Citrus Sinensis ID: 008470


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560----
MKHGGSRRRRLSVQTMLVVFVICSAGVGLLMTMTMLIVRPLDTPPNTSADVFLPVENDVDSSQLLEETETETESESESETKTSTVSNPKRCATVEEMGEDFKGSIQEESLKVRKLIQRHFDLNGASRVRNLPPEQFCKHGFVLGKASEAGFGNEMYKILTGAALSVMLNRSLIIGQTRGKYPFGEYISYSNVSFTLEEVKHLWRRNGCLKKYGRHLVMRIDDFEKPPQTNVLCSNWRKWEQPIIWFQGTTDAVAAQFFLKNVHPEMRNAANDLFGHPESLHAQPNVFGELMRVLISPSEDVEEAVKWVLGNGVDPDISLHMRMLTNRSVRAVQAAVKCIRKVVNSLNLTSRPKTVIVSDTPSFAKTITPNISEFAEVLYFDYKAFRGNISHDVNRLPSLEFRAKDWGPAPRWVAFVDFFLASRAKHAVVSGAFRRVGTTYAQLIAALAAANSLGDNSTDLSFSFLSSFQSNLLTGGLRLQVGWGHVWNRFAGPLSCHHQSHQCAFTPLLPPAWWDGLWESPIPRDINRLAAFGVHLSGFGTVDENRLQSFCSSKKNSVKTSLII
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccHHHccccccccccccccccHHHHHHHHHHHHHHHHcccEEEccccccccccccEEEEccEEEHHHHHHHHHHHcccccccccEEEEEEcccccccccccccccccccccEEEEccccHHHHHHHHHHcccHHHHHHHHHHcccccccccccccHHHHHHHHccccHHHHHHHHHHHcccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccEEEEccccHHHHHHcccccccHHEEEEEHHHHHcccccccccccccccccccccccccHHHHHHHHHHcccccEEEEcccccccccHHHHHHHHHHHHHccccccccccEEEcccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccEEcccccccHHHHHHHHHHcccccEEEccc
ccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccEHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHcccHHHHHHcccEEcccccccccHHHHHHHHHHHHHHHHHHHEEEcccccccccccEEEEccccEcHHHHHHHHHHcccHHHcccEEEEEEccccccccccEEccccccccccEEEEcccHHHHHHHHHHHHccHHHHHHHHHHHcccccccccccHHHHHHHHHccccHHHHHHHHHHHcccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccEEEEEEccHHHHHHHHHcHHHHHHHHHEcHHHHHccHHHHccccccccccEccccccccEEEHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccEEEcccHHHHHHHHHHccccccEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHcccEEcccccccHHHHHHHHHHccccEEEEEEc
mkhggsrrrrlSVQTMLVVFVICSAGVGLLMTMTMLIvrpldtppntsadvflpvendvdssqlleetetetesesesetktstvsnpkrcATVEEMGEDFKGSIQEESLKVRKLIQRHFdlngasrvrnlppeqfckhgfvlgkaseagfgnEMYKILTGAALSVMLNRSLiigqtrgkypfgeyisysnvSFTLEEVKHLWRRNGCLKKYGRHLVmriddfekppqtnvlcsnwrkweqpiiwfQGTTDAVAAQFFLKNVHPEMRNAAndlfghpeslhaqpnVFGELMRVLISPSEDVEEAVKWVLgngvdpdisLHMRMLTNRSVRAVQAAVKCIRKVVNslnltsrpktvivsdtpsfaktitpnISEFAEVLYFDYkafrgnishdvnrlpslefrakdwgpaprwVAFVDFFLASRAKHAVVSGAFRRVGTTYAQLIAALAAANslgdnstdLSFSFLSSFQSNlltgglrlqvgwghvwnrfagplschhqshqcaftpllppawwdglwespiprdiNRLAAFGVhlsgfgtvdeNRLQSFcsskknsvktslii
mkhggsrrrrlsvqTMLVVFVICSAGVGLLMTMTMLIVRPLDTPPNTSADVFLPVENDVDSSQLLEetetetesesesetktstvsnpkrcATVEEMGEDFKGSIQEESLKVRKLIQRHFDLNGASRVRNLPPEQFCKHGFVLGKASEAGFGNEMYKILTGAALSVMLNRSLIIGQTRGKYPFGEYISYSNVSFTLEEVKHLWRRNGCLKKYGRHLVmriddfekppqtnVLCSNWRKWEQPIIWFQGTTDAVAAQFFLKNVHPEMRNAANDLFGHPESLHAQPNVFGELMRVLISPSEDVEEAVKWVLGNGVDPDISLHMRMLTNRSVRAVQAAVKCIRKvvnslnltsrpktvivsdtpsfaktitpNISEFAEVLYFDYKAFRGNISHDVNRLPSLEfrakdwgpaPRWVAFVDFFLASRAKHAVVSGAFRRVGTTYAQLIAALAAANSLGDNSTDLSFSFLSSFQSNLLTGGLRLQVGWGHVWNRFAGPLSCHHQSHQCAFTPLLPPAWWDGLWESPIPRDINRLAAFGVHLSGFGTVDENrlqsfcsskknsvktslii
MKHGGSRRRRLSVQTMLVVFVICSAGVGLLMTMTMLIVRPLDTPPNTSADVFLPVENDVDSSQLLeetetetesesesetktstVSNPKRCATVEEMGEDFKGSIQEESLKVRKLIQRHFDLNGASRVRNLPPEQFCKHGFVLGKASEAGFGNEMYKILTGAALSVMLNRSLIIGQTRGKYPFGEYISYSNVSFTLEEVKHLWRRNGCLKKYGRHLVMRIDDFEKPPQTNVLCSNWRKWEQPIIWFQGTTDAVAAQFFLKNVHPEMRNAANDLFGHPESLHAQPNVFGELMRVLISPSEDVEEAVKWVLGNGVDPDISLHMRMLTNRSVRAVQAAVKCIRKVVNSLNLTSRPKTVIVSDTPSFAKTITPNISEFAEVLYFDYKAFRGNISHDVNRLPSLEFRAKDWGPAPRWVAFVDFFLASRAKHAVVSGAFRRVGTTYaqliaalaaaNSLGdnstdlsfsflssfqsnlltGGLRLQVGWGHVWNRFAGPLSCHHQSHQCAFTPLLPPAWWDGLWESPIPRDINRLAAFGVHLSGFGTVDENRLQSFCSSKKNSVKTSLII
