Citrus Sinensis ID: 008476

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560----
MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGNISHLYFVCVCVCVCFLFVLWFP
cEEEEEcccccccccHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHccccccccccccEEEEEccccccccccccHHHHHHHHHHHcccccEEEEEEcccccccccccccccccHHHHHHHHHccccccEEEEcccccccHHHHHHHHcccccccccEEEccccccccHHcHHHHHcccHHHHHHHcccccccccccHHHHHHHHHHHHcccccEEEEEEEEcccccHHHHHHHHHHHHcccccccEEEEEEEEcccccccccccccHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHccccEEEHHHHHHHHHHHHHHHcccccccccccccccccccEEEEcccccccccccccccccccEEEccccHHHHHHHcccccccccccccccccHHHHHHHHHcccEEEEEcccccEEEEEEEccccEEEEcccccccccccccccccHHHHHHHHHHccccccEEEccccccc
cEEEEEEccEEccccHHHHHHHHHHHHHHcccEEEEEEEccEEEccccccccccccEEEEEcccccEcccccccEEEEEEcccccccccccHHHHHHHHHHcccccccccEEEEcccHHHHHHHHHHHHccccccccccccEEEEEEcccccccccHHHHHHHHHHHHHcccccEEEEEEEEcHcHHHcccccccccccHHHHHHHccccccEEEEEccccccHHHHHHHHHHccccHHHEEEccccccHHHcHHHHHHccHHHHHHHHcccccccccccHHHHHHHHHHHHcccccEEEEEEEEEEcccHHHHHHHHHHHHHcccccccEEEEEEEcHHccHccHcccHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHccccEHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEcccccccccccccEEccccccEEcccccHHHHHHcccHHHHHHccccEEccHHHHHHHHHcccEEEEccccccEEEEEEcccccEEEEEEcccccccccccccHHHHHHHHHHHHcccEEEEHEHHEEccc
MKYVLVTggvvsglgkgvtASSIGVLLKACglrvtcikidpylntdagtmspfehgevfvlddggevdldlgnyerFMDIKltrdnnittgkIYQSVIDkerkgdylgktvqvVPHITDEIQDWIERVamipvdgkegpVDVCVIElggtigdiesmPFIEALGQfsyrvgpgnfcLIHVSLVpvlnvvgeqktkptqhsvrglrgqgltpnilacrstvalddnvkgklsqfchvpeqniitlydvpniwhiplllrDQKAHEAIFKVLNlqgttkepllkEWTSRaeicdglhepvRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIdwipacdledatekenpDAYKAAWKLLkgadgilvpggfgnrgvQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLnlrdanstefdpntknpcvifmpegskthmggtmrlgsrrtyfqikdcksaklygnrtfiderhrhryevNPDMIARLENaglsftgkdetsqrmeivelpnhpyfigvqfhpeyksrpgkpsplflgnisHLYFVCVCVCVCflfvlwfp
MKYVLVTGgvvsglgkgvtASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMdikltrdnnittgkiyqsvidkerkgdylgktvqvvphITDEIQDWIERVAMIpvdgkegpVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKtkptqhsvrglrgqgltpnILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLnlqgttkepllKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACdledatekeNPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDAnstefdpntknpcVIFMPEGSKTHMGGTMRLGSRRTYFQikdcksaklygnrtfiderhrhrYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGNISHLYFVCVCVCVCFLFVLWFP
MKYvlvtggvvsglgkgvtASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHgevfvlddggevdldlgNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGNISHLYfvcvcvcvcflfvlWFP
**YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQ********VRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFD*NTKNPCVIFMPE****HMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFT********MEIVELPNHPYFIGVQFHPEYK******SPLFLGNISHLYFVCVCVCVCFLFVLWF*
MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGNISHLYFVCVCVCVCFLFVLWFP
MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQ***********LRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGNISHLYFVCVCVCVCFLFVLWFP
MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKT***QHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGNISHLYFVCVCVCVCFLFVLWFP
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHi
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHi
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SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHi
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MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGNISHLYFVCVCVCVCFLFVLWFP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query564 2.2.26 [Sep-21-2011]
Q54V77569 CTP synthase OS=Dictyoste yes no 0.955 0.947 0.597 0.0
Q1RMS2586 CTP synthase 2 OS=Bos tau yes no 0.959 0.923 0.592 0.0
Q6PEI7591 CTP synthase 1 OS=Danio r yes no 0.959 0.915 0.586 0.0
Q7ZXP9591 CTP synthase 1-B OS=Xenop N/A no 0.959 0.915 0.594 0.0
P70698591 CTP synthase 1 OS=Mus mus yes no 0.957 0.913 0.598 0.0
Q6GME1578 CTP synthase 2 OS=Xenopus N/A no 0.953 0.930 0.588 0.0
Q5XHA8591 CTP synthase 1-A OS=Xenop N/A no 0.959 0.915 0.597 0.0
P17812591 CTP synthase 1 OS=Homo sa yes no 0.957 0.913 0.594 0.0
Q9NRF8586 CTP synthase 2 OS=Homo sa no no 0.959 0.923 0.590 0.0
Q5F3Z1586 CTP synthase 2 OS=Gallus no no 0.959 0.923 0.588 0.0
>sp|Q54V77|PYRG_DICDI CTP synthase OS=Dictyostelium discoideum GN=ctps PE=3 SV=1 Back     alignment and function desciption
 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/559 (59%), Positives = 413/559 (73%), Gaps = 20/559 (3%)

Query: 1   MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFV 60
           MKY++VTGGV+SG+GKG+ ASS  ++LK+ GLRVT IKIDPYLN DAGTMSPFEHGEVFV
Sbjct: 1   MKYIVVTGGVLSGIGKGIIASSTAMILKSMGLRVTSIKIDPYLNIDAGTMSPFEHGEVFV 60

Query: 61  LDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDE 120
           LDDGGEVDLDLGNYERF+D+ L +DNNITTGKIY  VI+KERKG YLGKTVQVVPHIT+E
Sbjct: 61  LDDGGEVDLDLGNYERFLDVNLGKDNNITTGKIYNLVIEKERKGQYLGKTVQVVPHITEE 120

Query: 121 IQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHV 180
           IQ+WIERVA +PVDG +G  DVCVIELGGT+GDIESMPF EAL QF +RVG  NFCL+HV
Sbjct: 121 IQNWIERVAHLPVDGDKGTPDVCVIELGGTVGDIESMPFTEALRQFQFRVGVENFCLMHV 180

Query: 181 SLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240
           SLVPVL VVGEQKTKP+Q S+R LR  GL+P+   CRST  L +  K K+S FCHV   N
Sbjct: 181 SLVPVLGVVGEQKTKPSQQSIRELRSLGLSPDFCLCRSTQPLTEETKKKISLFCHVAPDN 240

Query: 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQ----------GTTKEPLLKEWTSRAEI 290
           +I ++DV NI+ +P+LL  Q     + + L L             +    +  W   A+ 
Sbjct: 241 VIGVHDVSNIYRVPILLNQQNLPNLVLRRLQLNPKVDLSKTSPSESTPYWMASWKGLADR 300

Query: 291 CDGLH----EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATE 346
            D +      P+RIAMVGKYTGL+DAYLS++KAL HAS+ + +K+VIDW+ A +LE  T+
Sbjct: 301 MDKITNESLNPIRIAMVGKYTGLTDAYLSVIKALDHASMAIERKMVIDWVEASNLE--TQ 358

Query: 347 KENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVI 406
             +   YK +W++L+GA GILVPGGFG+RG++G IL A YAR    P+LGICLG+Q+AVI
Sbjct: 359 NSSTAEYKKSWEMLRGAHGILVPGGFGDRGIEGMILTANYARTSGKPFLGICLGLQIAVI 418

Query: 407 EFARSVLNLRDANSTEFDPN-TKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAK 465
           E+AR+V+   +ANS EF  + +    V+FMPE SKTHMGGTMRLGSR T F   D K +K
Sbjct: 419 EYARNVMGWENANSEEFSASGSGKNVVVFMPEVSKTHMGGTMRLGSRDTIFTDVDNKISK 478

Query: 466 LYGNRTF---IDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGV 522
           LY        ++ERHRHRYEVNP+++  +   GL F GKD T  RMEIVEL +H Y++  
Sbjct: 479 LYNVDKVGQAVEERHRHRYEVNPEVVDEIHAKGLHFVGKDTTGVRMEIVELKDHDYYVAC 538

Query: 523 QFHPEYKSRPGKPSPLFLG 541
           QFHPE+KSRP +PSP F+G
Sbjct: 539 QFHPEFKSRPQRPSPPFIG 557
Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
Dictyostelium discoideum (taxid: 44689)
EC: 6EC: .EC: 3EC: .EC: 4EC: .EC: 2
>sp|Q1RMS2|PYRG2_BOVIN CTP synthase 2 OS=Bos taurus GN=CTPS2 PE=2 SV=1 Back     alignment and function description
>sp|Q6PEI7|PYRG1_DANRE CTP synthase 1 OS=Danio rerio GN=ctps1 PE=1 SV=1 Back     alignment and function description
>sp|Q7ZXP9|PYG1B_XENLA CTP synthase 1-B OS=Xenopus laevis GN=ctps1-b PE=2 SV=1 Back     alignment and function description
>sp|P70698|PYRG1_MOUSE CTP synthase 1 OS=Mus musculus GN=Ctps1 PE=1 SV=2 Back     alignment and function description
>sp|Q6GME1|PYRG2_XENLA CTP synthase 2 OS=Xenopus laevis GN=ctps2 PE=2 SV=1 Back     alignment and function description
>sp|Q5XHA8|PYG1A_XENLA CTP synthase 1-A OS=Xenopus laevis GN=ctps1-a PE=2 SV=1 Back     alignment and function description
>sp|P17812|PYRG1_HUMAN CTP synthase 1 OS=Homo sapiens GN=CTPS1 PE=1 SV=2 Back     alignment and function description
>sp|Q9NRF8|PYRG2_HUMAN CTP synthase 2 OS=Homo sapiens GN=CTPS2 PE=1 SV=1 Back     alignment and function description
>sp|Q5F3Z1|PYRG2_CHICK CTP synthase 2 OS=Gallus gallus GN=CTPS2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query564
356526673603 PREDICTED: CTP synthase-like [Glycine ma 0.962 0.900 0.874 0.0
357517335608 CTP synthase like protein [Medicago trun 0.964 0.894 0.863 0.0
225462352595 PREDICTED: CTP synthase [Vitis vinifera] 0.964 0.914 0.867 0.0
356559159601 PREDICTED: CTP synthase-like [Glycine ma 0.962 0.903 0.863 0.0
449433445602 PREDICTED: CTP synthase-like [Cucumis sa 0.964 0.903 0.849 0.0
224057884605 predicted protein [Populus trichocarpa] 0.964 0.899 0.842 0.0
224072427595 predicted protein [Populus trichocarpa] 0.964 0.914 0.869 0.0
449490766569 PREDICTED: CTP synthase-like [Cucumis sa 0.957 0.949 0.851 0.0
297851536600 hypothetical protein ARALYDRAFT_473316 [ 0.964 0.906 0.847 0.0
224109142605 predicted protein [Populus trichocarpa] 0.964 0.899 0.840 0.0
>gi|356526673|ref|XP_003531941.1| PREDICTED: CTP synthase-like [Glycine max] Back     alignment and taxonomy information
 Score =  998 bits (2580), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/543 (87%), Positives = 512/543 (94%)

Query: 1   MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFV 60
           MKYVLVTGGVVSGLGKGVTASSIG+LLKACGLRVT IKIDPYLNTDAGTMSPFEHGEVFV
Sbjct: 1   MKYVLVTGGVVSGLGKGVTASSIGLLLKACGLRVTAIKIDPYLNTDAGTMSPFEHGEVFV 60

Query: 61  LDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDE 120
           LDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKER+GDYLGKTVQVVPHITD 
Sbjct: 61  LDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERRGDYLGKTVQVVPHITDA 120

Query: 121 IQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHV 180
           IQDWIERVA IPVDGK  P DVCVIELGGTIGDIESMPFI+ALGQFSYRVG GNFCL+HV
Sbjct: 121 IQDWIERVAHIPVDGKTSPADVCVIELGGTIGDIESMPFIQALGQFSYRVGAGNFCLVHV 180

Query: 181 SLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240
           SLVPVLNVVGEQKTKPTQHSVR LRGQGLTP+ILACRST+ LD+N KGKLSQFC +P +N
Sbjct: 181 SLVPVLNVVGEQKTKPTQHSVRALRGQGLTPHILACRSTMVLDENAKGKLSQFCLIPAEN 240

Query: 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRI 300
           I+TLYDVPNIWHIPLLLRDQKAHEA+FKVLNL G TKEP L+EWT RAE  D LHEPVRI
Sbjct: 241 IVTLYDVPNIWHIPLLLRDQKAHEAMFKVLNLHGVTKEPNLEEWTCRAESSDLLHEPVRI 300

Query: 301 AMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL 360
           A+VGKYT LSD+YLS+LKALLHASVD +KKLV+DWIPA +LE AT KENPDA+KAAWKLL
Sbjct: 301 ALVGKYTCLSDSYLSVLKALLHASVDCQKKLVVDWIPASNLESATAKENPDAFKAAWKLL 360

Query: 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANS 420
           KGADG+LVPGGFG+RGVQGKI+AAKYARE+RIP+LGICLGMQ+AVIEFARSVL ++DANS
Sbjct: 361 KGADGVLVPGGFGDRGVQGKIIAAKYARENRIPFLGICLGMQIAVIEFARSVLGVQDANS 420

Query: 421 TEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHR 480
           TEF+P+TK+P +IFMPEGSKTHMGGTMRLGSRRTYFQ K+CKSAKLYG ++FIDERHRHR
Sbjct: 421 TEFEPHTKSPYIIFMPEGSKTHMGGTMRLGSRRTYFQTKECKSAKLYGCKSFIDERHRHR 480

