Citrus Sinensis ID: 008383
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 567 | 2.2.26 [Sep-21-2011] | |||||||
| Q84WU9 | 596 | Zinc finger CCCH domain-c | yes | no | 0.973 | 0.926 | 0.716 | 0.0 | |
| Q69NK8 | 613 | Zinc finger CCCH domain-c | yes | no | 0.973 | 0.900 | 0.592 | 0.0 | |
| Q5RGJ5 | 544 | CWF19-like protein 1 OS=D | yes | no | 0.844 | 0.880 | 0.306 | 2e-64 | |
| Q8AVL0 | 540 | CWF19-like protein 1 OS=X | N/A | no | 0.837 | 0.879 | 0.315 | 9e-62 | |
| O16216 | 533 | CWF19-like protein 1 homo | yes | no | 0.828 | 0.881 | 0.288 | 6e-53 | |
| Q8CI33 | 537 | CWF19-like protein 1 OS=M | yes | no | 0.830 | 0.877 | 0.290 | 1e-46 | |
| Q69YN2 | 538 | CWF19-like protein 1 OS=H | yes | no | 0.835 | 0.881 | 0.293 | 2e-42 | |
| Q5R8R4 | 538 | CWF19-like protein 1 OS=P | yes | no | 0.514 | 0.542 | 0.334 | 4e-37 | |
| A1Z8J0 | 545 | CWF19-like protein 1 homo | yes | no | 0.490 | 0.510 | 0.342 | 7e-36 | |
| Q10414 | 561 | CWF19-like protein mug161 | yes | no | 0.832 | 0.841 | 0.244 | 6e-33 |
| >sp|Q84WU9|C3H64_ARATH Zinc finger CCCH domain-containing protein 64 OS=Arabidopsis thaliana GN=At5g56900 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/561 (71%), Positives = 466/561 (83%), Gaps = 9/561 (1%)
Query: 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
PRILLCGD LGRLNQLFKRVQSV+KSAGPFDA++CVGQFFPDS E+LDEF++YVEGR+++
Sbjct: 3 PRILLCGDPLGRLNQLFKRVQSVSKSAGPFDALICVGQFFPDSPEILDEFLDYVEGRAQV 62
Query: 64 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL 123
PIPTYF GDYGV A K+L SK + NQGFKMDG +V NLFWL+GSG F+LHGLSVAYL
Sbjct: 63 PIPTYFTGDYGVVAPKILSTTSKKAENQGFKMDGLEVCHNLFWLRGSGKFSLHGLSVAYL 122
Query: 124 SGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDS 183
SGRQSSE Q FG YSQDDVDALRALAEEPG VDLFLTNEWP+GVTN+AA SD+ VGISDS
Sbjct: 123 SGRQSSESQ-FGKYSQDDVDALRALAEEPGGVDLFLTNEWPAGVTNRAAVSDIPVGISDS 181
Query: 184 SNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIH 243
S +DSTVSELV E+KPRYHIAGS GVFYAREPY N ++ HVTRF+GLA VGNK KQKF+H
Sbjct: 182 SCSDSTVSELVMEVKPRYHIAGSMGVFYAREPYLNAESTHVTRFIGLAQVGNKNKQKFLH 241
Query: 244 ALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQK 303
ALSPTP +TMS A++S K P TTL PY D + SK KRP+DS SDSQYWRYDV K
Sbjct: 242 ALSPTPTSTMSPAELSAKPPKTTLWPYNLQDGAAESK---KRPNDSDSDSQYWRYDVP-K 297
Query: 304 RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPEC 363
RQK G G+K+CFKF+ SGSCPRGE C+F+H+ +AREQC RGVCLD IIKGKCEKGPEC
Sbjct: 298 RQK-SGSQGEKLCFKFVCSGSCPRGEDCHFQHNAEAREQCRRGVCLDLIIKGKCEKGPEC 356
Query: 364 SYKHSLQNDDS-QRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLV 422
SYKH Q++ S QR RSENA NRSKECWFCLSSPSVESHLIVSVGE +YCALPKG LV
Sbjct: 357 SYKHEFQDESSIQRKPRSENA--NRSKECWFCLSSPSVESHLIVSVGESFYCALPKGSLV 414
Query: 423 EDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQ 482
EDH+L+IP+EH+PNT+ SPE E EL R+QN L YK+QG +AVFFE +SKR +HANLQ
Sbjct: 415 EDHILIIPIEHLPNTLVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELVSKRVSHANLQ 474
Query: 483 AVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEG 542
VP+P+S+A + +IF+LAAEKLGFK + K + S+DGR+ L+ +++ FYVELP+G
Sbjct: 475 VVPVPSSRARLLPNIFSLAAEKLGFKLVTKKFNDSTDGRKYLQKEYNAALGLFYVELPDG 534
Query: 543 TVLSHLIEENERFPAQFGREV 563
TVLSH +EENE FPAQFGREV
Sbjct: 535 TVLSHTLEENEVFPAQFGREV 555
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q69NK8|C3H59_ORYSJ Zinc finger CCCH domain-containing protein 59 OS=Oryza sativa subsp. japonica GN=Os09g0364000 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/565 (59%), Positives = 415/565 (73%), Gaps = 13/565 (2%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFF-PDSSELLD----EFMNYVEG 59
RILL GD GRL+QLFKRV SVN+S GPF A+LCVGQFF PD+ + E +Y+EG
Sbjct: 15 RILLAGDANGRLHQLFKRVTSVNQSTGPFHALLCVGQFFSPDAGDGDGGGGGEVADYLEG 74
Query: 60 RSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLS 119
R+ +PIPTYF GDYG A ++L A+ S+ +GF G ++ NLFWL+GS FTLHGLS
Sbjct: 75 RAAVPIPTYFTGDYGPAAPRLLAKAA--SSARGFSPGGIQICPNLFWLRGSARFTLHGLS 132
Query: 120 VAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVG 179
V YLSGR+ G G YSQDDVDALRALAEEPGIVDLFLTNEWP+GV N S+
Sbjct: 133 VVYLSGRKGPGGP--GCYSQDDVDALRALAEEPGIVDLFLTNEWPAGVVNGVDTSNAPSQ 190
Query: 180 ISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQ 239
ISD D V+ELVAEIKPRYHIAGSKGVFYAREPY + A HVTRF+GLA VGNKEKQ
Sbjct: 191 ISDPHGYDPVVAELVAEIKPRYHIAGSKGVFYAREPYVSDSAAHVTRFIGLANVGNKEKQ 250
Query: 240 KFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYD 299
KFIHA+SPTPA+TMS+ DI + PNTTLSPY + +E KRP++ +D QYWRYD
Sbjct: 251 KFIHAISPTPASTMSSVDIHARPPNTTLSPYISPAKSVPVEETPKRPAED-ADLQYWRYD 309
Query: 300 VSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEK 359
V K+Q+HG G+++CFKF SGSCPRG KCN+RHD +ARE R VC DF+ KGKCEK
Sbjct: 310 V--KKQRHGEAGGNRLCFKFTSSGSCPRGSKCNYRHDEEAREHYNRNVCFDFLNKGKCEK 367
Query: 360 GPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKG 419
GPEC + HSL ++ + R + + CWFCLSSP VESHL++S+GE YYCAL KG
Sbjct: 368 GPECRFAHSLSDEGAVRDTKPRSERRRVESSCWFCLSSPDVESHLVISIGEGYYCALAKG 427
Query: 420 PLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHA 479
PLV +HVLVIPVEH +T+ E E ELGR++++L Y++ QGK A++FEW+S++ HA
Sbjct: 428 PLVPNHVLVIPVEHCSSTLKMPVEAEAELGRYKDALAKYFEKQGKIAIYFEWVSQQSRHA 487
Query: 480 NLQAVPIPTSKAAAVQDIFNLAAEKLGFKF-LATKSSKSSDGRRSLRAQFDRNCSFFYVE 538
NLQAVP+P SKA++V+ IF+LAA++LGF+F + ++ R LR++ D S FYVE
Sbjct: 488 NLQAVPVPLSKASSVKKIFHLAAQRLGFEFSVVNPDGDANRARELLRSECDSKSSLFYVE 547
Query: 539 LPEGTVLSHLIEENERFPAQFGREV 563
LPEG+VL HL++ NE+FPAQFGREV
Sbjct: 548 LPEGSVLLHLVDSNEKFPAQFGREV 572
|
Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q5RGJ5|C19L1_DANRE CWF19-like protein 1 OS=Danio rerio GN=cwf19l1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 177/577 (30%), Positives = 272/577 (47%), Gaps = 98/577 (16%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV GR+N LF RV ++ K +G FD +LCVG FF S E E+ Y G +
Sbjct: 5 PLRVLACGDVEGRINALFNRVNAIQKKSGQFDLLLCVGDFFGSSPEAEAEWATYKSGAKK 64
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI T +G AAS+ + DG ++ +N+ L G FT GL +A
Sbjct: 65 APIHTCILG-----------AASQETVKYFPSSDGCELAENITCLGRRGIFTGASGLQIA 113
Query: 122 YLSGRQS-SEGQQFGTYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTN--KAAASD 175
Y+SGR++ E ++ D+ AL A L VD+ LT++WP GV + +D
Sbjct: 114 YVSGREAHQEPAPSHCFTPKDITALVAPLLSNSKFRGVDILLTSQWPRGVCQYGNSPETD 173
Query: 176 M-LVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLG 229
M G+S ++++L ++KPRYH AG +GV Y R PY N + HV+RF+
Sbjct: 174 MKFCGVS-------SIADLADKLKPRYHFAGLEGVHYERLPYRNHVVLQENTQHVSRFIA 226
Query: 230 LAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDS 289
LA V N K+K+++A + P M + ++ + + T +PY L
Sbjct: 227 LATVNNPAKKKYLYAFNIIPMKNMDSTELVKQPQDVTENPYRKL---------------- 270
Query: 290 VSDSQYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCL 349
+ D + R S TDA+E+
Sbjct: 271 MKDGKKERQSASM----------------------------------TDAQEEPASQFFF 296
Query: 350 DFIIKGKCEKGPECSYKHSLQND-DSQRTHRSENASANRSKECWFCLSSPSVESHLIVSV 408
D +K P+ + Q+D D H+ + CWFCL+SP VE HL++S+
Sbjct: 297 DL-----GQKNPQRQHGRKRQSDGDRPNQHKQPRRPPQPTGPCWFCLASPEVEKHLVISI 351
Query: 409 GEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVF 468
G + Y AL KG L DHVL++P+ H + + + E +E+ +++++ + K++GK V
Sbjct: 352 GTHCYMALAKGGLTPDHVLLLPIGHYQSVVDLASEVVEEMEKYKSAFKKFCKSKGKRCVL 411
Query: 469 FEWLSKRGTHANLQAVPIPTSKAAA--VQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRA 526
FE + R H LQAVP+P K + +++ F AE+ + + + L+
Sbjct: 412 FE-RNYRSQHLQLQAVPVPMEKCSTEDIKEAFMTQAEEQQMELMEIPA------HTDLKQ 464
Query: 527 QFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREV 563
+FYVEL G L + I++N FP QFGREV
Sbjct: 465 IAPPGTPYFYVELDTGDKLFYRIKKN--FPLQFGREV 499
|
Danio rerio (taxid: 7955) |
| >sp|Q8AVL0|C19L1_XENLA CWF19-like protein 1 OS=Xenopus laevis GN=cwf19l1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 238 bits (607), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 181/573 (31%), Positives = 275/573 (47%), Gaps = 98/573 (17%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIP 64
R+L CGDV GR + LF RV+ + K +G FD +LCVG FF S E + Y G + P
Sbjct: 7 RVLTCGDVYGRFDVLFNRVRVIQKKSGQFDMLLCVGSFFGTSPESQTHWDEYKSGAKKAP 66
Query: 65 IPTYFIGDYGVGAAKVLLAASKNSANQGFK-MDGFKVTDNLFWLKGSGNFT-LHGLSVAY 122
I TY +G A+ + FK +DG ++ N+ +L G FT GL +AY
Sbjct: 67 IQTYVLG------------ANNQETVKHFKDVDGCELAANITYLGRKGLFTGASGLQIAY 114
Query: 123 LSG-RQSSEGQQFGTYSQDDVDALR-ALAEEPGI--VDLFLTNEWPSGVTNKAAASDMLV 178
LSG SSE ++ DV +L+ +L VD+ LT+ WP V+N A L
Sbjct: 115 LSGIESSSEPAPAYCFTAKDVTSLKMSLMSNSKFKGVDILLTSSWPKDVSNYGNA---LP 171
Query: 179 GISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLAPV 233
+ + +S L +KPRYH A +G Y R PY N +A HV+RF+ LA V
Sbjct: 172 NEASKKCGSALISNLAFNLKPRYHFAALEGENYERLPYRNHLVLQENAQHVSRFISLASV 231
Query: 234 GNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDS 293
GN +K+K+I+A + P + AD+ K+P D V+++
Sbjct: 232 GNLDKKKYIYAFNIVPMSLTDIADL------------------------VKQPLD-VTEN 266
Query: 294 QYWRYDVSQKRQK-HGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFI 352
Y + D + K + + ++ +F + + P+G+K TD
Sbjct: 267 PYRKSDKDTPKSKGNKSAEEEEPTQQFFFDLNKPQGKK----RQTDG------------- 309
Query: 353 IKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYY 412
KG + + KH + CWFCL+SP VE HL+VS+G+
Sbjct: 310 -KGGRQSQAKQPRKH-----------------PQPTGPCWFCLASPEVEKHLVVSIGDNC 351
Query: 413 YCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWL 472
Y AL KG L+ DHVL++P+ H +T+ S + KE+ +++ +L ++K +GK V FE
Sbjct: 352 YVALAKGGLMSDHVLILPIGHYQSTVDLSSDVVKEVEQYKAALRTFFKTKGKRYVMFER- 410
Query: 473 SKRGTHANLQAVPIPTS--KAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDR 530
+ + H LQ VP+P S +++ F L A++ G + L + SD ++ +
Sbjct: 411 NYKSQHLQLQVVPLPLSCCTTEDIKETFILQAQEQGMELLEI--PEHSDIKQIAQP---- 464
Query: 531 NCSFFYVELPEGTVLSHLIEENERFPAQFGREV 563
+FYVEL G L H I+++ FP QFGREV
Sbjct: 465 GTPYFYVELDSGEKLFHRIKKH--FPLQFGREV 495
|
Xenopus laevis (taxid: 8355) |
| >sp|O16216|C19L1_CAEEL CWF19-like protein 1 homolog OS=Caenorhabditis elegans GN=F17A9.2 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 164/568 (28%), Positives = 252/568 (44%), Gaps = 98/568 (17%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIP 64
+IL CGDV G +L K++ + K GPFD++ CVG+FF D + ++ +N G E P
Sbjct: 7 KILCCGDVNGNFVELIKKISTTEKKNGPFDSLFCVGEFFGDDDDSNEKVIN---GNIEFP 63
Query: 65 IPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF-TLHGLSVAYL 123
IPTY +G + + + + + + NL +L G T GL +AYL
Sbjct: 64 IPTYILG------------PANPRYSYLYPEESIEFSSNLTYLGKKGLLNTASGLQIAYL 111
Query: 124 SGRQSSEGQQFGTYSQDDVDALR-ALAEEPGI--VDLFLTNEWPSGVTNKAAASDMLVGI 180
SG + S + + + DV+ L L + G D+ LT+ WP+ + +
Sbjct: 112 SGVEGS-SKDLSCFDKADVEELLIPLGTQVGFSGTDILLTSVWPADIARHSHNQP----- 165
Query: 181 SDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLAPVGN 235
S +S+L A +KPRYH AG GV Y R+PY N A H TRF+GLA +GN
Sbjct: 166 SKPQPGSVLLSKLAAHLKPRYHFAGL-GVHYERQPYRNHRVLLEPARHTTRFIGLAAIGN 224
Query: 236 KEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQY 295
EKQK+++A + P M +++ + PN + PY L + +KE R + + +
Sbjct: 225 PEKQKWLYACNVKPMRKMEKEELTAQPPNASEFPYRELLEEIAAKETLSRMNGNGQRPEG 284
Query: 296 WRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKG 355
+Y + G G+G K RH+ + G
Sbjct: 285 SQYRFEMGGAEDGAGNGRK-------------------RHNDGGND-------------G 312
Query: 356 KCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCA 415
K P L N D+++ HL+V++G Y A
Sbjct: 313 PRNKQPVGPCWFCLSNVDAEK--------------------------HLVVAIGNKCYAA 346
Query: 416 LPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKR 475
+PKGPL EDHV+V+ V H+ + +S E E+ +F+++ + QGK V FE + R
Sbjct: 347 MPKGPLTEDHVMVLSVGHIQSQVSAPVEVRDEIEKFKSAFTLMANKQGKALVTFER-NFR 405
Query: 476 GTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFF 535
H +Q V I S + A++ F AA GF+ + + SL + C +F
Sbjct: 406 TQHLQVQMVMIDKSSSKALKSSFTTAAACAGFELVTMGPDE------SLLDMVNEGCPYF 459
Query: 536 YVELPEGTVLSHLIEENERFPAQFGREV 563
ELP+G+ L + FP FGREV
Sbjct: 460 VAELPDGSKL--FTRSMKGFPLHFGREV 485
|
Caenorhabditis elegans (taxid: 6239) |
| >sp|Q8CI33|C19L1_MOUSE CWF19-like protein 1 OS=Mus musculus GN=Cwf19l1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 168/578 (29%), Positives = 257/578 (44%), Gaps = 107/578 (18%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RV+++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDVLFNRVRTIQKKSGNFDLLLCVGNFFGSAQDA--EWEEYKTGNKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G A ++ +AN DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLG-----------ANNEETANYFQGADGCELAENITYLGRKGVFTGSSGLQIV 111
Query: 122 YLSGRQS-SEGQQFGTYSQDDVDALRAL---AEEPGIVDLFLTNEWPSGVTNKAAASDML 177
YLSG +S E ++S DV +LR + A + VD+ LT+ WP V + +S
Sbjct: 112 YLSGTESLDEPVPAHSFSPKDVSSLRTMLCSASQFKGVDILLTSPWPKYVGSFGNSS--- 168
Query: 178 VGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLA 231
G D+ N S +S L +KPRYH A + +Y R PY N A H TRF+ LA
Sbjct: 169 -GEVDTKNCGSALISSLAVSLKPRYHFAALEKSYYERLPYRNHVVLQESAQHATRFIALA 227
Query: 232 PVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVS 291
VGN EK+K+++A S P M+ A++ + P+ T +PY D G + P+
Sbjct: 228 NVGNPEKKKYLYAFSIVPMKLMAVAELVKQPPDVTENPYR--DSGKQAAGGKHIPAPQEE 285
Query: 292 DSQYWRYDVSQK--RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCL 349
+ + +D+S+K R++ G + C F
Sbjct: 286 SACQFFFDLSEKQGRKRPSTGRDTRPPHAKQPRKPPQPPGPCWF---------------- 329
Query: 350 DFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSV-ESH-LIVS 407
C PE KH + N C+ L+ + + H LI+
Sbjct: 330 -------CLASPEVE-KHLV---------------VNIGTHCYLALAKGGLSDDHVLILP 366
Query: 408 VGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAV 467
+G Y +VE E EK ++ +L ++K++GK V
Sbjct: 367 IGHYQSVVELSAEVVE-------------------EVEK----YKATLQRFFKSRGKRCV 403
Query: 468 FFEWLSKRGTHANLQAVPIPTSKAAA--VQDIFNLAAEKLGFKFLATKSSKSSDGRRSLR 525
FE + R H LQ +P+P S A ++D F A++ + L + SD ++ +
Sbjct: 404 LFE-RNYRSHHLQLQVIPVPLSCCATDDIKDAFITQAQEQQIELLEI--PEHSDIKQIAQ 460
Query: 526 AQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREV 563
++FYVEL G L H I++N FP QFGREV
Sbjct: 461 P----GAAYFYVELDTGEKLFHRIKKN--FPLQFGREV 492
|
Mus musculus (taxid: 10090) |
| >sp|Q69YN2|C19L1_HUMAN CWF19-like protein 1 OS=Homo sapiens GN=CWF19L1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 169/576 (29%), Positives = 254/576 (44%), Gaps = 102/576 (17%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RVQ++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDILFNRVQAIQKKSGNFDLLLCVGNFFGSTQDA--EWEEYKTGIKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G A ++ + DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLG-----------ANNQETVKYFQDADGCELAENITYLGRKGIFTGSSGLQIV 111
Query: 122 YLSGRQSSEGQQFG-TYSQDDVDALRAL---AEEPGIVDLFLTNEWPSGVTNKAAASDML 177
YLSG +S G ++S DV +LR + + VD+ LT+ WP V N +S
Sbjct: 112 YLSGTESLNEPVPGYSFSPKDVSSLRMMLCTTSQFKGVDILLTSPWPKCVGNFGNSS--- 168
Query: 178 VGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLA 231
G D+ S VS L +KPRYH A + +Y R PY N +A H TRF+ LA
Sbjct: 169 -GEVDTKKCGSALVSSLATGLKPRYHFAALEKTYYERLPYRNHIILQENAQHATRFIALA 227
Query: 232 PVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVS 291
VGN EK+K+++A S P M AA++ + P+ T +PY Q + + P + +
Sbjct: 228 NVGNPEKKKYLYAFSIVPMKLMDAAELVKQPPDVTENPYRKSGQEASIGKQILAPVEESA 287
Query: 292 DSQYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDF 351
++ + Q R++ G K S P H R+ F
Sbjct: 288 CQFFFDLNEKQGRKRSSTGRDSK---------SSP--------HPKQPRKPPQPPGPCWF 330
Query: 352 IIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSV-ESH-LIVSVG 409
C PE KH + N C+ L+ + + H LI+ +G
Sbjct: 331 -----CLASPEVE-KHLV---------------VNIGTHCYLALAKGGLSDDHVLILPIG 369
Query: 410 EYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFF 469
Y +VE+ VE T L RF +K++GK V F
Sbjct: 370 HYQSVVELSAEVVEE------VEKYKAT----------LRRF-------FKSRGKWCVVF 406
Query: 470 EWLSKRGTHANLQAVPIPTSKAAA--VQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQ 527
E + + H LQ +P+P S + ++D F A++ + L + SD ++ +
Sbjct: 407 E-RNYKSHHLQLQVIPVPISCSTTDDIKDAFITQAQEQQIELLEI--PEHSDIKQIAQP- 462
Query: 528 FDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREV 563
++FYVEL G L H I++N FP QFGREV
Sbjct: 463 ---GAAYFYVELDTGEKLFHRIKKN--FPLQFGREV 493
|
Homo sapiens (taxid: 9606) |
| >sp|Q5R8R4|C19L1_PONAB CWF19-like protein 1 OS=Pongo abelii GN=CWF19L1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 163/326 (50%), Gaps = 34/326 (10%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFF---PDSSELLDEFMNYVEG 59
P R+L CGDV G+ + LF RVQ++ K +G FD +LCVG FF PD+ E+ Y G
Sbjct: 5 PLRLLTCGDVEGKFDILFNRVQAIQKKSGNFDLLLCVGNFFGSTPDA-----EWEEYKTG 59
Query: 60 RSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGL 118
+ PI TY +G A ++ + DG ++ +N+ +L G FT GL
Sbjct: 60 TKKAPIQTYVLG-----------ANNQETVKYFQDADGCELAENITYLGRKGIFTGSSGL 108
Query: 119 SVAYLSGRQSSEGQQFG-TYSQDDVDALRAL---AEEPGIVDLFLTNEWPSGVTNKAAAS 174
+ YLSG +S G ++S DV +LR + + VD+ LT+ WP V N +S
Sbjct: 109 QIVYLSGTESLNEPVPGYSFSPKDVSSLRTMLCTTSQFKGVDILLTSPWPKYVGNFGNSS 168
Query: 175 DMLVGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFL 228
G D+ S VS L +KPRYH A + +Y R PY N +A H TRF+
Sbjct: 169 ----GEVDTKKCGSALVSSLATGLKPRYHFAALEKTYYERLPYRNHIVLQENAQHATRFI 224
Query: 229 GLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSD 288
LA VGN EK+K+++A S P M AA++ + P+ T +PY Q + + + P +
Sbjct: 225 ALANVGNPEKKKYLYAFSIVPMKLMDAAELVKQPPDVTENPYRKSGQEASTGKQILAPVE 284
Query: 289 SVSDSQYWRYDVSQKRQKHGGGDGDK 314
+ ++ + Q R++ G K
Sbjct: 285 ESACQFFFDLNEKQGRKRSSTGRDSK 310
|
Pongo abelii (taxid: 9601) |
| >sp|A1Z8J0|C19L1_DROME CWF19-like protein 1 homolog OS=Drosophila melanogaster GN=CG7741 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 161/330 (48%), Gaps = 52/330 (15%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIP 64
+IL+ GDV GR QLF+RV+ VNK AGPF+ + CVG FF + + +E + Y G I
Sbjct: 27 KILVVGDVRGRFKQLFQRVEQVNKKAGPFEILCCVGDFFGEDKQ-NEELIAYKNGFKHIT 85
Query: 65 IPTYFIGDYGVGAAKVLLAASKNSANQGFK--MDGFKVTDNLFWLKGSGNFTL-HGLSVA 121
+PTY +G ++ + F+ DG ++ NL +L G +TL G+ +A
Sbjct: 86 VPTYILG------------PNQREHEKYFENLTDG-EICTNLTYLGRRGVYTLSSGVKIA 132
Query: 122 YLSGRQS-----SEGQQFGTYSQDDVDALR-------ALAEEPGIVDLFLTNEWPSGVTN 169
YLSG ++ S G + +++ DV A+R + E VD+ LT++WP G+
Sbjct: 133 YLSGLEAQGTADSAGSEH-EFTKADVIAVRNSCLVSKNCSTEYRGVDVLLTSQWPFGMQE 191
Query: 170 KAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPY-----SNVDAVHV 224
K A+ VS L EIKPRYH G Y P+
Sbjct: 192 KENAT-----------ASKLVSFLCREIKPRYHFCAINGTHYESAPFRMPKDETTQFELC 240
Query: 225 TRFLGLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAK 284
TRF+ LA VGN EK K+I+ALS P D++ KT N P+ LD G A
Sbjct: 241 TRFISLAEVGNAEKAKYIYALSLKPVDKSRLLDLAQKTTNEIPCPFIGLDLG-----GAI 295
Query: 285 RPSDSVSDSQYWRYDVSQKRQKHGGGDGDK 314
+DS + QY+ YD+ R+K GGD +K
Sbjct: 296 GKNDSSENRQYF-YDMDGGRRKRQGGDNNK 324
|
Drosophila melanogaster (taxid: 7227) |
| >sp|Q10414|MU161_SCHPO CWF19-like protein mug161 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug161 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 147/602 (24%), Positives = 241/602 (40%), Gaps = 130/602 (21%)
Query: 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGR 60
+ P +L+ G GR+ + + + ++K G F +C+G F + + +
Sbjct: 7 LKPADVLVIGSADGRVIEAIEYIADLHKQHG-FKFAICLGNLFSHKRTTSADVVKLKNEK 65
Query: 61 SEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF-TLHGLS 119
++PIP YF GVG A + S M G +V NLF + G T + +
Sbjct: 66 VKVPIPVYF----GVGTAGL-----PESIISHMAMYGPEVAPNLFCMGICGFMKTFYKFT 116
Query: 120 VAYLSGRQSSEG-----QQF------GTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVT 168
+A L G + E ++F + + DV L D+ ++EWP V
Sbjct: 117 IAQLGGSYNEEKYYQPPEKFEQSLNEKCFHRSDVQKLSKRC------DILFSSEWPEDVQ 170
Query: 169 NKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHV---- 224
+ + + ++ L A P+Y V+Y REPY N A++V
Sbjct: 171 ENSTLPERKL-----PKGCMPLAALAANCMPQYFFVPGP-VYYEREPYKNSAAINVNTGT 224
Query: 225 -TRFLGLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAA 283
T F+ LAP N + +KF +A + P ++ + PN T SP+ H
Sbjct: 225 VTHFVALAPFKNSKNEKFSYAFTLYP---LTTEYMQPAPPNCTASPF------EHRPIPL 275
Query: 284 KRPS-DSVSDSQYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQ 342
KR S D + Q ++ S+ ++ N H +++
Sbjct: 276 KRASEDQIIPQQTNKFHKSKSSTA-------------LFKSKKDSSSSLNKMHKSES--- 319
Query: 343 CLRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASA---NRSK----ECWFCL 395
HS N+ H+SE+ ++ RSK C+FCL
Sbjct: 320 ------------------------HSALNN----LHKSESGTSLNNRRSKVGPGSCFFCL 351
Query: 396 SSPSVESHLIVSVGEYYYCALPKGPLVED-----------HVLVIPVEHVPNTISTSPEC 444
S+P+V HLIV++G Y ALPKGPL HVL+IP+ H + +ST +
Sbjct: 352 SNPNVALHLIVAIGNEAYMALPKGPLTTTASNTPALASSGHVLIIPIAHA-SALSTLSDT 410
Query: 445 E-----KELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQAVPIPTSKAAAVQDIFN 499
E+ RF+ ++ Y +A+ +E G H + Q +PIP + ++ +F
Sbjct: 411 SYEKTLNEMNRFRKAVTDMYNACDSDALVYEISRANGVHLHWQMIPIPKISSHRIESVFL 470
Query: 500 LAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQF 559
A++ G+ F R + ++F V LP G +L H ++ ERF QF
Sbjct: 471 EMAKEAGYDF----------EERDVEPH---ELNYFRVFLPSGKILIHRLQLRERFDLQF 517
Query: 560 GR 561
GR
Sbjct: 518 GR 519
|
Has a role in meiosis. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 567 | ||||||
| 255546111 | 606 | nucleic acid binding protein, putative [ | 0.991 | 0.927 | 0.743 | 0.0 | |
| 359484480 | 607 | PREDICTED: zinc finger CCCH domain-conta | 0.992 | 0.927 | 0.749 | 0.0 | |
| 449435870 | 606 | PREDICTED: zinc finger CCCH domain-conta | 0.992 | 0.929 | 0.736 | 0.0 | |
| 224112144 | 606 | predicted protein [Populus trichocarpa] | 0.978 | 0.915 | 0.734 | 0.0 | |
| 297738661 | 593 | unnamed protein product [Vitis vinifera] | 0.968 | 0.925 | 0.724 | 0.0 | |
| 356547875 | 601 | PREDICTED: zinc finger CCCH domain-conta | 0.984 | 0.928 | 0.716 | 0.0 | |
| 145362692 | 596 | zinc finger CCCH domain-containing prote | 0.973 | 0.926 | 0.716 | 0.0 | |
| 297796575 | 603 | hypothetical protein ARALYDRAFT_495780 [ | 0.973 | 0.915 | 0.707 | 0.0 | |
| 8777430 | 593 | unnamed protein product [Arabidopsis tha | 0.968 | 0.925 | 0.707 | 0.0 | |
| 356564790 | 552 | PREDICTED: zinc finger CCCH domain-conta | 0.892 | 0.916 | 0.735 | 0.0 |
| >gi|255546111|ref|XP_002514115.1| nucleic acid binding protein, putative [Ricinus communis] gi|223546571|gb|EEF48069.1| nucleic acid binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/566 (74%), Positives = 493/566 (87%), Gaps = 4/566 (0%)
Query: 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGR 60
M+PPRILLCGDVLGRLNQL+KRVQSVNKSAGPFDA+ CVGQFFP SSE L+EFM+Y++GR
Sbjct: 1 MAPPRILLCGDVLGRLNQLYKRVQSVNKSAGPFDALFCVGQFFPASSEQLEEFMDYIDGR 60
Query: 61 SEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSV 120
S IP+PTYFIGDYGV A KVL AASKN A GFKMDGF+++DNLFWLKGSG F LHGLS+
Sbjct: 61 SHIPLPTYFIGDYGVAAPKVLSAASKNHAKLGFKMDGFEISDNLFWLKGSGKFILHGLSI 120
Query: 121 AYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGI 180
AYLSGRQS++GQQ+GTYSQDD DALRA+AEEPG+VDLFLTNEWPSGVTN+A+ SD+ GI
Sbjct: 121 AYLSGRQSADGQQYGTYSQDDADALRAMAEEPGVVDLFLTNEWPSGVTNRASISDIPTGI 180
Query: 181 SDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQK 240
SDS +DSTVSELVAEIKPRYHIAG+KGVF+AREPYSN DAVHVTRFLGLA VGNK+KQK
Sbjct: 181 SDSVGSDSTVSELVAEIKPRYHIAGTKGVFFAREPYSNSDAVHVTRFLGLASVGNKDKQK 240
Query: 241 FIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDV 300
FIHA+SPTP +TM++A+ISMK NTTLSPYTF++Q + KE KRPSDS+SDSQYWRYDV
Sbjct: 241 FIHAISPTPGSTMTSAEISMKPSNTTLSPYTFIEQAAAPKEGTKRPSDSMSDSQYWRYDV 300
Query: 301 SQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKG 360
SQKR + G DGDK+CFKF++SGSCPR EKC+F HD DAREQ RGVC+DF++KGKCE+G
Sbjct: 301 SQKRHR-TGADGDKLCFKFVFSGSCPREEKCHFLHDMDAREQYSRGVCIDFLVKGKCERG 359
Query: 361 PECSYKHSLQNDDSQRTHRS---ENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALP 417
P+C++KH+L ++ +HR ENA+ NRSKECWFCLSSP VESHLI+S+GE YYCAL
Sbjct: 360 PDCNFKHNLLSEGESYSHRRRGFENANTNRSKECWFCLSSPGVESHLIISIGENYYCALA 419
Query: 418 KGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGT 477
KGPLV+DH+L++P+EH PNT+S ECE EL R + SL +YY QGKE + FEW SKRGT
Sbjct: 420 KGPLVQDHILLVPIEHSPNTLSLPQECESELVRLRKSLKLYYNKQGKETILFEWASKRGT 479
Query: 478 HANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYV 537
HANLQAVP+P+S+AAAVQDIFN+AAEKLGFKF+ K + +SDGR+ LR QFDRN SFFYV
Sbjct: 480 HANLQAVPVPSSRAAAVQDIFNMAAEKLGFKFVTMKFNNNSDGRKWLRTQFDRNYSFFYV 539
Query: 538 ELPEGTVLSHLIEENERFPAQFGREV 563
ELP+GTVLSH ++ENE FPAQFGREV
Sbjct: 540 ELPDGTVLSHSVKENESFPAQFGREV 565
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359484480|ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/566 (74%), Positives = 491/566 (86%), Gaps = 3/566 (0%)
Query: 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGR 60
M+PPRILLCGDVLGRLNQL KR+ SVNKSAGPFDAVLCVGQFFPDS E L EFM+Y+EGR
Sbjct: 1 MAPPRILLCGDVLGRLNQLVKRILSVNKSAGPFDAVLCVGQFFPDSPERLLEFMDYIEGR 60
Query: 61 SEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSV 120
S+IP+PTYFIGDYG+GAAKVL AASK+SAN GFKMDG ++ DNL+WLKGSG FTLHGLSV
Sbjct: 61 SQIPLPTYFIGDYGIGAAKVLSAASKDSANLGFKMDGLRICDNLYWLKGSGKFTLHGLSV 120
Query: 121 AYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGI 180
Y+SGR+S +GQQFG YSQDDVDALRALA+E GIVDLFLTNEWPSGVT A S++ GI
Sbjct: 121 VYISGRRSLDGQQFGKYSQDDVDALRALADESGIVDLFLTNEWPSGVTKGAVTSNIPPGI 180
Query: 181 SDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQK 240
SDSS DS +SELV EIKPRYHIAG+KG+FY REPYSN+DAVHVTRFLGLAPVGNK+KQK
Sbjct: 181 SDSSGCDSAISELVGEIKPRYHIAGTKGIFYDREPYSNLDAVHVTRFLGLAPVGNKDKQK 240
Query: 241 FIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDV 300
FIHA+SP PA+TMS+A+ISMK PNTTL PY +++ + + +A KRPSDS+SD+QYWRYDV
Sbjct: 241 FIHAISPIPASTMSSAEISMKPPNTTLFPYKIIEETAPTNQATKRPSDSISDTQYWRYDV 300
Query: 301 SQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKG 360
SQKRQKHG GDGDK+CFKF+ SGSCPRG KCNF HDT+AREQ +RGVC DFI KGKCE+G
Sbjct: 301 SQKRQKHGAGDGDKLCFKFVSSGSCPRGNKCNFLHDTEAREQYMRGVCFDFINKGKCERG 360
Query: 361 PECSYKHSLQNDD---SQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALP 417
P+C++KHSLQ++D + R SENA ++RSK CWFCLSSP VESHLI+S+GE YYCAL
Sbjct: 361 PDCNFKHSLQDEDEGFASRRSGSENAKSSRSKRCWFCLSSPDVESHLIISIGESYYCALA 420
Query: 418 KGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGT 477
KGPLVED VLVIPVEH NT+S PECE EL RFQ SL MY++ QGKE VFFEW+ KRGT
Sbjct: 421 KGPLVEDQVLVIPVEHSANTLSLPPECEIELDRFQKSLKMYFRTQGKEVVFFEWIFKRGT 480
Query: 478 HANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYV 537
HAN+QAVPIP S+A+AV++IF LAAEKLGF+F+ TKS+ S+GR+SLRAQFD SFFYV
Sbjct: 481 HANIQAVPIPLSRASAVKNIFILAAEKLGFQFVTTKSNNDSEGRKSLRAQFDDKISFFYV 540
Query: 538 ELPEGTVLSHLIEENERFPAQFGREV 563
ELP+GT+LSH IE+NE+FP QFGREV
Sbjct: 541 ELPDGTILSHAIEDNEKFPVQFGREV 566
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449435870|ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Cucumis sativus] gi|449489882|ref|XP_004158448.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/565 (73%), Positives = 480/565 (84%), Gaps = 2/565 (0%)
Query: 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGR 60
MSPPRILLCGDV GRLNQL+KRV SVNKSAGPFD +LCVGQFFPDS++ LDEFM+YVEGR
Sbjct: 1 MSPPRILLCGDVFGRLNQLYKRVVSVNKSAGPFDVLLCVGQFFPDSTDQLDEFMDYVEGR 60
Query: 61 SEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSV 120
S IP+ TYFIGDYGVGAAKVLLA+SK+SANQGFKMDG K+ NL WLKGSG FTLHGLSV
Sbjct: 61 SVIPLSTYFIGDYGVGAAKVLLASSKDSANQGFKMDGLKICANLHWLKGSGKFTLHGLSV 120
Query: 121 AYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGI 180
AYLSGR SS+G FGTY+QDDVDALRA+AEEPG+VDLFL+NEWP+ VTN+ SD+ G+
Sbjct: 121 AYLSGRCSSDGLPFGTYTQDDVDALRAIAEEPGVVDLFLSNEWPTEVTNRVPTSDIPPGV 180
Query: 181 SDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQK 240
SD S +D+T+SELV EIKPRYHIAG+KGVF+AREPYSNVDAVHVTRFLGLA VGNKEKQK
Sbjct: 181 SDLSGSDATISELVVEIKPRYHIAGTKGVFFAREPYSNVDAVHVTRFLGLASVGNKEKQK 240
Query: 241 FIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDV 300
FIHA+SP P++TMSA +ISMK PNTTLSPYT ++ S + ++AKR S+SVS+SQYWRY+V
Sbjct: 241 FIHAISPIPSSTMSAVEISMKPPNTTLSPYTLTERKSEASDSAKRSSNSVSESQYWRYEV 300
Query: 301 SQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKG 360
SQKRQK+G D +K+CFKF SGSCPRGEKCNF HD DAREQ RGVC DF+ KGKCE+G
Sbjct: 301 SQKRQKYGTSDTNKLCFKFTSSGSCPRGEKCNFHHDMDAREQSQRGVCFDFLNKGKCERG 360
Query: 361 PECSYKHSLQN--DDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPK 418
P+C++KHS QN D RS NA NRSKECWFCLSSP++ESHLIVSVGE +YCAL K
Sbjct: 361 PDCNFKHSFQNEFDSHSGKRRSGNAGTNRSKECWFCLSSPNIESHLIVSVGESFYCALAK 420
Query: 419 GPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTH 478
GPLV DH+LVIPVEH PNT+S P+ E E+ R QN L Y+K+QGKE VFFEW+SKR TH
Sbjct: 421 GPLVPDHILVIPVEHFPNTLSLGPDYETEINRLQNCLRKYFKSQGKEVVFFEWVSKRSTH 480
Query: 479 ANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVE 538
ANLQAVPIP+S+A VQ+IF++AAEKLGFKF+ +KS S+GR+SLR QFD + SFFY E
Sbjct: 481 ANLQAVPIPSSRAHVVQNIFDMAAEKLGFKFVISKSDAPSEGRKSLRTQFDSDHSFFYAE 540
Query: 539 LPEGTVLSHLIEENERFPAQFGREV 563
LPE LSH+IEENE FPAQFGREV
Sbjct: 541 LPECVTLSHVIEENEIFPAQFGREV 565
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224112144|ref|XP_002332828.1| predicted protein [Populus trichocarpa] gi|222833259|gb|EEE71736.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/573 (73%), Positives = 484/573 (84%), Gaps = 18/573 (3%)
Query: 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEG- 59
MS PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDA+ CVGQFFPDS+E L+EF +Y+EG
Sbjct: 1 MSTPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDALFCVGQFFPDSAEQLEEFTDYIEGG 60
Query: 60 --RSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHG 117
RS+IP+PTYFIGDYGV A KVL AS+NSAN GFKMDGFK+ DNLFWL+GSG FTLHG
Sbjct: 61 GGRSQIPLPTYFIGDYGVAAPKVLSTASRNSANLGFKMDGFKICDNLFWLRGSGKFTLHG 120
Query: 118 LSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDML 177
LSV YLSGRQSS GQ FGTYSQDDVDALRALAEEPG+VD GVTN+A+ASD+
Sbjct: 121 LSVVYLSGRQSSNGQHFGTYSQDDVDALRALAEEPGVVDF--------GVTNRASASDIP 172
Query: 178 VGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKE 237
G D++ +DS+VSELVAEIKPRYH AG+KGVFYAREPYSNVDAVHVTRF GLA VGNK+
Sbjct: 173 AGFLDTTGSDSSVSELVAEIKPRYHFAGTKGVFYAREPYSNVDAVHVTRFFGLAMVGNKD 232
Query: 238 KQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWR 297
KQKFIHA+SPTPA+TMSAA+ISMK PNTTLSPYT + + +E KR + SVSDSQYWR
Sbjct: 233 KQKFIHAISPTPASTMSAAEISMKPPNTTLSPYTLVVDKTALEEVTKRSTASVSDSQYWR 292
Query: 298 YDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKC 357
YDVS KR K G G+G+K+CFKFIYSGSCPRGEKCNF+HD DAREQ L GVCLDF+IKGKC
Sbjct: 293 YDVSHKRHKSGSGEGNKLCFKFIYSGSCPRGEKCNFQHDMDAREQYLGGVCLDFLIKGKC 352
Query: 358 EKGPECSYKHSLQND---DSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYC 414
E+GP+C++KH+LQN+ S+R SEN + NRSKECWFCLSSP+VESHLI+S+GE+YYC
Sbjct: 353 ERGPDCNFKHNLQNEGESHSRRRRGSENDNGNRSKECWFCLSSPNVESHLIISIGEFYYC 412
Query: 415 ALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSK 474
ALPKGPLV+DHVLVIP+EH P T+S + + EL +FQNSL +YYKN+GKEA+ FEW+SK
Sbjct: 413 ALPKGPLVQDHVLVIPIEHAPCTLSLTQQSNSELVKFQNSLKLYYKNRGKEAILFEWISK 472
Query: 475 RGTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATK----SSKSSDGRRSLRAQFDR 530
R +HAN+Q VP+P++KAAAVQDI NLAAEKLGFKF+ K + SSDGR LR QFDR
Sbjct: 473 RSSHANIQVVPVPSTKAAAVQDICNLAAEKLGFKFVVMKFILAVNNSSDGREWLRTQFDR 532
Query: 531 NCSFFYVELPEGTVLSHLIEENERFPAQFGREV 563
N SFFYVEL EGT+LSH +EENE FPAQFGREV
Sbjct: 533 NYSFFYVELTEGTILSHSVEENENFPAQFGREV 565
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297738661|emb|CBI27906.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/566 (72%), Positives = 478/566 (84%), Gaps = 17/566 (3%)
Query: 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGR 60
M+PPRILLCGDVLGRLNQL KR+ SVNKSAGPFDAVLCVGQFFPDS E L EFM+Y+EGR
Sbjct: 1 MAPPRILLCGDVLGRLNQLVKRILSVNKSAGPFDAVLCVGQFFPDSPERLLEFMDYIEGR 60
Query: 61 SEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSV 120
S+IP+PTYFIGDYG+GAAKVL AASK+SAN GFKMDG ++ DNL+WLKGSG FTLHGLSV
Sbjct: 61 SQIPLPTYFIGDYGIGAAKVLSAASKDSANLGFKMDGLRICDNLYWLKGSGKFTLHGLSV 120
Query: 121 AYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGI 180
Y+SGR+S +GQQFG YSQDDVDALRALA++ GVT A S++ GI
Sbjct: 121 VYISGRRSLDGQQFGKYSQDDVDALRALADD--------------GVTKGAVTSNIPPGI 166
Query: 181 SDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQK 240
SDSS DS +SELV EIKPRYHIAG+KG+FY REPYSN+DAVHVTRFLGLAPVGNK+KQK
Sbjct: 167 SDSSGCDSAISELVGEIKPRYHIAGTKGIFYDREPYSNLDAVHVTRFLGLAPVGNKDKQK 226
Query: 241 FIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDV 300
FIHA+SP PA+TMS+A+ISMK PNTTL PY +++ + + +A KRPSDS+SD+QYWRYDV
Sbjct: 227 FIHAISPIPASTMSSAEISMKPPNTTLFPYKIIEETAPTNQATKRPSDSISDTQYWRYDV 286
Query: 301 SQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKG 360
SQKRQKHG GDGDK+CFKF+ SGSCPRG KCNF HDT+AREQ +RGVC DFI KGKCE+G
Sbjct: 287 SQKRQKHGAGDGDKLCFKFVSSGSCPRGNKCNFLHDTEAREQYMRGVCFDFINKGKCERG 346
Query: 361 PECSYKHSLQNDD---SQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALP 417
P+C++KHSLQ++D + R SENA ++RSK CWFCLSSP VESHLI+S+GE YYCAL
Sbjct: 347 PDCNFKHSLQDEDEGFASRRSGSENAKSSRSKRCWFCLSSPDVESHLIISIGESYYCALA 406
Query: 418 KGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGT 477
KGPLVED VLVIPVEH NT+S PECE EL RFQ SL MY++ QGKE VFFEW+ KRGT
Sbjct: 407 KGPLVEDQVLVIPVEHSANTLSLPPECEIELDRFQKSLKMYFRTQGKEVVFFEWIFKRGT 466
Query: 478 HANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYV 537
HAN+QAVPIP S+A+AV++IF LAAEKLGF+F+ TKS+ S+GR+SLRAQFD SFFYV
Sbjct: 467 HANIQAVPIPLSRASAVKNIFILAAEKLGFQFVTTKSNNDSEGRKSLRAQFDDKISFFYV 526
Query: 538 ELPEGTVLSHLIEENERFPAQFGREV 563
ELP+GT+LSH IE+NE+FP QFGREV
Sbjct: 527 ELPDGTILSHAIEDNEKFPVQFGREV 552
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356547875|ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/560 (71%), Positives = 475/560 (84%), Gaps = 2/560 (0%)
Query: 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
PRILLCGDVLGRLNQLFKRV SVNKSAGPFDA+LCVGQFFPDS E L++F Y+EG S
Sbjct: 3 PRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQLEDFTKYIEGGSHF 62
Query: 64 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL 123
P+PTYF+GDYGV A K+LL ASK+SANQGFKMDGFKV NL+WLKGSG F+L GLSVAYL
Sbjct: 63 PLPTYFVGDYGVAAPKLLLQASKDSANQGFKMDGFKVCHNLYWLKGSGKFSLFGLSVAYL 122
Query: 124 SGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDS 183
SGR+SS QQFGTY++DDVDALRA+AEEPGIVDLFLTNEWPSGVTN+AA SD+ G+SD+
Sbjct: 123 SGRKSSSAQQFGTYTEDDVDALRAIAEEPGIVDLFLTNEWPSGVTNRAADSDIPAGLSDA 182
Query: 184 SNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIH 243
+ DSTVSELV EIKPRYHIAG+KG++YAREPYSNVDAVHVTRF+GLA VGNK+KQKFIH
Sbjct: 183 AGGDSTVSELVQEIKPRYHIAGTKGIYYAREPYSNVDAVHVTRFIGLASVGNKDKQKFIH 242
Query: 244 ALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQK 303
A+SPTPA+TMS+ +I+MKT NTTLSPYT+ ++ + ++ KR SDS+SD QYWRYDVSQK
Sbjct: 243 AISPTPASTMSSTEIAMKTTNTTLSPYTYEEKRTSPMDSTKRSSDSISDPQYWRYDVSQK 302
Query: 304 RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPEC 363
RQKH G GDK+CFKF+ SGSCPRGEKCNFRHDTDAREQC+RGVC DF+ KGKCE+GP+C
Sbjct: 303 RQKHEAGHGDKLCFKFVSSGSCPRGEKCNFRHDTDAREQCMRGVCFDFLNKGKCERGPDC 362
Query: 364 SYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVE 423
++KHSLQ++ + R + RSKECWFCLSSP+VESHLI+S+GE YY AL KGPLVE
Sbjct: 363 NFKHSLQDEGGRLPSR--RPGSGRSKECWFCLSSPNVESHLIISIGENYYLALAKGPLVE 420
Query: 424 DHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQA 483
DHVL+IPVEH+P+T+S S E E EL RFQNSL Y K+Q KE +FFEW+S RGTHAN+QA
Sbjct: 421 DHVLIIPVEHMPSTLSMSSESEIELSRFQNSLKSYCKSQEKEVIFFEWVSVRGTHANIQA 480
Query: 484 VPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGT 543
+PIP+SKA + IFNLAA+KLGF+F+ K S+GR+ L+AQ D + S FY ++P GT
Sbjct: 481 IPIPSSKAIMAEKIFNLAAQKLGFEFVTKKFDSISEGRKFLKAQIDGDSSLFYAQIPGGT 540
Query: 544 VLSHLIEENERFPAQFGREV 563
+L H +EE E+FPAQFGREV
Sbjct: 541 ILLHHVEEKEKFPAQFGREV 560
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|145362692|ref|NP_974945.2| zinc finger CCCH domain-containing protein 64 [Arabidopsis thaliana] gi|75243460|sp|Q84WU9.1|C3H64_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 64; Short=AtC3H64 gi|27754231|gb|AAO22569.1| unknown protein [Arabidopsis thaliana] gi|332009438|gb|AED96821.1| zinc finger CCCH domain-containing protein 64 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/561 (71%), Positives = 466/561 (83%), Gaps = 9/561 (1%)
Query: 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
PRILLCGD LGRLNQLFKRVQSV+KSAGPFDA++CVGQFFPDS E+LDEF++YVEGR+++
Sbjct: 3 PRILLCGDPLGRLNQLFKRVQSVSKSAGPFDALICVGQFFPDSPEILDEFLDYVEGRAQV 62
Query: 64 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL 123
PIPTYF GDYGV A K+L SK + NQGFKMDG +V NLFWL+GSG F+LHGLSVAYL
Sbjct: 63 PIPTYFTGDYGVVAPKILSTTSKKAENQGFKMDGLEVCHNLFWLRGSGKFSLHGLSVAYL 122
Query: 124 SGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDS 183
SGRQSSE Q FG YSQDDVDALRALAEEPG VDLFLTNEWP+GVTN+AA SD+ VGISDS
Sbjct: 123 SGRQSSESQ-FGKYSQDDVDALRALAEEPGGVDLFLTNEWPAGVTNRAAVSDIPVGISDS 181
Query: 184 SNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIH 243
S +DSTVSELV E+KPRYHIAGS GVFYAREPY N ++ HVTRF+GLA VGNK KQKF+H
Sbjct: 182 SCSDSTVSELVMEVKPRYHIAGSMGVFYAREPYLNAESTHVTRFIGLAQVGNKNKQKFLH 241
Query: 244 ALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQK 303
ALSPTP +TMS A++S K P TTL PY D + SK KRP+DS SDSQYWRYDV K
Sbjct: 242 ALSPTPTSTMSPAELSAKPPKTTLWPYNLQDGAAESK---KRPNDSDSDSQYWRYDVP-K 297
Query: 304 RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPEC 363
RQK G G+K+CFKF+ SGSCPRGE C+F+H+ +AREQC RGVCLD IIKGKCEKGPEC
Sbjct: 298 RQK-SGSQGEKLCFKFVCSGSCPRGEDCHFQHNAEAREQCRRGVCLDLIIKGKCEKGPEC 356
Query: 364 SYKHSLQNDDS-QRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLV 422
SYKH Q++ S QR RSENA NRSKECWFCLSSPSVESHLIVSVGE +YCALPKG LV
Sbjct: 357 SYKHEFQDESSIQRKPRSENA--NRSKECWFCLSSPSVESHLIVSVGESFYCALPKGSLV 414
Query: 423 EDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQ 482
EDH+L+IP+EH+PNT+ SPE E EL R+QN L YK+QG +AVFFE +SKR +HANLQ
Sbjct: 415 EDHILIIPIEHLPNTLVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELVSKRVSHANLQ 474
Query: 483 AVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEG 542
VP+P+S+A + +IF+LAAEKLGFK + K + S+DGR+ L+ +++ FYVELP+G
Sbjct: 475 VVPVPSSRARLLPNIFSLAAEKLGFKLVTKKFNDSTDGRKYLQKEYNAALGLFYVELPDG 534
Query: 543 TVLSHLIEENERFPAQFGREV 563
TVLSH +EENE FPAQFGREV
Sbjct: 535 TVLSHTLEENEVFPAQFGREV 555
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297796575|ref|XP_002866172.1| hypothetical protein ARALYDRAFT_495780 [Arabidopsis lyrata subsp. lyrata] gi|297312007|gb|EFH42431.1| hypothetical protein ARALYDRAFT_495780 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/568 (70%), Positives = 468/568 (82%), Gaps = 16/568 (2%)
Query: 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
PRILLCGD LGRLNQLFKRVQSV+KSAGPFDA++CVGQFFPD+ ELLDEF++YVEGR+++
Sbjct: 3 PRILLCGDPLGRLNQLFKRVQSVSKSAGPFDALICVGQFFPDTPELLDEFLDYVEGRTQV 62
Query: 64 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL 123
PIPTYF GDYGV A K+L SK + NQGFKMDG +V NLFWL+GSG FTLHGLSVAYL
Sbjct: 63 PIPTYFTGDYGVVAPKILSMTSKKAENQGFKMDGLEVCHNLFWLRGSGKFTLHGLSVAYL 122
Query: 124 SGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLT-------NEWPSGVTNKAAASDM 176
SGRQSS+ Q FG YSQDDVDALRALAEE G+VDLFLT NEWP+GVTN+AA SD+
Sbjct: 123 SGRQSSDSQ-FGKYSQDDVDALRALAEESGVVDLFLTYPFFLYTNEWPAGVTNRAAVSDI 181
Query: 177 LVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNK 236
VG+SDSS +DSTVSELV E+KPRYHIAGS GVFYAREPY N ++ HVTRF+GLA VGNK
Sbjct: 182 PVGVSDSSCSDSTVSELVMEVKPRYHIAGSMGVFYAREPYLNAESTHVTRFIGLAQVGNK 241
Query: 237 EKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYW 296
KQKF+HALSPTP +TMS A++S K P TTL PY + + SK KRP+DS SDSQYW
Sbjct: 242 NKQKFLHALSPTPTSTMSPAELSAKPPKTTLWPYNLQESAAESK---KRPNDSESDSQYW 298
Query: 297 RYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGK 356
RYDVS KRQK+G G+K+CFKF+ SGSCPRGE C+F+H+ +AREQC RGVCLD IIKGK
Sbjct: 299 RYDVS-KRQKNGS-QGEKLCFKFVCSGSCPRGEDCHFQHNAEAREQCRRGVCLDLIIKGK 356
Query: 357 CEKGPECSYKHSLQNDDS-QRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCA 415
CEKGPECSYKH Q++ S QR RSENA NRSKECWFCLSSPSVESHLIVSVGE +YCA
Sbjct: 357 CEKGPECSYKHEFQDESSIQRKPRSENA--NRSKECWFCLSSPSVESHLIVSVGESFYCA 414
Query: 416 LPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKR 475
LPKG LVEDH+L+IP+EH+PNT+ SPE E EL R+QN L YK+QG +AVFFE +SKR
Sbjct: 415 LPKGSLVEDHILIIPIEHLPNTLVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELVSKR 474
Query: 476 GTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFF 535
+HANLQ VP+P+S+A + +IF+LAAEKLGFK + K S SSDGR+ L+ +++ F
Sbjct: 475 VSHANLQVVPVPSSRARLLPNIFSLAAEKLGFKLVTKKFSDSSDGRKYLQKEYNAALGLF 534
Query: 536 YVELPEGTVLSHLIEENERFPAQFGREV 563
YVELP+GTVLSH +EENE FPAQFGREV
Sbjct: 535 YVELPDGTVLSHTLEENEVFPAQFGREV 562
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|8777430|dbj|BAA97020.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/561 (70%), Positives = 462/561 (82%), Gaps = 12/561 (2%)
Query: 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
PRILLCGD LGRLNQLFKRVQSV+KSAGPFDA++CVGQFFPDS E+LDEF++YVEGR+++
Sbjct: 3 PRILLCGDPLGRLNQLFKRVQSVSKSAGPFDALICVGQFFPDSPEILDEFLDYVEGRAQV 62
Query: 64 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL 123
PIPTYF GDYGV A K+L SK + NQGFKMDG +V NLFWL+GSG F+LHGLSVAYL
Sbjct: 63 PIPTYFTGDYGVVAPKILSTTSKKAENQGFKMDGLEVCHNLFWLRGSGKFSLHGLSVAYL 122
Query: 124 SGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDS 183
SGRQSSE Q FG YSQDDVDALRALAEEPG +TNEWP+GVTN+AA SD+ VGISDS
Sbjct: 123 SGRQSSESQ-FGKYSQDDVDALRALAEEPGGC---ITNEWPAGVTNRAAVSDIPVGISDS 178
Query: 184 SNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIH 243
S +DSTVSELV E+KPRYHIAGS GVFYAREPY N ++ HVTRF+GLA VGNK KQKF+H
Sbjct: 179 SCSDSTVSELVMEVKPRYHIAGSMGVFYAREPYLNAESTHVTRFIGLAQVGNKNKQKFLH 238
Query: 244 ALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQK 303
ALSPTP +TMS A++S K P TTL PY D + SK KRP+DS SDSQYWRYDV K
Sbjct: 239 ALSPTPTSTMSPAELSAKPPKTTLWPYNLQDGAAESK---KRPNDSDSDSQYWRYDVP-K 294
Query: 304 RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPEC 363
RQK G G+K+CFKF+ SGSCPRGE C+F+H+ +AREQC RGVCLD IIKGKCEKGPEC
Sbjct: 295 RQK-SGSQGEKLCFKFVCSGSCPRGEDCHFQHNAEAREQCRRGVCLDLIIKGKCEKGPEC 353
Query: 364 SYKHSLQNDDS-QRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLV 422
SYKH Q++ S QR RSENA NRSKECWFCLSSPSVESHLIVSVGE +YCALPKG LV
Sbjct: 354 SYKHEFQDESSIQRKPRSENA--NRSKECWFCLSSPSVESHLIVSVGESFYCALPKGSLV 411
Query: 423 EDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQ 482
EDH+L+IP+EH+PNT+ SPE E EL R+QN L YK+QG +AVFFE +SKR +HANLQ
Sbjct: 412 EDHILIIPIEHLPNTLVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELVSKRVSHANLQ 471
Query: 483 AVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEG 542
VP+P+S+A + +IF+LAAEKLGFK + K + S+DGR+ L+ +++ FYVELP+G
Sbjct: 472 VVPVPSSRARLLPNIFSLAAEKLGFKLVTKKFNDSTDGRKYLQKEYNAALGLFYVELPDG 531
Query: 543 TVLSHLIEENERFPAQFGREV 563
TVLSH +EENE FPAQFGREV
Sbjct: 532 TVLSHTLEENEVFPAQFGREV 552
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564790|ref|XP_003550631.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/510 (73%), Positives = 441/510 (86%), Gaps = 4/510 (0%)
Query: 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
PRILLCGDVLGRLNQLFKRV SVNKSAGPFDA+LCVGQFFPDS E L++F Y+EG S
Sbjct: 3 PRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQLEDFTKYIEGGSHF 62
Query: 64 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL 123
P+PTYFIGDYGV A K+LL ASK+SANQGFKMDGFKV NL+WLKGSG F L GLSVAYL
Sbjct: 63 PLPTYFIGDYGVAAPKLLLQASKDSANQGFKMDGFKVCHNLYWLKGSGKFPLFGLSVAYL 122
Query: 124 SGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDS 183
SGR+SS GQQFG Y++DDVDALRA+AEEPG+VDLFLTNEWP+GVTN+AA SD+ G+SD
Sbjct: 123 SGRKSSSGQQFGNYTEDDVDALRAIAEEPGVVDLFLTNEWPNGVTNRAADSDIPAGLSDG 182
Query: 184 SNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIH 243
S DSTVSELV EIKPRYHIAG+KG++YAREPYSNVDAVHVTRF+GLA VGN++KQKFIH
Sbjct: 183 S--DSTVSELVQEIKPRYHIAGTKGIYYAREPYSNVDAVHVTRFIGLASVGNRDKQKFIH 240
Query: 244 ALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQK 303
A+SPTPA+TMS+ +I+MKT NTTLSPYTF ++ + ++AKR SDS+SD QYWRYDV+QK
Sbjct: 241 AISPTPASTMSSTEIAMKTTNTTLSPYTFKEKRTSPMDSAKRSSDSISDPQYWRYDVAQK 300
Query: 304 RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPEC 363
RQKH G GDK+CFKF+ SGSCPRGEKCNF+HDTDAREQC+RGVC DF+ KGKCE+GP+C
Sbjct: 301 RQKHEAGHGDKLCFKFVSSGSCPRGEKCNFQHDTDAREQCMRGVCFDFLNKGKCERGPDC 360
Query: 364 SYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVE 423
++KHSLQ++ ++ R + RSKECWFCLSSP+VESHLI+S+GE YY AL KGPLVE
Sbjct: 361 NFKHSLQDEGNRLPSR--RPGSGRSKECWFCLSSPNVESHLIISIGENYYLALAKGPLVE 418
Query: 424 DHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQA 483
DHVL+IPVEH+P+T+S PE E EL RFQNSL Y K+Q KE +FFEW+S RGTHANLQA
Sbjct: 419 DHVLIIPVEHMPSTLSMPPESEIELSRFQNSLRSYCKSQEKEFIFFEWVSIRGTHANLQA 478
Query: 484 VPIPTSKAAAVQDIFNLAAEKLGFKFLATK 513
+PIP+SKA V+ +FNLAA+KLGF+F+A K
Sbjct: 479 IPIPSSKAIMVEKVFNLAAQKLGFEFVAKK 508
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 567 | ||||||
| TAIR|locus:2164630 | 596 | AT5G56900 [Arabidopsis thalian | 0.973 | 0.926 | 0.716 | 3.4e-219 | |
| ZFIN|ZDB-GENE-031204-5 | 544 | cwf19l1 "CWF19-like 1, cell cy | 0.518 | 0.540 | 0.329 | 2.9e-70 | |
| MGI|MGI:1919752 | 537 | Cwf19l1 "CWF19-like 1, cell cy | 0.499 | 0.527 | 0.341 | 7.7e-70 | |
| UNIPROTKB|F1S8V2 | 540 | CWF19L1 "Uncharacterized prote | 0.513 | 0.538 | 0.333 | 6.8e-69 | |
| UNIPROTKB|E1BG07 | 539 | CWF19L1 "Uncharacterized prote | 0.513 | 0.539 | 0.330 | 1.1e-68 | |
| RGD|1304716 | 537 | Cwf19l1 "CWF19-like 1, cell cy | 0.513 | 0.541 | 0.330 | 3.7e-68 | |
| UNIPROTKB|Q69YN2 | 538 | CWF19L1 "CWF19-like protein 1" | 0.511 | 0.539 | 0.341 | 1.8e-66 | |
| UNIPROTKB|E2RJE9 | 537 | CWF19L1 "Uncharacterized prote | 0.511 | 0.540 | 0.332 | 3.3e-66 | |
| UNIPROTKB|F1NLI3 | 483 | F1NLI3 "Uncharacterized protei | 0.504 | 0.592 | 0.333 | 1.4e-64 | |
| UNIPROTKB|E1C959 | 548 | E1C959 "Uncharacterized protei | 0.453 | 0.468 | 0.358 | 2.4e-63 |
| TAIR|locus:2164630 AT5G56900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2117 (750.3 bits), Expect = 3.4e-219, P = 3.4e-219
Identities = 402/561 (71%), Positives = 466/561 (83%)
Query: 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
PRILLCGD LGRLNQLFKRVQSV+KSAGPFDA++CVGQFFPDS E+LDEF++YVEGR+++
Sbjct: 3 PRILLCGDPLGRLNQLFKRVQSVSKSAGPFDALICVGQFFPDSPEILDEFLDYVEGRAQV 62
Query: 64 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL 123
PIPTYF GDYGV A K+L SK + NQGFKMDG +V NLFWL+GSG F+LHGLSVAYL
Sbjct: 63 PIPTYFTGDYGVVAPKILSTTSKKAENQGFKMDGLEVCHNLFWLRGSGKFSLHGLSVAYL 122
Query: 124 SGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDS 183
SGRQSSE Q FG YSQDDVDALRALAEEPG VDLFLTNEWP+GVTN+AA SD+ VGISDS
Sbjct: 123 SGRQSSESQ-FGKYSQDDVDALRALAEEPGGVDLFLTNEWPAGVTNRAAVSDIPVGISDS 181
Query: 184 SNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIH 243
S +DSTVSELV E+KPRYHIAGS GVFYAREPY N ++ HVTRF+GLA VGNK KQKF+H
Sbjct: 182 SCSDSTVSELVMEVKPRYHIAGSMGVFYAREPYLNAESTHVTRFIGLAQVGNKNKQKFLH 241
Query: 244 ALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQK 303
ALSPTP +TMS A++S K P TTL PY D + SK KRP+DS SDSQYWRYDV K
Sbjct: 242 ALSPTPTSTMSPAELSAKPPKTTLWPYNLQDGAAESK---KRPNDSDSDSQYWRYDVP-K 297
Query: 304 RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPEC 363
RQK G G+K+CFKF+ SGSCPRGE C+F+H+ +AREQC RGVCLD IIKGKCEKGPEC
Sbjct: 298 RQK-SGSQGEKLCFKFVCSGSCPRGEDCHFQHNAEAREQCRRGVCLDLIIKGKCEKGPEC 356
Query: 364 SYKHSLQNDDS-QRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLV 422
SYKH Q++ S QR RSENA NRSKECWFCLSSPSVESHLIVSVGE +YCALPKG LV
Sbjct: 357 SYKHEFQDESSIQRKPRSENA--NRSKECWFCLSSPSVESHLIVSVGESFYCALPKGSLV 414
Query: 423 EDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQ 482
EDH+L+IP+EH+PNT+ SPE E EL R+QN L YK+QG +AVFFE +SKR +HANLQ
Sbjct: 415 EDHILIIPIEHLPNTLVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELVSKRVSHANLQ 474
Query: 483 AVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEG 542
VP+P+S+A + +IF+LAAEKLGFK + K + S+DGR+ L+ +++ FYVELP+G
Sbjct: 475 VVPVPSSRARLLPNIFSLAAEKLGFKLVTKKFNDSTDGRKYLQKEYNAALGLFYVELPDG 534
Query: 543 TVLSHLIEENERFPAQFGREV 563
TVLSH +EENE FPAQFGREV
Sbjct: 535 TVLSHTLEENEVFPAQFGREV 555
|
|
| ZFIN|ZDB-GENE-031204-5 cwf19l1 "CWF19-like 1, cell cycle control" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 413 (150.4 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 109/331 (32%), Positives = 170/331 (51%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV GR+N LF RV ++ K +G FD +LCVG FF S E E+ Y G +
Sbjct: 5 PLRVLACGDVEGRINALFNRVNAIQKKSGQFDLLLCVGDFFGSSPEAEAEWATYKSGAKK 64
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI T +G AAS+ + DG ++ +N+ L G FT GL +A
Sbjct: 65 APIHTCILG-----------AASQETVKYFPSSDGCELAENITCLGRRGIFTGASGLQIA 113
Query: 122 YLSGRQS-SEGQQFGTYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTN--KAAASD 175
Y+SGR++ E ++ D+ AL A L VD+ LT++WP GV + +D
Sbjct: 114 YVSGREAHQEPAPSHCFTPKDITALVAPLLSNSKFRGVDILLTSQWPRGVCQYGNSPETD 173
Query: 176 M-LVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLG 229
M G+S ++++L ++KPRYH AG +GV Y R PY N + HV+RF+
Sbjct: 174 MKFCGVS-------SIADLADKLKPRYHFAGLEGVHYERLPYRNHVVLQENTQHVSRFIA 226
Query: 230 LAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYT-FLDQGSHSKEAAKRPSD 288
LA V N K+K+++A + P M + ++ + + T +PY + G +++A
Sbjct: 227 LATVNNPAKKKYLYAFNIIPMKNMDSTELVKQPQDVTENPYRKLMKDGKKERQSASMTDA 286
Query: 289 SVSDSQYWRYDVSQK--RQKHGG---GDGDK 314
+ + +D+ QK +++HG DGD+
Sbjct: 287 QEEPASQFFFDLGQKNPQRQHGRKRQSDGDR 317
|
|
| MGI|MGI:1919752 Cwf19l1 "CWF19-like 1, cell cycle control (S. pombe)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 411 (149.7 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 107/313 (34%), Positives = 163/313 (52%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RV+++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDVLFNRVRTIQKKSGNFDLLLCVGNFFGSAQDA--EWEEYKTGNKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G A ++ +AN DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLG-----------ANNEETANYFQGADGCELAENITYLGRKGVFTGSSGLQIV 111
Query: 122 YLSGRQS-SEGQQFGTYSQDDVDALRAL---AEEPGIVDLFLTNEWPSGVTNKAAASDML 177
YLSG +S E ++S DV +LR + A + VD+ LT+ WP V + +S
Sbjct: 112 YLSGTESLDEPVPAHSFSPKDVSSLRTMLCSASQFKGVDILLTSPWPKYVGSFGNSS--- 168
Query: 178 VGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLA 231
G D+ N S +S L +KPRYH A + +Y R PY N A H TRF+ LA
Sbjct: 169 -GEVDTKNCGSALISSLAVSLKPRYHFAALEKSYYERLPYRNHVVLQESAQHATRFIALA 227
Query: 232 PVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVS 291
VGN EK+K+++A S P M+ A++ + P+ T +PY D G + P+
Sbjct: 228 NVGNPEKKKYLYAFSIVPMKLMAVAELVKQPPDVTENPYR--DSGKQAAGGKHIPAPQEE 285
Query: 292 DSQYWRYDVSQKR 304
+ + +D+S+K+
Sbjct: 286 SACQFFFDLSEKQ 298
|
|
| UNIPROTKB|F1S8V2 CWF19L1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 401 (146.2 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 107/321 (33%), Positives = 164/321 (51%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RV+++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDILFNRVRAIQKKSGNFDLLLCVGNFFGSTPDT--EWEEYKTGVKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G A ++ + +DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLG-----------ANNQETVKYFQDVDGCELAENITYLGRKGIFTGSSGLQIV 111
Query: 122 YLSGRQSSEGQQFG-TYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTNKAAASDML 177
YLSG +S G ++S DV +LR L P VD+ LT+ WP V N +S
Sbjct: 112 YLSGTESLNEPVPGYSFSPKDVSSLRMMLCSTPQFKGVDILLTSPWPKYVGNFGNSS--- 168
Query: 178 VGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLA 231
G D+ S +S L A +KPRYH A + +Y R PY N +A H TRF+ LA
Sbjct: 169 -GEVDTKKCGSALISSLAAGLKPRYHFAALEKTYYERLPYRNHIVLQENAQHATRFIALA 227
Query: 232 PVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVS 291
VGN EK+K+++A S P M AA++ + P+ T +PY G + + P+
Sbjct: 228 NVGNPEKKKYLYAFSIVPMKLMDAAELVKQPPDVTENPYR--KSGKEASIGKQIPAPEEE 285
Query: 292 DSQYWRYDVSQKRQKHGGGDG 312
+ + +D+++K+ + G
Sbjct: 286 SACQFFFDLNEKQGRKRSSTG 306
|
|
| UNIPROTKB|E1BG07 CWF19L1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 404 (147.3 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 106/321 (33%), Positives = 163/321 (50%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RV+++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDALFNRVRAIQKKSGNFDLLLCVGNFFGSTPDA--EWEEYKTGVKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G A ++ + +DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLG-----------ANNQETVKYFQDVDGCELAENITYLGRKGVFTGSSGLQIV 111
Query: 122 YLSGRQSSEGQQFG-TYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTNKAAASDML 177
YLSG +S G ++S DV +LR L P VD+ LT+ WP V N +S
Sbjct: 112 YLSGTESLNEPVPGYSFSPKDVSSLRTMLCSTPQFKGVDILLTSPWPKYVGNFGNSS--- 168
Query: 178 VGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLA 231
G D+ S +S L +KPRYH A + +Y R PY N +A H TRF+ LA
Sbjct: 169 -GEVDTKKCGSALISSLATGLKPRYHFASLEKTYYERLPYRNHIVLQENAQHATRFIALA 227
Query: 232 PVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVS 291
VGN EK+K+++A S P M AA++ + P+ T +PY G + + P+
Sbjct: 228 NVGNPEKKKYLYAFSIVPMKLMDAAELVKQPPDVTENPYR--KSGKEASTGKQTPAPEEE 285
Query: 292 DSQYWRYDVSQKRQKHGGGDG 312
+ + +D+++K+ + G
Sbjct: 286 SACQFFFDLNEKQGRKRSSTG 306
|
|
| RGD|1304716 Cwf19l1 "CWF19-like 1, cell cycle control (S. pombe)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 400 (145.9 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 106/321 (33%), Positives = 163/321 (50%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RV+++ K +G FD +LCVG FF + + E Y G +
Sbjct: 5 PLRLLACGDVEGKFDVLFNRVRTIQKKSGNFDLLLCVGNFFGSTQDAAWE--EYRTGSKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G A ++ +AN DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLG-----------ANNQETANYFQDADGCELAENITYLGRKGVFTGSSGLQIV 111
Query: 122 YLSGRQS-SEGQQFGTYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTNKAAASDML 177
YLSG +S E ++S DV +LR L P VD+ LT+ WP V + +S
Sbjct: 112 YLSGTESLDEPVPAYSFSPKDVSSLRTMLCSAPQFKGVDILLTSPWPKYVGSFGNSS--- 168
Query: 178 VGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLA 231
G D+ S +S L +KPRYH A + +Y R PY N A H TRF+ LA
Sbjct: 169 -GEVDTKQCGSALISSLAVSLKPRYHFAALEKSYYERLPYRNHVVLQESAQHATRFIALA 227
Query: 232 PVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVS 291
VGN EK+K+++A S P M+ A++ + P+ T +PY + G + + P+
Sbjct: 228 NVGNPEKKKYLYAFSIVPMKLMAVAELVKQPPDVTENPYR--ESGKQAAAGKQIPAPQEE 285
Query: 292 DSQYWRYDVSQKRQKHGGGDG 312
+ + +D+++K+ + G
Sbjct: 286 SACQFFFDLNEKQGRKRSSTG 306
|
|
| UNIPROTKB|Q69YN2 CWF19L1 "CWF19-like protein 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 395 (144.1 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
Identities = 110/322 (34%), Positives = 164/322 (50%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RVQ++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDILFNRVQAIQKKSGNFDLLLCVGNFFGSTQDA--EWEEYKTGIKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G K A DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLGANNQETVKYFQDA-----------DGCELAENITYLGRKGIFTGSSGLQIV 111
Query: 122 YLSGRQSSEGQQFG-TYSQDDVDALRAL----AEEPGIVDLFLTNEWPSGVTNKAAASDM 176
YLSG +S G ++S DV +LR + ++ G VD+ LT+ WP V N +S
Sbjct: 112 YLSGTESLNEPVPGYSFSPKDVSSLRMMLCTTSQFKG-VDILLTSPWPKCVGNFGNSS-- 168
Query: 177 LVGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGL 230
G D+ S VS L +KPRYH A + +Y R PY N +A H TRF+ L
Sbjct: 169 --GEVDTKKCGSALVSSLATGLKPRYHFAALEKTYYERLPYRNHIILQENAQHATRFIAL 226
Query: 231 APVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSV 290
A VGN EK+K+++A S P M AA++ + P+ T +PY Q + + P +
Sbjct: 227 ANVGNPEKKKYLYAFSIVPMKLMDAAELVKQPPDVTENPYRKSGQEASIGKQILAPVEE- 285
Query: 291 SDSQYWRYDVSQKRQKHGGGDG 312
S Q++ +D+++K+ + G
Sbjct: 286 SACQFF-FDLNEKQGRKRSSTG 306
|
|
| UNIPROTKB|E2RJE9 CWF19L1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 393 (143.4 bits), Expect = 3.3e-66, Sum P(2) = 3.3e-66
Identities = 107/322 (33%), Positives = 164/322 (50%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RV+++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDVLFNRVRAIQKKSGNFDLLLCVGNFFGSTPDA--EWEKYKTGIKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G K A DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLGANNQETVKYFQDA-----------DGCELAENITYLGRKGIFTGSSGLQIV 111
Query: 122 YLSGRQSSEGQQFG-TYSQDDVDALRAL----AEEPGIVDLFLTNEWPSGVTNKAAASDM 176
YLSG +S G ++S DV +LR + ++ G VD+ LT+ WP V N +S
Sbjct: 112 YLSGTESLNEPVPGYSFSPKDVSSLRTMLCSTSQFKG-VDILLTSPWPKYVGNFGNSS-- 168
Query: 177 LVGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGL 230
G D+ S VS L ++KPRYH A + +Y R PY N +A H TRF+ L
Sbjct: 169 --GEVDTKKCGSALVSSLATDLKPRYHFAALEKTYYERLPYRNHIVLQENAQHATRFIAL 226
Query: 231 APVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSV 290
A VGN EK+K+++A S P M A++ + P+ T +PY + + + P +
Sbjct: 227 ANVGNPEKKKYLYAFSIVPMKLMETAELVKQPPDVTENPYRKSGKEASMGKQISAPEEE- 285
Query: 291 SDSQYWRYDVSQKRQKHGGGDG 312
S Q++ +D+++K+ + G
Sbjct: 286 SACQFF-FDLNEKQGRKRSSTG 306
|
|
| UNIPROTKB|F1NLI3 F1NLI3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 394 (143.8 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 106/318 (33%), Positives = 165/318 (51%)
Query: 7 LLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIP 66
L CGDV GRL LF RV+++ +G FD +LCVG FF +S+ E+ Y G + PIP
Sbjct: 1 LACGDVEGRLETLFGRVRAIQSKSGRFDMLLCVGNFFSSTSDA--EWAEYRSGAKKAPIP 58
Query: 67 TYFIGDYGVGAAKVLLAASKNSANQGFK-MDGFKVTDNLFWLKGSGNFT-LHGLSVAYLS 124
T+ +G A+ F + G ++ +N+ +L G F+ GL +AYLS
Sbjct: 59 TFVLG------------ANNQETMHCFPHVTGCELAENITYLGRRGLFSGSSGLQIAYLS 106
Query: 125 GRQSS-EGQQFGTYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTNKAAASDMLVGI 180
G +S E ++S DV L++ L P VD+ LT+ WP GV + A + G
Sbjct: 107 GTESQDEPTPAYSFSSKDVTELKSSLLSTPDFKGVDILLTSPWPRGVESFANSP----GE 162
Query: 181 SDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSNVDAV-----HVTRFLGLAPVG 234
D+ ST +S+L A +KPRYH A + +Y R PY N + HVTRF+ LA VG
Sbjct: 163 IDTKKCGSTLISDLAASLKPRYHFAALEKAYYERLPYRNHTVLQETPQHVTRFIALAEVG 222
Query: 235 NKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQ 294
N K+K+++A S P + M A++ + + T +PY L +G+ + + + Q
Sbjct: 223 NTSKKKYLYAFSIVPMSLMDPAELVKQPQDVTENPYRKLRKGTQKTKVLVSNQEETA-CQ 281
Query: 295 YWRYDVSQKRQKHGGGDG 312
++ +D+++ + K DG
Sbjct: 282 FF-FDLNKHQGKKRPSDG 298
|
|
| UNIPROTKB|E1C959 E1C959 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 397 (144.8 bits), Expect = 2.4e-63, Sum P(2) = 2.4e-63
Identities = 103/287 (35%), Positives = 153/287 (53%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV GRL LF RV+++ +G FD +LCVG FF +S+ E+ Y G +
Sbjct: 5 PLRVLACGDVEGRLETLFGRVRAIQSKSGRFDMLLCVGNFFSSTSDA--EWAEYRSGAKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFK-MDGFKVTDNLFWLKGSGNFT-LHGLSV 120
PIPT+ +G A+ F + G ++ +N+ +L G F+ GL +
Sbjct: 63 APIPTFVLG------------ANNQETMHCFPHVTGCELAENITYLGRRGLFSGSSGLQI 110
Query: 121 AYLSGRQSS-EGQQFGTYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTNKAAASDM 176
AYLSG +S E ++S DV L++ L P VD+ LT+ WP GV + A +
Sbjct: 111 AYLSGTESQDEPTPAYSFSSKDVTELKSSLLSTPDFKGVDILLTSPWPRGVESFANSP-- 168
Query: 177 LVGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSNVDAV-----HVTRFLGL 230
G D+ ST +S+L A +KPRYH A + +Y R PY N + HVTRF+ L
Sbjct: 169 --GEIDTKKCGSTLISDLAASLKPRYHFAALEKAYYERLPYRNHTVLQETPQHVTRFIAL 226
Query: 231 APVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGS 277
A VGN K+K+++A S P + M A++ + + T +PY L +G+
Sbjct: 227 AEVGNTSKKKYLYAFSIVPMSLMDPAELVKQPQDVTENPYRKLRKGT 273
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q69NK8 | C3H59_ORYSJ | No assigned EC number | 0.5929 | 0.9735 | 0.9004 | yes | no |
| Q5RGJ5 | C19L1_DANRE | No assigned EC number | 0.3067 | 0.8447 | 0.8805 | yes | no |
| Q84WU9 | C3H64_ARATH | No assigned EC number | 0.7165 | 0.9735 | 0.9261 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 567 | |||
| pfam04677 | 122 | pfam04677, CwfJ_C_1, Protein similar to CwfJ C-ter | 4e-42 | |
| cd07380 | 150 | cd07380, MPP_CWF19_N, Schizosaccharomyces pombe CW | 2e-24 | |
| cd07380 | 150 | cd07380, MPP_CWF19_N, Schizosaccharomyces pombe CW | 9e-24 | |
| pfam04676 | 97 | pfam04676, CwfJ_C_2, Protein similar to CwfJ C-ter | 9e-09 | |
| cd00844 | 262 | cd00844, MPP_Dbr1_N, Dbr1 RNA lariat debranching e | 6e-05 |
| >gnl|CDD|218208 pfam04677, CwfJ_C_1, Protein similar to CwfJ C-terminus 1 | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 4e-42
Identities = 53/115 (46%), Positives = 75/115 (65%)
Query: 384 SANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPE 443
CWFCLS+P++E HLIVS+G Y ALPKGPLV H L+IP++H+P+T+S E
Sbjct: 7 IKILPDSCWFCLSNPNLEKHLIVSIGNKAYLALPKGPLVSGHCLIIPIQHIPSTLSLDEE 66
Query: 444 CEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQAVPIPTSKAAAVQDIF 498
E+ F+ +L + YK+QGK+AVFFE S+R H ++Q +P+P S + F
Sbjct: 67 VWDEIRNFRKALTLMYKSQGKDAVFFEIASQRRPHLHIQCIPVPKSISKLAPLYF 121
|
This region is found in the N terminus of Schizosaccharomyces pombe protein CwfJ. CwfJ is part of the Cdc5p complex involved in mRNA splicing. Length = 122 |
| >gnl|CDD|163623 cd07380, MPP_CWF19_N, Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 98.9 bits (247), Expect = 2e-24
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 7 LLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIP 66
L+CGDV GRL LF++V ++NK GPFDA+LCVG FF D + +E Y +G ++PIP
Sbjct: 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDED-DEELEAYKDGSKKVPIP 59
Query: 67 TYFIGDYGVGA 77
TYF+G G
Sbjct: 60 TYFLGGNNPGV 70
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 150 |
| >gnl|CDD|163623 cd07380, MPP_CWF19_N, Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 97.0 bits (242), Expect = 9e-24
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
Query: 155 VDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYARE 214
VD+ LT+EWP G++ S + + ++EL ++KPRYH AG +GVFY RE
Sbjct: 70 VDILLTSEWPKGISKL---SKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE 126
Query: 215 PYSNVDAV-----HVTRFLGLAPV 233
PY N + HVTRF+GLAPV
Sbjct: 127 PYRNDSVLEEKAEHVTRFIGLAPV 150
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 150 |
| >gnl|CDD|218207 pfam04676, CwfJ_C_2, Protein similar to CwfJ C-terminus 2 | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 9e-09
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 514 SSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREV 563
+K RR + +F+VE P L+H+IE+ ERFP QFGREV
Sbjct: 12 DTKGKGLRRVIPKGLP----YFHVEFPLDGGLAHVIEDEERFPLQFGREV 57
|
This region is found in the N terminus of Schizosaccharomyces pombe protein CwfJ. CwfJ is part of the Cdc5p complex involved in mRNA splicing. Length = 97 |
| >gnl|CDD|163619 cd00844, MPP_Dbr1_N, Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 6e-05
Identities = 62/261 (23%), Positives = 102/261 (39%), Gaps = 61/261 (23%)
Query: 14 GRLNQLFKRVQSVNKSAG-PFDAVLCVGQF-------------FPDSSELLDEFMNYVEG 59
G L+++++ ++ + K G D ++C G F P + +F Y G
Sbjct: 9 GELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSG 68
Query: 60 RSEIPIPTYFIGDYGVG---AAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLH 116
+ PI T FIG G A+ L G+ V N+++L +G
Sbjct: 69 EKKAPILTIFIG----GNHEASNYL---------WELPYGGW-VAPNIYYLGYAGVVNFG 114
Query: 117 GLSVAYLSGRQSSEGQQFG-----TYSQD-----------DVDALRALAEEPGIVDLFLT 160
GL +A LSG S + G YS+D +V L+ L + +D+FL+
Sbjct: 115 GLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLKQLKQP---IDIFLS 171
Query: 161 NEWPSGVTNKAAASDML---VGISDSSNTDSTVS----ELVAEIKPRYHIAGSKGVFYA- 212
++WP G+ +L + + S EL+ +KPRY + V +A
Sbjct: 172 HDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFAA 231
Query: 213 ---REPYSNVDAVHVTRFLGL 230
E S + T+FL L
Sbjct: 232 LVPHENKSPGNTNKETKFLAL 252
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 567 | |||
| KOG2476 | 528 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 100.0 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 100.0 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 100.0 | |
| KOG2477 | 628 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| PF04677 | 121 | CwfJ_C_1: Protein similar to CwfJ C-terminus 1; In | 100.0 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.87 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.87 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.83 | |
| PRK10687 | 119 | purine nucleoside phosphoramidase; Provisional | 99.64 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.6 | |
| COG0537 | 138 | Hit Diadenosine tetraphosphate (Ap4A) hydrolase an | 99.58 | |
| cd01275 | 126 | FHIT FHIT (fragile histidine family): FHIT protein | 99.54 | |
| cd01277 | 103 | HINT_subgroup HINT (histidine triad nucleotide-bin | 99.53 | |
| cd01276 | 104 | PKCI_related Protein Kinase C Interacting protein | 99.47 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.43 | |
| PF01230 | 98 | HIT: HIT domain; InterPro: IPR001310 The Histidine | 99.38 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.37 | |
| PF04676 | 98 | CwfJ_C_2: Protein similar to CwfJ C-terminus 2; In | 99.31 | |
| cd01278 | 104 | aprataxin_related aprataxin related: Aprataxin, a | 99.29 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.25 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.25 | |
| cd00468 | 86 | HIT_like HIT family: HIT (Histidine triad) protein | 99.24 | |
| KOG3275 | 127 | consensus Zinc-binding protein of the histidine tr | 99.24 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.14 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.04 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.01 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 99.0 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.97 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.97 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 98.96 | |
| TIGR00209 | 347 | galT_1 galactose-1-phosphate uridylyltransferase, | 98.96 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 98.95 | |
| PRK11720 | 346 | galactose-1-phosphate uridylyltransferase; Provisi | 98.94 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.81 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 98.8 | |
| PLN02643 | 336 | ADP-glucose phosphorylase | 98.78 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 98.75 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 98.75 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.74 | |
| PHA03008 | 234 | hypothetical protein; Provisional | 98.74 | |
| cd00608 | 329 | GalT Galactose-1-phosphate uridyl transferase (Gal | 98.74 | |
| PF11969 | 116 | DcpS_C: Scavenger mRNA decapping enzyme C-term bin | 98.73 | |
| KOG3379 | 150 | consensus Diadenosine polyphosphate hydrolase and | 98.73 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 98.56 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.53 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.53 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 98.5 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 98.48 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 98.48 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 98.48 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 98.37 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.35 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 98.34 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 98.25 | |
| PHA02239 | 235 | putative protein phosphatase | 98.19 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.16 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 98.15 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 98.1 | |
| PLN02533 | 427 | probable purple acid phosphatase | 98.1 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 98.09 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 98.09 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 98.08 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.06 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 97.99 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 97.98 | |
| KOG4359 | 166 | consensus Protein kinase C inhibitor-like protein | 97.92 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.85 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 97.83 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.82 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 97.68 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 97.65 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 97.64 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 97.59 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 97.58 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 97.57 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 97.56 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.52 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 97.52 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 97.51 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 97.42 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 97.4 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 97.38 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 97.33 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 97.31 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 97.31 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 97.29 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 97.23 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 97.16 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.05 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 97.0 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 96.95 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 96.93 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 96.78 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 96.77 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 96.74 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 96.64 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 96.56 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 96.37 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 96.36 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 96.35 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 96.31 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 96.28 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 96.26 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 96.24 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 96.22 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 96.18 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 96.16 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 96.15 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 96.14 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 96.03 | |
| COG1085 | 338 | GalT Galactose-1-phosphate uridylyltransferase [En | 95.81 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 95.77 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 95.76 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 95.75 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 95.67 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 95.55 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 95.48 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 95.31 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 95.15 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 95.03 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 94.99 | |
| PF02744 | 166 | GalP_UDP_tr_C: Galactose-1-phosphate uridyl transf | 94.64 | |
| KOG0371 | 319 | consensus Serine/threonine protein phosphatase 2A, | 94.64 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 94.57 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 93.83 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 93.38 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 93.18 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 92.8 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 92.19 | |
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 92.09 | |
| KOG2958 | 354 | consensus Galactose-1-phosphate uridylyltransferas | 91.55 | |
| KOG0373 | 306 | consensus Serine/threonine specific protein phosph | 91.33 | |
| KOG0372 | 303 | consensus Serine/threonine specific protein phosph | 91.25 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 90.53 | |
| KOG1595 | 528 | consensus CCCH-type Zn-finger protein [General fun | 89.94 | |
| cd00608 | 329 | GalT Galactose-1-phosphate uridyl transferase (Gal | 89.81 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 89.4 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 89.33 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 88.93 | |
| COG4360 | 298 | APA2 ATP adenylyltransferase (5',5'''-P-1,P-4-tetr | 88.41 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 88.4 | |
| KOG0374 | 331 | consensus Serine/threonine specific protein phosph | 88.1 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 87.88 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 87.83 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 86.79 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 85.85 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 85.71 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 85.46 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 81.99 | |
| PLN03103 | 403 | GDP-L-galactose-hexose-1-phosphate guanyltransfera | 81.27 | |
| PF05011 | 145 | DBR1: Lariat debranching enzyme, C-terminal domain | 80.06 |
| >KOG2476 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-113 Score=875.59 Aligned_cols=479 Identities=44% Similarity=0.763 Sum_probs=405.1
Q ss_pred CCC--CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChH
Q 008383 1 MSP--PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAA 78 (567)
Q Consensus 1 M~~--~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~ 78 (567)
|+. .|||||||+.|++++||+||+++++|+||||++||+|+||+. .....+|.+|.+|..++|+||||.++|...+.
