Citrus Sinensis ID: 008479
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 564 | 2.2.26 [Sep-21-2011] | |||||||
| P44659 | 215 | Uncharacterized protein H | yes | no | 0.322 | 0.846 | 0.265 | 1e-13 | |
| Q8FTH8 | 739 | Thiamine biosynthesis mul | yes | no | 0.319 | 0.243 | 0.267 | 5e-11 | |
| O94266 | 551 | Putative hydroxymethylpyr | yes | no | 0.329 | 0.337 | 0.236 | 4e-09 | |
| Q9UUE0 | 274 | UPF0655 protein C17G9.12c | no | no | 0.464 | 0.956 | 0.233 | 5e-09 | |
| Q8NQH1 | 763 | Thiamine biosynthesis mul | yes | no | 0.365 | 0.269 | 0.262 | 2e-08 | |
| P25616 | 317 | UPF0655 protein YCR015C O | yes | no | 0.375 | 0.668 | 0.265 | 4e-06 | |
| Q49Z42 | 229 | Putative thiaminase-2 OS= | yes | no | 0.331 | 0.816 | 0.233 | 2e-05 | |
| Q2YUL0 | 229 | Putative thiaminase-2 OS= | yes | no | 0.319 | 0.786 | 0.248 | 2e-05 | |
| Q6GEY1 | 229 | Putative thiaminase-2 OS= | yes | no | 0.326 | 0.803 | 0.241 | 2e-05 | |
| Q7A0C8 | 229 | Putative thiaminase-2 OS= | yes | no | 0.326 | 0.803 | 0.241 | 4e-05 |
| >sp|P44659|Y358_HAEIN Uncharacterized protein HI_0358 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0358 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 36 FTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEEL 95
F LA G L F+HY+ QD+ +L +S+A+ L A + + + + + +E+
Sbjct: 21 FVQQLAKGTLPKACFQHYLKQDYLYLFHYSRAFALGVFKAKNFAEMETPRKTLEILCQEI 80
Query: 96 KMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVA 153
++H ++ +EWG ++ T ++A + YT +LL G LA +
Sbjct: 81 QLHLNYCREWGISEQEIFTTQESAACIAYTRYLLDCGMT--------GSLAELY------ 126
Query: 154 AYTLGAMSPCMRLYA----FLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDL 209
A++PC YA ++ + + L N+PY WID Y+SE FQ +A + D
Sbjct: 127 ----AAVTPCALGYAQVARYITQHYPRL-----PNNPYQTWIDTYASEEFQQAAQETVDF 177
Query: 210 LDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
L L L +L I++++ A ++E+ F+
Sbjct: 178 LTALCKPLNPSQLAEIQQIFTTATRMEIAFW 208
|
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) |
| >sp|Q8FTH8|THIED_COREF Thiamine biosynthesis multifunctional protein ThiED OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) GN=thiED PE=3 SV=1 | Back alignment and function description |
|---|
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 33/213 (15%)
Query: 34 SPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLS-ISELRKGVL 92
S F L G L E F YI QD H+L+ +S+A A D A++ + + +
Sbjct: 545 SGFIRGLGDGTLSREEFLFYIDQDAHYLRQYSRALATLSSRAPDAPAQVDWATSAAECIT 604
Query: 93 EELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKV 152
E ++H +++ + G ++ + T+ YT+FL+A ++
Sbjct: 605 VEAELHRTYLNK-GLAETGVSAPSPVTMAYTDFLIA--------------------RSHA 643
Query: 153 AAYTLGAMS--PCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLL 210
Y +GA + PC LYA +G L N HPYT W+D YS E F A ++ +
Sbjct: 644 DDYVVGAAAVLPCYWLYAEIGL---ILAKQNHPEHPYTDWLDTYSGEGFLAGTVKA---I 697
Query: 211 DKLSVSLTGEELD---IIEKLYHQAMKLEVEFF 240
++ ++ G D + + Y A E EFF
Sbjct: 698 ARVEAAMAGAGPDQQRVAAQTYLSACVHEREFF 730
|
Catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP, and of HMP to HMP-P. Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) (taxid: 196164) EC: 2 EC: . EC: 7 EC: . EC: 4 EC: . EC: 7 |
| >sp|O94266|THI22_SCHPO Putative hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP8B7.18c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 36 FTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEEL 95
FT LA G L L F+ Y+ QD+ +L F++AY L + L ++ V+EE
Sbjct: 345 FTNMLAKGTLPLPAFQDYLKQDYLYLVNFARAYSLKGYKENTFPNILEAAQSVIHVIEEK 404
Query: 96 KMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVA 153
++H S +G L + + + A Y+ ++L T + + VA
Sbjct: 405 ELHVSMCSSYGVSLQDLKSCEESPACTAYSRYILDTGAAQ-----------------DVA 447
Query: 154 AYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKL 213
A +PC+ Y + N PY KW+DNY E + ++ + ++++
Sbjct: 448 ALDF-VQAPCLIGYYVIAARLMKEPFRNPQG-PYQKWVDNYFCEDYLSAVRRGCRQIEEI 505
Query: 214 SVSLTGEELDIIEKLYHQAMKLEVEFF 240
+ L+ E + + +++ +A K E F+
Sbjct: 506 VLKLSPERIQELIEIFIRATKFETLFW 532
|
Catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP, and of HMP to HMP-P. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 7 EC: . EC: 4 EC: . EC: 7 |
| >sp|Q9UUE0|YNZC_SCHPO UPF0655 protein C17G9.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC17G9.12c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 126/312 (40%), Gaps = 50/312 (16%)
Query: 264 LIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYT 323
++ DFD T T D+ +LAE N+PE W ++S +Y
Sbjct: 1 MLYIVDFDETITTYDTIHLLAEAV---------NKPEE-------------WSVISDKYW 38
Query: 324 EEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG 383
+EY E+ S + ++ L + E+ + R+ +S G++ +
Sbjct: 39 QEYLAWREALPHSTTLTSY-----LPLLGGSRYLEEASIKRIEKSQYFSGLSEGALDNIV 93
Query: 384 ERLSLQDGCTTFFQKVVKNENLNANV-HVLSYCWCGDLIRASF---SSAGLNALNVHANE 439
+ ++L+ G F +V + ++ + HVLS W +I + + + L VHAN+
Sbjct: 94 QLITLRAGFVEFINALVPDLRVSKTIFHVLSVNWSARVIEQTLLHHTDLTADLLCVHAND 153
Query: 440 FSFKESIST--GEIIEKVESPI-----DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLC 492
F F S +T G I+ + S + DKV+ F ++ VYIGDS D C
Sbjct: 154 FDFDTSTNTTNGRILARNASSLLMNSTDKVREFRRIVQTDAVSSPLNVVYIGDSPTDFGC 213
Query: 493 LLEADIGIVIGSSSSLRRVGSQF-GVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTV 551
L + I I++ S+ + S+F V + + V+K I+YT
Sbjct: 214 LQISPISILMRSNQKYYDILSRFEDVQLVDISEFPVQKA-----------VPGKKIIYTC 262
Query: 552 SSWAEVHAFILG 563
S W + L
Sbjct: 263 SDWCAIQKAFLA 274
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q8NQH1|THIED_CORGL Thiamine biosynthesis multifunctional protein ThiED OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=theD PE=3 SV=2 | Back alignment and function description |
|---|
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 97/240 (40%), Gaps = 34/240 (14%)
Query: 7 KSPSPEEEG---LARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKA 63
KSP+P E R LW S F L G L+ F YI QD +L
Sbjct: 538 KSPAPRIEPAGPFTRALWEASGDIIAGINSSDFITMLGDGTLRRPEFDFYIDQDAQYLAQ 597
Query: 64 FSQAYELAEECADDDDAKLSISE-LRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKY 122
+S+A A D A++ ++ + ++ E ++H S++ G +++ + + T+ Y
Sbjct: 598 YSRALARLSSIAPDSHAQIEWAQSAAECLVVEAELHRSYMA--GKEVSAPSHI---TMAY 652
Query: 123 TEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLG--AMSPCMRLYAFLGKEFHALLNA 180
T+FL+A +T Y G A+ PC LYA +G L
Sbjct: 653 TDFLIA--------------------RTYTEDYVCGVAAVLPCYWLYAEIGL---MLAEQ 689
Query: 181 NEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
N HPY W++ YS E F A L+K + E+ + + A E EFF
Sbjct: 690 NHDEHPYKDWLNTYSGEEFIAGTRAAIARLEKALENAGAEQRVDAARAFLSASVHEREFF 749
|
Catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP, and of HMP to HMP-P. Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (taxid: 196627) EC: 2 EC: . EC: 7 EC: . EC: 4 EC: . EC: 7 |
| >sp|P25616|YCQ5_YEAST UPF0655 protein YCR015C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR015C PE=3 SV=2 | Back alignment and function description |
|---|
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 48/260 (18%)
Query: 263 RLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQY 322
+ II SDFD T T VD+ +A++ + P+ L+ WG +K Y
Sbjct: 2 KTIIISDFDETITRVDTICTIAKLPYLLNPR-----------------LKPEWGHFTKTY 44
Query: 323 TEEYEQ----------CIESFMPSEKVE-NFNYETLHKALEQLSH---FEKRANSRVIES 368
+ Y + + S +P+ + NFN + L+ +H E + + + +
Sbjct: 45 MDGYHKYKYNGTRSLPLLSSGVPTIISQSNFN-KLFADELKYQNHNRVVELNSVNEITKQ 103
Query: 369 GVLKGINLEDIK-----KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA 423
+ K I+L+ +K + E L+DG TF VVK N ++ +VLS W + I
Sbjct: 104 QIFKSISLDQMKTFARDQNHEDCLLRDGFKTFCSSVVK--NFESDFYVLSINWSKEFIHE 161
Query: 424 SFSSAGLNALNVHANEF---SFKESIS-TGEIIEKVESPIDKVQAFNNTLEKY--GTDRK 477
L ++ N+ S K S S GE ++ + DKV+ L+K G +++
Sbjct: 162 VIGDRRLKNSHIFCNDLKKVSDKCSQSYNGEFDCRLLTGSDKVKILGEILDKIDSGCNKE 221
Query: 478 NLSV---YIGDSVGDLLCLL 494
S YIGDS DLL +L
Sbjct: 222 GNSCSYWYIGDSETDLLSIL 241
|
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|Q49Z42|TENA_STAS1 Putative thiaminase-2 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=tenA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 27/214 (12%)
Query: 33 YSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYEL-AEECADDDDAKLSISELRKGV 91
+ PF + GNL E + Y+ D +L F+ Y L + + +D + + +++ V
Sbjct: 20 HDPFIQGMLHGNLPTEATKFYLRADASYLNEFANIYALLIPKMGNLNDVRFLVEQIQFIV 79
Query: 92 LEELKMHD---SFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFE 148
E++ H+ +V+E ++ + + Y + + A K
Sbjct: 80 DGEVEAHEILADYVQESYNEIVQEKVWPPSGDHYIKHMYFNAYAK--------------- 124
Query: 149 KTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHP--YTKWIDNYSSESFQASALQN 206
+ AAYT+ AM+PC +Y F+ +E L E N KW + YS+E +
Sbjct: 125 --ENAAYTIAAMAPCPYVYQFIAQE---ALRDKELNKDSILAKWFEFYSTE-MDELVIVF 178
Query: 207 EDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
++L+DKL+ + +E + I++ + Q+ E FF
Sbjct: 179 DNLMDKLTKHCSEKEKNEIKQCFLQSTVHERNFF 212
|
Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) (taxid: 342451) EC: 3 EC: . EC: 5 EC: . EC: 9 EC: 9 EC: . EC: 2 |
| >sp|Q2YUL0|TENA_STAAB Putative thiaminase-2 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=tenA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 43 GNLKLETFRHYIAQDFHFLKAFSQAYEL-AEECADDDDAKLSISELRKGVLEELKMHDSF 101
GN++ + RHY+ D +LK F+ Y L + +D K + ++ V E+ HD
Sbjct: 30 GNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEVLAHDI- 88
Query: 102 VKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMS 161
LA++ + + T+F + ++ + + A YT+ AM+
Sbjct: 89 -------LAQIVGESYEEIINTKFWPPSGDHYIKHMYFQA------HSRENAIYTIAAMA 135
Query: 162 PCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDLLDKLSVSLTG 219
PC +YA L K + N KW D YS+E + N E L++KL+ S++
Sbjct: 136 PCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFEALMNKLAESMSD 191
Query: 220 EELDIIEKLYHQAMKLEVEFF 240
+EL+ +++++ ++ E FF
Sbjct: 192 KELEQVKQVFLESCIHERRFF 212
|
Staphylococcus aureus (strain bovine RF122 / ET3-1) (taxid: 273036) EC: 3 EC: . EC: 5 EC: . EC: 9 EC: 9 EC: . EC: 2 |
| >sp|Q6GEY1|TENA_STAAR Putative thiaminase-2 OS=Staphylococcus aureus (strain MRSA252) GN=tenA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 27/211 (12%)
Query: 36 FTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYE-LAEECADDDDAKLSISELRKGVLEE 94
F + GN++ + RHY+ D +LK F+ Y L + +D K + ++ V E
Sbjct: 23 FIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGE 82
Query: 95 LKMHD---SFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTK 151
+ HD V E ++ K + Y + + A + +
Sbjct: 83 VLAHDILAQIVGESYEEIIKTKVWPPSGDHYIKHMYFQAHSRENAI-------------- 128
Query: 152 VAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDL 209
YT+ AM+PC +YA L K + N KW D YS+E + N E L
Sbjct: 129 ---YTIAAMAPCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFESL 181
Query: 210 LDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
++KL+ S++ +EL+ +++++ ++ E FF
Sbjct: 182 MNKLAESMSDKELEQVKQVFLESCIHERRFF 212
|
Staphylococcus aureus (strain MRSA252) (taxid: 282458) EC: 3 EC: . EC: 5 EC: . EC: 9 EC: 9 EC: . EC: 2 |
| >sp|Q7A0C8|TENA_STAAW Putative thiaminase-2 OS=Staphylococcus aureus (strain MW2) GN=tenA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 27/211 (12%)
Query: 36 FTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYE-LAEECADDDDAKLSISELRKGVLEE 94
F + SG++ + RHY+ D +LK F+ Y L + +D K + ++ V E
Sbjct: 23 FIQKMLSGDIGADALRHYLKADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGE 82
Query: 95 LKMHD---SFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTK 151
+ HD V E ++ K + Y + + A + +
Sbjct: 83 VLAHDILAQIVGESYEEIIKTKVWPPSGDHYIKHMYFQAHSRENAI-------------- 128
Query: 152 VAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDL 209
YT+ AM+PC +YA L K + N KW D YS+E + N E L
Sbjct: 129 ---YTIAAMAPCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFEAL 181
Query: 210 LDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
++KL+ S++ +EL+ +++++ ++ E FF
Sbjct: 182 MNKLAESMSDKELEQVKQVFLESCIHERRFF 212
|
Staphylococcus aureus (strain MW2) (taxid: 196620) EC: 3 EC: . EC: 5 EC: . EC: 9 EC: 9 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 564 | ||||||
| 225466287 | 566 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.996 | 0.793 | 0.0 | |
| 296088278 | 657 | unnamed protein product [Vitis vinifera] | 1.0 | 0.858 | 0.793 | 0.0 | |
| 118486577 | 618 | unknown [Populus trichocarpa] | 0.992 | 0.906 | 0.767 | 0.0 | |
| 356576723 | 607 | PREDICTED: uncharacterized protein LOC10 | 0.976 | 0.907 | 0.782 | 0.0 | |
| 356535194 | 604 | PREDICTED: uncharacterized protein LOC10 | 0.998 | 0.932 | 0.767 | 0.0 | |
| 224125750 | 577 | predicted protein [Populus trichocarpa] | 0.975 | 0.953 | 0.782 | 0.0 | |
| 224145849 | 541 | predicted protein [Populus trichocarpa] | 0.929 | 0.968 | 0.759 | 0.0 | |
| 297805028 | 617 | hypothetical protein ARALYDRAFT_915614 [ | 0.984 | 0.899 | 0.709 | 0.0 | |
| 145358529 | 617 | heme oxygenase-like, multi-helical prote | 0.978 | 0.894 | 0.712 | 0.0 | |
| 110737432 | 629 | hypothetical protein [Arabidopsis thalia | 0.978 | 0.877 | 0.712 | 0.0 |
| >gi|225466287|ref|XP_002270291.1| PREDICTED: uncharacterized protein LOC100266835 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/566 (79%), Positives = 506/566 (89%), Gaps = 2/566 (0%)
Query: 1 MAAIPPKSPSP--EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDF 58
MAAIP S + EEG+ARR WIKF++ES+FAMY+PF VCLASGNLKL++FRH+IAQD
Sbjct: 1 MAAIPKPSITTVDNEEGIARRFWIKFRKESIFAMYTPFVVCLASGNLKLDSFRHFIAQDV 60
Query: 59 HFLKAFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSA 118
HFL+AF+QAYELAEECADDDDAKL I +LRK VLEELKMHDSFVKEWG DL+K +++NSA
Sbjct: 61 HFLRAFAQAYELAEECADDDDAKLGICQLRKSVLEELKMHDSFVKEWGFDLSKESSLNSA 120
Query: 119 TVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALL 178
TVKY +FLLATASGK+EGVKGPGKLATPFEKTKVAAYTLGAM+PCMRLYAFLGKE ALL
Sbjct: 121 TVKYRDFLLATASGKIEGVKGPGKLATPFEKTKVAAYTLGAMTPCMRLYAFLGKELQALL 180
Query: 179 NANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVE 238
+ +E HPY KWIDNYSSE FQ SALQ EDLLDKLSVSLTGEELDIIEKLY+QAMKLE+E
Sbjct: 181 HPSESTHPYKKWIDNYSSEGFQGSALQTEDLLDKLSVSLTGEELDIIEKLYYQAMKLEIE 240
Query: 239 FFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQ 298
FFCAQ L Q T+VPL KGH+PA DRL+IFSDFDLTCT+VDSSAILAEIAI+TAPK DQNQ
Sbjct: 241 FFCAQLLDQYTIVPLTKGHDPAADRLVIFSDFDLTCTVVDSSAILAEIAIITAPKFDQNQ 300
Query: 299 PENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFE 358
PENQ+ RMSS +LRNTWG+LSKQYTEEYEQCIE+ +PSEKVE F+YE L KALEQLS FE
Sbjct: 301 PENQIIRMSSADLRNTWGVLSKQYTEEYEQCIENILPSEKVEEFDYEGLCKALEQLSDFE 360
Query: 359 KRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG 418
KRANSRVIESGVLKG+NL+DIK+AGERL LQDGC +FFQ +VKNE+L A+VH+LSYCWCG
Sbjct: 361 KRANSRVIESGVLKGLNLDDIKRAGERLILQDGCASFFQNIVKNESLIADVHILSYCWCG 420
Query: 419 DLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKN 478
DLIR++FSS GL+ LNVHANEF+FKESIS GEI++ VESPIDK++AF N LE DRKN
Sbjct: 421 DLIRSAFSSGGLHVLNVHANEFAFKESISNGEIVKNVESPIDKLKAFLNILENCSNDRKN 480
Query: 479 LSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSS 538
L+VYIGDSVGDLLCLL AD+GIVIGSSSSL+RVGSQFGV+F+PL+ LVKKQKEY EGSS
Sbjct: 481 LTVYIGDSVGDLLCLLNADVGIVIGSSSSLKRVGSQFGVSFVPLFRFLVKKQKEYVEGSS 540
Query: 539 SNWKEKSGILYTVSSWAEVHAFILGW 564
S WK SG LYTVSSWAE+HAFILGW
Sbjct: 541 SRWKGLSGTLYTVSSWAEIHAFILGW 566
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296088278|emb|CBI36504.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/566 (79%), Positives = 506/566 (89%), Gaps = 2/566 (0%)
Query: 1 MAAIPPKSPSP--EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDF 58
MAAIP S + EEG+ARR WIKF++ES+FAMY+PF VCLASGNLKL++FRH+IAQD
Sbjct: 92 MAAIPKPSITTVDNEEGIARRFWIKFRKESIFAMYTPFVVCLASGNLKLDSFRHFIAQDV 151
Query: 59 HFLKAFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSA 118
HFL+AF+QAYELAEECADDDDAKL I +LRK VLEELKMHDSFVKEWG DL+K +++NSA
Sbjct: 152 HFLRAFAQAYELAEECADDDDAKLGICQLRKSVLEELKMHDSFVKEWGFDLSKESSLNSA 211
Query: 119 TVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALL 178
TVKY +FLLATASGK+EGVKGPGKLATPFEKTKVAAYTLGAM+PCMRLYAFLGKE ALL
Sbjct: 212 TVKYRDFLLATASGKIEGVKGPGKLATPFEKTKVAAYTLGAMTPCMRLYAFLGKELQALL 271
Query: 179 NANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVE 238
+ +E HPY KWIDNYSSE FQ SALQ EDLLDKLSVSLTGEELDIIEKLY+QAMKLE+E
Sbjct: 272 HPSESTHPYKKWIDNYSSEGFQGSALQTEDLLDKLSVSLTGEELDIIEKLYYQAMKLEIE 331
Query: 239 FFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQ 298
FFCAQ L Q T+VPL KGH+PA DRL+IFSDFDLTCT+VDSSAILAEIAI+TAPK DQNQ
Sbjct: 332 FFCAQLLDQYTIVPLTKGHDPAADRLVIFSDFDLTCTVVDSSAILAEIAIITAPKFDQNQ 391
Query: 299 PENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFE 358
PENQ+ RMSS +LRNTWG+LSKQYTEEYEQCIE+ +PSEKVE F+YE L KALEQLS FE
Sbjct: 392 PENQIIRMSSADLRNTWGVLSKQYTEEYEQCIENILPSEKVEEFDYEGLCKALEQLSDFE 451
Query: 359 KRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG 418
KRANSRVIESGVLKG+NL+DIK+AGERL LQDGC +FFQ +VKNE+L A+VH+LSYCWCG
Sbjct: 452 KRANSRVIESGVLKGLNLDDIKRAGERLILQDGCASFFQNIVKNESLIADVHILSYCWCG 511
Query: 419 DLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKN 478
DLIR++FSS GL+ LNVHANEF+FKESIS GEI++ VESPIDK++AF N LE DRKN
Sbjct: 512 DLIRSAFSSGGLHVLNVHANEFAFKESISNGEIVKNVESPIDKLKAFLNILENCSNDRKN 571
Query: 479 LSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSS 538
L+VYIGDSVGDLLCLL AD+GIVIGSSSSL+RVGSQFGV+F+PL+ LVKKQKEY EGSS
Sbjct: 572 LTVYIGDSVGDLLCLLNADVGIVIGSSSSLKRVGSQFGVSFVPLFRFLVKKQKEYVEGSS 631
Query: 539 SNWKEKSGILYTVSSWAEVHAFILGW 564
S WK SG LYTVSSWAE+HAFILGW
Sbjct: 632 SRWKGLSGTLYTVSSWAEIHAFILGW 657
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118486577|gb|ABK95127.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/576 (76%), Positives = 504/576 (87%), Gaps = 16/576 (2%)
Query: 3 AIPPKS----PSPE----------EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLE 48
AIPP+S PS EEGLA + WIKF+RESVFAMY+PF + LASG LK++
Sbjct: 45 AIPPRSIASAPSCTTTSGRSNINIEEGLASKFWIKFRRESVFAMYTPFVISLASGTLKID 104
Query: 49 TFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTD 108
+FRHYI+QD HFLK+F+ A+ELAEECADDD+AKL+ISELRKGVLEELKMH+SFV+EWG D
Sbjct: 105 SFRHYISQDSHFLKSFAHAFELAEECADDDEAKLAISELRKGVLEELKMHNSFVQEWGID 164
Query: 109 LAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYA 168
K T+NSATVKYT+FLLATASGKVEGVKG GKLATPFE+TKVAAYTLGAM+PCMRLY+
Sbjct: 165 PGKEGTINSATVKYTDFLLATASGKVEGVKGLGKLATPFERTKVAAYTLGAMTPCMRLYS 224
Query: 169 FLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKL 228
FLGKE A+L+ E HPY KWID+YSSESFQASALQ EDLLDKLSVSLTGEELDIIEKL
Sbjct: 225 FLGKELQAVLDPEEDGHPYKKWIDSYSSESFQASALQTEDLLDKLSVSLTGEELDIIEKL 284
Query: 229 YHQAMKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAI 288
YHQAMKLE+EFF AQP+AQ T+ PL KGHNP DRL+IFSDFDLTCT+VDSSAILAEIAI
Sbjct: 285 YHQAMKLEIEFFLAQPIAQTTLAPLTKGHNPEEDRLVIFSDFDLTCTVVDSSAILAEIAI 344
Query: 289 VTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLH 348
+TAPKSD QPE Q+ RMSS +LRNTWGLLS QYTEEYEQCIES MPS KVE FNYE L
Sbjct: 345 LTAPKSDVVQPETQIARMSSADLRNTWGLLSGQYTEEYEQCIESIMPSAKVE-FNYEALC 403
Query: 349 KALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNAN 408
KALEQLS FE+RANSRVI+SGVLKG+NLED+K+AGERL LQDGC FFQK+VKNENLN N
Sbjct: 404 KALEQLSDFERRANSRVIDSGVLKGLNLEDVKRAGERLILQDGCIGFFQKIVKNENLNTN 463
Query: 409 VHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNT 468
VHVLSYCWCGDLIR++FSS GL+ALN+HANE F+ESISTGEI++KVESP+DK QAFN+
Sbjct: 464 VHVLSYCWCGDLIRSAFSSGGLDALNIHANELIFEESISTGEIVKKVESPMDKAQAFNDI 523
Query: 469 LEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVK 528
L+ Y +DRKNL+VYIGDSVGDLLCLL+ADIGIV+GSS+SLR VGSQ+GV+F+PL+PGLV+
Sbjct: 524 LKNYSSDRKNLTVYIGDSVGDLLCLLQADIGIVVGSSASLRSVGSQYGVSFVPLFPGLVR 583
Query: 529 KQKEYTEGSSSNWKEKSGILYTVSSWAEVHAFILGW 564
KQKE ++G S NWK SGILYTVSSW+E+HAFILGW
Sbjct: 584 KQKE-SDGESPNWKGLSGILYTVSSWSEIHAFILGW 618
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356576723|ref|XP_003556479.1| PREDICTED: uncharacterized protein LOC100813450 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/551 (78%), Positives = 489/551 (88%)
Query: 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAE 72
E GLARR WIKF RES+FAMY+PF + LASGNL +++F YIAQD HFL+AF+QAYELAE
Sbjct: 56 ETGLARRFWIKFTRESIFAMYTPFVIALASGNLHIDSFHRYIAQDVHFLRAFAQAYELAE 115
Query: 73 ECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASG 132
ECADDDDAKL I ELRK VLEELKMH+S V+EWG DLAK +NSATVKYTEFLLATASG
Sbjct: 116 ECADDDDAKLGICELRKAVLEELKMHNSLVQEWGLDLAKEHGINSATVKYTEFLLATASG 175
Query: 133 KVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWID 192
K+EG+KGPGKLATPFEKTK+AAYTLGAM+PCMRLYA LGK+F LL++NE HPY KWID
Sbjct: 176 KIEGLKGPGKLATPFEKTKIAAYTLGAMTPCMRLYAVLGKKFQELLDSNESTHPYNKWID 235
Query: 193 NYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQPTVVP 252
NYSS+ FQA+ LQ EDLLDKLSVSLTGEELD+IEKLY+QAMKLE++FF AQPL QPT+VP
Sbjct: 236 NYSSDGFQATTLQTEDLLDKLSVSLTGEELDVIEKLYYQAMKLEIDFFSAQPLFQPTIVP 295
Query: 253 LIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELR 312
L KGH PA D LI+FSDFDLTCT+VDSSAILAEIAIVTAPKSDQNQPE+Q+ RM S +LR
Sbjct: 296 LTKGHKPAEDHLIVFSDFDLTCTVVDSSAILAEIAIVTAPKSDQNQPEDQIVRMLSSDLR 355
Query: 313 NTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLK 372
NTWG LSKQYTEEYEQCIES MPS+++ NF+Y+ L ALEQLS FE AN+RVIESGVLK
Sbjct: 356 NTWGFLSKQYTEEYEQCIESIMPSDRLNNFDYKELSMALEQLSKFENTANNRVIESGVLK 415
Query: 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA 432
GI+LEDIK+AGERL LQDGCT FFQ +VKNENLN+NVHVLSYCWCGDLIR++FSSA LN
Sbjct: 416 GISLEDIKRAGERLILQDGCTNFFQSIVKNENLNSNVHVLSYCWCGDLIRSAFSSADLNE 475
Query: 433 LNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLC 492
LNVHANEF+++ S+STGEI++KVESPIDKV+AF N L+ D+K L+VYIGDSVGDLLC
Sbjct: 476 LNVHANEFTYEGSVSTGEIVKKVESPIDKVEAFRNILKNCNDDKKKLTVYIGDSVGDLLC 535
Query: 493 LLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTVS 552
LLEAD+GIVIGSSSSLR VG+QFG++F+PLY GLVKKQKEY EGS+SNWK SGILYTVS
Sbjct: 536 LLEADVGIVIGSSSSLRSVGTQFGISFVPLYSGLVKKQKEYVEGSTSNWKGLSGILYTVS 595
Query: 553 SWAEVHAFILG 563
SWAEVHAFILG
Sbjct: 596 SWAEVHAFILG 606
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356535194|ref|XP_003536133.1| PREDICTED: uncharacterized protein LOC100788250 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/563 (76%), Positives = 490/563 (87%)
Query: 1 MAAIPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHF 60
MAAI S S E GLARR WIKF RES+FAMY+PF + LASGNL +++F HYIAQD HF
Sbjct: 41 MAAIHNHSNSNSETGLARRFWIKFTRESIFAMYTPFAIALASGNLHIDSFHHYIAQDVHF 100
Query: 61 LKAFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATV 120
L+AF+QAYELAEECADDDDAKL I ELRK VLEELKMH+ V+E DLAK +NSATV
Sbjct: 101 LRAFAQAYELAEECADDDDAKLGICELRKAVLEELKMHNLLVQERELDLAKEHGINSATV 160
Query: 121 KYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNA 180
KYTEFLLATASGK+EG+KGPGKLATPFEKTK+AAYTLGAM+PCMRLYA +GK+F LL++
Sbjct: 161 KYTEFLLATASGKIEGLKGPGKLATPFEKTKIAAYTLGAMTPCMRLYAVMGKKFQELLDS 220
Query: 181 NEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
NE HPY KWI+NYSS+ FQA+ LQ EDLLDKLSVSLTGEELD+IEKLY+QAMKLE+EFF
Sbjct: 221 NESTHPYNKWINNYSSDGFQATTLQTEDLLDKLSVSLTGEELDVIEKLYYQAMKLEIEFF 280
Query: 241 CAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPE 300
AQPL QPT+VPL KGH P D LIIFSDFDLTCT+VDSSAILAEIAIVTAPKSDQNQPE
Sbjct: 281 SAQPLFQPTIVPLTKGHKPVEDHLIIFSDFDLTCTVVDSSAILAEIAIVTAPKSDQNQPE 340
Query: 301 NQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKR 360
+Q+ RM S +LRNTWG LSKQYTEEYEQCIES MP +++ NF+Y+ L ALEQLS FE
Sbjct: 341 DQIVRMLSSDLRNTWGFLSKQYTEEYEQCIESIMPPDRLNNFDYKELSMALEQLSKFENT 400
Query: 361 ANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420
AN+RVIESGVLKGI+LEDIK+AGERL LQDGC FFQ +VKNENLNANVHVLSYCWCGDL
Sbjct: 401 ANNRVIESGVLKGISLEDIKRAGERLILQDGCPNFFQSIVKNENLNANVHVLSYCWCGDL 460
Query: 421 IRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLS 480
IR++FSSA LN LNVHANEF+++ S+STGEI++KVESPIDKV+AF N L+ D+K L+
Sbjct: 461 IRSTFSSADLNELNVHANEFTYEGSVSTGEIVKKVESPIDKVEAFRNILKNCNDDKKKLT 520
Query: 481 VYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSN 540
VYIGDSVGDLLCLLEAD+GIVIGSSSSLR VG+QFG++F+PLY GLVKKQKEY EGS+S+
Sbjct: 521 VYIGDSVGDLLCLLEADVGIVIGSSSSLRSVGTQFGISFVPLYSGLVKKQKEYVEGSTSD 580
Query: 541 WKEKSGILYTVSSWAEVHAFILG 563
WK SGILYTVSSWAEVHAFILG
Sbjct: 581 WKGLSGILYTVSSWAEVHAFILG 603
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224125750|ref|XP_002319666.1| predicted protein [Populus trichocarpa] gi|222858042|gb|EEE95589.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/552 (78%), Positives = 488/552 (88%), Gaps = 2/552 (0%)
Query: 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAE 72
EEGLA + WIKF+RESVF+MY+PF + LASG LK+++FR Y++QD HFLK+F+ A+ELAE
Sbjct: 28 EEGLASKFWIKFRRESVFSMYTPFIISLASGTLKIDSFRQYLSQDSHFLKSFAHAFELAE 87
Query: 73 ECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASG 132
ECADDD+AKL+ SELRKGVLEELKM +SFV+EWGTD K TVNSATVKYT+FLLATASG
Sbjct: 88 ECADDDEAKLATSELRKGVLEELKMQNSFVQEWGTDPGKERTVNSATVKYTDFLLATASG 147
Query: 133 KVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWID 192
KVEGVKGPGKLATPFE+TKVAAYTL AM+PCMRLY+FLGKE ALL+ + HPY KWID
Sbjct: 148 KVEGVKGPGKLATPFERTKVAAYTLAAMTPCMRLYSFLGKELQALLDPEDDRHPYKKWID 207
Query: 193 NYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQPTVVP 252
+YSSESFQASALQ EDLLDKLSVSLT EELDIIEKLYHQAMKLE++FF AQPLAQPTV P
Sbjct: 208 SYSSESFQASALQTEDLLDKLSVSLTSEELDIIEKLYHQAMKLEIDFFLAQPLAQPTVAP 267
Query: 253 LIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELR 312
L KGHNPA DRL+IFSDFDLTCT+VDSSAILAEIAIVTAPKSD Q E Q+ RMSS +LR
Sbjct: 268 LTKGHNPAEDRLVIFSDFDLTCTVVDSSAILAEIAIVTAPKSDVVQSEAQIARMSSADLR 327
Query: 313 NTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLK 372
NTW LLS QYTEEYEQCIES MPS+KVE FNYE L KALEQL FE+R NSRVIES VLK
Sbjct: 328 NTWDLLSGQYTEEYEQCIESIMPSKKVE-FNYEALCKALEQLLDFERRVNSRVIESEVLK 386
Query: 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA 432
G+NLED+K+AGERL LQDGCT+FFQK+V NENLN NVHVLSYCWCGDLIR++FSS GL+
Sbjct: 387 GLNLEDVKRAGERLILQDGCTSFFQKIVNNENLNTNVHVLSYCWCGDLIRSAFSSGGLD- 445
Query: 433 LNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLC 492
+NVHANE F ESISTGEI++KVESP+DK QAFN+ L+ Y DRKNL+VYIGDSVGDLLC
Sbjct: 446 VNVHANELIFDESISTGEIVKKVESPLDKAQAFNDILKNYSNDRKNLTVYIGDSVGDLLC 505
Query: 493 LLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTVS 552
LL+ADIGIV+GSS+SLR+VGSQFGV+F+PL+PGLV+KQKE SS NWK SGILYTVS
Sbjct: 506 LLKADIGIVVGSSASLRKVGSQFGVSFVPLFPGLVRKQKESDGESSPNWKGLSGILYTVS 565
Query: 553 SWAEVHAFILGW 564
SWAE+HAFILGW
Sbjct: 566 SWAEIHAFILGW 577
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224145849|ref|XP_002325785.1| predicted protein [Populus trichocarpa] gi|222862660|gb|EEF00167.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/552 (75%), Positives = 474/552 (85%), Gaps = 28/552 (5%)
Query: 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAE 72
EEGLA + WIKF+RESVFAMY+PF + LASG LK+++FRHYI+QD HFLK+F+ A+ELAE
Sbjct: 18 EEGLASKFWIKFRRESVFAMYTPFVISLASGTLKIDSFRHYISQDSHFLKSFAHAFELAE 77
Query: 73 ECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASG 132
ECADDD+AKL+ISELRKGVLEELKMH+SFV+EWG D K T+NSATVKYT+FLLATASG
Sbjct: 78 ECADDDEAKLAISELRKGVLEELKMHNSFVQEWGIDPGKEGTINSATVKYTDFLLATASG 137
Query: 133 KVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWID 192
KVEGVKG GKLATPFE+TKVAAYTLGAM+PCMRLY+FLGKE A+L+ E HPY KWID
Sbjct: 138 KVEGVKGLGKLATPFERTKVAAYTLGAMTPCMRLYSFLGKELQAVLDPEEDGHPYKKWID 197
Query: 193 NYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQPTVVP 252
+YSSESFQASALQ EDLLDKLSVSLTGEELDIIEKLYHQAMKLE+EFF AQP+AQ T+ P
Sbjct: 198 SYSSESFQASALQTEDLLDKLSVSLTGEELDIIEKLYHQAMKLEIEFFLAQPIAQTTLAP 257
Query: 253 LIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELR 312
L KGHNP DRL+IFSDFDLTCT+VDSSAILAEIAI+TAPKSD QPE Q+ RMSS +LR
Sbjct: 258 LTKGHNPEEDRLVIFSDFDLTCTVVDSSAILAEIAILTAPKSDVVQPETQIARMSSADLR 317
Query: 313 NTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLK 372
NTWGLLS QYTEEYEQCIES MPS KVE FNYE L KALEQLS FE+RANSRVI+SGVLK
Sbjct: 318 NTWGLLSGQYTEEYEQCIESIMPSAKVE-FNYEALCKALEQLSDFERRANSRVIDSGVLK 376
Query: 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA 432
G+NLED+K+AGERL LQDGC FFQK+VKNENLN NVHVLSYCWCGDLIR++FSS GL+A
Sbjct: 377 GLNLEDVKRAGERLILQDGCIGFFQKIVKNENLNTNVHVLSYCWCGDLIRSAFSSGGLDA 436
Query: 433 LNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLC 492
LN+HANE F+ESISTGEI NL+VYIGDSVGDLLC
Sbjct: 437 LNIHANELIFEESISTGEI--------------------------NLTVYIGDSVGDLLC 470
Query: 493 LLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTVS 552
LL+ADIGIV+GSS+SLR VGSQ+GV+F+PL+PGLV+KQKE ++G S NWK SGILYTVS
Sbjct: 471 LLQADIGIVVGSSASLRSVGSQYGVSFVPLFPGLVRKQKE-SDGESPNWKGLSGILYTVS 529
Query: 553 SWAEVHAFILGW 564
SW+E+HAFILGW
Sbjct: 530 SWSEIHAFILGW 541
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297805028|ref|XP_002870398.1| hypothetical protein ARALYDRAFT_915614 [Arabidopsis lyrata subsp. lyrata] gi|297316234|gb|EFH46657.1| hypothetical protein ARALYDRAFT_915614 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/565 (70%), Positives = 472/565 (83%), Gaps = 10/565 (1%)
Query: 4 IPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKA 63
IPP S E+ L +LWIKF RE +F++YSPF VCLA+GNLK++TFR YIAQD HFLKA
Sbjct: 58 IPPNS----EDALPGKLWIKFNRECLFSIYSPFAVCLAAGNLKIDTFRQYIAQDVHFLKA 113
Query: 64 FSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYT 123
F+ AYELA ECADDDD KL+IS+LRK V+EELKMH+SFV++W D+ K +VNSAT++YT
Sbjct: 114 FAHAYELAAECADDDDDKLAISDLRKSVMEELKMHNSFVQDWDLDINKEVSVNSATLRYT 173
Query: 124 EFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEG 183
EFLLATASGKVEG K PG L TPFEKTKVAAYTLGA++PCMRLYAFLGKEF ALL+ ++
Sbjct: 174 EFLLATASGKVEGCKAPGMLDTPFEKTKVAAYTLGAVTPCMRLYAFLGKEFGALLDLSDV 233
Query: 184 NHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243
HPY KWIDNYSS++FQASA Q EDLL+KLSVS+TGEELDIIEKLY QAMKLEVEFF AQ
Sbjct: 234 THPYKKWIDNYSSDAFQASAKQTEDLLEKLSVSMTGEELDIIEKLYQQAMKLEVEFFHAQ 293
Query: 244 PLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQL 303
PL QPT+VPL+K N + D L+IFSDFDLTCT+VDSSAILAEIAIVTAPK +Q++ Q+
Sbjct: 294 PLVQPTIVPLVK--NRSKDDLVIFSDFDLTCTVVDSSAILAEIAIVTAPKDEQSRSGQQI 351
Query: 304 GRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANS 363
RM S +L+NTW LLSKQYTE YE+CIE+ + EK + F+YE L KALEQLS FEK AN+
Sbjct: 352 QRMLSSDLKNTWNLLSKQYTEHYEECIENILNKEKADKFDYEGLCKALEQLSDFEKEANN 411
Query: 364 RVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA 423
RVIESGVLKG+NLEDIK+AGERL LQDGC FQK++K ENLNA +HVLSYCWCGDLIRA
Sbjct: 412 RVIESGVLKGLNLEDIKRAGERLILQDGCINVFQKILKTENLNAELHVLSYCWCGDLIRA 471
Query: 424 SFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKN---LS 480
+F + G++A+ VHANEF+F+ESISTGEI KVESPI+K Q F + L+ + K LS
Sbjct: 472 AFCAGGVDAVEVHANEFTFEESISTGEIERKVESPINKAQQFKSILQNRKDENKKKSFLS 531
Query: 481 VYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYT-EGSSS 539
VYIGDSVGDLLCLLEADIGIV+ SSSSLRRVGS FGV+F+PL+ G+V+KQK++T E SSS
Sbjct: 532 VYIGDSVGDLLCLLEADIGIVVSSSSSLRRVGSHFGVSFVPLFSGIVQKQKQHTEEESSS 591
Query: 540 NWKEKSGILYTVSSWAEVHAFILGW 564
WK SG LYTVSSWAE+H+F LGW
Sbjct: 592 TWKGLSGTLYTVSSWAEIHSFALGW 616
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|145358529|ref|NP_198287.3| heme oxygenase-like, multi-helical protein [Arabidopsis thaliana] gi|332006501|gb|AED93884.1| heme oxygenase-like, multi-helical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/570 (71%), Positives = 479/570 (84%), Gaps = 18/570 (3%)
Query: 3 AIPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLK 62
+IPP S EE L +LWIKF RE +F++YSPF VCLA+GNLK++TFR YIAQD HFLK
Sbjct: 57 SIPPTS----EEALPGKLWIKFNRECLFSIYSPFAVCLAAGNLKIDTFRQYIAQDVHFLK 112
Query: 63 AFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKY 122
AF+ AYELA +CADDDD KL+IS+LRK V+EELKMHDSFV++W D+ K +VNSAT++Y
Sbjct: 113 AFAHAYELAADCADDDDDKLAISDLRKSVMEELKMHDSFVQDWDLDINKEVSVNSATLRY 172
Query: 123 TEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANE 182
TEFLLATASGKVEG K PG L TPFEKTKVAAYTLGA++PCMRLYAFLGKEF +LL+ ++
Sbjct: 173 TEFLLATASGKVEGCKAPGMLDTPFEKTKVAAYTLGAVTPCMRLYAFLGKEFGSLLDLSD 232
Query: 183 GNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCA 242
NHPY KWIDNYSS++FQASA Q EDLL+KLSVS+TGEELDIIEKLY QAMKLEVEFF A
Sbjct: 233 VNHPYKKWIDNYSSDAFQASAKQTEDLLEKLSVSMTGEELDIIEKLYQQAMKLEVEFFHA 292
Query: 243 QPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQ 302
QPLAQPT+VPL+K H + D L+IFSDFDLTCT+VDSSAILAEIAIVTAPK +Q++ Q
Sbjct: 293 QPLAQPTIVPLLKNH--SKDDLVIFSDFDLTCTVVDSSAILAEIAIVTAPKDEQSRSGQQ 350
Query: 303 LGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRAN 362
+ RM S +L+NTW LLSKQYTE YE+CIES + +K + F+YE L KALEQLS FEK AN
Sbjct: 351 IHRMLSSDLKNTWNLLSKQYTEHYEECIESILNKKKADKFDYEGLCKALEQLSDFEKEAN 410
Query: 363 SRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIR 422
+RVIESGVLKG+NLEDIK+AGERL LQDGC FQK++K ENLNA +HVLSYCWCGDLIR
Sbjct: 411 NRVIESGVLKGLNLEDIKRAGERLILQDGCINVFQKILKTENLNAELHVLSYCWCGDLIR 470
Query: 423 ASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKN---- 478
A+FS+ G++A+ VHANEF+F+ESISTGEI KVESPI+K Q F + L+ +RKN
Sbjct: 471 AAFSAGGVDAVEVHANEFTFEESISTGEIERKVESPINKAQQFKSILQ----NRKNENNK 526
Query: 479 ---LSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTE 535
LSVYIGDSVGDLLCLLEADIGIV+ SSSSLRRVGS FGV+F+PL+ G+V+KQK++TE
Sbjct: 527 KSFLSVYIGDSVGDLLCLLEADIGIVVSSSSSLRRVGSHFGVSFVPLFSGIVQKQKQHTE 586
Query: 536 GSSSN-WKEKSGILYTVSSWAEVHAFILGW 564
SSS+ WK SG LYTVSSWAE+H+F LGW
Sbjct: 587 ESSSSAWKGLSGTLYTVSSWAEIHSFALGW 616
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|110737432|dbj|BAF00660.1| hypothetical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/570 (71%), Positives = 479/570 (84%), Gaps = 18/570 (3%)
Query: 3 AIPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLK 62
+IPP S EE L +LWIKF RE +F++YSPF VCLA+GNLK++TFR YIAQD HFLK
Sbjct: 69 SIPPTS----EEALPGKLWIKFNRECLFSIYSPFAVCLAAGNLKIDTFRQYIAQDVHFLK 124
Query: 63 AFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKY 122
AF+ AYELA +CADDDD KL+IS+LRK V+EELKMHDSFV++W D+ K +VNSAT++Y
Sbjct: 125 AFAHAYELAADCADDDDDKLAISDLRKSVMEELKMHDSFVQDWDLDINKEVSVNSATLRY 184
Query: 123 TEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANE 182
TEFLLATASGKVEG K PG L TPFEKTKVAAYTLGA++PCMRLYAFLGKEF +LL+ ++
Sbjct: 185 TEFLLATASGKVEGCKAPGMLDTPFEKTKVAAYTLGAVTPCMRLYAFLGKEFGSLLDLSD 244
Query: 183 GNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCA 242
NHPY KWIDNYSS++FQASA Q EDLL+KLSVS+TGEELDIIEKLY QAMKLEVEFF A
Sbjct: 245 VNHPYKKWIDNYSSDAFQASAKQTEDLLEKLSVSMTGEELDIIEKLYQQAMKLEVEFFHA 304
Query: 243 QPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQ 302
QPLAQPT+VPL+K H + D L+IFSDFDLTCT+VDSSAILAEIAIVTAPK +Q++ Q
Sbjct: 305 QPLAQPTIVPLLKNH--SKDDLVIFSDFDLTCTVVDSSAILAEIAIVTAPKDEQSRSGQQ 362
Query: 303 LGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRAN 362
+ RM S +L+NTW LLSKQYTE YE+CIES + +K + F+YE L KALEQLS FEK AN
Sbjct: 363 IHRMLSSDLKNTWNLLSKQYTEHYEECIESILNKKKADKFDYEGLCKALEQLSDFEKEAN 422
Query: 363 SRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIR 422
+RVIESGVLKG+NLEDIK+AGERL LQDGC FQK++K ENLNA +HVLSYCWCGDLIR
Sbjct: 423 NRVIESGVLKGLNLEDIKRAGERLILQDGCINVFQKILKTENLNAELHVLSYCWCGDLIR 482
Query: 423 ASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKN---- 478
A+FS+ G++A+ VHANEF+F+ESISTGEI KVESPI+K Q F + L+ +RKN
Sbjct: 483 AAFSAGGVDAVEVHANEFTFEESISTGEIERKVESPINKAQQFKSILQ----NRKNENNK 538
Query: 479 ---LSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTE 535
LSVYIGDSVGDLLCLLEADIGIV+ SSSSLRRVGS FGV+F+PL+ G+V+KQK++TE
Sbjct: 539 KSFLSVYIGDSVGDLLCLLEADIGIVVSSSSSLRRVGSHFGVSFVPLFSGIVQKQKQHTE 598
Query: 536 GSSSN-WKEKSGILYTVSSWAEVHAFILGW 564
SSS+ WK SG LYTVSSWAE+H+F LGW
Sbjct: 599 ESSSSAWKGLSGTLYTVSSWAEIHSFALGW 628
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 564 | ||||||
| TAIR|locus:2145816 | 617 | AT5G32470 "AT5G32470" [Arabido | 0.985 | 0.901 | 0.696 | 3.1e-209 | |
| UNIPROTKB|G4MTS1 | 304 | MGG_04762 "Uncharacterized pro | 0.413 | 0.766 | 0.256 | 8.5e-10 | |
| TIGR_CMR|BA_0725 | 231 | BA_0725 "transcriptional activ | 0.331 | 0.809 | 0.229 | 1.1e-09 | |
| POMBASE|SPBC17G9.12c | 274 | SPBC17G9.12c "hydrolase (predi | 0.460 | 0.948 | 0.257 | 1.2e-07 | |
| UNIPROTKB|Q5HW25 | 221 | CJE0491 "TenA/Thi-4 family pro | 0.338 | 0.864 | 0.231 | 1.5e-07 | |
| TIGR_CMR|CJE_0491 | 221 | CJE_0491 "TenA/Thi-4 family pr | 0.338 | 0.864 | 0.231 | 1.5e-07 | |
| ASPGD|ASPL0000004890 | 510 | AN10762 [Emericella nidulans ( | 0.349 | 0.386 | 0.216 | 7.9e-06 | |
| SGD|S000000608 | 317 | YCR015C "Putative protein of u | 0.402 | 0.716 | 0.267 | 1.9e-05 | |
| CGD|CAL0004824 | 288 | orf19.6732 [Candida albicans ( | 0.324 | 0.635 | 0.252 | 2.6e-05 | |
| POMBASE|SPBP8B7.18c | 551 | SPBP8B7.18c "TENA/THI family p | 0.173 | 0.177 | 0.26 | 7.9e-05 |
| TAIR|locus:2145816 AT5G32470 "AT5G32470" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2023 (717.2 bits), Expect = 3.1e-209, P = 3.1e-209
Identities = 394/566 (69%), Positives = 468/566 (82%)
Query: 3 AIPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLK 62
+IPP S EE L +LWIKF RE +F++YSPF VCLA+GNLK++TFR YIAQD HFLK
Sbjct: 57 SIPPTS----EEALPGKLWIKFNRECLFSIYSPFAVCLAAGNLKIDTFRQYIAQDVHFLK 112
Query: 63 AFSQXXXXXXXXXXXXXXKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKY 122
AF+ KL+IS+LRK V+EELKMHDSFV++W D+ K +VNSAT++Y
Sbjct: 113 AFAHAYELAADCADDDDDKLAISDLRKSVMEELKMHDSFVQDWDLDINKEVSVNSATLRY 172
Query: 123 TEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANE 182
TEFLLATASGKVEG K PG L TPFEKTKVAAYTLGA++PCMRLYAFLGKEF +LL+ ++
Sbjct: 173 TEFLLATASGKVEGCKAPGMLDTPFEKTKVAAYTLGAVTPCMRLYAFLGKEFGSLLDLSD 232
Query: 183 GNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCA 242
NHPY KWIDNYSS++FQASA Q EDLL+KLSVS+TGEELDIIEKLY QAMKLEVEFF A
Sbjct: 233 VNHPYKKWIDNYSSDAFQASAKQTEDLLEKLSVSMTGEELDIIEKLYQQAMKLEVEFFHA 292
Query: 243 QPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQ 302
QPLAQPT+VPL+K H+ D L+IFSDFDLTCT+VDSSAILAEIAIVTAPK +Q++ Q
Sbjct: 293 QPLAQPTIVPLLKNHSK--DDLVIFSDFDLTCTVVDSSAILAEIAIVTAPKDEQSRSGQQ 350
Query: 303 LGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRAN 362
+ RM S +L+NTW LLSKQYTE YE+CIES + +K + F+YE L KALEQLS FEK AN
Sbjct: 351 IHRMLSSDLKNTWNLLSKQYTEHYEECIESILNKKKADKFDYEGLCKALEQLSDFEKEAN 410
Query: 363 SRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIR 422
+RVIESGVLKG+NLEDIK+AGERL LQDGC FQK++K ENLNA +HVLSYCWCGDLIR
Sbjct: 411 NRVIESGVLKGLNLEDIKRAGERLILQDGCINVFQKILKTENLNAELHVLSYCWCGDLIR 470
Query: 423 ASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLE--KYGTDRKN-L 479
A+FS+ G++A+ VHANEF+F+ESISTGEI KVESPI+K Q F + L+ K ++K+ L
Sbjct: 471 AAFSAGGVDAVEVHANEFTFEESISTGEIERKVESPINKAQQFKSILQNRKNENNKKSFL 530
Query: 480 SVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSS 539
SVYIGDSVGDLLCLLEADIGIV+ SSSSLRRVGS FGV+F+PL+ G+V+KQK++TE SSS
Sbjct: 531 SVYIGDSVGDLLCLLEADIGIVVSSSSSLRRVGSHFGVSFVPLFSGIVQKQKQHTEESSS 590
Query: 540 N-WKEKSGILYTVSSWAEVHAFILGW 564
+ WK SG LYTVSSWAE+H+F LGW
Sbjct: 591 SAWKGLSGTLYTVSSWAEIHSFALGW 616
|
|
| UNIPROTKB|G4MTS1 MGG_04762 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 168 (64.2 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 68/265 (25%), Positives = 115/265 (43%)
Query: 269 DFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQ 328
DFD T DS L E + K Q+ +L TW + Y +++
Sbjct: 6 DFDGTIIAKDSINCLGEFGVSHQQKHRQH------------DLSPTWKQIVSDYLADHKM 53
Query: 329 CIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSL 388
+ ++ P+E + ++ L L H + ++ +RV ++ + +G +D+ AG R ++
Sbjct: 54 HVSAYSPAE-ADRLTHDDERAFLHSLQHVDVKSLARVADARIFEGCTADDLYGAG-REAV 111
Query: 389 QDGCTT----FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSF 442
+ G F + V A + +LS W IR S G + + +V +NE +
Sbjct: 112 RTGKVAARGGFAEFVAVMRGAGATLSILSVNWSASFIRGVLSQCGDDVVIEDVVSNEITA 171
Query: 443 KESIST-GEIIEKVESP----IDKVQAFNNTLEKYGTDRKNLS----VYIGDSVGDLLCL 493
I GE +P + K++A +D +S +Y GDS DL CL
Sbjct: 172 DGKIGCLGEGGGAQGTPMMTSLHKLEALR-ARSAASSDENEISSKITIYFGDSTTDLECL 230
Query: 494 LEADIGIVIGS--SSSLRRVGSQFG 516
L ADIGIV+ + +SSL R ++ G
Sbjct: 231 LAADIGIVMANDENSSLLRALARLG 255
|
|
| TIGR_CMR|BA_0725 BA_0725 "transcriptional activator TenA, putative" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 160 (61.4 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 48/209 (22%), Positives = 97/209 (46%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQXXXXXXXXXXXXXXKLSISELRKGVLE- 93
PF V + G L+ + F++YI QD+ +L +++ +E G+L
Sbjct: 22 PFVVGMGDGTLEKDKFQYYIIQDYLYLLDYAKLYAIGVVKATNPQVMGKFAEQIDGILNG 81
Query: 94 ELKMHDSFVKEWGTDLAKM--ATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTK 151
E+ +H + K G + ++ A ++ + YT ++++ + G LA
Sbjct: 82 EMTIHKQYAKRLGISIEEIESAKPSAKNLAYTNYMMSVSQN--------GTLAE------ 127
Query: 152 VAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLD 211
+ A+ PCM Y +GK + + A + + +WI YSSE + + DLL+
Sbjct: 128 ----LIAALLPCMWSYWEIGKRLNDIPGARDHEF-FGEWIQGYSSEEYGNLCIWLIDLLN 182
Query: 212 KLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+++V + +ELD +E+++ + + E F+
Sbjct: 183 EMAVGKSEKELDRLEEIFLYSSRFEYLFW 211
|
|
| POMBASE|SPBC17G9.12c SPBC17G9.12c "hydrolase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 80/311 (25%), Positives = 132/311 (42%)
Query: 264 LIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYT 323
++ DFD T T D+ +LAE A+ N+PE W ++S +Y
Sbjct: 1 MLYIVDFDETITTYDTIHLLAE-AV--------NKPEE-------------WSVISDKYW 38
Query: 324 EEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG 383
+EY E+ S + + Y L L + E+ + R+ +S G++ +
Sbjct: 39 QEYLAWREALPHSTTLTS--YLPL---LGGSRYLEEASIKRIEKSQYFSGLSEGALDNIV 93
Query: 384 ERLSLQDGCTTFFQKVVKNENLNANV-HVLSYCWCGDLIRASF-SSAGLNA--LNVHANE 439
+ ++L+ G F +V + ++ + HVLS W +I + L A L VHAN+
Sbjct: 94 QLITLRAGFVEFINALVPDLRVSKTIFHVLSVNWSARVIEQTLLHHTDLTADLLCVHAND 153
Query: 440 FSFKESIST--GEIIEKVESPI-----DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLC 492
F F S +T G I+ + S + DKV+ F ++ VYIGDS D C
Sbjct: 154 FDFDTSTNTTNGRILARNASSLLMNSTDKVREFRRIVQTDAVSSPLNVVYIGDSPTDFGC 213
Query: 493 LLEADIGIVIGSSSSLRRVGSQF-GVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTV 551
L + I I++ S+ + S+F V + + V+K G I+YT
Sbjct: 214 LQISPISILMRSNQKYYDILSRFEDVQLVDISEFPVQKA---VPGKK--------IIYTC 262
Query: 552 SSWAEVH-AFI 561
S W + AF+
Sbjct: 263 SDWCAIQKAFL 273
|
|
| UNIPROTKB|Q5HW25 CJE0491 "TenA/Thi-4 family protein" [Campylobacter jejuni RM1221 (taxid:195099)] | Back alignment and assigned GO terms |
|---|
Score = 143 (55.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 49/212 (23%), Positives = 93/212 (43%)
Query: 32 MYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQXXXXXXXXXXXXXXKLSISELRKGV 91
++ F L +LK E F Y+ QD+ +L +++ + + +
Sbjct: 18 LHHDFVKKLEDKSLKQENFLFYLKQDYIYLLNYAKCYARLALNSNTAKELRFAMKFQNYI 77
Query: 92 LE-ELKMHDSFVKEW-GTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEK 149
+E E+++H + + D + + + Y+ ++L+ G G F
Sbjct: 78 VEGEMELHRAILSLGINADELDIKDESLVNIAYSRYMLSV------GENGD------FLD 125
Query: 150 TKVAAYTLGAMSPCMRLYAFLGKEF-HALLNANEGNHPYTKWIDNYSSESFQASALQNED 208
VA +S C YA +G E + L N N +HPY +WI Y SE+FQ A + ED
Sbjct: 126 MLVA------LSACAIGYAKIGAEIINRLKNENLKDHPYKEWILTYGSENFQNEAKEFED 179
Query: 209 LLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
++ + S+ ++ + +++H +LEV F+
Sbjct: 180 FVNSYTSSVGAQKFQKLSEIFHTVTRLEVAFW 211
|
|
| TIGR_CMR|CJE_0491 CJE_0491 "TenA/Thi-4 family protein" [Campylobacter jejuni RM1221 (taxid:195099)] | Back alignment and assigned GO terms |
|---|
Score = 143 (55.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 49/212 (23%), Positives = 93/212 (43%)
Query: 32 MYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQXXXXXXXXXXXXXXKLSISELRKGV 91
++ F L +LK E F Y+ QD+ +L +++ + + +
Sbjct: 18 LHHDFVKKLEDKSLKQENFLFYLKQDYIYLLNYAKCYARLALNSNTAKELRFAMKFQNYI 77
Query: 92 LE-ELKMHDSFVKEW-GTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEK 149
+E E+++H + + D + + + Y+ ++L+ G G F
Sbjct: 78 VEGEMELHRAILSLGINADELDIKDESLVNIAYSRYMLSV------GENGD------FLD 125
Query: 150 TKVAAYTLGAMSPCMRLYAFLGKEF-HALLNANEGNHPYTKWIDNYSSESFQASALQNED 208
VA +S C YA +G E + L N N +HPY +WI Y SE+FQ A + ED
Sbjct: 126 MLVA------LSACAIGYAKIGAEIINRLKNENLKDHPYKEWILTYGSENFQNEAKEFED 179
Query: 209 LLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
++ + S+ ++ + +++H +LEV F+
Sbjct: 180 FVNSYTSSVGAQKFQKLSEIFHTVTRLEVAFW 211
|
|
| ASPGD|ASPL0000004890 AN10762 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 137 (53.3 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 47/217 (21%), Positives = 97/217 (44%)
Query: 27 ESVFAMYSP--FTVCLASGNLKLETFRHYIAQDFHFLKAFSQXXXXXXXXXXXXXXKLSI 84
+SV+ ++ F + L SG L +E F+ Y+ QD+ +L F++ +
Sbjct: 302 QSVWKRFTEHEFVLGLGSGTLPVERFKEYLVQDYLYLVQFARSNALASYKAKDMESIAAS 361
Query: 85 SELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLA 144
+++ + +E +H + +G +M V T TA + + G+ +
Sbjct: 362 AKIVLHIQQETALHIDYCASFGLSKEEMEKVPETTA-------CTAYSRY--ILDVGQ-S 411
Query: 145 TPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNA-NEGNHPYTKWIDNYSSESFQASA 203
+ +V A++PC+ Y + + HA EGN Y KWI+NY +E + +
Sbjct: 412 EDWLALQV------ALAPCLIGYGAIAQRLHAEEKTLREGNR-YWKWIENYVAEDYTEAV 464
Query: 204 LQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+LL+ ++ ++ + K++ +A +LE+ F+
Sbjct: 465 RLGSELLETHMRKVSLSRMEELVKIFIKATELEIMFW 501
|
|
| SGD|S000000608 YCR015C "Putative protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 70/262 (26%), Positives = 114/262 (43%)
Query: 263 RLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTW--GLLSK 320
+ II SDFD T T VD+ +A++ + P+ +PE G T+ G
Sbjct: 2 KTIIISDFDETITRVDTICTIAKLPYLLNPRL---KPE-------WGHFTKTYMDGYHKY 51
Query: 321 QYTEEYE-QCIESFMPSE-KVENFNYETLHKALEQLSH---FEKRANSRVIESGVLKGIN 375
+Y + S +P+ NFN + L+ +H E + + + + + K I+
Sbjct: 52 KYNGTRSLPLLSSGVPTIISQSNFN-KLFADELKYQNHNRVVELNSVNEITKQQIFKSIS 110
Query: 376 LEDIKKAG-----ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL 430
L+ +K E L+DG TF VVKN ++ +VLS W + I L
Sbjct: 111 LDQMKTFARDQNHEDCLLRDGFKTFCSSVVKN--FESDFYVLSINWSKEFIHEVIGDRRL 168
Query: 431 NALNVHANEF---SFKESIS-TGEIIEKVESPIDKVQAFNNTLEKY--GTDRKNLSV--- 481
++ N+ S K S S GE ++ + DKV+ L+K G +++ S
Sbjct: 169 KNSHIFCNDLKKVSDKCSQSYNGEFDCRLLTGSDKVKILGEILDKIDSGCNKEGNSCSYW 228
Query: 482 YIGDSVGDLLCLLEADI-GIVI 502
YIGDS DLL +L G+++
Sbjct: 229 YIGDSETDLLSILHPSTNGVLL 250
|
|
| CGD|CAL0004824 orf19.6732 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 51/202 (25%), Positives = 93/202 (46%)
Query: 320 KQYTEEYEQCIESF-MPSE---KVENFNYETLH-KALEQLSHFEKRANSRVIESGVLKGI 374
+ Y + Y SF P+ +E +Y + K ++LS E ++ + +S + +G+
Sbjct: 61 ESYNQNYTNLKNSFNFPNTTTTSIECSDYLSQQIKFQDELSTVENQSIELIEQSKIFEGL 120
Query: 375 NLEDIKKA----GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL 430
+D + ++ L+ G F Q V + +NLN + ++S W I+ ++ GL
Sbjct: 121 TKKDFQDYVNINHNKIKLRPG---FSQFVKRCQNLNIPIIIVSANWTSIFIKQCLANHGL 177
Query: 431 NALNVHANEFSF-------KESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYI 483
++ NE SF K ++T + +K + I Q + +++ ++ L +YI
Sbjct: 178 AVDDIITNELSFHSDDEEAKTKMTTTGLWDKSKYTIRTSQDKLDIVKQIQEEKDGLIMYI 237
Query: 484 GDSVGDLLCLLEADIGIVIGSS 505
GDSV DLL LL D I S
Sbjct: 238 GDSVTDLLPLLNVDFPCAIKGS 259
|
|
| POMBASE|SPBP8B7.18c SPBP8B7.18c "TENA/THI family protein" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 94 (38.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 36 FTVCLASGNLKLETFRHYIAQDFHFLKAFSQXXXXXXXXXXXXXXKLSISELRKGVLEEL 95
FT LA G L L F+ Y+ QD+ +L F++ L ++ V+EE
Sbjct: 345 FTNMLAKGTLPLPAFQDYLKQDYLYLVNFARAYSLKGYKENTFPNILEAAQSVIHVIEEK 404
Query: 96 KMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATASGK 133
++H S +G L K + A Y+ ++L T + +
Sbjct: 405 ELHVSMCSSYGVSLQDLKSCEESPACTAYSRYILDTGAAQ 444
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 564 | |||
| COG0819 | 218 | COG0819, TenA, Putative transcription activator [T | 2e-37 | |
| PTZ00347 | 504 | PTZ00347, PTZ00347, phosphomethylpyrimidine kinase | 1e-24 | |
| pfam03070 | 210 | pfam03070, TENA_THI-4, TENA/THI-4/PQQC family | 8e-21 | |
| PRK14713 | 530 | PRK14713, PRK14713, multifunctional hydroxymethylp | 3e-20 | |
| TIGR04306 | 208 | TIGR04306, salvage_TenA, thiaminase II | 1e-19 | |
| PRK09517 | 755 | PRK09517, PRK09517, multifunctional thiamine-phosp | 4e-15 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 3e-05 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 4e-05 | |
| pfam12710 | 122 | pfam12710, HAD, haloacid dehalogenase-like hydrola | 5e-04 |
| >gnl|CDD|223889 COG0819, TenA, Putative transcription activator [Transcription] | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 2e-37
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADD-DDAKLSISELRKGVLE 93
PF LA G L E F+ Y+ QD+ +L F++A L A D + + ++ V
Sbjct: 22 PFVQELADGTLPREKFQFYLVQDYLYLVNFARALALLASKAPDLELMEELAKIIQFLVEG 81
Query: 94 ELKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATA-SGKVEGVKGPGKLATPFEKT 150
E+++H+ +E G L ++ + A YT +LL TA SG
Sbjct: 82 EMELHERLAEELGISLDELLKTEPSPANKAYTRYLLDTAYSGSF---------------- 125
Query: 151 KVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLL 210
A L A+ PC+ YA +GK A A+ N PY +WID Y+SE FQ + + E LL
Sbjct: 126 ---AELLAALLPCLWGYAEIGKRLKAKPRASP-NPPYQEWIDTYASEEFQEAVEELEALL 181
Query: 211 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
D L+ + + EEL+ +++++ A + E+ F+
Sbjct: 182 DSLAENSSEEELEKLKQIFLTASRFELAFW 211
|
Length = 218 |
| >gnl|CDD|240375 PTZ00347, PTZ00347, phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 1e-24
Identities = 72/231 (31%), Positives = 109/231 (47%), Gaps = 26/231 (11%)
Query: 11 PEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYEL 70
P GL+ LW + + ++ +++ PF L G L FR YIAQD +L + +
Sbjct: 8 PVFGGLSEALWKENQDLAMMSLHLPFVQGLGDGTLDQNAFRTYIAQDTLYLNGYIRILSY 67
Query: 71 AEECADDDDAKLSISELRKGVLEELK-MHDSFVKEWGTDLAKMATVNSATVKYTEFLLAT 129
+D + EL KGVLEELK H ++ D A +A KY +FLLA+
Sbjct: 68 CITKSDVTATGGGLLELLKGVLEELKNCHHHYI-----DNPDAAGPEAACRKYVDFLLAS 122
Query: 130 ASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTK 189
+ G + + A+ PC RLYA++G+E + E +HP+ +
Sbjct: 123 GNADTLG----------------PSVVIAAVIPCARLYAWVGQELTNEVELTE-SHPFRR 165
Query: 190 WIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
W+ +YS E S Q E LLDK GE + + + Y +AM+LE +FF
Sbjct: 166 WLLSYSDEPINTSVEQLESLLDKY--IRPGEFSE-VAQAYRRAMELEYDFF 213
|
Length = 504 |
| >gnl|CDD|217351 pfam03070, TENA_THI-4, TENA/THI-4/PQQC family | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 8e-21
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYE-LAEECADDDDAKLSISELRKGVLE 93
PF LA G L E F+ Y+ QD+ +LK F + LA + D + + I + +
Sbjct: 15 PFVQALAKGTLPREQFQAYLIQDYLYLKNFPRVLAILASKAPDLELRREWIDRILDHIGG 74
Query: 94 ELKMHDSFVKEWGTDLAK-MATVNSATVK-YTEFLLATASGKVEGVKGPGKLATPFEKTK 151
E+++H + G T K Y +LL A
Sbjct: 75 EIELHLRLAEALGLSREDLSKTEPLPAAKAYVNYLLDLAR------------------RG 116
Query: 152 VAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLD 211
L A+ PC+ +Y + + +N G+ Y +WID+Y SE F+++ + E LL+
Sbjct: 117 SWLEALAALLPCLFVYQEIAERLKEKINGLSGS-EYYEWIDDYGSEEFRSAVEEAERLLN 175
Query: 212 KLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
L ++ EL+ +++++ +++ E+ F+
Sbjct: 176 HLLAYVSDSELEELQEIFLTSLEFELSFW 204
|
Members of this family are found in all the three major phyla of life: archaebacteria, eubacteria, and eukaryotes. In Bacillus subtilis, TENA is one of a number of proteins that enhance the expression of extracellular enzymes, such as alkaline protease, neutral protease and levansucrase. The THI-4 protein, which is involved in thiamine biosynthesis, is also a member of this family. The C-terminal part of these proteins consistently show significant sequence similarity to TENA proteins. This similarity was first noted with the Neurospora crassa THI-4. This family includes bacterial coenzyme PQQ synthesis protein C or PQQC proteins. Pyrroloquinoline quinone (PQQ) is the prosthetic group of several bacterial enzymes,including methanol dehydrogenase of methylotrophs and the glucose dehydrogenase of a number of bacteria. PQQC has been found to be required in the synthesis of PQQ but its function is unclear. The exact molecular function of members of this family is uncertain. Length = 210 |
| >gnl|CDD|237797 PRK14713, PRK14713, multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 3e-20
Identities = 68/243 (27%), Positives = 104/243 (42%), Gaps = 29/243 (11%)
Query: 2 AAIPPKSPSPEEEG-LARRLW--IKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDF 58
+A P G LW RE++ + PF LA G L E F Y+AQD
Sbjct: 305 SAEPAPDAVVGPAGPFTAALWQASGPIREAIEDL--PFVRALADGTLPEEAFEFYLAQDA 362
Query: 59 HFLKAFSQAYELAEECADDDDAKLSISELRKGVLE-ELKMHDSFVKEWGTDLAKMATVNS 117
+L +S+A A D ++ ++ + LE E ++H S W D +
Sbjct: 363 LYLNGYSRALARLAALAPDPAEQVFWAQSAQACLEVESELHRS----WLGDRDADTAPSP 418
Query: 118 ATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHAL 177
T+ YT+FLLA A+G V AA A+ PC LYA +G E HA
Sbjct: 419 VTLAYTDFLLARAAGGSYAV--------------GAA----AVLPCFWLYAEVGAELHAR 460
Query: 178 LNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEV 237
N +HPY +W+ Y+ F A+ + +D+ + + E + + + A + E+
Sbjct: 461 A-GNPDDHPYAEWLQTYADPEFAAATRRAIAFVDRAFRAASPAERAAMARAFLTACRYEL 519
Query: 238 EFF 240
EFF
Sbjct: 520 EFF 522
|
Length = 530 |
| >gnl|CDD|213919 TIGR04306, salvage_TenA, thiaminase II | Back alignment and domain information |
|---|
Score = 87.2 bits (216), Expect = 1e-19
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECA-DDDDAKLSISELRKGVLE 93
PF + G L+ + FR YI QD+ +L +++ + L A D+D K +S ++ GV
Sbjct: 12 PFVQKIGDGTLERDKFRFYIEQDYAYLVEYAKVHALGGSKACDEDMEKELVSHIQGGVET 71
Query: 94 ELKMHDSFVKEWGT---DLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKT 150
E+ H + G + + A YT ++ +G
Sbjct: 72 EMGQHKRLAEVLGISDEEYFQKIKPGPALRSYTSYMYD------VSRRGN---------- 115
Query: 151 KVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLL 210
+ A+ PC+ Y + A E + Y KWI+ YSS F+ + + E+LL
Sbjct: 116 --WQELVAALLPCLWGYGEAATKLKGKHTAPEHSV-YHKWIETYSSSWFREAVNEGENLL 172
Query: 211 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+ L+ + + EEL+ +++++ ++ + E F+
Sbjct: 173 NHLAETSSPEELEKLKEIFAESCEYEYNFW 202
|
The TenA protein of Bacillus subtilis and Staphylococcus aurues, and the C-terminal region of trifunctional protein Thi20p from Saccharomyces cerevisiae, perform cleavages on thiamine and related compounds to produce 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP), a substrate a salvage pathway for thiamine biosynthesis. The gene symbol tenA, for Transcription ENhancement A, reflects a misleading early characterization as a regulatory protein. This family is related to PqqC from the PQQ biosynthesis system (see TIGR02111), heme oxygenase (pfam01126), and CADD (Chlamydia protein Associating with Death Domains), a putative folate metabolism enzyme (see TIGR04305). Length = 208 |
| >gnl|CDD|169939 PRK09517, PRK09517, multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Score = 78.1 bits (192), Expect = 4e-15
Identities = 51/214 (23%), Positives = 81/214 (37%), Gaps = 25/214 (11%)
Query: 34 SPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLE 93
S F L G L+ F YI QD +L+ +S+A A D A++ E + E
Sbjct: 564 SDFIRMLGDGTLRRPEFDFYIDQDAQYLRQYSRALARLSSIAPDSHAQV---EWAQSAAE 620
Query: 94 ELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVA 153
+ + + + + + + T+ YT+FL+A T+
Sbjct: 621 CIVVEAELHRSYLSGKEAPSAPSPVTMAYTDFLIARTY------------------TEDY 662
Query: 154 AYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKL 213
+ A+ PC LYA +G L N HPY W++ YS E F A ++K
Sbjct: 663 VVGVAAVLPCYWLYAEIGLM---LAEQNHDEHPYKDWLNTYSGEEFIAGTRAAIARVEKA 719
Query: 214 SVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQ 247
+ E+ + + A E EFF Q
Sbjct: 720 LENAGPEQRVDAARAFLSASVHEREFF-DQATRH 752
|
Length = 755 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 46/190 (24%), Positives = 71/190 (37%), Gaps = 18/190 (9%)
Query: 326 YEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGER 385
+ I+ VE E +A+ F+ RV +LKG+ +E +K+ E
Sbjct: 27 NAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERV---ALLKGLPVELLKEVREN 83
Query: 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKES 445
L L +G + V + V V+S G + A L AN ++
Sbjct: 84 LPLTEGAE---ELVKTLKEKGYKVAVIS---GGFDLFAEHVKDKLGLDAAFANRLEVEDG 137
Query: 446 ISTGEIIEKVESPIDKVQAFNNTL----EKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 501
TG VE PI TL K G +N +V +GD DL + A +GI
Sbjct: 138 KLTG----LVEGPIVDASYKGKTLLILLRKEGISPEN-TVAVGDGANDLSMIKAAGLGIA 192
Query: 502 IGSSSSLRRV 511
+ L++
Sbjct: 193 FNAKPKLQQK 202
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 4e-05
Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Query: 420 LIRASFS------SAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYG 473
+I F+ + L V ANE + TG ++ + K +A + G
Sbjct: 98 IISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELG 157
Query: 474 TDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRV 511
+ +V GDS DL L A + I + LR +
Sbjct: 158 IPLEE-TVAYGDSANDLPMLEAAGLPIAVNPKPKLRAL 194
|
Length = 212 |
| >gnl|CDD|221729 pfam12710, HAD, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 5e-04
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 7/89 (7%)
Query: 405 LNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464
L V ++S L+R + G++ +NV E E++ + K A
Sbjct: 40 LLELVVIVSGS-PEPLVRPVAKALGIDDVNVVGTEL---ENVLVDGRLTGKLDGEGKAAA 95
Query: 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCL 493
+K G V +GDS+ DL L
Sbjct: 96 LKRLAQKIGRYP---VVAVGDSISDLPAL 121
|
Length = 122 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 564 | |||
| COG0819 | 218 | TenA Putative transcription activator [Transcripti | 100.0 | |
| PRK14713 | 530 | multifunctional hydroxymethylpyrimidine phosphokin | 100.0 | |
| PRK09517 | 755 | multifunctional thiamine-phosphate pyrophosphoryla | 100.0 | |
| PTZ00347 | 504 | phosphomethylpyrimidine kinase; Provisional | 100.0 | |
| PF03070 | 210 | TENA_THI-4: TENA/THI-4/PQQC family; InterPro: IPR0 | 100.0 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.96 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 99.93 | |
| KOG2598 | 523 | consensus Phosphomethylpyrimidine kinase [Coenzyme | 99.92 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.92 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.9 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.89 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.88 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 99.88 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.87 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 99.87 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.84 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.83 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.83 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.82 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.82 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.81 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.76 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.76 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.74 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.74 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.73 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.61 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.59 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 99.4 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.16 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.07 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.0 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 98.97 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 98.96 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 98.96 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 98.96 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 98.92 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.88 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 98.87 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 98.87 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 98.85 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 98.82 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 98.81 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 98.78 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 98.77 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 98.76 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 98.74 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 98.74 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 98.72 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 98.72 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 98.67 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 98.67 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 98.67 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 98.65 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 98.61 | |
| PRK05157 | 246 | pyrroloquinoline quinone biosynthesis protein PqqC | 98.6 | |
| PLN02940 | 382 | riboflavin kinase | 98.6 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 98.59 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.57 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 98.53 | |
| TIGR02111 | 239 | PQQ_syn_pqqC coenzyme PQQ biosynthesis protein C. | 98.53 | |
| COG5424 | 242 | Pyrroloquinoline quinone (Coenzyme PQQ) biosynthes | 98.52 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 98.48 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 98.47 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 98.44 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 98.44 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 98.44 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 98.42 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 98.39 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 98.38 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 98.37 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 98.37 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.36 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 98.36 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 98.35 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 98.3 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 98.24 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 98.23 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 98.23 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 98.21 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.2 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 98.16 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.16 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.15 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 98.1 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 98.07 | |
| PLN02811 | 220 | hydrolase | 98.07 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 98.06 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.05 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 98.04 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.02 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 97.99 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 97.98 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 97.98 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 97.97 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 97.95 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 97.92 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 97.91 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 97.9 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 97.89 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 97.88 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 97.85 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.79 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 97.76 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 97.74 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 97.73 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.73 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 97.71 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 97.71 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 97.66 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 97.62 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 97.61 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 97.6 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.54 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 97.53 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.52 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 97.52 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 97.49 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 97.48 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 97.48 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 97.45 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 97.45 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 97.38 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 97.34 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 97.3 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 97.29 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 97.27 | |
| PLN02887 | 580 | hydrolase family protein | 97.26 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 97.26 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 97.22 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.17 | |
| CHL00168 | 238 | pbsA heme oxygenase; Provisional | 97.16 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.16 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 97.15 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.13 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 97.11 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 97.1 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 97.05 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 97.04 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.01 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 96.95 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 96.94 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 96.89 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.84 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 96.82 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 96.82 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.78 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 96.78 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.75 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 96.75 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 96.74 | |
| cd00232 | 203 | HemeO Heme oxygenase catalyzes the rate limiting s | 96.65 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.55 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 96.52 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 96.48 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 96.37 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.07 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 96.01 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 95.99 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 95.94 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 95.82 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 95.7 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 95.51 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 95.38 | |
| PF12981 | 231 | DUF3865: Domain of Unknown Function with PDB struc | 95.24 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 95.1 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 94.86 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 94.83 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.79 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 94.64 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.42 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 94.41 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 94.33 | |
| PLN02423 | 245 | phosphomannomutase | 94.23 | |
| PF01126 | 205 | Heme_oxygenase: Heme oxygenase; InterPro: IPR01605 | 93.59 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 92.98 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 92.7 | |
| COG5398 | 238 | Heme oxygenase [Inorganic ion transport and metabo | 92.24 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 92.11 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 91.7 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 91.68 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 91.49 | |
| PLN02580 | 384 | trehalose-phosphatase | 91.42 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 91.14 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 90.96 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 89.5 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 89.08 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 87.72 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 86.8 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 85.75 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 84.14 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 83.85 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 82.91 | |
| PF09949 | 100 | DUF2183: Uncharacterized conserved protein (DUF218 | 82.75 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 80.96 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 80.05 |
| >COG0819 TenA Putative transcription activator [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-47 Score=366.63 Aligned_cols=210 Identities=30% Similarity=0.466 Sum_probs=195.5
Q ss_pred chHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-
Q 008479 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVL- 92 (564)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i~- 92 (564)
+.|++.||+..++.|...++||||++|++||||+++|++||+|||+||.+|+|+++++++|+++.+.+..+...+..+.
