCCHHHcccCC--------------------------CCCcCHHHHHHHHHHHHHHHHhCCe
Confidence 68999999999999999999997765420 0223567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCC------------C-CCh
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP------------K-QNV 223 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~------------~-~~~ 223 (570)
.||.+|+.. |.|... ..||.+.. ..+.|.++-+.++++|++. |--+=.+|||... . .+.
T Consensus 114 P~VTL~H~dlP~~l~~---~gGw~n~~--~~~~F~~Ya~~v~~~fgdr--V~~W~TiNEP~~~~~~gy~~G~~~Pg~~~~ 186 (447)
T d1e4ia_ 114 PFCTLYHWDLPQALQD---AGGWGNRR--TIQAFVQFAETMFREFHGK--IQHWLTFNEPWCIAFLSNMLGVHAPGLTNL 186 (447)
T ss_dssp EEEEEESSCCBHHHHH---TTTTSSTH--HHHHHHHHHHHHHHHTBTT--BCEEEEEECHHHHHHHHHTSCCSTTCCCCH
T ss_pred EEEEeeccccchhhhc---CCCCCCHH--HHHHHHHHHHHHHHHhCCc--cceEEecCCCceeeecccccccccCcccch
Confidence 999997753 555422 22554432 4788999999999999997 5557789998531 1 122
Q ss_pred hHHH-------HHHHHHHHHHHhcCCCcEEEE
Q 008330 224 KDWY-------RYMQLGAEAVHAANPEVLVIL 248 (570)
Q Consensus 224 ~~W~-------~~~~~~~~aIr~~dp~~lIiV 248 (570)
...+ .....+++++|+..|+.-|-+
T Consensus 187 ~~~~~~~~~~~~AHa~a~~~~~~~~~~~~vGi 218 (447)
T d1e4ia_ 187 QTAIDVGHHLLVAHGLSVRRFRELGTSGQIGI 218 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEE
T ss_pred hhHHHhHHHHHHHHHHHHHHHHHhhhcceeee
Confidence 2222 222467788999988765544
|
| >d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Five-domain beta-mannosidase, domain 3 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.77 E-value=6.3e-09 Score=104.07 Aligned_cols=147 Identities=11% Similarity=0.070 Sum_probs=94.3
Q ss_pred CCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcc
Q 008330 50 NGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 50 ~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
+|+|++|||+||.-. .+..+ -......+.+++.||+||+|+||+--... +
T Consensus 21 NG~p~~lrG~~~~~~-~~~~~-~~~~e~~~~di~l~ke~G~N~IR~~~~~~------~---------------------- 70 (348)
T d2je8a5 21 NGIPMFAKGANYIPQ-DALLP-NVTTERYQTLFRDMKEANMNMVRIWGGGT------Y---------------------- 70 (348)
T ss_dssp TTEEECEEEEEECCS-CSSGG-GCCHHHHHHHHHHHHHTTCCEEEECTTSC------C----------------------
T ss_pred CCEEEEEeeEecCCC-CCCCC-CCCHHHHHHHHHHHHHcCCCEEecCCCCC------C----------------------
Confidence 899999999997322 12111 11223357789999999999999822110 0
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEE
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVG 209 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig 209 (570)
| =+.++++|.+.||+|+.++-... . .+..+. ...+.+.+.++.+..|++++|.|++
T Consensus 71 ---p----------~~~f~d~cD~~GilV~~e~~~~~-----~-----~~~~~~-~~~~~~~~~~~~~I~r~rNHPSIi~ 126 (348)
T d2je8a5 71 ---E----------NNLFYDLADENGILVWQDFMFAC-----T-----PYPSDP-TFLKRVEAEAVYNIRRLRNHASLAM 126 (348)
T ss_dssp ---C----------CHHHHHHHHHHTCEEEEECSCBS-----S-----CCCCCH-HHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred ---C----------CHHHHHHHHHCCCEEEeccchhc-----c-----CCCCCH-HHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 0 03567899999999999974211 1 111111 1245677889999999999999999
Q ss_pred EeccCCCCCCC--------CChhHH----H---H-HHHHHHHHHHhcCCCcEEEEeC
Q 008330 210 MSLRNELRGPK--------QNVKDW----Y---R-YMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 210 ~dL~NEP~~~~--------~~~~~W----~---~-~~~~~~~aIr~~dp~~lIiVeG 250 (570)
+.+.||+.... ...... . . +.......+++.+|..++....
T Consensus 127 W~~gnE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (348)
T d2je8a5 127 WCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRFYVHSS 183 (348)
T ss_dssp EESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTSEEESSB
T ss_pred EeccCccccchhhccchhhhhHHHHHHHHHhhhhhHHHHHHHHHHHhCCCCceecCC
Confidence 99999975320 011111 1 1 1123456678889998887654
|
| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermotoga maritima [TaxId: 2336]
Probab=98.75 E-value=4.6e-08 Score=102.83 Aligned_cols=136 Identities=8% Similarity=-0.005 Sum_probs=98.3
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|+.|+.++|..+.++. ..-.+...++.++++|+.+.++||.
T Consensus 59 y~eDi~l~~~lG~~~yRfsi~WsRi~P~g--------------------------~g~~n~~~~~~Y~~~i~~l~~~GI~ 112 (443)
T d2j78a1 59 WKEDIEIIEKLGVKAYRFSISWPRILPEG--------------------------TGRVNQKGLDFYNRIIDTLLEKGIT 112 (443)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHSTTS--------------------------SSCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHcCCCEEEccCCHHHceeCC--------------------------CCCcCHHHHHHHHHHHHHHHHcCCe
Confidence 68999999999999999999997766520 0123567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCC------------C-CCh
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP------------K-QNV 223 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~------------~-~~~ 223 (570)
.||.+|+.. |.|... ..||- ++ ...+.|.++-+.++++|++.-. -+=.+|||... . .+.
T Consensus 113 P~VTL~Hf~~P~wl~~---~gGw~-~~-~~v~~F~~Ya~~v~~~~gd~V~--~w~TiNEP~~~~~~gy~~G~~pPg~~~~ 185 (443)
T d2j78a1 113 PFVTIYHWDLPFALQL---KGGWA-NR-EIADWFAEYSRVLFENFGDRVK--NWITLNEPWVVAIVGHLYGVHAPGMRDI 185 (443)
T ss_dssp EEEEEESSCCBHHHHT---TTGGG-ST-THHHHHHHHHHHHHHHHTTTCC--EEEEEECHHHHHHHHHTSCSSTTCCCCH
T ss_pred eeEeecCccchhhhhh---cCCcc-Ch-HHHHHHHHHHHHHHHHhCcccc--ceEeccCceeEeecccccCcccccccch
Confidence 999998753 556422 22443 33 2478999999999999999733 35578998542 0 112
Q ss_pred hHH-------HHHHHHHHHHHHhcCCCcEE
Q 008330 224 KDW-------YRYMQLGAEAVHAANPEVLV 246 (570)
Q Consensus 224 ~~W-------~~~~~~~~~aIr~~dp~~lI 246 (570)
... .....+++++||+..|+..|
T Consensus 186 ~~~~~~~~n~l~AHa~A~~~~~~~~~~~~v 215 (443)
T d2j78a1 186 YVAFRAVHNLLRAHARAVKVFRETVKDGKI 215 (443)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCce
Confidence 112 13345778889998886543
|
| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Sorghum bicolor [TaxId: 4558]
Probab=98.72 E-value=3.5e-08 Score=104.96 Aligned_cols=110 Identities=12% Similarity=0.019 Sum_probs=82.9
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|+-|+.++|.-+.++. + .+.-.|+..++.++++|+++.++||.
T Consensus 69 y~eDi~l~~~lG~~~yRfSisWsRI~P~g----~--------------------~~g~~n~~gl~~Y~~~id~l~~~GI~ 124 (484)
T d1v02a_ 69 YAEDVRLLKEMGMDAYRFSISWPRILPKG----T--------------------LAGGINEKRVEYYNKLIDLLLENGIE 124 (484)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHSTTS----S--------------------STTCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHhCCCEEEccCCHHHcCCCC----C--------------------CCCCCCHHHHHHHHHHHHHHHHcCCe
Confidence 68999999999999999999997765521 0 11224678999999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.||.+|+.. |.|-.. ..|.|.++ ...+.|.++-+.++++|++.-. -+=.+|||.
T Consensus 125 P~vTL~Hfd~P~~l~~---~~Ggw~n~-~~~~~F~~Ya~~v~~~fgd~V~--~W~T~NEP~ 179 (484)
T d1v02a_ 125 PYITIFHWDTPQALVD---AYGGFLDE-RIIKDYTDFAKVCFEKFGKTVK--NWLTFNEPE 179 (484)
T ss_dssp EEEEEESSCCBHHHHH---HHCGGGST-HHHHHHHHHHHHHHHHHTTTCC--EEEEEECHH
T ss_pred EEEEecCCcccceeee---ecCcccCH-HHHHHHHHhhHHHHHHhcchhh--ceEEecCcc
Confidence 999998754 444311 11334443 2478999999999999999732 356889994
|
| >d1vcla2 b.42.2.1 (A:151-283) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemolytic lectin CEL-III, domains 1 and 2 species: Cucumaria echinata [TaxId: 40245]
Probab=98.71 E-value=1.2e-08 Score=89.41 Aligned_cols=114 Identities=18% Similarity=0.327 Sum_probs=81.9
Q ss_pred cceeeCCCCceeeeecCC--CCceecCCCCCC--CCccccCCcceeecccceEEeeccC--CccceeccccC-CCCCcee
Q 008330 411 HKVIYHPATGLCVQRKSF--LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKHV--GKPAKLGIICT-DCGSTWE 483 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~--~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~~--g~~~~~~~~c~-~~~~~W~ 483 (570)
+..|....||+|+++.+. ..++.+++|.++ +.|.++.++.|+...+++||++.+. |.++.+ +.|. .++|+|+
T Consensus 5 ~g~I~n~~sg~CLdv~~~~~g~~v~~~~c~~~~~Q~w~~~~~g~~~~~~s~~cLd~~~~~~~~~v~~-~~c~~~~~Q~W~ 83 (133)
T d1vcla2 5 YGRLRNEKSDLCLDVEGSDGKGNVLMYSCEDNLDQWFRYYENGEIVNAKSGMCLDVEGSDGSGNVGI-YRCDDLRDQMWS 83 (133)
T ss_dssp EEEEEETTTCCEEEESSSSSCEEEEEECCCSCGGGCEEEETTSCEEETTTCCEEEESSSSSCSBEEE-ECCCCCGGGCEE
T ss_pred EEEEEECCCCCEEEeCCCCCCCeEEEEecCCCccEEEEEecccceeeccCCceeeeccccCCCeeEE-EEeCCCccceEE
Confidence 346778999999998543 356899999986 7999999988887889999999874 555555 8999 7789999
Q ss_pred Eeec---cc-cEEEEecCCCceEEEeecC--CC-ceeecceeeeCCCCCCCccCceEEEE
Q 008330 484 IISD---SK-MHLSSKADNGTTVCLDVDS--SN-TIVTNTCKCLSRDKTCDPASQWFKLV 536 (570)
Q Consensus 484 ~~s~---~~-~~~~~~~~~~~~~cld~~~--~~-~~~~~~c~c~~~~~~~~~~~~~~~~~ 536 (570)
+..+ +. ..| ....+.+|||+.+ ++ .|+.+.|.- .| +|-||+|
T Consensus 84 ~~~~~~~~~~~~i---~~~~s~~cLd~~~~~~g~~v~~~~c~~-------~~-~Q~W~f~ 132 (133)
T d1vcla2 84 RPNAYCNGDYCSF---LNKESNKCLDVSGDQGTGDVGTWQCDG-------LP-DQRFKWV 132 (133)
T ss_dssp CCGGGCBTTEECC---EETTTCCEEEESSSSSCSBEEEECCCC-------CG-GGCEEEE
T ss_pred EcccccCCccEEE---EEcCCCCEEEecCCCCCceEEEEcCCC-------CH-HhCEEEe
Confidence 8543 22 222 2335789999963 33 566676631 23 4777765
|
| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces lividans [TaxId: 1916]
Probab=98.71 E-value=3.7e-08 Score=98.25 Aligned_cols=206 Identities=14% Similarity=0.142 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHhcCCCEEEEe---cCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 141 IKAFQAVVASLGNNNVMVILD---NHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VILD---~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
++.+|++|++|.++||.|+-- .|...|.|.... +.....+.+.++.+.+++||++. |..+|+.|||.
T Consensus 60 ~~~~D~~v~~a~~~gi~v~gh~l~w~~~~p~w~~~~--------~~~~~~~~~~~~i~~~~~ry~g~--i~~WdV~NEp~ 129 (302)
T d1v0la_ 60 FSSADRVYNWAVQNGKQVRGHTLAWHSQQPGWMQSL--------SGSALRQAMIDHINGVMAHYKGK--IVQWDVVNEAF 129 (302)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSSSCCHHHHTC--------CHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEECCB
T ss_pred hHHHHHHHHHHHHCCCEEEEeccccchhcccccccc--------CcHHHHHHHHHHHHHHHhhcCCC--ceEEEEecccc
Confidence 467999999999999998521 233333332110 01112456778889999999987 67799999995
Q ss_pred CCC---CChhHHH-----HHHHHHHHHHHhcCCCcEEEEeCCCCCCcc--------hhhh---hcccCcCCCCCEEEEEe
Q 008330 218 GPK---QNVKDWY-----RYMQLGAEAVHAANPEVLVILSGLNFDKDL--------SFVR---NQAVNLTFTGKLVFEAH 278 (570)
Q Consensus 218 ~~~---~~~~~W~-----~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl--------~~~~---~~p~~l~~~~nlVys~H 278 (570)
... .....|. +++..+.+++|+++|+..+++.+.+--... ..+. ... .++ +-+-+..|
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~i~~a~~~ar~~dP~a~l~~n~~~~~~~~~~~~~~~~~~v~~l~~~g--~~i-dgiG~Q~H 206 (302)
T d1v0la_ 130 ADGSSGARRDSNLQRSGNDWIEVAFRTARAADPSAKLCYNDYNVENWTWAKTQAMYNMVRDFKQRG--VPI-DCVGFQSH 206 (302)
T ss_dssp CSSSSCCBCCSHHHHTCTTHHHHHHHHHHHHCTTSEEEEEESSCCSTTSHHHHHHHHHHHHHHHHT--CCC-CEEEECCE
T ss_pred cCCCCccccCcccccchHHHHHHHHHHHHHhCCCCEEeecCcccccCChHHHHHHHHHHHHHHhCC--CCc-cceEEeec
Confidence 321 0111222 477889999999999999999875432110 1111 111 122 34445555
Q ss_pred ecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHHC-C-CceEEec
Q 008330 279 WYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAEL-D-WDWALWT 356 (570)
Q Consensus 279 ~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~-g-igw~~W~ 356 (570)
++.... ....+.+.+++ +.+.|+||+|+||++... +..+++.++..+-++ . .+-++|.
T Consensus 207 ~~~~~p-----------~~~~~~~~l~~----~~~~glpi~iTE~d~~~~-----qa~~~~~~~~~~~s~~~v~gi~~Wg 266 (302)
T d1v0la_ 207 FNSGSP-----------YNSNFRTTLQN----FAALGVDVAITELDIQGA-----PASTYANVTNDCLAVSRCLGITVWG 266 (302)
T ss_dssp EBTTBC-----------CCTTHHHHHHH----HHTTTCEEEEEEEEETTC-----CHHHHHHHHHHHHTCTTEEEEEESC
T ss_pred cCCCCC-----------CHHHHHHHHHH----HHhcCCceEEeeccCCCC-----CHHHHHHHHHHHHhhhCCeEEEECC
Confidence 543111 11234444443 345789999999999753 244555565555443 2 2456787
Q ss_pred cCceeecccCccCCCceeeeecCCCCCc
Q 008330 357 LVGSYYLREGVIGLNEYYGLFDWNWCDI 384 (570)
Q Consensus 357 ~~G~y~~r~~~~~~~et~Gll~~dw~~~ 384 (570)
+...+-.+ .+..+||++.|++.-
T Consensus 267 ~~D~~~w~-----~~~~~~L~d~d~~pK 289 (302)
T d1v0la_ 267 VRDSDSWR-----SEQTPLLFNNDGSKK 289 (302)
T ss_dssp SBGGGSTT-----GGGCCSSBCTTSCBC
T ss_pred CccCCCCC-----CCCCCccCCCCCCCC
Confidence 64222111 234578999998543
|
| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Streptomyces sp. [TaxId: 1931]
Probab=98.71 E-value=9.5e-08 Score=100.99 Aligned_cols=107 Identities=7% Similarity=-0.010 Sum_probs=83.2
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|++||+|+-|+.++|.-+.++. +.-.+...++.++++|+++.++||.
T Consensus 59 y~eDi~l~~~lG~~~yRfSi~WsRI~P~g--------------------------~g~~n~~gl~~Y~~~i~~l~~~GI~ 112 (464)
T d1gnxa_ 59 WREDVALMAELGLGAYRFSLAWPRIQPTG--------------------------RGPALQKGLDFYRRLADELLAKGIQ 112 (464)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHSGGG--------------------------SSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHcCCCEEEccCCHHHcccCC--------------------------CCCcCHHHHHHHHHHHHHHHHcCCE
Confidence 68999999999999999999997665420 1123567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.||.+|+.. |.|... -.||-+.. ..+.|.++-+.++++|++.-. -+=.+|||.
T Consensus 113 P~VTL~HfdlP~~l~~---~gGW~n~~--~v~~F~~YA~~v~~~fgd~Vk--~W~T~NEP~ 166 (464)
T d1gnxa_ 113 PVATLYHWDLPQELEN---AGGWPERA--TAERFAEYAAIAADALGDRVK--TWTTLNEPW 166 (464)
T ss_dssp EEEEEESSCCBHHHHH---TTCTTSTH--HHHHHHHHHHHHHHHHTTTCC--EEEEEECHH
T ss_pred EEEEEecCccHHHHhh---hCCCCCHH--HHHHHHHHHHHHHHHhccccc--eeEEccCch
Confidence 999998864 556421 22544332 478999999999999999733 366899994
|
| >d1ggpb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]
Probab=98.70 E-value=1.1e-08 Score=89.29 Aligned_cols=113 Identities=18% Similarity=0.319 Sum_probs=80.2
Q ss_pred ccceeeCCCCceeeeecCCCCceecCCCCCC---CCccccCCcceeec-ccceEEeeccC--CccceeccccC-CCCCce
Q 008330 410 LHKVIYHPATGLCVQRKSFLDPLTLGPCTES---EAWSYTPHKTISLK-GAYFCLQAKHV--GKPAKLGIICT-DCGSTW 482 (570)
Q Consensus 410 ~~~~~~~~~tg~c~~~~~~~~~~~~~~c~~~---~~W~~~~~~~~~~~-~~~~cl~a~~~--g~~~~~~~~c~-~~~~~W 482 (570)
+....-.-.+++|+++.+...++.+.+|+.+ ++|++++++.|+.. .+++||++.+. |.++++ ..|. +.+|+|
T Consensus 4 ~~~~~~~g~~~lCLd~~~~~~~v~l~~C~~~~~nQ~W~~~~dg~ir~~~~~~~CL~~~~~~~g~~V~~-~~C~~~~~Q~W 82 (128)
T d1ggpb2 4 ASVTQISGSAQLCMQAGNGPANLWMSECRAGKAEQQWALLTDKSIRSETNSDNCLTSAADAGPKTILL-ALCSGPASQRW 82 (128)
T ss_dssp CEEEEEECGGGCEECC-TTT-BCCEECCCSSCTTSEEEEETTTEEEESSCTTEEECCCCCSSCCCCBE-EECCCCTTSCC
T ss_pred CcEEEEEeeCCcCEecCCCCceEEEEeCCCCCcceEEEEcCCCCEEEcccCceeEeecccCCCCeEEE-EecCCCcceEE
Confidence 3333345568999998654456899999753 78999999988753 46899998763 666666 7888 788999
Q ss_pred eEeeccccEEEEecCCCceEEEeecC---CC-ceeecceeeeCCCCCCCccCceEEE
Q 008330 483 EIISDSKMHLSSKADNGTTVCLDVDS---SN-TIVTNTCKCLSRDKTCDPASQWFKL 535 (570)
Q Consensus 483 ~~~s~~~~~~~~~~~~~~~~cld~~~---~~-~~~~~~c~c~~~~~~~~~~~~~~~~ 535 (570)
++-+++.+ . ...+++|||+.+ ++ .|+.+.|. + .|..||+-+
T Consensus 83 ~~~~~g~i--~---n~~sg~CLDv~g~~~~g~~v~~~~c~---g----~~nQ~W~~~ 127 (128)
T d1ggpb2 83 VFDDDGSI--L---SLYDDKQMDSEGAAAAAKQIILWWNA---A----EPNQIWLAL 127 (128)
T ss_dssp EECTTSSE--E---ETTTTEEEEESSSCCSSSCEEEECCC---C----CGGGCCEEE
T ss_pred EEeCCCcE--E---EeeCCceEecccCCCCCCEEEEEcCC---C----ChhcEEEeC
Confidence 99777763 2 235789999963 34 56667762 2 367888755
|
| >d1knma_ b.42.2.1 (A:) Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) species: Streptomyces lividans [TaxId: 1916]
Probab=98.70 E-value=1.4e-08 Score=88.39 Aligned_cols=100 Identities=22% Similarity=0.378 Sum_probs=77.0
Q ss_pred cceeeCCCCceeeeecCC----CCceecCCCCCC--CCccccCCcceeecccceEEeecc--CCccceeccccC-CCCCc
Q 008330 411 HKVIYHPATGLCVQRKSF----LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICT-DCGST 481 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~----~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~-~~~~~ 481 (570)
+..|....||+|+++.+. ..+|.+++|.++ ++|.++..+.|++ .+++||++.+ .|.++++ ..|. +++|+
T Consensus 5 ~~~i~n~~sg~cLdv~~~~~~~g~~v~~~~c~~~~~Q~w~~~~~g~i~~-~~~~cLd~~~~~~g~~v~~-~~c~~~~~Q~ 82 (129)
T d1knma_ 5 GGQIKGVGSGRCLDVPDASTSDGTQLQLWDCHSGTNQQWAATDAGELRV-YGDKCLDAAGTSNGSKVQI-YSCWGGDNQK 82 (129)
T ss_dssp CBCCEETTTCCEEECGGGCCCTTCBCEEECCCSCGGGCBEECTTSCEEE-TTTEEEEESCSSTTCBEEE-EECCCCGGGC
T ss_pred cEEEEECCCCCEEEcCCCCCCCCeEEEEeCCCCCcccceEEcccCcEEe-cCCcceeeccccCCCEEEE-EeCCCCCeEE
Confidence 467888899999998432 356999999986 6999999988875 7899999987 4666666 7888 77899
Q ss_pred eeEeeccccEEEEecCCCceEEEeecC----CC-ceeecce
Q 008330 482 WEIISDSKMHLSSKADNGTTVCLDVDS----SN-TIVTNTC 517 (570)
Q Consensus 482 W~~~s~~~~~~~~~~~~~~~~cld~~~----~~-~~~~~~c 517 (570)
|.+.+++.+ ..+ .+.+|||+.+ +| .|+.+.|
T Consensus 83 W~~~~~g~i--~~~---~s~~cLdv~~~~~~~g~~v~~~~c 118 (129)
T d1knma_ 83 WRLNSDGSV--VGV---QSGLCLDAVGNGTANGTLIQLYTC 118 (129)
T ss_dssp EEECTTSCE--EET---TTCCEEEEGGGCCSTTCBEEEECC
T ss_pred EEEeCCceE--Ecc---CCCeEEEECCCCCCCCCEEEEEeC
Confidence 999877663 323 4689999963 45 5666776
|
| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Probab=98.69 E-value=5.1e-07 Score=94.81 Aligned_cols=139 Identities=10% Similarity=-0.003 Sum_probs=100.4
Q ss_pred hHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 77 PMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
-.+++++.|+++|+|+-|+.++|..+.++. ..-.|...++.++++|+++.++||
T Consensus 59 ~y~eDi~l~~~lG~~~yRfSi~WsRi~P~g--------------------------~g~~n~~~~~~Y~~~i~~l~~~gi 112 (449)
T d1qoxa_ 59 RVEEDVQLLKDLGVKVYRFSISWPRVLPQG--------------------------TGEVNRAGLDYYHRLVDELLANGI 112 (449)
T ss_dssp CHHHHHHHHHHHTCSEEEEECCHHHHSTTS--------------------------SSSCCHHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHcCCCEEEccCCHHHcccCC--------------------------CCCcCHHHHHHHHHHHHHHHhcCC
Confidence 369999999999999999999997766520 011356789999999999999999
Q ss_pred EEEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCC-------------CCC
Q 008330 157 MVILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP-------------KQN 222 (570)
Q Consensus 157 ~VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~-------------~~~ 222 (570)
..+|.+|+.. |.|... ..||-+ + ...+.|.++-+.++++|++. |--+=.+|||... ..+
T Consensus 113 ~P~vTL~H~d~P~~l~~---~gGw~~-~-~~~~~F~~Ya~~v~~~fgd~--V~~W~T~NEP~~~~~~gy~~g~~~Pg~~~ 185 (449)
T d1qoxa_ 113 EPFCTLYHWDLPQALQD---QGGWGS-R-ITIDAFAEYAELMFKELGGK--IKQWITFNEPWCMAFLSNYLGVHAPGNKD 185 (449)
T ss_dssp EEEEEEESSCCBHHHHT---TTGGGS-T-HHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCC
T ss_pred eEEEEEecccccchhcc---ccCcCC-H-HHHHHHHHHHHHHHHHhccc--ccceEEecCcceeccccccccccCccccc
Confidence 9999998754 555422 224433 3 24788999999999999996 4446689999542 012
Q ss_pred hhHHH-------HHHHHHHHHHHhcCCCcEEEE
Q 008330 223 VKDWY-------RYMQLGAEAVHAANPEVLVIL 248 (570)
Q Consensus 223 ~~~W~-------~~~~~~~~aIr~~dp~~lIiV 248 (570)
..... ....++++++|+..++..|.+
T Consensus 186 ~~~~~~~~~~~~~Aha~a~~~~~~~~~~~~vgi 218 (449)
T d1qoxa_ 186 LQLAIDVSHHLLVAHGRAVTLFRELGISGEIGI 218 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCceeee
Confidence 22221 233567788999998765554
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=98.69 E-value=4.5e-08 Score=97.04 Aligned_cols=120 Identities=19% Similarity=0.300 Sum_probs=83.2
Q ss_pred cCCCCCChHHHHHHHHHHcCCcEEEecc-cccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHH
Q 008330 70 AEGLSKQPMDMLSKRVVDMGFNCVRLTW-PLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVV 148 (570)
Q Consensus 70 ~~Gl~~~~~~~~~~~i~~~GfN~VRlPi-~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV 148 (570)
|+-+.....+++++.||++|+|+||+.+ +|..+++. |...+ ++.+|++|
T Consensus 8 p~~~~~~~~~~D~~~~~~~G~n~vR~~i~~W~~iep~---------------------------~G~~~---~~~~d~~i 57 (393)
T d1kwga2 8 PEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPE---------------------------PGRLE---WGWLDEAI 57 (393)
T ss_dssp GGGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSB---------------------------TTBCC---CHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHcCCCEEEecccchhhcCCC---------------------------CCccC---HHHHHHHH
Confidence 3333333578999999999999999997 88665541 11112 46789999
Q ss_pred HHHhcCCCEEEEecCCCC-CCcccc--------CCCCC-----CCCCCCCCC---HHHHHHHHHHHHHHhCCCCcEEEEe
Q 008330 149 ASLGNNNVMVILDNHISK-PGWCCS--------NSDGN-----GFFGDQYFN---PDLWIKGLTKMATIFNGVRNVVGMS 211 (570)
Q Consensus 149 ~~a~~~Gl~VILD~H~~~-~~w~~~--------~~dgn-----g~~~d~~~~---~~~~~~~w~~iA~ryk~~p~Vig~d 211 (570)
+.|.++||+|||.+|+.. |.|... ..++. ......+.+ .+.+.++++.++.+|++++.+..++
T Consensus 58 ~~~~~~Gi~~iv~l~~~~~P~w~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (393)
T d1kwga2 58 ATLAAEGLKVVLGTPTATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQ 137 (393)
T ss_dssp HHHHTTTCEEEEECSTTSCCHHHHHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred HHHHHCCCEEEEEcCCCCCchhhhccCcccccccCCCcccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEe
Confidence 999999999999988753 444211 11111 000001122 4567789999999999999999999
Q ss_pred ccCCCCCC
Q 008330 212 LRNELRGP 219 (570)
Q Consensus 212 L~NEP~~~ 219 (570)
+.|||...
T Consensus 138 ~~ne~~~~ 145 (393)
T d1kwga2 138 TDNEYGCH 145 (393)
T ss_dssp CSSSTTTT
T ss_pred eccccccc
Confidence 99999764
|
| >d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: 6-phospho-beta-D-galactosidase, PGAL species: Lactococcus lactis [TaxId: 1358]
Probab=98.68 E-value=1.7e-07 Score=99.15 Aligned_cols=137 Identities=12% Similarity=0.040 Sum_probs=97.8
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|+-|+.++|..+.++. +.-.|+..++.++.+|+++.++||.
T Consensus 56 y~eDi~l~~~lG~~~yRfSisWsRI~P~g--------------------------~g~~n~~gl~~Y~~~id~l~~~GI~ 109 (468)
T d1pbga_ 56 YPVDLELAEEYGVNGIRISIAWSRIFPTG--------------------------YGEVNEKGVEFYHKLFAECHKRHVE 109 (468)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHSTTS--------------------------SSSCCHHHHHHHHHHHHHHHHHTCE
T ss_pred hHHHHHHHHHhCCCEEEccCCHHHcCcCC--------------------------CCCcCHHHHHHHHHHHHHHHHhCCe
Confidence 68999999999999999999997765521 1124668999999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCC--------------CCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP--------------KQN 222 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~--------------~~~ 222 (570)
.+|.+|+.. |.|... ..||-+ + ...+.|.++-+.++++|++.. -+=.+|||... ...
T Consensus 110 P~VTL~H~dlP~~l~~---~GGw~~-~-~~v~~F~~Ya~~~~~~fgdvk---~W~T~NEP~~~~~~gy~~G~~~P~~~~~ 181 (468)
T d1pbga_ 110 PFVTLHHFDTPEALHS---NGDFLN-R-ENIEHFIDYAAFCFEEFPEVN---YWTTFNEIGPIGDGQYLVGKFPPGIKYD 181 (468)
T ss_dssp EEEEEESSCCBHHHHH---TTGGGS-T-HHHHHHHHHHHHHHHHCTTCC---EEEEESCHHHHHHHHHTSCCSTTCCCSC
T ss_pred eEEEEecccchhhHhh---cCccCC-H-HHHHHHHHHHHHHHHhcCCce---EEEEecCccccccccccccccCCccccc
Confidence 999998754 555321 124443 3 247889999999999997642 37789998731 112
Q ss_pred hhHHH-------HHHHHHHHHHHhcCCCcEEEE
Q 008330 223 VKDWY-------RYMQLGAEAVHAANPEVLVIL 248 (570)
Q Consensus 223 ~~~W~-------~~~~~~~~aIr~~dp~~lIiV 248 (570)
...-+ ....++++++|+..++..|.+
T Consensus 182 ~~~~~~~~hn~l~AHa~a~~~~~~~~~~~~ig~ 214 (468)
T d1pbga_ 182 LAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGV 214 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEE
T ss_pred hhhHHHhhhhHHHHHHHHHHHHHhhccccccce
Confidence 22222 222467788888888765544
|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase 10c species: Cellvibrio japonicus [TaxId: 155077]
Probab=98.67 E-value=9e-08 Score=97.92 Aligned_cols=217 Identities=14% Similarity=0.162 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHhcCCCEEE---EecCCCCCCccccCCCCCCCCCCCCCC----HHHHHHHHHHHHHHhCCCCcEEEEecc
Q 008330 141 IKAFQAVVASLGNNNVMVI---LDNHISKPGWCCSNSDGNGFFGDQYFN----PDLWIKGLTKMATIFNGVRNVVGMSLR 213 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VI---LD~H~~~~~w~~~~~dgng~~~d~~~~----~~~~~~~w~~iA~ryk~~p~Vig~dL~ 213 (570)
++.+|++|++|.++||.|. |-.|...+.| .|..+...+ .+.+.++.+.+++||++...|..+|+.
