Citrus Sinensis ID: 008392

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------

MKWYKTTLCLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPLFKYIIFVLGADDNGEGGTFALYSILCRRAKVGLLSASHAPDGDISACSSQLPLKETRGSVLLKEFFDKHHNSRILLLLVVLLGTSMVIGDGILTPAMSVLSAINGIKVKATGLDENYTVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKHSYESHNKGSHQCLPTLLPTFLPSTKSSYLLLFSLSQFHMFLSISNFMLAALGLKSSIFSIALSGMVIKMLGRRFMLLRVI

ccHHHHHHHHHHHHccEEEccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHEEccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHccccccHHcccHHHHHHHHHHHHHHHHHHHHHcccccHHHcccHHHHHHHHHHccccEEEEEcHHHHHHHcHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccEEEHHHHHHHHHHHHHHEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEccccccccccccEEEEccccEEEEEEEEEEcEEccccccEEEEEEEc

ccHHHHHHHHHHHHccEEEcccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccHHHHHHHHHHHHHccccccccccHHHHHHcccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHEHEccccccHHHHHHHHHcccEcccccccccEEHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHEcccHHHHHHccHHHHHHHHHHcccccEEEccEEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccEEEEEHcccccHHHHHHHcccccccEEEEEEHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHEEEEcc

MKWYKTTLCLAYQSfgvvygdlsispiyvykstfsgklrsheeddeILGVFSLVFWTLTVIPLFKYIIFVLgaddngeggtFALYSILCRRAKVgllsashapdgdisacssqlplketrgsvLLKEFFDKHHNSRILLLLVVLLGTsmvigdgilTPAMSVLSAINGIKVKATGLDENYTVLIASLMLVGLFALqhfgthrvgflFAPVLLAWLLCISIVGFyntvrwnpgvvralspYYVYIFFKKagkdgwsslGGVVLCVTGAEAMfadlghfshlpiRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFkaipeavfwPVFIIATLATAVASQAIISATFSIISQCralscfprvkimhtsnqihgqiyipemNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAkvhkggwlpLVFSLVTLSIMCIWQygtlkkhsyeshnkgshqclptllptflpstksSYLLLFSLSQFHMFLSISNFMLAALGLKSSIFSIALSGMVIKMLGRRFMLLRVI

MKWYKTTLCLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPLFKYIIFVLGADDNGEGGTFALYSILCRRAKVGLLSASHAPDGDISACSSQLPLKETRGSVLLKEFFDKHHNSRIllllvvllGTSMVIGDGILTPAMSVLSAINGIKVKATGLDENYTVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKHSYESHNKGSHQClptllptflpstkssylllfslsQFHMFLSISNFMLAALGLKSSIFSIALSGMVIKMLGRRFMLLRVI

**WYKTTLCLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPLFKYIIFVLGADDNGEGGTFALYSILCRRAKVGLLSASH********C***LPLKETRGSVLLKEFFDKHHNSRILLLLVVLLGTSMVIGDGILTPAMSVLSAINGIKVKATGLDENYTVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKHSYESHNKGSHQCLPTLLPTFLPSTKSSYLLLFSLSQFHMFLSISNFMLAALGLKSSIFSIALSGMVIKMLGRRFMLLR**

****KTT*CLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPLFKYIIFVLGADDNGEGGTFALYSILCRRAKVGLLSASH**DG***********************FDKHHNSRILLLLVVLLGTSMVIGDGILTPAMSVLSAINGIKVKATGLDENYTVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKHSYESHNKGSHQCLP*LL*****STKSSYLLLFSLSQFHMFLSISNFMLAALGLKSSIFSIALSGMVIKMLGRRFMLLRVI

MKWYKTTLCLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPLFKYIIFVLGADDNGEGGTFALYSILCRRAKVGLLSASHAPDGDISACSSQLPLKETRGSVLLKEFFDKHHNSRILLLLVVLLGTSMVIGDGILTPAMSVLSAINGIKVKATGLDENYTVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKH**********QCLPTLLPTFLPSTKSSYLLLFSLSQFHMFLSISNFMLAALGLKSSIFSIALSGMVIKMLGRRFMLLRVI

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		567	2.2.26 [Sep-21-2011]
Q652J4		778	Probable potassium transp	yes	no	0.867	0.632	0.699	0.0
O22397		712	Potassium transporter 1 O	yes	no	0.881	0.702	0.608	0.0
Q942X8		783	Probable potassium transp	no	no	0.885	0.641	0.561	1e-174
Q8H3P9		811	Potassium transporter 7 O	no	no	0.881	0.616	0.568	1e-169
Q7XIV8		788	Probable potassium transp	no	no	0.864	0.621	0.553	1e-164
Q8W4I4		782	Potassium transporter 6 O	no	no	0.883	0.640	0.555	1e-164
Q5ZC87		808	Probable potassium transp	no	no	0.890	0.625	0.557	1e-162
Q9M7J9		781	Potassium transporter 8 O	no	no	0.881	0.640	0.553	1e-162
Q8VXB5		793	Putative potassium transp	no	no	0.864	0.617	0.553	1e-161
Q67VS5		843	Potassium transporter 10	no	no	0.887	0.596	0.519	1e-157