T Consensus 1 ~~f~~~L~~~~~~~W~~~~~H~FV~~L~~GtL~~~~F~~YL~QDy~YL~~~~ra~~~~~~ka~~~~~~~~~~~~~~~~~~ 80 (218)
T COG0819 1 MMFSEELIRAAQPIWQKYIEHPFVQELADGTLPREKFQFYLVQDYLYLVNFARALALLASKAPDLELMEELAKIIQFLVE 80 (218)
T ss_pred CchHHHHHHHhHHHHHHHcCCHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999999999999999999999888888877766
Q ss_pred HHHHHHHHHHHHhCCCcc--cccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHH
Q 008479 93 EELKMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (564)
Q Consensus 93 ~E~~~h~~~~~~~gi~~~--~~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (564)
.|+.+|+++++++||+.+ ...+++|+|.+||+||++++. |+ ++++++||+||+|+|++
T Consensus 81 ~E~~~h~~~~~~lgis~~~~~~~~~~~~~~aYt~ym~~~~~~g~-------------------~~~~~aAl~PC~~~Y~e 141 (218)
T COG0819 81 GEMELHERLAEELGISLDELLKTEPSPANKAYTRYLLDTAYSGS-------------------FAELLAALLPCLWGYAE 141 (218)
T ss_pred HHHHHHHHHHHHhCCCHHHHHhcCCCchHHHHHHHHHHHHhcCC-------------------HHHHHHHHHHHHHHHHH
Confidence 599999999999999974 257899999999999999996 54 36899999999999999
Q ss_pred HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 170 LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 170 i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
||+++..... ..++++|++||++|+|++|.+.|.+++++||+++...+++++++|.++|.+++++|.+||+++
T Consensus 142 ig~~~~~~~~-~~~~~~Y~~Wi~~Y~s~ef~~~v~~~~~~ld~~~~~~~~~~~~~l~~iF~~ss~~E~~Fwd~a 214 (218)
T COG0819 142 IGKRLKAKPR-ASPNPPYQEWIDTYASEEFQEAVEELEALLDSLAENSSEEELEKLKQIFLTASRFELAFWDMA 214 (218)
T ss_pred HHHHHHhccc-cCCCCcHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988653 347899999999999999999999999999999999999999999999999999999999998
|
|
| >PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=381.89 Aligned_cols=214 Identities=27% Similarity=0.435 Sum_probs=194.0
Q ss_pred CCCcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 008479 10 SPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK 89 (564)
Q Consensus 10 ~~~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~ 89 (564)
+.++++|+++||+...+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.+++.++...+.
T Consensus 314 ~~~~~~fs~~L~~~~~~~w~~~~~HpFv~~L~~GtL~~~~F~~Yl~QD~~yL~~~~r~~a~~~aka~~~e~~~~~~~~~~ 393 (530)
T PRK14713 314 VGPAGPFTAALWQASGPIREAIEDLPFVRALADGTLPEEAFEFYLAQDALYLNGYSRALARLAALAPDPAEQVFWAQSAQ 393 (530)
T ss_pred CCCCccHHHHHHHhhHHHHHHHHcChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 34667899999999999999999999999999999999999999999999999999999999999999999988877766
Q ss_pred HH-HHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHH
Q 008479 90 GV-LEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYA 168 (564)
Q Consensus 90 ~i-~~E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~ 168 (564)
.+ .+|+++|+.++++||++ .+++|+|++|++||++++..+. ++++++||+||+|+|.
T Consensus 394 ~~~~~E~~~h~~~~~~~~~~----~~~~p~~~aY~~~l~~~a~~~~------------------~~~~l~AllPC~~~Y~ 451 (530)
T PRK14713 394 ACLEVESELHRSWLGDRDAD----TAPSPVTLAYTDFLLARAAGGS------------------YAVGAAAVLPCFWLYA 451 (530)
T ss_pred HHHHHHHHHHHHHHHHhCcc----CCCChHHHHHHHHHHHHHhcCC------------------HHHHHHHHHhHHHHHH
Confidence 55 57999999999999873 6789999999999999986332 3689999999999999
Q ss_pred HHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 008479 169 FLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQ 247 (564)
Q Consensus 169 ~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a~~~~ 247 (564)
+||+++..... ..++++|++||++|++++|.+.|.++++++|++++.++++++++|+++|+++|+||++|||++ +++
T Consensus 452 ~ig~~l~~~~~-~~~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~s~~~~~~~~~~F~~a~~~E~~Fwd~A-~~~ 528 (530)
T PRK14713 452 EVGAELHARAG-NPDDHPYAEWLQTYADPEFAAATRRAIAFVDRAFRAASPAERAAMARAFLTACRYELEFFDQA-RRR 528 (530)
T ss_pred HHHHHHHhhcc-CCCCChHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-hcc
Confidence 99999875311 235789999999999999999999999999999999999999999999999999999999999 554
|
|
| >PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=386.82 Aligned_cols=216 Identities=24% Similarity=0.349 Sum_probs=194.5
Q ss_pred CCCCCCCcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 008479 6 PKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSIS 85 (564)
Q Consensus 6 ~~~~~~~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~ 85 (564)
++....++.+|+++||+...+.|...++||||++|++||||.++|++||+|||+||.+|+|+++++++|++|.+++.++.
T Consensus 536 ~~~~~~~~~~f~~~L~~~~~~~w~~~~~HPFv~~L~~GtL~~e~F~~YL~QD~~YL~~yar~~a~~~aka~~~~~~~~~~ 615 (755)
T PRK09517 536 PAPRIEPAGPFTRALWEASGDIIAEINDSDFIRMLGDGTLRRPEFDFYIDQDAQYLRQYSRALARLSSIAPDSHAQVEWA 615 (755)
T ss_pred cccccCCCCChHHHHHHHhHHHHHHHhcChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 34445566789999999999999999999999999999999999999999999999999999999999999988877777
Q ss_pred HHHH-HHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHH
Q 008479 86 ELRK-GVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCM 164 (564)
Q Consensus 86 ~~~~-~i~~E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~ 164 (564)
..+. .+.+|+++|+++++.+|+ +.+++|+|.+|++||++++..+. ++++++||+||+
T Consensus 616 ~~~~~~~~~E~~~h~~~~~~~~~----~~~~~p~~~aYt~~l~~~a~~g~------------------~~~~laAllPC~ 673 (755)
T PRK09517 616 QSAAECIVVEAELHRSYLSGKEA----PSAPSPVTMAYTDFLIARTYTED------------------YVVGVAAVLPCY 673 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCc----CCCCChHHHHHHHHHHHHHhcCC------------------HHHHHHHHHHHH
Confidence 6655 456799999999999986 35789999999999999986332 368999999999
Q ss_pred HHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008479 165 RLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQP 244 (564)
Q Consensus 165 ~~Y~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a~ 244 (564)
|+|.+||+++.+.. .++++|++||++|++++|.++|.++++++|++++.++++++++|+++|+++|+||++||||+
T Consensus 674 w~Y~~ig~~l~~~~---~~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~s~~~~~~l~~~F~~a~~lE~~Fwd~A- 749 (755)
T PRK09517 674 WLYAEIGLMLAEQN---HDEHPYKDWLNTYSGEEFIAGTRAAIARVEKALENAGPEQRVDAARAFLSASVHEREFFDQA- 749 (755)
T ss_pred HHHHHHHHHHHhcc---CCCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 99999999997632 25679999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 008479 245 LAQ 247 (564)
Q Consensus 245 ~~~ 247 (564)
+++
T Consensus 750 ~~~ 752 (755)
T PRK09517 750 TRH 752 (755)
T ss_pred Hhc
Confidence 554
|
|
| >PTZ00347 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=369.80 Aligned_cols=234 Identities=30% Similarity=0.483 Sum_probs=196.6
Q ss_pred CCCcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 008479 10 SPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK 89 (564)
Q Consensus 10 ~~~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~ 89 (564)
+|++++|+++||++.++.|..+++||||++|++||||+++|++||+||++||.+|+|+++++++|+++.+++.++...+.
T Consensus 7 ~~~~~~fs~~L~~~~~~~~~~~~~HpFv~~l~~GtL~~~~F~~Yl~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~~ 86 (504)
T PTZ00347 7 EPVFGGLSEALWKENQDLAMMSLHLPFVQGLGDGTLDQNAFRTYIAQDTLYLNGYIRILSYCITKSDVTATGGGLLELLK 86 (504)
T ss_pred CCCCCCHHHHHHHhHHHHHHHHhCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHH
Confidence 67888999999999999999999999999999999999999999999999999999999999999999998888887776
Q ss_pred HHH-HHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHH
Q 008479 90 GVL-EELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYA 168 (564)
Q Consensus 90 ~i~-~E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~ 168 (564)
.+. +|..+|++++.. ....+++|+|++|++||++++..+.++ ++++++||+||+|+|.
T Consensus 87 ~~~~~e~~~h~~~~~~-----~~~~~~~p~~~aY~~~l~~~a~~g~~~----------------~~~~l~Al~pC~~~Y~ 145 (504)
T PTZ00347 87 GVLEELKNCHHHYIDN-----PDAAGPEAACRKYVDFLLASGNADTLG----------------PSVVIAAVIPCARLYA 145 (504)
T ss_pred HHHHHHHHHHHHHHhh-----hhccCCCHHHHHHHHHHHHHHhcCCcc----------------hHHHHHHHHHHHHHHH
Confidence 654 577899999632 134678999999999999999643321 2689999999999999
Q ss_pred HHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 008479 169 FLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQP 248 (564)
Q Consensus 169 ~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a~~~~~ 248 (564)
+||+++..... ..++|+|++||++|++++|.+.+.++++++|+++. ++++++++++|+++|++|++||+++ +++.
T Consensus 146 ~ig~~l~~~~~-~~~~~~y~~Wi~~y~~~~f~~~~~~~~~~ld~~~~---~~~~~~~~~~F~~~~~~E~~Fw~~A-y~~~ 220 (504)
T PTZ00347 146 WVGQELTNEVE-LTESHPFRRWLLSYSDEPINTSVEQLESLLDKYIR---PGEFSEVAQAYRRAMELEYDFFDSF-GYCL 220 (504)
T ss_pred HHHHHHHhccC-CCCCChHHHHHHhcCCHHHHHHHHHHHHHHHHHhc---hhhHHHHHHHHHHHHHHHHHHhHhH-Hhhh
Confidence 99999876322 12578999999999999999999999999999974 4788899999999999999999999 6554
Q ss_pred cccccccCCCCCC-CCeEEeeccccc
Q 008479 249 TVVPLIKGHNPAG-DRLIIFSDFDLT 273 (564)
Q Consensus 249 ~~~p~~~~~~~~~-~~~lii~DFD~T 273 (564)
-||... |.. +..+.|.=.|-+
T Consensus 221 -~w~~~~---~~~~~~vLtIag~D~s 242 (504)
T PTZ00347 221 -GRPVEN---PMKIPTVLTVSGSDSG 242 (504)
T ss_pred -cccccC---CCCCCeEEEEeCcCCC
Confidence 377533 322 344555555544
|
|
| >PF03070 TENA_THI-4: TENA/THI-4/PQQC family; InterPro: IPR004305 Proteins containing this domain are found in all the three major phyla of life: archaebacteria, eubacteria, and eukaryotes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=325.63 Aligned_cols=203 Identities=35% Similarity=0.556 Sum_probs=183.7
Q ss_pred HHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHH
Q 008479 21 WIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAK-LSISELRKGVLEELKMHD 99 (564)
Q Consensus 21 w~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~-~~l~~~~~~i~~E~~~h~ 99 (564)
|++..+.|..+++||||++|++||||.++|++||+||++||.+|+|+++.+++++++.+.+ .++..+...+.+|+++|.
T Consensus 1 ~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~Yl~QD~~yl~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 80 (210)
T PF03070_consen 1 HQKAEPIWEAILNHPFVQELADGTLPKEAFRYYLIQDYHYLKHFARALALLASKAPDPEEQRELLSRLIQEIEEELELHE 80 (210)
T ss_dssp SHHTHHHHHHHHTSHHHHHHHTTESEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHCCHHHHHHhCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677777799999999999999999999999999999999999999999999999987 555566667778999999
Q ss_pred HHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 008479 100 SFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHA 176 (564)
Q Consensus 100 ~~~~~~gi~~~~--~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~i~~~~~~ 176 (564)
.+++.+|++.++ ..+|+|+|++|++||++++. ++ ++++++||+||+|+|.++|+++..
T Consensus 81 ~~~~~~gi~~~~~~~~~~~p~~~~y~~~l~~~a~~~~-------------------~~~~l~al~pc~~~Y~~~~~~~~~ 141 (210)
T PF03070_consen 81 DFAEELGISREDLENIEPSPATRAYTDFLLSLAQTGS-------------------LAEGLAALLPCEWIYAEIGKRLAE 141 (210)
T ss_dssp HHHHHTTSHHHHHHHSTC-HHHHHHHHHHHHHHHHSS-------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHhhhhhhHHHHHHHHHHHHhccCC-------------------HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999874 67899999999999999985 54 368999999999999999999987
Q ss_pred hccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 177 LLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 177 ~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
... ..++++|++||+.|++++|.+.+.++.+++|+++...+++++++|+++|+++|++|++|||++
T Consensus 142 ~~~-~~~~~~y~~wi~~y~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~E~~Fwd~a 207 (210)
T PF03070_consen 142 KLR-APEDNPYQEWIDMYASEEFEAFVEWLEELLDELAAEASDEERERLEEIFRRSCELEYDFWDAA 207 (210)
T ss_dssp HCS-TTSSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc-CCCCccHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 643 347889999999999999999999999999999988889999999999999999999999998
|
In Bacillus subtilis, TENA is one of a number of proteins that enhance the expression of extracellular enzymes, such as alkaline protease, neutral protease and levansucrase []. The THI-4 protein, which is involved in thiamine biosynthesis, also contains this domain. The C-terminal part of these proteins consistently show significant sequence similarity to TENA proteins. This similarity was first noted with the Neurospora crassa THI-4 []. The exact molecular function of this domain is uncertain.; PDB: 2RD3_D 3RM5_B 1UDD_D 1Z72_B 3HML_A 3HLX_A 3HNH_A 3DDE_B 3OQL_A 2A6B_A .... |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-28 Score=242.55 Aligned_cols=228 Identities=18% Similarity=0.279 Sum_probs=183.8
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCcccc
Q 008479 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (564)
Q Consensus 261 ~~~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~ 340 (564)
+++++||+|||.|||+.-+ .++++.. +||++....+.+++.|.++..+++++|+|+|.++
T Consensus 20 ~~~lqvisDFD~Tlt~~~~--------~~g~~~~------------s~~~~~~~~~~~~~~~~~~~~~l~~~Y~PiE~d~ 79 (277)
T TIGR01544 20 AAKLQIISDFDYTLSRFSY--------EDGKRCP------------TCHGIFDNCKLLTDECRKKLLQLKEKYYPIEVDP 79 (277)
T ss_pred hhheEEeeccCccceeeec--------CCCCCCc------------chHhHHhhCCCCCHHHHHHHHHHHhhccceecCC
Confidence 4899999999999998632 1223332 4677777788899999999999999999999999
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHhh--cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCH
Q 008479 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG 418 (564)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~ 418 (564)
.++.+++.++ |.|||+++++.+.+. +++++++.++++ ++.++||+.+|++.|+++| +|++|+|+|+ .
T Consensus 80 ~~~~~eK~~~---m~eWw~k~~~l~~~~----~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~G---Ipv~IvS~G~-~ 148 (277)
T TIGR01544 80 VLTVEEKYPY---MVEWWTKSHGLLVQQ----AFPKAKIKEIVAESDVMLKDGYENFFDKLQQHS---IPVFIFSAGI-G 148 (277)
T ss_pred CCChHHhhhH---HHHHHHHHHHHHhcC----CCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCC---CcEEEEeCCc-H
Confidence 9999999997 569999999999874 569999999997 8999999999999999999 9999999999 8
Q ss_pred HHHHHHHhhcCC--CceeEEeeceeec-CccccccccccCCCCCchHHHHHH-HHHHhC-CCCCccEEEEcCCccchhhh
Q 008479 419 DLIRASFSSAGL--NALNVHANEFSFK-ESISTGEIIEKVESPIDKVQAFNN-TLEKYG-TDRKNLSVYIGDSVGDLLCL 493 (564)
Q Consensus 419 ~~I~~~l~~~g~--~~~~I~aN~l~~~-~g~~tG~~~~~~~~g~~K~~~l~~-l~~~~~-~~~~~~viyiGDs~~Dl~~l 493 (564)
.+|+.+|++.|+ .++.|+||+|.|+ +|+++| +.++.+...+|.+.+.+ ..+..+ ...+.++|++|||.||+.|+
T Consensus 149 ~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG-~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma 227 (277)
T TIGR01544 149 NVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKG-FKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMA 227 (277)
T ss_pred HHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeC-CCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHh
Confidence 999999999887 5679999999996 689999 56677777899876654 333332 12357899999999999997
Q ss_pred hhcC-------ccEEEc-CChhHHHHHHhhCCcee
Q 008479 494 LEAD-------IGIVIG-SSSSLRRVGSQFGVTFI 520 (564)
Q Consensus 494 ~~Ad-------~giv~~-~~~~L~~~~~~~gi~~~ 520 (564)
.-.. ||++-. ....|.+|.+.+.|-++
T Consensus 228 ~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~ 262 (277)
T TIGR01544 228 DGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV 262 (277)
T ss_pred cCCCcccceEEEEecccCHHHHHHHHHHhCCEEEE
Confidence 6641 122221 11457777777776444
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-25 Score=201.21 Aligned_cols=205 Identities=19% Similarity=0.249 Sum_probs=150.2
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCccccC
Q 008479 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (564)
Q Consensus 262 ~~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~ 341 (564)
++.+|++|||||||.+|+...|..-. ...+|..+.+.++.+.
T Consensus 2 kk~vi~sDFDGTITl~Ds~~~itdtf-----------------------~~~e~k~l~~~vls~t--------------- 43 (220)
T COG4359 2 KKPVIFSDFDGTITLNDSNDYITDTF-----------------------GPGEWKALKDGVLSKT--------------- 43 (220)
T ss_pred CceEEEecCCCceEecchhHHHHhcc-----------------------CchHHHHHHHHHhhCc---------------
Confidence 57799999999999999998877633 3457776655443332
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHhh-cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 008479 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE-RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (564)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~-~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~ 420 (564)
++..+-. .+|..+ -+.+.+++.+.+. ++.++|||++|++++++++ +|++|||+|. ..|
T Consensus 44 iS~rd~~--------------g~mf~~---i~~s~~Eile~llk~i~Idp~fKef~e~ike~d---i~fiVvSsGm-~~f 102 (220)
T COG4359 44 ISFRDGF--------------GRMFGS---IHSSLEEILEFLLKDIKIDPGFKEFVEWIKEHD---IPFIVVSSGM-DPF 102 (220)
T ss_pred eeHHHHH--------------HHHHHh---cCCCHHHHHHHHHhhcccCccHHHHHHHHHHcC---CCEEEEeCCC-chH
Confidence 2222211 133221 1346777777655 6999999999999999999 9999999998 899
Q ss_pred HHHHHhhcC----CCceeEEeeceeecC-ccccccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhh
Q 008479 421 IRASFSSAG----LNALNVHANEFSFKE-SISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE 495 (564)
Q Consensus 421 I~~~l~~~g----~~~~~I~aN~l~~~~-g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~ 495 (564)
|+++++..+ +..++|++|+..+.. |-..-...+....|.||...++++.+. +..++|+|||++|+.+++.
T Consensus 103 I~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~vI~~l~e~-----~e~~fy~GDsvsDlsaakl 177 (220)
T COG4359 103 IYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSVIHELSEP-----NESIFYCGDSVSDLSAAKL 177 (220)
T ss_pred HHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchhHHHhhcC-----CceEEEecCCcccccHhhh
Confidence 999998764 444566666666642 211101123467899999999999874 4679999999999999999
Q ss_pred cCccEEEcCChhHHHHHHhhCCceeecCc--hhHHhHHhh
Q 008479 496 ADIGIVIGSSSSLRRVGSQFGVTFIPLYP--GLVKKQKEY 533 (564)
Q Consensus 496 Ad~giv~~~~~~L~~~~~~~gi~~~p~~~--~~~~~~~~~ 533 (564)
+| ++| ++..|..+|++++++|++|.+ .+++.++.+
T Consensus 178 sD--llF-AK~~L~nyc~eqn~~f~~fe~F~eIlk~iekv 214 (220)
T COG4359 178 SD--LLF-AKDDLLNYCREQNLNFLEFETFYEILKEIEKV 214 (220)
T ss_pred hh--hHh-hHHHHHHHHHHcCCCCcccccHHHHHHHHHHH
Confidence 99 566 466899999999999999986 555544443
|
|
| >KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-24 Score=218.63 Aligned_cols=208 Identities=20% Similarity=0.322 Sum_probs=186.6
Q ss_pred cchHHHHHHHH--hHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 008479 13 EEGLARRLWIK--FKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90 (564)
Q Consensus 13 ~~~~~~~lw~~--~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~ 90 (564)
.+.|...|... ..+.|...++|+|+.+++.|||+...|..|+.|||+||-+|+|+++....+.+..++++.-......
T Consensus 308 ~g~f~~yl~~hpkv~p~W~s~inh~fv~~~~~Gtl~~~~fq~~l~qdy~ylIn~ara~~v~g~ks~~i~~ie~~~~iv~~ 387 (523)
T KOG2598|consen 308 PGSFFNYLINHPKVKPKWDSYINHEFVKQLADGTLERKKFQDYLEQDYLYLINYARAHGVAGSKSPTIEDIEKEAVIVQH 387 (523)
T ss_pred cHHHHHHHhhCcccChhHHHHhhHHHHHHHhcCcccchhhHHHHHHHHHHHHHHHHHHhhhcccCCcHHHHHHHhHHHHH
Confidence 36788888764 3678888899999999999999999999999999999999999999999999999988777777778
Q ss_pred HHHHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHH
Q 008479 91 VLEELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYA 168 (564)
Q Consensus 91 i~~E~~~h~~~~~~~gi~~~~--~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~ 168 (564)
+.+|+..|.++++.+|++..+ ..+++|++++|.+|+..+++++. | .++..|+.| |.
T Consensus 388 v~~e~~~h~~l~e~~Gv~~~d~~~~~~~pa~~Aysry~~d~~~~g~------------~------~~l~~a~~p----y~ 445 (523)
T KOG2598|consen 388 VREELVQHVRLREEYGVSDPDYLSCKKGPALRAYSRYINDTGRRGN------------W------QELVIALNP----YV 445 (523)
T ss_pred HHhhccchHHHHHHhCCCchhhhhcCccHHHHHHHHHhhhhhcccC------------h------hhhhhhhch----hh
Confidence 889999999999999999874 44569999999999999997443 2 467999999 88
Q ss_pred HHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 169 FLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 169 ~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
.+..++..... +.++.+|.+|+++|++.++...++...+.++...+.+++++.+.+..+|.++|++|..||+.+
T Consensus 446 ~~l~~lk~~~~-as~g~vy~~w~e~~~~~~~~~ai~~g~~~l~~i~~~~~pe~~~~l~~i~~~~~~~Et~fw~t~ 519 (523)
T KOG2598|consen 446 FALDKLKDEIT-ASEGSVYVEWVETYSSSWYTSAIDEGERLLEHIVETLSPEKLQTLVTIFARVTEFETLFWTTA 519 (523)
T ss_pred HHHHHHHhhcc-cCCCCceeehhhhccchhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 88888877653 557899999999999999999999999999999999999999999999999999999999988
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-24 Score=210.45 Aligned_cols=199 Identities=22% Similarity=0.207 Sum_probs=166.2
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCcccc
Q 008479 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (564)
Q Consensus 261 ~~~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~ 340 (564)
+.+.+++||||+|||...+++.+++... .......++...+..
T Consensus 3 ~~~~L~vFD~D~TLi~~~~~~~~~~~~g----------------------~~~~v~~~t~~~~~~--------------- 45 (212)
T COG0560 3 RMKKLAVFDLDGTLINAELIDELARGAG----------------------VGEEVLAITERAMRG--------------- 45 (212)
T ss_pred CccceEEEecccchhhHHHHHHHHHHhC----------------------CHHHHHHHHHHHhcc---------------
Confidence 4678999999999999888888877552 222333333322222
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHhhc-CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHH
Q 008479 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGER-LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD 419 (564)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~-i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~ 419 (564)
+.+|.+.+. .++ .+++|++.+.+.+..++ +.++||+.+++++++++| +.++|||+|+ ..
T Consensus 46 ------~~~~~~~~~-------~~v---~~l~g~~~~~v~~~~~~~~~l~~ga~elv~~lk~~G---~~v~iiSgg~-~~ 105 (212)
T COG0560 46 ------ELDFEESLR-------LRV---ALLKGLPVEVLEEVREEFLRLTPGAEELVAALKAAG---AKVVIISGGF-TF 105 (212)
T ss_pred ------cccHHHHHH-------HHH---HHhCCCCHHHHHHHHHhcCcCCccHHHHHHHHHHCC---CEEEEEcCCh-HH
Confidence 112222222 344 67899999999999999 999999999999999999 9999999999 79
Q ss_pred HHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 420 LIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 420 ~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
+++++.+..|+ ..++||.+..++|++||.+.++++.+.+|..+++++..+.+.+ ...+++||||.||++|+..||.|
T Consensus 106 lv~~ia~~lg~--d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~g~~-~~~~~a~gDs~nDlpml~~ag~~ 182 (212)
T COG0560 106 LVEPIAERLGI--DYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGIP-LEETVAYGDSANDLPMLEAAGLP 182 (212)
T ss_pred HHHHHHHHhCC--chheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHHcCCC-HHHeEEEcCchhhHHHHHhCCCC
Confidence 99999999886 7899999999988999999999999999999999999988764 47899999999999999999999
Q ss_pred EEEcCChhHHHHHHhhCCce
Q 008479 500 IVIGSSSSLRRVGSQFGVTF 519 (564)
Q Consensus 500 iv~~~~~~L~~~~~~~gi~~ 519 (564)
+++++++.|.+.++..+++.
T Consensus 183 ia~n~~~~l~~~a~~~~~~~ 202 (212)
T COG0560 183 IAVNPKPKLRALADVRIWPI 202 (212)
T ss_pred eEeCcCHHHHHHHHHhcChh
Confidence 99999999999999999865
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.7e-23 Score=200.43 Aligned_cols=193 Identities=18% Similarity=0.188 Sum_probs=141.8
Q ss_pred EEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCccccCCCH
Q 008479 265 IIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNY 344 (564)
Q Consensus 265 lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~~~~ 344 (564)
+|+||||||||..||+..+++.. ..+.|..+...++.+ ++++
T Consensus 1 ~~~fDFDgTit~~d~~~~~~~~~-----------------------~~~~~~~~~~~~~~g---------------~~~~ 42 (214)
T TIGR03333 1 FIICDFDGTITNNDNIISIMKQF-----------------------APPEWEALKDGVLSK---------------TLSI 42 (214)
T ss_pred CEEeccCCCCCcchhHHHHHHHh-----------------------CcHHHHHHHHHHHcC---------------CccH
Confidence 48999999999999988777632 335676665544332 1233
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHh-hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHH
Q 008479 345 ETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG-ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA 423 (564)
Q Consensus 345 ~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~-~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~ 423 (564)
.+... ++. ..++.-..+++.+++ +.++++||+.++++.++++| ++++|+|+|. ..+|++
T Consensus 43 ~e~~~--------------~~~--~~~~~~~~~~~~~~~~~~~~l~pg~~e~l~~l~~~g---~~~~IvS~~~-~~~i~~ 102 (214)
T TIGR03333 43 QEGVG--------------RMF--GLLPSSLKEEITSFVLETAEIREGFREFVAFINEHG---IPFYVISGGM-DFFVYP 102 (214)
T ss_pred HHHHH--------------HHH--hhCCCchHHHHHHHHHhcCcccccHHHHHHHHHHCC---CeEEEECCCc-HHHHHH
Confidence 32211 111 222222345777754 46899999999999999998 9999999997 899999
Q ss_pred HHhhcCCCceeEEeeceeecCccccccccc------cCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcC
Q 008479 424 SFSSAGLNALNVHANEFSFKESISTGEIIE------KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 497 (564)
Q Consensus 424 ~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~------~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad 497 (564)
+++.++. ...|+||++.++++..++.... ...||.||..+++++... +.+++|||||.||++++..||
T Consensus 103 il~~~~~-~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~l~~~~~~-----~~~~i~iGDg~~D~~~a~~Ad 176 (214)
T TIGR03333 103 LLEGIVE-KDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSLIRKLSEP-----NDYHIVIGDSVTDVEAAKQSD 176 (214)
T ss_pred HHHhhCC-cccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHHHHHHhhc-----CCcEEEEeCCHHHHHHHHhCC
Confidence 9987643 3679999999986654443321 123489999999987742 467999999999999999999
Q ss_pred ccEEEcCChhHHHHHHhhCCceeecCc
Q 008479 498 IGIVIGSSSSLRRVGSQFGVTFIPLYP 524 (564)
Q Consensus 498 ~giv~~~~~~L~~~~~~~gi~~~p~~~ 524 (564)
+ +++ ++.|..+|++.|+++.|+.+
T Consensus 177 ~--~~a-r~~l~~~~~~~~~~~~~~~~ 200 (214)
T TIGR03333 177 L--CFA-RDYLLNECEELGLNHAPFQD 200 (214)
T ss_pred e--eEe-hHHHHHHHHHcCCCccCcCC
Confidence 4 554 44789999999999999975
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.5e-22 Score=195.06 Aligned_cols=196 Identities=19% Similarity=0.197 Sum_probs=142.6
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCccccC
Q 008479 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (564)
Q Consensus 262 ~~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~ 341 (564)
++.+|+||||||||..|+...+++-. ..+.|..+.+.|+++-
T Consensus 2 ~~~~vifDfDgTi~~~d~~~~~~~~~-----------------------~~~~~~~i~~~~~~g~--------------- 43 (219)
T PRK09552 2 MSIQIFCDFDGTITNNDNIIAIMKKF-----------------------APPEWEELKDDILSQE--------------- 43 (219)
T ss_pred CCcEEEEcCCCCCCcchhhHHHHHHh-----------------------CHHHHHHHHHHHHhCC---------------
Confidence 35699999999999999976544421 1245666666554431
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHh-hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 008479 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG-ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (564)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~-~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~ 420 (564)
+++.+- +. ++. ..+.+...+++.+.. +++.++||+.++++.++++| +++.|+|+|+ ..+
T Consensus 44 ~~~~~~------~~--------~~~--~~l~~~~~~~~~~~~~~~~~l~pG~~e~l~~l~~~g---~~~~IvS~~~-~~~ 103 (219)
T PRK09552 44 LSIQEG------VG--------QMF--QLLPSNLKEEIIQFLLETAEIREGFHEFVQFVKENN---IPFYVVSGGM-DFF 103 (219)
T ss_pred cCHHHH------HH--------HHH--HhCCCCchHHHHHHHHhCCCcCcCHHHHHHHHHHcC---CeEEEECCCc-HHH
Confidence 222221 11 111 224444557777754 57899999999999999999 9999999998 899
Q ss_pred HHHHHhhcCCCceeEEeeceeecCcccccccccc------CCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhh
Q 008479 421 IRASFSSAGLNALNVHANEFSFKESISTGEIIEK------VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLL 494 (564)
Q Consensus 421 I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~------~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~ 494 (564)
|+++|++. +....|+||.+.++++..+.....+ ..+|.+|..+++++... +.++||||||.+|+++++
T Consensus 104 i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~l~~~~~~-----~~~~i~iGDs~~Di~aa~ 177 (219)
T PRK09552 104 VYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSLIRKLSDT-----NDFHIVIGDSITDLEAAK 177 (219)
T ss_pred HHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHHHHHhccC-----CCCEEEEeCCHHHHHHHH
Confidence 99999987 6556799999998765433222211 12567899988876532 468999999999999999
Q ss_pred hcCccEEEcCChhHHHHHHhhCCceeecCc
Q 008479 495 EADIGIVIGSSSSLRRVGSQFGVTFIPLYP 524 (564)
Q Consensus 495 ~Ad~giv~~~~~~L~~~~~~~gi~~~p~~~ 524 (564)
.||+ +++ +..|.++|+++|++++|+.+
T Consensus 178 ~Ag~--~~a-~~~l~~~~~~~~~~~~~~~~ 204 (219)
T PRK09552 178 QADK--VFA-RDFLITKCEELGIPYTPFET 204 (219)
T ss_pred HCCc--cee-HHHHHHHHHHcCCCccccCC
Confidence 9995 444 44788999999999999975
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.6e-22 Score=205.45 Aligned_cols=192 Identities=19% Similarity=0.202 Sum_probs=156.0
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCcccc
Q 008479 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (564)
Q Consensus 261 ~~~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~ 340 (564)
+.+.+++||||||++..++++.+++.. + ....+..+++.++.+
T Consensus 108 ~~~~LvvfDmDGTLI~~e~i~eia~~~-----g-----------------~~~~v~~it~~~m~G--------------- 150 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQIECIDEIAKLA-----G-----------------TGEEVAEVTERAMRG--------------- 150 (322)
T ss_pred cCCCEEEEECCCCCcchHHHHHHHHHh-----C-----------------CchHHHHHHHHHHcC---------------
Confidence 457799999999999999999988855 1 334555555544332
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 008479 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (564)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~ 420 (564)
+++|.+++. .++ ..++|.+.+.+.+..+.++++||+.++++.++++| +++.|+|+|+ ..+
T Consensus 151 ------eldf~esl~-------~rv---~~l~g~~~~il~~v~~~l~l~pGa~elL~~Lk~~G---~~~aIvSgg~-~~~ 210 (322)
T PRK11133 151 ------ELDFEASLR-------QRV---ATLKGADANILQQVRENLPLMPGLTELVLKLQALG---WKVAIASGGF-TYF 210 (322)
T ss_pred ------CcCHHHHHH-------HHH---HHhCCCCHHHHHHHHHhCCCChhHHHHHHHHHHcC---CEEEEEECCc-chh
Confidence 122222222 244 35688887777777788999999999999999999 9999999998 788
Q ss_pred HHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccE
Q 008479 421 IRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 500 (564)
Q Consensus 421 I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 500 (564)
++.++++.|+ ..+++|.+.+.+|+.||.+.+.+..+..|.+.++++.+..+. ...++|+||||.||++|+..||+||
T Consensus 211 ~~~l~~~Lgl--d~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~lgi-~~~qtIaVGDg~NDl~m~~~AGlgi 287 (322)
T PRK11133 211 ADYLRDKLRL--DAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQEYEI-PLAQTVAIGDGANDLPMIKAAGLGI 287 (322)
T ss_pred HHHHHHHcCC--CeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHHcCC-ChhhEEEEECCHHHHHHHHHCCCeE
Confidence 9998888776 688999999999999998887777888999999999988776 3578999999999999999999999
Q ss_pred EEcCChhHHHHH
Q 008479 501 VIGSSSSLRRVG 512 (564)
Q Consensus 501 v~~~~~~L~~~~ 512 (564)
++++++.+++.+
T Consensus 288 A~nAkp~Vk~~A 299 (322)
T PRK11133 288 AYHAKPKVNEQA 299 (322)
T ss_pred EeCCCHHHHhhC
Confidence 999999888655
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-22 Score=196.36 Aligned_cols=200 Identities=21% Similarity=0.369 Sum_probs=144.9
Q ss_pred CcccccccHhHHHHHHHHHHHHHHhhcCCCccccCCCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHhh--
Q 008479 307 SSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE-- 384 (564)
Q Consensus 307 ~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~-- 384 (564)
+||++....+.+++.|.++..+++++|+|+|.++.++.+++.++ |.|||+++|+.+++. |+++++|.++++
T Consensus 15 sshgil~~~~~~~~~~~~k~~~L~~kY~PIE~dp~~s~eEK~p~---M~EWw~kah~llv~~----~l~k~~i~~~V~~s 87 (246)
T PF05822_consen 15 SSHGILENSKLLPEEYRKKLKELFEKYYPIEIDPTMSIEEKIPH---MEEWWTKAHELLVEQ----GLTKSEIEEAVKES 87 (246)
T ss_dssp -HHHHHHTSTTS-HHHHHHHHHHHHHHHHHHT-SSS-HHHHHHH---HHHHHHHHHHHHHHH----T-BGGGHHHHHHCS
T ss_pred ChHHHHhcCCcCCHHHHHHHHHHHhhccccccCCCCCHHHHHHH---HHHHHHHHHHHHHhc----CcCHHHHHHHHHhc
Confidence 46667777788999999999999999999999999999999986 669999999999985 569999999987
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcC--CCceeEEeeceeecC-ccccccccccCCCCCch
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAG--LNALNVHANEFSFKE-SISTGEIIEKVESPIDK 461 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g--~~~~~I~aN~l~~~~-g~~tG~~~~~~~~g~~K 461 (564)
++.||+|+.+||+.|++++ +|++|+|+|. +++|+.+|++.+ .++++|+||.|.||+ |..+| |.+++....+|
T Consensus 88 ~i~LRdg~~~~f~~L~~~~---IP~lIFSAGl-gdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~g-F~~~lIH~~NK 162 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHN---IPLLIFSAGL-GDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVG-FKGPLIHTFNK 162 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT-----EEEEEEEE-HHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEE-E-SS---TT-H
T ss_pred chhhhcCHHHHHHHHHhcC---CCEEEEeCCc-HHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEee-cCCCceEEeeC
Confidence 6899999999999999998 9999999999 999999999887 368999999999974 77777 66677777788
Q ss_pred HH-HHH--HHHHHhCCCCCccEEEEcCCccchhhhhhc-Cc------cEEEcCC-hhHHHHHHhhCCcee
Q 008479 462 VQ-AFN--NTLEKYGTDRKNLSVYIGDSVGDLLCLLEA-DI------GIVIGSS-SSLRRVGSQFGVTFI 520 (564)
Q Consensus 462 ~~-~l~--~l~~~~~~~~~~~viyiGDs~~Dl~~l~~A-d~------giv~~~~-~~L~~~~~~~gi~~~ 520 (564)
.. .++ .+.+. ...+.+++..|||.+|+.|..-. +. |++-..- ..|.+|.+.+.|-++
T Consensus 163 n~~~l~~~~~~~~--~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv 230 (246)
T PF05822_consen 163 NESALEDSPYFKQ--LKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLV 230 (246)
T ss_dssp HHHHHTTHHHHHC--TTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEE
T ss_pred CcccccCchHHHH--hccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEE
Confidence 75 332 12222 22467899999999999998766 33 3222221 357788877776443
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-21 Score=190.75 Aligned_cols=130 Identities=18% Similarity=0.259 Sum_probs=103.5
Q ss_pred cCCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeeceeecC-cccc
Q 008479 372 KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKE-SIST 448 (564)
Q Consensus 372 ~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~-g~~t 448 (564)
.|++.++|.+..+.+++.|||.++++.+.++. .+.+++|||++. ..||+.+|+++|+... +|++|...|++ |...
T Consensus 56 ~gvt~~~I~~~l~~ip~~pgm~~~l~~l~~~~-~~~~~~IiSDaN-s~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~ 133 (234)
T PF06888_consen 56 QGVTPEDIRDALRSIPIDPGMKELLRFLAKNQ-RGFDLIIISDAN-SFFIETILEHHGLRDCFSEIFTNPACFDADGRLR 133 (234)
T ss_pred cCCCHHHHHHHHHcCCCCccHHHHHHHHHhcC-CCceEEEEeCCc-HhHHHHHHHhCCCccccceEEeCCceecCCceEE
Confidence 48899999999999999999999999996521 239999999997 8999999999998644 89999999975 5322
Q ss_pred -cccc---cc-CCCCCchHHHHHHHHHHhCC--CCCccEEEEcCCccchhhhhh---cCccEEEcCC
Q 008479 449 -GEII---EK-VESPIDKVQAFNNTLEKYGT--DRKNLSVYIGDSVGDLLCLLE---ADIGIVIGSS 505 (564)
Q Consensus 449 -G~~~---~~-~~~g~~K~~~l~~l~~~~~~--~~~~~viyiGDs~~Dl~~l~~---Ad~giv~~~~ 505 (564)
..+. ++ +..++||..+|++++..... ..+.++||||||.||+|+++. .| +|+..+
T Consensus 134 v~pyh~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D--~v~~R~ 198 (234)
T PF06888_consen 134 VRPYHSHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRD--VVFPRK 198 (234)
T ss_pred EeCccCCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCC--EEecCC
Confidence 2222 32 33458999999999986411 135899999999999999986 77 677544
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-22 Score=190.93 Aligned_cols=228 Identities=16% Similarity=0.250 Sum_probs=171.8
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccc-cHhHHHHHHHHHHHHHHhhcCCCccc
Q 008479 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRN-TWGLLSKQYTEEYEQCIESFMPSEKV 339 (564)
Q Consensus 261 ~~~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~w~~~~~~y~~~~~~~~~~~~p~~~~ 339 (564)
..++++|+|||.|||++-|- .+++++++++ +-+ ....+...|.+++.+++.+|+|+|.+
T Consensus 36 a~~~~vIsdfd~TLSrfa~~--------~G~r~pS~~~------------Vfd~~~~~~~~e~~~k~~~LyhkY~PIEid 95 (298)
T KOG3128|consen 36 AGKLQVISDFDYTLSRFATE--------QGKRCPSCFG------------VFDDNVKRLKPECRAKFVALYHKYYPIEID 95 (298)
T ss_pred ccceeEeecCchhHHHHHHh--------hcCcCCcccc------------chhhhhhcCCHHHHHHHHHHHhhccCcccC
Confidence 57999999999999975221 2455554444 444 67778889999999999999999999
Q ss_pred cCCCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHhh--cCCCCccHHHHHHHHHHcCCCCCcEEEEccccC
Q 008479 340 ENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC 417 (564)
Q Consensus 340 ~~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s 417 (564)
+.++++++.++ |.|||.+||+.+++ .|+++++|++.+. ++.||+|+.+|+..|++++ +|+.|+|+|+
T Consensus 96 P~ltieEKvp~---MeeWW~kSH~Lliq----~~f~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~---IP~~iFSAGi- 164 (298)
T KOG3128|consen 96 PVLTIEEKVPH---MEEWWTKSHELLIQ----GGFSKNAIDDIVAESNIALREGYEEFFEALQAHE---IPLLIFSAGI- 164 (298)
T ss_pred CCCChhhhchH---HHHHHhcccceeec----CCcCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC---CceEEEecch-
Confidence 99999999997 55999999999987 4679999999987 6899999999999999999 9999999999
Q ss_pred HHHHHHHHhhcC--CCceeEEeeceeec-CccccccccccCCCCCchHH-HHHHHHHHh-CCCCCccEEEEcCCccchhh
Q 008479 418 GDLIRASFSSAG--LNALNVHANEFSFK-ESISTGEIIEKVESPIDKVQ-AFNNTLEKY-GTDRKNLSVYIGDSVGDLLC 492 (564)
Q Consensus 418 ~~~I~~~l~~~g--~~~~~I~aN~l~~~-~g~~tG~~~~~~~~g~~K~~-~l~~l~~~~-~~~~~~~viyiGDs~~Dl~~ 492 (564)
.+.|+.++++.. .++.+++||-+.|+ +|...| |..++....||.. .++...... ....+.++|+.|||.+|+.|
T Consensus 165 gdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~g-F~~~Lihtfnkn~~v~~~~s~yf~~~~~~~nVillGdsigdl~m 243 (298)
T KOG3128|consen 165 GDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCG-FSQPLIHTFNKNSSVLQNESEYFHQLAGRVNVILLGDSIGDLHM 243 (298)
T ss_pred HHHHHHHHHHHhccCccHHhhhhhhhhcccchhhh-hhHHHHHHHccchHHHHhhhHHHhhccCCceEEEeccccccchh
Confidence 999999998753 35789999999998 454444 3334444444432 222211111 11235789999999999999
Q ss_pred hhhc-Cc------cEEEc-CChhHHHHHHhhCCcee
Q 008479 493 LLEA-DI------GIVIG-SSSSLRRVGSQFGVTFI 520 (564)
Q Consensus 493 l~~A-d~------giv~~-~~~~L~~~~~~~gi~~~ 520 (564)
...+ ++ |+... -...+.+|.+.+.|-.+
T Consensus 244 a~gv~~~~~iLkig~l~d~vee~~~~ymd~ydIvL~ 279 (298)
T KOG3128|consen 244 ADGVPRVGHILKIGYLNDSVEEALEKYMDSYDIVLV 279 (298)
T ss_pred hcCCcccccceeeecccchHHHHHHHHHhhcceEEe
Confidence 8874 22 32222 11467888888887544
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-20 Score=177.52 Aligned_cols=121 Identities=21% Similarity=0.249 Sum_probs=102.0
Q ss_pred hhccCCCHHHHHH-H-hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeec-Cc
Q 008479 369 GVLKGINLEDIKK-A-GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFK-ES 445 (564)
Q Consensus 369 ~~f~Gi~~~~i~~-~-~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~-~g 445 (564)
..+++...+++.+ + .+.+.++||+.++++.++++| ++++|+|+|. ..+|+++++++|+ ..+++|.+.++ +|
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~ivS~~~-~~~i~~~~~~~g~--~~~~~~~~~~~~~g 126 (177)
T TIGR01488 53 ALLHRSRSEEVAKEFLARQVALRPGARELISWLKERG---IDTVIVSGGF-DFFVEPVAEKLGI--DDVFANRLEFDDNG 126 (177)
T ss_pred HHhCCCCHHHHHHHHHHhcCCcCcCHHHHHHHHHHCC---CEEEEECCCc-HHHHHHHHHHcCC--chheeeeEEECCCC
Confidence 4567777666665 5 457889999999999999998 9999999998 8999999999886 47999999996 67
Q ss_pred cccccccc-cCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhc
Q 008479 446 ISTGEIIE-KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 496 (564)
Q Consensus 446 ~~tG~~~~-~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~A 496 (564)
..+|++.+ .++.+.+|...++++....+.+ +.+++|||||.||++|++.|
T Consensus 127 ~~~g~~~~~~~~~~~~K~~~l~~~~~~~~~~-~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 127 LLTGPIEGQVNPEGECKGKVLKELLEESKIT-LKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred EEeCccCCcccCCcchHHHHHHHHHHHhCCC-HHHEEEEeCCHHHHHHHhcC
Confidence 88887765 5677899999999988776542 46899999999999999865
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-19 Score=176.31 Aligned_cols=132 Identities=12% Similarity=0.098 Sum_probs=109.6
Q ss_pred hhhccCCCHHHHHHHhh--------cCCCCccHHHHHH-HHHHcCCCCCcEEEEccccCHHHHHHHHhhcCC-CceeEEe
Q 008479 368 SGVLKGINLEDIKKAGE--------RLSLQDGCTTFFQ-KVVKNENLNANVHVLSYCWCGDLIRASFSSAGL-NALNVHA 437 (564)
Q Consensus 368 ~~~f~Gi~~~~i~~~~~--------~i~lr~G~~efl~-~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~-~~~~I~a 437 (564)
..+|+|++.+++.+.++ ...++||+.+.++ .++++| ++++|||++. ..+++++++..++ ..++++|
T Consensus 67 ~~~~~g~~~~~l~~~~~~f~~~~~~~~~l~pga~e~L~~~l~~~G---~~v~IvSas~-~~~~~~ia~~~~~~~~~~~i~ 142 (210)
T TIGR01545 67 WACTFGHREAHLQDLEADFVAAFRDKVTAFPLVAERLRQYLESSD---ADIWLITGSP-QPLVEAVYFDSNFIHRLNLIA 142 (210)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhCC---CEEEEEcCCc-HHHHHHHHHhccccccCcEEE
Confidence 46789999988877543 3468999999996 566678 9999999997 8899999877543 4478999
Q ss_pred eceeecCccccccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHH
Q 008479 438 NEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRR 510 (564)
Q Consensus 438 N~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~ 510 (564)
+++++.+| |.+.+.+|.|..|+++++++... .....+++|||.||++||..||.++++++++.|++
T Consensus 143 t~le~~~g---g~~~g~~c~g~~Kv~rl~~~~~~----~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~~~L~~ 208 (210)
T TIGR01545 143 SQIERGNG---GWVLPLRCLGHEKVAQLEQKIGS----PLKLYSGYSDSKQDNPLLAFCEHRWRVSKRGELQQ 208 (210)
T ss_pred EEeEEeCC---ceEcCccCCChHHHHHHHHHhCC----ChhheEEecCCcccHHHHHhCCCcEEECcchHhcc
Confidence 99998655 66777899999999999998842 23567899999999999999999999999988874
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-20 Score=171.91 Aligned_cols=176 Identities=18% Similarity=0.197 Sum_probs=143.9
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCccccC
Q 008479 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (564)
Q Consensus 262 ~~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~ 341 (564)
++-+++||.|+|++..+-|+.|+.... ....-..++.