***********SVQTMLVVFVICSAGVGLLMTMTMLIVRPLDT*******VF***********************************************************VRKLIQRHFDLNGASRVRNLPPEQFCKHGFVLGKASEAGFGNEMYKILTGAALSVMLNRSLIIGQTRGKYPFGEYISYSNVSFTLEEVKHLWRRNGCLKKYGRHLVMRIDDFEKPPQTNVLCSNWRKWEQPIIWFQGTTDAVAAQFFLKNVHPEMRNAANDLFGHPESLHAQPNVFGELMRVLISPSEDVEEAVKWVLGNGVDPDISLHMRMLTNRSVRAVQAAVKCIRKVVNSLNLTSRPKTVIVSDTPSFAKTITPNISEFAEVLYFDYKAFRGNISHDVNRLPSLEFRAKDWGPAPRWVAFVDFFLASRAKHAVVSGAFRRVGTTYAQLIAALAAANSLGDNSTDLSFSFLSSFQSNLLTGGLRLQVGWGHVWNRFAGPLSCHHQSHQCAFTPLLPPAWWDGLWESPIPRDINRLAAFGVHLSGFGTVDENRL*****************
************VQTMLVVFVICSAGVGLLMTMTMLI*****************************************************CATVEEMGEDFKGSIQEESLKVRKLIQRHFDLNGASRVRNLPPEQFCKHGFVLGKASEAGFGNEMYKILTGAALSVMLNRSLIIGQTRGKYPFGEYISYSNVSFTLEEVKHLWRRNGCLKKYGRHLVMRIDDFEKPPQTNVLCSNWRKWEQPIIWFQGTTDAVAAQFFLKNVHPEMRNAANDLFGHPESLHAQPNVFGELMRVLISPSEDVEEAVKWVLGNGVDPDISLHMRMLTNRSVRAVQAAVKCIRKVV*******R**TVIVSDTPSFAKTITPNISEFAEVLYFDYKAFRGNI********SLEFRAKDWGPAPRWVAFVDFFLASRAKHAVVSGAFRRVGTTYAQLIAALAAANS*********FSFLSSFQSNLLTGGLRLQVGWGHVWNRFAGPLSCHHQSHQCAFTPLLPPAWWDGLWESPIPRDINRLAAFGVHLSGFGTVDENRLQSFCSSKKNSV*TSLII
**********LSVQTMLVVFVICSAGVGLLMTMTMLIVRPLDTPPNTSADVFLPVENDVDS**************************PKRCATVEEMGEDFKGSIQEESLKVRKLIQRHFDLNGASRVRNLPPEQFCKHGFVLGKASEAGFGNEMYKILTGAALSVMLNRSLIIGQTRGKYPFGEYISYSNVSFTLEEVKHLWRRNGCLKKYGRHLVMRIDDFEKPPQTNVLCSNWRKWEQPIIWFQGTTDAVAAQFFLKNVHPEMRNAANDLFGHPESLHAQPNVFGELMRVLISPSEDVEEAVKWVLGNGVDPDISLHMRMLTNRSVRAVQAAVKCIRKVVNSLNLTSRPKTVIVSDTPSFAKTITPNISEFAEVLYFDYKAFRGNISHDVNRLPSLEFRAKDWGPAPRWVAFVDFFLASRAKHAVVSGAFRRVGTTYAQLIAALAAANSLGDNSTDLSFSFLSSFQSNLLTGGLRLQVGWGHVWNRFAGPLSCHHQSHQCAFTPLLPPAWWDGLWESPIPRDINRLAAFGVHLSGFGTVDENRLQSFC*************
********RRLSVQTMLVVFVICSAGVGLLMTMTMLIVRPLDTPPNTSADV*L************************************RC***EE*GEDFKGSIQEESLKVRKLIQRHFDLNGASRVRNLPPEQFCKHGFVLGKASEAGFGNEMYKILTGAALSVMLNRSLIIGQTRGKYPFGEYISYSNVSFTLEEVKHLWRRNGCLKKYGRHLVMRIDDFEKPPQTNVLCSNWRKWEQPIIWFQGTTDAVAAQFFLKNVHPEMRNAANDLFGHPESLHAQPNVFGELMRVLISPSEDVEEAVKWVLGNGVDPDISLHMRMLTNRSVRAVQAAVKCIRKVVNSLNLTSRPKTVIVSDTPSFAKTITPNISEFAEVLYFDYKAFRGNISHDVNRLPSLEFRAKDWGPAPRWVAFVDFFLASRAKHAVVSGAFRRVGTTYAQLIAALAAANSLGDNSTDLSFSFLSSFQSNLLTGGLRLQVGWGHVWNRFAGPLSCHHQSHQCAFTPLLPPAWWDGLWESPIPRDINRLAAFGVHLSGFGTVDENRLQSFCSSKKNSVKTSLII
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKHGGSRRRRLSVQTMLVVFVICSAGVGLLMTMTMLIVRPLDTPPNTSADVFLPVENDVDSSQLLEETETETESESESETKTSTVSNPKRCATVEEMGEDFKGSIQEESLKVRKLIQRHFDLNGASRVRNLPPEQFCKHGFVLGKASEAGFGNEMYKILTGAALSVMLNRSLIIGQTRGKYPFGEYISYSNVSFTLEEVKHLWRRNGCLKKYGRHLVMRIDDFEKPPQTNVLCSNWRKWEQPIIWFQGTTDAVAAQFFLKNVHPEMRNAANDLFGHPESLHAQPNVFGELMRVLISPSEDVEEAVKWVLGNGVDPDISLHMRMLTNRSVRAVQAAVKCIRKVVNSLNLTSRPKTVIVSDTPSFAKTITPNISEFAEVLYFDYKAFRGNISHDVNRLPSLEFRAKDWGPAPRWVAFVDFFLASRAKHAVVSGAFRRVGTTYAQLIAALAAANSLGDNSTDLSFSFLSSFQSNLLTGGLRLQVGWGHVWNRFAGPLSCHHQSHQCAFTPLLPPAWWDGLWESPIPRDINRLAAFGVHLSGFGTVDENRLQSFCSSKKNSVKTSLII
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query564
356560458538 PREDICTED: uncharacterized protein LOC10 0.943 0.988 0.672 0.0
255543661609 conserved hypothetical protein [Ricinus 0.953 0.883 0.688 0.0
449479964546 PREDICTED: uncharacterized protein LOC10 0.953 0.985 0.628 0.0
42565229548 uncharacterized protein [Arabidopsis tha 0.971 1.0 0.634 0.0
62320093548 hypothetical protein [Arabidopsis thalia 0.969 0.998 0.634 0.0
225451525506 PREDICTED: uncharacterized protein LOC10 0.854 0.952 0.741 0.0
297818250548 hypothetical protein ARALYDRAFT_904902 [ 0.971 1.0 0.629 0.0
296082310519 unnamed protein product [Vitis vinifera] 0.854 0.928 0.721 0.0
356561287554 PREDICTED: uncharacterized protein LOC10 0.966 0.983 0.618 0.0
359491573605 PREDICTED: uncharacterized protein LOC10 0.992 0.925 0.635 0.0
>gi|356560458|ref|XP_003548509.1| PREDICTED: uncharacterized protein LOC100807268 [Glycine max] Back     alignment and taxonomy information
 Score =  759 bits (1959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/561 (67%), Positives = 453/561 (80%), Gaps = 29/561 (5%)