Query: 481 YEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFL 540
           YEVNPD++ARLENAGLSFTGKDET QRMEIVELPNHPYFIG QFHPE+KSRPGKPSPLFL
Sbjct: 481 YEVNPDLVARLENAGLSFTGKDETGQRMEIVELPNHPYFIGAQFHPEFKSRPGKPSPLFL 540

Query: 541 GNI 543
           G I
Sbjct: 541 GFI 543

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|357517335|ref|XP_003628956.1| CTP synthase like protein [Medicago truncatula] gi|355522978|gb|AET03432.1| CTP synthase like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|225462352|ref|XP_002265957.1| PREDICTED: CTP synthase [Vitis vinifera] gi|297736081|emb|CBI24119.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356559159|ref|XP_003547868.1| PREDICTED: CTP synthase-like [Glycine max] Back     alignment and taxonomy information
>gi|449433445|ref|XP_004134508.1| PREDICTED: CTP synthase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224057884|ref|XP_002299372.1| predicted protein [Populus trichocarpa] gi|222846630|gb|EEE84177.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224072427|ref|XP_002303728.1| predicted protein [Populus trichocarpa] gi|222841160|gb|EEE78707.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449490766|ref|XP_004158701.1| PREDICTED: CTP synthase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297851536|ref|XP_002893649.1| hypothetical protein ARALYDRAFT_473316 [Arabidopsis lyrata subsp. lyrata] gi|297339491|gb|EFH69908.1| hypothetical protein ARALYDRAFT_473316 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224109142|ref|XP_002315098.1| predicted protein [Populus trichocarpa] gi|222864138|gb|EEF01269.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query564
TAIR|locus:2196984600 AT1G30820 [Arabidopsis thalian 0.964 0.906 0.786 4.4e-235
TAIR|locus:2087765591 emb2742 "embryo defective 2742 0.962 0.918 0.759 1.6e-228
TAIR|locus:2120357597 AT4G20320 [Arabidopsis thalian 0.962 0.909 0.756 2.6e-228
TAIR|locus:2044707597 AT2G34890 [Arabidopsis thalian 0.964 0.911 0.705 3e-211
TAIR|locus:2132208556 AT4G02120 [Arabidopsis thalian 0.962 0.976 0.659 3.9e-195
DICTYBASE|DDB_G0280567569 ctps "CTP synthase" [Dictyoste 0.953 0.945 0.555 2.1e-157
UNIPROTKB|Q1RMS2586 CTPS2 "CTP synthase 2" [Bos ta 0.957 0.921 0.546 7e-157
UNIPROTKB|E2RD29586 CTPS2 "Uncharacterized protein 0.957 0.921 0.548 1.4e-156
UNIPROTKB|A0JNE9591 CTPS "Uncharacterized protein" 0.957 0.913 0.546 1e-155
UNIPROTKB|F1SF78591 CTPS1 "Uncharacterized protein 0.957 0.913 0.548 1.3e-155
TAIR|locus:2196984 AT1G30820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2267 (803.1 bits), Expect = 4.4e-235, P = 4.4e-235
 Identities = 428/544 (78%), Positives = 467/544 (85%)

Query:     1 MKYXXXXXXXXXXXXXXXXASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHXXXXX 60
             MKY                ASSIGVLLKACGLRVT IKIDPYLNTDAGTMSPFEH     
Sbjct:     1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFV 60

Query:    61 XXXXXXXXXXXXNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDE 120
                         NYERF+DIKLTRDNNITTGKIYQ VI KERKGDYLGKTVQVVPH+TD 
Sbjct:    61 LDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQHVIAKERKGDYLGKTVQVVPHVTDA 120

Query:   121 IQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHV 180
             IQDWIERVA+IPVDG+E P DVCVIELGGTIGDIES PFIEALGQFSYRVGPGNFCL+HV
Sbjct:   121 IQDWIERVAVIPVDGEEDPADVCVIELGGTIGDIESAPFIEALGQFSYRVGPGNFCLVHV 180

Query:   181 SLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240
             SLVPVLNVVGEQKTKPTQHSV+GLRG GLTP+ILACRST  L+DNVK KL+QFCHVP + 
Sbjct:   181 SLVPVLNVVGEQKTKPTQHSVKGLRGLGLTPDILACRSTKPLEDNVKEKLAQFCHVPLEY 240

Query:   241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRI 300
             I TLYDVPNIW IPLLL+DQKAH AI KVLNL     EP L EWTSRAE+CD LH PVRI
Sbjct:   241 IFTLYDVPNIWRIPLLLKDQKAHLAISKVLNLASILNEPSLGEWTSRAELCDNLHVPVRI 300

Query:   301 AMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL 360
             A+VGKYTGLSDAYLS+LKALLHASV  RKKLV+DW+PACDLE  TEKENPDAYKAAWKLL
Sbjct:   301 AVVGKYTGLSDAYLSVLKALLHASVACRKKLVVDWVPACDLEKETEKENPDAYKAAWKLL 360

Query:   361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANS 420
             KG DGILVPGGFG+RGV+GKILAAKYARE++IP+LGICLGMQ+AVIEFARSVL+L+DANS
Sbjct:   361 KGVDGILVPGGFGDRGVEGKILAAKYARENKIPFLGICLGMQIAVIEFARSVLSLQDANS 420

Query:   421 TEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHR 480
             TEF+P TK+PC+IFMPEGSKTHMGGTMRLGSR++ F +KD KSAKLY N++F+DERHRHR
Sbjct:   421 TEFNPETKHPCIIFMPEGSKTHMGGTMRLGSRKSIFNVKDSKSAKLYENKSFVDERHRHR 480

Query:   481 YEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFL 540
             YEVNPDM+ RLE AGLSF  KDET +RMEI+ELPNHP+FIG QFHPE+KSRPGK SPLFL
Sbjct:   481 YEVNPDMVERLEKAGLSFAAKDETGKRMEIIELPNHPFFIGAQFHPEFKSRPGKASPLFL 540

Query:   541 GNIS 544
             G I+
Sbjct:   541 GLIA 544
GO:0003883 "CTP synthase activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0006221 "pyrimidine nucleotide biosynthetic process" evidence=IEA
TAIR|locus:2087765 emb2742 "embryo defective 2742" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120357 AT4G20320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2044707 AT2G34890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132208 AT4G02120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0280567 ctps "CTP synthase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q1RMS2 CTPS2 "CTP synthase 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RD29 CTPS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|A0JNE9 CTPS "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SF78 CTPS1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A6LQF6PYRG_CLOB86, ., 3, ., 4, ., 20.49170.92550.9738yesno
C5A7F1PYRG_THEGJ6, ., 3, ., 4, ., 20.53130.91660.9699yesno
Q8TKW5PYRG_METAC6, ., 3, ., 4, ., 20.52850.91660.9681yesno
B6J3W7PYRG_COXB26, ., 3, ., 4, ., 20.48730.91840.9333yesno
Q6L1K7PYRG_PICTO6, ., 3, ., 4, ., 20.52310.90420.9550yesno
A3DGR3PYRG_CLOTH6, ., 3, ., 4, ., 20.50920.92020.9575yesno
A0B7H6PYRG_METTP6, ., 3, ., 4, ., 20.50900.92190.9523yesno
A6UTE4PYRG_META36, ., 3, ., 4, ., 20.51550.93260.9704yesno
Q7ZXP9PYG1B_XENLA6, ., 3, ., 4, ., 20.59400.95920.9153N/Ano
Q24MK9PYRG_DESHY6, ., 3, ., 4, ., 20.48600.91840.9736yesno
P70698PYRG1_MOUSE6, ., 3, ., 4, ., 20.59850.95740.9137yesno
A9N9V5PYRG_COXBR6, ., 3, ., 4, ., 20.48730.91840.9333yesno
A6ZQ59URA8_YEAS76, ., 3, ., 4, ., 20.54300.96090.9377N/Ano
B6YTF0PYRG_THEON6, ., 3, ., 4, ., 20.53130.91660.9699yesno
O59456PYRG_PYRHO6, ., 3, ., 4, ., 20.52390.91660.9627yesno
Q6PEI7PYRG1_DANRE6, ., 3, ., 4, ., 20.58670.95920.9153yesno
Q1RMS2PYRG2_BOVIN6, ., 3, ., 4, ., 20.59220.95920.9232yesno
Q8R720PYRG_THETN6, ., 3, ., 4, ., 20.51940.91840.9646yesno
Q5JGF1PYRG_PYRKO6, ., 3, ., 4, ., 20.53130.91660.9699yesno
Q8Q0L8PYRG_METMA6, ., 3, ., 4, ., 20.52670.91660.9681yesno
Q465Q4PYRG_METBF6, ., 3, ., 4, ., 20.51000.92730.9794yesno
P28274URA7_YEAST6, ., 3, ., 4, ., 20.56470.96090.9360yesno
Q9VUL1PYRG_DROME6, ., 3, ., 4, ., 20.57240.96090.8644yesno
Q12WH5PYRG_METBU6, ., 3, ., 4, ., 20.52400.91480.9662yesno
Q2M197PYRG_DROPS6, ., 3, ., 4, ., 20.57580.95920.8400yesno
Q5XHA8PYG1A_XENLA6, ., 3, ., 4, ., 20.59770.95920.9153N/Ano
Q9V1S2PYRG_PYRAB6, ., 3, ., 4, ., 20.52760.91660.9627yesno
O74638PYRG_GIBZE6, ., 3, ., 4, ., 20.53340.96090.9344yesno
B0CBC7PYRG_ACAM16, ., 3, ., 4, ., 20.48420.92370.9387yesno
Q8TYT7PYRG_METKA6, ., 3, ., 4, ., 20.51100.93080.9813yesno
B6J4W8PYRG_COXB16, ., 3, ., 4, ., 20.48910.91840.9333yesno
Q6GME1PYRG2_XENLA6, ., 3, ., 4, ., 20.58890.95390.9307N/Ano
O42644PYRG_SCHPO6, ., 3, ., 4, ., 20.56550.95390.8966yesno
Q6LYU4PYRG_METMP6, ., 3, ., 4, ., 20.53210.92370.9774yesno
Q54V77PYRG_DICDI6, ., 3, ., 4, ., 20.59740.95560.9472yesno
P17812PYRG1_HUMAN6, ., 3, ., 4, ., 20.59480.95740.9137yesno
O29987PYRG_ARCFU6, ., 3, ., 4, ., 20.50920.91660.9718yesno
A9KDH0PYRG_COXBN6, ., 3, ., 4, ., 20.48910.91840.9333yesno
Q58574PYRG_METJA6, ., 3, ., 4, ., 20.53400.92900.9703yesno
Q8TZY6PYRG_PYRFU6, ., 3, ., 4, ., 20.52940.91310.9590yesno
Q7RZV2PYRG_NEUCR6, ., 3, ., 4, ., 20.53440.94140.9348N/Ano
Q751L7PYRG_ASHGO6, ., 3, ., 4, ., 20.56290.96090.9409yesno
Q6FUD0PYRG_CANGA6, ., 3, ., 4, ., 20.56110.96090.9377yesno
Q83B36PYRG_COXBU6, ., 3, ., 4, ., 20.48730.91840.9333yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.3.40.963
3rd Layer6.3.5.2LOW CONFIDENCE prediction!
3rd Layer6.3.4.20.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query564
PLN02327557 PLN02327, PLN02327, CTP synthase 0.0
PRK05380533 PRK05380, pyrG, CTP synthetase; Validated 0.0
COG0504533 COG0504, PyrG, CTP synthase (UTP-ammonia lyase) [N 0.0
TIGR00337525 TIGR00337, PyrG, CTP synthase 0.0
pfam06418276 pfam06418, CTP_synth_N, CTP synthase N-terminus 0.0
cd03113255 cd03113, CTGs, CTP synthetase (CTPs) is a two-doma 1e-153
cd01746235 cd01746, GATase1_CTP_Synthase, Type 1 glutamine am 1e-140
pfam00117186 pfam00117, GATase, Glutamine amidotransferase clas 8e-45
PRK06186229 PRK06186, PRK06186, hypothetical protein; Validate 2e-37
cd01653115 cd01653, GATase1, Type 1 glutamine amidotransferas 1e-09
cd0312892 cd03128, GAT_1, Type 1 glutamine amidotransferase 2e-08
COG0118204 COG0118, HisH, Glutamine amidotransferase [Amino a 1e-04
PRK13181199 PRK13181, hisH, imidazole glycerol phosphate synth 1e-04
PRK13146209 PRK13146, hisH, imidazole glycerol phosphate synth 3e-04
cd01748198 cd01748, GATase1_IGP_Synthase, Type 1 glutamine am 5e-04
PRK00758184 PRK00758, PRK00758, GMP synthase subunit A; Valida 0.002
PRK13143200 PRK13143, hisH, imidazole glycerol phosphate synth 0.004
>gnl|CDD|215186 PLN02327, PLN02327, CTP synthase Back     alignment and domain information 
 Score = 1219 bits (3157), Expect = 0.0
 Identities = 462/543 (85%), Positives = 499/543 (91%)

Query: 1   MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFV 60
           MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVT IKIDPYLNTDAGTMSPFEHGEVFV
Sbjct: 1   MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFV 60

Query: 61  LDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDE 120
           LDDGGEVDLDLGNYERF+D+ LTRDNNITTGKIYQSVI+KER+GDYLGKTVQVVPHITD 
Sbjct: 61  LDDGGEVDLDLGNYERFLDVTLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDA 120

Query: 121 IQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHV 180
           IQ+WIERVA IPVDGKEGP DVCVIELGGT+GDIESMPFIEAL QFS+RVGPGNFCLIHV
Sbjct: 121 IQEWIERVAKIPVDGKEGPADVCVIELGGTVGDIESMPFIEALRQFSFRVGPGNFCLIHV 180