T Consensus 15 ~~~aVcFDvDSTvi~eEgIdelA~~~G----------------------~~~~Va~~T~--------------------- 51 (227)
T KOG1615|consen 15 SADAVCFDVDSTVIQEEGIDELAAYCG----------------------VGEAVAEVTR--------------------- 51 (227)
T ss_pred hcCeEEEecCcchhHHhhHHHHHHHhC----------------------chHHHHHHHH---------------------
Confidence 455899999999999999999998763 2223333332
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHh--hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHH
Q 008479 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG--ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD 419 (564)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~--~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~ 419 (564)
..|.+..+|.++|. .|+ .+|++ +..++.+.+ ++..|.||.+||+..|+++| ..++++|+|| ..
T Consensus 52 rAMng~~~F~eaL~-------~Rl---~llqp-~~~qv~~~v~~~k~~lT~Gi~eLv~~L~~~~---~~v~liSGGF-~~ 116 (227)
T KOG1615|consen 52 RAMNGEADFQEALA-------ARL---SLLQP-LQVQVEQFVIKQKPTLTPGIRELVSRLHARG---TQVYLISGGF-RQ 116 (227)
T ss_pred HHhCCCCcHHHHHH-------HHH---HHhcc-cHHHHHHHHhcCCCccCCCHHHHHHHHHHcC---CeEEEEcCCh-HH
Confidence 25677778888887 466 68888 566666654 37899999999999999999 9999999999 99
Q ss_pred HHHHHHhhcCCCceeEEeeceeec-Cccccc-cccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcC
Q 008479 420 LIRASFSSAGLNALNVHANEFSFK-ESISTG-EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 497 (564)
Q Consensus 420 ~I~~~l~~~g~~~~~I~aN~l~~~-~g~~tG-~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad 497 (564)
+|.++..+.|++...|+||.|.|+ +|.++| ....+...+.+|..+++.+++.. ....+++||||.||++|+..||
T Consensus 117 ~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~lrk~~---~~~~~~mvGDGatDlea~~pa~ 193 (227)
T KOG1615|consen 117 LIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALLRKNY---NYKTIVMVGDGATDLEAMPPAD 193 (227)
T ss_pred HHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHHHhCC---ChheeEEecCCccccccCCchh
Confidence 999999999998888999999997 578877 55567778889999999988743 2467889999999999999987
Q ss_pred c
Q 008479 498 I 498 (564)
Q Consensus 498 ~ 498 (564)
.
T Consensus 194 a 194 (227)
T KOG1615|consen 194 A 194 (227)
T ss_pred h
Confidence 5
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-19 Score=177.61 Aligned_cols=137 Identities=23% Similarity=0.303 Sum_probs=117.7
Q ss_pred hccCCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccc
Q 008479 370 VLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTG 449 (564)
Q Consensus 370 ~f~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG 449 (564)
.|.+.+.+.+.+..+.+.++||+.++++.++++| ++++|||+|+ ..+++.+++..|+ ..+++|.+.+++|.++|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~IvS~~~-~~~~~~~l~~~~i--~~~~~~~~~~~~~~~~~ 141 (219)
T TIGR00338 68 LLKGLPVELLKEVRENLPLTEGAEELVKTLKEKG---YKVAVISGGF-DLFAEHVKDKLGL--DAAFANRLEVEDGKLTG 141 (219)
T ss_pred HhCCCCHHHHHHHHhcCCcCCCHHHHHHHHHHCC---CEEEEECCCc-HHHHHHHHHHcCC--CceEeeEEEEECCEEEE
Confidence 4567788888888888999999999999999988 9999999998 8999999998887 46899999999888888
Q ss_pred cccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHHHHH
Q 008479 450 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGS 513 (564)
Q Consensus 450 ~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~~~~ 513 (564)
...++...+.+|...++.++...+. .+.+++|||||.+|+.++..|++++++++++.+++.+.
T Consensus 142 ~~~~~~~~~~~k~~~~~~~~~~~~~-~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~ 204 (219)
T TIGR00338 142 LVEGPIVDASYKGKTLLILLRKEGI-SPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKAD 204 (219)
T ss_pred EecCcccCCcccHHHHHHHHHHcCC-CHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhch
Confidence 7766555667799999988887765 35789999999999999999999999988877776553
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-19 Score=175.25 Aligned_cols=130 Identities=20% Similarity=0.236 Sum_probs=113.1
Q ss_pred cCCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecC-cccccc
Q 008479 372 KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE-SISTGE 450 (564)
Q Consensus 372 ~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~-g~~tG~ 450 (564)
.|++.+++.+..+.++++||+.++++.++++ .+++|||+|+ ..++++++++.|+ .+++||++.+++ |.+||.
T Consensus 53 ~g~~~~~i~~~~~~i~l~pga~ell~~lk~~----~~~~IVS~~~-~~~~~~il~~lgi--~~~~an~l~~~~~g~~tG~ 125 (203)
T TIGR02137 53 HGLKLGDIQEVIATLKPLEGAVEFVDWLRER----FQVVILSDTF-YEFSQPLMRQLGF--PTLLCHKLEIDDSDRVVGY 125 (203)
T ss_pred CCCCHHHHHHHHHhCCCCccHHHHHHHHHhC----CeEEEEeCCh-HHHHHHHHHHcCC--chhhceeeEEecCCeeECe
Confidence 4999999999999999999999999999985 4899999999 8999999999887 479999999988 888886
Q ss_pred ccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHHHHHhhC
Q 008479 451 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFG 516 (564)
Q Consensus 451 ~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~~~~~~g 516 (564)
.. ..+.+|..+++.+.. . +.++++||||.||++|+..||+||++++++.+++.+.++-
T Consensus 126 ~~---~~~~~K~~~l~~l~~-~----~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~ 183 (203)
T TIGR02137 126 QL---RQKDPKRQSVIAFKS-L----YYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFP 183 (203)
T ss_pred ee---cCcchHHHHHHHHHh-h----CCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCC
Confidence 33 345689999998853 2 2479999999999999999999999999999998875543
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.6e-19 Score=171.63 Aligned_cols=133 Identities=20% Similarity=0.161 Sum_probs=115.8
Q ss_pred hhhccCCCHHHHHHHhhc-------CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeece
Q 008479 368 SGVLKGINLEDIKKAGER-------LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEF 440 (564)
Q Consensus 368 ~~~f~Gi~~~~i~~~~~~-------i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l 440 (564)
...|+|++.+++.+.++. ..++||+.++++.++++| .+++|+|++. ..+++.+++..|+ .++++|++
T Consensus 61 ~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~v~ivS~s~-~~~v~~~~~~lg~--~~~~~~~l 134 (202)
T TIGR01490 61 LDALAGLLEEDVRAIVEEFVNQKIESILYPEARDLIRWHKAEG---HTIVLVSASL-TILVKPLARILGI--DNAIGTRL 134 (202)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHCC---CEEEEEeCCc-HHHHHHHHHHcCC--cceEecce
Confidence 457899999999887653 468999999999999988 9999999998 8999999998776 56899999
Q ss_pred ee-cCccccccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChh
Q 008479 441 SF-KESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 507 (564)
Q Consensus 441 ~~-~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~ 507 (564)
.+ ++|.+||++.++.+.|..|...+++++++.+.+ .+.+++||||.+|++|+..|+.++++.+++.
T Consensus 135 ~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~-~~~~~~~gDs~~D~~~~~~a~~~~~v~~~~~ 201 (202)
T TIGR01490 135 EESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQID-LKDSYAYGDSISDLPLLSLVGHPYVVNPDKK 201 (202)
T ss_pred EEcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCC-HHHcEeeeCCcccHHHHHhCCCcEEeCCCCC
Confidence 98 678999998877788999999999998876652 4689999999999999999999999987653
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-17 Score=159.45 Aligned_cols=133 Identities=19% Similarity=0.160 Sum_probs=108.4
Q ss_pred CCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecC-ccccccc
Q 008479 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE-SISTGEI 451 (564)
Q Consensus 373 Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~-g~~tG~~ 451 (564)
....+++.+..+++.++||+.++++.++++| ++++|||+|+ ..+++.+++.+|+ ..+++|.+.+++ |..++..
T Consensus 66 ~~~~~~~~~~~~~~~~~~g~~e~l~~l~~~g---~~~~IvS~~~-~~~~~~~l~~~g~--~~~~~~~~~~~~~g~~~p~~ 139 (201)
T TIGR01491 66 RLRREEVEEIFKEISLRDYAEELVRWLKEKG---LKTAIVSGGI-MCLAKKVAEKLNP--DYVYSNELVFDEKGFIQPDG 139 (201)
T ss_pred CCCHHHHHHHHHhCCCCccHHHHHHHHHHCC---CEEEEEeCCc-HHHHHHHHHHhCC--CeEEEEEEEEcCCCeEecce
Confidence 3467778887788999999999999999999 9999999998 8999999999886 578999988864 5555431
Q ss_pred cccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHHHHH
Q 008479 452 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGS 513 (564)
Q Consensus 452 ~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~~~~ 513 (564)
. ......+|...++++.+..+.+ +.+++|||||.+|++|+..||+++++++++.|+++++
T Consensus 140 ~-~~~~~~~k~~~~~~~~~~~~~~-~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~ 199 (201)
T TIGR01491 140 I-VRVTFDNKGEAVERLKRELNPS-LTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAK 199 (201)
T ss_pred e-eEEccccHHHHHHHHHHHhCCC-HHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhcc
Confidence 1 1123456888888888776653 4789999999999999999999999998888887765
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2e-17 Score=157.79 Aligned_cols=122 Identities=17% Similarity=0.182 Sum_probs=100.3
Q ss_pred cCCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecC-cccc
Q 008479 372 KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKE-SIST 448 (564)
Q Consensus 372 ~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~-g~~t 448 (564)
.+++.+++.+...+++++||+.++++.++++| ++++|+|++. ..+++.++++.++.. ..|++|++.+++ |..+
T Consensus 57 ~~~~~~~~~~~~~~~~l~~g~~~ll~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~ 132 (188)
T TIGR01489 57 SGLKEDEILEVLKSAPIDPGFKEFIAFIKEHG---IDFIVISDGN-DFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHI 132 (188)
T ss_pred cCCCHHHHHHHHHhCCCCccHHHHHHHHHHcC---CcEEEEeCCc-HHHHHHHHHHcCChhheeEEeccCceECCCCcEE
Confidence 35678888888888999999999999999988 9999999986 899999999888753 379999999975 5655
Q ss_pred ccccc-----cCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 449 GEIIE-----KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 449 G~~~~-----~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
+.... ....|.+|..++++++... +.+++|||||.+|+++++.|| ++++
T Consensus 133 ~~~~~~~~~~~~~~g~~K~~~~~~~~~~~----~~~~i~iGD~~~D~~aa~~~d--~~~a 186 (188)
T TIGR01489 133 VWPHHCHGCCSCPCGCCKGKVIHKLSEPK----YQHIIYIGDGVTDVCPAKLSD--VVFA 186 (188)
T ss_pred EecCCCCccCcCCCCCCHHHHHHHHHhhc----CceEEEECCCcchhchHhcCC--cccc
Confidence 53322 3456789999999887642 468999999999999999998 5664
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-17 Score=156.67 Aligned_cols=185 Identities=17% Similarity=0.206 Sum_probs=133.0
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCcccc
Q 008479 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (564)
Q Consensus 261 ~~~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~ 340 (564)
..+++++||||.||.+.||...+.+... . ......+.++|.+
T Consensus 11 ~~ril~~FDFD~TIid~dSD~wVv~~lp----~------------------~~l~~qL~~t~p~---------------- 52 (256)
T KOG3120|consen 11 SPRILLVFDFDRTIIDQDSDNWVVDELP----T------------------TDLFNQLRDTYPK---------------- 52 (256)
T ss_pred CCcEEEEEecCceeecCCcchHHHHhcc----c------------------chhHHHHHHhccc----------------
Confidence 3789999999999999999888887551 1 1112223232221
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 008479 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (564)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~ 420 (564)
.+|+....||.++--=+|++.++|++..+.+++.||+.++++.+++.|. .+++|||+.- ..|
T Consensus 53 ---------------~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pgmv~lik~~ak~g~--~eliIVSDaN-sfF 114 (256)
T KOG3120|consen 53 ---------------GFWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPGMVRLIKSAAKLGC--FELIIVSDAN-SFF 114 (256)
T ss_pred ---------------chHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCccHHHHHHHHHhCCC--ceEEEEecCc-hhH
Confidence 1233333344432222688999999999999999999999999999882 5999999996 799
Q ss_pred HHHHHhhcCCCc--eeEEeeceeecC-cccc--cc---ccc-cCCCCCchHHHHHHHHHHhCC--CCCccEEEEcCCccc
Q 008479 421 IRASFSSAGLNA--LNVHANEFSFKE-SIST--GE---IIE-KVESPIDKVQAFNNTLEKYGT--DRKNLSVYIGDSVGD 489 (564)
Q Consensus 421 I~~~l~~~g~~~--~~I~aN~l~~~~-g~~t--G~---~~~-~~~~g~~K~~~l~~l~~~~~~--~~~~~viyiGDs~~D 489 (564)
|+.+|+++|+.. ..|++|...++. |.+. +. -++ .+..++||..+|.++....-. ..++++||+|||.||
T Consensus 115 Ie~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD 194 (256)
T KOG3120|consen 115 IEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGAND 194 (256)
T ss_pred HHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCC
Confidence 999999998642 379999999985 5321 11 122 356678999999998754311 124689999999999
Q ss_pred hhhhhh---cCccEEEc
Q 008479 490 LLCLLE---ADIGIVIG 503 (564)
Q Consensus 490 l~~l~~---Ad~giv~~ 503 (564)
+|+.+. .| +++.
T Consensus 195 ~CP~l~Lr~~D--~amp 209 (256)
T KOG3120|consen 195 FCPVLRLRACD--VAMP 209 (256)
T ss_pred cCcchhcccCc--eecc
Confidence 999776 45 5554
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.5e-17 Score=160.05 Aligned_cols=129 Identities=12% Similarity=0.057 Sum_probs=105.9
Q ss_pred ccCCCHHHHHHHhh--------cCCCCccHHHHHH-HHHHcCCCCCcEEEEccccCHHHHHHHHhhcCC-CceeEEeece
Q 008479 371 LKGINLEDIKKAGE--------RLSLQDGCTTFFQ-KVVKNENLNANVHVLSYCWCGDLIRASFSSAGL-NALNVHANEF 440 (564)
Q Consensus 371 f~Gi~~~~i~~~~~--------~i~lr~G~~efl~-~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~-~~~~I~aN~l 440 (564)
+.|++.+++.+..+ .+.+.||+.+.++ .++++| ++++|+|++. ..+++++++..|+ ..++++|+++
T Consensus 71 ~~g~~~~~~~~~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G---~~l~IvSas~-~~~~~~il~~l~~~~~~~~i~t~l 146 (211)
T PRK11590 71 TFGHSEARLQALEADFVRWFRDNVTAFPVVQERLTTYLLSSD---ADVWLITGSP-QPLVEQVYFDTPWLPRVNLIASQM 146 (211)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHhCcCCccHHHHHHHHHHhCC---CEEEEEeCCc-HHHHHHHHHHccccccCceEEEEE
Confidence 34667666655432 2577999999995 566677 9999999997 8999999998773 2468999999
Q ss_pred eecCccccccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHH
Q 008479 441 SFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRR 510 (564)
Q Consensus 441 ~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~ 510 (564)
++ .+||++.+.+|.|..|++++++++.. .....++||||.||++||..|+.++++++++.|++
T Consensus 147 ~~---~~tg~~~g~~c~g~~K~~~l~~~~~~----~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~~l~~ 209 (211)
T PRK11590 147 QR---RYGGWVLTLRCLGHEKVAQLERKIGT----PLRLYSGYSDSKQDNPLLYFCQHRWRVTPRGELQQ 209 (211)
T ss_pred EE---EEccEECCccCCChHHHHHHHHHhCC----CcceEEEecCCcccHHHHHhCCCCEEECccHHhhc
Confidence 87 58899999999999999999998842 23567899999999999999999999999988874
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.9e-17 Score=158.22 Aligned_cols=181 Identities=19% Similarity=0.194 Sum_probs=127.2
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCcccc
Q 008479 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (564)
Q Consensus 261 ~~~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~ 340 (564)
+...+|+||||||||+.|++..+++.. + ..+.|..+.+.|+.+.
T Consensus 10 ~~~k~viFDfDGTL~~~~~~~~~~~~~-----g-----------------~~~~~~~~~~~~~~g~-------------- 53 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEGIDELAEFC-----G-----------------AGEAVAEWTAKAMGGS-------------- 53 (224)
T ss_pred ccCCEEEEeCCCcccchHHHHHHHHHc-----C-----------------ChHHHHHHHHHHHCCC--------------
Confidence 345688899999999999987777633 1 3345666555443321
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHhhc--CCCCccHHHHHHHHHHcCCCCCcEEEEccccCH
Q 008479 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGER--LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG 418 (564)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~--i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~ 418 (564)
+++++.... ++ +.++ .+.+++.+..+. ..++||+.++++.++++| ++++|+|+|. .
T Consensus 54 -~~~~~~~~~-------------~~---~~~~-~~~~~~~~~~~~~~~~l~pg~~e~l~~l~~~g---~~~~IvS~~~-~ 111 (224)
T PLN02954 54 -VPFEEALAA-------------RL---SLFK-PSLSQVEEFLEKRPPRLSPGIPELVKKLRARG---TDVYLVSGGF-R 111 (224)
T ss_pred -CCHHHHHHH-------------HH---HHcC-CCHHHHHHHHHHccCCCCccHHHHHHHHHHCC---CEEEEECCCc-H
Confidence 223221111 11 1112 245666666553 568999999999999998 9999999998 8
Q ss_pred HHHHHHHhhcCCCceeEEeeceeec-Cccccccccc-cCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhc
Q 008479 419 DLIRASFSSAGLNALNVHANEFSFK-ESISTGEIIE-KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 496 (564)
Q Consensus 419 ~~I~~~l~~~g~~~~~I~aN~l~~~-~g~~tG~~~~-~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~A 496 (564)
.+++.+++.+|++..++++|.+.++ +|..+|.... ..+.+.+|...++++....+. .+++|||||.+|+++...+
T Consensus 112 ~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~~~~~~---~~~i~iGDs~~Di~aa~~~ 188 (224)
T PLN02954 112 QMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIKKKHGY---KTMVMIGDGATDLEARKPG 188 (224)
T ss_pred HHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHHHHcCC---CceEEEeCCHHHHHhhhcC
Confidence 9999999999886557999999986 4666664321 223456799999988876542 5799999999999998885
Q ss_pred CccEEE
Q 008479 497 DIGIVI 502 (564)
Q Consensus 497 d~giv~ 502 (564)
+..+++
T Consensus 189 ~~~~~~ 194 (224)
T PLN02954 189 GADLFI 194 (224)
T ss_pred CCCEEE
Confidence 554444
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.5e-14 Score=140.30 Aligned_cols=121 Identities=23% Similarity=0.281 Sum_probs=98.4
Q ss_pred cCCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecC-cccccc
Q 008479 372 KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE-SISTGE 450 (564)
Q Consensus 372 ~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~-g~~tG~ 450 (564)
.|++.+++....+.+.+.||+.++++.++++ ++++|+|++. ..+++.+++++|+ ..+++|.+.+++ +..+|.
T Consensus 53 ~~~~~~~i~~~~~~~~~~pg~~e~L~~L~~~----~~~~IvS~~~-~~~~~~~l~~~gl--~~~f~~~~~~~~~~~i~~~ 125 (205)
T PRK13582 53 HGLGLADIQEVIATLDPLPGAVEFLDWLRER----FQVVILSDTF-YEFAGPLMRQLGW--PTLFCHSLEVDEDGMITGY 125 (205)
T ss_pred cCCCHHHHHHHHHhCCCCCCHHHHHHHHHhc----CCEEEEeCCc-HHHHHHHHHHcCC--chhhcceEEECCCCeEECc
Confidence 3678999999999999999999999999864 6899999998 8999999999887 468899998864 555553
Q ss_pred ccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChh
Q 008479 451 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 507 (564)
Q Consensus 451 ~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~ 507 (564)
- ...+.+|...++++... +..++|||||.+|++++..|++|++++++..
T Consensus 126 ~---~~~p~~k~~~l~~~~~~-----~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~ 174 (205)
T PRK13582 126 D---LRQPDGKRQAVKALKSL-----GYRVIAAGDSYNDTTMLGEADAGILFRPPAN 174 (205)
T ss_pred c---ccccchHHHHHHHHHHh-----CCeEEEEeCCHHHHHHHHhCCCCEEECCCHH
Confidence 2 12346788888766542 3689999999999999999999998876543
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.4e-15 Score=142.85 Aligned_cols=100 Identities=25% Similarity=0.319 Sum_probs=78.6
Q ss_pred CCCccHH----HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecC--ccccccccccCCCCCc
Q 008479 387 SLQDGCT----TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE--SISTGEIIEKVESPID 460 (564)
Q Consensus 387 ~lr~G~~----efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~--g~~tG~~~~~~~~g~~ 460 (564)
.++||+. ++++.++++| ++++|||+|. ..+|+++++..|++...|+||++ +++ +..+|++.+..+ + +
T Consensus 85 ~~~~~~~~~~~e~i~~~~~~~---~~v~IvS~~~-~~~i~~~~~~~~i~~~~v~~~~~-~~~~~~~~~~~~~~~~~-~-~ 157 (192)
T PF12710_consen 85 KLFPGFIPDAMELIRELKDNG---IKVVIVSGSP-DEIIEPIAERLGIDDDNVIGNEL-FDNGGGIFTGRITGSNC-G-G 157 (192)
T ss_dssp HHCTTCHTTHHHHHHHHHHTT---SEEEEEEEEE-HHHHHHHHHHTTSSEGGEEEEEE-ECTTCCEEEEEEEEEEE-S-H
T ss_pred ccCcCchhhHHHHHHHHHHCC---CEEEEECCCc-HHHHHHHHHHcCCCceEEEEEee-eecccceeeeeECCCCC-C-c
Confidence 3455555 9999999988 9999999997 99999999999988778999999 754 345666655432 3 7
Q ss_pred hHHHHHHHH--HHhCCCCCccEEEEcCCccchhhhh
Q 008479 461 KVQAFNNTL--EKYGTDRKNLSVYIGDSVGDLLCLL 494 (564)
Q Consensus 461 K~~~l~~l~--~~~~~~~~~~viyiGDs~~Dl~~l~ 494 (564)
|..+++++. ...+. ...+++|||||.||++|++
T Consensus 158 K~~~l~~~~~~~~~~~-~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 158 KAEALKELYIRDEEDI-DPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHTH-TCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHHHhhcCC-CCCeEEEEECCHHHHHHhC
Confidence 999999992 11111 3578999999999999985
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.8e-12 Score=137.74 Aligned_cols=123 Identities=14% Similarity=0.103 Sum_probs=95.9
Q ss_pred hhhccCCCHHHHHHHhh----c---CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhh-cCCCceeEEeec
Q 008479 368 SGVLKGINLEDIKKAGE----R---LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-AGLNALNVHANE 439 (564)
Q Consensus 368 ~~~f~Gi~~~~i~~~~~----~---i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~-~g~~~~~I~aN~ 439 (564)
...|+|++.+++.+.++ + -.+++...+.+ +++| ..+|||++. ..+++++++. .|+ ..|+|++
T Consensus 84 ~~~f~G~~~~el~~~~r~~l~~f~~~~l~~~a~~~~---~~~g----~~vvVSASp-~~~Vepfa~~~LGi--d~VIgTe 153 (497)
T PLN02177 84 FIAFAGLKIRDIELVSRSVLPKFYAEDVHPETWRVF---NSFG----KRYIITASP-RIMVEPFVKTFLGA--DKVLGTE 153 (497)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHH---HhCC----CEEEEECCc-HHHHHHHHHHcCCC--CEEEecc
Confidence 34589999999977763 1 23666655544 4556 359999998 8899999976 565 6799999
Q ss_pred eee-cCcccccccccc-CCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 440 FSF-KESISTGEIIEK-VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 440 l~~-~~g~~tG~~~~~-~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
++. .+|.+||.+.+. +|.|..|.+++++... .+ ...++||||.||++||..||.++++..+
T Consensus 154 Lev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g---~~--~~~~aYgDS~sD~plL~~a~e~y~V~~~ 216 (497)
T PLN02177 154 LEVSKSGRATGFMKKPGVLVGDHKRDAVLKEFG---DA--LPDLGLGDRETDHDFMSICKEGYMVPRT 216 (497)
T ss_pred cEECcCCEEeeeecCCCCCccHHHHHHHHHHhC---CC--CceEEEECCccHHHHHHhCCccEEeCCC
Confidence 999 489999999877 5789999999985443 11 1238999999999999999999999763
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.2e-10 Score=123.37 Aligned_cols=116 Identities=18% Similarity=0.163 Sum_probs=94.4
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
.++++||+.++++.++++| .+++|+|++. ..+++.++++.|+ ...|+|.+.. .++.+..|...
T Consensus 70 ~lp~~pga~e~L~~lk~~G---~~v~LaTas~-~~~a~~i~~~lGl-Fd~Vigsd~~------------~~~kg~~K~~~ 132 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAG---RKLVLATASD-ERLAQAVAAHLGL-FDGVFASDGT------------TNLKGAAKAAA 132 (479)
T ss_pred hCCCChhHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCC-CCEEEeCCCc------------cccCCchHHHH
Confidence 4579999999999999999 9999999997 8999999998875 3455655421 13445568877
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHHHHHhhCCceeecC
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLY 523 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~~~~~~gi~~~p~~ 523 (564)
+.+.... ..++|+|||.+|++++..|+.++++++++.|++.+++.||+..-+.
T Consensus 133 l~~~l~~------~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~~a~~~~~~~~~~~ 185 (479)
T PRK08238 133 LVEAFGE------RGFDYAGNSAADLPVWAAARRAIVVGASPGVARAARALGPVERVFP 185 (479)
T ss_pred HHHHhCc------cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHHHHHHcCCcceecC
Confidence 7765532 3478999999999999999999999999999999999999877664
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-08 Score=100.38 Aligned_cols=101 Identities=13% Similarity=0.163 Sum_probs=73.4
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||+.++++.++++| +++.|+|++. ...++.+++++|+... + + .+.++. ....+.-|...
T Consensus 91 ~~~~~~g~~~~l~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~~--f------~-~~~~~~---~~~~~kp~~~~ 154 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAG---YPLAVVTNKP-TPFVAPLLEALGIADY--F------S-VVIGGD---SLPNKKPDPAP 154 (226)
T ss_pred cCccCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCCccC--c------c-EEEcCC---CCCCCCcChHH
Confidence 4779999999999999988 9999999997 7889999988876321 1 0 111111 01111224566
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEE
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 502 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~ 502 (564)
++..++..+. .+.++++||||.+|+.++..+|+ .|.+
T Consensus 155 ~~~~~~~~~~-~~~~~i~igD~~~Di~~a~~~g~~~i~v 192 (226)
T PRK13222 155 LLLACEKLGL-DPEEMLFVGDSRNDIQAARAAGCPSVGV 192 (226)
T ss_pred HHHHHHHcCC-ChhheEEECCCHHHHHHHHHCCCcEEEE
Confidence 7777777665 35789999999999999999998 4444
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.1e-09 Score=95.57 Aligned_cols=111 Identities=14% Similarity=0.041 Sum_probs=77.5
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCC--CceeEEeeceeecC-ccccccc-cccCCCC
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL--NALNVHANEFSFKE-SISTGEI-IEKVESP 458 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~--~~~~I~aN~l~~~~-g~~tG~~-~~~~~~g 458 (564)
.....++||+.++++.++++| .+++|+|+++ ...++.+++..++ ....+++....... +...+.. ...+..+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g---~~i~ivS~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (139)
T cd01427 20 IEELELYPGVKEALKELKEKG---IKLALATNKS-RREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIG 95 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCC---CeEEEEeCch-HHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccC
Confidence 345788999999999999998 9999999998 8999999998775 22344544432211 1111111 1234444
Q ss_pred CchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc
Q 008479 459 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 498 (564)
Q Consensus 459 ~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 498 (564)
..|...++.+....+.. ...+++||||.+|+.++..++.
T Consensus 96 ~~~~~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~ 134 (139)
T cd01427 96 KPNPDKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGG 134 (139)
T ss_pred CCCHHHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCC
Confidence 56667777777665542 5789999999999999999764
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.6e-08 Score=98.80 Aligned_cols=97 Identities=15% Similarity=0.190 Sum_probs=72.6
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
.+.+.||+.++++.++++| +++.|+|++. ...++..++..|+... .|++-+ - ...+-.|.
T Consensus 80 ~~~~~~g~~~~l~~L~~~g---~~~~i~S~~~-~~~~~~~l~~~gl~~~f~~i~~~~-----------~---~~~~Kp~p 141 (214)
T PRK13288 80 LVTEYETVYETLKTLKKQG---YKLGIVTTKM-RDTVEMGLKLTGLDEFFDVVITLD-----------D---VEHAKPDP 141 (214)
T ss_pred hcccCcCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCChhceeEEEecC-----------c---CCCCCCCc
Confidence 4678999999999999998 9999999997 7889999998886321 122111 0 01122355
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 500 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 500 (564)
..+++.+...+. .+.+++|||||.+|+.+...|++..
T Consensus 142 ~~~~~~~~~~~~-~~~~~~~iGDs~~Di~aa~~aG~~~ 178 (214)
T PRK13288 142 EPVLKALELLGA-KPEEALMVGDNHHDILAGKNAGTKT 178 (214)
T ss_pred HHHHHHHHHcCC-CHHHEEEECCCHHHHHHHHHCCCeE
Confidence 677777776665 3578999999999999999999843
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.5e-08 Score=99.64 Aligned_cols=103 Identities=15% Similarity=0.126 Sum_probs=75.6
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
....+.||..++++.++++| ++++|+|++- ...++.+++..++. ..+..-+ ++. ....+-.+..
T Consensus 89 ~~~~~~~g~~~~l~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~--~~f~~~~-------~~~---~~~~~Kp~~~ 152 (222)
T PRK10826 89 ETRPLLPGVREALALCKAQG---LKIGLASASP-LHMLEAVLTMFDLR--DYFDALA-------SAE---KLPYSKPHPE 152 (222)
T ss_pred cCCCCCCCHHHHHHHHHHCC---CeEEEEeCCc-HHHHHHHHHhCcch--hcccEEE-------Ecc---cCCCCCCCHH
Confidence 35789999999999999999 9999999985 88899999887753 2222111 111 0111223456
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
.++..++..+. .+.++++||||.+|+.++..||+..+..
T Consensus 153 ~~~~~~~~~~~-~~~~~~~igDs~~Di~aA~~aG~~~i~v 191 (222)
T PRK10826 153 VYLNCAAKLGV-DPLTCVALEDSFNGMIAAKAARMRSIVV 191 (222)
T ss_pred HHHHHHHHcCC-CHHHeEEEcCChhhHHHHHHcCCEEEEe
Confidence 77778877766 3578999999999999999999954443
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=98.96 E-value=6.5e-08 Score=93.29 Aligned_cols=106 Identities=14% Similarity=0.134 Sum_probs=76.1
Q ss_pred HHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCC
Q 008479 379 IKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVE 456 (564)
Q Consensus 379 i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~ 456 (564)
+.+....+.+.||..++++.++++| ++++|+|.+. ...++..++..|+.. ..|++.+ . .|.
T Consensus 84 ~~~~~~~~~~~~~~~~~L~~L~~~g---~~~~i~Sn~~-~~~~~~~l~~~gl~~~fd~i~~s~-----~--~~~------ 146 (198)
T TIGR01428 84 LAEAYLRLPPHPDVPAGLRALKERG---YRLAILSNGS-PAMLKSLVKHAGLDDPFDAVLSAD-----A--VRA------ 146 (198)
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHCCChhhhheeEehh-----h--cCC------
Confidence 3333456889999999999999998 9999999986 888999998877531 1233221 0 111
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc-EEEc
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 503 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~~ 503 (564)
.--+...++..+...+.. +.++++|||+.+|+.++..+|+. |.+.
T Consensus 147 -~KP~~~~~~~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~~i~v~ 192 (198)
T TIGR01428 147 -YKPAPQVYQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFKTAWVN 192 (198)
T ss_pred -CCCCHHHHHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCcEEEec
Confidence 111345667777666653 57899999999999999999984 4443
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.2e-08 Score=97.51 Aligned_cols=98 Identities=16% Similarity=0.145 Sum_probs=72.9
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
...+.||+.++++.++++| +++.|+|++. ...++.++++.|+... .+++.+ ....+-.+.
T Consensus 83 ~~~~~~g~~~~L~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~Kp~p 144 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKG---LRLGLVTNKP-TPLARPLLELLGLAKYFSVLIGGD--------------SLAQRKPHP 144 (213)
T ss_pred cCccCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCcHhhCcEEEecC--------------CCCCCCCCh
Confidence 4789999999999999988 9999999985 7889999998875311 111111 011112245
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 501 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 501 (564)
..+...++..+.. +.+++|||||.+|+.++..|++.++
T Consensus 145 ~~~~~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i 182 (213)
T TIGR01449 145 DPLLLAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSV 182 (213)
T ss_pred HHHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEE
Confidence 6777777777653 5789999999999999999998544
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.6e-08 Score=97.68 Aligned_cols=98 Identities=14% Similarity=0.100 Sum_probs=73.7
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCC----ceeEEeeceeecCccccccccccCCCCCc
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN----ALNVHANEFSFKESISTGEIIEKVESPID 460 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~----~~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 460 (564)
...+.||+.++++.++++| +++.|+|++. ...++..|+..|+. ...++|.. .. ..+--
T Consensus 85 ~~~l~~G~~~~L~~L~~~g---~~~~ivT~~~-~~~~~~~l~~~~l~~~~~f~~i~~~~-----~~---------~~~KP 146 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSG---IKVALTTGFD-RDTAERLLEKLGWTVGDDVDAVVCPS-----DV---------AAGRP 146 (220)
T ss_pred CCccCCCHHHHHHHHHHCC---CEEEEEeCCc-hHHHHHHHHHhhhhhhccCCEEEcCC-----cC---------CCCCC
Confidence 4689999999999999998 9999999886 88999999987753 11222221 11 01112
Q ss_pred hHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccE
Q 008479 461 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 500 (564)
Q Consensus 461 K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 500 (564)
+...+...+++.+...+.+++||||+.+|+.+...||+.+
T Consensus 147 ~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 147 APDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred CHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 4567777777766532478999999999999999999976
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.8e-08 Score=94.21 Aligned_cols=99 Identities=18% Similarity=0.221 Sum_probs=74.2
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCch
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
..+.+.||+.+++++++++| ++++|+|++. ...++..++..|+.. ..+++.+ . ...+--|
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g---~~~~i~Sn~~-~~~~~~~l~~~~l~~~f~~i~~~~----------~----~~~~KP~ 133 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADG---VGTAIATGKS-GPRARSLLEALGLLPLFDHVIGSD----------E----VPRPKPA 133 (205)
T ss_pred cccccCCCHHHHHHHHHHCC---CeEEEEeCCc-hHHHHHHHHHcCChhheeeEEecC----------c----CCCCCCC
Confidence 46899999999999999998 9999999985 788999998887632 1122110 0 1112235
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEE
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 501 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 501 (564)
...+.+.+++.+.+ +.+++|||||.+|+.+++.+++.++
T Consensus 134 ~~~~~~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i 172 (205)
T TIGR01454 134 PDIVREALRLLDVP-PEDAVMVGDAVTDLASARAAGTATV 172 (205)
T ss_pred hHHHHHHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEE
Confidence 67777777777653 5789999999999999999998544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.1e-08 Score=98.47 Aligned_cols=97 Identities=19% Similarity=0.193 Sum_probs=71.6
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
...+.||+.++++.++++| +++.|+|.+- ...++.++++.|+.. ..|++.+ .+..+--+.
T Consensus 107 ~~~l~pg~~e~L~~L~~~g---~~l~I~Tn~~-~~~~~~~l~~~gl~~~Fd~ii~~~--------------d~~~~KP~P 168 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHE---IPIAVASTRP-RRYLERAIEAVGMEGFFSVVLAAE--------------DVYRGKPDP 168 (260)
T ss_pred CcccCCCHHHHHHHHHHCC---CEEEEEeCcC-HHHHHHHHHHcCCHhhCcEEEecc--------------cCCCCCCCH
Confidence 4678999999999999998 9999999984 888999999887632 1222211 011112234
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 500 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 500 (564)
..+...+...+. .+.+++|||||.+|+.+...|++.+
T Consensus 169 e~~~~a~~~l~~-~p~~~l~IgDs~~Di~aA~~aG~~~ 205 (260)
T PLN03243 169 EMFMYAAERLGF-IPERCIVFGNSNSSVEAAHDGCMKC 205 (260)
T ss_pred HHHHHHHHHhCC-ChHHeEEEcCCHHHHHHHHHcCCEE
Confidence 566666666665 3578999999999999999999843
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=4.1e-08 Score=99.86 Aligned_cols=96 Identities=21% Similarity=0.302 Sum_probs=72.5
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
..+.+.||+.++++.++++| +++.|+|.+. ...++.++++.|+... + .. +.++... ..|..
T Consensus 139 ~~~~l~pg~~e~L~~L~~~g---i~laIvSn~~-~~~~~~~L~~~gl~~~--F----~~---vi~~~~~------~~k~~ 199 (273)
T PRK13225 139 PALQLFPGVADLLAQLRSRS---LCLGILSSNS-RQNIEAFLQRQGLRSL--F----SV---VQAGTPI------LSKRR 199 (273)
T ss_pred ccCCcCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCChhh--e----EE---EEecCCC------CCCHH
Confidence 45788999999999999998 9999999996 8999999999886321 1 11 1112110 12556
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
.+..++...+.. +.+++|||||.+|+.+...|++.
T Consensus 200 ~~~~~l~~~~~~-p~~~l~IGDs~~Di~aA~~AG~~ 234 (273)
T PRK13225 200 ALSQLVAREGWQ-PAAVMYVGDETRDVEAARQVGLI 234 (273)
T ss_pred HHHHHHHHhCcC-hhHEEEECCCHHHHHHHHHCCCe
Confidence 777777766553 47899999999999999999983
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.4e-07 Score=93.38 Aligned_cols=98 Identities=17% Similarity=0.175 Sum_probs=71.5
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
...+.||+.++++.++++| +++.|+|.+- ..+++.++++.|+... .|++.+ . .+ .+-.+.
T Consensus 93 ~~~~~pg~~~~L~~L~~~g---~~l~i~Tn~~-~~~~~~~l~~~~l~~~f~~i~~~~-----~--~~-------~~KP~p 154 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAG---CVWGIVTNKP-EYLARLILPQLGWEQRCAVLIGGD-----T--LA-------ERKPHP 154 (229)
T ss_pred cCeeCCCHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCchhcccEEEecC-----c--CC-------CCCCCH
Confidence 5789999999999999998 9999999884 7888888888775321 111111 0 01 112244
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 501 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 501 (564)
..+...++..+. .+.++++||||.+|+.+...|++..+
T Consensus 155 ~~~~~~~~~l~~-~p~~~l~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 155 LPLLVAAERIGV-APTDCVYVGDDERDILAARAAGMPSV 192 (229)
T ss_pred HHHHHHHHHhCC-ChhhEEEeCCCHHHHHHHHHCCCcEE
Confidence 667777777665 35889999999999999999998533
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.82 E-value=9e-08 Score=100.80 Aligned_cols=98 Identities=14% Similarity=0.141 Sum_probs=72.6
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
...+.||+.++++.|+++| +++.|+|.+- ...++.++++.|+.. ..|++-+ . ...+--+.
T Consensus 214 ~~~l~pGa~ElL~~Lk~~G---iklaIaSn~~-~~~~~~~L~~lgL~~yFd~Iv~sd-----d---------v~~~KP~P 275 (381)
T PLN02575 214 IYRLRTGSQEFVNVLMNYK---IPMALVSTRP-RKTLENAIGSIGIRGFFSVIVAAE-----D---------VYRGKPDP 275 (381)
T ss_pred CCCcCcCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCCHHHceEEEecC-----c---------CCCCCCCH
Confidence 4678999999999999998 9999999986 889999999888632 1222211 0 00112244
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 501 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 501 (564)
..+.......+. .+.++++||||.+|+.++..|++.++
T Consensus 276 eifl~A~~~lgl-~Peecl~IGDS~~DIeAAk~AGm~~I 313 (381)
T PLN02575 276 EMFIYAAQLLNF-IPERCIVFGNSNQTVEAAHDARMKCV 313 (381)
T ss_pred HHHHHHHHHcCC-CcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 566666666665 35789999999999999999999433
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=98.81 E-value=9e-08 Score=96.12 Aligned_cols=101 Identities=14% Similarity=0.038 Sum_probs=70.8
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
+...+.||+.++++.++++| +++.|+|++- ...++.++++.|+... + .+.+.++. ....+--+..
T Consensus 96 ~~~~~~pg~~e~L~~L~~~g---~~l~IvT~~~-~~~~~~~l~~~gl~~~--f------~d~ii~~~---~~~~~KP~p~ 160 (253)
T TIGR01422 96 EYSSPIPGVIEVIAYLRARG---IKIGSTTGYT-REMMDVVAPEAALQGY--R------PDYNVTTD---DVPAGRPAPW 160 (253)
T ss_pred hcCccCCCHHHHHHHHHHCC---CeEEEECCCc-HHHHHHHHHHHHhcCC--C------CceEEccc---cCCCCCCCHH
Confidence 35789999999999999998 9999999985 8899999988775321 0 01111111 0001112345
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
.+...+...+...+.+++|||||.+|+.+...|++.
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 566666666542257899999999999999999984
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.5e-07 Score=92.30 Aligned_cols=100 Identities=14% Similarity=0.189 Sum_probs=72.2
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
.+.+.||+.++++.++++| +++.|+|.+. ...++..+++.|+.. ..|++.+ ..| .+-.+.
T Consensus 92 ~~~~~~g~~~~L~~L~~~g---~~~~i~Tn~~-~~~~~~~l~~~~l~~~f~~i~~~~-------~~~-------~~KP~~ 153 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESG---YRLGIITDGL-PVKQWEKLERLGVRDFFDAVITSE-------EEG-------VEKPHP 153 (221)
T ss_pred hCCCCCCHHHHHHHHHHCC---CEEEEEeCCc-hHHHHHHHHhCChHHhccEEEEec-------cCC-------CCCCCH
Confidence 5789999999999999998 9999999996 677888888877532 1122211 011 111234
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCc-cEEEc
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 503 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-giv~~ 503 (564)
..++..++..+.+ +.++++||||. +|+.+...+++ .|.+.
T Consensus 154 ~~~~~~~~~~~~~-~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 154 KIFYAALKRLGVK-PEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHcCCC-hhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 5667777776653 47899999998 99999999998 44443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.3e-07 Score=94.33 Aligned_cols=98 Identities=13% Similarity=0.169 Sum_probs=70.8
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||+.++++.++++| ++++|+|++- ...++.++.+.++... + + .+.++.- ...+-.+...
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g---~~l~ivTn~~-~~~~~~~l~~~~i~~~--f-~------~i~~~d~---~~~~Kp~p~~ 162 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQG---VEMALITNKP-ERFVAPLLDQMKIGRY--F-R------WIIGGDT---LPQKKPDPAA 162 (272)
T ss_pred CCccCCCHHHHHHHHHHCC---CeEEEEECCc-HHHHHHHHHHcCcHhh--C-e------EEEecCC---CCCCCCCcHH
Confidence 4678999999999999988 9999999885 7889999988775321 0 0 1111110 1112234466
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
++.++...+.+ +.++++|||+.+|+.++..+++.
T Consensus 163 ~~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~ 196 (272)
T PRK13223 163 LLFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQ 196 (272)
T ss_pred HHHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCCe
Confidence 77777776653 57899999999999999999983
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.4e-07 Score=92.77 Aligned_cols=101 Identities=10% Similarity=0.015 Sum_probs=70.5
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
+.+.+.||+.++++.++++| +++.|+|++. ...++.+++..++... + + +.+.++. ....+--+..
T Consensus 98 ~~~~~~pg~~elL~~L~~~g---~~l~I~T~~~-~~~~~~~l~~~~l~~~--~-----~-d~i~~~~---~~~~~KP~p~ 162 (267)
T PRK13478 98 DYATPIPGVLEVIAALRARG---IKIGSTTGYT-REMMDVVVPLAAAQGY--R-----P-DHVVTTD---DVPAGRPYPW 162 (267)
T ss_pred hcCCCCCCHHHHHHHHHHCC---CEEEEEcCCc-HHHHHHHHHHHhhcCC--C-----c-eEEEcCC---cCCCCCCChH
Confidence 35788999999999999998 9999999886 7888888887654211 0 0 1111111 0011112345
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
.+...+...+......++|||||.+|+.+...|++.
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 667777766653346899999999999999999983
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.6e-07 Score=94.12 Aligned_cols=98 Identities=15% Similarity=0.114 Sum_probs=72.1
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
.+.+.||+.++++.++++| +++.|+|.+. ...++..+++.|+.. ..|++.+- . ..+--+.
T Consensus 106 ~~~l~pgv~e~L~~L~~~g---~~l~I~Tn~~-~~~~~~~l~~~gl~~~Fd~iv~~~~-----~---------~~~KP~p 167 (248)
T PLN02770 106 QLKPLNGLYKLKKWIEDRG---LKRAAVTNAP-RENAELMISLLGLSDFFQAVIIGSE-----C---------EHAKPHP 167 (248)
T ss_pred cCCcCccHHHHHHHHHHcC---CeEEEEeCCC-HHHHHHHHHHcCChhhCcEEEecCc-----C---------CCCCCCh
Confidence 5789999999999999998 9999999996 899999999888632 12222220 0 0111233
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 501 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 501 (564)
..+...++..+. .+.+++||||+.+|+.+...|++.++
T Consensus 168 ~~~~~a~~~~~~-~~~~~l~vgDs~~Di~aA~~aGi~~i 205 (248)
T PLN02770 168 DPYLKALEVLKV-SKDHTFVFEDSVSGIKAGVAAGMPVV 205 (248)
T ss_pred HHHHHHHHHhCC-ChhHEEEEcCCHHHHHHHHHCCCEEE
Confidence 556666666655 35789999999999999999998433
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.8e-07 Score=89.50 Aligned_cols=101 Identities=17% Similarity=0.149 Sum_probs=69.4
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce-eEEeeceeecCccccccccccCCCCCchH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL-NVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
..+.+.||+.++++.++++| +++.|+|.+- ...++..+...++... .|++.+ .+ ...--+.
T Consensus 80 ~~~~~~pg~~e~L~~L~~~g---~~~~ivTn~~-~~~~~~~l~~~~l~~~~~i~~~~----------~~----~~~KP~p 141 (218)
T PRK11587 80 EGITALPGAIALLNHLNKLG---IPWAIVTSGS-VPVASARHKAAGLPAPEVFVTAE----------RV----KRGKPEP 141 (218)
T ss_pred cCceeCcCHHHHHHHHHHcC---CcEEEEcCCC-chHHHHHHHhcCCCCccEEEEHH----------Hh----cCCCCCc
Confidence 46789999999999999999 9999999985 5666777776665321 122211 00 0011123
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc-EEEc
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 503 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~~ 503 (564)
..+.......+. .+.+++|||||.+|+.+...|++. |.+.
T Consensus 142 ~~~~~~~~~~g~-~p~~~l~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 142 DAYLLGAQLLGL-APQECVVVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred HHHHHHHHHcCC-CcccEEEEecchhhhHHHHHCCCEEEEEC
Confidence 455555555555 358899999999999999999984 4443
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.6e-07 Score=86.79 Aligned_cols=95 Identities=15% Similarity=0.129 Sum_probs=67.1
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
.+.+.||+.++++.++++| +++.|+|++ ..++.+++..|+.. ..+++.. ..+ ....+.
T Consensus 86 ~~~~~~g~~~~l~~l~~~g---~~i~i~S~~---~~~~~~l~~~~l~~~f~~v~~~~-------~~~-------~~kp~~ 145 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKG---IAVGLGSSS---KNADRILAKLGLTDYFDAIVDAD-------EVK-------EGKPHP 145 (185)
T ss_pred CCCCCcCHHHHHHHHHHcC---CeEEEEeCc---hhHHHHHHHcChHHHCCEeeehh-------hCC-------CCCCCh
Confidence 4789999999999999988 999999986 45788888877531 1222211 000 111233
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 500 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 500 (564)
..+...++..+. .+.++++||||.+|+.+...+++..
T Consensus 146 ~~~~~~~~~~~~-~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 146 ETFLLAAELLGV-SPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred HHHHHHHHHcCC-CHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 455566666555 3578999999999999999999753
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.2e-06 Score=84.83 Aligned_cols=94 Identities=18% Similarity=0.194 Sum_probs=65.0
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchHH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
..+.||+.++++.++++| +++.|+|.+- .. ++..++..|+.. ..|++.. .+| .+--+..
T Consensus 104 ~~~~~g~~~~l~~L~~~g---~~~~i~Sn~~-~~-~~~~l~~~~l~~~fd~i~~s~-------~~~-------~~KP~~~ 164 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERG---LILGVISNFD-SR-LRGLLEALGLLEYFDFVVTSY-------EVG-------AEKPDPK 164 (203)
T ss_pred ceeCcCHHHHHHHHHHCC---CEEEEEeCCc-hh-HHHHHHHCCcHHhcceEEeec-------ccC-------CCCCCHH
Confidence 468899999999999988 9999999763 43 577888776521 1222211 011 1111335
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCcc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG 499 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~g 499 (564)
.++..+...+. .+.++++||||. +|+.+...+|+.
T Consensus 165 ~~~~~~~~~~~-~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGI-SPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCC-ChhHEEEECCCchHHHHHHHHcCCe
Confidence 66666666665 358899999997 899999999863
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=98.67 E-value=5e-07 Score=84.04 Aligned_cols=97 Identities=21% Similarity=0.293 Sum_probs=74.1
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCC--ceeEEeeceeecCccccccccccCCCCCch
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN--ALNVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
....+.||..++++.++++| ++++|+|.+- ...++..++.+|+. ...|++.. .....-.+
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~---~~~~i~Sn~~-~~~~~~~l~~~~~~~~f~~i~~~~--------------~~~~~Kp~ 135 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKG---IPLVIVSNGS-RERIERVLERLGLDDYFDEIISSD--------------DVGSRKPD 135 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTT---SEEEEEESSE-HHHHHHHHHHTTHGGGCSEEEEGG--------------GSSSSTTS
T ss_pred hccchhhhhhhhhhhccccc---ceeEEeecCC-cccccccccccccccccccccccc--------------hhhhhhhH
Confidence 47899999999999999888 9999999884 89999999988753 11222221 01111234
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
...++..++..+. .+.++++|||+..|+.+...+|+.
T Consensus 136 ~~~~~~~~~~~~~-~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 136 PDAYRRALEKLGI-PPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHHTS-SGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHcCC-CcceEEEEeCCHHHHHHHHHcCCe
Confidence 5778888877776 358999999999999999999974
|
... |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.3e-07 Score=89.24 Aligned_cols=99 Identities=17% Similarity=0.314 Sum_probs=70.2
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
.+.+.||+.++++.++ ++ +++.|+|.+. ...++..+++.|+.. ..|++-+ ..| ..--+.
T Consensus 93 ~~~~~~g~~~~L~~L~-~~---~~~~i~Tn~~-~~~~~~~l~~~~l~~~fd~v~~~~-------~~~-------~~KP~p 153 (224)
T PRK09449 93 ICTPLPGAVELLNALR-GK---VKMGIITNGF-TELQQVRLERTGLRDYFDLLVISE-------QVG-------VAKPDV 153 (224)
T ss_pred cCccCccHHHHHHHHH-hC---CeEEEEeCCc-HHHHHHHHHhCChHHHcCEEEEEC-------ccC-------CCCCCH
Confidence 4779999999999999 56 8999999997 788888898877531 1122111 011 111234
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCcc-EEE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG-IVI 502 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~g-iv~ 502 (564)
..+...++..+......+++||||. +|+.+...|++. |.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~ 195 (224)
T PRK09449 154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWL 195 (224)
T ss_pred HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEE
Confidence 6677777766643336899999998 799999999984 444
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=6.4e-07 Score=88.48 Aligned_cols=99 Identities=17% Similarity=0.237 Sum_probs=73.0
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCc
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPID 460 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 460 (564)
...+.+.||+.++++.++++| +++.|+|.+- ...++..+++.|+.. ..|++.+- .| .+--
T Consensus 89 ~~~~~~~~g~~e~L~~Lk~~g---~~~~i~Tn~~-~~~~~~~l~~~~l~~~fd~iv~s~~-------~~-------~~KP 150 (224)
T PRK14988 89 GPRAVLREDTVPFLEALKASG---KRRILLTNAH-PHNLAVKLEHTGLDAHLDLLLSTHT-------FG-------YPKE 150 (224)
T ss_pred hccCCcCCCHHHHHHHHHhCC---CeEEEEeCcC-HHHHHHHHHHCCcHHHCCEEEEeee-------CC-------CCCC
Confidence 356889999999999999998 9999999984 888988888877521 12333220 01 1111
Q ss_pred hHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccE
Q 008479 461 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 500 (564)
Q Consensus 461 K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 500 (564)
+...+....+..+. .+.+++|||||.+|+.+...||+..
T Consensus 151 ~p~~~~~~~~~~~~-~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 151 DQRLWQAVAEHTGL-KAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred CHHHHHHHHHHcCC-ChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 34666666666665 3578999999999999999999953
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.1e-07 Score=83.93 Aligned_cols=91 Identities=12% Similarity=0.144 Sum_probs=65.1
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
.....||..++++.++++| +++.|+|.+. ...+...++.+ +.. ..|++.+ . .. +-.+.
T Consensus 62 ~~~~~~g~~e~l~~L~~~g---~~~~i~T~~~-~~~~~~~~~~~-l~~~f~~i~~~~-----~---------~~-~Kp~~ 121 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAG---IKLGIISNGS-LRAQKLLLRKH-LGDYFDLILGSD-----E---------FG-AKPEP 121 (154)
T ss_pred hheeccCHHHHHHHHHHCc---CeEEEEeCCc-hHHHHHHHHHH-HHhcCcEEEecC-----C---------CC-CCcCH
Confidence 4556699999999999988 9999999997 77888887764 211 1122211 1 11 12245
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcC
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 497 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad 497 (564)
..+...+.+.+.+ + ++++|||+.+|+.+.+.|+
T Consensus 122 ~~~~~~~~~~~~~-~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 122 EIFLAALESLGLP-P-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHcCCC-C-CEEEEeCCHHHHHHHHHcc
Confidence 7777777777663 4 8999999999999998875
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=98.61 E-value=7.4e-07 Score=84.61 Aligned_cols=96 Identities=14% Similarity=0.152 Sum_probs=65.4
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||+.++++.++++| +++.|+|.+.. .+..++..|+... + . .+.++. .....--+...
T Consensus 85 ~~~~~pg~~~~L~~L~~~g---~~~~i~s~~~~---~~~~l~~~~l~~~--f----~---~~~~~~---~~~~~kp~p~~ 146 (185)
T TIGR01990 85 PADVLPGIKNLLDDLKKNN---IKIALASASKN---APTVLEKLGLIDY--F----D---AIVDPA---EIKKGKPDPEI 146 (185)
T ss_pred CcccCccHHHHHHHHHHCC---CeEEEEeCCcc---HHHHHHhcCcHhh--C----c---EEEehh---hcCCCCCChHH
Confidence 3578999999999999998 99999998753 3456777665211 1 0 111111 00111224566
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
++..++..+. .+.++++|||+.+|+.+...+++.
T Consensus 147 ~~~~~~~~~~-~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 147 FLAAAEGLGV-SPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHcCC-CHHHeEEEecCHHHHHHHHHcCCE
Confidence 6667766655 357899999999999999999984
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK05157 pyrroloquinoline quinone biosynthesis protein PqqC; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=7.4e-06 Score=80.86 Aligned_cols=204 Identities=12% Similarity=0.047 Sum_probs=137.9
Q ss_pred CCCcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 008479 10 SPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK 89 (564)
Q Consensus 10 ~~~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~ 89 (564)
+-....|.+.|-... -...++|||-+.+.+|+|+++.++-|..|=|+|-..+.+..+-++++++|.+.+..+.+.+
T Consensus 8 ~~s~~eF~~~L~~~~---~~yh~~HPF~~~~~~Gklt~~qlq~wa~nrYyyq~~~P~kdaaI~S~c~D~e~Rr~w~~ri- 83 (246)
T PRK05157 8 LLSPEEFEAALRAIG---ARYHIHHPFHRLLHEGKLTREQIQAWVANRFYYQINIPLKDAAILSNCPDRETRREWRQRI- 83 (246)
T ss_pred CCCHHHHHHHHHHHH---HhhcccChHHHHHHcCCCCHHHHHHHHHHhchhhccchHHHHHHHHcCCCHHHHHHHHHHH-
Confidence 334556777765543 2233589999999999999999999999999999999999999999999998866543332
Q ss_pred HHHHH--------HHHHHHHHHHhCCCccc--cc-CCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHH
Q 008479 90 GVLEE--------LKMHDSFVKEWGTDLAK--MA-TVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLG 158 (564)
Q Consensus 90 ~i~~E--------~~~h~~~~~~~gi~~~~--~~-~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 158 (564)
+.+| .++...+.+.+|++.++ +. ...|+|+..++-....+.... |. ++++
T Consensus 84 -~d~dG~~~~~ghie~Wlrf~ealGl~re~v~s~~~~lP~tr~aVday~~~~r~~~------------~~------eava 144 (246)
T PRK05157 84 -LDHDGDGGGEGGIERWLRLGEAVGLDRDYVLSLRGVLPGVRFAVDAYVNFARRAP------------WL------EAVA 144 (246)
T ss_pred -HHhcCCCCCCCcHHHHHHHHHHcCCCHHHHhccccCChHHHHHHHHHHHHHccCC------------HH------HHHH
Confidence 2222 57888999999999873 33 378999999999888885332 33 5677
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCcccccccccccCChhHHHH-------HHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 008479 159 AMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQAS-------ALQNEDLLDKLSVSLTGEELDIIEKLYHQ 231 (564)
Q Consensus 159 Al~pC~~~Y~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~-------v~~l~~~ld~~~~~~~~~~~~~~~~~F~~ 231 (564)
|++. +.-=-.|.+...... ..+..|++.=+=.-|... +..-.+++-+.+ .++++++++.++-+.
T Consensus 145 s~lt-E~~~P~I~~~ri~gl------~~~Y~~~~~e~l~yF~~h~~~a~~Dvehal~~~l~~~--~t~e~q~~al~al~~ 215 (246)
T PRK05157 145 SSLT-ELFAPQIHQERLAGW------PEHYPWIDPEGLAYFRSRLTQAPRDVEHGLAYVLDHA--TTREQQERALEALQF 215 (246)
T ss_pred HHHH-HHhhhHHHHHHHHHH------HHHCCCCCHHHHHHHHHHhhccchhHHHHHHHHHHHc--CCHHHHHHHHHHHHH
Confidence 7766 443334433222111 112246552111112211 122222333332 377899999999999
Q ss_pred HHHHHHHhhccCCC
Q 008479 232 AMKLEVEFFCAQPL 245 (564)
Q Consensus 232 ~~~lE~~Fw~~a~~ 245 (564)
.|..=+.|+|+...
T Consensus 216 k~d~Lw~~LDai~~ 229 (246)
T PRK05157 216 KLDVLWSMLDALYM 229 (246)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998743
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=98.60 E-value=6.3e-07 Score=95.55 Aligned_cols=99 Identities=13% Similarity=0.170 Sum_probs=71.4
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHh-hcCCCc--eeEEeeceeecCccccccccccCCCCCc
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFS-SAGLNA--LNVHANEFSFKESISTGEIIEKVESPID 460 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~-~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 460 (564)
+++.+.||+.++++.++++| +++.|+|.+. ...++..+. ..|+.. ..|+|-+ .+..+--
T Consensus 90 ~~~~l~pGv~elL~~Lk~~g---~~l~IvTn~~-~~~~~~~l~~~~gl~~~Fd~ii~~d--------------~v~~~KP 151 (382)
T PLN02940 90 CNIKALPGANRLIKHLKSHG---VPMALASNSP-RANIEAKISCHQGWKESFSVIVGGD--------------EVEKGKP 151 (382)
T ss_pred ccCCCCcCHHHHHHHHHHCC---CcEEEEeCCc-HHHHHHHHHhccChHhhCCEEEehh--------------hcCCCCC
Confidence 46789999999999999998 9999999986 778888776 455421 1222211 0111122
Q ss_pred hHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEE
Q 008479 461 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 501 (564)
Q Consensus 461 K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 501 (564)
+.+.+...++..+.. +.++++||||.+|+.++..|++.++
T Consensus 152 ~p~~~~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 152 SPDIFLEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred CHHHHHHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 456677777776653 5789999999999999999999533
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.8e-06 Score=83.52 Aligned_cols=109 Identities=12% Similarity=0.113 Sum_probs=73.0
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhc-CCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSA-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~-g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
..+.||+.++++.++++| ++++|+|.+. ...+..++... ++.. ..|++.. .+...--+.