Query: 1   MKHGGSRRRRLSVQTMLVVFVICSAGVGLLMTMTMLIVRPLDTPPNTSADVFLPVENDVD 60
           M++GG R+RR+ +Q  LV   +C+   GL   + ML +RPLD PP T           VD
Sbjct: 1   MRYGGGRKRRMLLQPFLV---LCATVTGL--GLFMLALRPLD-PPIT-----------VD 43

Query: 61  SSQLLEETETETESESESETKTSTVSNPKRCATVEEMGEDFK-GSIQEESLKVRKLIQRH 119
             + +E  ++ + S +    K         CA VEEMG+DF+ G + +E+L+VR++I+ H
Sbjct: 44  FPKKIELGDSNSSSLNGGGEKP--------CAAVEEMGKDFEAGVVGKETLRVRRIIEDH 95

Query: 120 FDLNGASRVRNLPPEQFCKHGFVLGKASEAGFGNEMYKILTGAALSVMLNRSLIIGQTRG 179
           FDLNGASR+R+LPPEQFC HGFVLGK +EAGFGNEMYK+LT AALS+MLNRSLIIGQTRG
Sbjct: 96  FDLNGASRIRDLPPEQFCSHGFVLGKTAEAGFGNEMYKVLTAAALSIMLNRSLIIGQTRG 155

Query: 180 KYPFGEYISYSNVSFTLEEVKHLWRRNGCLKKYGRHLVMRIDDFEKPPQTNVLCSNWRKW 239
           KYPFG+YISYSN +FT+ E+KHLWR+N C  KYGR LVMR DDFEKP QTNVLCSNW++W
Sbjct: 156 KYPFGDYISYSNFTFTMNEIKHLWRQNLCESKYGRQLVMRTDDFEKPAQTNVLCSNWKEW 215

Query: 240 EQPIIWFQGTTDAVAAQFFLKNVHPEMRNAANDLFGHPESLHAQPNVFGELMRVLISPSE 299
           +QPIIWFQGTTDAVAAQFFLKN+H +MR AA DLFG P+ L +QPNVFGEL+RVLISPS+
Sbjct: 216 KQPIIWFQGTTDAVAAQFFLKNIHSQMRIAAFDLFGDPQVLGSQPNVFGELLRVLISPSK 275