T Consensus 70 f~~~D~~v~~a~~~gi~v~GH~lvW~~~~~~~--------~~~~~~~~~~~~~~~~~~~~I~~vv~ry~~~G~I~~WDVv 141 (364)
T d1us3a2 70 FTNADAFVDWATENNMTVHGHALVWHSDYQVP--------NFMKNWAGSAEDFLAALDTHITTIVDHYEAKGNLVSWDVV 141 (364)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEECCGGGSC--------HHHHTCCSCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEEeecCCCcccCCc--------cccccCCccHHHHHHHHHHHHHHHHHhhccCCceEEEEEe
Confidence 5679999999999999986 4445422111 011111112 234557888999999966679999999
Q ss_pred CCCCCCC------CChhHHHH-------HHHHHHHHHHhcCCCcEEEEeCCCCCCcc-------hh---hhhcccCcCCC
Q 008330 214 NELRGPK------QNVKDWYR-------YMQLGAEAVHAANPEVLVILSGLNFDKDL-------SF---VRNQAVNLTFT 270 (570)
Q Consensus 214 NEP~~~~------~~~~~W~~-------~~~~~~~aIr~~dp~~lIiVeG~~w~~dl-------~~---~~~~p~~l~~~ 270 (570)
|||.... .....|+. ++..+.+++|+++|+..+++...+-..+- .. +.... .+ -
T Consensus 142 NEp~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Af~~Ar~~~p~a~l~~ndy~~~~~~~~~~~~~~~v~~l~~~g--~~-i 218 (364)
T d1us3a2 142 NEAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQTARAADPAVILYYNDYNIEQNNAKTTKMVDMVKDFQARS--IP-I 218 (364)
T ss_dssp ECCBCSSSSCCBCCTTCHHHHHTTSCSHHHHHHHHHHHHHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHTT--CC-C
T ss_pred cccccCCCCcccccccchHHHHhCCchHHHHHHHHHHHHhccccceeeccccccccchhhhHHHHHHHHHHhCC--Cc-c
Confidence 9995321 11223433 67788899999999999999765421110 01 11111 12 2
Q ss_pred CCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCc-----------------c
Q 008330 271 GKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNV-----------------N 333 (570)
Q Consensus 271 ~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~-----------------~ 333 (570)
+-+-+..|.|.... ....+.+.+++ +.+.|.||+|+||++....... .
T Consensus 219 dgiG~Q~H~~~~~p-----------~~~~i~~~l~~----~~~~g~~I~iTEldi~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (364)
T d1us3a2 219 DGVGFQMHVCMNYP-----------SIANISAAMKK----VVDLGLLVKITELDVAVNQPHCDAYPANKINPLTEAAQLA 283 (364)
T ss_dssp CEEEECCEEESSCS-----------CHHHHHHHHHH----HHTTTCEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHH
T ss_pred ccceeeeeccCCCC-----------CHHHHHHHHHH----HHhcCCeeEEEeeeEecccCccccccccccCCCChHHHHH
Confidence 45666778764211 12344444443 3347999999999986532210 1
Q ss_pred hHHHHHHHHHHHHHC-C----CceEEeccCceeeccc-----Ccc-CCCceeeeecCCCCC
Q 008330 334 DNRYLNCFFGVAAEL-D----WDWALWTLVGSYYLRE-----GVI-GLNEYYGLFDWNWCD 383 (570)
Q Consensus 334 ~~~~~~~~~~~~~~~-g----igw~~W~~~G~y~~r~-----~~~-~~~et~Gll~~dw~~ 383 (570)
..+++..++..+.++ . .+-++|.+...|-.++ +.+ .....+||++.|+..
T Consensus 284 QA~~~~~~~~~~~~~~~~~~~~~vt~Wg~~D~~sW~~~~~~~~~~~~~~~~~lL~d~d~~p 344 (364)
T d1us3a2 284 QKKRYCDVVKAYLDTVPVNQRGGISVWGTTDANTWLDGLYREQFEDEKISWPLLFDNNYND 344 (364)
T ss_dssp HHHHHHHHHHHHHHHSCGGGEEEEEESCSBGGGCHHHHHTTTTTTTCCCCCCSSBCTTSCB
T ss_pred HHHHHHHHHHHHHhcccccccceEEEecCCcCCccccCCCCCcccccccCCCccCCCCCCC
Confidence 235556666655543 2 2567898764443221 111 224557789988764
|
| >d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=98.64 E-value=1.4e-06 Score=92.42 Aligned_cols=165 Identities=11% Similarity=0.093 Sum_probs=99.5
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhcc-chhhc--cCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLG-LLEAI--GGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg-~~~~~--~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
.+++++.|+++|+|+-|+.++|.-+.++..... ....+..+ .++.. ...........|...++.++++|+++.++
T Consensus 63 y~eDi~l~~~lG~~~yRfSI~WsRI~P~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~n~~gl~~Y~~~id~l~~~ 140 (489)
T d1uwsa_ 63 YKTFHDNAQKMGLKIARLNVEWSRIFPNPLPRP--QNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLKSR 140 (489)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHCCSCCCCC----CCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEecccHHhcCcCCCccc--cccccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHc
Confidence 589999999999999999999987766321000 00000000 00000 00000001234678999999999999999
Q ss_pred CCEEEEecCCCC-CCccccC--------CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCC------
Q 008330 155 NVMVILDNHISK-PGWCCSN--------SDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP------ 219 (570)
Q Consensus 155 Gl~VILD~H~~~-~~w~~~~--------~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~------ 219 (570)
||..||.+|+.. |.|.... ....||-+.+ ..+.|.++-+.++++|++.-. -+=.+|||...
T Consensus 141 GIeP~VTL~H~dlP~~L~d~~~~~~~~f~~~GGW~n~~--~v~~F~~YA~~v~~~fgdrVk--~WiTiNEP~~~~~~gy~ 216 (489)
T d1uwsa_ 141 GLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTR--TVYEFARFSAYIAWKFDDLVD--EYSTMNEPNVVGGLGYV 216 (489)
T ss_dssp TCEEEEESCSSCCBTTTBCHHHHHTTCCSSCBGGGSHH--HHHHHHHHHHHHHHHHTTTCS--EEEEEECHHHHHHHHHT
T ss_pred CCccEEEEcCCCCcHHHHhhhhccccccccCCCcCCHH--HHHHHHHHHHHHHHHhcCcce--EEEeeCCCcEEeecccc
Confidence 999999998764 6664320 0012444332 368899999999999999633 24478998421
Q ss_pred ---------CCChhHH-------HHHHHHHHHHHHhcCCCcEEEE
Q 008330 220 ---------KQNVKDW-------YRYMQLGAEAVHAANPEVLVIL 248 (570)
Q Consensus 220 ---------~~~~~~W-------~~~~~~~~~aIr~~dp~~lIiV 248 (570)
..+.... .....++++++|+..+..+-++
T Consensus 217 g~~~~~pp~~~~~~~~~~~~hn~l~Aha~a~~~~~~~~~~~igi~ 261 (489)
T d1uwsa_ 217 GVKSGFPPGYLSFELSRRAMYNIIQAHARAYDGIKSVSKKPVGII 261 (489)
T ss_dssp CGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred cccCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcceeE
Confidence 0122212 2233567788888887655333
|
| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Thermosphaera aggregans [TaxId: 54254]
Probab=98.60 E-value=1.1e-06 Score=92.97 Aligned_cols=285 Identities=11% Similarity=0.088 Sum_probs=154.4
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCC-------CCCCCchHHHHHHHHHHH
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNN-------PSIVDLPLIKAFQAVVAS 150 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~n-------P~~~~~t~l~~ld~vV~~ 150 (570)
.+++++.|+++|+|+-|+.++|.-+.++.-....+.-+++.-|-- .. ...| -...|+..++.++++|++
T Consensus 62 y~eDi~l~~~lG~~~yRfSi~WsRi~P~g~~~~~~~~~~~~~G~~---~~-~~~~~~~~~~~~~~~n~~gv~~Y~~~i~~ 137 (481)
T d1qvba_ 62 NQNDHDLAEKLGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSI---VH-VDVDDKAVERLDELANKEAVNHYVEMYKD 137 (481)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHCSSCCTTSCCCEEECTTSCE---EE-ECCCHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHcCCCEEEccCcHHhcCcCCCCcccccccccccccc---cc-cccccchhhhccccCCHHHHHHHHHHHHH
Confidence 489999999999999999999987765310000000000000000 00 0000 001356789999999999
Q ss_pred HhcCCCEEEEecCCCC-CCccccCC---------CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCC-
Q 008330 151 LGNNNVMVILDNHISK-PGWCCSNS---------DGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGP- 219 (570)
Q Consensus 151 a~~~Gl~VILD~H~~~-~~w~~~~~---------dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~- 219 (570)
+.++||..||.+|+.. |.|..... ...||-+.. ..+.|.++-+.++++|++.-. -+=.+|||...
T Consensus 138 l~~~GI~P~VTL~H~dlP~~L~d~~~~~~~g~~~~~GGW~n~~--~v~~F~~YA~~v~~~fgdrVk--~WiTiNEP~~~~ 213 (481)
T d1qvba_ 138 WVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEE--SVVEFAKYAAYIAWKMGELPV--MWSTMNEPNVVY 213 (481)
T ss_dssp HHTTTCEEEEESCCSCCBTTTBCHHHHHHHCGGGSCBGGGSTH--HHHHHHHHHHHHHHHHTTSCS--EEEEEECHHHHH
T ss_pred HHHhCCeeEEEEecCCCcHHHhhhhhcccccccccCCCccCHH--HHHHHHHHHHHHHHHhcchhh--eeEecCCCcEEE
Confidence 9999999999998754 66643200 012444332 478999999999999998733 35688999421
Q ss_pred -------------C-CChhHHH-------HHHHHHHHHHHhcCCCcEEEEeCCCCC------Ccc-h------------h
Q 008330 220 -------------K-QNVKDWY-------RYMQLGAEAVHAANPEVLVILSGLNFD------KDL-S------------F 259 (570)
Q Consensus 220 -------------~-~~~~~W~-------~~~~~~~~aIr~~dp~~lIiVeG~~w~------~dl-~------------~ 259 (570)
. .+..... ....+++++||+..+..+=++-...|. .+. . .
T Consensus 214 ~~gy~~~~G~~~Pg~~~~~~~~~a~~~~l~AHa~A~~~~~~~~~~~igi~~~~~~~~~~~~~~~~~~~~~~~~~~~f~d~ 293 (481)
T d1qvba_ 214 EQGYMFVKGGFPPGYLSLEAADKARRNMIQAHARAYDNIKRFSKKPVGLIYAFQWFELLEGPAEVFDKFKSSKLYYFTDI 293 (481)
T ss_dssp HHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEECCEEECSSSCCSHHHHHHHHHTSTTTTH
T ss_pred eeccccccccCCCCccchhhHhHHHHHHHHHHHHHHHHHhhcccCccceEEecccccccCCcHHHHHHHHHHhcccccch
Confidence 0 1222221 233567778898887654333222221 010 0 0
Q ss_pred hh--hcccCcCC-----CCCEEEEEeecCCCCC----------C--CC-----CCCCC---------cchhhHHHHHHHH
Q 008330 260 VR--NQAVNLTF-----TGKLVFEAHWYGFTDG----------Q--AW-----VDGNP---------NQVCGRVVDNVMR 306 (570)
Q Consensus 260 ~~--~~p~~l~~-----~~nlVys~H~Y~~~~~----------~--~w-----~~~~~---------~~~~~~~~~~~~~ 306 (570)
+. ..+++... ..--.+.+-+|..... . .. ...+. .-.+..+...+..
T Consensus 294 ~~~g~~~~~~~~~~~i~~~~DfiGiNyYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~P~Gl~~~L~~ 373 (481)
T d1qvba_ 294 VSKGSSIINVEYRRDLANRLDWLGVNYYSRLVYKIVDDKPIILHGYGFLCTPGGISPAENPCSDFGWEVYPEGLYLLLKE 373 (481)
T ss_dssp HHHSCCSSCCCCCTTTSSCCSEEEEECCCEEEEECCTTCCEECTTSGGGSCTTCBCTTSCBBCTTCCBCCTHHHHHHHHH
T ss_pred hhcCCcccCHHHHHHhhccCCccccccccceEEeccCCCccccccccccccCCCcCCCCCCCCccccccCcHHHHHHHHH
Confidence 00 00111100 0112445555532110 0 00 00000 0013334333332
Q ss_pred HHHHHH-hcCCCeEEeccccCCCCCCcchHHHHHHHHHHHH---HCCC---ceEEeccCceeecccCccCCCceeeeec
Q 008330 307 LSGFLL-EQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAA---ELDW---DWALWTLVGSYYLREGVIGLNEYYGLFD 378 (570)
Q Consensus 307 ~~g~l~-~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~---~~gi---gw~~W~~~G~y~~r~~~~~~~et~Gll~ 378 (570)
+. +.+.|++|+|-|..... +..+..|++..+..+. +.|+ |+++|++-..|-.. .+....|||+.
T Consensus 374 ----~~~~Y~~Pi~ITENG~~~~~-D~~Ri~yl~~hL~~~~~Ai~dGv~V~GY~~WSl~Dn~EW~---~Gy~~RfGL~~ 444 (481)
T d1qvba_ 374 ----LYNRYGVDLIVTENGVSDSR-DALRPAYLVSHVYSVWKAANEGIPVKGYLHWSLTDNYEWA---QGFRQKFGLVM 444 (481)
T ss_dssp ----HHHHHCCEEEEEECCCCCTT-CSSHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCCCGG---GTTSSCCCSEE
T ss_pred ----HHHhcCCCEEEECCCCCccc-ChHHHHHHHHHHHHHHHHHHCCCCEEEEeeccchhhhChh---hcccccCceEE
Confidence 22 25789999999987543 3346677776665543 3454 79999987665443 34567899964
|
| >d1vcla1 b.42.2.1 (A:1-150) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemolytic lectin CEL-III, domains 1 and 2 species: Cucumaria echinata [TaxId: 40245]
Probab=98.54 E-value=6.7e-08 Score=86.29 Aligned_cols=107 Identities=12% Similarity=0.228 Sum_probs=75.4
Q ss_pred cceeeCCCCceeeeecCC--CCceecCCCCCC--CCccccCCcceeecccceEEeeccCCccceec----cccC-CCCCc
Q 008330 411 HKVIYHPATGLCVQRKSF--LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKHVGKPAKLG----IICT-DCGST 481 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~--~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~~g~~~~~~----~~c~-~~~~~ 481 (570)
...+....||+|+++.+. ...+.+++|+++ ++|.++.++.|+...+++||++.+.+....+. ..|. .++|+
T Consensus 10 ~G~irn~~sg~CLDv~g~~~~~~v~~~~C~g~~~Q~w~~~~~g~ir~~~s~~cLd~~~~~~~~~~~~~~~~~~~g~~~Q~ 89 (150)
T d1vcla1 10 IGELRSFKSKQCVDIVGNQGSGNIATYDCDGLSDQQIIICGDGTIRNEARNYCFTPDGSGNANVMSSPCTLYPEIPSSQR 89 (150)
T ss_dssp EECEEETTTCCEEEESSSSSCEEEEEECCCCCGGGSEEEETTSCEEESSSSEEEEESSSSSEEEEEEECCCSSSCCGGGC
T ss_pred cEEEEECCCCccEEcCCCCCCCeeEEEeccCCcceEEEEEccccEEEeccCceEeecCCCCCceEEEEEEecCCCCcccE
Confidence 467788999999998443 345899999986 79999999999888899999998765432222 3445 56799
Q ss_pred eeEeeccccE-------EEE-ecCCCceEEEeecC---CCceeecce
Q 008330 482 WEIISDSKMH-------LSS-KADNGTTVCLDVDS---SNTIVTNTC 517 (570)
Q Consensus 482 W~~~s~~~~~-------~~~-~~~~~~~~cld~~~---~~~~~~~~c 517 (570)
|.+.++.... ... .....+++|||+.+ .++|+.+.|
T Consensus 90 W~~~~~~~~~~~~~~~~~~~~i~n~~sg~CLdv~g~~~~~~v~~~~C 136 (150)
T d1vcla1 90 WRQGRRKTFTDNGGIEQVATEIINLASGKCLDIEGSDGTGDIGVYDC 136 (150)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTTCCEEEESSSSSCSBEEEECC
T ss_pred EEEcCCCcccccccccccceEEEECCCCCEEeeccCCCCccEEEEeC
Confidence 9986543211 111 12346789999963 336776765
|
| >d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.53 E-value=4.6e-07 Score=94.46 Aligned_cols=106 Identities=16% Similarity=0.227 Sum_probs=80.9
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|+.|+.++|.-+.++ +.-.|...++.++++|+++.++||.
T Consensus 52 y~eDi~ll~~lG~~~yRfSisWsRI~P~---------------------------~g~~n~~gl~~Y~~~i~~l~~~gI~ 104 (423)
T d1vffa1 52 YRDDIQLMTSLGYNAYRFSIEWSRLFPE---------------------------ENKFNEDAFMKYREIIDLLLTRGIT 104 (423)
T ss_dssp HHHHHHHHHHHTCCEEEEECCHHHHCSB---------------------------TTBCCHHHHHHHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHhCCCEEEecCcHHHeecC---------------------------CCccChHHHHHHHHHHHHHHhcCCe
Confidence 5899999999999999999999766552 1224667899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRG 218 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~ 218 (570)
.||.+|+.. |.|... ..||.+.. ..+.|.++-+.++++| +. |--+=.+|||..
T Consensus 105 P~VTL~H~d~P~~l~~---~gGw~~~~--~v~~F~~Ya~~~~~~~-d~--Vk~W~T~NEP~~ 158 (423)
T d1vffa1 105 PLVTLHHFTSPLWFMK---KGGFLREE--NLKHWEKYIEKVAELL-EK--VKLVATFNEPMV 158 (423)
T ss_dssp EEEEEESSCCBHHHHH---TTGGGSGG--GHHHHHHHHHHHHHHT-TT--CCEEEEEECHHH
T ss_pred eEEeecCCcchHHHHh---hhhccCHH--HHHHHHHHHHHHHHhh-cc--cceeeccCCcce
Confidence 999997754 555422 12555433 4788999888888777 33 444669999964
|
| >d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
Probab=98.53 E-value=5.2e-07 Score=89.72 Aligned_cols=207 Identities=15% Similarity=0.201 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHhcCCCEEEE---ecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 141 IKAFQAVVASLGNNNVMVIL---DNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VIL---D~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
++.+|++|++|.++||.|.- =.|...|.|..... +.....+.+.++.+.+++||++. |-.+|+.|||.
T Consensus 60 ~~~~D~~v~~a~~~gl~v~gH~lvW~~~~P~w~~~~~-------~~~~~~~~~~~~I~~v~~rY~g~--i~~WDVvNEp~ 130 (301)
T d1ta3b_ 60 WSGADYLVDYATQHNKKVRGHTLVWHSQLPSWVSSIG-------DANTLRSVMTNHINEVVGRYKGK--IMHWDVVNEIF 130 (301)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSSSCCHHHHTCC-------CHHHHHHHHHHHHHHHHHHTTTS--CSEEEEEESCB
T ss_pred cHHHHHHHHHHHHCCCEEEEeccccCccCchhhhccc-------cHHHHHHHHHHHHHHHHHhcCCC--cceEEeecccc
Confidence 46789999999999998653 23444455533211 11112355778889999999986 66799999995
Q ss_pred CCCC--ChhHHH-----HHHHHHHHHHHhcCCCcEEEEeCCCC-CCcc-------hhhhhc-ccCcCCCCCEEEEEeecC
Q 008330 218 GPKQ--NVKDWY-----RYMQLGAEAVHAANPEVLVILSGLNF-DKDL-------SFVRNQ-AVNLTFTGKLVFEAHWYG 281 (570)
Q Consensus 218 ~~~~--~~~~W~-----~~~~~~~~aIr~~dp~~lIiVeG~~w-~~dl-------~~~~~~-p~~l~~~~nlVys~H~Y~ 281 (570)
.... ....|. .++..+.+++|+++|+..+++...+- +... ..+..- .-..++ +.+-+..|+..
T Consensus 131 ~~~~~~~~~~~~~~~g~~~~~~af~~A~~~dP~a~l~~nd~~~~~~~~~~~~~~~~~v~~l~~~g~~i-dgIG~Q~H~~~ 209 (301)
T d1ta3b_ 131 NEDGTFRNSVFYNLLGEDFVRIAFETARAADPDAKLYINDYNLDSASYAKTQAMASYVKKWLAEGVPI-DGIGSQAHYSS 209 (301)
T ss_dssp CTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEEEESCCCCTTSHHHHHHHHHHHHHHHTTCCC-CEEEECCEECT
T ss_pred cCCCCcccchhhhccchHHHHHHHHHHHHhCcCceeeeccccccccchHHHHHHHHHHHHHHhCCCCc-ceeeeeeecCC
Confidence 4321 112343 47788889999999998888865431 1111 011110 001122 45677777654
Q ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCC-eEEeccccCCCCCCcchHHHHHHHHHHHHHC-CC-ceEEeccC
Q 008330 282 FTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWP-LFVSEFGADLRGNNVNDNRYLNCFFGVAAEL-DW-DWALWTLV 358 (570)
Q Consensus 282 ~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~P-v~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~-gi-gw~~W~~~ 358 (570)
... ....+...+++ +.+.|.| |.|+||++... +..+++.++..+-++ .+ +.++|.+.
T Consensus 210 ~~~-----------~~~~~~~~l~~----~~~~g~~~i~iTE~dv~~~-----qa~~~~~~~~~~~~~p~v~gi~~Wg~~ 269 (301)
T d1ta3b_ 210 SHW-----------SSTEAAGALSS----LANTGVSEVAITELDIAGA-----ASSDYLNLLNACLNEQKCVGITVWGVS 269 (301)
T ss_dssp TCC-----------CGGGHHHHHHH----HHTTCCSEEEEEEEEETTC-----CHHHHHHHHHHHHTCTTEEEEEESCSB
T ss_pred CCC-----------CHHHHHHHHHH----HHHcCCCcccccccccchH-----HHHHHHHHHHHHHcccCceEEEEcCCc
Confidence 221 12234444433 2346775 99999998753 234445566555443 33 56788765
Q ss_pred ceeecccCccCCCceee-eecCCCCC
Q 008330 359 GSYYLREGVIGLNEYYG-LFDWNWCD 383 (570)
Q Consensus 359 G~y~~r~~~~~~~et~G-ll~~dw~~ 383 (570)
..|-.| .+.++ |++.|++.
T Consensus 270 D~~~w~------~~~~~lL~d~d~~p 289 (301)
T d1ta3b_ 270 DKDSWR------ASDSPLLFDGNYQP 289 (301)
T ss_dssp GGGSTT------GGGCCSSBCTTSCB
T ss_pred cCCCCC------CCCCCCcCCCCCCC
Confidence 322111 23344 45777643
|
| >d1xhba1 b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.51 E-value=6.1e-08 Score=84.63 Aligned_cols=98 Identities=20% Similarity=0.412 Sum_probs=72.6
Q ss_pred eeeCCCCceeeeecCC--CCceecCCCCCC---CCccccCCcceeecccceEEeeccCCccceeccccC--CCCCceeEe
Q 008330 413 VIYHPATGLCVQRKSF--LDPLTLGPCTES---EAWSYTPHKTISLKGAYFCLQAKHVGKPAKLGIICT--DCGSTWEII 485 (570)
Q Consensus 413 ~~~~~~tg~c~~~~~~--~~~~~~~~c~~~---~~W~~~~~~~~~~~~~~~cl~a~~~g~~~~~~~~c~--~~~~~W~~~ 485 (570)
.|....+|+|+++.+. ..++.+++|..+ +.|+++.++.|+ ..++||++.+.|.++.+ ..|. +++|+|...
T Consensus 11 ~Irn~~s~~CLd~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~--~~~~Cld~~~~~~~v~l-~~C~~~~~~Q~W~~~ 87 (131)
T d1xhba1 11 EIRNVETNQCLDNMARKENEKVGIFNCHGMGGNQVFSYTANKEIR--TDDLCLDVSKLNGPVTM-LKCHHLKGNQLWEYD 87 (131)
T ss_dssp CEEETTTCEEEECTTCCTTEECEEEECCSCCGGGCEEEETTSCEE--ETTEEEECCSTTCCCEE-EECCTTCGGGCEEEE
T ss_pred EEEECCCCccEecCCCCCCCeEEEEEcCCCCCceEEEEecCceEe--eCCEeeeccCCcccEEE-EEecCCCceEEEEEc
Confidence 6677889999998442 356899999874 589999998876 46799999988888877 6675 457999987
Q ss_pred eccccEEEEecCCCceEEEeecC--CC-ceeecce
Q 008330 486 SDSKMHLSSKADNGTTVCLDVDS--SN-TIVTNTC 517 (570)
Q Consensus 486 s~~~~~~~~~~~~~~~~cld~~~--~~-~~~~~~c 517 (570)
.+.. +|. ...+.+|||+.. ++ .++.+.|
T Consensus 88 ~~~~-~i~---~~~s~~CLd~~~~~~~~~l~~~~C 118 (131)
T d1xhba1 88 PVKL-TLQ---HVNSNQCLDKATEEDSQVPSIRDC 118 (131)
T ss_dssp TTTT-EEE---ESSSCEEEESCCSSSTTSCEEEEC
T ss_pred CCCc-eEE---CCCCCceEeCcccCCCceEEEeCC
Confidence 6654 232 235789999974 44 4444554
|
| >d1dqga_ b.42.2.2 (A:) Mannose receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Cysteine rich domain domain: Mannose receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.46 E-value=1.4e-07 Score=82.84 Aligned_cols=90 Identities=17% Similarity=0.324 Sum_probs=70.6
Q ss_pred ceeeCCCCceeeeecCCCCceecCCCCCC---CCccccCCcceeecccceEEeecc--CCccceeccccC--CCCCceeE
Q 008330 412 KVIYHPATGLCVQRKSFLDPLTLGPCTES---EAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICT--DCGSTWEI 484 (570)
Q Consensus 412 ~~~~~~~tg~c~~~~~~~~~~~~~~c~~~---~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~--~~~~~W~~ 484 (570)
..|+++.|++|+++.+. ..+.+++|+.+ +.|.++.++.|.-..+++||++.+ .|.++.+ ..|. +++|+|+.
T Consensus 5 f~I~n~~s~~CLd~~~~-~~v~l~~C~~~~~~Q~w~~~~~~~l~~~~s~~CL~~~~~~~g~~v~l-~~Cd~~~~~Q~W~~ 82 (134)
T d1dqga_ 5 FLIYNEDHKRCVDALSA-ISVQTATCNPEAESQKFRWVSDSQIMSVAFKLCLGVPSKTDWASVTL-YACDSKSEYQKWEC 82 (134)
T ss_dssp BCEEETTTTEEEEEEET-TEEEEESCCTTCGGGCEEESSSSCEEETTTTEEEECSSSCTTCBCEE-ECCCTTCTTSCEEE
T ss_pred EEEEECCCCCCEECCCC-CEEEEEeccCCCcceEEEEcCCCceEecCCCcEEeEeeccCCceEEE-EECCCCCccceeEe
Confidence 67999999999999655 45999999875 589999988888778999999865 4677777 8896 56899998
Q ss_pred eeccccEEEEecCCCceEEEeecC
Q 008330 485 ISDSKMHLSSKADNGTTVCLDVDS 508 (570)
Q Consensus 485 ~s~~~~~~~~~~~~~~~~cld~~~ 508 (570)
- ++.+ +.. .+..|||+...
T Consensus 83 ~-~~~l-~~~---~~~~l~l~~~~ 101 (134)
T d1dqga_ 83 K-NDTL-FGI---KGTELYFNYGN 101 (134)
T ss_dssp C-STTB-EEE---TTSSCEEECCG
T ss_pred C-CCeE-Eee---cCcceEEeecc
Confidence 4 4443 332 36889998853
|
| >d1ggpb1 b.42.2.1 (B:11-140) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]
Probab=98.43 E-value=8.2e-08 Score=83.38 Aligned_cols=91 Identities=21% Similarity=0.394 Sum_probs=66.2
Q ss_pred CceeeeecCC---CCceecCCCCCC--CCccccCCcceeecccceEEeecc-CCccceeccccCC-CCC--ceeEeeccc
Q 008330 419 TGLCVQRKSF---LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKH-VGKPAKLGIICTD-CGS--TWEIISDSK 489 (570)
Q Consensus 419 tg~c~~~~~~---~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~-~g~~~~~~~~c~~-~~~--~W~~~s~~~ 489 (570)
+|+|+++.+. ..++.+++|.++ +.|.++.++.|+ ..++||++.+ .|.++.+ +.|.+ .+| +|++.+++.
T Consensus 12 ~G~CLDv~g~~~~G~~v~l~~C~g~~nQ~w~~~~~g~ir--~~g~CLd~~~~~g~~V~l-~~C~~~~~q~~~W~~~~~g~ 88 (126)
T d1ggpb1 12 DGFCADVNGEGQNGAAIILKKCAENDNQLWTLKREATIR--SNGGCLTTAAAEQAKAGI-YDCTQATAELSAWEIADNGT 88 (126)
T ss_dssp GGEEEEESSSCCSSCBEEEEECCCCTTTEEEEETTSCCB--SSSSEEEEECSSSCEEEE-ECTTTSCHHHHCCEECTTSC
T ss_pred CCeEEecCCCCCCCCEEEEEccCCCCcccEEEccceEEE--ecceEeeeccCCCccEEE-EecCCCCcccEEEEEcCCCc
Confidence 5999998543 256999999986 699999988775 5789999876 5677666 99983 334 898877765
Q ss_pred cEEEEecCCCceEEEeecC--CC-ceeecce
Q 008330 490 MHLSSKADNGTTVCLDVDS--SN-TIVTNTC 517 (570)
Q Consensus 490 ~~~~~~~~~~~~~cld~~~--~~-~~~~~~c 517 (570)
|.. ..+++|||+.+ +| .++.+.|
T Consensus 89 --i~n---~~sg~cLd~~~~~~g~~l~~~~~ 114 (126)
T d1ggpb1 89 --IIN---PASSLVLSSGAANSLLDLGVQTN 114 (126)
T ss_dssp --EEE---TTTTEEEECSSSCTTEECEEECC
T ss_pred --EEc---cccceeEEecCCCCCceEEEEeC
Confidence 322 35789999963 55 4444444
|
| >d2aaib2 b.42.2.1 (B:136-262) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Castor bean (Ricinus communis), Ricin [TaxId: 3988]
Probab=98.41 E-value=1.8e-07 Score=80.99 Aligned_cols=104 Identities=23% Similarity=0.471 Sum_probs=75.5
Q ss_pred CCCceeeeecCCCCceecCCCCCC---CCccccCCcceeec-ccceEEeeccC--CccceeccccC--CCCCceeEeecc
Q 008330 417 PATGLCVQRKSFLDPLTLGPCTES---EAWSYTPHKTISLK-GAYFCLQAKHV--GKPAKLGIICT--DCGSTWEIISDS 488 (570)
Q Consensus 417 ~~tg~c~~~~~~~~~~~~~~c~~~---~~W~~~~~~~~~~~-~~~~cl~a~~~--g~~~~~~~~c~--~~~~~W~~~s~~ 488 (570)
-.+|+|+++.+ .++.+.+|+++ ++|.+++++.|++. ...+||++.+. |.++.+ ..|. +.+|+|++.+++
T Consensus 11 g~s~lCLd~~G--~~v~l~~C~~~~~nQ~W~~~~~g~ir~~~~~~~CL~~~~~~~g~~v~~-~~C~~~~~~q~W~~~~~g 87 (127)
T d2aaib2 11 GLYGLCLQANS--GQVWIEDCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKI-LSCGPASSGQRWMFKNDG 87 (127)
T ss_dssp CGGGCEEEEET--TEEEEECCCTTSSCCCEEECTTSCEEETTSTTEEEEECCSSCSSCEEE-EESTTCCTTSCCEECTTS
T ss_pred ecCCcCCccCC--CeEEEEecCCCCcceEEEECCCCcEEEcccccccccccccCCCccEEE-EecCCCCCcceeEEecCc
Confidence 34899999855 45899999764 79999999988763 35799999874 666666 8896 567999987665
Q ss_pred ccEEEEecCCCceEEEeecC---CC-ceeecceeeeCCCCCCCccCceEEE
Q 008330 489 KMHLSSKADNGTTVCLDVDS---SN-TIVTNTCKCLSRDKTCDPASQWFKL 535 (570)
Q Consensus 489 ~~~~~~~~~~~~~~cld~~~---~~-~~~~~~c~c~~~~~~~~~~~~~~~~ 535 (570)
.+ . ...+++|||+.+ ++ .++.+.|. + .|..|||-|
T Consensus 88 ~i--~---~~~sg~CLdv~g~~~~g~~v~~~~C~---g----~~~Q~W~~~ 126 (127)
T d2aaib2 88 TI--L---NLYSGLVLDVRASDPSLKQIILYPLH---G----DPNQIWLPL 126 (127)
T ss_dssp CE--E---CTTTCCEEEEGGGCGGGCCEEEECCC---C----CGGGCCEEE
T ss_pred eE--E---eeccCceEEecCCCCCCCEEEEEeCC---C----CccceeEEC
Confidence 53 2 236789999962 33 56667652 1 367899855
|
| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Cellvibrio mixtus [TaxId: 39650]
Probab=98.40 E-value=3.7e-06 Score=85.26 Aligned_cols=218 Identities=16% Similarity=0.216 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHhcCCCEE---EEecCCCCCCccccCCCCCCCCCCCCCCHH----HHHHHHHHHHHHhCCCCcEEEEecc
Q 008330 141 IKAFQAVVASLGNNNVMV---ILDNHISKPGWCCSNSDGNGFFGDQYFNPD----LWIKGLTKMATIFNGVRNVVGMSLR 213 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~V---ILD~H~~~~~w~~~~~dgng~~~d~~~~~~----~~~~~w~~iA~ryk~~p~Vig~dL~ 213 (570)
++..|++|++|.++||.| .|=.|...|.|.-...++. ..+++ .+.+..+.|++||++. |..+|+.