T Consensus 83 ~~~~~g~~e~L~~l~~~g---~~~~i~Sn~~-~~~~~~~~~~~~~l~~~fd~v~~s~--------------~~~~~KP~p 144 (199)
T PRK09456 83 VALRPEVIAIMHKLREQG---HRVVVLSNTN-RLHTTFWPEEYPEVRAAADHIYLSQ--------------DLGMRKPEA 144 (199)
T ss_pred hccCHHHHHHHHHHHhCC---CcEEEEcCCc-hhhHHHHHhhchhHHHhcCEEEEec--------------ccCCCCCCH
Confidence 468999999999999998 9999999885 55555544332 2210 1111111 011112245
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEcCChhHHHHHH
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSSLRRVGS 513 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~~~~~L~~~~~ 513 (564)
..++..++..+. .+.+++||||+..|+.+.+.+|+ .|.+.+...+.++.+
T Consensus 145 ~~~~~~~~~~~~-~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~ 195 (199)
T PRK09456 145 RIYQHVLQAEGF-SAADAVFFDDNADNIEAANALGITSILVTDKQTIPDYFA 195 (199)
T ss_pred HHHHHHHHHcCC-ChhHeEEeCCCHHHHHHHHHcCCEEEEecCCccHHHHHH
Confidence 667777777665 35889999999999999999999 555655556665543
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.6e-06 Score=85.33 Aligned_cols=94 Identities=16% Similarity=0.179 Sum_probs=70.4
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeeceeecCccccccccccCCCCCchHH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
..+-||..+.+..++++| +++.|+|..- ...++.+|+++|+... .+++ .++ ....+ -...
T Consensus 88 ~~~~~gv~e~L~~L~~~g---~~l~i~T~k~-~~~~~~~l~~~gl~~~F~~i~g----~~~----~~~~K------P~P~ 149 (220)
T COG0546 88 SRLFPGVKELLAALKSAG---YKLGIVTNKP-ERELDILLKALGLADYFDVIVG----GDD----VPPPK------PDPE 149 (220)
T ss_pred CccCCCHHHHHHHHHhCC---CeEEEEeCCc-HHHHHHHHHHhCCccccceEEc----CCC----CCCCC------cCHH
Confidence 579999999999999999 9999999885 8899999999886422 1222 000 00001 1335
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 498 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 498 (564)
.+...+...+.+ +.++++||||.+|+.|.+.|++
T Consensus 150 ~l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~ 183 (220)
T COG0546 150 PLLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGV 183 (220)
T ss_pred HHHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCC
Confidence 566677777765 4689999999999999999996
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.53 E-value=7.8e-06 Score=83.79 Aligned_cols=103 Identities=18% Similarity=0.201 Sum_probs=70.5
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 465 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 465 (564)
+.+.||+.++++.++++| +++.|+|.+. ...+..+++..+.. . +.+.+.+ .++. .+...-.+...+
T Consensus 143 ~~l~pGv~elL~~L~~~g---~~l~IvTn~~-~~~~~~~l~~~~~~--~-~~~~~~~----v~~~---~~~~~KP~p~~~ 208 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAG---IKVAVCSTSN-EKAVSKIVNTLLGP--E-RAQGLDV----FAGD---DVPKKKPDPDIY 208 (286)
T ss_pred CCchhhHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHhccc--c-ccCceEE----Eecc---ccCCCCCCHHHH
Confidence 689999999999999998 9999999885 88888888754210 0 1111111 0111 011112234567
Q ss_pred HHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 466 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 466 ~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
...+...+.+ +.++++||||.+|+.+...+|+.++..
T Consensus 209 ~~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v 245 (286)
T PLN02779 209 NLAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIVT 245 (286)
T ss_pred HHHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEEE
Confidence 7777766653 578999999999999999999865443
|
|
| >TIGR02111 PQQ_syn_pqqC coenzyme PQQ biosynthesis protein C | Back alignment and domain information |
|---|
Probab=98.53 E-value=8.1e-06 Score=79.87 Aligned_cols=185 Identities=13% Similarity=0.078 Sum_probs=127.5
Q ss_pred hhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-H--------HHHHHHH
Q 008479 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLE-E--------LKMHDSF 101 (564)
Q Consensus 31 ~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i~~-E--------~~~h~~~ 101 (564)
..+|||-+.+.+|.|+++.++.|..|=|+|-..+.+..+-+.++++|.+.++.+... +.+ + .++...+
T Consensus 19 h~~HPF~~~~~~GkLt~~ql~~wa~nrYyyq~~iP~kdAAi~s~c~D~e~Rr~wl~r---i~DhdG~~~~~ggie~Wlrf 95 (239)
T TIGR02111 19 HDLHPFHALLHDGKLTRDQVQAWVLNRYYYQANIPLKDAAILARCPDPQLRRIWRQR---ILDHDGDHEEDGGIERWLRL 95 (239)
T ss_pred cccCcHHHHHhcCCCCHHHHHHHHHHhhhhhhcccHHHHHHHHcCCCHHHHHHHHHH---HHHhcCCCCCCCcHHHHHHH
Confidence 468999999999999999999999999999999999999999999999987665333 332 2 5788889
Q ss_pred HHHhCCCccc---ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 008479 102 VKEWGTDLAK---MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALL 178 (564)
Q Consensus 102 ~~~~gi~~~~---~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~i~~~~~~~~ 178 (564)
.+..|++.+. .....|+|+..++-....+... || .++++|++. +.-=-.|.+.-....
T Consensus 96 aealGl~re~v~s~~~~lP~trfaVday~~f~r~~------------~~------~eavasslT-E~f~P~I~~~ri~gl 156 (239)
T TIGR02111 96 AEAVGLDREYVLSTRGVLPGTRFAVDAYVHFVREK------------SL------LEAIASSLT-ELFAPQIHSERVAGM 156 (239)
T ss_pred HHHhCCCHHHHhcccCCCHHHHHHHHHHHHHHhcC------------CH------HHHHHHHHH-HHHhHHHHHHHHHhH
Confidence 9999999873 3334899998888777777532 23 367777666 544444433222111
Q ss_pred cCCCCcccccccccccCChhHHHHHH-------HHHHH-HHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 008479 179 NANEGNHPYTKWIDNYSSESFQASAL-------QNEDL-LDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLA 246 (564)
Q Consensus 179 ~~~~~~~~y~~Wi~~y~s~~f~~~v~-------~l~~~-ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a~~~ 246 (564)
..+..|++.=+=.-|..... ...++ ++.. .++++++++.++-+..|..=+.|+|+....
T Consensus 157 ------~~~Y~~~~~e~l~yF~~r~~qa~rd~e~~l~~~l~~~---~t~e~Q~~~l~al~fk~dvLw~~LDal~~a 223 (239)
T TIGR02111 157 ------LQHYDFIDDAALAYFRKRLTQAPRDVEFGLDYVLDHA---TTREKQEAALEALTFKCDVLWAQLDALYFA 223 (239)
T ss_pred ------HHHCCCCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11234665321111222111 11121 3333 367889999999999999999999987443
|
This model describes the coenzyme PQQ (pyrrolo-quinoline-quinone) biosynthesis protein PqqC.In contrast to the broader model pfam05312, this model does not include related proteins likely to be functionally distinct from PqqC, such as homologs found in the Chlamydias. |
| >COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.4e-05 Score=77.31 Aligned_cols=186 Identities=15% Similarity=0.138 Sum_probs=131.9
Q ss_pred hhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH---HHH---HHHHHHHHHHH
Q 008479 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG---VLE---ELKMHDSFVKE 104 (564)
Q Consensus 31 ~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~---i~~---E~~~h~~~~~~ 104 (564)
-..|||.+.+.+|.|+++.++-|++.-++|+++|.+.++...++++|++......+.+.. ..+ =+++-..+...
T Consensus 24 ~~~HpF~~~m~~g~lt~~ql~~yvi~~~~~~k~~p~~lSail~rcdd~~~r~~~leni~de~~g~~e~~hidlwlr~aeA 103 (242)
T COG5424 24 DLPHPFYVAMQEGELTKEQLQGYVINRYYYQKNFPLYLSAILARCDDDDVRREWLENIMDEDNGYNEPNHIDLWLRLAEA 103 (242)
T ss_pred cCCCHHHHHHHccCCCHHHHHHHHHhhhHHHHhhhHHHHHHHhcCCcHhHHHHHHHHHHHHhcCCCCccHHHHHHHHHHH
Confidence 378999999999999999999999999999999999999999999999876544333221 111 24566678888
Q ss_pred hCCCccc--ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 008479 105 WGTDLAK--MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANE 182 (564)
Q Consensus 105 ~gi~~~~--~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~i~~~~~~~~~~~~ 182 (564)
+|++.++ +.+|+|+++.=++.....+..+. .++++++++.-+..=-.|. .... .
T Consensus 104 lGvs~eei~s~eplp~~~~av~~~~~~a~~~s------------------~~~~~aslyt~El~apri~---~~ki---~ 159 (242)
T COG5424 104 LGVSREEILSHEPLPSTRFAVDTWVRFATEKS------------------WLEGAASLYTYELVAPRIS---VEKI---S 159 (242)
T ss_pred cCCCHHHHhhcCCCHHHHHHHHHHHHHhcchh------------------HHHHHHHHHHHHhhccHHH---HHHc---c
Confidence 9999873 45599999999999998886543 3466777765443322322 2211 1
Q ss_pred CcccccccccccCC--------hhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 183 GNHPYTKWIDNYSS--------ESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 183 ~~~~y~~Wi~~y~s--------~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
.-+.|..|++ +.. +.-...+....+++.+++. +.|..+++..+-.+++..=+.|.|+.
T Consensus 160 gl~~~~~~~~-~a~~~yf~~h~eaD~~Ha~Ealkiv~~~~~--t~E~~~~~~~~~~~~~D~lw~fLda~ 225 (242)
T COG5424 160 GLPYFNGFSD-AAAYAYFREHLEADVRHAEEALKIVLELAG--TRELQDQVLDALQKSLDVLWLFLDAR 225 (242)
T ss_pred CchhhcCcch-HHHHHHHHHHHHHhhhhHHHHHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2334555554 111 1224455566667766653 45677888999999999999999976
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.1e-06 Score=93.98 Aligned_cols=96 Identities=18% Similarity=0.233 Sum_probs=68.9
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||+.+++++++++| +++.|+|.+- ...++..++.+|+.. .+.. +.++.-. .+..|...
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g---~~l~IvS~~~-~~~~~~~l~~~~l~~--~f~~-------i~~~d~v----~~~~kP~~ 390 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENN---CSIYIASNGL-TEYLRAIVSYYDLDQ--WVTE-------TFSIEQI----NSLNKSDL 390 (459)
T ss_pred CCCcCCCHHHHHHHHHHCC---CeEEEEeCCc-hHHHHHHHHHCCcHh--hcce-------eEecCCC----CCCCCcHH
Confidence 4688999999999999988 9999999995 899999999887531 1111 1111100 01124455
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccE
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 500 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 500 (564)
+...++..+ ...+++||||.+|+.+...|++..
T Consensus 391 ~~~al~~l~---~~~~v~VGDs~~Di~aAk~AG~~~ 423 (459)
T PRK06698 391 VKSILNKYD---IKEAAVVGDRLSDINAAKDNGLIA 423 (459)
T ss_pred HHHHHHhcC---cceEEEEeCCHHHHHHHHHCCCeE
Confidence 555555443 367999999999999999999843
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=98.47 E-value=5.4e-07 Score=101.61 Aligned_cols=109 Identities=18% Similarity=0.255 Sum_probs=85.9
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHH
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 466 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 466 (564)
++|||..+.++.|++.| ++++++|+.- ....+.+.++.|++ +++++ +++.+|.+.++
T Consensus 446 ~~Rp~a~eaI~~l~~~G---i~v~miTGD~-~~ta~~iA~~lGI~--~v~a~-----------------~~PedK~~~v~ 502 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMG---IKTIMITGDN-RLTAAAIAAEAGVD--DFIAE-----------------ATPEDKIALIR 502 (675)
T ss_pred cchhHHHHHHHHHHHCC---CEEEEEcCCC-HHHHHHHHHHcCCC--EEEcC-----------------CCHHHHHHHHH
Confidence 89999999999999999 9999999986 88899999988863 33331 35678999999
Q ss_pred HHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHHHHHhhCCceeecCchhH
Q 008479 467 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLV 527 (564)
Q Consensus 467 ~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~~~~~~gi~~~p~~~~~~ 527 (564)
++.+. +..+.++|||.||.++|..||+||++++...+++-+. .++-+.+++.
T Consensus 503 ~lq~~-----g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaa----divLldd~~s 554 (675)
T TIGR01497 503 QEQAE-----GKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAA----NMVDLDSDPT 554 (675)
T ss_pred HHHHc-----CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhC----CEEECCCCHH
Confidence 98763 3568899999999999999999999986554443222 5555555443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=98.44 E-value=8.9e-06 Score=79.56 Aligned_cols=98 Identities=17% Similarity=0.236 Sum_probs=69.6
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
...+.||+.++++.++++ ++++|+|.++ ...++..++..++.. ..|++.. + .| ..-.+.
T Consensus 95 ~~~~~~g~~~~L~~l~~~----~~~~i~Sn~~-~~~~~~~l~~~~l~~~fd~i~~~~----~---~~-------~~KP~~ 155 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK----FRLYIVTNGV-RETQYKRLRKSGLFPFFDDIFVSE----D---AG-------IQKPDK 155 (224)
T ss_pred cCeeCccHHHHHHHHHhc----CcEEEEeCCc-hHHHHHHHHHCCcHhhcCEEEEcC----c---cC-------CCCCCH
Confidence 468999999999999874 6999999997 788999998887632 1222211 0 01 111244
Q ss_pred HHHHHHHHHh-CCCCCccEEEEcCCc-cchhhhhhcCcc-EEE
Q 008479 463 QAFNNTLEKY-GTDRKNLSVYIGDSV-GDLLCLLEADIG-IVI 502 (564)
Q Consensus 463 ~~l~~l~~~~-~~~~~~~viyiGDs~-~Dl~~l~~Ad~g-iv~ 502 (564)
..+...++.. +. .+.++++||||. +|+.+...+++. |.+
T Consensus 156 ~~~~~~~~~~~~~-~~~~~v~igD~~~~di~~A~~~G~~~i~~ 197 (224)
T TIGR02254 156 EIFNYALERMPKF-SKEEVLMIGDSLTADIKGGQNAGLDTCWM 197 (224)
T ss_pred HHHHHHHHHhcCC-CchheEEECCCcHHHHHHHHHCCCcEEEE
Confidence 5666666665 54 357899999998 799999999984 444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=98.44 E-value=6e-06 Score=79.61 Aligned_cols=91 Identities=10% Similarity=0.108 Sum_probs=62.2
Q ss_pred CCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHH
Q 008479 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNN 467 (564)
Q Consensus 388 lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~ 467 (564)
..++..++++.++++| +++.|+|++. ...++.+|+..|+.. .+..-+..++ . .. --+...+..
T Consensus 107 ~~~~~~~~L~~l~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~~--~f~~~~~~~~-~---------~~-KP~p~~~~~ 169 (197)
T TIGR01548 107 TLLTPKGLLRELHRAP---KGMAVVTGRP-RKDAAKFLTTHGLEI--LFPVQIWMED-C---------PP-KPNPEPLIL 169 (197)
T ss_pred cccCHHHHHHHHHHcC---CcEEEECCCC-HHHHHHHHHHcCchh--hCCEEEeecC-C---------CC-CcCHHHHHH
Confidence 4456699999999888 9999999996 889999999988632 2211111111 0 00 124455666
Q ss_pred HHHHhCCCCCccEEEEcCCccchhhhhhc
Q 008479 468 TLEKYGTDRKNLSVYIGDSVGDLLCLLEA 496 (564)
Q Consensus 468 l~~~~~~~~~~~viyiGDs~~Dl~~l~~A 496 (564)
.++..+.. +.++++|||+.+|+.+...|
T Consensus 170 ~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 170 AAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 66665553 47899999999999988754
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=6.2e-06 Score=80.90 Aligned_cols=99 Identities=12% Similarity=0.171 Sum_probs=69.4
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
.+.+.||+.++++.+ + +++.|+|.+- ...++..|+..|+... |++.+.++. .....--+...
T Consensus 86 ~~~~~~gv~~~L~~L---~---~~~~ivTn~~-~~~~~~~l~~~~l~~~--------F~~~v~~~~---~~~~~KP~p~~ 147 (221)
T PRK10563 86 ELEPIAGANALLESI---T---VPMCVVSNGP-VSKMQHSLGKTGMLHY--------FPDKLFSGY---DIQRWKPDPAL 147 (221)
T ss_pred cCCcCCCHHHHHHHc---C---CCEEEEeCCc-HHHHHHHHHhcChHHh--------CcceEeeHH---hcCCCCCChHH
Confidence 578899999999988 3 7999999985 7889999988775311 111111111 00011124567
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEE
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
+...++..+.. +..+++|||+.+|+.+...||+.++.
T Consensus 148 ~~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 148 MFHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 77777777653 57899999999999999999996543
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=98.42 E-value=4.3e-06 Score=80.56 Aligned_cols=101 Identities=17% Similarity=0.183 Sum_probs=61.4
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
+...+.||+.++++.+++++ +.+++|.+- ...-...+...++. ..+-. .| +.+.++.. ...|..
T Consensus 71 ~~~~~~pG~~e~L~~L~~~~----~~~i~Tn~~-~~~~~~~~~~~~l~--~~f~~--~f-~~i~~~~~------~~~kp~ 134 (197)
T PHA02597 71 RYLSAYDDALDVINKLKEDY----DFVAVTALG-DSIDALLNRQFNLN--ALFPG--AF-SEVLMCGH------DESKEK 134 (197)
T ss_pred HhccCCCCHHHHHHHHHhcC----CEEEEeCCc-cchhHHHHhhCCHH--HhCCC--cc-cEEEEecc------CcccHH
Confidence 35679999999999998754 677777653 33222234444431 10000 01 11111111 112566
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhc--CccEEEc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA--DIGIVIG 503 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~A--d~giv~~ 503 (564)
.+...+...+ +..++|||||.+|+.+...| |+.++..
T Consensus 135 ~~~~a~~~~~---~~~~v~vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 135 LFIKAKEKYG---DRVVCFVDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred HHHHHHHHhC---CCcEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence 7777777665 35789999999999999999 9864443
|
2 hypothetical protein; Provisional |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=98.39 E-value=8e-06 Score=77.76 Aligned_cols=98 Identities=10% Similarity=0.166 Sum_probs=67.4
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
.+.+.||..++++.++ .+++|+|.+. ...+...++..|+.. ..|++-+- .|. .....--+.
T Consensus 82 ~~~~~~g~~~~L~~L~------~~~~i~Tn~~-~~~~~~~l~~~gl~~~fd~i~~~~~-------~~~---~~~~~KP~p 144 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP------GRKIIFTNGD-RAHARRALNRLGIEDCFDGIFCFDT-------ANP---DYLLPKPSP 144 (184)
T ss_pred hCCCCHHHHHHHHhCC------CCEEEEeCCC-HHHHHHHHHHcCcHhhhCeEEEeec-------ccC---ccCCCCCCH
Confidence 4678899999999886 3689999996 889999999887632 12222210 010 000011244
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 500 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 500 (564)
..+...++..+. .+.++++|||+..|+.+...+|+..
T Consensus 145 ~~~~~~~~~~~~-~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 145 QAYEKALREAGV-DPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHhCC-CccceEEEeCCHHHHHHHHHcCCEE
Confidence 667777776665 3578999999999999999999743
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.38 E-value=5.1e-06 Score=89.38 Aligned_cols=118 Identities=9% Similarity=0.023 Sum_probs=87.3
Q ss_pred hhhccCCCHHHHHHHhhcC-------CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhh-cCCCceeEEeec
Q 008479 368 SGVLKGINLEDIKKAGERL-------SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-AGLNALNVHANE 439 (564)
Q Consensus 368 ~~~f~Gi~~~~i~~~~~~i-------~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~-~g~~~~~I~aN~ 439 (564)
.-.|+|++.+++++.++.+ -+++. .++..++.| .++|||++. ..+++++++. .|. ..|++++
T Consensus 70 ~v~f~Gl~~~die~vaRavlpkf~~~dv~~e---~~~~~~~~g----~~vVVTAsP-rvmVEpFake~LG~--D~VvGTE 139 (498)
T PLN02499 70 FVATAGVHESEIESVARAVLPKFYMDDVDME---AWKVFSSCD----KRVVVTRMP-RVMVERFAKEHLRA--DEVIGSE 139 (498)
T ss_pred HHHhCCCCHHHHHHHHHHHhhHHHHhhCCHH---HHHHHHcCC----eEEEEeCCH-HHHHHHHHHHhcCC--ceEEeee
Confidence 5678999999998876632 23343 445555544 899999998 8999999998 554 6788999
Q ss_pred eeecC-ccccccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEE
Q 008479 440 FSFKE-SISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 440 l~~~~-g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
+++.+ |.+||.+.+.+| +..|.++++++..+ ....+-+||+.+|-..+..+. ++.+
T Consensus 140 L~v~~~G~~TG~~~G~n~-~ek~~~rl~~~~g~-----~~~~vg~~~~~~~~~f~~~ck-~~~~ 196 (498)
T PLN02499 140 LVVNRFGFATGFIRGTDV-DQSVANRVANLFVD-----ERPQLGLGRISASSSFLSLCK-EQIH 196 (498)
T ss_pred EEEeeccEEEEEEecCcc-HHHHHHHHHHHhCc-----cCceecccCCcccchhhhhCc-eEEe
Confidence 99985 999999887655 44447787776642 134678999999988887775 4554
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=98.37 E-value=9.6e-06 Score=76.56 Aligned_cols=92 Identities=15% Similarity=0.146 Sum_probs=65.2
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCch--
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK-- 461 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K-- 461 (564)
+.+.||+.++++.++++| +++.|+|.+. ... ...+.+.|+.. ..|++. . . .+..|
T Consensus 84 ~~~~~g~~~~l~~l~~~g---~~~~i~Tn~~-~~~-~~~~~~~~l~~~f~~i~~~-----------~---~--~~~~KP~ 142 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARG---KKLALLTNSP-RDH-AVLVQELGLRDLFDVVIFS-----------G---D--VGRGKPD 142 (183)
T ss_pred CccCcCHHHHHHHHHHCC---CeEEEEeCCc-hHH-HHHHHhcCCHHHCCEEEEc-----------C---C--CCCCCCC
Confidence 789999999999999988 9999999997 555 55554455421 112211 0 0 11223
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
...++..++..+.. +.++++|||+..|+.+.+.+++.
T Consensus 143 ~~~~~~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 143 PDIYLLALKKLGLK-PEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHHHcCCC-cceEEEEcCCHHHHHHHHHcCCE
Confidence 45666667666653 58899999999999999999973
|
HAD subfamilies caused by an overly broad single model. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.4e-06 Score=98.58 Aligned_cols=94 Identities=20% Similarity=0.265 Sum_probs=78.0
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHH
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 466 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 466 (564)
++|||.++.++.|++.| +.++++||.- ..-.+.+.++.|++ +++|+ +++.+|.++++
T Consensus 445 ~~R~~~~eai~~Lr~~G---I~vvMiTGDn-~~TA~aIA~elGId--~v~A~-----------------~~PedK~~iV~ 501 (679)
T PRK01122 445 IVKPGIKERFAELRKMG---IKTVMITGDN-PLTAAAIAAEAGVD--DFLAE-----------------ATPEDKLALIR 501 (679)
T ss_pred cCchhHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCc--EEEcc-----------------CCHHHHHHHHH
Confidence 78999999999999999 9999999985 78888888888863 22221 35668999999
Q ss_pred HHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhH
Q 008479 467 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSL 508 (564)
Q Consensus 467 ~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L 508 (564)
++.+. +..|.++|||.||-++|..||+||+++..+.+
T Consensus 502 ~lQ~~-----G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv 538 (679)
T PRK01122 502 QEQAE-----GRLVAMTGDGTNDAPALAQADVGVAMNSGTQA 538 (679)
T ss_pred HHHHc-----CCeEEEECCCcchHHHHHhCCEeEEeCCCCHH
Confidence 98863 35678999999999999999999999965433
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.6e-06 Score=97.17 Aligned_cols=95 Identities=24% Similarity=0.326 Sum_probs=78.2
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
..++|||+.++++.++++| ++++|+|++. ...++.++++.|++ ++++- .+.+|.+.
T Consensus 403 ~d~l~~~a~e~i~~Lk~~G---i~v~ilSgd~-~~~a~~ia~~lgi~---~~~~~-----------------~p~~K~~~ 458 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRG---IEPVMLTGDN-RKTAKAVAKELGIN---VRAEV-----------------LPDDKAAL 458 (562)
T ss_pred cccccHHHHHHHHHHHHcC---CeEEEEcCCC-HHHHHHHHHHcCCc---EEccC-----------------ChHHHHHH
Confidence 3579999999999999998 9999999996 89999999998863 33221 23479999
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhH
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSL 508 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L 508 (564)
++++..+ +.+++|||||.||.+++..||+||.++..+.+
T Consensus 459 v~~l~~~-----~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~ 497 (562)
T TIGR01511 459 IKELQEK-----GRVVAMVGDGINDAPALAQADVGIAIGAGTDV 497 (562)
T ss_pred HHHHHHc-----CCEEEEEeCCCccHHHHhhCCEEEEeCCcCHH
Confidence 8888752 46899999999999999999999999855433
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=98.36 E-value=5.2e-06 Score=82.42 Aligned_cols=90 Identities=13% Similarity=0.135 Sum_probs=59.4
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEcccc---CHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCW---CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~---s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
....+++.+|+++++++| ++++|||+.. ....++.+++.+|++.. + ...+ +|.-..+ .-.+|.
T Consensus 113 s~p~~~a~elL~~l~~~G---~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f--~~i~-----~~d~~~~--~Kp~~~ 178 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRG---DAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--N--PVIF-----AGDKPGQ--YQYTKT 178 (237)
T ss_pred CcchhHHHHHHHHHHHCC---CEEEEEeCCCCCcCHHHHHHHHHHhCCchh--e--eEEE-----CCCCCCC--CCCCHH
Confidence 345556999999999999 9999999862 15688888888887432 1 1222 2211110 001243
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 498 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 498 (564)
.+ +.+. ..++||||+.+|+.+...|++
T Consensus 179 ~~----l~~~-----~i~i~vGDs~~DI~aAk~AGi 205 (237)
T TIGR01672 179 QW----IQDK-----NIRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred HH----HHhC-----CCeEEEeCCHHHHHHHHHCCC
Confidence 32 2322 247999999999999999998
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=6.4e-06 Score=78.48 Aligned_cols=94 Identities=13% Similarity=0.034 Sum_probs=66.4
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
.+.+.|| .+++..+++ + +++.|+|++. ...++..|++.|+.. ..|++-+ .....--+.
T Consensus 86 ~~~~~~~-~e~L~~L~~-~---~~l~I~T~~~-~~~~~~~l~~~~l~~~fd~i~~~~--------------~~~~~KP~p 145 (188)
T PRK10725 86 SVEPLPL-IEVVKAWHG-R---RPMAVGTGSE-SAIAEALLAHLGLRRYFDAVVAAD--------------DVQHHKPAP 145 (188)
T ss_pred cCCCccH-HHHHHHHHh-C---CCEEEEcCCc-hHHHHHHHHhCCcHhHceEEEehh--------------hccCCCCCh
Confidence 4566676 689999875 3 6899999997 788999999887632 1222211 001112345
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
..+.......+.. +.+++||||+.+|+.+...||+.
T Consensus 146 ~~~~~~~~~~~~~-~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 146 DTFLRCAQLMGVQ-PTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHHHHcCCC-HHHeEEEeccHhhHHHHHHCCCE
Confidence 6777777776653 57899999999999999999984
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.2e-06 Score=96.83 Aligned_cols=109 Identities=18% Similarity=0.222 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHH
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 466 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 466 (564)
++|||.++.++.|++.| +.++++||-- ..-.+.+.++.|++ ++++ .+++.+|.++++
T Consensus 441 p~R~~a~e~I~~Lr~~G---I~vvMiTGDn-~~TA~aIA~elGI~--~v~A-----------------~~~PedK~~iV~ 497 (673)
T PRK14010 441 VIKDGLVERFRELREMG---IETVMCTGDN-ELTAATIAKEAGVD--RFVA-----------------ECKPEDKINVIR 497 (673)
T ss_pred CCcHHHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCc--eEEc-----------------CCCHHHHHHHHH
Confidence 89999999999999999 9999999984 78888888888863 2222 135678999999
Q ss_pred HHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHHHHHhhCCceeecCchhH
Q 008479 467 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLV 527 (564)
Q Consensus 467 ~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~~~~~~gi~~~p~~~~~~ 527 (564)
++.+. +..+.++|||.||-++|..||+||+++....++ ++-. .++-+.+++.
T Consensus 498 ~lQ~~-----G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvA---keAA-DiVLldd~ls 549 (673)
T PRK14010 498 EEQAK-----GHIVAMTGDGTNDAPALAEANVGLAMNSGTMSA---KEAA-NLIDLDSNPT 549 (673)
T ss_pred HHHhC-----CCEEEEECCChhhHHHHHhCCEEEEeCCCCHHH---HHhC-CEEEcCCCHH
Confidence 98763 356779999999999999999999998554333 2222 5555555443
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.5e-05 Score=77.59 Aligned_cols=104 Identities=12% Similarity=0.095 Sum_probs=65.8
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHH--HHHHHHhhcCCC--ceeEEeeceeecCccccccccccCCCCCc
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD--LIRASFSSAGLN--ALNVHANEFSFKESISTGEIIEKVESPID 460 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~--~I~~~l~~~g~~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 460 (564)
.+.+.||+.++++.++++| +++.|+|.++... .+. .+...++. ...|++.. ..+..
T Consensus 92 ~~~~~~~~~~~L~~L~~~g---~~l~i~Sn~~~~~~~~~~-~~~~~~l~~~fd~v~~s~----------------~~~~~ 151 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKG---FKTACITNNFPTDHSAEE-ALLPGDIMALFDAVVESC----------------LEGLR 151 (211)
T ss_pred ccccChhHHHHHHHHHHCC---CeEEEEeCCCCccchhhh-HhhhhhhHhhCCEEEEee----------------ecCCC
Confidence 5789999999999999988 9999999876221 111 12122220 01222111 01112
Q ss_pred h--HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEcCChhHH
Q 008479 461 K--VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSSLR 509 (564)
Q Consensus 461 K--~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~~~~~L~ 509 (564)
| ...+...++..+. .+.++++|||+..|+.+...+|+ .|.+.....+.
T Consensus 152 KP~p~~~~~~~~~~g~-~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~~~~ 202 (211)
T TIGR02247 152 KPDPRIYQLMLERLGV-APEECVFLDDLGSNLKPAAALGITTIKVSDEEQAI 202 (211)
T ss_pred CCCHHHHHHHHHHcCC-CHHHeEEEcCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 3 3456666666655 35789999999999999999999 45555444443
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=98.23 E-value=2e-06 Score=83.23 Aligned_cols=89 Identities=20% Similarity=0.191 Sum_probs=69.0
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCch--H
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK--V 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K--~ 462 (564)
..++|||..++++.|++.| +++.|+|+.- ......+++..|+....|+++.. ..+..| .
T Consensus 125 ~d~~~~~~~~~l~~L~~~G---i~~~i~TGD~-~~~a~~~~~~lgi~~~~v~a~~~---------------~kP~~k~~~ 185 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAG---IKVAILTGDN-ESTASAIAKQLGIFDSIVFARVI---------------GKPEPKIFL 185 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTT---EEEEEEESSE-HHHHHHHHHHTTSCSEEEEESHE---------------TTTHHHHHH
T ss_pred cCcchhhhhhhhhhhhccC---cceeeeeccc-ccccccccccccccccccccccc---------------ccccchhHH
Confidence 4589999999999999999 9999999885 78889999998874444555543 233456 5
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcC
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 497 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad 497 (564)
++++++. . .+..+++||||.||..|+..||
T Consensus 186 ~~i~~l~----~-~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 186 RIIKELQ----V-KPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHT----C-TGGGEEEEESSGGHHHHHHHSS
T ss_pred HHHHHHh----c-CCCEEEEEccCHHHHHHHHhCc
Confidence 5555543 2 1358999999999999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.3e-06 Score=95.65 Aligned_cols=93 Identities=22% Similarity=0.227 Sum_probs=78.4
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 465 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 465 (564)
=++||+..+.++.|++.| ++++++|+-- ..-.+.+.++.|+ .+++++ ..+.+|.+.+
T Consensus 536 D~~R~~a~~aI~~L~~~G---i~~~mLTGDn-~~~A~~iA~~lGI--d~v~Ae-----------------llPedK~~~V 592 (713)
T COG2217 536 DELRPDAKEAIAALKALG---IKVVMLTGDN-RRTAEAIAKELGI--DEVRAE-----------------LLPEDKAEIV 592 (713)
T ss_pred CCCChhHHHHHHHHHHCC---CeEEEEcCCC-HHHHHHHHHHcCh--Hhhecc-----------------CCcHHHHHHH
Confidence 489999999999999999 9999999984 8889999988886 333332 2455899999
Q ss_pred HHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCCh
Q 008479 466 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 506 (564)
Q Consensus 466 ~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~ 506 (564)
+++.++ +.++.+||||.||-++|..||+||+|+..+
T Consensus 593 ~~l~~~-----g~~VamVGDGINDAPALA~AdVGiAmG~Gt 628 (713)
T COG2217 593 RELQAE-----GRKVAMVGDGINDAPALAAADVGIAMGSGT 628 (713)
T ss_pred HHHHhc-----CCEEEEEeCCchhHHHHhhcCeeEeecCCc
Confidence 999853 467899999999999999999999999753
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.3e-05 Score=76.84 Aligned_cols=120 Identities=22% Similarity=0.287 Sum_probs=93.5
Q ss_pred cCCCHHHHHHHhhc-CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCc-c---
Q 008479 372 KGINLEDIKKAGER-LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKES-I--- 446 (564)
Q Consensus 372 ~Gi~~~~i~~~~~~-i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g-~--- 446 (564)
.|++.+++.++.+. ..|-||+.+.++.+.++ ++-+|+|-++ ..+++.+.+..|++--+++|.++.+|+- +
T Consensus 67 hGVt~~dlrr~sE~sa~lvPgA~etm~~l~~~----~tp~v~STSY-~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~Pee 141 (315)
T COG4030 67 HGVTNRDLRRISELSAKLVPGAEETMATLQER----WTPVVISTSY-TQYLRRTASMIGVPRGELHGTEVDLDSIAVPEE 141 (315)
T ss_pred hcCcHHHHHHHHHhhcccCCChHHHHHHHhcc----CCceEEeccH-HHHHHHHHHhcCCCccccccccccCccccCChH
Confidence 78999999999885 89999999999999876 6888999999 8899999988888777899999988731 0
Q ss_pred --------------cccc------------cc----c------cCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccch
Q 008479 447 --------------STGE------------II----E------KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDL 490 (564)
Q Consensus 447 --------------~tG~------------~~----~------~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl 490 (564)
..|+ +. + +...|..|.++++.+....+. +..+++||||.||.
T Consensus 142 eR~E~L~~~~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~--d~sa~~VGDSItDv 219 (315)
T COG4030 142 EREELLSIIDVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGI--DFSAVVVGDSITDV 219 (315)
T ss_pred HHHHHHHhcCccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCC--CcceeEecCcccch
Confidence 1121 11 1 234566788888887765544 23478999999999
Q ss_pred hhhhhcCc
Q 008479 491 LCLLEADI 498 (564)
Q Consensus 491 ~~l~~Ad~ 498 (564)
.|++.+.-
T Consensus 220 ~ml~~~rg 227 (315)
T COG4030 220 KMLEAARG 227 (315)
T ss_pred HHHHHhhc
Confidence 99999743
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.20 E-value=3.4e-05 Score=92.23 Aligned_cols=94 Identities=16% Similarity=0.119 Sum_probs=69.5
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCC---ceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN---ALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~---~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
.+.||+.++++.|+++| +++.|+|.+. ...++..|++.|+. ...|++.+ . ...+--+.+
T Consensus 161 ~~~pG~~elL~~Lk~~G---~~l~IvSn~~-~~~~~~~L~~~gl~~~~Fd~iv~~~-----~---------~~~~KP~Pe 222 (1057)
T PLN02919 161 IGFPGALELITQCKNKG---LKVAVASSAD-RIKVDANLAAAGLPLSMFDAIVSAD-----A---------FENLKPAPD 222 (1057)
T ss_pred ccCccHHHHHHHHHhCC---CeEEEEeCCc-HHHHHHHHHHcCCChhHCCEEEECc-----c---------cccCCCCHH
Confidence 47899999999999999 9999999986 78899999887763 11222211 0 001112346
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
.+...++..+. .+.++++|||+.+|+.+...|++-
T Consensus 223 ~~~~a~~~lgv-~p~e~v~IgDs~~Di~AA~~aGm~ 257 (1057)
T PLN02919 223 IFLAAAKILGV-PTSECVVIEDALAGVQAARAAGMR 257 (1057)
T ss_pred HHHHHHHHcCc-CcccEEEEcCCHHHHHHHHHcCCE
Confidence 66666766665 357899999999999999999994
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.16 E-value=6.9e-06 Score=96.34 Aligned_cols=111 Identities=17% Similarity=0.218 Sum_probs=80.3
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEee-ceee-cCccccc-----cccccCCCC
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHAN-EFSF-KESISTG-----EIIEKVESP 458 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN-~l~~-~~g~~tG-----~~~~~~~~g 458 (564)
=++||+..+.++.|++.| +.+.++||.- ..-...+.++.|+...++++. ++.- ++..+.. .+-. -+++
T Consensus 514 Dp~R~~~~~aI~~l~~aG---I~vvmiTGD~-~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfA-r~~P 588 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNG---INVKVLTGDN-EIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFA-RLTP 588 (867)
T ss_pred CCCchhHHHHHHHHHHCC---CEEEEEcCCC-HHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEE-ECCH
Confidence 489999999999999999 9999999984 778888888888743233322 1110 0000000 0111 2467
Q ss_pred CchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCCh
Q 008479 459 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 506 (564)
Q Consensus 459 ~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~ 506 (564)
.+|.++++.+.+. +..|.++|||.||.++|+.||+||+++..+
T Consensus 589 e~K~~iV~~lq~~-----G~vVam~GDGvNDapALk~AdVGIAmg~gt 631 (867)
T TIGR01524 589 MQKSRIIGLLKKA-----GHTVGFLGDGINDAPALRKADVGISVDTAA 631 (867)
T ss_pred HHHHHHHHHHHhC-----CCEEEEECCCcccHHHHHhCCEEEEeCCcc
Confidence 8999999998763 356779999999999999999999998544
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.16 E-value=8e-06 Score=75.85 Aligned_cols=85 Identities=19% Similarity=0.322 Sum_probs=68.5
Q ss_pred HHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCC
Q 008479 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 474 (564)
Q Consensus 395 fl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~ 474 (564)
.++.|+++| +.+.|+|++. ...++.+++++|+. .++. | ...|...+++++...+.
T Consensus 36 ~i~~Lk~~G---~~i~IvTn~~-~~~~~~~l~~~gi~--~~~~-----------~--------~~~k~~~~~~~~~~~~~ 90 (154)
T TIGR01670 36 GIRCALKSG---IEVAIITGRK-AKLVEDRCKTLGIT--HLYQ-----------G--------QSNKLIAFSDILEKLAL 90 (154)
T ss_pred HHHHHHHCC---CEEEEEECCC-CHHHHHHHHHcCCC--EEEe-----------c--------ccchHHHHHHHHHHcCC
Confidence 688889888 9999999997 67889999988863 2221 1 02488888988887765
Q ss_pred CCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 475 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 475 ~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
+ +..++|||||.+|+.|+..+++++.+++.
T Consensus 91 ~-~~~~~~vGDs~~D~~~~~~ag~~~~v~~~ 120 (154)
T TIGR01670 91 A-PENVAYIGDDLIDWPVMEKVGLSVAVADA 120 (154)
T ss_pred C-HHHEEEECCCHHHHHHHHHCCCeEecCCc
Confidence 3 47899999999999999999999988744
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.15 E-value=6e-06 Score=92.02 Aligned_cols=91 Identities=22% Similarity=0.275 Sum_probs=75.9
Q ss_pred cCCCCccHHHHHHHHHHcCCCCC-cEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNA-NVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~-~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
.-.+|||..+.++.++++| + ++.|+|+.. ....+.++++.|++ +++++ ..+.+|..
T Consensus 360 ~d~l~~~~~e~i~~L~~~G---i~~v~vvTgd~-~~~a~~i~~~lgi~--~~f~~-----------------~~p~~K~~ 416 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALG---IEKVVMLTGDR-RAVAERVARELGID--EVHAE-----------------LLPEDKLE 416 (536)
T ss_pred eccchHHHHHHHHHHHHcC---CCcEEEEcCCC-HHHHHHHHHHcCCh--hhhhc-----------------cCcHHHHH
Confidence 4589999999999999999 9 999999986 89999999998863 22211 12357999
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
.++++..+ +.+++|||||.||.+++..||+|+.++
T Consensus 417 ~i~~l~~~-----~~~v~~vGDg~nD~~al~~A~vgia~g 451 (536)
T TIGR01512 417 IVKELREK-----YGPVAMVGDGINDAPALAAADVGIAMG 451 (536)
T ss_pred HHHHHHhc-----CCEEEEEeCCHHHHHHHHhCCEEEEeC
Confidence 98888753 368999999999999999999999998
|
. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.6e-05 Score=77.50 Aligned_cols=90 Identities=17% Similarity=0.146 Sum_probs=60.9
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccc---cCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYC---WCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g---~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
..+.||+.++++.++++| +++++||+- -....++.+++.+|++..+.+ .+. ++|.-. .-.+|.
T Consensus 113 a~p~~Ga~elL~~L~~~G---~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f--~vi-----l~gd~~----~K~~K~ 178 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRG---DSIYFITGRTATKTETVSKTLADDFHIPADNMN--PVI-----FAGDKP----GQYTKT 178 (237)
T ss_pred CcchHHHHHHHHHHHHCC---CeEEEEeCCCCcccHHHHHHHHHHcCCCcccce--eEE-----EcCCCC----CCCCHH
Confidence 567888999999999999 999999982 125677777776787423221 112 222211 113455
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 498 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 498 (564)
..++ +. ..++||||+.+|+.+...|++
T Consensus 179 ~~l~----~~-----~i~I~IGDs~~Di~aA~~AGi 205 (237)
T PRK11009 179 QWLK----KK-----NIRIFYGDSDNDITAAREAGA 205 (237)
T ss_pred HHHH----hc-----CCeEEEcCCHHHHHHHHHcCC
Confidence 4433 22 248999999999999999998
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.1e-05 Score=94.80 Aligned_cols=113 Identities=16% Similarity=0.220 Sum_probs=80.3
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEe-eceee-cCccccc-----cccccCCCC
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHA-NEFSF-KESISTG-----EIIEKVESP 458 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~a-N~l~~-~~g~~tG-----~~~~~~~~g 458 (564)
=++||+..+.++.|++.| +.+++|||-- ..-...+.++.|+....+++ .++.. ++..+.. .+-. -+++
T Consensus 549 Dp~R~~a~~aI~~l~~aG---I~v~miTGD~-~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfA-r~sP 623 (903)
T PRK15122 549 DPPKESAAPAIAALRENG---VAVKVLTGDN-PIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFA-KLTP 623 (903)
T ss_pred CccHHHHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEE-EeCH
Confidence 389999999999999999 9999999984 77888888888874222221 11110 0000000 0111 2466
Q ss_pred CchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhH
Q 008479 459 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSL 508 (564)
Q Consensus 459 ~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L 508 (564)
.+|.++++.+.+. +..|.++|||.||.++|..||+||+++..+.+
T Consensus 624 e~K~~iV~~Lq~~-----G~vVamtGDGvNDaPALk~ADVGIAmg~gtdv 668 (903)
T PRK15122 624 LQKSRVLKALQAN-----GHTVGFLGDGINDAPALRDADVGISVDSGADI 668 (903)
T ss_pred HHHHHHHHHHHhC-----CCEEEEECCCchhHHHHHhCCEEEEeCcccHH
Confidence 7999999998863 35677999999999999999999999854433
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=98.07 E-value=4.3e-05 Score=75.06 Aligned_cols=102 Identities=9% Similarity=0.113 Sum_probs=63.0
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHH-HHhhcCCCc--eeEEeeceeecCccccccccccCCCCCc
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA-SFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPID 460 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~-~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 460 (564)
....+.||+.++++.++++| +++.|+|++. ...+.. .++..++.. ..++|.+ + . .+..+--
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g---~~~~i~S~~~-~~~~~~~~~~~~~l~~~f~~i~~~~----~-~-------~~~~~KP 138 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKG---IPIAIATGSH-KRHFDLKTQRHGELFSLMHHVVTGD----D-P-------EVKQGKP 138 (220)
T ss_pred hhCCCCccHHHHHHHHHHCC---CcEEEEeCCc-hhhHHHHHcccHHHHhhCCEEEECC----h-h-------hccCCCC
Confidence 35788999999999999988 9999999886 433332 322222211 1222211 0 0 0001111
Q ss_pred hHHHHHHHHHHhC---CCCCccEEEEcCCccchhhhhhcCccEEE
Q 008479 461 KVQAFNNTLEKYG---TDRKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 461 K~~~l~~l~~~~~---~~~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
+...+...+...+ . .+..++||||+..|+.+.+.|++..+.
T Consensus 139 ~p~~~~~a~~~~~~~~~-~~~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 139 APDIFLAAARRFEDGPV-DPGKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred CcHHHHHHHHHhCCCCC-CccceEEEeccHhhHHHHHHCCCeEEE
Confidence 2345555555443 3 357899999999999999999995433
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.4e-05 Score=93.92 Aligned_cols=111 Identities=15% Similarity=0.193 Sum_probs=80.6
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEee-ceee-cCcccc-----ccccccCCCC
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHAN-EFSF-KESIST-----GEIIEKVESP 458 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN-~l~~-~~g~~t-----G~~~~~~~~g 458 (564)
=++||+..+.++.|++.| +.++++||-- ..-...+.++.|+....+++. ++.- ++.... -.+-. -+++
T Consensus 549 Dp~R~~a~~aI~~l~~aG---I~v~miTGD~-~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfA-r~sP 623 (902)
T PRK10517 549 DPPKETTAPALKALKASG---VTVKILTGDS-ELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFA-RLTP 623 (902)
T ss_pred CcchhhHHHHHHHHHHCC---CEEEEEcCCC-HHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEE-EcCH
Confidence 489999999999999999 9999999984 788888888888753333321 1110 000000 00111 2467
Q ss_pred CchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCCh
Q 008479 459 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 506 (564)
Q Consensus 459 ~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~ 506 (564)
.+|.++++.+.+. +..|.++|||.||.++|+.|||||.++...
T Consensus 624 e~K~~IV~~Lq~~-----G~vVam~GDGvNDaPALk~ADVGIAmg~gt 666 (902)
T PRK10517 624 MHKERIVTLLKRE-----GHVVGFMGDGINDAPALRAADIGISVDGAV 666 (902)
T ss_pred HHHHHHHHHHHHC-----CCEEEEECCCcchHHHHHhCCEEEEeCCcC
Confidence 7999999998863 356779999999999999999999998543
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.2e-05 Score=92.86 Aligned_cols=93 Identities=20% Similarity=0.223 Sum_probs=76.7
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
.-++|||..+.++.++++| ++++++|+.- ....+.+.++.|+. ++++ ....+|...
T Consensus 566 ~d~~r~~a~~~i~~L~~~g---i~~~llTGd~-~~~a~~ia~~lgi~---~~~~-----------------~~p~~K~~~ 621 (741)
T PRK11033 566 QDTLRADARQAISELKALG---IKGVMLTGDN-PRAAAAIAGELGID---FRAG-----------------LLPEDKVKA 621 (741)
T ss_pred ecCCchhHHHHHHHHHHCC---CEEEEEcCCC-HHHHHHHHHHcCCC---eecC-----------------CCHHHHHHH
Confidence 3489999999999999999 9999999985 88899999998863 2211 234589999
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChh
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 507 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~ 507 (564)
++++.+ ...+.+||||.||.++|..||+||.++..+.
T Consensus 622 v~~l~~------~~~v~mvGDgiNDapAl~~A~vgia~g~~~~ 658 (741)
T PRK11033 622 VTELNQ------HAPLAMVGDGINDAPAMKAASIGIAMGSGTD 658 (741)
T ss_pred HHHHhc------CCCEEEEECCHHhHHHHHhCCeeEEecCCCH
Confidence 998764 2479999999999999999999999985543
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.2e-05 Score=92.94 Aligned_cols=110 Identities=16% Similarity=0.163 Sum_probs=79.8
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEE-eeceeecCc--ccc-cc---------cc
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVH-ANEFSFKES--IST-GE---------II 452 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~-aN~l~~~~g--~~t-G~---------~~ 452 (564)
=++||+..+.++.|++.| +.++++||.- ....+.+.++.|+... ++ ++++.-.+. ..+ .+ +-
T Consensus 441 Dp~R~~a~~aI~~l~~aG---I~v~miTGD~-~~tA~~IA~~lGI~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 515 (755)
T TIGR01647 441 DPPRHDTKETIERARHLG---VEVKMVTGDH-LAIAKETARRLGLGTN-IYTADVLLKGDNRDDLPSGELGEMVEDADGF 515 (755)
T ss_pred CCChhhHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCCCC-CcCHHHhcCCcchhhCCHHHHHHHHHhCCEE
Confidence 389999999999999999 9999999984 7888899999887432 22 122110000 000 00 11
Q ss_pred ccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCCh
Q 008479 453 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 506 (564)
Q Consensus 453 ~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~ 506 (564)
. -.++.+|.++++.+.+. +..|.++|||.||.++|..||+||+++..+
T Consensus 516 A-r~~Pe~K~~iV~~lq~~-----G~~VamvGDGvNDapAL~~AdVGIAm~~gt 563 (755)
T TIGR01647 516 A-EVFPEHKYEIVEILQKR-----GHLVGMTGDGVNDAPALKKADVGIAVAGAT 563 (755)
T ss_pred E-ecCHHHHHHHHHHHHhc-----CCEEEEEcCCcccHHHHHhCCeeEEecCCc
Confidence 1 24567999999998763 356889999999999999999999998543
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.8e-05 Score=74.54 Aligned_cols=90 Identities=14% Similarity=0.282 Sum_probs=68.6
Q ss_pred HHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCCCC
Q 008479 397 QKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDR 476 (564)
Q Consensus 397 ~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~ 476 (564)
+.++++| +++.|+|.+- ...++..++++|+. .++. +. ..|...++.+++..+. .
T Consensus 44 ~~L~~~G---i~laIiT~k~-~~~~~~~l~~lgi~--~~f~-------~~------------kpkp~~~~~~~~~l~~-~ 97 (169)
T TIGR02726 44 IVLQLCG---IDVAIITSKK-SGAVRHRAEELKIK--RFHE-------GI------------KKKTEPYAQMLEEMNI-S 97 (169)
T ss_pred HHHHHCC---CEEEEEECCC-cHHHHHHHHHCCCc--EEEe-------cC------------CCCHHHHHHHHHHcCc-C
Confidence 4456667 9999999996 78999999998863 2221 10 2477788888887765 3
Q ss_pred CccEEEEcCCccchhhhhhcCccEEEcC-ChhHHHHH
Q 008479 477 KNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG 512 (564)
Q Consensus 477 ~~~viyiGDs~~Dl~~l~~Ad~giv~~~-~~~L~~~~ 512 (564)
+.+++||||+.||+.|+..|++++++.+ .+.+++.+
T Consensus 98 ~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A 134 (169)
T TIGR02726 98 DAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAA 134 (169)
T ss_pred HHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhC
Confidence 4789999999999999999999999973 45565554
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00026 Score=70.47 Aligned_cols=91 Identities=11% Similarity=0.085 Sum_probs=59.9
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
.+.+.||..++++.+++ + +++.|+|.|- .. ++..|+.. ..|++.. .+ ...--+.
T Consensus 111 ~~~~~~gv~~~L~~L~~-~---~~l~i~Tn~~-~~-----~~~~gl~~~fd~i~~~~----------~~----~~~KP~p 166 (238)
T PRK10748 111 RIDVPQATHDTLKQLAK-K---WPLVAITNGN-AQ-----PELFGLGDYFEFVLRAG----------PH----GRSKPFS 166 (238)
T ss_pred cCCCCccHHHHHHHHHc-C---CCEEEEECCC-ch-----HHHCCcHHhhceeEecc----------cC----CcCCCcH
Confidence 57888999999999985 4 7899999874 33 23444321 1122111 11 0111245
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCC-ccchhhhhhcCccE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGI 500 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~gi 500 (564)
..+...++..+. .+.++++|||+ ..|+.+...+|+..
T Consensus 167 ~~~~~a~~~~~~-~~~~~~~VGD~~~~Di~~A~~aG~~~ 204 (238)
T PRK10748 167 DMYHLAAEKLNV-PIGEILHVGDDLTTDVAGAIRCGMQA 204 (238)
T ss_pred HHHHHHHHHcCC-ChhHEEEEcCCcHHHHHHHHHCCCeE
Confidence 666666666655 35789999999 59999999999843
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.8e-05 Score=94.36 Aligned_cols=109 Identities=21% Similarity=0.257 Sum_probs=79.1
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceee-cCcccccccc------------
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSF-KESISTGEII------------ 452 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~-~~g~~tG~~~------------ 452 (564)
=++||+..+.++.|++.| +.+.+|||.- ..-...+.++.|+.....+.+.-.. ++.+.||.-.
T Consensus 645 Dp~r~~v~~aI~~l~~aG---Ikv~MiTGD~-~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~ 720 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAG---INVHMLTGDF-PETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLK 720 (1053)
T ss_pred cCCchhHHHHHHHHHHCC---CEEEEECCCC-HHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHh
Confidence 489999999999999999 9999999985 7888888888887322111111000 0112333110
Q ss_pred -----ccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 453 -----EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 453 -----~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
-.-+++.+|.++++.+.+. +..+.++|||.||.+||+.||+||+++
T Consensus 721 ~~~~V~ar~sP~~K~~iV~~lq~~-----g~~Vam~GDGvNDapaLk~AdVGIAmg 771 (1053)
T TIGR01523 721 ALCLVIARCAPQTKVKMIEALHRR-----KAFCAMTGDGVNDSPSLKMANVGIAMG 771 (1053)
T ss_pred hcCeEEEecCHHHHHHHHHHHHhc-----CCeeEEeCCCcchHHHHHhCCccEecC
Confidence 0124567999999988763 356789999999999999999999997
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.6e-05 Score=87.45 Aligned_cols=98 Identities=22% Similarity=0.323 Sum_probs=77.4
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
.-.++||+.+.++.++++| .+++.|+|+.- ....+.++++.|++ +++++ +.+.+|...
T Consensus 382 ~d~~~~g~~e~l~~L~~~g--~i~v~ivTgd~-~~~a~~i~~~lgi~--~~f~~-----------------~~p~~K~~~ 439 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAG--GIKLVMLTGDN-RSAAEAVAAELGID--EVHAE-----------------LLPEDKLAI 439 (556)
T ss_pred cccchHhHHHHHHHHHHcC--CCeEEEEeCCC-HHHHHHHHHHhCCC--eeecc-----------------CCHHHHHHH
Confidence 4689999999999998753 17899999986 88999999998862 23322 123478888
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHH
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLR 509 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~ 509 (564)
++++... +.+++|+|||.||.+++..||+|+.++..+.+.
T Consensus 440 v~~l~~~-----~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~ 479 (556)
T TIGR01525 440 VKELQEE-----GGVVAMVGDGINDAPALAAADVGIAMGAGSDVA 479 (556)
T ss_pred HHHHHHc-----CCEEEEEECChhHHHHHhhCCEeEEeCCCCHHH
Confidence 8887752 358999999999999999999999998544443
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.9e-05 Score=92.10 Aligned_cols=108 Identities=19% Similarity=0.184 Sum_probs=77.6
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEE-eeceeec-Ccccc-----ccccccCC
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVH-ANEFSFK-ESIST-----GEIIEKVE 456 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~-aN~l~~~-~g~~t-----G~~~~~~~ 456 (564)
=++||+..+.++.|++.| ++++++||-- ..-...+.++.|+... .++ .+++..- +.... -.+-. -+
T Consensus 578 Dplr~~~~~aI~~l~~aG---I~v~miTGD~-~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfa-r~ 652 (941)
T TIGR01517 578 DPLRPGVREAVQECQRAG---ITVRMVTGDN-IDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLA-RS 652 (941)
T ss_pred CCCchhHHHHHHHHHHCC---CEEEEECCCC-hHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEE-EC
Confidence 389999999999999999 9999999984 7778888888886321 111 1111100 00000 00111 24
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
++.+|.++++.+.+. +..|.++|||.||.++|+.|||||+++
T Consensus 653 sPe~K~~iV~~lq~~-----g~vVam~GDGvNDapALk~AdVGIAmg 694 (941)
T TIGR01517 653 SPLDKQLLVLMLKDM-----GEVVAVTGDGTNDAPALKLADVGFSMG 694 (941)
T ss_pred CHHHHHHHHHHHHHC-----CCEEEEECCCCchHHHHHhCCcceecC
Confidence 667999999998763 356789999999999999999999998
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.3e-05 Score=73.81 Aligned_cols=85 Identities=18% Similarity=0.356 Sum_probs=65.5
Q ss_pred HHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCCC
Q 008479 396 FQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 475 (564)
Q Consensus 396 l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~ 475 (564)
++.++++| +++.|+|+.. ...++.++++.|+. .++. | +..|...++++++..+..
T Consensus 57 i~~L~~~G---i~v~I~T~~~-~~~v~~~l~~lgl~--~~f~-----------g--------~~~k~~~l~~~~~~~gl~ 111 (183)
T PRK09484 57 IRCLLTSG---IEVAIITGRK-SKLVEDRMTTLGIT--HLYQ-----------G--------QSNKLIAFSDLLEKLAIA 111 (183)
T ss_pred HHHHHHCC---CEEEEEeCCC-cHHHHHHHHHcCCc--eeec-----------C--------CCcHHHHHHHHHHHhCCC
Confidence 34455677 9999999986 78899999987752 2221 1 235888999998887763
Q ss_pred CCccEEEEcCCccchhhhhhcCccEEEcCCh
Q 008479 476 RKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 506 (564)
Q Consensus 476 ~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~ 506 (564)
+..++|||||.+|+.|+..|++++++++..
T Consensus 112 -~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~ 141 (183)
T PRK09484 112 -PEQVAYIGDDLIDWPVMEKVGLSVAVADAH 141 (183)
T ss_pred -HHHEEEECCCHHHHHHHHHCCCeEecCChh
Confidence 578999999999999999999998776443
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=3.1e-05 Score=90.81 Aligned_cols=93 Identities=24% Similarity=0.291 Sum_probs=75.9
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 465 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 465 (564)
-++|||..+.++.+++.| +++.++|+.- ....+.++++.|++ +++++ ....+|.+.+
T Consensus 649 d~~r~~a~~~i~~L~~~g---i~v~~~Tgd~-~~~a~~ia~~lgi~--~~~~~-----------------~~p~~K~~~i 705 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAG---YRLVMLTGDN-PTTANAIAKEAGID--EVIAG-----------------VLPDGKAEAI 705 (834)
T ss_pred CcchhhHHHHHHHHHHCC---CeEEEEcCCC-HHHHHHHHHHcCCC--EEEeC-----------------CCHHHHHHHH
Confidence 478999999999999998 9999999985 88889999988863 33321 1133699999
Q ss_pred HHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCCh
Q 008479 466 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 506 (564)
Q Consensus 466 ~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~ 506 (564)
+++... +.++++||||.||.+|+..||+||.+++.+
T Consensus 706 ~~l~~~-----~~~v~~vGDg~nD~~al~~Agvgia~g~g~ 741 (834)
T PRK10671 706 KRLQSQ-----GRQVAMVGDGINDAPALAQADVGIAMGGGS 741 (834)
T ss_pred HHHhhc-----CCEEEEEeCCHHHHHHHHhCCeeEEecCCC
Confidence 988652 467999999999999999999999998553
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.9e-05 Score=91.55 Aligned_cols=107 Identities=14% Similarity=0.223 Sum_probs=76.6
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eE-Eeeceee-cCcccc---c--cccccCCC
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NV-HANEFSF-KESIST---G--EIIEKVES 457 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I-~aN~l~~-~~g~~t---G--~~~~~~~~ 457 (564)
++|||..+.++.|++.| +++.++|+.- ..-...+.++.|+... .+ -..++.- ++.... . .+-. -++
T Consensus 528 p~r~~~~~~i~~l~~~G---i~v~miTGD~-~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfa-r~~ 602 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGG---VRIIMITGDS-QETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFA-RAS 602 (884)
T ss_pred cchhHHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEE-ECC
Confidence 88999999999999999 9999999985 7888888888886321 11 1111110 000000 0 0111 145
Q ss_pred CCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 458 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 458 g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
..+|.++++.+... +..+.++|||.||.++++.||+||.++
T Consensus 603 P~~K~~iv~~lq~~-----g~~v~mvGDGvND~pAl~~AdVGia~g 643 (884)
T TIGR01522 603 PEHKMKIVKALQKR-----GDVVAMTGDGVNDAPALKLADIGVAMG 643 (884)
T ss_pred HHHHHHHHHHHHHC-----CCEEEEECCCcccHHHHHhCCeeEecC
Confidence 67899999887753 367889999999999999999999997
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00018 Score=70.95 Aligned_cols=100 Identities=17% Similarity=0.157 Sum_probs=68.4
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--e-EEeeceeecCccccccccccCCCCC
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--N-VHANEFSFKESISTGEIIEKVESPI 459 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~-I~aN~l~~~~g~~tG~~~~~~~~g~ 459 (564)
...+.+.||..+++..++++| +++.+.|++- ...++.+|...|+... . |.+.+ ...|+..+.
T Consensus 82 ~~~~~~~pGv~~~l~~L~~~~---i~~avaS~s~-~~~~~~~L~~~gl~~~f~~~v~~~d------v~~~KP~Pd----- 146 (221)
T COG0637 82 LEGLKPIPGVVELLEQLKARG---IPLAVASSSP-RRAAERVLARLGLLDYFDVIVTADD------VARGKPAPD----- 146 (221)
T ss_pred hcCCCCCccHHHHHHHHHhcC---CcEEEecCCh-HHHHHHHHHHccChhhcchhccHHH------HhcCCCCCH-----
Confidence 457899999999999999998 9999999985 7789999988775211 1 11111 111211111
Q ss_pred chHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEE
Q 008479 460 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 460 ~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
-+|.. .+..+. .+.++|.|.||.+.+.+.+.|+.-++.
T Consensus 147 ---~yL~A-a~~Lgv-~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 147 ---IYLLA-AERLGV-DPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred ---HHHHH-HHHcCC-ChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 22222 233333 358999999999999999999985444
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00034 Score=70.62 Aligned_cols=116 Identities=14% Similarity=0.151 Sum_probs=74.2
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
...+-||+.+|++.++++| ++++|||..- +.......|+.+|++.. .-..+.+.+ ....|.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G---~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~--~~d~lllr~------------~~~~K~ 178 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKG---VKIFYVSNRSEKEKAATLKNLKRFGFPQA--DEEHLLLKK------------DKSSKE 178 (266)
T ss_pred CCCcCccHHHHHHHHHHCC---CeEEEEeCCCcchHHHHHHHHHHcCcCCC--CcceEEeCC------------CCCCcH
Confidence 5678899999999999999 9999999864 13445567777786421 001111111 123577
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHHhhCCceeecCc
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLYP 524 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~~~gi~~~p~~~ 524 (564)
.+++.+.+.+ .-+++|||..+|+......+ .--. .+..+.+...++|-+|+-|.+
T Consensus 179 ~rr~~I~~~y-----~Ivl~vGD~~~Df~~~~~~~--~~~~~r~~~v~~~~~~fG~~~i~lPN 234 (266)
T TIGR01533 179 SRRQKVQKDY-----EIVLLFGDNLLDFDDFFYKD--KESQDRQALVLQNQEKFGKKFIILPN 234 (266)
T ss_pred HHHHHHHhcC-----CEEEEECCCHHHhhhhhccC--cchHHHHHHHHHHHHHhCCCeEEecC
Confidence 7777665532 34789999999996433322 1100 123467777899999987654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.88 E-value=8e-05 Score=70.62 Aligned_cols=109 Identities=11% Similarity=0.095 Sum_probs=70.7
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccC--------------HHHHHHHHhhcCCCceeEEeeceeecCcccccc
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--------------GDLIRASFSSAGLNALNVHANEFSFKESISTGE 450 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s--------------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~ 450 (564)
++.+.||+.++++.++++| +++.|+|.+-. ..++..++.+.++....++.......+ .+.