Query: 181 SLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240
           SLVPVL VVGEQKTKPTQHSVRGLR  GLTP+ILACRST  L++NVK KLSQFCHVP +N
Sbjct: 181 SLVPVLGVVGEQKTKPTQHSVRGLRALGLTPHILACRSTKPLEENVKEKLSQFCHVPAEN 240

Query: 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRI 300
           I+ L+DV NIWH+PLLLRDQKAHEAI KVLNL    +EP L+EWT+RAE CD L EPVRI
Sbjct: 241 ILNLHDVSNIWHVPLLLRDQKAHEAILKVLNLLSVAREPDLEEWTARAESCDNLTEPVRI 300

Query: 301 AMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL 360
           AMVGKYTGLSD+YLS+LKALLHASV   +KLVIDW+ A DLED T KE PDAY AAWKLL
Sbjct: 301 AMVGKYTGLSDSYLSVLKALLHASVACSRKLVIDWVAASDLEDETAKETPDAYAAAWKLL 360

Query: 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANS 420
           KGADGILVPGGFG+RGV+GKILAAKYARE+++PYLGICLGMQ+AVIEFARSVL L+DANS
Sbjct: 361 KGADGILVPGGFGDRGVEGKILAAKYARENKVPYLGICLGMQIAVIEFARSVLGLKDANS 420

Query: 421 TEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHR 480
           TEFDP T NPCVIFMPEGSKTHMGGTMRLGSRRTYFQ  DCKSAKLYGN +F+DERHRHR
Sbjct: 421 TEFDPETPNPCVIFMPEGSKTHMGGTMRLGSRRTYFQTPDCKSAKLYGNVSFVDERHRHR 480

Query: 481 YEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFL 540
           YEVNP+M+ RLE AGLSF GKDET +RMEIVELP+HP+F+GVQFHPE+KSRPGKPSPLFL
Sbjct: 481 YEVNPEMVPRLEKAGLSFVGKDETGRRMEIVELPSHPFFVGVQFHPEFKSRPGKPSPLFL 540

Query: 541 GNI 543
           G I
Sbjct: 541 GLI 543

Length = 557
>gnl|CDD|235437 PRK05380, pyrG, CTP synthetase; Validated Back     alignment and domain information
>gnl|CDD|223578 COG0504, PyrG, CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|232926 TIGR00337, PyrG, CTP synthase Back     alignment and domain information
>gnl|CDD|219017 pfam06418, CTP_synth_N, CTP synthase N-terminus Back     alignment and domain information
>gnl|CDD|239387 cd03113, CTGs, CTP synthetase (CTPs) is a two-domain protein, which consists of an N-terminal synthetase domain and C-terminal glutaminase domain Back     alignment and domain information
>gnl|CDD|153217 cd01746, GATase1_CTP_Synthase, Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase Back     alignment and domain information
>gnl|CDD|215729 pfam00117, GATase, Glutamine amidotransferase class-I Back     alignment and domain information
>gnl|CDD|180452 PRK06186, PRK06186, hypothetical protein; Validated Back     alignment and domain information
>gnl|CDD|153210 cd01653, GATase1, Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>gnl|CDD|153222 cd03128, GAT_1, Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>gnl|CDD|223196 COG0118, HisH, Glutamine amidotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|183878 PRK13181, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>gnl|CDD|237290 PRK13146, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>gnl|CDD|153219 cd01748, GATase1_IGP_Synthase, Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS) Back     alignment and domain information
>gnl|CDD|179112 PRK00758, PRK00758, GMP synthase subunit A; Validated Back     alignment and domain information
>gnl|CDD|237289 PRK13143, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 564
COG0504533 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide 100.0
PLN02327557 CTP synthase 100.0
KOG2387585 consensus CTP synthase (UTP-ammonia lyase) [Nucleo 100.0
PRK05380533 pyrG CTP synthetase; Validated 100.0
TIGR00337525 PyrG CTP synthase. CTP synthase is involved in pyr 100.0
PF06418276 CTP_synth_N: CTP synthase N-terminus; InterPro: IP 100.0
cd03113255 CTGs CTP synthetase (CTPs) is a two-domain protein 100.0
PRK06186229 hypothetical protein; Validated 100.0
COG0505368 CarA Carbamoylphosphate synthase small subunit [Am 100.0
cd01746235 GATase1_CTP_Synthase Type 1 glutamine amidotransfe 100.0
PRK12564360 carbamoyl phosphate synthase small subunit; Review 100.0
TIGR01368358 CPSaseIIsmall carbamoyl-phosphate synthase, small 100.0
PRK12838354 carbamoyl phosphate synthase small subunit; Review 100.0
CHL00197382 carA carbamoyl-phosphate synthase arginine-specifi 100.0
PLN02771415 carbamoyl-phosphate synthase (glutamine-hydrolyzin 100.0
KOG0370 1435 consensus Multifunctional pyrimidine synthesis pro 100.0
PF00117192 GATase: Glutamine amidotransferase class-I; InterP 99.94
COG0118204 HisH Glutamine amidotransferase [Amino acid transp 99.94
cd01744178 GATase1_CPSase Small chain of the glutamine-depend 99.94
COG2071243 Predicted glutamine amidotransferases [General fun 99.93
PLN02335222 anthranilate synthase 99.93
PRK08007187 para-aminobenzoate synthase component II; Provisio 99.93
PRK05670189 anthranilate synthase component II; Provisional 99.92
PRK11366254 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; 99.92
TIGR00566188 trpG_papA glutamine amidotransferase of anthranila 99.92
COG0512191 PabA Anthranilate/para-aminobenzoate synthases com 99.92
CHL00101190 trpG anthranilate synthase component 2 99.92
PRK06895190 putative anthranilate synthase component II; Provi 99.92
PRK07649195 para-aminobenzoate/anthranilate synthase glutamine 99.92
TIGR00888188 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N 99.92
cd01743184 GATase1_Anthranilate_Synthase Type 1 glutamine ami 99.91
PRK06774191 para-aminobenzoate synthase component II; Provisio 99.91
PRK00758184 GMP synthase subunit A; Validated 99.9
PRK07765214 para-aminobenzoate synthase component II; Provisio 99.9
cd01742181 GATase1_GMP_Synthase Type 1 glutamine amidotransfe 99.9
PRK08857193 para-aminobenzoate synthase component II; Provisio 99.9
TIGR01823 742 PabB-fungal aminodeoxychorismate synthase, fungal 99.89
PRK03619219 phosphoribosylformylglycinamidine synthase I; Prov 99.88
PF07722217 Peptidase_C26: Peptidase C26; InterPro: IPR011697 99.88
PRK05637208 anthranilate synthase component II; Provisional 99.88
PRK13566720 anthranilate synthase; Provisional 99.88
TIGR01815717 TrpE-clade3 anthranilate synthase, alpha proteobac 99.88
PLN02347 536 GMP synthetase 99.87
PRK13170196 hisH imidazole glycerol phosphate synthase subunit 99.87
cd01745189 GATase1_2 Subgroup of proteins having the Type 1 g 99.85
CHL00188210 hisH imidazole glycerol phosphate synthase subunit 99.85
PRK13146209 hisH imidazole glycerol phosphate synthase subunit 99.85
PRK14607 534 bifunctional glutamine amidotransferase/anthranila 99.85
PRK00074 511 guaA GMP synthase; Reviewed 99.84
PRK14004210 hisH imidazole glycerol phosphate synthase subunit 99.83
PRK13142192 hisH imidazole glycerol phosphate synthase subunit 99.83
cd01747273 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidot 99.83
PRK13141205 hisH imidazole glycerol phosphate synthase subunit 99.83
PLN02889 918 oxo-acid-lyase/anthranilate synthase 99.82
PRK13143200 hisH imidazole glycerol phosphate synthase subunit 99.81
PRK13152201 hisH imidazole glycerol phosphate synthase subunit 99.81
cd01748198 GATase1_IGP_Synthase Type 1 glutamine amidotransfe 99.81
PRK09522 531 bifunctional glutamine amidotransferase/anthranila 99.8
PRK13181199 hisH imidazole glycerol phosphate synthase subunit 99.8
cd01741188 GATase1_1 Subgroup of proteins having the Type 1 g 99.79
PLN02832248 glutamine amidotransferase subunit of pyridoxal 5' 99.78
PRK06490239 glutamine amidotransferase; Provisional 99.78
PRK13525189 glutamine amidotransferase subunit PdxT; Provision 99.78
PRK09065237 glutamine amidotransferase; Provisional 99.78
PRK13527200 glutamine amidotransferase subunit PdxT; Provision 99.77
COG0518198 GuaA GMP synthase - Glutamine amidotransferase dom 99.77
PLN02617 538 imidazole glycerol phosphate synthase hisHF 99.76
TIGR01855196 IMP_synth_hisH imidazole glycerol phosphate syntha 99.76
PRK07053234 glutamine amidotransferase; Provisional 99.76
PRK05665240 amidotransferase; Provisional 99.76
TIGR01737227 FGAM_synth_I phosphoribosylformylglycinamidine syn 99.75
PRK07567242 glutamine amidotransferase; Provisional 99.74
TIGR03800184 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, gl 99.72
KOG1224 767 consensus Para-aminobenzoate (PABA) synthase ABZ1 99.7
KOG0026223 consensus Anthranilate synthase, beta chain [Amino 99.69
PRK08250235 glutamine amidotransferase; Provisional 99.67
KOG0623 541 consensus Glutamine amidotransferase/cyclase [Amin 99.59
cd01749183 GATase1_PB Glutamine Amidotransferase (GATase_I) i 99.59
PRK01077451 cobyrinic acid a,c-diamide synthase; Validated 99.49
PRK01175261 phosphoribosylformylglycinamidine synthase I; Prov 99.46
PRK13526179 glutamine amidotransferase subunit PdxT; Provision 99.43
KOG1622 552 consensus GMP synthase [Nucleotide transport and m 99.41
COG0047231 PurL Phosphoribosylformylglycinamidine (FGAM) synt 99.39
cd01740238 GATase1_FGAR_AT Type 1 glutamine amidotransferase 99.36
KOG3179245 consensus Predicted glutamine synthetase [Nucleoti 99.36
PRK05368302 homoserine O-succinyltransferase; Provisional 99.33
KOG1559340 consensus Gamma-glutamyl hydrolase [Coenzyme trans 99.33
TIGR00379449 cobB cobyrinic acid a,c-diamide synthase. This mod 99.27
PRK00784488 cobyric acid synthase; Provisional 99.22
TIGR00313475 cobQ cobyric acid synthase CobQ. 99.2
COG0311194 PDX2 Predicted glutamine amidotransferase involved 99.18
PF01174188 SNO: SNO glutamine amidotransferase family; InterP 99.07
PRK13896433 cobyrinic acid a,c-diamide synthase; Provisional 99.02
PF13507259 GATase_5: CobB/CobQ-like glutamine amidotransferas 98.9
TIGR018571239 FGAM-synthase phosphoribosylformylglycinamidine sy 98.83
PRK052971290 phosphoribosylformylglycinamidine synthase; Provis 98.81
KOG3210226 consensus Imidazoleglycerol-phosphate synthase sub 98.75
cd01750194 GATase1_CobQ Type 1 glutamine amidotransferase (GA 98.7
PF00988131 CPSase_sm_chain: Carbamoyl-phosphate synthase smal 98.69
PLN032061307 phosphoribosylformylglycinamidine synthase; Provis 98.67
TIGR017351310 FGAM_synt phosphoribosylformylglycinamidine syntha 98.65
PRK06278 476 cobyrinic acid a,c-diamide synthase; Validated 98.48
cd03130198 GATase1_CobB Type 1 glutamine amidotransferase (GA 98.47
PHA033661304 FGAM-synthase; Provisional 98.2
TIGR017391202 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM 98.14
COG1797451 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme 98.04
cd01653115 GATase1 Type 1 glutamine amidotransferase (GATase1 97.97
cd03144114 GATase1_ScBLP_like Type 1 glutamine amidotransfera 97.84
cd03146212 GAT1_Peptidase_E Type 1 glutamine amidotransferase 97.83
PF04204298 HTS: Homoserine O-succinyltransferase ; InterPro: 97.82
cd03131175 GATase1_HTS Type 1 glutamine amidotransferase (GAT 97.7
PF07685158 GATase_3: CobB/CobQ-like glutamine amidotransferas 97.66
cd0312892 GAT_1 Type 1 glutamine amidotransferase (GATase1)- 97.59
TIGR01001300 metA homoserine O-succinyltransferase. The apparen 97.58
TIGR01382166 PfpI intracellular protease, PfpI family. The memb 97.0
PRK11780217 isoprenoid biosynthesis protein with amidotransfer 96.79
cd03134165 GATase1_PfpI_like A type 1 glutamine amidotransfer 96.76
cd03133213 GATase1_ES1 Type 1 glutamine amidotransferase (GAT 96.67
PRK05282233 (alpha)-aspartyl dipeptidase; Validated 96.44
cd03169180 GATase1_PfpI_1 Type 1 glutamine amidotransferase ( 96.33
cd03132142 GATase1_catalase Type 1 glutamine amidotransferase 96.26
COG0693188 ThiJ Putative intracellular protease/amidase [Gene 96.19
PF09825 367 BPL_N: Biotin-protein ligase, N terminal; InterPro 96.11
COG1492486 CobQ Cobyric acid synthase [Coenzyme metabolism] 95.92
PRK00090222 bioD dithiobiotin synthetase; Reviewed 95.6
PRK11574196 oxidative-stress-resistance chaperone; Provisional 95.56
cd02037169 MRP-like MRP (Multiple Resistance and pH adaptatio 95.55
cd03137187 GATase1_AraC_1 AraC transcriptional regulators hav 95.51
PRK12374231 putative dithiobiotin synthetase; Provisional 95.4
cd03147231 GATase1_Ydr533c_like Type 1 glutamine amidotransfe 95.34
KOG19071320 consensus Phosphoribosylformylglycinamidine syntha 95.12
PRK13768253 GTPase; Provisional 94.99
PF01965147 DJ-1_PfpI: DJ-1/PfpI family; InterPro: IPR002818 T 94.97
TIGR01383179 not_thiJ DJ-1 family protein. This model represent 94.85
PRK04155287 chaperone protein HchA; Provisional 94.71
cd0198399 Fer4_NifH The Fer4_NifH superfamily contains a var 94.61
TIGR01968261 minD_bact septum site-determining protein MinD. Th 94.47
COG3442250 Predicted glutamine amidotransferase [General func 94.44
PRK09435332 membrane ATPase/protein kinase; Provisional 94.23
cd03148232 GATase1_EcHsp31_like Type 1 glutamine amidotransfe 94.15
cd03129210 GAT1_Peptidase_E_like Type 1 glutamine amidotransf 94.11
cd03140170 GATase1_PfpI_3 Type 1 glutamine amidotransferase ( 94.03
cd03141221 GATase1_Hsp31_like Type 1 glutamine amidotransfera 93.96
cd03138195 GATase1_AraC_2 AraC transcriptional regulators hav 93.6
cd03135163 GATase1_DJ-1 Type 1 glutamine amidotransferase (GA 93.58
PRK14974336 cell division protein FtsY; Provisional 93.51
PRK11249752 katE hydroperoxidase II; Provisional 93.35
PRK05632 684 phosphate acetyltransferase; Reviewed 93.18
cd00550254 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). 92.91
TIGR00750300 lao LAO/AO transport system ATPase. Mutations have 92.83
PRK10867433 signal recognition particle protein; Provisional 92.72
TIGR00064272 ftsY signal recognition particle-docking protein F 92.42
cd03139183 GATase1_PfpI_2 Type 1 glutamine amidotransferase ( 92.2
cd03136185 GATase1_AraC_ArgR_like AraC transcriptional regula 91.97
TIGR03371246 cellulose_yhjQ cellulose synthase operon protein Y 91.55
PF13278166 DUF4066: Putative amidotransferase; PDB: 3BHN_A 3M 91.26
cd03114148 ArgK-like The function of this protein family is u 90.86
TIGR01969251 minD_arch cell division ATPase MinD, archaeal. Thi 90.59
PRK11889436 flhF flagellar biosynthesis regulator FlhF; Provis 90.4
cd03115173 SRP The signal recognition particle (SRP) mediates 89.64
TIGR00347166 bioD dethiobiotin synthase. Dethiobiotin synthase 89.18
COG1897307 MetA Homoserine trans-succinylase [Amino acid tran 89.14
PHA02518211 ParA-like protein; Provisional 89.11
COG0132223 BioD Dethiobiotin synthetase [Coenzyme metabolism] 88.73
PRK09393322 ftrA transcriptional activator FtrA; Provisional 88.33
TIGR00959428 ffh signal recognition particle protein. This mode 88.33
TIGR02069250 cyanophycinase cyanophycinase. This model describe 87.83
PRK13849231 putative crown gall tumor protein VirC1; Provision 87.58
PRK14494229 putative molybdopterin-guanine dinucleotide biosyn 86.7
PRK10818270 cell division inhibitor MinD; Provisional 86.66
PF13500199 AAA_26: AAA domain; PDB: 3OF5_A 2IOJ_A 4A0G_B 4A0R 86.53
cd02042104 ParA ParA and ParB of Caulobacter crescentus belon 86.5
TIGR03499282 FlhF flagellar biosynthetic protein FlhF. 85.88
cd02035217 ArsA ArsA ATPase functionas as an efflux pump loca 85.13
COG2894272 MinD Septum formation inhibitor-activating ATPase 84.8
KOG2764247 consensus Putative transcriptional regulator DJ-1 84.61
CHL00072290 chlL photochlorophyllide reductase subunit L 84.37
PRK14493274 putative bifunctional molybdopterin-guanine dinucl 84.13
cd03116159 MobB Molybdenum is an essential trace element in t 83.38
cd02029277 PRK_like Phosphoribulokinase-like (PRK-like) is a 82.98
PRK13232273 nifH nitrogenase reductase; Reviewed 82.42
cd03145217 GAT1_cyanophycinase Type 1 glutamine amidotransfer 81.41
COG0003322 ArsA Predicted ATPase involved in chromosome parti 81.2
cd02040270 NifH NifH gene encodes component II (iron protein) 81.15
PRK13230279 nitrogenase reductase-like protein; Reviewed 80.83
>COG0504 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.6e-210  Score=1639.77  Aligned_cols=530  Identities=56%  Similarity=0.927  Sum_probs=512.2