Query: 300 DVEEAVKWVLGNGVDPDISLHMRMLTNRSVRAVQAAVKCIRKVVNSLNLTSRPKTVIVSD 359
           DVE AV WV+G   +PDISLHMRML NRS+RAVQAA+ CI+KV+ S +LTSRPK V+VSD
Sbjct: 276 DVEAAVNWVIGGEENPDISLHMRMLMNRSIRAVQAALHCIKKVIESQHLTSRPKVVVVSD 335

Query: 360 TPSFAKTITPNISEFAEVLYFDYKAFRGNISHDVNRLPSLEFRAKDWGPAPRWVAFVDFF 419
           TPS  K+I PNISEFA+VLYFDY+ F+GNI      LP L+FR KDWGPAPRWVAFVDFF
Sbjct: 336 TPSLVKSIMPNISEFAQVLYFDYEKFKGNIFEG---LPKLDFRVKDWGPAPRWVAFVDFF 392

Query: 420 LASRAKHAVVSGAFRRVGTTYAQLIAALAAANSLGDNSTDLSFSFLSSFQSNLLTGGLRL 479
           LASRAK+AVVSGA RRVGTTYAQLIAALAA  +LGDNS+  SFSFLSSFQS +LT GL+ 
Sbjct: 393 LASRAKYAVVSGAHRRVGTTYAQLIAALAATRNLGDNSSSSSFSFLSSFQSTMLTEGLKN 452

Query: 480 QVGWGHVWNRFAGPLSCHHQSHQCAFTPLLPPAWWDGLWESPIPRDINRLAAFGVHLSGF 539
           QVGWGHVWNR+AGPLSCH+Q++QCAFTPLLPP WWDGLW+SPIP+DI+RLAA+G+ LSG 
Sbjct: 453 QVGWGHVWNRYAGPLSCHNQTNQCAFTPLLPPGWWDGLWQSPIPKDISRLAAYGIKLSGL 512

Query: 540 GTVDENRLQSFCSSKKNSVKT 560
           GTVD + LQ++CS++KN  +T
Sbjct: 513 GTVDYDSLQNYCSTRKNVERT 533




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255543661|ref|XP_002512893.1| conserved hypothetical protein [Ricinus communis] gi|223547904|gb|EEF49396.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|449479964|ref|XP_004155761.1| PREDICTED: uncharacterized protein LOC101223762 [Cucumis sativus] Back     alignment and taxonomy information
>gi|42565229|ref|NP_189331.2| uncharacterized protein [Arabidopsis thaliana] gi|34365753|gb|AAQ65188.1| At3g26950 [Arabidopsis thaliana] gi|51970678|dbj|BAD44031.1| unknown protein [Arabidopsis thaliana] gi|62319798|dbj|BAD93806.1| hypothetical protein [Arabidopsis thaliana] gi|332643728|gb|AEE77249.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|62320093|dbj|BAD94266.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225451525|ref|XP_002274990.1| PREDICTED: uncharacterized protein LOC100265179 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297818250|ref|XP_002877008.1| hypothetical protein ARALYDRAFT_904902 [Arabidopsis lyrata subsp. lyrata] gi|297322846|gb|EFH53267.1| hypothetical protein ARALYDRAFT_904902 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|296082310|emb|CBI21315.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356561287|ref|XP_003548914.1| PREDICTED: uncharacterized protein LOC100775912 [Glycine max] Back     alignment and taxonomy information
>gi|359491573|ref|XP_002280586.2| PREDICTED: uncharacterized protein LOC100267986 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query564
TAIR|locus:2092050548 AT3G26950 "AT3G26950" [Arabido 0.971 1.0 0.597 1.9e-179
TAIR|locus:2092050 AT3G26950 "AT3G26950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1742 (618.3 bits), Expect = 1.9e-179, P = 1.9e-179
 Identities = 337/564 (59%), Positives = 406/564 (71%)

Query:     1 MKHGGSRRRRLSVQTMLVVFVICSAGVGLLMTMTMLIVRPLDTPPNTSADVFLPVENDVD 60
             MK GG+RR+RL  +T+L+  V+   G GLL+    L +R +D  PN+S   F  +++D D
Sbjct:     1 MKRGGTRRKRLFGKTILLSSVVFFIGFGLLL----LTLRSVD--PNSS---F--IDDDDD 49

Query:    61 SSQLLXXXXXXXXXXXXXXXXXXXVSNPKRCATVEEMGEDFKGSIQEESLKVRKLIQRHF 120
              S+                     V   K CATVEEMG +F G   ++SL+VR +I RHF
Sbjct:    50 ESE----SEEASRWSNSSSIGEAMVDGAKLCATVEEMGSEFDGGFVDQSLRVRDVIHRHF 105

Query:   121 DLNGASRVRNLPPEQFCKHGFVLGKASEAGFGNEMYKILTGAALSVMLNRSLIIGQTRGK 180
              +NGAS +R LPPEQFC+HG+VLGK +EAGFGNEMYKILT AALS+MLNRSLIIGQTRGK
Sbjct:   106 QINGASAIRELPPEQFCRHGYVLGKTAEAGFGNEMYKILTSAALSIMLNRSLIIGQTRGK 165