T Consensus 24 ~~~~~pgv~e~L~~Lk~~G---~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~---~~~ 97 (176)
T TIGR00213 24 NFEFIDGVIDALRELKKMG---YALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEG---VEE 97 (176)
T ss_pred HeEECCCHHHHHHHHHHCC---CEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcc---ccc
Confidence 3568899999999999999 99999997631 134555666655542233221111110 112
Q ss_pred ccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccE
Q 008479 451 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 500 (564)
Q Consensus 451 ~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 500 (564)
+......+--+...+...+++.+.+ ..++++|||+.+|+.+...|++..
T Consensus 98 ~~~~~~~~KP~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~ 146 (176)
T TIGR00213 98 FRQVCDCRKPKPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKT 146 (176)
T ss_pred ccCCCCCCCCCHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcE
Confidence 2112222233567777777776653 578999999999999999999854
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.85 E-value=6.6e-05 Score=84.84 Aligned_cols=93 Identities=22% Similarity=0.258 Sum_probs=77.6
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 465 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 465 (564)
=++||+....+..|++.| ++++++|+-- +.-.+.+.++.|+ ..|+|+- .+.+|.+.+
T Consensus 722 D~vr~~a~~av~~Lk~~G---i~v~mLTGDn-~~aA~svA~~VGi--~~V~aev-----------------~P~~K~~~I 778 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMG---IKVVMLTGDN-DAAARSVAQQVGI--DNVYAEV-----------------LPEQKAEKI 778 (951)
T ss_pred cccchhHHHHHHHHHhcC---ceEEEEcCCC-HHHHHHHHHhhCc--ceEEecc-----------------CchhhHHHH
Confidence 389999999999999999 9999999864 6678888888774 4555543 345799999
Q ss_pred HHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCCh
Q 008479 466 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 506 (564)
Q Consensus 466 ~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~ 506 (564)
+++.++ ...+.++|||.||-++|..||+||+++..+
T Consensus 779 k~lq~~-----~~~VaMVGDGINDaPALA~AdVGIaig~gs 814 (951)
T KOG0207|consen 779 KEIQKN-----GGPVAMVGDGINDAPALAQADVGIAIGAGS 814 (951)
T ss_pred HHHHhc-----CCcEEEEeCCCCccHHHHhhccceeecccc
Confidence 999874 357899999999999999999999998774
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00019 Score=64.45 Aligned_cols=96 Identities=16% Similarity=0.183 Sum_probs=68.8
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccC-------HHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCC
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWC-------GDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPI 459 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s-------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~ 459 (564)
.+.||+.++++.++++| ++++|+|.+.. ...++.+++..++....++ .++. ..-
T Consensus 25 ~~~~~v~~~l~~L~~~g---~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~------~~K 85 (132)
T TIGR01662 25 ILYPEVPDALAELKEAG---YKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLY----------ACPH------CRK 85 (132)
T ss_pred eeCCCHHHHHHHHHHCC---CEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEE----------ECCC------CCC
Confidence 57899999999999988 99999998741 4678888888776321111 1110 111
Q ss_pred chHHHHHHHHHHhC-CCCCccEEEEcC-CccchhhhhhcCc-cEEE
Q 008479 460 DKVQAFNNTLEKYG-TDRKNLSVYIGD-SVGDLLCLLEADI-GIVI 502 (564)
Q Consensus 460 ~K~~~l~~l~~~~~-~~~~~~viyiGD-s~~Dl~~l~~Ad~-giv~ 502 (564)
.|...+..++...+ . .+.+++|||| +.+|+.++..+++ .|.+
T Consensus 86 P~~~~~~~~~~~~~~~-~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~ 130 (132)
T TIGR01662 86 PKPGMFLEALKRFNEI-DPEESVYVGDQDLTDLQAAKRAGLAFILV 130 (132)
T ss_pred CChHHHHHHHHHcCCC-ChhheEEEcCCCcccHHHHHHCCCeEEEe
Confidence 25567777777763 5 4578999999 7999999999998 4443
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.76 E-value=7.9e-05 Score=65.62 Aligned_cols=90 Identities=21% Similarity=0.241 Sum_probs=64.6
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHH
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 466 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 466 (564)
.+.+...+.++.+... ++++|-|+.- .-++...++-.|++...|++ | .....|.++++
T Consensus 30 klf~ev~e~iqeL~d~----V~i~IASgDr-~gsl~~lae~~gi~~~rv~a-----------~------a~~e~K~~ii~ 87 (152)
T COG4087 30 KLFSEVSETIQELHDM----VDIYIASGDR-KGSLVQLAEFVGIPVERVFA-----------G------ADPEMKAKIIR 87 (152)
T ss_pred EEcHhhHHHHHHHHHh----heEEEecCCc-chHHHHHHHHcCCceeeeec-----------c------cCHHHHHHHHH
Confidence 4566667888888764 7899999874 55676666655543222211 1 12246888999
Q ss_pred HHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 467 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 467 ~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
++.++ ++++++||||.||.++|..||+||+.-
T Consensus 88 eLkk~-----~~k~vmVGnGaND~laLr~ADlGI~ti 119 (152)
T COG4087 88 ELKKR-----YEKVVMVGNGANDILALREADLGICTI 119 (152)
T ss_pred HhcCC-----CcEEEEecCCcchHHHhhhcccceEEe
Confidence 88863 578999999999999999999997764
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00013 Score=76.52 Aligned_cols=104 Identities=16% Similarity=0.171 Sum_probs=69.8
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEcc----ccCHHHHHHH-----------HhhcCCCceeEEeeceeecCcccc
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSY----CWCGDLIRAS-----------FSSAGLNALNVHANEFSFKESIST 448 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~----g~s~~~I~~~-----------l~~~g~~~~~I~aN~l~~~~g~~t 448 (564)
+.+.+.||+.++++.|+++| ++++|+|. |+ +.+++.. ++..++.. +...+ .
T Consensus 27 ~~~~l~pGV~e~L~~Lk~~G---~kL~IvTNq~g~G~-~~~~~~~l~~~~~~i~~iL~~~gl~f-----d~i~i-----~ 92 (354)
T PRK05446 27 DKLAFEPGVIPALLKLQKAG---YKLVMVTNQDGLGT-DSFPQEDFDPPHNLMMQIFESQGIKF-----DEVLI-----C 92 (354)
T ss_pred ccceECcCHHHHHHHHHhCC---CeEEEEECCccccC-ccccHHHHhhHHHHHHHHHHHcCCce-----eeEEE-----e
Confidence 34789999999999999988 99999998 44 3444444 44444321 11111 1
Q ss_pred ccc-cccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc-EEE
Q 008479 449 GEI-IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVI 502 (564)
Q Consensus 449 G~~-~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~ 502 (564)
... ...+.+.-.|...+..++...+. .+.+++||||+.+|+.+...+++. |.+
T Consensus 93 ~~~~sd~~~~rKP~p~~l~~a~~~l~v-~~~~svmIGDs~sDi~aAk~aGi~~I~v 147 (354)
T PRK05446 93 PHFPEDNCSCRKPKTGLVEEYLAEGAI-DLANSYVIGDRETDVQLAENMGIKGIRY 147 (354)
T ss_pred CCcCcccCCCCCCCHHHHHHHHHHcCC-CcccEEEEcCCHHHHHHHHHCCCeEEEE
Confidence 111 01222345567788877776554 357899999999999999999994 444
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00012 Score=86.80 Aligned_cols=109 Identities=20% Similarity=0.197 Sum_probs=75.4
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCcc---cc--------c--c
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESI---ST--------G--E 450 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~---~t--------G--~ 450 (564)
=++|||..+.++.|++.| +++.++|+.- ..-...+.++.|+.. ..+... .+.+.. .. . .
T Consensus 536 Dplr~~v~e~I~~l~~aG---I~v~miTGD~-~~tA~~ia~~~gi~~~~~~v~~~--~~~g~~l~~~~~~~~~~~~~~~~ 609 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAG---IRVIMITGDN-KETAEAICRRIGIFSPDEDVTFK--SFTGREFDEMGPAKQRAACRSAV 609 (917)
T ss_pred CCCchhHHHHHHHHHHCC---CEEEEecCCC-HHHHHHHHHHcCCCCCCccccce--eeeHHHHhhCCHHHHHHhhhcCe
Confidence 389999999999999999 9999999874 778888888887632 111110 011000 00 0 0
Q ss_pred ccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCCh
Q 008479 451 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 506 (564)
Q Consensus 451 ~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~ 506 (564)
+-. -++..+|.++++.+... +..+.++|||.||.+|++.||+||.++...
T Consensus 610 v~a-r~~P~~K~~iV~~lq~~-----g~~va~iGDG~ND~~alk~AdVGia~g~g~ 659 (917)
T TIGR01116 610 LFS-RVEPSHKSELVELLQEQ-----GEIVAMTGDGVNDAPALKKADIGIAMGSGT 659 (917)
T ss_pred EEE-ecCHHHHHHHHHHHHhc-----CCeEEEecCCcchHHHHHhCCeeEECCCCc
Confidence 001 13456898888876642 356778999999999999999999998543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00024 Score=66.22 Aligned_cols=103 Identities=17% Similarity=0.188 Sum_probs=61.4
Q ss_pred CccHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHhh-----cCCCceeEEeece-eecCccccccccccCCCCCc
Q 008479 389 QDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSS-----AGLNALNVHANEF-SFKESISTGEIIEKVESPID 460 (564)
Q Consensus 389 r~G~~efl~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~~-----~g~~~~~I~aN~l-~~~~g~~tG~~~~~~~~g~~ 460 (564)
.||..++++.++++| ++++++|+-- .....+.+|.. ++++...++++.- .+.+ .++++..+. ...=
T Consensus 29 ~~~~~~a~~~l~~~G---~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~--~~~e~i~~~-~~~~ 102 (157)
T smart00775 29 HPGVAKLYRDIQNNG---YKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAA--LHREVISKK-PEVF 102 (157)
T ss_pred CHHHHHHHHHHHHcC---CeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhh--hhcccccCC-HHHH
Confidence 588889999999999 9999999842 12233567766 3454345554431 1100 122221110 0112
Q ss_pred hHHHHHHHHHHhCCCCCccEE-EEcCCccchhhhhhcCc
Q 008479 461 KVQAFNNTLEKYGTDRKNLSV-YIGDSVGDLLCLLEADI 498 (564)
Q Consensus 461 K~~~l~~l~~~~~~~~~~~vi-yiGDs~~Dl~~l~~Ad~ 498 (564)
|...++++...... .....+ .+||..+|..+-..+++
T Consensus 103 K~~~l~~i~~~~~~-~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 103 KIACLRDIKSLFPP-QGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred HHHHHHHHHHhcCC-CCCCEEEEeCCCchhHHHHHHcCC
Confidence 77788887764321 112344 48899999999999987
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00019 Score=65.98 Aligned_cols=104 Identities=14% Similarity=0.152 Sum_probs=69.9
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccC--------------HHHHHHHHhhcCCCceeEEeeceeecCccccccc
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--------------GDLIRASFSSAGLNALNVHANEFSFKESISTGEI 451 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s--------------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~ 451 (564)
+.+.||+.++++.++++| ++++|+|.+-. ...+...+++.|+.....+. ....+...
T Consensus 26 ~~~~~g~~~~l~~Lk~~g---~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~------~~~~~~~~ 96 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAG---YTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLF------CPHHPADN 96 (147)
T ss_pred eEEcCChHHHHHHHHHCC---CEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEE------CCCCCCCC
Confidence 357899999999999999 99999998631 14567777777753111111 11000000
Q ss_pred cccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEE
Q 008479 452 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 502 (564)
Q Consensus 452 ~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~ 502 (564)
....--|...++..++..+. .+.+++||||+..|+.++..+++ .|.+
T Consensus 97 ---~~~~KP~~~~~~~~~~~~~~-~~~e~i~IGDs~~Di~~A~~~Gi~~v~i 144 (147)
T TIGR01656 97 ---CSCRKPKPGLILEALKRLGV-DASRSLVVGDRLRDLQAARNAGLAAVLL 144 (147)
T ss_pred ---CCCCCCCHHHHHHHHHHcCC-ChHHEEEEcCCHHHHHHHHHCCCCEEEe
Confidence 01112366778888877765 35789999999999999999998 4444
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00014 Score=68.49 Aligned_cols=89 Identities=13% Similarity=0.078 Sum_probs=58.0
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchH
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
...+.+.||..++++. +.|+|.+- ..+++..+++.|+... |+ .+.++.- ...+--..
T Consensus 86 ~~~~~~~~g~~~~L~~----------~~i~Tn~~-~~~~~~~l~~~~l~~~--------fd-~v~~~~~---~~~~KP~p 142 (175)
T TIGR01493 86 YKNLPPWPDSAAALAR----------VAILSNAS-HWAFDQFAQQAGLPWY--------FD-RAFSVDT---VRAYKPDP 142 (175)
T ss_pred HhcCCCCCchHHHHHH----------HhhhhCCC-HHHHHHHHHHCCCHHH--------Hh-hhccHhh---cCCCCCCH
Confidence 4467899999999982 67999884 8899999988775311 11 1111110 00111124
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhh
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE 495 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~ 495 (564)
..+....+..+. .+..+++||||..|+.+...
T Consensus 143 ~~f~~~~~~~~~-~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 143 VVYELVFDTVGL-PPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHHHCC-CHHHeEeEecChhhHHHHhc
Confidence 555666666555 35789999999999988765
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00016 Score=73.04 Aligned_cols=54 Identities=20% Similarity=0.302 Sum_probs=44.1
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcC-ChhHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRV 511 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~-~~~L~~~ 511 (564)
.+.+|...++.+++..+.+ .+++++||||.||++|+..|++||+++. .+.+++.
T Consensus 196 ~~~~K~~~l~~l~~~~gi~-~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~ 250 (272)
T PRK10530 196 KGNSKGKRLTQWVEAQGWS-MKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKAR 250 (272)
T ss_pred CCCChHHHHHHHHHHcCCC-HHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHh
Confidence 4556999999999888763 4789999999999999999999999973 3445433
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=5.8e-05 Score=76.39 Aligned_cols=56 Identities=21% Similarity=0.391 Sum_probs=48.7
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
..|.+|...|+.+++..+.+ .++++++|||.||++|+..|++||+++ +.+.+++.|
T Consensus 192 ~~gvsKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A 248 (270)
T PRK10513 192 DKRVNKGTGVKSLAEHLGIK-PEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVA 248 (270)
T ss_pred CCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhc
Confidence 45678999999999988874 478999999999999999999999998 456777776
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00025 Score=66.39 Aligned_cols=104 Identities=21% Similarity=0.208 Sum_probs=71.1
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEcccc--------------CHHHHHHHHhhcCCCceeEE-eeceeecCcccccc
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCW--------------CGDLIRASFSSAGLNALNVH-ANEFSFKESISTGE 450 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~--------------s~~~I~~~l~~~g~~~~~I~-aN~l~~~~g~~tG~ 450 (564)
+.+-||..++++.++++| ++++|+|..- ....+..++.++|+....++ |-... .+.
T Consensus 28 ~~~~pgv~e~L~~L~~~g---~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~------~~~ 98 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAG---YKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFP------DDN 98 (161)
T ss_pred eeECCCHHHHHHHHHHCC---CeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCC------CCC
Confidence 578899999999999998 9999999741 14577888888886421222 20000 001
Q ss_pred ccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEc
Q 008479 451 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 503 (564)
Q Consensus 451 ~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~ 503 (564)
....--|...+....+..+. .+++++||||+.+|+.++..+++ ++.+.
T Consensus 99 ----~~~~KP~~~~~~~~~~~~~~-~~~e~l~IGD~~~Di~~A~~aGi~~i~~~ 147 (161)
T TIGR01261 99 ----CDCRKPKIKLLEPYLKKNLI-DKARSYVIGDRETDMQLAENLGIRGIQYD 147 (161)
T ss_pred ----CCCCCCCHHHHHHHHHHcCC-CHHHeEEEeCCHHHHHHHHHCCCeEEEEC
Confidence 11112355677777776655 34789999999999999999999 44443
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=6.7e-05 Score=75.78 Aligned_cols=57 Identities=21% Similarity=0.302 Sum_probs=49.1
Q ss_pred CCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 455 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 455 ~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
...+.+|...|+.+.+..+.+ .++++++|||.||++|+..|++||+++ +.+.+++.|
T Consensus 185 ~~~gvsKg~al~~l~~~lgi~-~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A 242 (266)
T PRK10976 185 MAGGVSKGHALEAVAKKLGYS-LKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLL 242 (266)
T ss_pred EcCCCChHHHHHHHHHHcCCC-HHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhC
Confidence 345678999999999988874 478999999999999999999999998 556777766
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00057 Score=69.33 Aligned_cols=126 Identities=17% Similarity=0.125 Sum_probs=73.7
Q ss_pred hhccCCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeeceeecCc-
Q 008479 369 GVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKES- 445 (564)
Q Consensus 369 ~~f~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g- 445 (564)
.-|..++.++|.++-. |. .+--+..+++. ..-| ++.+++ ..-.+..+.+.|+..+ .-+.+-+.|.++
T Consensus 119 ~gF~d~t~~ei~~~TG---L~---~~~A~~A~~Re-~SEp-~~w~~~--~~~~~~~~~~~g~~~~~GgRf~H~l~~~~~~ 188 (302)
T PRK12702 119 IGFGDWTASELAAATG---IP---LEEAERAQKRE-YSEI-FSYSGD--PARLREAFAQQEANLTQHLLRLHQLHFSDLP 188 (302)
T ss_pred eehhhCCHHHHHHHhC---cC---HHHHHHHHhcc-CCcc-eEecCC--HHHHHHHHHHcCCeEEecCceEEeccccccc
Confidence 3455567777776521 11 11122223332 2233 445654 2333777777775322 012233333332
Q ss_pred --cccccccccCCC---CCchHHHHHHHHHHhCCC-CCccEEEEcCCccchhhhhhcCccEEEcC
Q 008479 446 --ISTGEIIEKVES---PIDKVQAFNNTLEKYGTD-RKNLSVYIGDSVGDLLCLLEADIGIVIGS 504 (564)
Q Consensus 446 --~~tG~~~~~~~~---g~~K~~~l~~l~~~~~~~-~~~~viyiGDs~~Dl~~l~~Ad~giv~~~ 504 (564)
..||-+.+.... +.+|.+.++.++..+... ..-.+|.+|||.||++||+.+|++|+|..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi~~ 253 (302)
T PRK12702 189 QWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVLPS 253 (302)
T ss_pred ccccccccccccccccCCCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEecC
Confidence 356665555555 789999988887765431 23478999999999999999999999953
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00019 Score=84.69 Aligned_cols=109 Identities=17% Similarity=0.214 Sum_probs=77.5
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCcee---EE--eeceeec-Cccccc-----ccccc
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALN---VH--ANEFSFK-ESISTG-----EIIEK 454 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~---I~--aN~l~~~-~g~~tG-----~~~~~ 454 (564)
-++||+.++.++.|++.| +.+.+++|-- ..-...+.++.|+.... ++ ..++..- +..+.. .+-.+
T Consensus 546 Dppr~~v~~aI~~l~~AG---I~v~MiTGD~-~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfAR 621 (917)
T COG0474 546 DPPREDVKEAIEELREAG---IKVWMITGDH-VETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFAR 621 (917)
T ss_pred CCCCccHHHHHHHHHHCC---CcEEEECCCC-HHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEE
Confidence 489999999999999999 9999999974 77777888887753221 11 1111110 000000 01112
Q ss_pred CCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcC
Q 008479 455 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 504 (564)
Q Consensus 455 ~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~ 504 (564)
+++..|.++++.+.+. +..+-+.|||.||.+||+.|||||.++.
T Consensus 622 -vsP~qK~~IV~~lq~~-----g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 622 -VSPEQKARIVEALQKS-----GHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred -cCHHHHHHHHHHHHhC-----CCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 4667999999998874 3566799999999999999999998885
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0002 Score=85.41 Aligned_cols=109 Identities=19% Similarity=0.163 Sum_probs=74.9
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeE---Ee----------eceeecCcccccc
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNV---HA----------NEFSFKESISTGE 450 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I---~a----------N~l~~~~g~~tG~ 450 (564)
=++||+..+.++.+++.| ++++++||-- ..-+..+.++.|+-. ... +. |.-....-+.+|.
T Consensus 567 Dplr~~v~~aI~~l~~~G---i~v~~~TGd~-~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~ 642 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAG---IKVIMVTGDH-PITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGS 642 (997)
T ss_pred CCChHHHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhH
Confidence 489999999999999999 9999999874 777888888877521 000 00 0000000012221
Q ss_pred c---------c---c-------cCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 451 I---------I---E-------KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 451 ~---------~---~-------~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
- . . --.+..+|.++++.+.+. +..+.++|||.||.+||+.||+||+++
T Consensus 643 ~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-----g~vv~~~GDG~ND~paLk~AdVGiamg 709 (997)
T TIGR01106 643 DLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-----GAIVAVTGDGVNDSPALKKADIGVAMG 709 (997)
T ss_pred HhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-----CCEEEEECCCcccHHHHhhCCcceecC
Confidence 1 0 0 012456899999988752 356779999999999999999999997
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00011 Score=74.65 Aligned_cols=78 Identities=15% Similarity=0.146 Sum_probs=58.3
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHHhhCCceee--cCchhHHhHHh
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIP--LYPGLVKKQKE 532 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~~~gi~~~p--~~~~~~~~~~~ 532 (564)
..+.+|...|+.+.+..+++ .++++++|||.||++|+..|++||+++ +.+.+++.|... .+.+ =.+|+...+++
T Consensus 184 ~~g~sKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~--~v~~~n~edGva~~l~~ 260 (272)
T PRK15126 184 PVGCNKGAALAVLSQHLGLS-LADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHL--PVIGHCRNQAVSHYLTH 260 (272)
T ss_pred cCCCChHHHHHHHHHHhCCC-HHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCC--eecCCCcchHHHHHHHH
Confidence 35668999999999988874 478999999999999999999999998 446777666321 1222 22466666766
Q ss_pred hhcC
Q 008479 533 YTEG 536 (564)
Q Consensus 533 ~~~~ 536 (564)
+...
T Consensus 261 ~~~~ 264 (272)
T PRK15126 261 WLDY 264 (272)
T ss_pred HhcC
Confidence 6543
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00015 Score=73.15 Aligned_cols=58 Identities=21% Similarity=0.336 Sum_probs=49.4
Q ss_pred CCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHH
Q 008479 455 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGS 513 (564)
Q Consensus 455 ~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~ 513 (564)
...|.+|...++.+.+..+.+ ..+++++|||.||++|+..|+.||+++ +.+.+++++.
T Consensus 184 ~~~g~~K~~al~~l~~~lgi~-~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~ 242 (264)
T COG0561 184 TPKGVSKGYALQRLAKLLGIK-LEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELAD 242 (264)
T ss_pred ecCCCchHHHHHHHHHHhCCC-HHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCC
Confidence 345778999999999988874 478999999999999999999999998 4467777765
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00015 Score=71.49 Aligned_cols=57 Identities=23% Similarity=0.317 Sum_probs=47.6
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHH
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGS 513 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~ 513 (564)
..+.+|...++.+++..+.+ ..+++++|||.||++|+..+|+||+++ +.+.++++|.
T Consensus 182 ~~~vsK~~ai~~l~~~~~i~-~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~ 239 (254)
T PF08282_consen 182 PKGVSKGSAIKYLLEYLGIS-PEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAAD 239 (254)
T ss_dssp ETTSSHHHHHHHHHHHHTTS-GGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSS
T ss_pred eCCCCHHHHHHHHhhhcccc-cceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCC
Confidence 35678999999999888774 479999999999999999999999998 4466776663
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0004 Score=77.98 Aligned_cols=107 Identities=18% Similarity=0.208 Sum_probs=80.5
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCcccccc-ccc-----------
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGE-IIE----------- 453 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~-~~~----------- 453 (564)
=+.||+..+-++.|++.| +.+++|+|-. ..-...+.++.| ++++.-.+.+-.+||+ |+.
T Consensus 583 DPPR~ev~~ai~~c~~aG---IrV~mITGD~-~~TA~AI~r~iG-----i~~~~ed~~~~~~TG~efD~ls~~~~~~~~~ 653 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAG---IRVIMITGDN-KETAEAIAREIG-----IFSEDEDVSSMALTGSEFDDLSDEELDDAVR 653 (972)
T ss_pred CCCchhHHHHHHHHHHcC---CEEEEEcCCC-HHHHHHHHHHhC-----CCcCCccccccccchhhhhcCCHHHHHHHhh
Confidence 489999999999999999 9999999985 777788877766 3444444444445552 220
Q ss_pred -----cCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CCh
Q 008479 454 -----KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSS 506 (564)
Q Consensus 454 -----~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~ 506 (564)
--+.+..|.++++.+.+. ++-+-+-|||+||-++|+.|||||++| ..+
T Consensus 654 ~~~vFaR~~P~HK~kIVeaLq~~-----geivAMTGDGVNDApALK~AdIGIAMG~~GT 707 (972)
T KOG0202|consen 654 RVLVFARAEPQHKLKIVEALQSR-----GEVVAMTGDGVNDAPALKKADIGIAMGISGT 707 (972)
T ss_pred cceEEEecCchhHHHHHHHHHhc-----CCEEEecCCCccchhhhhhcccceeecCCcc
Confidence 023456899999988763 244557999999999999999999999 443
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00064 Score=64.65 Aligned_cols=103 Identities=15% Similarity=0.059 Sum_probs=64.0
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEcccc-------C-------HHHHHHHHhhcCCCceeEEeeceeecCccccccc
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCW-------C-------GDLIRASFSSAGLNALNVHANEFSFKESISTGEI 451 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~-------s-------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~ 451 (564)
+.+.||+.+++++++++| +++.|+|.+- . .+.+...+++.|+....++.... ..+.
T Consensus 28 ~~~~pgv~e~L~~Lk~~g---~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~------~~~~- 97 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAG---YRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPH------HPED- 97 (181)
T ss_pred eEECCCHHHHHHHHHHCC---CEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCC------CCCC-
Confidence 467899999999999998 9999999752 1 13344556555532111111000 0000
Q ss_pred cccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEE
Q 008479 452 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 501 (564)
Q Consensus 452 ~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 501 (564)
.....--+...+...+...+. .+.++++|||+.+|+.+...+++.++
T Consensus 98 --~~~~~KP~p~~~~~~~~~l~~-~~~~~~~VgDs~~Di~~A~~aG~~~i 144 (181)
T PRK08942 98 --GCDCRKPKPGMLLSIAERLNI-DLAGSPMVGDSLRDLQAAAAAGVTPV 144 (181)
T ss_pred --CCcCCCCCHHHHHHHHHHcCC-ChhhEEEEeCCHHHHHHHHHCCCeEE
Confidence 001111234566666666655 35789999999999999999998433
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00031 Score=77.70 Aligned_cols=87 Identities=22% Similarity=0.242 Sum_probs=71.8
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 465 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 465 (564)
-++||+..+.++.+++.| +.++++|+.- ......+.++.|+ + ....+.+|.+.+
T Consensus 346 d~lr~~~~~~i~~l~~~g---i~~~~ltGD~-~~~a~~ia~~lgi-----~-----------------~~~~p~~K~~~v 399 (499)
T TIGR01494 346 DPLRDDAKETISELREAG---IRVIMLTGDN-VLTAKAIAKELGI-----F-----------------ARVTPEEKAALV 399 (499)
T ss_pred CCCchhHHHHHHHHHHCC---CeEEEEcCCC-HHHHHHHHHHcCc-----e-----------------eccCHHHHHHHH
Confidence 489999999999999988 8999999985 7777777776553 1 114566899999
Q ss_pred HHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 466 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 466 ~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
+++... +..+.++|||.||.+++..||+||+++
T Consensus 400 ~~l~~~-----g~~v~~vGDg~nD~~al~~Advgia~~ 432 (499)
T TIGR01494 400 EALQKK-----GRVVAMTGDGVNDAPALKKADVGIAMG 432 (499)
T ss_pred HHHHHC-----CCEEEEECCChhhHHHHHhCCCccccc
Confidence 988642 357899999999999999999999997
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00046 Score=82.94 Aligned_cols=112 Identities=13% Similarity=0.109 Sum_probs=77.7
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCC--ceeEEee-----------ceeec---C----
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN--ALNVHAN-----------EFSFK---E---- 444 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~--~~~I~aN-----------~l~~~---~---- 444 (564)
.-++||+..+.++.|++.| +.++++||.- ..-...+.++.|+- ...++.- .+.+. +
T Consensus 654 ~d~lr~~~~~~I~~l~~ag---i~v~miTGD~-~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1054)
T TIGR01657 654 ENPLKPDTKEVIKELKRAS---IRTVMITGDN-PLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFA 729 (1054)
T ss_pred ecCCCccHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccc
Confidence 3489999999999999999 9999999984 77777888888862 1122210 11000 0
Q ss_pred ------------------------cccccccc---------------c-----cCCCCCchHHHHHHHHHHhCCCCCccE
Q 008479 445 ------------------------SISTGEII---------------E-----KVESPIDKVQAFNNTLEKYGTDRKNLS 480 (564)
Q Consensus 445 ------------------------g~~tG~~~---------------~-----~~~~g~~K~~~l~~l~~~~~~~~~~~v 480 (564)
-..||... . --+++.+|.++++.+.+. +..|
T Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~-----g~~V 804 (1054)
T TIGR01657 730 STQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL-----DYTV 804 (1054)
T ss_pred cccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC-----CCeE
Confidence 01223110 0 024567888888887752 3567
Q ss_pred EEEcCCccchhhhhhcCccEEEcCC
Q 008479 481 VYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 481 iyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
-++|||.||.++|+.||+||.++..
T Consensus 805 ~m~GDG~ND~~ALK~AdVGIam~~~ 829 (1054)
T TIGR01657 805 GMCGDGANDCGALKQADVGISLSEA 829 (1054)
T ss_pred EEEeCChHHHHHHHhcCcceeeccc
Confidence 7999999999999999999999843
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0002 Score=70.22 Aligned_cols=55 Identities=20% Similarity=0.289 Sum_probs=46.3
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
.+.+|...++.+++..+.+ ..++++||||.||+.|+..+++|++++ +.+.+++.+
T Consensus 146 ~~~~K~~~i~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A 201 (225)
T TIGR01482 146 QGVNKGVAVKKLKEKLGIK-PGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWA 201 (225)
T ss_pred CCCCHHHHHHHHHHHhCCC-HHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhc
Confidence 4568999999999888764 478999999999999999999999998 445666555
|
catalyze the same reaction as SPP. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00023 Score=69.50 Aligned_cols=56 Identities=18% Similarity=0.258 Sum_probs=46.7
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
..+.+|...++.+++..+.+ ..++++||||.||++|+..|++|++++ +.+.+++.|
T Consensus 143 ~~~~~K~~~i~~l~~~~~i~-~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A 199 (215)
T TIGR01487 143 KKGVDKGVGVEKLKELLGIK-PEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIA 199 (215)
T ss_pred cCCCChHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhC
Confidence 35678999999999887764 367999999999999999999999998 445677665
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00026 Score=69.66 Aligned_cols=56 Identities=23% Similarity=0.341 Sum_probs=47.0
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
..+.+|...++.+++..+.+ ..+++++|||.||++|+..|++|++++ +.+.+++.|
T Consensus 153 ~~~~~Kg~al~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a 209 (230)
T PRK01158 153 SPGVNKGTGLKKLAELMGID-PEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAA 209 (230)
T ss_pred eCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhc
Confidence 34567999999999887763 478999999999999999999999997 456677655
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.014 Score=57.14 Aligned_cols=99 Identities=18% Similarity=0.201 Sum_probs=69.3
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCch-
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK- 461 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K- 461 (564)
.++..|+..++++.++++ .+++|+|.|. .......+++.|+.. ..|++.+ ..|..|
T Consensus 97 ~~~~~~~~~~~L~~l~~~----~~l~ilTNg~-~~~~~~~l~~~gl~~~Fd~v~~s~----------------~~g~~KP 155 (229)
T COG1011 97 LLPDYPEALEALKELGKK----YKLGILTNGA-RPHQERKLRQLGLLDYFDAVFISE----------------DVGVAKP 155 (229)
T ss_pred hCccChhHHHHHHHHHhh----ccEEEEeCCC-hHHHHHHHHHcCChhhhheEEEec----------------ccccCCC
Confidence 378899999999998865 6899999986 788889998887521 1122111 111223
Q ss_pred -HHHHHHHHHHhCCCCCccEEEEcCCccch-hhhhhcCc-cEEEcCC
Q 008479 462 -VQAFNNTLEKYGTDRKNLSVYIGDSVGDL-LCLLEADI-GIVIGSS 505 (564)
Q Consensus 462 -~~~l~~l~~~~~~~~~~~viyiGDs~~Dl-~~l~~Ad~-giv~~~~ 505 (564)
.++++..++..+.+ +.++++||||.... .....+|. +|.+...
T Consensus 156 ~~~~f~~~~~~~g~~-p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~ 201 (229)
T COG1011 156 DPEIFEYALEKLGVP-PEEALFVGDSLENDILGARALGMKTVWINRG 201 (229)
T ss_pred CcHHHHHHHHHcCCC-cceEEEECCChhhhhHHHHhcCcEEEEECCC
Confidence 25666667766653 57899999987555 99999998 6677533
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00027 Score=78.97 Aligned_cols=57 Identities=21% Similarity=0.305 Sum_probs=49.2
Q ss_pred CCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 455 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 455 ~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
...|.+|...|+.+++..+++ .+++++||||.||++|+..|++||+|+ +.+.+++.|
T Consensus 502 ~p~gvSKG~ALk~L~e~lGI~-~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~A 559 (580)
T PLN02887 502 VPPGTSKGNGVKMLLNHLGVS-PDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVA 559 (580)
T ss_pred ecCCCCHHHHHHHHHHHcCCC-HHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhC
Confidence 345678999999999988874 478999999999999999999999998 556777766
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0003 Score=64.76 Aligned_cols=93 Identities=12% Similarity=0.067 Sum_probs=60.4
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
.+.+|||+.+|+++++ ++ +++.|+|.+- ..+++.+++..++.. .+-..+...+... ..|..+
T Consensus 43 ~v~l~pG~~e~L~~L~-~~---~~l~I~Ts~~-~~~~~~il~~l~~~~--~~f~~i~~~~d~~-----------~~KP~~ 104 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-EL---FELVVFTAGL-RMYADPVLDLLDPKK--YFGYRRLFRDECV-----------FVKGKY 104 (148)
T ss_pred EEEECCCHHHHHHHHH-hc---cEEEEEeCCc-HHHHHHHHHHhCcCC--CEeeeEEECcccc-----------ccCCeE
Confidence 4688999999999998 46 8999999995 899999998876521 0111111111110 012112
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcC
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 497 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad 497 (564)
++. ++..+. .+.++|+||||.+|+.+...++
T Consensus 105 ~k~-l~~l~~-~p~~~i~i~Ds~~~~~aa~~ng 135 (148)
T smart00577 105 VKD-LSLLGR-DLSNVIIIDDSPDSWPFHPENL 135 (148)
T ss_pred eec-HHHcCC-ChhcEEEEECCHHHhhcCccCE
Confidence 222 222233 3578999999999999887776
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0016 Score=64.21 Aligned_cols=100 Identities=11% Similarity=0.105 Sum_probs=69.2
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc-eeEEeeceeecCccccccccccCCCCCchHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA-LNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~-~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
...+.||+.++++.++++| ++++|+|.+ +....+.++++.+... ...+..- |+. . .| .-.+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G---~~l~I~Sn~-s~~~~~~~~~~~~~~~L~~~f~~~--fd~-~-~g--------~KP~p~ 156 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLG---LRLAVYSSG-SVPAQKLLFGHSDAGNLTPYFSGY--FDT-T-VG--------LKTEAQ 156 (220)
T ss_pred ccCcCcCHHHHHHHHHHCC---CEEEEEeCC-CHHHHHHHHhhccccchhhhcceE--EEe-C-cc--------cCCCHH
Confidence 4679999999999999999 999999988 4777777776532101 1111111 110 0 11 122456
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEE
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 501 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 501 (564)
.+..+++..+.+ +.+++||||+..|+.++..||+..+
T Consensus 157 ~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 157 SYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred HHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 677777776653 5789999999999999999999433
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.002 Score=61.00 Aligned_cols=101 Identities=16% Similarity=0.171 Sum_probs=63.4
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHH--------HHHHHHhhcCCCceeEEeeceeecCccccccccccCCC
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD--------LIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVES 457 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~--------~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~ 457 (564)
+.+.||..+++++++++| +++.|+|.+- .. -+...++..|+. .++. ....++. ....
T Consensus 27 ~~~~pgv~e~L~~Lk~~G---~~l~I~Tn~~-~~~~~~~~~~~~~~~l~~~g~~--~~~~------~~~~~~~---~~~~ 91 (173)
T PRK06769 27 FTLFPFTKASLQKLKANH---IKIFSFTNQP-GIADGIATIADFVQELKGFGFD--DIYL------CPHKHGD---GCEC 91 (173)
T ss_pred eEECCCHHHHHHHHHHCC---CEEEEEECCc-hhcCCcCCHHHHHHHHHhCCcC--EEEE------CcCCCCC---CCCC
Confidence 457899999999999998 9999999753 21 122224554542 2211 0000010 0001
Q ss_pred CCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEE
Q 008479 458 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 502 (564)
Q Consensus 458 g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~ 502 (564)
.--+...+...++..+. .+.+++||||+.+|+.+...|++ +|.+
T Consensus 92 ~KP~p~~~~~~~~~l~~-~p~~~i~IGD~~~Di~aA~~aGi~~i~v 136 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGL-DLTQCAVIGDRWTDIVAAAKVNATTILV 136 (173)
T ss_pred CCCCHHHHHHHHHHcCC-CHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 11244666677766654 35789999999999999999998 4444
|
|
| >CHL00168 pbsA heme oxygenase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.094 Score=52.12 Aligned_cols=195 Identities=17% Similarity=0.174 Sum_probs=115.4
Q ss_pred hHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHH
Q 008479 15 GLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKL-SISELRKGVLE 93 (564)
Q Consensus 15 ~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~-~l~~~~~~i~~ 93 (564)
+|+.+|-......-..+-+.+|++.+-.|.++.+.++.+|.|=|+.-...-.+..... +++-... .+-+ +.+
T Consensus 4 ~ls~~Lr~~T~~~H~~aE~~~f~k~ll~g~~~~~~Y~~ll~~ly~vY~aLE~~l~~~~---~~~~~~~~~~pe----L~R 76 (238)
T CHL00168 4 NLATQLREGTTKSHSMAENVSFVKSFLGGVIDKKSYRKLVANLYFVYSAIEEEIEKNK---EHPLIKPIYFQE----LNR 76 (238)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHcc---CCcccccccchh----hhh
Confidence 6888887776655556678999999999999999999999997776655555444332 1111000 0000 111
Q ss_pred HHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHH-HHHHH-HH--
Q 008479 94 ELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSP-CMRLY-AF-- 169 (564)
Q Consensus 94 E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~p-C~~~Y-~~-- 169 (564)
--.+-.++.--.|-+..+..+|+|+++.|++.+..++.++. . ++.+ |+-.| ..
T Consensus 77 ~~aLe~DL~~l~G~~w~~~~~p~pa~~~Yv~rI~~~~~~~P--------------------~---~LvAH~YvrYLGdls 133 (238)
T CHL00168 77 KESLEKDLNYYYGDDWKSIIEPSPATKIYVDRIHKISAKKP--------------------E---LLIAHAYTRYLGDLS 133 (238)
T ss_pred hHHHHHHHHHHcCCCccccCCCChHHHHHHHHHHHHhhcCh--------------------H---HHHHHHHHHHHHhcc
Confidence 01111122222354444567899999999999999986432 2 3334 55666 22
Q ss_pred ----HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 170 ----LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 170 ----i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
|.+.+.+..+.. + ..--.+.+++.-++-...-..+.+.+|++ .+++++++++.+-=..+-.+-...+.+-
T Consensus 134 GGQiI~k~l~r~~gl~-~-~~G~~Fy~F~~i~~~~~fk~~yr~~Ld~l--~l~e~e~~~iI~EA~~AF~lN~~vf~eL 207 (238)
T CHL00168 134 GGQILKKIAQRAMNLS-D-SGGLAFYDFDNIEDDQEFKQIYKAALDNL--PLSDDQIQNIIAEANIAFNLNMKMFQEL 207 (238)
T ss_pred ccHHHHHHHHHHhCCC-C-CcCccccCCCCcCcHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223233322211 1 11112223333234567778889999976 4788888887777777777666666654
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.00038 Score=70.70 Aligned_cols=47 Identities=23% Similarity=0.273 Sum_probs=41.9
Q ss_pred CCCCchHHHHHHHHHHhCC---CCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 456 ESPIDKVQAFNNTLEKYGT---DRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~---~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
..+.+|...++.+++..+. + ..+++++|||.||++|+..|++||+|+
T Consensus 183 ~~g~sKg~al~~l~~~lgi~~~~-~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 183 DASAGKDQAANWLIATYQQLSGT-RPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred cCCCCHHHHHHHHHHHHHhhcCC-CceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 3577899999999988876 4 478999999999999999999999998
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0022 Score=60.29 Aligned_cols=93 Identities=14% Similarity=0.173 Sum_probs=63.9
Q ss_pred CCccHHHHHHHHHHcCCCCCcEEEEccccCH------------HHHHHHHhhcCCCceeEEeeceeecCccccccccccC
Q 008479 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCG------------DLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKV 455 (564)
Q Consensus 388 lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~------------~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~ 455 (564)
+-||..++++.++++| +++.|+|.+- . ..++.+++++|+....+++.. + +.
T Consensus 43 ~~pgv~e~L~~Lk~~G---~~l~I~TN~~-~~~~~~~~~~~~~~~i~~~l~~~gl~~~~ii~~~-----~---~~----- 105 (166)
T TIGR01664 43 LYPEIPAKLQELDDEG---YKIVIFTNQS-GIGRGKLSAESFKNKIEAFLEKLKVPIQVLAATH-----A---GL----- 105 (166)
T ss_pred ecCCHHHHHHHHHHCC---CEEEEEeCCc-ccccCcccHHHHHHHHHHHHHHcCCCEEEEEecC-----C---CC-----
Confidence 5689999999999999 9999999863 3 247788888886432222211 0 00
Q ss_pred CCCCchHHHHHHHHHHhC--CCCCccEEEEcCCc--------cchhhhhhcCcc
Q 008479 456 ESPIDKVQAFNNTLEKYG--TDRKNLSVYIGDSV--------GDLLCLLEADIG 499 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~--~~~~~~viyiGDs~--------~Dl~~l~~Ad~g 499 (564)
..--+...++...+..+ . ...+++||||+. +|+.+...|++.
T Consensus 106 -~~KP~p~~~~~~~~~~~~~~-~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 106 -YRKPMTGMWEYLQSQYNSPI-KMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred -CCCCccHHHHHHHHHcCCCC-CchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 11123456666666665 3 347899999996 699999999864
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00053 Score=68.04 Aligned_cols=58 Identities=22% Similarity=0.233 Sum_probs=48.4
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHHh
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQ 514 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~~ 514 (564)
..+.+|...++.+++..+.+ ...++++|||.||+.|+..+++||+++ +.+.+++.+..
T Consensus 155 ~~~~~K~~al~~l~~~~g~~-~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~ 213 (236)
T TIGR02471 155 PLRASKGLALRYLSYRWGLP-LEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQ 213 (236)
T ss_pred eCCCChHHHHHHHHHHhCCC-HHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcC
Confidence 35678999999999888763 468999999999999999999999997 44677777653
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.002 Score=59.67 Aligned_cols=106 Identities=15% Similarity=0.169 Sum_probs=67.0
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEcc---ccCHHHHHHHHhhc-----CCCceeEEeeceeecCccccccccccCCCC
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSY---CWCGDLIRASFSSA-----GLNALNVHANEFSFKESISTGEIIEKVESP 458 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~---g~s~~~I~~~l~~~-----g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g 458 (564)
..++|..++++.+.++| ..++=+|+ +. ....+.+|..+ +++.-.++.+.-..-. -++.+...+ ..-
T Consensus 27 ~~h~g~~~l~~~i~~~G---Y~ilYlTaRp~~q-a~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~-al~rEvi~~-~p~ 100 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNG---YKILYLTARPIGQ-ANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFS-ALHREVISK-DPE 100 (157)
T ss_pred hhhhcHHHHHHHHHHCC---eEEEEECcCcHHH-HHHHHHHHHHHHhCCccCCCCCEEECCcchhh-hhhcccccc-ChH
Confidence 35678888999999999 88888887 33 56677777766 5665566666311110 011122111 012
Q ss_pred CchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc
Q 008479 459 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 498 (564)
Q Consensus 459 ~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 498 (564)
.-|...|+.++.........-...+|...+|..+-..+++
T Consensus 101 ~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGi 140 (157)
T PF08235_consen 101 EFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGI 140 (157)
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCC
Confidence 3588899988875321111223359999999999999987
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0017 Score=61.47 Aligned_cols=110 Identities=6% Similarity=-0.016 Sum_probs=67.2
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce-eEEeeceeecCccccccccccCCCCCchH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL-NVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
..+.+.||+.++++.|+++| +++.|+|.+=....++.+|...++... .-+.+.-.| +.+.++. . .+..|.
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G---~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~F-d~iv~~~---~--~~~~kp 112 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAG---TYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLF-DDRIEIY---K--PNKAKQ 112 (174)
T ss_pred CEEEEcccHHHHHHHHHHCC---CEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhc-eeeeecc---C--CchHHH
Confidence 36789999999999999998 999999976226788888887775200 000000001 1111111 0 011121
Q ss_pred --HHHHHHHHHh--CCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 463 --QAFNNTLEKY--GTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 463 --~~l~~l~~~~--~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
..++.+.... +. .+.+++|||||..|+.+...|++.++..
T Consensus 113 ~~~i~~~~~~~~~~gl-~p~e~l~VgDs~~di~aA~~aGi~~i~v 156 (174)
T TIGR01685 113 LEMILQKVNKVDPSVL-KPAQILFFDDRTDNVREVWGYGVTSCYC 156 (174)
T ss_pred HHHHHHHhhhcccCCC-CHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence 1223222211 22 3578999999999999999999855444
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.00058 Score=68.68 Aligned_cols=49 Identities=29% Similarity=0.260 Sum_probs=41.7
Q ss_pred CCCchHHHHHHHHHHhCCC-CCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 457 SPIDKVQAFNNTLEKYGTD-RKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~-~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
.+..|...++.+++..+.+ ....++++|||.||++|+..|++||+|++.
T Consensus 173 ~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na 222 (256)
T TIGR01486 173 AGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP 222 (256)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence 4568999999998887653 147899999999999999999999999855
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0035 Score=59.08 Aligned_cols=94 Identities=12% Similarity=0.090 Sum_probs=67.3
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||+.++++.++++| .+++|+|.+-....++.+++..|+. .+ .+. .-.+...
T Consensus 41 ~~~~~pgv~e~L~~Lk~~g---~~l~I~Sn~~~~~~~~~~~~~~gl~---~~-----------~~~-------~KP~p~~ 96 (170)
T TIGR01668 41 HNEAYPALRDWIEELKAAG---RKLLIVSNNAGEQRAKAVEKALGIP---VL-----------PHA-------VKPPGCA 96 (170)
T ss_pred CCCcChhHHHHHHHHHHcC---CEEEEEeCCchHHHHHHHHHHcCCE---EE-----------cCC-------CCCChHH
Confidence 3578899999999999998 9999999873246677776665531 11 010 1123456
Q ss_pred HHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCc-cEEEc
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 503 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-giv~~ 503 (564)
+...++..+.. +.++++|||+. +|+.+...+++ .|.+.
T Consensus 97 ~~~~l~~~~~~-~~~~l~IGDs~~~Di~aA~~aGi~~i~v~ 136 (170)
T TIGR01668 97 FRRAHPEMGLT-SEQVAVVGDRLFTDVMGGNRNGSYTILVE 136 (170)
T ss_pred HHHHHHHcCCC-HHHEEEECCcchHHHHHHHHcCCeEEEEc
Confidence 66677666553 57899999998 79999999999 55553
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0008 Score=65.94 Aligned_cols=45 Identities=29% Similarity=0.271 Sum_probs=39.7
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEE
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
.+..|...++.+++..+.+ +.+++++|||.||++|+..|++||++
T Consensus 176 ~~~~Kg~al~~l~~~lgi~-~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 176 ASSSKGKAANWLKATYNQP-DVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CCCCHHHHHHHHHHHhCCC-CCcEEEECCCHHHHHHHHhCCceEEe
Confidence 4556999999999888764 57899999999999999999999886
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0017 Score=69.37 Aligned_cols=109 Identities=18% Similarity=0.245 Sum_probs=72.2
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHH
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 466 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 466 (564)
.+.||.+|-|..+|+-| ++.+.+++.- .--...+..+.|++ .|.. .++..+|...++
T Consensus 447 ivK~Gi~ERf~elR~Mg---IkTvM~TGDN-~~TAa~IA~EAGVD------------------dfiA-eatPEdK~~~I~ 503 (681)
T COG2216 447 IVKPGIKERFAELRKMG---IKTVMITGDN-PLTAAAIAAEAGVD------------------DFIA-EATPEDKLALIR 503 (681)
T ss_pred hcchhHHHHHHHHHhcC---CeEEEEeCCC-HHHHHHHHHHhCch------------------hhhh-cCChHHHHHHHH
Confidence 56778888888888777 7887777653 33233333444431 1221 256779999999
Q ss_pred HHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHHHHHhhCCceeecCchhH
Q 008479 467 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLV 527 (564)
Q Consensus 467 ~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~~~~~~gi~~~p~~~~~~ 527 (564)
+...+ +..+-+.|||.||-++|..||+|+++.....-+ ++- -+.+.+.++..
T Consensus 504 ~eQ~~-----grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAA---kEA-aNMVDLDS~PT 555 (681)
T COG2216 504 QEQAE-----GRLVAMTGDGTNDAPALAQADVGVAMNSGTQAA---KEA-ANMVDLDSNPT 555 (681)
T ss_pred HHHhc-----CcEEEEcCCCCCcchhhhhcchhhhhccccHHH---HHh-hcccccCCCcc
Confidence 87763 345668999999999999999999998664322 222 25566665443
|
|
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.016 Score=57.36 Aligned_cols=101 Identities=24% Similarity=0.327 Sum_probs=68.4
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCch--H
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK--V 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K--~ 462 (564)
...+-+|+.++++.+|+.| ..+.|+| |+ ++-.+.++...|+. ..||--+. .+.-|..| .
T Consensus 111 ~~~~~~~~~~~lq~lR~~g---~~l~iis-N~-d~r~~~~l~~~~l~--------~~fD~vv~------S~e~g~~KPDp 171 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKG---TILGIIS-NF-DDRLRLLLLPLGLS--------AYFDFVVE------SCEVGLEKPDP 171 (237)
T ss_pred CceeccHHHHHHHHHHhCC---eEEEEec-CC-cHHHHHHhhccCHH--------Hhhhhhhh------hhhhccCCCCh
Confidence 4567788889999999998 7888888 55 77788777766642 11221111 11223334 2
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCC-ccchhhhhhcCc-cEEEcCC
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVIGSS 505 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~-giv~~~~ 505 (564)
++++-.++..+. .+..+++|||+ .||+..++.+|. ++++.++
T Consensus 172 ~If~~al~~l~v-~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 172 RIFQLALERLGV-KPEECVHIGDLLENDYEGARNLGWHAILVDNS 215 (237)
T ss_pred HHHHHHHHHhCC-ChHHeEEecCccccccHhHHHcCCEEEEEccc
Confidence 555555665555 36899999997 588999999998 7777644
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.001 Score=66.82 Aligned_cols=56 Identities=21% Similarity=0.363 Sum_probs=45.9
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcC-ChhHHHHH
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG 512 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~-~~~L~~~~ 512 (564)
..+.+|...++.+++..+.+ ..+++++|||.||++|+..+++|+++++ .+.+++.|
T Consensus 184 ~~~~~K~~~i~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a 240 (256)
T TIGR00099 184 AKGVSKGSALQSLAEALGIS-LEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALA 240 (256)
T ss_pred CCCCChHHHHHHHHHHcCCC-HHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhC
Confidence 35678999999999887763 4789999999999999999999999973 34555444
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0034 Score=56.33 Aligned_cols=93 Identities=12% Similarity=-0.007 Sum_probs=63.6
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeE--EeeceeecCccccccccccCCCCCchHHH
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNV--HANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I--~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
.+.||+.++++.++++| +++.|+|.+....++..+++..+. ...+ +..-+ +.+.++. ...|.+.
T Consensus 29 ~~~~gv~e~L~~Lk~~g---~~l~i~Sn~~~~~~~~~~l~~~~~-~~~i~~l~~~f---~~~~~~~-------~~pkp~~ 94 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNG---FLLALASYNDDPHVAYELLKIFED-FGIIFPLAEYF---DPLTIGY-------WLPKSPR 94 (128)
T ss_pred HHHHHHHHHHHHHHHCC---eEEEEEeCCCCHHHHHHHHHhccc-cccchhhHhhh---hhhhhcC-------CCcHHHH
Confidence 67899999999999999 999999998558888888876541 0000 11111 1111111 1136777
Q ss_pred HHHHHHHhC--CCCCccEEEEcCCccchhhhh
Q 008479 465 FNNTLEKYG--TDRKNLSVYIGDSVGDLLCLL 494 (564)
Q Consensus 465 l~~l~~~~~--~~~~~~viyiGDs~~Dl~~l~ 494 (564)
+...++..+ . .+.+++||||+..|+....
T Consensus 95 ~~~a~~~lg~~~-~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 95 LVEIALKLNGVL-KPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred HHHHHHHhcCCC-CcceEEEECCCHhHHHHHH
Confidence 777777776 5 3589999999999987654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0016 Score=70.16 Aligned_cols=57 Identities=23% Similarity=0.223 Sum_probs=46.8
Q ss_pred CCCCchHHHHHHHHHHh---CCCCCccEEEEcCCccchhhhhhcC-ccEEEc-CChhHHHHHH
Q 008479 456 ESPIDKVQAFNNTLEKY---GTDRKNLSVYIGDSVGDLLCLLEAD-IGIVIG-SSSSLRRVGS 513 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~---~~~~~~~viyiGDs~~Dl~~l~~Ad-~giv~~-~~~~L~~~~~ 513 (564)
..+.+|...++.+++.. +.+ ..+++++|||.||++|+..++ +||+|+ +.+.+++.+.
T Consensus 171 p~g~sKg~Al~~L~~~~~~~gi~-~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~ 232 (413)
T PLN02382 171 PQGAGKGQALAYLLKKLKAEGKA-PVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYA 232 (413)
T ss_pred eCCCCHHHHHHHHHHHhhhcCCC-hhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHH
Confidence 35678999999999887 553 478999999999999999999 699998 4467776653
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0044 Score=74.75 Aligned_cols=112 Identities=19% Similarity=0.159 Sum_probs=73.3
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCC--ceeE---Eeec---------------------
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN--ALNV---HANE--------------------- 439 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~--~~~I---~aN~--------------------- 439 (564)
=++|||..+.++.|++.| +++.++||-- .+-...+..+.|+- +..+ -.+.
T Consensus 630 D~lq~~v~etI~~L~~AG---Ikv~mlTGD~-~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~ 705 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAG---IKIWVLTGDK-VETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEE 705 (1057)
T ss_pred hhhhhccHHHHHHHHHCC---CeEEEEcCCc-HHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHh
Confidence 389999999999999999 9999999863 56666666665541 1111 1110
Q ss_pred -----------eeecCcc----cccc----c----------cccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccch
Q 008479 440 -----------FSFKESI----STGE----I----------IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDL 490 (564)
Q Consensus 440 -----------l~~~~g~----~tG~----~----------~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl 490 (564)
+..++.. .... + ..--+++.+|.++++.+++.. +..+.++|||.||.
T Consensus 706 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~----~~~vl~iGDG~ND~ 781 (1057)
T TIGR01652 706 FNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKST----GKTTLAIGDGANDV 781 (1057)
T ss_pred hhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcC----CCeEEEEeCCCccH
Confidence 1111110 0000 0 001234578988888776531 35678999999999
Q ss_pred hhhhhcCccEEEcCC
Q 008479 491 LCLLEADIGIVIGSS 505 (564)
Q Consensus 491 ~~l~~Ad~giv~~~~ 505 (564)
+|++.|||||.+..+
T Consensus 782 ~mlk~AdVGIgi~g~ 796 (1057)
T TIGR01652 782 SMIQEADVGVGISGK 796 (1057)
T ss_pred HHHhhcCeeeEecCh
Confidence 999999999988544
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0014 Score=66.60 Aligned_cols=51 Identities=29% Similarity=0.310 Sum_probs=42.8
Q ss_pred CCCchHHHHHHHHHHhCCCCC-ccEEEEcCCccchhhhhhcCccEEEcC-ChhHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRK-NLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLR 509 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~-~~viyiGDs~~Dl~~l~~Ad~giv~~~-~~~L~ 509 (564)
.+ .|...++.+.+..+. .. ..+++||||.||++|+..|++|+++++ .+.++
T Consensus 188 ~~-~Kg~al~~l~~~~~i-~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k 240 (273)
T PRK00192 188 GG-DKGKAVRWLKELYRR-QDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNP 240 (273)
T ss_pred CC-CHHHHHHHHHHHHhc-cCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCc
Confidence 45 799999999887776 36 899999999999999999999999984 34444
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0041 Score=75.15 Aligned_cols=46 Identities=22% Similarity=0.401 Sum_probs=35.6
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
+++..|.++++.+++.. +..+.+||||.||.+|++.|||||.+..+
T Consensus 854 ~sP~QKa~IV~~vk~~~----~~vtlaIGDGaNDv~mIq~AdVGIGIsG~ 899 (1178)
T PLN03190 854 VAPLQKAGIVALVKNRT----SDMTLAIGDGANDVSMIQMADVGVGISGQ 899 (1178)
T ss_pred CCHHHHHHHHHHHHhcC----CcEEEEECCCcchHHHHHhcCeeeeecCc
Confidence 34568888887666531 24578999999999999999999987544
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0032 Score=63.13 Aligned_cols=75 Identities=27% Similarity=0.363 Sum_probs=50.0
Q ss_pred HHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 420 LIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 420 ~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
-|+..|+..|+...-|++|. +...-++.+.+|..+++-++...+.+ ..+++.+|||-||++||..+..|
T Consensus 135 ~i~~~l~~~~l~~~~i~s~~----------~~ldilP~~a~K~~Al~~L~~~~~~~-~~~vl~aGDSgND~~mL~~~~~~ 203 (247)
T PF05116_consen 135 EIRARLRQRGLRVNVIYSNG----------RDLDILPKGASKGAALRYLMERWGIP-PEQVLVAGDSGNDLEMLEGGDHG 203 (247)
T ss_dssp HHHHHHHCCTCEEEEEECTC----------CEEEEEETT-SHHHHHHHHHHHHT---GGGEEEEESSGGGHHHHCCSSEE
T ss_pred HHHHHHHHcCCCeeEEEccc----------eeEEEccCCCCHHHHHHHHHHHhCCC-HHHEEEEeCCCCcHHHHcCcCCE
Confidence 46666777775322233332 11111234556999999999988763 47899999999999999888889
Q ss_pred EEEcCC
Q 008479 500 IVIGSS 505 (564)
Q Consensus 500 iv~~~~ 505 (564)
|++++.
T Consensus 204 vvV~Na 209 (247)
T PF05116_consen 204 VVVGNA 209 (247)
T ss_dssp EE-TTS
T ss_pred EEEcCC
Confidence 999844
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0016 Score=64.35 Aligned_cols=47 Identities=28% Similarity=0.333 Sum_probs=39.4
Q ss_pred CCCchHHHHHHHHHHhCCC-CCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 457 SPIDKVQAFNNTLEKYGTD-RKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~-~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
.+.+|...++.++...+.. ....++++|||.||++|++.||+||+++
T Consensus 178 ~~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v~ 225 (225)
T TIGR02461 178 GGSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLVG 225 (225)
T ss_pred CCCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEecC
Confidence 3778999999988776542 2357999999999999999999999885
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0067 Score=60.74 Aligned_cols=56 Identities=20% Similarity=0.207 Sum_probs=45.7
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhh-cCccEEEc-CChhHHHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE-ADIGIVIG-SSSSLRRVGS 513 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~-Ad~giv~~-~~~~L~~~~~ 513 (564)
.+.+|...++.+++..+.+ ..+++++|||.||+.|+.. ++.||+++ +.+.+++.+.
T Consensus 164 ~~~~K~~al~~l~~~~~i~-~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~ 221 (249)
T TIGR01485 164 QGSGKGQALQYLLQKLAME-PSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYD 221 (249)
T ss_pred CCCChHHHHHHHHHHcCCC-ccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHH
Confidence 5668999999999887763 5789999999999999998 66799997 4456776654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >cd00232 HemeO Heme oxygenase catalyzes the rate limiting step in the degradation of heme to bilirubin, it is essential for recycling of iron from heme | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.33 Score=46.85 Aligned_cols=187 Identities=16% Similarity=0.050 Sum_probs=109.9
Q ss_pred hHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHH
Q 008479 15 GLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECAD----DDDAKLSISELRKG 90 (564)
Q Consensus 15 ~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~----~~~~~~~l~~~~~~ 90 (564)
+|+.+|-......-...=+|||++.|..|+++.+.++.||.+-+.+....-+.+........ ..+...... .
T Consensus 1 ~~~~~Lr~~T~~~H~~~e~~~~~~~l~~~~~s~~~Y~~~L~~~~~~~~~lE~~l~~~~~~~~~~~~~~~~~~r~~----~ 76 (203)
T cd00232 1 SLSEELRAATRQLHEEAENLVFMKDLLKGFLSREGYARFLANLYLVYRALEALLEASKDNPYLAPLYLPELERAA----A 76 (203)
T ss_pred CHHHHHHHHHHHHHHHHHchHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccCccccchH----H
Confidence 35666666555444445579999999999999999999999999999888887776543211 111111110 1
Q ss_pred HHHHHHHHHHHHHHhCCCcc-cccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHH--
Q 008479 91 VLEELKMHDSFVKEWGTDLA-KMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY-- 167 (564)
Q Consensus 91 i~~E~~~h~~~~~~~gi~~~-~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y-- 167 (564)
+..- ++.+|.+.. ....|.+++ .|.+++...+..+ ++.++++++.-+-.=
T Consensus 77 L~~D-------L~~lg~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------------------~~~~lg~~YV~egs~l~ 129 (203)
T cd00232 77 LEKD-------LAYLGGSDWRVREPPLPAA-AYAARLREIAEEN-------------------PALLLGHAYVRYGADLS 129 (203)
T ss_pred HHHH-------HHHHhCCCccccCCCChHH-HHHHHHHHHHhcC-------------------HHHHHHHHHHHHHHHhc
Confidence 1111 234555543 234456677 9999888776543 245667666655321
Q ss_pred --HHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Q 008479 168 --AFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEV 237 (564)
Q Consensus 168 --~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~ 237 (564)
..|.+.+.+..+. + ..=-.+...|..++-...-..+.+.+|.+ ..++++.+++.+-=..+-++=.