Q ss_pred             CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 008476            1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI   80 (564)
Q Consensus         1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg~e~dldlg~yerf~~~   80 (564)
                      ||||||||||+|||||||+|||||+|||+|||+||++|||||||||||||||||||||||||||+||||||||||||+|+
T Consensus         1 ~KyIfVTGGVvSslGKGi~aaSlg~lLk~rG~~Vt~~KlDPYlNvDpGTMsP~qHGEVfVtdDG~EtDLDLGhYERF~~~   80 (533)
T COG0504           1 TKYIFVTGGVVSSLGKGITAASLGRLLKARGLKVTIQKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFLDV   80 (533)
T ss_pred             CeEEEEeCCeecccccHHHHHHHHHHHHHCCceEEEEecccceecCCCCCCcccCceEEECCCCccccccccchhhhcCC
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 008476           81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI  160 (564)
Q Consensus        81 ~~~~~~~~t~g~iy~~vi~ker~g~ylg~tvqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggtvgdies~pf~  160 (564)
                      +||++||+||||||++||+|||+|||||+|||||||||||||+||+++|+      .. +||||||||||||||||+|||
T Consensus        81 ~l~~~~niTtGkiY~~Vi~kER~GdYLG~TVQvIPHiT~eIk~~I~~~a~------~~-~DvvivEIGGTVGDIEslpFl  153 (533)
T COG0504          81 NLSKDNNITTGKIYSEVIEKERRGDYLGKTVQVIPHITDEIKDRIREAAD------ST-ADVVIVEIGGTVGDIESLPFL  153 (533)
T ss_pred             CccccCCccccHHHHHHHHHHhcCCccCceeEECCCcchHHHHHHHHhcC------CC-CCEEEEEeCCceecccccHHH
Confidence            99999999999999999999999999999999999999999999999995      22 999999999999999999999


Q ss_pred             HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhhhhhhhCCCcccEEEEeeCCCCCcchhccccccCCCCCCC
Q 008476          161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN  240 (564)
Q Consensus       161 ea~rq~~~~~~~~~~~~~h~~~vp~~~~~~e~ktkptq~svk~l~s~Gi~pd~lv~R~~~~l~~~~r~kisl~~~v~~~~  240 (564)
                      ||+||||.++|++|++|||+||||||+++||+||||||||||+|||+|||||++||||+++++.+.|+||||||+|++++
T Consensus       154 EAiRQ~~~e~g~~n~~fiH~tlvpyi~~~gE~KTKPTQhSVkeLR~iGI~PDiii~Rs~~~l~~~~~~KIAlfc~V~~~~  233 (533)
T COG0504         154 EAIRQLRLELGRENVLFIHVTLVPYIAAAGELKTKPTQHSVKELRSIGIQPDILICRSERPLPEEERRKIALFCNVPEEA  233 (533)
T ss_pred             HHHHHHHhhhCcccEEEEEEecceeecccCccCCCCchHHHHHHHhcCCCcceEEEecCCCCCHHHHHHHHHhcCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeCCCCCcccccHHHHHhhhHHHHHHHcCCCCCCCccchHHHHHHHhhhcCCCCceEEEEEeccCCCcchHHHHHHHH
Q 008476          241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKAL  320 (564)
Q Consensus       241 Vi~~~dvdtiy~vp~~L~~qG~~~~i~~~l~l~~~~~~~~~~~w~~~~~~~~~~~~~~~IavVGkY~~~~Day~SIi~aL  320 (564)
                      ||+++|++|+|++|+.|++||+++.++++|+|+  .+.+++++|+++++++.++.++++||+||||.++.|||+|+++||
T Consensus       234 Vi~~~Dv~siY~vPl~l~~qgl~~~i~~~l~l~--~~~~dl~~W~~~v~~i~~~~~~v~IalVGKYv~l~DaY~Sv~EAL  311 (533)
T COG0504         234 VISAPDVESIYEVPLLLEKQGLDDYILERLNLN--APEPDLSEWKDLVDKIKNPKKEVTIALVGKYVELPDAYKSVIEAL  311 (533)
T ss_pred             eEecccHHHHHHhHHHHHHcchHHHHHHHhCCC--CCCcchHHHHHHHHHhcCCCCceEEEEEECCcCchhHHHHHHHHH
Confidence            999999999999999999999999999999997  467899999999999999888899999999999999999999999


Q ss_pred             HHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhcc-CCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEeh
Q 008476          321 LHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK-GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICL  399 (564)
Q Consensus       321 ~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~-~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGICL  399 (564)
                      +|+|+++.++|++.||+|+++++++..           .+. .+|||+||||||.|+++|++.+++|||||++|+|||||
T Consensus       312 ~hag~~~~~~v~i~wIdse~le~~~~~-----------~~~~~~dgIlVPGGFG~RG~eGkI~Ai~yAREn~iP~lGICl  380 (533)
T COG0504         312 KHAGIALGVKVNIKWIDSEDLEEENAA-----------ELEKLVDGILVPGGFGYRGVEGKIAAIRYARENNIPFLGICL  380 (533)
T ss_pred             HhhhhhcCCceeeEEEccccccccchh-----------hhhhcCCEEEeCCCCCcCchHHHHHHHHHHHhcCCCEEEEch
Confidence            999999999999999999999875431           122 29999999999999999999999999999999999999


Q ss_pred             hHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCc-ccccCCceeecceeeEeecCCchhhhccCCceeEeeeec
Q 008476          400 GMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-KTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHR  478 (564)
Q Consensus       400 GmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~-~~~~GgtmrlG~~~v~l~~~~s~~~~iyg~~~~I~erh~  478 (564)
                      |||++++||+|||+||++|+|+||++++++|||++|+|+. ...+|||||||+++|.+.++ |+++++|+ +..|.||||
T Consensus       381 GmQ~aviE~ARnv~Gl~~AnS~Efdp~t~~pVv~l~~eq~~~~~lGGTmRLG~y~~~l~~g-T~a~~lY~-~~~v~ERHR  458 (533)
T COG0504         381 GMQLAVIEFARNVLGLEGANSTEFDPDTKYPVVDLMPEQKDVVDLGGTMRLGAYPCRLKPG-TLAAKLYG-KDEIYERHR  458 (533)
T ss_pred             hHHHHHHHHHHHhcCCccCcccccCCCCCCceEEeccccccCCcCCceeeccceeeecCCC-cHHHHHhC-CCeeeeecc
Confidence            9999999999999999999999999999999999999964 67799999999999999999 99999996 578999999


Q ss_pred             eeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCchHHHHHHHHHHhccCCc
Q 008476          479 HRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGNISHLYFVCVC  552 (564)
Q Consensus       479 HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss~p~~p~pLF~~Fv~aa~~~~~~  552 (564)
                      |||||||+|++.|+..|++|+|+++||.++|++|+++||||+|+||||||+|+|.+|||||.+|++||.++.++
T Consensus       459 HRYEvN~~y~~~le~~Gl~~sg~s~d~~lvEivE~~~hpfFv~~QfHPEf~SrP~~phPlf~~fv~Aa~~~~~~  532 (533)
T COG0504         459 HRYEVNNDYRDQLEKAGLVFSGTSPDGGLVEIVELPDHPFFVATQFHPEFKSRPLRPHPLFVGFVKAALEYKKD  532 (533)
T ss_pred             chhhcCHHHHHHHHhCCeEEEEEcCCCCeEEEEEcCCCceEEEEcccccccCCCCCCCccHHHHHHHHHHhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999887643