T Consensus 59 ~~~~D~~v~~a~~~gi~vrGH~LvW~~~~P~w~~~~~~~~------~~~~~~l~~~~~~~I~~v~~ry~g~--i~~WDVv 130 (350)
T d1ur1a_ 59 WKDADAFVAFGTKHNLHMVGHTLVWHSQIHDEVFKNADGS------YISKAALQKKMEEHITTLAGRYKGK--LAAWDVV 130 (350)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSSSSCGGGTBCTTSC------BCCHHHHHHHHHHHHHHHHHHTTTT--CSEEEEE
T ss_pred hHHHHHHHHHHHHCCCEEEEEEEEEcccccccccccCCcc------ccCHHHHHHHHHHHHHHHHHhcCCc--ceEEEEe
Confidence 467999999999999987 4668877777743322221 13333 3456777899999886 6789999
Q ss_pred CCCCCCCC--ChhHHH-----HHHHHHHHHHHhcCCCcEEEEeCCCCCCc---------chhhhhcccCcCCCCCEEEEE
Q 008330 214 NELRGPKQ--NVKDWY-----RYMQLGAEAVHAANPEVLVILSGLNFDKD---------LSFVRNQAVNLTFTGKLVFEA 277 (570)
Q Consensus 214 NEP~~~~~--~~~~W~-----~~~~~~~~aIr~~dp~~lIiVeG~~w~~d---------l~~~~~~p~~l~~~~nlVys~ 277 (570)
|||..... ....|+ .|+.++.++.|+++|+..+++-..+-... +..+....+ ++ +-+=+-.
T Consensus 131 NE~~~~~~~~~~~~~~~~~G~~~i~~af~~Ar~~dP~akL~~Ndyn~~~~~k~~~~~~lv~~l~~~Gv--pi-DgIGlQ~ 207 (350)
T d1ur1a_ 131 NEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANEVDPKAHLMYNDYNIERTGKREATVEMIERLQKRGM--PI-HGLGIQG 207 (350)
T ss_dssp ECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEEEESSTTSTTHHHHHHHHHHHHHHTTC--CC-CEEEECC
T ss_pred cccccCCCCcccchhhhhcCcHHHHHHHHHHHhhCCCceEeecccccccccccHHHHHHHHHHHhCCC--Cc-eEEEEee
Confidence 99965321 112354 36688889999999999999864331110 011111111 22 3455566
Q ss_pred eecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCC--------------------------
Q 008330 278 HWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNN-------------------------- 331 (570)
Q Consensus 278 H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~-------------------------- 331 (570)
|++.... ..+.+.+.+++ +.+.|.||.|+||.+......
T Consensus 208 H~~~~~~-----------~~~~i~~~l~~----~~~lg~~i~iTElDv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (350)
T d1ur1a_ 208 HLGIDTP-----------PIAEIEKSIIA----FAKLGLRVHFTSLDVDVLPSVWELPVAEVSTRFEYKPERDPYTKGLP 272 (350)
T ss_dssp EEESSCS-----------CHHHHHHHHHH----HHTTTCEEEEEEEEEECSCCCCC----CTTTTTSCCGGGCTTTTCCC
T ss_pred eccCCCC-----------CHHHHHHHHHH----HHhcCCceeecccceeccccccccccccccchhhcccccCccccCCc
Confidence 8754221 12344444443 455889999999987432110
Q ss_pred ----cchHHHHHHHHHHHHHC--CC-ceEEeccCceeecccCcc--CCCceeeeecCCCCCc
Q 008330 332 ----VNDNRYLNCFFGVAAEL--DW-DWALWTLVGSYYLREGVI--GLNEYYGLFDWNWCDI 384 (570)
Q Consensus 332 ----~~~~~~~~~~~~~~~~~--gi-gw~~W~~~G~y~~r~~~~--~~~et~Gll~~dw~~~ 384 (570)
....+.++.++..+.++ .+ +.++|.+...|-.+.+.+ +..+.-+|++.|+..-
T Consensus 273 ~e~~~~qA~~y~~~~~~~~~~~~~v~~it~Wg~~D~~sW~~~~~~~~~~~~plL~d~d~~pK 334 (350)
T d1ur1a_ 273 QEMQDKLAKRYEDLFKLFIKHSDKIDRATFWGVSDDASWLNGFPIPGRTNYPLLFDRKLQPK 334 (350)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTEEEEEESCSBGGGCGGGTSSSTTCCCCCSSBCTTSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeeEEEEECCccCcccccCCCCCCCCCCCCCCCCCCCCC
Confidence 01235566666666664 24 688999886554443322 2334445778776543
|
| >d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Thermoascus aurantiacus [TaxId: 5087]
Probab=98.38 E-value=1.7e-06 Score=86.00 Aligned_cols=204 Identities=16% Similarity=0.193 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHhcCCCEEE---EecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 141 IKAFQAVVASLGNNNVMVI---LDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VI---LD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
++..|++|++|.++||.|. |=.|...|.|-.... +.....+.+.++.+.|++||++. |..+|+.|||.
T Consensus 63 ~~~~D~~v~~a~~~gi~vrGH~lvW~~~~P~W~~~~~-------~~~~~~~~~~~~i~~v~~rY~g~--i~~WdVvNE~~ 133 (303)
T d1i1wa_ 63 FAGADYLVNWAQQNGKLIRGHTLVWHSQLPSWVSSIT-------DKNTLTNVMKNHITTLMTRYKGK--IRAWDVVNEAF 133 (303)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEEECSTTCCHHHHTCC-------CHHHHHHHHHHHHHHHHHHTTTS--CSEEEEEESCB
T ss_pred hHHHHHHHHHHHHCCCEEEEeeeeecCcCchhhhccc-------ccHHHHHHHHHHHHHHHHHcCCC--Cchhhhccccc
Confidence 5789999999999999984 555666666642211 11111345567888899999986 77899999996
Q ss_pred CCCC--ChhHHH-----HHHHHHHHHHHhcCCCcEEEEeCCCCCCcc-----------hhhhhcccCcCCCCCEEEEEee
Q 008330 218 GPKQ--NVKDWY-----RYMQLGAEAVHAANPEVLVILSGLNFDKDL-----------SFVRNQAVNLTFTGKLVFEAHW 279 (570)
Q Consensus 218 ~~~~--~~~~W~-----~~~~~~~~aIr~~dp~~lIiVeG~~w~~dl-----------~~~~~~p~~l~~~~nlVys~H~ 279 (570)
.... ....|. .++..+.+..|+++|+..+++.+.+--..- ..+....+ ++ +-+=+..|+
T Consensus 134 ~~~~~~r~~~~~~~~g~d~i~~af~~Ar~~dP~a~L~~Ndy~~~~~~~~k~~~~~~~v~~l~~~g~--~i-DgiG~Q~H~ 210 (303)
T d1i1wa_ 134 NEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYINDYNLDSASYPKTQAIVNRVKKWRAAGV--PI-DGIGSQTHL 210 (303)
T ss_dssp CTTSSBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEEEEESSCCCSSSHHHHHHHHHHHHHHHTTC--CC-CEEEECCEE
T ss_pred CCCcccccCchhhcccHHHHHHHHHHHHHhCCCCEEEeecCcccCCcHHHHHHHHHHHHHHHhCCC--Cc-cceEeeecc
Confidence 4321 113344 356888899999999999999876532110 01111111 12 233333443
Q ss_pred cCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCC-CeEEeccccCCCCCCcchHHHHHHHHHHHHHCC--CceEEec
Q 008330 280 YGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGW-PLFVSEFGADLRGNNVNDNRYLNCFFGVAAELD--WDWALWT 356 (570)
Q Consensus 280 Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~-Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~~g--igw~~W~ 356 (570)
-.. ....+.+.+.+ +.+.+. ||.|+|+.+... +...++.++..+-++. .+.++|.
T Consensus 211 ~~~-------------~~~~~~~~~~~----~~~~g~~~i~iTElDi~~~-----qa~~y~~~~~~~~~~p~v~git~Wg 268 (303)
T d1i1wa_ 211 SAG-------------QGASVLQALPL----LASAGTPEVAITELDVAGA-----SSTDYVNVVNACLNVSSCVGITVWG 268 (303)
T ss_dssp CTT-------------THHHHHHHHHH----HHTTCCSEEEEEEEEETTC-----CHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCC-------------CcHHHHHHHHH----HHHcCCCceeecccccccc-----cHHHHHHHHHHHhccCCceEEEEeC
Confidence 211 11233333322 234555 699999998753 2344566666665543 3567888
Q ss_pred cCceeecccCccCCCceeeeecCCCCC
Q 008330 357 LVGSYYLREGVIGLNEYYGLFDWNWCD 383 (570)
Q Consensus 357 ~~G~y~~r~~~~~~~et~Gll~~dw~~ 383 (570)
+...+..|. ++..+|++.|+..
T Consensus 269 ~~D~~sW~~-----~~~~lL~d~d~~p 290 (303)
T d1i1wa_ 269 VADPDSWRA-----STTPLLFDGNFNP 290 (303)
T ss_dssp SBGGGSTTG-----GGCCSSBCTTSCB
T ss_pred CccCCCcCC-----CCCCccCCCCCCC
Confidence 763322221 2223466878743
|
| >d1hwmb2 b.42.2.1 (B:136-266) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Sambucus ebulus, ebulin [TaxId: 28503]
Probab=98.36 E-value=1.9e-07 Score=81.48 Aligned_cols=103 Identities=17% Similarity=0.372 Sum_probs=76.2
Q ss_pred CCceeeeecCCCCceecCCCCCC---CCccccCCcceeec-ccceEEeeccC--CccceeccccC-CCCCceeEeecccc
Q 008330 418 ATGLCVQRKSFLDPLTLGPCTES---EAWSYTPHKTISLK-GAYFCLQAKHV--GKPAKLGIICT-DCGSTWEIISDSKM 490 (570)
Q Consensus 418 ~tg~c~~~~~~~~~~~~~~c~~~---~~W~~~~~~~~~~~-~~~~cl~a~~~--g~~~~~~~~c~-~~~~~W~~~s~~~~ 490 (570)
.+++|+++.+...++.+.+|+.+ ++|.+++++.|++. .+.+||++.+. |.++.+ ..|. +.+|+|++.+++.+
T Consensus 12 ~~~lCLd~~g~~~~v~l~~C~~~~~~Q~W~l~~~g~i~~~~~~~lCl~~~~~~~g~~v~l-~~C~~~~~q~W~~~~~g~i 90 (131)
T d1hwmb2 12 YNEMCLQANGENNNVWMEDCDVTSVQQQWALFDDRTIRVNNSRGLCVTSNGYVSKDLIVI-RKCQGLATQRWFFNSDGSV 90 (131)
T ss_dssp TTTEEEEEETTTTEEEEEECCTTCGGGCEEECTTSCEEETTEEEEEEEESCSSTTEEEEE-EECCCCGGGCCEECTTSCE
T ss_pred eCCcCCCcCCCCceEEEEecCCCChheEEEEcCCCcEEeccCcceEEeccccCCCCEEEE-EEcCCCcceEEEEeCCCeE
Confidence 47999999654466999999874 68999999988763 46789998874 555666 9999 77899999877764
Q ss_pred EEEEecCCCceEEEeecC---C-CceeecceeeeCCCCCCCccCceE
Q 008330 491 HLSSKADNGTTVCLDVDS---S-NTIVTNTCKCLSRDKTCDPASQWF 533 (570)
Q Consensus 491 ~~~~~~~~~~~~cld~~~---~-~~~~~~~c~c~~~~~~~~~~~~~~ 533 (570)
. ...+.+|||+.+ + ..++.+.| +. .|..||.
T Consensus 91 --~---~~~s~~CLdv~g~~~~g~~v~~~~C-----~~--~~~Q~W~ 125 (131)
T d1hwmb2 91 --V---NLKSTRVMDVKESDVSLQEVIIFPA-----TG--NPNQQWR 125 (131)
T ss_dssp --E---ETTTTEEEEECTTCSSSCBEEEECC-----CC--CGGGCEE
T ss_pred --E---eccCCeEEEecCCCCCCCEEEEECC-----CC--CcccceE
Confidence 2 235789999963 3 36777877 12 2556785
|
| >d1m2tb2 b.42.2.1 (B:385-510) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: European mistletoe (Viscum album) [TaxId: 3972]
Probab=98.36 E-value=2.3e-07 Score=80.35 Aligned_cols=100 Identities=18% Similarity=0.432 Sum_probs=72.3
Q ss_pred CceeeeecCCCCceecCCCCCC---CCccccCCcceeec-ccceEEeeccC--CccceeccccC--CCCCceeEeecccc
Q 008330 419 TGLCVQRKSFLDPLTLGPCTES---EAWSYTPHKTISLK-GAYFCLQAKHV--GKPAKLGIICT--DCGSTWEIISDSKM 490 (570)
Q Consensus 419 tg~c~~~~~~~~~~~~~~c~~~---~~W~~~~~~~~~~~-~~~~cl~a~~~--g~~~~~~~~c~--~~~~~W~~~s~~~~ 490 (570)
+++|+++.+. .+.+.+|..+ ++|++++++.|+.. .+++||++.+. |.++.+ ..|. +++|+|++-+++.+
T Consensus 12 ~~lCLda~G~--~v~l~~C~~~~~~Q~W~l~~~g~ir~~~~~~~CL~~~~~~~g~~v~l-~~C~~g~~~Q~W~~~~~g~i 88 (126)
T d1m2tb2 12 RDLCMESAGG--SVYVETCTAGQENQRWALYGDGSIRPKQLQSQCLTNGRDSISTVINI-VSCSAGSSGQRWVFTNEGAI 88 (126)
T ss_dssp GGCEEEEETT--EEEEECCCTTCGGGCEEECTTSCEEETTCTTEEEECSSCSTTCBCEE-EESTTCCGGGCEEECTTSCE
T ss_pred cccCCccCCC--eEEEEecCCCCcceEEEEcCCCcEEeccCcceeeeecCCCCCCeEEE-EeecCCCccceEEEecCceE
Confidence 7889998653 4899999653 69999999988764 36799998874 566777 6674 56899999887763
Q ss_pred EEEEecCCCceEEEeecC---CC-ceeecceeeeCCCCCCCccCceE
Q 008330 491 HLSSKADNGTTVCLDVDS---SN-TIVTNTCKCLSRDKTCDPASQWF 533 (570)
Q Consensus 491 ~~~~~~~~~~~~cld~~~---~~-~~~~~~c~c~~~~~~~~~~~~~~ 533 (570)
.. ..+++|||+.+ ++ .|+.+.|. . .|..||+
T Consensus 89 --~n---~~sg~cLDv~g~~~~g~~v~~~~c~--g-----~~nQ~W~ 123 (126)
T d1m2tb2 89 --LN---LKNGLAMDVAQANPSLQRIIIYPAT--G-----NPNQMWL 123 (126)
T ss_dssp --EE---TTTCCEEEEGGGCGGGCCEEEECCC--C-----CGGGCCE
T ss_pred --Ee---cCCCceEeccCCCCCCCeEEEEcCC--C-----ChhhcEE
Confidence 22 25789999963 33 66667763 1 2456775
|
| >d1abrb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Abrus precatorius [TaxId: 3816]
Probab=98.35 E-value=1.8e-07 Score=81.08 Aligned_cols=103 Identities=21% Similarity=0.425 Sum_probs=73.6
Q ss_pred CCceeeeecCCCCceecCCCCCC---CCccccCCcceeec-ccceEEeeccC--Cccceecccc-C-CCCCceeEeeccc
Q 008330 418 ATGLCVQRKSFLDPLTLGPCTES---EAWSYTPHKTISLK-GAYFCLQAKHV--GKPAKLGIIC-T-DCGSTWEIISDSK 489 (570)
Q Consensus 418 ~tg~c~~~~~~~~~~~~~~c~~~---~~W~~~~~~~~~~~-~~~~cl~a~~~--g~~~~~~~~c-~-~~~~~W~~~s~~~ 489 (570)
.+|+|+++.+ +++.+++|+++ +.|.+++++.|++. .+++||++.+. |.++.+ ..| . +++|+|.+..++.
T Consensus 12 ~s~lCld~~G--~~v~l~~C~~~~~nQ~w~~~~~g~i~~~~~~~~CLd~~~~~~g~~v~l-~~c~~~~~~q~W~~~~~g~ 88 (127)
T d1abrb2 12 YSDLCMQAQG--SNVWMADCDSNKKEQQWALYTDGSIRSVQNTNNCLTSKDHKQGSTILL-MGCSNGWASQRWVFKNDGS 88 (127)
T ss_dssp GGGCEEEEET--TEEEEECCCTTCGGGCEEECTTSCEEETTEEEEEEEESSSSTTCBEEE-EESTTCCGGGCCEECTTSC
T ss_pred cCCcCCccCC--ceEEEEeCCCCCceEEEEecCCceEEEcCCccEEEeecccCCCceEEE-EeccCCCCceEEEEeeceE
Confidence 4899999865 45999999764 68999999987763 46899998764 566667 455 4 6789999977665
Q ss_pred cEEEEecCCCceEEEeecC---CC-ceeecceeeeCCCCCCCccCceEEE
Q 008330 490 MHLSSKADNGTTVCLDVDS---SN-TIVTNTCKCLSRDKTCDPASQWFKL 535 (570)
Q Consensus 490 ~~~~~~~~~~~~~cld~~~---~~-~~~~~~c~c~~~~~~~~~~~~~~~~ 535 (570)
|... .+.+|||+.. +| .|+.+.|.- .+..||.=|
T Consensus 89 --i~~~---~s~~CLdv~g~~~~g~~v~~~~C~g-------~~nQ~W~~~ 126 (127)
T d1abrb2 89 --IYSL---YDDMVMDVKGSDPSLKQIILWPYTG-------KPNQIWLTL 126 (127)
T ss_dssp --EEET---TTTEEEEEGGGCGGGCCEEEECCCC-------CGGGCCEEC
T ss_pred --EEec---CCCceEEcccCCCCCCEEEEEcCCC-------CccceeEEc
Confidence 3323 4679999962 44 555576641 466788643
|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Xt6 [TaxId: 1422]
Probab=98.29 E-value=6.5e-06 Score=84.07 Aligned_cols=201 Identities=12% Similarity=0.214 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHhcCCCEEE---EecCCCCCCccccCCCCCCCCCCC-----CCCH----HHHHHHHHHHHHHhCCCCcEE
Q 008330 141 IKAFQAVVASLGNNNVMVI---LDNHISKPGWCCSNSDGNGFFGDQ-----YFNP----DLWIKGLTKMATIFNGVRNVV 208 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VI---LD~H~~~~~w~~~~~dgng~~~d~-----~~~~----~~~~~~w~~iA~ryk~~p~Vi 208 (570)
++..|++|++|.++||.|- |=.|...|.|.....++..+.... ..++ +.+.++.+.|++||++. |.
T Consensus 67 ~~~aD~~v~~a~~ngi~vrGH~LvW~~~~P~W~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~I~~v~~rY~g~--I~ 144 (371)
T d1r85a_ 67 FEQADRIVKFAKANGMDIRFHTLVWHSQVPQWFFLDKEGKPMVNETDPVKREQNKQLLLKRLETHIKTIVERYKDD--IK 144 (371)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSCCSTTCCGGGGBCTTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--CC
T ss_pred cHHHHHHHHHHHHCCCEEEEeEEEeecccccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHcCCC--ce
Confidence 4679999999999999993 556766677753322322221111 0112 23456778999999986 77
Q ss_pred EEeccCCCCCCCC--ChhHHH-----HHHHHHHHHHHhc-CCCcEEEEeCCC--CCCc----c---hhhhhcccCcCCCC
Q 008330 209 GMSLRNELRGPKQ--NVKDWY-----RYMQLGAEAVHAA-NPEVLVILSGLN--FDKD----L---SFVRNQAVNLTFTG 271 (570)
Q Consensus 209 g~dL~NEP~~~~~--~~~~W~-----~~~~~~~~aIr~~-dp~~lIiVeG~~--w~~d----l---~~~~~~p~~l~~~~ 271 (570)
.+|+.|||..... ....|+ .|+..+....|++ +|...+++...+ .+.. + ..+....+ +. +
T Consensus 145 ~WDVvNE~~~~~~~~r~~~~~~~~g~dyi~~af~~A~~~~~p~~~L~~Ndy~~~~~~k~~~~~~~v~~l~~~g~--pi-d 221 (371)
T d1r85a_ 145 YWDVVNEVVGDDGKLRNSPWYQIAGIDYIKVAFQAARKYGGDNIKLYMNDYNTEVEPKRTALYNLVKQLKEEGV--PI-D 221 (371)
T ss_dssp EEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHHCTTSEEEEEESCTTSTTHHHHHHHHHHHHHHTTC--CC-C
T ss_pred EEEEEeecccCCCCcccCchhhccCcHHHHHHHHHHHHhcCCcceeeeccccccccchhHHHHHHHHHHHHCCC--Cc-c
Confidence 8999999965321 112354 3567788888886 677777775322 1110 0 11111111 22 3
Q ss_pred CEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCc---------------chHH
Q 008330 272 KLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNV---------------NDNR 336 (570)
Q Consensus 272 nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~---------------~~~~ 336 (570)
.+=+..|+..... ..+.+.+.+++ +.+.|.||.|+||-+...+... ....
T Consensus 222 gIG~Q~H~~~~~~-----------~~~~i~~~l~~----~a~~Gl~i~ITElDV~~~~~~~~~~~~~~~~~~e~~~~QA~ 286 (371)
T d1r85a_ 222 GIGHQSHIQIGWP-----------SEAEIEKTINM----FAALGLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAA 286 (371)
T ss_dssp EEEECCEECSSSS-----------CHHHHHHHHHH----HHHTTCEEEEEEEEECSSCSSCCCCSSGGGSCHHHHHHHHH
T ss_pred eeeccccccCCCC-----------CHHHHHHHHHH----HHHcCCceEEeeeEeccCCCccccCcccccccHHHHHHHHH
Confidence 4556667654211 12344444443 3457999999999875432210 1246
Q ss_pred HHHHHHHHHHHC--CC-ceEEeccCcee
Q 008330 337 YLNCFFGVAAEL--DW-DWALWTLVGSY 361 (570)
Q Consensus 337 ~~~~~~~~~~~~--gi-gw~~W~~~G~y 361 (570)
+++.++..+.++ .+ +.++|.+...|
T Consensus 287 ~y~~~~~~~~~~~p~v~git~WG~~D~~ 314 (371)
T d1r85a_ 287 RYDRLFKLYEKLSDKISNVTFWGIADNH 314 (371)
T ss_dssp HHHHHHHHHHHTGGGEEEEEESSSSTTS
T ss_pred HHHHHHHHHHhcCCCeeEEEEeCCCCCC
Confidence 667777777764 23 67889876443
|
| >d1hwmb1 b.42.2.1 (B:3-135) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Sambucus ebulus, ebulin [TaxId: 28503]
Probab=98.20 E-value=2.1e-06 Score=74.56 Aligned_cols=98 Identities=23% Similarity=0.489 Sum_probs=69.5
Q ss_pred cceeeCCCCceeeeecCC----CCceecCCCCCC--CCccccCCcceeecccceEEeecc--CCccceeccccC---CCC
Q 008330 411 HKVIYHPATGLCVQRKSF----LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICT---DCG 479 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~----~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~---~~~ 479 (570)
..++- -.+|+|+++.+. ..++.+++|.++ ++|.++.++.++ ...+||++.+ .|..+++ ..|. +.+
T Consensus 10 ~~~i~-~~sG~CLDv~g~~~~~g~~v~~~~C~g~~~Q~w~~~~~g~~~--~~~~~l~~~~~~~g~~v~~-~~c~~~~~~~ 85 (133)
T d1hwmb1 10 TRRIV-GRDGLCVDVRNGYDTDGTPIQLWPCGTQRNQQWTFYNDKTIR--SMGKCMTANGLNSGSYIMI-TDCSTAAEDA 85 (133)
T ss_dssp EEEEE-CGGGCEEEEGGGCCSTTCBEEEECCCCCGGGCEEECTTSCEE--ETTEEEEESSSSTTCBEEE-ECTTTSCTTS
T ss_pred eEEEE-ccCCcEEECCCCCCCCCCEEEEEccCCCccccEEEecCccEE--EeeeecccCCCCCCCeeEE-EecCCCCCce
Confidence 33444 369999998432 356999999986 699999988776 4678999876 4666666 5665 346
Q ss_pred CceeEeeccccEEEEecCCCceEEEeecC--CC-ceeecce
Q 008330 480 STWEIISDSKMHLSSKADNGTTVCLDVDS--SN-TIVTNTC 517 (570)
Q Consensus 480 ~~W~~~s~~~~~~~~~~~~~~~~cld~~~--~~-~~~~~~c 517 (570)
|+|++.+++. |. ...+.+|||+.+ ++ .++.+.|
T Consensus 86 q~w~~~~~g~--i~---~~~sg~cLd~~~~~~g~~v~~~~c 121 (133)
T d1hwmb1 86 TKWEVLIDGS--II---NPSSGLVMTAPSGASRTTLLLENN 121 (133)
T ss_dssp SCCEEETTTE--EE---CTTTCCEEECSCSSTTCBCEEECC
T ss_pred eEEEEcCCCC--EE---ccCCCeEeecccCCCCCEEEEEcC
Confidence 8999987664 32 335789999963 44 5666765
|
| >d1qxma1 b.42.2.1 (A:4-148) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=98.14 E-value=3.5e-06 Score=74.66 Aligned_cols=120 Identities=11% Similarity=0.132 Sum_probs=82.2
Q ss_pred ccceeeCCCCceeeeecCCCCceecCCCCCC--CCcccc--CC-c--ceeecccceEEeecc-CCccceeccccC-CCCC
Q 008330 410 LHKVIYHPATGLCVQRKSFLDPLTLGPCTES--EAWSYT--PH-K--TISLKGAYFCLQAKH-VGKPAKLGIICT-DCGS 480 (570)
Q Consensus 410 ~~~~~~~~~tg~c~~~~~~~~~~~~~~c~~~--~~W~~~--~~-~--~~~~~~~~~cl~a~~-~g~~~~~~~~c~-~~~~ 480 (570)
-|.|.....|++|+++.+. +.+++++|.++ ++|..+ .. + .|+-+.+++|+.+.. .|.++.+ .+|. +++|
T Consensus 11 ~y~i~~~~Ns~kvlD~~s~-t~Vq~w~~~g~~nQkW~~~~~~~~g~Y~I~~~~s~~~l~~~~~~g~~v~~-~~~~g~~~Q 88 (145)
T d1qxma1 11 VFFISPSNNTNKVLDKISQ-SEVKLWNKLSGANQKWRLIYDTNKQAYKIKVMDNTSLILTWNAPLSSVSV-KTDTNGDNQ 88 (145)
T ss_dssp EEEEEETTCTTEEEEECSS-SCEEEEECCCCGGGCEEEEEETTTTEEEEEESSSSCCEEEECTTSSCEEE-ECCCCCGGG
T ss_pred EEEEEECCCCCeEEEecCC-CEEEEEcCCCChhheEEEEEcCCCCEEEEEECCCCCEEEeccCCCceEEE-EcCCCCchh
Confidence 4567777889999998666 55999999997 699865 33 3 355556777766544 5777666 6677 8899
Q ss_pred ceeEee-ccccEEEEecCCCceEEEeecCCCceeecceeeeCCCCCCCccCceEEEEecc
Q 008330 481 TWEIIS-DSKMHLSSKADNGTTVCLDVDSSNTIVTNTCKCLSRDKTCDPASQWFKLVDST 539 (570)
Q Consensus 481 ~W~~~s-~~~~~~~~~~~~~~~~cld~~~~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~ 539 (570)
+|+++. .++.+...+....+.+|||+.+.++|+++.|.= . ..|=|||-.++
T Consensus 89 ~W~i~~~~~~g~y~I~n~~ns~~vLDv~gg~~v~~~~~~g--~------~nQ~w~~~~~~ 140 (145)
T d1qxma1 89 YWYLLQNYISRNVIIRNYMNPNLVLQYNIDDTLMVSTQTS--S------SNQFFKFSNCI 140 (145)
T ss_dssp CEEEEECTTTCCEEEEESSCTTEEEEECTTSCEEEEECCS--C------GGGCEEEEEHH
T ss_pred eEEEeecCCCCEEEEEEccCCCEEEEecCCceEEEeCCCC--C------cccEEEEecCc
Confidence 999863 344333333334578999998777888777652 1 24667776554
|
| >d1abrb1 b.42.2.1 (B:1-140) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Abrus precatorius [TaxId: 3816]
Probab=98.14 E-value=1.8e-06 Score=75.95 Aligned_cols=94 Identities=21% Similarity=0.402 Sum_probs=66.1
Q ss_pred CCCCceeeeecCC----CCceecCCCCCC----CCccccCCcceeecccceEEeecc--CCccceeccccC-CCCC--ce
Q 008330 416 HPATGLCVQRKSF----LDPLTLGPCTES----EAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICT-DCGS--TW 482 (570)
Q Consensus 416 ~~~tg~c~~~~~~----~~~~~~~~c~~~----~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~-~~~~--~W 482 (570)
--.+|+|+++.+. ..++.+++|.+. +.|.++..+.|+ ..++||++.+ .|.++.+ +.|. ..++ +|
T Consensus 19 ~~~sg~CLDv~~~~~~~G~~v~~~~C~g~~~~nq~w~~~~~g~ir--~~g~cld~~~~~~G~~v~~-~~C~~~~~q~~~~ 95 (140)
T d1abrb1 19 GGRDGMCVDVYDNGYHNGNRIIMWKCKDRLEENQLWTLKSDKTIR--SNGKCLTTYGYAPGSYVMI-YDCTSAVAEATYW 95 (140)
T ss_dssp ECGGGCEEEEGGGCCSTTCBEEEECCCSSCCGGGCEEECTTSBEE--ETTEEEEESCSSTTCBEEE-ECTTTSCGGGSBC
T ss_pred eCCCCeEEEcCCCCCCCCCEEEEEecCCCCCccEEEEECCCCeEE--EcCccccccCCCCCCEEEE-EecCCCCCcceEE
Confidence 3469999998442 367999999763 479999988775 5789999876 4566666 8999 4444 45
Q ss_pred eEeeccccEEEEecCCCceEEEeecC--CC-ceeecce
Q 008330 483 EIISDSKMHLSSKADNGTTVCLDVDS--SN-TIVTNTC 517 (570)
Q Consensus 483 ~~~s~~~~~~~~~~~~~~~~cld~~~--~~-~~~~~~c 517 (570)
+...++. |. ...+.+|||+.+ +| .++.+.|
T Consensus 96 ~~~~~g~--i~---n~~sg~cLd~~~~~~g~~v~~~~c 128 (140)
T d1abrb1 96 EIWDNGT--II---NPKSALVLSAESSSMGGTLTVQTN 128 (140)
T ss_dssp EECTTSC--EE---ETTTTEEEECCCSSTTCBCEEECC
T ss_pred EeccCce--EE---eceeeeEecccccCCCCEEEEEeC
Confidence 5555554 32 235789999974 55 5555776
|
| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Thioglucosidase species: Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]
Probab=98.12 E-value=1.2e-06 Score=92.36 Aligned_cols=108 Identities=11% Similarity=0.071 Sum_probs=83.7
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|+-|+.++|.-+.++. .+.-.+...++.++++|+.|.++||.