T Consensus 130 GG~~i~~~l~~~~~~--~-~~~~~f~~~~g~~~~~~~w~~f~~~l~~~--~~~~~~~~~~i~~A~~~F~~~~ 196 (203)
T cd00232 130 GGQVLAKIAQRALLL--E-GKGLAFYAFHGIADRGLFKREFREALDAL--PLDEEERQRVVAEARAAFRLNG 196 (203)
T ss_pred ccHHHHHHHHHHhCC--C-CccCccccCCCcCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 2233334433221 1 12233555665345666677788888886 3577777776655555544433
|
Heme is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. This family includes bacterial HO, as well as the mammalian isoforms HO-1, and HO-2. Heme oxygenases play key roles in heme homeostasis, oxidative stress response, photosynthetic pigment formation in cyanobacteria, cellular signaling in mammals, and iron acquisition from host heme by bacterial pathogens. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0061 Score=62.68 Aligned_cols=106 Identities=4% Similarity=-0.160 Sum_probs=66.8
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc---eeEEeeceeecCccccccccccCCCCCchH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA---LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
..+.||+.++++.++++| ++++|+|+.- ....+.+++.+++.. ..|++-. .+..+......+-.+.
T Consensus 186 ~~~~~~~~~~l~~l~~~g---~~i~i~T~r~-~~~~~~~l~~l~~~~~~f~~i~~~~-------~~~~~~~~~~~~kp~p 254 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAG---YEIIVVSGRD-GVCEEDTVEWLRQTDIWFDDLIGRP-------PDMHFQREQGDKRPDD 254 (300)
T ss_pred CCCChhHHHHHHHHHhCC---CEEEEEeCCC-hhhHHHHHHHHHHcCCchhhhhCCc-------chhhhcccCCCCCCcH
Confidence 467899999999999998 9999999985 788888887765421 0111111 0000111111111223
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
..+...+...+...+..++||||+.+|+.+...+++.++-
T Consensus 255 ~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~ 294 (300)
T PHA02530 255 VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQ 294 (300)
T ss_pred HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEE
Confidence 3444444433332347899999999999999999986443
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0062 Score=55.70 Aligned_cols=95 Identities=21% Similarity=0.369 Sum_probs=68.7
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHH
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 466 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 466 (564)
..|+|+ =++.+.+.| +.+.|+|+-= ..+++.-++..|+..+ +.| ..+|...++
T Consensus 37 nv~DG~--Gik~l~~~G---i~vAIITGr~-s~ive~Ra~~LGI~~~-------------~qG--------~~dK~~a~~ 89 (170)
T COG1778 37 NVRDGH--GIKLLLKSG---IKVAIITGRD-SPIVEKRAKDLGIKHL-------------YQG--------ISDKLAAFE 89 (170)
T ss_pred eccCcH--HHHHHHHcC---CeEEEEeCCC-CHHHHHHHHHcCCcee-------------eec--------hHhHHHHHH
Confidence 345553 123344456 9999999875 5778888888886321 233 236999999
Q ss_pred HHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC-hhHH
Q 008479 467 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLR 509 (564)
Q Consensus 467 ~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~-~~L~ 509 (564)
+++.+.+.. ++++.||||-.+|++++..+++++...+. +-++
T Consensus 90 ~L~~~~~l~-~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~ 132 (170)
T COG1778 90 ELLKKLNLD-PEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLK 132 (170)
T ss_pred HHHHHhCCC-HHHhhhhcCccccHHHHHHcCCcccccccCHHHH
Confidence 999998874 68999999999999999999987776533 3444
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.025 Score=54.24 Aligned_cols=29 Identities=10% Similarity=0.185 Sum_probs=20.6
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccc
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYC 415 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g 415 (564)
.+++.-||+.|.++.+.+.| ...++|++.
T Consensus 70 ~~l~p~~gA~e~l~~L~~~g---~~~~~Itar 98 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLRDKG---HEIVIITAR 98 (191)
T ss_dssp TT--B-TTHHHHHHHHHTST---TEEEEEEE-
T ss_pred cCCCccHHHHHHHHHHHHcC---CcEEEEEec
Confidence 45788899999999999887 667777654
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.013 Score=66.36 Aligned_cols=125 Identities=20% Similarity=0.197 Sum_probs=79.8
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCC--ceeEEeec-eeecC---c---cccccccc-cC
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN--ALNVHANE-FSFKE---S---ISTGEIIE-KV 455 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~--~~~I~aN~-l~~~~---g---~~tG~~~~-~~ 455 (564)
=+.|||.++-++.|++.| +.+-.|++.- -.-.+++..+.|+- .....|=+ -+|.+ . ..-+++.- --
T Consensus 646 DPvRPgV~~AV~~Cq~AG---ItVRMVTGDN-I~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlAR 721 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAG---ITVRMVTGDN-INTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLAR 721 (1034)
T ss_pred CCCCCCcHHHHHHHHHcC---cEEEEEeCCc-HHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeec
Confidence 489999999999999999 9999999864 55667777777751 11101100 01110 0 00111110 02
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEE-EEcCCccchhhhhhcCccEEEc-CChhHHHHHHhhCCceeecCc
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSV-YIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLYP 524 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~vi-yiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~~~gi~~~p~~~ 524 (564)
.++.||...++.+++. .+++ .-|||.||-++|+.||||+++| +....+ ++.. .++-+++
T Consensus 722 SSP~DK~lLVk~L~~~------g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVA---KEaS-DIIi~DD 782 (1034)
T KOG0204|consen 722 SSPNDKHLLVKGLIKQ------GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVA---KEAS-DIIILDD 782 (1034)
T ss_pred CCCchHHHHHHHHHhc------CcEEEEecCCCCCchhhhhcccchhccccchhhh---hhhC-CeEEEcC
Confidence 3568999988888852 3455 6899999999999999999998 444332 3332 4555544
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.0052 Score=59.32 Aligned_cols=46 Identities=20% Similarity=0.260 Sum_probs=39.5
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEE
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
..+.+|...++.+++..+.+ ...++++|||.||+.|+..++++|++
T Consensus 159 p~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 159 PAGVDKGSALQALLKELNGK-RDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred cCCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 35778999999999887653 47899999999999999999998875
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.08 Score=53.25 Aligned_cols=113 Identities=12% Similarity=0.108 Sum_probs=73.1
Q ss_pred HHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhh---cCCCceeE-Eeeceee-----cCccccc
Q 008479 379 IKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS---AGLNALNV-HANEFSF-----KESISTG 449 (564)
Q Consensus 379 i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~---~g~~~~~I-~aN~l~~-----~~g~~tG 449 (564)
+.+......+.+.+.++++.++.+| ++++.+|..+ ..+....+++ .|++...- +.++..+ .+.....
T Consensus 73 i~~~~~~~lie~~~~~~i~~lq~~~---~~v~alT~~~-~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~ 148 (252)
T PF11019_consen 73 IFELRKMELIESDVPNIINSLQNKG---IPVIALTARG-PNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRA 148 (252)
T ss_pred HHhhcceEEcchhHHHHHHHHHHCC---CcEEEEcCCC-hhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCC
Confidence 4445556678889999999999998 9999999986 6667666544 45432111 1111111 1100000
Q ss_pred c-c-ccc-CCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhc
Q 008479 450 E-I-IEK-VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 496 (564)
Q Consensus 450 ~-~-~~~-~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~A 496 (564)
. + .|- .++|.+|...|..++...+. .++++|||-|+.-.+..+..|
T Consensus 149 ~~~~~GIlft~~~~KG~~L~~fL~~~~~-~pk~IIfIDD~~~nl~sv~~a 197 (252)
T PF11019_consen 149 PSFYDGILFTGGQDKGEVLKYFLDKINQ-SPKKIIFIDDNKENLKSVEKA 197 (252)
T ss_pred ceeecCeEEeCCCccHHHHHHHHHHcCC-CCCeEEEEeCCHHHHHHHHHH
Confidence 0 0 011 34678999999999988765 468999999999888766553
|
The function is not known. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.052 Score=51.53 Aligned_cols=104 Identities=16% Similarity=0.202 Sum_probs=67.9
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEcc--cc-C-----------HHHHHHHHhhcCCCceeEEeeceeecCccccccc
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSY--CW-C-----------GDLIRASFSSAGLNALNVHANEFSFKESISTGEI 451 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~--g~-s-----------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~ 451 (564)
..+.||..+-+..+++.| ..++|||. |. . ...+...|++.|.....|+ +.+..
T Consensus 30 ~~~~~g~i~al~~l~~~g---y~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~----------~Cph~ 96 (181)
T COG0241 30 FQFIPGVIPALLKLQRAG---YKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGIL----------YCPHH 96 (181)
T ss_pred hccCccHHHHHHHHHhCC---CeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEE----------ECCCC
Confidence 578899999999999888 99999996 11 0 1224444555553212211 11111
Q ss_pred c-ccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEc
Q 008479 452 I-EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 503 (564)
Q Consensus 452 ~-~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~ 503 (564)
. ..+.|---|.-.+.+++++++.+ ..++++|||..+|+.+...+++ |+.+.
T Consensus 97 p~~~c~cRKP~~gm~~~~~~~~~iD-~~~s~~VGD~~~Dlq~a~n~gi~~~~~~ 149 (181)
T COG0241 97 PEDNCDCRKPKPGMLLSALKEYNID-LSRSYVVGDRLTDLQAAENAGIKGVLVL 149 (181)
T ss_pred CCCCCcccCCChHHHHHHHHHhCCC-ccceEEecCcHHHHHHHHHCCCCceEEE
Confidence 1 11333344667888888887764 4789999999999999999998 55543
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.0086 Score=67.39 Aligned_cols=48 Identities=23% Similarity=0.137 Sum_probs=40.5
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEE--cCCccchhhhhhcCccEEEcCC
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYI--GDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyi--GDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
.+.+|...++.+++..+... ..++.+ |||.||+.||..||+||+++..
T Consensus 610 ~gvdKG~AL~~L~e~~gI~~-~eViafalGDs~NDisMLe~Ag~gVAM~~~ 659 (694)
T PRK14502 610 GGNDKGKAIKILNELFRLNF-GNIHTFGLGDSENDYSMLETVDSPILVQRP 659 (694)
T ss_pred CCCCHHHHHHHHHHHhCCCc-cceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence 47799999999998876543 556666 9999999999999999999744
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.0084 Score=60.83 Aligned_cols=49 Identities=16% Similarity=0.274 Sum_probs=41.9
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhc----CccEEEcCCh
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA----DIGIVIGSSS 506 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~A----d~giv~~~~~ 506 (564)
.+.+|...++++++..+.. ...++|+||+.||..|+..+ ++||.++...
T Consensus 171 ~g~~Kg~al~~ll~~~~~~-~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~ 223 (266)
T PRK10187 171 RGTNKGEAIAAFMQEAPFA-GRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA 223 (266)
T ss_pred CCCCHHHHHHHHHHhcCCC-CCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC
Confidence 4678999999999987653 46899999999999999999 8899998553
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.063 Score=55.94 Aligned_cols=104 Identities=11% Similarity=-0.016 Sum_probs=72.9
Q ss_pred CCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhh----cCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS----AGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 388 lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~----~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
+.+|+.++++.++++| +.+.|+|.+- ...+..+|++ .++. ..+.. + ......|..
T Consensus 32 ~~~~~~e~L~~L~~~G---i~lai~S~n~-~~~a~~~l~~~~~~~~~~------~~f~~---~--------~~~~~pk~~ 90 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQG---FLLALASKND-EDDAKKVFERRKDFILQA------EDFDA---R--------SINWGPKSE 90 (320)
T ss_pred cHHHHHHHHHHHHhCC---CEEEEEcCCC-HHHHHHHHHhCccccCcH------HHeeE---E--------EEecCchHH
Confidence 3789999999999999 9999999996 7889999987 3321 11111 0 001125888
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHH
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGS 513 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~ 513 (564)
.+++++++.+.+ .+.++||||+..|+.....+...+-+. ....+.+.+.
T Consensus 91 ~i~~~~~~l~i~-~~~~vfidD~~~d~~~~~~~lp~~~~~~~~~~~~~~l~ 140 (320)
T TIGR01686 91 SLRKIAKKLNLG-TDSFLFIDDNPAERANVKITLPVKTLLCDPAELAAILL 140 (320)
T ss_pred HHHHHHHHhCCC-cCcEEEECCCHHHHHHHHHHCCCCccCCChHHHHHHhc
Confidence 899988887763 578999999999999998876443332 2334444443
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.066 Score=53.08 Aligned_cols=91 Identities=12% Similarity=0.126 Sum_probs=54.4
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
+.-||..+|++.++++| +.+++||+=- ....-..-|.+.|+... +.+.+... +... ......-|..+
T Consensus 115 ~aip~a~~l~~~~~~~G---~~V~~iT~R~~~~r~~T~~nL~~~G~~~~----~~l~lr~~---~~~~-~~~~~~yK~~~ 183 (229)
T PF03767_consen 115 PAIPGALELYNYARSRG---VKVFFITGRPESQREATEKNLKKAGFPGW----DHLILRPD---KDPS-KKSAVEYKSER 183 (229)
T ss_dssp EEETTHHHHHHHHHHTT---EEEEEEEEEETTCHHHHHHHHHHHTTSTB----SCGEEEEE---SSTS-S------SHHH
T ss_pred cccHHHHHHHHHHHHCC---CeEEEEecCCchhHHHHHHHHHHcCCCcc----chhccccc---cccc-cccccccchHH
Confidence 66788999999999999 9999999732 14445555666675321 12222110 0000 11123348877
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhh
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLC 492 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~ 492 (564)
.+.+.++ ++.-+.+|||..+|+.-
T Consensus 184 r~~i~~~----Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 184 RKEIEKK----GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp HHHHHHT----TEEEEEEEESSGGGCHC
T ss_pred HHHHHHc----CCcEEEEeCCCHHHhhc
Confidence 7777663 12345589999999988
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.02 Score=57.35 Aligned_cols=55 Identities=13% Similarity=0.164 Sum_probs=42.4
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcC----CccchhhhhhcCc-cEEEc-CChhHHHHHHhh
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIG-SSSSLRRVGSQF 515 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad~-giv~~-~~~~L~~~~~~~ 515 (564)
..|.+|...|+.+.+. .++++++|| |.||++|+..|.. |+.++ +.+.++.+|+-+
T Consensus 184 ~~gvsKg~al~~L~~~-----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~ 244 (247)
T PTZ00174 184 PKGWDKTYCLRHLEND-----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELF 244 (247)
T ss_pred eCCCcHHHHHHHHHhh-----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHh
Confidence 4567899999999876 368999999 8999999997643 66666 456777666543
|
|
| >PF12981 DUF3865: Domain of Unknown Function with PDB structure (DUF3865); InterPro: IPR024477 This entry represents a family of proteins of unknown function | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.19 Score=48.32 Aligned_cols=202 Identities=15% Similarity=0.121 Sum_probs=107.2
Q ss_pred HHHHHHHHhHHhH-HHh-hcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 008479 16 LARRLWIKFKRES-VFA-MYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLE 93 (564)
Q Consensus 16 ~~~~lw~~~~~~~-~~~-~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i~~ 93 (564)
|+..+.+....+. .++ .++||++.|.+-++.. ...||.|=..|-++-.-.+..|+.++...-.=.+..++..++.+
T Consensus 4 ~s~~~~~~l~~d~~~fs~nn~~~~~~i~t~S~~~--~~~vi~~ys~F~~~~~~~l~~A~~~~~~~~~~~V~~El~~Ni~E 81 (231)
T PF12981_consen 4 FSTQLNQWLTMDHYQFSINNNPFLSHISTASFSQ--KELVIKQYSVFPKYNCGMLQRAAYCIRGFCWPGVAQELQRNINE 81 (231)
T ss_dssp HHHHHHHHHHHH-GGG-TTT-CCHHGCCC--HHH--HHHHHHHHCHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHhhhhhcCCHHHHHhhhhhHHH--HHHHHHHHhHhhHHHHHHHHHHHHHHhhcCCcHHHHHHHHhHHH
Confidence 4455554443332 233 6899999887766554 44555554446666555555555554322222355667778888
Q ss_pred HHH----------HHHHHHHH-hCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHH
Q 008479 94 ELK----------MHDSFVKE-WGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSP 162 (564)
Q Consensus 94 E~~----------~h~~~~~~-~gi~~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~p 162 (564)
|.. ++..-+.. +|.+.. ...|+++|+...+=+.....-+. -++++|++.
T Consensus 82 E~G~~~gk~sHy~~~~~~l~~~~~~~v~-~~~Ps~aT~~fl~sv~~L~t~~~-------------------s~vlGa~YA 141 (231)
T PF12981_consen 82 EMGEGCGKISHYVVFRKALHTYFGFDVN-NRMPSVATTHFLDSVLALFTWDS-------------------SEVLGACYA 141 (231)
T ss_dssp HTTTTTTT--HHHHHHHHHHHHHS---T-T----HHHHHHHHHHHHHCTS-H-------------------HHHHHHHHH
T ss_pred hcCCCCCCcchHHHHHHHHHHHhCCccc-ccCCcHHHHHHHHHHHHHhCCCH-------------------HHHHHHHHH
Confidence 876 55554444 887665 46799999999888888764322 255666655
Q ss_pred HH-------HHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 008479 163 CM-------RLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKL 235 (564)
Q Consensus 163 C~-------~~Y~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~l 235 (564)
-+ -+-.+|..+++...+..-+...- ++.+.+-++-=.+..+.+.+.++.... +++++...++=|..++..
T Consensus 142 tE~~AIpEl~ll~ei~~~la~rk~~~~~~s~l-~F~d~HlDg~E~~H~d~L~~~l~~~i~--~e~q~~~f~~Gf~~mI~~ 218 (231)
T PF12981_consen 142 TEAAAIPELQLLYEIVNELAQRKGLHNSWSQL-DFYDWHLDGTEQEHKDGLRQFLASYID--TEEQMPLFKDGFLAMIDI 218 (231)
T ss_dssp HHHHHHHHHHHHHHHHTTT---HHHHH-------HHHHHCS----HHHHHHHHHHHTT----GGG-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCcchhhh-HHHHHhcchHHHHHHHHHHHHHHHHcC--cchhHHHHHHHHHHHHHH
Confidence 44 22333333333211100011111 344445556667888899999998753 344688889999999999
Q ss_pred HHHhhcc
Q 008479 236 EVEFFCA 242 (564)
Q Consensus 236 E~~Fw~~ 242 (564)
=..||.+
T Consensus 219 m~~wW~~ 225 (231)
T PF12981_consen 219 MEDWWKE 225 (231)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8899975
|
The Nostoc punctiforme protein (D0VWS1 from SWISSPROT) has been structurally characterised and adopts a heme oxygenase-like fold similar to that of the Chlamydia trachomatis death domain-binding CADD protein. The proposed active sites of the Nostoc and Chlamydia sequences are identical, suggesting similar functions.; PDB: 3B5P_A 3B5O_A. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.046 Score=60.62 Aligned_cols=99 Identities=14% Similarity=0.124 Sum_probs=61.3
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHH-HHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD-LIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~-~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
+.=|.++..-++.++.++ .-..|++|. |-. .|+..-.+. +++.|- .+ .+.+--|++..|.++
T Consensus 710 v~sr~dah~eL~~lR~k~---~~aLvi~G~-Sl~~cl~yye~Ef----~el~~~--------~~-aVv~CRctPtQKA~v 772 (1051)
T KOG0210|consen 710 VTSRGDAHNELNNLRRKT---DCALVIDGE-SLEFCLKYYEDEF----IELVCE--------LP-AVVCCRCTPTQKAQV 772 (1051)
T ss_pred cCCchHHHHHHHHhhcCC---CcEEEEcCc-hHHHHHHHHHHHH----HHHHHh--------cC-cEEEEecChhHHHHH
Confidence 455677777777887765 567777763 222 222111110 111110 00 111113677889999
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
.+-+.+.. +.++.+||||-||..|+..||+||-+-++
T Consensus 773 ~~llq~~t----~krvc~IGDGGNDVsMIq~A~~GiGI~gk 809 (1051)
T KOG0210|consen 773 VRLLQKKT----GKRVCAIGDGGNDVSMIQAADVGIGIVGK 809 (1051)
T ss_pred HHHHHHhh----CceEEEEcCCCccchheeecccceeeecc
Confidence 88777654 36899999999999999999998877544
|
|
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.99 Score=44.44 Aligned_cols=107 Identities=10% Similarity=0.057 Sum_probs=65.1
Q ss_pred HhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcC-C-Cc-eeEEe-eceeecCccccccccccCCC
Q 008479 382 AGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAG-L-NA-LNVHA-NEFSFKESISTGEIIEKVES 457 (564)
Q Consensus 382 ~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g-~-~~-~~I~a-N~l~~~~g~~tG~~~~~~~~ 457 (564)
......+.||..++++.++.+| +|+.+.|..- ..-.+..++.++ + .. .++++ ..-++ ..
T Consensus 87 ~~~~~~~~PGa~kLv~~L~~~g---ip~alat~s~-~~~~~~k~~~~~~~~~~f~~~v~~d~~~v-------------~~ 149 (222)
T KOG2914|consen 87 LFMNSILMPGAEKLVNHLKNNG---IPVALATSST-SASFELKISRHEDIFKNFSHVVLGDDPEV-------------KN 149 (222)
T ss_pred hccccccCCcHHHHHHHHHhCC---CCeeEEecCC-cccHHHHHHHhhHHHHhcCCCeecCCccc-------------cC
Confidence 3447889999999999999999 9999999874 344444444443 1 00 01111 11111 11
Q ss_pred CCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 458 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 458 g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
|-.....+-.-.+..+...+++++.+.||.+=+.+.+.|+.-+++-++
T Consensus 150 gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 150 GKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred CCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 111212222222333332237899999999999999999987666555
|
|
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.98 Score=43.90 Aligned_cols=113 Identities=11% Similarity=0.180 Sum_probs=75.3
Q ss_pred CHHHHHHHhh------cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeeceeecCcc
Q 008479 375 NLEDIKKAGE------RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESI 446 (564)
Q Consensus 375 ~~~~i~~~~~------~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~ 446 (564)
+.++..+++. .+..++-.++++-.++.++ ..|++.+. ..=...+|...|+... .|+|
T Consensus 82 d~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~-----k~~FTNa~-k~HA~r~Lk~LGieDcFegii~--------- 146 (244)
T KOG3109|consen 82 DADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRR-----KWIFTNAY-KVHAIRILKKLGIEDCFEGIIC--------- 146 (244)
T ss_pred CHHHHHHHhhccCcHhhcCCCHHHHHHHHhCcccc-----EEEecCCc-HHHHHHHHHHhChHHhccceeE---------
Confidence 4677777654 4455555789998888653 78999887 6666667888886321 2222
Q ss_pred ccccccccCCCCCchH--HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEc
Q 008479 447 STGEIIEKVESPIDKV--QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 503 (564)
Q Consensus 447 ~tG~~~~~~~~g~~K~--~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~ 503 (564)
.+...+.-.+-.||. ..++......+++++.+++++-||.+-+...+..|. +++++
T Consensus 147 -~e~~np~~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~ 205 (244)
T KOG3109|consen 147 -FETLNPIEKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVG 205 (244)
T ss_pred -eeccCCCCCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEE
Confidence 222221112223453 566777777777778999999999999999999998 45555
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.17 Score=50.40 Aligned_cols=87 Identities=17% Similarity=0.261 Sum_probs=56.5
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHH--HHHhhcCCCc---eeEEeeceeecCccccccccccCCCCC
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIR--ASFSSAGLNA---LNVHANEFSFKESISTGEIIEKVESPI 459 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~--~~l~~~g~~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~ 459 (564)
...+.||+.+++++++++| ++++|+|.+- ....+ ..|++.|++. ..|+++. .
T Consensus 22 ~~~~~pga~e~L~~L~~~G---~~~~ivTN~~-~~~~~~~~~L~~~gl~~~~~~~Ii~s~----------~--------- 78 (242)
T TIGR01459 22 GNHTYPGAVQNLNKIIAQG---KPVYFVSNSP-RNIFSLHKTLKSLGINADLPEMIISSG----------E--------- 78 (242)
T ss_pred CCccCccHHHHHHHHHHCC---CEEEEEeCCC-CChHHHHHHHHHCCCCccccceEEccH----------H---------
Confidence 3567899999999999999 9999999874 55544 6778777642 1122211 0
Q ss_pred chHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhh
Q 008479 460 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE 495 (564)
Q Consensus 460 ~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~ 495 (564)
.-...+....++.+. .+..++++||+..|+..+..
T Consensus 79 ~~~~~l~~~~~~~~~-~~~~~~~vGd~~~d~~~~~~ 113 (242)
T TIGR01459 79 IAVQMILESKKRFDI-RNGIIYLLGHLENDIINLMQ 113 (242)
T ss_pred HHHHHHHhhhhhccC-CCceEEEeCCcccchhhhcC
Confidence 011344444433322 23679999999999877644
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.22 Score=55.25 Aligned_cols=116 Identities=12% Similarity=0.068 Sum_probs=72.3
Q ss_pred CCccHHHHHHHHHHcCCCCCcEEEEccccC-----------HHHHHHHHhhcCCCceeEEeeceeecCccccccccccCC
Q 008479 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWC-----------GDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVE 456 (564)
Q Consensus 388 lr~G~~efl~~l~~~g~~~~~~~IvS~g~s-----------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~ 456 (564)
+.||+.+.|+.++++| +.++|+|.--. ...+..+++++|++..-++|-+ + +.
T Consensus 198 l~pgV~e~L~~L~~~G---y~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgipfdviia~~----~----~~------ 260 (526)
T TIGR01663 198 IFPEIPEKLKELEADG---FKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVPFQVFIAIG----A----GF------ 260 (526)
T ss_pred cccCHHHHHHHHHHCC---CEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCceEEEEeCC----C----CC------
Confidence 5689999999999999 99999997320 1357888888887533233321 0 00
Q ss_pred CCCchHHHHHHHHHHhC----CCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHHhhCCceeecC
Q 008479 457 SPIDKVQAFNNTLEKYG----TDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLY 523 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~----~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~~~gi~~~p~~ 523 (564)
+.--+...+..++...+ . ...+++||||+.+|+.+...|+.. -. -+.+=+.+|..-||+|..-.
T Consensus 261 ~RKP~pGm~~~a~~~~~~~~~I-d~~~S~~VGDaagr~~~g~~ag~~--~~D~s~~D~~FA~n~gi~F~tPe 329 (526)
T TIGR01663 261 YRKPLTGMWDHLKEEANDGTEI-QEDDCFFVGDAAGRPANGKAAGKK--KKDFSCADRLFAANLGIPFATPE 329 (526)
T ss_pred CCCCCHHHHHHHHHhcCcccCC-CHHHeEEeCCcccchHHHHhcCCC--cCCCChhhHHHHHHcCCcccChH
Confidence 11112344555555442 2 247899999999999887766520 00 01233567788888887443
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.57 Score=46.30 Aligned_cols=90 Identities=17% Similarity=0.217 Sum_probs=56.7
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCC-Cch
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESP-IDK 461 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g-~~K 461 (564)
..+.-||..+|++.++++| +.++++|+=. ........|.+.|++.. .+|...+. +. ...+. .-|
T Consensus 118 ~apaip~al~l~~~l~~~G---~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~----~~LiLR~~---~d---~~~~~~~yK 184 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELG---IKIFLLSGRWEELRNATLDNLINAGFTGW----KHLILRGL---ED---SNKTVVTYK 184 (229)
T ss_pred CCCCCHHHHHHHHHHHHCC---CEEEEEcCCChHHHHHHHHHHHHcCCCCc----CeeeecCC---CC---CCchHhHHH
Confidence 4578899999999999999 9999999853 12336667777776421 22333210 00 00011 127
Q ss_pred HHHHHHHHHHhCCCCCccEE-EEcCCccchhh
Q 008479 462 VQAFNNTLEKYGTDRKNLSV-YIGDSVGDLLC 492 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~vi-yiGDs~~Dl~~ 492 (564)
..+.+++.++ +.+|+ .|||-.+|+.-
T Consensus 185 s~~R~~l~~~-----GYrIv~~iGDq~sDl~G 211 (229)
T TIGR01675 185 SEVRKSLMEE-----GYRIWGNIGDQWSDLLG 211 (229)
T ss_pred HHHHHHHHhC-----CceEEEEECCChHHhcC
Confidence 7776666652 34555 79999999954
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.021 Score=53.38 Aligned_cols=94 Identities=11% Similarity=0.073 Sum_probs=58.4
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
-+..|||+.+|++.+.++ .+++|.|++- ..+++.++...+... .++...+--++...+. .+ .
T Consensus 40 ~v~~RPgl~eFL~~l~~~----yei~I~Ts~~-~~yA~~il~~ldp~~-~~f~~~l~r~~~~~~~----------~~--~ 101 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW----YELVIFTASL-EEYADPVLDILDRGG-KVISRRLYRESCVFTN----------GK--Y 101 (162)
T ss_pred EEEECCCHHHHHHHHHhc----CEEEEEcCCc-HHHHHHHHHHHCcCC-CEEeEEEEccccEEeC----------CC--E
Confidence 478999999999999864 7899999995 999999998866421 1222221111111100 01 1
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 498 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 498 (564)
++.+. ..+. ...++|+|||+..|..+-..+++
T Consensus 102 ~K~L~-~l~~-~~~~vIiVDD~~~~~~~~~~NgI 133 (162)
T TIGR02251 102 VKDLS-LVGK-DLSKVIIIDNSPYSYSLQPDNAI 133 (162)
T ss_pred EeEch-hcCC-ChhhEEEEeCChhhhccCccCEe
Confidence 11111 1111 23689999999998876666654
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.24 Score=48.76 Aligned_cols=114 Identities=16% Similarity=0.182 Sum_probs=70.0
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHH-HH---HHHhhcCCCceeEEeeceeecCccccccccccCCCCCc
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL-IR---ASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPID 460 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~-I~---~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 460 (564)
....-||+.||+++..++| ..++-||.- ..+- .. .-|.+.|++.+ .=-.+.+. .....
T Consensus 120 ~sk~vpGA~eFl~Yvn~~G---g~ifyiSNR-~~~~~~~~T~~nLk~~g~~~~--~~~~~llk------------k~~k~ 181 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNG---GKIFYISNR-DQENEKDGTIENLKSEGLPQV--LESHLLLK------------KDKKS 181 (274)
T ss_pred ccccCccHHHHHHHHHhcC---cEEEEEecc-chhcccchhHHHHHHcCcccc--cccceEEe------------eCCCc
Confidence 3466799999999999999 899999963 2222 11 12334454321 00011111 12234
Q ss_pred hHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHHhhCCceeecCc
Q 008479 461 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLYP 524 (564)
Q Consensus 461 K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~~~gi~~~p~~~ 524 (564)
|..+.+.+.+. ...|.+|||...|+.-....+- -. ...-+.+..+.||-.|+-+..
T Consensus 182 Ke~R~~~v~k~-----~~iVm~vGDNl~DF~d~~~k~~---~~eR~Alv~~~~~~FGk~~Ii~pN 238 (274)
T COG2503 182 KEVRRQAVEKD-----YKIVMLVGDNLDDFGDNAYKKA---EAERRALVKQNQKKFGKKFIILPN 238 (274)
T ss_pred HHHHHHHHhhc-----cceeeEecCchhhhcchhhhhh---hHHHHHHHHHHHHHhCceEEEecC
Confidence 66666665552 3567799999999977666551 11 123578888999988886653
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.064 Score=53.67 Aligned_cols=54 Identities=15% Similarity=0.092 Sum_probs=43.5
Q ss_pred CCCCCchHHHHHHHHHHhCCCCCccEEEEcC----CccchhhhhhcCc-cEEEcCChhHHHHHHh
Q 008479 455 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIGSSSSLRRVGSQ 514 (564)
Q Consensus 455 ~~~g~~K~~~l~~l~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad~-giv~~~~~~L~~~~~~ 514 (564)
...|.+|...|+.+. ..+.++++|| +.||++|+...++ |+.+.+.+.+.+.|.+
T Consensus 184 ~~~gvnKg~al~~L~------~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~~~~~~~ 242 (245)
T PLN02423 184 FPQGWDKTYCLQFLE------DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTREQCTA 242 (245)
T ss_pred eeCCCCHHHHHHHhc------CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHHHHHHHH
Confidence 345778999999998 1478999999 8999999998776 8888766666666654
|
|
| >PF01126 Heme_oxygenase: Heme oxygenase; InterPro: IPR016053 Haem oxygenase (1 | Back alignment and domain information |
|---|
Probab=93.59 E-value=4.6 Score=38.90 Aligned_cols=107 Identities=18% Similarity=0.176 Sum_probs=68.8
Q ss_pred chHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCHHHHHHHHHHH
Q 008479 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECA-----DDDDAKLSISELR 88 (564)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a-----~~~~~~~~l~~~~ 88 (564)
|+|+++|-......-...-+++|++.+..|.++.+.+..||.+=|.+....-..+....+.. ..+ ......
T Consensus 1 ~~l~~~Lr~~T~~~H~~~e~~~~~~~l~~~~~~~~~Y~~~L~~~~~~y~~lE~~l~~~~~~~~~~~~~~~-~l~R~~--- 76 (205)
T PF01126_consen 1 MSLSQRLREATRDLHERLEKSPFMKDLFAGDLSRDDYARFLQAFYHVYRALEAALDRNRDDPALAPLYFP-ELRRSA--- 76 (205)
T ss_dssp -SHHHHHHHHTHHHHHHHHTSHHHHHHHTTSSTHHHHHHHHHHHHHHHHHHHHHHHHTTTSTTTGGGS-G-HHHTHH---
T ss_pred CcHHHHHHHHHHHHHHHHHcchhHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHhhcccCCccccccCc-chhHHH---
Confidence 57888888877665566668999999999999999999999998888877666655442211 111 111111
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhc
Q 008479 89 KGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATAS 131 (564)
Q Consensus 89 ~~i~~E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~ 131 (564)
.+..-+.. -.|-+..+..++.|++..|..++...+.
T Consensus 77 -~L~~DL~~------l~~~~~~~~~~~~~a~~~~~~~i~~~~~ 112 (205)
T PF01126_consen 77 -ALEADLAA------LGGPDWRDDIEPSPATQAYVPHIRELAE 112 (205)
T ss_dssp -HHHHHHHH------HHCTTHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHH------hhCCCcccccCCChhHHHHHHHHHHHHc
Confidence 11111111 1121222345678999999999988874
|
14.99.3 from EC) (HO) [] is the microsomal enzyme that, in animals, carries out the oxidation of haem, it cleaves the haem ring at the alpha-methene bridge to form biliverdin and carbon monoxide []. Biliverdin is subsequently converted to bilirubin by biliverdin reductase. In mammals there are three isozymes of haem oxygenase: HO-1 to HO-3. The first two isozymes differ in their tissue expression and their inducibility: HO-1 is highly inducible by its substrate haem and by various non-haem substances, while HO-2 is non-inducible. It has been suggested [] that HO-2 could be implicated in the production of carbon monoxide in the brain where it is said to act as a neurotransmitter. In the genome of the chloroplast of red algae as well as in cyanobacteria, there is a haem oxygenase (gene pbsA) that is the key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae []. A haem oxygenase is also present in the bacteria Corynebacterium diphtheriae (gene hmuO), where it is involved in the acquisition of iron from the host haem []. There is, in the central section of these enzymes, a well-conserved region centred on a histidine residue.; GO: 0004392 heme oxygenase (decyclizing) activity, 0006788 heme oxidation, 0055114 oxidation-reduction process; PDB: 1J77_A 1P3U_A 1P3V_A 1P3T_A 1WNW_B 1WNX_B 1IW1_B 1WNV_C 1V8X_A 1WZG_B .... |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.16 Score=57.87 Aligned_cols=111 Identities=17% Similarity=0.208 Sum_probs=61.3
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEe-eceeecC-----cccccccccc-----C
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHA-NEFSFKE-----SISTGEIIEK-----V 455 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~a-N~l~~~~-----g~~tG~~~~~-----~ 455 (564)
+.|+...+-+..|+..| ++++.|++-- .---+++..+-|+ ++ +.-.+++ +...-.++++ +
T Consensus 590 PPR~~vP~Av~~CrsAG---IkvimVTgdh-piTAkAiA~~vgI-----i~~~~et~e~~a~r~~~~v~~vn~~~a~a~V 660 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAG---IKVIMVTGDH-PITAKAIAKSVGI-----ISEGSETVEDIAKRLNIPVEQVNSRDAKAAV 660 (1019)
T ss_pred CCcccCchhhhhhhhhC---ceEEEEecCc-cchhhhhhhheee-----ecCCchhhhhhHHhcCCcccccCccccceEE
Confidence 78888899999999999 9999999753 3333444444331 11 0000100 0000000000 1
Q ss_pred CCCCch----HHHHHHHHHHhC-C------------------CCCccEEEEcCCccchhhhhhcCccEEEc-CCh
Q 008479 456 ESPIDK----VQAFNNTLEKYG-T------------------DRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSS 506 (564)
Q Consensus 456 ~~g~~K----~~~l~~l~~~~~-~------------------~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~ 506 (564)
.+|.++ .+-+.+++..+. + ..+.-|-..|||+||-++|+.|||||++| +.+
T Consensus 661 ihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGS 735 (1019)
T KOG0203|consen 661 IHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGS 735 (1019)
T ss_pred EecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccc
Confidence 223222 233444443322 0 01233447899999999999999999997 444
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.70 E-value=0.14 Score=51.13 Aligned_cols=39 Identities=18% Similarity=0.147 Sum_probs=33.8
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhc
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 496 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~A 496 (564)
.+.+|...++.+++..+.. ...++|+||+.||..|+..+
T Consensus 164 ~~~~Kg~a~~~~~~~~~~~-~~~~i~iGD~~~D~~~~~~~ 202 (244)
T TIGR00685 164 RFVNKGEIVKRLLWHQPGS-GISPVYLGDDITDEDAFRVV 202 (244)
T ss_pred CCCCHHHHHHHHHHhcccC-CCceEEEcCCCcHHHHHHHH
Confidence 4678999999999877653 46899999999999999998
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >COG5398 Heme oxygenase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.24 E-value=12 Score=36.29 Aligned_cols=175 Identities=18% Similarity=0.225 Sum_probs=98.3
Q ss_pred hcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCCcc
Q 008479 32 MYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK-GVLEELKMHDSFVKEWGTDLA 110 (564)
Q Consensus 32 ~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~-~i~~E~~~h~~~~~~~gi~~~ 110 (564)
-+..|+..+-.|-++.+.|+..+.|=+.+..++-++..... +++ .+..+.. .+.+--.+-+.+...+|-+..
T Consensus 19 Env~fmkcfLkg~V~~e~f~kl~~n~yf~ysaleaa~~~~~---d~~----~l~~i~fp~lnr~~tle~dl~~yyg~nwr 91 (238)
T COG5398 19 ENVGFMKCFLKGVVERESFRKLLANLYFVYSALEAATQIHK---DNP----ILSSIYFPELNRKATLEKDLLYYYGNNWR 91 (238)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHhc---cCc----hhhhccchhhhhHHHhhcCHHHHhcccHH
Confidence 34569999999999999999999999988887776544322 221 1111100 111112233344555664555
Q ss_pred cccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHH------HHHHHHHhh-ccCCCC
Q 008479 111 KMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYA------FLGKEFHAL-LNANEG 183 (564)
Q Consensus 111 ~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~------~i~~~~~~~-~~~~~~ 183 (564)
+.+.++|++.+|++++...+.... +.|+ .-|+.-|. .+-++++.. ......
T Consensus 92 e~I~~sp~t~~yv~rv~~iaa~ap--------------------~lLI--ah~ytRyLGdlsggq~l~ki~q~~~~L~~~ 149 (238)
T COG5398 92 ENIQPSPATIAYVDRVRYIAATAP--------------------ELLI--AHNYTRYLGDLSGGQILKKIAQSALELSEG 149 (238)
T ss_pred HhcCcChhHHHHHHHHHHHHhcCc--------------------chhH--HHHHHHHHhcCCCcHHHHHHHHHHhccccc
Confidence 678999999999999999885321 1122 23433331 122333321 111112
Q ss_pred cccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhh
Q 008479 184 NHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240 (564)
Q Consensus 184 ~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw 240 (564)
+.-+.++=+. ++=..+-..+++.+|++ ++++++..++.+--.-+..+-.+.+
T Consensus 150 gtaFy~F~dl---~dek~fK~~YR~~ld~l--~ldeAt~~rIvdeAn~aF~~N~~~~ 201 (238)
T COG5398 150 GTAFYEFEDL---GDEKAFKDEYRQNLDSL--ELDEATKLRIVDEANDAFDFNMQMF 201 (238)
T ss_pred cceeeeHhhc---chhhhHHHHHHHHhhcc--cccHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223333332 24455666788888865 4788887777665444444333333
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.11 E-value=0.5 Score=53.84 Aligned_cols=112 Identities=13% Similarity=0.167 Sum_probs=65.3
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCC-c-eeE-------Eeeceeec--Ccc-------
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN-A-LNV-------HANEFSFK--ESI------- 446 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~-~-~~I-------~aN~l~~~--~g~------- 446 (564)
..+++|..++.++.+...+ +.++.|+|.- .--.-++.++.|+- . ..| --|...+. ||.
T Consensus 673 ~CPlK~Ds~~~I~el~~SS---H~vvMITGDn-pLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p 748 (1160)
T KOG0209|consen 673 SCPLKPDSKKTIKELNNSS---HRVVMITGDN-PLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKP 748 (1160)
T ss_pred eCCCCccHHHHHHHHhccC---ceEEEEeCCC-ccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCC
Confidence 6899999999999999766 9999999863 33333444433320 0 000 11223321 111
Q ss_pred --------------cccccccc------------------CCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhh
Q 008479 447 --------------STGEIIEK------------------VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLL 494 (564)
Q Consensus 447 --------------~tG~~~~~------------------~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~ 494 (564)
.||.-... -.....|..++..+++ .+..+.+.|||.||..+|+
T Consensus 749 ~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~-----~Gy~TLMCGDGTNDVGALK 823 (1160)
T KOG0209|consen 749 GKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKK-----LGYVTLMCGDGTNDVGALK 823 (1160)
T ss_pred CccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHh-----cCeEEEEecCCCcchhhhh
Confidence 11110000 0112234444444443 2467899999999999999
Q ss_pred hcCccEEEcCC
Q 008479 495 EADIGIVIGSS 505 (564)
Q Consensus 495 ~Ad~giv~~~~ 505 (564)
+|++||++-++
T Consensus 824 ~AhVGVALL~~ 834 (1160)
T KOG0209|consen 824 QAHVGVALLNN 834 (1160)
T ss_pred hcccceehhcC
Confidence 99999998644
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.70 E-value=0.8 Score=42.99 Aligned_cols=88 Identities=18% Similarity=0.212 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCCCCCcEEEEccccC--HHHHHHHHhh-cCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHH
Q 008479 392 CTTFFQKVVKNENLNANVHVLSYCWC--GDLIRASFSS-AGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNT 468 (564)
Q Consensus 392 ~~efl~~l~~~g~~~~~~~IvS~g~s--~~~I~~~l~~-~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l 468 (564)
+..+++.++++| ..++.|++--- -+-+...|.+ +.+.++ |.+. ++|.- +-..-.+|...+++
T Consensus 119 A~qLI~MHq~RG---D~i~FvTGRt~gk~d~vsk~Lak~F~i~~m----~pv~-----f~Gdk--~k~~qy~Kt~~i~~- 183 (237)
T COG3700 119 ARQLIDMHQRRG---DAIYFVTGRTPGKTDTVSKTLAKNFHITNM----NPVI-----FAGDK--PKPGQYTKTQWIQD- 183 (237)
T ss_pred HHHHHHHHHhcC---CeEEEEecCCCCcccccchhHHhhcccCCC----ccee-----eccCC--CCcccccccHHHHh-
Confidence 356889999999 88999987310 1122222322 111111 2222 33321 11234567766553
Q ss_pred HHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEE
Q 008479 469 LEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 502 (564)
Q Consensus 469 ~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~ 502 (564)
...-|.+|||-+|+.+.+.|++ ||-+
T Consensus 184 --------~~~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 184 --------KNIRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred --------cCceEEecCCchhhhHHHhcCccceeE
Confidence 1346899999999999999997 6544
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.68 E-value=0.13 Score=61.41 Aligned_cols=45 Identities=24% Similarity=0.406 Sum_probs=35.4
Q ss_pred CCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCCh
Q 008479 458 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 506 (564)
Q Consensus 458 g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~ 506 (564)
+..|..+.+-.++. .+..+.+||||.||..|+..||+||.|...+
T Consensus 779 PlQKA~Vv~lVk~~----~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~E 823 (1151)
T KOG0206|consen 779 PLQKALVVKLVKKG----LKAVTLAIGDGANDVSMIQEAHVGVGISGQE 823 (1151)
T ss_pred HHHHHHHHHHHHhc----CCceEEEeeCCCccchheeeCCcCeeeccch
Confidence 35777777766432 2467889999999999999999999997654
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=91.49 E-value=1.5 Score=41.35 Aligned_cols=105 Identities=14% Similarity=0.125 Sum_probs=62.0
Q ss_pred HHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecC-ccc-cccccccCCCC
Q 008479 381 KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE-SIS-TGEIIEKVESP 458 (564)
Q Consensus 381 ~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~-g~~-tG~~~~~~~~g 458 (564)
+.++.+.|.|+..+.++.++++| +++.|-|-.+..+..+.+|+..++. ..++ ++. ...|...-+..
T Consensus 39 ~~g~~v~lypdv~~iL~~L~~~g---v~lavASRt~~P~~A~~~L~~l~i~---------~~~~~~~~~~~~F~~~eI~~ 106 (169)
T PF12689_consen 39 SRGEEVSLYPDVPEILQELKERG---VKLAVASRTDEPDWARELLKLLEID---------DADGDGVPLIEYFDYLEIYP 106 (169)
T ss_dssp TT--EE---TTHHHHHHHHHHCT-----EEEEE--S-HHHHHHHHHHTT-C-------------------CCECEEEESS
T ss_pred CCCCEEEeCcCHHHHHHHHHHCC---CEEEEEECCCChHHHHHHHHhcCCC---------ccccccccchhhcchhheec
Confidence 44668999999999999999999 9999999777788999999987764 0000 110 01111111122
Q ss_pred CchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc
Q 008479 459 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 498 (564)
Q Consensus 459 ~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 498 (564)
.+|...++++.+..++ .+..++++=|-..-......-||
T Consensus 107 gsK~~Hf~~i~~~tgI-~y~eMlFFDDe~~N~~~v~~lGV 145 (169)
T PF12689_consen 107 GSKTTHFRRIHRKTGI-PYEEMLFFDDESRNIEVVSKLGV 145 (169)
T ss_dssp S-HHHHHHHHHHHH----GGGEEEEES-HHHHHHHHTTT-
T ss_pred CchHHHHHHHHHhcCC-ChhHEEEecCchhcceeeEecCc
Confidence 3899999999998877 46889999998887777666554
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.42 E-value=0.25 Score=52.59 Aligned_cols=47 Identities=26% Similarity=0.304 Sum_probs=37.5
Q ss_pred CCCchHHHHHHHHHHhCCCCCcc--EEEEcCCccchhhhhh-----cCccEEEc
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNL--SVYIGDSVGDLLCLLE-----ADIGIVIG 503 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~--viyiGDs~~Dl~~l~~-----Ad~giv~~ 503 (564)
.+.+|...++.+++..+....+. .+||||+.||..|+.. +++||.++
T Consensus 298 ~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg 351 (384)
T PLN02580 298 IDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS 351 (384)
T ss_pred CCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe
Confidence 46799999999998876533222 4899999999999996 47788886
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=91.14 E-value=2.5 Score=42.77 Aligned_cols=91 Identities=18% Similarity=0.139 Sum_probs=53.3
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
..+.-||+.+|++.++++| +.+++||+=- ....-...|.+.|++.- .+|...+. +.- .+.....-|.
T Consensus 143 ~ApAlp~al~ly~~l~~~G---~kIf~VSgR~e~~r~aT~~NL~kaGy~~~----~~LiLR~~---~D~-~~~~av~yKs 211 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLG---FKIIFLSGRLKDKQAVTEANLKKAGYHTW----EKLILKDP---QDN-SAENAVEYKT 211 (275)
T ss_pred cCCCChHHHHHHHHHHHCC---CEEEEEeCCchhHHHHHHHHHHHcCCCCc----ceeeecCC---CCC-ccchhHHHHH
Confidence 4566789999999999999 9999999842 13444555666776421 22333211 000 0001112355
Q ss_pred HHHHHHHHHhCCCCCccEE-EEcCCccchh
Q 008479 463 QAFNNTLEKYGTDRKNLSV-YIGDSVGDLL 491 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~vi-yiGDs~~Dl~ 491 (564)
...+++.++ +.+++ .|||-.+|+.
T Consensus 212 ~~R~~li~e-----GYrIv~~iGDq~sDl~ 236 (275)
T TIGR01680 212 AARAKLIQE-----GYNIVGIIGDQWNDLK 236 (275)
T ss_pred HHHHHHHHc-----CceEEEEECCCHHhcc
Confidence 555555542 34555 7999999994
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=90.96 E-value=0.51 Score=37.78 Aligned_cols=42 Identities=26% Similarity=0.384 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCC-ccchhhhhhcCc-cEEEcC
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVIGS 504 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~-giv~~~ 504 (564)
...+...++..+.+ ..++++|||+ .+|+.+...+++ +|.+..
T Consensus 7 p~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~t 50 (75)
T PF13242_consen 7 PGMLEQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVLT 50 (75)
T ss_dssp HHHHHHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEESS
T ss_pred HHHHHHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEECC
Confidence 34566666666543 5789999999 999999999999 666653
|
... |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=89.50 E-value=0.3 Score=56.77 Aligned_cols=48 Identities=21% Similarity=0.248 Sum_probs=38.6
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhc---CccEEEcCCh
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA---DIGIVIGSSS 506 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~A---d~giv~~~~~ 506 (564)
..+.+|...++.+++.. ..+.++++||+.||..|+..+ +++|.++.++
T Consensus 653 p~~vnKG~al~~ll~~~---~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~ 703 (726)
T PRK14501 653 PAGVNKGRAVRRLLEAG---PYDFVLAIGDDTTDEDMFRALPETAITVKVGPGE 703 (726)
T ss_pred ECCCCHHHHHHHHHhcC---CCCEEEEECCCCChHHHHHhcccCceEEEECCCC
Confidence 34668999999998732 347899999999999999986 5688888654
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.08 E-value=3.8 Score=38.32 Aligned_cols=88 Identities=15% Similarity=0.191 Sum_probs=61.6
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
+-...|...+.+..+++.| +.++|||.+ +..-+..++++.|++.+ +.-++ +. ...
T Consensus 44 ~~~~tpe~~~W~~e~k~~g---i~v~vvSNn-~e~RV~~~~~~l~v~fi--------~~A~K-------P~------~~~ 98 (175)
T COG2179 44 NPDATPELRAWLAELKEAG---IKVVVVSNN-KESRVARAAEKLGVPFI--------YRAKK-------PF------GRA 98 (175)
T ss_pred CCCCCHHHHHHHHHHHhcC---CEEEEEeCC-CHHHHHhhhhhcCCcee--------ecccC-------cc------HHH
Confidence 3466777888888888888 999999987 58888888888775311 11111 11 134
Q ss_pred HHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCc
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI 498 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~ 498 (564)
+++-+++.+.+ .++++.|||.. ||+..-..+++
T Consensus 99 fr~Al~~m~l~-~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 99 FRRALKEMNLP-PEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred HHHHHHHcCCC-hhHEEEEcchhhhhhhcccccCc
Confidence 45555555553 58999999995 89998888887
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=87.72 E-value=1.1 Score=45.74 Aligned_cols=51 Identities=12% Similarity=0.074 Sum_probs=41.8
Q ss_pred cCCCC-ccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeec
Q 008479 385 RLSLQ-DGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANE 439 (564)
Q Consensus 385 ~i~lr-~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~ 439 (564)
++++| ||..++++.++++| +++.|+|.|- .+.+...|+..|+.. ..|+||.
T Consensus 143 ~v~irdPgV~EaL~~LkekG---ikLaIaTS~~-Re~v~~~L~~lGLd~YFdvIIs~G 196 (301)
T TIGR01684 143 PVRIRDPRIYDSLTELKKRG---CILVLWSYGD-RDHVVESMRKVKLDRYFDIIISGG 196 (301)
T ss_pred ccccCCHHHHHHHHHHHHCC---CEEEEEECCC-HHHHHHHHHHcCCCcccCEEEECC
Confidence 46788 99999999999999 9999999985 888999999988753 2344444
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=86.80 E-value=3.2 Score=43.63 Aligned_cols=110 Identities=23% Similarity=0.229 Sum_probs=67.3
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhc-C-------CCc--eeEE--eeceee-cCcc-----
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSA-G-------LNA--LNVH--ANEFSF-KESI----- 446 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~-g-------~~~--~~I~--aN~l~~-~~g~----- 446 (564)
-+...||..++++.++++| .++.|+|.+- .++++.++... | +.. ..|+ |+...| .++.
T Consensus 182 yv~~~pgl~elL~~Lr~~G---~klfLvTNS~-~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v 257 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHG---KKLFLLTNSD-YDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQV 257 (343)
T ss_pred HhccchhHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEE
Confidence 4677999999999999998 9999999985 88999988874 4 211 2233 333333 1111
Q ss_pred --cccccc---------ccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCC-ccchhhhh-hcCc-cEEEc
Q 008479 447 --STGEII---------EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLL-EADI-GIVIG 503 (564)
Q Consensus 447 --~tG~~~---------~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs-~~Dl~~l~-~Ad~-giv~~ 503 (564)
.+|... +.+.+| +-...+.+++. . .+.+++||||. .+|+.... .++. .+.|.
T Consensus 258 ~~~~g~~~~~~~~~l~~g~vY~g-Gn~~~~~~~l~---~-~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~ 323 (343)
T TIGR02244 258 DVETGSLKWGEVDGLEPGKVYSG-GSLKQFHELLK---W-RGKEVLYFGDHIYGDLLRSKKKRGWRTAAII 323 (343)
T ss_pred eCCCCcccCCccccccCCCeEeC-CCHHHHHHHHC---C-CCCcEEEECCcchHHHHhhHHhcCcEEEEEc
Confidence 122211 111111 22234444443 2 24789999997 48888887 6776 44454
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=85.75 E-value=1.6 Score=44.64 Aligned_cols=51 Identities=8% Similarity=0.072 Sum_probs=41.8
Q ss_pred cCCCC-ccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeec
Q 008479 385 RLSLQ-DGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANE 439 (564)
Q Consensus 385 ~i~lr-~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~ 439 (564)
++++| ||..++++.++++| +++.|+|.|- .+.++..|+..|+... .|+|+.
T Consensus 145 ~v~irdp~V~EtL~eLkekG---ikLaIvTNg~-Re~v~~~Le~lgL~~yFDvII~~g 198 (303)
T PHA03398 145 PVRIRDPFVYDSLDELKERG---CVLVLWSYGN-REHVVHSLKETKLEGYFDIIICGG 198 (303)
T ss_pred ccccCChhHHHHHHHHHHCC---CEEEEEcCCC-hHHHHHHHHHcCCCccccEEEECC
Confidence 46788 99999999999999 9999999884 8889999999887532 355554
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=84.14 E-value=1.4 Score=43.75 Aligned_cols=38 Identities=26% Similarity=0.326 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCC-ccchhhhhhcCcc
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIG 499 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~g 499 (564)
...++..++..+.....++++|||+ .+|+.+...+++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 4566666666543234589999999 6999999999984
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.85 E-value=0.85 Score=53.00 Aligned_cols=44 Identities=25% Similarity=0.314 Sum_probs=35.6
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
...+|.+.+.++.+ .+..+-+.|||.||--+|+.||+||.+...