>PLN02327 CTP synthase Back     alignment and domain information
>KOG2387 consensus CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK05380 pyrG CTP synthetase; Validated Back     alignment and domain information
>TIGR00337 PyrG CTP synthase Back     alignment and domain information
>PF06418 CTP_synth_N: CTP synthase N-terminus; InterPro: IPR017456 CTP synthase is involved in pyrimidine ribonucleotide/ribonucleoside metabolism, catalysing the synthesis of CTP from UTP by amination of the pyrimidine ring at the 4-position [] Back     alignment and domain information
>cd03113 CTGs CTP synthetase (CTPs) is a two-domain protein, which consists of an N-terminal synthetase domain and C-terminal glutaminase domain Back     alignment and domain information
>PRK06186 hypothetical protein; Validated Back     alignment and domain information
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism] Back     alignment and domain information
>cd01746 GATase1_CTP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase Back     alignment and domain information
>PRK12564 carbamoyl phosphate synthase small subunit; Reviewed Back     alignment and domain information
>TIGR01368 CPSaseIIsmall carbamoyl-phosphate synthase, small subunit Back     alignment and domain information
>PRK12838 carbamoyl phosphate synthase small subunit; Reviewed Back     alignment and domain information
>CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional Back     alignment and domain information
>PLN02771 carbamoyl-phosphate synthase (glutamine-hydrolyzing) Back     alignment and domain information
>KOG0370 consensus Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase) [General function prediction only] Back     alignment and domain information
>PF00117 GATase: Glutamine amidotransferase class-I; InterPro: IPR017926 Glutamine amidotransferase (GATase) enzymes catalyse the removal of the ammonia group from glutamine and then transfer this group to a substrate to form a new carbon-nitrogen group [] Back     alignment and domain information
>COG0118 HisH Glutamine amidotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>cd01744 GATase1_CPSase Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II Back     alignment and domain information
>COG2071 Predicted glutamine amidotransferases [General function prediction only] Back     alignment and domain information
>PLN02335 anthranilate synthase Back     alignment and domain information
>PRK08007 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PRK05670 anthranilate synthase component II; Provisional Back     alignment and domain information
>PRK11366 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional Back     alignment and domain information
>TIGR00566 trpG_papA glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase Back     alignment and domain information
>COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>CHL00101 trpG anthranilate synthase component 2 Back     alignment and domain information
>PRK06895 putative anthranilate synthase component II; Provisional Back     alignment and domain information
>PRK07649 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II; Validated Back     alignment and domain information
>TIGR00888 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit Back     alignment and domain information
>cd01743 GATase1_Anthranilate_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase Back     alignment and domain information
>PRK06774 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PRK00758 GMP synthase subunit A; Validated Back     alignment and domain information
>PRK07765 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>cd01742 GATase1_GMP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase Back     alignment and domain information
>PRK08857 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>TIGR01823 PabB-fungal aminodeoxychorismate synthase, fungal clade Back     alignment and domain information
>PRK03619 phosphoribosylformylglycinamidine synthase I; Provisional Back     alignment and domain information
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK05637 anthranilate synthase component II; Provisional Back     alignment and domain information
>PRK13566 anthranilate synthase; Provisional Back     alignment and domain information
>TIGR01815 TrpE-clade3 anthranilate synthase, alpha proteobacterial clade Back     alignment and domain information
>PLN02347 GMP synthetase Back     alignment and domain information
>PRK13170 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>cd01745 GATase1_2 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>CHL00188 hisH imidazole glycerol phosphate synthase subunit hisH; Provisional Back     alignment and domain information
>PRK13146 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK00074 guaA GMP synthase; Reviewed Back     alignment and domain information
>PRK14004 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13142 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>cd01747 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase Back     alignment and domain information
>PRK13141 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PLN02889 oxo-acid-lyase/anthranilate synthase Back     alignment and domain information
>PRK13143 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13152 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>cd01748 GATase1_IGP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS) Back     alignment and domain information
>PRK09522 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK13181 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>cd01741 GATase1_1 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>PLN02832 glutamine amidotransferase subunit of pyridoxal 5'-phosphate synthase complex Back     alignment and domain information
>PRK06490 glutamine amidotransferase; Provisional Back     alignment and domain information
>PRK13525 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>PRK09065 glutamine amidotransferase; Provisional Back     alignment and domain information
>PRK13527 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>PLN02617 imidazole glycerol phosphate synthase hisHF Back     alignment and domain information
>TIGR01855 IMP_synth_hisH imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Back     alignment and domain information
>PRK07053 glutamine amidotransferase; Provisional Back     alignment and domain information
>PRK05665 amidotransferase; Provisional Back     alignment and domain information
>TIGR01737 FGAM_synth_I phosphoribosylformylglycinamidine synthase I Back     alignment and domain information
>PRK07567 glutamine amidotransferase; Provisional Back     alignment and domain information
>TIGR03800 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 Back     alignment and domain information
>KOG1224 consensus Para-aminobenzoate (PABA) synthase ABZ1 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0026 consensus Anthranilate synthase, beta chain [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08250 glutamine amidotransferase; Provisional Back     alignment and domain information
>KOG0623 consensus Glutamine amidotransferase/cyclase [Amino acid transport and metabolism] Back     alignment and domain information
>cd01749 GATase1_PB Glutamine Amidotransferase (GATase_I) involved in pyridoxine biosynthesis Back     alignment and domain information
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated Back     alignment and domain information
>PRK01175 phosphoribosylformylglycinamidine synthase I; Provisional Back     alignment and domain information
>PRK13526 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>KOG1622 consensus GMP synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0047 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>cd01740 GATase1_FGAR_AT Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase Back     alignment and domain information
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK05368 homoserine O-succinyltransferase; Provisional Back     alignment and domain information
>KOG1559 consensus Gamma-glutamyl hydrolase [Coenzyme transport and metabolism] Back     alignment and domain information
>TIGR00379 cobB cobyrinic acid a,c-diamide synthase Back     alignment and domain information
>PRK00784 cobyric acid synthase; Provisional Back     alignment and domain information
>TIGR00313 cobQ cobyric acid synthase CobQ Back     alignment and domain information
>COG0311 PDX2 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis [Coenzyme metabolism] Back     alignment and domain information
>PF01174 SNO: SNO glutamine amidotransferase family; InterPro: IPR002161 Members of this family are involved in the pyridoxine biosynthetic pathway [, ] Back     alignment and domain information
>PRK13896 cobyrinic acid a,c-diamide synthase; Provisional Back     alignment and domain information
>PF13507 GATase_5: CobB/CobQ-like glutamine amidotransferase domain; PDB: 3D54_L 3UMM_A 3UJN_A 3UGJ_A 1T3T_A Back     alignment and domain information
>TIGR01857 FGAM-synthase phosphoribosylformylglycinamidine synthase, clade II Back     alignment and domain information
>PRK05297 phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>KOG3210 consensus Imidazoleglycerol-phosphate synthase subunit H-like [Coenzyme transport and metabolism] Back     alignment and domain information
>cd01750 GATase1_CobQ Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ) Back     alignment and domain information
>PF00988 CPSase_sm_chain: Carbamoyl-phosphate synthase small chain, CPSase domain; InterPro: IPR002474 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) Back     alignment and domain information
>PLN03206 phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>TIGR01735 FGAM_synt phosphoribosylformylglycinamidine synthase, single chain form Back     alignment and domain information
>PRK06278 cobyrinic acid a,c-diamide synthase; Validated Back     alignment and domain information
>cd03130 GATase1_CobB Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase Back     alignment and domain information
>PHA03366 FGAM-synthase; Provisional Back     alignment and domain information
>TIGR01739 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM-synthase Back     alignment and domain information
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] Back     alignment and domain information
>cd01653 GATase1 Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>cd03144 GATase1_ScBLP_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP) Back     alignment and domain information
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E Back     alignment and domain information
>PF04204 HTS: Homoserine O-succinyltransferase ; InterPro: IPR005697 This family of enzymes, homoserine O-succinyltransferase, catalyses the first step in the biosynthesis of methionine: Succinyl-CoA + L-homoserine = CoA + O-succinyl-L-homoserine This enzyme is consequently essential for the survival of bacteria, plants and fungi Back     alignment and domain information
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS) Back     alignment and domain information
>PF07685 GATase_3: CobB/CobQ-like glutamine amidotransferase domain; InterPro: IPR011698 This group of enzymes was suggested to be related to the MinD family of ATPases involved in regulation of cell division in bacteria and archaea [] Back     alignment and domain information
>cd03128 GAT_1 Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>TIGR01001 metA homoserine O-succinyltransferase Back     alignment and domain information
>TIGR01382 PfpI intracellular protease, PfpI family Back     alignment and domain information
>PRK11780 isoprenoid biosynthesis protein with amidotransferase-like domain; Provisional Back     alignment and domain information
>cd03134 GATase1_PfpI_like A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus Back     alignment and domain information
>cd03133 GATase1_ES1 Type 1 glutamine amidotransferase (GATase1)-like domain found in zebrafish ES1 Back     alignment and domain information
>PRK05282 (alpha)-aspartyl dipeptidase; Validated Back     alignment and domain information
>cd03169 GATase1_PfpI_1 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus Back     alignment and domain information
>cd03132 GATase1_catalase Type 1 glutamine amidotransferase (GATase1)-like domain found in at the C-terminal of several large catalases Back     alignment and domain information
>COG0693 ThiJ Putative intracellular protease/amidase [General function prediction only] Back     alignment and domain information
>PF09825 BPL_N: Biotin-protein ligase, N terminal; InterPro: IPR019197 The function of this structural domain is unknown Back     alignment and domain information
>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism] Back     alignment and domain information
>PRK00090 bioD dithiobiotin synthetase; Reviewed Back     alignment and domain information
>PRK11574 oxidative-stress-resistance chaperone; Provisional Back     alignment and domain information
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily Back     alignment and domain information
>cd03137 GATase1_AraC_1 AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>PRK12374 putative dithiobiotin synthetase; Provisional Back     alignment and domain information
>cd03147 GATase1_Ydr533c_like Type 1 glutamine amidotransferase (GATase1)-like domain found in Saccharomyces cerevisiae Ydr533c protein Back     alignment and domain information
>KOG1907 consensus Phosphoribosylformylglycinamidine synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK13768 GTPase; Provisional Back     alignment and domain information
>PF01965 DJ-1_PfpI: DJ-1/PfpI family; InterPro: IPR002818 This signature defines a diverse group of protein families which include proteins involved in RNA-protein interaction regulation, thiamine biosynthesis, Ras-related signal transduction, and those with protease activity Back     alignment and domain information
>TIGR01383 not_thiJ DJ-1 family protein Back     alignment and domain information
>PRK04155 chaperone protein HchA; Provisional Back     alignment and domain information
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain Back     alignment and domain information
>TIGR01968 minD_bact septum site-determining protein MinD Back     alignment and domain information
>COG3442 Predicted glutamine amidotransferase [General function prediction only] Back     alignment and domain information
>PRK09435 membrane ATPase/protein kinase; Provisional Back     alignment and domain information
>cd03148 GATase1_EcHsp31_like Type 1 glutamine amidotransferase (GATase1)-like domain found in Escherichia coli Hsp31 protein (EcHsp31) Back     alignment and domain information
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins Back     alignment and domain information
>cd03140 GATase1_PfpI_3 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus Back     alignment and domain information
>cd03141 GATase1_Hsp31_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein Back     alignment and domain information
>cd03138 GATase1_AraC_2 AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>cd03135 GATase1_DJ-1 Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1 Back     alignment and domain information
>PRK14974 cell division protein FtsY; Provisional Back     alignment and domain information
>PRK11249 katE hydroperoxidase II; Provisional Back     alignment and domain information
>PRK05632 phosphate acetyltransferase; Reviewed Back     alignment and domain information
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA) Back     alignment and domain information
>TIGR00750 lao LAO/AO transport system ATPase Back     alignment and domain information
>PRK10867 signal recognition particle protein; Provisional Back     alignment and domain information
>TIGR00064 ftsY signal recognition particle-docking protein FtsY Back     alignment and domain information
>cd03139 GATase1_PfpI_2 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus Back     alignment and domain information
>cd03136 GATase1_AraC_ArgR_like AraC transcriptional regulators having an N-terminal Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ Back     alignment and domain information
>PF13278 DUF4066: Putative amidotransferase; PDB: 3BHN_A 3MGK_B 3NOV_A 3NON_B 3NOO_B 3NOQ_A 3NOR_A 3GRA_A 3EWN_A 3ER6_C Back     alignment and domain information
>cd03114 ArgK-like The function of this protein family is unkown Back     alignment and domain information
>TIGR01969 minD_arch cell division ATPase MinD, archaeal Back     alignment and domain information
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional Back     alignment and domain information
>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes Back     alignment and domain information
>TIGR00347 bioD dethiobiotin synthase Back     alignment and domain information
>COG1897 MetA Homoserine trans-succinylase [Amino acid transport and metabolism] Back     alignment and domain information
>PHA02518 ParA-like protein; Provisional Back     alignment and domain information
>COG0132 BioD Dethiobiotin synthetase [Coenzyme metabolism] Back     alignment and domain information
>PRK09393 ftrA transcriptional activator FtrA; Provisional Back     alignment and domain information
>TIGR00959 ffh signal recognition particle protein Back     alignment and domain information
>TIGR02069 cyanophycinase cyanophycinase Back     alignment and domain information
>PRK13849 putative crown gall tumor protein VirC1; Provisional Back     alignment and domain information
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional Back     alignment and domain information
>PRK10818 cell division inhibitor MinD; Provisional Back     alignment and domain information
>PF13500 AAA_26: AAA domain; PDB: 3OF5_A 2IOJ_A 4A0G_B 4A0R_A 4A0H_B 4A0F_B 3FMI_C 3FPA_D 3FMF_C 3FGN_A Back     alignment and domain information
>cd02042 ParA ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation Back     alignment and domain information
>TIGR03499 FlhF flagellar biosynthetic protein FlhF Back     alignment and domain information
>cd02035 ArsA ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell Back     alignment and domain information
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] Back     alignment and domain information
>KOG2764 consensus Putative transcriptional regulator DJ-1 [General function prediction only; Defense mechanisms] Back     alignment and domain information
>CHL00072 chlL photochlorophyllide reductase subunit L Back     alignment and domain information
>PRK14493 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE; Provisional Back     alignment and domain information
>cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes Back     alignment and domain information
>cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes Back     alignment and domain information
>PRK13232 nifH nitrogenase reductase; Reviewed Back     alignment and domain information
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase Back     alignment and domain information
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] Back     alignment and domain information
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase Back     alignment and domain information
>PRK13230 nitrogenase reductase-like protein; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query564
3nva_A535 Dimeric Form Of Ctp Synthase From Sulfolobus Solfat 1e-127
1vco_A550 Crystal Structure Of T.Th. Hb8 Ctp Synthetase Compl 1e-123
1vcm_A550 Crystal Structure Of T.Th. Hb8 Ctp Synthetase Lengt 1e-123
1s1m_A545 Crystal Structure Of E. Coli Ctp Synthetase Length 1e-120
2vo1_A295 Crystal Structure Of The Synthetase Domain Of Human 3e-83
3ihl_A282 Human Ctps2 Crystal Structure Length = 282 8e-82
2vkt_A289 Human Ctp Synthetase 2 - Glutaminase Domain Length 5e-79
2v4u_A289 Human Ctp Synthetase 2 - Glutaminase Domain In Comp 8e-78
2w7t_A273 Trypanosoma Brucei Ctps - Glutaminase Domain With B 9e-48
>pdb|3NVA|A Chain A, Dimeric Form Of Ctp Synthase From Sulfolobus Solfataricus Length = 535 Back     alignment and structure 
Iteration: 1