T Consensus 59 y~eDi~l~~~lG~~~yRfSi~WsRI~P~G-------------------------~~g~~n~~gl~~Y~~~i~~l~~~GI~ 113 (462)
T d1wcga1 59 YKEDVAIIKDLNLKFYRFSISWARIAPSG-------------------------VMNSLEPKGIAYYNNLINELIKNDII 113 (462)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSTTS-------------------------CTTSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHhCCCEEEeeCcHHHcccCC-------------------------CCCCcCHHHHHHHHHHHHHHHhcCCe
Confidence 68999999999999999999997665420 01224567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.||.+|+.. |.|... -.||-+ + ...+.|.++-+.++++|++.-. -+=.+|||.
T Consensus 114 P~vTL~Hfd~P~~l~~---~GGW~~-~-~~v~~F~~Ya~~v~~~fgd~V~--~W~T~NEP~ 167 (462)
T d1wcga1 114 PLVTMYHWDLPQYLQD---LGGWVN-P-IMSDYFKEYARVLFTYFGDRVK--WWITFNEPI 167 (462)
T ss_dssp EEEEEESSCCBHHHHH---TTGGGS-T-THHHHHHHHHHHHHHHHTTTCC--EEEEEECHH
T ss_pred eEEEeccccchhhhhh---cCCccc-H-HHHHHHHHHHHHHHHhccccch--heeeecCCc
Confidence 999998864 666432 225443 3 3478999999999999999733 356889985
|
| >d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Creeping white clover (Trifolium repens) [TaxId: 3899]
Probab=98.07 E-value=9.5e-07 Score=93.75 Aligned_cols=110 Identities=11% Similarity=-0.071 Sum_probs=83.7
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|+.|+.++|.-+.++ .+. +.-.|...++.++++|+.+.++||.
T Consensus 75 y~eDi~l~~~lG~~~yRfSi~WsRI~P~----g~~--------------------~g~~n~~gl~~Y~~~i~~l~~~GIe 130 (490)
T d1cbga_ 75 YKEDIGIMKDMNLDAYRFSISWPRVLPK----GKL--------------------SGGVNREGINYYNNLINEVLANGMQ 130 (490)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHSTT----SSG--------------------GGCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHcCCCEEEccCCHHHcCCC----CCC--------------------CCCCCHHHHHHHHHHHHHHHHhCCe
Confidence 6899999999999999999999776652 000 1123567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.||.+|+.. |.|... .-|+|.++ ...+.|.++-+.++++|++.-. -+=.+|||.
T Consensus 131 P~vTL~HfdlP~~l~~---~~Ggw~n~-~~~~~F~~Ya~~v~~~fgd~V~--~W~T~NEP~ 185 (490)
T d1cbga_ 131 PYVTLFHWDVPQALED---EYRGFLGR-NIVDDFRDYAELCFKEFGDRVK--HWITLNEPW 185 (490)
T ss_dssp EEEEEESSCCBHHHHH---HHCGGGST-THHHHHHHHHHHHHHHHTTTCC--EEEEEECHH
T ss_pred EEEEeecCCChHHHhh---cccccCCH-HHHHHHHHHHHHHHHHhcCccc--eEEEccCCc
Confidence 999998864 555321 11455444 3478999999999999999633 356889983
|
| >d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Pseudomonas fluorescens [TaxId: 294]
Probab=97.99 E-value=5.4e-05 Score=76.28 Aligned_cols=214 Identities=15% Similarity=0.184 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHhcCCCEEE---EecCCC--CCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCC
Q 008330 141 IKAFQAVVASLGNNNVMVI---LDNHIS--KPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNE 215 (570)
Q Consensus 141 l~~ld~vV~~a~~~Gl~VI---LD~H~~--~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NE 215 (570)
++..|++|++|.++||.|. |=.|.. .|.|... +...-.+.+.+..+.+++||++. |-.+|+.||
T Consensus 59 ~~~~D~~v~~a~~ng~~vrGH~LvW~~~~~~P~w~~~---------~~~~~~~~~~~~I~~v~~ry~g~--i~~WDVvNE 127 (346)
T d1w32a_ 59 FTNSDRLVSWAAQNGQTVHGHALVWHPSYQLPNWASD---------SNANFRQDFARHIDTVAAHFAGQ--VKSWDVVNE 127 (346)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECCCGGGCCTTCST---------TCTTHHHHHHHHHHHHHHHTTTT--CSEEEEEEC
T ss_pred chHHHHHHHHHHHCCCEEEEEeeecCCcccCcccccC---------CcHHHHHHHHHHHHHHHHhhCCc--ceEEEEEee
Confidence 4678999999999999984 445642 2555321 11112466778899999999987 668999999
Q ss_pred CCCCCC----------C--hhHHH------HHHHHHHHHHHhcCCCcEEEEeCCCCCCc-------ch---hhhhcccCc
Q 008330 216 LRGPKQ----------N--VKDWY------RYMQLGAEAVHAANPEVLVILSGLNFDKD-------LS---FVRNQAVNL 267 (570)
Q Consensus 216 P~~~~~----------~--~~~W~------~~~~~~~~aIr~~dp~~lIiVeG~~w~~d-------l~---~~~~~p~~l 267 (570)
|..... . ...|+ .|++++.+..|+++|+..+++-..+-..+ +. .+...-+
T Consensus 128 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~yi~~aF~~Ar~~dP~a~L~~Ndyn~~~~~~k~~~~~~lv~~L~~~g~-- 205 (346)
T d1w32a_ 128 ALFDSADDPDGRGSANGYRQSVFYRQFGGPEYIDEAFRRARAADPTAELYYNDFNTEENGAKTTALVNLVQRLLNNGV-- 205 (346)
T ss_dssp CBCCGGGCTTCCCEETTEECCHHHHHHTSTHHHHHHHHHHHHHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTC--
T ss_pred eccccccCccccccccccccchhhhhccChHHHHHHHHHHHHhCCCCEEEeccCCcccCcHHHHHHHHHHHHHHhcCC--
Confidence 964310 0 11232 46788999999999999999876441111 11 1111111
Q ss_pred CCCCCEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcC--CCeEEeccccCCCCC---------------
Q 008330 268 TFTGKLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQG--WPLFVSEFGADLRGN--------------- 330 (570)
Q Consensus 268 ~~~~nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g--~Pv~iGEFG~~~~~~--------------- 330 (570)
++ +-+=+-.|+.... + ..+.+.+.+++ +.+.| +||.|+||-+.....
T Consensus 206 pI-DgIG~Q~H~~~~~---------p--~~~~~~~~l~~----~~~~g~~l~v~ITElDV~~~~~~~~~~~~~~~~~~~~ 269 (346)
T d1w32a_ 206 PI-DGVGFQMHVMNDY---------P--SIANIRQAMQK----IVALSPTLKIKITELDVRLNNPYDGNSSNNYTNRNDC 269 (346)
T ss_dssp CC-CEEEECCEEESSS---------S--CHHHHHHHHHH----HHTTCSSCEEEEEEEEEESCCTTSSCSSSCCCSGGGG
T ss_pred cc-ceEEEEeeccCCC---------C--CHHHHHHHHHH----HHHhCCCceEEEEEEEeecCCcccccccccccccccc
Confidence 22 4566777764311 1 12344444443 23344 899999997532210
Q ss_pred ---C---cchHHHHHHHHHHHHH---C-CC-ceEEeccCceeecccCccCCCceeeeecCCCCC
Q 008330 331 ---N---VNDNRYLNCFFGVAAE---L-DW-DWALWTLVGSYYLREGVIGLNEYYGLFDWNWCD 383 (570)
Q Consensus 331 ---~---~~~~~~~~~~~~~~~~---~-gi-gw~~W~~~G~y~~r~~~~~~~et~Gll~~dw~~ 383 (570)
. .....+++.++..+.+ + .+ +-++|.+...|-.+.+..+..+.-.|++.++..
T Consensus 270 ~~~~~~~~~Qa~~y~~i~~~~~~~~~~~~~~git~Wg~~D~~sW~~~~~~~~~~plLfd~~~~p 333 (346)
T d1w32a_ 270 AVSCAGLDRQKARYKEIVQAYLEVVPPGRRGGITVWGIADPDSWLYTHQNLPDWPLLFNDNLQP 333 (346)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHSCTTCEEEEEESCSBGGGSTTSEETTEECCCSSBCTTSCB
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhccCccccEEEEeCCCcCCCcCCCCCCCCCCCccCCCCCCC
Confidence 0 0123455666665554 1 22 567898764443333222222222367777654
|
| >d2ihoa1 b.42.2.1 (A:2-155) Agglutinin MOA, N-terminal domain {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Agglutinin MOA, N-terminal domain species: Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]
Probab=97.99 E-value=4.4e-06 Score=74.18 Aligned_cols=107 Identities=15% Similarity=0.072 Sum_probs=73.7
Q ss_pred cceeeCCCCceeeeecCC----CCceecCCCCC-----CCCccccCCc------ceeecccceEEeeccC----Ccccee
Q 008330 411 HKVIYHPATGLCVQRKSF----LDPLTLGPCTE-----SEAWSYTPHK------TISLKGAYFCLQAKHV----GKPAKL 471 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~----~~~~~~~~c~~-----~~~W~~~~~~------~~~~~~~~~cl~a~~~----g~~~~~ 471 (570)
.+.|....||+|+++.+. ..+|.+++|++ +++|.+++.+ .|+-+.+++||++.+. |.++.+
T Consensus 6 ~Y~I~n~~s~~~ldv~~~~~~~G~~v~~w~~~~~~~~~nQ~W~~~~~~~~~~~y~i~n~~s~~~l~~~~~~~~~g~~v~~ 85 (154)
T d2ihoa1 6 IYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNG 85 (154)
T ss_dssp EEEEEESSSSCEEEEGGGCCSTTEEEEEECCCTTSCCTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCSTTEEEEE
T ss_pred EEEEEECCCCCEEEeCCCCCCCCCEEEEEecCCCCCCcceEEEEEecCCcCceEEEEEcCCCeEEeccCCcCCCCcEEEE
Confidence 356778899999999442 36799999976 4889996432 3555678999997774 444544
Q ss_pred ccc---cC-CCCCceeEeecccc---EEEEecCCCceEEEeecC----CC-ceeecceeeeC
Q 008330 472 GII---CT-DCGSTWEIISDSKM---HLSSKADNGTTVCLDVDS----SN-TIVTNTCKCLS 521 (570)
Q Consensus 472 ~~~---c~-~~~~~W~~~s~~~~---~~~~~~~~~~~~cld~~~----~~-~~~~~~c~c~~ 521 (570)
+. |+ .++|+|.+...+.. .|.. ..+.+|||+.+ +| .|+.+.|.+.+
T Consensus 86 -~~~~~~~~~~~Q~W~~~~~~~g~~y~i~n---~~sg~~Ldv~~~~~~~gt~i~~w~~~~~~ 143 (154)
T d2ihoa1 86 -WQGTAFTTNPHQLWTIKKSSDGTSYKIQN---YGSKTFVDLVNGDSSDGAKIAGWTGTWDE 143 (154)
T ss_dssp -ECCCTTCCCGGGCEEEEECTTSSSEEEEE---TTTCCEEEEGGGCCSTTEEEEEECCCSSC
T ss_pred -EeecccCCCcccEEEEccCCCcceEEEEE---cCCCcEEEcCCCCcCCCcEEEEEecccCC
Confidence 44 44 56899999766543 3433 35778999952 55 66667776643
|
| >d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: White mustard (Sinapis alba) [TaxId: 3728]
Probab=97.93 E-value=3.1e-06 Score=89.95 Aligned_cols=110 Identities=10% Similarity=-0.025 Sum_probs=82.5
Q ss_pred HHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCE
Q 008330 78 MDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVM 157 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~ 157 (570)
.+++++.|+++|+|+-|+.++|.-+.++. .. +.-.+...++.++++|+.+.++||.
T Consensus 77 y~eDi~l~~~lG~~~yRfSI~WsRI~P~g----~~--------------------~~~~n~~gl~~Y~~~i~~l~~~GI~ 132 (499)
T d1e4mm_ 77 WQKDIDVLDELNATGYRFSIAWSRIIPRG----KR--------------------SRGVNEKGIDYYHGLISGLIKKGIT 132 (499)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHCTTS----SG--------------------GGCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHhCCCEEEccCCHHHcCcCC----CC--------------------CCCCCHHHHHHHHHHHHHHHHcCCc
Confidence 68999999999999999999997766521 00 0113567899999999999999999
Q ss_pred EEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 158 VILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 158 VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
.||.+|+.. |.|.... ..||-+. ...+.|.++-+.++++|++.-. -+=.+|||.
T Consensus 133 P~vTL~HfdlP~~l~~~--~GGW~~~--~~~~~F~~YA~~v~~~fgd~Vk--~W~T~NEP~ 187 (499)
T d1e4mm_ 133 PFVTLFHWDLPQTLQDE--YEGFLDP--QIIDDFKDYADLCFEEFGDSVK--YWLTINQLY 187 (499)
T ss_dssp EEEEEESSCCBHHHHHH--HCGGGST--HHHHHHHHHHHHHHHHHTTTCC--EEEEESCTT
T ss_pred ceEEEecCchHHHHHHh--cccccCH--HHHHHHHHHHHHHHHhhccccc--eeEEccCce
Confidence 999998864 5553210 0244333 2478999999999999999632 355789996
|
| >d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
Probab=97.89 E-value=3.6e-05 Score=76.56 Aligned_cols=120 Identities=18% Similarity=0.156 Sum_probs=72.9
Q ss_pred EeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCC
Q 008330 58 CVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVD 137 (570)
Q Consensus 58 GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~ 137 (570)
||||... |-.-.+.+++++.|+++||+.||| ++. +
T Consensus 2 gi~yg~~-------~~nlps~~~vv~lLk~~~i~~IRl-Y~~--------------------------------d----- 36 (312)
T d2cyga1 2 GVCYGML-------GNNLPPPSEVVSLYKSNNIARMRL-YDP--------------------------------N----- 36 (312)
T ss_dssp EEECCCC-------CSSCCCHHHHHHHHHHTTCCEEEE-SSC--------------------------------C-----
T ss_pred eeeCCCc-------cCCCCCHHHHHHHHHhCCCCEEEE-eCC--------------------------------C-----
Confidence 8888532 222245788899999999999998 211 1
Q ss_pred chHHHHHHHHHHHHhcCCCEEEEecCCCC-CCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCC
Q 008330 138 LPLIKAFQAVVASLGNNNVMVILDNHISK-PGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNEL 216 (570)
Q Consensus 138 ~t~l~~ld~vV~~a~~~Gl~VILD~H~~~-~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP 216 (570)
..++++++..||+|+|-+-... +.|. .+. ...++| .+.....|....+|-++-+-||+
T Consensus 37 -------~~vL~A~~~tgi~v~lGv~n~~l~~~~----------~~~-~~a~~w---v~~~v~~~~~~~~I~~IaVGNE~ 95 (312)
T d2cyga1 37 -------QAALQALRNSNIQVLLDVPRSDVQSLA----------SNP-SAAGDW---IRRNVVAYWPSVSFRYIAVGNEL 95 (312)
T ss_dssp -------HHHHHHHTTSCCEEEEEECHHHHHHHH----------HCT-THHHHH---HHHHTGGGTTTSEEEEEEEEESC
T ss_pred -------HHHHHHHHhcCCEEEEeeccchhhhcc----------CCH-HHHHHH---HHHHHhccCCCceEEEEEecCEE
Confidence 1366778889999999763210 0000 011 112333 23444567777789899999998
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhcCCC
Q 008330 217 RGPKQNVKDWYRYMQLGAEAVHAANPE 243 (570)
Q Consensus 217 ~~~~~~~~~W~~~~~~~~~aIr~~dp~ 243 (570)
.........-...++....++++.+=.
T Consensus 96 l~~~~~~~~~lpa~~~~~~aL~~~g~~ 122 (312)
T d2cyga1 96 IPGSDLAQYILPAMRNIYNALSSAGLQ 122 (312)
T ss_dssp TTTSTTGGGHHHHHHHHHHHHHHTTCT
T ss_pred eeCCcCchhhcccHHHHHHHHHHCCCC
Confidence 654332333345566677777777654
|
| >d1qxma2 b.42.2.1 (A:149-286) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=97.87 E-value=2.4e-05 Score=68.27 Aligned_cols=105 Identities=14% Similarity=0.097 Sum_probs=75.3
Q ss_pred cceeeCCCCceeeeecCCCCceecCCCCCC--CCccccCCc-----ceeecccceEEeeccC-CccceeccccC-CCCCc
Q 008330 411 HKVIYHPATGLCVQRKSFLDPLTLGPCTES--EAWSYTPHK-----TISLKGAYFCLQAKHV-GKPAKLGIICT-DCGST 481 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~~~~~~~~~c~~~--~~W~~~~~~-----~~~~~~~~~cl~a~~~-g~~~~~~~~c~-~~~~~ 481 (570)
+.|.....++.|++...+.+.+.+++|.++ ++|.....+ .|+-..+++||++.+. |.++. .++|. +++|+
T Consensus 4 ~~i~t~~n~~k~l~~~~n~~~v~~w~~~~~~nQ~W~~~~~~~~~~y~i~~~~~~~~l~~~~~~g~~v~-~~~~~~~~~Q~ 82 (138)
T d1qxma2 4 CKLQTQLNSDRFLSKNLNSQIIVLWQWFDSSRQKWIIEYNETKSAYTLKCQENNRYLTWIQNSNNYVE-TYQSTDSLIQY 82 (138)
T ss_dssp EEEEETTCTTCEEEECTTSSBEEEECCCCCGGGCEEEEEETTTTEEEEEETTTTEEEEECCSTTCBEE-EECCCSSGGGC
T ss_pred eEEEEeeCCCEEEEEccCCceEEEECCCCCcccCEEEEECCCcCEEEEEeCCCCCEEccccCCCcEEE-EEcCCCChhcE
Confidence 456677788899988655567999999986 799986433 3555678899998764 55544 48899 77899
Q ss_pred eeEeecc----ccEEEEecCCCceEEEeecC----CC-ceeeccee
Q 008330 482 WEIISDS----KMHLSSKADNGTTVCLDVDS----SN-TIVTNTCK 518 (570)
Q Consensus 482 W~~~s~~----~~~~~~~~~~~~~~cld~~~----~~-~~~~~~c~ 518 (570)
|.+...+ ..+| .....+.+|||+.+ +| .|+++.|.
T Consensus 83 W~i~~~~~~~g~y~i--~~~~~s~~~Ldv~~~~~~nGt~v~~~~~~ 126 (138)
T d1qxma2 83 WNINYLDNDASKYIL--YNLQDTNRVLDVYNSQIANGTHVIVDSYH 126 (138)
T ss_dssp EEEEEETTEEEEEEE--EETTCTTEEEEEGGGCCSTTCBEEEEECC
T ss_pred EEEeccccCCCcEEE--EEecCCCccEEECCCCcCCCCEEEEECCC
Confidence 9986543 3333 23345789999962 55 67778874
|
| >d1m2tb1 b.42.2.1 (B:249-384) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: European mistletoe (Viscum album) [TaxId: 3972]
Probab=97.86 E-value=1.1e-05 Score=70.17 Aligned_cols=97 Identities=19% Similarity=0.317 Sum_probs=67.9
Q ss_pred ceeeCCCCceeeeecCC----CCceecCCCCC----CCCccccCCcceeecccceEEeecc--CCccceeccccCC---C
Q 008330 412 KVIYHPATGLCVQRKSF----LDPLTLGPCTE----SEAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICTD---C 478 (570)
Q Consensus 412 ~~~~~~~tg~c~~~~~~----~~~~~~~~c~~----~~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~~---~ 478 (570)
+.+. -.+|+|+++.+. ..++.++.|.. .+.|.++.++.|+. .++||++.+ .|.++.+ ..|.+ .
T Consensus 11 ~~i~-~~~G~ClDv~~~~~~~G~~v~l~~c~~n~~~~Q~w~~~~~g~ir~--~~~cld~~~~~~g~~v~~-~~C~~~~~~ 86 (136)
T d1m2tb1 11 VRIV-GRNGMTVDVRDDDFHDGNQIQLWPSKSNNDPNQLWTIKKDGTIRS--NGSCLTTYGYTAGVYVMI-FDCNTAVRE 86 (136)
T ss_dssp ECEE-CGGGCEEEEGGGCCSTTCBEEEECCCCSCCGGGCEEECTTSCEEE--TTEEEEESCSSTTCBEEE-EETTTSCGG
T ss_pred EEEe-CCCCeEEEcCCCCCCCCCEEEEEecCCCCCccEEEEEeCCccEEE--CCccccccCCCCCCeEEE-EecCCCCCc
Confidence 3444 347999998442 36799999964 26999999988764 679999876 4666666 88973 2
Q ss_pred CCceeEeeccccEEEEecCCCceEEEeecC--CC-ceeecce
Q 008330 479 GSTWEIISDSKMHLSSKADNGTTVCLDVDS--SN-TIVTNTC 517 (570)
Q Consensus 479 ~~~W~~~s~~~~~~~~~~~~~~~~cld~~~--~~-~~~~~~c 517 (570)
+|+|++.+++.+ . ...+.+|||+.. +| .|..+.|
T Consensus 87 ~q~w~~~~~g~i--~---n~~s~lcLd~~~~~~g~~v~~~~c 123 (136)
T d1m2tb1 87 ATIWQIWGNGTI--I---NPRSNLVLAASSGIKGTTLTVQTL 123 (136)
T ss_dssp GGCCEECTTSCE--E---ETTTTEEEECSSCSTTCBCEEECC
T ss_pred cEEEeEcCCCcE--E---eccCCeEeccccCCCCCEEEEEcC
Confidence 478988776653 2 235689999964 55 4555665
|
| >d1rzob1 b.42.2.1 (B:2001-2135) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Castor bean (Ricinus communis), Ricin [TaxId: 3988]
Probab=97.84 E-value=7.7e-06 Score=71.13 Aligned_cols=93 Identities=20% Similarity=0.386 Sum_probs=65.3
Q ss_pred CCceeeeecCC----CCceecCCCCCC----CCccccCCcceeecccceEEeeccC--Ccc-ceeccccC-CCCCceeEe
Q 008330 418 ATGLCVQRKSF----LDPLTLGPCTES----EAWSYTPHKTISLKGAYFCLQAKHV--GKP-AKLGIICT-DCGSTWEII 485 (570)
Q Consensus 418 ~tg~c~~~~~~----~~~~~~~~c~~~----~~W~~~~~~~~~~~~~~~cl~a~~~--g~~-~~~~~~c~-~~~~~W~~~ 485 (570)
.+|+|+++.+. ..++.+++|..+ +.|.+++.+.|+ .+++||+..+. +.. .+...+|. .++|+|++-
T Consensus 16 ~~G~CLDv~g~~~~~G~~v~l~~C~~~~~~~Q~w~~~~~g~i~--~~~~cld~~~~~~~~g~~v~~~~~~~~~~Q~W~~~ 93 (135)
T d1rzob1 16 RNGLCVDVTGEEFFDGNPIQLWPCKSNTDWNQLWTLRKDSTIR--SNGKCLTISKSSPRQQVVIYNCSTATVGATRWQIW 93 (135)
T ss_dssp GGGEEEEEGGGCCSTTCBEEEEECCSSCCGGGCEECCTTSBCB--BTTEEEEEECCTTCCEEEEEETTTSCGGGTBCEEC
T ss_pred CCCeEEEcCCCCCCCCCEEEEEecCCCCCccEEEEECCCCeEE--ecCceeeccCCccCCCeEEEEecCCCCCceeEEEc
Confidence 47999998442 356999999653 599999998775 57888887763 222 33357788 567999996
Q ss_pred eccccEEEEecCCCceEEEeecC--CC-ceeecce
Q 008330 486 SDSKMHLSSKADNGTTVCLDVDS--SN-TIVTNTC 517 (570)
Q Consensus 486 s~~~~~~~~~~~~~~~~cld~~~--~~-~~~~~~c 517 (570)
.+.. |.. ..+++|||+.+ +| .++.+.|
T Consensus 94 ~~~~--i~~---~~sg~cLd~~~~~~g~~v~~~~c 123 (135)
T d1rzob1 94 DNRT--IIN---PRSGLVLAATSGNSGTKLTVQTN 123 (135)
T ss_dssp TTSB--EEE---TTTTEEEECSCSSTTCBCEEEEC
T ss_pred CCCE--EEe---CCCCeEEeecCCCCCCEEEEEcC
Confidence 6655 322 35789999974 44 5666765
|
| >d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]
Probab=97.77 E-value=7.3e-05 Score=74.01 Aligned_cols=118 Identities=14% Similarity=0.130 Sum_probs=71.4
Q ss_pred EeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCC
Q 008330 58 CVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVD 137 (570)
Q Consensus 58 GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~ 137 (570)
||||... |-.-.+.+++++.|+++|++.||| ++. +
T Consensus 2 Gv~yg~~-------~~nlps~~~Vv~lLk~~~i~~IRl-Y~~--------------------------------d----- 36 (306)
T d1aq0a_ 2 GVCYGMS-------ANNLPAASTVVSMFKSNGIKSMRL-YAP--------------------------------N----- 36 (306)
T ss_dssp EEECCCC-------CSSCCCHHHHHHHHHHHTCCEEEE-SSC--------------------------------C-----
T ss_pred eeeCCCc-------cCCCCCHHHHHHHHHhCCCCEEEE-eCC--------------------------------C-----
Confidence 8898532 222235788999999999999998 211 1
Q ss_pred chHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 138 LPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 138 ~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
..|+++++..||.|+|.+-.... .. +. .+++...+..+.....| ...+|-++-+-||..
T Consensus 37 -------~~vL~A~~~~gi~v~lGv~n~~l---------~~-~~---~~~~~~~~~v~~~v~~~-~~~~I~~i~VGNE~~ 95 (306)
T d1aq0a_ 37 -------QAALQAVGGTGINVVVGAPNDVL---------SN-LA---ASPAAAASWVKSNIQAY-PKVSFRYVCVGNEVA 95 (306)
T ss_dssp -------HHHHHHHTTSCCEEEEEECGGGH---------HH-HH---HCHHHHHHHHHHHTTTC-TTSEEEEEEEEESCC
T ss_pred -------HHHHHHHHhcCCEEEEeccchhh---------hh-cc---CCHHHHHHHHHHhcccc-CCceEEEEEeccEee
Confidence 13677788999999998643210 00 00 12333333334444434 455788888999996
Q ss_pred CCCCChhHHHHHHHHHHHHHHhcCCC
Q 008330 218 GPKQNVKDWYRYMQLGAEAVHAANPE 243 (570)
Q Consensus 218 ~~~~~~~~W~~~~~~~~~aIr~~dp~ 243 (570)
... .......|+.+-+++++.+-+
T Consensus 96 ~~~--~~~l~~a~~ni~~al~~~gl~ 119 (306)
T d1aq0a_ 96 GGA--TRNLVPAMKNVHGALVAAGLG 119 (306)
T ss_dssp GGG--GGGHHHHHHHHHHHHHHTTCT
T ss_pred cCC--ccchhhHHHHHHHHHHHCCCC
Confidence 532 234556666666777776543
|
| >d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]
Probab=97.73 E-value=0.00027 Score=69.79 Aligned_cols=119 Identities=16% Similarity=0.102 Sum_probs=73.3
Q ss_pred EeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCC
Q 008330 58 CVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVD 137 (570)
Q Consensus 58 GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~ 137 (570)
||||... |-.-.+.+++++.|+++||+.||| ++. |
T Consensus 2 gi~yg~~-------~~n~ps~~~Vv~llks~~i~~VRl-Y~~-------------------------------------d 36 (306)
T d1ghsa_ 2 GVCYGVI-------GNNLPSRSDVVQLYRSKGINGMRI-YFA-------------------------------------D 36 (306)
T ss_dssp EEECCCC-------SSSCCCHHHHHHHHHHHTCCEEEE-SSC-------------------------------------C
T ss_pred eeeCCCc-------cCCCCCHHHHHHHHHhCCCCEEEE-eCC-------------------------------------C
Confidence 8888432 112235788899999999999998 211 1
Q ss_pred chHHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCC
Q 008330 138 LPLIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELR 217 (570)
Q Consensus 138 ~t~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~ 217 (570)
..++++++..||+|+|-+-.... .. + ..+++...+..+.....|....+|-++-+-||-.
T Consensus 37 -------~~vL~A~~~~gi~v~lGv~n~~l---------~~-~---~~~~~~a~~~v~~~i~~~~~~~~I~~I~VGNEvl 96 (306)
T d1ghsa_ 37 -------GQALSALRNSGIGLILDIGNDQL---------AN-I---AASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQ 96 (306)
T ss_dssp -------HHHHHHTTTSCCEEEEECCGGGH---------HH-H---HHCHHHHHHHHHHHTTTTTTTSEEEEEEEEESCC
T ss_pred -------HHHHHHHHhcCCEEEEEeccchh---------hh-h---ccCHHHHHHHHHHHHHhhCCCceEEEEEecceec
Confidence 13667788999999997532110 00 0 0122333333334445666666788899999975
Q ss_pred CCCCChhHHHHHHHHHHHHHHhcCCC
Q 008330 218 GPKQNVKDWYRYMQLGAEAVHAANPE 243 (570)
Q Consensus 218 ~~~~~~~~W~~~~~~~~~aIr~~dp~ 243 (570)
.. .......+|+.+-+++++.+=.
T Consensus 97 ~~--~~~~l~~a~~~i~~al~~~gl~ 120 (306)
T d1ghsa_ 97 GG--ATQSILPAMRNLNAALSAAGLG 120 (306)
T ss_dssp GG--GGGGHHHHHHHHHHHHHHHTCT
T ss_pred cC--CcchhHHHHHHHHHHHHHCCCC
Confidence 43 2345666777777777776543
|
| >d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase H N-terminal domain species: Clostridium thermocellum [TaxId: 1515]
Probab=97.63 E-value=0.00098 Score=64.55 Aligned_cols=181 Identities=13% Similarity=0.138 Sum_probs=106.1
Q ss_pred HHHHHHHHHHhcCCCEEEEecCCCCCCcc-ccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCC
Q 008330 142 KAFQAVVASLGNNNVMVILDNHISKPGWC-CSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPK 220 (570)
Q Consensus 142 ~~ld~vV~~a~~~Gl~VILD~H~~~~~w~-~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~ 220 (570)
..+...++.+..+|...+|.++-....+. +. . | . + + +.++++|+..+....-+.+.+.+|..+.+
T Consensus 42 ~~~~~~~~~~~~~g~~~~it~~P~~~~~~~ia--~--G----~-y--D---~~i~~~a~~l~~~g~pv~~R~~hE~ng~W 107 (273)
T d2v3ga1 42 SWVRPYADAVYNNGSILMITWEPWEYNTVDIK--N--G----K-A--D---AYITRMAQDMKAYGKEIWLRPLHEANGDW 107 (273)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCCHHHHH--T--T----T-T--H---HHHHHHHHHHHHHCSCEEEEESCCTTSSS
T ss_pred hhHHHHHHHHHhCCCeEEEEeCCCCCCHHHHh--C--c----c-h--H---HHHHHHHHHHHhcCCCEEEEecccCCCCc
Confidence 34566777888999999998763211110 00 0 1 1 1 2 23344444443222223499999998753
Q ss_pred -----------CChhHHHHHHHHHHHHHHhcCCCcEEEEeCCC---CCCcchhhhhcccCcCCCCCE-EEEEeecCCCCC
Q 008330 221 -----------QNVKDWYRYMQLGAEAVHAANPEVLVILSGLN---FDKDLSFVRNQAVNLTFTGKL-VFEAHWYGFTDG 285 (570)
Q Consensus 221 -----------~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~---w~~dl~~~~~~p~~l~~~~nl-Vys~H~Y~~~~~ 285 (570)
.+.+++.+..+++++++|+.+.+.+++|=.++ ..+.-....-.| -++-| ++.++.|.+...