T Consensus 1 Ma~~~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~-~~~~~e~~~ykng~~~vPiptY~~g~~~~~~~ 79 (528)
T KOG2476|consen 1 MAQADAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGH-DTQNAEVEKYKNGTKKVPIPTYFLGDNANETE 79 (528)
T ss_pred CCCCCceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCC-ccchhHHHHHhcCCccCceeEEEecCCCCccc
Confidence 773 599999999999999999999999999999999999999997 34467899999999999999999999986555
Q ss_pred HHHHHHhccccccCcccCCceecccEEEeCCCCeEEE-cCeEEEEEecccCCCCCCCCCCCHHHHHHHHH---hhcCCCC
Q 008383 79 KVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL-HGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA---LAEEPGI 154 (567)
Q Consensus 79 ~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~-~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~---~~~~~~~ 154 (567)
.++.. .+|.|||+||+|||++|++++ +|++||||||.++..... ..|+.+|+++|+. ......+
T Consensus 80 ky~~n-----------~~g~Ei~~Nlt~Lg~~G~~~l~sGl~IaYLsG~e~~~~~~-~~fs~~dv~~l~~~~~~~~~~~g 147 (528)
T KOG2476|consen 80 KYFEN-----------SDGKEIAENLTYLGRKGTYKLASGLTIAYLSGPESSEKGE-SKFSQADVDELRHRLDTQKEFKG 147 (528)
T ss_pred eeccc-----------CCCcccccceeeecccceEeecCCcEEEEeeccccccccc-cccCHHHHHHHhcccccccccCC
Confidence 54442 358899999999999999985 699999999998765542 3799999999883 3345689
Q ss_pred ccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCC-----CCcceeEEEE
Q 008383 155 VDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNV-----DAVHVTRFLG 229 (567)
Q Consensus 155 vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~-----~~~~~TRFI~ 229 (567)
||||||++||.+|... ... .+ ......||..|++|+.++||||||+|..++||||+||+|+ ++.++||||+
T Consensus 148 vDILlTseWP~~v~e~-~ss-~~--~~~~~~gs~lvs~La~~lkPRYHFa~~~~v~YErePyrn~~~~~~~~~h~TRFI~ 223 (528)
T KOG2476|consen 148 VDILLTSEWPADVQER-NSS-LP--ESKRLCGSELVSELAAELKPRYHFAGSDGVFYEREPYRNHAALNEEAGHVTRFIA 223 (528)
T ss_pred ccEEEecCCcchhhhc-ccc-Cc--cccCCcchHHHHHHHHhcCcceEeccCCCceeecccccchhhhcccccceeeeee
Confidence 9999999999999874 111 11 1124689999999999999999999998899999999995 4789999999
Q ss_pred ccCCCCcccceeEEEeccCCCCCCccccccCCCCCCcCCCCccccCCCCcccccCCCCCCCCCCcccccccccccccCCC
Q 008383 230 LAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQKRQKHGG 309 (567)
Q Consensus 230 L~~~g~~~K~Kw~yAf~i~p~~~~~~~~l~~~p~~~t~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (567)
||++||++|+||+|||++.|+.+|++.+|++.|+|+|+|||.... .. -...+|..++ ++.+++||+++++.+
T Consensus 224 LA~vGN~ek~K~lYAfs~~P~~~~~~~el~a~Ppn~~~~Py~~~d--~~-~qs~kr~~~s--~~~q~ffd~~~~~~~--- 295 (528)
T KOG2476|consen 224 LAKVGNPEKQKWLYAFSLKPMGTMELAELTAKPPNLIPNPYNLED--VA-IQSNKRPNSS--ESTQYFFDMDKQQLS--- 295 (528)
T ss_pred hhhcCCccccceeeeecccccccchhhhcccCCCccCCCCcchhh--hh-hhhccCCCCC--ccceeeeccCccccc---
Confidence 999999999999999999999999999999999999999996211 01 1234554433 244455998633222
Q ss_pred CCCCCcceeeeccCCCCCCCcccccCCchhhhhhccccchhhhccccCCCCCCcccccccCCCccccccCCcccccCCCC
Q 008383 310 GDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSK 389 (567)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (567)
+.+||+...++.. +++|. +.+.++
T Consensus 296 -----------------------------------------------~~~gr~~h~~~~~-----kgpR~----p~~~pg 319 (528)
T KOG2476|consen 296 -----------------------------------------------KMNGRESHSDKSE-----KGPRK----PKIPPG 319 (528)
T ss_pred -----------------------------------------------cCCcccccccccc-----cCCCC----CCCCCC
Confidence 1122222222100 11111 335688
Q ss_pred CCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCceEEE
Q 008383 390 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFF 469 (567)
Q Consensus 390 ~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~g~~~v~~ 469 (567)
.||||+|||++++||||+||+++|++||||||++||||||||+|++++..+++|+++||.+|+.+|++||+++|+.+|||
T Consensus 320 ~CwFCLSnP~vEkHLIVsIG~~~YlAlaKGpLs~~HvlIipi~H~p~~~~ls~ev~~Ei~kykaal~~myk~~g~~~vvf 399 (528)
T KOG2476|consen 320 SCWFCLSNPNVEKHLIVSIGNHFYLALAKGPLSSDHVLIIPIEHIPSLVPLSAEVTQEINKYKAALRKMYKKQGKDAVVF 399 (528)
T ss_pred ceEEEecCCChhhheEEEecceeEEeecCCCCCCCeEEEEEcccccccccCCHHHHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCeeEEEEeecCcchhhHHHHHHHHHHHHcCCcceeccCCCCcchhhhHhhhcCCCCCeEEEEecCCceEEEEe
Q 008383 470 EWLSKRGTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLI 549 (567)
Q Consensus 470 E~~~~~~~H~hi~~vPvp~~~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~Yf~v~~~~~~~~~~~i 549 (567)
|+.+.++.|+|+|+||||+.....++..|..+|++++++|++.+... .+.+..+.+.+||+||+|+|+.|+|++
T Consensus 400 E~~~~rs~Hlq~Qvipvpks~s~~ik~~F~~~A~eag~ef~t~~~~~------s~~~~~n~~l~yF~vELPdg~~L~hr~ 473 (528)
T KOG2476|consen 400 ERQSYRSVHLQLQVIPVPKSSSRQIKSSFETAAEEAGLEFETYDSHS------SIKNQSNNGLPYFVVELPDGSILIHRL 473 (528)
T ss_pred EeecccceeeEEEEEeccchhhhhhhHHHHHHHHHcCceEEecCcch------hhhhhhccCCceEEEECCCCCeehhhh
Confidence 96689999999999999999999999999999999999999776533 466677778899999999999999999
Q ss_pred cCCCccccccccccccc
Q 008383 550 EENERFPAQFGREVRYA 566 (567)
Q Consensus 550 ~~~~~f~~qFgR~Vla~ 566 (567)
+.+++||+||||||||+
T Consensus 474 ~k~e~FplqFGReVlAs 490 (528)
T KOG2476|consen 474 MKNETFPLQFGREVLAS 490 (528)
T ss_pred hccCccchhhhHHHHHH
Confidence 99999999999999996
|
|
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-45 Score=366.61 Aligned_cols=223 Identities=26% Similarity=0.446 Sum_probs=179.7
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHhhcC-CCcEEEEecCCCCCCh-------------hhHHHHHHHhcccCCCCccEEEEc
Q 008383 6 ILLCGDVLGRLNQLFKRVQSVNKSAG-PFDAVLCVGQFFPDSS-------------ELLDEFMNYVEGRSEIPIPTYFIG 71 (567)
Q Consensus 6 ILv~GDvhG~~~~l~~kv~~l~~k~G-pfD~vi~~GDff~~~~-------------~~~~~~~~~l~g~~~~p~ptyfv~ 71 (567)
|.|+||+||+|+.++++++.++++++ ++|+|||||||+.... ..+.+|.+|++|..++|+|||||+
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 68999999999999999999998865 8999999999976521 124578899999999999999999
Q ss_pred cCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCC-----CCCCCCHHHHHHHH
Q 008383 72 DYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQ-----QFGTYSQDDVDALR 146 (567)
Q Consensus 72 GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~-----~~~~~t~~dv~~L~ 146 (567)
||||+. .++..+. .|+++++||+||++++|++++|+|||||||++..... ....|+++++.++.
T Consensus 81 GNHE~~-~~l~~l~----------~gg~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~rs~y 149 (262)
T cd00844 81 GNHEAS-NYLWELP----------YGGWVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAY 149 (262)
T ss_pred CCCCCH-HHHHhhc----------CCCeecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHHHHhh
Confidence 999975 4555553 4679999999999999999999999999999764321 13478888887643
Q ss_pred H--------hhcCCCCccEEEeCCCCcccccccccc-------ccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcc
Q 008383 147 A--------LAEEPGIVDLFLTNEWPSGVTNKAAAS-------DMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 211 (567)
Q Consensus 147 ~--------~~~~~~~vDILLTh~wP~gI~~~~~~~-------~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fy 211 (567)
. +.....+|||||||+||.||.+.++.. .+..++...+.||+.+++|++++|||||||||.|.+|
T Consensus 150 ~~r~~~~~kl~~~~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f 229 (262)
T cd00844 150 HVRNIEVFKLKQLKQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKF 229 (262)
T ss_pred hhhHHHHHHHHhcCCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCccc
Confidence 2 222245899999999999998877642 1222333347899999999999999999999999988
Q ss_pred c-cccccCC---CCcceeEEEEccCCCCccccee
Q 008383 212 A-REPYSNV---DAVHVTRFLGLAPVGNKEKQKF 241 (567)
Q Consensus 212 E-r~Py~~~---~~~~~TRFI~L~~~g~~~K~Kw 241 (567)
| ++||+|. +..++|||||||++-+ +++|
T Consensus 230 ~~~~~~~~~~~~~~~~~TRFiaL~k~~~--~~~~ 261 (262)
T cd00844 230 AALVPHENKSPGNTNKETKFLALDKCLP--GRDF 261 (262)
T ss_pred ceecCCcccccCCCCcceEEEEcccccC--CCCC
Confidence 8 5599983 3578999999999977 4444
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=312.25 Aligned_cols=145 Identities=50% Similarity=0.933 Sum_probs=127.8
Q ss_pred EEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHHHhc
Q 008383 7 LLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASK 86 (567)
Q Consensus 7 Lv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~l~~ 86 (567)
||+||+||+++++|++++++++|+||||++|||||||+...+ .++|.+|++|.+++|+||||++|||+
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~-~~~~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDED-DEELEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccc-hhhHHHHhcCCccCCCCEEEECCCCC-----------
Confidence 799999999999999999999999999999999999998655 36899999999999999999999751
Q ss_pred cccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCCCcc
Q 008383 87 NSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSG 166 (567)
Q Consensus 87 ~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh~wP~g 166 (567)
++||||||+||+|
T Consensus 69 -------------------------------------------------------------------~~DILlTh~wP~g 81 (150)
T cd07380 69 -------------------------------------------------------------------GVDILLTSEWPKG 81 (150)
T ss_pred -------------------------------------------------------------------CCCEEECCCCchh
Confidence 4899999999999
Q ss_pred ccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCC-----CcceeEEEEccCC
Q 008383 167 VTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVD-----AVHVTRFLGLAPV 233 (567)
Q Consensus 167 I~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~-----~~~~TRFI~L~~~ 233 (567)
|.+.++... .....+.||+.|++|++++|||||||||.+.||||+||+|+. ..++||||+||++
T Consensus 82 i~~~~~~~~---~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~Pf~~~~~~~~~~~~~TRFi~La~~ 150 (150)
T cd07380 82 ISKLSKVPF---EETLLICGSDLIAELAKKLKPRYHFAGLEGVFYEREPYRNDSVLEEKAEHVTRFIGLAPV 150 (150)
T ss_pred hhhhCCCcc---cccccCCCCHHHHHHHHHcCCCeEeecCCCceEeecCccCCCccccccCcceeEEeccCC
Confidence 976554311 111247899999999999999999999999999999999985 3789999999985
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-41 Score=337.39 Aligned_cols=227 Identities=25% Similarity=0.437 Sum_probs=184.6
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhh-cCCCcEEEEecCCCCC-------------ChhhHHHHHHHhcccCCCCccEEE
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKS-AGPFDAVLCVGQFFPD-------------SSELLDEFMNYVEGRSEIPIPTYF 69 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k-~GpfD~vi~~GDff~~-------------~~~~~~~~~~~l~g~~~~p~ptyf 69 (567)
|||.|-|++||.++.+++.+..++++ ++|+|++||||||++. .+..+.+|..|++|+.++|+||+|
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 79999999999999999999999887 4599999999999774 245688999999999999999999
Q ss_pred EccCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCC-----CCCCCC------
Q 008383 70 IGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQ-----QFGTYS------ 138 (567)
Q Consensus 70 v~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~-----~~~~~t------ 138 (567)
|+||||. ..++.+|+ .|||+++||+|||.+||++++|+||||+||++..... .+..|+
T Consensus 81 IGGNHEA-snyL~eLp----------yGGwVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~stiRs 149 (456)
T KOG2863|consen 81 IGGNHEA-SNYLQELP----------YGGWVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNSTIRS 149 (456)
T ss_pred ecCchHH-HHHHHhcc----------cCceeccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccchhhhh
Confidence 9999996 46777776 4789999999999999999999999999999764221 133333
Q ss_pred -----HHHHHHHHHhhcCCCCccEEEeCCCCcccccccccc-------ccccccCCCCCCcHHHHHHHHHhCCCEEEEcc
Q 008383 139 -----QDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAAS-------DMLVGISDSSNTDSTVSELVAEIKPRYHIAGS 206 (567)
Q Consensus 139 -----~~dv~~L~~~~~~~~~vDILLTh~wP~gI~~~~~~~-------~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh 206 (567)
..|+..|+++ ..+|||+|||+||.||..+++.. .+.++++....||+++.+|++++||+|||++|
T Consensus 150 iYHvR~~dV~~Lkql---k~piDIfLSHDWP~GI~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~LkP~yWfsAH 226 (456)
T KOG2863|consen 150 IYHVRISDVAKLKQL---KHPIDIFLSHDWPRGIYYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLKPQYWFSAH 226 (456)
T ss_pred hhhhhhhhhHHHHhh---cCcceEEeecCCCcchhhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhCcchhhhhh
Confidence 4445555555 58999999999999999887653 24556666789999999999999999999999
Q ss_pred CCCccccccccCCCCcceeEEEEccCCCCcccceeEEEecc
Q 008383 207 KGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSP 247 (567)
Q Consensus 207 ~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~~K~Kw~yAf~i 247 (567)
.|+-|...-- +..+.++|.|++|+++-.. ++++.-+++
T Consensus 227 LH~KFaA~v~-H~~~~~~tkflaldKclp~--~~flqile~ 264 (456)
T KOG2863|consen 227 LHVKFAALVQ-HNKRSHVTKFLALDKCLPN--RNFLQILEI 264 (456)
T ss_pred HhhHHhhhhc-ccCcCCCcccccccccCCC--cchhhhccC
Confidence 9877665422 2237899999999999763 335444443
|
|
| >KOG2477 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=339.09 Aligned_cols=180 Identities=24% Similarity=0.470 Sum_probs=164.7
Q ss_pred CCCCCccccCCCCCCcceEEEECCEEEEEecC-CCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCc
Q 008383 387 RSKECWFCLSSPSVESHLIVSVGEYYYCALPK-GPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKE 465 (567)
Q Consensus 387 ~~~~C~FC~~~~~~~~hliis~g~~~yl~l~k-gpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~g~~ 465 (567)
..++|.||+.++..++|+|||+|..+||+||. -+|..|||+|||.+|.++..+||+++|+||++|+++|..||++.+.+
T Consensus 405 ~lD~C~rCfds~klpkhlviSlg~~tYLsLp~~~gL~~gHciIvptqH~~~t~slDEdvWDEIrnfrKcL~~Mfas~n~d 484 (628)
T KOG2477|consen 405 VLDTCPRCFDSEKLPKHLVISLGHRTYLSLPTQPGLAKGHCIIVPTQHRINTLSLDEDVWDEIRNFRKCLALMFASMNLD 484 (628)
T ss_pred HhhhchhhhcccccccceeEEeccceeEeccccCccccCceEEecccccccccccchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999997 55999999999999999999999999999999999999999999999
Q ss_pred eEEEEec-C-CCCCeeEEEEeecCcchhhHHHHHHHHHHHHcCCcceeccC-CCCcchhhhHhhhcCCCCCeEEEEecCC
Q 008383 466 AVFFEWL-S-KRGTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKS-SKSSDGRRSLRAQFDRNCSFFYVELPEG 542 (567)
Q Consensus 466 ~v~~E~~-~-~~~~H~hi~~vPvp~~~~~~~~~~F~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~Yf~v~~~~~ 542 (567)
|||||.+ + .+.+|+-|||||||.+++..++.||++|+.+++.||+++.. ...+....+||+.||+++|||+|||+..
T Consensus 485 viFyE~a~~l~rrpH~~IeCIPvpqeig~map~YFKkAI~esE~Ews~~~nkkliets~k~lR~~IpKglpYfhV~Fgld 564 (628)
T KOG2477|consen 485 VIFYENAPSLQRRPHTAIECIPVPQEIGSMAPAYFKKAISESEEEWSHRKNKKLIETSKKALRKMIPKGLPYFHVWFGLD 564 (628)
T ss_pred eEEEeccCccccCCceeEEEeechHHhhhhhhHHHHHHHhhhHHHHHhhhHHHHHHhhHHHHHHhcccCCCeEEEEEecc
Confidence 9999933 2 34789999999999999999999999999999999964432 1222235789999999999999999999
Q ss_pred ceEEEEecCCCccccccccccccc
Q 008383 543 TVLSHLIEENERFPAQFGREVRYA 566 (567)
Q Consensus 543 ~~~~~~i~~~~~f~~qFgR~Vla~ 566 (567)
.||+|+|+++..||-||||+|||+
T Consensus 565 ~GfaHVIEded~fpsnfa~eViag 588 (628)
T KOG2477|consen 565 GGFAHVIEDEDGFPSNFAREVIAG 588 (628)
T ss_pred CceeeeecccccCcchHHHHHHHH
Confidence 999999999999999999999986
|
|
| >PF04677 CwfJ_C_1: Protein similar to CwfJ C-terminus 1; InterPro: IPR006768 This group of sequences contain a conserved C-terminal domain which is found in the Schizosaccharomyces pombe (Fission yeast) protein Cwf19 (Q09909 from SWISSPROT) and its homologues | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=274.82 Aligned_cols=116 Identities=43% Similarity=0.850 Sum_probs=110.7
Q ss_pred ccCCCCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 008383 384 SANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQG 463 (567)
Q Consensus 384 ~~~~~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~g 463 (567)
..+.+++||||++||++++|||||+|+++||++|||||.+||+||||++|++|+.++|+++|+||++|+++|++||+++|
T Consensus 6 ~~~~~~~C~fCl~n~~~~khliisiG~~~YLalpkg~L~~gH~lIvPi~H~~s~~~~de~~~~Ei~~f~~~L~~mf~~~~ 85 (121)
T PF04677_consen 6 QNKAPDNCWFCLSNPNVEKHLIISIGDEVYLALPKGPLVPGHCLIVPIQHVPSLTELDEEVWEEIRNFQKSLRKMFASQG 85 (121)
T ss_pred cCCCCCCCCCccCCCCccceEEEEEcCcEEEEeCCCCccCCEEEEEecceecccccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 45568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEecCCCCCeeEEEEeecCcchhhHHHHHHH
Q 008383 464 KEAVFFEWLSKRGTHANLQAVPIPTSKAAAVQDIFN 499 (567)
Q Consensus 464 ~~~v~~E~~~~~~~H~hi~~vPvp~~~~~~~~~~F~ 499 (567)
+++||||....+..|+||||||||++++++++.|||
T Consensus 86 ~~vvf~E~~~~~~~H~~iq~vPvp~~~~~~~~~yFk 121 (121)
T PF04677_consen 86 KDVVFFERVRKRNPHTHIQCVPVPKELGEKAPSYFK 121 (121)
T ss_pred CCEEEEEEeCCCCcEEEEEEEEcCHHHHHhhhhhcC
Confidence 999999944666899999999999999999999996
|
Cwf19 is part of the Cdc5p complex involved in mRNA splicing []. This domain is found in association with IPR006767 from INTERPRO, which is generally C-terminal and adjacent to this domain. |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=8e-21 Score=187.72 Aligned_cols=195 Identities=17% Similarity=0.207 Sum_probs=135.6
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHH
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLL 82 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~ 82 (567)
.+|||+++|+||++..+-+.++.+ ++. .+|+||++||+...... .+++.+++.-...++.|+|+|+||||.. +..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~-~~~-~~D~vv~~GDl~~~g~~-~~~~~~~l~~l~~l~~pv~~V~GNhD~~--v~~ 78 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLA-PET-GADAIVLIGNLLPKAAK-SEDYAAFFRILGEAHLPTFYVPGPQDAP--LWE 78 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHH-hhc-CCCEEEECCCCCCCCCC-HHHHHHHHHHHHhcCCceEEEcCCCChH--HHH
Confidence 589999999999998765444433 223 48999999999664311 2234444433356778999999999854 344
Q ss_pred HHhccccccCcccCCceecccEEEeCCCCeEEEcC-eEEEEEecccCCCCCCCCCCCHHHH--------HH-HHHhhcCC
Q 008383 83 AASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHG-LSVAYLSGRQSSEGQQFGTYSQDDV--------DA-LRALAEEP 152 (567)
Q Consensus 83 ~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~G-lrIa~lgG~~~~~~~~~~~~t~~dv--------~~-L~~~~~~~ 152 (567)
.+... .....+-|+...|+. +++++.| ++|+|+||+..++ .+++|+++ +. |..+....
T Consensus 79 ~l~~~-------~~~~~~~p~~~~lh~-~~~~~~g~~~~~GlGGs~~~~----~e~sE~e~~~~~~~~~~~~l~~~~~~~ 146 (224)
T cd07388 79 YLREA-------YNAELVHPEIRNVHE-TFAFWRGPYLVAGVGGEIADE----GEPEEHEALRYPAWVAEYRLKALWELK 146 (224)
T ss_pred HHHHH-------hcccccCccceecCC-CeEEecCCeEEEEecCCcCCC----CCcCHHHHhhhhhhHHHHHHHHHHhCC
Confidence 33310 011122355566775 5667755 8999999997653 46688873 22 22232234
Q ss_pred CCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccC
Q 008383 153 GIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAP 232 (567)
Q Consensus 153 ~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~ 232 (567)
...||||||.||+|+. ..++||+++++++++.+|++++|||.|.-+| +...|.+||.|+
T Consensus 147 ~~~~VLv~H~PP~g~g-------------~~h~GS~alr~~I~~~~P~l~i~GHih~~~~--------~~g~t~vvNpg~ 205 (224)
T cd07388 147 DYRKVFLFHTPPYHKG-------------LNEQGSHEVAHLIKTHNPLVVLVGGKGQKHE--------LLGASWVVVPGD 205 (224)
T ss_pred CCCeEEEECCCCCCCC-------------CCccCHHHHHHHHHHhCCCEEEEcCCceeEE--------EeCCEEEECCCc
Confidence 5699999999999982 0379999999999999999999999773333 456799999999
Q ss_pred CCC
Q 008383 233 VGN 235 (567)
Q Consensus 233 ~g~ 235 (567)
+..
T Consensus 206 ~~~ 208 (224)
T cd07388 206 LSE 208 (224)
T ss_pred ccC
Confidence 754
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-20 Score=180.45 Aligned_cols=199 Identities=17% Similarity=0.207 Sum_probs=143.3
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCC--C--CChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFF--P--DSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 1 M~~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff--~--~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
|.+||||++.|.||+...+-+-+.....+ .+|+++++||+- . +.....+++. +.......+|+|+++||+|
T Consensus 1 ~~~mkil~vtDlHg~~~~~~k~~~~~~~~--~~D~lviaGDlt~~~~~~~~~~~~~~~--~e~l~~~~~~v~avpGNcD- 75 (226)
T COG2129 1 IKKMKILAVTDLHGSEDSLKKLLNAAADI--RADLLVIAGDLTYFHFGPKEVAEELNK--LEALKELGIPVLAVPGNCD- 75 (226)
T ss_pred CCcceEEEEeccccchHHHHHHHHHHhhc--cCCEEEEecceehhhcCchHHHHhhhH--HHHHHhcCCeEEEEcCCCC-
Confidence 66899999999999987655444443333 589999999985 3 2222222210 2223567799999999987
Q ss_pred hHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHH-hh-cCCCC
Q 008383 77 AAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA-LA-EEPGI 154 (567)
Q Consensus 77 ~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~-~~-~~~~~ 154 (567)
+..+...+... .-|++ ..+.+++|+.|.++||+.++++++.++|+|+++..... +. .....
T Consensus 76 ~~~v~~~l~~~-------------~~~v~----~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~ 138 (226)
T COG2129 76 PPEVIDVLKNA-------------GVNVH----GRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNP 138 (226)
T ss_pred hHHHHHHHHhc-------------ccccc----cceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCc
Confidence 55666655411 23333 26778999999999999999999999999999886443 32 11122
Q ss_pred ccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCC
Q 008383 155 VDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVG 234 (567)
Q Consensus 155 vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g 234 (567)
+-||+||.||+|..... |.+ ..++||.+|+++++++||+.++|||.|.. +-.+..+.|.|||.|+.+
T Consensus 139 ~~Il~~HaPP~gt~~d~-----~~g--~~hvGS~~vr~~ieefqP~l~i~GHIHEs------~G~d~iG~TivVNPG~~~ 205 (226)
T COG2129 139 VNILLTHAPPYGTLLDT-----PSG--YVHVGSKAVRKLIEEFQPLLGLHGHIHES------RGIDKIGNTIVVNPGPLG 205 (226)
T ss_pred ceEEEecCCCCCccccC-----CCC--ccccchHHHHHHHHHhCCceEEEeeeccc------ccccccCCeEEECCCCcc
Confidence 22999999999996542 222 14899999999999999999999996631 222367789999999965
|
|
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.1e-19 Score=170.66 Aligned_cols=187 Identities=16% Similarity=0.141 Sum_probs=128.8
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHHHh
Q 008383 6 ILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAAS 85 (567)
Q Consensus 6 ILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~l~ 85 (567)
||++||+||++..+.+ ..++ ..++|+||++||+............+.+ ...++|+|+|+||||... ....+
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~--~~~~D~vv~~GDl~~~~~~~~~~~~~~l---~~~~~p~~~v~GNHD~~~-~~~~~- 71 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILK--AEEADAVIVAGDITNFGGKEAAVEINLL---LAIGVPVLAVPGNCDTPE-ILGLL- 71 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhh--ccCCCEEEECCCccCcCCHHHHHHHHHH---HhcCCCEEEEcCCCCCHH-HHHhh-
Confidence 7999999999987765 2332 3368999999999765432111111333 567899999999999642 22211
Q ss_pred ccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCCCc
Q 008383 86 KNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPS 165 (567)
Q Consensus 86 ~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh~wP~ 165 (567)
.++.+.+.+ .++.++|++|.+++|...........+++++++.+..+.......+||+||.||.
T Consensus 72 ---------------~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~ilv~H~pp~ 135 (188)
T cd07392 72 ---------------TSAGLNLHG-KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSDGRLNNLLAKNLILVTHAPPY 135 (188)
T ss_pred ---------------hcCcEecCC-CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHhhhhhccCCCCeEEEECCCCc
Confidence 234455553 5667899999999997654444445788888887633333346789999999998
Q ss_pred cc-cccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcc
Q 008383 166 GV-TNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLA 231 (567)
Q Consensus 166 gI-~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~ 231 (567)
+. .+... . ....|+..+.++++..+|+++||||.|..+.. .....|.+||.|
T Consensus 136 ~~~~d~~~-----~---~~~~g~~~l~~li~~~~~~~~l~GH~H~~~~~------~~~~~~~~~n~G 188 (188)
T cd07392 136 GTAVDRVS-----G---GFHVGSKAIRKFIEERQPLLCICGHIHESRGV------DKIGNTLVVNPG 188 (188)
T ss_pred CCcccccC-----C---CCccCCHHHHHHHHHhCCcEEEEeccccccce------eeeCCeEEecCC
Confidence 84 32211 0 12479999999999999999999998765431 134568999876
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >PRK10687 purine nucleoside phosphoramidase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.1e-16 Score=137.97 Aligned_cols=101 Identities=19% Similarity=0.172 Sum_probs=80.2
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-----c
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-----Q 462 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-----~ 462 (567)
.++|.||.+.......-+|++++.++++++..|+++||+||||++|++++.+++++++.++..+.+.++++.++ .
T Consensus 2 ~~~CiFC~I~~g~~p~~~v~edd~~~aflD~~P~~~GH~LViPK~H~~~l~dl~~~~~~~l~~l~~~~~~~~~~~~~~~~ 81 (119)
T PRK10687 2 AEETIFSKIIRREIPSDIVYQDELVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAED 81 (119)
T ss_pred CCCCchhhhhcCCCCCCEEEECCCEEEEEcCCCCCCccEEEEehhHhCChhHCChHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 35799998654433345789999999999999999999999999999999999999999999998877776543 2
Q ss_pred CCceEEEE--ecCCCCCeeEEEEeecCc
Q 008383 463 GKEAVFFE--WLSKRGTHANLQAVPIPT 488 (567)
Q Consensus 463 g~~~v~~E--~~~~~~~H~hi~~vPvp~ 488 (567)
|+.+++.. ..++...|+|+|+||...
T Consensus 82 g~~l~~n~G~~agQ~V~HlHiHvI~g~~ 109 (119)
T PRK10687 82 GYRLIMNTNRHGGQEVYHIHMHLLGGRP 109 (119)
T ss_pred ceEEEEeCCCcCCcccCEEEEEECCCcc
Confidence 44444443 233446899999999754
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.9e-14 Score=134.62 Aligned_cols=199 Identities=18% Similarity=0.231 Sum_probs=120.5
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHH--------------------------HHHHh
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDE--------------------------FMNYV 57 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~--------------------------~~~~l 57 (567)
-|||+++|.+|+++.|-+.+..+..+. .|+|+.+||+...... .++ +..++
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~--~D~~v~~G~~~~~~a~-~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff 82 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKG--PDAVVFVGDLLKAEAR-SDEYERAQEEQREPDKSEINEEECYDSEALDKFF 82 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT---SEEEEES-SS-TCHH-HHHHHHHHHTT----THHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccC--CCEEEEeccccccchh-hhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHH
Confidence 499999999999998887788777773 6999999999764221 112 22455
Q ss_pred cccCCCCccEEEEccCCCChHHH-HHHHhccccccCcccCCceecccEEEeCCCCeEEEcC-eEEEEEecccCCCCCC--
Q 008383 58 EGRSEIPIPTYFIGDYGVGAAKV-LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHG-LSVAYLSGRQSSEGQQ-- 133 (567)
Q Consensus 58 ~g~~~~p~ptyfv~GN~~~~~~~-~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~G-lrIa~lgG~~~~~~~~-- 133 (567)
.-...+++||++||||+|.+.+. +..+. +..-+-+|++.+++ +++.+.| +-|+|+||........
T Consensus 83 ~~L~~~~~p~~~vPG~~Dap~~~~lr~a~----------~~e~v~p~~~~vH~-sf~~~~g~y~v~G~GGeI~~~~~~~~ 151 (255)
T PF14582_consen 83 RILGELGVPVFVVPGNMDAPERFFLREAY----------NAEIVTPHIHNVHE-SFFFWKGEYLVAGMGGEITDDQREEE 151 (255)
T ss_dssp HHHHCC-SEEEEE--TTS-SHHHHHHHHH----------HCCCC-TTEEE-CT-CEEEETTTEEEEEE-SEEESSS-BCS
T ss_pred HHHHhcCCcEEEecCCCCchHHHHHHHHh----------ccceeccceeeeee-eecccCCcEEEEecCccccCCCcccc
Confidence 54578999999999999987653 34333 12236799999994 7777887 9999999985432221
Q ss_pred -C--CCCCHHHHHHHHHhhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCc
Q 008383 134 -F--GTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVF 210 (567)
Q Consensus 134 -~--~~~t~~dv~~L~~~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f 210 (567)
. .++-+.+- .|+.+......--|||+|.+|. +. . + ..++||.++++|++..+|+..+|||.|.-
T Consensus 152 ~~LrYP~weaey-~lk~l~elk~~r~IlLfhtpPd-~~---k------g--~~h~GS~~V~dlIk~~~P~ivl~Ghihe~ 218 (255)
T PF14582_consen 152 FKLRYPAWEAEY-SLKFLRELKDYRKILLFHTPPD-LH---K------G--LIHVGSAAVRDLIKTYNPDIVLCGHIHES 218 (255)
T ss_dssp SS-EEEHHHHHH-HHGGGGGCTSSEEEEEESS-BT-BC---T------C--TBTTSBHHHHHHHHHH--SEEEE-SSS-E
T ss_pred ccccchHHHHHH-HHHHHHhcccccEEEEEecCCc-cC---C------C--cccccHHHHHHHHHhcCCcEEEecccccc
Confidence 1 11112221 2443433334578999999992 11 1 1 24799999999999999999999997654
Q ss_pred cccccccCCCCcceeEEEEccCCCC
Q 008383 211 YAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 211 yEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
-..+ ....|-.||.|.+.-
T Consensus 219 ~~~e------~lG~TlVVNPGsL~~ 237 (255)
T PF14582_consen 219 HGKE------SLGKTLVVNPGSLAE 237 (255)
T ss_dssp E--E------EETTEEEEE--BGGG
T ss_pred hhhH------HhCCEEEecCccccc
Confidence 3222 466899999999854
|
|
| >COG0537 Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.2e-15 Score=134.51 Aligned_cols=99 Identities=21% Similarity=0.205 Sum_probs=79.6
Q ss_pred CCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHH----HHhcCCc
Q 008383 390 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMY----YKNQGKE 465 (567)
Q Consensus 390 ~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~----~~~~g~~ 465 (567)
.|.||..-.......+|+++++++++++..|.++||+||||++|+.++.+++++++.+|....+.+.+. |.+.|+.
T Consensus 2 ~ciFc~ii~~e~~~~~Vye~~~~~afld~~P~~~gH~LviPk~h~~~l~~l~~~~~~~l~~~~~~ia~al~~~~~~~g~n 81 (138)
T COG0537 2 MCIFCKIIRGEIPANKVYEDEHVLAFLDIYPAAPGHTLVIPKRHVSDLEDLDPEELAELFLLAQKIAKALKEAFGADGYN 81 (138)
T ss_pred CceeeeeecCCCCceEEEeCCCEEEEecCCCCCCCeEEEEeccchhhhhhCCHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 699998543333456899999999999999999999999999999999999999999998876555554 4456776
Q ss_pred eEEEE--ecCCCCCeeEEEEeecCc
Q 008383 466 AVFFE--WLSKRGTHANLQAVPIPT 488 (567)
Q Consensus 466 ~v~~E--~~~~~~~H~hi~~vPvp~ 488 (567)
++.+- .+++-..|+|+|+||+..
T Consensus 82 i~~N~g~~agq~V~HlH~HvIPr~~ 106 (138)
T COG0537 82 IGINNGKAAGQEVFHLHIHIIPRYK 106 (138)
T ss_pred EEEecCcccCcCcceEEEEEcCCcC
Confidence 65553 234447899999999865
|
|
| >cd01275 FHIT FHIT (fragile histidine family): FHIT proteins, related to the HIT family carry a motif HxHxH/Qxx (x, is a hydrophobic amino acid), On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified into three branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.8e-14 Score=128.17 Aligned_cols=99 Identities=23% Similarity=0.268 Sum_probs=78.1
Q ss_pred CccccCCC-CCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----cCCc
Q 008383 391 CWFCLSSP-SVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGKE 465 (567)
Q Consensus 391 C~FC~~~~-~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~----~g~~ 465 (567)
|.||.... +.+...||++++.++++++..|.++||+||||++|+.++.+++++++.+|..+.+.+.+.+++ .++.
T Consensus 1 C~fC~i~~~e~~~~~iv~e~~~~~~~~~~~p~~~gh~lIiPk~H~~~~~~L~~~e~~~l~~~~~~v~~~l~~~~~~~~~n 80 (126)
T cd01275 1 CVFCDIPIKPDEDNLVFYRTKHSFAVVNLYPYNPGHVLVVPYRHVPRLEDLTPEEIADLFKLVQLAMKALKVVYKPDGFN 80 (126)
T ss_pred CccccCccCCCccccEEEeCCCEEEEEcCCCCCCCcEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 99998653 332267899999999999999999999999999999999999999999999988766666554 3444
Q ss_pred eEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 466 AVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 466 ~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
+++.. ..++...|+|+|+||+...
T Consensus 81 ~~~~~g~~~gq~v~H~HiHiiPR~~~ 106 (126)
T cd01275 81 IGINDGKAGGGIVPHVHIHIVPRWNG 106 (126)
T ss_pred EEEeCCcccCCCcCEEEEEEeCCcCC
Confidence 44333 1233468999999998654
|
Fhit plays a very important role in the development of tumours. Infact, Fhit deletions are among the earliest and most frequent genetic alterations in the development of tumours. |
| >cd01277 HINT_subgroup HINT (histidine triad nucleotide-binding protein) subgroup: Members of this CD belong to the superfamily of histidine triad hydrolases that act on alpha-phosphate of ribonucleotides | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.3e-14 Score=121.78 Aligned_cols=97 Identities=22% Similarity=0.256 Sum_probs=76.1
Q ss_pred CCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hcCCc
Q 008383 390 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK----NQGKE 465 (567)
Q Consensus 390 ~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~----~~g~~ 465 (567)
+|.||....+-....+|++++.+++++|..|..+||+||+|++|+.++.+++++++.++....+.+.+.+. ..++.
T Consensus 1 ~C~~c~ii~~e~~~~iv~e~~~~~a~~~~~~~~pg~~lI~Pk~H~~~~~~l~~~e~~~l~~~~~~v~~~l~~~~~~~~~n 80 (103)
T cd01277 1 DCIFCKIIAGEIPSYKVYEDDHVLAFLDINPASKGHTLVIPKKHYENLLDLDPEELAELILAAKKVARALKKALKADGLN 80 (103)
T ss_pred CCccccccCCCCCCCEEEeCCCEEEEECCCCCCCeeEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 59999864332223489999999999999999999999999999999999999999998887766655544 34566
Q ss_pred eEEEE--ecCCCCCeeEEEEeec
Q 008383 466 AVFFE--WLSKRGTHANLQAVPI 486 (567)
Q Consensus 466 ~v~~E--~~~~~~~H~hi~~vPv 486 (567)
.++.+ ...+...|+|+|++|+
T Consensus 81 ~~~~~~~~~g~~~~H~HiHiiPR 103 (103)
T cd01277 81 ILQNNGRAAGQVVFHVHVHVIPR 103 (103)
T ss_pred EEEeCCcccCcccCEEEEEEccC
Confidence 55554 1223368999999996
|
This subgroup includes members from all three forms of cellular life. Although the biochemical function has not been characterised for many of the members of this subgroup, the proteins from Yeast have been shown to be involved in secretion, peroxisome formation and gene expression. |
| >cd01276 PKCI_related Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.7e-13 Score=119.52 Aligned_cols=97 Identities=21% Similarity=0.193 Sum_probs=73.0
Q ss_pred CCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CC
Q 008383 390 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ-----GK 464 (567)
Q Consensus 390 ~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~-----g~ 464 (567)
+|+||....+-....||++++.+++++|..|.++||+||||++|++++.+++++.+.++..+.+.++++.+.. |+
T Consensus 1 ~C~fc~i~~~e~~~~iv~e~~~~~a~~~~~p~~~gh~lIiPk~H~~~~~dl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (104)
T cd01276 1 DCIFCKIIRGEIPAKKVYEDDEVLAFHDINPQAPVHILVIPKKHIASLSDATEEDEELLGHLLSAAAKVAKDLGIAEDGY 80 (104)
T ss_pred CCcceecccCCCccCEEEECCCEEEEECCCCCCCCEEEEEecceeCChHHcccccHHHHHHHHHHHHHHHHHhCCCCCCE
Confidence 5999986543223568999999999999999999999999999999999998888777777766665554433 34
Q ss_pred ceEEEE--ecCCCCCeeEEEEeec
Q 008383 465 EAVFFE--WLSKRGTHANLQAVPI 486 (567)
Q Consensus 465 ~~v~~E--~~~~~~~H~hi~~vPv 486 (567)
++++.. ...+...|+|+|+|+.
T Consensus 81 n~~~~~g~~~g~~v~H~HiHii~~ 104 (104)
T cd01276 81 RLVINCGKDGGQEVFHLHLHLLGG 104 (104)
T ss_pred EEEEeCCCCCCCceeEEEEEEeCC
Confidence 443333 1223357999999973
|
The members of this subgroup have a conserved HxHxHxx motif (x is a hydrophobic residue) that is a signature for this family. No enzymatic activity has been reported however, for PKCI and its related members. |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.4e-12 Score=124.52 Aligned_cols=203 Identities=21% Similarity=0.252 Sum_probs=113.9
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHH---
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKV--- 80 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~--- 80 (567)
.||+++||+||++... .++.+++ . .+|+||++||+.... . ++.+.+ ..++.|+|+|.||||.....
T Consensus 1 ~rIa~isDiHg~~~~~--~~~~l~~-~-~pD~Vl~~GDi~~~~---~-~~~~~l---~~l~~p~~~V~GNHD~~~~~~~~ 69 (238)
T cd07397 1 LRIAIVGDVHGQWDLE--DIKALHL-L-QPDLVLFVGDFGNES---V-QLVRAI---SSLPLPKAVILGNHDAWYDATFR 69 (238)
T ss_pred CEEEEEecCCCCchHH--HHHHHhc-c-CCCEEEECCCCCcCh---H-HHHHHH---HhCCCCeEEEcCCCccccccccc
Confidence 4899999999997652 2334443 2 479999999997532 2 333333 45678999999999853210
Q ss_pred --HHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEeccc-CCCCCC-------CCCC---CHHH-HHHHH
Q 008383 81 --LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQ-SSEGQQ-------FGTY---SQDD-VDALR 146 (567)
Q Consensus 81 --~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~-~~~~~~-------~~~~---t~~d-v~~L~ 146 (567)
.+.+.. .-+...+. ++. .+.+++..+.++.+|+.- +.+... +..| |-+| ++.+.
T Consensus 70 ~k~~~l~~----------~L~~lg~~-~l~-~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~iv 137 (238)
T cd07397 70 KKGDRVQE----------QLELLGDL-HCG-WGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRII 137 (238)
T ss_pred chHHHHHH----------HHHHhCCc-EEe-ecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHH
Confidence 111110 00111111 222 123345554555555541 111110 0112 2222 33322
Q ss_pred Hhh--cCCCCccEEEeCCCCccccccccc----cccccccCCCCCCcHHHHHHHHHhC----CCEEEEccCCCc--cc--
Q 008383 147 ALA--EEPGIVDLFLTNEWPSGVTNKAAA----SDMLVGISDSSNTDSTVSELVAEIK----PRYHIAGSKGVF--YA-- 212 (567)
Q Consensus 147 ~~~--~~~~~vDILLTh~wP~gI~~~~~~----~~~~~~~~~~~~Gs~~i~~l~~~lk----PRYhf~Gh~~~f--yE-- 212 (567)
+.+ ......+|||||..|.|..+.... .+.+. ...+|++-+++.+..++ |+||++||.|.- |.
T Consensus 138 e~~~~~~~~~~~VliaH~~~~G~g~~~~~~cg~d~~~~---~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~l~~~~~ 214 (238)
T cd07397 138 AAAKKAPPDLPLILLAHNGPSGLGSDAEDPCGRDWKPP---GGDWGDPDLALAISQIQQGRQVPLVVFGHMHHRLRRGKG 214 (238)
T ss_pred HHhhhcCCCCCeEEEeCcCCcCCCcccccccccccCCc---CCCCCCHHHHHHHHHHhccCCCCEEEeCCccCccccccc
Confidence 222 234567999999999999654332 11221 24689999999998888 999999996533 22
Q ss_pred -cccccCCCCcceeEEEEccCCC
Q 008383 213 -REPYSNVDAVHVTRFLGLAPVG 234 (567)
Q Consensus 213 -r~Py~~~~~~~~TRFI~L~~~g 234 (567)
|..+.. ....|.|||-|.+-
T Consensus 215 ~r~~~~~--~~~gt~y~N~a~~p 235 (238)
T cd07397 215 LRNMIAV--DREGTVYLNAASVP 235 (238)
T ss_pred ccceeee--cCCCeEEEeccccc
Confidence 222212 34579999988763
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >PF01230 HIT: HIT domain; InterPro: IPR001310 The Histidine Triad (HIT) motif, His-x-His-x-His-x-x (x, a hydrophobic amino acid) was identified as being highly conserved in a variety of organisms [] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.7e-12 Score=112.06 Aligned_cols=86 Identities=21% Similarity=0.284 Sum_probs=68.8
Q ss_pred cceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----cCCceEEEE--ecCCC
Q 008383 402 SHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGKEAVFFE--WLSKR 475 (567)
Q Consensus 402 ~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~----~g~~~v~~E--~~~~~ 475 (567)
...||++++.++++++..|.++||+||||++|+.++.+++++++.+|....+.+.+.++. .|+.++... ..++.
T Consensus 5 ~~~vv~e~~~~~~~~~~~p~~~gh~LVipk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~~g~~~gq~ 84 (98)
T PF01230_consen 5 PARVVYEDDHFVAFLDIFPISPGHLLVIPKRHVESLSDLPPEERAELMQLVQKVAKALKEAFGPDGYNVIINNGPAAGQS 84 (98)
T ss_dssp HCEEEEE-SSEEEEEESSTSSTTEEEEEESSTGSSGGGSHHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESGGGTSS
T ss_pred CeeEEEECCCEEEEEcCCCCCCeEEEEEecccccchhcCCHHHHHHHHHHHHHHHHHHhcccccceeeccccchhhhcCc
Confidence 345899999999999999999999999999999999999999999999888777766554 344444443 23344
Q ss_pred CCeeEEEEeecC
Q 008383 476 GTHANLQAVPIP 487 (567)
Q Consensus 476 ~~H~hi~~vPvp 487 (567)
..|+|+|+||+.
T Consensus 85 v~HlH~HviPR~ 96 (98)
T PF01230_consen 85 VPHLHFHVIPRY 96 (98)
T ss_dssp SSS-EEEEEEES
T ss_pred cCEEEEEEeccc
Confidence 689999999975
|
Crystal structure of rabbit Hint, purified as an adenosine and AMP-binding protein, showed that proteins in the HIT superfamily are conserved as nucleotide-binding proteins and that Hint homologues, which are found in all forms of life, are structurally related to Fhit homologues and GalT-related enzymes, which have more restricted phylogenetic profiles []. Hint homologues including rabbit Hint and yeast Hnt1 hydrolyse adenosine 5' monophosphoramide substrates such as AMP-NH2 and AMP-lysine to AMP plus the amine product and function as positive regulators of Cdk7/Kin28 in vivo []. Fhit homologues are diadenosine polyphosphate hydrolases [] and function as tumour suppressors in human and mouse [] though the tumour suppressing function of Fhit does not depend on ApppA hydrolysis []. The third branch of the HIT superfamily, which includes GalT homologues, contains a related His-X-His-X-Gln motif and transfers nucleoside monophosphate moieties to phosphorylated second substrates rather than hydrolysing them [].; PDB: 3LB5_B 1EMS_A 1Y23_A 3ANO_B 1KPE_B 1KPC_A 4EQE_B 1KPA_A 1KPB_B 4EQG_B .... |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.8e-12 Score=114.53 Aligned_cols=133 Identities=20% Similarity=0.297 Sum_probs=92.2
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhcccCCCCcc-EEEEccCCCChHHHHH
Q 008383 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGRSEIPIP-TYFIGDYGVGAAKVLL 82 (567)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~-~~~~~~~~~l~g~~~~p~p-tyfv~GN~~~~~~~~~ 82 (567)
||+++||+||++. .++ ..+.|+||++||++.... ...+.+.+++ .+.+.+ +++|.||||..
T Consensus 1 ~i~~isD~H~~~~-------~~~--~~~~D~vi~~GD~~~~~~~~~~~~~~~~l---~~~~~~~~~~v~GNHD~~----- 63 (135)
T cd07379 1 RFVCISDTHSRHR-------TIS--IPDGDVLIHAGDLTERGTLEELQKFLDWL---KSLPHPHKIVIAGNHDLT----- 63 (135)
T ss_pred CEEEEeCCCCCCC-------cCc--CCCCCEEEECCCCCCCCCHHHHHHHHHHH---HhCCCCeEEEEECCCCCc-----
Confidence 6999999999976 111 235899999999976432 1222344444 444455 58899999721
Q ss_pred HHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCC
Q 008383 83 AASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNE 162 (567)
Q Consensus 83 ~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh~ 162 (567)
. . ..+.+||+||.
T Consensus 64 --------------~----~-------------------------------------------------~~~~~ilv~H~ 76 (135)
T cd07379 64 --------------L----D-------------------------------------------------PEDTDILVTHG 76 (135)
T ss_pred --------------C----C-------------------------------------------------CCCCEEEEECC
Confidence 0 0 03579999999
Q ss_pred CCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcc
Q 008383 163 WPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLA 231 (567)
Q Consensus 163 wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~ 231 (567)
+|.++.+.... ....|+..+.++++..+|+|+|+||.|..+-.. .+ ......|.+||.|
T Consensus 77 ~p~~~~~~~~~--------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~-~~-~~~~~~t~~in~~ 135 (135)
T cd07379 77 PPYGHLDLVSS--------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE-RV-LDTDGETLFVNAS 135 (135)
T ss_pred CCCcCcccccc--------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee-Ee-cccCCCEEEEeCC
Confidence 99987543221 136899999999999999999999988665321 12 1245689999975
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >PF04676 CwfJ_C_2: Protein similar to CwfJ C-terminus 2; InterPro: IPR006767 This group of sequences contain a conserved C-terminal domain which is found in the Schizosaccharomyces pombe (Fission yeast) protein Cwf19 (Q09909 from SWISSPROT) and its homologues | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.4e-12 Score=112.84 Aligned_cols=59 Identities=36% Similarity=0.673 Sum_probs=50.3
Q ss_pred cceec--cCCCCcchhhhHhhhcCCCCCeEEEEecCCceEEEEecCCCccccccccccccc
Q 008383 508 KFLAT--KSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVRYA 566 (567)
Q Consensus 508 ~~~~~--~~~~~~~~~~~l~~~~~~~~~Yf~v~~~~~~~~~~~i~~~~~f~~qFgR~Vla~ 566 (567)
||++| ++.....++.++++++++++|||+|+|+.+++|+|+|+++++||+||||+|||+
T Consensus 1 ews~n~~kk~~~~~~~~~~~~~~~~~~~Yf~V~~~~~~~~~~vie~~~~f~~qFgReVla~ 61 (98)
T PF04676_consen 1 EWSQNEKKKLIDTSKKKGLRRSIPKGFPYFHVEFPDGKGYAHVIEDEERFPLQFGREVLAG 61 (98)
T ss_pred CccccccCCcccccChHHHHHhcCCCCCEEEEEEeCCCEEEEECCcCCccCcchHHHHHHH
Confidence 57766 443333335789999999999999999999999999999999999999999985
|
Cwf19 is part of the Cdc5p complex involved in mRNA splicing []. This domain is found in association with IPR006768 from INTERPRO, which is generally N-terminal and adjacent to this domain. |
| >cd01278 aprataxin_related aprataxin related: Aprataxin, a HINT family hydrolase is mutated in ataxia oculomotor apraxia syndrome | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.6e-11 Score=105.76 Aligned_cols=95 Identities=18% Similarity=0.116 Sum_probs=72.3
Q ss_pred CCccccCCCC-C-CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----
Q 008383 390 ECWFCLSSPS-V-ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ----- 462 (567)
Q Consensus 390 ~C~FC~~~~~-~-~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~----- 462 (567)
.|+||..... . ....||+.++.+++++|..|..+||+||||++|+.++.+++++.++++..+.+.+.+.+.+.
T Consensus 1 ~c~fc~i~~~e~~~~~~iv~~~~~~~a~~~~~p~~~~h~lIiPk~h~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~ 80 (104)
T cd01278 1 LCHFCDIAKRRDPDPEDQVYEDDRVVVFKDIYPKARHHYLVIPKEHIASLKALTKEDVPLLEHMETVGREKLLRSDNTDP 80 (104)
T ss_pred CCccccCccCCCCCCccEEEeCCCEEEEECCCCCCCceEEEEecCCCCChHHCCHhHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 4999986533 3 24679999999999999999999999999999999999999999999999987776644332
Q ss_pred -CCceEEEEecCCCCCeeEEEEe
Q 008383 463 -GKEAVFFEWLSKRGTHANLQAV 484 (567)
Q Consensus 463 -g~~~v~~E~~~~~~~H~hi~~v 484 (567)
|+.+.+.-...+...|+|+|+|
T Consensus 81 ~~~n~g~h~~p~~~v~H~H~Hvi 103 (104)
T cd01278 81 SEFRFGFHAPPFTSVSHLHLHVI 103 (104)
T ss_pred cCeEEEeCCCCCcCeeeEEEEee
Confidence 2222111111123579999997
|
All the members of this subgroup have the conserved HxHxHxx (where x is a hydrophobic residue) signature motif. Members of this subgroup are predominantly eukaryotic in origin. |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.9e-11 Score=117.66 Aligned_cols=200 Identities=12% Similarity=-0.023 Sum_probs=111.5
Q ss_pred EEEEEcCCCCCHH-----H-HHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChH
Q 008383 5 RILLCGDVLGRLN-----Q-LFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAA 78 (567)
Q Consensus 5 KILv~GDvhG~~~-----~-l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~ 78 (567)
||++++|+|.++. . +-..++.+++. ++|+||++||++........-+..+. ...+.|+|+++||||...
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~--~~d~vv~~GDl~~~~~~~~~~~~~l~---~~~~~pv~~v~GNHD~~~ 75 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQ--KIDHLHIAGDISNDFQRSLPFIEKLQ---ELKGIKVTFNAGNHDMLK 75 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhc--CCCEEEECCccccchhhHHHHHHHHH---HhcCCcEEEECCCCCCCC
Confidence 6999999997532 1 22223334333 48999999999874322111222221 114589999999998531
Q ss_pred H-HHHHHhccccccCcccCCceecccEEEeCCCCeE-EEcCeEEEEEecccCCCC--------------------CCCCC
Q 008383 79 K-VLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF-TLHGLSVAYLSGRQSSEG--------------------QQFGT 136 (567)
Q Consensus 79 ~-~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~-~~~GlrIa~lgG~~~~~~--------------------~~~~~ 136 (567)
. ....+.. . . +..+|.+..+. ..++++|.++.|-...+. .....
T Consensus 76 ~~~~~~~~~----------~--~--~~~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 141 (239)
T TIGR03729 76 DLTYEEIES----------N--D--SPLYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKRP 141 (239)
T ss_pred CCCHHHHHh----------c--c--chhhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCCC
Confidence 1 1121210 0 0 34456544432 237899999997432110 00111
Q ss_pred -----CCHHHHHHHHHh-hcCCCCccEEEeCCCCcccccc--ccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC
Q 008383 137 -----YSQDDVDALRAL-AEEPGIVDLFLTNEWPSGVTNK--AAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG 208 (567)
Q Consensus 137 -----~t~~dv~~L~~~-~~~~~~vDILLTh~wP~gI~~~--~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~ 208 (567)
+.+++++.|.+. +.....--|++||-+|...... ....... . .....||..+.++++..+|+++|+||.|
T Consensus 142 ~~~~~~~~~~l~~l~~~l~~~~~~~~ivvtH~pP~~~~~~~~~~~~~~~-~-~~~~~~s~~l~~li~~~~v~~~i~GH~H 219 (239)
T TIGR03729 142 MSDPERTAIVLKQLKKQLNQLDNKQVIFVTHFVPHRDFIYVPMDHRRFD-M-FNAFLGSQHFGQLLVKYEIKDVIFGHLH 219 (239)
T ss_pred CChHHHHHHHHHHHHHHHHhcCCCCEEEEEcccchHHHhcCCCCCcchh-h-hhhccChHHHHHHHHHhCCCEEEECCcc
Confidence 223334445442 2233456899999999653210 0000000 0 0125789999999999999999999987
Q ss_pred CccccccccCCCCcceeEEEEcc
Q 008383 209 VFYAREPYSNVDAVHVTRFLGLA 231 (567)
Q Consensus 209 ~fyEr~Py~~~~~~~~TRFI~L~ 231 (567)
..+... ....||+++-.
T Consensus 220 ~~~~~~------~i~~~~~~~~~ 236 (239)
T TIGR03729 220 RRFGPL------TIGGTTYHNRP 236 (239)
T ss_pred CCCCCE------EECCEEEEecC
Confidence 653211 23579998753
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.1e-10 Score=113.16 Aligned_cols=197 Identities=16% Similarity=0.121 Sum_probs=121.4
Q ss_pred EEEEEcCCCCC------------HHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhcccCCCCccEEEEc
Q 008383 5 RILLCGDVLGR------------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGRSEIPIPTYFIG 71 (567)
Q Consensus 5 KILv~GDvhG~------------~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~-~~~~~~~~~l~g~~~~p~ptyfv~ 71 (567)
||++++|+|=. ...+-+-++.+++...++|+||++||++.... ..-+.+.+.+ .++++|+|+|+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l---~~~~~p~~~v~ 77 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELL---AALPIPVYLLP 77 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHH---hhcCCCEEEeC
Confidence 68999999943 22333344555554346899999999976532 2222344444 45689999999
Q ss_pred cCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhh-c
Q 008383 72 DYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALA-E 150 (567)
Q Consensus 72 GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~-~ 150 (567)
||||....+...+.. .. ..+ .+. .-.+.++|++|.+|....... ....+++++++.|++.. .
T Consensus 78 GNHD~~~~~~~~~~~---------~~---~~~-~~~--~~~~~~~~~~~i~lds~~~~~--~~~~~~~~ql~wL~~~L~~ 140 (240)
T cd07402 78 GNHDDRAAMRAVFPE---------LP---PAP-GFV--QYVVDLGGWRLILLDSSVPGQ--HGGELCAAQLDWLEAALAE 140 (240)
T ss_pred CCCCCHHHHHHhhcc---------cc---ccc-ccc--ceeEecCCEEEEEEeCCCCCC--cCCEECHHHHHHHHHHHHh
Confidence 999965433332220 00 000 001 123457899999997653321 22456777777777532 2
Q ss_pred CCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeEEEE
Q 008383 151 EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLG 229 (567)
Q Consensus 151 ~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~ 229 (567)
.....-|+++|.+|........ . . ....++..+.+++... +++++|+||.|..+.+ ....+.+++
T Consensus 141 ~~~~~~il~~H~pp~~~~~~~~----~-~--~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~-------~~~g~~~~~ 206 (240)
T cd07402 141 APDKPTLVFLHHPPFPVGIAWM----D-A--IGLRNAEALAAVLARHPNVRAILCGHVHRPIDG-------SWGGIPLLT 206 (240)
T ss_pred CCCCCEEEEECCCCccCCchhh----h-h--hhCCCHHHHHHHHhcCCCeeEEEECCcCchHHe-------EECCEEEEE
Confidence 2345679999999987632110 0 0 1235678888999988 8899999998875332 234578888
Q ss_pred ccCCCC
Q 008383 230 LAPVGN 235 (567)
Q Consensus 230 L~~~g~ 235 (567)
.+..+.
T Consensus 207 ~gs~~~ 212 (240)
T cd07402 207 APSTCH 212 (240)
T ss_pred cCccee
Confidence 887754
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd00468 HIT_like HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.8e-11 Score=101.42 Aligned_cols=80 Identities=18% Similarity=0.174 Sum_probs=63.6
Q ss_pred EEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cC---CceEEEE--ecCCCCCee
Q 008383 406 VSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QG---KEAVFFE--WLSKRGTHA 479 (567)
Q Consensus 406 is~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g---~~~v~~E--~~~~~~~H~ 479 (567)
|++++++++++|..|..+||+||||++|+.++.+++++++.++....+.+.+.+++ .+ ..+++.. ...+...|+
T Consensus 1 ~~e~~~~~a~~~~~p~~~gh~lIipk~H~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~n~g~~~g~~v~H~ 80 (86)
T cd00468 1 VPDDEHSFAFVNLKPAAPGHVLVCPKRHVETLPDLDEALLADLVITAQRVAAELEKHGNVPSLTVFVNDGAAAGQSVPHV 80 (86)
T ss_pred CeecCcEEEEECCCCCCCCcEEEeCchhhCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCccCCCcCCEE
Confidence 46789999999999999999999999999999999999999999988777766643 23 2322222 122335899
Q ss_pred EEEEee
Q 008383 480 NLQAVP 485 (567)
Q Consensus 480 hi~~vP 485 (567)
|+|+||
T Consensus 81 H~hiiP 86 (86)
T cd00468 81 HLHVLP 86 (86)
T ss_pred EEEeCC
Confidence 999998
|
On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified in the literacture into three major branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases. Further sequence analysis reveals several new closely related, yet uncharacterized subgroups. |
| >KOG3275 consensus Zinc-binding protein of the histidine triad (HIT) family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.3e-11 Score=103.93 Aligned_cols=97 Identities=16% Similarity=0.155 Sum_probs=77.9
Q ss_pred CCCCccccCCC-CCCcceEEEECCEEEEEecCCCCCCCeEEEEeccc---cCCCCCCCHHHHHHHHHHHHHHHHHHH-hc
Q 008383 388 SKECWFCLSSP-SVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEH---VPNTISTSPECEKELGRFQNSLMMYYK-NQ 462 (567)
Q Consensus 388 ~~~C~FC~~~~-~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H---~~s~~~~~~~~~~E~~~~~~~L~~~~~-~~ 462 (567)
...|+||.+-. .++ .-||++++.|+++.+..|..|||.||||+.| .+...+.+++....+.-..+.+.+.+. ..
T Consensus 15 ~~~tIF~kIi~keIP-a~ii~Edd~~lAF~Di~Pqap~HfLvIPK~hi~~~s~aed~~~e~Lg~ll~~~k~vak~~Gl~~ 93 (127)
T KOG3275|consen 15 AAPTIFCKIIRKEIP-AKIIFEDDRCLAFHDIAPQAPGHFLVIPKKHITQLSKAEDRDDELLGHLLPVAKKVAKALGLED 93 (127)
T ss_pred CCCcEeeeeecccCC-cceEeeccceEEEEecCCCCCceEEEeecccccchhhcccCCHHHHHHHHHHHHHHHHHhCccc
Confidence 57899998654 344 4589999999999999999999999999999 555667788888888888887777765 45
Q ss_pred CCceEEEE-e-cCCCCCeeEEEEee
Q 008383 463 GKEAVFFE-W-LSKRGTHANLQAVP 485 (567)
Q Consensus 463 g~~~v~~E-~-~~~~~~H~hi~~vP 485 (567)
|+.+|..+ . ..+.+.|+|+|++|
T Consensus 94 gYrvv~NnG~~g~QsV~HvH~Hvlg 118 (127)
T KOG3275|consen 94 GYRVVQNNGKDGHQSVYHVHLHVLG 118 (127)
T ss_pred ceeEEEcCCcccceEEEEEEEEEeC
Confidence 78888776 2 23346899999999
|
|
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.9e-10 Score=104.93 Aligned_cols=192 Identities=12% Similarity=0.094 Sum_probs=99.0
Q ss_pred CEEEEEcCCCCCHHHH---HHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHH--hcccCCCCccEEEEccCCCChH
Q 008383 4 PRILLCGDVLGRLNQL---FKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNY--VEGRSEIPIPTYFIGDYGVGAA 78 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l---~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~--l~g~~~~p~ptyfv~GN~~~~~ 78 (567)
|||+++||+|+..... ...+.....+. +.|+||++||++............. .......+.|+|++.||||...
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~-~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~ 79 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAEN-KPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYS 79 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHT-TTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccC-CCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccce
Confidence 6999999999998877 44555554444 5799999999987654322222211 1223557899999999999764
Q ss_pred HHHHHHhccccccCcccCCceecccEEEeCCCC-eEE-EcCeEEEEEecccCCCCCCCCCCCHHHHHH-HHHhhcCCCCc
Q 008383 79 KVLLAASKNSANQGFKMDGFKVTDNLFWLKGSG-NFT-LHGLSVAYLSGRQSSEGQQFGTYSQDDVDA-LRALAEEPGIV 155 (567)
Q Consensus 79 ~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~g-v~~-~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~-L~~~~~~~~~v 155 (567)
........... ........+..+....+ ... ............... .. .......... ...+.......
T Consensus 80 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~ 151 (200)
T PF00149_consen 80 GNSFYGFYDYQ-----FEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPD-YG--MEAQQEWWLWLLLLLEAKNDDP 151 (200)
T ss_dssp HHHHHHHHHHH-----HSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHH-SE--HHHHHHHHHHHHHHHHEEEESE
T ss_pred ecccccccccc-----ccccccccccccccCcceeeecccccccccccccccc-cc--cccchhcccccccccccccccc
Confidence 32221110000 00001111111111001 000 111111111110000 00 0000111111 11122233568
Q ss_pred cEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCc
Q 008383 156 DLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVF 210 (567)
Q Consensus 156 DILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f 210 (567)
.|+++|.+|.......... .....+...+..+.+..++.++|+||.|.|
T Consensus 152 ~iv~~H~p~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 152 VIVFTHHPPYSSSSDSSSY------GNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp EEEEESSSSSTTSSSTHHH------SSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred eeEEEecCCCCcccccccc------chhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 8999999999775432110 001356789999999999999999998864
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.04 E-value=7.5e-09 Score=103.43 Aligned_cols=179 Identities=12% Similarity=0.077 Sum_probs=101.2
Q ss_pred EEEEcCCCCCH---------H----HHHHHHHHH-HhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEc
Q 008383 6 ILLCGDVLGRL---------N----QLFKRVQSV-NKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIG 71 (567)
Q Consensus 6 ILv~GDvhG~~---------~----~l~~kv~~l-~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~ 71 (567)
|.+++|.|-.. . ++.+++.+. ++-..+.|+||++||+...... +++.+.+......+.|+|+|+
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~--~~~~~~l~~l~~l~~~v~~V~ 78 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKL--EEAKLDLAWIDALPGTKVLLK 78 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCCh--HHHHHHHHHHHhCCCCeEEEe
Confidence 57899999652 1 333333333 2222358999999999743211 122222222245667899999
Q ss_pred cCCCCh----HHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecc-cCCCCC-----C-----CCC
Q 008383 72 DYGVGA----AKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGR-QSSEGQ-----Q-----FGT 136 (567)
Q Consensus 72 GN~~~~----~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~-~~~~~~-----~-----~~~ 136 (567)
||||-. ..+.+.+. ++.+++.....+.+++++|.|+.+. .+.... + ...
T Consensus 79 GNHD~~~~~~~~~~~~l~----------------~~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (232)
T cd07393 79 GNHDYWWGSASKLRKALE----------------ESRLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEK 142 (232)
T ss_pred CCccccCCCHHHHHHHHH----------------hcCeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHH
Confidence 999941 22222222 2222222234556789999988652 221110 0 011
Q ss_pred CCHHHHHHHHHh----hcC-CCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcc
Q 008383 137 YSQDDVDALRAL----AEE-PGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 211 (567)
Q Consensus 137 ~t~~dv~~L~~~----~~~-~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fy 211 (567)
+..++...|... ... ..++-|+++|.+|.... .++..+.+++++..+.+.|+||.|.+.
T Consensus 143 ~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~----------------~~~~~~~~~~~~~~v~~vl~GH~H~~~ 206 (232)
T cd07393 143 IFERELERLELSLKAAKKREKEKIKIVMLHYPPANEN----------------GDDSPISKLIEEYGVDICVYGHLHGVG 206 (232)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCC----------------CCHHHHHHHHHHcCCCEEEECCCCCCc
Confidence 223344444331 111 12467999999986541 234567788888899999999999887
Q ss_pred ccccccC
Q 008383 212 AREPYSN 218 (567)
Q Consensus 212 Er~Py~~ 218 (567)
...||..
T Consensus 207 ~~~~~~~ 213 (232)
T cd07393 207 RDRAING 213 (232)
T ss_pred ccccccc
Confidence 7777743
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.01 E-value=3e-09 Score=98.39 Aligned_cols=141 Identities=16% Similarity=0.241 Sum_probs=88.2
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHH
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLA 83 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~ 83 (567)
|||+++||+|++.+.+-+-++.+ + ..|+||++||++.. .++.+.+. ++ |+|+|.||||... +..
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~---~-~~d~vi~~GDi~~~-----~~~~~~~~---~~--~~~~v~GNHD~~~--~~~ 64 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI---N-EPDFVIILGDIFDP-----EEVLELLR---DI--PVYVVRGNHDNWA--FPN 64 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH---T-TESEEEEES-SCSH-----HHHHHHHH---HH--EEEEE--CCHSTH--HHS
T ss_pred CEEEEEeCCCCChhHHHHHHHHh---c-CCCEEEECCCchhH-----HHHHHHHh---cC--CEEEEeCCccccc--chh
Confidence 89999999999999766555655 2 37999999999872 45555553 22 8999999998542 111
Q ss_pred HhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCC
Q 008383 84 ASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEW 163 (567)
Q Consensus 84 l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh~w 163 (567)
.. ..+. +...-..++ .+..|+++|.-
T Consensus 65 ~~-----------~~~~------~~~~~~~~~-------------------------------------~~~~i~~~H~~ 90 (156)
T PF12850_consen 65 EN-----------DEEY------LLDALRLTI-------------------------------------DGFKILLSHGH 90 (156)
T ss_dssp EE-----------CTCS------SHSEEEEEE-------------------------------------TTEEEEEESST
T ss_pred hh-----------hccc------cccceeeee-------------------------------------cCCeEEEECCC
Confidence 00 0001 000000011 24678888886
Q ss_pred CccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCCcc
Q 008383 164 PSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKE 237 (567)
Q Consensus 164 P~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~~ 237 (567)
|..+. .+...+.+++...+++++|+||.|..+... ...+.++++|.++...
T Consensus 91 ~~~~~----------------~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-------~~~~~~~~~Gs~~~~~ 141 (156)
T PF12850_consen 91 PYDVQ----------------WDPAELREILSRENVDLVLHGHTHRPQVFK-------IGGIHVINPGSIGGPR 141 (156)
T ss_dssp SSSST----------------TTHHHHHHHHHHTTSSEEEESSSSSEEEEE-------ETTEEEEEE-GSSS-S
T ss_pred Ccccc----------------cChhhhhhhhcccCCCEEEcCCcccceEEE-------ECCEEEEECCcCCCCC
Confidence 66542 344567788889999999999988765542 3359999999998644
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.7e-09 Score=104.75 Aligned_cols=204 Identities=16% Similarity=0.166 Sum_probs=119.0
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCC-hhhHHHHHHHhcccCCCCcc-EEEEccCCCChHH--
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDS-SELLDEFMNYVEGRSEIPIP-TYFIGDYGVGAAK-- 79 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~-~~~~~~~~~~l~g~~~~p~p-tyfv~GN~~~~~~-- 79 (567)
.|..+++|.|+....+ + +--+-|+++.+|||-.-. .++...+.+.+ -++|.- -+.|.||||+..+
T Consensus 62 ~r~VcisdtH~~~~~i-------~-~~p~gDvlihagdfT~~g~~~ev~~fn~~~---gslph~yKIVIaGNHELtFd~e 130 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDI-------N-DIPDGDVLIHAGDFTNLGLPEEVIKFNEWL---GSLPHEYKIVIAGNHELTFDHE 130 (305)
T ss_pred eEEEEecCcccccCcc-------c-cCCCCceEEeccCCccccCHHHHHhhhHHh---ccCcceeeEEEeeccceeeccc
Confidence 5889999999975532 2 222349999999996632 22233333332 444444 5788999987633
Q ss_pred HHHHHhc---ccccc------Ccc-cCC-ceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHh
Q 008383 80 VLLAASK---NSANQ------GFK-MDG-FKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRAL 148 (567)
Q Consensus 80 ~~~~l~~---~~~~~------~~~-~~~-~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~ 148 (567)
+...+-+ ++.-+ +.+ .++ ..+-.|.+||.+..| ++.|++|.+ +.+......|.++...--..|.++
T Consensus 131 f~~~~~k~~~~~~~~p~~s~l~P~a~egv~~lLTN~iYLqD~~v-tv~G~~Iyg--spw~p~~~g~~f~l~rg~~~ld~W 207 (305)
T KOG3947|consen 131 FMADLIKDEQDAYYFPGVSKLKPEAYEGVQSLLTNCIYLQDSEV-TVRGVRIYG--SPWTPLLPGWAFNLPRGQSLLDKW 207 (305)
T ss_pred ccchhhccccceecCccccccCccccccccchhceeEEEecCcE-EEEEEEEec--CCCCcccCchhhhhhhhHhhhHHH
Confidence 1110000 00000 000 111 236678999998775 788888873 222222222222221111123334
Q ss_pred hcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHH-HHHHHhCCCEEEEccCCCccccccccCCCCcceeEE
Q 008383 149 AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVS-ELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRF 227 (567)
Q Consensus 149 ~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~-~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRF 227 (567)
....+++|||+||.+|.|..+... -.+....|+..+- .+...+||+||++||.|..|--. +...|+|
T Consensus 208 ~~ip~~iDvL~tHtPPlG~gd~~~------~~~gqr~GC~ell~tVe~rvqpk~hVfGhvhe~~Gvt------a~G~t~f 275 (305)
T KOG3947|consen 208 NQIPGGIDVLITHTPPLGHGDLVP------VFSGQRNGCVELLNTVERRVQPKYHVFGHVHEGHGVT------ADGYTTF 275 (305)
T ss_pred hcCccccceeccCCCCCCcchhcc------cccCcccCHHHHHHhHhhccccceEEeeeeecCceee------ecCcccc
Confidence 445789999999999999765422 0112467877654 44455999999999976654322 5678999
Q ss_pred EEccCC
Q 008383 228 LGLAPV 233 (567)
Q Consensus 228 I~L~~~ 233 (567)
||-.-+
T Consensus 276 ina~~C 281 (305)
T KOG3947|consen 276 INAELC 281 (305)
T ss_pred ccHHHh
Confidence 987765
|
|
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.97 E-value=7.1e-09 Score=94.19 Aligned_cols=68 Identities=18% Similarity=0.273 Sum_probs=49.4
Q ss_pred ccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCC
Q 008383 155 VDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPV 233 (567)
Q Consensus 155 vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~ 233 (567)
++||++|.||.++..... ....|+..+.+++...+|+++|+||.|..+... =++ .....|++||.+-+
T Consensus 57 ~~Ilv~H~pp~~~~~~~~---------~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~-~~~-~~~~~t~~~n~~~~ 124 (129)
T cd07403 57 VDILLTHAPPAGIGDGED---------FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ-LRI-RRVGDTTVINAYGY 124 (129)
T ss_pred cCEEEECCCCCcCcCccc---------ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc-ccc-cccCCEEEEeCCcE
Confidence 489999999987753211 135789999999999999999999987654321 000 14678999988754
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.2e-08 Score=95.56 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=43.7
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
|||++++|+||+...+-.-++.+. .....|.||++||+.+ .++.+++ .+...|+++|.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~-~~~~~d~ii~~GD~~~------~~~~~~l---~~~~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFN-LESNVDLVIHAGDLTS------PFVLKEF---EDLAAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHh-hccCCCEEEEcCCCCC------HHHHHHH---HHhCCceEEEccCCCc
Confidence 799999999999865433233333 3324899999999984 1233333 3345689999999984
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.2e-09 Score=99.38 Aligned_cols=150 Identities=9% Similarity=0.021 Sum_probs=85.8
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHHHh
Q 008383 6 ILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAAS 85 (567)
Q Consensus 6 ILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~l~ 85 (567)
|++++|+|+++......+.+.. ...++|+|+++||++..... .++..+ ......+.|+|+++||||.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~-~~~~~d~li~~GDi~~~~~~--~~~~~~-~~~~~~~~~v~~v~GNHD~--------- 67 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFP-IAPDADILVLAGDIGYLTDA--PRFAPL-LLALKGFEPVIYVPGNHEF--------- 67 (166)
T ss_pred CceEccccccCccccccccccC-CCCCCCEEEECCCCCCCcch--HHHHHH-HHhhcCCccEEEeCCCcce---------
Confidence 5789999999865443321111 22358999999999875322 111111 1124567899999999962
Q ss_pred ccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCCCc
Q 008383 86 KNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPS 165 (567)
Q Consensus 86 ~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh~wP~ 165 (567)
| ++|.|.++-.. ...+.++. +....+...+..|++||-+|.