Query:   181 YPFGEYISYSNVSFTLEEVKHLWRRNGCLKKYGRHLVMRIDDFEKPPQTNVLCSNWRKWE 240
             YPFG+YI+YSN +FT+ EVKHLWR+NGC+KKY R LVMR+DDFEKP ++NVLCSNW+KWE
Sbjct:   166 YPFGDYIAYSNATFTMSEVKHLWRQNGCVKKYKRRLVMRLDDFEKPAKSNVLCSNWKKWE 225

Query:   241 QPIIWFQGTTDAVAAQFFLKNVHPEMRNAANDLFGHPESLHAQPNVFGELMRVLISPSED 300
             + IIWFQGTTDAVAAQFFLKNVHPEMR AA +LFG   +   + NVFGELM  LISP++D
Sbjct:   226 EAIIWFQGTTDAVAAQFFLKNVHPEMRAAAFELFGEQGNSAPRGNVFGELMMSLISPTKD 285

Query:   301 VEEAVKWVLGNGVDPDISLHMRMLTNRSVRAVQAAVKCIRKVVNSLNLTSRPKTVIVSDT 360
             V+EAV WVL    DPDIS+HMRML ++SVR ++AA+ C+ K +N L + + P+ VIVSDT
Sbjct:   286 VKEAVDWVLHETGDPDISVHMRMLMSKSVRPMRAAINCLGKAINRLGIPN-PRVVIVSDT 344

Query:   361 PSFAKTITPNISEFAEVLYFDYKAFRGNISHDVNRLPSLEFRAKDWGPAPRWVAFVDFFL 420
             PS  K I  NIS  AEVL+FDYK FRG+I+     LP L+FR KDWGPAPRWVAFVDFFL
Sbjct:   345 PSVVKIIKTNISTIAEVLHFDYKLFRGDIAQRGRGLPMLDFRIKDWGPAPRWVAFVDFFL 404

Query:   421 ASRAKHAVVSGAFRRVGTTYXXXXXXXXXXNSLGXXXXXXXXXXXXXXXXXXXXGGLRLQ 480
             A RAKHAV+SGA RRVGTTY          NSL                      GL+ Q
Sbjct:   405 ACRAKHAVISGANRRVGTTYAQLVAALAAANSLKDGSSNSSFAFLSSFQSNLLADGLKNQ 464

Query:   481 VGWGHVWNRFAGPLSCHHQSHQCAFTPLLPPAWWDGLWESPIPRDINRLAAFGVHLSGFG 540
             VGWGHVWNR+AGPLSC  Q +QCAFTPL PP WWDG+W+SPIPRD  RLAAFG+ LSGFG
Sbjct:   465 VGWGHVWNRYAGPLSCPKQPNQCAFTPLAPPGWWDGIWQSPIPRDTRRLAAFGIELSGFG 524

Query:   541 TVDENRLQSFCSSKKNSVKTSLII 564
             TV+E+R  ++CS+KK  V T  II
Sbjct:   525 TVNEDRFHAYCSAKKEYVSTVTII 548


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.136   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      564       515   0.00088  119 3  11 22  0.36    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  325 KB (2164 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  38.65u 0.14s 38.79t   Elapsed:  00:00:01
  Total cpu time:  38.65u 0.14s 38.79t   Elapsed:  00:00:01
  Start:  Thu May  9 18:29:23 2013   End:  Thu May  9 18:29:24 2013


GO:0003674 "molecular_function" evidence=ND
GO:0005739 "mitochondrion" evidence=ISM
GO:0008150 "biological_process" evidence=ND

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
AT3G26950
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 14 growth stages; Has 17 Blast hits to 17 proteins in 4 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink). (548 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 564
PF10250351 O-FucT: GDP-fucose protein O-fucosyltransferase; I 97.38
PF01531298 Glyco_transf_11: Glycosyl transferase family 11; I 91.19
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats Back     alignment and domain information
Probab=97.38  E-value=0.00017  Score=69.56  Aligned_cols=261  Identities=22%  Similarity=0.278  Sum_probs=115.8

Q ss_pred             CcchhHHHHHHHHHHHHhhccceeeecccCCCCCCcc-----------eeeecceeeHHHHHHHHHHhCchhhcCCceee
Q 008470          150 GFGNEMYKILTGAALSVMLNRSLIIGQTRGKYPFGEY-----------ISYSNVSFTLEEVKHLWRRNGCLKKYGRHLVM  218 (564)
Q Consensus       150 GFGNeMYKiLTaAaLsiMLNRSLIIgqtrg~yPFGdY-----------Isysn~sFT~~EvKHLWr~~~C~~kYgR~L~m  218 (564)
                      ||+|-+-=+..|++++.+|||.||+      |||...           |.|++ -|.++.+          .+|-++ ++
T Consensus         9 GfnNQr~~~~~a~~~A~~LnRTLVL------Pp~~~~~~~~~~~~~~~ipf~~-~fD~~~l----------~~~~~~-vi   70 (351)
T PF10250_consen    9 GFNNQRMGFENAVVFAKALNRTLVL------PPFIKHYHWKDQSKQRHIPFSD-FFDVEHL----------RKFLRP-VI   70 (351)
T ss_dssp             SHHHHHHHHHHHHHHHHHHT-EEE--------EEEEESSSS----EEEEEHHH-HB-HHHH----------TTTS---EE
T ss_pred             CHHHHHHHHHHHHHHHHHhCCEEEc------CCccccccccccccccccChhh-hccHHHH----------HHHhhC-ce
Confidence            9999999999999999999999998      444431           22333 4555443          222221 45