T Consensus 837 sP~qK~~Lie~lQk-----l~y~VgfCGDGANDCgALKaAdvGISLSea 880 (1140)
T KOG0208|consen 837 SPDQKAELIEALQK-----LGYKVGFCGDGANDCGALKAADVGISLSEA 880 (1140)
T ss_pred CchhHHHHHHHHHh-----cCcEEEecCCCcchhhhhhhcccCcchhhh
Confidence 45678877777665 246788999999999999999999998633
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=82.91 E-value=1.1 Score=52.72 Aligned_cols=40 Identities=18% Similarity=0.117 Sum_probs=32.0
Q ss_pred CCCchHHHHHHHHHH---hCCCCCccEEEEcCCccchhhhhhcC
Q 008479 457 SPIDKVQAFNNTLEK---YGTDRKNLSVYIGDSVGDLLCLLEAD 497 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~---~~~~~~~~viyiGDs~~Dl~~l~~Ad 497 (564)
.+.+|...++.+++. .+. ..+.++++||+.||..|+..++
T Consensus 759 ~gvnKG~Al~~Ll~~~~~~g~-~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 759 QGVSKGLVAKRLLSIMQERGM-LPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred CCCCHHHHHHHHHHHHHhcCC-CcccEEEEcCCccHHHHHHHhh
Confidence 467899999998753 232 2468999999999999999875
|
|
| >PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function | Back alignment and domain information |
|---|
Probab=82.75 E-value=4.7 Score=34.54 Aligned_cols=76 Identities=17% Similarity=0.219 Sum_probs=46.5
Q ss_pred cEEEEccc-c-CHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcC
Q 008479 408 NVHVLSYC-W-CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGD 485 (564)
Q Consensus 408 ~~~IvS~g-~-s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGD 485 (564)
|++=||.+ | --++++..+..+|++.-.++-.++ ++..++-+.. ....-|...+++++.... ..+.|.|||
T Consensus 1 pf~YvS~SPwnly~~l~~Fl~~~~~P~G~~~Lr~~---~~~~~~~~~~--~~~~~K~~~i~~i~~~fP---~~kfiLIGD 72 (100)
T PF09949_consen 1 PFFYVSNSPWNLYPFLRDFLRRNGFPAGPLLLRDY---GPSLSGLFKS--GAEEHKRDNIERILRDFP---ERKFILIGD 72 (100)
T ss_pred CEEEEcCCHHHHHHHHHHHHHhcCCCCCceEcccC---CccccccccC--CchhHHHHHHHHHHHHCC---CCcEEEEee
Confidence 46667774 1 146677778777877666665555 2222222211 111469999999998652 468999999
Q ss_pred Cc-cchh
Q 008479 486 SV-GDLL 491 (564)
Q Consensus 486 s~-~Dl~ 491 (564)
|- .|.+
T Consensus 73 sgq~Dpe 79 (100)
T PF09949_consen 73 SGQHDPE 79 (100)
T ss_pred CCCcCHH
Confidence 74 4543
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.96 E-value=1.4 Score=42.92 Aligned_cols=43 Identities=28% Similarity=0.224 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHhCCCCCcc-EEEEcCCccchhhhhhcCccEEEc
Q 008479 461 KVQAFNNTLEKYGTDRKNL-SVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 461 K~~~l~~l~~~~~~~~~~~-viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
|.++.+-+++.+..-.+.+ ++.+|||.||++|+...|..++++
T Consensus 192 Kg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~d~AfiV~ 235 (274)
T COG3769 192 KGQAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVMDYAFIVK 235 (274)
T ss_pred ccHHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhhhhheeec
Confidence 5554444443332212345 778999999999999999888875
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=80.05 E-value=8.3 Score=39.92 Aligned_cols=86 Identities=21% Similarity=0.153 Sum_probs=49.1
Q ss_pred CCccHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHH
Q 008479 388 LQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 465 (564)
Q Consensus 388 lr~G~~efl~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 465 (564)
+-||..++++.++++| .+++++|.+- +..-+..-|++.|++. .. +.+++.. ..+
T Consensus 45 ~~~ga~e~l~~lr~~g---~~~~~~TN~~~~~~~~~~~~l~~lGi~~--------~~-~~I~ts~------------~~~ 100 (311)
T PLN02645 45 LIEGVPETLDMLRSMG---KKLVFVTNNSTKSRAQYGKKFESLGLNV--------TE-EEIFSSS------------FAA 100 (311)
T ss_pred cCcCHHHHHHHHHHCC---CEEEEEeCCCCCCHHHHHHHHHHCCCCC--------Ch-hhEeehH------------HHH
Confidence 4599999999999999 9999999863 1222333345666421 00 1121110 122
Q ss_pred HHHHHHhCCCCCccEEEEcCCccchhhhhhcCc
Q 008479 466 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 498 (564)
Q Consensus 466 ~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 498 (564)
..++...+.. ....+|++++.+|...+..+++
T Consensus 101 ~~~l~~~~~~-~~~~V~viG~~~~~~~l~~~Gi 132 (311)
T PLN02645 101 AAYLKSINFP-KDKKVYVIGEEGILEELELAGF 132 (311)
T ss_pred HHHHHhhccC-CCCEEEEEcCHHHHHHHHHCCC
Confidence 2333322211 1235788888888888877765
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 564 | ||||
| 2rd3_A | 223 | Crystal Structure Of Tena Homologue (Hp1287) From H | 4e-09 | ||
| 3ibx_A | 221 | Crystal Structure Of F47y Variant Of Tena (Hp1287) | 9e-09 | ||
| 2gm7_A | 221 | Tena HomologTHI-4 Thiaminase From Pyrobaculum Aerop | 2e-06 | ||
| 3mvu_A | 226 | Crystal Structure Of A Tena Family Transcription Re | 8e-06 | ||
| 1yaf_A | 263 | Structure Of Tena From Bacillus Subtilis Length = 2 | 6e-05 | ||
| 2qcx_A | 263 | Crystal Structure Of Bacillus Subtilis Tena Y112f M | 9e-05 | ||
| 1tyh_A | 248 | Crystal Structure Of Transcriptional Activator Tena | 2e-04 | ||
| 1to9_A | 260 | Crystal Structure Of Thi-4 Protein From Bacillus Su | 3e-04 | ||
| 1to9_B | 260 | Crystal Structure Of Thi-4 Protein From Bacillus Su | 3e-04 |
| >pdb|2RD3|A Chain A, Crystal Structure Of Tena Homologue (Hp1287) From Helicobacter Pylori Length = 223 | Back alignment and structure |
|
| >pdb|3IBX|A Chain A, Crystal Structure Of F47y Variant Of Tena (Hp1287) From Helicobacter Pylori Length = 221 | Back alignment and structure |
|
| >pdb|2GM7|A Chain A, Tena HomologTHI-4 Thiaminase From Pyrobaculum Aerophilum Length = 221 | Back alignment and structure |
|
| >pdb|3MVU|A Chain A, Crystal Structure Of A Tena Family Transcription Regulator (Tm1040_3656) From Silicibacter Sp. Tm1040 At 1.80 A Resolu Length = 226 | Back alignment and structure |
|
| >pdb|1YAF|A Chain A, Structure Of Tena From Bacillus Subtilis Length = 263 | Back alignment and structure |
|
| >pdb|2QCX|A Chain A, Crystal Structure Of Bacillus Subtilis Tena Y112f Mutant Complexed With Formyl Aminomethyl Pyrimidine Length = 263 | Back alignment and structure |
|
| >pdb|1TYH|A Chain A, Crystal Structure Of Transcriptional Activator Tena From Bacillus Subtilis Length = 248 | Back alignment and structure |
|
| >pdb|1TO9|A Chain A, Crystal Structure Of Thi-4 Protein From Bacillus Subtilis Length = 260 | Back alignment and structure |
|
| >pdb|1TO9|B Chain B, Crystal Structure Of Thi-4 Protein From Bacillus Subtilis Length = 260 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 564 | |||
| 2a2m_A | 258 | Hypothetical protein BT3146; putative TENA family | 7e-42 | |
| 3ibx_A | 221 | TENA, HP1287, putative thiaminase II; vitamin B1, | 4e-39 | |
| 2qcx_A | 263 | Transcriptional activator TENA; UP-DOWN bundle, hy | 3e-38 | |
| 1rtw_A | 220 | Transcriptional activator, putative; PF1337, TENA, | 3e-37 | |
| 2f2g_A | 221 | SEED maturation protein PM36 homolog; TENA_THI-4 d | 8e-37 | |
| 2gm8_A | 221 | TENA homolog/THI-4 thiaminase; transcription, tran | 2e-36 | |
| 3no6_A | 248 | Transcriptional activator TENA; structural genomic | 4e-36 | |
| 1udd_A | 226 | Transcriptional regulator; helix-bundle, lipid bin | 5e-36 | |
| 2qzc_A | 214 | Transcriptional activator TENA-1; heme oxygenase-l | 5e-36 | |
| 3mvu_A | 226 | TENA family transcriptional regulator; TENA/THI-4/ | 6e-35 | |
| 1z72_A | 225 | Transcriptional regulator, putative; structu genom | 7e-32 | |
| 3rm5_A | 550 | Hydroxymethylpyrimidine/phosphomethylpyrimidine K | 1e-29 | |
| 1wwm_A | 190 | Hypothetical protein TT2028; TENA/THI-4 family, pu | 6e-17 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 1rcw_A | 231 | CT610, CADD; iron, DI-iron, redox enzyme, metallo | 1e-07 | |
| 2g09_A | 297 | Cytosolic 5'-nucleotidase III; uniprot Q9D020, UMP | 3e-07 | |
| 3oql_A | 262 | TENA homolog; transcriptional activator, structura | 5e-07 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 2e-06 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 4e-06 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 8e-06 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 5e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 7e-05 |
| >2a2m_A Hypothetical protein BT3146; putative TENA family transcriptional regulator, structural G joint center for structural genomics; 1.88A {Bacteroides thetaiotaomicron} SCOP: a.132.1.3 PDB: 2a2o_A Length = 258 | Back alignment and structure |
|---|
Score = 150 bits (379), Expect = 7e-42
Identities = 39/239 (16%), Positives = 82/239 (34%), Gaps = 29/239 (12%)
Query: 4 IPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKA 63
KS P + L +LW +V + + + +A+G L + + QD ++
Sbjct: 38 TTLKSDVPAADSLFWKLWNGSLDTAVQVLQTDYFKGIAAGTLDPNAYGSLMVQDGYYCFR 97
Query: 64 FSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYT 123
Y A CA D+ + K E ++++ + W A + Y
Sbjct: 98 GRDDYATAATCAQDETLREFFKAKAKSYDE---YNETYHQTWHLREASGLIPGTDIKDYA 154
Query: 124 EFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEG 183
++ A + + Y M PC L+ ++ L
Sbjct: 155 DYEAYVA------------------GSLASPYMCVVMLPCEYLWPWIANF---LDGYTPT 193
Query: 184 NHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCA 242
N Y WI+ A + ++L++ + ++ ++++ AM E++ F +
Sbjct: 194 NSLYRFWIEWNGGTPNGAYQM--GNMLEQYRDKIDEDKA---VEIFNTAMNYELKVFTS 247
|
| >3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrol; 2.40A {Helicobacter pylori} PDB: 2rd3_A Length = 221 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 4e-39
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90
+ PF + G L+ + FR YI QD+ +L +++ + L A D+ S +
Sbjct: 22 CISHPFVQGIGRGTLERDKFRFYIIQDYLYLLEYAKVFALGVVKACDEAVMREFSNAIQD 81
Query: 91 VLE-ELKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPF 147
+L E+ +H+ +++E ++ A YT ++LA
Sbjct: 82 ILNNEMSIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEG----------------- 124
Query: 148 EKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNE 207
A+ C Y + + + NA E + Y WI YSS+ FQA N
Sbjct: 125 -FKGSIKEVAAAVLSCGWSYLVIAQNLSQIPNALE-HAFYGHWIKGYSSKEFQACVNWNI 182
Query: 208 DLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+LLD L+++ + +E++ +++++ + E F+
Sbjct: 183 NLLDSLTLASSKQEIEKLKEIFITTSEYEYLFW 215
|
| >2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET: PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A* 1to9_A* 1tyh_A Length = 263 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 3e-38
Identities = 41/241 (17%), Positives = 88/241 (36%), Gaps = 24/241 (9%)
Query: 3 AIPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLK 62
++ + + + PF + G L ++ F++Y+ QD ++L
Sbjct: 17 KAGSENLYFQGMKFSEECRSAAAEWWEGSFVHPFVQGIGDGTLPIDRFKYYVLQDSYYLT 76
Query: 63 AFSQAYELAEECADDDDAKLSISELRKGVLE-ELKMHDSFVKEWGTDLAKMATV--NSAT 119
F++ A D ++ +G E E+ +H F + + +
Sbjct: 77 HFAKVQSFGAAYAKDLYTTGRMASHAQGTYEAEMALHREFAELLEISEEERKAFKPSPTA 136
Query: 120 VKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLN 179
+T + + + A L A+ PC LY +G+ LL+
Sbjct: 137 YSFTSHMYRSV------------------LSGNFAEILAALLPCYWLYYEVGE---KLLH 175
Query: 180 ANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEF 239
+ G+ Y KWI Y + F+ + + D+L+ + T E +++ + + E +F
Sbjct: 176 CDPGHPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKENFVISSYYEYQF 235
Query: 240 F 240
+
Sbjct: 236 W 236
|
| >1rtw_A Transcriptional activator, putative; PF1337, TENA, thiamin, structural genomics, PSI, protein STR initiative; HET: MP5; 2.35A {Pyrococcus furiosus} SCOP: a.132.1.3 Length = 220 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 3e-37
Identities = 41/210 (19%), Positives = 82/210 (39%), Gaps = 24/210 (11%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90
+ F + +A +K E F ++ D++F+K + L A DD +E
Sbjct: 17 FLPHKFLIEMAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPDDLLPFF-AESIYY 75
Query: 91 VLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKT 150
+ +EL+M + +E G L ++ Y +LL+ AS G
Sbjct: 76 ISKELEMFEKKAQELGISLNGE--IDWRAKSYVNYLLSVAS------LGS---------- 117
Query: 151 KVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLL 210
A+ + Y K + + PY ++I+++SS+ F + E +L
Sbjct: 118 --FLEGFTALYCEEKAYYEAWKW---VRENLKERSPYQEFINHWSSQEFGEYVKRIEKIL 172
Query: 211 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+ L+ E + +++ + K E+ F+
Sbjct: 173 NSLAEKHGEFEKERAREVFKEVSKFELIFW 202
|
| >2f2g_A SEED maturation protein PM36 homolog; TENA_THI-4 domain, TENA/THI-4/PQQC family, AT3G16990, struct genomics, protein structure initiative; HET: HMH; 2.10A {Arabidopsis thaliana} SCOP: a.132.1.3 PDB: 2q4x_A* Length = 221 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 8e-37
Identities = 38/214 (17%), Positives = 78/214 (36%), Gaps = 24/214 (11%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLS----ISE 86
A F V + G++ L +FR ++ QD+ F++ F A D + S +
Sbjct: 21 ATRHAFVVSIRDGSVDLSSFRTWLGQDYLFVRRFVPFVASVLIRACKDSGESSDMEVVLG 80
Query: 87 LRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATP 146
+ +E++ +W D + A +Y FL S +V+
Sbjct: 81 GIASLNDEIEWFKREGSKWDVDFS-TVVPQRANQEYGRFLEDLMSSEVK----------- 128
Query: 147 FEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN 206
+ A +Y H L + N+ T + ++ F+
Sbjct: 129 ------YPVIMTAFWAIEAVYQESFA--HCLEDGNKTPVELTGACHRWGNDGFKQYCSSV 180
Query: 207 EDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+++ ++ + +GE L E + + ++LEV F+
Sbjct: 181 KNIAERCLENASGEVLGEAEDVLVRVLELEVAFW 214
|
| >2gm8_A TENA homolog/THI-4 thiaminase; transcription, transferase; HET: HMH; 2.50A {Pyrobaculum aerophilum} SCOP: a.132.1.3 PDB: 2gm7_A* Length = 221 | Back alignment and structure |
|---|
Score = 134 bits (337), Expect = 2e-36
Identities = 53/230 (23%), Positives = 91/230 (39%), Gaps = 27/230 (11%)
Query: 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEE 73
G+ L + + PF L +G L +E F++Y+ QD+++L F++A LA
Sbjct: 9 HGVTGELRRRADGIWQRILAHPFVAELYAGTLPMEKFKYYLLQDYNYLVNFAKALSLAAS 68
Query: 74 CADDDDAKLSISELRKGVL-EELKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATA 130
A D + EL G + E+ +++ +KE G L A N V Y +L +T
Sbjct: 69 RAPSVDLMKTALELAYGTVTGEMANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTC 128
Query: 131 SGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKW 190
+ + A+ PC YA + + L N H Y KW
Sbjct: 129 ------------------ALEGFYQCMAALLPCFWSYAEIAERHGGKLRENP-VHVYKKW 169
Query: 191 IDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
Y S ++ + +LD +G + + + +A E+EF+
Sbjct: 170 ASVYLSPEYRGLVERLRAVLDS-----SGLSAEELWPYFKEASLYELEFW 214
|
| >3no6_A Transcriptional activator TENA; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.65A {Staphylococcus epidermidis} Length = 248 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 4e-36
Identities = 45/214 (21%), Positives = 81/214 (37%), Gaps = 23/214 (10%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90
F L +G L + R Y+ D +LK F+ Y + + + E +
Sbjct: 37 IYNDGFIQDLLAGKLSNQAVRQYLRADASYLKEFTNIYAMLIPKMSSMEDVKFLVEQIEF 96
Query: 91 VLE-ELKMHDSFVKEWG---TDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATP 146
+LE E++ H+ ++ K + Y + + A
Sbjct: 97 MLEGEVEAHEVLADFINEPYEEIVKEKVWPPSGDHYIKHMYFNAF--------------- 141
Query: 147 FEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN 206
+ AA+T+ AM+PC +YA +GK N+ +KW YS+E
Sbjct: 142 --ARENAAFTIAAMAPCPYVYAVIGKRAMEDPKLNK-ESVTSKWFQFYSTE-MDELVDVF 197
Query: 207 EDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+ L+D+L+ + E I++ + Q+ E FF
Sbjct: 198 DQLMDRLTKHCSETEKKEIKENFLQSTIHERHFF 231
|
| >1udd_A Transcriptional regulator; helix-bundle, lipid binding protein; 2.15A {Pyrococcus horikoshii} SCOP: a.132.1.3 Length = 226 | Back alignment and structure |
|---|
Score = 133 bits (335), Expect = 5e-36
Identities = 47/212 (22%), Positives = 75/212 (35%), Gaps = 25/212 (11%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90
PF V L SG L LE F+ Y+ QDF++L ++A + A+ I R
Sbjct: 20 IFEHPFVVQLYSGTLPLEKFKFYVLQDFNYLVGLTRALAVISSKAEYPLMAELIELARDE 79
Query: 91 VLEELKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPFE 148
V E++ + +KE L Y +F+LATA
Sbjct: 80 VTVEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATA------------------ 121
Query: 149 KTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNED 208
L A+ PC YA + + L N Y +W Y S + +
Sbjct: 122 YKGNIIEGLTALLPCFWSYAEIAEYHKDKLRDNP-IKIYREWGKVYLSNEYLNLVGRLRK 180
Query: 209 LLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
++D D + +++ K E+ F+
Sbjct: 181 IIDSSGH----SGYDRLRRIFITGSKFELAFW 208
|
| >2qzc_A Transcriptional activator TENA-1; heme oxygenase-like fold, structural genomics, joint center structural genomics, JCSG; 1.50A {Sulfolobus solfataricus P2} Length = 214 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 5e-36
Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 32/212 (15%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90
+ F + + G+L L+ FR+Y+ QD +++ +A +A D ++ +
Sbjct: 22 YVKHEFILKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKGPIDKVTKILNLVFSS 81
Query: 91 VLEELKMHDSFVKEWGTDLAKM--ATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFE 148
+ L+ H + + N YT L A+
Sbjct: 82 RDKGLETHGKLYSKLDISRDVIVKTGYNLINYAYTRHLYYYANLDW-------------- 127
Query: 149 KTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNED 208
L A +PCM Y+ +G + N Y W Y+S ++
Sbjct: 128 -----NKFLVAWTPCMFGYSIVGDYVI-----DSPNEVYKTWASFYASTEYKKRIEAILY 177
Query: 209 LLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
LD++S + + ++ +++ E+ F+
Sbjct: 178 ALDEVS------ITEDLLNIFINSVRFEIGFW 203
|
| >3mvu_A TENA family transcriptional regulator; TENA/THI-4/PQQC family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} Length = 226 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 6e-35
Identities = 51/219 (23%), Positives = 83/219 (37%), Gaps = 31/219 (14%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90
+ F L +G L E F HY+ QD+ FL FS+A+ LA ++ L+
Sbjct: 24 YTHHAFVEGLKAGTLPREAFLHYLQQDYVFLIHFSRAWALAVVKSETHSEMLAAVGTVNA 83
Query: 91 VL-EELKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPF 147
++ EE+++H + G + + + YT F+L
Sbjct: 84 LVAEEMQLHIGICEASGISQEALFATRERAENLAYTRFVLEAG----------------- 126
Query: 148 EKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNE 207
+ L A++PC+ Y E L A + Y WID Y + +QA+
Sbjct: 127 -YSGDLLDLLAALAPCVMGYG----EIGKRLTAEATSTLYGDWIDTYGGDDYQAACKAVG 181
Query: 208 DLLDKLSVSLTG------EELDIIEKLYHQAMKLEVEFF 240
LLD G + + +H A +LEV F+
Sbjct: 182 TLLDDALERRLGAEFTSSPRWSRLCQTFHTATELEVGFW 220
|
| >1z72_A Transcriptional regulator, putative; structu genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 1.45A {Streptococcus pneumoniae} SCOP: a.132.1.3 PDB: 2a6b_A Length = 225 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 7e-32
Identities = 40/241 (16%), Positives = 88/241 (36%), Gaps = 27/241 (11%)
Query: 3 AIPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLK 62
A+ + + + L +++ A+ F L +G ++ + + Y+ QD+HF
Sbjct: 3 AMETQDYAFQPGLTVGELLKSSQKDWQAAINHRFVKELFAGTIENKVLKDYLIQDYHFFD 62
Query: 63 AFSQAYELAEECADDDDAKLSISELRKGVLEE-LKMHDSFVKEWGTDLAKMATV--NSAT 119
AF AD ++KL ++ + + KE V + T
Sbjct: 63 AFLSMLGACVAHADKLESKLRFAKQLGFLEADEDGYFQKAFKELKVAENDYLEVTLHPVT 122
Query: 120 VKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLN 179
+ + + + + A+ L + LY G +
Sbjct: 123 KAFQDLMYSAV------------------ASSDYAHLLVMLVIAEGLYLDWGSK----DL 160
Query: 180 ANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEF 239
A + +++WI+ + F D L+++ + E+L +++ ++QA+ LE+ F
Sbjct: 161 ALPEVYIHSEWINLHRGPFFAEWVQFLVDELNRVGKNR--EDLTELQQRWNQAVALELAF 218
Query: 240 F 240
F
Sbjct: 219 F 219
|
| >3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} Length = 550 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 1e-29
Identities = 40/213 (18%), Positives = 87/213 (40%), Gaps = 23/213 (10%)
Query: 32 MYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV 91
+ F +A G L+ + F+ +I QD+ +L +++ + +A A + + GV
Sbjct: 350 INHEFVKKVADGTLERKKFQFFIEQDYAYLVDYARVHCIAGSKAPCLEDMEKELVIVGGV 409
Query: 92 LEELKMHDSFVKE----WGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPF 147
E+ H+ +KE D + A Y+ + + +
Sbjct: 410 RTEMGQHEKRLKEVFGVKDPDYFQKIKRGPALRAYSRYFNDVSRRG------------NW 457
Query: 148 EKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNE 207
++ + ++PC+ Y + + A EG Y +W + Y+S ++ + + E
Sbjct: 458 QELVAS------LTPCLMGYGEALTKMKGKVTAPEG-SVYHEWCETYASSWYREAMDEGE 510
Query: 208 DLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
LL+ + + E+LD + +Y + +LE F+
Sbjct: 511 KLLNHILETYPPEQLDTLVTIYAEVCELETNFW 543
|
| >1wwm_A Hypothetical protein TT2028; TENA/THI-4 family, putative transctiption activator, structu genomics; 2.61A {Thermus thermophilus} SCOP: a.132.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 78.2 bits (192), Expect = 6e-17
Identities = 30/198 (15%), Positives = 55/198 (27%), Gaps = 35/198 (17%)
Query: 43 GNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFV 102
L E FR ++ QD+ F++A + A + + + +EEL
Sbjct: 24 LRLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQA-HRAPLVQALMATVEELDWL---- 78
Query: 103 KEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSP 162
G + A V+ Y L Y +
Sbjct: 79 LLQGASPS--APVHPVRAGYIALLEEMGRLPYA-------------------YRVVFFYF 117
Query: 163 CMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEEL 222
L+ A + P+ + ++ + FQA E L L L E +
Sbjct: 118 LNGLF------LEAWAHHVPEEGPWAELSQHWFAPEFQAVLYDLEVLARGLWEDLDPEVV 171
Query: 223 DIIEKLYHQAMKLEVEFF 240
+ ++ E +
Sbjct: 172 ---RTYLRRILEAEKATW 186
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 66.8 bits (162), Expect = 1e-11
Identities = 91/604 (15%), Positives = 166/604 (27%), Gaps = 192/604 (31%)
Query: 7 KSPSPEEEGLARRL-WI-KFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAF 64
S RL W K+E + + + ++ FL +
Sbjct: 56 MSKDAVSG--TLRLFWTLLSKQEEMVQKF----------------VEEVLRINYKFLMS- 96
Query: 65 SQAYELAEECADDDDAKLSISELRKGVLEELKMH---DSFVKEWGTDLAKMATVNSATVK 121
+ E E R +++ F K + L + A
Sbjct: 97 ----PIKTEQRQPSMMTRMYIEQRD------RLYNDNQVFAKYNVSRLQPYLKLRQA--- 143
Query: 122 YTEFLLATASGK---VEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALL 178
LL K ++GV G G KT VA + +
Sbjct: 144 ----LLELRPAKNVLIDGVLGSG-------KTWVALDVC---------------LSYKVQ 177
Query: 179 NANEGN-HPYTKWID--NYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKL 235
+ W++ N +S LQ LL ++ + T D + + +
Sbjct: 178 CKMDFKIF----WLNLKNCNSPETVLEMLQK--LLYQIDPNWT-SRSDHSSNIKLRIHSI 230
Query: 236 EVE---FFCAQPLAQPTVVPLIKGHNPAGDRLIIFSD---------FDLTCTIV----DS 279
+ E ++P + L++ + F+L+C I+
Sbjct: 231 QAELRRLLKSKPYE---------------NCLLVLLNVQNAKAWNAFNLSCKILLTTRFK 275
Query: 280 SAILAEIAIVTAPKSDQNQPENQLGRMSSG-ELRNTWGLLSKQYTEEYEQCIESFMPSEK 338
A T S L S LL K Y C +P E
Sbjct: 276 QVTDFLSAATTTHIS--------LDHHSMTLTPDEVKSLLLK-----YLDCRPQDLPREV 322
Query: 339 VENFNYETLHKAL--EQLSHFEKRAN----------SRVIESGVLKGINLEDIKKAGERL 386
+ ++ E + + + +IES L + + +K +RL
Sbjct: 323 LTTN---PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS-LNVLEPAEYRKMFDRL 378
Query: 387 SLQDGCTTFFQKVVKNENLNANV--HVLSYCWCG------DLIRASFSSAGLNALNVHAN 438
S+ F +A++ +LS W ++ L +
Sbjct: 379 SV-------FPP-------SAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL--VEKQPK 422
Query: 439 EFSFKESISTGEIIEKVESPIDKVQAFNNTL-EKYGTDRK---------NLSVYIGDSVG 488
E +IS I +++ ++ A + ++ + Y + L Y +G
Sbjct: 423 ES----TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG 478
Query: 489 DLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGIL 548
L +E + R V F F+ +QK S+ W IL
Sbjct: 479 HHLKNIEHP-----ERMTLFRMVFLDFR--FL--------EQK--IRHDSTAWNASGSIL 521
Query: 549 YTVS 552
T+
Sbjct: 522 NTLQ 525
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 3e-05
Identities = 53/403 (13%), Positives = 108/403 (26%), Gaps = 105/403 (26%)
Query: 175 HALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMK 234
H E + Y + + ++F + +D+ D L+ EE+D I
Sbjct: 6 HMDFETGEHQYQYKDILSVFE-DAFVDN-FDCKDVQDMPKSILSKEEIDHI--------- 54
Query: 235 LEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKS 294
++ +G + F +
Sbjct: 55 ------------------IMSKDAVSGTLRL----FWTLLS------------------- 73
Query: 295 DQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQL 354
+ E + + LR + L E Q PS + + L
Sbjct: 74 ---KQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ------PSMMTRMYIEQ--RDRLYND 122
Query: 355 SH-FEKRANSRVIESGVLKGINLEDIKKAGERLSLQ--DGC--TTFFQKVVKNE----NL 405
+ F K SR+ L+ L +++ A + + + G T V + +
Sbjct: 123 NQVFAKYNVSRLQPYLKLR-QALLELRPA-KNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180
Query: 406 NANVHVLS--YCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463
+ + L+ C + + L L + S + ++ I +Q
Sbjct: 181 DFKIFWLNLKNCNSPETVLEM-----LQKLLYQID----PNWTSRSDHSSNIKLRIHSIQ 231
Query: 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA-DIG---IVIGSSSSLRRVGSQFGVTF 519
A L K +N + + +V + A ++ ++ + S T
Sbjct: 232 AELRRLLKS-KPYEN-CLLVLLNVQNAKA-WNAFNLSCKILLTTRFKQVTDFLSAATTTH 288
Query: 520 IPLYPGLVKKQKEYTEGSSSNWKEKSGILYTVSSWAEVHAFIL 562
I L T E +L + + L
Sbjct: 289 IS----LDHHSMTLTP------DEVKSLL---LKYLDCRPQDL 318
|
| >1rcw_A CT610, CADD; iron, DI-iron, redox enzyme, metallo enzyme, oxidoreductase,; 2.50A {Chlamydia trachomatis} SCOP: a.132.1.4 Length = 231 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 1e-07
Identities = 27/215 (12%), Positives = 56/215 (26%), Gaps = 33/215 (15%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLS----ISELRKG 90
F V + G L E + Y + +KAF + DD +A+ + + G
Sbjct: 25 TFYVKWSKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDDLEARKLLLDNLMDEENG 84
Query: 91 VLEELKMHDSFVKEWGTDLAKMAT--VNSATVKYTEFLLATASGKVEGVKGPGKLATPFE 148
+ + FV G ++ + A + +
Sbjct: 85 YPNHIDLWKQFVFALGVTPEELEAHEPSEAAKAKVATFMR------------------WC 126
Query: 149 KTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNED 208
A + A+ + +E G Y + + F +
Sbjct: 127 TGDSLAAGVAALYSYESQIPRIAREKI------RGLTEYFGFSNPEDYAYFTEHEEADVR 180
Query: 209 ---LLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
L L ++ D + + + + F
Sbjct: 181 HAREEKALIEMLLKDDADKVLEASQEVTQSLYGFL 215
|
| >2g09_A Cytosolic 5'-nucleotidase III; uniprot Q9D020, UMPH-1, pyrim nucleotidase 1, P5N-1, NT5C3 protein, AAH38029, BC038029, M LEAD poisoning; HET: PIN; 2.10A {Mus musculus} PDB: 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A Length = 297 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 3e-07
Identities = 42/233 (18%), Positives = 84/233 (36%), Gaps = 35/233 (15%)
Query: 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQ 321
+L I +DFD+T + + N + + + L++ +
Sbjct: 42 AKLQIITDFDMTLS-----------------RFSYNGKRCP----TCHNIIDNCKLVTDE 80
Query: 322 YTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKK 381
+ Q E + E E + + + +++ +IE G+ K E +
Sbjct: 81 CRRKLLQLKEQYYAIEVDPVLTVEEKFPYMVE---WYTKSHGLLIEQGIPKAKLKEIVAD 137
Query: 382 AGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVH--ANE 439
+ + L++G FF K+ + V + S GD++ AG+ NV +N
Sbjct: 138 SD--VMLKEGYENFFGKL---QQHGIPVFIFSAGI-GDVLEEVIRQAGVYHSNVKVVSNF 191
Query: 440 FSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT--DRKNLSVYIGDSVGDL 490
F E+ ++ +K + + D N+ + +GDS GDL
Sbjct: 192 MDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNI-ILLGDSQGDL 243
|
| >3oql_A TENA homolog; transcriptional activator, structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.54A {Pseudomonas syringae PV} Length = 262 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 5e-07
Identities = 13/123 (10%), Positives = 33/123 (26%), Gaps = 8/123 (6%)
Query: 17 ARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELA----- 71
A++L + + L + R Y+ + ++ F+
Sbjct: 22 AQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTR 81
Query: 72 -EECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKM--ATVNSATVKYTEFLLA 128
+D A+ + + L ++ L + V + +
Sbjct: 82 FGRHPGEDMARRWLMRNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQ 141
Query: 129 TAS 131
T+S
Sbjct: 142 TSS 144
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 2e-06
Identities = 27/241 (11%), Positives = 64/241 (26%), Gaps = 63/241 (26%)
Query: 263 RLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQY 322
+ I DFD T T+ D+ + +
Sbjct: 6 KPFIICDFDGTITMNDNIINIMK----------------TFAP----------------- 32
Query: 323 TEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDI-KK 381
E+ + + ++ + + + G+L E+I
Sbjct: 33 -PEWMALKDGVLSKTL-------SIKEGVGR----------MF---GLLPSSLKEEITSF 71
Query: 382 AGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFS 441
E +++G F + ++ +V+S + ++ N S
Sbjct: 72 VLEDAKIREGFREFVAFINEH---EIPFYVIS-GGMDFFVYPLLEGIVEK-DRIYCNHAS 126
Query: 442 FKESISTGEIIEKVESPIDKVQAFN--NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499
F + + + + + + + + IGDSV D+ +D+
Sbjct: 127 FDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYI-IMIGDSVTDVEAAKLSDLC 185
Query: 500 I 500
Sbjct: 186 F 186
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 4e-06
Identities = 28/146 (19%), Positives = 46/146 (31%), Gaps = 14/146 (9%)
Query: 357 FEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLS--Y 414
F K RV LK + L+ K+ E L L +G + + N V S +
Sbjct: 48 FHKSLILRV---SKLKNMPLKLAKEVCESLPLFEGALELVSALKEK---NYKVVCFSGGF 101
Query: 415 CWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 474
+ R L+ +N + G + + K +
Sbjct: 102 DLATNHYRDL-----LHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQRLLNI 156
Query: 475 DRKNLSVYIGDSVGDLLCLLEADIGI 500
+ N ++ +GD DL A I I
Sbjct: 157 SKTN-TLVVGDGANDLSMFKHAHIKI 181
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 8e-06
Identities = 30/146 (20%), Positives = 51/146 (34%), Gaps = 14/146 (9%)
Query: 357 FEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLS--Y 414
F + RV L G+ I + +L L G T + + + V+S +
Sbjct: 229 FAQSLQQRV---ATLAGLPATVIDEVAGQLELMPGARTTLRTLRRL---GYACGVVSGGF 282
Query: 415 CWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 474
+ + L V ANE + TG ++ + K A ++ G
Sbjct: 283 RRIIEPLAEE-----LMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRAGV 337
Query: 475 DRKNLSVYIGDSVGDLLCLLEADIGI 500
+V +GD D+ L A +GI
Sbjct: 338 PMAQ-TVAVGDGANDIDMLAAAGLGI 362
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 14/146 (9%)
Query: 357 FEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLS--Y 414
FE+ RV +LK + +E ++KA +R++ +G +++ V V+S +
Sbjct: 49 FEQSLRKRV---SLLKDLPIEKVEKAIKRITPTEGAEETIKELKNR---GYVVAVVSGGF 102
Query: 415 CWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 474
+ I+ GL+ AN K+ TG++ +V K + + G
Sbjct: 103 DIAVNKIKEKL---GLDY--AFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGI 157
Query: 475 DRKNLSVYIGDSVGDLLCLLEADIGI 500
+ ++ +V +GD D+ +A + I
Sbjct: 158 NLED-TVAVGDGANDISMFKKAGLKI 182
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 5e-05
Identities = 28/145 (19%), Positives = 49/145 (33%), Gaps = 12/145 (8%)
Query: 357 FEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCW 416
F R+ G+LKG + +R++L G T + ++S
Sbjct: 152 FNASFTRRI---GMLKGTPKAVLNAVCDRMTLSPGLLTILPVIKAK---GFKTAIIS--- 202
Query: 417 CGDLIR-ASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 475
G L A +N ++++ T I + + +K Q + +
Sbjct: 203 -GGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARLNIA 261
Query: 476 RKNLSVYIGDSVGDLLCLLEADIGI 500
+N + GD DL L A GI
Sbjct: 262 TEN-IIACGDGANDLPMLEHAGTGI 285
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 7e-05
Identities = 26/139 (18%), Positives = 50/139 (35%), Gaps = 14/139 (10%)
Query: 364 RVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLS--YCWCGDLI 421
RV LK + + + E L L + V + S + + D +
Sbjct: 158 RV---SKLKDAPEQILSQVRETLPLMPELPELVATL---HAFGWKVAIASGGFTYFSDYL 211
Query: 422 RASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSV 481
+ L+ +N TG+++ +V S K ++Y + N +V
Sbjct: 212 KEQ-----LSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQYDVEIHN-TV 265
Query: 482 YIGDSVGDLLCLLEADIGI 500
+GD DL+ + A +G+
Sbjct: 266 AVGDGANDLVMMAAAGLGV 284
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 564 | |||
| 3no6_A | 248 | Transcriptional activator TENA; structural genomic | 100.0 | |
| 3mvu_A | 226 | TENA family transcriptional regulator; TENA/THI-4/ | 100.0 | |
| 3ibx_A | 221 | TENA, HP1287, putative thiaminase II; vitamin B1, | 100.0 | |
| 4fn6_A | 229 | Thiaminase-2, thiaminase II; alpha-helix, vitamin | 100.0 | |
| 2qcx_A | 263 | Transcriptional activator TENA; UP-DOWN bundle, hy | 100.0 | |
| 1z72_A | 225 | Transcriptional regulator, putative; structu genom | 100.0 | |
| 1rtw_A | 220 | Transcriptional activator, putative; PF1337, TENA, | 100.0 | |
| 2f2g_A | 221 | SEED maturation protein PM36 homolog; TENA_THI-4 d | 100.0 | |
| 2gm8_A | 221 | TENA homolog/THI-4 thiaminase; transcription, tran | 100.0 | |
| 1udd_A | 226 | Transcriptional regulator; helix-bundle, lipid bin | 100.0 | |
| 3rm5_A | 550 | Hydroxymethylpyrimidine/phosphomethylpyrimidine K | 100.0 | |
| 2qzc_A | 214 | Transcriptional activator TENA-1; heme oxygenase-l | 100.0 | |
| 2a2m_A | 258 | Hypothetical protein BT3146; putative TENA family | 100.0 | |
| 1wwm_A | 190 | Hypothetical protein TT2028; TENA/THI-4 family, pu | 100.0 | |
| 3oql_A | 262 | TENA homolog; transcriptional activator, structura | 100.0 | |
| 1rcw_A | 231 | CT610, CADD; iron, DI-iron, redox enzyme, metallo | 99.96 | |
| 3dde_A | 239 | TENA/THI-4 protein, domain of unknown function WI | 99.92 | |
| 3hlx_A | 258 | Pyrroloquinoline-quinone synthase; PQQC, PQQ biosy | 99.91 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.87 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.86 | |
| 3bjd_A | 332 | Putative 3-oxoacyl-(acyl-carrier-protein) synthas; | 99.81 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.76 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.75 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 99.73 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.72 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.65 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.6 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.56 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.56 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.44 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 99.42 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.32 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.3 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.16 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.14 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.14 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.14 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.12 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.09 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.07 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.06 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.06 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.05 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.04 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.03 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.03 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.03 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.02 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.01 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.99 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.96 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.96 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.96 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.94 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.93 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 98.93 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.92 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.92 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.9 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.9 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.89 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.89 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.88 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.88 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 98.88 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.86 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.85 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.84 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.83 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 98.82 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.82 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.81 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 98.79 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.78 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.77 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.77 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.77 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.76 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.75 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.74 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.73 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.71 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.71 | |
| 3b5o_A | 244 | CADD-like protein of unknown function; structural | 98.7 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 98.69 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 98.68 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.67 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.67 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.65 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 98.58 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.58 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 97.98 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.49 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 98.46 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.46 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.45 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 98.44 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.42 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.41 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 98.39 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 98.38 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 98.36 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.36 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.32 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.32 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.29 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.27 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 98.25 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 98.25 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 98.25 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.23 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 98.2 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.19 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 98.19 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.18 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.18 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.14 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.14 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.13 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 98.12 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.08 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 98.07 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.06 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 98.03 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.02 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.01 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.0 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.99 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 97.96 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 97.95 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 97.91 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.89 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.88 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.84 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.82 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.66 | |
| 2q32_A | 264 | Heme oxygenase 2, HO-2; structural genomics medica | 97.57 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 97.51 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 97.48 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 97.48 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 97.48 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.46 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 97.43 | |
| 1wov_A | 250 | Heme oxygenase 2; HOMO dimer, oxidoreductase; HET: | 97.36 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 97.35 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.32 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 97.31 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.13 | |
| 1j02_A | 267 | Heme oxygenase 1; alpha helix, O2-analog bound for | 97.11 | |
| 1we1_A | 240 | Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A | 97.1 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.05 | |
| 1n45_A | 233 | Heme oxygenase 1, HO-1; alpha helices, heme-bindin | 97.03 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 96.96 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 96.95 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 96.94 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 96.93 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 96.86 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 96.83 | |
| 1wzd_A | 215 | Heme oxygenase; electron-transfer, artificial meta | 96.81 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 96.78 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 96.77 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 96.65 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 96.61 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 96.53 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 96.43 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.28 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.95 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 95.82 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 95.11 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 95.02 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 94.61 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 94.33 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 93.87 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 92.22 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 92.02 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 87.12 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 86.98 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 86.47 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 86.25 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 84.55 |
| >3no6_A Transcriptional activator TENA; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.65A {Staphylococcus epidermidis} SCOP: a.132.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-48 Score=383.46 Aligned_cols=220 Identities=20% Similarity=0.241 Sum_probs=201.2
Q ss_pred CcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 008479 12 EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV 91 (564)
Q Consensus 12 ~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i 91 (564)
..++|+++||++..+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.+++..+...+..+
T Consensus 18 ~~~~ft~~L~~~~~~~w~~~~~HPFv~~L~~GtL~~e~F~~YL~QD~~YL~~far~~a~a~aka~~~~~~~~~~~~~~~~ 97 (248)
T 3no6_A 18 QGMTFSKELREASRPIIDDIYNDGFIQDLLAGKLSNQAVRQYLRADASYLKEFTNIYAMLIPKMSSMEDVKFLVEQIEFM 97 (248)
T ss_dssp TTBCHHHHHHHHHHHHHHHHHHSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHhCHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred H-HHHHHHHHHHHHhCCCcc---cccCCChhHHHHHHHHHHHhcC-CCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHH
Q 008479 92 L-EELKMHDSFVKEWGTDLA---KMATVNSATVKYTEFLLATASG-KVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRL 166 (564)
Q Consensus 92 ~-~E~~~h~~~~~~~gi~~~---~~~~~~pa~~~Y~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~ 166 (564)
. +|+++|++++++|||+.+ ...+++|+|++||+||++++.. +. ++++++||+||+|+
T Consensus 98 ~~~E~~lh~~~~~~~gi~~~~~~~~~~~~p~~~aYt~~ll~~a~~~g~------------------~~~~laAl~PC~w~ 159 (248)
T 3no6_A 98 LEGEVEAHEVLADFINEPYEEIVKEKVWPPSGDHYIKHMYFNAFAREN------------------AAFTIAAMAPCPYV 159 (248)
T ss_dssp HTCCCHHHHHHHHHTTSCHHHHCCSCCCCHHHHHHHHHHHHHHHHCSS------------------THHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHhhhcCCCHHHHHHHHHHHHHHhcCCC------------------HHHHHHHHHHHHHH
Confidence 5 699999999999999976 3468899999999999999953 32 36899999999999
Q ss_pred HHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 008479 167 YAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLA 246 (564)
Q Consensus 167 Y~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a~~~ 246 (564)
|++||+++..... ..++++|++||++|+ ++|.+.|.+++++||++++.++++++++|+++|+++|++|++|||++ ++
T Consensus 160 Y~eig~~l~~~~~-~~~~~~Y~~WI~~Y~-~ef~~~v~~~~~~ld~~~~~~s~~~~~~l~~~F~~a~~lE~~Fwd~a-y~ 236 (248)
T 3no6_A 160 YAVIGKRAMEDPK-LNKESVTSKWFQFYS-TEMDELVDVFDQLMDRLTKHCSETEKKEIKENFLQSTIHERHFFNMA-YI 236 (248)
T ss_dssp HHHHHHHHHHCTT-CCTTSTTHHHHHHHH-HHTHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHhcCC-CCCCchHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-hh
Confidence 9999999987542 225789999999999 99999999999999999999999999999999999999999999999 77
Q ss_pred CCccccc
Q 008479 247 QPTVVPL 253 (564)
Q Consensus 247 ~~~~~p~ 253 (564)
+.+ ||+
T Consensus 237 ~e~-W~~ 242 (248)
T 3no6_A 237 NEK-WEY 242 (248)
T ss_dssp TCC-CCC
T ss_pred hcc-CCC
Confidence 665 554
|
| >3mvu_A TENA family transcriptional regulator; TENA/THI-4/PQQC family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} SCOP: a.132.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-47 Score=373.36 Aligned_cols=210 Identities=24% Similarity=0.376 Sum_probs=196.7
Q ss_pred CCcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 008479 11 PEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90 (564)
Q Consensus 11 ~~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~ 90 (564)
+|.++|+++||++..+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.+++.++...+..
T Consensus 4 ~p~g~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~~~~~~~~~~~~~~ 83 (226)
T 3mvu_A 4 EPYGKAFSLMRAEAEPAWRAYTHHAFVEGLKAGTLPREAFLHYLQQDYVFLIHFSRAWALAVVKSETHSEMLAAVGTVNA 83 (226)
T ss_dssp STTCHHHHHHHHHTTTHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHhCHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHH-HHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHH
Q 008479 91 VLE-ELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRL 166 (564)
Q Consensus 91 i~~-E~~~h~~~~~~~gi~~~~--~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~ 166 (564)
+.+ |+++|+.+++.+|++.++ ..+++|+|.+|++||++++. ++ ++++++||+||+|+
T Consensus 84 ~~~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~~~aY~~~l~~~a~~~~-------------------~~~~~aAl~pc~~~ 144 (226)
T 3mvu_A 84 LVAEEMQLHIGICEASGISQEALFATRERAENLAYTRFVLEAGYSGD-------------------LLDLLAALAPCVMG 144 (226)
T ss_dssp HHTTHHHHHHHHHHHTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHhhCCCCHHHHHHHHHHHHHHhcCC-------------------HHHHHHHHHHHHHH
Confidence 875 999999999999999763 56899999999999999995 54 47899999999999
Q ss_pred HHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHH-----HHhc-cCCHHHHHHHHHHHHHHHHHHHHhh
Q 008479 167 YAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLD-----KLSV-SLTGEELDIIEKLYHQAMKLEVEFF 240 (564)
Q Consensus 167 Y~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld-----~~~~-~~~~~~~~~~~~~F~~~~~lE~~Fw 240 (564)
|.+||+++.... ++|+|++||++|+|++|.+.|.+++++|| +++. .++++++++|+++|+++|++|++||
T Consensus 145 Y~~ig~~l~~~~----~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~F~~a~~lE~~Fw 220 (226)
T 3mvu_A 145 YGEIGKRLTAEA----TSTLYGDWIDTYGGDDYQAACKAVGTLLDDALERRLGAEFTSSPRWSRLCQTFHTATELEVGFW 220 (226)
T ss_dssp HHHHHHHHHHHC----SCSTTHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHCTTGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC----CCCcchHHHHHcCCHHHHHHHHHHHHHHCchhHHHHhhhccChHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998752 37899999999999999999999999999 9887 7788999999999999999999999
Q ss_pred ccC
Q 008479 241 CAQ 243 (564)
Q Consensus 241 ~~a 243 (564)
||+
T Consensus 221 d~a 223 (226)
T 3mvu_A 221 QMG 223 (226)
T ss_dssp HHH
T ss_pred Hhh
Confidence 998
|
| >3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrol; 2.40A {Helicobacter pylori} PDB: 2rd3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-47 Score=373.59 Aligned_cols=213 Identities=23% Similarity=0.395 Sum_probs=197.7
Q ss_pred CCcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 008479 11 PEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90 (564)
Q Consensus 11 ~~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~ 90 (564)
|.+|+|+++||++..+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.+++.++...+..
T Consensus 2 ~~~M~f~~~L~~~~~~~~~~~~~HPFv~~l~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~~~~~~~~~~~~~~ 81 (221)
T 3ibx_A 2 PFTMQVSQYLYQNAQSIWGDCISHPFVQGIGRGTLERDKFRFYIIQDYLYLLEYAKVFALGVVKACDEAVMREFSNAIQD 81 (221)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHTSHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHhhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred HH-HHHHHHHHHHHHhCCCcc--cccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHH
Q 008479 91 VL-EELKMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRL 166 (564)
Q Consensus 91 i~-~E~~~h~~~~~~~gi~~~--~~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~ 166 (564)
+. +|+++|+.+++.+|++.+ ...+++|+|.+|++||++++. |+ ++++++||+||+|+
T Consensus 82 ~~~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~~~aY~~~l~~~a~~~~-------------------~~~~~aAl~pc~~~ 142 (221)
T 3ibx_A 82 ILNNEMSIHNHYIRELQITQKELQNACPTLANKSYTSYMLAEGFKGS-------------------IKEVAAAVLSCGWS 142 (221)
T ss_dssp HHSCTTSHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHhhccCCHHHHHHHHHHHHHHhcCC-------------------HHHHHHHHHHHHHH
Confidence 75 599999999999999976 357899999999999999996 44 47899999999999
Q ss_pred HHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 167 YAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 167 Y~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
|.+||+++..... ..++|+|++||++|+|++|.+.|.+++++||+++..++++++++|+++|+++|++|++|||++
T Consensus 143 Y~~ig~~l~~~~~-~~~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~F~~a~~lE~~Fwd~a 218 (221)
T 3ibx_A 143 YLVIAQNLSQIPN-ALEHAFYGHWIKGYSSKEFQACVNWNINLLDSLTLASSKQEIEKLKEIFITTSEYEYLFWDMA 218 (221)
T ss_dssp HHHHHHHHTCSSS-TTTCTTTHHHHHHTTSHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCC-CCCCChHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999976432 135799999999999999999999999999999998999999999999999999999999998
|
| >4fn6_A Thiaminase-2, thiaminase II; alpha-helix, vitamin B1, BI-functional enzyme, C of thiamine INTO HMP and THZ; HET: CME; 2.69A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-47 Score=372.17 Aligned_cols=218 Identities=22% Similarity=0.318 Sum_probs=199.6
Q ss_pred chHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-
Q 008479 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVL- 92 (564)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i~- 92 (564)
|+|+++||++..+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.+++.++...+..+.
T Consensus 1 M~ft~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~~~r~~a~~~aka~~~~~~~~~~~~~~~~~~ 80 (229)
T 4fn6_A 1 MEFSQKLYQAAKPIINDIYEDDFIQKMLLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVE 80 (229)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSHHHHHHHHTCCCHHHHHHHHHHHHHTHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHS
T ss_pred CcHHHHHHHhHHHHHHHHHCChHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999988875
Q ss_pred HHHHHHHHHHHHhCCCcc---cccCCChhHHHHHHHHHHHhcC-CCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHH
Q 008479 93 EELKMHDSFVKEWGTDLA---KMATVNSATVKYTEFLLATASG-KVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYA 168 (564)
Q Consensus 93 ~E~~~h~~~~~~~gi~~~---~~~~~~pa~~~Y~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~ 168 (564)
+|+++|+.+++.+|++.+ ...+++|+|.+|++||++++.. +. ++++++||+||+|+|+
T Consensus 81 ~E~~~h~~~~~~~gi~~~~~~~~~~~~p~~~aY~~~l~~~a~~~~~------------------~~~~~aAl~pC~~~Y~ 142 (229)
T 4fn6_A 81 GEVLAHDILAQIVGESYEEIIKTKVWPPSGDHYIKHMYFQAHSREN------------------AIYTIAAMAPCPYIYA 142 (229)
T ss_dssp CCCHHHHHHHHHHTSCHHHHHHSCCCCHHHHHHHHHHHHHHHHCCS------------------HHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHhhhcCCCHHHHHHHHHHHHHHhhcCC------------------HHHHHHHHHHHHHHHH
Confidence 699999999999999976 3468999999999999999853 33 4799999999999999
Q ss_pred HHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 008479 169 FLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQP 248 (564)
Q Consensus 169 ~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a~~~~~ 248 (564)
+||+++..... ..++|+|++||++|+ ++|.+.|.+++++||++++.++++++++|+++|+++|++|++|||++ +++.
T Consensus 143 ~ig~~l~~~~~-~~~~~~y~~WI~~y~-~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~F~~a~~lE~~Fwd~a-~~~~ 219 (229)
T 4fn6_A 143 ELAKRSQSDHK-LNREKDTAKWFDFYS-TEMDDIINVFESLMNKLAESMSDKELEQVKQVFLESCIHERRFFNMA-MTLE 219 (229)
T ss_dssp HHHHHHHTCTT-CCTTSTHHHHHHHHT-TTTHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHH-HTTC
T ss_pred HHHHHHHHcCC-CCCCChHHHHHHHHh-HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-hhcc
Confidence 99999987532 125789999999999 99999999999999999999999999999999999999999999999 7766
Q ss_pred ccccc
Q 008479 249 TVVPL 253 (564)
Q Consensus 249 ~~~p~ 253 (564)
+ ||+
T Consensus 220 ~-w~~ 223 (229)
T 4fn6_A 220 Q-WEF 223 (229)
T ss_dssp C-CCC
T ss_pred C-CCC
Confidence 5 554
|
| >2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET: PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A* 1to9_A* 1tyh_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-45 Score=364.57 Aligned_cols=218 Identities=18% Similarity=0.261 Sum_probs=199.8
Q ss_pred cchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 008479 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVL 92 (564)
Q Consensus 13 ~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i~ 92 (564)
-|+|+++||+...+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++++++.++...+..+.
T Consensus 27 mm~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~e~f~~YL~QDy~yL~~f~r~la~a~aka~~~~~~~~l~~~i~~~~ 106 (263)
T 2qcx_A 27 GMKFSEECRSAAAEWWEGSFVHPFVQGIGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKDLYTTGRMASHAQGTY 106 (263)
T ss_dssp CSSHHHHHHHHTHHHHHHHHTCHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999988765
Q ss_pred -HHHHHHHHHHHHhCCCcc--cccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHH
Q 008479 93 -EELKMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (564)
Q Consensus 93 -~E~~~h~~~~~~~gi~~~--~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (564)
+|+++|+++++.+|++.+ ...+|+|+|.+|++||++++..+. ++++++||+||+|+|.+
T Consensus 107 ~~E~~lh~~~~~~~Gi~~~~l~~~~~~pat~aYt~~l~~~a~~g~------------------~~~~laAl~pC~w~Y~~ 168 (263)
T 2qcx_A 107 EAEMALHREFAELLEISEEERKAFKPSPTAYSFTSHMYRSVLSGN------------------FAEILAALLPCYWLYYE 168 (263)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHSCCCCHHHHHHHHHHHHHHTTTC------------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHHhcCC------------------HHHHHHHHHHHHHHHHH
Confidence 599999999999999976 367899999999999999986332 47999999999999999
Q ss_pred HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCc
Q 008479 170 LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQPT 249 (564)
Q Consensus 170 i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a~~~~~~ 249 (564)
||+++.+... ++++|++||++|++++|.+.|.+++++||++++..+++++++|+++|+++|++|++|||++ ++..+
T Consensus 169 ig~~l~~~~~---~~~~Y~~WI~~y~~~df~~~v~~~~~lld~l~~~~s~~~~~~l~~~F~~a~~lE~~Fwd~a-~~~e~ 244 (263)
T 2qcx_A 169 VGEKLLHCDP---GHPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKENFVISSYYEYQFWGMA-YRKEG 244 (263)
T ss_dssp HHHHHTTCCC---CSHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCC
T ss_pred HHHHHHhccC---CCcHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-hcccC
Confidence 9999876432 4589999999999999999999999999999988899999999999999999999999999 66554
Q ss_pred cccc
Q 008479 250 VVPL 253 (564)
Q Consensus 250 ~~p~ 253 (564)
||+
T Consensus 245 -W~~ 247 (263)
T 2qcx_A 245 -WSD 247 (263)
T ss_dssp -SCC
T ss_pred -CCC
Confidence 554
|
| >1z72_A Transcriptional regulator, putative; structu genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 1.45A {Streptococcus pneumoniae} SCOP: a.132.1.3 PDB: 2a6b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-45 Score=356.77 Aligned_cols=216 Identities=18% Similarity=0.196 Sum_probs=194.7
Q ss_pred CCCCCCCCCCcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHH
Q 008479 3 AIPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKL 82 (564)
Q Consensus 3 ~~~~~~~~~~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~ 82 (564)
+|.|...+-+.++|+++||+...+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.+++.
T Consensus 3 ~~~~~~~~~~p~~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~~~~~~ 82 (225)
T 1z72_A 3 AMETQDYAFQPGLTVGELLKSSQKDWQAAINHRFVKELFAGTIENKVLKDYLIQDYHFFDAFLSMLGACVAHADKLESKL 82 (225)
T ss_dssp ----CCCSSCCHHHHHHHHHTTHHHHHHHHTCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHH
T ss_pred ccccCCCCCCChhHHHHHHHHhHHHHHHHHCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 46666667777999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHH
Q 008479 83 SISELRKGVL-EELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLG 158 (564)
Q Consensus 83 ~l~~~~~~i~-~E~~~h~~~~~~~gi~~~~--~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~ 158 (564)
++...+..+. +|+.+|+.+++.+|++.++ ..+++|+|.+|++||++++. |+ ++++++
T Consensus 83 ~~~~~~~~~~~~E~~~~~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~~~-------------------~~~~~a 143 (225)
T 1z72_A 83 RFAKQLGFLEADEDGYFQKAFKELKVAENDYLEVTLHPVTKAFQDLMYSAVASSD-------------------YAHLLV 143 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCTHHHHSCCCCHHHHHHHHHHHHHHHHTC-------------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhcCCCHHHHHHHHHHHHHHccCC-------------------HHHHHH
Confidence 9999888765 6999999999999999763 57899999999999999985 54 478999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Q 008479 159 AMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVE 238 (564)
Q Consensus 159 Al~pC~~~Y~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~ 238 (564)
||+||+|+|.+||++ ... .+++++|++||++|++++|.+.|.+++++||+++.. +++++ +|+++|+++|++|++
T Consensus 144 Al~pc~~~Y~~i~~~-~~~---~~~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~~~~-~~~~~-~~~~~f~~a~~lE~~ 217 (225)
T 1z72_A 144 MLVIAEGLYLDWGSK-DLA---LPEVYIHSEWINLHRGPFFAEWVQFLVDELNRVGKN-REDLT-ELQQRWNQAVALELA 217 (225)
T ss_dssp HHHHHHHHHHHHHTC-SSC---CCSSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHC--CCCHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-hcc---CCCcchHHHHHHHhCCHHHHHHHHHHHHHHHHHHcC-CHHHH-HHHHHHHHHHHHHHH
Confidence 999999999999988 432 235689999999999999999999999999999987 88888 999999999999999
Q ss_pred hhccC
Q 008479 239 FFCAQ 243 (564)
Q Consensus 239 Fw~~a 243 (564)
|||++
T Consensus 218 Fwd~a 222 (225)
T 1z72_A 218 FFDIG 222 (225)
T ss_dssp HTTTT
T ss_pred HHHHh
Confidence 99998
|
| >1rtw_A Transcriptional activator, putative; PF1337, TENA, thiamin, structural genomics, PSI, protein STR initiative; HET: MP5; 2.35A {Pyrococcus furiosus} SCOP: a.132.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-44 Score=348.53 Aligned_cols=207 Identities=21% Similarity=0.254 Sum_probs=189.2
Q ss_pred HHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHH---HHHHHHHHHHHH
Q 008479 16 LARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDA---KLSISELRKGVL 92 (564)
Q Consensus 16 ~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~---~~~l~~~~~~i~ 92 (564)
|++.||+...+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.++ +.++...+..+
T Consensus 2 f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~~~~l~~~~~~i- 80 (220)
T 1rtw_A 2 FSEELIKENENIWRRFLPHKFLIEMAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPDDLLPFFAESIYYISKEL- 80 (220)
T ss_dssp HHHHHHHHSHHHHGGGTTCHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHH-
T ss_pred hHHHHHHcCHHHHHHHHCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHH-
Confidence 78999999999999999999999999999999999999999999999999999999999999998 99999988887
Q ss_pred HHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHH
Q 008479 93 EELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLG 171 (564)
Q Consensus 93 ~E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~i~ 171 (564)
|+.+|+ ++.+|++. ..+|+|+|.+|++||++++. |+ ++++++||+||+|+|.+||
T Consensus 81 -E~~lh~--~~~~Gi~~--~~~~~p~t~aY~~~l~~~a~~~~-------------------~~~~laAl~pc~~~Y~~i~ 136 (220)
T 1rtw_A 81 -EMFEKK--AQELGISL--NGEIDWRAKSYVNYLLSVASLGS-------------------FLEGFTALYCEEKAYYEAW 136 (220)
T ss_dssp -HHHHHH--HHHTTCCS--SSCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHH--HHHCCCCC--CCCCCHHHHHHHHHHHHHHccCC-------------------HHHHHHHHHHHHHHHHHHH
Confidence 999999 89999998 57899999999999999985 54 4789999999999999999
Q ss_pred HHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCccc
Q 008479 172 KEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQPTVV 251 (564)
Q Consensus 172 ~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a~~~~~~~~ 251 (564)
+++.+... ++++|++||++|+|++|.+.|.++++++|++++..+++++++|+++|+++|++|++|||++ ++...|+
T Consensus 137 ~~l~~~~~---~~~~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~f~~a~~lE~~Fwd~a-~~~~~w~ 212 (220)
T 1rtw_A 137 KWVRENLK---ERSPYQEFINHWSSQEFGEYVKRIEKILNSLAEKHGEFEKERAREVFKEVSKFELIFWDIA-YGGEGNV 212 (220)
T ss_dssp HHHHHHCS---SCCTTHHHHHHHHSHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHT-C------
T ss_pred HHHHhccC---CCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHHH
Confidence 99987542 4589999999999999999999999999999988899999999999999999999999999 6665544
|
| >2f2g_A SEED maturation protein PM36 homolog; TENA_THI-4 domain, TENA/THI-4/PQQC family, AT3G16990, struct genomics, protein structure initiative; HET: HMH; 2.10A {Arabidopsis thaliana} SCOP: a.132.1.3 PDB: 2q4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=353.91 Aligned_cols=210 Identities=17% Similarity=0.201 Sum_probs=192.5
Q ss_pred cchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHH----HHHHHHHH
Q 008479 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDA----KLSISELR 88 (564)
Q Consensus 13 ~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~----~~~l~~~~ 88 (564)
+++|+++||+...+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.++ +.++...+
T Consensus 3 ~~~f~~~L~~~~~~~~~~~~~HpFv~~l~~GtL~~~~f~~yL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~~~~~l~~~~ 82 (221)
T 2f2g_A 3 KRGVIDTWIDKHRSIYTAATRHAFVVSIRDGSVDLSSFRTWLGQDYLFVRRFVPFVASVLIRACKDSGESSDMEVVLGGI 82 (221)
T ss_dssp --CHHHHHHHHTHHHHHHHTSCSCCCEEETTEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTHHHHHHHHH
T ss_pred CCcHHHHHHHhCHHHHHHHHCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHH
Confidence 56799999999999999999999999999999999999999999999999999999999999999888 89998888
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHH-hcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHH
Q 008479 89 KGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLAT-ASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY 167 (564)
Q Consensus 89 ~~i~~E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~-a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y 167 (564)
..+.+|+++|+++++.+|++. ...+++|+|.+|++||+++ +..+. ++++++||+||+|+|
T Consensus 83 ~~~~~E~~~h~~~~~~~Gi~~-~~~~~~p~~~aY~~~l~~~~~~~~~------------------~~~~~aAl~pc~~~Y 143 (221)
T 2f2g_A 83 ASLNDEIEWFKREGSKWDVDF-STVVPQRANQEYGRFLEDLMSSEVK------------------YPVIMTAFWAIEAVY 143 (221)
T ss_dssp HHHHHHHHHHHHHHHHTTCCG-GGCCCCHHHHHHHHHHHHTTSTTSC------------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCh-hhcCCCHHHHHHHHHHHHhhccCCC------------------HHHHHHHHHHHHHHH
Confidence 887779999999999999997 4578999999999999999 75332 478999999999999
Q ss_pred HHHHHHHHh--hccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 008479 168 AFLGKEFHA--LLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPL 245 (564)
Q Consensus 168 ~~i~~~~~~--~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a~~ 245 (564)
.+||+++.+ ... + ++|++||++|++++|.+.|.+++++||+++...+++++++|+++|+++|++|++|||++ +
T Consensus 144 ~~i~~~l~~~~~~~---~-~~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~f~~a~~lE~~Fwd~a-~ 218 (221)
T 2f2g_A 144 QESFAHCLEDGNKT---P-VELTGACHRWGNDGFKQYCSSVKNIAERCLENASGEVLGEAEDVLVRVLELEVAFWEMS-R 218 (221)
T ss_dssp HHHTTTHHHHHHTS---S-SCCCHHHHHHSSHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTT-C
T ss_pred HHHHHHHHhccCCC---C-cHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 999999876 322 2 48999999999999999999999999999988899999999999999999999999999 5
Q ss_pred C
Q 008479 246 A 246 (564)
Q Consensus 246 ~ 246 (564)
+
T Consensus 219 ~ 219 (221)
T 2f2g_A 219 G 219 (221)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2gm8_A TENA homolog/THI-4 thiaminase; transcription, transferase; HET: HMH; 2.50A {Pyrobaculum aerophilum} SCOP: a.132.1.3 PDB: 2gm7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=347.41 Aligned_cols=207 Identities=26% Similarity=0.384 Sum_probs=189.3
Q ss_pred CcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-
Q 008479 12 EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG- 90 (564)
Q Consensus 12 ~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~- 90 (564)
..-+.++.||+...+.|...++||||++|++||||.++|++||+||++||.+|+|+++++++|+++++++.++...+..
T Consensus 7 ~~~~~~~~l~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~l~~~~~~~ 86 (221)
T 2gm8_A 7 HHHGVTGELRRRADGIWQRILAHPFVAELYAGTLPMEKFKYYLLQDYNYLVNFAKALSLAASRAPSVDLMKTALELAYGT 86 (221)
T ss_dssp TCSSHHHHHHHHTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHhCCCcc--cccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHH
Q 008479 91 VLEELKMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY 167 (564)
Q Consensus 91 i~~E~~~h~~~~~~~gi~~~--~~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y 167 (564)
+.+|+++|+++++.+|++.+ ...+|+|+|.+|++||++++. |+ ++++++||+||+|+|
T Consensus 87 i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~~~-------------------~~~~laAl~pc~~~Y 147 (221)
T 2gm8_A 87 VTGEMANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTCALEG-------------------FYQCMAALLPCFWSY 147 (221)
T ss_dssp HHTHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHHhcCC-------------------HHHHHHHHHhHHHHH
Confidence 55699999999999999976 357899999999999999985 54 478999999999999
Q ss_pred HHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 168 AFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 168 ~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
.+||+++.+.... .++++|++||++|++++|.+.|.++++++|++ ++++++|+++|+++|++|++|||++
T Consensus 148 ~~ig~~l~~~~~~-~~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~-----~~~~~~~~~~f~~a~~lE~~Fwd~a 217 (221)
T 2gm8_A 148 AEIAERHGGKLRE-NPVHVYKKWASVYLSPEYRGLVERLRAVLDSS-----GLSAEELWPYFKEASLYELEFWQAA 217 (221)
T ss_dssp HHHHHHHGGGGGG-CCCHHHHHHHHHHHSHHHHHHHHHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCC-CCCchHHHHHHHhCCHHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999765321 14589999999999999999999999999997 4677899999999999999999998
|
| >1udd_A Transcriptional regulator; helix-bundle, lipid binding protein; 2.15A {Pyrococcus horikoshii} SCOP: a.132.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=349.49 Aligned_cols=210 Identities=24% Similarity=0.340 Sum_probs=190.0
Q ss_pred chHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HH
Q 008479 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG-VL 92 (564)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~-i~ 92 (564)
|+|+++||+...+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+ +++++.++...+.. +.
T Consensus 3 M~f~~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka-~~~~~~~l~~~~~~~i~ 81 (226)
T 1udd_A 3 VMITDKLRRDSEQIWKKIFEHPFVVQLYSGTLPLEKFKFYVLQDFNYLVGLTRALAVISSKA-EYPLMAELIELARDEVT 81 (226)
T ss_dssp CCHHHHHHHTTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CTTHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHhHHHHHHHHCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999 99999999998887 56
Q ss_pred HHHHHHHHHHHHhCCCcc--cccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHH
Q 008479 93 EELKMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (564)
Q Consensus 93 ~E~~~h~~~~~~~gi~~~--~~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (564)
+|+++|+++++.+|++.+ ...+|+|+|.+|++||++++. |+ ++++++||+||+|+|.+
T Consensus 82 ~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~~~-------------------~~~~laAl~pc~~~Y~~ 142 (226)
T 1udd_A 82 VEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATAYKGN-------------------IIEGLTALLPCFWSYAE 142 (226)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHhhCCCCHHHHHHHHHHHHHHhcCC-------------------HHHHHHHHHHHHHHHHH
Confidence 799999999999999976 357899999999999999985 54 47899999999999999
Q ss_pred HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCH-HHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 008479 170 LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTG-EELDIIEKLYHQAMKLEVEFFCAQPLAQP 248 (564)
Q Consensus 170 i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~-~~~~~~~~~F~~~~~lE~~Fw~~a~~~~~ 248 (564)
||+++...... .++++|++||++|++++|.+.|..+++++|++ + +++++|+++|+++|++|++|||++ ++..
T Consensus 143 ig~~l~~~~~~-~~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~-----~~~~~~~~~~~f~~a~~lE~~Fwd~a-~~~~ 215 (226)
T 1udd_A 143 IAEYHKDKLRD-NPIKIYREWGKVYLSNEYLNLVGRLRKIIDSS-----GHSGYDRLRRIFITGSKFELAFWEMA-WRGG 215 (226)
T ss_dssp HHHHTHHHHTT-CSCHHHHHHHHGGGSHHHHHHHHHHHHHHHTS-----CSSCHHHHHHHHHHHHHHHHHHHHHH-HHTC
T ss_pred HHHHHHhccCC-CCCchHHHHHHHhCCHHHHHHHHHHHHHHHhC-----chhHHHHHHHHHHHHHHHHHHHHHHh-hccc
Confidence 99999765321 14589999999999999999999999999997 3 577899999999999999999999 6655
Q ss_pred cc
Q 008479 249 TV 250 (564)
Q Consensus 249 ~~ 250 (564)
+|
T Consensus 216 ~w 217 (226)
T 1udd_A 216 DV 217 (226)
T ss_dssp --
T ss_pred hH
Confidence 53
|
| >3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=389.44 Aligned_cols=215 Identities=20% Similarity=0.317 Sum_probs=196.9
Q ss_pred CCcchHHHHHHH--HhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 008479 11 PEEEGLARRLWI--KFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELR 88 (564)
Q Consensus 11 ~~~~~~~~~lw~--~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~ 88 (564)
.+.++|++.||+ +..+.|..+++||||++|++||||.++|++||+|||+||.+|+|+++++++|+++.+++..+...+
T Consensus 327 ~~~~~f~~~L~~~~~~~~~w~~~~~HpFv~~L~~GtL~~~~F~~YL~QD~~yL~~far~~a~a~aka~~~~~~~~~~~~~ 406 (550)
T 3rm5_A 327 IPGGNFYEYLINHPKVKPHWDSYINHEFVKKVADGTLERKKFQFFIEQDYAYLVDYARVHCIAGSKAPCLEDMEKELVIV 406 (550)
T ss_dssp CCSSCHHHHHHHSTTTHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHH
T ss_pred CCCchHHHHHHhCchhhHHHHHHhCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 367899999999 889999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHH-HHHHhCC-Ccc--cccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHH
Q 008479 89 KGVLEELKMHDS-FVKEWGT-DLA--KMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPC 163 (564)
Q Consensus 89 ~~i~~E~~~h~~-~~~~~gi-~~~--~~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC 163 (564)
..+.+|+++|+. ++++||+ +.+ +..+++|+|++|++||++++. ++ ++++++||+||
T Consensus 407 ~~i~~E~~~h~~~~~~~~gi~~~~~~~~~~~~p~~~aYt~~l~~~a~~g~-------------------~~~~~aAl~pC 467 (550)
T 3rm5_A 407 GGVRTEMGQHEKRLKEVFGVKDPDYFQKIKRGPALRAYSRYFNDVSRRGN-------------------WQELVASLTPC 467 (550)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCCTTTTTSCCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHhhcCCCHHHHHHHHHHHHHHccCC-------------------HHHHHHHHHHH
Confidence 888899999999 6669999 654 356889999999999999996 44 46899999999
Q ss_pred HHHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 164 MRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 164 ~~~Y~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
+|+|.+||+++..... ..++++|++||++|+|++|.+.|.++++++|++++.++++++++|+++|+++|+||++||||+
T Consensus 468 ~~~Y~~ig~~l~~~~~-~~~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~l~~~F~~a~~lE~~Fwd~a 546 (550)
T 3rm5_A 468 LMGYGEALTKMKGKVT-APEGSVYHEWCETYASSWYREAMDEGEKLLNHILETYPPEQLDTLVTIYAEVCELETNFWTAA 546 (550)
T ss_dssp HHHHHHHHHTTTTCCC-SCTTSHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccC-CCCCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999875432 235789999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC
Q 008479 244 PLA 246 (564)
Q Consensus 244 ~~~ 246 (564)
++
T Consensus 547 -~~ 548 (550)
T 3rm5_A 547 -LE 548 (550)
T ss_dssp -HT
T ss_pred -hh
Confidence 54
|
| >2qzc_A Transcriptional activator TENA-1; heme oxygenase-like fold, structural genomics, joint center structural genomics, JCSG; 1.50A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-44 Score=347.67 Aligned_cols=205 Identities=21% Similarity=0.234 Sum_probs=186.7
Q ss_pred chHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HH
Q 008479 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG-VL 92 (564)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~-i~ 92 (564)
|+|+++||+...+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+ +.+++.++...+.. +.