T Consensus 68 --------------------~-----------~~~~G~~~w~~-----~~~~~~~~---~~~~~~d~~~~~vv~~HhpP~ 108 (166)
T cd07404 68 --------------------Y-----------VRIIGTTLWSD-----ISLFGEAA---ARMRMNDFRGKTVVVTHHAPS 108 (166)
T ss_pred --------------------E-----------EEEEeeecccc-----cCccchHH---HHhCCCCCCCCEEEEeCCCCC
Confidence 0 23333332111 11222332 222222334678999999998
Q ss_pred cccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcc
Q 008383 166 GVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 211 (567)
Q Consensus 166 gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fy 211 (567)
........ ..... ...++..+.++++..+++++||||.|..+
T Consensus 109 ~~~~~~~~---~~~~~-~~~~~~~l~~~~~~~~v~~~i~GH~H~~~ 150 (166)
T cd07404 109 PLSLAPQY---GDSLV-NAAFAVDLDDLILADPIDLWIHGHTHFNF 150 (166)
T ss_pred ccccCccc---cCCCc-chhhhhccHhHHhhcCCCEEEECCccccc
Confidence 65321100 00100 11455667888888899999999987653
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >TIGR00209 galT_1 galactose-1-phosphate uridylyltransferase, family 1 | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.6e-09 Score=114.19 Aligned_cols=99 Identities=13% Similarity=0.072 Sum_probs=77.4
Q ss_pred CCCccccCC-CCC-CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-c---
Q 008383 389 KECWFCLSS-PSV-ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-Q--- 462 (567)
Q Consensus 389 ~~C~FC~~~-~~~-~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~--- 462 (567)
..|.||..- ... ....||++++++++++|..|..+||+||||++|+.++.+++++++.+|....+.+.+.+.+ .
T Consensus 194 g~clfcdIi~~E~~~~~riV~End~fvAf~p~~p~~Pgh~lIiPKrH~~~~~dl~d~e~~~La~~lk~v~~~l~~~~~~~ 273 (347)
T TIGR00209 194 KSPMLVDYVKRELADKSRTVVETEHWIAVVPYWAIWPFETLLLPKAHVLRITDLTDAQRSDLALILKKLTSKYDNLFETS 273 (347)
T ss_pred CCccHHHHHHhHhhcCCeEEEECCCEEEEeccCCCCCCeEEEeeccCCCChhhCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 479999754 333 2457999999999999999999999999999999999999999999999888777766543 2
Q ss_pred -CCceEEEE-ecCCC---CCeeEEEEeecC
Q 008383 463 -GKEAVFFE-WLSKR---GTHANLQAVPIP 487 (567)
Q Consensus 463 -g~~~v~~E-~~~~~---~~H~hi~~vPvp 487 (567)
+++.++.- -.+.. ..|+|+|++|+-
T Consensus 274 ~pYn~~~h~~p~~~~~~~~~H~HihiiPrl 303 (347)
T TIGR00209 274 FPYSMGWHGAPFNGEENQHWQLHAHFYPPL 303 (347)
T ss_pred CCcceeEEecccCCCCCcEEEEEEEEeCCc
Confidence 35555444 11222 358999999973
|
This enzyme is involved in glucose and galactose interconversion. This model describes one of two extremely distantly related branches of the model pfam01087 from PFAM. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.2e-08 Score=99.77 Aligned_cols=195 Identities=15% Similarity=0.192 Sum_probs=107.1
Q ss_pred CCEEEEEcCCCC-C-----------HHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEE
Q 008383 3 PPRILLCGDVLG-R-----------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFI 70 (567)
Q Consensus 3 ~~KILv~GDvhG-~-----------~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv 70 (567)
.|||+.++|+|= . .+.+-+.++.+++...+.|+||++||+..... .+++..+.+...++++|+|++
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 689999999991 1 22333345555554335899999999976432 223333333336678999999
Q ss_pred ccCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhh-
Q 008383 71 GDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALA- 149 (567)
Q Consensus 71 ~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~- 149 (567)
+||||....+.+.+... + +.++ ..++...+.+|..|..... ....+.+.+++++.|++..
T Consensus 92 ~GNHD~~~~~~~~~~~~---------~--~~~~------~~~~~~~~~~~i~Lds~~~--g~~~G~l~~~ql~wL~~~L~ 152 (275)
T PRK11148 92 PGNHDFQPAMYSALQDA---------G--ISPA------KHVLIGEHWQILLLDSQVF--GVPHGELSEYQLEWLERKLA 152 (275)
T ss_pred CCCCCChHHHHHHHhhc---------C--CCcc------ceEEecCCEEEEEecCCCC--CCcCCEeCHHHHHHHHHHHh
Confidence 99999754444433210 0 1111 0111223456666654321 1113456788888777532
Q ss_pred cCCCCccEEEeCCCC--ccccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeE
Q 008383 150 EEPGIVDLFLTNEWP--SGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTR 226 (567)
Q Consensus 150 ~~~~~vDILLTh~wP--~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~fyEr~Py~~~~~~~~TR 226 (567)
......-|++.|..| .+..-. + . .....+..+.+++++. +.+..|+||.|..+.. ....++
T Consensus 153 ~~~~~~~vv~~hH~P~~~~~~~~-d----~----~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~-------~~~gi~ 216 (275)
T PRK11148 153 DAPERHTLVLLHHHPLPAGCAWL-D----Q----HSLRNAHELAEVLAKFPNVKAILCGHIHQELDL-------DWNGRR 216 (275)
T ss_pred hCCCCCeEEEEcCCCCCCCcchh-h----c----cCCCCHHHHHHHHhcCCCceEEEecccChHHhc-------eECCEE
Confidence 222222344444434 332110 1 0 0124567888999887 7899999998864331 123456
Q ss_pred EEEccCCC
Q 008383 227 FLGLAPVG 234 (567)
Q Consensus 227 FI~L~~~g 234 (567)
++..+..+
T Consensus 217 ~~~~ps~~ 224 (275)
T PRK11148 217 LLATPSTC 224 (275)
T ss_pred EEEcCCCc
Confidence 65544443
|
|
| >PRK11720 galactose-1-phosphate uridylyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.3e-09 Score=112.87 Aligned_cols=99 Identities=13% Similarity=0.051 Sum_probs=77.1
Q ss_pred CCCccccCCC-CCC-cceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-c---
Q 008383 389 KECWFCLSSP-SVE-SHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-Q--- 462 (567)
Q Consensus 389 ~~C~FC~~~~-~~~-~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~--- 462 (567)
..|.||.... ..+ ...||++++++++++|..|..|||+||||++|+.++.+++++++.+|....+.+.+.+.+ .
T Consensus 194 g~Clfcdii~~E~~~~~RiV~End~fvAf~p~~p~~P~h~lIiPKrH~~~~~dl~dee~~~La~~lk~v~~~l~~~~~~~ 273 (346)
T PRK11720 194 GSPLLVDYVQRELADGERIVVETEHWLAVVPYWAAWPFETLLLPKAHVLRLTDLTDAQRDDLALALKKLTSRYDNLFQCS 273 (346)
T ss_pred CCeEHHHHHHhhhhcCCeEEEECCCEEEEeccccCCCCeEEEecccCCCChhhCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5799997543 332 247999999999999999999999999999999999999999999999887766666543 2
Q ss_pred -CCceEEEEe-cCC---CCCeeEEEEeecC
Q 008383 463 -GKEAVFFEW-LSK---RGTHANLQAVPIP 487 (567)
Q Consensus 463 -g~~~v~~E~-~~~---~~~H~hi~~vPvp 487 (567)
.+.+++... .+. ...|+|+|++|+-
T Consensus 274 ~pyn~~~h~~p~~~~~~~~~H~HihiiPrl 303 (346)
T PRK11720 274 FPYSMGWHGAPFNGEENDHWQLHAHFYPPL 303 (346)
T ss_pred CCCceeEEecccCCCCCeeEEEEEEEeCCc
Confidence 345554441 111 2479999999973
|
|
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.5e-08 Score=89.59 Aligned_cols=133 Identities=17% Similarity=0.143 Sum_probs=82.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHHH
Q 008383 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAA 84 (567)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~l 84 (567)
||++++|+||+...+.+.++.+. ..|.||++||+....... . .....|+++|.||||.... +.
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~----~~d~ii~~GD~~~~~~~~--~--------~~~~~~~~~V~GNhD~~~~-~~-- 63 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFG----DVDLIIHAGDVLYPGPLN--E--------LELKAPVIAVRGNCDGEVD-FP-- 63 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhc----CCCEEEECCccccccccc--h--------hhcCCcEEEEeCCCCCcCC-cc--
Confidence 69999999999865554444432 279999999987643211 1 2234689999999984210 00
Q ss_pred hccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCCC
Q 008383 85 SKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWP 164 (567)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh~wP 164 (567)
.|....+++++ +.-|+++|.++
T Consensus 64 ---------------------~~p~~~~~~~~-------------------------------------g~~i~v~Hg~~ 85 (155)
T cd00841 64 ---------------------ILPEEAVLEIG-------------------------------------GKRIFLTHGHL 85 (155)
T ss_pred ---------------------cCCceEEEEEC-------------------------------------CEEEEEECCcc
Confidence 00001112222 34567777776
Q ss_pred ccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCCc
Q 008383 165 SGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNK 236 (567)
Q Consensus 165 ~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~ 236 (567)
...... ... .+++......|+++||.|..+.+ ....+++||.|.++.+
T Consensus 86 ~~~~~~----------------~~~-~~~~~~~~~d~vi~GHtH~~~~~-------~~~~~~~inpGs~~~~ 133 (155)
T cd00841 86 YGVKNG----------------LDR-LYLAKEGGADVVLYGHTHIPVIE-------KIGGVLLLNPGSLSLP 133 (155)
T ss_pred cccccc----------------hhh-hhhhhhcCCCEEEECcccCCccE-------EECCEEEEeCCCccCc
Confidence 544210 011 45566778899999998866443 2336899999999865
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.80 E-value=5.1e-08 Score=85.94 Aligned_cols=131 Identities=19% Similarity=0.242 Sum_probs=87.7
Q ss_pred EEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHHHhc
Q 008383 7 LLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASK 86 (567)
Q Consensus 7 Lv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~l~~ 86 (567)
+++||+|+..............+..+.|+||++||++.............+........|++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 579999999887765542223333457999999999876433222111112223668899999999983
Q ss_pred cccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCCCcc
Q 008383 87 NSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSG 166 (567)
Q Consensus 87 ~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh~wP~g 166 (567)
|+++|.+|..
T Consensus 70 ----------------------------------------------------------------------i~~~H~~~~~ 79 (131)
T cd00838 70 ----------------------------------------------------------------------ILLTHGPPYD 79 (131)
T ss_pred ----------------------------------------------------------------------EEEeccCCCC
Confidence 8899999977
Q ss_pred ccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcc
Q 008383 167 VTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLA 231 (567)
Q Consensus 167 I~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~ 231 (567)
....... ........+..++...+|.++|+||.|.++...+ ....+++|++|
T Consensus 80 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~-----~~~~~~~v~~g 131 (131)
T cd00838 80 PLDELSP--------DEDPGSEALLELLEKYGVDLVLSGHTHVYERREP-----DGGGTLYINPG 131 (131)
T ss_pred Cchhhcc--------cchhhHHHHHHHHHHhCCCEEEeCCeeccccccC-----CCCceEEecCC
Confidence 6543221 0122578899999999999999999988766542 12345666543
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >PLN02643 ADP-glucose phosphorylase | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.2e-08 Score=105.19 Aligned_cols=96 Identities=17% Similarity=0.218 Sum_probs=73.7
Q ss_pred CCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----cCC
Q 008383 389 KECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGK 464 (567)
Q Consensus 389 ~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~----~g~ 464 (567)
..|.||..... +. ||+.++++.+++|..|..+||++|||++|+.++.+++++++.+|....+.+.+.+.. .++
T Consensus 198 g~Clfcdii~~-E~--iV~en~~f~Af~p~ap~~P~evlIiPKrH~~~~~dl~~~e~~~La~ilk~v~~~l~~~~~~~py 274 (336)
T PLN02643 198 GKCSLCEVVKK-DL--LIDESSHFVSIAPFAATFPFEIWIIPRDHSSNFHEIDDDKAVDLGGLLKLMLQKISKQLNDPPY 274 (336)
T ss_pred CCCcHHHHHhC-cc--EEEeCCCEEEEeccccCCCCEEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 47999975432 22 899999999999999999999999999999999999999999999887766655432 245
Q ss_pred ceEEEEe-c---CCC--CCeeEEEEeecC
Q 008383 465 EAVFFEW-L---SKR--GTHANLQAVPIP 487 (567)
Q Consensus 465 ~~v~~E~-~---~~~--~~H~hi~~vPvp 487 (567)
++++... . .+. ..|+|+|++|+-
T Consensus 275 N~~~~~~P~~~~~~~~~~~H~hihi~PRl 303 (336)
T PLN02643 275 NYMIQTSPLGVEESNLPYTHWFLQIVPQL 303 (336)
T ss_pred eeeeecCCCccccCcccceEEEEEEecCc
Confidence 6555551 1 111 257777999964
|
|
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.2e-07 Score=91.58 Aligned_cols=162 Identities=17% Similarity=0.193 Sum_probs=91.9
Q ss_pred CCEEEEEcCCCCCHH----HHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChH
Q 008383 3 PPRILLCGDVLGRLN----QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAA 78 (567)
Q Consensus 3 ~~KILv~GDvhG~~~----~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~ 78 (567)
.|||++++|+|.... .+-+.++.+++ . ..|+||++||++.........+.+++.. ...+.|+|++.||||...
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~-~-~~d~vl~~GD~~~~~~~~~~~~~~~l~~-l~~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINA-L-KPDLVVLTGDLVDGSVDVLELLLELLKK-LKAPLGVYAVLGNHDYYS 77 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhc-c-CCCEEEEcCcccCCcchhhHHHHHHHhc-cCCCCCEEEECCCccccc
Confidence 379999999998643 23223333333 2 3699999999987543322345555543 335689999999999642
Q ss_pred HH----HHHHhccccccCcccCCceecccEEEeCCCCeE-EEcCeEEEEEecccCCCCCCCCCCCHHHHH-HHHHhhcCC
Q 008383 79 KV----LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF-TLHGLSVAYLSGRQSSEGQQFGTYSQDDVD-ALRALAEEP 152 (567)
Q Consensus 79 ~~----~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~-~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~-~L~~~~~~~ 152 (567)
.. .+.+. ..++.+|....+. +..|.+|.-+|-.... . ..++.. .+... ..
T Consensus 78 ~~~~~~~~~l~---------------~~~v~~L~~~~~~~~~~~~~i~i~G~~~~~-~------~~~~~~~~~~~~--~~ 133 (223)
T cd07385 78 GDEENWIEALE---------------SAGITVLRNESVEISVGGATIGIAGVDDGL-G------RRPDLEKALKGL--DE 133 (223)
T ss_pred CchHHHHHHHH---------------HcCCEEeecCcEEeccCCeEEEEEeccCcc-c------cCCCHHHHHhCC--CC
Confidence 21 11111 2466777654433 3567666665522110 0 011111 22221 23
Q ss_pred CCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccc
Q 008383 153 GIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPY 216 (567)
Q Consensus 153 ~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py 216 (567)
..+.|+|+|. |..+.. +......|.++||.|..=-+.|+
T Consensus 134 ~~~~I~l~H~-P~~~~~------------------------~~~~~~dl~l~GHtHggqi~~~~ 172 (223)
T cd07385 134 DDPNILLAHQ-PDTAEE------------------------AAAWGVDLQLSGHTHGGQIRLPG 172 (223)
T ss_pred CCCEEEEecC-CChhHH------------------------hcccCccEEEeccCCCCEEeccc
Confidence 5689999998 332211 13447779999998866444443
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.75 E-value=4.9e-07 Score=92.23 Aligned_cols=198 Identities=14% Similarity=0.060 Sum_probs=105.3
Q ss_pred EEEEEcCCC--CC-----------HHHHHHHHHHHHhhcCCCcEEEEecCCCCCChh-hHHHHHHHhcccCCCCccEEEE
Q 008383 5 RILLCGDVL--GR-----------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-LLDEFMNYVEGRSEIPIPTYFI 70 (567)
Q Consensus 5 KILv~GDvh--G~-----------~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~-~~~~~~~~l~g~~~~p~ptyfv 70 (567)
||++++|+| .+ .+.+-+.++.+++. ++|+||++||+...... ..+++..+..-...+++|+|++
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~--~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v 79 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRE--SLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHV 79 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcC--CCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEe
Confidence 799999999 21 23344445666544 38999999999754321 1123333322225577999999
Q ss_pred ccCCCChHHHHHHHhccccccCcccCCceecccEEEeCC-CCeEEEcCeEEEEEecccCCCC----C-------------
Q 008383 71 GDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKG-SGNFTLHGLSVAYLSGRQSSEG----Q------------- 132 (567)
Q Consensus 71 ~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~-~gv~~~~GlrIa~lgG~~~~~~----~------------- 132 (567)
+||||........... ... ..++. .-.++.+|.++.+|.+...... .
T Consensus 80 ~GNHD~~~~~~~~~~~--------------~~~-~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~ 144 (267)
T cd07396 80 LGNHDLYNPSREYLLL--------------YTL-LGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNSNL 144 (267)
T ss_pred cCccccccccHhhhhc--------------ccc-cCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhchh
Confidence 9999854211111100 000 00110 0122346778888876421100 0
Q ss_pred -----------CCCCCCHHHHHHHHHhh-c--CCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-
Q 008383 133 -----------QFGTYSQDDVDALRALA-E--EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI- 197 (567)
Q Consensus 133 -----------~~~~~t~~dv~~L~~~~-~--~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l- 197 (567)
..+.+.++++..|+... . .....=|+++|.+|..... ... ........+.++++..
T Consensus 145 ~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~~~viV~~Hhp~~~~~~-~~~--------~~~~~~~~~~~ll~~~~ 215 (267)
T cd07396 145 GLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANGEKVIIFSHFPLHPEST-SPH--------GLLWNHEEVLSILRAYG 215 (267)
T ss_pred hhhccCccceeccCcCCHHHHHHHHHHHHHHHhcCCeEEEEEeccCCCCCC-Ccc--------ccccCHHHHHHHHHhCC
Confidence 01245677777666532 1 1122238999988754321 010 0122346677788774
Q ss_pred CCCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 198 KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 198 kPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
+.+++|+||.|...... ...+.|+..+....
T Consensus 216 ~V~~v~~GH~H~~~~~~-------~~gi~~~~~~a~~~ 246 (267)
T cd07396 216 CVKACISGHDHEGGYAQ-------RHGIHFLTLEGMVE 246 (267)
T ss_pred CEEEEEcCCcCCCCccc-------cCCeeEEEechhhc
Confidence 67899999988764321 22455555555443
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.7e-07 Score=89.97 Aligned_cols=68 Identities=7% Similarity=0.087 Sum_probs=46.5
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh-------hhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-------ELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~-------~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
|||++++|+||++..+ +++.++.++. +.|.||++||++.... ....++.+.+ .+.+.++++|.||||.
T Consensus 1 mri~viSD~Hg~~~~~-~~~l~~~~~~-~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l---~~~~~~v~~V~GNhD~ 75 (182)
T PRK09453 1 MKLMFASDTHGSLPAT-EKALELFAQS-GADWLVHLGDVLYHGPRNPLPEGYAPKKVAELL---NAYADKIIAVRGNCDS 75 (182)
T ss_pred CeEEEEEeccCCHHHH-HHHHHHHHhc-CCCEEEEcccccccCcCCCCccccCHHHHHHHH---HhcCCceEEEccCCcc
Confidence 7999999999998754 3444433333 4799999999975321 0123445544 3455689999999984
|
|
| >PHA03008 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.7e-08 Score=93.65 Aligned_cols=93 Identities=15% Similarity=0.141 Sum_probs=61.7
Q ss_pred cccEEEeCCCCeEEE----cCeEEEEEecccCCC--CCC--------CCCCCHHHHHHHHHhhcCCCCccEEEeCCCCcc
Q 008383 101 TDNLFWLKGSGNFTL----HGLSVAYLSGRQSSE--GQQ--------FGTYSQDDVDALRALAEEPGIVDLFLTNEWPSG 166 (567)
Q Consensus 101 ~~Nl~~Lg~~gv~~~----~GlrIa~lgG~~~~~--~~~--------~~~~t~~dv~~L~~~~~~~~~vDILLTh~wP~g 166 (567)
..|++||..+++ ++ .|++|.|-.- .+. ++. .+.|..++-+.+.-+...+ .+||||||.||.|
T Consensus 98 ~gnIIYLeDs~V-tI~f~~rgIKIYGSP~--sP~~~F~~sai~k~~~~wAf~~~~d~~i~wwn~IP-~tDILITHgPP~G 173 (234)
T PHA03008 98 ELDIIILRDDLI-EFDFFDDIIKIYGQSH--IEDKKFKNSHIHKALEGIAHIKKNDDEINYRNHIP-KCDILITASPPFA 173 (234)
T ss_pred CCCEEEEeCCcE-EEEecCCceEEECCCC--CcchhcccccccccccccccccCccccchhhccCC-CCCEEEeCCCCcc
Confidence 358999998887 55 6888884322 222 111 1334322111221222234 4999999999999
Q ss_pred ccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCc
Q 008383 167 VTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVF 210 (567)
Q Consensus 167 I~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f 210 (567)
+.|. .+|++.+.+-+.++|||||++||.-.|
T Consensus 174 hLD~-------------~vGC~~Ll~~I~rVKPKyHVFGh~~~~ 204 (234)
T PHA03008 174 ILDD-------------DLACGDLFSKVIKIKPKFHIFNGLTQF 204 (234)
T ss_pred cccc-------------ccCcHHHHHHHHHhCCcEEEeCCcccc
Confidence 9752 479999999999999999999995444
|
|
| >cd00608 GalT Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.4e-08 Score=104.92 Aligned_cols=100 Identities=17% Similarity=0.193 Sum_probs=76.2
Q ss_pred CCCccccCC-CCC-CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-c---
Q 008383 389 KECWFCLSS-PSV-ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-Q--- 462 (567)
Q Consensus 389 ~~C~FC~~~-~~~-~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~--- 462 (567)
..|.||... ... ....||++++++.+++|-.|..|+|+||||++|+.++.+++++++.+|....+.+.+.+.+ .
T Consensus 184 g~clfcdii~~E~~~~~riV~end~~va~~p~~~~~P~e~lIiPKrH~~~~~dl~~~e~~~La~~l~~v~~~l~~~~~~~ 263 (329)
T cd00608 184 GRCLLCDYLKLELESKERIVVENEHFVAVVPFWARWPFEVHILPKRHVSRFTDLTDEEREDLAEILKRLLARYDNLFNCS 263 (329)
T ss_pred CCccHHHHHHhhhhcCCeEEEeCCCEEEEEecCCCCCcEEEEecCCCcCChhHCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 579999743 222 2467999999999999999999999999999999999999999999999988777755543 2
Q ss_pred -CCceEEEEe-cCC-----CCCeeEEEEeecCc
Q 008383 463 -GKEAVFFEW-LSK-----RGTHANLQAVPIPT 488 (567)
Q Consensus 463 -g~~~v~~E~-~~~-----~~~H~hi~~vPvp~ 488 (567)
++.+++... .+. ...|+|+|++|+-.
T Consensus 264 ~pyn~~~h~~P~~~~~~~~~~~H~Hihi~Pr~~ 296 (329)
T cd00608 264 FPYSMGWHQAPTGGKELENWYYHWHFEIPPRRS 296 (329)
T ss_pred CCeEEEEeccCCCCCcCCcceEEEEEEeCCCcC
Confidence 344444331 111 24699999999743
|
The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer. |
| >PF11969 DcpS_C: Scavenger mRNA decapping enzyme C-term binding; PDB: 1VLR_B 1XMM_D 1XML_B 1ST0_A 3BLA_B 3BL9_B 3BL7_B 1ST4_B 1XQU_B | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.4e-08 Score=90.51 Aligned_cols=99 Identities=19% Similarity=0.269 Sum_probs=69.1
Q ss_pred CCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEecc-ccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----
Q 008383 390 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVE-HVPNTISTSPECEKELGRFQNSLMMYYKNQGK---- 464 (567)
Q Consensus 390 ~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~-H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~g~---- 464 (567)
+|.||......+...|++.++.+.++-+..|..+-|+||||.+ |+.|+.+|+.+-..-|.+++....+++++.+.
T Consensus 1 ~cif~~i~~~~~~~~vly~d~~~v~~~D~~P~a~~H~LviPk~~~i~sl~~L~~~~~~lL~~m~~~~~~~~~~~~~~~~~ 80 (116)
T PF11969_consen 1 NCIFCIIIRGEEPERVLYEDDDFVVFKDIYPKAPVHLLVIPKDPHIRSLRDLTPEHLPLLERMREVARELLKEEYPGDLD 80 (116)
T ss_dssp HHHHHHHTTSSSGGGESEEETSEEEEE-TT-SCCEEEEEEESSSS-SSGGG--GGGHHHHHHHHHHHHHHHHHHH-TT-E
T ss_pred CccceEeEcCCCCCcEEEEeCCEEEeeCCCCCcCcEEEEEeecCCCCChHHcCHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 4999987655455668899999999999999999999999999 99999999887777777776666666554321
Q ss_pred --c-eEEEEecCCCCCeeEEEEeecCcc
Q 008383 465 --E-AVFFEWLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 465 --~-~v~~E~~~~~~~H~hi~~vPvp~~ 489 (567)
. .+.|. ......|+|+|+|..+..
T Consensus 81 ~~~~~~gfH-~~PS~~HLHlHvi~~~~~ 107 (116)
T PF11969_consen 81 SDDIRLGFH-YPPSVYHLHLHVISPDFD 107 (116)
T ss_dssp GGGEEEEEE-SS-SSSS-EEEEEETTS-
T ss_pred hhhhccccc-CCCCcceEEEEEccCCCc
Confidence 1 23344 334568999999997764
|
|
| >KOG3379 consensus Diadenosine polyphosphate hydrolase and related proteins of the histidine triad (HIT) family [Nucleotide transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.73 E-value=8.9e-08 Score=85.19 Aligned_cols=89 Identities=13% Similarity=0.201 Sum_probs=69.7
Q ss_pred CCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCc--eEEEE---ecC
Q 008383 400 VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ-GKE--AVFFE---WLS 473 (567)
Q Consensus 400 ~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~-g~~--~v~~E---~~~ 473 (567)
+...-|++...++|++....|+.|||+||+|++-++.+.+|+.++..+|..-.+.+.+++++. +.+ .|.+. -++
T Consensus 14 i~~~~VFykT~~sfafvNlkPvvpgHVLv~P~R~vpRl~dLt~~E~aDlF~t~~~v~~~lek~~~~ts~ti~iQDG~~AG 93 (150)
T KOG3379|consen 14 IPPDHVFYKTKHSFAFVNLKPVVPGHVLVSPLRVVPRLTDLTAAETADLFTTVQKVQRVLEKHYNATSLTIAIQDGPEAG 93 (150)
T ss_pred CCcceEEEeccceEEEEeccccccceEEEeccccccccccCCcHHHHHHHHHHHHHHHHHHHHhcccceEEEeccccccC
Confidence 343458899999999999999999999999999999999999988888887777777777753 222 22232 234
Q ss_pred CCCCeeEEEEeecCc
Q 008383 474 KRGTHANLQAVPIPT 488 (567)
Q Consensus 474 ~~~~H~hi~~vPvp~ 488 (567)
+-.+|+|+|++|+-.
T Consensus 94 QTVpHvHvHIlPR~~ 108 (150)
T KOG3379|consen 94 QTVPHVHVHILPRKA 108 (150)
T ss_pred cccceeEEEEccccc
Confidence 447899999999743
|
|
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.3e-06 Score=80.04 Aligned_cols=63 Identities=14% Similarity=0.053 Sum_probs=42.3
Q ss_pred EEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcc
Q 008383 157 LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLA 231 (567)
Q Consensus 157 ILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~ 231 (567)
|+++|.+|......... ...+...+.++++..+++++++||.|..+-.. +......|-+|+.|
T Consensus 81 iv~~Hhp~~~~~~~~~~---------~~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~---~~~~~~~~~~~~aG 143 (144)
T cd07400 81 IVVLHHPLVPPPGSGRE---------RLLDAGDALKLLAEAGVDLVLHGHKHVPYVGN---ISNAGGGLVVIGAG 143 (144)
T ss_pred EEEecCCCCCCCccccc---------cCCCHHHHHHHHHHcCCCEEEECCCCCcCeee---ccCCCCCEEEEecC
Confidence 89999999877432111 12367889999999999999999988654321 11124456666655
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.5e-06 Score=81.22 Aligned_cols=140 Identities=16% Similarity=0.094 Sum_probs=88.4
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCC-CCccEEEEccCCCChHHHH
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE-IPIPTYFIGDYGVGAAKVL 81 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~-~p~ptyfv~GN~~~~~~~~ 81 (567)
.|||||++|.|++... ..+..++.... ++|+||++||+..+.. +..+ .. +..++|+|-||+|.... .
T Consensus 1 ~m~ilviSDtH~~~~~-~~~~~~~~~~~-~~d~vih~GD~~~~~~-----~~~l----~~~~~~~i~~V~GN~D~~~~-~ 68 (172)
T COG0622 1 MMKILVISDTHGPLRA-IEKALKIFNLE-KVDAVIHAGDSTSPFT-----LDAL----EGGLAAKLIAVRGNCDGEVD-Q 68 (172)
T ss_pred CcEEEEEeccCCChhh-hhHHHHHhhhc-CCCEEEECCCcCCccc-----hHHh----hcccccceEEEEccCCCccc-c
Confidence 4899999999999873 34444444444 5899999999977532 2222 22 45789999999985310 0
Q ss_pred HHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeC
Q 008383 82 LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTN 161 (567)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh 161 (567)
.-+....+++++|+||+.+=|-
T Consensus 69 -----------------------~~~p~~~~~~~~g~ki~l~HGh----------------------------------- 90 (172)
T COG0622 69 -----------------------EELPEELVLEVGGVKIFLTHGH----------------------------------- 90 (172)
T ss_pred -----------------------ccCChhHeEEECCEEEEEECCC-----------------------------------
Confidence 1112245677888888766553
Q ss_pred CCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCCcc
Q 008383 162 EWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKE 237 (567)
Q Consensus 162 ~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~~ 237 (567)
=..+ ...-..+..+++....-..++||.|..... ....+.+||+|++-.+.
T Consensus 91 --~~~~----------------~~~~~~l~~la~~~~~Dvli~GHTH~p~~~-------~~~~i~~vNPGS~s~pr 141 (172)
T COG0622 91 --LYFV----------------KTDLSLLEYLAKELGADVLIFGHTHKPVAE-------KVGGILLVNPGSVSGPR 141 (172)
T ss_pred --cccc----------------ccCHHHHHHHHHhcCCCEEEECCCCcccEE-------EECCEEEEcCCCcCCCC
Confidence 2211 011234556666666777888998754221 23459999999986543
|
|
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.7e-06 Score=83.02 Aligned_cols=134 Identities=15% Similarity=0.162 Sum_probs=81.3
Q ss_pred EEEEEcCCC-CCHH-HHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHH
Q 008383 5 RILLCGDVL-GRLN-QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLL 82 (567)
Q Consensus 5 KILv~GDvh-G~~~-~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~ 82 (567)
.|+|++|+| |.-. .+-+.+.++.+. +.+|.+|++||+... +..+++ ..+..|+++|.||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~-~~~d~iih~GDi~~~------~~~~~l---~~~~~~~~~V~GN~D~~~---- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP-GKIQHVLCTGNLCSK------ETYDYL---KTIAPDVHIVRGDFDENL---- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc-CCCCEEEECCCCCCH------HHHHHH---HhhCCceEEEECCCCccc----
Confidence 489999999 5422 222234444333 358999999999762 233333 222347899999997320
Q ss_pred HHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCC
Q 008383 83 AASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNE 162 (567)
Q Consensus 83 ~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh~ 162 (567)
. |...-+++++|++ |+++|-
T Consensus 67 ~-----------------------lp~~~~~~~~g~~-------------------------------------i~l~HG 86 (178)
T cd07394 67 N-----------------------YPETKVITVGQFK-------------------------------------IGLIHG 86 (178)
T ss_pred c-----------------------CCCcEEEEECCEE-------------------------------------EEEEEC
Confidence 0 1111233445544 456666
Q ss_pred CCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 163 WPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 163 wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
++.+.. .....+..+++...+.+.++||.|..+.+ ....+++||+|+++.
T Consensus 87 ~~~~~~----------------~~~~~~~~~~~~~~~dvii~GHTH~p~~~-------~~~g~~viNPGSv~~ 136 (178)
T cd07394 87 HQVVPW----------------GDPDSLAALQRQLDVDILISGHTHKFEAF-------EHEGKFFINPGSATG 136 (178)
T ss_pred CcCCCC----------------CCHHHHHHHHHhcCCCEEEECCCCcceEE-------EECCEEEEECCCCCC
Confidence 553221 12345667777788899999998864332 123599999999974
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.2e-06 Score=90.05 Aligned_cols=215 Identities=16% Similarity=0.122 Sum_probs=113.6
Q ss_pred CCEEEEEcCCCC---CHHHHHHHHHHHHhhcCCCcEEEEecCCCCCC-h---hhHHHHHHHhcccCCCCccEEEEccCCC
Q 008383 3 PPRILLCGDVLG---RLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDS-S---ELLDEFMNYVEGRSEIPIPTYFIGDYGV 75 (567)
Q Consensus 3 ~~KILv~GDvhG---~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~-~---~~~~~~~~~l~g~~~~p~ptyfv~GN~~ 75 (567)
..|++|+||.+. .-..++++ +.+...++|+||++||+.-.. . ..-+.+.+.++. ....+|+|+++||||
T Consensus 4 ~~~f~v~gD~~~~~~~~~~~~~~---l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~-~~~~~P~~~~~GNHD 79 (294)
T cd00839 4 PFKFAVFGDMGQNTNNSTNTLDH---LEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEP-LASYVPYMVTPGNHE 79 (294)
T ss_pred cEEEEEEEECCCCCCCcHHHHHH---HHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHH-HHhcCCcEEcCcccc
Confidence 468999999995 33444444 433233689999999996321 1 112233333321 123589999999998
Q ss_pred ChHHHHHHHhccccc-cCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHH-hhcCC-
Q 008383 76 GAAKVLLAASKNSAN-QGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA-LAEEP- 152 (567)
Q Consensus 76 ~~~~~~~~l~~~~~~-~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~-~~~~~- 152 (567)
............... ............+.+| .+++++++|.+|....... ......++++.|++ |+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-----sf~~g~v~fi~Lds~~~~~---~~~~~~~q~~WL~~~L~~~~~ 151 (294)
T cd00839 80 ADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWY-----SFDVGPVHFVSLSTEVDFY---GDGPGSPQYDWLEADLAKVDR 151 (294)
T ss_pred cccCCCCcccccccccccccCCCCCCCCCceE-----EEeeCCEEEEEEecccccc---cCCCCcHHHHHHHHHHHHhcc
Confidence 542110000000000 0000000000112221 2346788999886543211 11334555665554 22211
Q ss_pred --CCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCC---------CC
Q 008383 153 --GIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNV---------DA 221 (567)
Q Consensus 153 --~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~---------~~ 221 (567)
.+.-|+++|.++.......... . ........+.+|+++.+....|+||.|.|--..|..+. ..
T Consensus 152 ~~~~~~iv~~H~P~~~~~~~~~~~----~--~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~~~~~ 225 (294)
T cd00839 152 SKTPWIIVMGHRPMYCSNTDHDDC----I--EGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSN 225 (294)
T ss_pred cCCCeEEEEeccCcEecCcccccc----c--hhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccccccC
Confidence 2456899999987543211100 0 01234567888899999999999999865445564331 12
Q ss_pred cceeEEEEccCCCC
Q 008383 222 VHVTRFLGLAPVGN 235 (567)
Q Consensus 222 ~~~TRFI~L~~~g~ 235 (567)
...|.+|-.|.-|.
T Consensus 226 ~~g~~yiv~G~~G~ 239 (294)
T cd00839 226 PKGPVHIVIGAGGN 239 (294)
T ss_pred CCccEEEEECCCcc
Confidence 34678887777776
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.6e-06 Score=84.55 Aligned_cols=201 Identities=15% Similarity=0.113 Sum_probs=102.0
Q ss_pred CEEEEEcCCCCCH------HHHHHHHHHHHhhcCCCcEEEEecCCCCC----C--hhhHHHHHHHhcccCCCCccEEEEc
Q 008383 4 PRILLCGDVLGRL------NQLFKRVQSVNKSAGPFDAVLCVGQFFPD----S--SELLDEFMNYVEGRSEIPIPTYFIG 71 (567)
Q Consensus 4 ~KILv~GDvhG~~------~~l~~kv~~l~~k~GpfD~vi~~GDff~~----~--~~~~~~~~~~l~g~~~~p~ptyfv~ 71 (567)
|||++++|+|... +.+.+.+. ......|+|+++||+|.. + .....++.+.+....+.++|+|++.
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~---~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~ 77 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLR---GEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMH 77 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHH---hhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 7899999999542 12333332 222247999999999852 1 1112334444444355668999999
Q ss_pred cCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcC
Q 008383 72 DYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEE 151 (567)
Q Consensus 72 GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~ 151 (567)
||||... ...+.. ..++..|....+++++|.+|...-|-...... ..-..++++..
T Consensus 78 GNHD~~~--~~~~~~--------------~~g~~~l~~~~~~~~~g~~i~l~HGd~~~~~d-------~~y~~~r~~~r- 133 (241)
T PRK05340 78 GNRDFLL--GKRFAK--------------AAGMTLLPDPSVIDLYGQRVLLLHGDTLCTDD-------KAYQRFRRKVR- 133 (241)
T ss_pred CCCchhh--hHHHHH--------------hCCCEEeCCcEEEEECCEEEEEECCcccccCC-------HHHHHHHHHHh-
Confidence 9998421 111110 12345555555667899999888776431111 11111222111
Q ss_pred CCCccEEEeCCCCcccc----cc----ccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcc
Q 008383 152 PGIVDLFLTNEWPSGVT----NK----AAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVH 223 (567)
Q Consensus 152 ~~~vDILLTh~wP~gI~----~~----~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~ 223 (567)
.+.=+.+-+..|.... .. +..........-.......+.++++...+++.++||.|.--. ..+.. ...
T Consensus 134 -~~~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~-~~~~~--~~~ 209 (241)
T PRK05340 134 -NPWLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI-HQLQA--GGQ 209 (241)
T ss_pred -CHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce-eeccC--CCc
Confidence 1111111122332210 00 000000000001234456788999999999999999774211 11111 111
Q ss_pred eeEEEEccCCCC
Q 008383 224 VTRFLGLAPVGN 235 (567)
Q Consensus 224 ~TRFI~L~~~g~ 235 (567)
.-+.++||.+..
T Consensus 210 ~~~~~~lgdw~~ 221 (241)
T PRK05340 210 PATRIVLGDWHE 221 (241)
T ss_pred ceEEEEeCCCCC
Confidence 236899999964
|
|
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.48 E-value=7.9e-06 Score=82.86 Aligned_cols=185 Identities=10% Similarity=-0.026 Sum_probs=99.4
Q ss_pred CCEEEEEcCCCCCHH----------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChhh------HHHHHHHhccc
Q 008383 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL------LDEFMNYVEGR 60 (567)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~------~~~~~~~l~g~ 60 (567)
+.++++++|+|-... .+-..++.+++.....|+||++||++...... ...+.+.+..
T Consensus 4 ~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~- 82 (262)
T cd07395 4 PFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSL- 82 (262)
T ss_pred CEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhh-
Confidence 568999999998742 11122333433333579999999997653221 1233344322
Q ss_pred CCCCccEEEEccCCCCh----HHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCC
Q 008383 61 SEIPIPTYFIGDYGVGA----AKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGT 136 (567)
Q Consensus 61 ~~~p~ptyfv~GN~~~~----~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~ 136 (567)
...++|+|+++||||.. ...+..+.. ...+. + -.++.+|+++..|.............
T Consensus 83 ~~~~vp~~~i~GNHD~~~~~~~~~~~~f~~------------~~g~~-~-----y~~~~~~~~~i~lds~~~~~~~~~~~ 144 (262)
T cd07395 83 LDPDIPLVCVCGNHDVGNTPTEESIKDYRD------------VFGDD-Y-----FSFWVGGVFFIVLNSQLFFDPSEVPE 144 (262)
T ss_pred ccCCCcEEEeCCCCCCCCCCChhHHHHHHH------------HhCCc-c-----eEEEECCEEEEEeccccccCcccccc
Confidence 22378999999999852 111111110 00011 0 12346788888775432211111123
Q ss_pred CCHHHHHHHHHh-hcC---CCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCc
Q 008383 137 YSQDDVDALRAL-AEE---PGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVF 210 (567)
Q Consensus 137 ~t~~dv~~L~~~-~~~---~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f 210 (567)
...++++.|++. ... ....-|+++|.||...........+. ........+.+++++......||||.|..
T Consensus 145 ~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~----~~~~~~~~l~~ll~~~~V~~v~~GH~H~~ 218 (262)
T cd07395 145 LAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFN----IPKSVRKPLLDKFKKAGVKAVFSGHYHRN 218 (262)
T ss_pred chHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCC----cCHHHHHHHHHHHHhcCceEEEECccccC
Confidence 456667766653 211 23467999999996432110000000 00112346777888889999999998854
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.48 E-value=6.3e-07 Score=87.92 Aligned_cols=175 Identities=16% Similarity=0.151 Sum_probs=89.4
Q ss_pred EEEEEcCCCCC-H----------H---HHHHHHHHHHhhcCCCcEEEEecCCCCCCh---hhHHHHHHHhcccCCCCccE
Q 008383 5 RILLCGDVLGR-L----------N---QLFKRVQSVNKSAGPFDAVLCVGQFFPDSS---ELLDEFMNYVEGRSEIPIPT 67 (567)
Q Consensus 5 KILv~GDvhG~-~----------~---~l~~kv~~l~~k~GpfD~vi~~GDff~~~~---~~~~~~~~~l~g~~~~p~pt 67 (567)
||+.++|+|=. . . ..++++.....+. ..|+||++||+|.... .....+.+++.......+|+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEE-KVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhc-CCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCE
Confidence 69999999932 1 1 1233332222233 4799999999987532 22334444443222247899
Q ss_pred EEEccCCCChHHHHHHHhccccccCcccCCceecccEEEeC---C-CCeE--E--EcCeEEEEEecccCCCCCCCCCCCH
Q 008383 68 YFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLK---G-SGNF--T--LHGLSVAYLSGRQSSEGQQFGTYSQ 139 (567)
Q Consensus 68 yfv~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg---~-~gv~--~--~~GlrIa~lgG~~~~~~~~~~~~t~ 139 (567)
|++.||||....... .. ......++..++ . .... . ..++.|.+++-.... ...
T Consensus 80 ~~~~GNHD~~~~~~~-~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-------~~~ 140 (223)
T cd00840 80 FIIAGNHDSPSRLGA-LS-----------PLLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-------RLR 140 (223)
T ss_pred EEecCCCCCcccccc-cc-----------chHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-------HHH
Confidence 999999996532111 00 001123444432 1 1111 1 235666655432110 001
Q ss_pred HHHHHHHH--hhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcc
Q 008383 140 DDVDALRA--LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 211 (567)
Q Consensus 140 ~dv~~L~~--~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fy 211 (567)
+..+.+.. ........-||++|....+...... ...+.....+...+..|+++||.|...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~Il~~H~~~~~~~~~~~------------~~~~~~~~~~~~~~~d~v~~GH~H~~~ 202 (223)
T cd00840 141 DLLADAELRPRPLDPDDFNILLLHGGVAGAGPSDS------------ERAPFVPEALLPAGFDYVALGHIHRPQ 202 (223)
T ss_pred HHHHHHHHHhhccCCCCcEEEEEeeeeecCCCCcc------------cccccCcHhhcCcCCCEEECCCcccCe
Confidence 11110111 1123456789999999887642110 112333344556788999999987653
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.37 E-value=8.5e-06 Score=83.16 Aligned_cols=206 Identities=12% Similarity=0.096 Sum_probs=110.9
Q ss_pred CEEEEEcCCCCCH----HHHHHHHHHHHhhcCCCcEEEEecCCCCCCh-------hhHHHHHHHhcccCCCCccEEEEcc
Q 008383 4 PRILLCGDVLGRL----NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-------ELLDEFMNYVEGRSEIPIPTYFIGD 72 (567)
Q Consensus 4 ~KILv~GDvhG~~----~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~-------~~~~~~~~~l~g~~~~p~ptyfv~G 72 (567)
++++++||.-..- ..+.+.+.++.++. +.|+||.+||++-.+. ...+.+.+.+.. ....+|+|.++|
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~-~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~G 78 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAEL-GPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLG 78 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhc-CCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecC
Confidence 4789999988741 34444555555543 5799999999863211 111234444432 225789999999
Q ss_pred CCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEc------CeEEEEEecccCC-CC--------CCCCCC
Q 008383 73 YGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLH------GLSVAYLSGRQSS-EG--------QQFGTY 137 (567)
Q Consensus 73 N~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~------GlrIa~lgG~~~~-~~--------~~~~~~ 137 (567)
|||........+.-... .....+..++.+| .+... +++|.+|--.... .. ......
T Consensus 79 NHD~~~~~~~~~~~~~~----~~~~~~~~~~~~y-----~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~ 149 (277)
T cd07378 79 NHDYSGNVSAQIDYTKR----PNSPRWTMPAYYY-----RVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKL 149 (277)
T ss_pred CcccCCCchheeehhcc----CCCCCccCcchhe-----EEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhh
Confidence 99864221111000000 0001111222111 11222 5788777544221 11 011233
Q ss_pred CHHHHHHHHHh-hcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccc
Q 008383 138 SQDDVDALRAL-AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPY 216 (567)
Q Consensus 138 t~~dv~~L~~~-~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py 216 (567)
.+++++.|.+. .......=|+++|.+|........ ...-...+.+++++.+..++|+||.|.+....
T Consensus 150 ~~~Q~~wL~~~L~~~~~~~~iv~~H~P~~~~~~~~~----------~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~-- 217 (277)
T cd07378 150 AEEQLAWLEKTLAASTADWKIVVGHHPIYSSGEHGP----------TSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIK-- 217 (277)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCccceeCCCCCC----------cHHHHHHHHHHHHHcCCCEEEeCCcccceeee--
Confidence 45666666653 222334569999999875432111 01124567788888899999999988754321
Q ss_pred cCCCCcceeEEEEccCCCC
Q 008383 217 SNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 217 ~~~~~~~~TRFI~L~~~g~ 235 (567)
. ....|++|..|.-+.
T Consensus 218 -~--~~~~~~~i~~G~~~~ 233 (277)
T cd07378 218 -D--DGSGTSFVVSGAGSK 233 (277)
T ss_pred -c--CCCCcEEEEeCCCcc
Confidence 1 124688888875543
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.35 E-value=1e-05 Score=80.83 Aligned_cols=103 Identities=17% Similarity=0.202 Sum_probs=63.1
Q ss_pred EEEEcCCCCCH------HHHHHHHHHHHhhcCCCcEEEEecCCCCC------ChhhHHHHHHHhcccCCCCccEEEEccC
Q 008383 6 ILLCGDVLGRL------NQLFKRVQSVNKSAGPFDAVLCVGQFFPD------SSELLDEFMNYVEGRSEIPIPTYFIGDY 73 (567)
Q Consensus 6 ILv~GDvhG~~------~~l~~kv~~l~~k~GpfD~vi~~GDff~~------~~~~~~~~~~~l~g~~~~p~ptyfv~GN 73 (567)
+++++|+|... +.+++.+..+. ...|+||++||+|.. .....+++.+.+....+.+.|+|+|.||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~---~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GN 77 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEA---RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGN 77 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhh---ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCC
Confidence 37899999542 23444444332 257999999999852 1111223344444335557899999999
Q ss_pred CCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEeccc
Q 008383 74 GVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQ 127 (567)
Q Consensus 74 ~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~ 127 (567)
||.... ..+.. ..++.+|....+++++|.+|..+-|-.
T Consensus 78 HD~~~~--~~~~~--------------~~gi~~l~~~~~~~~~g~~ill~HGd~ 115 (231)
T TIGR01854 78 RDFLIG--KRFAR--------------EAGMTLLPDPSVIDLYGQKVLLMHGDT 115 (231)
T ss_pred Cchhhh--HHHHH--------------HCCCEEECCCEEEEECCEEEEEEcCcc
Confidence 984211 11110 135667766666778999998887763
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.4e-05 Score=81.78 Aligned_cols=71 Identities=17% Similarity=0.114 Sum_probs=45.3
Q ss_pred CCEEEEEcCCCCC----HHHHHHHHHHHHhhcCCCcEEEEecCCCCC-ChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 3 PPRILLCGDVLGR----LNQLFKRVQSVNKSAGPFDAVLCVGQFFPD-SSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 3 ~~KILv~GDvhG~----~~~l~~kv~~l~~k~GpfD~vi~~GDff~~-~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
.+||++++|+|.. ...+-+.++.+++. +.|+|+++||++.. .....+++.+.+..... +.|+|+|.||||-
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~--~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~-~~pv~~V~GNHD~ 124 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQ--KPDLILLGGDYVLFDMPLNFSAFSDVLSPLAE-CAPTFACFGNHDR 124 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhc--CCCEEEEccCcCCCCccccHHHHHHHHHHHhh-cCCEEEecCCCCc
Confidence 4899999999976 33333333344332 57999999999762 11122334444433232 4799999999985
|
|
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.25 E-value=5.7e-05 Score=76.74 Aligned_cols=162 Identities=12% Similarity=0.041 Sum_probs=87.5
Q ss_pred CCcEEEEecCCCCCChh-hHHH----HHHHhcccCCC--CccEEEEccCCCChH------HHHHHHhccccccCcccCCc
Q 008383 32 PFDAVLCVGQFFPDSSE-LLDE----FMNYVEGRSEI--PIPTYFIGDYGVGAA------KVLLAASKNSANQGFKMDGF 98 (567)
Q Consensus 32 pfD~vi~~GDff~~~~~-~~~~----~~~~l~g~~~~--p~ptyfv~GN~~~~~------~~~~~l~~~~~~~~~~~~~~ 98 (567)
+.|+||++||++..+.. ..++ +..+..-.... .+|+|.|+||||..- ..+..+..
T Consensus 45 ~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~------------ 112 (257)
T cd08163 45 KPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVVLPVRQRFEK------------ 112 (257)
T ss_pred CCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCCHHHHHHHHH------------
Confidence 47999999999875432 1122 33333222233 378999999998421 11111110
Q ss_pred eecccEEEeCC-CCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHh-hc-CCCCccEEEeCCCCcccccccc---
Q 008383 99 KVTDNLFWLKG-SGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRAL-AE-EPGIVDLFLTNEWPSGVTNKAA--- 172 (567)
Q Consensus 99 ~i~~Nl~~Lg~-~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~-~~-~~~~vDILLTh~wP~gI~~~~~--- 172 (567)
++|. ..++.++|.+|.+|-+....... ...+.....+.|... .. .....=|||||.|..-..+...
T Consensus 113 -------~Fg~~~~~~~~~~~~fV~Lds~~l~~~~-~~~~~~~~~~~l~~~l~~~~~~~p~ILl~H~Plyr~~~~~cg~~ 184 (257)
T cd08163 113 -------YFGPTSRVIDVGNHTFVILDTISLSNKD-DPDVYQPPREFLHSFSAMKVKSKPRILLTHVPLYRPPNTSCGPL 184 (257)
T ss_pred -------HhCCCceEEEECCEEEEEEccccccCCc-ccccchhHHHHHHhhhhccCCCCcEEEEeccccccCCCCCCCCc
Confidence 1121 13446778888887776322111 122333333334332 21 1234559999999765533111
Q ss_pred -ccc--ccc--ccCC-CCCCcHHHHHHHHHhCCCEEEEccCCCcccc
Q 008383 173 -ASD--MLV--GISD-SSNTDSTVSELVAEIKPRYHIAGSKGVFYAR 213 (567)
Q Consensus 173 -~~~--~~~--~~~~-~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr 213 (567)
... .+. +..- ..+..+.-.+|++++||+..|+||.|.|.+-
T Consensus 185 re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 185 RESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred cccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 000 111 1111 1345567779999999999999998887773
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=98.19 E-value=4e-06 Score=84.01 Aligned_cols=78 Identities=10% Similarity=0.115 Sum_probs=54.6
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHH
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLA 83 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~ 83 (567)
|||+++||+||+++.|.+.++.+....++.|.||++||+..-.+...+.+..++. ....+.+++++.||||. .+++-
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~-~~~~~~~~~~l~GNHE~--~~l~~ 77 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFD-LMSNDDNVVTLLGNHDD--EFYNI 77 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHH-HhhcCCCeEEEECCcHH--HHHHH
Confidence 6899999999999988877887765444679999999997654332333333322 12335679999999983 45554
Q ss_pred H
Q 008383 84 A 84 (567)
Q Consensus 84 l 84 (567)
+
T Consensus 78 ~ 78 (235)
T PHA02239 78 M 78 (235)
T ss_pred H
Confidence 4
|
|
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.16 E-value=1e-05 Score=87.01 Aligned_cols=75 Identities=23% Similarity=0.329 Sum_probs=47.8
Q ss_pred CCEEEEEcCCCCCH-----------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChh-------hHHHHHHHhcc-----
Q 008383 3 PPRILLCGDVLGRL-----------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-------LLDEFMNYVEG----- 59 (567)
Q Consensus 3 ~~KILv~GDvhG~~-----------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~-------~~~~~~~~l~g----- 59 (567)
.||||+++|+|-.. ...|+++-.+..+. ..|+||++||+|..... ..+.|.+|.-|
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~-~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~ 81 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQ-DVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCE 81 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHc-CCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccc
Confidence 58999999999421 22344444444333 48999999999985321 12233332111
Q ss_pred ------------------------cCCCCccEEEEccCCCChH
Q 008383 60 ------------------------RSEIPIPTYFIGDYGVGAA 78 (567)
Q Consensus 60 ------------------------~~~~p~ptyfv~GN~~~~~ 78 (567)
...+.+|+|.|.||||++.
T Consensus 82 ~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 82 LEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1136899999999999875
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=3.6e-05 Score=81.41 Aligned_cols=139 Identities=13% Similarity=0.122 Sum_probs=76.2
Q ss_pred CEEEEEcCCC-CC----------HHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh----hhHHHHHH-HhcccCCCCccE
Q 008383 4 PRILLCGDVL-GR----------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS----ELLDEFMN-YVEGRSEIPIPT 67 (567)
Q Consensus 4 ~KILv~GDvh-G~----------~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~----~~~~~~~~-~l~g~~~~p~pt 67 (567)
||||.++|+| |. +...++++-.+..+. ..|+||++||+|.... .....+.+ ++.-..+.++|+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~-~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v 79 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAH-GITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITL 79 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHc-CCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeE
Confidence 7999999999 31 334555554444444 4799999999997521 11112222 222224568999
Q ss_pred EEEccCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHH
Q 008383 68 YFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA 147 (567)
Q Consensus 68 yfv~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~ 147 (567)
|+++||||.... ........ ..--...+|+++.+....++++|++|..+. +...++...+..
T Consensus 80 ~~I~GNHD~~~~--~~~~~~~~-----~~ll~~~~~v~v~~~~~~v~i~g~~i~~lP-----------~~~~~~~~~~~~ 141 (340)
T PHA02546 80 HVLVGNHDMYYK--NTIRPNAP-----TELLGQYDNITVIDEPTTVDFDGCSIDLIP-----------WICKENTEEILE 141 (340)
T ss_pred EEEccCCCcccc--cccccCch-----HHHHhhCCCEEEeCCceEEEECCEEEEECC-----------CCCHHHHHHHHH
Confidence 999999984210 00000000 000012367777766555567787766432 223444444333
Q ss_pred hhcCCCCccEEEeCC
Q 008383 148 LAEEPGIVDLFLTNE 162 (567)
Q Consensus 148 ~~~~~~~vDILLTh~ 162 (567)
... .....|||.|.
T Consensus 142 ~l~-~~~~~ill~H~ 155 (340)
T PHA02546 142 FIK-NSKSEYCVGHW 155 (340)
T ss_pred Hhc-cCCCcEEEEee
Confidence 221 24568999994
|
|
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.10 E-value=3.3e-05 Score=75.11 Aligned_cols=72 Identities=14% Similarity=0.018 Sum_probs=47.3
Q ss_pred CCEEEEEcCCCCCHH-----------HHHHHHHHHHhhcCCCcEEEEecCCCCCChh---hHHHHHHHhcccCCCCccEE
Q 008383 3 PPRILLCGDVLGRLN-----------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE---LLDEFMNYVEGRSEIPIPTY 68 (567)
Q Consensus 3 ~~KILv~GDvhG~~~-----------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~---~~~~~~~~l~g~~~~p~pty 68 (567)
.+|||+++|+|-... ...+.++++.++. ++|+||++||++..... ....+..++.-.....+|+|
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAE-KPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhc-CCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 579999999996322 2344454444333 57999999999664222 23344444433344579999
Q ss_pred EEccCCC
Q 008383 69 FIGDYGV 75 (567)
Q Consensus 69 fv~GN~~ 75 (567)
+++||||
T Consensus 81 ~~~GNHD 87 (199)
T cd07383 81 ATFGNHD 87 (199)
T ss_pred EECccCC
Confidence 9999996
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=98.10 E-value=9.9e-05 Score=80.40 Aligned_cols=208 Identities=14% Similarity=0.128 Sum_probs=110.2
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChh--hHHHHHHHhcccCCCCccEEEEccCCCChHH-
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE--LLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK- 79 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~--~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~- 79 (567)
..|++++||.+-. ...-+.++.+++. .+|+||++||+.-.+.. .-+.+.++++. ....+|.+.++||||....
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~--~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~-l~s~~P~m~~~GNHE~~~~~ 214 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKW--DYDVFILPGDLSYANFYQPLWDTFGRLVQP-LASQRPWMVTHGNHELEKIP 214 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhc--CCCEEEEcCccccccchHHHHHHHHHHhhh-HhhcCceEEeCccccccccc
Confidence 4689999998532 1111233444432 58999999999654321 11234444332 2235899999999995310
Q ss_pred -----HHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHH-hhc---
Q 008383 80 -----VLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA-LAE--- 150 (567)
Q Consensus 80 -----~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~-~~~--- 150 (567)
.+..+.. .+. .+........|.+| .+..+|+.|..|+..... ....++.+-|++ |++
T Consensus 215 ~~~~~~f~~y~~-rf~--mP~~~~g~~~~~yY-----Sfd~g~vhfI~Lds~~~~------~~~~~Q~~WLe~dL~~~~r 280 (427)
T PLN02533 215 ILHPEKFTAYNA-RWR--MPFEESGSTSNLYY-----SFNVYGVHIIMLGSYTDF------EPGSEQYQWLENNLKKIDR 280 (427)
T ss_pred cccCcCccchhh-ccc--CCccccCCCCCceE-----EEEECCEEEEEEeCCccc------cCchHHHHHHHHHHHhhcc
Confidence 0000000 000 00000000123332 135678888888653211 112344444543 221
Q ss_pred CCCCccEEEeCCCCccccccccccccccccCCCCCC-cHHHHHHHHHhCCCEEEEccCCCcccc-ccccCC-CCcceeEE
Q 008383 151 EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNT-DSTVSELVAEIKPRYHIAGSKGVFYAR-EPYSNV-DAVHVTRF 227 (567)
Q Consensus 151 ~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~G-s~~i~~l~~~lkPRYhf~Gh~~~fyEr-~Py~~~-~~~~~TRF 227 (567)
...+.-|++.|.||......... . ....+ -..+..|+.+.++.+.|+||.|. ||| .|..+. .....|..
T Consensus 281 ~~~pwiIv~~H~P~y~s~~~~~~----~---~~~~~~r~~le~Ll~~~~VdlvlsGH~H~-YeR~~p~~~~~~~~~gpvy 352 (427)
T PLN02533 281 KTTPWVVAVVHAPWYNSNEAHQG----E---KESVGMKESMETLLYKARVDLVFAGHVHA-YERFDRVYQGKTDKCGPVY 352 (427)
T ss_pred cCCCEEEEEeCCCeeecccccCC----c---chhHHHHHHHHHHHHHhCCcEEEecceec-ccccccccCCccCCCCCEE
Confidence 12356789999999865321000 0 00111 24678899999999999999985 565 343222 12346788
Q ss_pred EEccCCCCc
Q 008383 228 LGLAPVGNK 236 (567)
Q Consensus 228 I~L~~~g~~ 236 (567)
|-.|.-|+.
T Consensus 353 iv~G~gG~~ 361 (427)
T PLN02533 353 ITIGDGGNR 361 (427)
T ss_pred EEeCCCccc
Confidence 888887774
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.6e-05 Score=76.02 Aligned_cols=150 Identities=11% Similarity=0.054 Sum_probs=82.8
Q ss_pred EEEEEcCCCCC-------HHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh--hhHHHHHHHhcccCCCCccEEEEccCCC
Q 008383 5 RILLCGDVLGR-------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS--ELLDEFMNYVEGRSEIPIPTYFIGDYGV 75 (567)
Q Consensus 5 KILv~GDvhG~-------~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~--~~~~~~~~~l~g~~~~p~ptyfv~GN~~ 75 (567)
+|++++|+|-- ++...+++.+...+. +.|+||++||+..... .....+.+.+....+.++|+++++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~-~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEAL-NIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHc-CCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCc
Confidence 79999999952 222333333332222 5799999999976533 2223333444322335799999999997
Q ss_pred ChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHh-hcCCCC
Q 008383 76 GAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRAL-AEEPGI 154 (567)
Q Consensus 76 ~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~-~~~~~~ 154 (567)
.- + +|. +. ...++++.|.+. +.....
T Consensus 81 ~~------~---------------------~ld-~~-------------------------~~~~ql~WL~~~L~~~~~~ 107 (214)
T cd07399 81 LV------L---------------------ALE-FG-------------------------PRDEVLQWANEVLKKHPDR 107 (214)
T ss_pred ch------h---------------------hCC-CC-------------------------CCHHHHHHHHHHHHHCCCC
Confidence 20 0 011 00 013445555542 222222
Q ss_pred ccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCcc
Q 008383 155 VDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFY 211 (567)
Q Consensus 155 vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~fy 211 (567)
-=|+++|.+|..-....+. ..-. .....+...+.+|+++. +.+..|+||.|...
T Consensus 108 ~~iv~~H~p~~~~~~~~~~--~~~~-~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~ 162 (214)
T cd07399 108 PAILTTHAYLNCDDSRPDS--IDYD-SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAG 162 (214)
T ss_pred CEEEEecccccCCCCcCcc--cccc-cccccHHHHHHHHHhCCCCEEEEEccccCCCc
Confidence 3489999998733211110 0000 00124556788888877 68889999987653
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.09 E-value=6.6e-06 Score=84.28 Aligned_cols=68 Identities=15% Similarity=0.208 Sum_probs=50.1
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
|+|+|+||+||+++.|.+.++++.-.. ..|.++++||+..-++... ++.+++ .+.+.++++|.||||.
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~-~~D~li~lGDlVdrGp~s~-~vl~~l---~~l~~~~~~VlGNHD~ 68 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDP-AKDTLWLVGDLVNRGPDSL-EVLRFV---KSLGDSAVTVLGNHDL 68 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCC-CCCEEEEeCCccCCCcCHH-HHHHHH---HhcCCCeEEEecChhH
Confidence 579999999999998887777664222 3699999999987544433 444554 2345578999999984
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.00017 Score=73.16 Aligned_cols=186 Identities=12% Similarity=0.058 Sum_probs=100.2
Q ss_pred EEEEcCCCCCHH---HH--H-H-HHHHHHhhcCCCcEEEEecCCCCCCh-------hhHHHHHHHhc---ccCCC-CccE
Q 008383 6 ILLCGDVLGRLN---QL--F-K-RVQSVNKSAGPFDAVLCVGQFFPDSS-------ELLDEFMNYVE---GRSEI-PIPT 67 (567)
Q Consensus 6 ILv~GDvhG~~~---~l--~-~-kv~~l~~k~GpfD~vi~~GDff~~~~-------~~~~~~~~~l~---g~~~~-p~pt 67 (567)
|+.++|+|-... .. . + .++.+++- +.|+||++||+..... ....++.+|+. ..... +.|+
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~--~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 79 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVI--KPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKW 79 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhh--CCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceE
Confidence 678899996321 11 1 1 12333332 4799999999864311 11222323332 22222 5899
Q ss_pred EEEccCCCChHH-----HHHHHhccccccCcccCCceecccEEEeCCCCeEE--EcCeEEEEEecccCCCCC----CCCC
Q 008383 68 YFIGDYGVGAAK-----VLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT--LHGLSVAYLSGRQSSEGQ----QFGT 136 (567)
Q Consensus 68 yfv~GN~~~~~~-----~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~--~~GlrIa~lgG~~~~~~~----~~~~ 136 (567)
|.++||||.... ....... ..+....+.-. -.++ .+++.|.+|......... ..+.
T Consensus 80 ~~v~GNHD~~~~~~~~~~~~~~~~--------y~~~~~~~~~~-----~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~ 146 (256)
T cd07401 80 FDIRGNHDLFNIPSLDSENNYYRK--------YSATGRDGSFS-----FSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGS 146 (256)
T ss_pred EEeCCCCCcCCCCCccchhhHHHH--------hheecCCCccc-----eEEEecCCCEEEEEEcCccCCCCCCCCceecc
Confidence 999999985210 0000000 00000001000 1111 368899888876432111 1245
Q ss_pred CCHHHHHHHHH-hhcC-CCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcccc-
Q 008383 137 YSQDDVDALRA-LAEE-PGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAR- 213 (567)
Q Consensus 137 ~t~~dv~~L~~-~~~~-~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr- 213 (567)
+++++++.|++ +... ..+.-|+++|.|+....... ...+.. +.+++++.++.+.||||.|.. ++
T Consensus 147 l~~~ql~wL~~~L~~~~~~~~~IV~~HhP~~~~~~~~-----------~~~~~~-~~~ll~~~~v~~vl~GH~H~~-~~~ 213 (256)
T cd07401 147 LDKKLLDRLEKELEKSTNSNYTIWFGHYPTSTIISPS-----------AKSSSK-FKDLLKKYNVTAYLCGHLHPL-GGL 213 (256)
T ss_pred CCHHHHHHHHHHHHhcccCCeEEEEEcccchhccCCC-----------cchhHH-HHHHHHhcCCcEEEeCCccCC-Ccc
Confidence 67888888765 3222 23567999999985432110 112233 888899999999999998864 44
Q ss_pred ccccCC
Q 008383 214 EPYSNV 219 (567)
Q Consensus 214 ~Py~~~ 219 (567)
.|.-+.
T Consensus 214 ~p~h~~ 219 (256)
T cd07401 214 EPVHYA 219 (256)
T ss_pred eeeeec
Confidence 776554
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.06 E-value=5.5e-05 Score=84.05 Aligned_cols=117 Identities=15% Similarity=0.200 Sum_probs=67.2
Q ss_pred CCEEEEEcCCC-CCH---HHHHHHH-HHHHhh-------cCCCcEEEEecCCCCCC-----h----------hhHHHHHH
Q 008383 3 PPRILLCGDVL-GRL---NQLFKRV-QSVNKS-------AGPFDAVLCVGQFFPDS-----S----------ELLDEFMN 55 (567)
Q Consensus 3 ~~KILv~GDvh-G~~---~~l~~kv-~~l~~k-------~GpfD~vi~~GDff~~~-----~----------~~~~~~~~ 55 (567)
.++|++++|+| |.- ...+.++ +-++.. ....|.+|++||++... . .....+.+
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 47899999999 542 1222222 222311 22479999999998631 0 01124555
Q ss_pred HhcccCCCCccEEEEccCCCChHHHHHHHhccccccCcccC-Cceec-ccEEEeCCCCeEEEcCeEEEEEeccc
Q 008383 56 YVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMD-GFKVT-DNLFWLKGSGNFTLHGLSVAYLSGRQ 127 (567)
Q Consensus 56 ~l~g~~~~p~ptyfv~GN~~~~~~~~~~l~~~~~~~~~~~~-~~~i~-~Nl~~Lg~~gv~~~~GlrIa~lgG~~ 127 (567)
++... ...+|+++++||||..... ++.... ... ...+. .|+.+|..-..++++|.+|.+..|..
T Consensus 323 ~L~~L-~~~i~V~~ipGNHD~~~~~---lPQ~~l----~~~l~~~l~~~~v~~lsNP~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 323 YLKQI-PEDIKIIISPGNHDAVRQA---EPQPAF----PEEIRSLFPEHNVTFVSNPALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHhh-hcCCeEEEecCCCcchhhc---cCCCCc----cHHHHHhcCcCCeEEecCCeEEEECCEEEEEECCCC
Confidence 55432 2358999999999843210 110000 000 00012 58888887666688999999999974
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.9e-05 Score=79.41 Aligned_cols=108 Identities=15% Similarity=0.231 Sum_probs=62.2
Q ss_pred EEEcCCC--CCH--HHHHHHHHH-HHhhc---CCCcEEEEecCCCCCCh---------------hhHHHHHHHhcccCCC
Q 008383 7 LLCGDVL--GRL--NQLFKRVQS-VNKSA---GPFDAVLCVGQFFPDSS---------------ELLDEFMNYVEGRSEI 63 (567)
Q Consensus 7 Lv~GDvh--G~~--~~l~~kv~~-l~~k~---GpfD~vi~~GDff~~~~---------------~~~~~~~~~l~g~~~~ 63 (567)
++++|+| +.. ...+..+.+ ++... -..|+||++||++.... +....+.+++.... .
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-~ 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-S 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc-c
Confidence 6889999 321 122222222 22211 14799999999986410 11223555554322 3
Q ss_pred CccEEEEccCCCChHHHH------HHHhccccccCcccCCcee-cccEEEeCCCCeEEEcCeEEEEEeccc
Q 008383 64 PIPTYFIGDYGVGAAKVL------LAASKNSANQGFKMDGFKV-TDNLFWLKGSGNFTLHGLSVAYLSGRQ 127 (567)
Q Consensus 64 p~ptyfv~GN~~~~~~~~------~~l~~~~~~~~~~~~~~~i-~~Nl~~Lg~~gv~~~~GlrIa~lgG~~ 127 (567)
.+|+|+++||||.....+ ..+. . .+ ..|+.++.....++++|.+|.+..|..
T Consensus 81 ~~~v~~ipGNHD~~~~~~pq~~l~~~l~-----------~-~~~~~~v~~l~Np~~~~~~g~~i~~~~G~~ 139 (243)
T cd07386 81 HIKIIIIPGNHDAVRQAEPQPALPEEIR-----------K-LFLPGNVEFVSNPALVKIHGVDVLIYHGRS 139 (243)
T ss_pred CCeEEEeCCCCCcccccCCCCCccHHHH-----------h-hcCCCceEEeCCCCEEEECCEEEEEECCCC
Confidence 589999999998532110 1110 0 01 357888876666688999999888864
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00057 Score=70.05 Aligned_cols=209 Identities=11% Similarity=0.034 Sum_probs=109.8
Q ss_pred CEEEEEcCCCCCH----------------HHHHHHHHHHHhhcCCCcEEEE-ecCCCCCChh--hH-----HHHHHHhcc
Q 008383 4 PRILLCGDVLGRL----------------NQLFKRVQSVNKSAGPFDAVLC-VGQFFPDSSE--LL-----DEFMNYVEG 59 (567)
Q Consensus 4 ~KILv~GDvhG~~----------------~~l~~kv~~l~~k~GpfD~vi~-~GDff~~~~~--~~-----~~~~~~l~g 59 (567)
.+||.++|+||.+ ..+...++++.+++ .|+|++ +||++..... .. ..-...+..
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~--~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ 78 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAEN--PNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAA 78 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcC--CCeEEEeCCccCCccHHHHHhhhcccCCCChHHHH
Confidence 4799999999987 33445555555443 377776 9999864321 00 000111111
Q ss_pred cCCCCccEEEEccCCCChH--HHH-HHHhccccccCcccCCceecccEEEeC-------CCCeEEEc-CeEEEEEecccC
Q 008383 60 RSEIPIPTYFIGDYGVGAA--KVL-LAASKNSANQGFKMDGFKVTDNLFWLK-------GSGNFTLH-GLSVAYLSGRQS 128 (567)
Q Consensus 60 ~~~~p~ptyfv~GN~~~~~--~~~-~~l~~~~~~~~~~~~~~~i~~Nl~~Lg-------~~gv~~~~-GlrIa~lgG~~~ 128 (567)
...+.. .+++.||||... +.+ +.+.. .+...++.|+.+.. ..-|++++ |+|||.+|-...
T Consensus 79 ln~~g~-d~~~lGNHe~d~g~~~l~~~~~~--------~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~ 149 (277)
T cd07410 79 MNALGY-DAGTLGNHEFNYGLDYLDKVIKQ--------ANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTP 149 (277)
T ss_pred HHhcCC-CEEeecccCcccCHHHHHHHHHh--------CCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCc
Confidence 234444 477789999652 222 22221 22346788888764 22355689 999999986633
Q ss_pred CCCC-----C--CCCCCH--HHHHH-HHHhhcCCCCcc--EEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHH
Q 008383 129 SEGQ-----Q--FGTYSQ--DDVDA-LRALAEEPGIVD--LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAE 196 (567)
Q Consensus 129 ~~~~-----~--~~~~t~--~dv~~-L~~~~~~~~~vD--ILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~ 196 (567)
.... . ...|+. +.+++ +..+.. .++| |+|+|.--..-.. + .........+|+++
T Consensus 150 ~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~--~~~D~IIvl~H~g~~~~~~-------~-----~~~~~~~~~~la~~ 215 (277)
T cd07410 150 QIPNWEKPNLIGGLKFTDPVETAKKYVPKLRA--EGADVVVVLAHGGFERDLE-------E-----SLTGENAAYELAEE 215 (277)
T ss_pred ccccccCcccCCCcEEcCHHHHHHHHHHHHHH--cCCCEEEEEecCCcCCCcc-------c-----ccCCccHHHHHHhc
Confidence 2110 0 012221 11222 112211 3455 5677753221100 0 01223344566665
Q ss_pred -hCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCCcccceeEEEeccC
Q 008383 197 -IKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPT 248 (567)
Q Consensus 197 -lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~~K~Kw~yAf~i~ 248 (567)
-..-..|+||.|..+..+ ....|.++.-|..|. ++--++|+
T Consensus 216 ~~~vD~IlgGHsH~~~~~~------~~~~~~v~q~g~~g~-----~vg~l~l~ 257 (277)
T cd07410 216 VPGIDAILTGHQHRRFPGP------TVNGVPVVQPGNWGS-----HLGVIDLT 257 (277)
T ss_pred CCCCcEEEeCCCccccccC------CcCCEEEEcCChhhC-----EEEEEEEE
Confidence 345678899988765421 234578887777665 66665554
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >KOG4359 consensus Protein kinase C inhibitor-like protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.92 E-value=2.2e-05 Score=70.16 Aligned_cols=103 Identities=16% Similarity=0.209 Sum_probs=63.8
Q ss_pred CCCCccccCCCC--CCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCc
Q 008383 388 SKECWFCLSSPS--VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKE 465 (567)
Q Consensus 388 ~~~C~FC~~~~~--~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~g~~ 465 (567)
.+.|.||-.... -.+.+..-+.+++.++-++.|-..-|-|+||++|+.+..+|..+...=+++.++.=+..|.....
T Consensus 30 ~~~C~FCDia~r~~~~~ell~~En~~~V~fkDikPaA~~HYLvipK~Hi~~~~~L~k~~V~Lve~m~~~G~~~l~r~~~- 108 (166)
T KOG4359|consen 30 KSTCVFCDIAGRQDPGTELLHCENEDLVCFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKTILERNNF- 108 (166)
T ss_pred CCceEEEEeecccCCCCceeEecCCcEEEEecCCccccceEEEechHHcCChhhcchhhHHHHHHHHHHHHHHHHHhcc-
Confidence 458999986542 23344444555555556789999999999999999999998766544444343333333333221
Q ss_pred eEEEE-ecCCC------CCeeEEEEeecCcchh
Q 008383 466 AVFFE-WLSKR------GTHANLQAVPIPTSKA 491 (567)
Q Consensus 466 ~v~~E-~~~~~------~~H~hi~~vPvp~~~~ 491 (567)
+++=| +++.. ..|+|+|+|--+.+++
T Consensus 109 td~~~~r~GFHLPPf~SV~HLHlH~I~P~~DMg 141 (166)
T KOG4359|consen 109 TDFTNVRMGFHLPPFCSVSHLHLHVIAPVDDMG 141 (166)
T ss_pred CCchheeEeccCCCcceeeeeeEeeecchHHhc
Confidence 22222 22222 4799999996555654
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.85 E-value=3.5e-05 Score=75.55 Aligned_cols=66 Identities=18% Similarity=0.174 Sum_probs=47.5
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
.||+++||+||++..|.+.++.+..+ ...|.+|++||+..-.... .+..+++. . .++++|.||||.
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~-~~~d~~~~~GD~v~~g~~~-~~~~~~l~---~--~~~~~v~GNhe~ 66 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFD-PARDRLISVGDLIDRGPES-LACLELLL---E--PWFHAVRGNHEQ 66 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCC-CCCCEEEEeCCcccCCCCH-HHHHHHHh---c--CCEEEeECCChH
Confidence 37999999999999887766665432 2479999999997643332 24444542 2 358999999984
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=97.83 E-value=4.8e-05 Score=77.11 Aligned_cols=74 Identities=23% Similarity=0.307 Sum_probs=47.8
Q ss_pred CEEEEEcCCCC-C----------HHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh---hhHHHHHHHhcccCCCC-ccEE
Q 008383 4 PRILLCGDVLG-R----------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS---ELLDEFMNYVEGRSEIP-IPTY 68 (567)
Q Consensus 4 ~KILv~GDvhG-~----------~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~---~~~~~~~~~l~g~~~~p-~pty 68 (567)
||||.++|+|- . ....++++-.+..+. ..|+||++||+|.... .+...+.+++....... +|+|
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~-~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~ 79 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAE-QIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIV 79 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHc-CCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEE
Confidence 79999999993 2 122344444333333 4899999999987532 22223445554434444 9999
Q ss_pred EEccCCCChH
Q 008383 69 FIGDYGVGAA 78 (567)
Q Consensus 69 fv~GN~~~~~ 78 (567)
+|.||||...
T Consensus 80 ~i~GNHD~~~ 89 (253)
T TIGR00619 80 VISGNHDSAQ 89 (253)
T ss_pred EEccCCCChh
Confidence 9999999754
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.82 E-value=3.2e-05 Score=77.41 Aligned_cols=76 Identities=13% Similarity=0.116 Sum_probs=51.7
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhh-------cC-CCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCC
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKS-------AG-PFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGV 75 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k-------~G-pfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~ 75 (567)
|||.|+||+||++.+|-+.++++.-. .+ +.|.+|++||+..-+.. ..+..+++.... .+-.+++|-||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~-s~evl~~l~~l~-~~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPD-SPEVLRLVMSMV-AAGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCC-HHHHHHHHHHHh-hCCcEEEEECCcH
Confidence 68999999999999998888877321 11 36999999999875443 234444542211 1235889999998
Q ss_pred ChHHHHHH
Q 008383 76 GAAKVLLA 83 (567)
Q Consensus 76 ~~~~~~~~ 83 (567)
. .++..
T Consensus 79 ~--~l~~~ 84 (234)
T cd07423 79 N--KLYRK 84 (234)
T ss_pred H--HHHHH
Confidence 3 34443
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0039 Score=62.67 Aligned_cols=201 Identities=12% Similarity=0.055 Sum_probs=105.9
Q ss_pred CEEEEEcCCCCCH---------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChhh----HHHHHHHhcccCCCCccEEEE
Q 008383 4 PRILLCGDVLGRL---------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL----LDEFMNYVEGRSEIPIPTYFI 70 (567)
Q Consensus 4 ~KILv~GDvhG~~---------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~----~~~~~~~l~g~~~~p~ptyfv 70 (567)
++|+.++|+||.+ ..+...++++++.+ |=.+++..||++...... ...+.+.+ ..++ ..+++
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~-~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l---~~~g-~d~~~ 75 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAEN-ENTLLLDAGDNFDGSPPSTATKGEANIELM---NALG-YDAVT 75 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcC-CCeEEEeCCccCCCccchhccCCcHHHHHH---HhcC-CCEEe
Confidence 4899999999776 45555566665543 434889999997643210 01122222 3333 46788
Q ss_pred ccCCCChH---HHHHHHhccccccCcccCCceecccEEEeC---------CCCeEEEcCeEEEEEecccCCCCC-----C
Q 008383 71 GDYGVGAA---KVLLAASKNSANQGFKMDGFKVTDNLFWLK---------GSGNFTLHGLSVAYLSGRQSSEGQ-----Q 133 (567)
Q Consensus 71 ~GN~~~~~---~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg---------~~gv~~~~GlrIa~lgG~~~~~~~-----~ 133 (567)
.|||+... .+.+.+.. .+...++.|+.+-+ ..-+++++|+||+.+|-....... .
T Consensus 76 ~GNHe~d~g~~~l~~~~~~--------~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~ 147 (252)
T cd00845 76 IGNHEFDYGLDALAELYKD--------ANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGW 147 (252)
T ss_pred eccccccccHHHHHHHHHh--------CCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCc
Confidence 89999642 12222321 12345677876543 123667899999999876432211 0
Q ss_pred CCCCC-HHHHHHHHH-hhcCCCCcc--EEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHH-hCCCEEEEccCC
Q 008383 134 FGTYS-QDDVDALRA-LAEEPGIVD--LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAE-IKPRYHIAGSKG 208 (567)
Q Consensus 134 ~~~~t-~~dv~~L~~-~~~~~~~vD--ILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~-lkPRYhf~Gh~~ 208 (567)
...+. +...+++.+ ......++| |+|+| ||..- ..++++. -..-..++||.|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~D~vIvl~H-~g~~~----------------------~~~la~~~~giDlvlggH~H 204 (252)
T cd00845 148 IIGLPFEDLAEAVAVAEELLAEGADVIILLSH-LGLDD----------------------DEELAEEVPGIDVILGGHTH 204 (252)
T ss_pred ccCceecCHHHHHHHHHHHHhCCCCEEEEEec-cCccc----------------------hHHHHhcCCCccEEEcCCcC
Confidence 01111 111222221 011124555 45666 54432 1122222 245678899987
Q ss_pred CccccccccCCCCcceeEEEEccCCCCcccceeEEEeccCCC
Q 008383 209 VFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPTPA 250 (567)
Q Consensus 209 ~fyEr~Py~~~~~~~~TRFI~L~~~g~~~K~Kw~yAf~i~p~ 250 (567)
..+... .....|..+--|..+ +++-.+.|+..