T Consensus 108 ~~W~~~~~~~~~~p~~y~~a~r~v~~~~r~~g~~nv~~vw~p~~~~~~~~~~~~~yYP----GDdyVD~vG~d~Y~~~~~ 183 (273)
T d2v3ga1 108 YPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWVFNVNCDNVGNGTSYLGHYP----GDNYVDYTSIDGYNWGTT 183 (273)
T ss_dssp STTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTTEEEBCCEESSCCSTTCCSSTTCC----CGGGCSBEEEEEEECTTC
T ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCChhhHHhhCC----CCCEEEEEEEeccCCCCc
Confidence 25678999999999999998888888874322 111111111122 12222 678888875544
Q ss_pred CCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCcchHHHHHHHHHHHHH
Q 008330 286 QAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNVNDNRYLNCFFGVAAE 347 (570)
Q Consensus 286 ~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~~~~~~~~~~~~~~~~ 347 (570)
..|.... . .+.+.+.....++...++|++|+|||....+++ ...|++.+.+.+.+
T Consensus 184 ~~~~~~~-~----~~~~~~~~~~~~~~~~~KPi~i~E~G~~~~~~~--~~~W~~~~~~~~~~ 238 (273)
T d2v3ga1 184 QSWGSQW-Q----SFDQVFSRAYQALASINKPIIIAEFASAEIGGN--KARWITEAYNSIRT 238 (273)
T ss_dssp CTTTCCC-C----CHHHHHHHHHHHHTTSSSCEEEEEEEECSTTSC--HHHHHHHHHHHHHH
T ss_pred ccchhhh-h----hHHHHHHHHHHHHHhCCCCEEEEeecCCCCCCc--hhHHHHHHHHHHHh
Confidence 3332211 1 233344444455566899999999998765543 46899999987753
|
| >d1m2tb2 b.42.2.1 (B:385-510) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: European mistletoe (Viscum album) [TaxId: 3972]
Probab=97.58 E-value=3.9e-05 Score=65.77 Aligned_cols=73 Identities=10% Similarity=0.163 Sum_probs=56.3
Q ss_pred ceeeCCCCceeeeecCC--CCceecCCCCCC---CCccccCCcceeecccceEEeeccC---CccceeccccC-CCCCce
Q 008330 412 KVIYHPATGLCVQRKSF--LDPLTLGPCTES---EAWSYTPHKTISLKGAYFCLQAKHV---GKPAKLGIICT-DCGSTW 482 (570)
Q Consensus 412 ~~~~~~~tg~c~~~~~~--~~~~~~~~c~~~---~~W~~~~~~~~~~~~~~~cl~a~~~---g~~~~~~~~c~-~~~~~W 482 (570)
.+..+..+|+|+++.+. ...+.+..|..+ ++|.+++++.|.-+.+++||++.|. |..+. .+.|. +++|+|
T Consensus 44 ~ir~~~~~~~CL~~~~~~~g~~v~l~~C~~g~~~Q~W~~~~~g~i~n~~sg~cLDv~g~~~~g~~v~-~~~c~g~~nQ~W 122 (126)
T d1m2tb2 44 SIRPKQLQSQCLTNGRDSISTVINIVSCSAGSSGQRWVFTNEGAILNLKNGLAMDVAQANPSLQRII-IYPATGNPNQMW 122 (126)
T ss_dssp CEEETTCTTEEEECSSCSTTCBCEEEESTTCCGGGCEEECTTSCEEETTTCCEEEEGGGCGGGCCEE-EECCCCCGGGCC
T ss_pred cEEeccCcceeeeecCCCCCCeEEEEeecCCCccceEEEecCceEEecCCCceEeccCCCCCCCeEE-EEcCCCChhhcE
Confidence 46667788999998543 245888999653 6899999998887889999998763 34444 48899 788999
Q ss_pred eEe
Q 008330 483 EII 485 (570)
Q Consensus 483 ~~~ 485 (570)
.++
T Consensus 123 ~~~ 125 (126)
T d1m2tb2 123 LPV 125 (126)
T ss_dssp EEE
T ss_pred EcC
Confidence 875
|
| >d1ggpb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]
Probab=97.58 E-value=3.9e-05 Score=65.96 Aligned_cols=72 Identities=10% Similarity=0.152 Sum_probs=56.2
Q ss_pred ceeeCCCCceeeeecCC--CCceecCCCCCC--CCccccCCcceeecccceEEeeccC---CccceeccccC-CCCCcee
Q 008330 412 KVIYHPATGLCVQRKSF--LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKHV---GKPAKLGIICT-DCGSTWE 483 (570)
Q Consensus 412 ~~~~~~~tg~c~~~~~~--~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~~---g~~~~~~~~c~-~~~~~W~ 483 (570)
.+..+..+++|++..+. ..++.+.+|.++ ++|.+++++.|+-..+++||++.|. |..+. .+.|. +++|+|-
T Consensus 47 ~ir~~~~~~~CL~~~~~~~g~~V~~~~C~~~~~Q~W~~~~~g~i~n~~sg~CLDv~g~~~~g~~v~-~~~c~g~~nQ~W~ 125 (128)
T d1ggpb2 47 SIRSETNSDNCLTSAADAGPKTILLALCSGPASQRWVFDDDGSILSLYDDKQMDSEGAAAAAKQII-LWWNAAEPNQIWL 125 (128)
T ss_dssp EEEESSCTTEEECCCCCSSCCCCBEEECCCCTTSCCEECTTSSEEETTTTEEEEESSSCCSSSCEE-EECCCCCGGGCCE
T ss_pred CEEEcccCceeEeecccCCCCeEEEEecCCCcceEEEEeCCCcEEEeeCCceEecccCCCCCCEEE-EEcCCCChhcEEE
Confidence 45567788999988543 356889999875 7999999998887889999998764 34444 48998 8899996
Q ss_pred E
Q 008330 484 I 484 (570)
Q Consensus 484 ~ 484 (570)
.
T Consensus 126 ~ 126 (128)
T d1ggpb2 126 A 126 (128)
T ss_dssp E
T ss_pred e
Confidence 5
|
| >d1hwmb2 b.42.2.1 (B:136-266) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Sambucus ebulus, ebulin [TaxId: 28503]
Probab=97.50 E-value=5.1e-05 Score=65.43 Aligned_cols=72 Identities=14% Similarity=0.351 Sum_probs=56.6
Q ss_pred ceeeCCCCceeeeecCC--CCceecCCCCCC--CCccccCCcceeecccceEEeeccC---CccceeccccC-CCCCcee
Q 008330 412 KVIYHPATGLCVQRKSF--LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKHV---GKPAKLGIICT-DCGSTWE 483 (570)
Q Consensus 412 ~~~~~~~tg~c~~~~~~--~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~~---g~~~~~~~~c~-~~~~~W~ 483 (570)
.+..+..+++|+...+. ..++.+.+|..+ ++|.++.++.|.-..+++||++.|. |..+.+ +.|. +++|+|+
T Consensus 47 ~i~~~~~~~lCl~~~~~~~g~~v~l~~C~~~~~q~W~~~~~g~i~~~~s~~CLdv~g~~~~g~~v~~-~~C~~~~~Q~W~ 125 (131)
T d1hwmb2 47 TIRVNNSRGLCVTSNGYVSKDLIVIRKCQGLATQRWFFNSDGSVVNLKSTRVMDVKESDVSLQEVII-FPATGNPNQQWR 125 (131)
T ss_dssp CEEETTEEEEEEEESCSSTTEEEEEEECCCCGGGCCEECTTSCEEETTTTEEEEECTTCSSSCBEEE-ECCCCCGGGCEE
T ss_pred cEEeccCcceEEeccccCCCCEEEEEEcCCCcceEEEEeCCCeEEeccCCeEEEecCCCCCCCEEEE-ECCCCCcccceE
Confidence 45556778999988553 246999999876 6999999998877889999998764 344554 8999 7789999
Q ss_pred E
Q 008330 484 I 484 (570)
Q Consensus 484 ~ 484 (570)
+
T Consensus 126 ~ 126 (131)
T d1hwmb2 126 T 126 (131)
T ss_dssp E
T ss_pred e
Confidence 7
|
| >d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alpha-L-arabinofuranosidase, catalytic domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.47 E-value=0.003 Score=63.53 Aligned_cols=144 Identities=11% Similarity=0.100 Sum_probs=85.5
Q ss_pred HHHHHHHHHcCCcEEEecccc----cccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 79 DMLSKRVVDMGFNCVRLTWPL----YLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRlPi~~----~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
.++++.|++++.-.||.|=.- ..+.+ .+....++........+.. ++... -+++.+++|++-
T Consensus 37 ~dv~~~l~~l~~~~lR~PGG~~~~~y~W~~------~iGp~~~Rp~~~~~~w~~~--~~~~~------G~~Ef~~~~~~~ 102 (367)
T d1qw9a2 37 QDVIELVKELQVPIIRYPGGNFVSGYNWED------GVGPKEQRPRRLDLAWKSV--ETNEI------GLNEFMDWAKMV 102 (367)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGG------GSSCGGGCCCEEETTTTEE--ECCSS------CHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEeeCCccccCcccccc------ccCChHHCCCccCCCCCCc--CcCCC------CHHHHHHHHHHh
Confidence 588999999999999998642 11111 1110000100000001111 11111 278999999999
Q ss_pred CCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHH--------HHHHHhCCCC---cEEEEeccCCCCCCC---
Q 008330 155 NVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLT--------KMATIFNGVR---NVVGMSLRNELRGPK--- 220 (570)
Q Consensus 155 Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~--------~iA~ryk~~p---~Vig~dL~NEP~~~~--- 220 (570)
|.-.+|-+..-.+ ...+...|+++.. ++-.+. ++| +|--++|-||+.+.+
T Consensus 103 gaep~~~vn~g~~---------------~~~~a~d~vey~n~~~~t~~~~~R~~~-G~~~P~~v~yweIGNE~~g~~~~g 166 (367)
T d1qw9a2 103 GAEVNMAVNLGTR---------------GIDAARNLVEYCNHPSGSYYSDLRIAH-GYKEPHKIKTWCLGNAMDGPWQIG 166 (367)
T ss_dssp TCEEEEEECCSSC---------------CHHHHHHHHHHHHCCSSSHHHHHHHHT-TCCSCCCCCEEEESSCCCSTTSTT
T ss_pred CCeEEEEEeCCCc---------------cHHHHHHHHHHHccCCCCHHHHHHHHc-CCCCCCCceEEEeccccccccccC
Confidence 9999987654211 0011233444332 222222 233 688899999998753
Q ss_pred -CChhHHHHHHHHHHHHHHhcCCCcEEEEeCCC
Q 008330 221 -QNVKDWYRYMQLGAEAVHAANPEVLVILSGLN 252 (570)
Q Consensus 221 -~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG~~ 252 (570)
.+.+++...+++.++|||+++|+..++..|..
T Consensus 167 ~~~~~~Y~~~~~~f~~amk~~dP~i~lia~g~~ 199 (367)
T d1qw9a2 167 HKTAVEYGRIACEAAKVMKWVDPTIELVVCGSS 199 (367)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCTTCEEEECCCS
T ss_pred CCCHHHHHHHHHHHHHHHhhcCCCeeEEEEeCC
Confidence 25677888889999999999999887776643
|
| >d1knma_ b.42.2.1 (A:) Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) species: Streptomyces lividans [TaxId: 1916]
Probab=97.47 E-value=4.7e-05 Score=65.30 Aligned_cols=66 Identities=15% Similarity=0.344 Sum_probs=53.5
Q ss_pred CCceeeeecCC--CCceecCCCCCC--CCccccCCcceeecccceEEeeccC----CccceeccccC-CCCCceeE
Q 008330 418 ATGLCVQRKSF--LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKHV----GKPAKLGIICT-DCGSTWEI 484 (570)
Q Consensus 418 ~tg~c~~~~~~--~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~~----g~~~~~~~~c~-~~~~~W~~ 484 (570)
.++.|+++.+. ...|.++.|.++ ++|.+++++.|..+.+++||++.+. |.++.+ +.|. +++|+|++
T Consensus 54 ~~~~cLd~~~~~~g~~v~~~~c~~~~~Q~W~~~~~g~i~~~~s~~cLdv~~~~~~~g~~v~~-~~c~~~~~Q~Wt~ 128 (129)
T d1knma_ 54 YGDKCLDAAGTSNGSKVQIYSCWGGDNQKWRLNSDGSVVGVQSGLCLDAVGNGTANGTLIQL-YTCSNGSNQRWTR 128 (129)
T ss_dssp TTTEEEEESCSSTTCBEEEEECCCCGGGCEEECTTSCEEETTTCCEEEEGGGCCSTTCBEEE-ECCCCCGGGCEEC
T ss_pred cCCcceeeccccCCCEEEEEeCCCCCeEEEEEeCCceEEccCCCeEEEECCCCCCCCCEEEE-EeCCCCCcceEee
Confidence 57899998543 356999999987 6999999998888899999998875 455555 8898 77899975
|
| >d1sr4a_ b.42.2.1 (A:) Cytolethal distending toxin subunit A {Haemophilus ducreyi [TaxId: 730]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Cytolethal distending toxin subunit A species: Haemophilus ducreyi [TaxId: 730]
Probab=97.46 E-value=6.8e-05 Score=67.68 Aligned_cols=85 Identities=15% Similarity=0.375 Sum_probs=56.2
Q ss_pred CCCccccC---Ccc--eeecccceEEeeccCCccceeccccC--CCCCceeEeecccc--EEEEecCCCceEEEeecC--
Q 008330 440 SEAWSYTP---HKT--ISLKGAYFCLQAKHVGKPAKLGIICT--DCGSTWEIISDSKM--HLSSKADNGTTVCLDVDS-- 508 (570)
Q Consensus 440 ~~~W~~~~---~~~--~~~~~~~~cl~a~~~g~~~~~~~~c~--~~~~~W~~~s~~~~--~~~~~~~~~~~~cld~~~-- 508 (570)
.++|...+ .+. |+-..+++||++.|.| .+.+.|. +++|+|+++..++. +|..+ .+++|||+.+
T Consensus 57 ~Q~W~~~~~~~~g~~~i~N~~sg~CLd~~g~~---v~q~~C~~~~~~Q~W~~~~~~~G~~~i~n~---~sg~CLdv~~~s 130 (167)
T d1sr4a_ 57 IRNWKMEPGKHREYFRFVNQSLGTCVEAYGNG---LIHDICSLDKLAQEFELLPTDSGAVVIKSV---SQGRCVTYNPVS 130 (167)
T ss_dssp GGCEEEEECSSTTCEEEEETTTCCEEEEETTE---EEEECCCTTCGGGCEEEEEBTTSCEEEEET---TTCCEEEECSSC
T ss_pred cceEEEEecCCCCEEEEEECCCCcEEecCCCc---EEEEecCCCChHHeEEEEEecCceEEEEec---cccEEEEecCCC
Confidence 47999853 333 4446799999998764 4458996 45799999876654 44333 5789999984
Q ss_pred --CC-ceeecceeeeCCCCCCCccCceE
Q 008330 509 --SN-TIVTNTCKCLSRDKTCDPASQWF 533 (570)
Q Consensus 509 --~~-~~~~~~c~c~~~~~~~~~~~~~~ 533 (570)
+| .|....|..-... +...||.
T Consensus 131 t~~G~~v~~~~C~~~~~~---n~~QqW~ 155 (167)
T d1sr4a_ 131 TTFYSTVTLSVCDGATEP---SRDQTWY 155 (167)
T ss_dssp SSSCBCEEEECCCCCEET---TEECCEE
T ss_pred CCCCCEEEEEecCCCCCC---ChhhcEE
Confidence 45 5666888532111 3345775
|
| >d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glycosyl hydrolase family 5 xylanase, catalytic domain species: Erwinia chrysanthemi [TaxId: 556]
Probab=97.36 E-value=0.002 Score=62.34 Aligned_cols=183 Identities=14% Similarity=0.144 Sum_probs=97.0
Q ss_pred HHHHHHHhcCCCEEEEecCCCCCCccccCCCCC--CCCCCCCCCHHHHHHHHHHHHHHhCCC-CcEEEEeccCCCCCCCC
Q 008330 145 QAVVASLGNNNVMVILDNHISKPGWCCSNSDGN--GFFGDQYFNPDLWIKGLTKMATIFNGV-RNVVGMSLRNELRGPKQ 221 (570)
Q Consensus 145 d~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgn--g~~~d~~~~~~~~~~~w~~iA~ryk~~-p~Vig~dL~NEP~~~~~ 221 (570)
-.+++.|.++|++|+..-.. +|.|-..+.+.+ +.... ...+.|.+++.+.++.|+.+ =.|-++.+.|||.....
T Consensus 52 i~~~k~A~~~~~ki~~spWS-pP~wMK~n~~~~~gg~L~~--~~~~~~A~Yl~~~i~~y~~~Gi~i~~is~qNEP~~~~~ 128 (277)
T d1nofa2 52 LPSARQAVSLGAKIMATPWS-PPAYMKSNNSLINGGRLLP--ANYSAYTSHLLDFSKYMQTNGAPLYAISIQNEPDWKPD 128 (277)
T ss_dssp HHHHHHHHHTTCEEEEECSC-CCGGGBTTSSSBSCCBBCG--GGHHHHHHHHHHHHHHHHHTTCCCSEEESCSCTTCCCS
T ss_pred hHHHHHHHHcCCcEEEcCCC-CcHHHcCCCCcccCCccCH--HHHHHHHHHHHHHHHHHHHcCCCeeEEeecCCCCCCCC
Confidence 35666788899998776654 467864432211 11111 22578888999999999865 24678999999975421
Q ss_pred ------ChhHHHHHHHHHHHHHHhcCCCc-EEEEeCCCCCCcc-hhhhhcccCcCCCCCEEEEEeecCCCCCCCCCCCCC
Q 008330 222 ------NVKDWYRYMQLGAEAVHAANPEV-LVILSGLNFDKDL-SFVRNQAVNLTFTGKLVFEAHWYGFTDGQAWVDGNP 293 (570)
Q Consensus 222 ------~~~~W~~~~~~~~~aIr~~dp~~-lIiVeG~~w~~dl-~~~~~~p~~l~~~~nlVys~H~Y~~~~~~~w~~~~~ 293 (570)
+.++-.+++ +...+.-.+. +++-+...+..+. ..+...|-.. .---+..+|+|+-... .
T Consensus 129 ~~s~~~~~~~~~~~i----~~~~~~~~~~ki~~~d~~~~~~~~~~~~l~d~~a~--~~v~~ia~H~Y~~~~~-------~ 195 (277)
T d1nofa2 129 YESCEWSGDEFKSYL----KSQGSKFGSLKVIVAESLGFNPALTDPVLKDSDAS--KYVSIIGGHLYGTTPK-------P 195 (277)
T ss_dssp SBCCBCCHHHHHHHH----HHHGGGGTTSEEEEEEETTCCGGGTHHHHTCHHHH--TTCCEEEEECTTSCCC-------C
T ss_pred CCCcccCHHHHHHHH----HHhhhcccccceEeehhcCCcHHHhHHHhhChHHH--HHHHHhhccCCCCCcc-------c
Confidence 122222222 2222222233 4444444332221 1111111100 1123679999964321 0
Q ss_pred cchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCC--Cc-chHHHHHHHHHHHHHCCCceEEecc
Q 008330 294 NQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGN--NV-NDNRYLNCFFGVAAELDWDWALWTL 357 (570)
Q Consensus 294 ~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~--~~-~~~~~~~~~~~~~~~~gigw~~W~~ 357 (570)
. .. ....+.+++++|.+...... +. ....+.+.+...+...--+|.+|..
T Consensus 196 -~---~~----------~~~~~K~lw~TE~~~~~~~~~~~w~~a~~~a~~i~~~l~~~~~a~~~W~~ 248 (277)
T d1nofa2 196 -Y---PL----------AQNAGKQLWMTEHYVDSKQSANNWTSAIEVGTELNASMVSNYSAYVWWYI 248 (277)
T ss_dssp -C---HH----------HHHTTCEEEEEEECSCTTSCTTCHHHHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred -c---hh----------hhCCCccceeEEeeccCCCCcccHHHHHHHHHHHHHHHHcCCeeEEEcCC
Confidence 0 00 11257899999987543222 21 1356667777777643346899964
|
| >d1vcla2 b.42.2.1 (A:151-283) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemolytic lectin CEL-III, domains 1 and 2 species: Cucumaria echinata [TaxId: 40245]
Probab=97.34 E-value=0.00011 Score=63.28 Aligned_cols=71 Identities=14% Similarity=0.268 Sum_probs=52.6
Q ss_pred eeCCCCceeeeecCC--CCceecCCCCCC--CCccccCC---c---ceeecccceEEeeccC--CccceeccccC-CCCC
Q 008330 414 IYHPATGLCVQRKSF--LDPLTLGPCTES--EAWSYTPH---K---TISLKGAYFCLQAKHV--GKPAKLGIICT-DCGS 480 (570)
Q Consensus 414 ~~~~~tg~c~~~~~~--~~~~~~~~c~~~--~~W~~~~~---~---~~~~~~~~~cl~a~~~--g~~~~~~~~c~-~~~~ 480 (570)
+....+|+|+++.+. ...+.+.+|.++ ++|.+... + .|.-+.+++||++.+. |.++.+ +.|. +++|
T Consensus 49 ~~~~~s~~cLd~~~~~~~~~v~~~~c~~~~~Q~W~~~~~~~~~~~~~i~~~~s~~cLd~~~~~~g~~v~~-~~c~~~~~Q 127 (133)
T d1vcla2 49 IVNAKSGMCLDVEGSDGSGNVGIYRCDDLRDQMWSRPNAYCNGDYCSFLNKESNKCLDVSGDQGTGDVGT-WQCDGLPDQ 127 (133)
T ss_dssp EEETTTCCEEEESSSSSCSBEEEECCCCCGGGCEECCGGGCBTTEECCEETTTCCEEEESSSSSCSBEEE-ECCCCCGGG
T ss_pred eeeccCCceeeeccccCCCeeEEEEeCCCccceEEEcccccCCccEEEEEcCCCCEEEecCCCCCceEEE-EcCCCCHHh
Confidence 456778999999543 356999999886 69998532 1 4555778999999774 555555 8898 7789
Q ss_pred ceeEe
Q 008330 481 TWEII 485 (570)
Q Consensus 481 ~W~~~ 485 (570)
+|+++
T Consensus 128 ~W~f~ 132 (133)
T d1vcla2 128 RFKWV 132 (133)
T ss_dssp CEEEE
T ss_pred CEEEe
Confidence 99985
|
| >d1abrb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Abrus precatorius [TaxId: 3816]
Probab=97.33 E-value=0.0001 Score=63.10 Aligned_cols=72 Identities=17% Similarity=0.214 Sum_probs=55.3
Q ss_pred ceeeCCCCceeeeecCC--CCceecCCCCCC---CCccccCCcceeecccceEEeeccC---CccceeccccC-CCCCce
Q 008330 412 KVIYHPATGLCVQRKSF--LDPLTLGPCTES---EAWSYTPHKTISLKGAYFCLQAKHV---GKPAKLGIICT-DCGSTW 482 (570)
Q Consensus 412 ~~~~~~~tg~c~~~~~~--~~~~~~~~c~~~---~~W~~~~~~~~~~~~~~~cl~a~~~---g~~~~~~~~c~-~~~~~W 482 (570)
++.....+|+|+++.+. ...+.+..|..+ ++|.+.+.+.|+-+.+++||+..|. |..+.+ +.|. +++|+|
T Consensus 45 ~i~~~~~~~~CLd~~~~~~g~~v~l~~c~~~~~~q~W~~~~~g~i~~~~s~~CLdv~g~~~~g~~v~~-~~C~g~~nQ~W 123 (127)
T d1abrb2 45 SIRSVQNTNNCLTSKDHKQGSTILLMGCSNGWASQRWVFKNDGSIYSLYDDMVMDVKGSDPSLKQIIL-WPYTGKPNQIW 123 (127)
T ss_dssp CEEETTEEEEEEEESSSSTTCBEEEEESTTCCGGGCCEECTTSCEEETTTTEEEEEGGGCGGGCCEEE-ECCCCCGGGCC
T ss_pred eEEEcCCccEEEeecccCCCceEEEEeccCCCCceEEEEeeceEEEecCCCceEEcccCCCCCCEEEE-EcCCCCcccee
Confidence 45556678999998543 245888888654 6999999998888899999998653 555555 8898 778999
Q ss_pred eE
Q 008330 483 EI 484 (570)
Q Consensus 483 ~~ 484 (570)
.+
T Consensus 124 ~~ 125 (127)
T d1abrb2 124 LT 125 (127)
T ss_dssp EE
T ss_pred EE
Confidence 86
|
| >d2aaib2 b.42.2.1 (B:136-262) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Castor bean (Ricinus communis), Ricin [TaxId: 3988]
Probab=97.28 E-value=0.00014 Score=61.99 Aligned_cols=71 Identities=15% Similarity=0.192 Sum_probs=55.0
Q ss_pred ceeeCCCCceeeeecCC--CCceecCCCCCC---CCccccCCcceeecccceEEeeccC---CccceeccccC-CCCCce
Q 008330 412 KVIYHPATGLCVQRKSF--LDPLTLGPCTES---EAWSYTPHKTISLKGAYFCLQAKHV---GKPAKLGIICT-DCGSTW 482 (570)
Q Consensus 412 ~~~~~~~tg~c~~~~~~--~~~~~~~~c~~~---~~W~~~~~~~~~~~~~~~cl~a~~~---g~~~~~~~~c~-~~~~~W 482 (570)
++..+..+++|++..+. ..++.+.+|..+ +.|.+++.+.|+-+.+++||++.+. |.++.+ +.|. +++|+|
T Consensus 45 ~ir~~~~~~~CL~~~~~~~g~~v~~~~C~~~~~~q~W~~~~~g~i~~~~sg~CLdv~g~~~~g~~v~~-~~C~g~~~Q~W 123 (127)
T d2aaib2 45 SIRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRWMFKNDGTILNLYSGLVLDVRASDPSLKQIIL-YPLHGDPNQIW 123 (127)
T ss_dssp CEEETTSTTEEEEECCSSCSSCEEEEESTTCCTTSCCEECTTSCEECTTTCCEEEEGGGCGGGCCEEE-ECCCCCGGGCC
T ss_pred cEEEcccccccccccccCCCccEEEEecCCCCCcceeEEecCceEEeeccCceEEecCCCCCCCEEEE-EeCCCCcccee
Confidence 45567778999998543 356999999753 6999999888887899999998753 444544 8899 778999
Q ss_pred e
Q 008330 483 E 483 (570)
Q Consensus 483 ~ 483 (570)
-
T Consensus 124 ~ 124 (127)
T d2aaib2 124 L 124 (127)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1ggpb1 b.42.2.1 (B:11-140) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]
Probab=97.18 E-value=0.00022 Score=60.89 Aligned_cols=66 Identities=17% Similarity=0.276 Sum_probs=51.8
Q ss_pred CCceeeeecCC-CCceecCCCCCC--C--CccccCCcceeecccceEEeeccC--CccceeccccC-CCCCceeE
Q 008330 418 ATGLCVQRKSF-LDPLTLGPCTES--E--AWSYTPHKTISLKGAYFCLQAKHV--GKPAKLGIICT-DCGSTWEI 484 (570)
Q Consensus 418 ~tg~c~~~~~~-~~~~~~~~c~~~--~--~W~~~~~~~~~~~~~~~cl~a~~~--g~~~~~~~~c~-~~~~~W~~ 484 (570)
.+|+|+++... ..++.+.+|+.+ + +|.++.++.|.-+.+++||++.+. |.++.+ ..|. +++|+|++
T Consensus 51 ~~g~CLd~~~~~g~~V~l~~C~~~~~q~~~W~~~~~g~i~n~~sg~cLd~~~~~~g~~l~~-~~~~~~~~Q~W~~ 124 (126)
T d1ggpb1 51 SNGGCLTTAAAEQAKAGIYDCTQATAELSAWEIADNGTIINPASSLVLSSGAANSLLDLGV-QTNSYASAQGWRT 124 (126)
T ss_dssp SSSSEEEEECSSSCEEEEECTTTSCHHHHCCEECTTSCEEETTTTEEEECSSSCTTEECEE-ECCCCCSTTCCEE
T ss_pred ecceEeeeccCCCccEEEEecCCCCcccEEEEEcCCCcEEccccceeEEecCCCCCceEEE-EeCCCCcccccCc
Confidence 36899998543 356999999875 3 799998888888889999998763 555666 6677 88899986
|
| >d1xhba1 b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.12 E-value=0.00018 Score=61.78 Aligned_cols=66 Identities=23% Similarity=0.510 Sum_probs=51.3
Q ss_pred CceeeeecCCCCceecCCCCCC---CCccccCCc-ceeecccceEEeeccC--CccceeccccC-CCCCceeEe
Q 008330 419 TGLCVQRKSFLDPLTLGPCTES---EAWSYTPHK-TISLKGAYFCLQAKHV--GKPAKLGIICT-DCGSTWEII 485 (570)
Q Consensus 419 tg~c~~~~~~~~~~~~~~c~~~---~~W~~~~~~-~~~~~~~~~cl~a~~~--g~~~~~~~~c~-~~~~~W~~~ 485 (570)
+++|+++......+.+..|..+ ++|.|++++ .|.-+.+++||++.+. |..+.+ ..|. +++|+|++-
T Consensus 57 ~~~Cld~~~~~~~v~l~~C~~~~~~Q~W~~~~~~~~i~~~~s~~CLd~~~~~~~~~l~~-~~C~~~~~Q~W~~~ 129 (131)
T d1xhba1 57 DDLCLDVSKLNGPVTMLKCHHLKGNQLWEYDPVKLTLQHVNSNQCLDKATEEDSQVPSI-RDCTGSRSQQWLLR 129 (131)
T ss_dssp TTEEEECCSTTCCCEEEECCTTCGGGCEEEETTTTEEEESSSCEEEESCCSSSTTSCEE-EECCCCGGGCEEEC
T ss_pred CCEeeeccCCcccEEEEEecCCCceEEEEEcCCCceEECCCCCceEeCcccCCCceEEE-eCCCCCCccEEEEE
Confidence 5799998655456999999774 689998765 6666789999998763 555655 8898 778999973
|
| >d1upsa2 b.42.2.3 (A:290-420) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain {Clostridium perfringens [TaxId: 1502]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain domain: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain species: Clostridium perfringens [TaxId: 1502]
Probab=97.05 E-value=0.0016 Score=55.86 Aligned_cols=99 Identities=9% Similarity=0.002 Sum_probs=69.4
Q ss_pred ceeeCCCCceeeeecCC--CCceecCCCCCC--CCccccC-Cc--ceeecccceEEeeccCCccceeccccC-CCCCcee
Q 008330 412 KVIYHPATGLCVQRKSF--LDPLTLGPCTES--EAWSYTP-HK--TISLKGAYFCLQAKHVGKPAKLGIICT-DCGSTWE 483 (570)
Q Consensus 412 ~~~~~~~tg~c~~~~~~--~~~~~~~~c~~~--~~W~~~~-~~--~~~~~~~~~cl~a~~~g~~~~~~~~c~-~~~~~W~ 483 (570)
+.|-...||+|+.+.+. ...+...+|+++ ++|..+. +| .|+=+.+++||+.++..-+......+. ..+|+|+
T Consensus 3 Y~I~N~~sGk~L~v~~~~~~~~~~~~~~~~~~~qqW~~~~~~g~y~i~n~~sg~~l~~~~~sg~~~~~~~~~~~~~qqW~ 82 (131)
T d1upsa2 3 YLIRNRQTGKFLYIEENNDKVSYGDITLKNEKNAKWSKEYRDGYTLLKNNETGEYLNIENQTGYIEHGKVPKTWWSAQWS 82 (131)
T ss_dssp EEEEETTTCCEEECCTTCSSCEEECCCTTTTGGGCEEEEEETTEEEEEETTTCCEEECTTCCSBCEEECCCTTCGGGCEE
T ss_pred EEEEEccCCcEEEEeCCCCcEEEeccccCCCcccEEEEEeCCCEEEEEECCCCcEEEccCCCCceEEEccCCCChhHeEE
Confidence 67788899999997543 244666777664 5899973 33 455577999999998654455555555 7789999
Q ss_pred EeeccccEEEEecCCCceEEEeecC-CCc
Q 008330 484 IISDSKMHLSSKADNGTTVCLDVDS-SNT 511 (570)
Q Consensus 484 ~~s~~~~~~~~~~~~~~~~cld~~~-~~~ 511 (570)
+.+.+.. ........+..|||+++ +|.