>sp\|Q652J4\|HAK13_ORYSJ Probable potassium transporter 13 OS=Oryza sativa subsp. japonica GN=HAK13 PE=2 SV=1	Back alignment and function desciption

 Score =  697 bits (1798), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/492 (69%), Positives = 413/492 (83%)

Query: 3   WYKTTLCLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIP 62
           W K TL LAYQSFGVVYGDL ISP+YVYK+TFSGKLR HEED+EILGV SLVFW+LT+IP
Sbjct: 23  WQKGTLLLAYQSFGVVYGDLCISPVYVYKNTFSGKLRLHEEDEEILGVLSLVFWSLTLIP 82

Query: 63  LFKYIIFVLGADDNGEGGTFALYSILCRRAKVGLLSASHAPDGDISACSSQLPLKETRGS 122
           L KYII VLGADDNGEGGTFALYS+LCR +K+GLL+   A  G +SA + + P KE+R S
Sbjct: 83  LLKYIILVLGADDNGEGGTFALYSLLCRNSKMGLLNNMRANHGSLSAYNKEEPCKESRNS 142

Query: 123 VLLKEFFDKHHNSRILLLLVVLLGTSMVIGDGILTPAMSVLSAINGIKVKATGLDENYTV 182
           +L+K FF+KH++ R++LLL VL+GTSMVIGDG+LTP MSVL+A++G+++K   L ENYTV
Sbjct: 143 MLIKAFFEKHYSLRVVLLLFVLMGTSMVIGDGVLTPTMSVLAAVSGLRIKFPELHENYTV 202

Query: 183 LIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYV 242
           L+A ++L+GLFALQH+GT RVGFLFAP+L++WL CI  +G YN ++WNP V+RALSPYY+
Sbjct: 203 LLACVILIGLFALQHYGTRRVGFLFAPILISWLTCIGGIGIYNIIKWNPSVIRALSPYYI 262

Query: 243 YIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEA 302
           Y FF+KAGKDGWSSLGG+VLC+TGAEAMFADLGHFS L +R+ F  VVYPCL+LAYMGEA
Sbjct: 263 YNFFRKAGKDGWSSLGGIVLCLTGAEAMFADLGHFSKLSLRLGFTIVVYPCLVLAYMGEA 322

Query: 303 AFYTKHKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPR 362
           A+ +KH+EDL+ SF+KA+P+ VFWPV  IATLATAV SQAIISATFSIISQCRAL CFPR
Sbjct: 323 AYLSKHREDLQSSFYKALPDRVFWPVLFIATLATAVGSQAIISATFSIISQCRALGCFPR 382

Query: 363 VKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMF 422
           +K++HTS+ +HGQIYIPE+NW+LM  CL V +GFRDT+MI NAYGLAVI VM  TTCLMF
Sbjct: 383 IKVVHTSSHVHGQIYIPEVNWVLMSLCLAVTIGFRDTEMIGNAYGLAVILVMCATTCLMF 442

Query: 423 LIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYG 482
           L+I  VW R V+ A AF VVFGS+ELLYLSACLAKV  GGWLPL+ SL TL +M  W YG
Sbjct: 443 LVITTVWNRWVVWAAAFTVVFGSVELLYLSACLAKVPHGGWLPLLLSLTTLLVMSTWHYG 502

Query: 483 TLKKHSYESHNK 494
           T  K  +E  NK
Sbjct: 503 TAMKQQHEVQNK 514

High-affinity potassium transporter.
Oryza sativa subsp. japonica (taxid: 39947)

>sp\|O22397\|POT1_ARATH Potassium transporter 1 OS=Arabidopsis thaliana GN=POT1 PE=1 SV=2	Back alignment and function description

>sp\|Q942X8\|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1	Back alignment and function description

>sp\|Q8H3P9\|HAK7_ORYSJ Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3	Back alignment and function description

>sp\|Q7XIV8\|HAK9_ORYSJ Probable potassium transporter 9 OS=Oryza sativa subsp. japonica GN=HAK9 PE=2 SV=1	Back alignment and function description

>sp\|Q8W4I4\|POT6_ARATH Potassium transporter 6 OS=Arabidopsis thaliana GN=POT6 PE=2 SV=1	Back alignment and function description

>sp\|Q5ZC87\|HAK3_ORYSJ Probable potassium transporter 3 OS=Oryza sativa subsp. japonica GN=HAK3 PE=2 SV=1	Back alignment and function description

>sp\|Q9M7J9\|POT8_ARATH Potassium transporter 8 OS=Arabidopsis thaliana GN=POT8 PE=2 SV=2	Back alignment and function description

>sp\|Q8VXB5\|HAK8_ORYSJ Putative potassium transporter 8 OS=Oryza sativa subsp. japonica GN=HAK8 PE=2 SV=2	Back alignment and function description