T Consensus 205 ~~~~~~-----~~~~~~~v~~~g~~~-----~~~~~~~l~~~ 236 (252)
T cd00845 205 HLLEEP-----EVVNGTLIVQAGKYG-----KYVGEIDLELD 236 (252)
T ss_pred cccCCC-----cccCCEEEEeCChhH-----ceEEEEEEEEE
Confidence 643211 123357777655544 47777777654
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00013 Score=78.84 Aligned_cols=75 Identities=15% Similarity=0.152 Sum_probs=47.7
Q ss_pred CEEEEEcCCCC-C----------HHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh---hhHHHHHHHhcccCCCCccEEE
Q 008383 4 PRILLCGDVLG-R----------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS---ELLDEFMNYVEGRSEIPIPTYF 69 (567)
Q Consensus 4 ~KILv~GDvhG-~----------~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~---~~~~~~~~~l~g~~~~p~ptyf 69 (567)
||||.++|+|- . ...+++++..+-.+. ..|+||++||+|.... .....+.+++......++|+|+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~-~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEH-QVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhc-CCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcEEE
Confidence 79999999993 2 112233333332233 4899999999986421 1112234444444556789999
Q ss_pred EccCCCChHH
Q 008383 70 IGDYGVGAAK 79 (567)
Q Consensus 70 v~GN~~~~~~ 79 (567)
|.||||....
T Consensus 80 I~GNHD~~~~ 89 (407)
T PRK10966 80 LAGNHDSVAT 89 (407)
T ss_pred EcCCCCChhh
Confidence 9999997654
|
|
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=8.7e-05 Score=73.50 Aligned_cols=72 Identities=19% Similarity=0.224 Sum_probs=52.0
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHH
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLA 83 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~ 83 (567)
.||+|+||+||++++|.+.++++..+. ..|.++++||+..-++. ..+..+++. + ...++|.||||. .+++.
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~-~~D~li~lGDlvDrGp~-s~~vl~~l~---~--~~~~~v~GNHE~--~~l~~ 87 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDP-WRDLLISVGDLIDRGPQ-SLRCLQLLE---E--HWVRAVRGNHEQ--MALDA 87 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCc-ccCEEEEcCcccCCCcC-HHHHHHHHH---c--CCceEeeCchHH--HHHHH
Confidence 489999999999999998888875432 36999999999865443 234555653 2 236789999983 34554
Q ss_pred H
Q 008383 84 A 84 (567)
Q Consensus 84 l 84 (567)
+
T Consensus 88 ~ 88 (218)
T PRK11439 88 L 88 (218)
T ss_pred H
Confidence 4
|
|
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00016 Score=77.74 Aligned_cols=73 Identities=21% Similarity=0.236 Sum_probs=49.5
Q ss_pred CEEEEEcCCCCC---------HHHHHH----HHHHHHhhcCCCcEEEEecCCCCCC---hhhHHHHHHHhcccCCCCccE
Q 008383 4 PRILLCGDVLGR---------LNQLFK----RVQSVNKSAGPFDAVLCVGQFFPDS---SELLDEFMNYVEGRSEIPIPT 67 (567)
Q Consensus 4 ~KILv~GDvhG~---------~~~l~~----kv~~l~~k~GpfD~vi~~GDff~~~---~~~~~~~~~~l~g~~~~p~pt 67 (567)
||||.++|+|=. ++..++ .++.+. +. ..|+||++||+|... ..+...+.+.+.......+|+
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~-~~-~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv 78 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAK-EE-KVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPV 78 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHH-Hc-cCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcE
Confidence 799999999954 222222 233222 23 479999999999853 233444555554446678999
Q ss_pred EEEccCCCChH
Q 008383 68 YFIGDYGVGAA 78 (567)
Q Consensus 68 yfv~GN~~~~~ 78 (567)
|.|.||||.+.
T Consensus 79 ~~I~GNHD~~~ 89 (390)
T COG0420 79 VVIAGNHDSPS 89 (390)
T ss_pred EEecCCCCchh
Confidence 99999999764
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00012 Score=74.71 Aligned_cols=68 Identities=18% Similarity=0.197 Sum_probs=49.1
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
|.+.|+||+||++++|.+.++++.-.. .-|.++++||+..-++... +..+++ ...+-.+++|-||||.
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~-~~D~l~~lGDlVdRGP~sl-evL~~l---~~l~~~~~~VlGNHD~ 68 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDP-GQDTLWLTGDLVARGPGSL-EVLRYV---KSLGDAVRLVLGNHDL 68 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCC-CCCEEEEeCCccCCCCCHH-HHHHHH---HhcCCCeEEEEChhHH
Confidence 459999999999999988888775322 3599999999977554433 344454 2333346799999984
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00021 Score=73.34 Aligned_cols=72 Identities=14% Similarity=0.218 Sum_probs=48.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhhc----CCCcEEEEecCCCCCChhhHHHHHHHhcc-cCCCCc-cEEEEccCCCCh
Q 008383 5 RILLCGDVLGRLNQLFKRVQSVNKSA----GPFDAVLCVGQFFPDSSELLDEFMNYVEG-RSEIPI-PTYFIGDYGVGA 77 (567)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~----GpfD~vi~~GDff~~~~~~~~~~~~~l~g-~~~~p~-ptyfv~GN~~~~ 77 (567)
+|+++||+||+++.|-+.++.+.... ...+.+|++||+..-.++. .++.+++.. ...-+. .++|+.||||..
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS-~eVld~L~~l~~~~~~~~vv~LrGNHE~~ 80 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPET-RKVIDFLISLPEKHPKQRHVFLCGNHDFA 80 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCH-HHHHHHHHHhhhcccccceEEEecCChHH
Confidence 69999999999998887777776442 1367899999997644332 233444322 222222 578999999843
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00014 Score=73.83 Aligned_cols=67 Identities=16% Similarity=0.213 Sum_probs=48.3
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 6 ILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 6 ILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
++|+||+||+++.|-+.++++.... ..|.++++||+..-++... +..+++. +..-.+++|.||||..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~-~~D~Li~lGDlVdRGp~s~-evl~~l~---~l~~~v~~VlGNHD~~ 67 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDP-AKDRLWLVGDLVNRGPDSL-ETLRFVK---SLGDSAKTVLGNHDLH 67 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCC-CCCEEEEecCcCCCCcCHH-HHHHHHH---hcCCCeEEEcCCchHH
Confidence 4799999999998887777765332 3699999999977554433 3444542 3334688999999853
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00015 Score=73.15 Aligned_cols=77 Identities=12% Similarity=0.111 Sum_probs=51.1
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhc-------CCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSA-------GPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~-------GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
||+.|+||+||.++.|.+.+++++-.. ..-|.+|++||+..-++... ++.+|+.... .+-.++++-||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~-~vl~~~~~~~-~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSL-RMIEIVWELV-EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChH-HHHHHHHHHh-hCCCEEEEeCccHH
Confidence 689999999999999888887764321 12379999999986544322 3334432211 22368999999973
Q ss_pred hHHHHHHH
Q 008383 77 AAKVLLAA 84 (567)
Q Consensus 77 ~~~~~~~l 84 (567)
.++..+
T Consensus 79 --~~l~~~ 84 (245)
T PRK13625 79 --KLYRFF 84 (245)
T ss_pred --HHHHHH
Confidence 345543
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00017 Score=71.41 Aligned_cols=71 Identities=18% Similarity=0.213 Sum_probs=49.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHHH
Q 008383 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAA 84 (567)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~l 84 (567)
||+|+||+||+++.|.+.++.+.-+. ..|.+||+||+..-++... +..+++. + -.+++|.||||. .++..+
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~-~~d~l~~lGD~vdrG~~~~-~~l~~l~---~--~~~~~v~GNHE~--~~~~~~ 86 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCP-ETDLLISVGDNIDRGPESL-NVLRLLN---Q--PWFISVKGNHEA--MALDAF 86 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCC-CCCEEEECCCCcCCCcCHH-HHHHHHh---h--CCcEEEECchHH--HHHHHH
Confidence 89999999999998887777664222 4799999999977443322 3445542 1 246899999983 344433
|
|
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.016 Score=59.89 Aligned_cols=220 Identities=16% Similarity=0.137 Sum_probs=113.6
Q ss_pred CEEEEEcCCCCCHH--------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChh--hH---HHHHHHhcccCCCC
Q 008383 4 PRILLCGDVLGRLN--------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE--LL---DEFMNYVEGRSEIP 64 (567)
Q Consensus 4 ~KILv~GDvhG~~~--------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~--~~---~~~~~~l~g~~~~p 64 (567)
++||.++|+||++. .+...++++.+++ +-.++|-+||+|..... .. ....+.+ ..++
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~-~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~---n~~g 76 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQN-PNSLFVSAGDLIGASPFESALLQDEPTIEAL---NAMG 76 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcC-CCeEEEeCCcccccccchhhcccCCcHHHHH---HhhC
Confidence 47999999999754 3444455554443 44699999998754211 00 0111222 3444
Q ss_pred ccEEEEccCCCCh---HHHHHHHhccccc-------cCcc-cCCceecccEEEeC-------CCCeEEEcCeEEEEEecc
Q 008383 65 IPTYFIGDYGVGA---AKVLLAASKNSAN-------QGFK-MDGFKVTDNLFWLK-------GSGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 65 ~ptyfv~GN~~~~---~~~~~~l~~~~~~-------~~~~-~~~~~i~~Nl~~Lg-------~~gv~~~~GlrIa~lgG~ 126 (567)
+- +++.||||.. ..+.+.+...... +.|. ..-..++.|+++-. ..-+++.+|+|||.+|=.
T Consensus 77 ~D-a~t~GNHefd~G~~~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~py~i~~~~G~kIgviGl~ 155 (288)
T cd07412 77 VD-ASAVGNHEFDEGYAELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPALPPYTIKDVGGVKVGFIGAV 155 (288)
T ss_pred Ce-eeeecccccccCHHHHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcccCCEEEEEECCEEEEEEeec
Confidence 44 4777999954 2333333210000 0000 11246788887643 234456899999999875
Q ss_pred cCCCCC-------CCCCCCHHHHHHHHH----hhcCCCCccE--EEeCCCCccccccccccccccccCCCCCCcHHHHHH
Q 008383 127 QSSEGQ-------QFGTYSQDDVDALRA----LAEEPGIVDL--FLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSEL 193 (567)
Q Consensus 127 ~~~~~~-------~~~~~t~~dv~~L~~----~~~~~~~vDI--LLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l 193 (567)
.+.... ....|+ +.++++++ +.. .++|+ +|+|.--..-. . +.. .........++
T Consensus 156 ~~~~~~~~~~~~~~g~~f~-d~~e~~~~~v~~lr~--~~~D~IIvL~H~G~~~~~---~----~~~---~~~~~~~~~~l 222 (288)
T cd07412 156 TKDTPNLVSPDGVAGLEFT-DEVEAINAVAPELKA--GGVDAIVVLAHEGGSTKG---G----DDT---CSAASGPIADI 222 (288)
T ss_pred CCCccceeccccccCceEc-CHHHHHHHHHHHHHH--CCCCEEEEEeCCCCCCCC---C----Ccc---ccccChhHHHH
Confidence 321110 011232 12233322 221 35665 66884322110 0 000 00111234566
Q ss_pred HHHhC--CCEEEEccCCCccccccccCCCCcceeEEEEccCCCCcccceeEEEeccCCC
Q 008383 194 VAEIK--PRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPTPA 250 (567)
Q Consensus 194 ~~~lk--PRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~~K~Kw~yAf~i~p~ 250 (567)
+.++. .-..+.||.|..+.. |.. ....|.++.-|..|+ ++--..|.-.
T Consensus 223 ~~~~~~~iD~IlgGHsH~~~~~-~~~---~~~~~~v~q~g~~g~-----~vg~i~l~~~ 272 (288)
T cd07412 223 VNRLDPDVDVVFAGHTHQAYNC-TVP---AGNPRLVTQAGSYGK-----AVADVDLTID 272 (288)
T ss_pred HhhcCCCCCEEEeCccCccccc-ccc---CcCCEEEEecChhhc-----eeEEEEEEEE
Confidence 66654 478999999877653 211 234688888888775 6766666543
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0003 Score=69.88 Aligned_cols=68 Identities=15% Similarity=0.209 Sum_probs=47.0
Q ss_pred EEEcCCCCCHHHHHHHHHHHHhhc------CCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 7 LLCGDVLGRLNQLFKRVQSVNKSA------GPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 7 Lv~GDvhG~~~~l~~kv~~l~~k~------GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
.|+||+||+++.|.+.++++.... .+.|.+|++||+..-++. ..++.+++..... +-.++++-||||.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~-S~~vl~~l~~l~~-~~~~~~l~GNHE~ 75 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPE-IRELLEIVKSMVD-AGHALAVMGNHEF 75 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCC-HHHHHHHHHHhhc-CCCEEEEEccCcH
Confidence 589999999999988888875431 146999999999764433 2234444432221 2368999999984
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00032 Score=69.02 Aligned_cols=69 Identities=13% Similarity=0.186 Sum_probs=46.8
Q ss_pred EEEcCCCCCHHHHHHHHHHHHhh------cCCCcEEEEecCCCCCChhhHHHHHHHhc----ccCCCCccEEEEccCCCC
Q 008383 7 LLCGDVLGRLNQLFKRVQSVNKS------AGPFDAVLCVGQFFPDSSELLDEFMNYVE----GRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 7 Lv~GDvhG~~~~l~~kv~~l~~k------~GpfD~vi~~GDff~~~~~~~~~~~~~l~----g~~~~p~ptyfv~GN~~~ 76 (567)
+|+||+||+++.|.+.++++.-- ..+.|.++++||++.-.+... ++.+++. ...+.+.+++++.||||.
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~-~vl~~l~~l~~~~~~~~~~v~~l~GNHE~ 79 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVI-EILWLLYKLEQEAAKAGGKVHFLLGNHEL 79 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHH-HHHHHHHHHHHHHHhcCCeEEEeeCCCcH
Confidence 48999999999888777655310 125799999999987544322 2223221 122356789999999984
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00032 Score=69.20 Aligned_cols=67 Identities=15% Similarity=0.360 Sum_probs=45.9
Q ss_pred EEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 7 LLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 7 Lv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
.|+||+||+++.|.+.++.+... +-|.+|++||++.-..... ++..++......+.+++++-||||.
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~--~~d~li~lGD~vdrg~~~~-~~l~~l~~~~~~~~~~~~l~GNHe~ 67 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFP--PNDKLIFLGDYVDRGPDSV-EVIDLLLALKILPDNVILLRGNHED 67 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCC--CCCEEEEECCEeCCCCCcH-HHHHHHHHhcCCCCcEEEEccCchh
Confidence 48999999999887666665542 4699999999986543322 2333332112226789999999984
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.002 Score=62.61 Aligned_cols=99 Identities=12% Similarity=0.158 Sum_probs=63.2
Q ss_pred CCcEEEEecCCCCCChh-hHHHHHHHhcccC-----CCCccEEEEccCCCChHHHHHHHhccccccCcccCCceecccEE
Q 008383 32 PFDAVLCVGQFFPDSSE-LLDEFMNYVEGRS-----EIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLF 105 (567)
Q Consensus 32 pfD~vi~~GDff~~~~~-~~~~~~~~l~g~~-----~~p~ptyfv~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~ 105 (567)
+.|+||++||++..+.. ..+++.+++.... .-.+|+|+|+||||- ++
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDI-------------------G~-------- 94 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDI-------------------GG-------- 94 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCc-------------------CC--------
Confidence 57999999999876432 1223444433222 235889999999972 11
Q ss_pred EeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCCCccccccccccccccccCCCCC
Q 008383 106 WLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSN 185 (567)
Q Consensus 106 ~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~ 185 (567)
.+ ...+++.++..++. . |+|||.++...
T Consensus 95 ----~~-----------------------~~~~~~~v~RF~~~---F----i~lsH~P~~~~------------------ 122 (195)
T cd08166 95 ----EE-----------------------EDPIESKIRRFEKY---F----IMLSHVPLLAE------------------ 122 (195)
T ss_pred ----CC-----------------------CCcCHHHHHHHHHh---h----eeeeccccccc------------------
Confidence 00 00123434444432 2 99999987632
Q ss_pred CcHHHHHHHHHhCCCEEEEccCCC
Q 008383 186 TDSTVSELVAEIKPRYHIAGSKGV 209 (567)
Q Consensus 186 Gs~~i~~l~~~lkPRYhf~Gh~~~ 209 (567)
+.+++.+++.+++|...|+||.|.
T Consensus 123 ~~~~~~~~~~~~~p~~Ifs~H~H~ 146 (195)
T cd08166 123 GGQALKHVVTDLDPDLIFSAHRHK 146 (195)
T ss_pred ccHHHHHHHHhcCceEEEEcCccc
Confidence 334889999999999999999764
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0064 Score=61.74 Aligned_cols=179 Identities=14% Similarity=0.118 Sum_probs=90.4
Q ss_pred CEEEEEcCCCCC--H---HHHHH-HHHHHHhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 4 PRILLCGDVLGR--L---NQLFK-RVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 4 ~KILv~GDvhG~--~---~~l~~-kv~~l~~k~GpfD~vi~~GDff~~~~-~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
|||+.++|+|-. . ..++. .++.++ ..++|+||+.||+-.... ..-..+.+++. ....+.|+++++||||.
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~--~~~~D~~v~tGDl~~~~~~~~~~~~~~~l~-~~~~~~~~~~vpGNHD~ 77 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIE--QLKPDLLVVTGDLTNDGEPEEYRRLKELLA-RLELPAPVIVVPGNHDA 77 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHh--cCCCCEEEEccCcCCCCCHHHHHHHHHHHh-hccCCCceEeeCCCCcC
Confidence 689999999976 1 22222 223333 235699999999966532 22234445553 23788999999999996
Q ss_pred hHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhc-CC-C-
Q 008383 77 AAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAE-EP-G- 153 (567)
Q Consensus 77 ~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~-~~-~- 153 (567)
............. ..+-.+... ....+.++.++-=.... ...+.+..+..+.|..... .. .
T Consensus 78 ~~~~~~~~~~~~~-----------~~~~~~~~~---~~~~~~~~~~~d~~~~~--~~~G~~~~~q~~~l~~~l~~~~~~~ 141 (301)
T COG1409 78 RVVNGEAFSDQFF-----------NRYAVLVGA---CSSGGWRVIGLDSSVPG--VPLGRLGAEQLDWLEEALAAAPERA 141 (301)
T ss_pred CchHHHHhhhhhc-----------ccCcceEee---ccCCceEEEEecCCCCC--CCCCEECHHHHHHHHHHHHhCcccc
Confidence 5443332221000 011111100 00023344433211110 1123345666665554321 11 1
Q ss_pred --CccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhC--CCEEEEccCCCc
Q 008383 154 --IVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIK--PRYHIAGSKGVF 210 (567)
Q Consensus 154 --~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lk--PRYhf~Gh~~~f 210 (567)
.+ |+++|.++......... ...........++.... =++.++||.|.-
T Consensus 142 ~~~~-v~~~hh~~~~~~~~~~~--------~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 142 KDTV-VVLHHHPLPSPGTGVDR--------VALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred CceE-EEecCCCCCCCCCccce--------eeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 23 56666555533222111 12344556666677666 789999997643
|
|
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.023 Score=57.85 Aligned_cols=200 Identities=13% Similarity=0.073 Sum_probs=102.8
Q ss_pred CEEEEEcCCCCCHHH----------------------HHHHHHHHHhhcCCCcEEE-EecCCCCCChhh----HHHHHHH
Q 008383 4 PRILLCGDVLGRLNQ----------------------LFKRVQSVNKSAGPFDAVL-CVGQFFPDSSEL----LDEFMNY 56 (567)
Q Consensus 4 ~KILv~GDvhG~~~~----------------------l~~kv~~l~~k~GpfD~vi-~~GDff~~~~~~----~~~~~~~ 56 (567)
..||.++|+||.+.. +...++++.+.. ..|+++ -+||++...... ...+.+.
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~-~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ 79 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAER-NPNTLLLDGGDTWQGSGEALYTRGQAMVDA 79 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhc-CCCeEEEeCCCccCCChHHhhcCChhHHHH
Confidence 369999999997533 233334333331 358775 599998653210 0112222
Q ss_pred hcccCCCCccEEEEccCCCChH---HHHHHHhccccccCcccCCceecccEEEeC-------CCCeEEEcCeEEEEEecc
Q 008383 57 VEGRSEIPIPTYFIGDYGVGAA---KVLLAASKNSANQGFKMDGFKVTDNLFWLK-------GSGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 57 l~g~~~~p~ptyfv~GN~~~~~---~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg-------~~gv~~~~GlrIa~lgG~ 126 (567)
+ .. +..+++.||||... .+...+.. .+-..++.|+.+-. ..-+++.+|+||+.+|-.
T Consensus 80 l---~~--~g~da~~GNHefd~g~~~l~~~~~~--------~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~ 146 (264)
T cd07411 80 L---NA--LGVDAMVGHWEFTYGPERVRELFGR--------LNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQT 146 (264)
T ss_pred H---Hh--hCCeEEecccccccCHHHHHHHHhh--------CCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEec
Confidence 2 33 34444449999652 22222221 12346788887643 123446799999999876
Q ss_pred cCCCCC-----C--CCCCC--HHHHHHH-HHhhcCCCCcc--EEEeCCCCccccccccccccccccCCCCCCcHHHHHHH
Q 008383 127 QSSEGQ-----Q--FGTYS--QDDVDAL-RALAEEPGIVD--LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELV 194 (567)
Q Consensus 127 ~~~~~~-----~--~~~~t--~~dv~~L-~~~~~~~~~vD--ILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~ 194 (567)
...... . ...|+ .+.+.++ ..+.. ..++| |+|+|..-. .-.+++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~iI~l~H~g~~-----------------------~~~~la 202 (264)
T cd07411 147 FPYVPIANPPRFTPGLTFGIREEELQEVVVKLRR-EEGVDVVVLLSHNGLP-----------------------VDVELA 202 (264)
T ss_pred cCCcccccCcCCCCCcEECCHHHHHHHHHHHHHH-hCCCCEEEEEecCCch-----------------------hhHHHH
Confidence 432111 0 01222 2222222 22211 23455 466664321 001233
Q ss_pred HHh-CCCEEEEccCCCccccccccCCCCcceeEEEEccCCCCcccceeEEEeccCCC
Q 008383 195 AEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPTPA 250 (567)
Q Consensus 195 ~~l-kPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~~K~Kw~yAf~i~p~ 250 (567)
+++ ..-..+.||.|..+.. |+. ....|.++.-|..+. ++--++|+..
T Consensus 203 ~~~~~iDlilgGH~H~~~~~-~~~---~~~~t~v~~~g~~~~-----~vg~i~l~~~ 250 (264)
T cd07411 203 ERVPGIDVILSGHTHERTPK-PII---AGGGTLVVEAGSHGK-----FLGRLDLDVR 250 (264)
T ss_pred hcCCCCcEEEeCcccccccC-ccc---ccCCEEEEEcCcccc-----EEEEEEEEEE
Confidence 332 2456889998865432 321 234588888887665 7777777643
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0059 Score=57.76 Aligned_cols=149 Identities=17% Similarity=0.183 Sum_probs=92.0
Q ss_pred HHhhcCCCcEEEEecCC-CCCC-hhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHHHhccccccCcccCCceeccc
Q 008383 26 VNKSAGPFDAVLCVGQF-FPDS-SELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDN 103 (567)
Q Consensus 26 l~~k~GpfD~vi~~GDf-f~~~-~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~N 103 (567)
+..+-.|-|.|++.||+ .+.+ +++.++| .++ ..+|-.-|.+-|||+---.-..+|. ..+.+-
T Consensus 37 W~~~v~~eDiVllpGDiSWaM~l~ea~~Dl-~~i---~~LPG~K~m~rGNHDYWw~s~skl~------------n~lp~~ 100 (230)
T COG1768 37 WRSKVSPEDIVLLPGDISWAMRLEEAEEDL-RFI---GDLPGTKYMIRGNHDYWWSSISKLN------------NALPPI 100 (230)
T ss_pred HHhcCChhhEEEecccchhheechhhhhhh-hhh---hcCCCcEEEEecCCccccchHHHHH------------hhcCch
Confidence 33444478999999998 3321 2222233 333 5678889999999984433333332 124566
Q ss_pred EEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHH-------H--hhcCCCCcc--EEEeCCCCcccccccc
Q 008383 104 LFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALR-------A--LAEEPGIVD--LFLTNEWPSGVTNKAA 172 (567)
Q Consensus 104 l~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~-------~--~~~~~~~vD--ILLTh~wP~gI~~~~~ 172 (567)
++||++ |+ .+..+-|+|.-|-.+++.. +..||++|-+.+. . ++....+++ |+.||-+|..=.
T Consensus 101 l~~~n~-~f-~l~n~aI~G~RgW~s~~~~-~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~---- 173 (230)
T COG1768 101 LFYLNN-GF-ELLNYAIVGVRGWDSPSFD-SEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPPFSDD---- 173 (230)
T ss_pred Hhhhcc-ce-eEeeEEEEEeecccCCCCC-cCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCC----
Confidence 888885 43 5555777777776555432 4568888765422 1 122334444 788999987321
Q ss_pred ccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCC
Q 008383 173 ASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGV 209 (567)
Q Consensus 173 ~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~ 209 (567)
..++ .+.+++++.|+...+.||.|.
T Consensus 174 -----------~t~~-~~sevlee~rv~~~lyGHlHg 198 (230)
T COG1768 174 -----------GTPG-PFSEVLEEGRVSKCLYGHLHG 198 (230)
T ss_pred -----------CCCc-chHHHHhhcceeeEEeeeccC
Confidence 1122 477889999999999999763
|
|
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.036 Score=56.26 Aligned_cols=112 Identities=14% Similarity=0.063 Sum_probs=66.9
Q ss_pred CEEEEEcCCCC----------CHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChh----hHHHHHHHhcccCCCCccEEE
Q 008383 4 PRILLCGDVLG----------RLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----LLDEFMNYVEGRSEIPIPTYF 69 (567)
Q Consensus 4 ~KILv~GDvhG----------~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~----~~~~~~~~l~g~~~~p~ptyf 69 (567)
.+||.+.|+|+ .+..+...++++.+.+ |-.++|.+||++..... ..+.+.+.+ ..++. .+.
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~-~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l---~~l~~-d~~ 75 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKEN-PNTLVLFSGDVLSPSLLSTATKGKQMVPVL---NALGV-DLA 75 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcC-CCEEEEECCCccCCccchhhcCCccHHHHH---HhcCC-cEE
Confidence 36899999993 3566666666666543 43499999999864311 001222232 33333 477
Q ss_pred EccCCCChH--H-HHHHHhccccccCcccCCceecccEEEeCC---------CCeEEEcCeEEEEEecccC
Q 008383 70 IGDYGVGAA--K-VLLAASKNSANQGFKMDGFKVTDNLFWLKG---------SGNFTLHGLSVAYLSGRQS 128 (567)
Q Consensus 70 v~GN~~~~~--~-~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~---------~gv~~~~GlrIa~lgG~~~ 128 (567)
+.||||... + +...+.. .+...++.|+.+-.. .-+++.+|+||+.+|=..+
T Consensus 76 ~~GNHefd~g~~~l~~~~~~--------~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~ 138 (257)
T cd07406 76 CFGNHEFDFGEDQLQKRLGE--------SKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEE 138 (257)
T ss_pred eecccccccCHHHHHHHHhh--------CCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecc
Confidence 899999642 2 2222221 123467888876442 3455679999999986643
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0056 Score=62.09 Aligned_cols=110 Identities=14% Similarity=0.052 Sum_probs=65.3
Q ss_pred CEEEEEcCCCCCH----------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChhh----HHHHHHHhcccCCCCccEEE
Q 008383 4 PRILLCGDVLGRL----------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL----LDEFMNYVEGRSEIPIPTYF 69 (567)
Q Consensus 4 ~KILv~GDvhG~~----------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~----~~~~~~~l~g~~~~p~ptyf 69 (567)
++||.++|+||.+ ..+...++++.++ +-+++|-+||++...... ...+.+.+ ..+++. ++
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~--~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l---n~~g~d-~~ 74 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL--DNDLLVDAGDAIQGLPISDLDKGETIIKIM---NAVGYD-AV 74 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhc--CCEEEEeCCCcCCCchhhhhcCCcHHHHHH---HhcCCc-EE
Confidence 4799999999975 3344444444443 468999999998753210 01122222 334444 46
Q ss_pred EccCCCChH--H-HHHHHhccccccCcccCCceecccEEEeC-------CCCeEEEc-CeEEEEEeccc
Q 008383 70 IGDYGVGAA--K-VLLAASKNSANQGFKMDGFKVTDNLFWLK-------GSGNFTLH-GLSVAYLSGRQ 127 (567)
Q Consensus 70 v~GN~~~~~--~-~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg-------~~gv~~~~-GlrIa~lgG~~ 127 (567)
+.||||... + +.+.+.. .+-..++.|+.... ..-+++.+ |+|||.+|-..
T Consensus 75 ~~GNHefd~G~~~l~~~~~~--------~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~ 135 (257)
T cd07408 75 TPGNHEFDYGLDRLKELSKE--------ADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTT 135 (257)
T ss_pred ccccccccCCHHHHHHHHhh--------CCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecC
Confidence 679999641 2 2222221 12346888887653 12344677 99999998663
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.038 Score=67.73 Aligned_cols=204 Identities=15% Similarity=0.099 Sum_probs=104.8
Q ss_pred CCEEEEEcCCCCCH---HHHHHHHHHHHhhcCCCcEEEE-ecCCCCCChhh----HHHHHHHhcccCCCCccEEEEccCC
Q 008383 3 PPRILLCGDVLGRL---NQLFKRVQSVNKSAGPFDAVLC-VGQFFPDSSEL----LDEFMNYVEGRSEIPIPTYFIGDYG 74 (567)
Q Consensus 3 ~~KILv~GDvhG~~---~~l~~kv~~l~~k~GpfD~vi~-~GDff~~~~~~----~~~~~~~l~g~~~~p~ptyfv~GN~ 74 (567)
.++||.++|+||.+ ..+...++++.+++ .|+|++ +||+|...... -....+.+ ..+.+ -+++.|||
T Consensus 660 ~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~--~~~l~ld~GD~~~gs~~~~~~~g~~~~~~l---n~lg~-d~~~~GNH 733 (1163)
T PRK09419 660 ELTILHTNDFHGHLDGAAKRVTKIKEVKEEN--PNTILVDAGDVYQGSLYSNLLKGLPVLKMM---KEMGY-DASTFGNH 733 (1163)
T ss_pred EEEEEEEeecccCCCCHHHHHHHHHHHHhhC--CCeEEEecCCCCCCcchhhhcCChHHHHHH---hCcCC-CEEEeccc
Confidence 37899999999874 55555566655443 377766 99998653210 01122222 23333 36689999
Q ss_pred CCh---HHHHHHHhccc---cccCcc-cCCceecccEEEeC---------CCCeEEEcCeEEEEEecccCC-CCC-----
Q 008383 75 VGA---AKVLLAASKNS---ANQGFK-MDGFKVTDNLFWLK---------GSGNFTLHGLSVAYLSGRQSS-EGQ----- 132 (567)
Q Consensus 75 ~~~---~~~~~~l~~~~---~~~~~~-~~~~~i~~Nl~~Lg---------~~gv~~~~GlrIa~lgG~~~~-~~~----- 132 (567)
|.. ..+...+.... ....|. ..-..++.|+++-. ..-|++.+|+|||.+|=.... ...
T Consensus 734 Efd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~p~~ 813 (1163)
T PRK09419 734 EFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTSPGN 813 (1163)
T ss_pred ccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccCCCC
Confidence 943 23333332110 000000 01246888887532 234446799999999866321 110
Q ss_pred -CCCCCCHHHHHHHHHhh---cCCCCcc--EEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEc
Q 008383 133 -QFGTYSQDDVDALRALA---EEPGIVD--LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAG 205 (567)
Q Consensus 133 -~~~~~t~~dv~~L~~~~---~~~~~vD--ILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~G 205 (567)
....|+ +.++++++.. ....++| |+|||.--.. +. ..+.-.+.+|++++ .--..+.|
T Consensus 814 ~~~l~f~-d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~-----d~----------~~~~~~~~~lA~~v~gIDvIigG 877 (1163)
T PRK09419 814 VKNLEFK-DPAEAAKKWVKELKEKEKVDAIIALTHLGSNQ-----DR----------TTGEITGLELAKKVKGVDAIISA 877 (1163)
T ss_pred cCCcEEc-CHHHHHHHHHHHHHhhcCCCEEEEEecCCccc-----cc----------cccccHHHHHHHhCCCCCEEEeC
Confidence 012333 2233332211 1124566 5788864321 10 01122345666655 34578899
Q ss_pred cCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 206 SKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 206 h~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
|.|..+... ...|-.+.-+.+|.
T Consensus 878 HsH~~~~~~-------v~~~~ivqag~~g~ 900 (1163)
T PRK09419 878 HTHTLVDKV-------VNGTPVVQAYKYGR 900 (1163)
T ss_pred CCCcccccc-------CCCEEEEeCChhHc
Confidence 988765421 23466666665554
|
|
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.084 Score=54.48 Aligned_cols=112 Identities=18% Similarity=0.118 Sum_probs=62.3
Q ss_pred CEEEEEcCCCCCHHH----------HHHHHHHHHhh---cCCCcEEEEecCCCCCChh-----hHHHHHHHhcccCCCCc
Q 008383 4 PRILLCGDVLGRLNQ----------LFKRVQSVNKS---AGPFDAVLCVGQFFPDSSE-----LLDEFMNYVEGRSEIPI 65 (567)
Q Consensus 4 ~KILv~GDvhG~~~~----------l~~kv~~l~~k---~GpfD~vi~~GDff~~~~~-----~~~~~~~~l~g~~~~p~ 65 (567)
+.||.++|+||++.. +-..++++.++ .++--++|-+||++..... ....+ +.+ ..+.+
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~-~~~---n~~g~ 76 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDF-RGM---NLVGY 76 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHH-HHH---HhhCC
Confidence 469999999997532 22333333222 2455799999998754211 00111 111 33444
Q ss_pred cEEEEccCCCChH--HHHHHHhccccccCcccCCceecccEEEeC------CCCeEEEcCeEEEEEeccc
Q 008383 66 PTYFIGDYGVGAA--KVLLAASKNSANQGFKMDGFKVTDNLFWLK------GSGNFTLHGLSVAYLSGRQ 127 (567)
Q Consensus 66 ptyfv~GN~~~~~--~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg------~~gv~~~~GlrIa~lgG~~ 127 (567)
-.. +.||||..- +.+..+... ..-..++.|+++-. ..-+++.+|+|||.+|=..
T Consensus 77 Da~-~~GNHEfD~G~~~L~~~~~~-------~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~ 138 (285)
T cd07405 77 DAM-AVGNHEFDNPLEVLRQQMKW-------ANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTT 138 (285)
T ss_pred cEE-eecccccccCHHHHHHHHhh-------CCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecc
Confidence 444 558999752 222222111 12346888987652 1234467999999998664
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0036 Score=61.23 Aligned_cols=42 Identities=14% Similarity=0.062 Sum_probs=30.2
Q ss_pred CCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCC
Q 008383 185 NTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPV 233 (567)
Q Consensus 185 ~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~ 233 (567)
.....+.+++...++.+.++||.|..+... ...+.++|+|.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~-------~~~~~~~n~G~W 217 (217)
T cd07398 176 VFEEAVARLARRKGVDGVICGHTHRPALHE-------LDGKLYINLGDW 217 (217)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCeEE-------ECCEEEEECCCC
Confidence 455567788889999999999987653322 224788888863
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.013 Score=66.10 Aligned_cols=36 Identities=8% Similarity=0.074 Sum_probs=28.8
Q ss_pred ecCCCCCCCeEE-EEeccccCCCCCCCHHHHHHHHHH
Q 008383 416 LPKGPLVEDHVL-VIPVEHVPNTISTSPECEKELGRF 451 (567)
Q Consensus 416 l~kgpl~~gH~L-IiP~~H~~s~~~~~~~~~~E~~~~ 451 (567)
+++|+++-+.++ |.|..=.....+++-..+.++...
T Consensus 409 i~~G~IT~~di~~v~PF~N~l~v~~ltG~~Lk~~LE~ 445 (550)
T TIGR01530 409 ILPGEITFNDAYTFLPFGNTLVLVDMEGAELKQIIED 445 (550)
T ss_pred CCCCCcCHHHhheeCCcCceEEEEEecHHHHHHHHHH
Confidence 468999999877 889888888888888777776654
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0025 Score=66.66 Aligned_cols=73 Identities=15% Similarity=0.230 Sum_probs=49.1
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.++.|+||+||++..|..-++...... +-+.+|.+||+..-+....+.+.-++.-....|--+|++-||||..
T Consensus 51 ~~~~vvGDiHG~~~dL~~il~~~g~~~-~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~ 123 (321)
T cd07420 51 KQVTICGDLHGKLDDLFLIFYKNGLPS-PENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDH 123 (321)
T ss_pred CCeEEEEeCCCCHHHHHHHHHHcCCCC-ccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhh
Confidence 379999999999999886665432111 1267999999987655444444333332234566689999999964
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.07 Score=57.28 Aligned_cols=214 Identities=12% Similarity=0.048 Sum_probs=108.4
Q ss_pred CCEEEEEcCCCCC---HHHHHHHHHHHHhhcCCCcEEEEecCCCCC------ChhhHHHHHHHhcccC-CCCccEEEEcc
Q 008383 3 PPRILLCGDVLGR---LNQLFKRVQSVNKSAGPFDAVLCVGQFFPD------SSELLDEFMNYVEGRS-EIPIPTYFIGD 72 (567)
Q Consensus 3 ~~KILv~GDvhG~---~~~l~~kv~~l~~k~GpfD~vi~~GDff~~------~~~~~~~~~~~l~g~~-~~p~ptyfv~G 72 (567)
+++.+++||.-+. -..+-+.+.++.++. ++|+||-+||-|.. ++.-...|++.++... .+.+|-|.+.|
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~-~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLG 104 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNE-RVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLG 104 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhC-CCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCC
Confidence 4689999996543 222333444444444 79999999997732 1122234666655432 26789999999
Q ss_pred CCCChHHHHHHHhcc-------------ccccCcccCCceecccEEEeCCCCeE--------EE--cC--eEEEEEeccc
Q 008383 73 YGVGAAKVLLAASKN-------------SANQGFKMDGFKVTDNLFWLKGSGNF--------TL--HG--LSVAYLSGRQ 127 (567)
Q Consensus 73 N~~~~~~~~~~l~~~-------------~~~~~~~~~~~~i~~Nl~~Lg~~gv~--------~~--~G--lrIa~lgG~~ 127 (567)
|||-.-...+.+... +....-.....|.+||-+|--..... ++ .+ +.|.++--.-
T Consensus 105 NHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~~yY~~~~~f~~~~~~~~~~~~~~~~~v~fifiDT~~ 184 (394)
T PTZ00422 105 QADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPNYWYHYFTHFTDTSGPSLLKSGHKDMSVAFIFIDTWI 184 (394)
T ss_pred cccccCCchhhhccccccccccccccccccccccccCCCccCCchhheeeeeeecccccccccccCCCCEEEEEEEECch
Confidence 998422222222100 00000001346788886653110000 00 11 2223222110
Q ss_pred CCCCCCCCCCCHHHHHHHHH-h--hcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEE
Q 008383 128 SSEGQQFGTYSQDDVDALRA-L--AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIA 204 (567)
Q Consensus 128 ~~~~~~~~~~t~~dv~~L~~-~--~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~ 204 (567)
..........++.+.+.|.+ + +....+-=|.+-|.|-.......+. ..=...+..|+++.+-...++
T Consensus 185 l~~~~~~~~~~~~~w~~L~~~L~~a~k~a~WkIVvGHhPIySsG~hg~~----------~~L~~~L~PLL~ky~VdlYis 254 (394)
T PTZ00422 185 LSSSFPYKKVSERAWQDLKATLEYAPKIADYIIVVGDKPIYSSGSSKGD----------SYLSYYLLPLLKDAQVDLYIS 254 (394)
T ss_pred hcccCCccccCHHHHHHHHHHHHhhccCCCeEEEEecCceeecCCCCCC----------HHHHHHHHHHHHHcCcCEEEE
Confidence 00000001123445444443 2 2212334578888888766432211 001236778889999999999
Q ss_pred ccCCCccccccccCCCCcceeEEEEccCCC
Q 008383 205 GSKGVFYAREPYSNVDAVHVTRFLGLAPVG 234 (567)
Q Consensus 205 Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g 234 (567)
||.|.+ |+.. ...|.||.-|.-+
T Consensus 255 GHDH~l-q~i~------~~gt~yIvSGaGs 277 (394)
T PTZ00422 255 GYDRNM-EVLT------DEGTAHINCGSGG 277 (394)
T ss_pred ccccce-EEec------CCCceEEEeCccc
Confidence 998754 5431 2247788777643
|
|
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0034 Score=64.34 Aligned_cols=73 Identities=11% Similarity=0.240 Sum_probs=49.9
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.++|.|+||+||++..+..-++.+.. .+-+-++++||+..-+....+-+.-++.-....|--++++-||||..
T Consensus 27 ~~~i~vvGDiHG~~~~l~~ll~~~~~--~~~~~~vfLGD~VDrG~~s~e~l~~l~~lk~~~p~~v~llrGNHE~~ 99 (271)
T smart00156 27 SAPVTVCGDIHGQFDDLLRLFDLNGP--PPDTNYVFLGDYVDRGPFSIEVILLLFALKILYPNRVVLLRGNHESR 99 (271)
T ss_pred CCCEEEEEeCcCCHHHHHHHHHHcCC--CCCceEEEeCCccCCCCChHHHHHHHHHHHhcCCCCEEEEeccccHH
Confidence 36899999999999988766654432 24689999999977544433333322221234566789999999964
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0035 Score=62.52 Aligned_cols=68 Identities=12% Similarity=0.111 Sum_probs=45.2
Q ss_pred EEEEEcCCC-CC---------------HHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh--hhHHHHHHHhcccCCCCcc
Q 008383 5 RILLCGDVL-GR---------------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS--ELLDEFMNYVEGRSEIPIP 66 (567)
Q Consensus 5 KILv~GDvh-G~---------------~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~--~~~~~~~~~l~g~~~~p~p 66 (567)
+.|+++|+| |. +.++++++.++-++. ++|.||++||++.... ....++.+++. .+..+
T Consensus 16 ~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~-~~d~vIi~GDl~h~~~~~~~~~~~~~~l~---~~~~~ 91 (225)
T TIGR00024 16 DKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKY-GIEALIINGDLKHEFKKGLEWRFIREFIE---VTFRD 91 (225)
T ss_pred CeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhc-CCCEEEEcCccccccCChHHHHHHHHHHH---hcCCc
Confidence 689999999 42 123455555554444 4899999999975321 22335555653 34569
Q ss_pred EEEEccCCCC
Q 008383 67 TYFIGDYGVG 76 (567)
Q Consensus 67 tyfv~GN~~~ 76 (567)
+++|.||||.
T Consensus 92 v~~V~GNHD~ 101 (225)
T TIGR00024 92 LILIRGNHDA 101 (225)
T ss_pred EEEECCCCCC
Confidence 9999999984
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0053 Score=63.99 Aligned_cols=72 Identities=13% Similarity=0.211 Sum_probs=48.8
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.+|.|+||+||++..|.+-+..... .+-|-++++||+..-+....+.+.-++.-....|--++.+-||||..
T Consensus 43 ~~i~ViGDIHG~~~dL~~l~~~~g~--~~~~~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~ 114 (305)
T cd07416 43 APVTVCGDIHGQFYDLLKLFEVGGS--PANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 114 (305)
T ss_pred CCEEEEEeCCCCHHHHHHHHHhcCC--CCCceEEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHH
Confidence 4799999999999988765553321 13589999999976544434333333322244566789999999953
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.079 Score=54.65 Aligned_cols=173 Identities=12% Similarity=0.034 Sum_probs=87.0
Q ss_pred HHHHHHHHhhcCCCcEEEEecCCCCCChhh----------HHHHHHHhcccCCCCccEEEEccCCCChHH----------
Q 008383 20 FKRVQSVNKSAGPFDAVLCVGQFFPDSSEL----------LDEFMNYVEGRSEIPIPTYFIGDYGVGAAK---------- 79 (567)
Q Consensus 20 ~~kv~~l~~k~GpfD~vi~~GDff~~~~~~----------~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~---------- 79 (567)
-+.++.+.+...++|+||+.||+....... ...+.+.+.. .-..+|+|++.||||..+.
T Consensus 56 ~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~pv~~~~GNHD~~p~~~~~~~~~~~ 134 (296)
T cd00842 56 ESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKK-AFPDTPVYPALGNHDSYPVNQFPPNNSPS 134 (296)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHH-hCCCCCEEEcCCCCCCCcccccCCccccc
Confidence 334444544445789999999997653210 1112222211 1246899999999987432
Q ss_pred -HHHHHhccccccCcccCCceeccc--EEEeCCCCeE--E-EcCeEEEEEecccCCCCCC-----CCCCCHHHHHHHHHh
Q 008383 80 -VLLAASKNSANQGFKMDGFKVTDN--LFWLKGSGNF--T-LHGLSVAYLSGRQSSEGQQ-----FGTYSQDDVDALRAL 148 (567)
Q Consensus 80 -~~~~l~~~~~~~~~~~~~~~i~~N--l~~Lg~~gv~--~-~~GlrIa~lgG~~~~~~~~-----~~~~t~~dv~~L~~~ 148 (567)
.++.+... + ..++..+ -.+. +.|-+ . ..|++|.+|.-..-..... ......++++.|++.
T Consensus 135 ~~~~~~~~~-w-------~~~l~~~~~~~~~-~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~ 205 (296)
T cd00842 135 WLYDALAEL-W-------KSWLPEEAEETFK-KGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDE 205 (296)
T ss_pred HHHHHHHHH-H-------HhhcCHHHHHHhh-cceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHH
Confidence 12211100 0 0000000 0011 12323 3 4688888886543211110 011124455555432
Q ss_pred -h--cCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhC--CCEEEEccCCCcccc
Q 008383 149 -A--EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIK--PRYHIAGSKGVFYAR 213 (567)
Q Consensus 149 -~--~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lk--PRYhf~Gh~~~fyEr 213 (567)
. +..+.-=|++.|.+|...... . .......+.+|+++.+ ....|+||.|...-+
T Consensus 206 L~~a~~~~~~v~I~~HiPp~~~~~~-~----------~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 206 LQEAEQAGEKVWIIGHIPPGVNSYD-T----------LENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred HHHHHHCCCeEEEEeccCCCCcccc-c----------chHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 1 112222368899988643210 0 0134667888888887 788999998764333
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.13 Score=57.71 Aligned_cols=214 Identities=14% Similarity=0.087 Sum_probs=116.5
Q ss_pred CCEEEEEcCCCCCHH---------------HHHHHHHHHHhhcCCCcEEEEecCCCCCCh--hh---HHHHHHHhcccCC
Q 008383 3 PPRILLCGDVLGRLN---------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSS--EL---LDEFMNYVEGRSE 62 (567)
Q Consensus 3 ~~KILv~GDvhG~~~---------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~--~~---~~~~~~~l~g~~~ 62 (567)
++.||.+.|+||++. .+...++++.++. +-.++|-+||++.... .. ..-..+.+ ..
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~-~~~llld~GD~~~G~~l~~~~~~g~~~~~~m---N~ 101 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAEN-KNVLLLDAGDLIQGSPLSDYLTKGEPTVDLL---NA 101 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhc-CCeEEEeCCcccCCccccccccCCChHHHHH---hh
Confidence 578999999999998 6666666665554 3578999999866411 00 00111121 23
Q ss_pred CCccEEEEccCCCChHH--HHHHHhccccccCcccCCceecccEEEeC--------CCCeEEEcCeEEEEEecccC--CC
Q 008383 63 IPIPTYFIGDYGVGAAK--VLLAASKNSANQGFKMDGFKVTDNLFWLK--------GSGNFTLHGLSVAYLSGRQS--SE 130 (567)
Q Consensus 63 ~p~ptyfv~GN~~~~~~--~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg--------~~gv~~~~GlrIa~lgG~~~--~~ 130 (567)
++. -+.+.||||.... .+..+... ..-..++.|++.=. ..-|++.+|+|||.+|=.-+ ..
T Consensus 102 m~y-Da~tiGNHEFd~g~~~l~~~~~~-------~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~ 173 (517)
T COG0737 102 LGY-DAMTLGNHEFDYGLEALARLLDE-------AKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPT 173 (517)
T ss_pred cCC-cEEeecccccccCHHHHHHHHhc-------cCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccc
Confidence 333 3566679997632 23333211 12236888887661 23345678999999985521 11
Q ss_pred -CC----CCCCCCHHHHHHHHHhhc-C-CCCcc--EEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCE
Q 008383 131 -GQ----QFGTYSQDDVDALRALAE-E-PGIVD--LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRY 201 (567)
Q Consensus 131 -~~----~~~~~t~~dv~~L~~~~~-~-~~~vD--ILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRY 201 (567)
.. .-..|+ +.++++.+... . ..++| |+|||..-..-...... .+ +...+ .. ..+..
T Consensus 174 ~~~~~~~~~~~f~-d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~--~~--------~~~~~--~~--~~iD~ 238 (517)
T COG0737 174 WEKPNAIEGVTFR-DPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASE--VP--------GDVDV--AV--PGIDL 238 (517)
T ss_pred cccccccCCcEEc-CHHHHHHHHHHHHHhcCCCEEEEEeccCcCcccccccc--cc--------ccccc--cc--cCcce
Confidence 11 012343 33444443220 0 11266 58899655433221110 11 00000 00 33889
Q ss_pred EEEccCCCccccccccCCCCcceeEEEEccCCCCcccceeEEEeccCCC
Q 008383 202 HIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPTPA 250 (567)
Q Consensus 202 hf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~~K~Kw~yAf~i~p~ 250 (567)
.|.||.|..|+..-+. .....|-.+..|.+|. ++.-+.|+-.
T Consensus 239 i~~GH~H~~~~~~~~~--~~~~~t~ivqag~~gk-----~vG~~di~~d 280 (517)
T COG0737 239 IIGGHSHTVFPGGDKP--GTVNGTPIVQAGEYGK-----YVGVLDITFD 280 (517)
T ss_pred EeccCCcccccCCccc--CccCCEEEEccChhhC-----ceeEEEEEEc
Confidence 9999988766654211 1344688888888875 6766666553
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0067 Score=62.86 Aligned_cols=72 Identities=15% Similarity=0.289 Sum_probs=48.5
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.++.|+||+||++..+.+.+..... .+-+-+|++||+..-+....+-+.-++.-....|--++.+-||||..
T Consensus 50 ~~i~viGDIHG~~~~L~~l~~~~~~--~~~~~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~ 121 (293)
T cd07414 50 APLKICGDIHGQYYDLLRLFEYGGF--PPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 121 (293)
T ss_pred CceEEEEecCCCHHHHHHHHHhcCC--CCcceEEEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchh
Confidence 4799999999999988766654322 14578999999977544333333322222234566689999999964
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.1 Score=58.88 Aligned_cols=113 Identities=18% Similarity=0.071 Sum_probs=62.4
Q ss_pred CCEEEEEcCCCCCHHH----------HHHHHHHHHh---hcCCCcEEEEecCCCCCChhh-H---HHHHHHhcccCCCCc
Q 008383 3 PPRILLCGDVLGRLNQ----------LFKRVQSVNK---SAGPFDAVLCVGQFFPDSSEL-L---DEFMNYVEGRSEIPI 65 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~----------l~~kv~~l~~---k~GpfD~vi~~GDff~~~~~~-~---~~~~~~l~g~~~~p~ 65 (567)
++.||.++|+||.+.. +-..++++.+ +.+|=-++|-+||+|...... . .-.-+.+ ..+++
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~m---N~~g~ 110 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGM---NLIGY 110 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHH---hcCCC
Confidence 3679999999998741 1222232222 224446899999998642110 0 0001111 33444
Q ss_pred cEEEEccCCCChHH--HHHHHhccccccCcccCCceecccEEEeC-------CCCeEEEcCeEEEEEecc
Q 008383 66 PTYFIGDYGVGAAK--VLLAASKNSANQGFKMDGFKVTDNLFWLK-------GSGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 66 ptyfv~GN~~~~~~--~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg-------~~gv~~~~GlrIa~lgG~ 126 (567)
- +++.||||..-. .+..+-.. ..-..++.|+++-. ..-+++.+|+|||.+|=.
T Consensus 111 D-a~tlGNHEFD~G~~~L~~~~~~-------a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~ 172 (551)
T PRK09558 111 D-AMAVGNHEFDNPLSVLRKQEKW-------AKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLT 172 (551)
T ss_pred C-EEcccccccCcCHHHHHHhhcc-------CCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEe
Confidence 4 455699996522 22222111 12347888987642 223445789999999865
|
|
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0076 Score=62.22 Aligned_cols=206 Identities=13% Similarity=0.101 Sum_probs=102.3
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHH----
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK---- 79 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~---- 79 (567)
.++.|+||+||++..|..-+..... .+-+-+|++||+..-+....+-+.-++.-....|-.+|++-||||...-
T Consensus 42 ~~i~vvGDIHG~~~dL~~ll~~~~~--~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~y 119 (285)
T cd07415 42 SPVTVCGDIHGQFYDLLELFRVGGD--PPDTNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVY 119 (285)
T ss_pred CCEEEEEeCCCCHHHHHHHHHHcCC--CCCCeEEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhc
Confidence 4689999999999988765554321 1457899999997654443333322222123456679999999996320
Q ss_pred -HHHHHhccccccCcccCC--ceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcC---CC
Q 008383 80 -VLLAASKNSANQGFKMDG--FKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEE---PG 153 (567)
Q Consensus 80 -~~~~l~~~~~~~~~~~~~--~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~---~~ 153 (567)
+..+... .. .... ..+....-+|.=.- .+++ +|..+-|..++... +.++++.+...... .-
T Consensus 120 gf~~e~~~-~y----~~~~l~~~~~~~f~~lPlaa--ii~~-~i~cvHgGi~p~~~-----~~~~i~~i~r~~~~~~~~~ 186 (285)
T cd07415 120 GFYDECLR-KY----GNANVWKYCTDLFDYLPLAA--LIDN-QIFCVHGGLSPSID-----TLDQIRAIDRFQEVPHEGP 186 (285)
T ss_pred chhHHHHH-hc----CchHHHHHHHHHHHHhHHHh--EeCC-eEEEEcCCCCCCcc-----cHHHhhcccCCCCCCCCCC
Confidence 1111100 00 0000 00001111111000 1334 33333333332111 24445554432111 11
Q ss_pred CccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC--CccccccccCCCCcceeEEEEcc
Q 008383 154 IVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG--VFYAREPYSNVDAVHVTRFLGLA 231 (567)
Q Consensus 154 ~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~--~fyEr~Py~~~~~~~~TRFI~L~ 231 (567)
-.|+|-+ +|-.. ..... -+.+.. ...|..++.+.+++..=++.+=||+- ..|+.. + +..-+|-|=+..
T Consensus 187 ~~dllWs-DP~~~-~~~~~---~~Rg~g-~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~-~---~~~~~TvfSa~~ 256 (285)
T cd07415 187 MCDLLWS-DPDDI-EGWGI---SPRGAG-YLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQWM-F---DDKLVTVWSAPN 256 (285)
T ss_pred ccceEec-CCCcc-CCCCc---CCCCCc-cccCHHHHHHHHHHCCCeEEEEcCccccceEEEe-c---CCcEEEEecCCc
Confidence 2455544 22211 11111 112211 34799999999999999999999962 355532 1 135578887665
Q ss_pred CCC
Q 008383 232 PVG 234 (567)
Q Consensus 232 ~~g 234 (567)
-++
T Consensus 257 y~~ 259 (285)
T cd07415 257 YCY 259 (285)
T ss_pred ccC
Confidence 543
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.093 Score=54.00 Aligned_cols=111 Identities=12% Similarity=0.015 Sum_probs=62.9
Q ss_pred CEEEEEcCCCCCH---------------------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChh----hHHHHHHHhc
Q 008383 4 PRILLCGDVLGRL---------------------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----LLDEFMNYVE 58 (567)
Q Consensus 4 ~KILv~GDvhG~~---------------------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~----~~~~~~~~l~ 58 (567)
++||.++|+||++ ..+...++++.+++ +=-+++-+||++..... ......+.+
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~-~~~l~ld~GD~~~gs~~~~~~~g~~~~~~l- 78 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAEN-PNVLFLNAGDAFQGTLWYTLYKGNADAEFM- 78 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcC-CCEEEEeCCCCCCCcchhhhcCChHHHHHH-
Confidence 4799999999865 44555555555443 32355669998764221 011122222
Q ss_pred ccCCCCccEEEEccCCCChH---HHHHHHhccccccCcccCCceecccEEEeCC----------CCeEEEcCeEEEEEec
Q 008383 59 GRSEIPIPTYFIGDYGVGAA---KVLLAASKNSANQGFKMDGFKVTDNLFWLKG----------SGNFTLHGLSVAYLSG 125 (567)
Q Consensus 59 g~~~~p~ptyfv~GN~~~~~---~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~----------~gv~~~~GlrIa~lgG 125 (567)
..+++... +.||||... .+.+.+.. .+...++.|+..-.. .-+++.+|+|||.+|=
T Consensus 79 --n~~g~D~~-~lGNHefd~G~~~l~~~~~~--------~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~ 147 (281)
T cd07409 79 --NLLGYDAM-TLGNHEFDDGVEGLAPFLNN--------LKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGY 147 (281)
T ss_pred --HhcCCCEE-EeccccccCCHHHHHHHHHh--------CCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEE
Confidence 44556544 558999752 12222221 123467778765431 2455689999999986
Q ss_pred cc
Q 008383 126 RQ 127 (567)
Q Consensus 126 ~~ 127 (567)
..
T Consensus 148 ~~ 149 (281)
T cd07409 148 TT 149 (281)
T ss_pred ec
Confidence 53
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.0087 Score=62.26 Aligned_cols=207 Identities=12% Similarity=0.054 Sum_probs=102.9
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHH----
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK---- 79 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~---- 79 (567)
.++.|+||+||++..+...+..+... +-+-+|++||+..-+....+-+.-++.-....|--++++-||||...-
T Consensus 43 ~~i~vvGDIHG~~~~L~~l~~~~~~~--~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~ 120 (303)
T PTZ00239 43 APVNVCGDIHGQFYDLQALFKEGGDI--PNANYIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVY 120 (303)
T ss_pred CCEEEEEeCCCCHHHHHHHHHhcCCC--CCceEEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhc
Confidence 35899999999999888666543321 457899999997654433333333322223446668999999996320
Q ss_pred -HHHHHhccccccCcccCCc--eecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcC---CC
Q 008383 80 -VLLAASKNSANQGFKMDGF--KVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEE---PG 153 (567)
Q Consensus 80 -~~~~l~~~~~~~~~~~~~~--~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~---~~ 153 (567)
+.++... .. ..... .+....-+|.=.- .+++-.++.=||.-+ ... +.++++.+...... ..
T Consensus 121 gf~~e~~~-ky----~~~~~~~~~~~~f~~LPlaa--ii~~~i~cvHgGi~p-~~~-----~l~~i~~i~r~~~~~~~~~ 187 (303)
T PTZ00239 121 GFYEEILR-KY----GNSNPWRLFMDVFDCLPLAA--LIEGQILCVHGGLSP-DMR-----TIDQIRTIDRKIEIPHEGP 187 (303)
T ss_pred ChHHHHHH-Hh----cChhHHHHHHHHHHhCchhe--EEcCeEEEEcCccCc-ccc-----cHhhhccccCCCCCCCCCC
Confidence 1111100 00 00000 0011111222111 234544444444422 111 23444444322111 11
Q ss_pred CccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC--CccccccccCCCCcceeEEEEcc
Q 008383 154 IVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG--VFYAREPYSNVDAVHVTRFLGLA 231 (567)
Q Consensus 154 ~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~--~fyEr~Py~~~~~~~~TRFI~L~ 231 (567)
-.|||-+- |- ....... -+.+. ....|.+++.+.+++.+=++.+=||+- ..|+.. | .+..-+|-|=+..
T Consensus 188 ~~dllWsD-P~-~~~~~~~---~~Rg~-g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~-~--~~~~~iTvfSa~~ 258 (303)
T PTZ00239 188 FCDLMWSD-PE-EVEYWAV---NSRGA-GYLFGAKVTKEFCRLNDLTLICRAHQLVMEGYKYW-F--PDQNLVTVWSAPN 258 (303)
T ss_pred ceeeEecC-cc-ccCCCcc---CCCCC-ccccCHHHHHHHHHHCCCcEEEEcChhhccceEEE-e--CCCeEEEEECCCc
Confidence 24544432 21 1111111 11121 135799999999999999999999962 345431 2 1123578887665
Q ss_pred CCC
Q 008383 232 PVG 234 (567)
Q Consensus 232 ~~g 234 (567)
-++
T Consensus 259 Y~~ 261 (303)
T PTZ00239 259 YCY 261 (303)
T ss_pred ccC
Confidence 443
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0074 Score=62.55 Aligned_cols=206 Identities=13% Similarity=0.135 Sum_probs=101.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHH-----
Q 008383 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK----- 79 (567)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~----- 79 (567)
.+.|+||+||++..|.+-++.+.. .+.+-++++||+..-+....+-+.-++.-....|..++.+-||||...-
T Consensus 53 p~~ViGDIHG~~~~L~~l~~~~~~--~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g 130 (294)
T PTZ00244 53 PVRVCGDTHGQYYDLLRIFEKCGF--PPYSNYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYG 130 (294)
T ss_pred CceeeccCCCCHHHHHHHHHHcCC--CCcccEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccC
Confidence 488999999999988876665432 2567888999997655443333332222123356679999999995310
Q ss_pred HHHHHhccccccCcccCC-ceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCC-C--Cc
Q 008383 80 VLLAASKNSANQGFKMDG-FKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEP-G--IV 155 (567)
Q Consensus 80 ~~~~l~~~~~~~~~~~~~-~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~-~--~v 155 (567)
+.++... .. ...- ..+....-+|.-.- .+++-.+..=||.-+ .. -+.++++.+....... . -.
T Consensus 131 f~~e~~~-~y----~~~l~~~~~~~f~~lPlaa--ii~~~il~vHgGi~p-~~-----~~l~~i~~i~rp~~~~~~~~~~ 197 (294)
T PTZ00244 131 FFDDVKR-RY----NIKLFKAFTDVFNTMPVCC--VISEKIICMHGGLSP-DL-----TSLASVNEIERPCDVPDRGILC 197 (294)
T ss_pred hHHHHHH-Hh----hHHHHHHHHHHHHhCchhe--EecCeeEEEcCCCCc-hh-----hHHHHhhhhccccCCCccchhh
Confidence 0111100 00 0000 00111111111100 123323333334322 10 0233344443211110 1 13
Q ss_pred cEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC--CccccccccCCCCcceeEEEEccCC
Q 008383 156 DLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG--VFYAREPYSNVDAVHVTRFLGLAPV 233 (567)
Q Consensus 156 DILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~--~fyEr~Py~~~~~~~~TRFI~L~~~ 233 (567)
|+|-+- |-..+..... .+.+.. ...|.+++.+.+++..=.+.+=||+- ..|+.. . +..-+|-|=+..-+
T Consensus 198 dllWsD-P~~~~~~~~~---~~Rg~g-~~fg~~~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~---~-~~~~iTvfSa~~Y~ 268 (294)
T PTZ00244 198 DLLWAD-PEDEVRGFLE---SDRGVS-YLFGEDIVNDFLDMVDMDLIVRAHQVMERGYGFF---A-SRQLVTVFSAPNYC 268 (294)
T ss_pred eeeecC-cccccCCCCc---CCCCCc-cccCHHHHHHHHHHcCCcEEEEcCccccCceEEc---C-CCeEEEEeCCcccc
Confidence 544332 2111111111 112211 35799999999999999999999963 345531 2 24668888766655
Q ss_pred C
Q 008383 234 G 234 (567)
Q Consensus 234 g 234 (567)
|
T Consensus 269 ~ 269 (294)
T PTZ00244 269 G 269 (294)
T ss_pred C
Confidence 4
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.01 Score=62.07 Aligned_cols=211 Identities=14% Similarity=0.144 Sum_probs=103.4
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHH
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLA 83 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~ 83 (567)
.+|.|+||+||++..|.+-+...... +-+-+|++||+..-+....+.+.-++.-....|-.++.+-||||.. .+..
T Consensus 59 ~~i~vvGDIHG~~~dL~~l~~~~g~~--~~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~--~~~~ 134 (320)
T PTZ00480 59 APLKICGDVHGQYFDLLRLFEYGGYP--PESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA--SINR 134 (320)
T ss_pred CCeEEEeecccCHHHHHHHHHhcCCC--CcceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchh--hhhh
Confidence 46999999999999887655533221 3578899999976544333333333222244566789999999963 1111
Q ss_pred Hhc--cccccCcccCC-ceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCC---CCccE
Q 008383 84 ASK--NSANQGFKMDG-FKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEP---GIVDL 157 (567)
Q Consensus 84 l~~--~~~~~~~~~~~-~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~---~~vDI 157 (567)
... .+....+...- ..+....-+|.-.- .+++-.+..=||.-+ .-. +-++++.+....... --.|+
T Consensus 135 ~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaA--iI~~~i~cvHGGI~p-~~~-----~l~~i~~i~rp~~~~~~~~~~dl 206 (320)
T PTZ00480 135 IYGFYDECKRRYTIKLWKTFTDCFNCLPVAA--LIDEKILCMHGGLSP-ELS-----NLEQIRRIMRPTDVPDTGLLCDL 206 (320)
T ss_pred hcchHHHHHhhcCHHHHHHHHHHHHhccHhh--eecCcEEEEcCCcCc-ccC-----CHHHHhcccCCCCCCccchhhhe
Confidence 100 00000000000 00001111111111 133433333344422 111 234444433211100 11344
Q ss_pred EEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC--CccccccccCCCCcceeEEEEccCCCC
Q 008383 158 FLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG--VFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 158 LLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~--~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
|-+ +|-..+..... -+.+. ....|.+++.+.+++..=.+.+=||+- ..|+.. . +..-+|-|=+..-+|.
T Consensus 207 lWS-DP~~~~~~~~~---s~RG~-g~~FG~~~~~~Fl~~n~l~~IiR~Hq~v~~G~~~~---~-~~~~iTvFSa~~Y~~~ 277 (320)
T PTZ00480 207 LWS-DPDKDVQGWAD---NERGV-SYVFSQEIVQVFLKKHELDLICRAHQVVEDGYEFF---S-KRQLVTLFSAPNYCGE 277 (320)
T ss_pred eec-CcccccCCCcc---CCCCC-ccccCHHHHHHHHHhCCCcEEEEcCccccCceEEe---C-CCcEEEEeCCcccCCC
Confidence 433 22111211111 11221 134799999999999999999999963 345532 2 2466899987666554
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.074 Score=54.86 Aligned_cols=117 Identities=12% Similarity=-0.018 Sum_probs=62.5
Q ss_pred CCEEEEEcCCCCCHH----------------HHHHHHHHHHhhcCCCcEEEEecCCCCCCh--h----hHHHHHHHhccc
Q 008383 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSS--E----LLDEFMNYVEGR 60 (567)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~--~----~~~~~~~~l~g~ 60 (567)
+++||.++|+||.+. .+.+.+++..++.++--++|-+||++.... . .-.-..+.+
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~m--- 81 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIF--- 81 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHH---
Confidence 578999999999864 333444433233344336677999866321 0 001112222
Q ss_pred CCCCccEEEEccCCCCh--HHHHHHHhccccccCcccCCceecccEEEeCC----------CCeEEEc-CeEEEEEeccc
Q 008383 61 SEIPIPTYFIGDYGVGA--AKVLLAASKNSANQGFKMDGFKVTDNLFWLKG----------SGNFTLH-GLSVAYLSGRQ 127 (567)
Q Consensus 61 ~~~p~ptyfv~GN~~~~--~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~----------~gv~~~~-GlrIa~lgG~~ 127 (567)
..++. =+++.||||.. ...++.+..... ...-..++.|+++-.. .-|++.+ |+|||.+|=..
T Consensus 82 N~mgy-Da~tlGNHEFd~g~~~l~~l~~~~~----~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt 156 (282)
T cd07407 82 RMMPY-DLLTIGNHELYNYEVADDEYEGFVP----SWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLF 156 (282)
T ss_pred HhcCC-cEEeecccccCccccHHHHHHHHHh----hcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEec
Confidence 22323 36788999974 212222211000 0123478899876531 2233555 99999998653
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.01 Score=62.14 Aligned_cols=211 Identities=14% Similarity=0.168 Sum_probs=103.2
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHH
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLA 83 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~ 83 (567)
.++.|+||+||.+..+..-+....-.. +-|-+|.+||+..-+....+-+.-++.-....|--++.+-||||.. .+..
T Consensus 60 ~~~~VvGDIHG~~~dL~~ll~~~g~~~-~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~--~~~~ 136 (316)
T cd07417 60 EKITVCGDTHGQFYDLLNIFELNGLPS-ETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETD--NMNK 136 (316)
T ss_pred ceeEEeecccCCHHHHHHHHHhcCCCC-ccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchH--HHHH
Confidence 469999999999998876554332110 1268999999976544434433333221234456689999999963 2222
Q ss_pred Hhc--cccccCcccCC-ceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCC---CCccE
Q 008383 84 ASK--NSANQGFKMDG-FKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEP---GIVDL 157 (567)
Q Consensus 84 l~~--~~~~~~~~~~~-~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~---~~vDI 157 (567)
... .+....+...- ..+...+-+|.-.- .+++-.+..=||..+.. ..+-++++.+....... --.|+
T Consensus 137 ~~gf~~e~~~k~~~~l~~~~~~~f~~LPlaa--ii~~~~~~vHgGi~~~~-----~~~l~~i~~i~r~~~~~~~~~~~dl 209 (316)
T cd07417 137 MYGFEGEVKAKYNEQMFDLFSEVFNWLPLAH--LINGKVLVVHGGLFSDD-----GVTLDDIRKIDRFRQPPDSGLMCEL 209 (316)
T ss_pred HhhhcchhhhcccHHHHHHHHHHHHhchHhh--eeCCeEEEEccccccCC-----CccHHHhhcccCCCCCCccccceee
Confidence 110 00000000000 00111111222111 23443344344442221 12344455444321110 12344
Q ss_pred EEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC--CccccccccCCCCcceeEEEEccCCC
Q 008383 158 FLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG--VFYAREPYSNVDAVHVTRFLGLAPVG 234 (567)
Q Consensus 158 LLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~--~fyEr~Py~~~~~~~~TRFI~L~~~g 234 (567)
|-+ +|-. ...... -+.+.. ...|.+++.+.+++..=++.+-||+- ..|+.. . +..-+|-|=+..-+|
T Consensus 210 lWs-DP~~-~~~~~~---s~Rg~g-~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~---~-~~~~~TvfSa~~Y~~ 278 (316)
T cd07417 210 LWS-DPQP-QPGRSP---SKRGVG-CQFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVE---H-DGKCITVFSAPNYCD 278 (316)
T ss_pred eec-CCCC-CCCCCc---cCCCCc-eEeCHHHHHHHHHHcCCcEEEECCcccceeEEEe---c-CCeEEEEeCCccccC
Confidence 433 2111 110001 111211 24689999999999999999999963 355542 1 245688887765444
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.014 Score=55.26 Aligned_cols=66 Identities=15% Similarity=0.189 Sum_probs=42.2
Q ss_pred EEEcCCCCCHHHHH--------------H-HHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEc
Q 008383 7 LLCGDVLGRLNQLF--------------K-RVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIG 71 (567)
Q Consensus 7 Lv~GDvhG~~~~l~--------------~-kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~ 71 (567)
.+++|+|=...... + .++.+++.-.+.|.||++||++..... ....+++ .+.+.|+++|.
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~--~~~~~~l---~~~~~~~~~v~ 76 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKA--GTELELL---SRLNGRKHLIK 76 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCCh--HHHHHHH---HhCCCCeEEEe
Confidence 57788886544332 2 245555544467999999999875432 1113333 34567899999
Q ss_pred cCCCCh
Q 008383 72 DYGVGA 77 (567)
Q Consensus 72 GN~~~~ 77 (567)
||||..
T Consensus 77 GNHD~~ 82 (168)
T cd07390 77 GNHDSS 82 (168)
T ss_pred CCCCch
Confidence 999853
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.013 Score=62.41 Aligned_cols=73 Identities=14% Similarity=0.230 Sum_probs=47.1
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.+|.|+||+||.+..|...++...-.. +-+.+|++||+..-+....+-+.-++.-....|--+|.+-||||..
T Consensus 66 ~~i~VvGDIHG~~~dL~~ll~~~g~~~-~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~ 138 (377)
T cd07418 66 CEVVVVGDVHGQLHDVLFLLEDAGFPD-QNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESK 138 (377)
T ss_pred CCEEEEEecCCCHHHHHHHHHHhCCCC-CCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccc
Confidence 468999999999998886655432111 1246899999976444333333322221234566699999999963
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >COG1085 GalT Galactose-1-phosphate uridylyltransferase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.024 Score=59.25 Aligned_cols=98 Identities=21% Similarity=0.270 Sum_probs=72.4
Q ss_pred CCCCccccCCC--CCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhc---
Q 008383 388 SKECWFCLSSP--SVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ--- 462 (567)
Q Consensus 388 ~~~C~FC~~~~--~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~--- 462 (567)
...|.||-.-. .-.+.+||..++++-++.|=...-|-+++|+|++|+..+.++++++.++|-...+.+...|.+.
T Consensus 184 ~~~~~~~~~ve~E~~~~~R~v~e~~~~~a~~Pf~a~~pfEv~i~pk~hv~~l~~~sdee~~~lA~ilk~~~~~y~~~~~~ 263 (338)
T COG1085 184 NGSCMYCDLVEREKGDGERIVVENDHFLAFVPFWARWPFEVLIYPKEHVSFLTDLSDEELKDLAEILKKLLARYDNLFGN 263 (338)
T ss_pred cCCchHHHHHHHHhccCceEEecCceeEEeccccccCceEEEeccHHHhhhhhhCCHHHHHHHHHHHHHHHHHHhhccCC
Confidence 34799996432 2345689988888888888788888999999999999999999999999988877777666542
Q ss_pred C--CceEEEE-ecC--CCCCeeEEEEee
Q 008383 463 G--KEAVFFE-WLS--KRGTHANLQAVP 485 (567)
Q Consensus 463 g--~~~v~~E-~~~--~~~~H~hi~~vP 485 (567)
. +...|.- ..+ ..-.|+|+|++|
T Consensus 264 ~fpY~m~~h~ap~~~~~~~~~~h~~~~p 291 (338)
T COG1085 264 SFPYSMGFHQAPFNEVNEHYHLHAEIYP 291 (338)
T ss_pred CCceeeeeecCCCCcccccceEEEEEcc
Confidence 1 3344443 112 124689999998
|
|
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.2 Score=50.98 Aligned_cols=109 Identities=14% Similarity=0.139 Sum_probs=62.7
Q ss_pred EEEEEcCCCCC--HHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHH-HH
Q 008383 5 RILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK-VL 81 (567)
Q Consensus 5 KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~-~~ 81 (567)
|||++||+-|+ ...+.+.+.++.++. +.|++|.-||-............+.+ ..+++- +++.|||+.... ++
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~-~~D~vi~NgEn~~gg~gl~~~~~~~L---~~~G~D-~iTlGNH~fD~gel~ 75 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEY-KIDFVIANGENAAGGKGITPKIAKEL---LSAGVD-VITMGNHTWDKKEIL 75 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHC-CCCEEEECCccccCCCCCCHHHHHHH---HhcCCC-EEEecccccCcchHH
Confidence 69999999997 566677788876666 58999999997543211112223332 345555 445589986543 33
Q ss_pred HHHhccccccCcccCCceecccEEE--eCC-CCeEEEcCeEEEEEecc
Q 008383 82 LAASKNSANQGFKMDGFKVTDNLFW--LKG-SGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~i~~Nl~~--Lg~-~gv~~~~GlrIa~lgG~ 126 (567)
+.+... .-.-.+-|+.. -++ ..+++.+|++||.++-.
T Consensus 76 ~~l~~~--------~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~ 115 (255)
T cd07382 76 DFIDEE--------PRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLM 115 (255)
T ss_pred HHHhcC--------cCceEeeecCCCCCCCCeEEEEECCEEEEEEEEe
Confidence 433211 00111223211 122 24556789999988743
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.061 Score=54.90 Aligned_cols=70 Identities=13% Similarity=0.169 Sum_probs=45.5
Q ss_pred CEEEEEcCCCCC--HHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChH
Q 008383 4 PRILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAA 78 (567)
Q Consensus 4 ~KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~ 78 (567)
||||++||+-|+ ...|-+.+..+.+++ +.|++|+-||.....-...++..+.| .+.++-++-+ |||....
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~-~~D~vIaNgEn~~gG~Gi~~~~~~~L---~~~GvDviT~-GNH~~Dk 72 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKY-QADLVIANGENTTHGKGLTLKIYEFL---KQSGVNYITM-GNHTWFQ 72 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhC-CCCEEEEcCcccCCCCCCCHHHHHHH---HhcCCCEEEc-cchhccC
Confidence 799999999999 555666677777666 58999999997543211112222222 3455554444 7998653
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.085 Score=48.52 Aligned_cols=111 Identities=20% Similarity=0.276 Sum_probs=67.4
Q ss_pred CEEEEEcCCCC--CHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHH
Q 008383 4 PRILLCGDVLG--RLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVL 81 (567)
Q Consensus 4 ~KILv~GDvhG--~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~ 81 (567)
|-+|++||.|= +-..|=.|.+++. --|++.-++|+|++.+ .+..+|+ +.+.--+=+|-|.-+
T Consensus 1 mLvL~lgD~HiP~Ra~~Lp~KFkklL-vPgki~hilctGNlcs------~e~~dyl---k~l~~dvhiVrGeFD------ 64 (183)
T KOG3325|consen 1 MLVLVLGDLHIPHRANDLPAKFKKLL-VPGKIQHILCTGNLCS------KESYDYL---KTLSSDVHIVRGEFD------ 64 (183)
T ss_pred CEEEEeccccCCccccccCHHHHhcc-CCCceeEEEEeCCcch------HHHHHHH---HhhCCCcEEEecccC------
Confidence 45899999985 3333434444444 2468999999999876 3566776 344344555666322
Q ss_pred HHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEe
Q 008383 82 LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLT 160 (567)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLT 160 (567)
+|+.|=. .+++|++-+||++..|-.-.+.. ..+.+..|.. .-+||||||
T Consensus 65 --------------------~~~~yP~-~kvvtvGqfkIG~chGhqViP~g-----d~~sL~~LaR----qldvDILl~ 113 (183)
T KOG3325|consen 65 --------------------ENLKYPE-NKVVTVGQFKIGLCHGHQVIPWG-----DPESLALLAR----QLDVDILLT 113 (183)
T ss_pred --------------------ccccCCc-cceEEeccEEEEeecCcEeecCC-----CHHHHHHHHH----hcCCcEEEe
Confidence 1222222 36889999999999997543322 1233333332 247999997
|
|
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.027 Score=58.93 Aligned_cols=74 Identities=18% Similarity=0.279 Sum_probs=46.1
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhh----cCCC--cEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKS----AGPF--DAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k----~Gpf--D~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
..+.|+||+||++.+|.+-++.+.-. .|.+ .-+|++||+..-++...+-+.-++.-....|--+|++-||||..
T Consensus 48 ~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~ 127 (311)
T cd07419 48 APIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDR 127 (311)
T ss_pred CCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchH
Confidence 35899999999999988766554311 1111 24789999976444333333322221234566799999999963
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.37 Score=52.98 Aligned_cols=90 Identities=10% Similarity=0.118 Sum_probs=49.1
Q ss_pred cCeEEEEEecccCCCCCCCCCCCHHHHHHHHH-hhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHH
Q 008383 116 HGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA-LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELV 194 (567)
Q Consensus 116 ~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~-~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~ 194 (567)
+|++|..|--.... ......+.+++++-|++ |+.....-=|+++|.+|..+.........+. ........+.+++
T Consensus 300 ggvrfIvLDSt~~~-G~~~G~L~eeQL~WLeqeLa~a~~k~VVVf~HHPp~s~g~~~~Dp~~pg---~~~~n~~eLldLL 375 (496)
T TIGR03767 300 GGVRGISMDTTNRA-GGDEGSLGQTQFKWIKDTLRASSDTLFVLFSHHTSWSMVNELTDPVDPG---EKRHLGTELVSLL 375 (496)
T ss_pred CCEEEEEEeCCCcC-CCcCCccCHHHHHHHHHHHhcCCCCCEEEEECCCCcccccccccccccc---ccccCHHHHHHHH
Confidence 45666666443221 11234567888888876 3333344568889988765422111000010 0112345677777
Q ss_pred HHh-CCCEEEEccCCC
Q 008383 195 AEI-KPRYHIAGSKGV 209 (567)
Q Consensus 195 ~~l-kPRYhf~Gh~~~ 209 (567)
+.. +-+.+|+||.|.
T Consensus 376 ~~ypnV~aVfsGHvH~ 391 (496)
T TIGR03767 376 LEHPNVLAWVNGHTHS 391 (496)
T ss_pred hcCCCceEEEECCcCC
Confidence 776 677899999664
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.031 Score=53.08 Aligned_cols=58 Identities=12% Similarity=0.121 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhhcCCCcEEEEecCCCCCChhh-HHHHHHH-hcccCCCCccEEEEccCCCC
Q 008383 18 QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL-LDEFMNY-VEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 18 ~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~-~~~~~~~-l~g~~~~p~ptyfv~GN~~~ 76 (567)
+.++++.++-.+. +.|.||++||++...... ..+.... +.......+++|+|.||||.
T Consensus 28 ~~~~~l~~~~~~~-~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~ 87 (172)
T cd07391 28 DTLERLDRLIEEY-GPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDG 87 (172)
T ss_pred HHHHHHHHHHHhc-CCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCcc
Confidence 4556666665555 479999999998532111 1111111 11124567899999999984
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.35 Score=50.67 Aligned_cols=119 Identities=13% Similarity=-0.012 Sum_probs=61.8
Q ss_pred CEEEEEcCCCCCHH------HHHHHHHHHHhh---cCCCcEEEEecCCCCCChhh------------HHHHHHHhcccCC
Q 008383 4 PRILLCGDVLGRLN------QLFKRVQSVNKS---AGPFDAVLCVGQFFPDSSEL------------LDEFMNYVEGRSE 62 (567)
Q Consensus 4 ~KILv~GDvhG~~~------~l~~kv~~l~~k---~GpfD~vi~~GDff~~~~~~------------~~~~~~~l~g~~~ 62 (567)
++||.+.|+||++. .+-..++++.++ .++--++|-+||+|....-. -.-..+++ ..