T Consensus 83 l~~~gg~-~~i~n~~~s~~~L~v~~~sG~ 110 (131)
T d1upsa2 83 EVPVDGY-TRFVNRWKPNMSIHTESYEGV 110 (131)
T ss_dssp EEEETTE-EEEEESSSTTCEEECTTCCSB
T ss_pred EEecCCc-EEEEEeccCCeEEEEecCCcc
Confidence 9887654 44454556679999985 443
|
| >d2zqna1 b.42.2.1 (A:131-260) 29-kDa galactose-binding lectin {Lumbricus terrestris [TaxId: 6398]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: 29-kDa galactose-binding lectin species: Lumbricus terrestris [TaxId: 6398]
Probab=96.90 E-value=0.00033 Score=59.98 Aligned_cols=70 Identities=13% Similarity=0.080 Sum_probs=53.3
Q ss_pred eeCCCCceeeeecCCCCceecCCCCCC--CCccccCCccee-ecccceEEeeccC----CccceeccccC-CCCCceeEe
Q 008330 414 IYHPATGLCVQRKSFLDPLTLGPCTES--EAWSYTPHKTIS-LKGAYFCLQAKHV----GKPAKLGIICT-DCGSTWEII 485 (570)
Q Consensus 414 ~~~~~tg~c~~~~~~~~~~~~~~c~~~--~~W~~~~~~~~~-~~~~~~cl~a~~~----g~~~~~~~~c~-~~~~~W~~~ 485 (570)
+....+|+|+++.+ ..+.+++|..+ ++|...+++.+. .+.+++||++.|. |+++.+ +.|. +++|+|++-
T Consensus 52 i~~~~~~~~ld~~G--~~v~~~~c~~~~~qqW~~~~~g~~~~~~~~~~~LDv~~~~~~~G~~v~~-~~~~g~~nQ~W~l~ 128 (130)
T d2zqna1 52 IRSKLNDFAIDASH--EQIETQPFDPNNPKRAWIVSGNTIAQLSDRDIVLDIIKSDKEAGAHICA-WKQHGGPNQKFIIE 128 (130)
T ss_dssp EEETTTCCEEECSS--SSCEEECCCTTCGGGCEEEETTEEEETTEEEEEEEEGGGCCSTTCBEEE-EECCCCGGGCEEEE
T ss_pred EEEccccccccccC--cceEEeccCCCcccEEEEcCCCeEEEeccCCeEEECCCCCCCCCCEEEE-EcCCCCccceEEEe
Confidence 44567899999855 34889999887 699988777443 3568899998885 454555 8899 789999985
Q ss_pred e
Q 008330 486 S 486 (570)
Q Consensus 486 s 486 (570)
|
T Consensus 129 ~ 129 (130)
T d2zqna1 129 S 129 (130)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glucosylceramidase, catalytic domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.88 E-value=0.014 Score=57.94 Aligned_cols=194 Identities=14% Similarity=0.131 Sum_probs=101.2
Q ss_pred HHHHHHh---cCCCEEEEecCCCCCCccccCCCCC--CCCCCCC--CCHHHHHHHHHHHHHHhCCCC-cEEEEeccCCCC
Q 008330 146 AVVASLG---NNNVMVILDNHISKPGWCCSNSDGN--GFFGDQY--FNPDLWIKGLTKMATIFNGVR-NVVGMSLRNELR 217 (570)
Q Consensus 146 ~vV~~a~---~~Gl~VILD~H~~~~~w~~~~~dgn--g~~~d~~--~~~~~~~~~w~~iA~ryk~~p-~Vig~dL~NEP~ 217 (570)
.+++.|. ..+|+|+..-... |.|-..+...+ +...... ...+.|.+++.++++.|+.+- .|-.+.+.|||.
T Consensus 82 ~~l~~a~~~~~~~l~i~aspWSp-P~wMk~n~~~~~~~~~~~~l~~~~~~~yA~Yl~~~v~~y~~~Gi~i~~isp~NEP~ 160 (354)
T d2nt0a2 82 PLIHRALQLAQRPVSLLASPWTS-PTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPS 160 (354)
T ss_dssp HHHHHHHHHCSSCCEEEEEESCC-CGGGBTTCSSSSSCBBSSCTTSHHHHHHHHHHHHHHHHHHHTTCCCSEEESCSSGG
T ss_pred HHHHHHHHhcCCCeEEEEcCCCC-chhhhcCCcccCCCCcCCccchhHHHHHHHHHHHHHHHHHHcCCCceEeccCcCcC
Confidence 3444443 3578787776654 56764332211 1111110 014678889999999998652 356899999995
Q ss_pred CCC------C----ChhHHHHHHHH-HHHHHHhcCCC-cEEEEeCCCCCCcchh---hhhcccCcCCCCCEEEEEeecCC
Q 008330 218 GPK------Q----NVKDWYRYMQL-GAEAVHAANPE-VLVILSGLNFDKDLSF---VRNQAVNLTFTGKLVFEAHWYGF 282 (570)
Q Consensus 218 ~~~------~----~~~~W~~~~~~-~~~aIr~~dp~-~lIiVeG~~w~~dl~~---~~~~p~~l~~~~nlVys~H~Y~~ 282 (570)
... . +.++-.+++.+ +..++++.+.. ..|+....++...... +...|-.. .---++.+|.|..
T Consensus 161 ~~~~~~~~~~~~~~t~~~~~~fi~~~L~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~--~~v~~ia~H~Y~~ 238 (354)
T d2nt0a2 161 AGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAA--KYVHGIAVHWYLD 238 (354)
T ss_dssp GGGSTTCCSSCCBCCHHHHHHHHHHTHHHHHHTSTTTTSEEEEEEEEGGGTTHHHHHHHTSHHHH--TTCCEEEEEEETT
T ss_pred cccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCceEEEeeCCcccchHHHHHHHhcCHhHH--HhcCeEEEecCCC
Confidence 321 0 33444555543 56677777654 3444433332221111 11111100 1113789999974
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCCCc--------chHHHHHHHHHHHHHCCCceEE
Q 008330 283 TDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGNNV--------NDNRYLNCFFGVAAELDWDWAL 354 (570)
Q Consensus 283 ~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~~~--------~~~~~~~~~~~~~~~~gigw~~ 354 (570)
... . .......+.+ .-.+.+++++|.+......+. ....+.+.++..+...--+|.+
T Consensus 239 ~~~---------~-~~~~~~~~~~-----~~p~k~~w~TE~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~a~~~ 303 (354)
T d2nt0a2 239 FLA---------P-AKATLGETHR-----LFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTD 303 (354)
T ss_dssp SCC---------C-HHHHHHHHHH-----HCTTSEEEEEEEECCCSTTSCSCCTTCHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CCC---------c-hhHHHHHHHH-----hCCCceEEeeeeccCCCCCCcccccCcHHHHHHHHHHHHHHHHhhhhhhee
Confidence 321 0 0111111111 114789999999765432211 1235567777777754447999
Q ss_pred ecc
Q 008330 355 WTL 357 (570)
Q Consensus 355 W~~ 357 (570)
|.+
T Consensus 304 W~l 306 (354)
T d2nt0a2 304 WNL 306 (354)
T ss_dssp EES
T ss_pred hhh
Confidence 976
|
| >d1dqga_ b.42.2.2 (A:) Mannose receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Cysteine rich domain domain: Mannose receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.77 E-value=0.0007 Score=58.33 Aligned_cols=73 Identities=22% Similarity=0.323 Sum_probs=54.9
Q ss_pred ceeeCCCCceeeeecCC--CCceecCCCCC---CCCccccCCcceeecccceEEeeccC-CccceeccccCCCCCceeEe
Q 008330 412 KVIYHPATGLCVQRKSF--LDPLTLGPCTE---SEAWSYTPHKTISLKGAYFCLQAKHV-GKPAKLGIICTDCGSTWEII 485 (570)
Q Consensus 412 ~~~~~~~tg~c~~~~~~--~~~~~~~~c~~---~~~W~~~~~~~~~~~~~~~cl~a~~~-g~~~~~~~~c~~~~~~W~~~ 485 (570)
..++|+.|++|+.+... ..+|.+.+|+. +++|.+.+...+.+.+..+|+...+. +..+.+ ..|.+.+|+|++.
T Consensus 44 ~~l~~~~s~~CL~~~~~~~g~~v~l~~Cd~~~~~Q~W~~~~~~l~~~~~~~l~l~~~~~~~~~v~l-~~~~~~~q~W~~~ 122 (134)
T d1dqga_ 44 SQIMSVAFKLCLGVPSKTDWASVTLYACDSKSEYQKWECKNDTLFGIKGTELYFNYGNRQEKNIKL-YKGSGLWSRWKVY 122 (134)
T ss_dssp SCEEETTTTEEEECSSSCTTCBCEEECCCTTCTTSCEEECSTTBEEETTSSCEEECCGGGCCSCEE-ESCCSGGGBCEET
T ss_pred CceEecCCCcEEeEeeccCCceEEEEECCCCCccceeEeCCCeEEeecCcceEEeeccCCCceEEE-ecCCcccccceEc
Confidence 46899999999998443 35699999975 36999987767777778888876553 444555 5667888999884
|
| >d1vcla1 b.42.2.1 (A:1-150) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemolytic lectin CEL-III, domains 1 and 2 species: Cucumaria echinata [TaxId: 40245]
Probab=96.69 E-value=0.00068 Score=59.31 Aligned_cols=62 Identities=11% Similarity=0.244 Sum_probs=46.7
Q ss_pred ceeecccceEEeeccC--CccceeccccC-CCCCceeEeeccccEEEEecCCCceEEEeecC--CCceeecce
Q 008330 450 TISLKGAYFCLQAKHV--GKPAKLGIICT-DCGSTWEIISDSKMHLSSKADNGTTVCLDVDS--SNTIVTNTC 517 (570)
Q Consensus 450 ~~~~~~~~~cl~a~~~--g~~~~~~~~c~-~~~~~W~~~s~~~~~~~~~~~~~~~~cld~~~--~~~~~~~~c 517 (570)
.|+-..+++||++.|. |.++.+ ++|. +.+|+|.+.+++.++ . .++.+|||+.+ ++.++...|
T Consensus 12 ~irn~~sg~CLDv~g~~~~~~v~~-~~C~g~~~Q~w~~~~~g~ir--~---~~s~~cLd~~~~~~~~~~~~~~ 78 (150)
T d1vcla1 12 ELRSFKSKQCVDIVGNQGSGNIAT-YDCDGLSDQQIIICGDGTIR--N---EARNYCFTPDGSGNANVMSSPC 78 (150)
T ss_dssp CEEETTTCCEEEESSSSSCEEEEE-ECCCCCGGGSEEEETTSCEE--E---SSSSEEEEESSSSSEEEEEEEC
T ss_pred EEEECCCCccEEcCCCCCCCeeEE-EeccCCcceEEEEEccccEE--E---eccCceEeecCCCCCceEEEEE
Confidence 5777789999999774 555655 9999 778999998888753 2 25789999975 346666665
|
| >d1m2tb1 b.42.2.1 (B:249-384) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: European mistletoe (Viscum album) [TaxId: 3972]
Probab=96.69 E-value=0.00077 Score=57.96 Aligned_cols=65 Identities=17% Similarity=0.273 Sum_probs=51.7
Q ss_pred CceeeeecCC--CCceecCCCCCC----CCccccCCcceeecccceEEeeccC--CccceeccccC-CCCCceeE
Q 008330 419 TGLCVQRKSF--LDPLTLGPCTES----EAWSYTPHKTISLKGAYFCLQAKHV--GKPAKLGIICT-DCGSTWEI 484 (570)
Q Consensus 419 tg~c~~~~~~--~~~~~~~~c~~~----~~W~~~~~~~~~~~~~~~cl~a~~~--g~~~~~~~~c~-~~~~~W~~ 484 (570)
+|.|+++.+. ..++.+.+|.+. ++|.+..++.|..+.+++||++.+. |.++.+ ..|. +++|+|++
T Consensus 60 ~~~cld~~~~~~g~~v~~~~C~~~~~~~q~w~~~~~g~i~n~~s~lcLd~~~~~~g~~v~~-~~c~~~~~Q~W~i 133 (136)
T d1m2tb1 60 NGSCLTTYGYTAGVYVMIFDCNTAVREATIWQIWGNGTIINPRSNLVLAASSGIKGTTLTV-QTLDYTLGQGWLA 133 (136)
T ss_dssp TTEEEEESCSSTTCBEEEEETTTSCGGGGCCEECTTSCEEETTTTEEEECSSCSTTCBCEE-ECCCCCGGGCCEE
T ss_pred CCccccccCCCCCCeEEEEecCCCCCccEEEeEcCCCcEEeccCCeEeccccCCCCCEEEE-EcCCCCccceEEe
Confidence 6899998543 356999999864 4799999888888899999997663 556665 8898 77899996
|
| >d1rzob1 b.42.2.1 (B:2001-2135) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Castor bean (Ricinus communis), Ricin [TaxId: 3988]
Probab=96.68 E-value=0.00063 Score=58.48 Aligned_cols=65 Identities=14% Similarity=0.140 Sum_probs=51.1
Q ss_pred CceeeeecCC----CCceecCCCCCC--CCccccCCcceeecccceEEeeccC--CccceeccccC-CCCCceeE
Q 008330 419 TGLCVQRKSF----LDPLTLGPCTES--EAWSYTPHKTISLKGAYFCLQAKHV--GKPAKLGIICT-DCGSTWEI 484 (570)
Q Consensus 419 tg~c~~~~~~----~~~~~~~~c~~~--~~W~~~~~~~~~~~~~~~cl~a~~~--g~~~~~~~~c~-~~~~~W~~ 484 (570)
++.|++.... ...+.+.+|.++ ++|.++.++.|+.+.+++||++.+. |.++.+ +.|. +++|+|.+
T Consensus 60 ~~~cld~~~~~~~~g~~v~~~~~~~~~~Q~W~~~~~~~i~~~~sg~cLd~~~~~~g~~v~~-~~c~~~~~Q~W~~ 133 (135)
T d1rzob1 60 NGKCLTISKSSPRQQVVIYNCSTATVGATRWQIWDNRTIINPRSGLVLAATSGNSGTKLTV-QTNIYAVSQGWLP 133 (135)
T ss_dssp TTEEEEEECCTTCCEEEEEETTTSCGGGTBCEECTTSBEEETTTTEEEECSCSSTTCBCEE-EECCCCGGGBCBC
T ss_pred cCceeeccCCccCCCeEEEEecCCCCCceeEEEcCCCEEEeCCCCeEEeecCCCCCCEEEE-EcCCCCcccEeec
Confidence 5788887332 245888888873 7999999998888999999998774 566777 7888 77899975
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=96.62 E-value=0.00095 Score=65.79 Aligned_cols=104 Identities=17% Similarity=0.144 Sum_probs=64.1
Q ss_pred CCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCc
Q 008330 49 ENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGI 128 (570)
Q Consensus 49 ~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~ 128 (570)
.+|..|.++|.+|.... ..+|-|.+.+.+-++.|+++|||+|=|+=.++....+.... +..-..|. -+..
T Consensus 13 ~~g~~~~~~~f~w~~~~---~~~~~~~~~i~~kl~yl~~lGv~aIwl~P~~~~~~~~~~~~----~~~~~hgY---~~~d 82 (357)
T d1gcya2 13 HGGDEIILQGFHWNVVR---EAPNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGS----KSGGGEGY---FWHD 82 (357)
T ss_dssp GGGCCCEEECCCTTHHH---HSTTTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC-------CCBCCSST---TCSS
T ss_pred cCCCEEEEeeeecCCCC---CCCCcHHHHHHHHHHHHHHcCCCEEEeCcCeeCCccCCCCC----CCCCCCCc---Chhh
Confidence 37888899999995332 12344556677778999999999999953332211100000 00000000 0111
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEec---CCC
Q 008330 129 QSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDN---HIS 165 (570)
Q Consensus 129 ~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~---H~~ 165 (570)
+..+|.+-. .+.|+++|++|.++||+||||+ |..
T Consensus 83 y~vd~~~Gt---~~df~~LV~~aH~~GI~VIlD~V~NH~~ 119 (357)
T d1gcya2 83 FNKNGRYGS---DAQLRQAASALGGAGVKVLYDVVPNHMN 119 (357)
T ss_dssp SCSCSSSCC---HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred cccCccCCC---HHHHHHHHHHHHhcCCeEEEEEeccccC
Confidence 455776643 4779999999999999999994 654
|
| >d1abrb1 b.42.2.1 (B:1-140) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Abrus precatorius [TaxId: 3816]
Probab=96.46 E-value=0.0017 Score=56.21 Aligned_cols=65 Identities=17% Similarity=0.273 Sum_probs=50.7
Q ss_pred CceeeeecCC--CCceecCCCCCC----CCccccCCcceeecccceEEeeccC--CccceeccccC-CCCCceeE
Q 008330 419 TGLCVQRKSF--LDPLTLGPCTES----EAWSYTPHKTISLKGAYFCLQAKHV--GKPAKLGIICT-DCGSTWEI 484 (570)
Q Consensus 419 tg~c~~~~~~--~~~~~~~~c~~~----~~W~~~~~~~~~~~~~~~cl~a~~~--g~~~~~~~~c~-~~~~~W~~ 484 (570)
+|.|+++.+. .+.+.+..|.+. ..|.+..++.|+-..+++||++.+. |.++.+ ..|. +.+|+|++
T Consensus 65 ~g~cld~~~~~~G~~v~~~~C~~~~~q~~~~~~~~~g~i~n~~sg~cLd~~~~~~g~~v~~-~~c~g~~~Q~W~~ 138 (140)
T d1abrb1 65 NGKCLTTYGYAPGSYVMIYDCTSAVAEATYWEIWDNGTIINPKSALVLSAESSSMGGTLTV-QTNEYLMRQGWRT 138 (140)
T ss_dssp TTEEEEESCSSTTCBEEEECTTTSCGGGSBCEECTTSCEEETTTTEEEECCCSSTTCBCEE-ECCCCCGGGCCEE
T ss_pred cCccccccCCCCCCEEEEEecCCCCCcceEEEeccCceEEeceeeeEecccccCCCCEEEE-EeCCCCccceeec
Confidence 5899998543 356999999986 2577778888887889999998763 555555 8898 77899985
|
| >d1hwmb1 b.42.2.1 (B:3-135) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Sambucus ebulus, ebulin [TaxId: 28503]
Probab=96.34 E-value=0.0019 Score=55.12 Aligned_cols=65 Identities=12% Similarity=0.258 Sum_probs=49.3
Q ss_pred CceeeeecCC--CCceecCCCCCC----CCccccCCcceeecccceEEeecc--CCccceeccccC-CCCCceeE
Q 008330 419 TGLCVQRKSF--LDPLTLGPCTES----EAWSYTPHKTISLKGAYFCLQAKH--VGKPAKLGIICT-DCGSTWEI 484 (570)
Q Consensus 419 tg~c~~~~~~--~~~~~~~~c~~~----~~W~~~~~~~~~~~~~~~cl~a~~--~g~~~~~~~~c~-~~~~~W~~ 484 (570)
++.|++..+. ...+.+..|... ++|.+++++.|..+.+++||++.+ .|.++.+ +.|. +++|+|++
T Consensus 58 ~~~~l~~~~~~~g~~v~~~~c~~~~~~~q~w~~~~~g~i~~~~sg~cLd~~~~~~g~~v~~-~~c~g~~~Q~W~~ 131 (133)
T d1hwmb1 58 MGKCMTANGLNSGSYIMITDCSTAAEDATKWEVLIDGSIINPSSGLVMTAPSGASRTTLLL-ENNIHAASQGWTV 131 (133)
T ss_dssp TTEEEEESSSSTTCBEEEECTTTSCTTSSCCEEETTTEEECTTTCCEEECSCSSTTCBCEE-ECCCCCGGGCCEE
T ss_pred eeeecccCCCCCCCeeEEEecCCCCCceeEEEEcCCCCEEccCCCeEeecccCCCCCEEEE-EcCCCCcccceeC
Confidence 4678776332 245788888764 479999888888888999999866 3566666 8898 77899987
|
| >d1sr4a_ b.42.2.1 (A:) Cytolethal distending toxin subunit A {Haemophilus ducreyi [TaxId: 730]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Cytolethal distending toxin subunit A species: Haemophilus ducreyi [TaxId: 730]
Probab=96.31 E-value=0.0018 Score=58.00 Aligned_cols=76 Identities=17% Similarity=0.291 Sum_probs=55.9
Q ss_pred cceeeCCCCceeeeecCCCCceecCCCCCC---CCccccCCc----ceeecccceEEeeccCC----ccceeccccC-CC
Q 008330 411 HKVIYHPATGLCVQRKSFLDPLTLGPCTES---EAWSYTPHK----TISLKGAYFCLQAKHVG----KPAKLGIICT-DC 478 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~~~~~~~~~c~~~---~~W~~~~~~----~~~~~~~~~cl~a~~~g----~~~~~~~~c~-~~ 478 (570)
++.+....||+|+++.+. .+...+|+.+ ++|.+++.+ .|+-+.+++||++.+.+ .++.+ +.|. +.
T Consensus 70 ~~~i~N~~sg~CLd~~g~--~v~q~~C~~~~~~Q~W~~~~~~~G~~~i~n~~sg~CLdv~~~st~~G~~v~~-~~C~~~~ 146 (167)
T d1sr4a_ 70 YFRFVNQSLGTCVEAYGN--GLIHDICSLDKLAQEFELLPTDSGAVVIKSVSQGRCVTYNPVSTTFYSTVTL-SVCDGAT 146 (167)
T ss_dssp CEEEEETTTCCEEEEETT--EEEEECCCTTCGGGCEEEEEBTTSCEEEEETTTCCEEEECSSCSSSCBCEEE-ECCCCCE
T ss_pred EEEEEECCCCcEEecCCC--cEEEEecCCCChHHeEEEEEecCceEEEEeccccEEEEecCCCCCCCCEEEE-EecCCCC
Confidence 466778999999998654 3788999753 699997543 56667899999999864 34444 8997 33
Q ss_pred C----CceeEeeccc
Q 008330 479 G----STWEIISDSK 489 (570)
Q Consensus 479 ~----~~W~~~s~~~ 489 (570)
+ |+|+++..-+
T Consensus 147 ~~n~~QqW~i~pP~~ 161 (167)
T d1sr4a_ 147 EPSRDQTWYLAPPVL 161 (167)
T ss_dssp ETTEECCEEEECCSS
T ss_pred CCChhhcEEEeCCCc
Confidence 3 8999966543
|
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Probab=96.28 E-value=0.0017 Score=63.14 Aligned_cols=87 Identities=18% Similarity=0.179 Sum_probs=55.0
Q ss_pred EEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccC
Q 008330 53 RVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSN 131 (570)
Q Consensus 53 ~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~ 131 (570)
+|.+++.+|.+.. -+|-+.+.+.+-++.|+++|||+|-| |+... .....|.. ...+..
T Consensus 2 ~~~~~~f~~~~~~----~~~g~~~~i~~kLdyl~~lGv~~i~L~Pi~~~-~~~~gY~~----------------~d~~~i 60 (347)
T d1ht6a2 2 QVLFQGFNWESWK----QSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHS-VSNEGYMP----------------GRLYDI 60 (347)
T ss_dssp CCEEECCCTTGGG----CTTCHHHHHHTTHHHHHHTTCCEEEECCCSCB-SSTTSSSB----------------CCTTCG
T ss_pred eeEEeccccCcCC----CCCCCHHHHHHhHHHHHHcCCCEEEECCCCcC-CCCCCCCc----------------cCcCcC
Confidence 4678999986432 12223345666689999999999999 44321 11111110 011233
Q ss_pred CCCCCCchHHHHHHHHHHHHhcCCCEEEEec
Q 008330 132 NPSIVDLPLIKAFQAVVASLGNNNVMVILDN 162 (570)
Q Consensus 132 nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~ 162 (570)
+|...+ -++.|+++|++|.++||+||||+
T Consensus 61 d~~~~G--~~~~f~~lv~~~H~~gi~VilD~ 89 (347)
T d1ht6a2 61 DASKYG--NAAELKSLIGALHGKGVQAIADI 89 (347)
T ss_dssp GGCTTC--CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcccCC--CHHHHHHHHHHHhhcceEEeeec
Confidence 453222 25789999999999999999996
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=95.42 E-value=0.0077 Score=60.27 Aligned_cols=94 Identities=16% Similarity=0.159 Sum_probs=55.0
Q ss_pred EEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEe-cccccccccC-ccccchhhhhhhhccchhhccCcccC
Q 008330 54 VKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLATND-SLASLTVRQSFQKLGLLEAIGGIQSN 131 (570)
Q Consensus 54 v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~-~~~n~tv~~s~~~lg~~~~~~g~~~~ 131 (570)
|.|++.+|....+ .| +.+.+.+-++.|+++|||+|-| |+....-..+ .|. +..-+ .+.+ .......
T Consensus 4 ~~~~~f~w~~~~~----gg-~~~gi~~kLdylk~LGvtaI~L~Pi~~~~~~~~~gy~---~~~~Y---~~~~-~~~~~~v 71 (393)
T d1e43a2 4 TLMQYFEWYTPND----GQ-HWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYG---PYDLY---DLGE-FQQKGTV 71 (393)
T ss_dssp CEEECCCTTCCSS----SC-HHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSS---EEETT---CSSC-SCBTTBS
T ss_pred cEEEeEecCCCCC----CC-CHHHHHHHHHHHHHcCCCEEEeCcCccCCCCCCCCCC---cccCc---cccc-ccccCcc
Confidence 4678888865432 23 2356677799999999999999 5432111000 010 00000 0000 0000123
Q ss_pred CCCCCCchHHHHHHHHHHHHhcCCCEEEEec
Q 008330 132 NPSIVDLPLIKAFQAVVASLGNNNVMVILDN 162 (570)
Q Consensus 132 nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~ 162 (570)
+|.+-. .+.|+++|++|.++||+||+|+
T Consensus 72 d~~~Gt---~~df~~Lv~~~H~~Gi~VilD~ 99 (393)
T d1e43a2 72 RTKYGT---KSELQDAIGSLHSRNVQVYGDV 99 (393)
T ss_dssp SCSSCC---HHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCC---HHHHHHHHHHHHHcCCEEEEEE
Confidence 555543 5789999999999999999997
|
| >d1qxma1 b.42.2.1 (A:4-148) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=95.33 E-value=0.008 Score=52.22 Aligned_cols=73 Identities=11% Similarity=0.048 Sum_probs=53.8
Q ss_pred cceeeCCCCceeeeecC-CCCceecCCCCCC--CCcccc---CCc--cee-ecccceEEeeccCCccceeccccC-CCCC
Q 008330 411 HKVIYHPATGLCVQRKS-FLDPLTLGPCTES--EAWSYT---PHK--TIS-LKGAYFCLQAKHVGKPAKLGIICT-DCGS 480 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~-~~~~~~~~~c~~~--~~W~~~---~~~--~~~-~~~~~~cl~a~~~g~~~~~~~~c~-~~~~ 480 (570)
++.+....+|.|+.... ....+.++.|.++ ++|... +.+ .|+ ++++++||+..| |.++.+ +.|. +.+|
T Consensus 55 ~Y~I~~~~s~~~l~~~~~~g~~v~~~~~~g~~~Q~W~i~~~~~~g~y~I~n~~ns~~vLDv~g-g~~v~~-~~~~g~~nQ 132 (145)
T d1qxma1 55 AYKIKVMDNTSLILTWNAPLSSVSVKTDTNGDNQYWYLLQNYISRNVIIRNYMNPNLVLQYNI-DDTLMV-STQTSSSNQ 132 (145)
T ss_dssp EEEEEESSSSCCEEEECTTSSCEEEECCCCCGGGCEEEEECTTTCCEEEEESSCTTEEEEECT-TSCEEE-EECCSCGGG
T ss_pred EEEEEECCCCCEEEeccCCCceEEEEcCCCCchheEEEeecCCCCEEEEEEccCCCEEEEecC-CceEEE-eCCCCCccc
Confidence 56778888998888733 2356899999987 699874 333 344 346899999987 556555 8888 8899
Q ss_pred ceeEe
Q 008330 481 TWEII 485 (570)
Q Consensus 481 ~W~~~ 485 (570)
+|++-
T Consensus 133 ~w~~~ 137 (145)
T d1qxma1 133 FFKFS 137 (145)
T ss_dssp CEEEE
T ss_pred EEEEe
Confidence 99983
|
| >d2bvya2 c.1.8.3 (A:5-370) Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Cellulomonas fimi [TaxId: 1708]
Probab=95.31 E-value=0.63 Score=45.87 Aligned_cols=199 Identities=11% Similarity=0.099 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHhcCCCEEEEecCCCCCCccccCCCCCCCCCCCC----------CCHHHHHHHHHHH---HHHhCCCCc
Q 008330 140 LIKAFQAVVASLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQY----------FNPDLWIKGLTKM---ATIFNGVRN 206 (570)
Q Consensus 140 ~l~~ld~vV~~a~~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~----------~~~~~~~~~w~~i---A~ryk~~p~ 206 (570)
.++.+.+.+..+.++|-.|.+..|...|.+. ..+|.... ...+++...++.| |...|+...
T Consensus 86 ~~~~~~~~~~~~~~~Ggivt~~wH~~nP~~g------~~~~~~~~~~~~~vlpg~~~~~~~~~~l~~ia~~a~~Lk~~~~ 159 (366)
T d2bvya2 86 NIALFADYIRKADAIGGVNTVSAHVENFVTG------GSFYDTSGDTLRAVLPGGSHHAELVAYLDDIAELADASRRDDG 159 (366)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEECCCCCTTTS------CCTTCCTTCHHHHHSTTSTTHHHHHHHHHHHHHHHHHCBCTTS
T ss_pred hHHHHHHHHHHhhccCCEEEEEEecCCCCCC------CcccCCchhHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhccC
Confidence 3455666667777889999999998776432 22332210 1235565555555 445665332
Q ss_pred ---EEEEeccCCCCCCC-------CChhHHHHHHHHHHHHHHhc-CCCcEEEEeCCC--CCCcch-hhhhcccCcCCCC-
Q 008330 207 ---VVGMSLRNELRGPK-------QNVKDWYRYMQLGAEAVHAA-NPEVLVILSGLN--FDKDLS-FVRNQAVNLTFTG- 271 (570)
Q Consensus 207 ---Vig~dL~NEP~~~~-------~~~~~W~~~~~~~~~aIr~~-dp~~lIiVeG~~--w~~dl~-~~~~~p~~l~~~~- 271 (570)
-|.|-.+.|..+.+ .+.+++.+..+.+++.+|.. +-+.+|.|=.++ .+.+.. .+...| -|+
T Consensus 160 ~~VPVl~Rp~HE~nG~WfwWg~~~~~p~~y~~lwr~~~d~l~~~~g~~Nliwvwsp~~~~~~~~~~~~~~YP----GDdy 235 (366)
T d2bvya2 160 TLIPIVFRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYP----GDAF 235 (366)
T ss_dssp CBCCEEEECSTTTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHHTSCCCSEEEEECCCSCCTTCHHHHGGGCC----CTTT
T ss_pred CCccEEEeechhcCCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCcceEEEeecCCCCCcccchhhhhCC----CCCe
Confidence 24499999998874 25688999999999999975 567888873322 111111 122233 111
Q ss_pred CEEEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCCC--CcchHHHHHHHHHHHHHCC
Q 008330 272 KLVFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRGN--NVNDNRYLNCFFGVAAELD 349 (570)
Q Consensus 272 nlVys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~~--~~~~~~~~~~~~~~~~~~g 349 (570)
=-|..+-.|..... ...-+.+...+.....+..+++.|+.|+|+|...... ...+..|++.+++.+.+..
T Consensus 236 VDivG~D~Y~~~~~--------~~~~~~~~~~l~~~~~~a~~~~Kp~altE~G~~~~~~~~~~~~~~W~~~~l~~i~~~~ 307 (366)
T d2bvya2 236 VDVLGLDTYDSTGS--------DAFLAGLVADLRMIAEIADEKGKVSAFTEFGVSGGVGTNGSSPAQWFTKVLAAIKADP 307 (366)
T ss_dssp CSEECCEEEESSCC--------HHHHHHHHHHHHHHHHHHHHHTCEECBCEEEETTCSSTTSCCCTTHHHHHHHHHHHST
T ss_pred EEEEEEeccCCCCC--------cchHHHHHHHHHHHHHHHHhcCCcEEEeceeccCCccccCCCcchHHHHHHHHHHhCc
Confidence 12455555643321 1111223333332233334478999999999864322 1234689999999998873
Q ss_pred ----CceE-Eec
Q 008330 350 ----WDWA-LWT 356 (570)
Q Consensus 350 ----igw~-~W~ 356 (570)
+.|+ .|.
T Consensus 308 ~~~~~~y~~~W~ 319 (366)
T d2bvya2 308 VASRNAYMETWA 319 (366)
T ss_dssp TTTCCSEEEECC
T ss_pred cccceeEEEEec
Confidence 4664 675
|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.21 E-value=0.0093 Score=59.71 Aligned_cols=91 Identities=13% Similarity=0.088 Sum_probs=54.9
Q ss_pred CCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCc
Q 008330 49 ENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGI 128 (570)
Q Consensus 49 ~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~ 128 (570)
..|+.|.|++..|. |..-+++..+.|+++||++|=||=..+...... .-..+.. |. -+..