>sp\|Q67VS5\|HAK10_ORYSJ Potassium transporter 10 OS=Oryza sativa subsp. japonica GN=HAK10 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		567
302143247		708	unnamed protein product [Vitis vinifera]	0.892	0.714	0.749	0.0
359495323		727	PREDICTED: probable potassium transporte	0.892	0.696	0.749	0.0
224075252		731	predicted protein [Populus trichocarpa]	0.857	0.664	0.731	0.0
147789997		729	hypothetical protein VITISV_041093 [Viti	0.892	0.694	0.709	0.0
359494487		774	PREDICTED: probable potassium transporte	0.892	0.653	0.709	0.0
255544650		732	Potassium transporter, putative [Ricinus	0.864	0.669	0.740	0.0
357123393		757	PREDICTED: probable potassium transporte	0.864	0.647	0.701	0.0
224081413		683	predicted protein [Populus trichocarpa]	0.878	0.729	0.700	0.0
222636068		778	hypothetical protein OsJ_22324 [Oryza sa	0.867	0.632	0.699	0.0
115469462		778	Os06g0671000 [Oryza sativa Japonica Grou	0.867	0.632	0.699	0.0

>gi\|302143247\|emb\|CBI20542.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/510 (74%), Positives = 434/510 (85%), Gaps = 4/510 (0%)

Query: 1   MKWYKTTLCLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTV 60
           +K Y TTLCLAYQSFGVVYGDLSISPIYVYKSTFSG+LR HE++DEILGV SLVFWTLT+
Sbjct: 14  LKLYTTTLCLAYQSFGVVYGDLSISPIYVYKSTFSGRLRLHEDNDEILGVLSLVFWTLTL 73

Query: 61  IPLFKYIIFVLGADDNGEGGTFALYSILCRRAKVGLLSASHAPDGDISACSSQLPLKETR 120
           IPL KYIIFVLGADDNGEGGTFALYS+LCR AKVGLLS  HA D + S  +S   LKETR
Sbjct: 74  IPLCKYIIFVLGADDNGEGGTFALYSLLCRHAKVGLLSTFHASDDNASFYNSGPSLKETR 133

Query: 121 GSVLLKEFFDKHHNSRILLLLVVLLGTSMVIGDGILTPAMSVLSAINGIKVKATGLDENY 180
            S +LK+FF+KH +S+I+LLL VLLGT MVIGDG+LTP+MSVLSA+ G+KVK   L ENY
Sbjct: 134 SSSILKQFFEKHWSSQIVLLLFVLLGTGMVIGDGVLTPSMSVLSAVYGVKVKIPNLHENY 193

Query: 181 TVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPY 240
           TV IA ++LVGLFALQH+GTHRVGFLFAP+L+AWLL IS VG YN + WNP +V ALSPY
Sbjct: 194 TVCIACVILVGLFALQHYGTHRVGFLFAPILIAWLLSISGVGIYNILHWNPRIVSALSPY 253

Query: 241 YVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMG 300
           Y Y FFK+ GKDGW SLGG+VLC+TGAEAMFADLGHFS + +R+AF   VYPCLILAYMG
Sbjct: 254 YAYNFFKETGKDGWRSLGGIVLCITGAEAMFADLGHFSQISVRLAFTLFVYPCLILAYMG 313

Query: 301 EAAFYTKHKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCF 360
           EAA+ ++HKEDL+ SF+KAIPE +FWPVFIIATLAT V SQAIISATFSIISQCRALSCF
Sbjct: 314 EAAYLSQHKEDLQSSFYKAIPEVIFWPVFIIATLATVVGSQAIISATFSIISQCRALSCF 373

Query: 361 PRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCL 420
           PRV+I+HTSNQIHGQIYIPE+NWILM  CL VV+GFRDTDMI NAYGLAVI VM +TTCL
Sbjct: 374 PRVRIIHTSNQIHGQIYIPEVNWILMFLCLAVVIGFRDTDMIGNAYGLAVIIVMLITTCL 433

Query: 421 MFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQ 480
           MFL+IVMVWKR +LVAI FV++FGS+ELLY SAC+ KVHKGGW+P+V SL+ L  M IW 
Sbjct: 434 MFLVIVMVWKRTILVAITFVIIFGSIELLYFSACITKVHKGGWVPIVLSLIVLFFMSIWH 493

Query: 481 YGTLKKHSYESHNKGSHQCLPTLLPTFLPS 510
           YGTLKK S+E  NK    CL TLL T  PS
Sbjct: 494 YGTLKKRSFELQNK---VCLDTLL-TLGPS 519

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359495323\|ref\|XP_002271119.2\| PREDICTED: probable potassium transporter 13-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224075252\|ref\|XP_002304582.1\| predicted protein [Populus trichocarpa] gi\|222842014\|gb\|EEE79561.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|147789997\|emb\|CAN62930.1\| hypothetical protein VITISV_041093 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359494487\|ref\|XP_002265329.2\| PREDICTED: probable potassium transporter 13-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255544650\|ref\|XP_002513386.1\| Potassium transporter, putative [Ricinus communis] gi\|223547294\|gb\|EEF48789.1\| Potassium transporter, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|357123393\|ref\|XP_003563395.1\| PREDICTED: probable potassium transporter 13-like [Brachypodium distachyon]	Back alignment and taxonomy information