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~m---N~ 77 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILIL---NA 77 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHH---hc
Confidence 47999999999853 333334444332 14446999999987532100 00111222 22
Q ss_pred CCccEEEEccCCCChH--HHHHHHhccccccCcccCCceecccEEEeC-----------------------CCCeEEEcC
Q 008383 63 IPIPTYFIGDYGVGAA--KVLLAASKNSANQGFKMDGFKVTDNLFWLK-----------------------GSGNFTLHG 117 (567)
Q Consensus 63 ~p~ptyfv~GN~~~~~--~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg-----------------------~~gv~~~~G 117 (567)
+.+- +.+.||||..- +.+..+-..... .....-..++.|+.+-+ ..-|++.+|
T Consensus 78 ~g~D-a~tlGNHEFD~G~~~L~~~~~~~~~-~~~a~fp~l~aNv~~~~~~~~~~~~~~~~~~~~~~~~~~~py~I~e~~G 155 (313)
T cd08162 78 LGVQ-AIALGNHEFDLGTDELADLIRPSAA-GGGAAFPYLSANLDFSGDANLAGLATADGQQAAAIAGKIAKSTVVEVGG 155 (313)
T ss_pred cCCc-EEeccccccccCHHHHHHHHHhhcc-cccCCCCEEEecccccCCcccccccccccccccccccccCCeEEEEECC
Confidence 2222 57789999652 222222111000 00001236778876432 223446799
Q ss_pred eEEEEEeccc
Q 008383 118 LSVAYLSGRQ 127 (567)
Q Consensus 118 lrIa~lgG~~ 127 (567)
+|||.+|-.-
T Consensus 156 ~kIGviGltt 165 (313)
T cd08162 156 EKIGVVGATT 165 (313)
T ss_pred EEEEEEEecc
Confidence 9999998763
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.084 Score=53.27 Aligned_cols=208 Identities=13% Similarity=0.119 Sum_probs=113.4
Q ss_pred CCEEEEEcCCC--CCHHHHH--HHHHHHHhhcCCCcEEEEecCCCCC-------ChhhHHHHHHHhcccCCCCccEEEEc
Q 008383 3 PPRILLCGDVL--GRLNQLF--KRVQSVNKSAGPFDAVLCVGQFFPD-------SSELLDEFMNYVEGRSEIPIPTYFIG 71 (567)
Q Consensus 3 ~~KILv~GDvh--G~~~~l~--~kv~~l~~k~GpfD~vi~~GDff~~-------~~~~~~~~~~~l~g~~~~p~ptyfv~ 71 (567)
..++||+||.- |.+.+-. ..+.+|.+|. ..|+||-+||=|-. ++.-.+.|+..++. ..+-.|-|-|.
T Consensus 43 slsflvvGDwGr~g~~nqs~va~qmg~ige~l-~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~-pSLQkpWy~vl 120 (336)
T KOG2679|consen 43 SLSFLVVGDWGRRGSFNQSQVALQMGEIGEKL-DIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTA-PSLQKPWYSVL 120 (336)
T ss_pred ceEEEEEcccccCCchhHHHHHHHHHhHHHhc-cceEEEecCCcccccCCCCCCChhHHhhhhhcccC-cccccchhhhc
Confidence 46899999974 5454432 2234455555 49999999994321 22233456666653 44667999999
Q ss_pred cCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEe--cccCCC--CCCCC------CCCHHH
Q 008383 72 DYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLS--GRQSSE--GQQFG------TYSQDD 141 (567)
Q Consensus 72 GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lg--G~~~~~--~~~~~------~~t~~d 141 (567)
||||---.+.++|+.-= ...+..|+|+..+|.. ..++++-+.-+..+. -..... ...|. .|....
T Consensus 121 GNHDyrGnV~AQls~~l----~~~d~RW~c~rsf~~~-ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v~PR~~~~~~~ 195 (336)
T KOG2679|consen 121 GNHDYRGNVEAQLSPVL----RKIDKRWICPRSFYVD-AEIVEMFFVDTTPFMDDTFTLCTDDVYDWRGVLPRVKYLRAL 195 (336)
T ss_pred cCccccCchhhhhhHHH----HhhccceecccHHhhc-ceeeeeeccccccchhhheecccccccccccCChHHHHHHHH
Confidence 99984433434332000 0134679999998887 455554332222221 110101 01111 122222
Q ss_pred HHHHHH-hhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCC
Q 008383 142 VDALRA-LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVD 220 (567)
Q Consensus 142 v~~L~~-~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~ 220 (567)
...|+. +.+....--|++-|-+-+.+..+++. ..-.+.+.-|+++.+-...++||.|+- |- .- .
T Consensus 196 l~~le~~L~~S~a~wkiVvGHh~i~S~~~HG~T----------~eL~~~LlPiL~~n~VdlY~nGHDHcL-Qh---is-~ 260 (336)
T KOG2679|consen 196 LSWLEVALKASRAKWKIVVGHHPIKSAGHHGPT----------KELEKQLLPILEANGVDLYINGHDHCL-QH---IS-S 260 (336)
T ss_pred HHHHHHHHHHhhcceEEEecccceehhhccCCh----------HHHHHHHHHHHHhcCCcEEEecchhhh-hh---cc-C
Confidence 222221 22223456678888777766555442 112346778889999999999996541 10 01 1
Q ss_pred CcceeEEEEccC
Q 008383 221 AVHVTRFLGLAP 232 (567)
Q Consensus 221 ~~~~TRFI~L~~ 232 (567)
....+-|+--|.
T Consensus 261 ~e~~iqf~tSGa 272 (336)
T KOG2679|consen 261 PESGIQFVTSGA 272 (336)
T ss_pred CCCCeeEEeeCC
Confidence 255678886553
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.03 Score=53.29 Aligned_cols=56 Identities=16% Similarity=0.242 Sum_probs=33.1
Q ss_pred HHHHHHHHHhhcCCCcEEEEecCCCCCChhh-HHHHHH----HhcccC-C----CCccEEEEccCCC
Q 008383 19 LFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL-LDEFMN----YVEGRS-E----IPIPTYFIGDYGV 75 (567)
Q Consensus 19 l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~-~~~~~~----~l~g~~-~----~p~ptyfv~GN~~ 75 (567)
+.+++..+..+. +.|+||++||+|...... ..++.+ +..... . ..+|+|+|+||||
T Consensus 33 ~~~~~~~~i~~~-~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD 98 (171)
T cd07384 33 MRRAFKTALQRL-KPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHD 98 (171)
T ss_pred HHHHHHHHHHhc-CCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccc
Confidence 444555555444 579999999998753211 112222 211111 1 2689999999997
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.057 Score=59.01 Aligned_cols=75 Identities=20% Similarity=0.317 Sum_probs=51.0
Q ss_pred CCEEEEEcCCCC------------CHHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh-------hhHH------------
Q 008383 3 PPRILLCGDVLG------------RLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-------ELLD------------ 51 (567)
Q Consensus 3 ~~KILv~GDvhG------------~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~-------~~~~------------ 51 (567)
.+||||..|.|- .|..+ +.|=.|... ...|+||.-||+|..+. ...+
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tF-eEIl~iA~e-~~VDmiLlGGDLFHeNkPSr~~L~~~i~lLRryClgdkP~ 90 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTF-EEILEIAQE-NDVDMILLGGDLFHENKPSRKTLHRCLELLRRYCLGDKPV 90 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHH-HHHHHHHHh-cCCcEEEecCcccccCCccHHHHHHHHHHHHHHccCCCce
Confidence 489999999995 23333 333333333 36999999999998631 0111
Q ss_pred -----------------HHHHHhcccCCCCccEEEEccCCCChHH
Q 008383 52 -----------------EFMNYVEGRSEIPIPTYFIGDYGVGAAK 79 (567)
Q Consensus 52 -----------------~~~~~l~g~~~~p~ptyfv~GN~~~~~~ 79 (567)
....|.+....+.+|++=|.|||+++..
T Consensus 91 ~le~lSD~s~~f~~~~f~~VNY~DpNlNIsIPVFsIHGNHDDpSG 135 (646)
T KOG2310|consen 91 QLEILSDQSVNFGNSVFGNVNYEDPNLNISIPVFSIHGNHDDPSG 135 (646)
T ss_pred eeEEecccceeccccccceecccCCCcceeeeeEEeecCCCCCcc
Confidence 1124666778899999999999999853
|
|
| >PF02744 GalP_UDP_tr_C: Galactose-1-phosphate uridyl transferase, C-terminal domain; InterPro: IPR005850 Galactose-1-phosphate uridyl transferase catalyses the conversion of UDP-glucose and alpha-D-galactose 1-phosphate to alpha-D-glucose 1-phosphate and UDP-galactose during galactose metabolism | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.05 Score=51.64 Aligned_cols=72 Identities=22% Similarity=0.356 Sum_probs=44.8
Q ss_pred CCCccccCC--CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 008383 389 KECWFCLSS--PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK 460 (567)
Q Consensus 389 ~~C~FC~~~--~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~ 460 (567)
..|.||-.- ...+...||+.++++-++.|--.--|--++|+|.+|..++.++++++..++-...+.+...+.
T Consensus 13 Gs~L~~D~~~~E~~~~~Riv~en~~f~a~vP~~a~wP~ev~ilpkrh~~~l~~l~~~E~~dlA~~l~~i~~r~d 86 (166)
T PF02744_consen 13 GSCLFCDHLQMELAEGERIVYENEHFVAFVPFAARWPFEVWILPKRHVPSLADLTDEERDDLAAILKPILRRYD 86 (166)
T ss_dssp SS-HHHHHHHHHHHH-TTEEEE-SSEEEE--TT--STT-EEEEESS--SSGGG--HHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHhhcCCCEEEEECCceEEEEECcccCCcEEEEecCCChhhHHHhhhHHHhhHHHHHHHHHHHhc
Confidence 479999642 223456799999987777776667788999999999999999999977777766555555544
|
The enzyme is present in prokaryotes and eukaryotes. Defects in GalT in humans is the cause of galactosemia, an inherited disorder of galactose metabolism that leads to jaundice, cataracts and mental retardation. This domain describes the C-terminal of Galactose-1-phosphate uridyl transferase. SCOP reports fold duplication of the C-terminal with the N-terminal domain. Both are involved in Zn and Fe binding; GO: 0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity, 0006012 galactose metabolic process; PDB: 1GUP_C 1HXP_A 1HXQ_A 1GUQ_C. |
| >KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.064 Score=53.63 Aligned_cols=69 Identities=16% Similarity=0.277 Sum_probs=47.8
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 6 ILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 6 ILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
+-||||+||+|+.+.+.. ++... +|----|..||+..-++...+.+.-++.=+.+.|--+-++.||||.
T Consensus 62 vtvcGDvHGqf~dl~ELf-kiGG~-~pdtnylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEs 130 (319)
T KOG0371|consen 62 VTVCGDVHGQFHDLIELF-KIGGL-APDTNYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHES 130 (319)
T ss_pred eEEecCcchhHHHHHHHH-HccCC-CCCcceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHH
Confidence 789999999999998766 44433 2445567889997765554444444443334556669999999984
|
|
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.056 Score=50.64 Aligned_cols=44 Identities=14% Similarity=0.163 Sum_probs=27.2
Q ss_pred CCcEEEEecCCCCCChh-hHHHH----HHHhcccC-CCCccEEEEccCCC
Q 008383 32 PFDAVLCVGQFFPDSSE-LLDEF----MNYVEGRS-EIPIPTYFIGDYGV 75 (567)
Q Consensus 32 pfD~vi~~GDff~~~~~-~~~~~----~~~l~g~~-~~p~ptyfv~GN~~ 75 (567)
+.|+||++||++..... ...++ ..+..-.. ..++|+|+|.||||
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD 87 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHD 87 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCC
Confidence 47999999999875321 11122 22221111 13689999999997
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=93.83 E-value=3.4 Score=48.54 Aligned_cols=42 Identities=19% Similarity=0.132 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCCCHHH----------------HHHHHHHHHhhcCCCcEEEEecCCCCC
Q 008383 3 PPRILLCGDVLGRLNQ----------------LFKRVQSVNKSAGPFDAVLCVGQFFPD 45 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~----------------l~~kv~~l~~k~GpfD~vi~~GDff~~ 45 (567)
.++||.+.|+||++.. +-..|+++.+++ +--++|-.||++..
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~-~ntlllD~GD~iqG 96 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEA-KNSVLFDDGDALQG 96 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhC-CCeEEEECCCCCCC
Confidence 3689999999998632 222333333333 44699999998653
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=93.38 E-value=4.6 Score=49.87 Aligned_cols=206 Identities=13% Similarity=0.076 Sum_probs=100.6
Q ss_pred CEEEEEcCCCCCHH----------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHH------------HH
Q 008383 4 PRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEF------------MN 55 (567)
Q Consensus 4 ~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~------------~~ 55 (567)
++||.++|+||++. ++...++++.+++ +--++|-.||++....- .++ +.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~-~n~llld~GD~~qGs~l--~~~~~~~~~~~~~~~~~ 118 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKEN-PNTLLVDNGDLIQGNPL--GEYAVKDNILFKNKTHP 118 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhC-CCeEEEeCCCccCCChh--hhHHhhhccccCCCcCH
Confidence 68999999999863 3334444444443 32355559998764321 000 00
Q ss_pred HhcccCCCCccEEEEccCCCChH--HHHHHHhccccccCcccCCceecccEEEeC------CCCeEEE---------cCe
Q 008383 56 YVEGRSEIPIPTYFIGDYGVGAA--KVLLAASKNSANQGFKMDGFKVTDNLFWLK------GSGNFTL---------HGL 118 (567)
Q Consensus 56 ~l~g~~~~p~ptyfv~GN~~~~~--~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg------~~gv~~~---------~Gl 118 (567)
.+.....+.. -+++.||||..- +.+..+-.. ..-..||.|++.-. ..-|++. +|+
T Consensus 119 ~i~~mN~lgy-Da~~lGNHEFd~G~~~L~~~~~~-------a~fp~l~aNv~~~~~~~~~~py~I~~~~~~~~~g~~~gv 190 (1163)
T PRK09419 119 MIKAMNALGY-DAGTLGNHEFNYGLDFLDGTIKG-------ANFPVLNANVKYKNGKNVYTPYKIKEKTVTDENGKKQGV 190 (1163)
T ss_pred HHHHHhhcCc-cEEeecccccccCHHHHHHHHhc-------CCCCEEEeeeecCCCCcccCCEEEEEEEeeccCCCCCCe
Confidence 1110122222 267789999642 222222111 12346888885432 2234456 899
Q ss_pred EEEEEecccCCCCC-----CC--CCCCHHHHHHHHHhhc--CCCCcc--EEEeCCCCccccccccccccccccCCCCCC-
Q 008383 119 SVAYLSGRQSSEGQ-----QF--GTYSQDDVDALRALAE--EPGIVD--LFLTNEWPSGVTNKAAASDMLVGISDSSNT- 186 (567)
Q Consensus 119 rIa~lgG~~~~~~~-----~~--~~~t~~dv~~L~~~~~--~~~~vD--ILLTh~wP~gI~~~~~~~~~~~~~~~~~~G- 186 (567)
|||.+|=.-+.-.. .. ..|+ +.++++++... ...++| |+|+|.--..- . . ..|
T Consensus 191 kIgiiG~~~p~~~~~~~~~~~g~~~~~-d~v~~~~~~v~~lk~~gaDvII~l~H~G~~~~--~-~-----------~~~~ 255 (1163)
T PRK09419 191 KVGYIGFVPPQIMTWDKKNLKGKVEVK-NIVEEANKTIPEMKKGGADVIVALAHSGIESE--Y-Q-----------SSGA 255 (1163)
T ss_pred EEEEEecCCcchhhcchhhccCcEEEC-CHHHHHHHHHHHHHhcCCCEEEEEeccCcCCC--C-C-----------CCCc
Confidence 99999876321110 00 1222 12333322110 024566 57788542210 0 0 112
Q ss_pred cHHHHHHHHHh-CCCEEEEccCCCccccccccCC-------CCcceeEEEEccCCCC
Q 008383 187 DSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNV-------DAVHVTRFLGLAPVGN 235 (567)
Q Consensus 187 s~~i~~l~~~l-kPRYhf~Gh~~~fyEr~Py~~~-------~~~~~TRFI~L~~~g~ 235 (567)
...+.+|++++ .--..+.||.|..+....|... .....|-.+-.|..|+
T Consensus 256 en~~~~la~~~~gID~Il~GHsH~~~~~~~~~~~~~~~~~~~~i~g~~ivqag~~g~ 312 (1163)
T PRK09419 256 EDSVYDLAEKTKGIDAIVAGHQHGLFPGADYKGVPQFDNAKGTINGIPVVMPKSWGK 312 (1163)
T ss_pred chHHHHHHHhCCCCcEEEeCCCcccccCcccccccccccccceECCEEEEccChhhc
Confidence 22455677554 4668999999887753333211 0123455555565554
|
|
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.38 Score=47.96 Aligned_cols=79 Identities=14% Similarity=0.105 Sum_probs=48.2
Q ss_pred CCcEEEEecCCCCC----C---hhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHHHhccccccCcccCCceecccE
Q 008383 32 PFDAVLCVGQFFPD----S---SELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNL 104 (567)
Q Consensus 32 pfD~vi~~GDff~~----~---~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl 104 (567)
..|.|+++||+|.. + +...+...+++. ...-+.++||++|||| .++.+.... -+-++
T Consensus 29 ~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~-~a~~G~~v~~i~GN~D---fll~~~f~~------------~~g~~ 92 (237)
T COG2908 29 QADALYILGDIFDGWIGDDEPPQLHRQVAQKLLR-LARKGTRVYYIHGNHD---FLLGKRFAQ------------EAGGM 92 (237)
T ss_pred cCcEEEEechhhhhhhcCCcccHHHHHHHHHHHH-HHhcCCeEEEecCchH---HHHHHHHHh------------hcCce
Confidence 35999999999763 1 111111222221 2445789999999997 334332210 12345
Q ss_pred EEeCCCCeEEEcCeEEEEEecc
Q 008383 105 FWLKGSGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 105 ~~Lg~~gv~~~~GlrIa~lgG~ 126 (567)
..+.+.-+.+..|.++.-+=|-
T Consensus 93 ~l~~~~~~~~l~g~~~Ll~HGD 114 (237)
T COG2908 93 TLLPDPIVLDLYGKRILLAHGD 114 (237)
T ss_pred EEcCcceeeeecCcEEEEEeCC
Confidence 6666666667889999988885
|
|
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.80 E-value=0.25 Score=50.98 Aligned_cols=72 Identities=8% Similarity=0.135 Sum_probs=48.0
Q ss_pred CCEEEEEcCCCCCHHH--HHHHHHHHHhhcCCCcEEEEecCCCCC-ChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQ--LFKRVQSVNKSAGPFDAVLCVGQFFPD-SSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~--l~~kv~~l~~k~GpfD~vi~~GDff~~-~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
..||+.++|.|-..-. ..+.+.++-... | |+|+..||++.- .......+...+.. .+.+.++|++.||||-.
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~-~-DlivltGD~~~~~~~~~~~~~~~~L~~-L~~~~gv~av~GNHd~~ 118 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANEL-P-DLIVLTGDYVDGDRPPGVAALALFLAK-LKAPLGVFAVLGNHDYG 118 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcC-C-CEEEEEeeeecCCCCCCHHHHHHHHHh-hhccCCEEEEecccccc
Confidence 3589999999987443 222233333333 4 999999999873 33334455555543 45789999999999743
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=92.19 E-value=2.1 Score=43.65 Aligned_cols=185 Identities=12% Similarity=0.105 Sum_probs=89.0
Q ss_pred CcEEEEecCCCCCC---------------------hhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHHHhcccccc
Q 008383 33 FDAVLCVGQFFPDS---------------------SELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQ 91 (567)
Q Consensus 33 fD~vi~~GDff~~~---------------------~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~l~~~~~~~ 91 (567)
+.-||++||..... ....+++..||+. ..-.+|+.++|||||-....+..-+.-..
T Consensus 43 I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~-l~~~i~V~imPG~~Dp~~~~lPQqplh~~-- 119 (257)
T cd07387 43 IVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQ-LASSVPVDLMPGEFDPANHSLPQQPLHRC-- 119 (257)
T ss_pred eEEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHh-hhcCCeEEECCCCCCcccccCCCCCCCHH--
Confidence 44699999986531 1123456666654 23468999999999743222111000000
Q ss_pred CcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCCCccccccc
Q 008383 92 GFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKA 171 (567)
Q Consensus 92 ~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh~wP~gI~~~~ 171 (567)
=|.. +. --.|+..+..-..++++|++|.+.+|....+-..-..+ ++.++.|+... .+ =|-.|..=...
T Consensus 120 lfp~-s~-~~~~~~~vtNP~~~~i~g~~vLgtsGqni~Di~ky~~~-~~~l~~me~~L--~w------rHlaPTaPDTL- 187 (257)
T cd07387 120 LFPK-SS-NYSTLNLVTNPYEFSIDGVRVLGTSGQNVDDILKYSSL-ESRLDILERTL--KW------RHIAPTAPDTL- 187 (257)
T ss_pred Hhhc-cc-ccCCcEEeCCCeEEEECCEEEEEECCCCHHHHHHhCCC-CCHHHHHHHHH--Hh------cccCCCCCCcc-
Confidence 0000 00 01356666554566789999999999743111000011 12233333211 00 12222110000
Q ss_pred cccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCCcccceeEEEeccC
Q 008383 172 AASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPT 248 (567)
Q Consensus 172 ~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~~K~Kw~yAf~i~ 248 (567)
...|- ..-+-++-.--|...|+||.+.|--+. |.+. ....+|.|++..|-. -.-+--+++.
T Consensus 188 --~~yP~---------~~~Dpfvi~~~PhVyf~Gnq~~f~t~~-~~~~-~~~~v~lv~vP~Fs~---t~~~vlvdl~ 248 (257)
T cd07387 188 --WCYPF---------TDRDPFILEECPHVYFAGNQPKFGTKL-VEGE-EGQRVLLVCVPSFSK---TGTAVLVNLR 248 (257)
T ss_pred --ccccC---------CCCCceeecCCCCEEEeCCCcceeeeE-EEcC-CCCeEEEEEeCCcCc---CCEEEEEECC
Confidence 00000 000111223359999999987663333 4443 356799999999943 2334444443
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.09 E-value=2.7 Score=45.86 Aligned_cols=189 Identities=17% Similarity=0.075 Sum_probs=92.4
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCC-CChh--hHHHHHHHhcccCCCCccEEEEccCCCChHH
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFP-DSSE--LLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK 79 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~-~~~~--~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~ 79 (567)
+.++.++||.--..... ....+...+.++|+||.+|||-= .... .-++|...+.- ...-+|..++.||||....
T Consensus 147 ~~~~~i~GDlG~~~~~~--s~~~~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp-~As~vPymv~~GNHE~d~~ 223 (452)
T KOG1378|consen 147 PTRAAIFGDMGCTEPYT--STLRNQEENLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEP-IASYVPYMVCSGNHEIDWP 223 (452)
T ss_pred ceeEEEEcccccccccc--chHhHHhcccCCcEEEEecchhhcCCCCccchHHHHhhhhh-hhccCceEEecccccccCC
Confidence 45788999965432210 11222334446999999999932 2111 23344444432 3356899999999985421
Q ss_pred H---HHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHH-hhcCC---
Q 008383 80 V---LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA-LAEEP--- 152 (567)
Q Consensus 80 ~---~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~-~~~~~--- 152 (567)
- +.... ... .....+.+--.|++|- +..++..|.+||--... ....++++. +-|+. |++..
T Consensus 224 ~~~~F~~y~-~Rf--~mP~~~s~s~~~l~YS-----fd~G~vhfv~lsse~~~---~~~~~~~QY-~WL~~dL~~v~r~~ 291 (452)
T KOG1378|consen 224 PQPCFVPYS-ARF--NMPGNSSESDSNLYYS-----FDVGGVHFVVLSTETYY---NFLKGTAQY-QWLERDLASVDRKK 291 (452)
T ss_pred Ccccccccc-eee--ccCCCcCCCCCceeEE-----EeeccEEEEEEeccccc---cccccchHH-HHHHHHHHHhcccC
Confidence 0 00000 000 0000001112246653 34667788877532211 111222221 12221 22111
Q ss_pred CCccEEEeCCCCccccccccccccccccCCCCCCc--HHHHHHHHHhCCCEEEEccCCCccccc
Q 008383 153 GIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTD--STVSELVAEIKPRYHIAGSKGVFYARE 214 (567)
Q Consensus 153 ~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs--~~i~~l~~~lkPRYhf~Gh~~~fyEr~ 214 (567)
.+=-|.+-|-|=..-....- ..+ ....+ ..+.+|.-+.+-...|+||.|. |||.
T Consensus 292 tPWlIv~~HrP~Y~S~~~~~---~re----G~~~~~~~~LE~l~~~~~VDvvf~GHvH~-YER~ 347 (452)
T KOG1378|consen 292 TPWLIVQGHRPMYCSSNDAH---YRE----GEFESMREGLEPLFVKYKVDVVFWGHVHR-YERF 347 (452)
T ss_pred CCeEEEEecccceecCCchh---hcc----CcchhhHHHHHHHHHHhceeEEEecccee-hhcc
Confidence 34456666654433221000 001 11112 3799999999999999999885 5873
|
|
| >KOG2958 consensus Galactose-1-phosphate uridylyltransferase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=91.55 E-value=0.33 Score=49.34 Aligned_cols=61 Identities=20% Similarity=0.245 Sum_probs=50.7
Q ss_pred CCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 008383 400 VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK 460 (567)
Q Consensus 400 ~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~ 460 (567)
.+|+.||-++++..+..|=-.+-|--+||||.+|+.++.++++-+..+|....+.|..-|.
T Consensus 212 l~Kervv~enehfivvvPywA~wPfEtllipk~h~~~~~~l~~~~k~dLasiLK~ll~Kyd 272 (354)
T KOG2958|consen 212 LEKERVVVENEHFIVVVPYWATWPFETLLIPKRHVSRFHELDEVEKVDLASILKLLLIKYD 272 (354)
T ss_pred hhhceEEeecCceEEEeehhhcCcceeeeechhhhhhhcccchHHHhhHHHHHHHHHHHHH
Confidence 5789999999998888887777788899999999999999999888877776666554444
|
|
| >KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=91.33 E-value=0.46 Score=46.55 Aligned_cols=68 Identities=18% Similarity=0.371 Sum_probs=49.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhhcC--CCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 5 RILLCGDVLGRLNQLFKRVQSVNKSAG--PFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~G--pfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
-|-||||+||.|-.|.+..+. .| |=---|..|||..-++-.++.|.-++.-..+-|-.+-.+-||||.
T Consensus 47 PVTvCGDIHGQFyDL~eLFrt----gG~vP~tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEs 116 (306)
T KOG0373|consen 47 PVTVCGDIHGQFYDLLELFRT----GGQVPDTNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHES 116 (306)
T ss_pred CeeEeeccchhHHHHHHHHHh----cCCCCCcceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchh
Confidence 478999999999888765443 23 444567899998776655666666655446677778899999985
|
|
| >KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=91.25 E-value=0.37 Score=48.05 Aligned_cols=68 Identities=18% Similarity=0.356 Sum_probs=47.5
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHhhcC--CCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 6 ILLCGDVLGRLNQLFKRVQSVNKSAG--PFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 6 ILv~GDvhG~~~~l~~kv~~l~~k~G--pfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
|-||||+||.|..|.+..+ ..| |--=-|.+||+..-+....+.+.-++.=+..-|--+-.+-||||..
T Consensus 45 vtvcGDIHGQf~Dllelf~----igG~~~~t~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsR 114 (303)
T KOG0372|consen 45 VTVCGDIHGQFYDLLELFR----IGGDVPETNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESR 114 (303)
T ss_pred cEEeecccchHHHHHHHHH----hCCCCCCCceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhh
Confidence 7899999999998876443 223 3455788999977655445555544443355677789999999853
|
|
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=90.53 E-value=0.36 Score=46.93 Aligned_cols=44 Identities=20% Similarity=0.163 Sum_probs=27.7
Q ss_pred CCcEEEEecCCCCCChhhHHHHHHHhccc------CC----------------CCccEEEEccCCC
Q 008383 32 PFDAVLCVGQFFPDSSELLDEFMNYVEGR------SE----------------IPIPTYFIGDYGV 75 (567)
Q Consensus 32 pfD~vi~~GDff~~~~~~~~~~~~~l~g~------~~----------------~p~ptyfv~GN~~ 75 (567)
..|.|+++||+|+..-...++|.+++... .. -.+|++.|+||||
T Consensus 44 ~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHD 109 (193)
T cd08164 44 KPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHD 109 (193)
T ss_pred CCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCccc
Confidence 46999999999975322233444332210 10 1488999999997
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.94 E-value=0.55 Score=51.51 Aligned_cols=102 Identities=23% Similarity=0.449 Sum_probs=62.9
Q ss_pred cCCCCcccceeEEEeccCCCCCCccccccCCCCCCcCCCCccccCCCCcccccCCCCCCCCCCcccccccccccccCCCC
Q 008383 231 APVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQKRQKHGGG 310 (567)
Q Consensus 231 ~~~g~~~K~Kw~yAf~i~p~~~~~~~~l~~~p~~~t~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (567)
|.|+.++- -||+|.|.|=+.- .=-+=|+|||..+. +..++|.+ ..|. |.
T Consensus 187 ~~ys~DeF--rMy~fKir~C~R~-------~shDwteCPf~Hpg-----EkARRRDP-----Rkyh-Ys----------- 235 (528)
T KOG1595|consen 187 GIYSSDEF--RMYSFKIRRCSRP-------RSHDWTECPFAHPG-----EKARRRDP-----RKYH-YS----------- 235 (528)
T ss_pred ccccccce--EEEeeeecccCCc-------cCCCcccCCccCCC-----cccccCCc-----cccc-cc-----------
Confidence 77877554 6999999987642 23588999997531 11122211 1111 11
Q ss_pred CCCCcceeeeccCCCCCCCcccccCCc----hhhhhhccccchhhhccccCCCCCCcccccccC
Q 008383 311 DGDKMCFKFIYSGSCPRGEKCNFRHDT----DAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (567)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (567)
.-+|=.|+. |+|.+|+.|+|||-- .+.+.|-.+.|-|- |.|.+ +=|.+.|..+
T Consensus 236 --~tpCPefrk-G~C~rGD~CEyaHgvfEcwLHPa~YRT~~CkDg---~~C~R-rvCfFAH~~e 292 (528)
T KOG1595|consen 236 --STPCPEFRK-GSCERGDSCEYAHGVFECWLHPARYRTRKCKDG---GYCPR-RVCFFAHSPE 292 (528)
T ss_pred --CccCccccc-CCCCCCCccccccceehhhcCHHHhccccccCC---CCCcc-ceEeeecChH
Confidence 014555554 889999999999974 46677878888442 55554 5566666544
|
|
| >cd00608 GalT Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate | Back alignment and domain information |
|---|
Probab=89.81 E-value=4.2 Score=42.91 Aligned_cols=61 Identities=16% Similarity=0.037 Sum_probs=38.3
Q ss_pred eEEEEeccccCCCCCCCHHHHHHHHH-HHHHHHHHHHhcCC-ceEEEEecC---C-CCCeeEEEEee
Q 008383 425 HVLVIPVEHVPNTISTSPECEKELGR-FQNSLMMYYKNQGK-EAVFFEWLS---K-RGTHANLQAVP 485 (567)
Q Consensus 425 H~LIiP~~H~~s~~~~~~~~~~E~~~-~~~~L~~~~~~~g~-~~v~~E~~~---~-~~~H~hi~~vP 485 (567)
=++|-.-.|..++.+++.+.+.++.. +++.+.++.+..+. -+.+||+.. + ...|-|.|++-
T Consensus 95 eVii~sp~H~~~l~~~~~~~i~~v~~~~~~r~~~l~~~~~~~yv~if~N~G~~aGaSl~HpH~Qi~a 161 (329)
T cd00608 95 EVICFSPDHNLTLAEMSVAEIREVVEAWAERTRELGKNPRIKYVQIFENKGAEMGASLPHPHGQIWA 161 (329)
T ss_pred EEEEECCcccCChhhCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeecCcccccCCCCCCeeeee
Confidence 35677889999999999887666654 45555555443333 355677221 2 24688888764
|
The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer. |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.40 E-value=0.99 Score=45.12 Aligned_cols=67 Identities=18% Similarity=0.292 Sum_probs=43.6
Q ss_pred CEEEEEcCCCCCHHH----------------HHHHHHHHHhhcCCCcEEEEecCCCCCC---h----hhHHHHHHHhccc
Q 008383 4 PRILLCGDVLGRLNQ----------------LFKRVQSVNKSAGPFDAVLCVGQFFPDS---S----ELLDEFMNYVEGR 60 (567)
Q Consensus 4 ~KILv~GDvhG~~~~----------------l~~kv~~l~~k~GpfD~vi~~GDff~~~---~----~~~~~~~~~l~g~ 60 (567)
-+.||+.|+|=-+.. +.+++.++-.+.+ .+.||++||++-.- . .....|.+++.+.
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~-p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYG-PKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcC-CCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 368999999965444 4455655555665 69999999995531 1 1222344444321
Q ss_pred CCCCccEEEEccCCCC
Q 008383 61 SEIPIPTYFIGDYGVG 76 (567)
Q Consensus 61 ~~~p~ptyfv~GN~~~ 76 (567)
-+++|.||||.
T Consensus 99 -----evi~i~GNHD~ 109 (235)
T COG1407 99 -----EVIIIRGNHDN 109 (235)
T ss_pred -----cEEEEeccCCC
Confidence 48999999984
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=89.33 E-value=4.4 Score=46.60 Aligned_cols=113 Identities=12% Similarity=-0.098 Sum_probs=60.9
Q ss_pred CCEEEEEcCCCCCHHH----------------HHHHHHHHHhhcCCCcEEEEecCCCCCChhhH------------HHHH
Q 008383 3 PPRILLCGDVLGRLNQ----------------LFKRVQSVNKSAGPFDAVLCVGQFFPDSSELL------------DEFM 54 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~----------------l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~------------~~~~ 54 (567)
.++||.+.|+||++.. +...++++.+++ +--++|-.||++....-.. .-+.
T Consensus 2 ~l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~-~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~ 80 (626)
T TIGR01390 2 DLRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEV-KNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVY 80 (626)
T ss_pred eEEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhC-CCeEEEECCCcCCCccchhhhhhccccCCCcChHH
Confidence 4689999999999742 333344443333 3469999999876421100 0011
Q ss_pred HHhcccCCCCccEEEEccCCCChH--HHHHHHhccccccCcccCCceecccEEEeC-------CCCeEEE-----c----
Q 008383 55 NYVEGRSEIPIPTYFIGDYGVGAA--KVLLAASKNSANQGFKMDGFKVTDNLFWLK-------GSGNFTL-----H---- 116 (567)
Q Consensus 55 ~~l~g~~~~p~ptyfv~GN~~~~~--~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg-------~~gv~~~-----~---- 116 (567)
+.+ ..++.- ..+.||||..- +.+..+-.. ..-..||.|++... ..-|++. +
T Consensus 81 ~~m---N~lgyD-a~tlGNHEFd~G~~~L~~~~~~-------a~fP~l~aNv~~~~~~~~~~~py~I~~~~~~~~~G~~~ 149 (626)
T TIGR01390 81 KAM---NLLKYD-VGNLGNHEFNYGLPFLKQAIAA-------AKFPIVNANVVDAGTGQPAFTPYLIQERSVVDTDGKPH 149 (626)
T ss_pred HHH---hhcCcc-EEecccccccccHHHHHHHHHh-------CCCCEEEEEEEeCCCCCcccCCeEEEEEEeeccCCCcc
Confidence 111 222222 57789999652 222222111 12346888886532 1223333 2
Q ss_pred CeEEEEEeccc
Q 008383 117 GLSVAYLSGRQ 127 (567)
Q Consensus 117 GlrIa~lgG~~ 127 (567)
|+|||.+|=.-
T Consensus 150 ~~kIGiIG~~~ 160 (626)
T TIGR01390 150 TLKVGYIGFVP 160 (626)
T ss_pred ceEEEEEEecC
Confidence 69999998753
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.93 E-value=0.8 Score=42.74 Aligned_cols=69 Identities=12% Similarity=0.128 Sum_probs=45.9
Q ss_pred CCCCEEEEEcCCCCC------------HHHHHH-HHHHHHhhcCCCcEEEEecCCCCCCh--hhHHHHHHHhcccCCCCc
Q 008383 1 MSPPRILLCGDVLGR------------LNQLFK-RVQSVNKSAGPFDAVLCVGQFFPDSS--ELLDEFMNYVEGRSEIPI 65 (567)
Q Consensus 1 M~~~KILv~GDvhG~------------~~~l~~-kv~~l~~k~GpfD~vi~~GDff~~~~--~~~~~~~~~l~g~~~~p~ 65 (567)
|+..+|.++||.|=. ++..-+ -++.+++--+|=|.|-.+|||-.... .+...+++.|.|
T Consensus 1 ~sm~mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerLnG------ 74 (186)
T COG4186 1 ASMTMMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERLNG------ 74 (186)
T ss_pred CceeEEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHcCC------
Confidence 555689999999842 222221 25556666679999999999965432 333455555555
Q ss_pred cEEEEccCCC
Q 008383 66 PTYFIGDYGV 75 (567)
Q Consensus 66 ptyfv~GN~~ 75 (567)
-..+|+|||+
T Consensus 75 rkhlv~GNhD 84 (186)
T COG4186 75 RKHLVPGNHD 84 (186)
T ss_pred cEEEeeCCCC
Confidence 3478999997
|
|
| >COG4360 APA2 ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.41 E-value=0.71 Score=45.73 Aligned_cols=72 Identities=24% Similarity=0.350 Sum_probs=42.2
Q ss_pred CCEEE-EEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCceEEEE--ecCCC-CCeeEEEEe
Q 008383 409 GEYYY-CALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFE--WLSKR-GTHANLQAV 484 (567)
Q Consensus 409 g~~~y-l~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~g~~~v~~E--~~~~~-~~H~hi~~v 484 (567)
++..| +.+.|.|+++-|.|||-.+--..-..++.. .|..+..-+-..+| .|||. -.++. ..|-|+|+|
T Consensus 90 ~s~th~~llNKF~VVdeHlLiVTrefedQ~s~LTl~------Df~ta~~vL~~ldg--lvFYNsGp~aGaSq~HkHLQi~ 161 (298)
T COG4360 90 ISDTHKLLLNKFPVVDEHLLIVTREFEDQESALTLA------DFTTAYAVLCGLDG--LVFYNSGPIAGASQDHKHLQIV 161 (298)
T ss_pred CchhHhhhhhcCCcccceeEEeehhhhhccccCCHH------HHHHHHHHHhcccc--eEEecCCCCcCcCCCccceeEe
Confidence 34466 456899999999999987533322223322 12221111111233 78887 12222 479999999
Q ss_pred ecCc
Q 008383 485 PIPT 488 (567)
Q Consensus 485 Pvp~ 488 (567)
|.|.
T Consensus 162 pmPf 165 (298)
T COG4360 162 PMPF 165 (298)
T ss_pred eccc
Confidence 9994
|
|
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=88.40 E-value=0.9 Score=49.64 Aligned_cols=60 Identities=18% Similarity=0.313 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhccc-------------------------CCCCccEEE
Q 008383 16 LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGR-------------------------SEIPIPTYF 69 (567)
Q Consensus 16 ~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~-~~~~~~~~~l~g~-------------------------~~~p~ptyf 69 (567)
+++++.+|++|+.+. |||++|.+||.....+ .++.=+.+.|+|. ....+|.|.
T Consensus 84 ~~AaVqtvNal~~~~-p~df~is~GD~~nn~~~nElrWyidvldG~~I~p~SG~~~~~e~v~~~~p~~a~GL~~~iPWY~ 162 (492)
T TIGR03768 84 LDAAVQTVNDLHKRD-RFDFGISLGDACNSTQYNELRWYIDVLDGKPITPSSGAHAGADTIDYQKPFQAAGLDKSIPWYQ 162 (492)
T ss_pred HHHHHHHHHHhhcCC-CceEEEeccccccchhHHHHHHHHHHhcCCeeccCCCCCCCccCCCCCCcccccccCCCCceEE
Confidence 566777777776544 9999999999976532 1122222334442 112389999
Q ss_pred EccCCCC
Q 008383 70 IGDYGVG 76 (567)
Q Consensus 70 v~GN~~~ 76 (567)
+.||||.
T Consensus 163 v~GNHD~ 169 (492)
T TIGR03768 163 VLGNHDH 169 (492)
T ss_pred eecCCcc
Confidence 9999974
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=88.10 E-value=0.54 Score=49.56 Aligned_cols=206 Identities=13% Similarity=0.186 Sum_probs=104.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHH-----
Q 008383 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK----- 79 (567)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~----- 79 (567)
-|.++||+||++..|...+....... |=.-.+.+||...-+....+.+.-+++=....|--++.+-||||...-
T Consensus 60 PV~i~GDiHGq~~DLlrlf~~~g~~p-p~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yG 138 (331)
T KOG0374|consen 60 PVKIVGDIHGQFGDLLRLFDLLGSFP-PDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYG 138 (331)
T ss_pred CEEEEccCcCCHHHHHHHHHhcCCCC-CcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceee
Confidence 48999999999999886555443121 457788999985543332222222222235677778999999996521
Q ss_pred HHHHHhccccccCcccCCceec-c-cEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhc-CCC--C
Q 008383 80 VLLAASKNSANQGFKMDGFKVT-D-NLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAE-EPG--I 154 (567)
Q Consensus 80 ~~~~l~~~~~~~~~~~~~~~i~-~-Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~-~~~--~ 154 (567)
++++... ... ....|-+ . ..-+|.-.. .+++ +|..+=|..++.-. +.++++.+..-.. ... -
T Consensus 139 FydE~~r-r~~----~~~~w~~F~~~f~~mp~~a--~i~~-kI~CmhGGlsp~l~-----~~~~i~~i~rp~~~~~~gll 205 (331)
T KOG0374|consen 139 FYDECKR-RYG----EIKLWKAFNDAFNCLPLAA--LIDG-KILCMHGGLSPHLK-----SLDQIRAIPRPTDSPDKGLL 205 (331)
T ss_pred eHHHHHH-hcc----hHHHHHHHHHHHhhCchhh--eecc-eEEEecCCCChhhc-----ChHHHhhccCCcCCCcccee
Confidence 1222110 000 0000000 0 011111111 1233 33333333222111 2344544442110 011 2
Q ss_pred ccEEEeCCCC--ccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccC--CCccccccccCCCCcceeEEEEc
Q 008383 155 VDLFLTNEWP--SGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSK--GVFYAREPYSNVDAVHVTRFLGL 230 (567)
Q Consensus 155 vDILLTh~wP--~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~--~~fyEr~Py~~~~~~~~TRFI~L 230 (567)
.|+|-++.=. .|..... .++. ...|..+++++++++.=...+=+|. ...||. | . +..-+|-|-+.
T Consensus 206 ~DLlWsdp~~~~~g~~~n~------Rg~s-~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyef--f-a-~r~lvTIFSAP 274 (331)
T KOG0374|consen 206 CDLLWSDPDDDVPGWEEND------RGVS-FTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEF--F-A-GRKLVTIFSAP 274 (331)
T ss_pred eeeeecCCCCCCCCcccCC------Ccee-eEecHHHHHHHHHHhCcceEEEcCccccccceE--e-c-CceEEEEecCc
Confidence 4554332111 1111111 1222 2478999999999999999999993 345553 2 2 25679999988
Q ss_pred cCCCC
Q 008383 231 APVGN 235 (567)
Q Consensus 231 ~~~g~ 235 (567)
.=+|.
T Consensus 275 ~Ycg~ 279 (331)
T KOG0374|consen 275 NYCGE 279 (331)
T ss_pred hhccc
Confidence 88876
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=87.88 E-value=1.2 Score=48.07 Aligned_cols=46 Identities=20% Similarity=0.117 Sum_probs=32.6
Q ss_pred CCCcEEEEecCCCCCChh-hHHHHHHHhccc-----CCCCccEEEEccCCCC
Q 008383 31 GPFDAVLCVGQFFPDSSE-LLDEFMNYVEGR-----SEIPIPTYFIGDYGVG 76 (567)
Q Consensus 31 GpfD~vi~~GDff~~~~~-~~~~~~~~l~g~-----~~~p~ptyfv~GN~~~ 76 (567)
...|+++.+||+|..+.. ..+||.+++... .+..+++..++||||-
T Consensus 92 lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 92 LKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred cCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 467999999999985332 244666655432 2357899999999984
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=87.83 E-value=31 Score=34.30 Aligned_cols=98 Identities=10% Similarity=0.067 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHHHhhcCCCcEEEEecCC------C-CC-Ch---hhHHHHHHHhcccCCCCccEEEEccCCCChHH---
Q 008383 14 GRLNQLFKRVQSVNKSAGPFDAVLCVGQF------F-PD-SS---ELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK--- 79 (567)
Q Consensus 14 G~~~~l~~kv~~l~~k~GpfD~vi~~GDf------f-~~-~~---~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~--- 79 (567)
.+++.+|+.+..+-+. .|++++=-.. . .. .. ....+..+.+ ..+++-..-+++||+..-.
T Consensus 22 ~~~~~~~~~v~~~~~~---~D~~~~NlE~~~~~~~~~~~~~~~~f~~~~~~~~~L---~~~G~d~~tlaNNH~fD~G~~g 95 (239)
T cd07381 22 YDFDPLFEDVKPLLRA---ADLAIGNLETPLTDKGSPAPSKYPHFRAPPEVADAL---KAAGFDVVSLANNHTLDYGEEG 95 (239)
T ss_pred CCchhHHHHHHHHHhc---CCEEEEEeecCccCCCCcCCCCceEecCCHHHHHHH---HHhCCCEEEcccccccccchHH
Confidence 3577888888887764 4777543221 1 00 00 0122333333 4567777778889986521
Q ss_pred HHHHHhccccccCcccCCceecccEEEeC---------CCCeEEEcCeEEEEEecccCC
Q 008383 80 VLLAASKNSANQGFKMDGFKVTDNLFWLK---------GSGNFTLHGLSVAYLSGRQSS 129 (567)
Q Consensus 80 ~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg---------~~gv~~~~GlrIa~lgG~~~~ 129 (567)
+.+.+.... ..|+.++| +.-+++++|++|+.+|-....
T Consensus 96 l~~t~~~l~------------~~~i~~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~~ 142 (239)
T cd07381 96 LLDTLDALD------------EAGIAHAGAGRNLEEARRPAILEVNGIKVAFLAYTYGT 142 (239)
T ss_pred HHHHHHHHH------------HcCCceeECCCCHHHhcCcEEEEECCEEEEEEEEECCC
Confidence 222221000 12233332 223446899999999987543
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=86.79 E-value=35 Score=33.94 Aligned_cols=106 Identities=11% Similarity=0.095 Sum_probs=57.7
Q ss_pred EEEEEcCCC-------CCHHHHHHHHHHHHhhcCCCcEEEEe------cCC--CCCC-h---hhHHHHHHHhcccCCCCc
Q 008383 5 RILLCGDVL-------GRLNQLFKRVQSVNKSAGPFDAVLCV------GQF--FPDS-S---ELLDEFMNYVEGRSEIPI 65 (567)
Q Consensus 5 KILv~GDvh-------G~~~~l~~kv~~l~~k~GpfD~vi~~------GDf--f~~~-~---~~~~~~~~~l~g~~~~p~ 65 (567)
+|+++||+- .+++.+|+.+..+-++ .|++++= ++- .... + ....++.+.+ ..+++
T Consensus 1 ~i~~~GDi~~~~~~~~~~~~~~~~~v~~~~~~---aD~~~~NlE~~~~~~~~~~~~~~~~~f~~~~~~~~~l---~~~G~ 74 (239)
T smart00854 1 TLSFVGDVMLGRGVYKADFSPPFAGVKPLLRA---ADLAIGNLETPITGSGSPASGKKYPNFRAPPENAAAL---KAAGF 74 (239)
T ss_pred CEEEEeeecccCcccccCcchHHHHHHHHHhc---CCEeEEEeeccccCCCCCCCCCCceEecCCHHHHHHH---HHhCC
Confidence 478888872 3478888888887654 4766653 111 1100 0 1112333333 55677
Q ss_pred cEEEEccCCCChHH---HHHHHhccccccCcccCCceecccEEEeC---------CCCeEEEcCeEEEEEecccC
Q 008383 66 PTYFIGDYGVGAAK---VLLAASKNSANQGFKMDGFKVTDNLFWLK---------GSGNFTLHGLSVAYLSGRQS 128 (567)
Q Consensus 66 ptyfv~GN~~~~~~---~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg---------~~gv~~~~GlrIa~lgG~~~ 128 (567)
-+.-+++||+..-. +.+.+.... ..|+.++| +.-+++++|++||.+|-+..
T Consensus 75 d~~~laNNH~fD~G~~gl~~t~~~l~------------~a~i~~~g~~~~~~~~~~~~i~~~~g~kIg~ig~t~~ 137 (239)
T smart00854 75 DVVSLANNHSLDYGEEGLLDTLAALD------------AAGIAHVGAGRNLAEARKPAIVEVKGIKIALLAYTYG 137 (239)
T ss_pred CEEEeccCcccccchHHHHHHHHHHH------------HCCCCEeeCCCChHHhhCcEEEEECCEEEEEEEEEcC
Confidence 77788889986522 222221100 12333333 12344678999999997754
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.85 E-value=5.8 Score=39.84 Aligned_cols=106 Identities=16% Similarity=0.169 Sum_probs=60.7
Q ss_pred CEEEEEcCCCCC--HHHHHHHHHHHHhhcCCCcEEEEecCC----CCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 4 PRILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQF----FPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 4 ~KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~vi~~GDf----f~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
||||++||+-|+ .+.+.+.+..+..|- +.|++|+=|.. |+...+ ...+++ +.++- +++.|||-=.
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~ky-k~dfvI~N~ENaa~G~Git~k---~y~~l~----~~G~d-viT~GNH~wd 71 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKY-KIDFVIVNGENAAGGFGITEK---IYKELL----EAGAD-VITLGNHTWD 71 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhh-cCcEEEEcCccccCCcCCCHH---HHHHHH----HhCCC-EEeccccccc
Confidence 799999999997 677888888887775 47999999986 333322 233333 23333 5677887422
Q ss_pred -HHHHHHHhccccccCcccCCceecccEEEeCC-CCeEEEcCeEEEEEe
Q 008383 78 -AKVLLAASKNSANQGFKMDGFKVTDNLFWLKG-SGNFTLHGLSVAYLS 124 (567)
Q Consensus 78 -~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~-~gv~~~~GlrIa~lg 124 (567)
.++++-+..... -..-.. .|+. ..|+ +++++.+|.+|+.+.
T Consensus 72 ~~ei~~~i~~~~~----ilRP~N-~p~~-~~G~G~~~f~~ng~ki~V~N 114 (266)
T COG1692 72 QKEILDFIDNADR----ILRPAN-YPDG-TPGKGSRIFKINGKKLAVIN 114 (266)
T ss_pred chHHHHHhhcccc----eeccCC-CCCC-CCcceEEEEEeCCcEEEEEE
Confidence 334444421100 000000 1121 3444 345677887777654
|
|
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=85.71 E-value=6.2 Score=45.63 Aligned_cols=113 Identities=12% Similarity=-0.010 Sum_probs=61.0
Q ss_pred CCEEEEEcCCCCCHH----------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHH-----------
Q 008383 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMN----------- 55 (567)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~----------- 55 (567)
.++||.+.|+||++. ++-..++++.+++ +--++|-.||++....- .++..
T Consensus 25 ~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~-~n~llvD~GD~~qGsp~--~~~~~~~~~~~g~~~p 101 (649)
T PRK09420 25 DLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEA-KNSVLVDNGDLIQGSPL--GDYMAAKGLKAGDVHP 101 (649)
T ss_pred eEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhC-CCEEEEECCCcCCCchh--hhhhhhccccCCCcch
Confidence 578999999999863 2333344443333 34689999998764321 11110
Q ss_pred HhcccCCCCccEEEEccCCCChH--HHHHHHhccccccCcccCCceecccEEEeC-------CCCeEEE-----c----C
Q 008383 56 YVEGRSEIPIPTYFIGDYGVGAA--KVLLAASKNSANQGFKMDGFKVTDNLFWLK-------GSGNFTL-----H----G 117 (567)
Q Consensus 56 ~l~g~~~~p~ptyfv~GN~~~~~--~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg-------~~gv~~~-----~----G 117 (567)
.+.-...++. -..+.||||..- +.+..+-.. ..-..||.|++... ..-|++. + |
T Consensus 102 ~i~amN~lgy-Da~tlGNHEFd~G~~~L~~~~~~-------a~fP~l~ANv~~~~~~~~~~~py~I~e~~v~~~~G~~~~ 173 (649)
T PRK09420 102 VYKAMNTLDY-DVGNLGNHEFNYGLDYLKKALAG-------AKFPYVNANVIDAKTGKPLFTPYLIKEKEVKDKDGKEHT 173 (649)
T ss_pred HHHHHHhcCC-cEEeccchhhhcCHHHHHHHHhc-------CCCCEEEEEEEecCCCCcccCCeEEEEEEeeccCCCccc
Confidence 0000011222 367889999652 233322111 12347888887432 1223333 3 5
Q ss_pred eEEEEEecc
Q 008383 118 LSVAYLSGR 126 (567)
Q Consensus 118 lrIa~lgG~ 126 (567)
+|||.+|=.
T Consensus 174 vkIGiIGl~ 182 (649)
T PRK09420 174 IKIGYIGFV 182 (649)
T ss_pred eEEEEEEec
Confidence 999999854
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=85.46 E-value=3.3 Score=48.89 Aligned_cols=112 Identities=13% Similarity=-0.027 Sum_probs=61.3
Q ss_pred CCEEEEEcCCCCCHH----------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChhh----------HHH---H
Q 008383 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL----------LDE---F 53 (567)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~----------~~~---~ 53 (567)
.++||.+.|+||++. ++-..|+++.+++ +--++|-.||++....-. .++ .
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~-~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~ 193 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKEN-PNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPM 193 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhC-CCEEEEecCCCCCCCcccchhhhccccccCcchHH
Confidence 368999999999864 2333344443333 446899999986532100 000 1
Q ss_pred HHHhcccCCCCccEEEEccCCCChH--HHHHHHhccccccCcccCCceecccEEEeCC-------CCeEEE-----cC--
Q 008383 54 MNYVEGRSEIPIPTYFIGDYGVGAA--KVLLAASKNSANQGFKMDGFKVTDNLFWLKG-------SGNFTL-----HG-- 117 (567)
Q Consensus 54 ~~~l~g~~~~p~ptyfv~GN~~~~~--~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~-------~gv~~~-----~G-- 117 (567)
.+.+ ..++.- ..+.||||..- +.+..+-.. ..-..||.|++.... .-|++. +|
T Consensus 194 i~am---N~LGyD-A~tLGNHEFDyG~d~L~~~l~~-------a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~d~~G~~ 262 (814)
T PRK11907 194 YAAL---EALGFD-AGTLGNHEFNYGLDYLEKVIAT-------ANMPIVNANVLDPTTGDFLYTPYTIVTKTFTDTEGKK 262 (814)
T ss_pred HHHH---hccCCC-EEEechhhcccCHHHHHHHHHh-------CCCCEEEeeeeecCCCCccCCCeEEEEEEEecCCCcc
Confidence 1121 223332 57889999652 233322111 123468888875432 223333 55
Q ss_pred --eEEEEEecc
Q 008383 118 --LSVAYLSGR 126 (567)
Q Consensus 118 --lrIa~lgG~ 126 (567)
+||+++|=.
T Consensus 263 ~~vKIGiIGlv 273 (814)
T PRK11907 263 VTLNIGITGIV 273 (814)
T ss_pred cceEEEEEEeC
Confidence 999999854
|
|
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=81.99 E-value=3.4 Score=40.14 Aligned_cols=115 Identities=10% Similarity=0.131 Sum_probs=53.2
Q ss_pred EEEEcCCCCC-HHHHHHHHHHHHhh---cCCCcEEEEecCCCCCCh------------hhHH-HHHHHhcccCCC--Ccc
Q 008383 6 ILLCGDVLGR-LNQLFKRVQSVNKS---AGPFDAVLCVGQFFPDSS------------ELLD-EFMNYVEGRSEI--PIP 66 (567)
Q Consensus 6 ILv~GDvhG~-~~~l~~kv~~l~~k---~GpfD~vi~~GDff~~~~------------~~~~-~~~~~l~g~~~~--p~p 66 (567)
|++++|.|-. =...++.+..+-.. ..+.+++|++|+|..... .... .+..+.+-..++ .+.
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5667776654 22234444444332 236799999999977411 1111 111222112333 478
Q ss_pred EEEEccCCCChHHHHHHHhccccccCcccC-Cceecc--cEEEeCCCCeEEEcCeEEEEEecc
Q 008383 67 TYFIGDYGVGAAKVLLAASKNSANQGFKMD-GFKVTD--NLFWLKGSGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 67 tyfv~GN~~~~~~~~~~l~~~~~~~~~~~~-~~~i~~--Nl~~Lg~~gv~~~~GlrIa~lgG~ 126 (567)
+++|+|++|.... ..+++... ... -..+.. ++.++..=-.+.++|++|+..+|-
T Consensus 81 vvlvPg~~D~~~~--~~lPq~pl----~~~~~~~~~~~~~~~~~sNP~~~~i~~~~i~~~s~d 137 (209)
T PF04042_consen 81 VVLVPGPNDPTSS--PVLPQPPL----HSKLFPKLKKYSNIHFVSNPCRISINGQEIGVTSGD 137 (209)
T ss_dssp EEEE--TTCTT-S---SCSB--------TTTTCHHCTTTTEEE--CSEEEEETTEEEEE-SSH
T ss_pred EEEeCCCcccccc--CCCCCCCC----CHHHHhhhhhcCceEEeCCCeEEEEeCCcEEEECCc
Confidence 9999998875432 11211100 000 001122 277777666678999999988875
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >PLN03103 GDP-L-galactose-hexose-1-phosphate guanyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.27 E-value=2.8 Score=45.10 Aligned_cols=71 Identities=21% Similarity=0.242 Sum_probs=40.3
Q ss_pred CEEEEEecCCCCCCCeEEEEec--cccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCceEEEEec-CC-CCCeeEEEEe
Q 008383 410 EYYYCALPKGPLVEDHVLVIPV--EHVPNTISTSPECEKELGRFQNSLMMYYKNQ-GKEAVFFEWL-SK-RGTHANLQAV 484 (567)
Q Consensus 410 ~~~yl~l~kgpl~~gH~LIiP~--~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~-g~~~v~~E~~-~~-~~~H~hi~~v 484 (567)
+...+++...|+.+||+||||- .|.+-..+. +.. .+ ++.-+.... ..-.|+|.-. +. ..-|+|+|..
T Consensus 169 s~~~VlINvsPI~~gH~LlvP~~~~~lPQ~i~~--~~l----~l--a~~~a~~~~~p~frvgYNSlGA~ASvNHLHFQa~ 240 (403)
T PLN03103 169 SPNVVAINVSPIEYGHVLLVPRVLDCLPQRIDP--DSF----LL--ALYMAAEANNPYFRVGYNSLGAFATINHLHFQAY 240 (403)
T ss_pred CccEEEEeCCCCccCeEEEcCCcccCCCeEecH--HHH----HH--HHHHHHhcCCCcEEEEecCCccccCcceeeeeec
Confidence 3346778899999999999964 677765542 222 11 111111112 2224667611 12 2469999987
Q ss_pred ecCc
Q 008383 485 PIPT 488 (567)
Q Consensus 485 Pvp~ 488 (567)
-.+.
T Consensus 241 yl~~ 244 (403)
T PLN03103 241 YLAN 244 (403)
T ss_pred ccCC
Confidence 6533
|
|
| >PF05011 DBR1: Lariat debranching enzyme, C-terminal domain; InterPro: IPR007708 This presumed domain is found at the C terminus of lariat debranching enzyme | Back alignment and domain information |
|---|
Probab=80.06 E-value=1.7 Score=40.40 Aligned_cols=30 Identities=20% Similarity=0.442 Sum_probs=26.2
Q ss_pred CcceeEEEEccCCCCcccceeEEEeccCCCCC
Q 008383 221 AVHVTRFLGLAPVGNKEKQKFIHALSPTPAAT 252 (567)
Q Consensus 221 ~~~~TRFI~L~~~g~~~K~Kw~yAf~i~p~~~ 252 (567)
....|||++|++|+. +++||..+.|.+...
T Consensus 6 ~~~~TkFLALDKClP--~R~FLqviei~~~~~ 35 (145)
T PF05011_consen 6 TNKTTKFLALDKCLP--RRDFLQVIEIPPDSS 35 (145)
T ss_pred CCCccEEEeccccCC--CCcceEEEEecCCCC
Confidence 567899999999998 788999999987664
|
This domain is always found in association with a metallo-phosphoesterase domain IPR004843 from INTERPRO. RNA lariat debranching enzyme is capable of digesting a variety of branched nucleic acid substrates and multicopy single-stranded DNAs. The enzyme degrades intron lariat structures during splicing. ; GO: 0016788 hydrolase activity, acting on ester bonds, 0006397 mRNA processing |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 567 | |||
| 1m9o_A | 77 | Tristetraproline; Cys3His type zinc finger, metal | 1e-12 | |
| 2rhk_C | 72 | Cleavage and polyadenylation specificity factor su | 1e-09 | |
| 2d9n_A | 77 | Cleavage and polyadenylation specificity factor, 3 | 1e-09 | |
| 2cqe_A | 98 | KIAA1064 protein; CCCH zinc-finger, structural gen | 9e-09 | |
| 2cqe_A | 98 | KIAA1064 protein; CCCH zinc-finger, structural gen | 4e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 | |
| 3ano_A | 218 | AP-4-A phosphorylase; diadenosine polyphosphate, H | 3e-06 | |
| 1fit_A | 147 | FragIle histidine protein; FHIT, fragIle histidine | 1e-05 |
| >1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A Length = 77 | Back alignment and structure |
|---|
Score = 62.7 bits (152), Expect = 1e-12
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRHDTDA------REQCLRGVCLDFIIKGKCEKGPECSYKH 367
++C + SG C G KC F H + +C F ++G+C G C + H
Sbjct: 13 ELCRTYSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFKLQGRCPYGSRCHFIH 72
Query: 368 SLQND 372
+ D
Sbjct: 73 NPTED 77
|
| >2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens} Length = 72 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 1e-09
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 301 SQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKG 360
H G+ +C ++ G C +G++C F H+ D + C + G+C
Sbjct: 4 HHHHHSHMSGEKTVVCKHWL-RGLCKKGDQCEFLHEYDMTKM---SECYFYSKFGEC-SN 58
Query: 361 PECSYKH 367
EC + H
Sbjct: 59 KECPFLH 65
|
| >2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 77 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 1e-09
Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 309 GGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHS 368
G+ +C ++ G C +G++C F H+ D + C + G+C EC + H
Sbjct: 6 SGEKTVVCKHWLR-GLCKKGDQCEFLHEYDMTKM---PECYFYSKFGEC-SNKECPFLHI 60
Query: 369 LQNDDSQ 375
+
Sbjct: 61 DPESKIK 67
|
| >2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1 Length = 98 | Back alignment and structure |
|---|
Score = 52.0 bits (124), Expect = 9e-09
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQNDD 373
++C KF +G C R E C + H C + G C G +C + H ++
Sbjct: 14 ELC-KFYITGFCARAENCPYMHGDF--------PCKLYHTTGNCINGDDCMFSHDPLTEE 64
Query: 374 SQ 375
++
Sbjct: 65 TR 66
|
| >2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1 Length = 98 | Back alignment and structure |
|---|
Score = 38.9 bits (90), Expect = 4e-04
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 312 GDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECS 364
GD C + +G+C G+ C F HD E LD ++ E G E
Sbjct: 35 GDFPCKLYHTTGNCINGDDCMFSHDPLTEETR---ELLDKMLADDAEAGAEDE 84
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 2e-06
Identities = 78/582 (13%), Positives = 148/582 (25%), Gaps = 198/582 (34%)
Query: 6 ILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFF-----PDSSELLDEF------- 53
I++ D + +LF + S + V +F + L+
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQEEM--------VQKFVEEVLRINYKFLMSPIKTEQRQP 105
Query: 54 ----MNYVEGRSEI-----PIPTYF----------------------IGDYGV-GAAK-V 80
Y+E R + Y + GV G+ K
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW 165
Query: 81 LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL---------SGRQSSEG 131
+ S KMD FK+ FWL N + L + S+
Sbjct: 166 VALDVCLSYKVQCKMD-FKI----FWLN-LKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219
Query: 132 QQFGTYSQDDV-DALRALAEEPGIVD--LFLTNEWPSGVTNKAAASD----MLVGISDSS 184
+ LR L + + L L N + N A + +L+
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN---AFNLSCKILLTTRFKQ 276
Query: 185 NTDSTVSELVAEIKPRYHIAG-----SKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQ 239
TD + I +H K + ++L P
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLL--------------LKYLDCRP------- 315
Query: 240 KFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYD 299
L P T + +S+ A+ D ++ W++
Sbjct: 316 ---QDL-PREVLTTNPRRLSI---------------------IAESIRDGLATWDNWKH- 349
Query: 300 VSQKRQKHGGGDGDKMCFKFIYSGSC-PRGEKCN-FRHDT------------DAREQCLR 345
V+ + + + ++ + F D + +
Sbjct: 350 VNCDKLTT----IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVM 405
Query: 346 GVCLDFIIKGKCEKGP-ECSYK-HSLQ------NDDSQRTHRS--ENASANRSKECWFCL 395
V EK P E + S+ ++ HRS ++ + ++ + L
Sbjct: 406 VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDD-L 464
Query: 396 SSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSL 455
P ++ Y+Y + H H+ N E
Sbjct: 465 IPPYLDQ--------YFYSHIG-------H-------HLKNI---------EHPERMTLF 493
Query: 456 MMYYKNQGKEAVFFEWLSKRGTHANLQAVPIPTSKAAAVQDI 497
M + + F +L ++ H + A S +Q +
Sbjct: 494 RMVFLD-------FRFLEQKIRHDST-AWNASGSILNTLQQL 527
|
| >3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis} Length = 218 | Back alignment and structure |
|---|
Score = 47.7 bits (113), Expect = 3e-06
Identities = 21/93 (22%), Positives = 30/93 (32%), Gaps = 13/93 (13%)
Query: 387 RSKECWFC-LSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECE 445
S F + S E L+V+ G+ Y L P H++V+P V +
Sbjct: 67 ASPAQPFTEIPQLSDEEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRRVSELEDLTDLES 126
Query: 446 KELGRFQNSLMMYYK------------NQGKEA 466
EL F + K N G A
Sbjct: 127 AELMAFTQKAIRVIKNVSRPHGFNVGLNLGTSA 159
|
| >1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A* Length = 147 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 1e-05
Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 14/89 (15%)
Query: 390 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELG 449
F ++ ++ E + + + P+V HVLV P+ V P+ +L
Sbjct: 2 SFRFG--QHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLF 59
Query: 450 RF----QNSLMMYYK--------NQGKEA 466
+ + ++ G EA
Sbjct: 60 QTTQRVGTVVEKHFHGTSLTFSMQDGPEA 88
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 567 | |||
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.78 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.71 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.71 | |
| 1y23_A | 145 | HIT, histidine triad protein; HIT protein, PKCI-1, | 99.59 | |
| 3n1s_A | 119 | HIT-like protein HINT; histidine triad nucleotide | 99.58 | |
| 3lb5_A | 161 | HIT-like protein involved in cell-cycle regulatio; | 99.58 | |
| 3o0m_A | 149 | HIT family protein; ssgcid, NIH, niaid, SBRI, UW, | 99.58 | |
| 3imi_A | 147 | HIT family protein; structural genomics, infectiou | 99.57 | |
| 2oik_A | 154 | Histidine triad (HIT) protein; HIT-like fold, stru | 99.56 | |
| 3p0t_A | 138 | Uncharacterized protein; ssgcid, HIT-like protein, | 99.56 | |
| 4egu_A | 119 | Histidine triad (HIT) protein; structural genomics | 99.55 | |
| 3oj7_A | 117 | Putative histidine triad family protein; hydrolase | 99.54 | |
| 3ano_A | 218 | AP-4-A phosphorylase; diadenosine polyphosphate, H | 99.54 | |
| 3l7x_A | 173 | SMU.412C, putative HIT-like protein involved in ce | 99.53 | |
| 2eo4_A | 149 | 150AA long hypothetical histidine triad nucleotid | 99.53 | |
| 3r6f_A | 135 | HIT family protein; structural genomics, seattle s | 99.53 | |
| 3o1c_A | 126 | Histidine triad nucleotide-binding protein 1; hydr | 99.51 | |
| 1xqu_A | 147 | HIT family hydrolase; protein STRU initiative, PSI | 99.49 | |
| 3ksv_A | 149 | Uncharacterized protein; HIT family, structural ge | 99.49 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.4 | |
| 1fit_A | 147 | FragIle histidine protein; FHIT, fragIle histidine | 99.33 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.3 | |
| 1ems_A | 440 | Nitfhit, NIT-fragIle histidine triad fusion protei | 99.23 | |
| 3ohe_A | 137 | Histidine triad (HIT) protein; structural genomics | 99.23 | |
| 3i24_A | 149 | HIT family hydrolase; structural genomics, PSI-2, | 99.21 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.09 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.05 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.04 | |
| 1z84_A | 351 | Galactose-1-phosphate uridyl transferase-like prot | 98.99 | |
| 3nrd_A | 135 | Histidine triad (HIT) protein; structural genomics | 98.96 | |
| 1gup_A | 348 | Galactose-1-phosphate uridylyltransferase; nucleot | 98.95 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 98.91 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 98.9 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 98.89 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 98.89 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 98.86 | |
| 3i4s_A | 149 | Histidine triad protein; hydrolase, phosphatase, H | 98.81 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 98.77 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 98.76 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 98.71 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 98.71 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 98.64 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.64 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 98.62 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.5 | |
| 3sp4_A | 204 | Aprataxin-like protein; HIT domain, zinc finger, D | 98.4 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.31 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 98.3 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.23 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 98.19 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 98.04 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.01 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 97.93 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.83 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.81 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 97.63 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 97.62 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 97.6 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 97.56 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 97.53 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 97.51 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 97.47 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 97.47 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 97.46 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 97.45 | |
| 1z84_A | 351 | Galactose-1-phosphate uridyl transferase-like prot | 97.4 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 97.37 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 97.24 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 97.2 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 96.95 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 96.76 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 96.5 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 96.48 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 96.4 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 96.21 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 95.41 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 95.13 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 95.11 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 93.36 | |
| 1m9o_A | 77 | Tristetraproline; Cys3His type zinc finger, metal | 92.92 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 92.75 | |
| 3bl9_A | 301 | Scavenger mRNA-decapping enzyme DCPS; ligand compl | 92.19 | |
| 1vlr_A | 350 | MRNA decapping enzyme; 16740816, structural genomi | 91.2 | |
| 3d2q_A | 70 | Muscleblind-like protein 1; tandem zinc finger dom | 86.4 | |
| 1gup_A | 348 | Galactose-1-phosphate uridylyltransferase; nucleot | 83.52 | |
| 2cqe_A | 98 | KIAA1064 protein; CCCH zinc-finger, structural gen | 83.24 | |
| 3d2n_A | 83 | Muscleblind-like protein 1; tandem zinc finger dom | 83.08 | |
| 2rpp_A | 89 | Muscleblind-like protein 2; zinc finger domain, C3 | 80.32 |
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-18 Score=177.17 Aligned_cols=205 Identities=14% Similarity=0.126 Sum_probs=132.2
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhcccCCCC-ccEEEEccCCCCh--H
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGRSEIP-IPTYFIGDYGVGA--A 78 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~-~~~~~~~~~l~g~~~~p-~ptyfv~GN~~~~--~ 78 (567)
.|||++++|+|++...+ ++ .+.|+||++||++.... .....+.+++ .+++ .++|+|.||||.. .
T Consensus 59 ~mri~~iSD~H~~~~~l-----~i----~~~D~vi~aGDl~~~g~~~e~~~~~~~L---~~l~~~~v~~V~GNHD~~~d~ 126 (296)
T 3rl5_A 59 HTRFVCISDTRSRTDGI-----QM----PYGDILLHTGDFTELGLPSEVKKFNDWL---GNLPYEYKIVIAGNHELTFDK 126 (296)
T ss_dssp EEEEEEEBCCTTCCTTC-----CC----CSCSEEEECSCCSSSCCHHHHHHHHHHH---HTSCCSEEEECCCTTCGGGCH
T ss_pred CeEEEEEeeCCCCcchh-----cc----CCCCEEEECCcccCCCCHHHHHHHHHHH---HhCCCCeEEEEcCCcccccch
Confidence 48999999999987632 11 25799999999986532 2223344444 4454 4599999999964 2
Q ss_pred HHHHHHhccccc--c---Ccc----cCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHH-HHHh
Q 008383 79 KVLLAASKNSAN--Q---GFK----MDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDA-LRAL 148 (567)
Q Consensus 79 ~~~~~l~~~~~~--~---~~~----~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~-L~~~ 148 (567)
.+++.+...... . ... .+...+..+++||.. ++++++|++|+|.+++ +..+.+.|.+++.+. +..+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~-~~~~i~Gl~i~Gsp~t---P~~~~~~f~~~~~~~~~~~~ 202 (296)
T 3rl5_A 127 EFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQD-SEVTVKGFRIYGAPWT---PWFNGWGFNLPRGQSLLDKW 202 (296)
T ss_dssp HHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSS-EEEEETTEEEEEECCB---CC--CCTTBCCTTHHHHHHH
T ss_pred hhhhhhhcccccccccccccccchhhhHhhhcCCeEEecC-CcEEECCEEEEEecCC---CCCCCcCCCcchHHHHHHHH
Confidence 344433100000 0 000 011234578899995 5668999999985553 333344554333333 3333
Q ss_pred hcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHH-HHhCCCEEEEccCCCccccccccCCCCcceeEE
Q 008383 149 AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELV-AEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRF 227 (567)
Q Consensus 149 ~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~-~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRF 227 (567)
.....++||||||.+|+++.+.... . ..++|+..+.+++ ++.+|+||++||.|..|... ....|.|
T Consensus 203 ~~ip~~~dILvTH~PP~g~~D~~~~----~---~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~------~~g~t~v 269 (296)
T 3rl5_A 203 NLIPEGTDILMTHGPPLGFRDWVPK----E---LQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM------TDGYTTY 269 (296)
T ss_dssp TTSCTTCSEEEESSCBTTSSCEEGG----G---TEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE------ECSSCEE
T ss_pred hhCCCCCeEEEECCCcccccccccc----c---cCcCChHHHHHHHHHhcCCCEEEECCccCCCceE------EECCEEE
Confidence 3445789999999999999764310 0 1368999999999 69999999999988654321 2457999
Q ss_pred EEccCCCCc
Q 008383 228 LGLAPVGNK 236 (567)
Q Consensus 228 I~L~~~g~~ 236 (567)
||.|.++..
T Consensus 270 vNpGs~~~~ 278 (296)
T 3rl5_A 270 INASTCTVS 278 (296)
T ss_dssp EECBCSCTT
T ss_pred EECCcCCcC
Confidence 999999863
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.71 E-value=5.6e-16 Score=154.01 Aligned_cols=205 Identities=13% Similarity=0.093 Sum_probs=129.7
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhh-------------------------HHHHHHHh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL-------------------------LDEFMNYV 57 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~-------------------------~~~~~~~l 57 (567)
.|||++++|+|++...+.+.++.++.. +.|+||++||++...... .+.+.+++
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~--~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l 82 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEK--QPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFF 82 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHH--CCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhc--CCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHH
Confidence 589999999999987665555655433 479999999998753220 02244444
Q ss_pred cccCCCCccEEEEccCCCChHHH--HHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCC
Q 008383 58 EGRSEIPIPTYFIGDYGVGAAKV--LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFG 135 (567)
Q Consensus 58 ~g~~~~p~ptyfv~GN~~~~~~~--~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~ 135 (567)
....+.++|+|+|+||||..... .+.+.. . .+.+|+.+|.....++++|++|.++++....+.-+..
T Consensus 83 ~~l~~~~~pv~~v~GNHD~~~~~~~~~~~~~---------~--~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 151 (260)
T 2yvt_A 83 REIGELGVKTFVVPGKNDAPLKIFLRAAYEA---------E--TAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEED 151 (260)
T ss_dssp HHHHTTCSEEEEECCTTSCCHHHHHHHHHHT---------T--TTCTTEEECSSEEEEETTTEEEEEECSEEESSCCBSS
T ss_pred HHHHhcCCcEEEEcCCCCchhhhhHHHHhhh---------c--cCCcceEEecCcceEEECCEEEEecCCCcCCCCcCHH
Confidence 44355678999999999975422 122221 1 1246778886432267899999999987532210001
Q ss_pred CCC----HHHHHHHHHhhcCCCCccEEEeCCCCccc-cccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCc
Q 008383 136 TYS----QDDVDALRALAEEPGIVDLFLTNEWPSGV-TNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVF 210 (567)
Q Consensus 136 ~~t----~~dv~~L~~~~~~~~~vDILLTh~wP~gI-~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f 210 (567)
... -...+.|..+.......+||+||.+|.+. .+.. +.. ....|+..+.++++..+|+++++||.|..
T Consensus 152 ~~~~~~~~~~~~~l~~l~~~~~~~~Il~~H~pp~~~~~d~~-----~~~--~~~~~~~~l~~~~~~~~~~~vl~GH~H~~ 224 (260)
T 2yvt_A 152 FVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFVDRT-----PED--PKHHGSAVVNTIIKSLNPEVAIVGHVGKG 224 (260)
T ss_dssp SSCEEEHHHHHHHGGGGGGSCCCEEEEEESSCCSCSSTTCB-----TTB--SCCCSCHHHHHHHHHHCCSEEEECSSCCE
T ss_pred HHhhcchhhHHHHHHHHHhcCCCCEEEEECCCccccccccC-----ccc--ccccCcHHHHHHHHHhCCCEEEECCccCC
Confidence 111 00002232222223457899999999875 2211 000 13679999999999999999999998832
Q ss_pred cccccccCCCCcceeEEEEccCCCC
Q 008383 211 YAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 211 yEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
.. ....|++||.|.++.
T Consensus 225 ~~--------~~~~~~~in~Gs~~~ 241 (260)
T 2yvt_A 225 HE--------LVGNTIVVNPGEFEE 241 (260)
T ss_dssp EE--------EETTEEEEECCBGGG
T ss_pred cE--------EeCCEEEEeCCCCCC
Confidence 21 123588999999864
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.7e-16 Score=153.88 Aligned_cols=196 Identities=16% Similarity=0.155 Sum_probs=124.9
Q ss_pred CC--CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChH
Q 008383 1 MS--PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAA 78 (567)
Q Consensus 1 M~--~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~ 78 (567)
|. +|||+++||+|++...+-+.++.+++. ++|+||++||++..... .+++.+++....+.+.|+|+|+||||...
T Consensus 1 ~~~~~mri~~iSD~H~~~~~~~~~~~~~~~~--~~D~vi~~GDl~~~~~~-~~~~~~~~~~l~~~~~pv~~v~GNHD~~~ 77 (228)
T 1uf3_A 1 MRRTVRYILATSNPMGDLEALEKFVKLAPDT--GADAIALIGNLMPKAAK-SRDYAAFFRILSEAHLPTAYVPGPQDAPI 77 (228)
T ss_dssp CCCCCCEEEEEECCTTCHHHHHHHHTHHHHH--TCSEEEEESCSSCTTCC-HHHHHHHHHHHGGGCSCEEEECCTTSCSH
T ss_pred CccceEEEEEEeeccCCHHHHHHHHHHHhhc--CCCEEEECCCCCCCCCC-HHHHHHHHHHHHhcCCcEEEECCCCCchh
Confidence 65 479999999999987655444444433 47999999999764311 22233333333456789999999999754
Q ss_pred HHHHHHhccccccCcccCCceecccEEEeCCCCeEEEc-CeEEEEEecccCCCCCCCCCCCHHHH--------HHHHH-h
Q 008383 79 KVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLH-GLSVAYLSGRQSSEGQQFGTYSQDDV--------DALRA-L 148 (567)
Q Consensus 79 ~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~-GlrIa~lgG~~~~~~~~~~~~t~~dv--------~~L~~-~ 148 (567)
. +.+... .....+.+++++|.. ..+++. |++|.+++|....+. .++++++ +.+.. +
T Consensus 78 ~--~~~~~~-------~~~~~~~~~~~~l~~-~~~~~~~~~~i~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l 143 (228)
T 1uf3_A 78 W--EYLREA-------ANVELVHPEMRNVHE-TFTFWRGPYLVAGVGGEIADEG----EPEEHEALRYPAWVAEYRLKAL 143 (228)
T ss_dssp H--HHHHHH-------HHHHHHCTTEEECBT-SEEEETTTEEEEEECSEEESSS----CCBSSSSCEEEHHHHHHHHGGG
T ss_pred H--HHHHhh-------hhhhccCcceEEccc-ceEeeCCCcEEecCCCCcCCCC----ccChhhcccchhhhHHHHHHHH
Confidence 2 222110 000112356677764 456777 999999998653221 1122111 11111 2
Q ss_pred hcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEE
Q 008383 149 AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFL 228 (567)
Q Consensus 149 ~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI 228 (567)
.......+|++||.+|.+. . ....|+..+.++++..+|+++|+||.|.... ....|++|
T Consensus 144 ~~~~~~~~il~~H~p~~~~----~---------~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~--------~~~~~~~i 202 (228)
T 1uf3_A 144 WELKDYPKIFLFHTMPYHK----G---------LNEQGSHEVAHLIKTHNPLLVLVAGKGQKHE--------MLGASWVV 202 (228)
T ss_dssp GGSCSCCEEEEESSCBCBT----T---------TBTTSBHHHHHHHHHHCCSEEEECCSSCEEE--------EETTEEEE
T ss_pred HhCCCCCeEEEEccCcccC----C---------ccccCHHHHHHHHHHhCCCEEEEcccccCcc--------ccCCceEE
Confidence 2222458999999999875 1 0246889999999999999999999883321 13468999
Q ss_pred EccCCC
Q 008383 229 GLAPVG 234 (567)
Q Consensus 229 ~L~~~g 234 (567)
|.|+++
T Consensus 203 n~Gs~~ 208 (228)
T 1uf3_A 203 VPGDLS 208 (228)
T ss_dssp ECCBGG
T ss_pred EecccC
Confidence 999986
|
| >1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=7.7e-16 Score=141.15 Aligned_cols=101 Identities=18% Similarity=0.220 Sum_probs=79.5
Q ss_pred CCCCccccCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHH----HHhc
Q 008383 388 SKECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMY----YKNQ 462 (567)
Q Consensus 388 ~~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~----~~~~ 462 (567)
+++|+||.+. ...+ ..||++++.+++++++.|..+||+||||++|++++.+|+++++.+|....+.+.+. |...
T Consensus 4 ~~~C~fC~i~~~e~~-~~iv~e~~~~~a~~~~~p~~pgh~LViPk~h~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~ 82 (145)
T 1y23_A 4 AENCIFCKIIAGDIP-SAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPI 82 (145)
T ss_dssp -CCCHHHHHHHTSSC-CCEEEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHCCS
T ss_pred CCCCcCCccccCCCC-CCEEEECCCEEEEECCCCCCCCeEEEEEhhhhhhHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4689999854 3333 47899999999999999999999999999999999999999988887665555544 4445
Q ss_pred CCceEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 463 GKEAVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 463 g~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
|+.+++.. ..++...|+|+|+||+...
T Consensus 83 ~~ni~~n~g~~~g~~v~HlH~HiiPr~~~ 111 (145)
T 1y23_A 83 GLNTLNNNGEKAGQSVFHYHMHIIPRYGK 111 (145)
T ss_dssp EEEEEEEESGGGTCCSSSCCEEEEEECST
T ss_pred CEEEEEcCCcCCCCCcCEEEEEEEccccC
Confidence 66666665 2334468999999998754
|
| >3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.8e-15 Score=134.27 Aligned_cols=98 Identities=18% Similarity=0.194 Sum_probs=77.1
Q ss_pred CCCccccCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-----c
Q 008383 389 KECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-----Q 462 (567)
Q Consensus 389 ~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-----~ 462 (567)
++|.||.+. .+.+ ..||++++.++++++..|.+|||+||||++|++++.+++++.+.++.++.+..++..++ .