Q ss_pred             eeccCCC---CCC-------ccccccCccc---cccceEEeccCcc--------hHHhHHHhhccCHHHHHH------HH
Q 008470          219 RIDDFEK---PPQ-------TNVLCSNWRK---WEQPIIWFQGTTD--------AVAAQFFLKNVHPEMRNA------AN  271 (564)
Q Consensus       219 R~Ddfek---P~~-------TNvLCsdW~~---w~qpIIWF~GTtD--------aVa~QffLKNvhp~Mr~A------A~  271 (564)
                      .+.+|..   +..       ...-|.+|.+   =..|.-||.+...        .....+.+++++|..+.-      -.
T Consensus        71 ~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (351)
T PF10250_consen   71 TMEEFLPKHWDEVFRLQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPV  150 (351)
T ss_dssp             -HHHHHHHHS-GGG-EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SE
T ss_pred             ehheeccchhccccchhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhcccccccc
Confidence            5555531   111       1122333332   1112222222211        122334567777777664      23


Q ss_pred             hhcCCCCCCCCCCchHHHhHHHhcCCchhHHHHHhhhh---cCCCCCCceehhhhhccc--------------chH----
Q 008470          272 DLFGHPESLHAQPNVFGELMRVLISPSEDVEEAVKWVL---GNGVDPDISLHMRMLTNR--------------SVR----  330 (564)
Q Consensus       272 ~LfG~p~~l~sRpN~FGELmr~~ISPs~dV~~AV~W~l---~gg~~PDIslHmRMl~nR--------------s~r----  330 (564)
                      ..|.....+-. -+..+.-++..+-++++|+++++=.+   ..+..|=|++|+|.-..=              +.|    
T Consensus       151 i~~~~~~~~~~-~~~~~~~~~r~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~~~~C~~~~~~~~~~~~~~~~~  229 (351)
T PF10250_consen  151 IAFTGFESRLP-DNYLDRDLQRYLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDWFSACEFKGERHLLASPRCWGK  229 (351)
T ss_dssp             EEESS-SS-SS---GGGGGGGGG--B-HHHHHHHHHHHHHH----SSEEEEEE--SHHHHHHHCT-T----TTTHHHH-G
T ss_pred             ceeccccccch-hcccCccceEEEecCHHHHHHHHHHHHHhhcccCceEEEeecccCchHhhcccCCchHHHHHhHhhcc
Confidence            33333322221 12334444668888888887764322   234689999999986110              000    


Q ss_pred             ---------------HHHHHHHHHHHHHHhcccCCCCeEEEEeCChh-hhhhhccchhhhhhhheecHHhhhccccccCC
Q 008470          331 ---------------AVQAAVKCIRKVVNSLNLTSRPKTVIVSDTPS-FAKTITPNISEFAEVLYFDYKAFRGNISHDVN  394 (564)
Q Consensus       331 ---------------A~~AA~~Ci~k~~~~~hl~~rPrVvvVSDTPs-~vk~i~~~i~efaeVl~FDYk~f~~~~~~~~~  394 (564)
                                     ...-...+|++++...   ....|-|-||-.. -.+.+.+-.+.|..+.   .+..... .   .
T Consensus       230 ~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~---~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~---~~~~~~~-~---~  299 (351)
T PF10250_consen  230 KSINPEKKRRNGCCPSTPQEAKQILRALGKN---NTTVVYIATDEIYGGERRLDPLKNMFPNVV---TKDDLLS-H---E  299 (351)
T ss_dssp             GGTT-----HHHHS--HHHHHHHHHHHHHHH---T-SEEEEEESS-----------HHHHHHHH---GGGT--E-E----
T ss_pred             ccccchhhhhcCCCCChHHHHHHHHHHhccC---CCCEEEEecCcccccchhHHHHHHHhhhhE---eccccCC-H---H
Confidence                           1122345555555443   4457788888732 1233344444444444   1111111 1   1


Q ss_pred             CCCCccccccccCCCCchhHHHHHHHhccccceeeecccccccccHHHHHHHHHHhhhc
Q 008470          395 RLPSLEFRAKDWGPAPRWVAFVDFFLASRAKHAVVSGAFRRVGTTYAQLIAALAAANSL  453 (564)
Q Consensus       395 ~~~~ldfR~rDWG~aPRWVAfVDFFLAsrAk~aVVSGAhrRVgTTYAQLiAALAAAn~l  453 (564)
                      .+..++    +     ..+|+||+-++++|.+-|=|.     +-|+...|+..=-++..
T Consensus       300 ~~~~~~----~-----~~~a~vD~~i~~~s~~Figt~-----~Stfs~~i~~~R~~~g~  344 (351)
T PF10250_consen  300 ELEPLN----D-----DQLAMVDQEICSRSDVFIGTC-----GSTFSSNIARERHYRGK  344 (351)
T ss_dssp             -S--------------S--HHHHHHHHHHSSEEEE-T-----T-HHHHHHHHHHHHSSS
T ss_pred             Hhhhcc----c-----cchhHHHHHHHhcCCEEEecC-----cchhHHHhhcccCcCCC
Confidence            112221    1     679999999999999988665     56787777765555444



Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query564
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-07
2de0_X526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 2e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 52.9 bits (126), Expect = 2e-07
 Identities = 84/513 (16%), Positives = 159/513 (30%), Gaps = 143/513 (27%)