>gi\|224081413\|ref\|XP_002306400.1\| predicted protein [Populus trichocarpa] gi\|222855849\|gb\|EEE93396.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|222636068\|gb\|EEE66200.1\| hypothetical protein OsJ_22324 [Oryza sativa Japonica Group]	Back alignment and taxonomy information

>gi|115469462|ref|NP_001058330.1| Os06g0671000 [Oryza sativa Japonica Group] gi|75114430|sp|Q652J4.1|HAK13_ORYSJ RecName: Full=Probable potassium transporter 13; AltName: Full=OsHAK13 gi|52076987|dbj|BAD45996.1| putative potassium transporter KUP3p [Oryza sativa Japonica Group] gi|52077230|dbj|BAD46273.1| putative potassium transporter KUP3p [Oryza sativa Japonica Group] gi|113596370|dbj|BAF20244.1| Os06g0671000 [Oryza sativa Japonica Group] gi|218198727|gb|EEC81154.1| hypothetical protein OsI_24069 [Oryza sativa Indica Group]

Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		567
TAIR\|locus:2045639		712	KT1 "potassium transporter 1"	0.860	0.685	0.607	1.1e-167
TAIR\|locus:2016139		782	KUP6 "K+ uptake permease 6" [A	0.865	0.627	0.556	4.2e-150
TAIR\|locus:2078688		789	KUP3 "AT3G02050" [Arabidopsis	0.873	0.627	0.532	8.8e-150
TAIR\|locus:2185515		781	KUP8 "potassium uptake 8" [Ara	0.869	0.631	0.548	3.4e-148
TAIR\|locus:2061838		794	KT2 "potassium transporter 2"	0.867	0.619	0.527	1.2e-145
TAIR\|locus:2128399		775	TRH1 "TINY ROOT HAIR 1" [Arabi	0.857	0.627	0.527	1.3e-139
TAIR\|locus:2195688		827	AT1G60160 [Arabidopsis thalian	0.851	0.584	0.509	2.1e-132
TAIR\|locus:2142110		785	HAK5 "high affinity K+ transpo	0.864	0.624	0.461	7.6e-128
TAIR\|locus:2029589		796	KUP10 "K+ uptake permease 10"	0.855	0.609	0.470	3.7e-126
TAIR\|locus:2044717		793	KUP11 "K+ uptake permease 11"	0.848	0.606	0.469	3.9e-124

TAIR\|locus:2045639 KT1 "potassium transporter 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1631 (579.2 bits), Expect = 1.1e-167, P = 1.1e-167
 Identities = 297/489 (60%), Positives = 377/489 (77%)

Query:     8 LCLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPLFKYI 67
             L LAYQS GV+YGDLS SP+YVYK+TFSGKL  HE+D+EI GVFS +FWT T+I LFKY+
Sbjct:    26 LTLAYQSLGVIYGDLSTSPLYVYKTTFSGKLSLHEDDEEIFGVFSFIFWTFTLIALFKYV 85

Query:    68 IFVLGADDNGEGGTFALYSILCRRAKVGLLSASHAPDGDISACSSQLPLKETRGSVLLKE 127
               VL ADDNGEGGTFALYS+LCR AK+ +L      D  +S  ++  P  ETR S  +K 
Sbjct:    86 FIVLSADDNGEGGTFALYSLLCRYAKLSILPNHQEMDEKLSTYATGSP-GETRQSAAVKS 144

Query:   128 FFDKHHNSRIXXXXXXXXGTSMVIGDGILTPAMSVLSAINGIKVKATGLDENYTVLIASL 187
             FF+KH  S+         GT M IGD +LTP +SVLSA++G+K+K   L ENY V+IA +
Sbjct:   145 FFEKHPKSQKCLLLFVLLGTCMAIGDSVLTPTISVLSAVSGVKLKIPNLHENYVVIIACI 204

Query:   188 MLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVYIFFK 247
             +LV +F++Q +GTHRV F+FAP+  AWLL IS +G YNT++WNP +V ALSP Y+Y F +
Sbjct:   205 ILVAIFSVQRYGTHRVAFIFAPISTAWLLSISSIGVYNTIKWNPRIVSALSPVYMYKFLR 264

Query:   248 KAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTK 307
               G +GW SLGGVVL +TG E MFADLGHFS L I++AF+  VYPCLILAYMGEAAF +K
Sbjct:   265 STGVEGWVSLGGVVLSITGVETMFADLGHFSSLSIKVAFSFFVYPCLILAYMGEAAFLSK 324

Query:   308 HKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMH 367
             H ED+++SF+KAIPE VFWPVFI+AT A  V SQA+ISATFSIISQC AL CFPRVKI+H
Sbjct:   325 HHEDIQQSFYKAIPEPVFWPVFIVATFAAVVGSQAVISATFSIISQCCALDCFPRVKIIH 384