T Consensus 3 ~~CiFC~I~~ge~~-~~iv~ede~~~af~d~~P~~pgH~LViPk~Hv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~~ 81 (119)
T 3n1s_A 3 EETIFSKIIRREIP-SDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAED 81 (119)
T ss_dssp CCCHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHTTCTTT
T ss_pred CCChhhhhhcCCCc-CCEEEECCCEEEEECCCCCCCCeEEEEehhHhCCHhHcCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 589999753 3344 56999999999999999999999999999999999999999777777666555555443 3
Q ss_pred CCceEEEE--ecCCCCCeeEEEEeecC
Q 008383 463 GKEAVFFE--WLSKRGTHANLQAVPIP 487 (567)
Q Consensus 463 g~~~v~~E--~~~~~~~H~hi~~vPvp 487 (567)
|+++++.. .+++...|+|+|+||+.
T Consensus 82 g~ni~~n~g~~agq~V~HlH~Hiipr~ 108 (119)
T 3n1s_A 82 GYRLIMNTNRHGGQEVYHIHMHLLGGR 108 (119)
T ss_dssp CEEEEEEEHHHHTCCSSSCCEEEEESS
T ss_pred CeEEEEeCCCCcCCCcCEEEEEEeCCc
Confidence 55555544 23455789999999974
|
| >3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=99.58 E-value=3.7e-15 Score=139.20 Aligned_cols=103 Identities=14% Similarity=0.117 Sum_probs=82.4
Q ss_pred CCCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHH----HHhc
Q 008383 387 RSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMY----YKNQ 462 (567)
Q Consensus 387 ~~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~----~~~~ 462 (567)
..++|+||.+........||++++++++++|..|..+||+||||++|+.++.+++++++.+|....+.+.+. |...
T Consensus 26 ~~~~CiFC~i~~~e~p~~iV~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~ 105 (161)
T 3lb5_A 26 YDNNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQAD 105 (161)
T ss_dssp CCTTSHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSTTTSCHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred CCCCCcccccccCCCCccEEEECCCEEEEECCCcCCCcEEEEEEeeccchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 357899998654333467999999999999999999999999999999999999999999888777666555 4455
Q ss_pred CCceEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 463 GKEAVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 463 g~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
|++++++. ..++...|+|+|+||+...
T Consensus 106 g~ni~~n~g~~aGq~V~HlHiHiiPR~~~ 134 (161)
T 3lb5_A 106 GITVMQFNEAASQQTVYHLHFHIIPRMEG 134 (161)
T ss_dssp EEEEEEEESGGGTCCSCSCCEEEEEECTT
T ss_pred CEEEEEecCcccCCCCCEEEEEEEcccCC
Confidence 66666555 2334468999999998654
|
| >3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.5e-15 Score=138.55 Aligned_cols=102 Identities=20% Similarity=0.279 Sum_probs=80.6
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhc--CC-
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ--GK- 464 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~--g~- 464 (567)
+++|.||.+........||+++++++++++..|..+||+||||++|+.++.+++++++.+|....+.+.+.+++. +.
T Consensus 4 m~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~ 83 (149)
T 3o0m_A 4 SMSCVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMAAVGQRIARAARESGLHAD 83 (149)
T ss_dssp TTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCCSTTTSCHHHHHHHHHHHHHHHHHHHHSTTCCS
T ss_pred CCCCccCccccCCCCCCEEEECCCEEEEEcCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 568999975433223579999999999999999999999999999999999999999999999988888777654 22
Q ss_pred --ceEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 465 --EAVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 465 --~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
++++.. ..++...|+|+|+||+...
T Consensus 84 ~~ni~~n~g~~aGq~v~HlHiHiiPR~~~ 112 (149)
T 3o0m_A 84 GNNIAINDGKAAFQTVFHIHLHVVPRRNG 112 (149)
T ss_dssp EEEEECCCSGGGTCCSSSCCEEEEEECTT
T ss_pred ceEEEEecCCCCCCccceEEEEEECCccC
Confidence 222221 1233468999999998654
|
| >3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.5e-15 Score=138.23 Aligned_cols=103 Identities=18% Similarity=0.197 Sum_probs=81.8
Q ss_pred CCCCCCccccCCC-CCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH----
Q 008383 386 NRSKECWFCLSSP-SVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK---- 460 (567)
Q Consensus 386 ~~~~~C~FC~~~~-~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~---- 460 (567)
...++|.||.+.. ..+ ..||+++++++++++..|..|||+||||++|+.++.+++++++.+|....+.+.+.+.
T Consensus 6 ~~m~~CifC~i~~~e~~-~~iV~e~~~~~a~~d~~p~~pgh~lViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~ 84 (147)
T 3imi_A 6 HTADNCIFCKIIDGQIL-CSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEFN 84 (147)
T ss_dssp CCGGGCHHHHHHTTSSC-CCEEEECSSEEEEECTTCSSTTCEEEEESSCCCSGGGCCHHHHHHHHHTHHHHHHHHHHHHC
T ss_pred cccCCCcCcccccCCCc-CCEEEECCCEEEEEcCCCCCCcEEEEEEeeccCChhhCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3467899997543 344 4699999999999999999999999999999999999999999998877666665543
Q ss_pred hcCCceEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 461 NQGKEAVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 461 ~~g~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
..|+.+++.. ..++...|+|+|+||+...
T Consensus 85 ~~~~ni~~n~g~~aGq~v~HlHiHiiPR~~~ 115 (147)
T 3imi_A 85 PVGFNLLNNNGEKAGQTVFHFHLHLIPRYGE 115 (147)
T ss_dssp CSEEEEEEEESGGGTCCSSSCCEEEEEECST
T ss_pred CCCEEEEEeCCcccCCCcCEEEEEEeCCccC
Confidence 4556655554 2344478999999999763
|
| >2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-14 Score=134.22 Aligned_cols=98 Identities=13% Similarity=0.113 Sum_probs=77.8
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCce
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEA 466 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~~~ 466 (567)
.++|+||... ...||+++++++++++..|..+||+||||++|+.++.+++++++.+|....+.+.+.+.+ .+..-
T Consensus 9 ~~~C~FC~~~----~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~g 84 (154)
T 2oik_A 9 HKNCELCTTA----GGEILWQDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMRPDK 84 (154)
T ss_dssp CTTCHHHHSC----CSEEEEECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSE
T ss_pred CCCCccCCCC----CCeEEEECCcEEEEEcCCCCCCeEEEEEecCCcCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 4579999754 357999999999999999999999999999999999999999999888777666666553 23332
Q ss_pred EEEEecCCCCCeeEEEEeecCcc
Q 008383 467 VFFEWLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 467 v~~E~~~~~~~H~hi~~vPvp~~ 489 (567)
+.+...++...|+|+|+||+...
T Consensus 85 ~ni~~~gq~v~HlHiHiiPr~~~ 107 (154)
T 2oik_A 85 INLASLGNMTPHVHWHVIPRFKR 107 (154)
T ss_dssp EEEEECCSSSCSCEEEEEEECTT
T ss_pred EEhHHhCCCCCEEEEEEeCCCCC
Confidence 22332445578999999998764
|
| >3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.56 E-value=6.4e-15 Score=133.99 Aligned_cols=100 Identities=13% Similarity=0.067 Sum_probs=81.1
Q ss_pred CCCccccCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCce
Q 008383 389 KECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEA 466 (567)
Q Consensus 389 ~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~~~ 466 (567)
.+|.||.+. .+.+ ..||+++++++++++..|.++||+||||++|+.++.+++++++.+|....+.+.+.+.+ .+..-
T Consensus 5 ~~CiFC~i~~~e~p-~~iV~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~ 83 (138)
T 3p0t_A 5 MASIFTKIINRELP-GRFVYEDDDVVAFLTIEPMTQGHTLVVPREEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFRTER 83 (138)
T ss_dssp HHHHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSE
T ss_pred CCChhhHHhcCCCC-cCEEEeCCCEEEEecCCCCCCcEEEEEEhHHhCchhhCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 469999743 3444 45899999999999999999999999999999999999999999999888777766543 45554
Q ss_pred EEEEecCCCCCeeEEEEeecCcc
Q 008383 467 VFFEWLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 467 v~~E~~~~~~~H~hi~~vPvp~~ 489 (567)
+.+...++...|+|+|+||+...
T Consensus 84 ~n~~~~gq~v~HlH~HiiPr~~~ 106 (138)
T 3p0t_A 84 SGLIIAGLEVPHLHVHVFPTRSL 106 (138)
T ss_dssp EEEEECCSSCSSCCEEEEEESCG
T ss_pred CcEEECCcccCEEEEEEeccccC
Confidence 55553445578999999998653
|
| >4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.8e-15 Score=131.32 Aligned_cols=100 Identities=14% Similarity=0.127 Sum_probs=75.3
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH-----hc
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK-----NQ 462 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~-----~~ 462 (567)
..+|.||.+........||+++++++++++..|.++||+||||++|++++.+++++.+.++..+.+.+.++.+ ..
T Consensus 3 ~~~C~FC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~~~~~~~~~~~~~~ 82 (119)
T 4egu_A 3 RMDCIFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKIAKEKGFDQT 82 (119)
T ss_dssp CTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGSCGGGTHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCCccCeecccCCCCCCEEEECCCEEEEECCCCCCCceEEEEechhhCCHhHCCHhHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3579999754332235799999999999999999999999999999999999998866666555544444333 44
Q ss_pred CCceEEEE--ecCCCCCeeEEEEeecC
Q 008383 463 GKEAVFFE--WLSKRGTHANLQAVPIP 487 (567)
Q Consensus 463 g~~~v~~E--~~~~~~~H~hi~~vPvp 487 (567)
|+.+++.. .+++...|+|+|+||+.
T Consensus 83 ~~ni~~n~g~~agq~v~HlH~Hiip~~ 109 (119)
T 4egu_A 83 GFRVINNCGSDGGQEVKHLHYHILAGK 109 (119)
T ss_dssp CEEEEEEETTTTTCCSCSCCEEEEESS
T ss_pred CEEEEEeCCCCCCCCcCEEEEEEeCCc
Confidence 66666554 23344689999999974
|
| >3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=3.2e-15 Score=132.12 Aligned_cols=100 Identities=19% Similarity=0.248 Sum_probs=73.9
Q ss_pred CCC-CccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---cC
Q 008383 388 SKE-CWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN---QG 463 (567)
Q Consensus 388 ~~~-C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~---~g 463 (567)
+++ |.||..........||+++++++++++..|..+||+||||++|+.++.++++++++++....+.++++.+. .|
T Consensus 5 m~~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~g 84 (117)
T 3oj7_A 5 MADSCIFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVSLIGKKECPEG 84 (117)
T ss_dssp ----CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCTTTHHHHHHHHHHHHHHHHHHCTTC
T ss_pred cCCCCcccccccCCCCCCEEEECCcEEEEECCCCCCCceEEEEechHhCCHHHCCHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 344 99998643323467999999999999999999999999999999999999988777777776655555443 24
Q ss_pred CceEEEE--ecCCCCCeeEEEEeecC
Q 008383 464 KEAVFFE--WLSKRGTHANLQAVPIP 487 (567)
Q Consensus 464 ~~~v~~E--~~~~~~~H~hi~~vPvp 487 (567)
+.+++.. .+++...|+|+|+||+-
T Consensus 85 ~ni~~n~g~~agq~v~H~H~Hiipr~ 110 (117)
T 3oj7_A 85 YRVVNNIGEDAGQTVKHIHFHILGGK 110 (117)
T ss_dssp EEEECCCSTTTTCCSSSCCEEEEESS
T ss_pred eEEEEcCCCCCCeeeeEEEEEEeCCC
Confidence 4443322 12333689999999973
|
| >3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.54 E-value=5.9e-15 Score=144.05 Aligned_cols=103 Identities=21% Similarity=0.185 Sum_probs=81.8
Q ss_pred CCCCccccCCCC-CCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----c
Q 008383 388 SKECWFCLSSPS-VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----Q 462 (567)
Q Consensus 388 ~~~C~FC~~~~~-~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~----~ 462 (567)
.++|+||.+... .....||++++.++++++..|.++||+||||++|+.++.+|+++++.+|..+.+.+.+.+++ .
T Consensus 68 ~~~CiFC~i~~~e~~~~~iV~edd~~~afld~~P~~pGH~LVIPkrHv~~l~dL~~ee~~~L~~l~~~v~~~l~~~~~~~ 147 (218)
T 3ano_A 68 SPAQPFTEIPQLSDEEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRRVSELEDLTDLESAELMAFTQKAIRVIKNVSRPH 147 (218)
T ss_dssp --CCHHHHGGGSCHHHHTEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHCCCS
T ss_pred CCCCcCcccccCCCCCceEEEECCcEEEEEccCCCCCcEEEEEechhhCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 457999986543 24567999999999999999999999999999999999999999999999887776666554 4
Q ss_pred CCceEEEE--ecCCCC-CeeEEEEeecCcch
Q 008383 463 GKEAVFFE--WLSKRG-THANLQAVPIPTSK 490 (567)
Q Consensus 463 g~~~v~~E--~~~~~~-~H~hi~~vPvp~~~ 490 (567)
|+.++++. ..++.. .|+|+|+||+...-
T Consensus 148 g~ni~~n~G~~aGq~V~~HlHiHIIPR~~gd 178 (218)
T 3ano_A 148 GFNVGLNLGTSAGGSLAEHLHVHVVPRWGGD 178 (218)
T ss_dssp EEEEEEEESGGGTCTTTTSCCEEEEEECTTG
T ss_pred CEEEEEecCcccCCcccCEEEEEEEcccCCC
Confidence 55555554 223345 89999999987653
|
| >3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.53 E-value=6.3e-15 Score=139.13 Aligned_cols=103 Identities=21% Similarity=0.201 Sum_probs=80.3
Q ss_pred CCCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHH----HHhc
Q 008383 387 RSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMY----YKNQ 462 (567)
Q Consensus 387 ~~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~----~~~~ 462 (567)
..++|+||.+........||++++.+++++|..|..|||+||||++|+.++.+++++++.+|....+.+.+. |...
T Consensus 34 ~m~~CiFC~Ii~~e~p~~iV~e~e~~~afld~~P~~pgH~LVIPkrHv~~l~dL~~ee~~~L~~~~~~v~~~l~~~~~~~ 113 (173)
T 3l7x_A 34 SMNDCLFCKIVAGDIPSSKVYEDEDVLAFLDISQATKGHTLVIPKEHVRNALEMTQTQAANLFARIPKIARALQKATKAD 113 (173)
T ss_dssp CCTTCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHTHHHHHHHHHHHHTCS
T ss_pred CCCCCcccccccCCCCceEEEECCCEEEEEcCCCCCCcEEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 367899998643322356999999999999999999999999999999999999999998888776555544 4445
Q ss_pred CCceEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 463 GKEAVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 463 g~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
|+++++.. ..++...|+|+|+||+...
T Consensus 114 g~ni~~n~g~~aGq~V~HlHiHiIPR~~~ 142 (173)
T 3l7x_A 114 GLNIINNNEETAGQTVFHAHVHLVPRFAD 142 (173)
T ss_dssp EEEEEECCSGGGTCCSCSCCEEEEEECC-
T ss_pred CEEEEEecCcccCCCcCEEEEEEEecccC
Confidence 55655444 2334468999999998653
|
| >2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.53 E-value=4.9e-15 Score=136.55 Aligned_cols=98 Identities=22% Similarity=0.289 Sum_probs=77.6
Q ss_pred CccccCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----cCCc
Q 008383 391 CWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGKE 465 (567)
Q Consensus 391 C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~----~g~~ 465 (567)
|+||.+. ...+ ..||++++.++++++..|..+||+||||++|+.++.+++++++.+|....+.+.+.+.+ .|+.
T Consensus 1 CiFC~i~~~e~~-~~iv~e~~~~~a~~d~~p~~pgh~lViPk~H~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~n 79 (149)
T 2eo4_A 1 CTFCSIINRELE-GYFVYEDEKFAAILDKYPVSLGHTLVIPKKHFENYLEADEDTLAELAKVVKLVSLGIKDAVKADGLR 79 (149)
T ss_dssp CHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred CcCcccccCCCC-ccEEEECCCEEEEECCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHhcCCCCeE
Confidence 9999754 3343 47899999999999999999999999999999999999999999999887766666553 3444
Q ss_pred eEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 466 AVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 466 ~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
+++.. ..++...|+|+|+||+...
T Consensus 80 i~~n~g~~~gq~v~HlHiHviPr~~~ 105 (149)
T 2eo4_A 80 LLTNIGRSAGQVIFHLHVHIIPTWEG 105 (149)
T ss_dssp EECCCSGGGTCCSCSCCEEEEEECSS
T ss_pred EEEecCcCCCCCcCEEEEEEECCcCC
Confidence 44333 1233468999999998644
|
| >3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.5e-15 Score=137.77 Aligned_cols=100 Identities=18% Similarity=0.260 Sum_probs=81.4
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCceE
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAV 467 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~g~~~v 467 (567)
.++|.||.+.. ....||+++++++++++..|..+||+||||++|+.++.+++++++.+|....+.+.+.+...++.++
T Consensus 5 ~~~C~fC~i~~--~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~~~~~~~ni~ 82 (135)
T 3r6f_A 5 MEGCIFCTLYR--KGANIIYETDRLFALIDRYPLSKGHFLVIPKAHHPYLHNYKPEELSGVLDTIRHLVQKFGFERYNIL 82 (135)
T ss_dssp -CCCHHHHHHH--HCCSCCEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCGGGGTTHHHHHHHHHHHHTCCSEEEE
T ss_pred CCCCcCccccc--CCceEEEECCCEEEEECCCCCCCCeEEEEEhhHhCCHhHCCHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 56899998643 2346899999999999999999999999999999999999999999999988888888776665544
Q ss_pred EEEecCCCCCeeEEEEeecCcc
Q 008383 468 FFEWLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 468 ~~E~~~~~~~H~hi~~vPvp~~ 489 (567)
+....++...|+|+|+||+...
T Consensus 83 ~n~g~gq~v~HlH~HiiPR~~~ 104 (135)
T 3r6f_A 83 QNNGNHQEVFHVHFHVIPFVSA 104 (135)
T ss_dssp CCSSSSCSSSSCCEEEEECCBT
T ss_pred EEcCCCCCccEEEEEEeccccC
Confidence 3321223368999999999764
|
| >3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A | Back alignment and structure |
|---|
Probab=99.51 E-value=8.3e-15 Score=131.24 Aligned_cols=99 Identities=17% Similarity=0.119 Sum_probs=75.6
Q ss_pred CCCCCccccCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----
Q 008383 387 RSKECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN---- 461 (567)
Q Consensus 387 ~~~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~---- 461 (567)
..++|.||... .+.+ ..||+++++++++++..|..+||+||||++|+.++.+++++.+.++..+.+.++++.+.
T Consensus 13 ~~~~CiFC~i~~~e~~-~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~ 91 (126)
T 3o1c_A 13 PGGDTIFGKIIRKEIP-AKIIFEDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLK 91 (126)
T ss_dssp TTCSSHHHHHHHTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCCCGGGCCGGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCCCCCcchhhcCCCc-CCEEEECCCEEEEECCCCCCCceEEEEechHhchHhhCchhHHHHHHHHHHHHHHHHHHhCCC
Confidence 35689999753 3344 47999999999999999999999999999999999999988777777666555554443
Q ss_pred cCCceEEEE--ecCCCCCeeEEEEeec
Q 008383 462 QGKEAVFFE--WLSKRGTHANLQAVPI 486 (567)
Q Consensus 462 ~g~~~v~~E--~~~~~~~H~hi~~vPv 486 (567)
.|+++++.. .+++...|+|+|+||+
T Consensus 92 ~g~ni~~n~g~~agq~v~HlH~Hiipr 118 (126)
T 3o1c_A 92 KGYRMVVNEGSDGGQSVYHVHLHVLGG 118 (126)
T ss_dssp TCEEEECCCHHHHTCCSSSCCEEEEES
T ss_pred CCeEEEEecCCccCCccCEeEEEEeCC
Confidence 344444332 2234478999999997
|
| >1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1 | Back alignment and structure |
|---|
Probab=99.49 E-value=1.1e-14 Score=133.84 Aligned_cols=100 Identities=17% Similarity=0.128 Sum_probs=77.0
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQG---- 463 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~g---- 463 (567)
.++|+||.+........||++++++++++|+.|..+||+||||++|++++.+++++.++++..+.+.++++.+..+
T Consensus 34 m~~CiFC~ii~~e~~~~iV~e~e~~~af~d~~P~~pgH~LViPkrHv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~~ 113 (147)
T 1xqu_A 34 LENCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILIDIHKAANKVAEDLGIAEK 113 (147)
T ss_dssp CTTCHHHHHHTTSSCBCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cCCCcccccccCCCCcEEEEECCcEEEEEecCCCCccEEEEEeCcccCChhHCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 4689999854332245799999999999999999999999999999999999998887788777776666666543
Q ss_pred -CceEEEE--ecCCCCCeeEEEEeecC
Q 008383 464 -KEAVFFE--WLSKRGTHANLQAVPIP 487 (567)
Q Consensus 464 -~~~v~~E--~~~~~~~H~hi~~vPvp 487 (567)
+.+++.. ...+...|+|+|+||+.
T Consensus 114 gyni~~n~g~~aGq~v~HlHlHiiP~~ 140 (147)
T 1xqu_A 114 GYRLITNCGVAAGQTVFHLHYHLLGGV 140 (147)
T ss_dssp CEEEECCCSTTTTCCSCSCCEEEEESS
T ss_pred CEEEEEecCcccCCCccEEEEEEeCCC
Confidence 3333222 12233689999999974
|
| >3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0 | Back alignment and structure |
|---|
Probab=99.49 E-value=2.6e-14 Score=131.78 Aligned_cols=101 Identities=17% Similarity=0.224 Sum_probs=81.1
Q ss_pred CCCCccccCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-c---
Q 008383 388 SKECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-Q--- 462 (567)
Q Consensus 388 ~~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~--- 462 (567)
..+|.||.+- .+++ ..+|++++.+++++|..|..+||+||||++|+.++.+++++++.+|....+.+.+.+.. .
T Consensus 10 ~~~~iFc~Ii~geip-~~iV~ed~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~ 88 (149)
T 3ksv_A 10 AANCIFCKIIKGDIP-CAKVAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVGVLLAKASRAVAGPDGSM 88 (149)
T ss_dssp CTTCHHHHHHHTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHCTTSCC
T ss_pred cccCHHHHHHcCCCC-ccEEEECCCEEEEECCCCCCCCEEEEEeChhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 4589999754 4455 46899999999999999999999999999999999999999999999988888877664 2
Q ss_pred CCceEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 463 GKEAVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 463 g~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
|+++++.. ..++...|+|+|+||+...
T Consensus 89 g~ni~~n~g~~aGq~v~HlHiHiiPR~~~ 117 (149)
T 3ksv_A 89 QYNVLQNNGSLAHQEVPHVHFHIIPKTDE 117 (149)
T ss_dssp EEEEEECCSTTTTCCSSSCCEEEEEECCT
T ss_pred CEEEEEecCcccCCCCCEEEEEEEecccC
Confidence 33433332 1233468999999999765
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.40 E-value=1.3e-11 Score=122.89 Aligned_cols=201 Identities=11% Similarity=0.032 Sum_probs=122.2
Q ss_pred CEEEEEcCCCCCH------------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChh-hHHHHHHHhcccCCCCccEEEE
Q 008383 4 PRILLCGDVLGRL------------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-LLDEFMNYVEGRSEIPIPTYFI 70 (567)
Q Consensus 4 ~KILv~GDvhG~~------------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~-~~~~~~~~l~g~~~~p~ptyfv 70 (567)
|||++++|+|++. ..+-+.++.+++...+.|+||++||++..... ....+.+++ ..+++|+|++
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l---~~l~~p~~~v 77 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQIL---GSLNYPLYLI 77 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHH---TTCSSCEEEE
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHH---HhcCCCEEEE
Confidence 7999999999984 44444455555443358999999999764322 122344444 5567899999
Q ss_pred ccCCCChHHHHHHHhccccccCcccCCceecccEEEeCC-CCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHh-
Q 008383 71 GDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKG-SGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRAL- 148 (567)
Q Consensus 71 ~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~-~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~- 148 (567)
.||||....+...+... + . .+..|. +. .-++..+|++|.+|...... .....+++++++.|.+.
T Consensus 78 ~GNHD~~~~~~~~~~~~-~----~----~~~~~~---~~~~~~~~~~~~~~i~ld~~~~~--~~~~~~~~~~~~wl~~~l 143 (274)
T 3d03_A 78 PGNHDDKALFLEYLQPL-C----P----QLGSDA---NNMRCAVDDFATRLLFIDSSRAG--TSKGWLTDETISWLEAQL 143 (274)
T ss_dssp CCTTSCHHHHHHHHGGG-S----G----GGCSCG---GGCCEEECSSSSEEEECCCCCTT--CSSBCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhhhh-h----c----CcccCC---CceEEEEEeCCEEEEEEeCCCCC--CCCCeeCHHHHHHHHHHH
Confidence 99999765443333210 0 0 000000 00 01223568999988765432 12345677777776653
Q ss_pred hcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeEE
Q 008383 149 AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRF 227 (567)
Q Consensus 149 ~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~fyEr~Py~~~~~~~~TRF 227 (567)
........|+++|.+|......... . ....+...+.+++++. ++.++|+||.|..+... . ...+-+
T Consensus 144 ~~~~~~~~iv~~H~p~~~~~~~~~~-----~--~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~---~---~g~~~~ 210 (274)
T 3d03_A 144 FEGGDKPATIFMHHPPLPLGNAQMD-----P--IACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ---Y---RQALIS 210 (274)
T ss_dssp HHHTTSCEEEEESSCSSCCSCTTTG-----G--GSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE---E---TTEEEE
T ss_pred HhCCCCCEEEEECCCCcccCCcccC-----c--ccCcCHHHHHHHHHhCCCceEEEeCCCCCchhhe---E---CCEEEE
Confidence 2223457899999999865321100 0 0134678899999988 79999999988754331 1 224566
Q ss_pred EEccCCC
Q 008383 228 LGLAPVG 234 (567)
Q Consensus 228 I~L~~~g 234 (567)
++.|..+
T Consensus 211 ~~pg~~~ 217 (274)
T 3d03_A 211 TLPGTVH 217 (274)
T ss_dssp ECCCSSC
T ss_pred EcCCcce
Confidence 7777665
|
| >1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2.3e-12 Score=118.32 Aligned_cols=90 Identities=14% Similarity=0.220 Sum_probs=72.8
Q ss_pred CCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----cCCceEEEE--ecC
Q 008383 400 VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGKEAVFFE--WLS 473 (567)
Q Consensus 400 ~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~----~g~~~v~~E--~~~ 473 (567)
++...||++++.++++++..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+.. .|+.+++.. ..+
T Consensus 10 ip~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~ag 89 (147)
T 1fit_A 10 IKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAG 89 (147)
T ss_dssp ECGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSGGGT
T ss_pred cCCcEEEEECCCEEEEECCCCCCCcEEEEEEccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCCccC
Confidence 45677999999999999999999999999999999999999999999998877777666553 344444333 123
Q ss_pred CCCCeeEEEEeecCcc
Q 008383 474 KRGTHANLQAVPIPTS 489 (567)
Q Consensus 474 ~~~~H~hi~~vPvp~~ 489 (567)
+...|+|+|+||+...
T Consensus 90 q~v~HlH~HiiPr~~~ 105 (147)
T 1fit_A 90 QTVKHVHVHVLPRKAG 105 (147)
T ss_dssp CCSSSCCEEEEEECTT
T ss_pred CCccEEEEEEECCcCC
Confidence 4468999999998764
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.30 E-value=5.2e-11 Score=121.92 Aligned_cols=201 Identities=10% Similarity=0.006 Sum_probs=125.7
Q ss_pred CCEEEEEcCCCCC------------HHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhccc-CCCCccEE
Q 008383 3 PPRILLCGDVLGR------------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGR-SEIPIPTY 68 (567)
Q Consensus 3 ~~KILv~GDvhG~------------~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~-~~~~~~~~~l~g~-~~~p~pty 68 (567)
+|||++++|+|.. ...+-+.++.+++.....|+||++||++.... .....+.+++... ...++|+|
T Consensus 25 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~pv~ 104 (330)
T 3ib7_A 25 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELV 104 (330)
T ss_dssp SEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCCEE
Confidence 6899999999962 44444445555542335899999999987532 2222344444221 12468999
Q ss_pred EEccCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHh
Q 008383 69 FIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRAL 148 (567)
Q Consensus 69 fv~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~ 148 (567)
++.||||....+...+... .. ..+ ...-++.++|++|.+|.+.... .....+.+++++.|...
T Consensus 105 ~v~GNHD~~~~~~~~~~~~---------~~--~~~----~~~~~~~~~~~~~i~lds~~~~--~~~~~~~~~q~~wl~~~ 167 (330)
T 3ib7_A 105 WVMGNHDDRAELRKFLLDE---------AP--SMA----PLDRVCMIDGLRIIVLDTSVPG--HHHGEIRASQLGWLAEE 167 (330)
T ss_dssp ECCCTTSCHHHHHHHHHCC---------CC--CCS----CCCEEEEETTEEEEECCCCCTT--CCSBCCCHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHhccc---------cc--ccC----CcceEEEeCCEEEEEecCCCCC--CCCCccCHHHHHHHHHH
Confidence 9999999765544444311 00 000 0123456789999988776431 22345678888888764
Q ss_pred h-cCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEE
Q 008383 149 A-EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRF 227 (567)
Q Consensus 149 ~-~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRF 227 (567)
. .......|+++|.+|......... . ....+...+.++++..+++++|+||.|..+... ...+.+
T Consensus 168 l~~~~~~~~iv~~Hh~p~~~~~~~~~-----~--~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~-------~~g~~~ 233 (330)
T 3ib7_A 168 LATPAPDGTILALHHPPIPSVLDMAV-----T--VELRDQAALGRVLRGTDVRAILAGHLHYSTNAT-------FVGIPV 233 (330)
T ss_dssp TTSCCTTCEEEECSSCSSCCSSGGGG-----G--GSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE-------ETTEEE
T ss_pred HHhcccCCeEEEEECCCCCCCccccc-----c--ccccCHHHHHHHHhccCceEEEECCCCCcccce-------ECCEEE
Confidence 3 223344799999999875321110 0 123567889999999999999999988764321 224677
Q ss_pred EEccCCC
Q 008383 228 LGLAPVG 234 (567)
Q Consensus 228 I~L~~~g 234 (567)
++.+..+
T Consensus 234 ~~~gs~~ 240 (330)
T 3ib7_A 234 SVASATC 240 (330)
T ss_dssp EECCCSS
T ss_pred EecCcce
Confidence 7777665
|
| >1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=9.5e-12 Score=133.98 Aligned_cols=100 Identities=13% Similarity=0.152 Sum_probs=79.5
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cC---
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QG--- 463 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g--- 463 (567)
.+.|.||. ..++...||+++++++++++..|..+||+||||++|+.++.+++++++.+|....+.+.+.+.+ .+
T Consensus 296 ~~~c~fc~--~e~p~~~iv~e~~~~~a~~~~~p~~pgh~lviPk~h~~~~~~l~~~~~~~l~~~~~~v~~~l~~~~~~~~ 373 (440)
T 1ems_A 296 TGGLKFAR--FNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTS 373 (440)
T ss_dssp SSCCEETT--EECCGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred cCceeeec--cccCCceEEEECCCEEEEEcCCcCCCCeEEEEEccccCChhHCCHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 56899997 3345667999999999999999999999999999999999999999999999888777776653 23
Q ss_pred CceEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 464 KEAVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 464 ~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
+.+++.. ...+...|+|+|+||+...
T Consensus 374 ~n~~~~~g~~~gq~v~HlH~Hiipr~~~ 401 (440)
T 1ems_A 374 TTICVQDGKDAGQTVPHVHIHILPRRAG 401 (440)
T ss_dssp EEEECCCSGGGTCCSSSCCEEEEEECSS
T ss_pred eEEEEecCCCCCCCccEEEEEEeCCCCC
Confidence 3333222 1233468999999998654
|
| >3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.4e-11 Score=111.73 Aligned_cols=89 Identities=11% Similarity=-0.035 Sum_probs=73.0
Q ss_pred CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEEecCCCCCee
Q 008383 401 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTHA 479 (567)
Q Consensus 401 ~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H~ 479 (567)
.+..+|+..+.|++.|.+.|..|||+||+|++|+.++.+++++++.++......+.+.+++ .+.+-+.+..+++...|+
T Consensus 11 ~d~~~v~~~~~~~v~l~~~p~~pGh~lV~~k~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~~aGq~V~Hl 90 (137)
T 3ohe_A 11 ADTHKLGESRLCDVLLMNDNTWPWVILVPRVSGIREIYELPNEQQQRLLFESSALSEGMMELFGGDKMNVAALGNMVPQL 90 (137)
T ss_dssp HHEEEEEECSSEEEEEESCTTSCEEEEEESCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSSCCSC
T ss_pred cccEEEEECCcEEEEEcCCCCCCEEEEEecccccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeeccCcCCEE
Confidence 3467899999999999999999999999999999999999999988888777766666553 455545454355557999
Q ss_pred EEEEeecCcc
Q 008383 480 NLQAVPIPTS 489 (567)
Q Consensus 480 hi~~vPvp~~ 489 (567)
|+|+||+...
T Consensus 91 H~HviPR~~~ 100 (137)
T 3ohe_A 91 HLHHIVRYQG 100 (137)
T ss_dssp CEEEEEECTT
T ss_pred EEEEeCCCCC
Confidence 9999998654
|
| >3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114} | Back alignment and structure |
|---|
Probab=99.21 E-value=4.1e-11 Score=110.19 Aligned_cols=89 Identities=9% Similarity=0.049 Sum_probs=73.2
Q ss_pred CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEEecCCCCCee
Q 008383 401 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTHA 479 (567)
Q Consensus 401 ~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H~ 479 (567)
+...+|+.++.||+.|.+.|.+|||+||+|++|+.++.+++++++.++......+.+.+++ .+.+-+.+..+++...|+
T Consensus 11 ~d~~~v~~~~~~~v~L~~~p~~pGh~LV~pk~Hv~~l~dL~~e~~~~l~~~~~~va~al~~~~~~~~~Ni~~aGq~V~Hl 90 (149)
T 3i24_A 11 QDCIVLGNLPLCKVLLIKEDIGPWLILVPRIEELKEIHHMTDEQQIQFIKESSAVAQLLEDNFSPDKINIGALGNLVPQL 90 (149)
T ss_dssp HHEEEEEECSSEEEEEECBSSTTEEEEEESCTTCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEECCSSCCSC
T ss_pred cCCEEEEECCCEEEEEcCCCCCCEEEEEeCccccCChhHCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEhhhhCCCCEE
Confidence 3467899999999999999999999999999999999999999988888777666666553 455555555445557899
Q ss_pred EEEEeecCcc
Q 008383 480 NLQAVPIPTS 489 (567)
Q Consensus 480 hi~~vPvp~~ 489 (567)
|+|+||+..+
T Consensus 91 H~HvIPR~~~ 100 (149)
T 3i24_A 91 HIHHIARFTT 100 (149)
T ss_dssp CEEEEEECTT
T ss_pred EEEEeCCccC
Confidence 9999998764
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.09 E-value=8.8e-10 Score=103.55 Aligned_cols=132 Identities=14% Similarity=-0.034 Sum_probs=90.7
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHH
Q 008383 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKV 80 (567)
Q Consensus 1 M~~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~ 80 (567)
|.+|||+++||+||+...+.+.++.+.+ ..|+||++||+... .+..+ . .|+|+|.||||...
T Consensus 4 m~~m~i~~isD~H~~~~~~~~~~~~~~~---~~d~i~~~GD~~~~------~l~~l----~---~~~~~v~GNhD~~~-- 65 (176)
T 3ck2_A 4 MAKQTIIVMSDSHGDSLIVEEVRDRYVG---KVDAVFHNGDSELR------PDSPL----W---EGIRVVKGNMDFYA-- 65 (176)
T ss_dssp CCCEEEEEECCCTTCHHHHHHHHHHHTT---TSSEEEECSCCCSC------TTCGG----G---TTEEECCCTTCCST--
T ss_pred ccCcEEEEEecCCCCHHHHHHHHHHhhc---CCCEEEECCCCchH------HHHhh----h---CCeEEecCcccchh--
Confidence 7889999999999998876665665543 58999999997321 11111 1 28999999998421
Q ss_pred HHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEe
Q 008383 81 LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLT 160 (567)
Q Consensus 81 ~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLT 160 (567)
.+.+. .++++ .+..|+++
T Consensus 66 ------------------~~p~~-------~~~~~-------------------------------------~~~~i~~~ 83 (176)
T 3ck2_A 66 ------------------GYPER-------LVTEL-------------------------------------GSTKIIQT 83 (176)
T ss_dssp ------------------TCCSE-------EEEEE-------------------------------------TTEEEEEE
T ss_pred ------------------cCCcE-------EEEEE-------------------------------------CCeEEEEE
Confidence 00110 01111 23578999
Q ss_pred CCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 161 NEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 161 h~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
|.+|.++. .+...+.+++...++.+.++||.|..+... ...+++||.|.++.
T Consensus 84 Hg~~~~~~----------------~~~~~l~~~~~~~~~d~vi~GHtH~~~~~~-------~~~~~~inpGs~~~ 135 (176)
T 3ck2_A 84 HGHLFDIN----------------FNFQKLDYWAQEEEAAICLYGHLHVPSAWL-------EGKILFLNPGSISQ 135 (176)
T ss_dssp CSGGGTTT----------------TCSHHHHHHHHHTTCSEEECCSSCCEEEEE-------ETTEEEEEECCSSS
T ss_pred CCCccCCC----------------CCHHHHHHHHHhcCCCEEEECCcCCCCcEE-------ECCEEEEECCCCCc
Confidence 99886531 356678888888999999999988654421 23589999998874
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.05 E-value=4e-09 Score=100.73 Aligned_cols=65 Identities=14% Similarity=0.150 Sum_probs=48.8
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChH
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAA 78 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~ 78 (567)
+|||++++|+||+...+-+.++.++.. ..|+||++||++.+ +..+++ .+++.|+|+|.||||...
T Consensus 25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~--~~D~ii~~GDl~~~------~~~~~l---~~l~~~~~~V~GNhD~~~ 89 (190)
T 1s3l_A 25 HMKIGIMSDTHDHLPNIRKAIEIFNDE--NVETVIHCGDFVSL------FVIKEF---ENLNANIIATYGNNDGER 89 (190)
T ss_dssp -CEEEEECCCTTCHHHHHHHHHHHHHS--CCSEEEECSCCCST------HHHHHG---GGCSSEEEEECCTTCCCH
T ss_pred CeEEEEEeeCCCCHHHHHHHHHHHhhc--CCCEEEECCCCCCH------HHHHHH---HhcCCCEEEEeCCCcchH
Confidence 389999999999988776666665532 47999999999863 233444 345689999999999653
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.04 E-value=1.8e-09 Score=106.70 Aligned_cols=188 Identities=11% Similarity=0.056 Sum_probs=102.4
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHH---hhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHH
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVN---KSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKV 80 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~---~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~ 80 (567)
|||+++||+||++..+.+.++.++ ......|+||++||++..... ..++.+++....+ +.++|+|.||||.. .
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~-~~~~~~~l~~l~~-~~~~~~v~GNhD~~--~ 77 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPY-PKEVIEVIKDLTK-KENVKIIRGKYDQI--I 77 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSC-HHHHHHHHHHHHH-HSCEEEECCHHHHH--H
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCC-HHHHHHHHHhhHh-hcCeeEEecchHHH--h
Confidence 799999999999887776666665 432147999999999764322 1233333321111 14799999999732 1
Q ss_pred HHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcC----CCCcc
Q 008383 81 LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEE----PGIVD 156 (567)
Q Consensus 81 ~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~----~~~vD 156 (567)
..... . +.+ +.. ....++.++. ..+. . .+...++++.++.|..+... ..+.+
T Consensus 78 ~~~~~-----------~---~~~--~~~-~~~~~~~~~~---~~~~-~---~~~~~l~~~~~~~L~~lp~~~~~~~~~~~ 133 (252)
T 1nnw_A 78 AMSDP-----------H---ATD--PGY-IDKLELPGHV---KKAL-K---FTWEKLGHEGREYLRDLPIYLVDKIGGNE 133 (252)
T ss_dssp HHSCT-----------T---CSS--SGG-GGGSSCCHHH---HHHH-H---HHHHHHHHHHHHHHHTSCSCEEEEETTEE
T ss_pred hcccc-----------c---cCC--ccc-ccchhhhHHH---HHHH-H---HHHHHCCHHHHHHHHhCCceEEEeeCCcE
Confidence 11110 0 000 000 0000000000 0000 0 00011233444445443110 12458
Q ss_pred EEEeCCCCc-cccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeEEEEccCCC
Q 008383 157 LFLTNEWPS-GVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVG 234 (567)
Q Consensus 157 ILLTh~wP~-gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g 234 (567)
|+++|..|. ...... ....+...+.+++... ++++.|+||.|..+... ...|.+||.|.++
T Consensus 134 i~~~H~~p~~~~~~~~----------~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~-------~~~~~~in~Gs~~ 196 (252)
T 1nnw_A 134 VFGVYGSPINPFDGEV----------LAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM-------TRYGRVVCPGSVG 196 (252)
T ss_dssp EEEESSCSSCTTTCCC----------CSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE-------ETTEEEEEECCSS
T ss_pred EEEEcCCCCCCccccc----------CCCCCHHHHHHHHhcCCCCCEEEECCccccceEe-------cCCeEEEECCCcc
Confidence 999999884 321110 0123457788888888 99999999988754431 2358999999998
Q ss_pred Cc
Q 008383 235 NK 236 (567)
Q Consensus 235 ~~ 236 (567)
.+
T Consensus 197 ~~ 198 (252)
T 1nnw_A 197 FP 198 (252)
T ss_dssp SC
T ss_pred CC
Confidence 53
|
| >1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=5.6e-10 Score=116.69 Aligned_cols=99 Identities=16% Similarity=0.221 Sum_probs=76.4
Q ss_pred CCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH-h---cCC
Q 008383 389 KECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK-N---QGK 464 (567)
Q Consensus 389 ~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~-~---~g~ 464 (567)
.+|.||.... ..+||++++++++++|..|..|||+||||++|+.++.+++++++.+|....+.+.+.+. . .++
T Consensus 214 ~~ciFc~ii~---~E~iV~E~e~~~af~~~~p~~P~h~lViPk~Hv~~l~dl~~~e~~~La~~l~~v~~~l~~~~~~~~y 290 (351)
T 1z84_A 214 GKCCLCEAKS---KHFVIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPY 290 (351)
T ss_dssp SSCTTTTHHH---HSEEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTSCCE
T ss_pred CCCHHHHHHh---cCeEEecCCcEEEEeccCCCCCeEEEEEeccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 5799997532 12299999999999999999999999999999999999999999999988876654443 2 345
Q ss_pred ceEEEE-ecC-----CCCCeeEEEEeecCcch
Q 008383 465 EAVFFE-WLS-----KRGTHANLQAVPIPTSK 490 (567)
Q Consensus 465 ~~v~~E-~~~-----~~~~H~hi~~vPvp~~~ 490 (567)
.+++.. -.+ +...|+|+|++|+-+..
T Consensus 291 n~~~n~gp~~g~~~~q~v~HlHiHiiPR~~~~ 322 (351)
T 1z84_A 291 NYMIHTSPLKVTESQLPYTHWFLQIVPQLSGV 322 (351)
T ss_dssp EEEEECCCTTCCGGGGGGCCCEEEEEECCCCC
T ss_pred EEEEeCCCccCCCCCCccceEEEEEEccCCCc
Confidence 555443 112 13479999999976543
|
| >3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.8e-09 Score=96.30 Aligned_cols=87 Identities=10% Similarity=0.058 Sum_probs=68.2
Q ss_pred cceEEEECCEEEEEecCCCCCCCeEEEEec-cccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEEecCCCCCee
Q 008383 402 SHLIVSVGEYYYCALPKGPLVEDHVLVIPV-EHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTHA 479 (567)
Q Consensus 402 ~hliis~g~~~yl~l~kgpl~~gH~LIiP~-~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H~ 479 (567)
...+|+.++.|++.|.+.|..|| .||||. +|+.++.+++++++.++......+.+.+++ .+.+-+.+...++...|+
T Consensus 14 ~~~~v~~~~~~~v~l~~~~~~p~-~lvVpkr~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~~aGq~V~Hl 92 (135)
T 3nrd_A 14 DGIPIGTLGLCQMRLMNDRRWPW-LILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIGALGNIVRQL 92 (135)
T ss_dssp HEEEEEECSSEEEEEESCTTSCE-EEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECCSSCCSC
T ss_pred CCEEEEECCcEEEEEcCCCCCCE-EEEEcCccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccCCCCEE
Confidence 45689999999999999999995 577787 899999999999888888777666665543 454445555345557899
Q ss_pred EEEEeecCcc
Q 008383 480 NLQAVPIPTS 489 (567)
Q Consensus 480 hi~~vPvp~~ 489 (567)
|+|+||+..+
T Consensus 93 H~HviPR~~~ 102 (135)
T 3nrd_A 93 HVHVIARREG 102 (135)
T ss_dssp CEEEEEECTT
T ss_pred EEEEecCCCC
Confidence 9999998654
|
| >1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=4.8e-10 Score=117.10 Aligned_cols=97 Identities=13% Similarity=0.078 Sum_probs=74.2
Q ss_pred CCCccccCCC-CCC-cceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-c---
Q 008383 389 KECWFCLSSP-SVE-SHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-Q--- 462 (567)
Q Consensus 389 ~~C~FC~~~~-~~~-~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~--- 462 (567)
++|.||.... ..+ ...||++++++++++|..|..+||+||||++|+.++.+++++++.+|....+.+.+.+.+ .
T Consensus 194 ~~Cifc~ii~~E~~~~~~iV~E~e~~~af~~~~p~~pgh~lViPK~Hv~~l~dL~~~e~~~La~~l~~v~~~l~~~~~~~ 273 (348)
T 1gup_A 194 KSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCS 273 (348)
T ss_dssp SSCHHHHHHHHHHHHCTTEEEECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCCchhHHHhhccccCceEEEeCCcEEEEEccCCCCceEEEEEeCcccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6899997532 121 347899999999999999999999999999999999999999999998776655555443 2
Q ss_pred -CCceEEEEe-cC---CCCCeeEEEEee
Q 008383 463 -GKEAVFFEW-LS---KRGTHANLQAVP 485 (567)
Q Consensus 463 -g~~~v~~E~-~~---~~~~H~hi~~vP 485 (567)
++.+++.-. .+ +...|+|+|+||
T Consensus 274 ~~Yn~g~~~~p~~g~~q~v~HlHiHiiP 301 (348)
T 1gup_A 274 FPYSMGWHGAPFNGEENQHWQLHAHFYP 301 (348)
T ss_dssp CCEEEEEECCCSSSSCCTTCCCEEEEEC
T ss_pred CCeEEEEEeCCCCCCCCcccEEEEEEec
Confidence 444444431 12 235799999999
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.91 E-value=5.2e-09 Score=101.72 Aligned_cols=144 Identities=13% Similarity=0.095 Sum_probs=87.7
Q ss_pred CEEEEEcCCCCCHHH--HHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHH
Q 008383 4 PRILLCGDVLGRLNQ--LFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVL 81 (567)
Q Consensus 4 ~KILv~GDvhG~~~~--l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~ 81 (567)
|||++++|+|++... +.+.+.++.++ ...|+||++||++. .+..+++ .+++.|+|+|.||||...
T Consensus 26 m~i~~iSD~H~~~~~~~l~~~l~~~~~~-~~~D~vi~~GDl~~------~~~l~~l---~~~~~~v~~V~GNHD~~~--- 92 (215)
T 2a22_A 26 DLVLLIGDLKIPYGAKELPSNFRELLAT-DKINYVLCTGNVCS------QEYVEML---KNITKNVYIVSGDLDSAI--- 92 (215)
T ss_dssp EEEEEECCCCTTTTCSSCCGGGHHHHHC-TTCCEEEECSCCCC------HHHHHHH---HHHCSCEEECCCTTCCSC---
T ss_pred cEEEEEecCCCCCChHHHHHHHHHHHhc-CCCCEEEECCCCCC------HHHHHHH---HHcCCCEEEecCCCcCcc---
Confidence 799999999997532 33333333222 35899999999985 1233333 233468999999998431
Q ss_pred HHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeC
Q 008383 82 LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTN 161 (567)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh 161 (567)
. ...+. ++.. .+ . . ......+..|+++|
T Consensus 93 ---------------~-~~~~~--~~~~-----------------lp--~----~-----------~~~~~~~~~i~l~H 120 (215)
T 2a22_A 93 ---------------F-NPDPE--SNGV-----------------FP--E----Y-----------VVVQIGEFKIGLMH 120 (215)
T ss_dssp ---------------C-BCCGG--GTBC-----------------CC--S----E-----------EEEEETTEEEEEEC
T ss_pred ---------------c-ccChh--hHhh-----------------CC--c----e-----------EEEecCCeEEEEEc
Confidence 0 00000 0000 00 0 0 00001346799999
Q ss_pred CCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 162 EWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 162 ~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
..|... ..+...+.++++...+.|.++||.|..+.. ....+++||.|.++.
T Consensus 121 g~~~~~----------------~~~~~~l~~~~~~~~~d~vl~GHtH~~~~~-------~~~~~~~inpGS~~~ 171 (215)
T 2a22_A 121 GNQVLP----------------WDDPGSLEQWQRRLDCDILVTGHTHKLRVF-------EKNGKLFLNPGTATG 171 (215)
T ss_dssp STTSSS----------------TTCHHHHHHHHHHHTCSEEEECSSCCCEEE-------EETTEEEEECCCSSC
T ss_pred CCccCC----------------CCCHHHHHHHHhhcCCCEEEECCcCCCccE-------eeCCEEEEECCcccc
Confidence 777532 124567788888889999999998865432 123589999999864
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.3e-08 Score=102.49 Aligned_cols=184 Identities=11% Similarity=0.109 Sum_probs=108.1
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHH
Q 008383 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKV 80 (567)
Q Consensus 1 M~~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~ 80 (567)
|...||+++||+||++..|-+.++.+... +.|.|||+||++..... ..++.+++. +. .|+++|.||||. .+
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~--~~D~ii~~GDlv~~g~~-~~~~~~~l~---~~-~~~~~v~GNhD~--~~ 79 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQL--GVDEYWLLGDILMPGTG-RRRILDLLD---QL-PITARVLGNWED--SL 79 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHT--TCCEEEECSCCSSSSSC-SHHHHHHHH---TS-CEEEECCCHHHH--HH
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhc--CCCEEEEcCCCCCCCCC-HHHHHHHHH---cc-CCEEEEcCChHH--HH
Confidence 44679999999999998887777776654 47999999999865433 234555553 22 278999999973 23
Q ss_pred HHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhc----CCCCcc
Q 008383 81 LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAE----EPGIVD 156 (567)
Q Consensus 81 ~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~----~~~~vD 156 (567)
+..... .... .. .... .+ +-.. .-+...++++.++.|..+.. .-.+..
T Consensus 80 ~~~~~~----------~~~~-~~-----~~~~-~~--------~~~~---~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~ 131 (270)
T 3qfm_A 80 WHGVRK----------ELDS-TR-----PSQR-YL--------LRQC---QYVLEEISLEEIEVLHNQPLQIHRQFGDLT 131 (270)
T ss_dssp HHHHTT----------CSCT-TS-----HHHH-HH--------HHHH---HHHHTTSCHHHHHHHHSCCSEEEEEETTEE
T ss_pred HHhhcc----------ccCC-Cc-----HHHH-HH--------HHHH---HHHHHHcCHHHHHHHHhCCCceEEEECCcE
Confidence 332210 0000 00 0000 00 0000 00012445677777776521 114568
Q ss_pred EEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCCc
Q 008383 157 LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNK 236 (567)
Q Consensus 157 ILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~ 236 (567)
|+++|..|.......- . .......+.+++......+.|+||.|.-+.+. ....+.+||.|++|.+
T Consensus 132 i~lvHg~p~~~~~~~~---~------~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~------~~~~~~~iNpGSvg~p 196 (270)
T 3qfm_A 132 VGISHHLPDKNWGREL---I------HTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY------GTGGQLIVNPGSIGQP 196 (270)
T ss_dssp EEEESSBTTBSSSSTT---S------TTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE------CTTSCEEEEECCSSSC
T ss_pred EEEEECCCCCCCCcee---c------CCCcHHHHHHHhcccCCCEEEECCcCchHhee------ccCCEEEEECCCccCC
Confidence 9999988875421100 0 11234457777777789999999998644321 1235789999999975
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=98.89 E-value=5.1e-09 Score=99.77 Aligned_cols=135 Identities=13% Similarity=0.132 Sum_probs=86.3
Q ss_pred CEEEEEcCCCCCHH--HHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHH
Q 008383 4 PRILLCGDVLGRLN--QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVL 81 (567)
Q Consensus 4 ~KILv~GDvhG~~~--~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~ 81 (567)
|||++++|+|++.. .+.+++.++.++ ...|+||++||++. . +..+++ .+.+.|+|+|.||||...
T Consensus 11 m~i~~iSD~H~~~~~~~~~~~l~~~~~~-~~~d~ii~~GDl~~--~----~~~~~l---~~~~~~~~~v~GNhD~~~--- 77 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRCNSLPAKFKKLLVP-GKIQHILCTGNLCT--K----ESYDYL---KTLAGDVHIVRGDFDENL--- 77 (192)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCT-TSCSEEEECSCCBS--H----HHHHHH---HHHCSEEEECCCTTCCCT---
T ss_pred eEEEEEecCCCCccchhHHHHHHHHhcc-CCCCEEEEcCCCCC--H----HHHHHH---HhcCCCEEEEcCCcCccc---
Confidence 89999999998642 233344443322 25899999999985 1 223333 223468999999998421
Q ss_pred HHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeC
Q 008383 82 LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTN 161 (567)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh 161 (567)
.+... .++++ .+..|+++|
T Consensus 78 -----------------~lp~~-------~~~~~-------------------------------------~~~~i~l~H 96 (192)
T 1z2w_A 78 -----------------NYPEQ-------KVVTV-------------------------------------GQFKIGLIH 96 (192)
T ss_dssp -----------------TSCSE-------EEEEE-------------------------------------TTEEEEEEC
T ss_pred -----------------cCCcc-------eEEEE-------------------------------------CCEEEEEEC
Confidence 00000 01111 235688888
Q ss_pred CCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 162 EWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 162 ~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
..|.... .+...+.++++...+.|.++||.|..+.. ....+++||.|+++.
T Consensus 97 g~~~~~~----------------~~~~~l~~~~~~~~~d~vi~GHtH~~~~~-------~~~~~~~inpGS~~~ 147 (192)
T 1z2w_A 97 GHQVIPW----------------GDMASLALLQRQFDVDILISGHTHKFEAF-------EHENKFYINPGSATG 147 (192)
T ss_dssp SCCCCBT----------------TCHHHHHHHHHHHSSSEEECCSSCCCEEE-------EETTEEEEECCCTTC
T ss_pred CCcCCCC----------------CCHHHHHHHHHhcCCCEEEECCcCcCccE-------eECCEEEEECCcccc
Confidence 7775421 23556778888889999999998865432 123589999999864
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=98.89 E-value=9.2e-10 Score=109.04 Aligned_cols=175 Identities=13% Similarity=0.034 Sum_probs=103.3
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHH
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLL 82 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~ 82 (567)
.|||+++||+||++..+.+.++.+. +.|.+|++||++..... ..++.+++.. .+ .+|+|.||||.. +..
T Consensus 3 ~mri~~isDiHg~~~~l~~~l~~~~----~~d~ii~~GDl~~~g~~-~~~~~~~l~~---~~-~~~~v~GNhD~~--~~~ 71 (246)
T 3rqz_A 3 AMRILIISDVHANLVALEAVLSDAG----RVDDIWSLGDIVGYGPR-PRECVELVRV---LA-PNISVIGNHDWA--CIG 71 (246)
T ss_dssp CCCEEEECCCTTCHHHHHHHHHHHC----SCSEEEECSCCSSSSSC-HHHHHHHHHH---HC-SSEECCCHHHHH--HTC
T ss_pred CcEEEEEeecCCCHHHHHHHHHhcc----CCCEEEECCCcCCCCCC-HHHHHHHHHh---cC-CCEEEeCchHHH--Hhc
Confidence 5899999999999988766665554 57999999999875433 2233444322 11 269999999732 111
Q ss_pred HHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCC-CCCCCCCCHHHHHHHHHhhcCCCCccEEEeC
Q 008383 83 AASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSE-GQQFGTYSQDDVDALRALAEEPGIVDLFLTN 161 (567)
Q Consensus 83 ~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~-~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh 161 (567)
.. .. .. .. +..... ..+...++++.++.|..+......-+|+++|
T Consensus 72 ~~-----------~~----~~-----------~~--------~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~i~~~H 117 (246)
T 3rqz_A 72 RL-----------SL----DE-----------FN--------PVARFASYWTTMQLQAEHLQYLESLPNRMIDGDWTVVH 117 (246)
T ss_dssp CC-----------CC----C-------------C--------GGGGCHHHHHHHHCCHHHHHHHHHCCSEEEETTEEEES
T ss_pred cC-----------Cc----cc-----------cC--------HHHHHHHHHHHHHcCHHHHHHHHhCCcEEEECCEEEEE
Confidence 00 00 00 00 000000 0001234566666777653211123899999
Q ss_pred CCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccc-----------------cccCCCCcce
Q 008383 162 EWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYARE-----------------PYSNVDAVHV 224 (567)
Q Consensus 162 ~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~-----------------Py~~~~~~~~ 224 (567)
..|...... .......+.++++...+++.|+||.|.-|.+. +|.- ...
T Consensus 118 g~p~~~~~~------------~~~~~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l---~~g 182 (246)
T 3rqz_A 118 GSPRHPIWE------------YIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDV---SSG 182 (246)
T ss_dssp SCSSSTTTC------------CCCSHHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEEC---SSS
T ss_pred CCcCCcccc------------ccCChHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeec---CCC
Confidence 988764210 11234677888889999999999998654332 0100 113
Q ss_pred eEEEEccCCCCcc
Q 008383 225 TRFLGLAPVGNKE 237 (567)
Q Consensus 225 TRFI~L~~~g~~~ 237 (567)
+++||.|++|.+.
T Consensus 183 ~~ivNpGSVG~Pr 195 (246)
T 3rqz_A 183 RYIINPGAVGQPR 195 (246)
T ss_dssp CEEEEECCSSCCC
T ss_pred eEEEECCccCCCC
Confidence 8999999998753
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=98.86 E-value=2.4e-08 Score=100.89 Aligned_cols=209 Identities=11% Similarity=-0.004 Sum_probs=113.4
Q ss_pred CCEEEEEcCCCCCH-------------------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChh----hHHHHHHHhcc
Q 008383 3 PPRILLCGDVLGRL-------------------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----LLDEFMNYVEG 59 (567)
Q Consensus 3 ~~KILv~GDvhG~~-------------------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~----~~~~~~~~l~g 59 (567)
.|||++++|+|... ..+-+.++.+++ .+.|+||++||++..... ..+++..++.-
T Consensus 5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRR--ERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHH--TTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHh--cCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 58999999999865 334444555554 357999999999875321 02233333322
Q ss_pred cCCCCccEEEEccCCCCh----HHHHHHHhccccccCcccCCceecccEEEeCC-CCeEEE-cCeEEEEEecccCC----
Q 008383 60 RSEIPIPTYFIGDYGVGA----AKVLLAASKNSANQGFKMDGFKVTDNLFWLKG-SGNFTL-HGLSVAYLSGRQSS---- 129 (567)
Q Consensus 60 ~~~~p~ptyfv~GN~~~~----~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~-~gv~~~-~GlrIa~lgG~~~~---- 129 (567)
..++++|+|+++||||.. ..+...+..... ......+..+.. .+. .-.+.. +|++|..|.+....
T Consensus 83 l~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~y~~~~~~~~~~i~ld~~~~~~~~~ 157 (322)
T 2nxf_A 83 LDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQ-RTGTDTGSDLIG----DDIYAYEFSPAPNFRFVLLDAYDLSVIGR 157 (322)
T ss_dssp HHTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC-------CEECGG----GTCCCEEEEEETTEEEEECCTTSBCSSSS
T ss_pred HHhcCCcEEEecCCCCcccCCHHHHhhhhCCccc-ccccccccccCC----CCceEEEEecCCCEEEEEEcCceeccccc
Confidence 245688999999999852 111111110000 000000000110 111 112244 68888888765310
Q ss_pred ------------------CC----C--------------CCCCCCHHHHHHHHHh-hcCC--CCccEEEeCCCCcccccc
Q 008383 130 ------------------EG----Q--------------QFGTYSQDDVDALRAL-AEEP--GIVDLFLTNEWPSGVTNK 170 (567)
Q Consensus 130 ------------------~~----~--------------~~~~~t~~dv~~L~~~-~~~~--~~vDILLTh~wP~gI~~~ 170 (567)
+. . ....+.++.++.|.+. .... ...-|+++|.+|......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~~~~~iv~~H~p~~~~~~~ 237 (322)
T 2nxf_A 158 EEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAAD 237 (322)
T ss_dssp CTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHTCEEEEEESSCCCTTSSC
T ss_pred CCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhcCCcEEEEEccCCCCCCCC
Confidence 00 0 0123457777766642 1111 234599999999765321
Q ss_pred ccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeEEEEccCC
Q 008383 171 AAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPV 233 (567)
Q Consensus 171 ~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~ 233 (567)
. . ....+...+.+++... +.+++|+||.|....... ...+++|+.+..
T Consensus 238 ~------~---~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~------~~g~~~i~~~~~ 286 (322)
T 2nxf_A 238 P------I---CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD------SSGAQHITLEGV 286 (322)
T ss_dssp G------G---GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC------TTSCEEEECCCG
T ss_pred c------c---ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec------cCCceEEEecch
Confidence 0 0 1123677888888887 678899999886543221 224778877665
|
| >3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.9e-08 Score=92.30 Aligned_cols=88 Identities=10% Similarity=0.017 Sum_probs=68.8
Q ss_pred CcceEEEECCEEEEEecCCCCCCCeEEEEecc-ccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEEecCCCCCe
Q 008383 401 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVE-HVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTH 478 (567)
Q Consensus 401 ~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~-H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H 478 (567)
....++.....+++.+...+ +.+|+||||++ |+.++.+++++++.+|....+.+.+.++. .+.+-+.+..+++...|
T Consensus 16 ~d~~~~~e~p~~~v~l~~~~-~~~H~LVIPk~~H~~~l~dL~~e~~~~l~~~~~~va~~l~~~~~~~g~N~~~aGq~V~H 94 (149)
T 3i4s_A 16 EDTIDIGDLPLSKVLVIKDA-NYPWLLLVPRRPDAVEIIDLDEVQQAQLMTEISRVSRALKEITKCDKLNIAALGNLVPQ 94 (149)
T ss_dssp HHEEEEEECSSEEEEEESCT-TSCEEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECCSSCCS
T ss_pred hCCEEEEEcCceEEEECCCC-CCCEEEEEecccccCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeecCCcCCE
Confidence 34668899999999998544 57799999999 99999999999999988887777766553 34444444535555799
Q ss_pred eEEEEeecCcc
Q 008383 479 ANLQAVPIPTS 489 (567)
Q Consensus 479 ~hi~~vPvp~~ 489 (567)
+|+|+||+..+
T Consensus 95 lH~HvIPR~~~ 105 (149)
T 3i4s_A 95 LHVHIIARRTG 105 (149)
T ss_dssp CCEEEEEECTT
T ss_pred EEEEEECCcCC
Confidence 99999998764
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.77 E-value=2.4e-07 Score=99.12 Aligned_cols=191 Identities=9% Similarity=0.042 Sum_probs=106.5
Q ss_pred CCEEEEEcCCCCCH-------------------------HHHHHH-HHHHHhhcCCCcEEEEecCCCCCChh-hHHHHHH
Q 008383 3 PPRILLCGDVLGRL-------------------------NQLFKR-VQSVNKSAGPFDAVLCVGQFFPDSSE-LLDEFMN 55 (567)
Q Consensus 3 ~~KILv~GDvhG~~-------------------------~~l~~k-v~~l~~k~GpfD~vi~~GDff~~~~~-~~~~~~~ 55 (567)
.+||++++|+|... ...+++ ++.+++ . +.|+||++||++..... ....+.+
T Consensus 39 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-~~d~vi~~GDl~~~~~~~~~~~~~~ 116 (443)
T 2xmo_A 39 NLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVES-K-KTDVLIISGDLTNNGEKTSHEELAK 116 (443)
T ss_dssp CEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHH-H-TCSEEEEESCCBSSCCHHHHHHHHH
T ss_pred CeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHH-c-CCCEEEECCCCCCCCCHHHHHHHHH
Confidence 47999999999741 222333 333332 3 36999999999754321 1223334
Q ss_pred HhcccCCCCccEEEEccCCCChHHH-------------------HHHHhccccccCcccCCceecccEEEeCCCCeE---
Q 008383 56 YVEGRSEIPIPTYFIGDYGVGAAKV-------------------LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF--- 113 (567)
Q Consensus 56 ~l~g~~~~p~ptyfv~GN~~~~~~~-------------------~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~--- 113 (567)
++......++|+|+++||||..... +...-. ..+ ....+.--....-+
T Consensus 117 ~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~~~~y~~~ 186 (443)
T 2xmo_A 117 KLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYS--------DFG--YEDAISSDEFSLSYLAA 186 (443)
T ss_dssp HHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTC--------CCC--CTTCSEECSSSSCEEEC
T ss_pred HHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhh--------hcC--hhhhhccCCCCceEEEe
Confidence 4432233478999999999863210 000000 000 00000000001112
Q ss_pred EEcCeEEEEEecccCC------CCCCCCCCCHHHHHHHHHhh---cCCCCccEEEeCCCCccccccccccccccccCCCC
Q 008383 114 TLHGLSVAYLSGRQSS------EGQQFGTYSQDDVDALRALA---EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSS 184 (567)
Q Consensus 114 ~~~GlrIa~lgG~~~~------~~~~~~~~t~~dv~~L~~~~---~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~ 184 (567)
..+|++|.+|...... +......+++++++.|.... ......-|+++|.+|....+.... . ...
T Consensus 187 ~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~~~~Iv~~H~p~~~~~~~~~~-----~--~~~ 259 (443)
T 2xmo_A 187 PSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQK-----G--YTI 259 (443)
T ss_dssp SBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTTCEEEEECSSBSSCSSCC--C-----C--SBC
T ss_pred cCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcCCeEEEEECCCCccccccccc-----c--ccc
Confidence 2468999998766422 11223456788877776532 112334599999999876321110 0 113
Q ss_pred CCcHHHHHHHHHhCCCEEEEccCCCccc
Q 008383 185 NTDSTVSELVAEIKPRYHIAGSKGVFYA 212 (567)
Q Consensus 185 ~Gs~~i~~l~~~lkPRYhf~Gh~~~fyE 212 (567)
.+...+.++++..+++++|+||.|....
T Consensus 260 ~~~~~l~~ll~~~~v~lvl~GH~H~~~~ 287 (443)
T 2xmo_A 260 NYNQQVIDALTEGAMDFSLSGHIHTQNI 287 (443)
T ss_dssp TTHHHHHHHHHHTTCCEEEECSSCSCEE
T ss_pred ccHHHHHHHHHHcCCeEEEECCcccCch
Confidence 4678899999999999999999886543
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=3.8e-08 Score=99.19 Aligned_cols=205 Identities=11% Similarity=0.018 Sum_probs=110.8
Q ss_pred CCEEEEEcCCCCCH---------HHHHHHHHHHHhhcCCCcEEEEecCCCCCC---hhhHHHHHHHhccc---CCC-Ccc
Q 008383 3 PPRILLCGDVLGRL---------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDS---SELLDEFMNYVEGR---SEI-PIP 66 (567)
Q Consensus 3 ~~KILv~GDvhG~~---------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~---~~~~~~~~~~l~g~---~~~-p~p 66 (567)
.+||+++||+|... ..+.+.+..+.++. +.|+||++||++... .....++.+.+... ..+ ++|
T Consensus 6 ~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~-~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p 84 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTL-GADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVP 84 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHH-CCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCC
T ss_pred ceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhc-CCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCC
Confidence 58999999999863 34555555543333 479999999985321 11111333333211 124 789
Q ss_pred EEEEccCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEE------cCeEEEEEecccCCC----------
Q 008383 67 TYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL------HGLSVAYLSGRQSSE---------- 130 (567)
Q Consensus 67 tyfv~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~------~GlrIa~lgG~~~~~---------- 130 (567)
+|+++||||........+.-.. ....+..++.+|. +.+ ++++|.+|.......
T Consensus 85 ~~~v~GNHD~~~~~~~~~~~~~------~~~~~~~~~~~y~-----~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~ 153 (313)
T 1ute_A 85 WHVLAGNHDHLGNVSAQIAYSK------ISKRWNFPSPYYR-----LRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQP 153 (313)
T ss_dssp EEECCCHHHHHSCHHHHHHGGG------TSTTEECCSSSEE-----EEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSC
T ss_pred EEEECCCCccCCCccccccccc------cCCCccCcccceE-----EEEecCCCCceEEEEEEEChHHhCcCcccccccc
Confidence 9999999985322222111000 0011111221111 122 367777776543100
Q ss_pred -CCCCCCCCHHHHHHHHH-hhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC
Q 008383 131 -GQQFGTYSQDDVDALRA-LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG 208 (567)
Q Consensus 131 -~~~~~~~t~~dv~~L~~-~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~ 208 (567)
......+.+++++.|.+ +.......-|+++|.+|......... ..-...+.+++++.+..+.|+||.|
T Consensus 154 ~~~~~~~~~~~q~~wL~~~L~~~~~~~~iv~~H~p~~~~~~~~~~----------~~~~~~l~~~l~~~~v~~~l~GH~H 223 (313)
T 1ute_A 154 ERPRNLALARTQLAWIKKQLAAAKEDYVLVAGHYPVWSIAEHGPT----------HCLVKQLLPLLTTHKVTAYLCGHDH 223 (313)
T ss_dssp CSCSCHHHHHHHHHHHHHHHHHCCCSEEEEECSSCSSCCSSSCCC----------HHHHHHTHHHHHHTTCSEEEECSSS
T ss_pred CCccccchHHHHHHHHHHHHHhCCCCeEEEEECCCCccCCCCCCc----------HHHHHHHHHHHHHcCCcEEEECChh
Confidence 00011223555666665 33333467899999999865321110 0012456777888899999999988
Q ss_pred CccccccccCCCCcceeEEEEccCCCC
Q 008383 209 VFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 209 ~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
.+.-.. ....+.+|+.|..+.
T Consensus 224 ~~~~~~------~~~g~~~i~~gs~~~ 244 (313)
T 1ute_A 224 NLQYLQ------DENGLGFVLSGAGNF 244 (313)
T ss_dssp SEEEEE------CTTCCEEEEECBSSC
T ss_pred hhhhcc------CCCCceEEEECCCcC
Confidence 542211 122578888887764
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=98.71 E-value=2.5e-08 Score=103.23 Aligned_cols=219 Identities=11% Similarity=0.107 Sum_probs=104.5
Q ss_pred CCCCEEEEEcCCC-C----CH----------HHHHHHHHHHHhhcCCCcEEEEecC-CCCCCh---hhHHHHHHHhcccC
Q 008383 1 MSPPRILLCGDVL-G----RL----------NQLFKRVQSVNKSAGPFDAVLCVGQ-FFPDSS---ELLDEFMNYVEGRS 61 (567)
Q Consensus 1 M~~~KILv~GDvh-G----~~----------~~l~~kv~~l~~k~GpfD~vi~~GD-ff~~~~---~~~~~~~~~l~g~~ 61 (567)
|..||||.++|+| | +. ...++++-....+. ..|+||++|| +|.... .....+.+++....
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~-~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKR-EVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHH-TCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHh-CCCEEEECCccccCCCCCCHHHHHHHHHHHHHHH
Confidence 3469999999999 7 31 23444443332233 4799999999 876422 22223444443322
Q ss_pred CCCccEEEEccCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeE---EE--cCeEEEEEecccCCCCCC--C
Q 008383 62 EIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF---TL--HGLSVAYLSGRQSSEGQQ--F 134 (567)
Q Consensus 62 ~~p~ptyfv~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~---~~--~GlrIa~lgG~~~~~~~~--~ 134 (567)
.. +|+|+|+||||... +..... . -....+|+++++..... .+ +++.|.++.......... .
T Consensus 95 ~~-~pv~~i~GNHD~~~--~~~~~~--~-------l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~ 162 (336)
T 2q8u_A 95 RT-APVVVLPGNHDWKG--LKLFGN--F-------VTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNE 162 (336)
T ss_dssp HH-SCEEECCC--------CHHHHH--H-------HHHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC-------CCS
T ss_pred hc-CCEEEECCCCCccc--cccHHH--H-------HHhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHhh
Confidence 22 79999999998653 221110 0 00012568888765432 12 356677664332110000 0
Q ss_pred CCCCHHHHHHHH-Hhhc---CCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCc
Q 008383 135 GTYSQDDVDALR-ALAE---EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVF 210 (567)
Q Consensus 135 ~~~t~~dv~~L~-~~~~---~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f 210 (567)
..| ++.++.+. .+.. ......||++|.++.+.... +.. .......+...+......|.++||.|..
T Consensus 163 ~~~-~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~-~~~--------~~~~~~~v~~~l~~~~~d~v~~GH~H~~ 232 (336)
T 2q8u_A 163 GDF-RFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY-AGI--------EQGREIIINRALIPSVVDYAALGHIHSF 232 (336)
T ss_dssp SHH-HHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC-----------------CCCEECGGGSCTTSSEEEEESCSSC
T ss_pred HHH-HHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCC-CCc--------cchhhcccCHHHccccCCEEEEccccCc
Confidence 011 22233322 2221 24567899999999876321 000 0000001111122246789999998876
Q ss_pred cccccccCCCCcceeEEEEccCCCC----c-ccceeEEEeccCCC
Q 008383 211 YAREPYSNVDAVHVTRFLGLAPVGN----K-EKQKFIHALSPTPA 250 (567)
Q Consensus 211 yEr~Py~~~~~~~~TRFI~L~~~g~----~-~K~Kw~yAf~i~p~ 250 (567)
.... ..+++++.|.... . ...|.+.-+++.+.
T Consensus 233 ~~~~--------~~~~i~y~GS~~~~s~~e~~~~~~~~lv~i~~~ 269 (336)
T 2q8u_A 233 REIQ--------KQPLTIYPGSLIRIDFGEEADEKGAVFVELKRG 269 (336)
T ss_dssp EEEE--------ETTEEEECCCSSCCSGGGTTCCCEEEEEEEETT
T ss_pred eEeC--------CCccEEECCCCcCCCccccCCCCEEEEEEEeCC
Confidence 4321 1146677665421 1 11355555666543
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=4.3e-08 Score=103.57 Aligned_cols=203 Identities=13% Similarity=0.031 Sum_probs=106.0
Q ss_pred CCCEEEEEcCCCCCHH------------HHHHHHHHHHhhcCCCcEEEEecCCCCCCh---hhHHHHHHHhcccCCCCcc
Q 008383 2 SPPRILLCGDVLGRLN------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSS---ELLDEFMNYVEGRSEIPIP 66 (567)
Q Consensus 2 ~~~KILv~GDvhG~~~------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~---~~~~~~~~~l~g~~~~p~p 66 (567)
..||||+++|+|.... ..++++-....+. ..|+||++||+|.... .....+.+++......++|
T Consensus 19 ~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~-~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~p 97 (386)
T 3av0_A 19 SHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEI-KPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIK 97 (386)
T ss_dssp CCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTT-CCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHc-CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence 4699999999997621 2233322222223 4799999999986532 1222344444333334789
Q ss_pred EEEEccCCCChHHHHHHHhccccccCcccCCc-eecccEEEeCCCCeEEE--cCeEEEEEecccCCCCCCCCCCCHHHH-
Q 008383 67 TYFIGDYGVGAAKVLLAASKNSANQGFKMDGF-KVTDNLFWLKGSGNFTL--HGLSVAYLSGRQSSEGQQFGTYSQDDV- 142 (567)
Q Consensus 67 tyfv~GN~~~~~~~~~~l~~~~~~~~~~~~~~-~i~~Nl~~Lg~~gv~~~--~GlrIa~lgG~~~~~~~~~~~~t~~dv- 142 (567)
+|+|.||||.....-. . ... .+..++.+|+...++.. .++.|.+++.... ....++
T Consensus 98 v~~v~GNHD~~~~~~~-~-----------~~~~~l~~~v~~l~~~~v~~~~~~~v~i~gl~~~~~--------~~~~~~~ 157 (386)
T 3av0_A 98 VYIVAGNHEMPRRLGE-E-----------SPLALLKDYVKILDGKDVINVNGEEIFICGTYYHKK--------SKREEML 157 (386)
T ss_dssp EEECCCGGGSCSSTTS-C-----------CGGGGGTTTCEECSEEEEEEETTEEEEEEEECCCCS--------TTHHHHH
T ss_pred EEEEcCCCCCCccccc-c-----------CHHHHHHHHeEEcCCCcEEEeCCCCEEEEeCCCCCH--------HHHHHHH
Confidence 9999999985421000 0 000 01222455554333222 4566766654321 112222
Q ss_pred HHHHHhhc--CCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCC
Q 008383 143 DALRALAE--EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVD 220 (567)
Q Consensus 143 ~~L~~~~~--~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~ 220 (567)
+.|..+.. ......||++|.++.++... . .... +..+ -+..|+++||.|.. ...++
T Consensus 158 ~~l~~l~~~~~~~~~~Ill~H~~~~~~~~~-~----------~~~~---~~~l---~~~d~v~~GH~H~~-~~~~~---- 215 (386)
T 3av0_A 158 DKLKNFESEAKNYKKKILMLHQGINPYIPL-D----------YELE---HFDL---PKFSYYALGHIHKR-ILERF---- 215 (386)
T ss_dssp HHHHHHHHHHHTCSSEEEEECCCCTTTSSS-S----------CSSC---GGGS---CCCSEEEECSCCSC-EEEEC----
T ss_pred HHHHHhhhhcccCCCEEEEECcCccccCCC-C----------cccC---HHHh---hhCCeEEccCCCCC-ccccC----
Confidence 22332211 13568899999998765220 0 0000 1111 13789999998876 23221
Q ss_pred CcceeEEEEccCCCC-c--c------cceeEEEeccCC
Q 008383 221 AVHVTRFLGLAPVGN-K--E------KQKFIHALSPTP 249 (567)
Q Consensus 221 ~~~~TRFI~L~~~g~-~--~------K~Kw~yAf~i~p 249 (567)
..+.+++.|.... . + ..|-++-+.+..
T Consensus 216 --~~~~i~ypGS~~~~~~~e~~~~~~~~kg~~lv~i~~ 251 (386)
T 3av0_A 216 --NDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFSG 251 (386)
T ss_dssp --SSSEEEECCCSSCCSGGGTHHHHHHCSEEEEEECCS
T ss_pred --CCceEEECCcccccCcchhccccCCCCEEEEEEEec
Confidence 2467888877632 1 1 135566666654
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=98.64 E-value=1.2e-07 Score=90.34 Aligned_cols=139 Identities=9% Similarity=0.043 Sum_probs=81.1
Q ss_pred CCEEEEEcCCCCCHHH------------HHHHH-HHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEE
Q 008383 3 PPRILLCGDVLGRLNQ------------LFKRV-QSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYF 69 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~------------l~~kv-~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyf 69 (567)
.|||++++|+|..... +.+++ +.+++...+.|+||++||++..... ..++.+++ ..++.|+|+
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~-~~~~~~~l---~~l~~~~~~ 76 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFND-KNEYLRIW---KALPGRKIL 76 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCC-TTSHHHHH---HHSSSEEEE
T ss_pred CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchh-HHHHHHHH---HHCCCCEEE
Confidence 4899999999954321 22232 2333322468999999999754211 22344454 234568999
Q ss_pred EccCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhh
Q 008383 70 IGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALA 149 (567)
Q Consensus 70 v~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~ 149 (567)
|.||||.... .+. ..+ . .+..+.. |..
T Consensus 77 v~GNhD~~~~---~~~-----------~~~-----------~--~l~~~~~------------------------l~~-- 103 (195)
T 1xm7_A 77 VMGNHDKDKE---SLK-----------EYF-----------D--EIYDFYK------------------------IIE-- 103 (195)
T ss_dssp ECCTTCCCHH---HHT-----------TTC-----------S--EEESSEE------------------------EEE--
T ss_pred EeCCCCCchh---hhh-----------hhh-----------h--chhHHHH------------------------HHh--
Confidence 9999986421 111 000 0 0000000 000
Q ss_pred cCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcc
Q 008383 150 EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 211 (567)
Q Consensus 150 ~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fy 211 (567)
..+..|+++|.+|....... ...+...+.+++....+.+.++||.|..+
T Consensus 104 --~~~~~i~~~H~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~~vi~GHtH~~~ 152 (195)
T 1xm7_A 104 --HKGKRILLSHYPAKDPITER-----------YPDRQEMVREIYFKENCDLLIHGHVHWNR 152 (195)
T ss_dssp --ETTEEEEEESSCSSCSSCCS-----------CHHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred --cCCcEEEEEccCCcCCCccc-----------ccchHHHHHHHHHHcCCcEEEECCcCCCC
Confidence 02468999999987653210 01346788888888899999999988654
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.64 E-value=1.2e-08 Score=96.48 Aligned_cols=62 Identities=18% Similarity=0.195 Sum_probs=43.2
Q ss_pred CEEEEEcCCCC--CHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 4 PRILLCGDVLG--RLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 4 ~KILv~GDvhG--~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
|||++++|+|| +...+.+.++.+. .+.|+||++||++.. ++.+++. +.+.|+|+|.||||..
T Consensus 23 mri~~iSD~Hg~~~~~~l~~~l~~~~---~~~D~ii~~GD~~~~------~~~~~l~---~~~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 23 KRFLLISDSHVPVRMASLPDEILNSL---KEYDGVIGLGDYVDL------DTVILLE---KFSKEFYGVHGNMDYP 86 (178)
T ss_dssp EEEEEECCCCBTTTTCCCCHHHHHGG---GGCSEEEESSCBSCH------HHHHHHH---HHTSSEEECCCSSSCG
T ss_pred eEEEEEecccCCCCHHHHHHHHHHHh---cCCCEEEECCCCCCH------HHHHHHH---hcCCCEEEEECCCCcH
Confidence 79999999997 5554444444443 247999999999862 2333432 2236899999999853
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=98.62 E-value=8.9e-08 Score=101.02 Aligned_cols=215 Identities=11% Similarity=0.083 Sum_probs=110.2
Q ss_pred CEEEEEcCCCCCHH---------------HHHHHHHHHHhhcCCCcEEEEecCCC-CC---ChhhHHHHHHHhcccCCCC
Q 008383 4 PRILLCGDVLGRLN---------------QLFKRVQSVNKSAGPFDAVLCVGQFF-PD---SSELLDEFMNYVEGRSEIP 64 (567)
Q Consensus 4 ~KILv~GDvhG~~~---------------~l~~kv~~l~~k~GpfD~vi~~GDff-~~---~~~~~~~~~~~l~g~~~~p 64 (567)
||||+++|+|.... ..++++..+..+. ..|+||++||+| .. .......+.+++......