Query: 7   RRRRLSVQTMLVVFVICSAGVG--LLMTMTMLIVRPLDTPPNTSADVF-LPVENDVDSSQ 63
           R+  L ++    V +    G G   +     L  +           +F L ++N      
Sbjct: 141 RQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF---KIFWLNLKNCNSPET 197

Query: 64  LLEETET-ETESESESETKTSTVSNPKRCATVEEMGEDFKGSIQEESLKVRKLIQRH--- 119
           +LE  +    + +    +++   SN K    +  +  + +  ++ +  +   L+  +   
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKL--RIHSIQAELRRLLKSKPYENCLLVLLNVQN 255

Query: 120 ------FDLNGASRVRNLPPEQFCKHGFVLGKASEAGFGNEMYKILTGAALSVMLNRSLI 173
                 F+L+             CK   +L              + T         + + 
Sbjct: 256 AKAWNAFNLS-------------CK---IL--------------LTTR-------FKQVT 278

Query: 174 --IGQTRGKYPFGEYISYSNVSFTLEEVKHLWRRNGCLKKYGRHLVMRIDDFEKPPQ--- 228
             +      +   ++ S   ++ T +EVK L      L KY   L  R  D   P +   
Sbjct: 279 DFLSAATTTHISLDHHS---MTLTPDEVKSL------LLKY---LDCRPQDL--PREVLT 324

Query: 229 TNVL--------CSNWR-KWEQPIIWFQGTTDAVAA--QFFLKNVHP-EMRNAANDLFGH 276
           TN            +    W+    W     D +    +  L  + P E R   + L   
Sbjct: 325 TNPRRLSIIAESIRDGLATWDN---WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF 381

Query: 277 PESLHAQPNVFGELMRV-LISPSEDVEEAVKW------VLGNGVDPDISLHMRMLTNRSV 329
           P S H    +   L  +       DV   V        V     +  IS+    L  +  
Sbjct: 382 PPSAHIPTIL---LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK 438

Query: 330 RAVQAAVKCIRKVVNSLNLTSRPKTVIVSDTPS------FAKTI---------TPNISEF 374
              + A+   R +V+  N+   PKT    D         F   I            ++ F
Sbjct: 439 LENEYALH--RSIVDHYNI---PKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF 493

Query: 375 AEVLYFDYKAFRGNISHD----------VNRLPSLEFRAK---DWGPAP-RWV-AFVDFF 419
             +++ D++     I HD          +N L  L+F      D  P   R V A +DF 
Sbjct: 494 -RMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFL 552

Query: 420 LASRAKHAVVSGAFRRVGTTYAQLIAALAAANS 452
              + +  ++   +  +     ++  AL A + 
Sbjct: 553 P--KIEENLICSKYTDL----LRI--ALMAEDE 577


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Length = 526 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query564
2de0_X526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 98.32
2hhc_A330 NODZ, nodulation fucosyltransferase NODZ; glycosyl 97.76
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 96.02
4ap5_A408 GDP-fucose protein O-fucosyltransferase 2; GT-B, G 95.3
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Back     alignment and structure
Probab=98.32  E-value=1.1e-05  Score=84.17  Aligned_cols=290  Identities=15%  Similarity=0.250  Sum_probs=158.9

Q ss_pred             hHHHhhhhccccc--chhhhHHHHHHHHHHHhccccccccCCchhhccc-ccccccc-cccCcchhHHHHHHHHHHHHhh
Q 008470           93 TVEEMGEDFKGSI--QEESLKVRKLIQRHFDLNGASRVRNLPPEQFCKH-GFVLGKA-SEAGFGNEMYKILTGAALSVML  168 (564)
Q Consensus        93 tvEeMGe~~~g~~--~~~sLRvR~~I~~hf~l~GA~rVR~LP~~eFC~~-gFVlGka-sEaGFGNeMYKiLTaAaLsiML  168 (564)
                      ..|.|++......  .++.+.+.+++|+.+..|=      -|+  -|.. .|++=+- ...|||+.|.-++.+..+|+.+
T Consensus       104 ~~~~l~~~~g~~~~r~~~~~~lt~~vq~~i~~~Q------nP~--~Cs~aK~Lv~~~~~~~GfGs~lh~l~~~L~~A~~~  175 (526)
T 2de0_X          104 DLYYLSQTDGAGDWREKEAKDLTELVQRRITYLQ------NPK--DCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGT  175 (526)
T ss_dssp             HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHH------CCS--CGGGSCEEEEECCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHhc------CCC--cCCCCCEEEEEecCCCchHHHHHHHHHHHHHHHhh
Confidence            4567777665444  2677777777777655442      122  4554 5665554 5799999999999999999999


Q ss_pred             ccceeeecccCCCCCCcceeeecceeeHHHHHHHHHHhCchhhcCCceeeeeccCCCCCCccccccCccccccceEEecc
Q 008470          169 NRSLIIGQTRGKYPFGEYISYSNVSFTLEEVKHLWRRNGCLKKYGRHLVMRIDDFEKPPQTNVLCSNWRKWEQPIIWFQG  248 (564)
Q Consensus       169 NRSLIIgqtrg~yPFGdYIsysn~sFT~~EvKHLWr~~~C~~kYgR~L~mR~DdfekP~~TNvLCsdW~~w~qpIIWF~G  248 (564)
                      ||.|||-.+...|.-|.|                                 .|-|+.|+++   |.+ ..=++++.|=.+
T Consensus       176 ~Rtliidd~~w~Y~~g~w---------------------------------~~yF~P~s~~---C~~-~~~~~~~~w~~~  218 (526)
T 2de0_X          176 QRTLILESQNWRYATGGW---------------------------------ETVFRPVSET---CTD-RSGISTGHWSGE  218 (526)
T ss_dssp             TCEEEEECTTCSSCTTCG---------------------------------GGTBCCSCSS---CCC-CCCSCCCBCCCT
T ss_pred             CCEEEEECCCCCcCCCCH---------------------------------HHhhhCcCcc---ccC-CCccccCCCCCc
Confidence            999999887766532332                                 2233333321   222 000122222111