Query:   368 TSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFLIIVM 427
             TS++IHGQIYIPE+NW+LM  CL V +G RDT+M+ +AYGLAV +VM VTTCLM L++ +
Sbjct:   385 TSSKIHGQIYIPEVNWMLMCLCLAVTIGLRDTNMMGHAYGLAVTSVMLVTTCLMTLVMTI 444

Query:   428 VWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGTLKKH 487
             VWK++++  +AFVV FGS+ELLY S+C+ KV +GGW+P++ SL  +++M IW YGT KKH
Sbjct:   445 VWKQRIITVLAFVVFFGSIELLYFSSCVYKVPEGGWIPILLSLTFMAVMYIWNYGTTKKH 504

Query:   488 SYESHNKGS 496
              ++  NK S
Sbjct:   505 EFDVENKVS 513

GO:0005886 "plasma membrane" evidence=ISM

GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;IGI;ISS

GO:0016020 "membrane" evidence=IEA;NAS

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IC

TAIR\|locus:2016139 KUP6 "K+ uptake permease 6" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2185515 KUP8 "potassium uptake 8" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2128399 TRH1 "TINY ROOT HAIR 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2142110 HAK5 "high affinity K+ transporter 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O22397	POT1_ARATH	No assigned EC number	0.6087	0.8818	0.7022	yes	no
Q652J4	HAK13_ORYSJ	No assigned EC number	0.6991	0.8677	0.6323	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00035544001	SubName- Full=Chromosome undetermined scaffold_79, whole genome shotgun sequence; (742 aa)
		(Vitis vinifera)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		567
PLN00148		785	PLN00148, PLN00148, potassium transporter; Provisi	0.0
PLN00149		779	PLN00149, PLN00149, potassium transporter; Provisi	0.0
PLN00150		779	PLN00150, PLN00150, potassium ion transporter fami	0.0
TIGR00794		688	TIGR00794, kup, potassium uptake protein	0.0
PLN00151		852	PLN00151, PLN00151, potassium transporter; Provisi	0.0
pfam02705		534	pfam02705, K_trans, K+ potassium transporter	0.0
COG3158		627	COG3158, Kup, K+ transporter [Inorganic ion transp	1e-133
PRK10745		622	PRK10745, trkD, potassium transport protein Kup; P	1e-101

>gnl\|CDD\|215077 PLN00148, PLN00148, potassium transporter; Provisional	Back alignment and domain information

 Score =  693 bits (1789), Expect = 0.0
 Identities = 297/503 (59%), Positives = 381/503 (75%), Gaps = 1/503 (0%)

Query: 4   YKTTLCLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPL 63
               L LAYQSFGVVYGDLS SP+YVYKSTFSGKL+ H+ ++ I G FSL+FWT T+IPL
Sbjct: 21  LSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTLIPL 80

Query: 64  FKYIIFVLGADDNGEGGTFALYSILCRRAKVGLLSASHAPDGDISACSSQLPLKETRGSV 123
            KY+  +L ADDNGEGGTFALYS+LCR AK+ LL    A D ++SA     P  +T GS 
Sbjct: 81  LKYVTILLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYG-PSTQTVGSS 139

Query: 124 LLKEFFDKHHNSRILLLLVVLLGTSMVIGDGILTPAMSVLSAINGIKVKATGLDENYTVL 183
            LK F +KH   R  LLLVVL G  MVIGDG+LTPA+SVLS+++G++V  T L +   VL
Sbjct: 140 PLKRFLEKHKRLRTALLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTETKLTDGELVL 199

Query: 184 IASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALSPYYVY 243
           +A ++LVGLFALQH GTHRV F+FAP+++ WLL I  +G YN + WNP ++ ALSPYY+ 
Sbjct: 200 LACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSPYYII 259

Query: 244 IFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAA 303
            FF+  GKDGW SLGG++L +TG EAMFADLGHF+   IR+AFATV+YPCL++ YMG+AA
Sbjct: 260 KFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAA 319

Query: 304 FYTKHKEDLERSFFKAIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRV 363
           F +K+   +  SF+ +IP+ VFWPVF+IATLA  V SQA+I+ATFSI+ QC AL CFPRV
Sbjct: 320 FLSKNIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRV 379

Query: 364 KIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCLMFL 423
           K++HTS  I+GQIYIPE+NWILMI  L V +GFRDT +I NAYGLA +TVMF+TT LM L
Sbjct: 380 KVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMAL 439

Query: 424 IIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCIWQYGT 483
           +I+ VW++ +++A  F++ FG +E +YLSA L KV +GGW+PLV S + +SIM IW YGT
Sbjct: 440 VIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIWHYGT 499

Query: 484 LKKHSYESHNKGSHQCLPTLLPT 506
            KK++++ HNK S + L  L P+
Sbjct: 500 RKKYNFDLHNKVSLKWLLGLGPS 522

Length = 785

>gnl\|CDD\|177753 PLN00149, PLN00149, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional	Back alignment and domain information

>gnl\|CDD\|129876 TIGR00794, kup, potassium uptake protein	Back alignment and domain information