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~-~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~- 78 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKR-EVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT- 78 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHH-TCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH-
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhc-CCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC-
Confidence 79999999997543 3445544443333 379999999999 42 222223344444333344
Q ss_pred ccEEEEccCCCChHH-HHHHHhccccccCcccCCceecccEEEeCCCCeEEE---cC--eEEEEEecccCCCCCCCCCCC
Q 008383 65 IPTYFIGDYGVGAAK-VLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL---HG--LSVAYLSGRQSSEGQQFGTYS 138 (567)
Q Consensus 65 ~ptyfv~GN~~~~~~-~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~---~G--lrIa~lgG~~~~~~~~~~~~t 138 (567)
+|+|+|.||||.... ++..+. ..+.+|+.++.....+.+ .| +.|.++...... .....+.
T Consensus 79 ~~v~~i~GNHD~~~~~~~~~~~------------~~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~--~~~~~~~ 144 (379)
T 3tho_B 79 APVVVLPGNQDWKGLKLFGNFV------------TSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDES--EALRKNE 144 (379)
T ss_dssp SCEEECCCTTSCTTHHHHHHHH------------HTTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC------CHH
T ss_pred CCEEEEcCCCccccCccccccc------------cccCCcceeecccceEEEEcCCCCEEEEEECCCCCHH--HHhhhhc
Confidence 899999999995431 222221 123467766654444443 35 566666543221 1111122
Q ss_pred HHHHHHHHH-------hhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcc
Q 008383 139 QDDVDALRA-------LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 211 (567)
Q Consensus 139 ~~dv~~L~~-------~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fy 211 (567)
.+..+.+.. .......+.|+++|..+.|....+... .... ..+...+......|+++||.|...
T Consensus 145 ~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~se--------~~~~-~~v~~~~~~~~~dyvalGH~H~~q 215 (379)
T 3tho_B 145 GDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIE--------QGRE-IIINRALIPSVVDYAALGHIHSFR 215 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------------CS-CCBCGGGSCTTSSEEEEESCSSCE
T ss_pred cchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCccCCCCc--------cccc-cccCHHHcCcCCCEEEcccccCCe
Confidence 222222211 111246789999999988753211100 0000 111111112467999999988762
Q ss_pred ccccccCCCCcceeEEEEccCCCC----ccc-ceeEEEeccCCCC
Q 008383 212 AREPYSNVDAVHVTRFLGLAPVGN----KEK-QKFIHALSPTPAA 251 (567)
Q Consensus 212 Er~Py~~~~~~~~TRFI~L~~~g~----~~K-~Kw~yAf~i~p~~ 251 (567)
.. ....+++..|.... ... .|.++-+.+.+..
T Consensus 216 ~~--------~~~~~i~y~GS~~~~~f~E~~~~k~~~lv~~~~~~ 252 (379)
T 3tho_B 216 EI--------QKQPLTIYPGSLIRIDFGEEADEKGAVFVELKRGE 252 (379)
T ss_dssp EE--------EETTEEEECCCSSCCSGGGSSSCCEEEEEECCSSS
T ss_pred Ee--------CCCCcEEecCCCCCCCcccccCCCEEEEEEEcCCC
Confidence 21 11135666665521 112 3666777776543
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.50 E-value=7.9e-07 Score=91.84 Aligned_cols=73 Identities=18% Similarity=0.234 Sum_probs=47.8
Q ss_pred CEEEEEcCCCCCHH------------HHHHHHHHHHhhcCCCcEEEEecCCCCCC---hhhHHHHHHHhcccCCCCccEE
Q 008383 4 PRILLCGDVLGRLN------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDS---SELLDEFMNYVEGRSEIPIPTY 68 (567)
Q Consensus 4 ~KILv~GDvhG~~~------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~---~~~~~~~~~~l~g~~~~p~pty 68 (567)
|||++++|+|.... ..++++-.+..+. ..|+||++||+|... ......+.+++......++|+|
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~ 79 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQE-NVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVF 79 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHT-TCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhc-CCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEE
Confidence 79999999998642 2333333322233 479999999998642 1223344444443345578999
Q ss_pred EEccCCCCh
Q 008383 69 FIGDYGVGA 77 (567)
Q Consensus 69 fv~GN~~~~ 77 (567)
+|.||||..
T Consensus 80 ~v~GNHD~~ 88 (333)
T 1ii7_A 80 AIEGNHDRT 88 (333)
T ss_dssp EECCTTTCC
T ss_pred EeCCcCCCc
Confidence 999999964
|
| >3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=3.8e-07 Score=87.32 Aligned_cols=86 Identities=6% Similarity=0.052 Sum_probs=63.2
Q ss_pred EEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCC------HHHHHHHHHHHH-H-HHHHHHh-----------cCC-
Q 008383 405 IVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTS------PECEKELGRFQN-S-LMMYYKN-----------QGK- 464 (567)
Q Consensus 405 iis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~------~~~~~E~~~~~~-~-L~~~~~~-----------~g~- 464 (567)
||++++.++++++..|.++||+||||++|+.++.... .++..+|..+.. . |.+++.. .|+
T Consensus 23 ~v~edd~~~af~D~~P~a~~H~LVIPk~h~~~~~~p~~al~d~~~Ll~~m~~la~~~~l~~~~~~~~~~~~~~~~~~~~~ 102 (204)
T 3sp4_A 23 VIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQLTNEALC 102 (204)
T ss_dssp EEEECSSEEEEECSSCSSSSEEEEEECCTTTTTSCHHHHHHHCHHHHHHHHHHHHTTTHHHHHHHHHHHSCTTCCHHHHH
T ss_pred EEEEcCCEEEEeCCCCCCCccEEEEeccccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCcCCee
Confidence 8999999999999999999999999999999988642 356777777766 4 5555531 121
Q ss_pred ceEEEE-ecCCCCCeeEEEEeecCcch
Q 008383 465 EAVFFE-WLSKRGTHANLQAVPIPTSK 490 (567)
Q Consensus 465 ~~v~~E-~~~~~~~H~hi~~vPvp~~~ 490 (567)
..+-+. .+.....|+|+|||-.+..-
T Consensus 103 ~~i~~GfHa~PSm~HLHLHVIS~Df~s 129 (204)
T 3sp4_A 103 NYIKVGFHAGPSMNNLHLHIMTLDHVS 129 (204)
T ss_dssp TTEEEEEESSCSSSSCCEEEEESCCCC
T ss_pred eeEeccCCCCCcccceeEEEeccCCCC
Confidence 123333 23344679999999876653
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.31 E-value=1.1e-06 Score=84.81 Aligned_cols=69 Identities=9% Similarity=0.151 Sum_probs=50.0
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChh-------hHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-------LLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~-------~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
|||++++|+||++..+-+.++.+++. +.|+||++||++..... ...++.+++ .+++.|+|+|.||||.
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~--~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l---~~~~~~v~~V~GNHD~ 100 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQS--GAQWLVILGDVLNHGPRNALPEGYAPAKVVERL---NEVAHKVIAVRGNCDS 100 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHH--TCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHH---HTTGGGEEECCCTTCC
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhc--CCCEEEECCCccccCcccccccccCHHHHHHHH---HhcCCceEEEECCCch
Confidence 79999999999988776666666543 36999999999753221 124455555 3445799999999986
Q ss_pred h
Q 008383 77 A 77 (567)
Q Consensus 77 ~ 77 (567)
.
T Consensus 101 ~ 101 (208)
T 1su1_A 101 E 101 (208)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=98.30 E-value=1e-05 Score=86.25 Aligned_cols=205 Identities=12% Similarity=0.034 Sum_probs=112.3
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh------hhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS------ELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~------~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
.+||+++||.|.... ..+.++.+.+.....|+||++||+.-.+. ...+++.++++.. ...+|+|++.||||.
T Consensus 126 ~~~f~~~gD~~~~~~-~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l-~~~~P~~~v~GNHD~ 203 (426)
T 1xzw_A 126 PYVFGLIGDIGQTHD-SNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERS-VAYQPWIWTAGNHEI 203 (426)
T ss_dssp CEEEEEECSCTTBHH-HHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHH-HTTSCEECCCCGGGC
T ss_pred CeEEEEEEeCCCCCc-hHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHH-HhcCCEEEecccccc
Confidence 479999999998743 23345555544335899999999974321 1122344444332 237899999999985
Q ss_pred hHH-----------HHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHH
Q 008383 77 AAK-----------VLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDAL 145 (567)
Q Consensus 77 ~~~-----------~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L 145 (567)
... +...... +..+.....+.+ -.+..++++|.+|...... . ...++.+.|
T Consensus 204 ~~~~~~~~~~~~~~~~~~f~~-------p~~~~~~~~~~~-----ys~~~g~~~~i~Ldt~~~~-----~-~~~~Q~~WL 265 (426)
T 1xzw_A 204 DYAPDIGEYQPFVPFTNRYPT-------PHEASGSGDPLW-----YAIKRASAHIIVLSSYSGF-----V-KYSPQYKWF 265 (426)
T ss_dssp CCBGGGTBCSTTHHHHHHSCC-------CCGGGTCSSTTS-----EEEEETTEEEEECCTTSCC-----S-TTSHHHHHH
T ss_pred ccCCccccccCChhheEEEeC-------CcccCCCCCCCe-----EEEEECCEEEEEeeCcccC-----C-CCHHHHHHH
Confidence 321 1111000 000000001111 1234678888888643210 1 123445555
Q ss_pred HH-hhcC---CCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCC-
Q 008383 146 RA-LAEE---PGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVD- 220 (567)
Q Consensus 146 ~~-~~~~---~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~- 220 (567)
++ ++.. ..+--|+++|.++......... ....-...+.+++.+.+....|+||.|.+.-..|..+..
T Consensus 266 ~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~--------~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~ 337 (426)
T 1xzw_A 266 TSELEKVNRSETPWLIVLVHAPLYNSYEAHYM--------EGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAY 337 (426)
T ss_dssp HHHHHHCCTTTCCEEEEECSSCSSCCBSTTTT--------TTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCC
T ss_pred HHHHHhhhhcCCCEEEEEeccCceeCCCcccC--------CCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccc
Confidence 54 2221 2345699999998754211000 000013466778888999999999998765555644321
Q ss_pred -----------CcceeEEEEccCCCC
Q 008383 221 -----------AVHVTRFLGLAPVGN 235 (567)
Q Consensus 221 -----------~~~~TRFI~L~~~g~ 235 (567)
....|.+|..|.-|+
T Consensus 338 ~~~~g~~~~~~~~~g~~yi~~G~gG~ 363 (426)
T 1xzw_A 338 NIVNAKCTPVSDESAPVYITIGDGGN 363 (426)
T ss_dssp CSTTCCCCCEECTTSCEEEEECCSCC
T ss_pred cccCCccccccCCCccEEEEeCCCcc
Confidence 134577887777665
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.23 E-value=3.7e-05 Score=84.14 Aligned_cols=211 Identities=11% Similarity=0.006 Sum_probs=109.1
Q ss_pred CCEEEEEcCCCCCHH----------HHHHHHHHHHhh---cCCCcEEEEecCCCCCChh----hHHHHHHHhcccCCCCc
Q 008383 3 PPRILLCGDVLGRLN----------QLFKRVQSVNKS---AGPFDAVLCVGQFFPDSSE----LLDEFMNYVEGRSEIPI 65 (567)
Q Consensus 3 ~~KILv~GDvhG~~~----------~l~~kv~~l~~k---~GpfD~vi~~GDff~~~~~----~~~~~~~~l~g~~~~p~ 65 (567)
.++||.++|+||++. .+...++++.+. .+|-+++|.+||++..... ..+.+.+.+ ..++
T Consensus 8 ~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~l---n~lg- 83 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGM---NLVG- 83 (516)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHH---HHHT-
T ss_pred EEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHH---hccC-
Confidence 478999999999743 333444444332 2456899999999754221 011122222 2233
Q ss_pred cEEEEccCCCChH---HHHHHHhccccccCcccCCceecccEEEe-------CCCCeEEEcCeEEEEEecccCCCCC--C
Q 008383 66 PTYFIGDYGVGAA---KVLLAASKNSANQGFKMDGFKVTDNLFWL-------KGSGNFTLHGLSVAYLSGRQSSEGQ--Q 133 (567)
Q Consensus 66 ptyfv~GN~~~~~---~~~~~l~~~~~~~~~~~~~~~i~~Nl~~L-------g~~gv~~~~GlrIa~lgG~~~~~~~--~ 133 (567)
+.+++.||||... .+...+.. .+-..++.|++.- ...-+++.+|++|+.+|-....... .
T Consensus 84 ~d~~~~GNHEfd~g~~~l~~~~~~--------~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~ 155 (516)
T 1hp1_A 84 YDAMAIGNHEFDNPLTVLRQQEKW--------AKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGN 155 (516)
T ss_dssp CCEEECCGGGGSSCHHHHHHHHHH--------CSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSS
T ss_pred CCEEeeccccccCCHHHHHHHHhh--------CCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccC
Confidence 3488999998632 12222221 1123567787642 1224557899999999865432110 0
Q ss_pred C-----CCCC--HHHHHH-HHHhhc-CCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEE
Q 008383 134 F-----GTYS--QDDVDA-LRALAE-EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIA 204 (567)
Q Consensus 134 ~-----~~~t--~~dv~~-L~~~~~-~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~ 204 (567)
+ ..|. .+.++. +..+.. ....+=|+|+|........... ...+...+++.+...++...++
T Consensus 156 p~~~~~~~~~d~~~~~~~~v~~l~~~~~~d~iI~l~H~g~~~~~~~~~----------~~~~~~~la~~~~~~~iDlilg 225 (516)
T 1hp1_A 156 PEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGS----------NAPGDVEMARALPAGSLAMIVG 225 (516)
T ss_dssp CCSCTTEEECCHHHHHHHHHHHHHHHTCCSEEEEEEESCCCGGGCCTT----------SCCCHHHHHHHSCTTSSSEEEC
T ss_pred cCccCCcEEeCHHHHHHHHHHHHHhcCCCCEEEEEecCCccCCCcccc----------cCchHHHHHHhCCCCceeEEEC
Confidence 0 1222 122332 222221 1223447889977654321100 1133444433333334789999
Q ss_pred ccCCCcccc-------ccccCC-----CCcceeEEEEccCCCC
Q 008383 205 GSKGVFYAR-------EPYSNV-----DAVHVTRFLGLAPVGN 235 (567)
Q Consensus 205 Gh~~~fyEr-------~Py~~~-----~~~~~TRFI~L~~~g~ 235 (567)
||.|..+.. .+|... .....|-++..|.+|.
T Consensus 226 GHtH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ag~~g~ 268 (516)
T 1hp1_A 226 GHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGK 268 (516)
T ss_dssp CSSCCBCCEEETTEECSSCCTTSCCCCEEETTEEEECBCSTTS
T ss_pred CCCCcccccCCccccccccCCCccccccCCCCcEEEecChhhh
Confidence 998876542 111110 0123578888888775
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=1.8e-05 Score=84.34 Aligned_cols=187 Identities=13% Similarity=0.068 Sum_probs=101.9
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh------hhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS------ELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~------~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
.+||+++||.|..... .+.++.+.+.....|+||++||+.-.+. ...+++.++++.. ...+|+|++.||||.
T Consensus 119 ~~~f~~igD~~~~~~~-~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~-~~~~P~~~v~GNHD~ 196 (424)
T 2qfp_A 119 PYTFGLIGDLGQSFDS-NTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERS-VAYQPWIWTAGNHEI 196 (424)
T ss_dssp CEEEEEECSCTTBHHH-HHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHH-HTTSCEEECCCHHHH
T ss_pred CeEEEEEEeCCCCCCh-HHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHH-HhcCCeEeecCCccc
Confidence 5799999999987643 3345556554335799999999975421 1123344444332 235899999999983
Q ss_pred hH-----------HHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHH
Q 008383 77 AA-----------KVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDAL 145 (567)
Q Consensus 77 ~~-----------~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L 145 (567)
.. .+...+.. +..+.....+++ -.+++++++|.+|..... ...++ ++.+.|
T Consensus 197 ~~~~~~~~~~~~~~~~~~f~~-------P~~~~~~~~~~~-----ys~~~g~~~~i~Ldt~~~-----~~~~~-~Q~~WL 258 (424)
T 2qfp_A 197 EFAPEINETEPFKPFSYRYHV-------PYEASQSTSPFW-----YSIKRASAHIIVLSSYSA-----YGRGT-PQYTWL 258 (424)
T ss_dssp CCBGGGTBCSTTHHHHHHCCC-------CGGGGTCSSTTS-----EEEEETTEEEEECCTTSC-----CSTTS-HHHHHH
T ss_pred ccCCcccccccchhhhhhccC-------CccccCCCCCcE-----EEEEECCEEEEEecCCcc-----CCCcH-HHHHHH
Confidence 21 00010000 000000001111 134567888888854321 11223 345555
Q ss_pred HH-hhcC---CCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcccccccc
Q 008383 146 RA-LAEE---PGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYS 217 (567)
Q Consensus 146 ~~-~~~~---~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~ 217 (567)
++ ++.. ..+.-|+++|.++........ . ....-...+..++.+.+..+.|+||.|.|--..|..
T Consensus 259 ~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~----~----~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~ 326 (424)
T 2qfp_A 259 KKELRKVKRSETPWLIVLMHSPLYNSYNHHF----M----EGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVS 326 (424)
T ss_dssp HHHHHHCCTTTCCEEEEECSSCSSCCBSTTT----T----TTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEE
T ss_pred HHHHhhhcccCCCEEEEEeCcCceecCcccc----c----ccHHHHHHHHHHHHHhCCcEEEECChhhhheecccc
Confidence 54 2221 234579999998875421100 0 000012456678888999999999998754444543
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=98.04 E-value=7.6e-06 Score=85.06 Aligned_cols=212 Identities=10% Similarity=0.009 Sum_probs=110.2
Q ss_pred CCEEEEEcCCCCCH---HHHHHHHHHHHhhcCCCcEEEEecCCCCCCh------hhHHHHHHHhccc-CCCCccEEEEcc
Q 008383 3 PPRILLCGDVLGRL---NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS------ELLDEFMNYVEGR-SEIPIPTYFIGD 72 (567)
Q Consensus 3 ~~KILv~GDvhG~~---~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~------~~~~~~~~~l~g~-~~~p~ptyfv~G 72 (567)
+++++++||.+..- ..+.+.+.++.++. ++|+||.+||++-.+. .-.+.+...+... ....+|+|.+.|
T Consensus 3 ~l~f~~igD~g~g~~~q~~va~~m~~~~~~~-~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNE-RVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CEEEEECCSCBSCCHHHHHHHHHHHHHHHHT-TCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred eEEEEEEecCCCCCchHHHHHHHHHHHHhhc-CCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 57999999999742 22334444444444 5899999999864321 1112333344332 356899999999
Q ss_pred CCCChHHHHHHHhccc--------------cccCcccCCceecccEEEeCCCCeEEE--------cC-----eEEEEEec
Q 008383 73 YGVGAAKVLLAASKNS--------------ANQGFKMDGFKVTDNLFWLKGSGNFTL--------HG-----LSVAYLSG 125 (567)
Q Consensus 73 N~~~~~~~~~~l~~~~--------------~~~~~~~~~~~i~~Nl~~Lg~~gv~~~--------~G-----lrIa~lgG 125 (567)
|||-.......+.-.. ... -.....|..|+.+|--.. .+++ .| ++|.+|--
T Consensus 82 NHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~-~~~~~rw~~P~~yY~~~~-~f~~~~~~~~~~~g~~~~~v~fi~LDT 159 (342)
T 3tgh_A 82 TRDWTGNYNAQLLKGQGIYIEKNGETSIEKDAD-ATNYPKWIMPNYWYHYFT-HFTVSSGPSIVKTGHKDLAAAFIFIDT 159 (342)
T ss_dssp HHHHTSCHHHHHHHHHC---------------C-CCSSCEEECSSSSEEEEE-EEEEC---------CEEEEEEEEECCT
T ss_pred CCccCCCchHhhhhhhccccccccccccccccc-ccCCCCccCCcceEEEEE-EeeccccccccccCCCCceEEEEEEeC
Confidence 9974322222111000 000 012345666766542100 0111 23 45555533
Q ss_pred ccCCCCCCC----CCCCHHHHHHHHHhhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCE
Q 008383 126 RQSSEGQQF----GTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRY 201 (567)
Q Consensus 126 ~~~~~~~~~----~~~t~~dv~~L~~~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRY 201 (567)
......... ..+.++..+.|+...+ ....=|++.|.++.......+. ..-...+..|+.+.+...
T Consensus 160 ~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~-~~~~~IV~~HhP~~~~~~~~~~----------~~l~~~l~~ll~~~~Vdl 228 (342)
T 3tgh_A 160 WVLSSNFPYKKIHEKAWNDLKSQLSVAKK-IADFIIVVGDQPIYSSGYSRGS----------SYLAYYLLPLLKDAEVDL 228 (342)
T ss_dssp TTTSTTCSCHHHHHHHHHHHHHHHHHHHH-HCSEEEEECSSCSSCSSTTCCC----------HHHHHHTHHHHHHTTCCE
T ss_pred cccccCCcccccchHHHHHHHHHHHHhhc-cCCcEEEEECCCCCCCCCCCCc----------HHHHHHHHHHHHHcCCCE
Confidence 211111000 0111233444443221 2346689999999765322110 011356778899999999
Q ss_pred EEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 202 HIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 202 hf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
.|+||.|.+.-.. ...+.+|..|..+.
T Consensus 229 vlsGH~H~~~~~~-------~~g~~~iv~Ga~g~ 255 (342)
T 3tgh_A 229 YISGHDNNMEVIE-------DNDMAHITCGSGSM 255 (342)
T ss_dssp EEECSSSSEEEEE-------ETTEEEEEECCSSC
T ss_pred EEECCCcceeEEe-------eCCcEEEEeCcccc
Confidence 9999988653322 11388888887654
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.01 E-value=8.3e-05 Score=81.62 Aligned_cols=205 Identities=8% Similarity=0.022 Sum_probs=110.5
Q ss_pred CCEEEEEcCCCCCHH----------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChhhH---------HHHHHHh
Q 008383 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELL---------DEFMNYV 57 (567)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~---------~~~~~~l 57 (567)
+++||.++|+||++. .+...++++.+++ |-.++|.+||++....... ..+.+.+
T Consensus 19 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~-~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~l 97 (527)
T 3qfk_A 19 NIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQY-DQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFY 97 (527)
T ss_dssp EEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTS-SEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHHH
T ss_pred cEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcC-CCEEEEECCCcCCCcHHHHHHhhcccCcchHHHHH
Confidence 478999999999863 5555566665543 4457788999986542110 2222333
Q ss_pred cccCCCCccEEEEccCCCCh---HHHHHHHhccccccCcccCCceecccEEEeC------CCCeEEEcCeEEEEEecccC
Q 008383 58 EGRSEIPIPTYFIGDYGVGA---AKVLLAASKNSANQGFKMDGFKVTDNLFWLK------GSGNFTLHGLSVAYLSGRQS 128 (567)
Q Consensus 58 ~g~~~~p~ptyfv~GN~~~~---~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg------~~gv~~~~GlrIa~lgG~~~ 128 (567)
..++.. +++.||||.. ..+.+.+.. .+-..++.|++..+ ..-+++.+|++|+.+|-...
T Consensus 98 ---n~lg~D-~~t~GNHefd~G~~~l~~~~~~--------~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~ 165 (527)
T 3qfk_A 98 ---NRMAFD-FGTLGNHEFNYGLPYLKDTLRR--------LNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQ 165 (527)
T ss_dssp ---HHTCCC-EECCCGGGGTTCHHHHHHHHHH--------CSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECT
T ss_pred ---HhcCCc-EEeccccccccCHHHHHHHHHh--------CCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccC
Confidence 334443 6778999843 223333321 12235778887531 23455689999999987643
Q ss_pred CCCC-C------CCCCC--HHHHHH-HHHhhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-
Q 008383 129 SEGQ-Q------FGTYS--QDDVDA-LRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI- 197 (567)
Q Consensus 129 ~~~~-~------~~~~t--~~dv~~-L~~~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l- 197 (567)
.... . -..|. .+.++. +..+. ..-.+-|+|+| |+......... +. ....|.....+|++++
T Consensus 166 ~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H-~G~~~d~~~~~---~~---~~~~~e~~~~~la~~~~ 237 (527)
T 3qfk_A 166 FIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYH-GGFEKDLESGT---PT---EVLTGENEGYAMLEAFS 237 (527)
T ss_dssp TGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEE-CCCSBCTTTCC---BS---SCCSSSCCHHHHHHHHG
T ss_pred CcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeC-cCcccccccCc---cc---cccccchHHHHHHHhcC
Confidence 2110 0 01222 122222 22221 11234478888 44322110000 00 0112333455667666
Q ss_pred -CCCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 198 -KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 198 -kPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
.....++||.|..+.. ....|..+..|..|.
T Consensus 238 ~giDlIlgGHtH~~~~~-------~v~~~~ivqag~~g~ 269 (527)
T 3qfk_A 238 KDIDIFITGHQHRQIAE-------RFKQTAVIQPGTRGT 269 (527)
T ss_dssp GGCSEEECCSSCCEEEE-------EETTEEEEEECSTTS
T ss_pred CCCcEEEECCCCcccce-------EECCEEEeccChhhC
Confidence 6789999999876541 234588888888775
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.93 E-value=6.6e-06 Score=79.69 Aligned_cols=67 Identities=15% Similarity=0.182 Sum_probs=48.5
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
.|||+|+||+||++..|.+.++.+... ...|.+|++||+....... .+..+++. . .++++|.||||.
T Consensus 12 ~~~i~visDiHg~~~~l~~~l~~~~~~-~~~d~~i~~GD~~~~g~~~-~~~~~~l~---~--~~~~~v~GNhd~ 78 (221)
T 1g5b_A 12 YRNIWVVGDLHGCYTNLMNKLDTIGFD-NKKDLLISVGDLVDRGAEN-VECLELIT---F--PWFRAVRGNHEQ 78 (221)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCC-TTTCEEEECSCCSSSSSCH-HHHHGGGG---S--TTEEECCCHHHH
T ss_pred CceEEEEEcCCCCHHHHHHHHHHccCC-CCCCEEEEeCCccCCCCCh-HHHHHHHh---c--CCEEEEccCcHH
Confidence 589999999999998877666665432 2479999999997644332 23444442 2 489999999973
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.83 E-value=9.5e-06 Score=82.01 Aligned_cols=68 Identities=18% Similarity=0.210 Sum_probs=47.9
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
|||+|+||+||++..|.+.++.+... .+.|.+|++||+..-..... +..+++ ...+.++++|.||||.
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~-~~~d~~v~lGD~vdrG~~s~-~~l~~l---~~l~~~~~~v~GNHe~ 68 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFT-PGKDTLWLTGDLVARGPGSL-DVLRYV---KSLGDSVRLVLGNHDL 68 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCC-TTTCEEEECSCCSSSSSCHH-HHHHHH---HHTGGGEEECCCHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCC-CCCCEEEEeCCcCCCCCccH-HHHHHH---HhCCCceEEEECCCcH
Confidence 68999999999999887766665432 23699999999976443322 333443 2335589999999973
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.81 E-value=1.4e-05 Score=79.86 Aligned_cols=66 Identities=17% Similarity=0.293 Sum_probs=46.8
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
+||+++||+||+++.|.+.++.+... ++.|.+|++||+........ ++.+++. . .++|+|.||||.
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~-~~~d~ii~~GD~vd~g~~~~-~~l~~l~---~--~~~~~v~GNHd~ 84 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFK-QGSDTLVAVGDLVNKGPDSF-GVVRLLK---R--LGAYSVLGNHDA 84 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCC-TTTSEEEECSCCSSSSSCHH-HHHHHHH---H--HTCEECCCHHHH
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhcc-CCCCEEEEecCCCCCCCCHH-HHHHHHH---H--CCCEEEeCcChH
Confidence 49999999999998777666655432 24699999999976443322 3334432 1 479999999974
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.0022 Score=69.93 Aligned_cols=206 Identities=13% Similarity=0.057 Sum_probs=104.4
Q ss_pred CCEEEEEcCCCCCH------------------HHHHHHHHHHHhhcCCCcEEEE-ecCCCCCChh----hHHHHHHHhcc
Q 008383 3 PPRILLCGDVLGRL------------------NQLFKRVQSVNKSAGPFDAVLC-VGQFFPDSSE----LLDEFMNYVEG 59 (567)
Q Consensus 3 ~~KILv~GDvhG~~------------------~~l~~kv~~l~~k~GpfD~vi~-~GDff~~~~~----~~~~~~~~l~g 59 (567)
.++||.++|+||++ ..+...++++.+++ .|.|++ +||++....- ....+.+.+
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~--~~~llldaGD~~~g~~~~~~~~g~~~~~~l-- 81 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKN--KATWFFDAGDYFTGPYISSLTKGKAIIDIM-- 81 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHC--SSEEEEECSCCSSSSHHHHTTTTHHHHHHH--
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcC--CCeEEEECCCCCCCchhhhhcCChHHHHHH--
Confidence 47899999999874 34455555555544 366666 9998764311 011223333
Q ss_pred cCCCCccEEEEccCCCCh---HHHHHHHhccccccCcccCCceecccEEEeC--------CCCeEEEcCeEEEEEecccC
Q 008383 60 RSEIPIPTYFIGDYGVGA---AKVLLAASKNSANQGFKMDGFKVTDNLFWLK--------GSGNFTLHGLSVAYLSGRQS 128 (567)
Q Consensus 60 ~~~~p~ptyfv~GN~~~~---~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg--------~~gv~~~~GlrIa~lgG~~~ 128 (567)
..++. -+++.||||.. ..+.+.+.. .+-..++.|++.-. ..-|++.+|+||+.+|-...
T Consensus 82 -n~lg~-D~~tlGNHEfd~G~~~l~~~l~~--------~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~ 151 (509)
T 3ive_A 82 -NTMPF-DAVTIGNHEFDHGWDNTLLQLSQ--------AKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGV 151 (509)
T ss_dssp -TTSCC-SEECCCGGGGTTCHHHHHHHHTT--------CSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECH
T ss_pred -HhcCC-cEEeecccccccCHHHHHHHHhh--------CCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccC
Confidence 34443 36778999943 233443431 12235778887532 22355689999999987421
Q ss_pred ------CCCC--CCCCCC--HHHHHH-HHHhhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh
Q 008383 129 ------SEGQ--QFGTYS--QDDVDA-LRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI 197 (567)
Q Consensus 129 ------~~~~--~~~~~t--~~dv~~-L~~~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l 197 (567)
.... .-..|. .+.++. +..+. ..-.+=|+|+|.--.+-.. .. ... ....|...-.++++++
T Consensus 152 ~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk-~~~D~iIvl~H~G~~~~~~-~~---~~~---~~~~~~~~d~~la~~~ 223 (509)
T 3ive_A 152 FAFNDTVSAATRVGIEARDEIKWLQRYIDELK-GKVDLTVALIHEGVPARQS-SM---GGT---DVRRALDKDIQTASQV 223 (509)
T ss_dssp HHHHHHSCGGGCTTEEECCHHHHHHHHHHHHT-TTCSEEEEEEECSSCCCCC-CC---------CCCCCCHHHHHHHHHC
T ss_pred cccccccccccCCCCEEcCHHHHHHHHHHHHH-hcCCEEEEEeccCcCCccc-cc---ccc---ccccccchHHHHHhcC
Confidence 0000 011232 122222 22232 1223335778864111100 00 000 1123444445666665
Q ss_pred C-CCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 198 K-PRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 198 k-PRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
. .-..++||.|..+.. |. ....|-.+..+.+|.
T Consensus 224 ~giDlIlgGHtH~~~~~-~~----~~~~~~ivqag~~g~ 257 (509)
T 3ive_A 224 KGLDILITGHAHVGTPE-PI----KVGNTLILSTDSGGI 257 (509)
T ss_dssp SSCCEEEEESSCCCCSS-CE----EETTEEEECCCSTTS
T ss_pred CCCcEEEeCCcCccCCC-Ce----eeCCEEEEecChhhc
Confidence 3 678999998865331 11 122466676666654
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00015 Score=77.94 Aligned_cols=75 Identities=19% Similarity=0.266 Sum_probs=47.2
Q ss_pred CCCEEEEEcCCCCCH-----------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChh-------hHHHHHHH-------
Q 008383 2 SPPRILLCGDVLGRL-----------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-------LLDEFMNY------- 56 (567)
Q Consensus 2 ~~~KILv~GDvhG~~-----------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~-------~~~~~~~~------- 56 (567)
..||||+++|+|-.. ...++++-.+..+. ..|+||++||+|..... ..+.|.+|
T Consensus 75 ~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~-~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~~~ 153 (472)
T 4fbk_A 75 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARER-DVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPC 153 (472)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHT-TCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSCCC
T ss_pred CCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhc-CCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcc
Confidence 368999999999741 12333333333333 47999999999875321 12233343
Q ss_pred ----hcc------------------cCCCCccEEEEccCCCCh
Q 008383 57 ----VEG------------------RSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 57 ----l~g------------------~~~~p~ptyfv~GN~~~~ 77 (567)
|+. ...+.+|+|+|.||||.+
T Consensus 154 ~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 154 ELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp CCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred hheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 211 114589999999999875
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00019 Score=76.36 Aligned_cols=75 Identities=19% Similarity=0.259 Sum_probs=46.8
Q ss_pred CCEEEEEcCCCCCH-----------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChh-------hHHHHHHH--------
Q 008383 3 PPRILLCGDVLGRL-----------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-------LLDEFMNY-------- 56 (567)
Q Consensus 3 ~~KILv~GDvhG~~-----------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~-------~~~~~~~~-------- 56 (567)
.||||.++|+|-.. ...++++-.+..+. ..|+||++||+|..... ..+.+.+|
T Consensus 13 ~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~-~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~~~~ 91 (417)
T 4fbw_A 13 TIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARER-DVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPCE 91 (417)
T ss_dssp CEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHT-TCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSCCCC
T ss_pred CeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhc-CCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCccc
Confidence 68999999999752 23344433333333 47999999999875321 12233333
Q ss_pred ---hc------------------ccCCCCccEEEEccCCCChH
Q 008383 57 ---VE------------------GRSEIPIPTYFIGDYGVGAA 78 (567)
Q Consensus 57 ---l~------------------g~~~~p~ptyfv~GN~~~~~ 78 (567)
|+ ....+.+|+|+|.||||.+.
T Consensus 92 ~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~ 134 (417)
T 4fbw_A 92 LELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPS 134 (417)
T ss_dssp CEECC------------CCGGGCTTBCBSSCEEECCCGGGC--
T ss_pred ceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcc
Confidence 21 01245899999999998753
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00024 Score=75.86 Aligned_cols=74 Identities=19% Similarity=0.295 Sum_probs=46.1
Q ss_pred CCEEEEEcCCCCCH-----------HHHHHHHHHHHhhcCCCcEEEEecCCCCCCh---hhHH----HHHHHhcc-----
Q 008383 3 PPRILLCGDVLGRL-----------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS---ELLD----EFMNYVEG----- 59 (567)
Q Consensus 3 ~~KILv~GDvhG~~-----------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~---~~~~----~~~~~l~g----- 59 (567)
.||||+++|+|-.. ...++++-.+..+. ..|+||++||+|.... .... .|.+|-.|
T Consensus 32 ~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~-~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~~~ 110 (431)
T 3t1i_A 32 TFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQEN-EVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRPVQ 110 (431)
T ss_dssp EEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHT-TCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSCCC
T ss_pred CEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhc-CCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCccc
Confidence 48999999999532 12333433333333 4799999999987532 2222 23332111
Q ss_pred ------------------------cCCCCccEEEEccCCCCh
Q 008383 60 ------------------------RSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 60 ------------------------~~~~p~ptyfv~GN~~~~ 77 (567)
...+.+|+|+|.||||.+
T Consensus 111 ~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 111 FEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp CEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred ceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 124689999999999976
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00012 Score=74.86 Aligned_cols=74 Identities=14% Similarity=0.191 Sum_probs=49.7
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.+||.|+||+||++..|.+.++...... .-+.+|++||+..-++...+.+.-++.-....|-.++++-||||..
T Consensus 59 ~~ri~viGDIHG~~~~L~~ll~~~g~~~-~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 59 TEKITVCGDTHGQFYDLLNIFELNGLPS-ETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETD 132 (315)
T ss_dssp TCEEEEECCCTTCHHHHHHHHHHHCCCB-TTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CceEEEEecCCCCHHHHHHHHHHhCCCC-CCCEEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccc
Confidence 4789999999999998887665443221 2356999999987655433333322221233466799999999964
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=97.51 E-value=8.7e-05 Score=75.94 Aligned_cols=72 Identities=14% Similarity=0.240 Sum_probs=49.6
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcc-cCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEG-RSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g-~~~~p~ptyfv~GN~~~~ 77 (567)
.++|.|+||+||++..|.+.++.+.. .+.|.+|++||+..-++...+. ..++.. ....|-.++++-||||..
T Consensus 49 ~~~i~viGDIHG~~~~L~~ll~~~~~--~~~~~~vflGD~VDRG~~s~ev-l~lL~~lk~~~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 49 RCPVTVCGDVHGQFHDLMELFRIGGK--SPDTNYLFMGDYVDRGYYSVET-VTLLVALKVRYRERITILRGNHESR 121 (309)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHCC--TTTSCEEECSCCSSSSTTHHHH-HHHHHHHHHHCTTTEEECCCTTSST
T ss_pred cCCEEEEecCCCCHHHHHHHHHHcCC--CCCCEEEEeCCccCCCCChHHH-HHHHHHHHhhCCCcEEEEeCCCCHH
Confidence 46899999999999988766654432 2457889999998655443333 333321 223466799999999974
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00012 Score=78.99 Aligned_cols=74 Identities=14% Similarity=0.187 Sum_probs=50.5
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.|||+||||+||++..|.+.++.+... ++-|.+|++||+..-++...+.+.-++.-....|-.++++-||||..
T Consensus 212 ~~~~~vigDiHG~~~~l~~~l~~~~~~-~~~~~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~ 285 (477)
T 1wao_1 212 TEKITVCGDTHGQFYDLLNIFELNGLP-SETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETD 285 (477)
T ss_dssp SCEEEEECBCTTCHHHHHHHHHHHCCC-BTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CcceEEEeCCCCCHHHHHHHHHHcCCC-CCcCeEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHH
Confidence 379999999999999887666654321 23467999999976554433333333221234577899999999964
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00014 Score=74.96 Aligned_cols=74 Identities=16% Similarity=0.211 Sum_probs=50.3
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.|||.||||+||++..|.+.++.+.... +-+.+|++||+..-+....+.+.-++.-....|-.++++-||||..
T Consensus 63 ~~ri~viGDIHG~~~~L~~ll~~~g~~~-~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~ 136 (335)
T 3icf_A 63 DVKISVCGDTHGQFYDVLNLFRKFGKVG-PKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESD 136 (335)
T ss_dssp TCEEEEECCCTTCHHHHHHHHHHHCCCB-TTEEEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred CceEEEEecCCCCHHHHHHHHHHcCCCC-CCcEEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhh
Confidence 4789999999999998887666543211 2356999999987655434333333222234566799999999964
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=97.46 E-value=8.5e-05 Score=77.09 Aligned_cols=73 Identities=10% Similarity=0.079 Sum_probs=48.9
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhc------CCCcEEEEecCCCCCChhhHHHHHHHhcccC----CCCccEEEEcc
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSA------GPFDAVLCVGQFFPDSSELLDEFMNYVEGRS----EIPIPTYFIGD 72 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~------GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~----~~p~ptyfv~G 72 (567)
.|||+|+||+||++..|.+.++.+..-. ...|.+|++||+..-+.... +...++.... ..|..++++.|
T Consensus 70 ~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~-evl~~l~~l~~~~~~~~~~v~~v~G 148 (342)
T 2z72_A 70 IKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVN-EVLWFMYQLDQQARDAGGMVHLLMG 148 (342)
T ss_dssp CCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHH-HHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHH-HHHHHHHHHHHHHhhCCCeEEEEec
Confidence 4799999999999988776555433110 13699999999976443322 2333332212 45678999999
Q ss_pred CCCC
Q 008383 73 YGVG 76 (567)
Q Consensus 73 N~~~ 76 (567)
|||.
T Consensus 149 NHE~ 152 (342)
T 2z72_A 149 NHEQ 152 (342)
T ss_dssp HHHH
T ss_pred CCcH
Confidence 9984
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0001 Score=75.97 Aligned_cols=73 Identities=15% Similarity=0.283 Sum_probs=50.2
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.++|.||||+||++..|.+.++.+.. .+-|.+|++||+..-+....+.+.-++.-....|-.++++-||||..
T Consensus 56 ~~~i~viGDIHG~~~~L~~ll~~~g~--~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 56 EAPLKICGDIHGQYYDLLRLFEYGGF--PPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp CSSEEEECBCTTCHHHHHHHHHHHCS--TTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cCceEEecCCCCCHHHHHHHHHHhCC--CCcceEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHh
Confidence 46899999999999988776665432 24688999999976544433333222211123466799999999965
|
| >1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.001 Score=69.13 Aligned_cols=111 Identities=12% Similarity=0.097 Sum_probs=72.3
Q ss_pred CCccccCCCCCCcceEEE-----ECCEEEEEecCCCCCC------------C-----------eEEEEeccccCCCCCCC
Q 008383 390 ECWFCLSSPSVESHLIVS-----VGEYYYCALPKGPLVE------------D-----------HVLVIPVEHVPNTISTS 441 (567)
Q Consensus 390 ~C~FC~~~~~~~~hliis-----~g~~~yl~l~kgpl~~------------g-----------H~LIiP~~H~~s~~~~~ 441 (567)
.|.||-.+......-|.. -+-.++++..+.|..+ | ++||.+-.|..++.+|+
T Consensus 62 ~CpfCpg~~~~t~~e~~~~~~~~~~~~~~v~~N~fP~l~~~~~~~~~~~~~~l~~~~~~~G~~~Vii~sp~H~~~l~~ls 141 (351)
T 1z84_A 62 SCPFCIGREQECAPELFRVPDHDPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVHSIQLSDID 141 (351)
T ss_dssp CCTTSTTCGGGSSCEEEEESTTCSSCSEEEEECSSCSSBGGGTTTC--------CEEECBCEEEEEECCSSSSCCGGGSC
T ss_pred CCcCCCCCcccCCcccccccccCCCceEEEEcCCCccccCCCCCcccccccchhhccccCcceEEEEeCCCCCCCcHHCC
Confidence 799998765432122333 2467899999999773 5 88999999999999999
Q ss_pred HHHHHHHHHHH-HHHHHHHHhcCC-ceEEEEec----CCCCCeeEEEEeecCcc---h---hhHHHHHHHH
Q 008383 442 PECEKELGRFQ-NSLMMYYKNQGK-EAVFFEWL----SKRGTHANLQAVPIPTS---K---AAAVQDIFNL 500 (567)
Q Consensus 442 ~~~~~E~~~~~-~~L~~~~~~~g~-~~v~~E~~----~~~~~H~hi~~vPvp~~---~---~~~~~~~F~~ 500 (567)
.+.+.++..+- +.+..+.+..+. -+.+||+. +-...|.|.|++-.|.- . ...++.||++
T Consensus 142 ~~e~~~vi~~~~~~~~~L~~~~~~~yv~iF~N~G~~aGaSl~HpH~QI~a~~~~p~~~~~e~~~~~~y~~~ 212 (351)
T 1z84_A 142 PVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALPVVPPTVSSRLDGTKDYFEE 212 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCEEEEEEEcCcccCCCCcCccceeEecCcCChHHHHHHHHHHHHHhh
Confidence 99888888764 444444333343 45667732 22246888888864432 1 2345566655
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00015 Score=73.81 Aligned_cols=73 Identities=15% Similarity=0.292 Sum_probs=50.3
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.++|.|+||+||++..|.+.++..... +.|.+|++||+..-++...+.+.-++.-....|-.++++-||||..
T Consensus 55 ~~~i~viGDIHG~~~~L~~ll~~~g~~--~~~~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 55 EAPLKICGDIHGQYYDLLRLFEYGGFP--PESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp CSSEEEECBCTTCHHHHHHHHHHHCST--TSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CCCEEEEecCCCCHHHHHHHHHHhCCC--CCccEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhh
Confidence 467999999999999887766544322 4688999999987654433333322221234566799999999964
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00028 Score=76.29 Aligned_cols=73 Identities=14% Similarity=0.230 Sum_probs=49.5
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.++|.||||+||++..|.+.++ +.. ..+-|.+|++||+..-+....+.+.-++.-....|-.++++-||||..
T Consensus 82 ~~pI~VIGDIHGq~~dL~~LL~-~~g-~p~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 82 DAPVTVCGDIHGQFFDLMKLFE-VGG-SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp CSSEEEECCCTTCHHHHHHHHH-HHC-CTTTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCCHHHHHHHHH-hcC-CCCcceEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHH
Confidence 4689999999999998886655 222 225699999999976544433333222211123456699999999964
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00034 Score=72.63 Aligned_cols=73 Identities=12% Similarity=0.200 Sum_probs=49.7
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.++|.|+||+||++..|.+.++... ..+-|.+|++||+..-+....+.+.-++.-....|-.++++-||||..
T Consensus 69 ~~pi~ViGDIHG~~~dL~~ll~~~g--~~~~~~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 69 DAPVTVCGDIHGQFFDLMKLFEVGG--SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHC--CTTTCCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred cccceeeccCCCCHHHHHHHHHhcC--CCCCcEEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhh
Confidence 3579999999999998876554322 224688999999987654433333322221234566799999999964
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.041 Score=60.59 Aligned_cols=204 Identities=9% Similarity=-0.054 Sum_probs=106.2
Q ss_pred CCEEEEEcCCCCCH----------------HHHHHHHHHHHhhcCCCc-EEEEecCCCCCChhh------HHHHHHHhcc
Q 008383 3 PPRILLCGDVLGRL----------------NQLFKRVQSVNKSAGPFD-AVLCVGQFFPDSSEL------LDEFMNYVEG 59 (567)
Q Consensus 3 ~~KILv~GDvhG~~----------------~~l~~kv~~l~~k~GpfD-~vi~~GDff~~~~~~------~~~~~~~l~g 59 (567)
.++||.++|+||++ ..+...++++.++.++ | ++|-.||++....-. .....+.+
T Consensus 15 ~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~-~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~l-- 91 (557)
T 3c9f_A 15 DINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQ-DLLLIDSGDRHDGNGLSDITSPNGLKSTPIF-- 91 (557)
T ss_dssp SEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTC-EEEEEECSCCCSSCHHHHSSSSTTTTTHHHH--
T ss_pred EEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCC-CEEEEecCCCCCCccchhhcccCCHHHHHHH--
Confidence 47899999999975 3344444443323444 6 579999997642100 00112222
Q ss_pred cCCCCccEEEEccCCCChHH------HHHHHhccccccCcccCCceecccEEEeC----------CCCeEEE--cCeEEE
Q 008383 60 RSEIPIPTYFIGDYGVGAAK------VLLAASKNSANQGFKMDGFKVTDNLFWLK----------GSGNFTL--HGLSVA 121 (567)
Q Consensus 60 ~~~~p~ptyfv~GN~~~~~~------~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg----------~~gv~~~--~GlrIa 121 (567)
..+++. +++.||||.... +...+.. .+...++.|+.+.. ..-+++. +|+||+
T Consensus 92 -n~lg~D-a~tlGNHEfD~G~~~l~~~~~~l~~--------a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIg 161 (557)
T 3c9f_A 92 -IKQDYD-LLTIGNHELYLWENSKQEYETVVNH--------FQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVM 161 (557)
T ss_dssp -TTSCCS-EECCCGGGSSSHHHHHHHHHHHHHH--------TTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEE
T ss_pred -HhcCCC-EEeecchhcccchHHHHHHHHHHHh--------CCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEE
Confidence 445544 567799997522 2222221 12335777887632 2345577 899999
Q ss_pred EEecccCCCCC-CCCCCC-HHH-HH--HHHHhhcCCCCcc--EEEeCCCCcc-ccccccccccccccCCCCCCcHHHHHH
Q 008383 122 YLSGRQSSEGQ-QFGTYS-QDD-VD--ALRALAEEPGIVD--LFLTNEWPSG-VTNKAAASDMLVGISDSSNTDSTVSEL 193 (567)
Q Consensus 122 ~lgG~~~~~~~-~~~~~t-~~d-v~--~L~~~~~~~~~vD--ILLTh~wP~g-I~~~~~~~~~~~~~~~~~~Gs~~i~~l 193 (567)
.+|=....... ....|. ..+ ++ .+..+. ..++| |+|+|. +.. -. + .. ......+
T Consensus 162 iiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~--~~~~D~IIvL~H~-G~~~~~---d-----------~~-~~~~~~l 223 (557)
T 3c9f_A 162 AFGFLFDFKRFNSGTRVTPMAETIHEPWFQEAL--KHEVDLIIIVGHT-PISHNW---G-----------EF-YQVHQYL 223 (557)
T ss_dssp EEECCCCCCCCCTTEEECCHHHHTTSHHHHHHT--TSCCSEEEEECSS-CCCTTT---C-----------HH-HHHHHHH
T ss_pred EEEeecCCCCCCCCcEECCHHHHHHHHHHHHHH--hcCCCEEEEeccc-CccccC---c-----------cc-cHHHHHH
Confidence 99865431111 011232 222 12 233322 23566 566774 331 10 0 01 2334455
Q ss_pred HHHhCCC---EEEEccCCCccccccccCCCCcceeEEEEccCCCCcccceeEEEeccCC
Q 008383 194 VAEIKPR---YHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPTP 249 (567)
Q Consensus 194 ~~~lkPR---Yhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~~K~Kw~yAf~i~p 249 (567)
++.+ |- ..|.||.|.... .+|.+ .|-.+..|.++. ++--++|+-
T Consensus 224 A~~~-~giDilIlgGHtH~~~~-~~~~~-----~t~ivqaG~~g~-----~lG~l~l~~ 270 (557)
T 3c9f_A 224 RQFF-PDTIIQYFGGHSHIRDF-TVFDS-----LSTGLQSGRYCE-----TVGWTSVNL 270 (557)
T ss_dssp HHHC-TTSEEEEEECSSCCEEE-EEEET-----TEEEEEECSTTS-----EEEEEEECC
T ss_pred HHhC-CCCCEEEECCCCCCCCc-ceecC-----CeEeeeccchhc-----EEEEEEEEE
Confidence 5554 43 478999887633 23322 466677777764 666566554
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=96.76 E-value=0.038 Score=60.92 Aligned_cols=162 Identities=10% Similarity=0.032 Sum_probs=81.8
Q ss_pred Cc-EEEEecCCCCCChhh----HHHHHHHhcccCCCCccEEEEccCCCCh---HHHHHHHhccccccCcccCCceecccE
Q 008383 33 FD-AVLCVGQFFPDSSEL----LDEFMNYVEGRSEIPIPTYFIGDYGVGA---AKVLLAASKNSANQGFKMDGFKVTDNL 104 (567)
Q Consensus 33 fD-~vi~~GDff~~~~~~----~~~~~~~l~g~~~~p~ptyfv~GN~~~~---~~~~~~l~~~~~~~~~~~~~~~i~~Nl 104 (567)
.| ++|.+||++...... .....+.+ ..++.+. ++ ||||.. ..+...+.. .+-..++.|+
T Consensus 123 pd~Lll~~GD~~~gs~~~~~~~g~~~~~~l---n~lg~d~-~~-GNHEfd~G~~~l~~~l~~--------~~~p~L~aNv 189 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSGLSLLTRGEAVVRWQ---NLVGVDH-MV-SHWEWTLGRERVEELLGL--------FRGEFLSYNI 189 (562)
T ss_dssp CCEEEEECSCCSSSSHHHHHHTTHHHHHHH---HHHTCCE-EC-CSGGGGGCHHHHHHHHHH--------CCSEECCSSC
T ss_pred CCEEEEeCCCCCCcchhhhhhCCHHHHHHH---HhhCCcE-Ee-cchhcccCHHHHHHHHHh--------CCCCEEEEEE
Confidence 37 899999998653210 11222333 3445665 47 999953 222232321 1223466676
Q ss_pred EEeC-------CCCeEEEcCeEEEEEecccCC-----CCC--CCCCCC--HHHHHHH-HHhhcCCCCccEEEeCCCCccc
Q 008383 105 FWLK-------GSGNFTLHGLSVAYLSGRQSS-----EGQ--QFGTYS--QDDVDAL-RALAEEPGIVDLFLTNEWPSGV 167 (567)
Q Consensus 105 ~~Lg-------~~gv~~~~GlrIa~lgG~~~~-----~~~--~~~~~t--~~dv~~L-~~~~~~~~~vDILLTh~wP~gI 167 (567)
..-. ..-+++.+|++|+.+|-.... +.. ....|. .+.++.+ ..+......+=|+|+|.... .
T Consensus 190 ~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~iIvLsH~g~~-~ 268 (562)
T 2wdc_A 190 VDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARAEGANAVVLLSHNGMQ-L 268 (562)
T ss_dssp EETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHHTTCSEEEEEECSCHH-H
T ss_pred EecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHHCCCCEEEEEeCCCCc-c
Confidence 6431 223556899999999865321 000 011232 3334332 22322122344788885421 1
Q ss_pred cccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 168 TNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
. .++++++ ..-..|+||.|..+.. .. ....|-.+.-|.+|.
T Consensus 269 d----------------------~~la~~~~giDlIlgGHtH~~~~~---~~--~~~~t~vvqag~~g~ 310 (562)
T 2wdc_A 269 D----------------------AALAERIRGIDLILSGHTHDLTPR---PW--RVGKTWIVAGSAAGK 310 (562)
T ss_dssp H----------------------HHHHTTSSSCCEEEECSSCCCCSS---CE--EETTEEEEECCSTTC
T ss_pred h----------------------HHHHhcCCCCcEEEeCCCCCCCcc---CE--EECCEEEEecCcccc
Confidence 0 1233332 4568999998876532 11 113477788887775
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.007 Score=66.57 Aligned_cols=114 Identities=14% Similarity=0.062 Sum_probs=67.9
Q ss_pred CCEEEEEcCCCCCH--------------------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChhh----HHHHHHHhc
Q 008383 3 PPRILLCGDVLGRL--------------------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL----LDEFMNYVE 58 (567)
Q Consensus 3 ~~KILv~GDvhG~~--------------------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~----~~~~~~~l~ 58 (567)
.++||.++|+||++ ..+...++++.+++ |-+++|.+||++...... ...+.+.+
T Consensus 25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~-~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l- 102 (546)
T 4h2g_A 25 ELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAE-PNVLLLDAGDQYQGTIWFTVYKGAEVAHFM- 102 (546)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHC-SSEEEEECSCCSSSSHHHHHHTTHHHHHHH-
T ss_pred EEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhC-CCEEEEECCccCCCchhhhhhCChHHHHHH-
Confidence 36899999999864 45666666666554 458999999987653210 01122222
Q ss_pred ccCCCCccEEEEccCCCChHHHHHHHh-ccccccCcccCCceecccEEEeC-----------CCCeEEEcCeEEEEEecc
Q 008383 59 GRSEIPIPTYFIGDYGVGAAKVLLAAS-KNSANQGFKMDGFKVTDNLFWLK-----------GSGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 59 g~~~~p~ptyfv~GN~~~~~~~~~~l~-~~~~~~~~~~~~~~i~~Nl~~Lg-----------~~gv~~~~GlrIa~lgG~ 126 (567)
..++.. +++.||||.... .+.+. ..-. ..+-..++.|+...+ ..-|++.+|+||+.+|=.
T Consensus 103 --n~lg~d-~~~~GNHEfd~g-~~~l~~~~~~----~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~ 174 (546)
T 4h2g_A 103 --NALRYD-AMALGNHEFDNG-VEGLIEPLLK----EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYT 174 (546)
T ss_dssp --HHHTCS-EEECCGGGGTTH-HHHHHTTTTT----TCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEEE
T ss_pred --HhcCCc-EEeccCcccccC-HHHHHHHHHh----hcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEec
Confidence 233333 688899985422 12121 1000 012346788887643 234556899999999855
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.035 Score=61.39 Aligned_cols=110 Identities=16% Similarity=0.045 Sum_probs=64.8
Q ss_pred CEEEEEcCCCCCHH---------------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChh----hHHHHHHHhc
Q 008383 4 PRILLCGDVLGRLN---------------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----LLDEFMNYVE 58 (567)
Q Consensus 4 ~KILv~GDvhG~~~---------------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~----~~~~~~~~l~ 58 (567)
++||.++|+||++. .+...++++.+++ +-.++|..||++..... ......+.+
T Consensus 13 l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~-~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l- 90 (579)
T 3ztv_A 13 LSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKY-KNPLVLHAGDAITGTLYFTLFGGSADAAVM- 90 (579)
T ss_dssp EEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHS-SSEEEEECSCCSCSSHHHHTTTTHHHHHHH-
T ss_pred EEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCceeeeecCCHHHHHHH-
Confidence 78999999999853 3445555555544 44699999999764310 001122222
Q ss_pred ccCCCCccEEEEccCCCChHH---HHHHHhccccccCcccCCceecccEEEeCC---------CCeEEEcCeEEEEEecc
Q 008383 59 GRSEIPIPTYFIGDYGVGAAK---VLLAASKNSANQGFKMDGFKVTDNLFWLKG---------SGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 59 g~~~~p~ptyfv~GN~~~~~~---~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~---------~gv~~~~GlrIa~lgG~ 126 (567)
..++. -+++.||||.... +...+.. .+-..++.|++.... .-|++.+|++|+.+|-.
T Consensus 91 --n~lg~-D~~tlGNHEfd~G~~~l~~~~~~--------~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t 159 (579)
T 3ztv_A 91 --NAGNF-HYFTLGNHEFDAGNEGLLKLLEP--------LKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLD 159 (579)
T ss_dssp --HHHTC-SEEECCSGGGTTHHHHHHHHHTT--------CCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEE
T ss_pred --HhcCc-CeeeccccccccCHHHHHHHHHh--------cCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEE
Confidence 22333 3578899985422 2222221 123467888875321 23456799999999874
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.043 Score=60.31 Aligned_cols=111 Identities=10% Similarity=-0.082 Sum_probs=65.6
Q ss_pred CCEEEEEcCCCCCH-----------------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChh----hHHHHHHHhcccC
Q 008383 3 PPRILLCGDVLGRL-----------------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----LLDEFMNYVEGRS 61 (567)
Q Consensus 3 ~~KILv~GDvhG~~-----------------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~----~~~~~~~~l~g~~ 61 (567)
.++||.++|+||++ ..+...++++.+.+ |-.++|..||++..... ....+.+.+ .
T Consensus 29 ~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~-~~~l~l~~GD~~~gs~~~~~~~~~~~~~~l---n 104 (552)
T 2z1a_A 29 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARA-KNPLFLDAGDVFQGTLYFNQYRGLADRYFM---H 104 (552)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHS-SSEEEEECSCCSSSSHHHHHHTTHHHHHHH---H
T ss_pred eEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCcHHHHHhCCcHHHHHH---H
Confidence 37899999999864 35556666666554 42488999999765321 011222332 3
Q ss_pred CCCccEEEEccCCCCh---HHHHHHHhccccccCcccCCceecccEEEeC---------CCCeEEEcCeEEEEEecc
Q 008383 62 EIPIPTYFIGDYGVGA---AKVLLAASKNSANQGFKMDGFKVTDNLFWLK---------GSGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 62 ~~p~ptyfv~GN~~~~---~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg---------~~gv~~~~GlrIa~lgG~ 126 (567)
.++. .+++.||||.. ..+.+.+.. .+-..++.|+..-+ ..-+++.+|++|+.+|=.
T Consensus 105 ~lg~-d~~~lGNHEfd~g~~~l~~~l~~--------~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~ 172 (552)
T 2z1a_A 105 RLRY-RAMALGNHEFDLGPGPLADFLKG--------ARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLT 172 (552)
T ss_dssp HTTC-CEEECCGGGGTTCHHHHHHHHTT--------CCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEE
T ss_pred hcCC-CccccccccccCCHHHHHHHHhh--------CCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEec
Confidence 3333 47889999864 223333331 12235667776422 122556789999998754
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0036 Score=62.98 Aligned_cols=72 Identities=15% Similarity=0.183 Sum_probs=43.5
Q ss_pred CCCCEEEEEcCCCCCH--HHHHHHHHHHHhhcCCCcEEEEecCCCCCC-hhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 1 MSPPRILLCGDVLGRL--NQLFKRVQSVNKSAGPFDAVLCVGQFFPDS-SELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 1 M~~~KILv~GDvhG~~--~~l~~kv~~l~~k~GpfD~vi~~GDff~~~-~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
|.+||||++||+||+. ..+...+.++.++.. .|++|+-||.+..+ .-.......+ ..+++- ..+.|||+-.
T Consensus 2 ~~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~-~d~vi~Ngen~~gG~g~~~~~~~~l----n~~G~D-a~TlGNHefD 75 (281)
T 1t71_A 2 MNSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQ-ADLVIVNAENTTHGKGLSLKHYEFL----KEAGVN-YITMGNHTWF 75 (281)
T ss_dssp CCCCEEEEECEEBHHHHHHHHHTTHHHHHHHHT-CSEEEEECTBTTTTSSCCHHHHHHH----HHHTCC-EEECCTTTTC
T ss_pred cceEEEEEECCcCChHHHHHHHHHHHHHHHhcC-CCEEEEcCCCCCCCCCcCHHHHHHH----HhcCCC-EEEEccCccc
Confidence 6689999999999973 445556666665543 59999999864321 1111222222 223343 3455799865
Q ss_pred H
Q 008383 78 A 78 (567)
Q Consensus 78 ~ 78 (567)
.
T Consensus 76 ~ 76 (281)
T 1t71_A 76 Q 76 (281)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=95.41 E-value=0.12 Score=53.36 Aligned_cols=113 Identities=10% Similarity=-0.034 Sum_probs=63.9
Q ss_pred CCEEEEEcCCCCCHH----------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHH-----------
Q 008383 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMN----------- 55 (567)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~----------- 55 (567)
+++||.++|+||++. ++-..++++.+++ +-.++|-.||++....- ..+..
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~-~n~llld~GD~~qGs~~--~~~~~~~~~~~g~~~p 84 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEV-KNSVLVDNGDVIQGSPL--GDYMAAKGLKEGDVHP 84 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTC-SCEEEEECSCCSSSSHH--HHHHHHHCCCTTCCCH
T ss_pred eEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhC-CCEEEEECCCCCCCchh--HHhhhhcccccccchH
Confidence 468999999999863 3444455544443 44688999999764321 11110
Q ss_pred HhcccCCCCccEEEEccCCCCh---HHHHHHHhccccccCcccCCceecccEEEe-------CCCCeEEE-----c----
Q 008383 56 YVEGRSEIPIPTYFIGDYGVGA---AKVLLAASKNSANQGFKMDGFKVTDNLFWL-------KGSGNFTL-----H---- 116 (567)
Q Consensus 56 ~l~g~~~~p~ptyfv~GN~~~~---~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~L-------g~~gv~~~-----~---- 116 (567)
.+.-...++.- +++.||||.. ..+...+.. .+-..++.|++.- ....|++. +
T Consensus 85 ~~~~mn~lg~D-~~t~GNHEfd~G~~~l~~~~~~--------a~fp~l~aNv~~~~~g~~~~~py~I~~~~v~~~~G~~~ 155 (339)
T 3jyf_A 85 VYKAMNTLNYA-VGNLGNHEFNYGLDFLHKALAG--------AKFPYVNANIIDAKTGKPMFTPYLIQDTRVVDSDGQIH 155 (339)
T ss_dssp HHHHHTTSCCS-EEECCGGGGTTCHHHHHHHHHT--------CSSCEECSSEEETTTSSBSSCCEEEEEEEEECTTSCEE
T ss_pred HHHHHHhcCCC-EEecchhhhhccHHHHHHHHHh--------cCCceeeeeeeecCCCCcccCCeEEEEEEeeccCCCcC
Confidence 11111344443 5677999953 223333321 1234688888762 12234444 4
Q ss_pred CeEEEEEeccc
Q 008383 117 GLSVAYLSGRQ 127 (567)
Q Consensus 117 GlrIa~lgG~~ 127 (567)
|+|||.+|=.-
T Consensus 156 gvkIgviG~~~ 166 (339)
T 3jyf_A 156 TLRIGYIGFVP 166 (339)
T ss_dssp EEEEEEEEECC
T ss_pred CeEEEEEeccc
Confidence 69999998663
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=95.13 E-value=0.086 Score=54.36 Aligned_cols=112 Identities=10% Similarity=-0.063 Sum_probs=63.2
Q ss_pred CCEEEEEcCCCCCHH----------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChhh----H------------
Q 008383 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL----L------------ 50 (567)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~----~------------ 50 (567)
+++||.++|+||++. ++-..++++.+++ +-.++|-.||++....-. .
T Consensus 11 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~-~~~llld~GD~~qGs~~~~~~~~~~~~~g~~~g~~ 89 (341)
T 3gve_A 11 HLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQN-PNTLLVDNGDLIQGNPLGEYAVKYQKDDIISGTKT 89 (341)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHC-SSEEEEECSCCSCSSHHHHHHHHHHHHHHHHTSSC
T ss_pred EEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcC-CCEEEEecCccCCCcHHHHHhhhcccccccccccc
Confidence 368999999999863 3444455554443 446788999998643210 0
Q ss_pred HHHHHHhcccCCCCccEEEEccCCCCh---HHHHHHHhccccccCcccCCceecccEEE------eCCCCeEEE-----c
Q 008383 51 DEFMNYVEGRSEIPIPTYFIGDYGVGA---AKVLLAASKNSANQGFKMDGFKVTDNLFW------LKGSGNFTL-----H 116 (567)
Q Consensus 51 ~~~~~~l~g~~~~p~ptyfv~GN~~~~---~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~------Lg~~gv~~~-----~ 116 (567)
....+.+ ..++.- +++.||||.. ..+...+.. ..-..++.|++. +....|++. +
T Consensus 90 ~~~~~~l---n~lg~D-a~tlGNHEfd~G~~~L~~~~~~--------~~fp~l~aNv~~~~g~~~~~py~I~~~~~~~~~ 157 (341)
T 3gve_A 90 HPIISVM---NALKYD-AGTLGNHEFNYGLDFLDGTIKG--------ADFPIVNANVKTTSGENRYTPYVINEKTLIDEN 157 (341)
T ss_dssp CHHHHHH---HHTTCC-BEECCGGGGTTCHHHHHHHHHT--------CSSCEECSSEECTTSCBSSCCEEEEEEEEECTT
T ss_pred cHHHHHH---HhhCCC-eeeccchhhccCHHHHHHHHHh--------cCCCEEEEeeECCCCCCccCCeEEEEEeeeccC
Confidence 0011222 233433 4677999954 223333331 123467888864 222234444 3
Q ss_pred ----CeEEEEEeccc
Q 008383 117 ----GLSVAYLSGRQ 127 (567)
Q Consensus 117 ----GlrIa~lgG~~ 127 (567)
|+|||.+|-..
T Consensus 158 G~~~gvkIgviG~t~ 172 (341)
T 3gve_A 158 GNEQKVKVGYIGFVP 172 (341)
T ss_dssp SCEEEEEEEEEEECC
T ss_pred CCcCCeEEEEEEecc
Confidence 69999998663
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.11 E-value=0.22 Score=54.28 Aligned_cols=113 Identities=15% Similarity=0.090 Sum_probs=66.5
Q ss_pred CCEEEEEcCCCCCHH--------------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChh----hHHHHHHHhc
Q 008383 3 PPRILLCGDVLGRLN--------------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----LLDEFMNYVE 58 (567)
Q Consensus 3 ~~KILv~GDvhG~~~--------------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~----~~~~~~~~l~ 58 (567)
++.||.+.|+||+|. ++...++++.+++ |--++|-.||++....- .-....+++
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~-~n~llldaGD~~qGs~~~~~~~g~~~i~~m- 80 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAE-PNVLLLDAGDQYQGTIWFTVYKGAEVAHFM- 80 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHC-SSEEEEECSCCSCSSHHHHHHTTHHHHHHH-
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhC-cCeEEEEeCCcccchHHHHHhCChHHHHHH-
Confidence 468999999998753 4555555555544 44677889999875321 000111222
Q ss_pred ccCCCCccEEEEccCCCChH---HHHHHHhccccccCcccCCceecccEEEeC-----------CCCeEEEcCeEEEEEe
Q 008383 59 GRSEIPIPTYFIGDYGVGAA---KVLLAASKNSANQGFKMDGFKVTDNLFWLK-----------GSGNFTLHGLSVAYLS 124 (567)
Q Consensus 59 g~~~~p~ptyfv~GN~~~~~---~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg-----------~~gv~~~~GlrIa~lg 124 (567)
..+++ -+.+.||||... .+++.+... ..-..|+.|++.-+ ..-|++.+|+|||.+|
T Consensus 81 --N~lgy-Da~~lGNHEFd~G~~~l~~~~~~~-------a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviG 150 (530)
T 4h1s_A 81 --NALRY-DAMALGNHEFDNGVEGLIEPLLKE-------AKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVG 150 (530)
T ss_dssp --HHTTC-CEEECCGGGGTTTTHHHHTTTTTT-------CSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEE
T ss_pred --hccCC-CEEEEchhhhccCHHHHHHHHHhh-------CCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeecc
Confidence 22222 367889998642 222322111 22457999997643 2345578999999998
Q ss_pred ccc
Q 008383 125 GRQ 127 (567)
Q Consensus 125 G~~ 127 (567)
-..
T Consensus 151 ltt 153 (530)
T 4h1s_A 151 YTS 153 (530)
T ss_dssp EEC
T ss_pred ccc
Confidence 663
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=93.36 E-value=0.13 Score=50.77 Aligned_cols=108 Identities=15% Similarity=0.043 Sum_probs=57.0
Q ss_pred CEEEEEcCCCCC--HHHHHHHHHHHHhhcCCCcEEEEecCCCCCC-hhhHHHHHHHhcccCCCCccEEEEccCCCChHH-
Q 008383 4 PRILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDS-SELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK- 79 (567)
Q Consensus 4 ~KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~-~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~- 79 (567)
||||++||+=|+ ...+...+.++.++. |++|+-|+-...+ .-.......+ ..+++-. ++.|||+-...
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~---d~vi~nge~~~~G~g~~~~~~~~l----~~~G~Da-~TlGNHefD~~~ 72 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF---DFVIVNMENSAGGFGMHRDAARGA----LEAGAGC-LTLGNHAWHHKD 72 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC---SEEEEECTBTTTTSSCCHHHHHHH----HHHTCSE-EECCTTTTSSTT
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC---CEEEECCCCccCCcCCCHHHHHHH----HhCCCCE-EEeccccccCch
Confidence 799999999886 445555566665543 9998888753211 1111222222 2333443 45589986533
Q ss_pred HHHHHhccccccCcccCCceecccEE---EeCC-CCeEEEcCeEEEEEecc
Q 008383 80 VLLAASKNSANQGFKMDGFKVTDNLF---WLKG-SGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 80 ~~~~l~~~~~~~~~~~~~~~i~~Nl~---~Lg~-~gv~~~~GlrIa~lgG~ 126 (567)
+++.+.... .-.-.+-|+- .-++ ..|++.+|+||+.+|-.
T Consensus 73 l~~~l~~~~-------~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~ 116 (255)
T 1t70_A 73 IYPMLSEDT-------YPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLL 116 (255)
T ss_dssp HHHHHHTTC-------SCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEE
T ss_pred HHHHHhhCC-------CcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEee
Confidence 333333110 0011123321 1122 34557789999988743
|
| >1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A | Back alignment and structure |
|---|
Probab=92.92 E-value=0.042 Score=43.79 Aligned_cols=56 Identities=30% Similarity=0.746 Sum_probs=21.6
Q ss_pred cceeeeccCCCCCCCcccccCCchhhhh------hccccchhhhccccCCCCCCcccccccC
Q 008383 315 MCFKFIYSGSCPRGEKCNFRHDTDAREQ------CLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (567)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (567)
+|..|...|.|+.|+.|+|.|+...-.. +-..+|..|.+.|.|..|.+|.+.|...
T Consensus 14 ~C~~f~~~G~C~~G~~C~f~H~~~e~~~~~~~~~~k~~~C~~f~~~G~C~~G~~C~f~H~~~ 75 (77)
T 1m9o_A 14 LCRTYSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFKLQGRCPYGSRCHFIHNPT 75 (77)
T ss_dssp CCSGGGGTSCCTTTTTCSSCSSSCCGGGTC--------------------------------
T ss_pred hCHHhhhCCCcCCCCCccCCCCChhhccccccccccCCcccchhhCcCCCCcCcCCCCCCCC
Confidence 6776767789999999999999753322 2356898899999999999999887654
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=92.75 E-value=0.23 Score=48.92 Aligned_cols=108 Identities=15% Similarity=0.122 Sum_probs=57.3
Q ss_pred CEEEEEcCCCCC--HHHHHHHHHHHHhhcCCCcEEEEecC-CCC-CChhhHHHHHHHhcccCCCCccEEEEccCCCChHH
Q 008383 4 PRILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQ-FFP-DSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK 79 (567)
Q Consensus 4 ~KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~vi~~GD-ff~-~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~ 79 (567)
||||++||+-|+ ...+.+.+.++.+++ |++|+=|. .+. .... ......+ .++++-+ ++.|||+-...
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~---d~vi~ngen~~~G~g~~-~~~~~~l----~~~G~D~-~T~GNHefD~~ 71 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY---DLVIANGENAARGKGLD-RRSYRLL----REAGVDL-VSLGNHAWDHK 71 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC---SEEEEECTTTTTTSSCC-HHHHHHH----HHHTCCE-EECCTTTTSCT
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC---CEEEEeCCCccCCCCcC-HHHHHHH----HhCCCCE-EEeccEeeECc
Confidence 799999999886 556666777776654 88777665 432 2111 1223333 3344554 47799986543
Q ss_pred -HHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecc
Q 008383 80 -VLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 80 -~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~ 126 (567)
++..+..... .......++ .....+.|++.+|.+|+.++-.
T Consensus 72 ~l~~~l~~~~~-----vrpaN~~~~-~pg~~~~i~~~~G~kIgVi~l~ 113 (252)
T 2z06_A 72 EVYALLESEPV-----VRPLNYPPG-TPGKGFWRLEVGGESLLFVQVM 113 (252)
T ss_dssp THHHHHHHSSE-----ECCTTSCSS-CSSCSEEEEEETTEEEEEEEEE
T ss_pred hHHHHhccCCc-----eEeecCCCC-CCCCCeEEEEECCEEEEEEEcc
Confidence 3333321000 000000011 0112245667899999988743
|
| >3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A* | Back alignment and structure |
|---|
Probab=92.19 E-value=0.45 Score=47.82 Aligned_cols=87 Identities=15% Similarity=0.107 Sum_probs=56.7
Q ss_pred CcceEEEECCE---EEEEec--C---CCCCCCeEEEEeccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCC---c-e
Q 008383 401 ESHLIVSVGEY---YYCALP--K---GPLVEDHVLVIPVEH-VPNTISTSPECEKELGRFQNSLMMYYKN-QGK---E-A 466 (567)
Q Consensus 401 ~~hliis~g~~---~yl~l~--k---gpl~~gH~LIiP~~H-~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~---~-~ 466 (567)
+...|++.+++ =|+++| | .|+..=|+|+||.+| +.|+.+|..+-..=+.+++....+...+ +|. . .
T Consensus 149 E~e~ilyeD~d~~~gFvllpDlkWd~~~~~~lhlLaI~~~~~I~SlrdL~~~HlpLL~~M~~~~~~~i~~~y~~~~~~~r 228 (301)
T 3bl9_A 149 EADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLR 228 (301)
T ss_dssp SGGGCCEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEE
T ss_pred ccccEEEecCCCCcCEEEeccCccCCCcccccEEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeE
Confidence 34456666555 266666 2 489999999999998 9999999877655555555555555443 232 2 3
Q ss_pred EEEEecCCCCCeeEEEEeecCc
Q 008383 467 VFFEWLSKRGTHANLQAVPIPT 488 (567)
Q Consensus 467 v~~E~~~~~~~H~hi~~vPvp~ 488 (567)
++|-+. -...|+|+|+|-+..
T Consensus 229 lgfHy~-PS~yHLHlHvis~~~ 249 (301)
T 3bl9_A 229 VYLHYL-PSYYHLHVHFTALGF 249 (301)
T ss_dssp EEEESS-CSSSSCEEEEEETTS
T ss_pred EEecCC-CCcceEEEEEEecCC
Confidence 344421 234799999998753
|
| >1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B* | Back alignment and structure |
|---|
Probab=91.20 E-value=0.5 Score=48.27 Aligned_cols=84 Identities=14% Similarity=0.086 Sum_probs=54.8
Q ss_pred eEEEECCE---EEEEec--C---CCCCCCeEEEEeccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCC---c-eEEE
Q 008383 404 LIVSVGEY---YYCALP--K---GPLVEDHVLVIPVEH-VPNTISTSPECEKELGRFQNSLMMYYKN-QGK---E-AVFF 469 (567)
Q Consensus 404 liis~g~~---~yl~l~--k---gpl~~gH~LIiP~~H-~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~---~-~v~~ 469 (567)
.|++.+++ =||++| | .|+..=|+|+||.+| +.|+.+|..+-..=|.+++....++... +|. . .++|
T Consensus 199 ~vlyeD~d~~~gFvllpDlKWd~~~~~~lhlLaI~~~~dI~SlRdL~~~HlpLL~~M~~~~~~ii~~~yg~~~~~lRlgf 278 (350)
T 1vlr_A 199 RIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKRYQVTGDRLRVYL 278 (350)
T ss_dssp CCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred cEEEecCCCCCCeEEeccCccCCCccccceEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeEEEe
Confidence 45555544 266666 2 489999999999998 9999999877655555555555555443 232 2 3444
Q ss_pred EecCCCCCeeEEEEeecCc
Q 008383 470 EWLSKRGTHANLQAVPIPT 488 (567)
Q Consensus 470 E~~~~~~~H~hi~~vPvp~ 488 (567)
=+. -...|+|+|+|-+..
T Consensus 279 Hy~-PS~yHLHlHvis~~~ 296 (350)
T 1vlr_A 279 HYL-PSYYHLHVHFTALGF 296 (350)
T ss_dssp ESS-CSSSSCEEEEEETTS
T ss_pred cCC-CCcceEEEEEEeccC
Confidence 422 234799999998753
|
| >3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A | Back alignment and structure |
|---|
Probab=86.40 E-value=0.37 Score=37.74 Aligned_cols=53 Identities=36% Similarity=0.921 Sum_probs=39.8
Q ss_pred cceeeeccCCCCCCC-cccccCCchh----hhhhccccchhhhccccCCCCCCcccccccC
Q 008383 315 MCFKFIYSGSCPRGE-KCNFRHDTDA----REQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (567)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (567)
+|..| ..|.|.+|+ .|+|.|.... .......+|.+|+. |.+.+| +|.+.|..+
T Consensus 8 vC~~f-~~G~C~rg~~~C~f~H~~~~~~~~~~~~~~~vC~~flk-G~C~r~-~C~y~H~~~ 65 (70)
T 3d2q_A 8 VCREY-QRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIK-GRCSRE-KCKYFHPPA 65 (70)
T ss_dssp BCHHH-HTTCCSSCTTTCSSBCCCTTSCCBTTTTEEEBCHHHHT-TCCCCT-TCCSBCCCH
T ss_pred hCHHH-hcCCCCCCCCCCCCccCcccccccccCCcceeccccCc-CCCCCC-CcCeeCCHH
Confidence 67777 669999999 5999998642 23344567988875 899988 888887643
|
| >1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A* | Back alignment and structure |
|---|
Probab=83.52 E-value=3.3 Score=42.47 Aligned_cols=62 Identities=13% Similarity=-0.052 Sum_probs=39.0
Q ss_pred eEEEEec-cccCCCCCCCHHHHHHHHHH-HHHHHHHHHhcCCceEEEEec---CC-CCCeeEEEEeecC
Q 008383 425 HVLVIPV-EHVPNTISTSPECEKELGRF-QNSLMMYYKNQGKEAVFFEWL---SK-RGTHANLQAVPIP 487 (567)
Q Consensus 425 H~LIiP~-~H~~s~~~~~~~~~~E~~~~-~~~L~~~~~~~g~~~v~~E~~---~~-~~~H~hi~~vPvp 487 (567)
|-+||=- .|..++.+++.+.+.++..+ ++.+.++. ..-.-|.+||+- ++ ...|-|.|++-.|
T Consensus 106 ~~VIi~sp~H~~~l~~l~~~~~~~vi~~~~~r~~~l~-~~~~yV~iF~N~G~~~G~Sl~HpH~Qi~a~~ 173 (348)
T 1gup_A 106 SRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELG-KTYPWVQVFENKGAAMGCSNPHPGGQIWANS 173 (348)
T ss_dssp EEEEESCSCTTCCGGGSCHHHHHHHHHHHHHHHHHHH-HHCSEEEEEEEESGGGTCSCCSSEEEEEEES
T ss_pred EEEEEcCCcccCChhhCCHHHHHHHHHHHHHHHHHHh-hcCCEEEEecccCCcCCcCCCCCceeEEecc
Confidence 4555544 99999999998877776654 45555555 322345677732 22 2478888887543
|
| >2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1 | Back alignment and structure |
|---|
Probab=83.24 E-value=0.86 Score=38.16 Aligned_cols=47 Identities=28% Similarity=0.730 Sum_probs=39.6
Q ss_pred cceeeeccCCCCCCCcccccCCchhhhhhccccchhhhccccCCCCCCcccccccC
Q 008383 315 MCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (567)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (567)
+|.-| ..|.|..|+.|+|.|+ ..+|..|.+.|.|..|.+|.+.|...
T Consensus 15 lC~~f-~~G~C~~G~~C~f~H~--------~~~C~~f~~~G~C~~G~~C~f~H~~~ 61 (98)
T 2cqe_A 15 LCKFY-ITGFCARAENCPYMHG--------DFPCKLYHTTGNCINGDDCMFSHDPL 61 (98)
T ss_dssp BCTTT-TTTCCSCSTTCSSBSS--------SSBCSHHHHTSCCSSCTTCSSBCCCC
T ss_pred cCccc-ccCcCCCCCCCCCCCC--------CCcCcCcccCCcCCCCCCCcccCCCC
Confidence 56555 3688999999999999 46788888899999999999998754
|
| >3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.08 E-value=0.73 Score=37.40 Aligned_cols=53 Identities=32% Similarity=0.795 Sum_probs=40.3
Q ss_pred cceeeeccCCCCCCC-cccccCCchhh--hhhccccchhhhccccCCCCCCcccccccC
Q 008383 315 MCFKFIYSGSCPRGE-KCNFRHDTDAR--EQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (567)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (567)
+|.+|.. |.|.+++ .|+|.|....- ....--+|.+|+ +|.|.++ .|++-|...
T Consensus 11 VCr~Flr-G~C~r~d~~C~f~H~~~~~~~~~~~~~vC~dfl-kG~C~r~-~C~y~H~~~ 66 (83)
T 3d2n_A 11 VCREFQR-GTCSRPDTECKFAHPSKSCQVENGRVIACFDSL-KGRCSRE-NCKYLHPPP 66 (83)
T ss_dssp BCTTGGG-TCCCSCTTTCSSBCCCTTCCEETTEEECCHHHH-TTCCCCS-SCSSCCCCH
T ss_pred hcHHHhc-CCCCCCCCCCCCcCCCccccccCCceeehhHhh-hccccCC-CcceeCChH
Confidence 7888887 9999997 99999997431 223346788984 6889888 888887654
|
| >2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.32 E-value=0.8 Score=37.67 Aligned_cols=53 Identities=32% Similarity=0.803 Sum_probs=40.6
Q ss_pred cceeeeccCCCCCCC-cccccCCchh--hhhhccccchhhhccccCCCCCCcccccccC
Q 008383 315 MCFKFIYSGSCPRGE-KCNFRHDTDA--REQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (567)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (567)
+|.+|.+ |.|.+++ .|+|.|.... -++..-.+|.+|+ +|+|.++ .|++-|...