Q ss_pred             Ccc----hHHhHHHhhccCH-----------HHHHHHHhhcCCCCCCCCCCchHHHhHHHhcCCchhHHHHHhhhhcC--
Q 008470          249 TTD----AVAAQFFLKNVHP-----------EMRNAANDLFGHPESLHAQPNVFGELMRVLISPSEDVEEAVKWVLGN--  311 (564)
Q Consensus       249 TtD----aVa~QffLKNvhp-----------~Mr~AA~~LfG~p~~l~sRpN~FGELmr~~ISPs~dV~~AV~W~l~g--  311 (564)
                      ..|    .|-.- .+++.|+           ++-.+-..+-|+|     +==.+|++||-|+.|++.|++.|+=....  
T Consensus       219 ~~~~~~~vV~~~-~i~~~~~~~~~~~~~~P~~~~~~L~~l~~dp-----~~w~~~q~~~yl~rP~~~i~~~I~~~~~~l~  292 (526)
T 2de0_X          219 VKDKNVQVVELP-IVDSLHPRPPYLPLAVPEDLADRLVRVHGDP-----AVWWVSQFVKYLIRPQPWLEKEIEEATKKLG  292 (526)
T ss_dssp             TGGGGCSEEEEC-CGGGCSSCCSCCTTCEEGGGHHHHHHHCSCH-----HHHHHHHHHHHHTCBCHHHHHHHHHHHHHHT
T ss_pred             ccCCCcceEEee-ccccccccccccccccchhHHHHHHhccCCc-----HHHHHHHHHHHHcCCCHHHHHHHHHHHHHhC
Confidence            000    00000 0011111           0111111111111     01247899999999999999999887742  


Q ss_pred             CCCCCceehhhhhcccc----hHHHHHHHHHHHHHHHhc---ccCCCCeEEEEeCChhhhhhhccchhhhhhhheecHHh
Q 008470          312 GVDPDISLHMRMLTNRS----VRAVQAAVKCIRKVVNSL---NLTSRPKTVIVSDTPSFAKTITPNISEFAEVLYFDYKA  384 (564)
Q Consensus       312 g~~PDIslHmRMl~nRs----~rA~~AA~~Ci~k~~~~~---hl~~rPrVvvVSDTPs~vk~i~~~i~efaeVl~FDYk~  384 (564)
                      -..|=|.+|.|.=-.-.    .-....-...+...++.+   .....++|.|-||.|.++++++..-.        ||..
T Consensus       293 ~~~piVGVHIRrGDk~~~E~~~~~~~~Y~~~v~~~~~~l~~~~~~~~~~ifLATDDp~v~~e~k~~~p--------~~~~  364 (526)
T 2de0_X          293 FKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTKYP--------NYEF  364 (526)
T ss_dssp             CCSSEEEEEECCC-----CCCSCSHHHHHHHHHHHHHHHHTTSCCSSCEEEEEESCHHHHHHHHHHCT--------TSEE
T ss_pred             CCCCEEEEEEeCCCCCccccccCCHHHHHHHHHHHHHHHHhhcCCCCCeEEEEcCCHHHHHHHHHhCC--------CCEE
Confidence            36788999999653311    112222233334333322   23467899999999999998864222        2221


Q ss_pred             hhccccccCCCCCCccccccccCCCCchhHHHHHHHhccccceeeecccccccccHHHHHHHHHHhhh
Q 008470          385 FRGNISHDVNRLPSLEFRAKDWGPAPRWVAFVDFFLASRAKHAVVSGAFRRVGTTYAQLIAALAAANS  452 (564)
Q Consensus       385 f~~~~~~~~~~~~~ldfR~rDWG~aPRWVAfVDFFLAsrAk~aVVSGAhrRVgTTYAQLiAALAAAn~  452 (564)
                      + ++.  .+.-...+.-|.   ...--=-+++|.+|+|+++|.|.|-.     .|+..|++.|...+.
T Consensus       365 ~-~d~--~~~~~a~~~~R~---s~~~l~~~l~DL~lLs~cd~~Vgt~s-----S~~srla~~l~~~~~  421 (526)
T 2de0_X          365 I-SDN--SISWSAGLHNRY---TENSLRGVILDIHFLSQADFLVCTFS-----SQVCRVAYEIMQTLH  421 (526)
T ss_dssp             E-CCC--CSSCSSGGGGGT---CCTHHHHHHHHHHHHHHSSEEEECTT-----SHHHHHHHHHHTTSS
T ss_pred             e-cCc--ccccccCccccc---cHHHHHHHHHHHHHHhcCCeeecCCC-----CHHHHHHHHHhcCcC
Confidence            1 110  000000111111   00000137999999999999987643     488888888766554



>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Back     alignment and structure
>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Back     alignment and structure
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00