>gnl\|CDD\|215079 PLN00151, PLN00151, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|217193 pfam02705, K_trans, K+ potassium transporter	Back alignment and domain information

>gnl\|CDD\|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|182693 PRK10745, trkD, potassium transport protein Kup; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		567
PLN00148		785	potassium transporter; Provisional	100.0
PLN00151		852	potassium transporter; Provisional	100.0
PLN00149		779	potassium transporter; Provisional	100.0
PLN00150		779	potassium ion transporter family protein; Provisio	100.0
TIGR00794		688	kup potassium uptake protein. Proteins of the KUP	100.0
PF02705		534	K_trans: K+ potassium transporter; InterPro: IPR00	100.0
PRK10745		622	trkD potassium transport protein Kup; Provisional	100.0
COG3158		627	Kup K+ transporter [Inorganic ion transport and me	100.0
TIGR00911		501	2A0308 L-type amino acid transporter.	94.95
COG0531		466	PotE Amino acid transporters [Amino acid transport	88.52
TIGR00909		429	2A0306 amino acid transporter.	87.95
PF13520		426	AA_permease_2: Amino acid permease; PDB: 3NCY_A 3G	85.92
TIGR03813		474	put_Glu_GABA_T putative glutamate/gamma-aminobutyr	85.71
PRK15049		499	L-asparagine permease; Provisional	84.48
PRK10435		435	cadB lysine/cadaverine antiporter; Provisional	81.2
PRK10655		438	potE putrescine transporter; Provisional	80.62
TIGR00907		482	2A0304 amino acid permease (GABA permease).	80.01

>PLN00148 potassium transporter; Provisional	Back alignment and domain information

Probab=100.00  E-value=4.8e-198  Score=1625.97  Aligned_cols=522  Identities=57%  Similarity=1.015  Sum_probs=509.5

Q ss_pred             chHHH---HHHHHHhhcceeecccCCChHHHHHHhcCCCCCCCCCchhhhhhHHHHHHHHHHhhhhheeeeEEeecCCCC
Q 008392            2 KWYKT---TLCLAYQSFGVVYGDLSISPIYVYKSTFSGKLRSHEEDDEILGVFSLVFWTLTVIPLFKYIIFVLGADDNGE   78 (567)
Q Consensus         2 ~~~~~---~~~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~ilGvlSLIfWtLtLiv~iKYv~ivlrAdn~GE   78 (567)
                      ++|++   ++.|++||+|||||||||||||||+++|+++++.++++|||+|+||||||||||++++|||+||||||||||
T Consensus        16 ~~w~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~~~~ilGvLSLIfWtLtLiv~iKYV~ivlrAdn~GE   95 (785)
T PLN00148         16 LSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTLIPLLKYVTILLSADDNGE   95 (785)
T ss_pred             chhhHHhHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHHHhHHHHHHHHHHHHHHHhheEEEEEecCCCC
Confidence            47887   889999999999999999999999999987766779999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHhhhcccccCCCCCCCCCcccccccCCCcccccchhhhHHhhhcccchHHHHHHHHHHhhhhhccCccccc
Q 008392           79 GGTFALYSILCRRAKVGLLSASHAPDGDISACSSQLPLKETRGSVLLKEFFDKHHNSRILLLLVVLLGTSMVIGDGILTP  158 (567)
Q Consensus        79 GGifALysLl~r~~k~~~~p~~~~~d~~ls~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~Gaal~~gDGviTP  158 (567)
                      |||||||||+||++|++++||||++||++++|++++++.+ +++.++|+++|+|++.|+++++++++|+||++|||+|||
T Consensus        96 GG~fALysLl~r~~~~~~~pn~~~~d~~ls~~~~~~~~~~-~~~~~~k~~lE~~~~~~~~ll~l~l~G~am~~gDgvlTP  174 (785)
T PLN00148         96 GGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSTQT-VGSSPLKRFLEKHKRLRTALLLVVLFGACMVIGDGVLTP  174 (785)
T ss_pred             chHHHHHHHHHHhcccccCccchhhhhhhhhhccCccccc-hhhhHHHHHhhhchHHHHHHHHHHHHHHHHHHhccccch
Confidence            9999999999999999999999999999999988666555 556779999999999999999999999999999999999