 Score =  453 bits (1166), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 235/529 (44%), Positives = 339/529 (64%), Gaps = 26/529 (4%)
Query: 20  ASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFMD 79
            +SIG+LLK  G  VT +KIDPY+N DAGTM+P+ H                 +YERFMD
Sbjct: 22  VASIGMLLKRRGYNVTAVKIDPYINVDAGTMNPYMHGEVFVTEDGAETDLDLGHYERFMD 81
Query: 80  IKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGP 139
           + +T+ NNIT GK+Y  VI KER+G YLG+TVQ++PH+TD+I+D      MI    K   
Sbjct: 82  VNMTKYNNITAGKVYFEVIKKEREGKYLGQTVQIIPHVTDQIKD------MIRYASKINN 135
Query: 140 VDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQH 199
            ++ ++E+GGT+GDIES+PF+EA+ Q     G  N   +H++LV  L+V GE KTKP QH
Sbjct: 136 AEITLVEIGGTVGDIESLPFLEAVRQLKLEEGEDNVIFVHIALVEYLSVTGELKTKPLQH 195
Query: 200 SVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRD 259
           SV+ LR  G+ P+ +  R+T+ LDD  + K++ F +V   +I++ YDV   + +P++L  
Sbjct: 196 SVQELRRIGIQPDFIVGRATLPLDDETRRKIALFTNVKVDHIVSSYDVETSYEVPIILES 255
Query: 260 QKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLH--EPVRIAMVGKYTGLSDAYLSIL 317
           QK    I   L L+   ++  L +W S      G++  + + IA+VGKYT L D+Y+SI 
Sbjct: 256 QKLVSKILSRLKLE--DRQVDLTDWISFVNNIKGINSKKTINIALVGKYTKLKDSYISIK 313
Query: 318 KALLHAS--VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375
           +A+ HAS  + +R KL+  WI + DLE  T+  N        ++L   +GI+V  GFG+R
Sbjct: 314 EAIYHASAYIGVRPKLI--WIESTDLESDTKNLN--------EILGNVNGIIVLPGFGSR 363
Query: 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFM 435
           G +GKI A KYAREH IP+LGIC G Q++++EFAR VL L +ANSTE +PNTK+P +  +
Sbjct: 364 GAEGKIKAIKYAREHNIPFLGICFGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLL 423
Query: 436 PEGSK-THMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENA 494
            E    T +GGTMRLG+++   + +   + +LYG +  + ERHRHRYEVNP  +  LE+A
Sbjct: 424 DEQKNVTQLGGTMRLGAQKIILK-EGTIAYQLYGKKV-VYERHRHRYEVNPKYVDILEDA 481
Query: 495 GLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGNI 543
           GL  +G  E    +EI+ELP++ +F+  Q HPE+KSRP  PSP++LG I
Sbjct: 482 GLVVSGISENG-LVEIIELPSNKFFVATQAHPEFKSRPTNPSPIYLGFI 529
>pdb|1VCO|A Chain A, Crystal Structure Of T.Th. Hb8 Ctp Synthetase Complex With Glutamine Length = 550 Back     alignment and structure
>pdb|1VCM|A Chain A, Crystal Structure Of T.Th. Hb8 Ctp Synthetase Length = 550 Back     alignment and structure
>pdb|1S1M|A Chain A, Crystal Structure Of E. Coli Ctp Synthetase Length = 545 Back     alignment and structure
>pdb|2VO1|A Chain A, Crystal Structure Of The Synthetase Domain Of Human Ctp Synthetase Length = 295 Back     alignment and structure
>pdb|3IHL|A Chain A, Human Ctps2 Crystal Structure Length = 282 Back     alignment and structure
>pdb|2VKT|A Chain A, Human Ctp Synthetase 2 - Glutaminase Domain Length = 289 Back     alignment and structure
>pdb|2V4U|A Chain A, Human Ctp Synthetase 2 - Glutaminase Domain In Complex With 5-Oxo-L-Norleucine Length = 289 Back     alignment and structure
>pdb|2W7T|A Chain A, Trypanosoma Brucei Ctps - Glutaminase Domain With Bound Acivicin Length = 273 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query564
3nva_A535 CTP synthase; rossman fold, nucleotide binding, LI 0.0
1vco_A550 CTP synthetase; tetramer, riken structural genomic 0.0
1s1m_A545 CTP synthase; CTP synthetase, UTP:ammonia ligase ( 0.0
2c5m_A294 CTP synthase; cytidine 5-prime triphosphate synthe 0.0
2v4u_A289 CTP synthase 2; pyrimidine biosynthesis, glutamine 1e-134
2w7t_A273 CTP synthetase, putative cytidine triphosphate syn 1e-113
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
1l9x_A315 Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCO 6e-09
3fij_A254 LIN1909 protein; 11172J, uncharacterized protein, 2e-07
1ka9_H200 Imidazole glycerol phosphtate synthase; riken stru 3e-05
1gpw_B201 Amidotransferase HISH; lyase/transferase, complex 1e-04
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus} Length = 535 Back     alignment and structure
 Score =  810 bits (2096), Expect = 0.0
 Identities = 253/543 (46%), Positives = 367/543 (67%), Gaps = 22/543 (4%)

Query: 2   KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVL 61
           KY++VTGGV+S +GKG   +SIG+LLK  G  VT +KIDPY+N DAGTM+P+ HGEVFV 
Sbjct: 4   KYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYINVDAGTMNPYMHGEVFVT 63

Query: 62  DDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEI 121
           +DG E DLDLG+YERFMD+ +T+ NNIT GK+Y  VI KER+G YLG+TVQ++PH+TD+I
Sbjct: 64  EDGAETDLDLGHYERFMDVNMTKYNNITAGKVYFEVIKKEREGKYLGQTVQIIPHVTDQI 123

Query: 122 QDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVS 181
           +D I   +      K    ++ ++E+GGT+GDIES+PF+EA+ Q     G  N   +H++
Sbjct: 124 KDMIRYAS------KINNAEITLVEIGGTVGDIESLPFLEAVRQLKLEEGEDNVIFVHIA 177

Query: 182 LVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNI 241
           LV  L+V GE KTKP QHSV+ LR  G+ P+ +  R+T+ LDD  + K++ F +V   +I
Sbjct: 178 LVEYLSVTGELKTKPLQHSVQELRRIGIQPDFIVGRATLPLDDETRRKIALFTNVKVDHI 237

Query: 242 ITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLH--EPVR 299
           ++ YDV   + +P++L  QK    I   L L+   ++  L +W S      G++  + + 
Sbjct: 238 VSSYDVETSYEVPIILESQKLVSKILSRLKLE--DRQVDLTDWISFVNNIKGINSKKTIN 295

Query: 300 IAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL 359
           IA+VGKYT L D+Y+SI +A+ HAS  +  +  + WI + DLE  ++ +N +      ++
Sbjct: 296 IALVGKYTKLKDSYISIKEAIYHASAYIGVRPKLIWIESTDLE--SDTKNLN------EI 347

Query: 360 LKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDAN 419
           L   +GI+V  GFG+RG +GKI A KYAREH IP+LGIC G Q++++EFAR VL L +AN
Sbjct: 348 LGNVNGIIVLPGFGSRGAEGKIKAIKYAREHNIPFLGICFGFQLSIVEFARDVLGLSEAN 407

Query: 420 STEFDPNTKNPCVIFMPE-GSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHR 478
           STE +PNTK+P +  + E  + T +GGTMRLG+++   + +   + +LYG +  + ERHR
Sbjct: 408 STEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILK-EGTIAYQLYG-KKVVYERHR 465

Query: 479 HRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPL 538
           HRYEVNP  +  LE+AGL  +G  E    +EI+ELP++ +F+  Q HPE+KSRP  PSP+
Sbjct: 466 HRYEVNPKYVDILEDAGLVVSGISENG-LVEIIELPSNKFFVATQAHPEFKSRPTNPSPI 524

Query: 539 FLG 541
           +LG
Sbjct: 525 YLG 527
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A Length = 550 Back     alignment and structure
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A* Length = 545 Back     alignment and structure
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A Length = 289 Back     alignment and structure
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei} Length = 273 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1 Length = 315 Back     alignment and structure
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} Length = 254 Back     alignment and structure
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1 Length = 200 Back     alignment and structure
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B Length = 201 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query564
3nva_A535 CTP synthase; rossman fold, nucleotide binding, LI 100.0
1vco_A550 CTP synthetase; tetramer, riken structural genomic 100.0
1s1m_A545 CTP synthase; CTP synthetase, UTP:ammonia ligase ( 100.0
2c5m_A294 CTP synthase; cytidine 5-prime triphosphate synthe 100.0
2vo1_A295 CTP synthase 1; pyrimidine biosynthesis, glutamine 100.0
2v4u_A289 CTP synthase 2; pyrimidine biosynthesis, glutamine 100.0
2w7t_A273 CTP synthetase, putative cytidine triphosphate syn 100.0
1a9x_B379 Carbamoyl phosphate synthetase (small chain); amid 100.0
3fij_A254 LIN1909 protein; 11172J, uncharacterized protein, 99.95
2a9v_A212 GMP synthase; structural genomics, joint center fo 99.93
1qdl_B195 Protein (anthranilate synthase (TRPG-SUBUNIT)); tr 99.92
1wl8_A189 GMP synthase [glutamine-hydrolyzing] subunit A; tr 99.92
4gud_A211 Imidazole glycerol phosphate synthase subunit His; 99.91
2vpi_A218 GMP synthase; guanine monophosphate synthetase, ph 99.91
1l9x_A315 Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCO 99.91
2ywj_A186 Glutamine amidotransferase subunit PDXT; uncharact 99.9
3r75_A645 Anthranilate/para-aminobenzoate synthases compone; 99.89
1i1q_B192 Anthranilate synthase component II; tryptophan bio 99.88
3uow_A 556 GMP synthetase; structural genomics consortium, SG 99.88
1o1y_A239 Conserved hypothetical protein TM1158; flavodoxin- 99.88
3tqi_A 527 GMP synthase [glutamine-hydrolyzing]; ligase; 2.84 99.88
3d54_D213 Phosphoribosylformylglycinamidine synthase 1; alph 99.88
1gpw_B201 Amidotransferase HISH; lyase/transferase, complex 99.87
1gpm_A 525 GMP synthetase, XMP aminase; class I glutamine ami 99.87
2ywb_A 503 GMP synthase [glutamine-hydrolyzing]; GMP syntheta 99.86
3l7n_A236 Putative uncharacterized protein; glutamine amidot 99.84
2ywd_A191 Glutamine amidotransferase subunit PDXT; pyridoxin 99.84
3m3p_A250 Glutamine amido transferase; structural genomics, 99.84
1q7r_A219 Predicted amidotransferase; structural genomics, Y 99.83
2nv0_A196 Glutamine amidotransferase subunit PDXT; 3-layer(A 99.82
1ka9_H200 Imidazole glycerol phosphtate synthase; riken stru 99.82
2vxo_A 697 GMP synthase [glutamine-hydrolyzing]; proto-oncoge 99.82
2iss_D208 Glutamine amidotransferase subunit PDXT; (beta/alp 99.81
2abw_A227 PDX2 protein, glutaminase; PLP-synthase, vitamin B 99.74
1jvn_A 555 Glutamine, bifunctional histidine biosynthesis pro 99.67
2vdj_A301 Homoserine O-succinyltransferase; methionine biosy 99.5
2h2w_A312 Homoserine O-succinyltransferase; TM0881, (EC 2.3. 99.49
3ugj_A1303 Phosphoribosylformylglycinamidine synthase; amidot 99.05
3l4e_A206 Uncharacterized peptidase LMO0363; hypothetical pr 98.45
1fy2_A229 Aspartyl dipeptidase; serine protease, catalytic t 98.41
1oi4_A193 Hypothetical protein YHBO; PFPI/THIJ family, compl 97.77
3l18_A168 Intracellular protease I; gatase1_PFPI_LIKE, hydro 97.43
3qxc_A242 Dethiobiotin synthetase; DTBS, structural genomics 96.82
2rk3_A197 Protein DJ-1; parkinson'S disease, THIJ, PFPI, cha 96.72
2vrn_A190 Protease I, DR1199; cysteine sulfenic acid, DJ-1/T 96.72
4dzz_A206 Plasmid partitioning protein PARF; deviant walker 96.67
4e08_A190 DJ-1 beta; flavodoxin-like fold, stress response, 96.55
2ab0_A205 YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase 96.38
3of5_A228 Dethiobiotin synthetase; structural genomics, cent 96.37
4hcj_A177 THIJ/PFPI domain protein; structural genomics, PSI 96.3
3er6_A209 Putative transcriptional regulator protein; struct 96.23
2fex_A188 Conserved hypothetical protein; structural genomic 96.15
3efe_A212 THIJ/PFPI family protein; structural GEN csgid, ce 96.04
3gra_A202 Transcriptional regulator, ARAC family; transcript 95.78
3fgn_A251 Dethiobiotin synthetase; biotin biosynthesis, BIOD 95.72
3uk7_A396 Class I glutamine amidotransferase-like domain-CO 95.69
3ej6_A688 Catalase-3; heme, hydrogen iron, metal-binding, ox 95.58
3l3b_A242 ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, 95.48
1hyq_A263 MIND, cell division inhibitor (MIND-1); MINC, FTSZ 95.44
3cne_A175 Putative protease I; structural genomics, PSI-2, M 95.35
1xjc_A169 MOBB protein homolog; structural genomics, midwest 95.29
3uk7_A 396 Class I glutamine amidotransferase-like domain-CO 95.24
3ttv_A753 Catalase HPII; heme orientation, oxidoreductase; H 95.23
3ot1_A208 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate 95.2
3mgk_A211 Intracellular protease/amidase related enzyme (THI 95.13
2ph1_A262 Nucleotide-binding protein; alpha-beta protein, st 95.08
3f5d_A206 Protein YDEA; unknow protein, PSI-II, nysgrc, stru 95.05
1vhq_A232 Enhancing lycopene biosynthesis protein 2; structu 95.03
3fse_A365 Two-domain protein containing DJ-1/THIJ/PFPI-like 95.02
2xxa_A433 Signal recognition particle protein; protein trans 94.79
3en0_A291 Cyanophycinase; serine protease, beta peptide spec 94.78
2xj4_A286 MIPZ; replication, cell division, ATPase, WACA; 1. 94.68
2g0t_A350 Conserved hypothetical protein; structural genomic 94.56
1u9c_A224 APC35852; structural genomics, protein structure i 94.43
3dm5_A443 SRP54, signal recognition 54 kDa protein; protein- 94.29
3ea0_A245 ATPase, para family; alpha-beta-alpha sandwich, st 94.13
3kl4_A433 SRP54, signal recognition 54 kDa protein; signal r 93.87
3noq_A231 THIJ/PFPI family protein; DJ-1 superfamily, isocya 93.85
3kjh_A254 CO dehydrogenase/acetyl-COA synthase complex, acce 93.78
1rw7_A243 YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI supe 93.51
3n7t_A247 Macrophage binding protein; seattle structural gen 93.41
2iuf_A688 Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Pen 93.31
3kkl_A244 Probable chaperone protein HSP33; peptidase, heat 93.2
1sy7_A715 Catalase 1; heme oxidation, singlet oxygen, oxidor 92.43
3end_A307 Light-independent protochlorophyllide reductase ir 92.16
4gdh_A194 DJ-1, uncharacterized protein C22E12.03C; unknown 92.13
1n57_A291 Chaperone HSP31, protein YEDU; alpha-beta sandwich 92.09
3ewn_A253 THIJ/PFPI family protein; monomer, PSI nysgrc, str 91.47
2ffh_A425 Protein (FFH); SRP54, signal recognition particle, 91.14
3fkq_A373 NTRC-like two-domain protein; RER070207001320, str 90.52
3q9l_A260 Septum site-determining protein MIND; ATPase, bact 90.36
1g3q_A237 MIND ATPase, cell division inhibitor; alpha-beta-a 90.23
1ihu_A589 Arsenical pump-driving ATPase; aluminum fluoride, 89.76
1np6_A174 Molybdopterin-guanine dinucleotide biosynthesis pr 89.31
3k9g_A267 PF-32 protein; ssgcid, SBRI, decode biostructures, 88.28
3fwy_A314 Light-independent protochlorophyllide reductase I 87.47
2afh_E289 Nitrogenase iron protein 1; nitrogen fixation, iro 86.71
1cp2_A269 CP2, nitrogenase iron protein; oxidoreductase; 1.9 86.47
3zq6_A324 Putative arsenical pump-driving ATPase; tail-ancho 86.04
1wcv_1257 SOJ, segregation protein; ATPase, bacterial, chrom 84.63
1z0s_A278 Probable inorganic polyphosphate/ATP-NAD kinase; A 84.17
1byi_A224 Dethiobiotin synthase; biotin synthesis, cyclo-lig 84.0
3ug7_A349 Arsenical pump-driving ATPase; tail-anchored, memb 83.18
3bhn_A236 THIJ/PFPI domain protein; structural genomics, joi 82.44
3pg5_A361 Uncharacterized protein; structural genomics, PSI- 82.39
1nks_A194 Adenylate kinase; thermophilic, transferase; HET: 81.48
1ls1_A295 Signal recognition particle protein; FFH, SRP54, S 80.97
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
Probab=100.00  E-value=3.6e-198  Score=1592.58  Aligned_cols=529  Identities=48%  Similarity=0.842  Sum_probs=509.5