T Consensus 7 ~~g~~~i~~~f~w~-----------~~~i~~e~~~yL~~lG~taIwl~P~~e~~~~~~----~~~~~y~--gY---~~~d 66 (403)
T d1hx0a2 7 QSGRTSIVHLFEWR-----------WVDIALECERYLGPKGFGGVQVSPPNENIVVTN----PSRPWWE--RY---QPVS 66 (403)
T ss_dssp CTTCCEEEEETTCC-----------HHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTT----TTSCGGG--GG---SBSC
T ss_pred CCCCeeEEEeecCc-----------HHHHHHHHHHHHHHhCCCEEEeCcCccCccCCC----CCCCCce--ee---cCCC
Confidence 36778889998883 222234455679999999999943222111100 0000100 00 0111
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEec
Q 008330 129 QSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDN 162 (570)
Q Consensus 129 ~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~ 162 (570)
|..+|.+-. .+-|+++|++|.++||+||||+
T Consensus 67 Y~v~~~~Gt---~~dfk~Lv~~aH~~GI~VIlDv 97 (403)
T d1hx0a2 67 YKLCTRSGN---ENEFRDMVTRCNNVGVRIYVDA 97 (403)
T ss_dssp SCSCBTTBC---HHHHHHHHHHHHHTTCEEEEEE
T ss_pred CccCCCCCC---HHHHHHHHHHHHhcCCEEEEEE
Confidence 456676543 4679999999999999999995
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.09 E-value=0.012 Score=58.70 Aligned_cols=93 Identities=9% Similarity=0.059 Sum_probs=53.2
Q ss_pred EEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEe-ccccccccc--CccccchhhhhhhhccchhhccCccc
Q 008330 54 VKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLATN--DSLASLTVRQSFQKLGLLEAIGGIQS 130 (570)
Q Consensus 54 v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~--~~~~n~tv~~s~~~lg~~~~~~g~~~ 130 (570)
|.|+|..|.... ..|+ .+.+.+-++.|+++|+|+|-| |+... ... ..|. +..-++ . ........
T Consensus 7 ~~~~~f~w~~~~----~~~~-~~~i~~kLdyLk~LGv~aI~L~Pi~~~-~~~~~~GY~---~~d~y~---~-~~~~~~~~ 73 (393)
T d1hvxa2 7 TMMQYFEWYLPD----DGTL-WTKVANEANNLSSLGITALWLPPAYKG-TSRSDVGYG---VYDLYD---L-GEFNQKGA 73 (393)
T ss_dssp CEEECCCTTCCS----SSCH-HHHHHHHHHHHHHTTCCEEEECCCSEE-SSTTCCSSS---EEETTC---S-SCSCBTTB
T ss_pred eEEEeEeeccCC----CCCh-HHHHHHHHHHHHHcCCCEEEECCCCcC-CCCCCCCCC---ccCccc---c-ccccccCC
Confidence 457788886532 1122 256778889999999999999 44321 110 0011 000000 0 00000012
Q ss_pred CCCCCCCchHHHHHHHHHHHHhcCCCEEEEec
Q 008330 131 NNPSIVDLPLIKAFQAVVASLGNNNVMVILDN 162 (570)
Q Consensus 131 ~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~ 162 (570)
.+|.+- -.+.|+++|++|.++||+||||+
T Consensus 74 vd~~~G---t~~df~~LV~~aH~~GIkVIlDv 102 (393)
T d1hvxa2 74 VRTKYG---TKAQYLQAIQAAHAAGMQVYADV 102 (393)
T ss_dssp SSCSSC---CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCC---CHHHHHHHHHHHHHCCCEEEEEE
Confidence 355543 24679999999999999999994
|
| >d1qxma2 b.42.2.1 (A:149-286) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=95.04 E-value=0.013 Score=50.07 Aligned_cols=62 Identities=13% Similarity=-0.016 Sum_probs=46.0
Q ss_pred cccceEEeeccCCccceeccccC-CCCCceeEeecccc-EEEEecCCCceEEEeecC-CC-ceeecce
Q 008330 454 KGAYFCLQAKHVGKPAKLGIICT-DCGSTWEIISDSKM-HLSSKADNGTTVCLDVDS-SN-TIVTNTC 517 (570)
Q Consensus 454 ~~~~~cl~a~~~g~~~~~~~~c~-~~~~~W~~~s~~~~-~~~~~~~~~~~~cld~~~-~~-~~~~~~c 517 (570)
..+++||+....|.++.+ ++|. +++|+|+++.++.- .... ....+..|||+.. +| .|+...|
T Consensus 10 ~n~~k~l~~~~n~~~v~~-w~~~~~~nQ~W~~~~~~~~~~y~i-~~~~~~~~l~~~~~~g~~v~~~~~ 75 (138)
T d1qxma2 10 LNSDRFLSKNLNSQIIVL-WQWFDSSRQKWIIEYNETKSAYTL-KCQENNRYLTWIQNSNNYVETYQS 75 (138)
T ss_dssp TCTTCEEEECTTSSBEEE-ECCCCCGGGCEEEEEETTTTEEEE-EETTTTEEEEECCSTTCBEEEECC
T ss_pred eCCCEEEEEccCCceEEE-ECCCCCcccCEEEEECCCcCEEEE-EeCCCCCEEccccCCCcEEEEEcC
Confidence 578899999888998877 9999 78999999887642 1222 2335789999974 55 5666775
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=95.00 E-value=0.011 Score=58.81 Aligned_cols=90 Identities=16% Similarity=0.184 Sum_probs=56.3
Q ss_pred CCCCEEEEEEeeCCCCCCccccCCCCCChHHHHHH-HHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhcc
Q 008330 49 ENGHRVKLACVNWVSHLEPVVAEGLSKQPMDMLSK-RVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIG 126 (570)
Q Consensus 49 ~~G~~v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~-~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~ 126 (570)
+.|+.|.|++.+|. | +.+++-+. .|+++||++|=| |+....... .. .+.... -+
T Consensus 7 ~~~~~~i~~~f~W~-----------~-~~i~~~~~~yl~~lG~tai~l~P~~e~~~~~-~~------~~~~~Y-----~~ 62 (378)
T d1jaea2 7 ASGRNSIVHLFEWK-----------W-NDIADECERFLQPQGFGGVQISPPNEYLVAD-GR------PWWERY-----QP 62 (378)
T ss_dssp CTTCEEEEEETTCC-----------H-HHHHHHHHHTTTTTTEEEEECCCCSCBBCCT-TC------CGGGGG-----SB
T ss_pred CCCCceEEEeccCc-----------H-HHHHHHHHHHHHHhCCCEEEeCcccccCCCC-CC------CCcccc-----CC
Confidence 47888999999983 2 34555555 499999999999 443222111 00 000000 00
Q ss_pred CcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEe---cCCC
Q 008330 127 GIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILD---NHIS 165 (570)
Q Consensus 127 g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD---~H~~ 165 (570)
..|..+|.+- -.+-|+++|++|.++||+|||| +|..
T Consensus 63 ~dY~id~~~G---t~~df~~LV~~aH~~GI~VilDvV~NH~~ 101 (378)
T d1jaea2 63 VSYIINTRSG---DESAFTDMTRRCNDAGVRIYVDAVINHMT 101 (378)
T ss_dssp CCSCSEETTE---EHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred ccceeCCCCC---CHHHHHHHHHHHHhcCceeeeeecccccc
Confidence 1134455543 3577999999999999999999 5764
|
| >d2ihoa1 b.42.2.1 (A:2-155) Agglutinin MOA, N-terminal domain {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Agglutinin MOA, N-terminal domain species: Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]
Probab=94.89 E-value=0.0086 Score=51.92 Aligned_cols=73 Identities=11% Similarity=0.041 Sum_probs=51.7
Q ss_pred cceeeCCCCceeeeecCC----CCceecCCCCC-----CCCccccCCc-----ceeecccceEEeeccC----Cccceec
Q 008330 411 HKVIYHPATGLCVQRKSF----LDPLTLGPCTE-----SEAWSYTPHK-----TISLKGAYFCLQAKHV----GKPAKLG 472 (570)
Q Consensus 411 ~~~~~~~~tg~c~~~~~~----~~~~~~~~c~~-----~~~W~~~~~~-----~~~~~~~~~cl~a~~~----g~~~~~~ 472 (570)
.+.+....||+|+++... .+++.++.|.. +++|.+++.+ .|.-+.+++||+..+. |.++.+
T Consensus 58 ~y~i~n~~s~~~l~~~~~~~~~g~~v~~~~~~~~~~~~~Q~W~~~~~~~g~~y~i~n~~sg~~Ldv~~~~~~~gt~i~~- 136 (154)
T d2ihoa1 58 TFTLCNLFSGTYMDLYNGSSEAGTAVNGWQGTAFTTNPHQLWTIKKSSDGTSYKIQNYGSKTFVDLVNGDSSDGAKIAG- 136 (154)
T ss_dssp EEEEEETTTCCEEEEGGGCCSTTEEEEEECCCTTCCCGGGCEEEEECTTSSSEEEEETTTCCEEEEGGGCCSTTEEEEE-
T ss_pred eEEEEEcCCCeEEeccCCcCCCCcEEEEEeecccCCCcccEEEEccCCCcceEEEEEcCCCcEEEcCCCCcCCCcEEEE-
Confidence 456778999999998442 35688887754 3699987544 3666789999998763 444443
Q ss_pred cccC----CCCCceeE
Q 008330 473 IICT----DCGSTWEI 484 (570)
Q Consensus 473 ~~c~----~~~~~W~~ 484 (570)
++|. +++|+|.+
T Consensus 137 w~~~~~~g~~~Q~W~f 152 (154)
T d2ihoa1 137 WTGTWDEGNPHQKWYF 152 (154)
T ss_dssp ECCCSSCCCGGGCEEE
T ss_pred EecccCCCCccceEEE
Confidence 6773 67799986
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Probab=94.78 E-value=0.016 Score=56.31 Aligned_cols=81 Identities=11% Similarity=0.083 Sum_probs=47.5
Q ss_pred CCCCChHHHHHHHHHHcCCcEEEe-ccccccc-ccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHH
Q 008330 72 GLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLA-TNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVA 149 (570)
Q Consensus 72 Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~-~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~ 149 (570)
|-+.+.+.+-++.||++|+|+|-| |+....- .+..|.. ..-+. + ....+.+..+|.+-. .+.|+++|+
T Consensus 19 ~~~~~~i~~kLdyLk~LGvt~I~l~Pi~~~~~~~~~gY~~---~d~~~-~---~~~~~~~~vd~~~Gt---~~efk~lV~ 88 (390)
T d1ud2a2 19 GQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGA---YDLYD-L---GEFNQKGTVRTKYGT---KAQLERAIG 88 (390)
T ss_dssp SCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSE---EETTC-S---SCSCBTTBSSCSSCC---HHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCc---cCCcc-c---ccccccCCcCCCCCC---HHHHHHHHH
Confidence 434456777789999999999999 5532110 0101110 00000 0 000011234555532 578999999
Q ss_pred HHhcCCCEEEEec
Q 008330 150 SLGNNNVMVILDN 162 (570)
Q Consensus 150 ~a~~~Gl~VILD~ 162 (570)
+|.++||+||||+
T Consensus 89 ~~H~~GI~VilDv 101 (390)
T d1ud2a2 89 SLKSNDINVYGDV 101 (390)
T ss_dssp HHHHTTCEEEEEE
T ss_pred HHHhcCCceEEEE
Confidence 9999999999995
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Probab=94.74 E-value=0.02 Score=56.42 Aligned_cols=93 Identities=10% Similarity=0.030 Sum_probs=54.4
Q ss_pred EEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEe-cccccccc---cCccccchhhhhhhhccchhhccCcc
Q 008330 54 VKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLAT---NDSLASLTVRQSFQKLGLLEAIGGIQ 129 (570)
Q Consensus 54 v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~---~~~~~n~tv~~s~~~lg~~~~~~g~~ 129 (570)
|.|+|.+|.... ..|+| +.+.+-++.||++|+|+|=| |+... .. ...|... .+ ..+.+. ....
T Consensus 11 ~~~q~f~w~~~~----~~~~~-~gi~~kLdylk~LGv~~Iwl~Pv~~~-~~~~~~~gY~~~----dy--~~~~~~-~~~~ 77 (361)
T d1mxga2 11 VIMQAFYWDVPG----GGIWW-DHIRSKIPEWYEAGISAIWLPPPSKG-MSGGYSMGYDPY----DY--FDLGEY-YQKG 77 (361)
T ss_dssp CEEECCCTTCCC----SSCHH-HHHHHHHHHHHHHTCCEEECCCCSEE-TTGGGCCSSSEE----ET--TCSSCS-CBTT
T ss_pred EEEEeeecCCCC----CCchH-HHHHHHHHHHHhcCCCEEEeCcCeeC-CCCCCCCCCCcc----cc--cccCcc-cccc
Confidence 457888886432 11222 56788899999999999998 44321 11 0111100 00 000000 0001
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEec
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDN 162 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~ 162 (570)
..+|.+-+ .+-|+++|++|.++||+||||+
T Consensus 78 ~vd~~~Gt---~~d~~~LV~~aH~~GikVIlD~ 107 (361)
T d1mxga2 78 TVETRFGS---KEELVRLIQTAHAYGIKVIADV 107 (361)
T ss_dssp BSSCSSCC---HHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCCC---HHHHHHHHHHHHHCCCEEEEEe
Confidence 34565543 4679999999999999999994
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=94.43 E-value=0.023 Score=56.45 Aligned_cols=94 Identities=17% Similarity=0.125 Sum_probs=53.6
Q ss_pred EEEEEeeCCCCCCccccCCCCCChHHHHHHHHHHcCCcEEEe-ccccccccc-CccccchhhhhhhhccchhhccCcccC
Q 008330 54 VKLACVNWVSHLEPVVAEGLSKQPMDMLSKRVVDMGFNCVRL-TWPLYLATN-DSLASLTVRQSFQKLGLLEAIGGIQSN 131 (570)
Q Consensus 54 v~L~GVNw~g~~~~~v~~Gl~~~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~-~~~~n~tv~~s~~~lg~~~~~~g~~~~ 131 (570)
|.|.|.+|.... .|-+-+.+.+-++.|+++|+|+|=| |+....-.. ..|.. ..-+ .+.. .......
T Consensus 4 ~~~q~f~w~~~~-----~g~~~~~i~~kLdyL~~LGv~aIwL~Pi~~~~~~~~~gY~~---~~~y---d~~~-~~~~~~v 71 (394)
T d2d3na2 4 TMMQYFEWYLPN-----DGNHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGA---YDLY---DLGE-FNQKGTV 71 (394)
T ss_dssp CEEECCCTTCCS-----SSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSE---EETT---CSSC-SCBTTBS
T ss_pred cEEEEEecccCC-----CCCcHHHHHHHHHHHHHcCCCEEEECcCccCCCCCCCCCCc---ccCc---cccc-ccccCCc
Confidence 457788886542 2322256778889999999999998 443211000 00110 0000 0000 0000123
Q ss_pred CCCCCCchHHHHHHHHHHHHhcCCCEEEEec
Q 008330 132 NPSIVDLPLIKAFQAVVASLGNNNVMVILDN 162 (570)
Q Consensus 132 nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~ 162 (570)
+|.+- -.+.|+++|++|.++||+||||+
T Consensus 72 d~~~G---t~~df~~Lv~~aH~~GIkVilDv 99 (394)
T d2d3na2 72 RTKYG---TRSQLQAAVTSLKNNGIQVYGDV 99 (394)
T ss_dssp SBTTB---CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCC---CHHHHHHHHHHHHHCCCEEEEEE
Confidence 44443 25779999999999999999995
|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=94.42 E-value=0.012 Score=59.03 Aligned_cols=147 Identities=10% Similarity=0.076 Sum_probs=75.1
Q ss_pred HHHHHHHHHHcCCcEEEe-ccccccccc-CccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATN-DSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~-~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
+.+-++.|+++|+|+|-| |+....-.. ..|. + ...+..+|.+. ..+-|+++|++|.++|
T Consensus 36 ~~~~ldyl~~LGv~~i~L~Pv~~~~~~~~~GY~---~-------------~d~~~vdp~~G---~~~d~~~lv~~aH~~g 96 (420)
T d2bhua3 36 AAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYD---G-------------AAFYAPYAPYG---RPEDLMALVDAAHRLG 96 (420)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEECSSSCCCSTT---C-------------CEEEEECGGGC---CHHHHHHHHHHHHHTT
T ss_pred HHHhHHHHHHcCCCEEEeCCCCcCCCCCCCCCC---c-------------ccCCCcCcccC---CHHHHHHHHHHHHhcc
Confidence 445578999999999998 553211000 0111 0 00123455553 3577999999999999
Q ss_pred CEEEEe---cCCCCC-CccccCCC-------CCCCCCCC-CCCHH---HHHHHHHHHHHHhCCCCcEEEEeccCCCCCCC
Q 008330 156 VMVILD---NHISKP-GWCCSNSD-------GNGFFGDQ-YFNPD---LWIKGLTKMATIFNGVRNVVGMSLRNELRGPK 220 (570)
Q Consensus 156 l~VILD---~H~~~~-~w~~~~~d-------gng~~~d~-~~~~~---~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~ 220 (570)
|+|||| +|.... .|...... ..+|-.|- +.+++ .+++..+...+.| +...+= +|..+--...
T Consensus 97 i~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~dlN~~np~v~~~~~~~~~~Wl~~~-GVDGfR-~D~~~~l~~~- 173 (420)
T d2bhua3 97 LGVFLDVVYNHFGPSGNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDY-HFDGLR-LDATPYMTDD- 173 (420)
T ss_dssp CEEEEEECCSCCCSSSCCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHH-CCSEEE-ETTGGGCCCC-
T ss_pred ccccccccccccCCCCccccccccccccccccccccccccccChHHHHHHHHHhheeeecc-cccEEE-Eeeeeeeccc-
Confidence 999999 465432 12100000 00110010 11222 2333333333322 334433 5654332111
Q ss_pred CChhHHHHHHHHHHHHHHhcCCCcEEEEeC
Q 008330 221 QNVKDWYRYMQLGAEAVHAANPEVLVILSG 250 (570)
Q Consensus 221 ~~~~~W~~~~~~~~~aIr~~dp~~lIiVeG 250 (570)
. +.....++.++|++.+|+.+++.|.
T Consensus 174 -~---~~~~~~~~~~~~~~~~p~~~~i~E~ 199 (420)
T d2bhua3 174 -S---ETHILTELAQEIHELGGTHLLLAED 199 (420)
T ss_dssp -S---SSCHHHHHHHHHHTTCSCCEEEEEC
T ss_pred -c---ccccHHHHHHHHHhhcCCceeeecc
Confidence 0 1112345678899999999998885
|
| >d1odza_ c.1.8.3 (A:) Mannanase A, ManA {Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
Probab=94.39 E-value=0.5 Score=46.91 Aligned_cols=200 Identities=13% Similarity=0.103 Sum_probs=110.5
Q ss_pred HHHHHHHHhcCCCEEEEecCCCCCCcccc---CCCCCCCCCCC---------CCCHHHHHHHHHHHHHH---hCCCC---
Q 008330 144 FQAVVASLGNNNVMVILDNHISKPGWCCS---NSDGNGFFGDQ---------YFNPDLWIKGLTKMATI---FNGVR--- 205 (570)
Q Consensus 144 ld~vV~~a~~~Gl~VILD~H~~~~~w~~~---~~dgng~~~d~---------~~~~~~~~~~w~~iA~r---yk~~p--- 205 (570)
.+.++++ .++|-.|.|..|...|.-..+ ...+ ..|... ....+.|.+.++.||.. .++..
T Consensus 84 ~~~~~~~-~~~GgIvt~~WH~~~P~~~~~~~~~~~~-~~~d~~~~v~~~lpg~~~~~~~~~~ld~ia~~~~~L~~~~~~~ 161 (381)
T d1odza_ 84 VAQVKKA-YARGGIITVSSHFDNPKTDTQKGVWPVG-TSWDQTPAVVDSLPGGAYNPVLNGYLDQVAEWANNLKDEQGRL 161 (381)
T ss_dssp HHHHHHH-HHTTCEEEEECCCCCTTTGGGCSSTTTT-STTCCSCCSTTTSTTSTTHHHHHHHHHHHHHHHHTCBCTTSCB
T ss_pred HHHHHHH-HHCCCeEEEEEeeCCCCCCCCCccccCC-cccchhhhHhhcCCCCchhHHHHHHHHHHHHHHHHhhhccCCC
Confidence 4455555 467889999999876521000 0000 011100 01246677777777774 44432
Q ss_pred cEEEEeccCCCCCCC-------CChhHHHHHHHHHHHHHHhc-CCCcEEEEeCCCC--CCc-chhhhhcccCcCCCC-CE
Q 008330 206 NVVGMSLRNELRGPK-------QNVKDWYRYMQLGAEAVHAA-NPEVLVILSGLNF--DKD-LSFVRNQAVNLTFTG-KL 273 (570)
Q Consensus 206 ~Vig~dL~NEP~~~~-------~~~~~W~~~~~~~~~aIr~~-dp~~lIiVeG~~w--~~d-l~~~~~~p~~l~~~~-nl 273 (570)
--|.|-...|-.+.+ .+.+++.+..+.+++++|+. +-+.+|.+=.++- ... -......| -++ =-
T Consensus 162 vPVl~Rp~hE~nG~WfwWg~~~~~p~~y~~lwr~~~~~l~~~~g~~Nliwv~sp~~~~~~~~~~~~~~YP----GDdyVD 237 (381)
T d1odza_ 162 IPVIFRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPNNFWDVTEANYLERYP----GDEWVD 237 (381)
T ss_dssp CCEEEECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBCCSSCCHHHHHSSCC----CTTTCS
T ss_pred ccEEEeeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCCCccccccccCC----CCCeEE
Confidence 123499999998874 14678999999999999975 5678888743321 111 01112222 111 13
Q ss_pred EEEEeecCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHhcCCCeEEeccccCCCC--CCcchHHHHHHHHHHHHHC---
Q 008330 274 VFEAHWYGFTDGQAWVDGNPNQVCGRVVDNVMRLSGFLLEQGWPLFVSEFGADLRG--NNVNDNRYLNCFFGVAAEL--- 348 (570)
Q Consensus 274 Vys~H~Y~~~~~~~w~~~~~~~~~~~~~~~~~~~~g~l~~~g~Pv~iGEFG~~~~~--~~~~~~~~~~~~~~~~~~~--- 348 (570)
|..+-.|.+... .....+.+...+.....+..+++.|+.|+|+|....+ ....+..|.+.+++.+++.
T Consensus 238 ivG~D~Y~~~~~-------~~~~~~~~~~~l~~~~~~A~~~gKp~altE~G~~~~~~~~~~~~~~W~~~~l~~i~~~p~~ 310 (381)
T d1odza_ 238 VLGFDTYGPVAD-------NADWFRNVVANAALVARMAEARGKIPVISGIGIRAPDIEAGLYDNQWYRKLISGLKADPDA 310 (381)
T ss_dssp EECCEEEECSSS-------CHHHHHHHHHHHHHHHHHHHHHTCEECBCEEEECHHHHHTTCCCTTHHHHHHHHHHHSTTG
T ss_pred EEEeeccCCCCC-------chhHHHHHHHHHHHHHHHHHhcCCceeeeeccccCCchhccCcccchHHHHHHHHHhCccc
Confidence 456666654321 0011122333333333444458999999999974311 1112568999999999886
Q ss_pred -CCceE-Eec
Q 008330 349 -DWDWA-LWT 356 (570)
Q Consensus 349 -gigw~-~W~ 356 (570)
.+.|+ .|.
T Consensus 311 ~~i~y~~~W~ 320 (381)
T d1odza_ 311 REIAFLLVWR 320 (381)
T ss_dssp GGCSEEEECC
T ss_pred ccceEEEEEe
Confidence 46655 554
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=94.24 E-value=0.21 Score=48.69 Aligned_cols=68 Identities=15% Similarity=0.231 Sum_probs=45.2
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|++||+|+|-| |+.... ....|.. ...+..+|.+.. .+.++++|++|.++||
T Consensus 55 i~~kLdyl~~lGi~~I~l~Pv~~~~-~~~gY~~----------------~~~~~vd~~~Gt---~~d~~~lv~~~H~~Gi 114 (382)
T d1wzla3 55 VIDRLPYLEELGVTALYFTPIFASP-SHHKYDT----------------ADYLAIDPQFGD---LPTFRRLVDEAHRRGI 114 (382)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEECS-SSSCCSC----------------SEEEEECTTTCC---HHHHHHHHHHHHTTTC
T ss_pred HHHhhHHHHHCCCCEEEECCcCCCC-cccCCcc----------------ccccccccCCCC---HHHHHHHHHHHHhccc
Confidence 455578999999999998 653210 0001110 011344666643 4678999999999999
Q ss_pred EEEEe---cCCC
Q 008330 157 MVILD---NHIS 165 (570)
Q Consensus 157 ~VILD---~H~~ 165 (570)
+||+| +|..
T Consensus 115 ~vilD~V~NH~s 126 (382)
T d1wzla3 115 KIILDAVFNHAG 126 (382)
T ss_dssp EEEEEECCSBCC
T ss_pred ceEeeeeecccc
Confidence 99999 6765
|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]
Probab=94.17 E-value=0.042 Score=53.74 Aligned_cols=71 Identities=13% Similarity=0.086 Sum_probs=45.3
Q ss_pred HHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEE
Q 008330 79 DMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMV 158 (570)
Q Consensus 79 ~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~V 158 (570)
++..+.|+++||++|=||=..+....++ +.. |.. +..|..+|.+-. .+.|+++|++|.++||+|
T Consensus 18 ~~~~dyl~~lG~tai~l~P~~~~~~~~~--------~y~--gY~---~~dy~vd~~~Gt---~~dfk~LV~~aH~~GI~V 81 (354)
T d1g94a2 18 QECEQYLGPKGYAAVQVSPPNEHITGSQ--------WWT--RYQ---PVSYELQSRGGN---RAQFIDMVNRCSAAGVDI 81 (354)
T ss_dssp HHHHHTHHHHTCCEEEECCCSCBBCSSS--------GGG--GGS---BSCSCSCBTTBC---HHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCCCEEEeCcCccCCCCCC--------Ccc--cCC---CCcceeCCCCCC---HHHHHHHHHHHhccCcee
Confidence 4555679999999999943333222110 000 000 011456776653 467999999999999999
Q ss_pred EEec---CCC
Q 008330 159 ILDN---HIS 165 (570)
Q Consensus 159 ILD~---H~~ 165 (570)
|||+ |..
T Consensus 82 ilDvV~NH~~ 91 (354)
T d1g94a2 82 YVDTLINHMA 91 (354)
T ss_dssp EEEEECSEEC
T ss_pred EEEeeccccc
Confidence 9994 754
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Probab=93.68 E-value=0.032 Score=54.26 Aligned_cols=69 Identities=19% Similarity=0.148 Sum_probs=43.9
Q ss_pred HHHHHHHHHHcCCcEEEe-ccccccccc-CccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATN-DSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~-~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
++..++.|+++|||+|-| |+...-... -.|. + ...+..+|.+.. .+.|+++|++|.++|
T Consensus 43 ~~klidyl~~LGv~~iwl~Pi~~~~~~~~hGY~---~-------------~d~~~vdp~~Gt---~~d~~~LV~~aH~~g 103 (396)
T d1m7xa3 43 ADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQ---P-------------TGLYAPTRRFGT---RDDFRYFIDAAHAAG 103 (396)
T ss_dssp HHHHHHHHHHTTCSEEEESCCEECSCGGGTTSS---C-------------SEEEEECGGGSC---HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCcC---c-------------CcCCCcCcccCC---HHHHHHHHHHHhhhh
Confidence 344568999999999999 442110000 0011 0 011334665542 467999999999999
Q ss_pred CEEEEec---CCC
Q 008330 156 VMVILDN---HIS 165 (570)
Q Consensus 156 l~VILD~---H~~ 165 (570)
|+||||+ |..
T Consensus 104 i~VilD~V~NH~~ 116 (396)
T d1m7xa3 104 LNVILDWVPGHFP 116 (396)
T ss_dssp CEEEEEECTTSCC
T ss_pred hhhhhcccccccC
Confidence 9999995 654
|
| >d1upsa2 b.42.2.3 (A:290-420) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain {Clostridium perfringens [TaxId: 1502]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain domain: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain species: Clostridium perfringens [TaxId: 1502]
Probab=93.49 E-value=0.09 Score=44.42 Aligned_cols=80 Identities=14% Similarity=0.051 Sum_probs=48.4
Q ss_pred eeecccceEEeeccCCcccee-ccccC-CCCCceeEeecc-ccEEEEecCCCceEEEeecC-CCceeecceeeeCCCCCC
Q 008330 451 ISLKGAYFCLQAKHVGKPAKL-GIICT-DCGSTWEIISDS-KMHLSSKADNGTTVCLDVDS-SNTIVTNTCKCLSRDKTC 526 (570)
Q Consensus 451 ~~~~~~~~cl~a~~~g~~~~~-~~~c~-~~~~~W~~~s~~-~~~~~~~~~~~~~~cld~~~-~~~~~~~~c~c~~~~~~~ 526 (570)
|+-+.+++||.+.+.+..+.+ ...|. +.+|+|++.... ..+|. ...++.|||+.+ +|.+ .|.-. ..
T Consensus 5 I~N~~sGk~L~v~~~~~~~~~~~~~~~~~~~qqW~~~~~~g~y~i~---n~~sg~~l~~~~~sg~~-----~~~~~--~~ 74 (131)
T d1upsa2 5 IRNRQTGKFLYIEENNDKVSYGDITLKNEKNAKWSKEYRDGYTLLK---NNETGEYLNIENQTGYI-----EHGKV--PK 74 (131)
T ss_dssp EEETTTCCEEECCTTCSSCEEECCCTTTTGGGCEEEEEETTEEEEE---ETTTCCEEECTTCCSBC-----EEECC--CT
T ss_pred EEEccCCcEEEEeCCCCcEEEeccccCCCcccEEEEEeCCCEEEEE---ECCCCcEEEccCCCCce-----EEEcc--CC
Confidence 455789999997765444555 57887 667899997543 22443 346789999975 3321 12111 12
Q ss_pred CccCceEEEEeccC
Q 008330 527 DPASQWFKLVDSTR 540 (570)
Q Consensus 527 ~~~~~~~~~~~~~~ 540 (570)
+-.+|-|+|++..-
T Consensus 75 ~~~~qqW~l~~~gg 88 (131)
T d1upsa2 75 TWWSAQWSEVPVDG 88 (131)
T ss_dssp TCGGGCEEEEEETT
T ss_pred CChhHeEEEEecCC
Confidence 33445567776543
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Probab=92.99 E-value=0.048 Score=54.77 Aligned_cols=60 Identities=13% Similarity=0.136 Sum_probs=47.3
Q ss_pred ChHHHHHHHHHHcCCcEEEecccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 76 QPMDMLSKRVVDMGFNCVRLTWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRlPi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
..+++.++.||++|+|.|++.+-|..++++ .|..+| |..|+++++.+.++|
T Consensus 29 ~~~~~~L~~LK~aGV~gV~vdVwWGivE~~--------------------------~Pg~Yd---ws~yd~l~~mv~~~G 79 (417)
T d1vema2 29 ETFENDLRWAKQNGFYAITVDFWWGDMEKN--------------------------GDQQFD---FSYAQRFAQSVKNAG 79 (417)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEEHHHHTCS--------------------------STTCCC---CHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEEeeeeeeeecC--------------------------CCCccC---cHHHHHHHHHHHHcC
Confidence 347889999999999999999988666542 122232 567999999999999
Q ss_pred CE--EEEecCC
Q 008330 156 VM--VILDNHI 164 (570)
Q Consensus 156 l~--VILD~H~ 164 (570)
|+ |||..|.