Q ss_pred             hhhhhhhhccccccccCCCCceEeehHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHhHhhccCCcceeeecC
Q 008392          159 AMSVLSAINGIKVKATGLDENYTVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFYNTVRWNPGVVRALS  238 (567)
Q Consensus       159 AISVLSAVeGL~v~~p~l~~~~Vv~Is~~ILv~LF~iQ~~GT~kvg~~FgPIm~vWF~~i~~iGiynI~~~~P~Vl~Aln  238 (567)
                      ||||||||||||+.+|++++++|+||||+||++||++||+||+|||++|||||++||++|+++|+|||++|||+||+|+|
T Consensus       175 AISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~Aln  254 (785)
T PLN00148        175 AISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALS  254 (785)
T ss_pred             hHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcC
Confidence            99999999999999999988899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCccchhhhcchhhhccchhhhhccCCCCCCcceeehhhHhHHHHHHHhhccchhhhccccccccccccc
Q 008392          239 PYYVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHFSHLPIRIAFATVVYPCLILAYMGEAAFYTKHKEDLERSFFK  318 (567)
Q Consensus       239 P~Ya~~ff~~~g~~g~~~LG~VvL~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~Ll~~p~~~~npFf~  318 (567)
                      |+|+++||.+||++||.+||+|+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+
T Consensus       255 P~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~  334 (785)
T PLN00148        255 PYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYD  334 (785)
T ss_pred             HHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccchHHHHHHHHHHHHHhhhhhhhchhhHHHHHHHcCCCCceeEEecCCccCCcccchhhHHHHHHHhheeEEEecC
Q 008392          319 AIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQIYIPEMNWILMIFCLGVVVGFRD  398 (567)
Q Consensus       319 ~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR~kI~hTS~~~~GQIYIP~VNwlLmi~~i~vvl~F~~  398 (567)
                      ++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++|||
T Consensus       335 ~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~  414 (785)
T PLN00148        335 SIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRD  414 (785)
T ss_pred             hCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHHhheeecc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhHHhhhhhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhccccCccHHHHHHHHHHHHHHH
Q 008392          399 TDMIANAYGLAVITVMFVTTCLMFLIIVMVWKRKVLVAIAFVVVFGSLELLYLSACLAKVHKGGWLPLVFSLVTLSIMCI  478 (567)
Q Consensus       399 S~~L~~AYGiAV~~~M~iTT~L~~~v~~~vw~~~~~~~~~f~~~F~~ie~~ffsanl~K~~~GGW~pL~ia~v~~~iM~t  478 (567)
                      |++||||||+||++||++||+|+++||+.+||||++++++|+++|+.+|+.|||||+.|++||||+|+++|++++++|++
T Consensus       415 s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~  494 (785)
T PLN00148        415 TTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYI  494 (785)
T ss_pred             chhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhHHHHHHhhhhCCCCcchhhhhCCCCCCccccceeEeeccccc
Q 008392          479 WQYGTLKKHSYESHNKGSHQCLPTLLPTFLPSTKSSYLLLFSLSQF  524 (567)
Q Consensus       479 W~~G~~~~~~~~~~~~~~l~~~~~~~~~l~~~R~pg~gl~y~~~~~  524 (567)
                      ||||++++++++.+|++|++++.++.++.|+.||||+|++|+-..-
T Consensus       495 W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~  540 (785)
T PLN00148        495 WHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELAT  540 (785)
T ss_pred             HHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCC
Confidence            9999999999999999999999999999999999999999986654

>PLN00151 potassium transporter; Provisional	Back alignment and domain information

>PLN00149 potassium transporter; Provisional	Back alignment and domain information

>PLN00150 potassium ion transporter family protein; Provisional	Back alignment and domain information

>TIGR00794 kup potassium uptake protein	Back alignment and domain information

>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members	Back alignment and domain information

>PRK10745 trkD potassium transport protein Kup; Provisional	Back alignment and domain information

>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR00911 2A0308 L-type amino acid transporter	Back alignment and domain information

>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR00909 2A0306 amino acid transporter	Back alignment and domain information

>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A	Back alignment and domain information

>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter	Back alignment and domain information

>PRK15049 L-asparagine permease; Provisional	Back alignment and domain information

>PRK10435 cadB lysine/cadaverine antiporter; Provisional	Back alignment and domain information

>PRK10655 potE putrescine transporter; Provisional	Back alignment and domain information

>TIGR00907 2A0304 amino acid permease (GABA permease)	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		567
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 43.7 bits (102), Expect = 2e-04
 Identities = 46/292 (15%), Positives = 76/292 (26%), Gaps = 78/292 (26%)

Query: 17  VVYGDLSISPIYVYKSTFSGK-------LRSHEEDDEILGVFSL-VFWTLTVIPLFKYII 68
           ++ G L            SGK               ++       +FW L +        
Sbjct: 154 LIDGVLG-----------SGKTWVALDVCL----SYKVQCKMDFKIFW-LNL-------- 189

Query: 69  FVLGADDNGEGGTFALYSILCRRAKVGLLSASHAPDGDISACSSQLPLKETRGSVLLKEF 128
                + N       +   L  +      S S          SS + L+       L+  
Sbjct: 190 ----KNCNSPETVLEMLQKLLYQIDPNWTSRSDH--------SSNIKLRIHSIQAELRRL 237

Query: 129 FDKHHNSRILLLL--V----VL----LGTSMVIGDGILTPAMSVLSAINGIKVKATGLDE 178
                    LL+L  V          L   ++    + T    V   ++        LD 
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL----LTTRFKQVTDFLSAATTTHISLDH 293

Query: 179 NYTVLIASLMLVGLFALQHFGTHRVGFLFAPVLLAWLLCISIVGFY---NTVRWNPGVVR 235
           +   L    +   L     +   R   L   VL      +SI+          W+     
Sbjct: 294 HSMTLTPDEVK-SLLLK--YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD----- 345