Q ss_pred             CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 008476            1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI   80 (564)
Q Consensus         1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg~e~dldlg~yerf~~~   80 (564)
                      ||||||||||+|||||||+|||||+|||+|||+||+||||||||||||||||||||||||||||+||||||||||||||+
T Consensus         3 ~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpylnvd~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~   82 (535)
T 3nva_A            3 NKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYINVDAGTMNPYMHGEVFVTEDGAETDLDLGHYERFMDV   82 (535)
T ss_dssp             CEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSSSSSTTCCHHHHCCCEECTTCCEECTHHHHHHHHHCC
T ss_pred             ceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCcceeecCCCCCccccceEEEecCCccccccccchhhhcCC
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 008476           81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI  160 (564)
Q Consensus        81 ~~~~~~~~t~g~iy~~vi~ker~g~ylg~tvqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggtvgdies~pf~  160 (564)
                      +|||+||+||||||++||+|||||||||||||||||||||||+||+++|+      ..+|||||||||||||||||+|||
T Consensus        83 ~l~~~~n~ttg~iy~~vi~ker~g~ylg~tvqviphit~eik~~i~~~~~------~~~~dv~i~eiggtvgdies~pf~  156 (535)
T 3nva_A           83 NMTKYNNITAGKVYFEVIKKEREGKYLGQTVQIIPHVTDQIKDMIRYASK------INNAEITLVEIGGTVGDIESLPFL  156 (535)
T ss_dssp             CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHH------HHTCSEEEEEECSCTTSGGGHHHH
T ss_pred             CcccccCcchhHHHHHHHHHHhcCCcCCCeeEECCCchHHHHHHHHHhhc------cCCCCEEEEEeCCccchhcccHHH
Confidence            99999999999999999999999999999999999999999999999995      468999999999999999999999


Q ss_pred             HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhhhhhhhCCCcccEEEEeeCCCCCcchhccccccCCCCCCC
Q 008476          161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN  240 (564)
Q Consensus       161 ea~rq~~~~~~~~~~~~~h~~~vp~~~~~~e~ktkptq~svk~l~s~Gi~pd~lv~R~~~~l~~~~r~kisl~~~v~~~~  240 (564)
                      |||||||+++|++|+|||||||||||+++||+||||||||||+|||+|||||+|||||++++++++|+||||||||++++
T Consensus       157 ea~rq~~~~~g~~n~~~ih~tlvp~~~~~ge~ktkptqhsv~~Lrs~GIqPdilvcRs~~~l~~~~r~KiaLfc~V~~~~  236 (535)
T 3nva_A          157 EAVRQLKLEEGEDNVIFVHIALVEYLSVTGELKTKPLQHSVQELRRIGIQPDFIVGRATLPLDDETRRKIALFTNVKVDH  236 (535)
T ss_dssp             HHHHHHHHHHCTTTEEEEEEEECCBCTTTSSBCCHHHHHHHHHHHHHTCCCSEEEEEESSCCCHHHHHHHHHHTTCCGGG
T ss_pred             HHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCchHHHHHHHHhCCCCCCEEEEecCCCCCHHHHHhhhhhcCCChhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeCCCCCcccccHHHHHhhhHHHHHHHcCCCCCCCccchHHHHHHHhhhc--CCCCceEEEEEeccCCCcchHHHHHH
Q 008476          241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICD--GLHEPVRIAMVGKYTGLSDAYLSILK  318 (564)
Q Consensus       241 Vi~~~dvdtiy~vp~~L~~qG~~~~i~~~l~l~~~~~~~~~~~w~~~~~~~~--~~~~~~~IavVGkY~~~~Day~SIi~  318 (564)
                      ||+++|+||||++|++||+||+++.++++|+|+  .+.+++++|++++++++  ++.++++||+||||+++.|||.|+.+
T Consensus       237 VI~i~DvdtiY~vpl~L~~qGl~~~~~~~l~l~--~~~~~~~~w~~~~~~~~~~~~~~~v~IalVGKY~~l~DaY~Sv~e  314 (535)
T 3nva_A          237 IVSSYDVETSYEVPIILESQKLVSKILSRLKLE--DRQVDLTDWISFVNNIKGINSKKTINIALVGKYTKLKDSYISIKE  314 (535)
T ss_dssp             EEEEECCSCGGGHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHTTTCCCEEEEEEEESCTTSGGGGHHHHH
T ss_pred             eEecCCCChHHHhHHHHHHCCcHHHHHHHcCCC--CCCCCHHHHHHHHHHhhccCCCCeeEEEEEecCcCCchhHHHHHH
Confidence            999999999999999999999999999999997  46779999999999998  88889999999999999999999999


Q ss_pred             HHHHcCCcceeeeEEEEecCCCcccccccCCchhhhHHHHhccCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 008476          319 ALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC  398 (564)
Q Consensus       319 aL~~aG~~v~v~v~i~wi~s~~le~~~~~~~p~~y~~~~~~L~~~DGIllpGGfG~r~~eg~i~~ir~a~e~~iPiLGIC  398 (564)
                      ||+|+|.++.++|++.|++++++++++.        ++|+.|+++|||++|||||+++.++++.++++|+++++|+||||
T Consensus       315 AL~hag~~~~~~V~I~wIds~~l~~~~~--------~~~~~L~~~DgIIlpGG~G~~~~~g~i~~ir~a~~~~~PiLGIC  386 (535)
T 3nva_A          315 AIYHASAYIGVRPKLIWIESTDLESDTK--------NLNEILGNVNGIIVLPGFGSRGAEGKIKAIKYAREHNIPFLGIC  386 (535)
T ss_dssp             HHHHHHHHTTCEEEEEEEEGGGGCCSSS--------CCTTTTTSCSEEEECCCCSSTTHHHHHHHHHHHHHHTCCEEEET
T ss_pred             HHHHHHHHcCCCeEEEEecchhcccccc--------chhhhccCCCEEEECCCCCCccHHHHHHHHHHHHHcCCcEEEEC
Confidence            9999999999999999999998875432        13467899999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHhccccccccCCcccccCCCCCCCeeeecCCCc-ccccCCceeecceeeEeecCCchhhhccCCceeEeeee
Q 008476          399 LGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-KTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERH  477 (564)
Q Consensus       399 LGmQll~ia~g~~vlgl~dA~s~Ef~~~~~~~vi~~m~e~~-~~~~GgtmrlG~~~v~l~~~~s~~~~iyg~~~~I~erh  477 (564)
                      +|||+|++++|++++|++||+|+||++++++|+|.+|+++. ..++|+|||+|+|+|.+.++ |+++++|+ +..+.+||
T Consensus       387 lG~Qll~va~Gg~v~g~qda~s~Ef~~~~~~pvI~~m~eq~~~~~~ggtmrlg~h~v~l~~g-S~L~~iyG-~~~I~erH  464 (535)
T 3nva_A          387 FGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILKEG-TIAYQLYG-KKVVYERH  464 (535)
T ss_dssp             HHHHHHHHHHHHTTTCCTTCEETTTCTTCSCEEEECBCSSSCBCSSCCCCEEEEEEEEECTT-SHHHHHHT-SSEEEEEE
T ss_pred             cchhHHHHHhhccccCccCCcccccCCCCCCCeeecchhcccccccCCccccCceEEEEcCC-CcHHHHhC-CCeeeecc
Confidence            99999999999999999999999999999999999999864 58899999999999999998 89999996 66789999


Q ss_pred             ceeeeeChhhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCchHHHHHHHHHHhc
Q 008476          478 RHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGNISHLYF  548 (564)
Q Consensus       478 ~HrYeVn~~~v~~l~~~gl~~~a~s~dg~~vE~ie~~~~pffiGvQFHPE~ss~p~~p~pLF~~Fv~aa~~  548 (564)
                      ||||+||+.+.+.+++.|++++|+++|| ++|++|+++||||+|||||||+.++|.+++|||++|++||.+
T Consensus       465 rHryeVNs~h~q~l~~~GL~vsA~s~DG-~IEAIE~~~~pf~vGVQfHPE~~~~p~~~~~LF~~Fv~Aa~~  534 (535)
T 3nva_A          465 RHRYEVNPKYVDILEDAGLVVSGISENG-LVEIIELPSNKFFVATQAHPEFKSRPTNPSPIYLGFIRAVAS  534 (535)
T ss_dssp             EECCEECHHHHHHHHHTTCEEEEECTTC-CEEEEECTTSSCEEEESSCGGGGCCSSSCCHHHHHHHHHHTC
T ss_pred             cccceechHHHhhcccCCeEEEEEeCCC-CEEEEEeCCCCcEEEEEeCCEecCCCCChhHHHHHHHHHHHh
Confidence            9999999999999988999999999999 599999999999999999999999999999999999999864
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A Back     alignment and structure
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A* Back     alignment and structure
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A* Back     alignment and structure
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A Back     alignment and structure
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei} Back     alignment and structure
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B* Back     alignment and structure
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} Back     alignment and structure
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1 Back     alignment and structure
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1 Back     alignment and structure
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A Back     alignment and structure
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae} Back     alignment and structure
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens} Back     alignment and structure
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1 Back     alignment and structure
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii} Back     alignment and structure
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A* Back     alignment and structure
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B* Back     alignment and structure
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} Back     alignment and structure
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1 Back     alignment and structure
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii} Back     alignment and structure
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima} Back     alignment and structure
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B Back     alignment and structure
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1 Back     alignment and structure
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A* Back     alignment and structure
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans} Back     alignment and structure
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} Back     alignment and structure
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A* Back     alignment and structure
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1 Back     alignment and structure
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B* Back     alignment and structure
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1 Back     alignment and structure
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} Back     alignment and structure
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima} Back     alignment and structure
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G Back     alignment and structure
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A Back     alignment and structure
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A Back     alignment and structure
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima} Back     alignment and structure
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Back     alignment and structure
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes} Back     alignment and structure
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A Back     alignment and structure
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2 Back     alignment and structure
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A Back     alignment and structure
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A Back     alignment and structure
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ... Back     alignment and structure
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans} Back     alignment and structure
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A* Back     alignment and structure
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster} Back     alignment and structure
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2 Back     alignment and structure
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp} Back     alignment and structure
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii} Back     alignment and structure
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus} Back     alignment and structure
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2 Back     alignment and structure
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis} Back     alignment and structure
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida} Back     alignment and structure
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A* Back     alignment and structure
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana} Back     alignment and structure
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa} Back     alignment and structure
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis} Back     alignment and structure
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10 Back     alignment and structure
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10 Back     alignment and structure
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana} Back     alignment and structure
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ... Back     alignment and structure
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0 Back     alignment and structure
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum} Back     alignment and structure
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A* Back     alignment and structure
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis} Back     alignment and structure
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A Back     alignment and structure
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413} Back     alignment and structure
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9 Back     alignment and structure
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP} Back     alignment and structure
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A Back     alignment and structure
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10 Back     alignment and structure
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2 Back     alignment and structure
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus} Back     alignment and structure
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum} Back     alignment and structure
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A Back     alignment and structure
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A Back     alignment and structure
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A* Back     alignment and structure
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A Back     alignment and structure
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0 Back     alignment and structure
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A* Back     alignment and structure
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A* Back     alignment and structure
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3 Back     alignment and structure
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A Back     alignment and structure
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A Back     alignment and structure
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV} Back     alignment and structure
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A Back     alignment and structure
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale} Back     alignment and structure
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A* Back     alignment and structure
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A* Back     alignment and structure
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A* Back     alignment and structure
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A Back     alignment and structure
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A Back     alignment and structure
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} Back     alignment and structure
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A Back     alignment and structure
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10 Back     alignment and structure
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A* Back     alignment and structure
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A* Back     alignment and structure
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A Back     alignment and structure
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A* Back     alignment and structure
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4} Back     alignment and structure
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae} Back     alignment and structure
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1 Back     alignment and structure
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 564
d2vo1a1273 c.37.1.10 (A:1-273) CTP synthase PyrG, N-terminal 1e-140
d1s1ma2266 c.37.1.10 (A:1-266) CTP synthase PyrG, N-terminal 1e-132
d1vcoa2272 c.37.1.10 (A:11-282) CTP synthase PyrG, N-terminal 1e-130
d1s1ma1258 c.23.16.1 (A:287-544) CTP synthase PyrG, C-termina 5e-86
d1vcoa1250 c.23.16.1 (A:298-547) CTP synthase PyrG, C-termina 2e-85
d1l9xa_288 c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Ho 6e-16
d2abwa1218 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protei 2e-12
d1a9xb2228 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthe 6e-04
d1ihua1296 c.37.1.10 (A:1-296) Arsenite-translocating ATPase 0.002
>d2vo1a1 c.37.1.10 (A:1-273) CTP synthase PyrG, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: CTP synthase PyrG, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  404 bits (1039), Expect = e-140
 Identities = 181/272 (66%), Positives = 221/272 (81%)