T Consensus 80 LKi~vvmsfH~ 90 (417)
T d1vema2 80 MKMIPIISTHQ 90 (417)
T ss_dssp CEEEEEEECSC
T ss_pred CeEEEEEEecc
Confidence 87 5888986
|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isomaltulose synthase PalI species: Klebsiella sp., lx3 [TaxId: 576]
Probab=92.91 E-value=0.039 Score=55.91 Aligned_cols=66 Identities=11% Similarity=0.151 Sum_probs=42.4
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|-| |+...--....|.. .-.+..+|.+. ..+.|+++|++|.++||
T Consensus 33 i~~kLdyLk~LGv~~I~L~Pi~~~~~~~~GY~~----------------~d~~~vd~~~G---t~~df~~Lv~~aH~~Gi 93 (478)
T d1m53a2 33 IIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDI----------------SNYRQIMKEYG---TMEDFDSLVAEMKKRNM 93 (478)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEECCCTTTTSSC----------------SEEEEECGGGC---CHHHHHHHHHHHHHTTC
T ss_pred HHHhhHHHHHcCCCEEEECCCCCCCCCCCCcCc----------------cCCCCcCcccC---CHHHHHHHHHHHHHCCC
Confidence 455678899999999999 44321000001110 00123355553 25679999999999999
Q ss_pred EEEEec
Q 008330 157 MVILDN 162 (570)
Q Consensus 157 ~VILD~ 162 (570)
+||||+
T Consensus 94 ~VilD~ 99 (478)
T d1m53a2 94 RLMIDV 99 (478)
T ss_dssp EEEEEE
T ss_pred EEEecc
Confidence 999995
|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclomaltodextrinase, central domain species: Flavobacterium sp. 92 [TaxId: 197856]
Probab=92.62 E-value=0.058 Score=53.71 Aligned_cols=66 Identities=12% Similarity=0.013 Sum_probs=42.6
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccC---ccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhc
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATND---SLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGN 153 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~---~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~ 153 (570)
+.+-++.|+++|+|+|-| |+...-.... .|. + ...+..+|.+-. .+.|+++|++|.+
T Consensus 55 l~~kLdyl~~LGv~~I~l~Pi~~~~~~~~~~~GY~---~-------------~d~~~vd~~~Gt---~~df~~lv~~~H~ 115 (422)
T d1h3ga3 55 TIDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYA---A-------------TDHYRIDPRYGS---NEDFVRLSTEARK 115 (422)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEECCCSSCGGGCCS---C-------------SEEEEECTTTCC---HHHHHHHHHHHHH
T ss_pred HHHhHHHHHHCCCCEEEeCCcccCCCCCCCCCCCC---c-------------cccCCcccccCC---HHHHHHHHHHHHH
Confidence 344578899999999998 5521100000 010 0 001244666643 5679999999999
Q ss_pred CCCEEEEec
Q 008330 154 NNVMVILDN 162 (570)
Q Consensus 154 ~Gl~VILD~ 162 (570)
+||+||||+
T Consensus 116 ~Gi~VilD~ 124 (422)
T d1h3ga3 116 RGMGLIQDV 124 (422)
T ss_dssp TTCEEEEEE
T ss_pred hCccccccC
Confidence 999999995
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=92.32 E-value=0.12 Score=50.53 Aligned_cols=65 Identities=17% Similarity=0.191 Sum_probs=42.7
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|||+|-| |+.. ......|.. ...+..+|.+-+ .+-|+++|++|.++||
T Consensus 53 i~~kLdylk~LGv~~i~l~Pi~~-~~~~~gY~~----------------~~~~~id~~~Gt---~~df~~lv~~~h~~gi 112 (382)
T d1ea9c3 53 VIDHLDHLSKLGVNAVYFTPLFK-ATTNHKYDT----------------EDYFQIDPQFGD---KDTLKKLVDLCHERGI 112 (382)
T ss_dssp HHHTHHHHHHHTCSEEEECCCSS-CSSSSTTSC----------------SCTTCCCTTTCC---HHHHHHHHHHHTTTTC
T ss_pred HHHhhHHHHhCCCCEEEeCCCcc-CCCCCCCCc----------------ccccccccccCC---HHHHHHHHHHHHhhcc
Confidence 455578999999999998 4421 111111110 011344555543 4679999999999999
Q ss_pred EEEEec
Q 008330 157 MVILDN 162 (570)
Q Consensus 157 ~VILD~ 162 (570)
+||||+
T Consensus 113 ~VilD~ 118 (382)
T d1ea9c3 113 RVLLDA 118 (382)
T ss_dssp EEEEEC
T ss_pred eEEEee
Confidence 999996
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Probab=92.01 E-value=0.12 Score=50.75 Aligned_cols=69 Identities=14% Similarity=0.163 Sum_probs=45.7
Q ss_pred HHHHHHHHHHcCCcEEEe-ccccccccc-CccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATN-DSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNN 155 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~-~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~G 155 (570)
+.+-++.|+++|+|+|=| |+....-.. ..|.. ...+..+|.+-. .+.|+++|++|.++|
T Consensus 31 i~~~ldyi~~LGv~~i~l~Pv~~~~~~~~~GY~~----------------~d~~~vd~~~Gt---~~dlk~lv~~~h~~g 91 (400)
T d1eh9a3 31 VIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDG----------------VYLYAVQNSYGG---PEGFRKLVDEAHKKG 91 (400)
T ss_dssp HHHTHHHHHHHTCCEEEECCCBCCSSSCCCSTTC----------------CCTTCBCSTTCC---HHHHHHHHHHHHHTT
T ss_pred HHHHhHHHHHcCCCEEEeCCcCcCCCCCCCCCCC----------------CCCCCcCcccCC---HHHHHHHHHHHHhcC
Confidence 455678899999999999 553211110 01110 112345666643 577999999999999
Q ss_pred CEEEEec---CCC
Q 008330 156 VMVILDN---HIS 165 (570)
Q Consensus 156 l~VILD~---H~~ 165 (570)
|+||||+ |..
T Consensus 92 i~VilD~V~NH~s 104 (400)
T d1eh9a3 92 LGVILDVVYNHVG 104 (400)
T ss_dssp CEEEEEECCSCCC
T ss_pred Cceeeeccccccc
Confidence 9999995 654
|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Oligo-1,6, glucosidase species: Bacillus cereus [TaxId: 1396]
Probab=91.95 E-value=0.06 Score=54.50 Aligned_cols=66 Identities=6% Similarity=0.088 Sum_probs=41.3
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|-| |+....-....|.. ...+..+|.+. ..+.|+++|++|.++||
T Consensus 33 i~~kLdYLk~LGv~~I~l~Pi~~~~~~~~GY~~----------------~d~~~vd~~~G---t~~df~~Lv~~aH~~Gi 93 (479)
T d1uoka2 33 IISKLDYLKELGIDVIWLSPVYESPNDDNGYDI----------------SDYCKIMNEFG---TMEDWDELLHEMHERNM 93 (479)
T ss_dssp HHTTHHHHHHHTCCEEEECCCEECCCTTTTSSC----------------SEEEEECGGGC---CHHHHHHHHHHHHHTTC
T ss_pred HHHhhHHHHHcCCCEEEECCCcCCCCCCCCcCc----------------cccCCcCcccC---CHHHHHHHHHHHHHCCC
Confidence 334467899999999999 44211000001110 00123355543 35679999999999999
Q ss_pred EEEEec
Q 008330 157 MVILDN 162 (570)
Q Consensus 157 ~VILD~ 162 (570)
+||||+
T Consensus 94 ~VilD~ 99 (479)
T d1uoka2 94 KLMMDL 99 (479)
T ss_dssp EEEEEE
T ss_pred EEEecc
Confidence 999994
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=90.93 E-value=0.094 Score=52.03 Aligned_cols=74 Identities=15% Similarity=0.116 Sum_probs=42.9
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|=| |+....-......+ .+ ..|.. ....+..+|.+- -.+.|+++|++|.++||
T Consensus 54 i~~kLdyl~~LGv~~I~L~Pi~~~~~~~~~~~~----~~--~~gY~--~~d~~~id~~~G---t~~d~k~Lv~~~H~~Gi 122 (407)
T d1qhoa4 54 VRQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDN----TG--YHGYW--TRDFKQIEEHFG---NWTTFDTLVNDAHQNGI 122 (407)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEEECSSCSSTTC----CC--TTSCS--EEEEEEECTTTC---CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEeCccccCCcccCCCCC----CC--CCcee--eeecCCCCCCCC---CHHHHHHHHHHhhhccc
Confidence 445578899999999999 55321100000000 00 00000 001123466654 35779999999999999
Q ss_pred EEEEec
Q 008330 157 MVILDN 162 (570)
Q Consensus 157 ~VILD~ 162 (570)
+||||+
T Consensus 123 ~VilD~ 128 (407)
T d1qhoa4 123 KVIVDF 128 (407)
T ss_dssp EEEEEE
T ss_pred ceeecc
Confidence 999995
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=90.68 E-value=0.079 Score=52.53 Aligned_cols=30 Identities=27% Similarity=0.444 Sum_probs=24.7
Q ss_pred cCCCCCCCchHHHHHHHHHHHHhcCCCEEEEec
Q 008330 130 SNNPSIVDLPLIKAFQAVVASLGNNNVMVILDN 162 (570)
Q Consensus 130 ~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~ 162 (570)
..+|.+-. .+.|+++|++|.++||+||||+
T Consensus 108 ~vdp~~Gt---~~dfk~LV~~aH~~Gi~VilD~ 137 (406)
T d3bmva4 108 RTNPYFGS---FTDFQNLINTAHAHNIKVIIDF 137 (406)
T ss_dssp EECTTTCC---HHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCccccc---HHHHHHHHHHHHhccccceeee
Confidence 44666643 5679999999999999999996
|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isoamylase, central domain species: Pseudomonas amyloderamosa [TaxId: 32043]
Probab=90.62 E-value=0.21 Score=50.14 Aligned_cols=24 Identities=29% Similarity=0.380 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEec
Q 008330 139 PLIKAFQAVVASLGNNNVMVILDN 162 (570)
Q Consensus 139 t~l~~ld~vV~~a~~~Gl~VILD~ 162 (570)
--.+-|+++|++|.++||+||+|+
T Consensus 108 Gt~~d~~~LV~~aH~~GIrVilD~ 131 (475)
T d1bf2a3 108 GPTAEFQAMVQAFHNAGIKVYMDV 131 (475)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHhcCcEEEEEe
Confidence 346789999999999999999995
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=90.60 E-value=0.15 Score=50.32 Aligned_cols=75 Identities=16% Similarity=0.221 Sum_probs=44.4
Q ss_pred ChHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 76 QPMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
+.+.+-++.|+++|||+|=| |+....-....+.. +. .|.. ..-.+..+|.+.. .+.|+++|++|.++
T Consensus 43 ~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~-----~~--~gY~--~~d~~~vd~~~Gt---~~dfk~lv~~~H~~ 110 (381)
T d2guya2 43 QGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGD-----AY--HGYW--QQDIYSLNENYGT---ADDLKALSSALHER 110 (381)
T ss_dssp HHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBC-----CT--TSCS--EEEEEEECTTSCC---HHHHHHHHHHHHHT
T ss_pred HHHHHhHHHHHHCCCCEEEeCCCCCCCcccCCCCC-----CC--CCcc--cccccccccCCCC---HHHHHHHHHHHHhh
Confidence 33555678999999999998 54321100000000 00 0000 0011345666643 47799999999999
Q ss_pred CCEEEEec
Q 008330 155 NVMVILDN 162 (570)
Q Consensus 155 Gl~VILD~ 162 (570)
||+||||+
T Consensus 111 Gi~VilD~ 118 (381)
T d2guya2 111 GMYLMVDV 118 (381)
T ss_dssp TCEEEEEE
T ss_pred ccceeeec
Confidence 99999994
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Probab=90.54 E-value=0.12 Score=51.08 Aligned_cols=78 Identities=14% Similarity=0.218 Sum_probs=46.3
Q ss_pred ChHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 76 QPMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
+.+.+-++.|+++|||+|-| |+... ...+..+. .+. .|. .....+..+|.+.. .+.|+++|++|.++
T Consensus 43 ~g~~~kLdyL~~LGv~~I~L~Pi~~~-~~~~~~~~----~~~--~gY--~~~d~~~id~~~Gt---~~~~k~lv~~aH~~ 110 (381)
T d2aaaa2 43 QGIIDHLDYIEGMGFTAIWISPITEQ-LPQDTADG----EAY--HGY--WQQKIYDVNSNFGT---ADNLKSLSDALHAR 110 (381)
T ss_dssp HHHHHTHHHHHTTTCCEEEECCCEEE-CCCCBTTB----CST--TSC--SEEEEEEECTTTCC---HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCccC-CccCCCCC----CCC--ccc--ccccccccccccCC---HHHHHHHHHHHhhh
Confidence 34556688999999999998 55321 11100000 000 000 00011344666543 46799999999999
Q ss_pred CCEEEEec---CCC
Q 008330 155 NVMVILDN---HIS 165 (570)
Q Consensus 155 Gl~VILD~---H~~ 165 (570)
||.||||+ |..
T Consensus 111 Gi~VilD~V~NH~~ 124 (381)
T d2aaaa2 111 GMYLMVDVVPDHMG 124 (381)
T ss_dssp TCEEEEEECCSBCC
T ss_pred hhcccccccccccc
Confidence 99999995 654
|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus subtilis [TaxId: 1423]
Probab=90.18 E-value=0.1 Score=50.93 Aligned_cols=73 Identities=14% Similarity=0.119 Sum_probs=43.6
Q ss_pred ChHHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccC-----cccCCCCCCCchHHHHHHHHHH
Q 008330 76 QPMDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGG-----IQSNNPSIVDLPLIKAFQAVVA 149 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g-----~~~~nP~~~~~t~l~~ld~vV~ 149 (570)
+.+.+-++.|+++|||+|=| |+... -......... . ..+.| .+..+|.+- -.+.|+++|+
T Consensus 17 ~~i~~~ldyl~~lGv~aIwl~Pi~~~-~~~~~~~~~~-~---------~~y~gY~~~dy~~vd~~~G---t~~df~~LV~ 82 (344)
T d1ua7a2 17 NTLKHNMKDIHDAGYTAIQTSPINQV-KEGNQGDKSM-S---------NWYWLYQPTSYQIGNRYLG---TEQEFKEMCA 82 (344)
T ss_dssp HHHHHTHHHHHHTTCSEEEECCCEEE-CCTGGGCCBG-G---------GGGGGGCEEEEEEEETTTE---EHHHHHHHHH
T ss_pred HHHHHhHHHHHHcCCCEEEeCCCeeC-CCcCCCCCCC-C---------CCccccccccCCCCCCCCC---CHHHHHHHHH
Confidence 34556678899999999998 55321 1110000000 0 00111 123355543 3467999999
Q ss_pred HHhcCCCEEEEec
Q 008330 150 SLGNNNVMVILDN 162 (570)
Q Consensus 150 ~a~~~Gl~VILD~ 162 (570)
+|.++||+||||+
T Consensus 83 ~aH~~Gi~VilD~ 95 (344)
T d1ua7a2 83 AAEEYGIKVIVDA 95 (344)
T ss_dssp HHHTTTCEEEEEE
T ss_pred HhcccceeEeecc
Confidence 9999999999996
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=89.31 E-value=0.21 Score=48.67 Aligned_cols=65 Identities=15% Similarity=0.207 Sum_probs=43.1
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|=| |+.... ....|.. ...+..+|.+.. .+.++++|+.|.++||
T Consensus 55 i~~kldyl~~LGv~~i~L~Pi~~~~-~~~gy~~----------------~d~~~vd~~~Gt---~~~~~~lv~~aH~~Gi 114 (382)
T d1j0ha3 55 IIDHLDYLVDLGITGIYLTPIFRSP-SNHKYDT----------------ADYFEVDPHFGD---KETLKTLIDRCHEKGI 114 (382)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEECS-SSSCCSC----------------SEEEEECTTTCC---HHHHHHHHHHHHHTTC
T ss_pred HHHhHHHHHHcCCCEEEeCCCCcCC-cccCCCc----------------ccccccCCCCCC---HHHHHHHHHHhhhccc
Confidence 444568999999999998 663211 0001110 011344666543 5679999999999999
Q ss_pred EEEEec
Q 008330 157 MVILDN 162 (570)
Q Consensus 157 ~VILD~ 162 (570)
+||||+
T Consensus 115 ~VilD~ 120 (382)
T d1j0ha3 115 RVMLDA 120 (382)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 999995
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=89.00 E-value=0.19 Score=49.10 Aligned_cols=65 Identities=12% Similarity=0.153 Sum_probs=42.0
Q ss_pred HHHHHHHHHHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNV 156 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl 156 (570)
+.+-++.|+++|+|+|-| |+-. ......|.. ...+..+|.+.. .+-|+++|++|.++||
T Consensus 25 i~~kLdyl~~LGv~~I~l~Pi~~-~~~~~GY~~----------------~d~~~vd~~~Gt---~~d~~~lv~~~h~~gi 84 (391)
T d1lwha2 25 LKNAVSYLKELGIDFVWLMPVFS-SISFHGYDV----------------VDFYSFKAEYGS---EREFKEMIEAFHDSGI 84 (391)
T ss_dssp HHHTHHHHHHTTCSEEEECCCEE-CSSSSCCSC----------------SEEEEECGGGCC---HHHHHHHHHHHHHTTC
T ss_pred HHHhhHHHHHcCCCEEEECCCCC-CCCCCCCCc----------------cCCCCcCcccCC---HHHHHHHHHHHHhcCC
Confidence 445578899999999999 5521 111111110 001233555432 4679999999999999
Q ss_pred EEEEec
Q 008330 157 MVILDN 162 (570)
Q Consensus 157 ~VILD~ 162 (570)
+||+|+
T Consensus 85 ~VilD~ 90 (391)
T d1lwha2 85 KVVLDL 90 (391)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 999995
|
| >d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Pullulanase PulA species: Klebsiella pneumoniae [TaxId: 573]
Probab=88.56 E-value=0.31 Score=49.72 Aligned_cols=24 Identities=25% Similarity=0.466 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHH-hcCCCEEEEec
Q 008330 139 PLIKAFQAVVASL-GNNNVMVILDN 162 (570)
Q Consensus 139 t~l~~ld~vV~~a-~~~Gl~VILD~ 162 (570)
..++.++++|++| .++||+||||+
T Consensus 177 ~~l~Efk~lV~a~~H~rGIkVIlD~ 201 (563)
T d2fhfa5 177 ARIKEFRTMIQAIKQDLGMNVIMDV 201 (563)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHhhccCceeeecC
Confidence 4688899999987 78899999994
|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltosyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=87.72 E-value=0.21 Score=51.44 Aligned_cols=26 Identities=27% Similarity=0.268 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHhcCCCEEEEec---CCC
Q 008330 140 LIKAFQAVVASLGNNNVMVILDN---HIS 165 (570)
Q Consensus 140 ~l~~ld~vV~~a~~~Gl~VILD~---H~~ 165 (570)
-++.|+++|++|.++||+||||+ |..
T Consensus 180 t~~dfk~lV~~~H~~GI~VIlDvV~NHts 208 (572)
T d1gjwa2 180 VDEEFKAFVEACHILGIRVILDFIPRTAA 208 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTEEE
T ss_pred CHHHHHHHHHHHHhcCcEEEEEeeecccc
Confidence 46789999999999999999996 764
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=85.87 E-value=0.31 Score=47.48 Aligned_cols=57 Identities=19% Similarity=0.259 Sum_probs=36.7
Q ss_pred HHcCCcEEEe-cccccccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcCCCEEEEec
Q 008330 86 VDMGFNCVRL-TWPLYLATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNNNVMVILDN 162 (570)
Q Consensus 86 ~~~GfN~VRl-Pi~~~~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~Gl~VILD~ 162 (570)
|++|||+|-| |+... -....|.. ...+..+|.+.. .+.|+++|++|.++||+||||+
T Consensus 45 ~~LGv~~i~l~Pi~~~-~~~~GY~~----------------~d~~~vd~~~G~---~~dlk~lv~~~H~~Gi~VilD~ 102 (409)
T d1wzaa2 45 ADLGVNGIWLMPIFKS-PSYHGYDV----------------TDYYKINPDYGT---LEDFHKLVEAAHQRGIKVIIDL 102 (409)
T ss_dssp SSCCCSEEEECCCEEC-SSSSCCSC----------------SEEEEECGGGCC---HHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhcCccEEEECCCCCC-CCCCCcCc----------------ccCCCcCcccCC---HHHHHHHHHHHHhcCCEEEEec
Confidence 7999999999 55321 00111110 001234555433 4679999999999999999995
|
| >d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Amylosucrase species: Neisseria polysaccharea [TaxId: 489]
Probab=85.80 E-value=0.54 Score=48.89 Aligned_cols=66 Identities=17% Similarity=0.273 Sum_probs=43.2
Q ss_pred HHHHHHHHHHcCCcEEEe-ccccccc--ccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 78 MDMLSKRVVDMGFNCVRL-TWPLYLA--TNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 78 ~~~~~~~i~~~GfN~VRl-Pi~~~~~--~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
+.+-++.|+++|+|+|=| |+....- ....|+ + .-.+..+|.+-. ++-|+++|++|.++
T Consensus 115 i~~kLdYLk~LGVt~I~L~Pi~~~p~~~sd~GY~---v-------------~dy~~Vdp~lGt---~edl~~Lv~~aH~r 175 (554)
T d1g5aa2 115 LKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYA---V-------------SSYRDVNPALGT---IGDLREVIAALHEA 175 (554)
T ss_dssp HHTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTS---C-------------SCSSSBCTTTCC---HHHHHHHHHHHHHT
T ss_pred HHHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcC---c-------------ccCCCCCcccCC---HHHHHHHHHHHHHC
Confidence 445578999999999999 5522100 000111 0 011345666643 57799999999999
Q ss_pred CCEEEEec
Q 008330 155 NVMVILDN 162 (570)
Q Consensus 155 Gl~VILD~ 162 (570)
||+||||+
T Consensus 176 GI~VilD~ 183 (554)
T d1g5aa2 176 GISAVVDF 183 (554)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEE
Confidence 99999995
|
| >d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltooligosyl trehalose synthase species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=84.43 E-value=0.37 Score=51.25 Aligned_cols=71 Identities=15% Similarity=0.113 Sum_probs=47.5
Q ss_pred ChHHHHHHHHHHcCCcEEEe-ccccccc-ccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhc
Q 008330 76 QPMDMLSKRVVDMGFNCVRL-TWPLYLA-TNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGN 153 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRl-Pi~~~~~-~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~ 153 (570)
..+.+.++.|+++|+++|=| |+....- ....|. +. -.+..||.+. ..+-|+++|++|.+
T Consensus 17 ~~~~~~LpYL~~LGVs~IyLsPi~~a~~gS~HGYD---v~-------------D~~~Vdp~lG---t~edf~~LV~aaH~ 77 (653)
T d1iv8a2 17 GDVIDNLWYFKDLGVSHLYLSPVLMASPGSNHGYD---VI-------------DHSRINDELG---GEKEYRRLIETAHT 77 (653)
T ss_dssp HHHHHTHHHHHHHTCCEEEECCCEEECTTCSSCCS---EE-------------EEEEECTTTT---HHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHCCCCEEEECccCCCCCCCCCCcc---cc-------------CccccchhcC---CHHHHHHHHHHHHH
Confidence 45677899999999999998 4321100 000111 00 0134577764 46779999999999
Q ss_pred CCCEEEEe---cCCC
Q 008330 154 NNVMVILD---NHIS 165 (570)
Q Consensus 154 ~Gl~VILD---~H~~ 165 (570)
+||+||+| ||..
T Consensus 78 ~Gm~VIlDiVpNH~g 92 (653)
T d1iv8a2 78 IGLGIIQDIVPNHMA 92 (653)
T ss_dssp TTCEEEEEECCSEEE
T ss_pred CCCEEEEEECCCccc
Confidence 99999999 6753
|
| >d1hcda_ b.42.5.2 (A:) Histidine-rich actin-binding protein (hisactophilin) {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Histidine-rich actin-binding protein (hisactophilin) domain: Histidine-rich actin-binding protein (hisactophilin) species: Dictyostelium discoideum [TaxId: 44689]
Probab=81.61 E-value=2.5 Score=34.35 Aligned_cols=66 Identities=12% Similarity=0.019 Sum_probs=44.3
Q ss_pred CCCCcccc-CCcceeecc-cceEEeeccCCccceeccccC-CCCCceeEeeccccEEEEecCCCceEEEeec
Q 008330 439 ESEAWSYT-PHKTISLKG-AYFCLQAKHVGKPAKLGIICT-DCGSTWEIISDSKMHLSSKADNGTTVCLDVD 507 (570)
Q Consensus 439 ~~~~W~~~-~~~~~~~~~-~~~cl~a~~~g~~~~~~~~c~-~~~~~W~~~s~~~~~~~~~~~~~~~~cld~~ 507 (570)
..+.|+.+ ..+.|.|+. .+++|.+.+.|. +.. +... ++..+|++. .+.-+++++..||.+||.+-+
T Consensus 30 ~~~~F~ve~~~g~iaLks~~GkYlsa~~~g~-l~~-~~~~~~~~E~F~ie-~~~g~valrs~nGkylsa~~~ 98 (118)
T d1hcda_ 30 HHTHFHVENHGGKVALKTHCGKYLSIGDHKQ-VYL-SHHLHGDHSLFHLE-HHGGKVSIKGHHHHYISADHH 98 (118)
T ss_dssp CCCCCEEEEETTEEEEESSSSCEEEEEETTE-EEE-ECCCSSSSSSBEEE-EETTEEEEECSTTCEEEECGG
T ss_pred CCceEEEEcCCCEEEEEeCCCCEEEecCCCc-EEE-eccCCCCceEEEEE-ECCCEEEEEeCCCCEEEEcCC
Confidence 35678776 334677655 678899988875 333 3333 555666654 445678889999999998753
|
| >d2q02a1 c.1.15.4 (A:1-271) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: IolI-like domain: Putative cytoplasmic protein STM4435 species: Salmonella typhimurium [TaxId: 90371]
Probab=81.12 E-value=16 Score=32.81 Aligned_cols=150 Identities=15% Similarity=0.145 Sum_probs=88.1
Q ss_pred ChHHHHHHHHHHcCCcEEEeccc--ccccccCccccchhhhhhhhccchhhcc-CcccCCCCCCCchHHHHHHHHHHHHh
Q 008330 76 QPMDMLSKRVVDMGFNCVRLTWP--LYLATNDSLASLTVRQSFQKLGLLEAIG-GIQSNNPSIVDLPLIKAFQAVVASLG 152 (570)
Q Consensus 76 ~~~~~~~~~i~~~GfN~VRlPi~--~~~~~~~~~~n~tv~~s~~~lg~~~~~~-g~~~~nP~~~~~t~l~~ld~vV~~a~ 152 (570)
-|+++.++.+++.||+.|=|-.. ...+... .....++.-++..|+.-... ..+..+ ..+....+.++++++.|.
T Consensus 18 l~lee~l~~a~~~G~dgiEl~~~~~~~~~~~~-~~~~~~k~~l~~~gl~i~~l~~~~~~~--~~~~~~~~~~~~~i~~a~ 94 (271)
T d2q02a1 18 LSIEAFFRLVKRLEFNKVELRNDMPSGSVTDD-LNYNQVRNLAEKYGLEIVTINAVYPFN--QLTEEVVKKTEGLLRDAQ 94 (271)
T ss_dssp SCHHHHHHHHHHTTCCEEEEETTSTTSSTTTT-CCHHHHHHHHHHTTCEEEEEEEETTTT--SCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCEEEEecCccccccccc-CCHHHHHHHHHHcCCcEEEeecccccC--CCCHHHHHHHHHHHHHHH
Confidence 47899999999999999988211 0111110 01112334455556542111 111111 123457888999999999
Q ss_pred cCCCEEEEecCCCCCCccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCCCCChhHHHHHHHH
Q 008330 153 NNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFNPDLWIKGLTKMATIFNGVRNVVGMSLRNELRGPKQNVKDWYRYMQL 232 (570)
Q Consensus 153 ~~Gl~VILD~H~~~~~w~~~~~dgng~~~d~~~~~~~~~~~w~~iA~ryk~~p~Vig~dL~NEP~~~~~~~~~W~~~~~~ 232 (570)
+.|...|+=. |+ .+. .....+.+++.++.+++.-+.+.-.+++|.+|-+...- .++ .+
T Consensus 95 ~lG~~~v~~~----~~-----~~~------~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~---~~~----~~ 152 (271)
T d2q02a1 95 GVGARALVLC----PL-----NDG------TIVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSL---RSA----VW 152 (271)
T ss_dssp HHTCSEEEEC----CC-----CSS------BCCCHHHHHHHHHHHHHHHHTTTCEEEECCCCSTTCSC---CCH----HH
T ss_pred HcCCcEEEEe----cC-----CCC------ccchHHHHHHHHHHHHHHhccCCeEEEEeecCCcCccc---CCH----HH
Confidence 9999877632 11 011 11346778899999998888887788899877443321 222 23
Q ss_pred HHHHHHhcCCCcEEEEeC
Q 008330 233 GAEAVHAANPEVLVILSG 250 (570)
Q Consensus 233 ~~~aIr~~dp~~lIiVeG 250 (570)
+.+.|+.+++..-+.++.
T Consensus 153 ~~~li~~~~~~~g~~~D~ 170 (271)
T d2q02a1 153 AQQLIREAGSPFKVLLDT 170 (271)
T ss_dssp HHHHHHHHTCCCEEEEEH
T ss_pred HHHHHHHhCCccceeccc
Confidence 446666777665555553
|
| >d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Sucrose phosphorylase species: Bifidobacterium adolescentis [TaxId: 1680]
Probab=80.09 E-value=0.76 Score=43.84 Aligned_cols=62 Identities=6% Similarity=0.066 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHcCCcEEEe-ccccc-ccccCccccchhhhhhhhccchhhccCcccCCCCCCCchHHHHHHHHHHHHhcC
Q 008330 77 PMDMLSKRVVDMGFNCVRL-TWPLY-LATNDSLASLTVRQSFQKLGLLEAIGGIQSNNPSIVDLPLIKAFQAVVASLGNN 154 (570)
Q Consensus 77 ~~~~~~~~i~~~GfN~VRl-Pi~~~-~~~~~~~~n~tv~~s~~~lg~~~~~~g~~~~nP~~~~~t~l~~ld~vV~~a~~~ 154 (570)
.+.+-++.|+++|+|+|=| |+... ...+..|.. .-.+..+|.+-...-|+.| ++
T Consensus 21 g~~~~Ldyl~~LGv~~I~L~Pi~~~~~~~d~GY~~----------------~Dy~~vdp~~Gt~~d~k~L--------~r 76 (434)
T d1r7aa2 21 SMTDILRTRFDGVYDGVHILPFFTPFDGADAGFDP----------------IDHTKVDERLGSWDDVAEL--------SK 76 (434)
T ss_dssp HHHHHHHHHSTTTCCEEEECCCEECSSSSSTTSSC----------------SEEEEECTTTCCHHHHHHH--------HT
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCCCCCcCc----------------ccccccCcccCCHHHHHHH--------Hh
Confidence 3556678899999999999 55321 000111210 0113557777654444443 47
Q ss_pred CCEEEEec
Q 008330 155 NVMVILDN 162 (570)
Q Consensus 155 Gl~VILD~ 162 (570)
||+||||+
T Consensus 77 Gi~VIlDv 84 (434)
T d1r7aa2 77 THNIMVDA 84 (434)
T ss_dssp TSEEEEEE
T ss_pred CCeeeEEe
Confidence 99999994
|
| >d1dfca1 b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.06 E-value=0.59 Score=39.21 Aligned_cols=56 Identities=11% Similarity=0.169 Sum_probs=36.9
Q ss_pred ccceEEeeccCCccceeccccC-CCCCceeEee---c-cccEEEEecCCCceEEEeecCCCcee
Q 008330 455 GAYFCLQAKHVGKPAKLGIICT-DCGSTWEIIS---D-SKMHLSSKADNGTTVCLDVDSSNTIV 513 (570)
Q Consensus 455 ~~~~cl~a~~~g~~~~~~~~c~-~~~~~W~~~s---~-~~~~~~~~~~~~~~~cld~~~~~~~~ 513 (570)
.++++|.|+..|..+.. +.-+ +..++|++.- + +.-.+.++..+|.|||.|- +|.++
T Consensus 12 ~~gkYltAe~~G~~v~a-~~~~~~~~e~w~le~~~~~~~~~~v~Lrs~~Gkylsa~~--~g~v~ 72 (133)
T d1dfca1 12 CGNKYLTAEAFGFKVNA-SASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADK--DGNVT 72 (133)
T ss_dssp TTSCBCEECSSSSCEEC-CCSSCCTTTCEECC--------CCBCCBCTTSCEEEECT--TSCEE
T ss_pred cCCcEEEEECCCCEEEe-eCCCCCCCcEEEEEEecCCCCCCEEEEEecCCCEEeecc--CcceE
Confidence 37899999999976544 4333 6778898851 1 2223566678899999975 44444
|