Query: 236 ALSPYYVYIFFKKAGKDGWSSLGGVVLCVTGAEAMFADLGHF---SHLPIRI 284
                + ++   K      SSL   VL       MF  L  F   +H+P  +
Sbjct: 346 ----NWKHVNCDKLTTIIESSLN--VLEPAEYRKMFDRLSVFPPSAHIPTIL 391

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		567
3gia_A		444	Uncharacterized protein MJ0609; membrane protein,	97.18
4djk_A		511	Probable glutamate/gamma-aminobutyrate antiporter;	96.97
3l1l_A		445	Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC	96.5

>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C	Back alignment and structure

Probab=97.18  E-value=0.0059  Score=62.36  Aligned_cols=248  Identities=12%  Similarity=0.043  Sum_probs=111.2

Q ss_pred             ccccchhhhhhhhccccccccCCCCc-eEeehHHHHHHHHHHHhhhcccccccc---hhhHHHHHHHHHHHHHhHhhccC
Q 008392          154 GILTPAMSVLSAINGIKVKATGLDEN-YTVLIASLMLVGLFALQHFGTHRVGFL---FAPVLLAWLLCISIVGFYNTVRW  229 (567)
Q Consensus       154 GviTPAISVLSAVeGL~v~~p~l~~~-~Vv~Is~~ILv~LF~iQ~~GT~kvg~~---FgPIm~vWF~~i~~iGiynI~~~  229 (567)
                      -+++.|....+..+=++...|..++. +...+++++++.+..+..+|.+..++.   +.++.++=++.+.+.|+.+.   
T Consensus        97 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~i~~~~~~ii~~~~~~---  173 (444)
T 3gia_A           97 YVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITI---  173 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---
Confidence            34556666655555554433433321 233567888888889999998877664   44444444444445555543   


Q ss_pred             Ccceeee-cCHHHHHHHHHhcCccc-hhhhcchhhhccchhhhhccCCCCC--CcceeehhhHhHHHHHHHhhccchhhh
Q 008392          230 NPGVVRA-LSPYYVYIFFKKAGKDG-WSSLGGVVLCVTGAEAMFADLGHFS--HLPIRIAFATVVYPCLILAYMGEAAFY  305 (567)
Q Consensus       230 ~P~Vl~A-lnP~Ya~~ff~~~g~~g-~~~LG~VvL~iTGaEALyADmGHFg--~~~Ir~aw~~~V~P~L~LnY~GQgA~L  305 (567)
                      +|+-+.. ++|.         +..+ +..+...+.+.+|-|+.-.=-+...  +|.+..+-..-+.-+.++.-...-+..
T Consensus       174 ~~~~~~~~~~~~---------g~~~~~~~~~~~~~a~~G~e~~~~~~~e~k~P~r~ip~ai~~~~~~~~~~y~~~~~~~~  244 (444)
T 3gia_A          174 HPSYVIPDLAPS---------AVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAI  244 (444)
T ss_dssp             CGGGTSCCCSHH---------HHHHHHHHHHHGGGGGTHHHHHHTTGGGBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhhcCCCCCCc---------chHHHHHHHHHHHHHHHhHHHHHHHHHHccCcccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            4443322 3332         1112 2334445688899997633222222  233444433211111111111111111


Q ss_pred             cccc-cc----ccccccc----cccccchHHHHHHHHHHHHHhhhhhhhchhhHHHHHHHcCCCCceeEEecCCccCCcc
Q 008392          306 TKHK-ED----LERSFFK----AIPEAVFWPVFIIATLATAVASQAIISATFSIISQCRALSCFPRVKIMHTSNQIHGQI  376 (567)
Q Consensus       306 l~~p-~~----~~npFf~----~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR~kI~hTS~~~~GQI  376 (567)
                      ..-| ++    .++|+-.    ..+++..+-+.+.+.++..-+.-+.+.+.=-+....-+.|.+||.    =+++.++. 
T Consensus       245 ~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a~a~dg~lP~~----f~~~~~~~-  319 (444)
T 3gia_A          245 GNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEF----FERKVWFK-  319 (444)
T ss_dssp             TTSCHHHHHHTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHSSCCSS----CCTTSCCS-
T ss_pred             hCCCHHHHhcccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH----HhCCCCCC-
Confidence            1111 11    1233321    122333322222222333222333333433345555678999963    12222222 


Q ss_pred             cchhhHHHHHHHhheeEEEecCchhHHhhhhhHHHHHHHHHHHH
Q 008392          377 YIPEMNWILMIFCLGVVVGFRDTDMIANAYGLAVITVMFVTTCL  420 (567)
Q Consensus       377 YIP~VNwlLmi~~i~vvl~F~~S~~L~~AYGiAV~~~M~iTT~L  420 (567)
                        |...-++......+...+-+-+.+.+.+.++...+..++.+-
T Consensus       320 --P~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  361 (444)
T 3gia_A          320 --STEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILS  361 (444)
T ss_dssp             --CTHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --CcHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence              553322222212222223466778888777776666555443

PyMOL of 3gia

>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A	Back alignment and structure

>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00