T Consensus 19 VCrdFlr-G~C~r~d~~CrfsH~~~~~~v~~~~~~vC~dfl-kG~C~r~-~Cky~H~~~ 74 (89)
T 2rpp_A 19 VCRQFQR-GTCSRSDEECKFAHPPKSCQVENGRVIACFDSL-KGRCSRE-NCKYLHPPT 74 (89)
T ss_dssp BCHHHHH-TCCCCCTTTSSSBCCCSSSCCBTTBEEBCHHHH-HTCCCCT-TCCSBCCCH
T ss_pred hchHHhc-CCCCCCCCCCCCcCCCccccccCCceeeehhhh-hCcCCCC-CcceecCHH
Confidence 7888888 9999998 9999998653 1233456799986 7888887 787776644
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 567 | ||||
| d1guqa2 | 171 | d.13.1.2 (A:178-348) Galactose-1-phosphate uridyly | 2e-05 | |
| d1rgoa2 | 34 | g.66.1.1 (A:187-220) Butyrate response factor 2 (T | 6e-05 | |
| d1rgoa1 | 36 | g.66.1.1 (A:151-186) Butyrate response factor 2 (T | 7e-05 | |
| d1m9oa_ | 40 | g.66.1.1 (A:) Tristetraproline (ttp, tis11, nup475 | 1e-04 | |
| d1z84a2 | 156 | d.13.1.2 (A:196-351) Galactose-1-phosphate uridyly | 1e-04 | |
| d1xqua_ | 113 | d.13.1.1 (A:) Putative hydrolase {Clostridium ther | 0.004 |
| >d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: Hexose-1-phosphate uridylyltransferase domain: Galactose-1-phosphate uridylyltransferase species: Escherichia coli [TaxId: 562]
Score = 43.1 bits (101), Expect = 2e-05
Identities = 15/102 (14%), Positives = 30/102 (29%), Gaps = 8/102 (7%)
Query: 372 DDSQRTHRSENASANRSKECWFC--LSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVI 429
D Q+ + +E K + + V E++ +P L++
Sbjct: 6 DRLQKEYFAEQ------KSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLL 59
Query: 430 PVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEW 471
P HV + +L L Y N + + +
Sbjct: 60 PKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSM 101
|
| >d1rgoa2 g.66.1.1 (A:187-220) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]} Length = 34 | Back information, alignment and structure |
|---|
class: Small proteins fold: CCCH zinc finger superfamily: CCCH zinc finger family: CCCH zinc finger domain: Butyrate response factor 2 (Tis11D) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.1 bits (89), Expect = 6e-05
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRHDTD 338
++C F G CP G +C+F H+ D
Sbjct: 9 ELCRTFHTIGFCPYGPRCHFIHNAD 33
|
| >d1rgoa1 g.66.1.1 (A:151-186) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]} Length = 36 | Back information, alignment and structure |
|---|
class: Small proteins fold: CCCH zinc finger superfamily: CCCH zinc finger family: CCCH zinc finger domain: Butyrate response factor 2 (Tis11D) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.1 bits (89), Expect = 7e-05
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGV 347
++C F SG+C GEKC F H LR +
Sbjct: 7 ELCRPFEESGTCKYGEKCQFAHGFHE----LRSL 36
|
| >d1m9oa_ g.66.1.1 (A:) Tristetraproline (ttp, tis11, nup475) {Mouse (Mus musculus) [TaxId: 10090]} Length = 40 | Back information, alignment and structure |
|---|
class: Small proteins fold: CCCH zinc finger superfamily: CCCH zinc finger family: CCCH zinc finger domain: Tristetraproline (ttp, tis11, nup475) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 37.4 bits (87), Expect = 1e-04
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRHDTD 338
++C + SG C G KC F H
Sbjct: 10 ELCRTYSESGRCRYGAKCQFAHGLG 34
|
| >d1z84a2 d.13.1.2 (A:196-351) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: Hexose-1-phosphate uridylyltransferase domain: Galactose-1-phosphate uridylyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 40.1 bits (93), Expect = 1e-04
Identities = 12/99 (12%), Positives = 29/99 (29%), Gaps = 9/99 (9%)
Query: 373 DSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVE 432
D + + E +C C + H ++ ++ P + +IP +
Sbjct: 9 DGTKDYFEET------GKCCLC---EAKSKHFVIDESSHFVSVAPFAATYPFEIWIIPKD 59
Query: 433 HVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEW 471
H + +LG ++ Q + +
Sbjct: 60 HSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPYNYM 98
|
| >d1xqua_ d.13.1.1 (A:) Putative hydrolase {Clostridium thermocellum [TaxId: 1515]} Length = 113 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: Putative hydrolase species: Clostridium thermocellum [TaxId: 1515]
Score = 35.2 bits (80), Expect = 0.004
Identities = 20/96 (20%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Query: 390 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELG 449
C FC I E P HVL+IP EH+ N + + L
Sbjct: 3 NCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILI 62
Query: 450 RFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQAVP 485
+ ++ G + ++ G A Q V
Sbjct: 63 DIHKAANKVAEDLGIAEKGYRLITNCGVAAG-QTVF 97
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 567 | |||
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.75 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.7 | |
| d1y23a_ | 139 | Hit {Bacillus subtilis [TaxId: 1423]} | 99.63 | |
| d2oika1 | 139 | Histidine triad protein Mfla2506 {Methylobacillus | 99.59 | |
| d1kpfa_ | 111 | Protein kinase C inhibitor-1, PKCI-1 {Human (Homo | 99.58 | |
| d1xqua_ | 113 | Putative hydrolase {Clostridium thermocellum [TaxI | 99.57 | |
| d1emsa1 | 160 | NIT-FHIT fusion protein, C-terminal domain {Nemato | 99.51 | |
| d1fita_ | 146 | FHIT (fragile histidine triad protein) {Human (Hom | 99.38 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.36 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.25 | |
| d1z84a2 | 156 | Galactose-1-phosphate uridylyltransferase {Thale c | 99.21 | |
| d1guqa2 | 171 | Galactose-1-phosphate uridylyltransferase {Escheri | 99.2 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.2 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.08 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 98.91 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 98.85 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.82 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 98.78 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 98.29 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 98.12 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 98.01 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 97.95 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 97.79 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 97.64 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.16 | |
| d1vlra1 | 192 | mRNA decapping enzyme DcpS C-terminal domain {Mous | 96.88 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 96.56 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 96.54 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 96.09 | |
| d1z84a1 | 173 | Galactose-1-phosphate uridylyltransferase {Thale c | 96.05 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 95.69 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 95.63 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 95.3 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 92.27 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 91.48 | |
| d1guqa1 | 176 | Galactose-1-phosphate uridylyltransferase {Escheri | 90.26 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 86.66 |
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.75 E-value=1.6e-17 Score=158.07 Aligned_cols=198 Identities=17% Similarity=0.150 Sum_probs=134.0
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHH-
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVL- 81 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~- 81 (567)
+.+||++||+||++++|-+-++.+..+. .|+||++||++..... ..++..++....+..+|+|+|+||||.+....
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~~~--~D~vv~~GDl~~~~~~-~~~~~~~~~~L~~~~~pv~~i~GNHD~~~~~~~ 81 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPDTG--ADAIALIGNLMPKAAK-SRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYL 81 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHT--CSEEEEESCSSCTTCC-HHHHHHHHHHHGGGCSCEEEECCTTSCSHHHHH
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhhcC--CCEEEECCCCCCCCcc-chHHHHhhhhhccccceEEEEecCCCchhhhhh
Confidence 5799999999999997776666666543 7999999999864322 23445555545677899999999999753211
Q ss_pred -HHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCC----CCCCCHHHHHHHHHhh-cCCCCc
Q 008383 82 -LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQ----FGTYSQDDVDALRALA-EEPGIV 155 (567)
Q Consensus 82 -~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~----~~~~t~~dv~~L~~~~-~~~~~v 155 (567)
.... .......+..+.........++.+.++++........ .........+.+.... ......
T Consensus 82 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 150 (228)
T d1uf3a_ 82 REAAN-----------VELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYP 150 (228)
T ss_dssp HHHHH-----------HHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCSCC
T ss_pred hhhcc-----------cccccccccccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHHHHHHHHHhhccCCc
Confidence 1111 0112344445544333345678888888876544332 1223455555555433 334567
Q ss_pred cEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 156 DLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 156 DILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
+||++|.+|.+-.. ...|+..+.++++..+|+|++|||.|..++. ...|.+++.|.++.
T Consensus 151 ~il~~H~p~~~~~~-------------~~~~~~~~~~~~~~~~~~lvl~GH~H~~~~~--------~g~~~~v~pG~~~~ 209 (228)
T d1uf3a_ 151 KIFLFHTMPYHKGL-------------NEQGSHEVAHLIKTHNPLLVLVAGKGQKHEM--------LGASWVVVPGDLSE 209 (228)
T ss_dssp EEEEESSCBCBTTT-------------BTTSBHHHHHHHHHHCCSEEEECCSSCEEEE--------ETTEEEEECCBGGG
T ss_pred eEEEEeeeccCccc-------------cccccHHHHHHHHhcCCcEEEEcccccchhc--------cCCEEEEECCcccc
Confidence 99999999986421 2478999999999999999999998864332 34588999998864
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.70 E-value=3.5e-16 Score=150.90 Aligned_cols=204 Identities=13% Similarity=0.092 Sum_probs=131.1
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChh-------------------------hHHHHHHHhc
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-------------------------LLDEFMNYVE 58 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~-------------------------~~~~~~~~l~ 58 (567)
.|||+++|+|++++.+-+.++.++++ .+|+||++||++..... ..+.+..++.
T Consensus 3 ~ri~~isD~h~~~~~l~~l~~~~~~~--~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~~ 80 (257)
T d2yvta1 3 RKVLAIKNFKERFDLLPKLKGVIAEK--QPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFR 80 (257)
T ss_dssp CEEEEEECCTTCGGGHHHHHHHHHHH--CCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHhhc--CCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccccchhhHHHHHH
Confidence 59999999999998765555555554 37999999999874211 1122333444
Q ss_pred ccCCCCccEEEEccCCCChHHHH--HHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCC-CC
Q 008383 59 GRSEIPIPTYFIGDYGVGAAKVL--LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQ-FG 135 (567)
Q Consensus 59 g~~~~p~ptyfv~GN~~~~~~~~--~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~-~~ 135 (567)
.....++|+|+++||||...... ..+. .....+++..+....+...+++.|+++++........ ..
T Consensus 81 ~L~~~~~pv~~i~GNHD~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (257)
T d2yvta1 81 EIGELGVKTFVVPGKNDAPLKIFLRAAYE-----------AETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDF 149 (257)
T ss_dssp HHHTTCSEEEEECCTTSCCHHHHHHHHHH-----------TTTTCTTEEECSSEEEEETTTEEEEEECSEEESSCCBSSS
T ss_pred HHHhcCCcEEEEeCCCcchhhHHHHHhcc-----------ccccccccccccceeEEecCCeEEEEeccccCCccccchh
Confidence 44677899999999999654322 1111 1122356666665444345789999998875432211 11
Q ss_pred C--CCHHHHHHHHHh-hcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccc
Q 008383 136 T--YSQDDVDALRAL-AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYA 212 (567)
Q Consensus 136 ~--~t~~dv~~L~~~-~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyE 212 (567)
. +.+.....+... .......+|+++|.+|.+.... . .+.. ....|+..++++++..+|.|+++||.|..++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~Il~~H~pp~~~~~~-~---~~~~--~~~~g~~~l~~~l~~~~~~~~~~GHiH~~~~ 223 (257)
T d2yvta1 150 VLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFVD-R---TPED--PKHHGSAVVNTIIKSLNPEVAIVGHVGKGHE 223 (257)
T ss_dssp SCEEEHHHHHHHGGGGGGSCCCEEEEEESSCCSCSSTT-C---BTTB--SCCCSCHHHHHHHHHHCCSEEEECSSCCEEE
T ss_pred hhhhhhhHHHHHHHHhhhcccccEEEEEcccccccccc-c---cccc--hhhhhhHHHHHhhhhcCCcEEEEEeecCCeE
Confidence 1 122222223322 2334568899999999875321 1 1111 2468999999999999999999999886543
Q ss_pred cccccCCCCcceeEEEEccCCC
Q 008383 213 REPYSNVDAVHVTRFLGLAPVG 234 (567)
Q Consensus 213 r~Py~~~~~~~~TRFI~L~~~g 234 (567)
+ ...|.+++.|.+.
T Consensus 224 ~--------~g~~~~~~pGs~~ 237 (257)
T d2yvta1 224 L--------VGNTIVVNPGEFE 237 (257)
T ss_dssp E--------ETTEEEEECCBGG
T ss_pred e--------cCCeEEEECCccc
Confidence 2 3469999998764
|
| >d1y23a_ d.13.1.1 (A:) Hit {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: Hit species: Bacillus subtilis [TaxId: 1423]
Probab=99.63 E-value=7.6e-17 Score=144.70 Aligned_cols=99 Identities=18% Similarity=0.218 Sum_probs=78.8
Q ss_pred CCCccccCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHH----HHHhcC
Q 008383 389 KECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMM----YYKNQG 463 (567)
Q Consensus 389 ~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~----~~~~~g 463 (567)
++|.||.+. ...+ ..+|++++++++++++.|.++||+||||++|+.++.+++++++.+|....+.+.+ .+...|
T Consensus 1 e~CiFC~I~~~e~p-~~~i~ede~~~af~d~~P~~~GH~LViPk~H~~~~~dL~~~~~~~l~~~~~~~~~~l~~~~~~~g 79 (139)
T d1y23a_ 1 ENCIFCKIIAGDIP-SAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPIG 79 (139)
T ss_dssp CCCHHHHHHHTSSC-CCEEEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHCCSE
T ss_pred CcCccCccccCCCC-ccEEEECCCEEEEecCCCCCCcEEEEEEecccccccccchHHHHHHHHHHHHHHHHHhhhcccCC
Confidence 589999754 3344 4578999999999999999999999999999999999999999988876555544 444556
Q ss_pred CceEEEE--ecCCCCCeeEEEEeecCc
Q 008383 464 KEAVFFE--WLSKRGTHANLQAVPIPT 488 (567)
Q Consensus 464 ~~~v~~E--~~~~~~~H~hi~~vPvp~ 488 (567)
+.+++.. .+++...|+|+|+||+..
T Consensus 80 ~~i~~n~g~~agq~v~H~H~HviPR~~ 106 (139)
T d1y23a_ 80 LNTLNNNGEKAGQSVFHYHMHIIPRYG 106 (139)
T ss_dssp EEEEEEESGGGTCCSSSCCEEEEEECS
T ss_pred cEEEeCCCccccEecCEEEEEEEcccc
Confidence 6666654 234457899999999853
|
| >d2oika1 d.13.1.1 (A:6-144) Histidine triad protein Mfla2506 {Methylobacillus flagellatus [TaxId: 405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: Histidine triad protein Mfla2506 species: Methylobacillus flagellatus [TaxId: 405]
Probab=99.59 E-value=2.5e-15 Score=134.73 Aligned_cols=98 Identities=13% Similarity=0.113 Sum_probs=82.7
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCce
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEA 466 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~~~ 466 (567)
..+|.||... ...||++++.+++.+++.|.++||+||||++|+.++.+|+++++.++....+.+.+.+++ .+...
T Consensus 3 ~~~C~fC~~~----~~~ii~e~~~~~v~l~~~p~~pGh~Lvipk~H~~~l~dL~~~e~~~l~~~~~~~~~~l~~~~~~~~ 78 (139)
T d2oika1 3 HKNCELCTTA----GGEILWQDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMRPDK 78 (139)
T ss_dssp CTTCHHHHSC----CSEEEEECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSE
T ss_pred CCcCccccCc----CCeEEEECCCEEEEEcCCCCCCcEEEEecccccchhhhccHHHHHHHHHHHHHHhHHHHhhcchhh
Confidence 3589999754 346899999999999999999999999999999999999999999999998888877664 56666
Q ss_pred EEEEecCCCCCeeEEEEeecCcc
Q 008383 467 VFFEWLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 467 v~~E~~~~~~~H~hi~~vPvp~~ 489 (567)
+.+...++...|+|+|+||+..+
T Consensus 79 ~n~~~~g~~v~HlH~HviPR~~~ 101 (139)
T d2oika1 79 INLASLGNMTPHVHWHVIPRFKR 101 (139)
T ss_dssp EEEEECCSSSCSCEEEEEEECTT
T ss_pred hHHHHhcCCCCeEEEEEecccCC
Confidence 65654455679999999998654
|
| >d1kpfa_ d.13.1.1 (A:) Protein kinase C inhibitor-1, PKCI-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: Protein kinase C inhibitor-1, PKCI-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=4.6e-16 Score=134.33 Aligned_cols=96 Identities=18% Similarity=0.125 Sum_probs=77.2
Q ss_pred CCccccCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhc----CC
Q 008383 390 ECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ----GK 464 (567)
Q Consensus 390 ~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~----g~ 464 (567)
+|.||.+. .+.+ ..+|+++++++++++..|+++||+||||++|+.++.+++++.+.+|..+.+...++.++. |+
T Consensus 1 dCiFc~I~~~e~p-~~ivyede~~~af~D~~P~~~gH~LViPk~H~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 79 (111)
T d1kpfa_ 1 DTIFGKIIRKEIP-AKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGY 79 (111)
T ss_dssp CCHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCSCGGGCCGGGHHHHHHHHHHHHHHHHHTTCTTCE
T ss_pred CCcccccccCCCC-ccEEEeCCCEEEEecCCCCCCceEEEeecchhcchhhhhhHHHHHHHHHHHHHHHHHHHhCCCCCE
Confidence 69999754 3444 458999999999999999999999999999999999999999888888888777776653 34
Q ss_pred ceEEEE--ecCCCCCeeEEEEeec
Q 008383 465 EAVFFE--WLSKRGTHANLQAVPI 486 (567)
Q Consensus 465 ~~v~~E--~~~~~~~H~hi~~vPv 486 (567)
.++... .+.+...|+|+|+||+
T Consensus 80 ~i~~n~g~~agq~V~HlH~Hiip~ 103 (111)
T d1kpfa_ 80 RMVVNEGSDGGQSVYHVHLHVLGG 103 (111)
T ss_dssp EEECCCHHHHTCCSSSCCEEEEES
T ss_pred EEEEeCCccCCcccceeEEEEeCC
Confidence 433322 2344578999999996
|
| >d1xqua_ d.13.1.1 (A:) Putative hydrolase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: Putative hydrolase species: Clostridium thermocellum [TaxId: 1515]
Probab=99.57 E-value=5.6e-16 Score=134.16 Aligned_cols=100 Identities=17% Similarity=0.128 Sum_probs=79.9
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ----- 462 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~----- 462 (567)
.++|.||.+..+-....+|+++++++++++..|.++||+||||++|++++.+++++.++++....+.+.+++++.
T Consensus 1 m~~CiFC~I~~~e~p~~ivyede~~~af~d~~P~~~gH~LViPk~H~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (113)
T d1xqua_ 1 LENCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILIDIHKAANKVAEDLGIAEK 80 (113)
T ss_dssp CTTCHHHHHHTTSSCBCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHHHHHHHHHHTTCTTT
T ss_pred CCCCcCCcccCCCCcccEEEeCCCEEEEECCCCCCCceEEEeecccccchhhccchhHHHHHHHHHHHHHHHHhhccCCC
Confidence 368999985544344569999999999999999999999999999999999999988888988888888887754
Q ss_pred CCceEEEE--ecCCCCCeeEEEEeecC
Q 008383 463 GKEAVFFE--WLSKRGTHANLQAVPIP 487 (567)
Q Consensus 463 g~~~v~~E--~~~~~~~H~hi~~vPvp 487 (567)
|+.+++.. .+.+...|+|+|+||..
T Consensus 81 g~~~~~~~g~~agq~v~HlH~Hvip~~ 107 (113)
T d1xqua_ 81 GYRLITNCGVAAGQTVFHLHYHLLGGV 107 (113)
T ss_dssp CEEEECCCSTTTTCCSCSCCEEEEESS
T ss_pred ceEEEEeCccccccccCeeEEEEeCcc
Confidence 33433333 12334689999999963
|
| >d1emsa1 d.13.1.1 (A:281-440) NIT-FHIT fusion protein, C-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: NIT-FHIT fusion protein, C-terminal domain species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.51 E-value=1.1e-14 Score=133.52 Aligned_cols=100 Identities=13% Similarity=0.152 Sum_probs=78.0
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-c---C
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-Q---G 463 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~---g 463 (567)
.+.|.||. -.++..-||+.++++|++++..|+++||+||||++|++++.+++++++.+|....+.+.+++.+ . |
T Consensus 16 ~~~~~~~~--~eiP~~~ii~ede~~~af~Di~P~~pgH~LVIPK~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~g 93 (160)
T d1emsa1 16 TGGLKFAR--FNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTS 93 (160)
T ss_dssp SSCCEETT--EECCGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred cCCceEcC--CcCCcceEEEeCCCEEEEECCCCCCCCeEEEEEecccchhhhhhhHHHHHHHHHHHHhhhhhhhccccce
Confidence 44566664 2355656999999999999999999999999999999999999999999999998887777664 2 3
Q ss_pred CceEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 464 KEAVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 464 ~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
+.+++.. .+++...|+|+|+||+...
T Consensus 94 ~ni~~n~G~~aGq~V~HlHiHIIPR~~~ 121 (160)
T d1emsa1 94 TTICVQDGKDAGQTVPHVHIHILPRRAG 121 (160)
T ss_dssp EEEECCCSGGGTCCSSSCCEEEEEECSS
T ss_pred EEEecccCCCCCeEEeEEEEEEECCcCC
Confidence 3333322 2334468999999998653
|
| >d1fita_ d.13.1.1 (A:) FHIT (fragile histidine triad protein) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: FHIT (fragile histidine triad protein) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=3.7e-13 Score=121.42 Aligned_cols=88 Identities=15% Similarity=0.209 Sum_probs=71.7
Q ss_pred cceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----cCCceEEEE--ecCCC
Q 008383 402 SHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGKEAVFFE--WLSKR 475 (567)
Q Consensus 402 ~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~----~g~~~v~~E--~~~~~ 475 (567)
...||+.++.+++++++.|+++||+||||++|++++.+++++++.+|.+..+.+.+++.+ .|+++++.. .+++.
T Consensus 11 p~~ii~e~e~~~afld~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~~~g~~agq~ 90 (146)
T d1fita_ 11 PSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQT 90 (146)
T ss_dssp GGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSGGGTCC
T ss_pred cceEEEECCCEEEEECCCCCCCcEEEEEecceehHHHHhhHHHHHHHHHHHHHHHHHHHhhcccceEEEEEccccccCCC
Confidence 456999999999999999999999999999999999999999999999998877776654 233333322 12344
Q ss_pred CCeeEEEEeecCcc
Q 008383 476 GTHANLQAVPIPTS 489 (567)
Q Consensus 476 ~~H~hi~~vPvp~~ 489 (567)
..|+|+|+||+..+
T Consensus 91 v~HlH~HiiPR~~g 104 (146)
T d1fita_ 91 VKHVHVHVLPRKAG 104 (146)
T ss_dssp SSSCCEEEEEECTT
T ss_pred CCEEEEEEecCcCC
Confidence 68999999998664
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.36 E-value=4.8e-12 Score=115.79 Aligned_cols=150 Identities=11% Similarity=0.035 Sum_probs=98.0
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHH-H
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVL-L 82 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~-~ 82 (567)
|||++++|+||++..+-+-++.+.+. .+|.+||+||+.+. +.+..+ .....|++++.|||+...... .
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~--~~D~ii~~GD~~~~-----~~~~~l----~~~~~~~~~v~GN~D~~~~~~~~ 69 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDE--NVETVIHCGDFVSL-----FVIKEF----ENLNANIIATYGNNDGERCKLKE 69 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHS--CCSEEEECSCCCST-----HHHHHG----GGCSSEEEEECCTTCCCHHHHHH
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhc--CCCEEEECCCccCH-----HHHHHH----hhcCccEEEEcccccccchhhhH
Confidence 89999999999999888777766543 47999999999863 233333 445678999999998543211 1
Q ss_pred HHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCC
Q 008383 83 AASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNE 162 (567)
Q Consensus 83 ~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh~ 162 (567)
.+... .. .. .+.....+++ .+..|+++|.
T Consensus 70 ~~~~~--------~~----~~--~~~~~~~~~~-------------------------------------~~~~i~l~Hg 98 (165)
T d1s3la_ 70 WLKDI--------NE----EN--IIDDFISVEI-------------------------------------DDLKFFITHG 98 (165)
T ss_dssp HHHHH--------CT----TC--EEESEEEEEE-------------------------------------TTEEEEEEES
T ss_pred hhhhh--------cc----cc--cCChhhceEE-------------------------------------CCcEEEEEEC
Confidence 11100 00 00 1111111122 2357899998
Q ss_pred CCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCCcccceeE
Q 008383 163 WPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFI 242 (567)
Q Consensus 163 wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~~K~Kw~ 242 (567)
+|..+ +++++...++++.|+||.|..+.+ ....|.|||.|++|.+.+.+--
T Consensus 99 ~~~~~----------------------~~~~~~~~~~d~v~~GHtH~~~~~-------~~~~~~~iNPGSvg~p~~~~~s 149 (165)
T d1s3la_ 99 HHQSV----------------------LEMAIKSGLYDVVIYGHTHERVFE-------EVDDVLVINPGECCGYLTGIPT 149 (165)
T ss_dssp CCHHH----------------------HHHHHHHSCCSEEEEECSSCCEEE-------EETTEEEEECCCSSCTTTSCCE
T ss_pred CcccH----------------------HHHHhhcCCCCEEEECCcCcceEE-------EECCEEEEECCCCCCCCCCCCE
Confidence 87643 446677889999999998865433 2446999999999875443334
Q ss_pred EE
Q 008383 243 HA 244 (567)
Q Consensus 243 yA 244 (567)
||
T Consensus 150 ~~ 151 (165)
T d1s3la_ 150 IG 151 (165)
T ss_dssp EE
T ss_pred EE
Confidence 54
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.25 E-value=1.2e-10 Score=114.40 Aligned_cols=186 Identities=13% Similarity=0.082 Sum_probs=109.0
Q ss_pred CEEEEEcCCC---------CC--H-HHHHHHHHHHHhhcCCCcEEEEecCCCCCChh-hHHHHHHHhcccCCCCccEEEE
Q 008383 4 PRILLCGDVL---------GR--L-NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-LLDEFMNYVEGRSEIPIPTYFI 70 (567)
Q Consensus 4 ~KILv~GDvh---------G~--~-~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~-~~~~~~~~l~g~~~~p~ptyfv 70 (567)
|||+.++|+| |. . +.+-+.++.+++.....|+||++||+...... .-..+.+++ .++++|+|++
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~~~~y~~~~~~l---~~l~~p~~~i 77 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQIL---GSLNYPLYLI 77 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHH---TTCSSCEEEE
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCCcchhHHHHHHHH---hccCCCEEEE
Confidence 8999999999 21 1 22333445555443457999999999764322 223345555 6678999999
Q ss_pred ccCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHH-hh
Q 008383 71 GDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA-LA 149 (567)
Q Consensus 71 ~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~-~~ 149 (567)
+||||....+.+.+..... ..... ..+.. -.+...+.+|.+|....... ....+.++.++.|.+ +.
T Consensus 78 ~GNHD~~~~~~~~~~~~~~-----~~~~~-~~~~~-----~~~~~~~~~~i~ldt~~~~~--~~~~l~~~ql~wL~~~L~ 144 (271)
T d3d03a1 78 PGNHDDKALFLEYLQPLCP-----QLGSD-ANNMR-----CAVDDFATRLLFIDSSRAGT--SKGWLTDETISWLEAQLF 144 (271)
T ss_dssp CCTTSCHHHHHHHHGGGSG-----GGCSC-GGGCC-----EEECSSSSEEEECCCCCTTC--SSBCCCHHHHHHHHHHHH
T ss_pred ecCccchHHHHHHhhhhhh-----ccccc-cCcce-----EEEecCCeEEEecccccCCC--CcceecHHHHHHHHHHHh
Confidence 9999987655555432110 00000 01110 11123467887775543211 124567787777764 33
Q ss_pred cCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccc
Q 008383 150 EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYA 212 (567)
Q Consensus 150 ~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~fyE 212 (567)
+.....-|+++|.+|..+...... + ........+.+++++. ..++.||||.|..+.
T Consensus 145 ~~~~~~~iv~~Hh~p~~~~~~~~d---~----~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~ 201 (271)
T d3d03a1 145 EGGDKPATIFMHHPPLPLGNAQMD---P----IACENGHRLLALVERFPSLTRIFCGHNHSLTM 201 (271)
T ss_dssp HHTTSCEEEEESSCSSCCSCTTTG---G----GSBTTTHHHHHHHHHCTTEEEEEECSSSSCEE
T ss_pred hhccceeEEEeccCccccCccccc---c----ccccchHHHHHHHHhcCCeEEEEeCCcchhhc
Confidence 323445678899999766432111 0 0124566788888876 588999999886544
|
| >d1z84a2 d.13.1.2 (A:196-351) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: Hexose-1-phosphate uridylyltransferase domain: Galactose-1-phosphate uridylyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.21 E-value=1.5e-11 Score=111.75 Aligned_cols=99 Identities=15% Similarity=0.220 Sum_probs=77.4
Q ss_pred CCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceE
Q 008383 389 KECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAV 467 (567)
Q Consensus 389 ~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~~~v 467 (567)
..|.||... .+.+||+.++++++++|..|..|||+||||++|++++.+++++++.+|....+.+.+++.+ .+....
T Consensus 19 ~~Cifc~i~---~~~riV~e~~~~~a~~p~~p~~p~h~lIiPk~h~~~~~~l~~~e~~~l~~~~~~v~~~l~~~~~~~~~ 95 (156)
T d1z84a2 19 GKCCLCEAK---SKHFVIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPY 95 (156)
T ss_dssp SSCTTTTHH---HHSEEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTSCCE
T ss_pred CCCceEEec---CCCEEEEECCCEEEEEccCCCcCcEEEEEecchhhhhccCCHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 479999643 3457999999999999999999999999999999999999999999999998888877765 333222
Q ss_pred EEE-e-c--CCC-----CCeeEEEEeecCcch
Q 008383 468 FFE-W-L--SKR-----GTHANLQAVPIPTSK 490 (567)
Q Consensus 468 ~~E-~-~--~~~-----~~H~hi~~vPvp~~~ 490 (567)
.+- + . +.. ..|+|+|++|+-+.+
T Consensus 96 n~~~~~~p~~~~~~~~~~~H~hi~~~Pr~~~~ 127 (156)
T d1z84a2 96 NYMIHTSPLKVTESQLPYTHWFLQIVPQLSGV 127 (156)
T ss_dssp EEEEECCCTTCCGGGGGGCCCEEEEEECCCCC
T ss_pred cHhhhcCCCCCcccCceeEEEEEEecCCCCcc
Confidence 221 1 1 111 259999999975544
|
| >d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: Hexose-1-phosphate uridylyltransferase domain: Galactose-1-phosphate uridylyltransferase species: Escherichia coli [TaxId: 562]
Probab=99.20 E-value=6.1e-12 Score=116.04 Aligned_cols=98 Identities=13% Similarity=0.065 Sum_probs=75.3
Q ss_pred CCCccccCC-CC-CCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cC--
Q 008383 389 KECWFCLSS-PS-VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QG-- 463 (567)
Q Consensus 389 ~~C~FC~~~-~~-~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g-- 463 (567)
..|.||-.- .. -.+..||+.++++.+++|..|..|||+||||++|+.++.+++++++++|....+.+.+++.+ .+
T Consensus 17 ~~clfcdii~~E~~~~~RiV~e~e~~~af~~~~p~~p~h~lIiPk~h~~~~~~l~~~e~~~L~~~~~~v~~~l~~~~~~~ 96 (171)
T d1guqa2 17 KSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCS 96 (171)
T ss_dssp SSCHHHHHHHHHHHHCTTEEEECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCCcHHHHHHhhccCCCeEEEECCeEEEEEcCCCCCcceEEEecchhcCChhhCCHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 479999642 22 23567999999999999999999999999999999999999999999999888777766654 22
Q ss_pred --CceEEEEe-cCC---CCCeeEEEEeec
Q 008383 464 --KEAVFFEW-LSK---RGTHANLQAVPI 486 (567)
Q Consensus 464 --~~~v~~E~-~~~---~~~H~hi~~vPv 486 (567)
+...+... .+. ...|+|+|++|+
T Consensus 97 ~~y~~~~~~~p~~~~~~~~~H~Hihi~Pr 125 (171)
T d1guqa2 97 FPYSMGWHGAPFNGEENQHWQLHAHFYPP 125 (171)
T ss_dssp CCEEEEEECCCSSSSCCTTCCCEEEEECC
T ss_pred cchhhhhhcCccccCCCceeEEEEEEccC
Confidence 23333331 111 136999999995
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.20 E-value=1.2e-10 Score=113.06 Aligned_cols=184 Identities=13% Similarity=0.071 Sum_probs=111.3
Q ss_pred CCEEEEEcCCCC----C--------HHHHHHHHHHHHhhcCCCcEEEEecCCCCCChh-hHHHHHHHhccc-CCCCccEE
Q 008383 3 PPRILLCGDVLG----R--------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-LLDEFMNYVEGR-SEIPIPTY 68 (567)
Q Consensus 3 ~~KILv~GDvhG----~--------~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~-~~~~~~~~l~g~-~~~p~pty 68 (567)
.|||+.++|+|= + .+.+.+.++.+++...+.|+||++||++..... .-+.+.+++... ..+++|+|
T Consensus 4 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~~~~~~~~~~~l~~~~~~~~~p~~ 83 (256)
T d2hy1a1 4 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELV 83 (256)
T ss_dssp SEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCCHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCChhHHHHHHHHhhhhhhhcCCCEE
Confidence 489999999992 1 223333445555544468999999999865322 112333433221 34578999
Q ss_pred EEccCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHh
Q 008383 69 FIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRAL 148 (567)
Q Consensus 69 fv~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~ 148 (567)
++.||||....+...+... . .+.. .....+.++|.+|.++.-... ......++++.++.|.+.
T Consensus 84 ~v~GNHD~~~~~~~~~~~~---------~----~~~~--~~~~~~~~~~~~~~~ldt~~~--~~~~g~~~~~~~~wl~~~ 146 (256)
T d2hy1a1 84 WVMGNHDDRAELRKFLLDE---------A----PSMA--PLDRVCMIDGLRIIVLDTSVP--GHHHGEIRASQLGWLAEE 146 (256)
T ss_dssp ECCCTTSCHHHHHHHTTCC---------C----CCCS--CCCEEEEETTEEEEECCCBCT--TCSSBCCCHHHHHHHHHH
T ss_pred EEcccccchhhhhhhhccc---------c----cccc--ccceEEEecccceeeeeeeec--CCcCCcccHHHHHHHHHH
Confidence 9999999765544443311 0 0000 011234578888887743321 111245677878877764
Q ss_pred h-cCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCc
Q 008383 149 A-EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVF 210 (567)
Q Consensus 149 ~-~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f 210 (567)
. ......-|+++|.+|......... . .....+..+.+++++.+..+.||||.|..
T Consensus 147 L~~~~~~~~iv~~Hhpp~~~~~~~~~-----~--~~~~~~~~~~~i~~~~~v~~~~~GH~H~~ 202 (256)
T d2hy1a1 147 LATPAPDGTILALHHPPIPSVLDMAV-----T--VELRDQAALGRVLRGTDVRAILAGHLHYS 202 (256)
T ss_dssp HTSCCTTCEEEECSSCSSCCSSHHHH-----T--TSBCCHHHHHHHHTTSSEEEEEECSSSSC
T ss_pred HHhhhccCceeeeecCCccccccccc-----c--cccccHHHHHHHHhccCceEEEccccchh
Confidence 3 233345589999999876321110 0 12345778999999999999999998854
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.08 E-value=2.3e-10 Score=105.50 Aligned_cols=133 Identities=14% Similarity=-0.003 Sum_probs=90.5
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHH
Q 008383 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKV 80 (567)
Q Consensus 1 M~~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~ 80 (567)
|+++||+|++|+||++..|-+.++.+. +.+|+||++||+..... .....++++|.||++...
T Consensus 1 m~~~kI~viSD~Hgn~~al~~vl~~~~---~~~D~iih~GD~~~~~~-------------~~~~~~~~~V~GN~D~~~-- 62 (173)
T d3ck2a1 1 MAKQTIIVMSDSHGDSLIVEEVRDRYV---GKVDAVFHNGDSELRPD-------------SPLWEGIRVVKGNMDFYA-- 62 (173)
T ss_dssp CCCEEEEEECCCTTCHHHHHHHHHHHT---TTSSEEEECSCCCSCTT-------------CGGGTTEEECCCTTCCST--
T ss_pred CCCCEEEEEeccCCCHHHHHHHHHHhh---cCCCEEEECCcccCccc-------------chhhcCCeEEecCccccc--
Confidence 999999999999999987766555432 24899999999866421 112246899999997321
Q ss_pred HHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEe
Q 008383 81 LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLT 160 (567)
Q Consensus 81 ~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLT 160 (567)
.+.. ..+++++|++| +++
T Consensus 63 ------------------~~~~-------~~~~~~~~~~~-------------------------------------~~~ 80 (173)
T d3ck2a1 63 ------------------GYPE-------RLVTELGSTKI-------------------------------------IQT 80 (173)
T ss_dssp ------------------TCCS-------EEEEEETTEEE-------------------------------------EEE
T ss_pred ------------------ccce-------EEEEEECCEEE-------------------------------------EEE
Confidence 0011 12334555554 455
Q ss_pred CCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCCc
Q 008383 161 NEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNK 236 (567)
Q Consensus 161 h~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~ 236 (567)
|-+|.++ ..+...+.+++....+.+.|+||.|..+-+ ....+.+||.|++|.+
T Consensus 81 Hg~~~~~----------------~~~~~~l~~~~~~~~~dvvi~GHTH~p~~~-------~~~~~~~iNPGSvg~p 133 (173)
T d3ck2a1 81 HGHLFDI----------------NFNFQKLDYWAQEEEAAICLYGHLHVPSAW-------LEGKILFLNPGSISQP 133 (173)
T ss_dssp CSGGGTT----------------TTCSHHHHHHHHHTTCSEEECCSSCCEEEE-------EETTEEEEEECCSSSC
T ss_pred eCcCCCC----------------CCCHHHHHHHHHhcCCCEEEeCCcCcceEE-------EECCEEEEECCCCCCC
Confidence 5554433 123456788888899999999999865433 2346999999999864
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.91 E-value=7.4e-10 Score=102.94 Aligned_cols=136 Identities=13% Similarity=0.113 Sum_probs=86.4
Q ss_pred CEEEEEcCCCCCHHH--HHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHH
Q 008383 4 PRILLCGDVLGRLNQ--LFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVL 81 (567)
Q Consensus 4 ~KILv~GDvhG~~~~--l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~ 81 (567)
|||||++|+||+.+. |-+++.++-+ .+++|.+||+||+.+. +..+++ .++..++++|.||||...
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~-~~~~D~Ii~~GDi~~~------e~l~~l---~~~~~~v~~V~GN~D~~~--- 67 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLV-PGKIQHILCTGNLCTK------ESYDYL---KTLAGDVHIVRGDFDENL--- 67 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCC-TTSCSEEEECSCCBSH------HHHHHH---HHHCSEEEECCCTTCCCT---
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhc-ccCCCEEEEccCccch------hhHHHH---HhhCCceEEEeCCcCccc---
Confidence 899999999987543 2234444332 3469999999999751 223333 333457899999997321
Q ss_pred HHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeC
Q 008383 82 LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTN 161 (567)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh 161 (567)
. +.. ..++++.|.+ |++||
T Consensus 68 --------------~---~p~-------~~~~~~~g~~-------------------------------------i~~~H 86 (182)
T d1z2wa1 68 --------------N---YPE-------QKVVTVGQFK-------------------------------------IGLIH 86 (182)
T ss_dssp --------------T---SCS-------EEEEEETTEE-------------------------------------EEEEC
T ss_pred --------------c---cce-------EEEEEEcCcE-------------------------------------EEEEe
Confidence 0 001 1233444444 45566
Q ss_pred CCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCCc
Q 008383 162 EWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNK 236 (567)
Q Consensus 162 ~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~ 236 (567)
..+... ......+.++++..++.+.|+||.|..+-. ....|.|||.|+++-+
T Consensus 87 g~~~~~----------------~~~~~~l~~~~~~~~~divi~GHTH~p~~~-------~~~~~~~iNPGSv~~p 138 (182)
T d1z2wa1 87 GHQVIP----------------WGDMASLALLQRQFDVDILISGHTHKFEAF-------EHENKFYINPGSATGA 138 (182)
T ss_dssp SCCCCB----------------TTCHHHHHHHHHHHSSSEEECCSSCCCEEE-------EETTEEEEECCCTTCC
T ss_pred CCCCCC----------------CCCHHHHHHHHhccCCCEEEECCcCcceEE-------EECCEEEEeCCCCCCC
Confidence 543321 123456788889999999999999864332 2346999999999753
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=98.85 E-value=5.7e-09 Score=97.57 Aligned_cols=144 Identities=12% Similarity=0.100 Sum_probs=84.7
Q ss_pred EEEEEcCCCCCHHH--HHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHH
Q 008383 5 RILLCGDVLGRLNQ--LFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLL 82 (567)
Q Consensus 5 KILv~GDvhG~~~~--l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~ 82 (567)
=|||+||+|++... +.+++.++.+ .+++|.|||+||+.+. + ..+++ .++..++++|.||||... ..
T Consensus 5 lIlviSD~H~~~~~~~l~~~~~~~~~-~~~vD~ii~~GDi~~~--~----~l~~l---~~l~~~v~~V~GN~D~~~--~~ 72 (193)
T d2a22a1 5 LVLLIGDLKIPYGAKELPSNFRELLA-TDKINYVLCTGNVCSQ--E----YVEML---KNITKNVYIVSGDLDSAI--FN 72 (193)
T ss_dssp EEEEECCCCTTTTCSSCCGGGHHHHH-CTTCCEEEECSCCCCH--H----HHHHH---HHHCSCEEECCCTTCCSC--CB
T ss_pred EEEEEeCCCCCcccchhhHHHHHHhc-cCCCCEEEECCCCCCH--H----HHHHH---HhhCCCEEEEcCCCCcch--hh
Confidence 48999999985332 2223333333 3469999999999762 2 22333 223346899999998421 00
Q ss_pred HHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCC
Q 008383 83 AASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNE 162 (567)
Q Consensus 83 ~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh~ 162 (567)
......-.|....+++++|++| +++|.
T Consensus 73 ----------------~~~~~~~~lp~~~~~~~~~~~i-------------------------------------~l~H~ 99 (193)
T d2a22a1 73 ----------------PDPESNGVFPEYVVVQIGEFKI-------------------------------------GLMHG 99 (193)
T ss_dssp ----------------CCGGGTBCCCSEEEEEETTEEE-------------------------------------EEECS
T ss_pred ----------------hhHHHHhhCCccEEEEECCEEE-------------------------------------EEEec
Confidence 0001111122222334555555 44443
Q ss_pred CCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCCc
Q 008383 163 WPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNK 236 (567)
Q Consensus 163 wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~ 236 (567)
.+... ......+.+++...++++.|+||.|..+-+ ....|.+||.|+++.+
T Consensus 100 ~~~~~----------------~~~~~~l~~~~~~~~~dvvi~GHTH~~~~~-------~~~g~~~iNPGSvg~p 150 (193)
T d2a22a1 100 NQVLP----------------WDDPGSLEQWQRRLDCDILVTGHTHKLRVF-------EKNGKLFLNPGTATGA 150 (193)
T ss_dssp TTSSS----------------TTCHHHHHHHHHHHTCSEEEECSSCCCEEE-------EETTEEEEECCCSSCC
T ss_pred cCCCC----------------CCCHHHHHHHHhhcCCCEEEEcCccCceEE-------EECCEEEEECCCCCcC
Confidence 32211 112346888899999999999999864332 2456999999999753
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.82 E-value=5.2e-08 Score=89.15 Aligned_cols=70 Identities=9% Similarity=0.123 Sum_probs=49.9
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh-------hhHHHHHHHhcccCCCCccEEEEccCCC
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-------ELLDEFMNYVEGRSEIPIPTYFIGDYGV 75 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~-------~~~~~~~~~l~g~~~~p~ptyfv~GN~~ 75 (567)
.|||+++||+||++..+-+-++.+.+. ..|.+||+||++.... ....++.+.+ .....+++++.||||
T Consensus 1 mMki~iiSDiHg~~~al~~vl~~~~~~--~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~GNhD 75 (184)
T d1su1a_ 1 MMKLMFASDIHGSLPATERVLELFAQS--GAQWLVILGDVLNHGPRNALPEGYAPAKVVERL---NEVAHKVIAVRGNCD 75 (184)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHH--TCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHH---HTTGGGEEECCCTTC
T ss_pred CcEEEEEeecCCCHHHHHHHHHHHhhc--CCCEEEEcCcccccCccchhhhccCcHHHHHHH---HhcCCcEEEecCCCC
Confidence 489999999999998876666655544 4799999999976321 1122233332 556778999999998
Q ss_pred Ch
Q 008383 76 GA 77 (567)
Q Consensus 76 ~~ 77 (567)
..
T Consensus 76 ~~ 77 (184)
T d1su1a_ 76 SE 77 (184)
T ss_dssp CH
T ss_pred ch
Confidence 53
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.78 E-value=1.8e-09 Score=102.98 Aligned_cols=189 Identities=11% Similarity=0.074 Sum_probs=98.7
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHh---hcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHH
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNK---SAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKV 80 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~---k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~ 80 (567)
++|+|+||+||++.+|-+.++.+.. ...++|.+|++||++.-... ..+..+++....+ ..++++|.||||. .+
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~~-~~evi~~l~~l~~-~~~v~~v~GNHD~--~~ 76 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPY-PKEVIEVIKDLTK-KENVKIIRGKYDQ--II 76 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSC-HHHHHHHHHHHHH-HSCEEEECCHHHH--HH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCCC-cHHHHHHHHHHhh-cCCEEEEeccHHH--HH
Confidence 4899999999998776665555543 34578999999999764332 2234444322111 2368999999973 22
Q ss_pred HHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhh----cCCCCcc
Q 008383 81 LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALA----EEPGIVD 156 (567)
Q Consensus 81 ~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~----~~~~~vD 156 (567)
+..... ...........+ .+... .. ... +...++++.++.+..+. ....+.+
T Consensus 77 ~~~~~~---------~~~~~~~~~~~~--~~~~~-~~-------~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 132 (251)
T d1nnwa_ 77 AMSDPH---------ATDPGYIDKLEL--PGHVK-KA-------LKF-----TWEKLGHEGREYLRDLPIYLVDKIGGNE 132 (251)
T ss_dssp HHSCTT---------CSSSGGGGGSSC--CHHHH-HH-------HHH-----HHHHHHHHHHHHHHTSCSCEEEEETTEE
T ss_pred Hhcccc---------ccccchhhhhcc--chhHH-Hh-------hHH-----HhhhcCHHHHHHHHhcccceEEeeCCCc
Confidence 221110 000000000000 00000 00 000 00011122233333321 1124568
Q ss_pred EEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 157 LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 157 ILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
|+++|.+|......... ....+.......... .-++.|+||.|.-+.+ ....+++||.|++|-
T Consensus 133 ~~~~H~~p~~~~~~~~~---------~~~~~~~~~~~~~~~~~~d~vv~GHtH~~~~~-------~~~~~~~in~Gsvg~ 196 (251)
T d1nnwa_ 133 VFGVYGSPINPFDGEVL---------AEQPTSYYEAIMRPVKDYEMLIVASPMYPVDA-------MTRYGRVVCPGSVGF 196 (251)
T ss_dssp EEEESSCSSCTTTCCCC---------SSCCHHHHHHHHGGGTTSSEEEESTTCSEEEE-------EETTEEEEEECCSSS
T ss_pred EEEEecCccCcccchhh---------hhhHHHHHhhhcccccCceEEEEeccceEEEE-------Eeeeeeccccccccc
Confidence 99999999865432211 123344444444433 4679999998865443 244689999999985
Q ss_pred c
Q 008383 236 K 236 (567)
Q Consensus 236 ~ 236 (567)
+
T Consensus 197 ~ 197 (251)
T d1nnwa_ 197 P 197 (251)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=98.29 E-value=3.3e-06 Score=81.14 Aligned_cols=72 Identities=10% Similarity=-0.028 Sum_probs=47.3
Q ss_pred CEEEEEcCCCC-------------------CHHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh----hhHHHHHHHhccc
Q 008383 4 PRILLCGDVLG-------------------RLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS----ELLDEFMNYVEGR 60 (567)
Q Consensus 4 ~KILv~GDvhG-------------------~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~----~~~~~~~~~l~g~ 60 (567)
.||++++|+|= .+..+-+.++.+++. .+|+||++||++.... .....+..++.-.
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~--~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRE--RVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL 81 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHT--TCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhC--CCCEEEECCCCCCCCCcchhHHHHHHHHHHHHH
Confidence 58999999992 134444445555543 4799999999975421 1122333433333
Q ss_pred CCCCccEEEEccCCCCh
Q 008383 61 SEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 61 ~~~p~ptyfv~GN~~~~ 77 (567)
..+++|+++++|||+..
T Consensus 82 ~~~~~p~~~v~GNHD~~ 98 (320)
T d2nxfa1 82 DACSVDVHHVWGNHEFY 98 (320)
T ss_dssp HTTCSEEEECCCHHHHH
T ss_pred HHcCCCEEEecccCccc
Confidence 56789999999999843
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=98.12 E-value=3e-05 Score=76.93 Aligned_cols=204 Identities=15% Similarity=0.122 Sum_probs=106.7
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCC------ChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPD------SSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~------~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
+.|++|+||.+..... ...+..+.......|+||++||+.-. ....-+++.+.++. ....+|.++++||||.
T Consensus 7 p~~F~v~GD~g~~~~~-~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~-~~~~~P~~~~~GNHD~ 84 (312)
T d2qfra2 7 PYTFGLIGDLGQSFDS-NTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTER-SVAYQPWIWTAGNHEI 84 (312)
T ss_dssp CEEEEEECSCCSBHHH-HHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHH-HHTTSCEEECCCGGGT
T ss_pred CEEEEEEeeCCCCCch-HHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHH-HhhcceEEEecccccc
Confidence 5789999998765543 33444443333457999999998521 11111234444332 1234799999999983
Q ss_pred hH-----------HHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHH
Q 008383 77 AA-----------KVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDAL 145 (567)
Q Consensus 77 ~~-----------~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L 145 (567)
.. .+....... ..+..-..+.+| .+..+++.+..|.-.... ... .++.+-|
T Consensus 85 ~~~~~~~~~~~~~~~~~~f~~P-------~~~~~~~~~~~Y-----sf~~g~v~fi~Lds~~~~-----~~~-~~Q~~WL 146 (312)
T d2qfra2 85 EFAPEINETEPFKPFSYRYHVP-------YEASQSTSPFWY-----SIKRASAHIIVLSSYSAY-----GRG-TPQYTWL 146 (312)
T ss_dssp CCBGGGTBCSTTHHHHHHCCCC-------GGGGTCSSTTSE-----EEEETTEEEEECCTTSCC-----STT-SHHHHHH
T ss_pred cccccccccccccchhhhccCC-------ccccCCCCCceE-----EEEECCEEEEEeeccccc-----cch-HHHHHHH
Confidence 10 011111000 000000011111 235678888877543211 111 2345555
Q ss_pred HH-hhcC-CCCc--cEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcccc-ccccCCC
Q 008383 146 RA-LAEE-PGIV--DLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAR-EPYSNVD 220 (567)
Q Consensus 146 ~~-~~~~-~~~v--DILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr-~Py~~~~ 220 (567)
++ |++. .... =|++.|.|+..-...... ........+..|+.+.+-...|+||.|. ||| .|..+..
T Consensus 147 ~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~--------~~~~~r~~l~~l~~~~~Vdlv~~GH~H~-YeRt~p~~~~~ 217 (312)
T d2qfra2 147 KKELRKVKRSETPWLIVLMHSPLYNSYNHHFM--------EGEAMRTKFEAWFVKYKVDVVFAGHVHA-YERSERVSNIA 217 (312)
T ss_dssp HHHHHTCCTTTCCEEEEECSSCSSCCBSTTTT--------TTHHHHHHHHHHHHHTTCSEEEECSSSS-EEEECSEECCC
T ss_pred HHHHHHHhhcCCCEEEEEccccccccCCCCcc--------cchhHHHHHHHHHHHcCcEEEEEccCcc-eEEEeeccCCc
Confidence 54 3221 2233 378899998764321110 0011234677888899999999999885 465 3432210
Q ss_pred ------------CcceeEEEEccCCCC
Q 008383 221 ------------AVHVTRFLGLAPVGN 235 (567)
Q Consensus 221 ------------~~~~TRFI~L~~~g~ 235 (567)
....|..|-.|.-|+
T Consensus 218 ~~~~~~~~~~~~~~~g~vyiv~G~gG~ 244 (312)
T d2qfra2 218 YKITNGLCTPVKDQSAPVYITIGDAGN 244 (312)
T ss_dssp CCSSSCCCSCEECTTSCEEEEECCSCT
T ss_pred ccccCCccccccCCCcCEEEEECcCCC
Confidence 123566776677665
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.01 E-value=5e-06 Score=80.49 Aligned_cols=193 Identities=11% Similarity=-0.006 Sum_probs=91.4
Q ss_pred CCEEEEEcCCCCC---------HHHHHHHHHHHHhhcCCCcEEEEecCCCCC---ChhhHHHHHHHh----cccCCCCcc
Q 008383 3 PPRILLCGDVLGR---------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPD---SSELLDEFMNYV----EGRSEIPIP 66 (567)
Q Consensus 3 ~~KILv~GDvhG~---------~~~l~~kv~~l~~k~GpfD~vi~~GDff~~---~~~~~~~~~~~l----~g~~~~p~p 66 (567)
.+|++|+||+|+. .....+.+.++.++. +.|+||.+||+.-. .......+.+.+ .......+|
T Consensus 4 ~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~P 82 (302)
T d1utea_ 4 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTL-GADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVP 82 (302)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHH-CCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCC
T ss_pred CeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhC-CCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcCCc
Confidence 5799999999863 112233344443333 57999999998621 111122333322 222346789
Q ss_pred EEEEccCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeE-EEcCeEEEEEecc------cCC--CCCC---C
Q 008383 67 TYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF-TLHGLSVAYLSGR------QSS--EGQQ---F 134 (567)
Q Consensus 67 tyfv~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~-~~~GlrIa~lgG~------~~~--~~~~---~ 134 (567)
+|++.||||............. .......+.-+|.-..+.. ....+.+..+.-. ... .... .
T Consensus 83 ~~~~~GNHD~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~~~~~~ 156 (302)
T d1utea_ 83 WHVLAGNHDHLGNVSAQIAYSK------ISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRN 156 (302)
T ss_dssp EEECCCHHHHHSCHHHHHHGGG------TSTTEECCSSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSC
T ss_pred eEEeecccccccccccccchhh------ccccccCCCcccceeecccCCCCcEEEEEccceeEeeccccccccccccccc
Confidence 9999999973211111110000 0000111111110000000 0012333322211 000 0000 0
Q ss_pred CCCCHHHHHHHHH-hhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcccc
Q 008383 135 GTYSQDDVDALRA-LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAR 213 (567)
Q Consensus 135 ~~~t~~dv~~L~~-~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr 213 (567)
..+.+++++.|+. +++....-=|+++|.+|......... ..-...+.+|+++.+..+.|+||.|.| ||
T Consensus 157 ~~~~~~Q~~WL~~~L~~~~~~~~iv~~h~~~~~~~~~~~~----------~~~~~~~~~ll~~~~v~~~~~GH~H~~-~r 225 (302)
T d1utea_ 157 LALARTQLAWIKKQLAAAKEDYVLVAGHYPVWSIAEHGPT----------HCLVKQLLPLLTTHKVTAYLCGHDHNL-QY 225 (302)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSEEEEECSSCSSCCSSSCCC----------HHHHHHTHHHHHHTTCSEEEECSSSSE-EE
T ss_pred chhHHHHHHHHHHHHHhhccCceEEEEeccccccCCCCCc----------hhhhhhhhHHHHhcCceEEEeCCCcce-EE
Confidence 1123455555554 33333344478888887755322110 112346888889999999999998854 54
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.95 E-value=5.3e-06 Score=81.27 Aligned_cols=73 Identities=19% Similarity=0.284 Sum_probs=47.2
Q ss_pred CEEEEEcCCC-CC-----------HHHHHHHHHHHHhhcCCCcEEEEecCCCCCC---hhhHHHHHHHhcccCCCCccEE
Q 008383 4 PRILLCGDVL-GR-----------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDS---SELLDEFMNYVEGRSEIPIPTY 68 (567)
Q Consensus 4 ~KILv~GDvh-G~-----------~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~---~~~~~~~~~~l~g~~~~p~pty 68 (567)
||||.++|+| |. +...++++-....+. ..|+||++||+|... ......+..++......++|+|
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~-~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v~ 79 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQE-NVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVF 79 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHT-TCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEE
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHc-CCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcEE
Confidence 8999999999 21 122333332222233 479999999998642 2223334444444456789999
Q ss_pred EEccCCCCh
Q 008383 69 FIGDYGVGA 77 (567)
Q Consensus 69 fv~GN~~~~ 77 (567)
+++||||..
T Consensus 80 ~i~GNHD~~ 88 (333)
T d1ii7a_ 80 AIEGNHDRT 88 (333)
T ss_dssp EECCTTTCC
T ss_pred EeCCCCccc
Confidence 999999864
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=97.79 E-value=8.2e-06 Score=76.27 Aligned_cols=71 Identities=14% Similarity=0.196 Sum_probs=52.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHHH
Q 008383 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAA 84 (567)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~l 84 (567)
||+|+||+||+++.|.+.+++++... +-|.+|++||++.-.++.. +..+++.. .-+.+|-||||. .++..+
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~-~~d~lv~lGD~vDrGp~s~-~vl~~l~~-----~~~~~i~GNHE~--~ll~~~ 84 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDN-KKDLLISVGDLVDRGAENV-ECLELITF-----PWFRAVRGNHEQ--MMIDGL 84 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCT-TTCEEEECSCCSSSSSCHH-HHHGGGGS-----TTEEECCCHHHH--HHHHHH
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCC-CCCEEEEeCCccccCccHH-HHHHHhhc-----cccccccCcHHH--HHHHHH
Confidence 79999999999999988888876433 3599999999987655433 45566532 347899999973 344433
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=97.64 E-value=0.00013 Score=67.03 Aligned_cols=156 Identities=10% Similarity=-0.018 Sum_probs=87.1
Q ss_pred EEEEEcCCCCCHHH------------HH-HHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEc
Q 008383 5 RILLCGDVLGRLNQ------------LF-KRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIG 71 (567)
Q Consensus 5 KILv~GDvhG~~~~------------l~-~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~ 71 (567)
+|.+++|.|=.... .- .-++.+++.-++-|.|+++|||.-.... .+++.+++ .+++...++|.
T Consensus 3 mi~fiSD~Hfgh~~i~~~r~f~~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~-~~~~~~~l---~~L~g~~~lI~ 78 (188)
T d1xm7a_ 3 MMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFND-KNEYLRIW---KALPGRKILVM 78 (188)
T ss_dssp CEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCC-TTSHHHHH---HHSSSEEEEEC
T ss_pred eEEEEeCcCCCCcchhhcCCCCCHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCC-HHHHHHHH---HHCCCceEEEe
Confidence 58899999921111 11 1356677766788999999998532111 12344554 44566789999
Q ss_pred cCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcC
Q 008383 72 DYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEE 151 (567)
Q Consensus 72 GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~ 151 (567)
||||.....+. . ....+.+.. .++.+
T Consensus 79 GNHD~~~~~~~--~----------~~~~~~~~~------~~~~~------------------------------------ 104 (188)
T d1xm7a_ 79 GNHDKDKESLK--E----------YFDEIYDFY------KIIEH------------------------------------ 104 (188)
T ss_dssp CTTCCCHHHHT--T----------TCSEEESSE------EEEEE------------------------------------
T ss_pred cCCCchhhhhh--h----------chhhHHHHH------HHhhh------------------------------------
Confidence 99985422111 0 000111110 01111
Q ss_pred CCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcc
Q 008383 152 PGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLA 231 (567)
Q Consensus 152 ~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~ 231 (567)
.+-.|+|||.|+..-... . .......+.++..+.+..++++||.|.......... .....|+++.|
T Consensus 105 -~g~~i~l~H~P~~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~lhGH~H~~~~~~~~~~--~~~~~~~~nV~ 170 (188)
T d1xm7a_ 105 -KGKRILLSHYPAKDPITE-R----------YPDRQEMVREIYFKENCDLLIHGHVHWNREGIKCAC--KDYRIECINAN 170 (188)
T ss_dssp -TTEEEEEESSCSSCSSCC-S----------CHHHHHHHHHHHHHTTCSEEEECCCCCCSCC--CCT--TSSSCCEEECB
T ss_pred -CCeEEEEEeCCCcccccc-c----------cccchhHHHHHHHhcCceEEEEeeccCCcccccccc--ccCCCCEEEee
Confidence 234689999998643211 0 112345677888899999999999875543322222 23346677766
Q ss_pred C
Q 008383 232 P 232 (567)
Q Consensus 232 ~ 232 (567)
-
T Consensus 171 v 171 (188)
T d1xm7a_ 171 V 171 (188)
T ss_dssp G
T ss_pred e
Confidence 4
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.16 E-value=0.0019 Score=64.15 Aligned_cols=114 Identities=14% Similarity=0.025 Sum_probs=61.1
Q ss_pred CCEEEEEcCCCCCHH----------HHHHHHHHHHh---hcCCCcEEEEecCCCCCChhh----HHHHHHHhcccCCCCc
Q 008383 3 PPRILLCGDVLGRLN----------QLFKRVQSVNK---SAGPFDAVLCVGQFFPDSSEL----LDEFMNYVEGRSEIPI 65 (567)
Q Consensus 3 ~~KILv~GDvhG~~~----------~l~~kv~~l~~---k~GpfD~vi~~GDff~~~~~~----~~~~~~~l~g~~~~p~ 65 (567)
+..||.++|+||+|. .+...++++.+ ..++--++|-+||+|...... -...-+.+ ..+++
T Consensus 8 ~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s~~~~g~~~~~~m---n~~g~ 84 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGM---NLVGY 84 (337)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHHHTTTTHHHHHHH---HHHTC
T ss_pred EEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHHHHHhCChHHHHHH---HhcCC
Confidence 357999999998763 33333444332 244434555599998642110 01111121 23333
Q ss_pred cEEEEccCCCChH--HHHHHHhccccccCcccCCceecccEEEeC-------CCCeEEEcCeEEEEEeccc
Q 008383 66 PTYFIGDYGVGAA--KVLLAASKNSANQGFKMDGFKVTDNLFWLK-------GSGNFTLHGLSVAYLSGRQ 127 (567)
Q Consensus 66 ptyfv~GN~~~~~--~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg-------~~gv~~~~GlrIa~lgG~~ 127 (567)
- ..+.||||... +.+..+-.. .....++.|++.-. ..-|++.+|+|||.+|-..
T Consensus 85 D-a~~~GNHEfd~G~~~l~~~~~~-------~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~ 147 (337)
T d1usha2 85 D-AMAIGNHEFDNPLTVLRQQEKW-------AKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTT 147 (337)
T ss_dssp C-EEECCGGGGSSCHHHHHHHHHH-------CSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEEC
T ss_pred e-EEEechhhhccchHHHHHHHHh-------cCceEeeccccccccccccccceeeeecCCeEEEeecccc
Confidence 3 45679998642 223222111 12346777775432 2234567899999998764
|
| >d1vlra1 d.13.1.3 (A:146-337) mRNA decapping enzyme DcpS C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: mRNA decapping enzyme DcpS C-terminal domain domain: mRNA decapping enzyme DcpS C-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.88 E-value=0.0011 Score=60.35 Aligned_cols=97 Identities=12% Similarity=0.062 Sum_probs=60.8
Q ss_pred ccccCCCCCCcceEEEECCE---EEEEec--C---CCCCCCeEEEEeccc-cCCCCCCCHHHHHHHHHHHHHHHHHHH-h
Q 008383 392 WFCLSSPSVESHLIVSVGEY---YYCALP--K---GPLVEDHVLVIPVEH-VPNTISTSPECEKELGRFQNSLMMYYK-N 461 (567)
Q Consensus 392 ~FC~~~~~~~~hliis~g~~---~yl~l~--k---gpl~~gH~LIiP~~H-~~s~~~~~~~~~~E~~~~~~~L~~~~~-~ 461 (567)
.+...+.+.|...|++.+.+ -|+.+| | .|+.+-|+|+||.+| +.|+.+|.++-..=|.+++...++... .
T Consensus 30 v~nIL~~~~E~e~i~y~D~d~~~gFvllpD~kWd~~~~~~lhlL~I~~r~~I~SlrDL~~ehlpLL~~m~~~~~~~i~~~ 109 (192)
T d1vlra1 30 VYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKR 109 (192)
T ss_dssp HHHHHTC----CCCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCccceeEEeCCCCCCCEEEecccccCCCcccCeEEEEEEccCCCCChHHCCHhHHHHHHHHHHHHHHHHHHH
Confidence 34443445566777777644 266665 3 489999999999988 999999977655555555544444332 2
Q ss_pred cCC---c-eEEEEecCCCCCeeEEEEeecCcc
Q 008383 462 QGK---E-AVFFEWLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 462 ~g~---~-~v~~E~~~~~~~H~hi~~vPvp~~ 489 (567)
+|. . -++|- ......|+|+||+-++.+
T Consensus 110 ~gi~~~~~Rig~H-~~PSv~HLHlHvi~~~~~ 140 (192)
T d1vlra1 110 YQVTGDRLRVYLH-YLPSYYHLHVHFTALGFE 140 (192)
T ss_dssp HCCCGGGEEEEEE-SSCSSSSCEEEEEETTSC
T ss_pred hCCChhheEEEEE-CCCCEeeeEEEEEeccCC
Confidence 232 1 24454 334468999999988654
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=96.56 E-value=0.013 Score=56.93 Aligned_cols=112 Identities=12% Similarity=-0.043 Sum_probs=66.5
Q ss_pred CEEEEEcCCCCCHH-----------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChhh----HHHHHHHhcccCC
Q 008383 4 PRILLCGDVLGRLN-----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL----LDEFMNYVEGRSE 62 (567)
Q Consensus 4 ~KILv~GDvhG~~~-----------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~----~~~~~~~l~g~~~ 62 (567)
+.||.++|+||++. .+...++++.+++ |--++|-+||+|...... -....+.+ ..
T Consensus 3 l~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~-~~~l~ldaGD~~~Gs~~~~~~~g~~~~~~~---n~ 78 (302)
T d2z1aa2 3 LTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARA-KNPLFLDAGDVFQGTLYFNQYRGLADRYFM---HR 78 (302)
T ss_dssp EEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHS-SSEEEEECSCCSSSSHHHHHHTTHHHHHHH---HH
T ss_pred EEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhC-CCeEEEEcCCCCCCCHhHhhhcchhHHHHH---Hh
Confidence 57999999999763 4555555554443 557899999998753210 00111121 22
Q ss_pred CCccEEEEccCCCCh--HHHHHHHhccccccCcccCCceecccEEEeCC---------CCeEEEcCeEEEEEeccc
Q 008383 63 IPIPTYFIGDYGVGA--AKVLLAASKNSANQGFKMDGFKVTDNLFWLKG---------SGNFTLHGLSVAYLSGRQ 127 (567)
Q Consensus 63 ~p~ptyfv~GN~~~~--~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~---------~gv~~~~GlrIa~lgG~~ 127 (567)
++. -..+.||||.. ...+..+... .....++.|+.+-+. .-+++.+|+||+.+|-.-
T Consensus 79 ~gy-Da~~~GNHEfd~G~~~l~~~~~~-------~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t 146 (302)
T d2z1aa2 79 LRY-RAMALGNHEFDLGPGPLADFLKG-------ARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTT 146 (302)
T ss_dssp TTC-CEEECCGGGGTTCHHHHHHHHTT-------CCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEEC
T ss_pred ccc-ccccccchhhhcChhHHHHHhhh-------cccceeEeeeeccccccccCccceeEEEEECCeEEEEEeccc
Confidence 322 36788999864 2233332211 234578999876432 123457899999998763
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=96.54 E-value=0.017 Score=56.60 Aligned_cols=117 Identities=9% Similarity=-0.087 Sum_probs=59.1
Q ss_pred CCEEEEEcCCCCCHH----------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChhh-----H-HHHHHHhccc
Q 008383 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL-----L-DEFMNYVEGR 60 (567)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~-----~-~~~~~~l~g~ 60 (567)
+++||.+.|+||.+. .+.+.+++..++.++--++|-+||+|....-. . ....+.+
T Consensus 11 ~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~m--- 87 (322)
T d3c9fa2 11 DINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIF--- 87 (322)
T ss_dssp SEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHH---
T ss_pred EEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCChHHHHHH---
Confidence 578999999999653 33444444433444433555699998532100 0 0111222
Q ss_pred CCCCccEEEEccCCCChH--HHHHHHhccccccCcccCCceecccEEEeCCC----------CeEEEc--CeEEEEEecc
Q 008383 61 SEIPIPTYFIGDYGVGAA--KVLLAASKNSANQGFKMDGFKVTDNLFWLKGS----------GNFTLH--GLSVAYLSGR 126 (567)
Q Consensus 61 ~~~p~ptyfv~GN~~~~~--~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~----------gv~~~~--GlrIa~lgG~ 126 (567)
..++.- +++.||||... ..+..+..... ......|+.|+.+.... .+++.. +++|++++-.
T Consensus 88 n~lgyD-a~t~GNHEfd~g~~~l~~~~~~~~----~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~~~~~~~i~i~g~~~~ 162 (322)
T d3c9fa2 88 IKQDYD-LLTIGNHELYLWENSKQEYETVVN----HFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFL 162 (322)
T ss_dssp TTSCCS-EECCCGGGSSSHHHHHHHHHHHHH----HTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECC
T ss_pred hccCCc-EEeecceecccchHHHHHHHHHHH----hcCCCEEeeeEEecCCCCcccccCCceEEEEECCCcEEEEEEeec
Confidence 333333 66779999632 12222110000 01234688888765432 234444 5666666544
Q ss_pred c
Q 008383 127 Q 127 (567)
Q Consensus 127 ~ 127 (567)
.
T Consensus 163 ~ 163 (322)
T d3c9fa2 163 F 163 (322)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.09 E-value=0.0046 Score=60.94 Aligned_cols=70 Identities=17% Similarity=0.278 Sum_probs=49.6
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcC-CC--cEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAG-PF--DAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~G-pf--D~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
..|.||||+||++..|+.-++ +.| |. .-.|.+||...-++...+.+.-++.-....|--+|.+-||||..
T Consensus 60 ~pv~VvGDiHGq~~DL~~if~----~~g~p~~~~~ylFLGDYVDRG~~slEvi~lL~~lKi~yP~~v~LLRGNHE~~ 132 (324)
T d1s95a_ 60 EKITVCGDTHGQFYDLLNIFE----LNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETD 132 (324)
T ss_dssp CEEEEECCCTTCHHHHHHHHH----HHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCEEEEEECCCCHHHHHHHHH----HCCCCCCCCeEEEecccccCcCcceeehHHHHHHHHhCCCcEEeccCCcccc
Confidence 378999999999999885443 233 32 24788999987666555554444433345677899999999975
|
| >d1z84a1 d.13.1.2 (A:23-195) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: Hexose-1-phosphate uridylyltransferase domain: Galactose-1-phosphate uridylyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.05 E-value=0.022 Score=50.89 Aligned_cols=100 Identities=13% Similarity=0.160 Sum_probs=61.5
Q ss_pred CCCCccccCCCCCCcceEEEECC-----EEEEEecCCCCC---------------------CC-e-EEEEeccccCCCCC
Q 008383 388 SKECWFCLSSPSVESHLIVSVGE-----YYYCALPKGPLV---------------------ED-H-VLVIPVEHVPNTIS 439 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~-----~~yl~l~kgpl~---------------------~g-H-~LIiP~~H~~s~~~ 439 (567)
...|.||-.|......-+..+.+ .+.++-++.|.. .| | ++|---.|..++.+
T Consensus 38 ~~~CPfCpGne~~~~~~~~~~~~~~~~w~vrv~~N~fPal~~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ 117 (173)
T d1z84a1 38 PSSCPFCIGREQECAPELFRVPDHDPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVHSIQLSD 117 (173)
T ss_dssp -CCCTTSTTCGGGSSCEEEEESTTCSSCSEEEEECSSCSSBGGGTTTC--------CEEECBCEEEEEECCSSSSCCGGG
T ss_pred cccCCCCCCCcccCCCcceeccccCCCceEEEeCCCCcccccccccccccCcCcceeecccccceeeEEeCccccCChhh
Confidence 46899998764322222333322 355665677732 13 3 44447799999999
Q ss_pred CCHHHHHHHHH-HHHHHHHHHHhcCC-ceEEEEec----CCCCCeeEEEEeecC
Q 008383 440 TSPECEKELGR-FQNSLMMYYKNQGK-EAVFFEWL----SKRGTHANLQAVPIP 487 (567)
Q Consensus 440 ~~~~~~~E~~~-~~~~L~~~~~~~g~-~~v~~E~~----~~~~~H~hi~~vPvp 487 (567)
++.+.+..+.+ +++.++.+.+..+. -|.+||+. +-...|-|.|++-.|
T Consensus 118 ~~~e~i~~v~~~~~~r~~~l~~~~~i~yV~iF~N~G~~aGaSl~HPH~QI~a~p 171 (173)
T d1z84a1 118 IDPVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALP 171 (173)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEEES
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCceEEEEEeecCccCccCCCCCCeeeeeec
Confidence 99887777765 46666666444443 36678832 222479999998765
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.69 E-value=0.006 Score=59.19 Aligned_cols=71 Identities=15% Similarity=0.229 Sum_probs=50.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.|.|+||+||++..|+.-++.... .+-.-.|.+||+..-++...+.+.-++.-....|--+|.+-||||..
T Consensus 46 pv~VvGDlHG~~~DL~~if~~~g~--p~~~~ylFLGDYVDRG~~slEvl~lL~alKi~~P~~v~lLRGNHE~~ 116 (288)
T d3c5wc1 46 PVTVCGDVHGQFHDLMELFRIGGK--SPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESR 116 (288)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHCC--TTTSCEEECSCCCCSSSSHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred CeEEEeeCCCCHHHHHHHHHhcCC--CccceEEecCcccCCCCcceeHHHHHHHHHhhCCCeEEEeccCCccc
Confidence 589999999999999866654321 13345788999987655545544444433456788899999999976
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=95.63 E-value=0.0061 Score=59.26 Aligned_cols=72 Identities=15% Similarity=0.289 Sum_probs=49.9
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
..|.|+||+||++..|+.-++.... -|-.-.|.+||...-++...+-+.-++.=....|--+|.+-||||.+
T Consensus 52 ~pv~VvGDiHG~~~DL~~if~~~g~--p~~~~ylFLGDYVDRG~~slE~i~lL~aLKi~~P~~v~lLRGNHE~~ 123 (294)
T d1jk7a_ 52 APLKICGDIHGQYYDLLRLFEYGGF--PPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 123 (294)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCC--TTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CCeEEEEECCCChHhHHHHHhhcCC--CccceEEeeccccCCCccchHHHHHHHHHHhhCCCeEEEecCCcccc
Confidence 3589999999999999864443211 13455788999977655545544433333456788899999999975
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.30 E-value=0.0088 Score=61.48 Aligned_cols=71 Identities=13% Similarity=0.212 Sum_probs=48.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
-|.||||+||++..|+.-++..... +-.-.|.+||+..-++...+-+.-++.-....|--+|.+-||||..
T Consensus 71 Pv~VvGDIHGq~~DLl~If~~~G~P--~~~~yLFLGDYVDRG~~SlEvlllL~aLKi~yP~~V~LLRGNHE~~ 141 (473)
T d1auia_ 71 PVTVCGDIHGQFFDLMKLFEVGGSP--ANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 141 (473)
T ss_dssp SEEEECCCTTCHHHHHHHHHHHCCT--TTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCCC--CcceEEecCccccCCcccHHHHHHHHHHHHhCCCeEEEeCCCCccH
Confidence 4899999999999988554432211 2345678899977655545444434333456788899999999964
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=92.27 E-value=0.068 Score=50.83 Aligned_cols=76 Identities=16% Similarity=0.123 Sum_probs=52.8
Q ss_pred CC-CCEEEEEcCCCCC--HHHHHHHHHHHHhhcCCCcEEEEecCC----CCCChhhHHHHHHHhcccCCCCccEEEEccC
Q 008383 1 MS-PPRILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQF----FPDSSELLDEFMNYVEGRSEIPIPTYFIGDY 73 (567)
Q Consensus 1 M~-~~KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~vi~~GDf----f~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN 73 (567)
|. .||||++||+-|+ .+.+.+.+..|.++.+ .|+||+=|.- ++...+.-++|.++ | +- +++.||
T Consensus 1 m~~~MkILfiGDIvG~~GR~~v~~~Lp~Lr~~~~-iDfVIaNgENaa~G~Git~k~~~eL~~~--G-----vD-vIT~GN 71 (281)
T d1t71a_ 1 MMNSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQ-ADLVIVNAENTTHGKGLSLKHYEFLKEA--G-----VN-YITMGN 71 (281)
T ss_dssp CCCCCEEEEECEEBHHHHHHHHHTTHHHHHHHHT-CSEEEEECTBTTTTSSCCHHHHHHHHHH--T-----CC-EEECCT
T ss_pred CCccceEEEEEccCCHHHHHHHHHHhHHHHHHhC-CCEEEECCccCCCCcCCCHHHHHHHHHh--C-----Cc-EEEcCc
Confidence 66 7999999999997 5667777888888875 7999999985 33343333333332 2 22 578999
Q ss_pred CC-ChHHHHHHHh
Q 008383 74 GV-GAAKVLLAAS 85 (567)
Q Consensus 74 ~~-~~~~~~~~l~ 85 (567)
|- +..++++.+.
T Consensus 72 H~wd~kei~~~i~ 84 (281)
T d1t71a_ 72 HTWFQKLDLAVVI 84 (281)
T ss_dssp TTTCCGGGHHHHT
T ss_pred hhhhchhhHHHHh
Confidence 96 4456676664
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=91.48 E-value=0.44 Score=44.45 Aligned_cols=102 Identities=18% Similarity=0.180 Sum_probs=59.8
Q ss_pred CEEEEEcCCCCC--HHHHHHHHHHHHhhcCCCcEEEEecCC----CCCChhhHHHHHHHhcccCCCCccEEEEccCCCC-
Q 008383 4 PRILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQF----FPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG- 76 (567)
Q Consensus 4 ~KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~vi~~GDf----f~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~- 76 (567)
||||++||+-|+ .+.+-+.+..|.++ +|+||+=|.- ++...+.-++|.++ | .. .++.|||--
T Consensus 1 MkILfiGDIvG~~Gr~~v~~~Lp~lk~~---~DfVIaNgENaa~G~Git~~~~~~l~~~--G-vD-----viT~GNH~wd 69 (255)
T d1t70a_ 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQ---FDFVIVNMENSAGGFGMHRDAARGALEA--G-AG-----CLTLGNHAWH 69 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGG---CSEEEEECTBTTTTSSCCHHHHHHHHHH--T-CS-----EEECCTTTTS
T ss_pred CeEEEEecCCCHHHHHHHHHHhHHHHhh---CCEEEECCccCCCCcCCCHHHHHHHHHc--C-Cc-----EEEcCchhhc
Confidence 899999999997 55666777777543 7999999985 44443333333333 2 22 578899943
Q ss_pred hHHHHHHHhccccccCcccCCceecc-cEE--EeCCCCeE--EEcCeEEEEEe
Q 008383 77 AAKVLLAASKNSANQGFKMDGFKVTD-NLF--WLKGSGNF--TLHGLSVAYLS 124 (567)
Q Consensus 77 ~~~~~~~l~~~~~~~~~~~~~~~i~~-Nl~--~Lg~~gv~--~~~GlrIa~lg 124 (567)
..++++.+..+ ...-+.| |.. ...+.|.. +.+|.+|+.+.
T Consensus 70 kkei~~~i~~~--------~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViN 114 (255)
T d1t70a_ 70 HKDIYPMLSED--------TYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVN 114 (255)
T ss_dssp STTHHHHHHTT--------CSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEE
T ss_pred chhHHHHHhhc--------chhhhhhhccCCCCCCCceEEEEeeccCcEEEEE
Confidence 34466655421 0112333 221 12334543 45788888765
|
| >d1guqa1 d.13.1.2 (A:2-177) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: Hexose-1-phosphate uridylyltransferase domain: Galactose-1-phosphate uridylyltransferase species: Escherichia coli [TaxId: 562]
Probab=90.26 E-value=0.67 Score=40.78 Aligned_cols=62 Identities=15% Similarity=0.025 Sum_probs=39.5
Q ss_pred eEEEE-eccccCCCCCCCHHHHHHHHH-HHHHHHHHHHhcCCceEEEEecC----CCCCeeEEEEeecC
Q 008383 425 HVLVI-PVEHVPNTISTSPECEKELGR-FQNSLMMYYKNQGKEAVFFEWLS----KRGTHANLQAVPIP 487 (567)
Q Consensus 425 H~LIi-P~~H~~s~~~~~~~~~~E~~~-~~~~L~~~~~~~g~~~v~~E~~~----~~~~H~hi~~vPvp 487 (567)
|-+|| --.|..++.+++.+.+..+.. +++.+.++-+...+ +.+||+.+ -...|-|.|++-.|
T Consensus 105 heVIi~sp~H~~~l~~~~~~~i~~vl~a~~~R~~~l~~~i~y-v~iFkN~G~~aGaSl~HPH~QI~a~p 172 (176)
T d1guqa1 105 SRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPW-VQVFENKGAAMGCSNPHPGGQIWANS 172 (176)
T ss_dssp EEEEESCSCTTCCGGGSCHHHHHHHHHHHHHHHHHHHHHCSE-EEEEEEESGGGTCSCCSSEEEEEEES
T ss_pred eeEEEECcccccChhhCCHHHHHHHHHHHHHHHHHhcCCCCE-EEEEeecCccccCCCCCCCeeeeecC
Confidence 55555 889999999999887776654 45555544333344 45577322 22468888887654
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=86.66 E-value=0.7 Score=42.90 Aligned_cols=70 Identities=16% Similarity=0.151 Sum_probs=44.4
Q ss_pred CEEEEEcCCCCC--HHHHHHHHHHHHhhcCCCcEEEEecCC----CCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 4 PRILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQF----FPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 4 ~KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~vi~~GDf----f~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
||||++||+-|+ .+.+.+.+..|.++ +|+||+=|.= ++...+. ..++++ .++- .++.|||--.
T Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~Lk~~---~DfVIaNgENaa~G~Git~k~---~~~L~~----~GVD-vIT~GNH~wd 69 (252)
T d2z06a1 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDR---YDLVIANGENAARGKGLDRRS---YRLLRE----AGVD-LVSLGNHAWD 69 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGG---CSEEEEECTTTTTTSSCCHHH---HHHHHH----HTCC-EEECCTTTTS
T ss_pred CeEEEEeccCCHHHHHHHHHHhHHHHhh---CCEEEEeeeccCCCcCCCHHH---HHHHHH----hCCC-EEEcCccccc
Confidence 899999999997 56677777777544 6999998884 3333332 333432 1122 5788998543
Q ss_pred -HHHHHHH
Q 008383 78 -AKVLLAA 84 (567)
Q Consensus 78 -~~~~~~l 84 (567)
.++++.+
T Consensus 70 kkei~~~i 77 (252)
T d2z06a1 70 HKEVYALL 77 (252)
T ss_dssp CTTHHHHH
T ss_pred chhhhhhh
Confidence 2344433
|