Query: 1   MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFV 60
           MKY+LVTGGV+SG+GKG+ ASS+G +LK+CGL VT IKIDPY+N DAGT SP+EHGEVFV
Sbjct: 1   MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFV 60

Query: 61  LDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDE 120
           LDDGGEVDLDLGNYERF+DI+LT+DNN+TTGKIYQ VI+KERKGDYLGKTVQVVPHITD 
Sbjct: 61  LDDGGEVDLDLGNYERFLDIRLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDA 120

Query: 121 IQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHV 180
           IQ+W+ R A+IPVD       VCVIELGGT+GDIESMPFIEA  QF ++V   NFC IHV
Sbjct: 121 IQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFIEAFRQFQFKVKRENFCNIHV 180

Query: 181 SLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240
           SLVP  +  GEQKTKPTQ+SVR LRG GL+P+++ CR +  LD +VK K+S FCHV  + 
Sbjct: 181 SLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ 240

Query: 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNL 272
           +I ++DV +I+ +PLLL +Q   +   + L+L
Sbjct: 241 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDL 272
>d1s1ma2 c.37.1.10 (A:1-266) CTP synthase PyrG, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 266 Back     information, alignment and structure
>d1vcoa2 c.37.1.10 (A:11-282) CTP synthase PyrG, N-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 272 Back     information, alignment and structure
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 258 Back     information, alignment and structure
>d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 250 Back     information, alignment and structure
>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 288 Back     information, alignment and structure
>d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 218 Back     information, alignment and structure
>d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]} Length = 228 Back     information, alignment and structure
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Length = 296 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query564
d2vo1a1273 CTP synthase PyrG, N-terminal domain {Human (Homo 100.0
d1s1ma2266 CTP synthase PyrG, N-terminal domain {Escherichia 100.0
d1vcoa2272 CTP synthase PyrG, N-terminal domain {Thermus ther 100.0
d1vcoa1250 CTP synthase PyrG, C-terminal domain {Thermus ther 100.0
d1s1ma1258 CTP synthase PyrG, C-terminal domain {Escherichia 100.0
d1a9xb2228 Carbamoyl phosphate synthetase, small subunit C-te 99.96
d2a9va1196 GMP synthase subunit A, GuaAA {Archaeon Thermoplas 99.94
d1wl8a1188 GMP synthase subunit A, GuaAA {Archaeon Pyrococcus 99.94
d1i7qb_192 Anthranilate synthase GAT subunit, TrpG {Serratia 99.91
d1gpma2205 GMP synthetase {Escherichia coli [TaxId: 562]} 99.91
d1qdlb_195 Anthranilate synthase GAT subunit, TrpG {Archaeon 99.9
d1l9xa_288 gamma-glutamyl hydrolase {Human (Homo sapiens) [Ta 99.88
d1k9vf_200 GAT subunit, HisH, (or domain) of imidazoleglycero 99.87
d2nv0a1195 Hypothetical protein YaaE {Bacillus subtilis [TaxI 99.86
d2abwa1218 Pyridoxine biosynthesis protein 2, Pdx2 {Malaria p 99.85
d1jvna2232 GAT subunit, HisH, (or domain) of imidazoleglycero 99.85
d1q7ra_202 Hypothetical protein YaaE {Bacillus stearothermoph 99.85
d1o1ya_230 Hypothetical protein TM1158 {Thermotoga maritima [ 99.82
d1ka9h_195 GAT subunit, HisH, (or domain) of imidazoleglycero 99.78
d2ghra1281 Homoserine O-succinyltransferase HTS (MetA) {Bacil 99.37
d1t3ta2262 FGAM synthase PurL, amidotransferase domain {Salmo 99.07
d1a9xb1151 Carbamoyl phosphate synthetase, small subunit N-te 98.74
d1vhqa_217 Putative sigma cross-reacting protein 27A (SCRP-27 97.04
d1p80a1156 Catalase, C-terminal domain {Escherichia coli, HPI 96.98
d1g2ia_166 Intracellular protease {Archaeon Pyrococcus horiko 96.96
d1oi4a1170 Hypothetical protein YhbO {Escherichia coli [TaxId 96.91
d1byia_224 Dethiobiotin synthetase {Escherichia coli [TaxId: 96.9
d1p5fa_186 DJ-1 {Human (Homo sapiens) [TaxId: 9606]} 96.77
d1sy7a1184 Catalase, C-terminal domain {Neurospora crassa [Ta 96.51
d2fexa1188 Hypothetical protein Atu0886 {Agrobacterium tumefa 95.68
d2ab0a1195 Protein ThiJ (YajL) {Escherichia coli [TaxId: 562] 95.46
d1u9ca_221 GK2698 ortholog {Bacillus stearothermophilus [TaxI 94.49
d1cp2a_269 Nitrogenase iron protein {Clostridium pasteurianum 94.17
d1qvwa_236 Hypothetical protein Ydr533Cp {Baker's yeast (Sacc 92.39
d1xjca_165 Molybdopterin-guanine dinucleotide biosynthesis pr 92.25
d1n57a_279 HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]} 91.05
d1ihua1296 Arsenite-translocating ATPase ArsA {Escherichia co 90.8
d1nksa_194 Adenylate kinase {Archaeon Sulfolobus acidocaldari 89.91
d2jfga193 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 87.84
d1g3qa_237 Cell division regulator MinD {Archaeon Pyrococcus 84.95
d1hyqa_232 Cell division regulator MinD {Archaeon Archaeoglob 84.49
d1ihua2279 Arsenite-translocating ATPase ArsA {Escherichia co 83.03
d2afhe1289 Nitrogenase iron protein {Azotobacter vinelandii [ 82.77
d1fjha_257 3-alpha-hydroxysteroid dehydrogenase {Comamonas te 81.94
d1khta_190 Adenylate kinase {Archaeon Methanococcus voltae [T 80.32
>d2vo1a1 c.37.1.10 (A:1-273) CTP synthase PyrG, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: CTP synthase PyrG, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-142  Score=1055.88  Aligned_cols=273  Identities=66%  Similarity=1.114  Sum_probs=231.5

Q ss_pred             CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 008476            1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI   80 (564)
Q Consensus         1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtm~p~~hgev~v~~dg~e~dldlg~yerf~~~   80 (564)
                      ||||||||||+|||||||+|||||+|||+|||+|+++|+||||||||||||||||||||||+||+||||||||||||||+
T Consensus         1 mKyifVtGGV~S~lGKGi~~aSig~ll~~~g~~V~~~K~DPYlNvD~GtmsP~eHGEvfVt~DG~EtDlDlG~YERFl~~   80 (273)
T d2vo1a1           1 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDI   80 (273)
T ss_dssp             CEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSCCC----------------------------------
T ss_pred             CeEEEEeCCcccccchHHHHHHHHHHHHhCCceeEEEecccceecCCCCCCHHHHhhhheecccccccccCcchHHHhcC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 008476           81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI  160 (564)
Q Consensus        81 ~~~~~~~~t~g~iy~~vi~ker~g~ylg~tvqviph~t~~i~~~i~~~~~~p~~~~~~~~d~~i~e~ggtvgdies~pf~  160 (564)
                      +|+|+||+||||||++||+|||+|+|||||||||||||||||+||+++|.+|+|+++.+|||||||||||||||||+||+
T Consensus        81 ~l~~~~n~TtG~iy~~Vi~kER~G~yLGkTVQvIPHiTdeIk~~I~~~a~~~~~~~~~~~Di~IvEIGGTVGDIEs~pFl  160 (273)
T d2vo1a1          81 RLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFI  160 (273)
T ss_dssp             -----CEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHHSCCSSSCCCCSEEEEEECSCTTCGGGHHHH
T ss_pred             CccccccccHHHHHHHHHHHHhccccccccCCcCCCHhHHHHHHHHHhhcccccccCCCCcEEEEEcCcccccchhcHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhhhhhhhCCCcccEEEEeeCCCCCcchhccccccCCCCCCC
Q 008476          161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN  240 (564)
Q Consensus       161 ea~rq~~~~~~~~~~~~~h~~~vp~~~~~~e~ktkptq~svk~l~s~Gi~pd~lv~R~~~~l~~~~r~kisl~~~v~~~~  240 (564)
                      ||+||||+++|++|+||||||||||++++||+||||||||||+|||+|||||+|+|||+.+++++.|+||||||+|++++
T Consensus       161 EAiRQl~~e~g~~n~~~iHvtlvP~~~~~gE~KTKPTQhSVkeLrs~GIqPDilvcRse~~l~~~~k~KIslFcnV~~~~  240 (273)
T d2vo1a1         161 EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ  240 (273)
T ss_dssp             HHHHHHHHHSCGGGEEEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHTCCCSEEEEECSSCCCHHHHHHHHHHTTSCGGG
T ss_pred             HHHHHHHHHhCCcceEEEeeccccccccchhhcccchhHHHHHHHHcCCCCCeeeeccCCCCCHHHHHHHHHhcCCChhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeCCCCCcccccHHHHHhhhHHHHHHHcCCC
Q 008476          241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQ  273 (564)
Q Consensus       241 Vi~~~dvdtiy~vp~~L~~qG~~~~i~~~l~l~  273 (564)
                      ||+++|++|||+||+.|++||+++.++++|+|+
T Consensus       241 VI~~~Dv~sIYeVPl~l~~qgl~~~i~~~L~LP  273 (273)
T d2vo1a1         241 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDLP  273 (273)
T ss_dssp             EEEECCCSSGGGHHHHHHHTTHHHHHHHHHTCC
T ss_pred             EEEcCCcccHHHHHHHHHHCCcHHHHHHHcCCC
Confidence            999999999999999999999999999999985
>d1s1ma2 c.37.1.10 (A:1-266) CTP synthase PyrG, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vcoa2 c.37.1.10 (A:11-282) CTP synthase PyrG, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1i7qb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2nv0a1 c.23.16.1 (A:1-195) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1o1ya_ c.23.16.1 (A:) Hypothetical protein TM1158 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ka9h_ c.23.16.1 (H:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2ghra1 c.23.16.8 (A:17-297) Homoserine O-succinyltransferase HTS (MetA) {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1t3ta2 c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidotransferase domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1a9xb1 c.8.3.1 (B:1502-1652) Carbamoyl phosphate synthetase, small subunit N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vhqa_ c.23.16.2 (A:) Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1p80a1 c.23.16.3 (A:598-753) Catalase, C-terminal domain {Escherichia coli, HPII [TaxId: 562]} Back     information, alignment and structure
>d1g2ia_ c.23.16.2 (A:) Intracellular protease {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1oi4a1 c.23.16.2 (A:23-192) Hypothetical protein YhbO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1p5fa_ c.23.16.2 (A:) DJ-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sy7a1 c.23.16.3 (A:553-736) Catalase, C-terminal domain {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d2fexa1 c.23.16.2 (A:1-188) Hypothetical protein Atu0886 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2ab0a1 c.23.16.2 (A:2-196) Protein ThiJ (YajL) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u9ca_ c.23.16.2 (A:) GK2698 ortholog {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} Back     information, alignment and structure
>d1qvwa_ c.23.16.2 (A:) Hypothetical protein Ydr533Cp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1n57a_ c.23.16.2 (A:) HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Back     information, alignment and structure
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} Back     information, alignment and structure