T Consensus 5 M~f~~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~~~f~~Yl~QDy~yl~~f~r~~a~~~~ka-~~~~~~~~~~~~~~~i~ 83 (214)
T 2qzc_A 5 VGNVENLINGVGELWNKYVKHEFILKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKG-PIDKVTKILNLVFSSRD 83 (214)
T ss_dssp CHHHHHHHHHTTTHHHHHHTCHHHHHHHTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHTCC--
T ss_pred cHHHHHHHHhhHHHHHHHHCChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999 99999999999887 56
Q ss_pred HHHHHHHHHHHHhCCCcc--cccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHHH
Q 008479 93 EELKMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFL 170 (564)
Q Consensus 93 ~E~~~h~~~~~~~gi~~~--~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~i 170 (564)
+|+++|+++++.+|++.+ ...+|+|+|.+|++||++++.. . ++++++||+||+|+|.+|
T Consensus 84 ~E~~~h~~~~~~~Gi~~~~~~~~~~~p~t~aY~~~l~~~a~~-~------------------~~~~~aAl~pc~~~Y~~i 144 (214)
T 2qzc_A 84 KGLETHGKLYSKLDISRDVIVKTGYNLINYAYTRHLYYYANL-D------------------WNKFLVAWTPCMFGYSIV 144 (214)
T ss_dssp CHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHH-C------------------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHhhCCCChHHHHHHHHHHHHHhc-C------------------HHHHHHHHHHHHHHHHHH
Confidence 799999999999999976 3578999999999999999854 3 479999999999999999
Q ss_pred HHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCc
Q 008479 171 GKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQPT 249 (564)
Q Consensus 171 ~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a~~~~~~ 249 (564)
|+++.+. ++++|++||++|++++|.+.|.++++++|++ +++++ ++++|+++|++|++|||+++-..||
T Consensus 145 g~~l~~~-----~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~-----~~~~~-~~~~f~~a~~~E~~Fwd~a~~~~~~ 212 (214)
T 2qzc_A 145 GDYVIDS-----PNEVYKTWASFYASTEYKKRIEAILYALDEV-----SITED-LLNIFINSVRFEIGFWDASLRKDPT 212 (214)
T ss_dssp HHHHTTC-----SCHHHHHHHHHHHSHHHHHHHHHHHHHHTTS-----CCCHH-HHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhC-----CCChHHHHHHHhCCHHHHHHHHHHHHHHHhC-----ccHHH-HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9998753 3589999999999999999999999999997 35677 9999999999999999999544554
|
| >2a2m_A Hypothetical protein BT3146; putative TENA family transcriptional regulator, structural G joint center for structural genomics; 1.88A {Bacteroides thetaiotaomicron} SCOP: a.132.1.3 PDB: 2a2o_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=346.90 Aligned_cols=208 Identities=18% Similarity=0.316 Sum_probs=187.0
Q ss_pred CCCcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 008479 10 SPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK 89 (564)
Q Consensus 10 ~~~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~ 89 (564)
+.++++|+++||+...+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++ +++..+...+.
T Consensus 44 ~~~~~~f~~~L~~~~~~~w~~~~~HPFv~~L~~GtL~~e~F~~YL~QDy~yL~~far~~a~a~aka~~-~~~~~~~~~~~ 122 (258)
T 2a2m_A 44 VPAADSLFWKLWNGSLDTAVQVLQTDYFKGIAAGTLDPNAYGSLMVQDGYYCFRGRDDYATAATCAQD-ETLREFFKAKA 122 (258)
T ss_dssp CCCTTSHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-HHHHHHHHHHH
T ss_pred CCCCchHHHHHHHhhHHHHHHHHCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHH
Confidence 44458999999999999999999999999999999999999999999999999999999999999999 88888888887
Q ss_pred HHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHH
Q 008479 90 GVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYA 168 (564)
Q Consensus 90 ~i~~E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~ 168 (564)
.+.+ ++|++++++|||+.++..+++|+|++||+||++++. |++ +++++||+||+|+|.
T Consensus 123 ~~~~--~lh~~~~~~~Gi~~~~~~~~~pat~aYt~~ll~~a~~g~~-------------------~~~laAl~pC~~~Y~ 181 (258)
T 2a2m_A 123 KSYD--EYNETYHQTWHLREASGLIPGTDIKDYADYEAYVAGSLAS-------------------PYMCVVMLPCEYLWP 181 (258)
T ss_dssp HHHH--HHHHHHHHTSCBCCGGGBCCCHHHHHHHHHHHHHHHHSCT-------------------HHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHHHHHHcCCCHHHccCCCHHHHHHHHHHHHHHhcCCH-------------------HHHHHHHHHHHHHHH
Confidence 7666 999999999999976557889999999999999985 553 689999999999999
Q ss_pred HHHHHHHhhccCCCCccccccccc-ccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 008479 169 FLGKEFHALLNANEGNHPYTKWID-NYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQ 247 (564)
Q Consensus 169 ~i~~~~~~~~~~~~~~~~y~~Wi~-~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a~~~~ 247 (564)
+||+++.+... ++++|++||+ +|+|+ +.|.+++++||+++...+ +++|+++|+++|++|++|||++ +..
T Consensus 182 eig~~l~~~~~---~~~~Y~~WI~~~Y~~~---~~v~~~~~lld~~~~~~~---~~~l~~~F~~a~~lE~~Fwd~a-~~~ 251 (258)
T 2a2m_A 182 WIANFLDGYTP---TNSLYRFWIEWNGGTP---NGAYQMGNMLEQYRDKID---EDKAVEIFNTAMNYELKVFTSS-TIL 251 (258)
T ss_dssp HHHHHHGGGSC---TTSTTHHHHHHHCSCC---HHHHHHHHHHHTTGGGSC---HHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HHHHHHHhccC---CCchHHHHHHhccCCH---HHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHHh-hhh
Confidence 99999976432 3589999999 99998 889999999999986654 7789999999999999999999 554
Q ss_pred Cc
Q 008479 248 PT 249 (564)
Q Consensus 248 ~~ 249 (564)
.+
T Consensus 252 ~~ 253 (258)
T 2a2m_A 252 TT 253 (258)
T ss_dssp C-
T ss_pred cc
Confidence 44
|
| >1wwm_A Hypothetical protein TT2028; TENA/THI-4 family, putative transctiption activator, structu genomics; 2.61A {Thermus thermophilus} SCOP: a.132.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-41 Score=319.97 Aligned_cols=188 Identities=17% Similarity=0.127 Sum_probs=165.8
Q ss_pred chHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 008479 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLE 93 (564)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i~~ 93 (564)
+.++++||+...+.|...++||| |||+++|++||+||++||.+|+|+++++++|+++.+ +..+...+..+.+
T Consensus 2 ~~~~~~L~~~~~~~w~~~~~HpF-------tL~~~~f~~Yl~QD~~yL~~f~r~~a~~~~ka~~~~-~~~~~~~~~~~~~ 73 (190)
T 1wwm_A 2 GMLGLDLLKEVPGLLEEIKALPL-------RLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQAH-RAPLVQALMATVE 73 (190)
T ss_dssp ---------CCSSHHHHHHHCCC-------CCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHH
T ss_pred chHHHHHHHhHHHHHHHHHCCCC-------CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHH
Confidence 46899999999999999999999 999999999999999999999999999999999999 9999999888866
Q ss_pred HHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 008479 94 ELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKE 173 (564)
Q Consensus 94 E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~i~~~ 173 (564)
| +++++++||+. ..+++|+|++||+||++++.|+ ++++++||+||+|+|.+||++
T Consensus 74 E----~~~~~~~gi~~--~~~~~p~~~aY~~~l~~~a~~~-------------------~~~~~aAl~pc~~~Y~~ig~~ 128 (190)
T 1wwm_A 74 E----LDWLLLQGASP--SAPVHPVRAGYIALLEEMGRLP-------------------YAYRVVFFYFLNGLFLEAWAH 128 (190)
T ss_dssp H----HHHHHTTTCCS--SSCCCHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred H----HHHHHHcCCCC--CCCCCHHHHHHHHHHHHHcCCC-------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 6 67899999997 4789999999999999998733 479999999999999999999
Q ss_pred HHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 174 FHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 174 ~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
+.+ ++|+|++||++|+|++|.+.|.++++++|++++..++++ |+++|+++|++|++|||++
T Consensus 129 l~~------~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~---~~~~F~~a~~lE~~Fwd~a 189 (190)
T 1wwm_A 129 HVP------EEGPWAELSQHWFAPEFQAVLYDLEVLARGLWEDLDPEV---VRTYLRRILEAEKATWSLL 189 (190)
T ss_dssp HSC------SSSHHHHHHHHHSCTTHHHHHHHHHHHHHHHHTTSCHHH---HHHHHHHHHHHHHHHHHTT
T ss_pred hcc------CCcHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhCCHHH---HHHHHHHHHHHHHHHHHhh
Confidence 864 357899999999999999999999999999998877766 9999999999999999998
|
| >3oql_A TENA homolog; transcriptional activator, structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.54A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=287.44 Aligned_cols=215 Identities=10% Similarity=0.101 Sum_probs=182.4
Q ss_pred CCCCCCCCCcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCH-----
Q 008479 4 IPPKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDD----- 78 (564)
Q Consensus 4 ~~~~~~~~~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~----- 78 (564)
.++..+.++-++|+++||+...+.|...++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.
T Consensus 9 ~~~~~~~~~~p~~se~L~~~~~~iw~~i~~HPFv~~L~dGtL~~e~Fr~Yl~QDy~YL~~far~~Al~~aKa~~~~~~~~ 88 (262)
T 3oql_A 9 TGPLMEASSYPAWAQQLINDCSPAKARVVEHELYQQMRDAKLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGE 88 (262)
T ss_dssp CSCTTCGGGSCHHHHHHHHHHHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCHHH
T ss_pred CCccccccCCcHHHHHHHHHhHHHHHHHHCChHHHHHHcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhCccccCCCh
Confidence 466778888899999999999999999999999999999999999999999999999999999999999999863
Q ss_pred -HHHHHHHHHHHHHHHHH---HHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhh
Q 008479 79 -DAKLSISELRKGVLEEL---KMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTK 151 (564)
Q Consensus 79 -~~~~~l~~~~~~i~~E~---~~h~~~~~~~gi~~~~--~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~ 151 (564)
+.+.++ ..++..|+ ++|+.+++.+||+.++ ..+++|+|.+||+||++++. |+
T Consensus 89 ~~~~~~l---~~~i~vE~~H~~~~~~f~~~~Gis~eel~~~~~~P~~~aYt~~ml~~a~~g~------------------ 147 (262)
T 3oql_A 89 DMARRWL---MRNIRVELNHADYWVNWCAAHDVTLEDLHDQRVAPELHALSHWCWQTSSSDS------------------ 147 (262)
T ss_dssp HHHHHHH---HHHHHHTTTHHHHHHHHHHTTTCCHHHHHHTCSCGGGGHHHHHHHHHHHHSC------------------
T ss_pred HHHHHHH---HHHHHHHHhhHHHHHHHHHHcCCCHHHHhcCCCChHHHHHHHHHHHHHccCC------------------
Confidence 334444 34555565 3345789999999873 67899999999999999986 54
Q ss_pred hHHHHHHHHHHHHHHHHHHHH---------HHHhhccCCCCcccccccccccCChhHHHH-HHHHHHHHHHHhccC-CHH
Q 008479 152 VAAYTLGAMSPCMRLYAFLGK---------EFHALLNANEGNHPYTKWIDNYSSESFQAS-ALQNEDLLDKLSVSL-TGE 220 (564)
Q Consensus 152 ~~a~~l~Al~pC~~~Y~~i~~---------~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~-v~~l~~~ld~~~~~~-~~~ 220 (564)
++++++|++ +|+|.+||+ .+....+ ...++.|.+||+.|+ +|... +.+..+++|+++.+. +++
T Consensus 148 -l~e~lAAl~--ya~e~~ig~~s~~~~~g~~~~~~~~-~~~~~~~~~w~~~h~--~~D~~H~~e~~~li~~l~~~~~~~~ 221 (262)
T 3oql_A 148 -LAVAMAATN--YAIEGATGEWSAVVCSTGVYAEAFA-EETRKKSMKWLKMHA--QYDDAHPWEALEIICTLVGNKPSLQ 221 (262)
T ss_dssp -HHHHHHHTT--THHHHHHHHHHHHHHSSSHHHHTSC-HHHHHHHHHHHHHHH--TCC-CHHHHHHHHHHHHHCSSCCHH
T ss_pred -HHHHHHHHH--HHHHHHhhhHHHHhhhhHHHhcCCC-cccChHHHHHHHHHH--HHHHHhHHHHHHHHHHHhccCCCHH
Confidence 478999998 999999998 5554332 112567999999998 67666 999999999999877 899
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCC
Q 008479 221 ELDIIEKLYHQAMKLEVEFFCAQPL 245 (564)
Q Consensus 221 ~~~~~~~~F~~~~~lE~~Fw~~a~~ 245 (564)
++++|+++|++++.+|+.|||+++.
T Consensus 222 e~~~~~~a~~~S~~~~~~fld~~y~ 246 (262)
T 3oql_A 222 LQAELRQAVTKSYDYMYLFLERCIQ 246 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999933
|
| >1rcw_A CT610, CADD; iron, DI-iron, redox enzyme, metallo enzyme, oxidoreductase,; 2.50A {Chlamydia trachomatis} SCOP: a.132.1.4 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-28 Score=239.72 Aligned_cols=201 Identities=14% Similarity=0.151 Sum_probs=165.0
Q ss_pred cchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-
Q 008479 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV- 91 (564)
Q Consensus 13 ~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i- 91 (564)
+++|+++||+... +...++|||+++|.+|+||++.|++||.||++|+.+|.|+++.+++++++++.+..+...+...
T Consensus 5 ~m~f~~~L~~~~~--~~~~~~HPf~~~l~~G~L~~e~~~~yl~qdy~yl~~f~~~~a~~~~~~~~~~~~~~~~~~i~~e~ 82 (231)
T 1rcw_A 5 FMNFLDQLDLIIQ--NKHMLEHTFYVKWSKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDDLEARKLLLDNLMDEE 82 (231)
T ss_dssp --CHHHHHHHHHH--HTCGGGSHHHHHHHTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HhhcccCHHHHHHhCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc
Confidence 3679999999886 5556899999999999999999999999999999999999999999999999888776554433
Q ss_pred ---HHHHHHHHHHHHHhCCCcc--cccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHH
Q 008479 92 ---LEELKMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRL 166 (564)
Q Consensus 92 ---~~E~~~h~~~~~~~gi~~~--~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~ 166 (564)
..|.++|.++++.+|++.+ ...++.|+|++|++||+.++..+. ++++++|+++.+++
T Consensus 83 ~~~~~h~~l~~~~~~~~Gi~~~~~~~~~~~p~t~~y~~~~~~~~~~~~------------------~~~~laal~~~E~~ 144 (231)
T 1rcw_A 83 NGYPNHIDLWKQFVFALGVTPEELEAHEPSEAAKAKVATFMRWCTGDS------------------LAAGVAALYSYESQ 144 (231)
T ss_dssp SSSSCHHHHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHHTSSC------------------HHHHHHHHHHHHTT
T ss_pred CCCCChHHHHHHHHHHcCCCHHHHhcCCCCHHHHHHHHHHHHHHcCCC------------------HHHHHHHHHHHHHH
Confidence 2369999999999999976 356789999999999999986332 35788886544555
Q ss_pred HHHHHHHHHhhccCCCCcccccccccccCChhH-------HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHh
Q 008479 167 YAFLGKEFHALLNANEGNHPYTKWIDNYSSESF-------QASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEF 239 (564)
Q Consensus 167 Y~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f-------~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~F 239 (564)
+..+.+.... ..++|..||+.|+.+.| .+.+..+.+++|+++. ++++++.++|.+++++|++|
T Consensus 145 ~~~~~~~~~~------~~~~~~~wi~~~~~~~f~~h~~~d~~h~~~~~~~l~~~~~----~~~~~~~~~~~~~~~le~~f 214 (231)
T 1rcw_A 145 IPRIAREKIR------GLTEYFGFSNPEDYAYFTEHEEADVRHAREEKALIEMLLK----DDADKVLEASQEVTQSLYGF 214 (231)
T ss_dssp HHHHHHHHHH------HHHHHSCCCSGGGGHHHHHHHHHHHHHHHHHHHHHHHHCS----SCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH------HHHHHCCCCChhhhHHHHHHHHHhHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 5555443322 11345589999999999 6788999999999974 57789999999999999999
Q ss_pred hccC
Q 008479 240 FCAQ 243 (564)
Q Consensus 240 w~~a 243 (564)
||++
T Consensus 215 wd~~ 218 (231)
T 1rcw_A 215 LDSF 218 (231)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 9999
|
| >3dde_A TENA/THI-4 protein, domain of unknown function WI oxygenase-like fold; structural genomics, joint center for structural genomics; HET: MSE PGE; 2.30A {Shewanella denitrificans OS217} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-25 Score=219.45 Aligned_cols=202 Identities=14% Similarity=0.098 Sum_probs=168.5
Q ss_pred HHHHHHhHHhHHHhhcC-hHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHH--HHHHHHHHHHHHH-H
Q 008479 18 RRLWIKFKRESVFAMYS-PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDD--AKLSISELRKGVL-E 93 (564)
Q Consensus 18 ~~lw~~~~~~~~~~~~h-pFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~--~~~~l~~~~~~i~-~ 93 (564)
++||++..+.|...++| |||++|.+||||.+.|++||.||++||.+|+|+++.+++++++.+ .+..+...+.... .
T Consensus 8 ~~L~~~~~~~w~~~~~h~pFv~~l~~GtL~~~~f~~yl~Qdy~yl~~~~r~la~a~~ka~~~~~~~~~~~~~~~~~e~~~ 87 (239)
T 3dde_A 8 TKLEQKVATMWDSILTNSPFIHEVLDGKATKALYAIYMTETYHYTKHNAKNQALVGIMGKDLPGKYLSFCFHHAHEEAGH 87 (239)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHTTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHCh
Confidence 99999999999999999 999999999999999999999999999999999999999999987 7777776665543 4
Q ss_pred HHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHHH
Q 008479 94 ELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFL 170 (564)
Q Consensus 94 E~~~h~~~~~~~gi~~~~--~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~i 170 (564)
|..+++. ++.+|++.++ ..+|+|+|.+|++||+.++. +++ +.+++++++|+|+| .+
T Consensus 88 e~~~~~~-l~~~G~~~~~~~~~~~~pat~aY~~~l~~~a~~~~~-------------------~~~la~~~~~E~~y-~~ 146 (239)
T 3dde_A 88 ELMALSD-IASIGFDREDVLSSKPLPATETLIAYLYWISATGNP-------------------VQRLGYSYWAENVY-GY 146 (239)
T ss_dssp HHHHHHH-HHHTTCCHHHHHTCCCCHHHHHHHHHHHHHHHSSCG-------------------GGGHHHHHHHHTCH-HH
T ss_pred HHHHHHH-HHHhCCCHHHHHhCCCChHHHHHHHHHHHHHhCCCH-------------------HHHHHHHHHHHHhh-HH
Confidence 6566666 8899999763 56889999999999999985 543 56899999999999 77
Q ss_pred HHHHHhhcc--CCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008479 171 GKEFHALLN--ANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQP 244 (564)
Q Consensus 171 ~~~~~~~~~--~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a~ 244 (564)
|..+.+... ...++ ....|+..+...+- +.+..++++||+++ .++++++++.+..+.++++...||++..
T Consensus 147 ~~~~~~~l~~~~~l~~-~~~~f~~~h~~~d~-~h~~~~~~~ld~~~--~~~~~~~~ii~~a~~~~~l~~~~f~~l~ 218 (239)
T 3dde_A 147 IDPVLKAIQSTLDLTP-QSMKFFIAHSKIDA-KHAEEVNEMLHEVC--KTQEDVDSVVAVMENSLVLTARILDDVW 218 (239)
T ss_dssp HHHHHHHHHHHTTCCG-GGGHHHHHHHHHHH-HHHHHHHHHHHHHC--CSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCH-HHHHHHHHHHhcch-hHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 765543210 01122 25789998876554 55678999999986 5899999999999999999999999983
|
| >3hlx_A Pyrroloquinoline-quinone synthase; PQQC, PQQ biosynthesis, oxidase, complex, all helical, oxido; HET: PQQ; 1.30A {Klebsiella pneumoniae subsp} SCOP: a.132.1.4 PDB: 3hml_A* 1otv_A 3hnh_A* 1otw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=207.51 Aligned_cols=205 Identities=10% Similarity=0.033 Sum_probs=164.9
Q ss_pred CCcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 008479 11 PEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90 (564)
Q Consensus 11 ~~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~ 90 (564)
-..+.|+++||+...+.+ .+|||+++|.+|+|+++.|++|++||++|+.+|.+.++.+++|++|.+.+.++...+..
T Consensus 7 ~~~~~F~~~Lr~~~~~~~---~~HPF~~~l~~G~L~~e~~r~yv~qdy~Yl~~f~r~~A~i~ak~~d~e~rr~l~~ni~~ 83 (258)
T 3hlx_A 7 LSPQAFEEALRAKGDFYH---IHHPYHIAMHNGNATREQIQGWVANRFYYQTTIPLKDAAIMANCPDAQTRRKWVQRILD 83 (258)
T ss_dssp CCHHHHHHHHHHGGGGSG---GGSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhHHHH---cCChHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 456789999999886544 38999999999999999999999999999999999999999999999999888776554
Q ss_pred HH------HHHHHHHHHHHHhCCCccc--ccC-CChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHH
Q 008479 91 VL------EELKMHDSFVKEWGTDLAK--MAT-VNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAM 160 (564)
Q Consensus 91 i~------~E~~~h~~~~~~~gi~~~~--~~~-~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al 160 (564)
.. .|+++|.++++.+|++.++ ..+ +.|+|+.|++++.+.+. ++ ++++++|+
T Consensus 84 eeg~~~~~~hiel~~~fa~alGis~eel~~~~~~~P~t~~~vdaY~~~a~~~s-------------------~~e~vAA~ 144 (258)
T 3hlx_A 84 HDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGVRFAVDAYLNFARRAC-------------------WQEAACSS 144 (258)
T ss_dssp HHCSSSSCHHHHHHHHHHHHTTCCHHHHHTCCSCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHGG
T ss_pred HhcccCCccHHHHHHHHHHHcCCCHHHHhhCCCCCcHHHHHHHHHHHHHhcCC-------------------HHHHHHHH
Confidence 33 5789999999999999873 455 69999988888877774 44 36899999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHH-------HHHHHHHhccCCHHHHHHHHHHHHHHH
Q 008479 161 SPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN-------EDLLDKLSVSLTGEELDIIEKLYHQAM 233 (564)
Q Consensus 161 ~pC~~~Y~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l-------~~~ld~~~~~~~~~~~~~~~~~F~~~~ 233 (564)
++|.+. ..|.+.... .-+.|..||+.++-+.|...+.+. .+++-..+ .++++++++.++++.+|
T Consensus 145 L~E~~~-p~i~~~r~~------~~~~~y~~i~~~~l~yF~~h~~~a~~D~~hal~~vl~~~--~t~e~q~~a~~a~~~~~ 215 (258)
T 3hlx_A 145 LTELFA-PQIHQSRLD------SWPQHYPWIKEEGYFFFRSRLSQANRDVEHGLALAKAYC--DSAEKQNRMLEILQFKL 215 (258)
T ss_dssp GGGGTH-HHHHHHHHH------HHHHHCTTSCGGGGHHHHHHHHHHHHHHHHHHHHHHHHC--CSHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHhh------cHHHhCCCCChhHHHHHHHHhhcccccHHHHHHHHHHHc--CCHHHHHHHHHHHHHHH
Confidence 965433 333332211 235678899999989998877555 55543333 48999999999999999
Q ss_pred HHHHHhhccCCCC
Q 008479 234 KLEVEFFCAQPLA 246 (564)
Q Consensus 234 ~lE~~Fw~~a~~~ 246 (564)
++++.|||+.+..
T Consensus 216 ~~lw~~lDa~~~a 228 (258)
T 3hlx_A 216 DILWSMLDAMTMA 228 (258)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998443
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7.4e-23 Score=208.68 Aligned_cols=208 Identities=19% Similarity=0.258 Sum_probs=156.6
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCccccC
Q 008479 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (564)
Q Consensus 262 ~~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~ 341 (564)
++++||||||||||..+..... . .+++.+.+.+..+++.|.+....+.++|.|.+..+.
T Consensus 42 ~kL~VV~DfdgTLT~~~~~g~~---------~------------~s~~~i~e~~~~~~~~~~~~~~~l~~~y~~~e~~~~ 100 (297)
T 4fe3_A 42 AKLQIITDFNMTLSRFSYNGKR---------C------------PTCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPV 100 (297)
T ss_dssp HHEEEEECCTTTTBCSEETTEE---------C------------CCHHHHHHTSTTSCHHHHHHHHHHHHHHHHHHHCSS
T ss_pred hhEEEEEcCCCCceeeccCCeE---------e------------echHHHHHhhhhcCHHHHHHHHHHHHhhcccccccc
Confidence 5788999999999987632110 0 011222233344455667777777788888887777
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHhh--cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHH
Q 008479 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD 419 (564)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~ 419 (564)
.+.++..+ .|.+|+.++++.+.+. |++.+.+.+.++ ++++|||+.++++.|+++| ++++|+|+|+ .+
T Consensus 101 ~~~~ek~~---~~~~~~~~~~e~l~~~----gl~~~~~~~~v~~~~i~l~~g~~e~i~~l~~~g---i~v~ivSgg~-~~ 169 (297)
T 4fe3_A 101 LTVEEKFP---YMVEWYTKSHGLLIEQ----GIPKAKLKEIVADSDVMLKEGYENFFGKLQQHG---IPVFIFSAGI-GD 169 (297)
T ss_dssp SCHHHHHH---HHHHHHHHHHHHHHHT----TCBGGGHHHHHHTSCCCBCBTHHHHHHHHHHTT---CCEEEEEEEE-HH
T ss_pred ccHHHhhh---hhHHhhhhhHHHHhhc----CccHHHHHHHHHhcCCCCCCcHHHHHHHHHHcC---CeEEEEeCCc-HH
Confidence 77776644 5779999999999874 557777777765 5899999999999999999 9999999999 89
Q ss_pred HHHHHHhhcCC--CceeEEeeceeecCccccccccccCCCCCchHHHHHHHH---HHhCCCCCccEEEEcCCccchhhhh
Q 008479 420 LIRASFSSAGL--NALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTL---EKYGTDRKNLSVYIGDSVGDLLCLL 494 (564)
Q Consensus 420 ~I~~~l~~~g~--~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~---~~~~~~~~~~viyiGDs~~Dl~~l~ 494 (564)
+|++++++.|+ ++..|+||.+.++++..++.+..++....+|..-+.+.. .... .+.+++++|||.||++|+.
T Consensus 170 ~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~k~~~~~~~~~--~~~~v~~vGDGiNDa~m~k 247 (297)
T 4fe3_A 170 VLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLK--DNSNIILLGDSQGDLRMAD 247 (297)
T ss_dssp HHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHTCHHHHHHTT--TCCEEEEEESSGGGGGTTT
T ss_pred HHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHHHHHHHHHhhc--cCCEEEEEeCcHHHHHHHh
Confidence 99999999885 456899999999987777777766666666665443322 1111 2468999999999999954
Q ss_pred ---hcCccEEEc
Q 008479 495 ---EADIGIVIG 503 (564)
Q Consensus 495 ---~Ad~giv~~ 503 (564)
.||+||.+|
T Consensus 248 ~l~~advgiaiG 259 (297)
T 4fe3_A 248 GVANVEHILKIG 259 (297)
T ss_dssp TCSCCSEEEEEE
T ss_pred CccccCeEEEEE
Confidence 899999887
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.86 E-value=9e-21 Score=184.43 Aligned_cols=148 Identities=18% Similarity=0.158 Sum_probs=129.3
Q ss_pred hccCCCHHHHHHHhhc-----C--CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceee
Q 008479 370 VLKGINLEDIKKAGER-----L--SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSF 442 (564)
Q Consensus 370 ~f~Gi~~~~i~~~~~~-----i--~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~ 442 (564)
.+.|++.+++.+..+. + .+.||+.++++.++++| ++++|+|++. ..+++.+++..|+ ..+++|.+.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~ivS~~~-~~~~~~~~~~~g~--~~~~~~~~~~ 141 (232)
T 3fvv_A 68 LLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAG---DLCALVTATN-SFVTAPIARAFGV--QHLIATDPEY 141 (232)
T ss_dssp HHHTSCHHHHHHHHHHHHHHTTGGGCCHHHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTC--CEEEECEEEE
T ss_pred HhcCCCHHHHHHHHHHHHHHhhhhhcCHHHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCC--CEEEEcceEE
Confidence 3457788887765432 2 67999999999999999 9999999997 8999999999887 4799999999
Q ss_pred cCccccccccccCCCCCchHHHHHHHHHHhC---CCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHHHHHhhCCce
Q 008479 443 KESISTGEIIEKVESPIDKVQAFNNTLEKYG---TDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTF 519 (564)
Q Consensus 443 ~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~---~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~~~~~~gi~~ 519 (564)
.+|.++|.+.+..+.+.+|...++.+.+..+ . .+.++++||||.+|++|+..|++++++.+++.|++.|+++||++
T Consensus 142 ~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~~~~~~-~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~l~~~a~~~~w~~ 220 (232)
T 3fvv_A 142 RDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALG-DFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQV 220 (232)
T ss_dssp ETTEEEEEEESSCSSTHHHHHHHHHHHHHTTCCGG-GSSEEEEEECCGGGHHHHHHSSEEEEESCCHHHHHHHHHHTCEE
T ss_pred ECCEEeeeecCCCCcchHHHHHHHHHHHHcCCCcC-chhheEEEeCCHhhHHHHHhCCCeEEECcCHHHHHHHHHCCCcE
Confidence 8899999888777778899999999988766 4 35789999999999999999999999999999999999999999
Q ss_pred eecCc
Q 008479 520 IPLYP 524 (564)
Q Consensus 520 ~p~~~ 524 (564)
+++..
T Consensus 221 ~~~~~ 225 (232)
T 3fvv_A 221 IDLFD 225 (232)
T ss_dssp ECCC-
T ss_pred eehhh
Confidence 99975
|
| >3bjd_A Putative 3-oxoacyl-(acyl-carrier-protein) synthas; structural genomics, APC5632, 3-oxoacyl-(acyl-carrier-protei synthase, PSI-2; HET: MSE; 1.85A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.9e-19 Score=184.61 Aligned_cols=204 Identities=10% Similarity=0.078 Sum_probs=156.4
Q ss_pred CcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 008479 12 EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV 91 (564)
Q Consensus 12 ~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i 91 (564)
..++|++.|++.... ....+|||++++.+|+|+.+.|++|++||++|+..|.+.++.+.+++++.+.+..+.+.+..-
T Consensus 106 s~~~F~~~L~~~~~~--~~~~~HPf~~~l~~G~Ls~e~~r~yl~Qdy~yl~~f~~~lA~~~a~~~~~~~r~~l~e~i~DE 183 (332)
T 3bjd_A 106 SEEDFQKRLEQEIAA--QSRERHPMSQYVFSGSASRAQLQVFLRHQWFRTFRLYRDAADLLVNLTDVDEAAALARYLYGE 183 (332)
T ss_dssp CHHHHHHHHHHHHHC--C--CCCHHHHHHHHTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHTCCSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh--cccccCcHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 556799999988754 334789999999999999999999999999999999999999999999998877776643221
Q ss_pred ----HHH---HHHHHHHHHHhCCCcc-cccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHH-
Q 008479 92 ----LEE---LKMHDSFVKEWGTDLA-KMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMS- 161 (564)
Q Consensus 92 ----~~E---~~~h~~~~~~~gi~~~-~~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~- 161 (564)
..| .++|.++++.+|++.+ ...++.|++..|++|+..++. +++ ++++++++
T Consensus 184 ~G~g~~e~~H~el~~~~l~~lGld~~~~~~~~~p~~~~~v~~~~~~~~~~~~-------------------~~alaal~~ 244 (332)
T 3bjd_A 184 LGEEDEKGSHPRLLAKLLEAIGLEADFQAVSTMPEEIAYLNNRARAFRHAEV-------------------GWGLAVFYI 244 (332)
T ss_dssp TTTTCGGGCHHHHHHHHHHHTTCCCCTTCCCCCHHHHHHHHHHHHHHHCSST-------------------HHHHHHHHH
T ss_pred hCCCCccccHHHHHHHHHHHcCCChhHhcccCCHHHHHHHHHHHHHHhcCCH-------------------HHHHHHHHH
Confidence 124 7999999999999976 334568999999999999985 543 46778888
Q ss_pred ---HHHHHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Q 008479 162 ---PCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVE 238 (564)
Q Consensus 162 ---pC~~~Y~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~ 238 (564)
||.|+|..+++.+.+...+....+.|+.||+.-....+.. ...++++.. +++..+.+..+-..+++.++.
T Consensus 245 ~E~~~p~~y~~i~~~l~~~g~~~~~~~yf~~HI~lD~~H~~~~----~~~ll~~~~---~~~~q~~~~~a~~~~l~~~~~ 317 (332)
T 3bjd_A 245 TELVVPGNHEKLYRALLQAGLSEDQAEYYKVHISLVPPRAKRE----WQLIARRIP---DVQFQNAFLTSLSQHFRVERA 317 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCTTTTHHHHHHHHHCC---CTT----HHHHHTTTT---CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHcCCCcccchHHHHHHHHhHHHHHHH----HHHHHHhCC---CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999874321123378999999754322222 233666653 455555666676777799999
Q ss_pred hhccC
Q 008479 239 FFCAQ 243 (564)
Q Consensus 239 Fw~~a 243 (564)
|||..
T Consensus 318 f~D~l 322 (332)
T 3bjd_A 318 YYDAI 322 (332)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99976
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.5e-18 Score=180.78 Aligned_cols=192 Identities=21% Similarity=0.273 Sum_probs=155.0
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCcccc
Q 008479 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (564)
Q Consensus 261 ~~~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~ 340 (564)
+++.+|+|||||||++.+++..+++.. + ....+..+...++.+
T Consensus 183 ~~~k~viFD~DgTLi~~~~~~~la~~~-----g-----------------~~~~~~~~~~~~~~g--------------- 225 (415)
T 3p96_A 183 RAKRLIVFDVDSTLVQGEVIEMLAAKA-----G-----------------AEGQVAAITDAAMRG--------------- 225 (415)
T ss_dssp TCCCEEEECTBTTTBSSCHHHHHHHHT-----T-----------------CHHHHHHHHHHHHTT---------------
T ss_pred cCCcEEEEcCcccCcCCchHHHHHHHc-----C-----------------CcHHHHHHHHHHhcC---------------
Confidence 467799999999999999988877643 1 333444444433222
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 008479 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (564)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~ 420 (564)
.+++.+. +. .++ ..++|++.+.+.+..+.+.++||+.++++.++++| ++++|+|+|+ ..+
T Consensus 226 ~~~~~~~------~~-------~~~---~~l~~~~~~~~~~~~~~~~~~pg~~e~l~~Lk~~G---~~~~ivS~~~-~~~ 285 (415)
T 3p96_A 226 ELDFAQS------LQ-------QRV---ATLAGLPATVIDEVAGQLELMPGARTTLRTLRRLG---YACGVVSGGF-RRI 285 (415)
T ss_dssp CSCHHHH------HH-------HHH---HTTTTCBTHHHHHHHHHCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHH
T ss_pred CcCHHHH------HH-------HHH---HHhcCCCHHHHHHHHHhCccCccHHHHHHHHHHCC---CEEEEEcCCc-HHH
Confidence 1223221 11 222 46789999999998889999999999999999999 9999999998 899
Q ss_pred HHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccE
Q 008479 421 IRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 500 (564)
Q Consensus 421 I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 500 (564)
++.+++..|+ ..+++|.+.+.+|.+||.+.+.+..+..|...++.+.+..+.+ +.++++||||.+|+.|+..||+|+
T Consensus 286 ~~~~~~~lgl--~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~-~~~~i~vGD~~~Di~~a~~aG~~v 362 (415)
T 3p96_A 286 IEPLAEELML--DYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRAGVP-MAQTVAVGDGANDIDMLAAAGLGI 362 (415)
T ss_dssp HHHHHHHTTC--SEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEE
T ss_pred HHHHHHHcCc--cceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHHcCcC-hhhEEEEECCHHHHHHHHHCCCeE
Confidence 9999999887 5899999999999999988877777888999999999988773 588999999999999999999999
Q ss_pred EEcCChhHHHHH
Q 008479 501 VIGSSSSLRRVG 512 (564)
Q Consensus 501 v~~~~~~L~~~~ 512 (564)
++++++.+++.+
T Consensus 363 a~~~~~~~~~~a 374 (415)
T 3p96_A 363 AFNAKPALREVA 374 (415)
T ss_dssp EESCCHHHHHHC
T ss_pred EECCCHHHHHhC
Confidence 998888777654
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=171.84 Aligned_cols=192 Identities=17% Similarity=0.201 Sum_probs=151.9
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCcccc
Q 008479 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (564)
Q Consensus 261 ~~~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~ 340 (564)
+++.+|+|||||||++.++...+++.. + ....+..+...|+.+
T Consensus 106 ~~~kaviFDlDGTLid~~~~~~la~~~-----g-----------------~~~~~~~~~~~~~~g--------------- 148 (317)
T 4eze_A 106 PANGIIAFDMDSTFIAEEGVDEIAREL-----G-----------------MSTQITAITQQAMEG--------------- 148 (317)
T ss_dssp CCSCEEEECTBTTTBSSCHHHHHHHHT-----T-----------------CHHHHHHHHHHHHTT---------------
T ss_pred CCCCEEEEcCCCCccCCccHHHHHHHh-----C-----------------CcHHHHHHHHHHhcC---------------
Confidence 467799999999999999887776633 1 333444444433222
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 008479 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (564)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~ 420 (564)
..++.+. +. .++ ..+.|.+.+.+.+..+.+.+.||+.++++.++++| ++++|||++. ..+
T Consensus 149 ~~~~~~~------l~-------~~~---~~l~~~~~~~i~~~~~~~~l~pg~~e~L~~Lk~~G---~~v~IvSn~~-~~~ 208 (317)
T 4eze_A 149 KLDFNAS------FT-------RRI---GMLKGTPKAVLNAVCDRMTLSPGLLTILPVIKAKG---FKTAIISGGL-DIF 208 (317)
T ss_dssp SSCHHHH------HH-------HHH---HTTTTCBHHHHHHHHHTCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHH
T ss_pred CCCHHHH------HH-------HHH---HHhcCCCHHHHHHHHhCCEECcCHHHHHHHHHhCC---CEEEEEeCcc-HHH
Confidence 1222221 11 122 45678899999999899999999999999999999 9999999998 899
Q ss_pred HHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccE
Q 008479 421 IRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 500 (564)
Q Consensus 421 I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 500 (564)
++.+++..|+ ..+++|.+.+++|.++|.+.+.+..+..|...++.+++..+.+ +.++++||||.+|+.|+..||+|+
T Consensus 209 ~~~~l~~lgl--~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~~lgv~-~~~~i~VGDs~~Di~aa~~AG~~v 285 (317)
T 4eze_A 209 TQRLKARYQL--DYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARLNIA-TENIIACGDGANDLPMLEHAGTGI 285 (317)
T ss_dssp HHHHHHHHTC--SEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEE
T ss_pred HHHHHHHcCC--CeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHHHcCCC-cceEEEEeCCHHHHHHHHHCCCeE
Confidence 9999999887 5789999999999999988777777778999999999888763 578999999999999999999999
Q ss_pred EEcCChhHHHHH
Q 008479 501 VIGSSSSLRRVG 512 (564)
Q Consensus 501 v~~~~~~L~~~~ 512 (564)
++++++.+++.+
T Consensus 286 a~~~~~~~~~~a 297 (317)
T 4eze_A 286 AWKAKPVVREKI 297 (317)
T ss_dssp EESCCHHHHHHC
T ss_pred EeCCCHHHHHhc
Confidence 998777666544
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=99.73 E-value=9.6e-17 Score=169.12 Aligned_cols=129 Identities=19% Similarity=0.224 Sum_probs=106.3
Q ss_pred hhccCCCHHHHHHHhhc----------------------------------CCCCccHHHHHHHHHHcCCCCCcEEEEcc
Q 008479 369 GVLKGINLEDIKKAGER----------------------------------LSLQDGCTTFFQKVVKNENLNANVHVLSY 414 (564)
Q Consensus 369 ~~f~Gi~~~~i~~~~~~----------------------------------i~lr~G~~efl~~l~~~g~~~~~~~IvS~ 414 (564)
.+|.|+|.+++++.++. +.++||+.++++.|+++| ++++|||+
T Consensus 169 ~l~~GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~G---~~v~IVSg 245 (385)
T 4gxt_A 169 FLLKNYKTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEENG---IDCYIVSA 245 (385)
T ss_dssp GGGTTCCHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHTT---CEEEEEEE
T ss_pred HHHcCCCHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHCC---CeEEEEcC
Confidence 58899999999987541 237999999999999999 99999999
Q ss_pred ccCHHHHHHHHhhcC----CCceeEEeeceeec-Cccccccccc--cCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCc
Q 008479 415 CWCGDLIRASFSSAG----LNALNVHANEFSFK-ESISTGEIIE--KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSV 487 (564)
Q Consensus 415 g~s~~~I~~~l~~~g----~~~~~I~aN~l~~~-~g~~tG~~~~--~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~ 487 (564)
|+ .++++++.++.| ++..+|++|++.++ +|.+||++.+ +++.+..|...+++++... . ....++++|||.
T Consensus 246 g~-~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~~i~~~~~~~-~-~~~~i~a~GDs~ 322 (385)
T 4gxt_A 246 SF-IDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQTINKLIKND-R-NYGPIMVGGDSD 322 (385)
T ss_dssp EE-HHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHHHHHHHTCCT-T-EECCSEEEECSG
T ss_pred Cc-HHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHHHHHHHHHhc-C-CCCcEEEEECCH
Confidence 99 999999998864 56678999999996 6899998865 4677889999999987532 1 135689999999
Q ss_pred cchhhhhh---cCccEEEc
Q 008479 488 GDLLCLLE---ADIGIVIG 503 (564)
Q Consensus 488 ~Dl~~l~~---Ad~giv~~ 503 (564)
||++||.. +.+|++|.
T Consensus 323 ~D~~ML~~~~~~~~~liin 341 (385)
T 4gxt_A 323 GDFAMLKEFDHTDLSLIIH 341 (385)
T ss_dssp GGHHHHHHCTTCSEEEEEC
T ss_pred hHHHHHhcCccCceEEEEc
Confidence 99999986 34467775
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.5e-17 Score=157.70 Aligned_cols=136 Identities=17% Similarity=0.153 Sum_probs=119.6
Q ss_pred hhccCCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCcccc
Q 008479 369 GVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESIST 448 (564)
Q Consensus 369 ~~f~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~t 448 (564)
..+.|.+.+++.+..+.+.+.||+.++++.++++| ++++|+|++. ..+++.+++..|+ ...+.+.+.++++.++
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~gl--~~~f~~~~~~~~~~~~ 130 (217)
T 3m1y_A 57 SKLKNMPLKLAKEVCESLPLFEGALELVSALKEKN---YKVVCFSGGF-DLATNHYRDLLHL--DAAFSNTLIVENDALN 130 (217)
T ss_dssp HTTTTCBHHHHHHHHTTCCBCBTHHHHHHHHHTTT---EEEEEEEEEE-HHHHHHHHHHHTC--SEEEEEEEEEETTEEE
T ss_pred HHhcCCCHHHHHHHHhcCcCCCCHHHHHHHHHHCC---CEEEEEcCCc-hhHHHHHHHHcCc--chhccceeEEeCCEEE
Confidence 45688899999999889999999999999999998 9999999997 8999999998886 4678888888888888
Q ss_pred ccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHHH
Q 008479 449 GEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRV 511 (564)
Q Consensus 449 G~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~~ 511 (564)
|.+.+..+.+..|...++.+++..+.+ +.++++||||.+|+.|+..||+++++.+.+.+++.
T Consensus 131 ~~~~~~~~~~k~k~~~~~~~~~~~g~~-~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~l~~~ 192 (217)
T 3m1y_A 131 GLVTGHMMFSHSKGEMLLVLQRLLNIS-KTNTLVVGDGANDLSMFKHAHIKIAFNAKEVLKQH 192 (217)
T ss_dssp EEEEESCCSTTHHHHHHHHHHHHHTCC-STTEEEEECSGGGHHHHTTCSEEEEESCCHHHHTT
T ss_pred eeeccCCCCCCChHHHHHHHHHHcCCC-HhHEEEEeCCHHHHHHHHHCCCeEEECccHHHHHh
Confidence 888777778889999999999988774 57899999999999999999999999877776644
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.65 E-value=6.1e-16 Score=160.05 Aligned_cols=190 Identities=17% Similarity=0.208 Sum_probs=147.0
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCccccC
Q 008479 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (564)
Q Consensus 262 ~~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~ 341 (564)
.+..++|||||||+..+++..+++.. + ....+..+...++.+ .
T Consensus 106 ~~~~viFD~DgTLi~~~~~~~~~~~~-----g-----------------~~~~~~~~~~~~~~~---------------~ 148 (335)
T 3n28_A 106 KPGLIVLDMDSTAIQIECIDEIAKLA-----G-----------------VGEEVAEVTERAMQG---------------E 148 (335)
T ss_dssp SCCEEEECSSCHHHHHHHHHHHHHHH-----T-----------------CHHHHHHHHHHHHTT---------------S
T ss_pred CCCEEEEcCCCCCcChHHHHHHHHHc-----C-----------------CchHHHHHHHHHhcC---------------C
Confidence 45699999999999988877776644 1 223333333322211 1
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHH
Q 008479 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLI 421 (564)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I 421 (564)
+++.+. + ..++ ..+++.+.+.+....+.++++||+.++++.++++| +++.|+|++. ..++
T Consensus 149 ~~~~~~------~-------~~~~---~~l~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g---~~~~ivS~~~-~~~~ 208 (335)
T 3n28_A 149 LDFEQS------L-------RLRV---SKLKDAPEQILSQVRETLPLMPELPELVATLHAFG---WKVAIASGGF-TYFS 208 (335)
T ss_dssp SCHHHH------H-------HHHH---HTTTTCBTTHHHHHHTTCCCCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHH
T ss_pred CCHHHH------H-------HHHH---HHhcCCCHHHHHHHHHhCCcCcCHHHHHHHHHHCC---CEEEEEeCCc-HHHH
Confidence 222211 1 1122 34577777778888888999999999999999999 9999999997 8999
Q ss_pred HHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEE
Q 008479 422 RASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 501 (564)
Q Consensus 422 ~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 501 (564)
+.++++.|+ ..+++|.+.+.++.+||.+.+.+..+..|...++.+++..+.+ +.++++||||.||++|+..||+|++
T Consensus 209 ~~~~~~lgl--~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~~lgi~-~~~~v~vGDs~nDi~~a~~aG~~va 285 (335)
T 3n28_A 209 DYLKEQLSL--DYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQYDVE-IHNTVAVGDGANDLVMMAAAGLGVA 285 (335)
T ss_dssp HHHHHHHTC--SEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred HHHHHHcCC--CeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEE
Confidence 999999887 6789999999888889988777777778999999999988763 5789999999999999999999999
Q ss_pred EcCChhHHHH
Q 008479 502 IGSSSSLRRV 511 (564)
Q Consensus 502 ~~~~~~L~~~ 511 (564)
+.+++.+++.
T Consensus 286 ~~~~~~~~~~ 295 (335)
T 3n28_A 286 YHAKPKVEAK 295 (335)
T ss_dssp ESCCHHHHTT
T ss_pred eCCCHHHHhh
Confidence 9777766543
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-14 Score=138.14 Aligned_cols=133 Identities=20% Similarity=0.256 Sum_probs=103.3
Q ss_pred hccCCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccc
Q 008479 370 VLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTG 449 (564)
Q Consensus 370 ~f~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG 449 (564)
.+.|....+..+......+.||..++++.++++| +++.|+|++. ...++..++..++ ..+++|.+...++..+|
T Consensus 59 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~g---~~~~i~T~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 132 (211)
T 1l7m_A 59 LLKDLPIEKVEKAIKRITPTEGAEETIKELKNRG---YVVAVVSGGF-DIAVNKIKEKLGL--DYAFANRLIVKDGKLTG 132 (211)
T ss_dssp TTTTCBHHHHHHHHHTCCBCTTHHHHHHHHHHTT---EEEEEEEEEE-HHHHHHHHHHHTC--SEEEEEEEEEETTEEEE
T ss_pred HhcCCCHHHHHHHHHhCCCCccHHHHHHHHHHCC---CEEEEEcCCc-HHHHHHHHHHcCC--CeEEEeeeEEECCEEcC
Confidence 3467666666666667788999999999999998 9999999986 7788888888776 34667766555544455
Q ss_pred cccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHH
Q 008479 450 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLR 509 (564)
Q Consensus 450 ~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~ 509 (564)
........+.+|...+.++.+..+.+ +.++++||||.||++|+..|++++++++.+.++
T Consensus 133 ~~~~~~~~~~~K~~~l~~~~~~lgi~-~~~~~~iGD~~~Di~~~~~ag~~~~~~~~~~~~ 191 (211)
T 1l7m_A 133 DVEGEVLKENAKGEILEKIAKIEGIN-LEDTVAVGDGANDISMFKKAGLKIAFCAKPILK 191 (211)
T ss_dssp EEECSSCSTTHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHCSEEEEESCCHHHH
T ss_pred CcccCccCCccHHHHHHHHHHHcCCC-HHHEEEEecChhHHHHHHHCCCEEEECCCHHHH
Confidence 54433444678999999999888763 578999999999999999999999998665443
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.56 E-value=7.2e-14 Score=136.67 Aligned_cols=127 Identities=17% Similarity=0.139 Sum_probs=95.0
Q ss_pred HHHHHHH-hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCC-CceeEEeeceeecCcccccccc-
Q 008479 376 LEDIKKA-GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL-NALNVHANEFSFKESISTGEII- 452 (564)
Q Consensus 376 ~~~i~~~-~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~-~~~~I~aN~l~~~~g~~tG~~~- 452 (564)
.+++.++ ...+.+.||+.++++.++++| ++++|+|++. ..+++.+++ |+ +...|++++....++.++|.+.
T Consensus 65 ~~~~~~~~~~~~~~~pg~~~~l~~L~~~g---~~~~ivS~~~-~~~~~~~l~--~l~~~~~v~~~~~~~~~~~~~~~~~k 138 (236)
T 2fea_A 65 KEEITSFVLEDAKIREGFREFVAFINEHE---IPFYVISGGM-DFFVYPLLE--GIVEKDRIYCNHASFDNDYIHIDWPH 138 (236)
T ss_dssp HHHHHHHHHHHCCBCTTHHHHHHHHHHHT---CCEEEEEEEE-HHHHHHHHT--TTSCGGGEEEEEEECSSSBCEEECTT
T ss_pred HHHHHHHHhcCCCCCccHHHHHHHHHhCC---CeEEEEeCCc-HHHHHHHHh--cCCCCCeEEeeeeEEcCCceEEecCC
Confidence 3444444 446899999999999999999 9999999997 889999988 54 3357999998877766666543
Q ss_pred --cc-CC--CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHHHHHhhC
Q 008479 453 --EK-VE--SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFG 516 (564)
Q Consensus 453 --~~-~~--~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~~~~~~g 516 (564)
+. +. ++.+|..+++++. . .+.+++|||||.+|+.++..||+.++. ..+.+.+...|
T Consensus 139 p~p~~~~~~~~~~K~~~~~~~~----~-~~~~~~~vGDs~~Di~~a~~aG~~~~~---~~~~~~~~~~~ 199 (236)
T 2fea_A 139 SCKGTCSNQCGCCKPSVIHELS----E-PNQYIIMIGDSVTDVEAAKLSDLCFAR---DYLLNECREQN 199 (236)
T ss_dssp CCCTTCCSCCSSCHHHHHHHHC----C-TTCEEEEEECCGGGHHHHHTCSEEEEC---HHHHHHHHHTT
T ss_pred CCccccccccCCcHHHHHHHHh----c-cCCeEEEEeCChHHHHHHHhCCeeeec---hHHHHHHHHCC
Confidence 22 22 6789998887763 2 257899999999999999999986653 12344444444
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1e-14 Score=137.09 Aligned_cols=119 Identities=18% Similarity=0.274 Sum_probs=96.8
Q ss_pred hhccCCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCcccc
Q 008479 369 GVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESIST 448 (564)
Q Consensus 369 ~~f~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~t 448 (564)
..+.|.+.+.+.+..+.+.+.||+.++++.++++| ++++|+|++. ...++.+ +..|+ ..+ .+.+.+.++..+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~-~~~~~--~~~-~~~~~~~~~~~~ 132 (201)
T 4ap9_A 61 GLIRGIDEGTFLRTREKVNVSPEARELVETLREKG---FKVVLISGSF-EEVLEPF-KELGD--EFM-ANRAIFEDGKFQ 132 (201)
T ss_dssp HHTTTCBHHHHHHGGGGCCCCHHHHHHHHHHHHTT---CEEEEEEEEE-TTTSGGG-TTTSS--EEE-EEEEEEETTEEE
T ss_pred HHhcCCCHHHHHHHHHhCCCChhHHHHHHHHHHCC---CeEEEEeCCc-HHHHHHH-HHcCc--hhh-eeeEEeeCCceE
Confidence 34678899999999899999999999999999999 9999999987 6777777 77664 344 777776666666
Q ss_pred ccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCCh
Q 008479 449 GEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 506 (564)
Q Consensus 449 G~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~ 506 (564)
| ..+.+..|...++++ . +.++++||||.||+.|+..|++||++++..
T Consensus 133 ~----~~~~~~~k~~~l~~l-~------~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~ 179 (201)
T 4ap9_A 133 G----IRLRFRDKGEFLKRF-R------DGFILAMGDGYADAKMFERADMGIAVGREI 179 (201)
T ss_dssp E----EECCSSCHHHHHGGG-T------TSCEEEEECTTCCHHHHHHCSEEEEESSCC
T ss_pred C----CcCCccCHHHHHHhc-C------cCcEEEEeCCHHHHHHHHhCCceEEECCCC
Confidence 5 233455699888887 1 478999999999999999999999998653
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-12 Score=126.66 Aligned_cols=123 Identities=20% Similarity=0.203 Sum_probs=94.8
Q ss_pred CHHHHHHHhh--cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeec-Cccccccc
Q 008479 375 NLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFK-ESISTGEI 451 (564)
Q Consensus 375 ~~~~i~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~-~g~~tG~~ 451 (564)
..+++.+... ...+.||+.++++.++++| ++++|+|++. ...++.++++.|+...+++++.+.++ ++.++|.-
T Consensus 72 ~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~ 147 (225)
T 1nnl_A 72 SREQVQRLIAEQPPHLTPGIRELVSRLQERN---VQVFLISGGF-RSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFD 147 (225)
T ss_dssp CHHHHHHHHHHSCCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEEC
T ss_pred CHHHHHHHHHhccCCCCccHHHHHHHHHHCC---CcEEEEeCCh-HHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCC
Confidence 3444555443 4789999999999999999 9999999997 88999999998875446888888775 34444432
Q ss_pred c-ccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcC
Q 008479 452 I-EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 504 (564)
Q Consensus 452 ~-~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~ 504 (564)
. ...+.+..|...++.+.+..+. .++++||||.+|+.++..||++|.++.
T Consensus 148 ~~~~~~~~~~Kp~~~~~~~~~~~~---~~~~~vGDs~~Di~~a~~ag~~i~~~~ 198 (225)
T 1nnl_A 148 ETQPTAESGGKGKVIKLLKEKFHF---KKIIMIGDGATDMEACPPADAFIGFGG 198 (225)
T ss_dssp TTSGGGSTTHHHHHHHHHHHHHCC---SCEEEEESSHHHHTTTTTSSEEEEECS
T ss_pred CCCcccCCCchHHHHHHHHHHcCC---CcEEEEeCcHHhHHHHHhCCeEEEecC
Confidence 2 1223345798888888887764 579999999999999999998777753
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.1e-12 Score=135.05 Aligned_cols=135 Identities=17% Similarity=0.196 Sum_probs=104.0
Q ss_pred hhhccCCCHHHHHHHhhc-------------------------CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHH
Q 008479 368 SGVLKGINLEDIKKAGER-------------------------LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIR 422 (564)
Q Consensus 368 ~~~f~Gi~~~~i~~~~~~-------------------------i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~ 422 (564)
..+|+|+|.+++++.++. ..+.|++.++++.|+++| ++++|||++. .++++
T Consensus 99 ~~~~aGmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G---~~v~ivSas~-~~~v~ 174 (327)
T 4as2_A 99 AQVFSGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENG---IEVYVISAAH-EELVR 174 (327)
T ss_dssp HHTTTTSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTT---CEEEEEEEEE-HHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCC---CEEEEEeCCc-HHHHH
Confidence 368899999999987652 258899999999999999 9999999998 89999
Q ss_pred HHHhh----cCCCceeEEeeceeecCcc---------------c----------cccccccCCCCCchHHHHHHHHHHhC
Q 008479 423 ASFSS----AGLNALNVHANEFSFKESI---------------S----------TGEIIEKVESPIDKVQAFNNTLEKYG 473 (564)
Q Consensus 423 ~~l~~----~g~~~~~I~aN~l~~~~g~---------------~----------tG~~~~~~~~g~~K~~~l~~l~~~~~ 473 (564)
++... +|++..+|++.++..+++. + |+....+.+.+..|...+++++..
T Consensus 175 ~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~-- 252 (327)
T 4as2_A 175 MVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDR-- 252 (327)
T ss_dssp HHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCS--
T ss_pred HHHhhcccccCCCHHHeEeeeeeeeccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHhh--
Confidence 99876 6888889999998876432 1 122223456678899999988742
Q ss_pred CCCCccEEEEcCC-ccchhhhhhc----CccEEEcCChhHHH
Q 008479 474 TDRKNLSVYIGDS-VGDLLCLLEA----DIGIVIGSSSSLRR 510 (564)
Q Consensus 474 ~~~~~~viyiGDs-~~Dl~~l~~A----d~giv~~~~~~L~~ 510 (564)
.+..++++||| -||+.||..+ ++++++..+.+.++
T Consensus 253 --g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in~~~~~~e 292 (327)
T 4as2_A 253 --WKRPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKAKYME 292 (327)
T ss_dssp --SCCCSEEEESCHHHHHHHHHHTSCTTCEEEEECCCHHHHH
T ss_pred --CCCCeEEecCCCCCCHHHHhccccCCCeEEEEecCCchHH
Confidence 13468899999 5999999663 45677776655554
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.32 E-value=3.8e-12 Score=120.77 Aligned_cols=114 Identities=17% Similarity=0.150 Sum_probs=84.3
Q ss_pred CHHHHHHHhh---cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeec-Ccccccc
Q 008479 375 NLEDIKKAGE---RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFK-ESISTGE 450 (564)
Q Consensus 375 ~~~~i~~~~~---~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~-~g~~tG~ 450 (564)
..+.+.+..+ ...+.||+.++++.++++| ++++|+|++. ..+++..++..|+....++++.+.+. ++.+++
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 141 (219)
T 3kd3_A 67 TKQSIKEFSNKYCPNLLTDGIKELVQDLKNKG---FEIWIFSGGL-SESIQPFADYLNIPRENIFAVETIWNSDGSFKE- 141 (219)
T ss_dssp BHHHHHHHHHHHTTTTBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEE-
T ss_pred CHHHHHHHHHhhccccCChhHHHHHHHHHHCC---CeEEEEcCCc-HHHHHHHHHHcCCCcccEEEeeeeecCCCceec-
Confidence 3455555443 3568999999999999999 9999999997 89999999998886667899988885 355444
Q ss_pred ccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc
Q 008479 451 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 498 (564)
Q Consensus 451 ~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 498 (564)
+.++.+....|...+.+.. +. .+.++++||||.||++|+. +++
T Consensus 142 ~~~~~~~~~~~~~~l~~~~---~~-~~~~~~~vGD~~~Di~~~~-~G~ 184 (219)
T 3kd3_A 142 LDNSNGACDSKLSAFDKAK---GL-IDGEVIAIGDGYTDYQLYE-KGY 184 (219)
T ss_dssp EECTTSTTTCHHHHHHHHG---GG-CCSEEEEEESSHHHHHHHH-HTS
T ss_pred cCCCCCCcccHHHHHHHHh---CC-CCCCEEEEECCHhHHHHHh-CCC
Confidence 3333344445666665543 22 2578999999999999984 543
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.30 E-value=7.6e-11 Score=111.91 Aligned_cols=123 Identities=20% Similarity=0.231 Sum_probs=93.5
Q ss_pred CCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeec-Cccccccc
Q 008479 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFK-ESISTGEI 451 (564)
Q Consensus 373 Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~-~g~~tG~~ 451 (564)
|++.+++.+..+.+.+.||+.++++.++++ ++++|+|++. ...++.+++..|+ ...+++.+.+. ++..+|..
T Consensus 55 ~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~----~~~~i~s~~~-~~~~~~~l~~~gl--~~~f~~~~~~~~~~~~~~~~ 127 (206)
T 1rku_A 55 GLKLGDIQEVIATLKPLEGAVEFVDWLRER----FQVVILSDTF-YEFSQPLMRQLGF--PTLLCHKLEIDDSDRVVGYQ 127 (206)
T ss_dssp TCCHHHHHHHHTTCCCCTTHHHHHHHHHTT----SEEEEEEEEE-HHHHHHHHHHTTC--CCEEEEEEEECTTSCEEEEE
T ss_pred CCCHHHHHHHHHhcCCCccHHHHHHHHHhc----CcEEEEECCh-HHHHHHHHHHcCC--cceecceeEEcCCceEEeee
Confidence 456777777777889999999999999864 6999999997 8899999999886 35666766663 33233321
Q ss_pred cccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHH
Q 008479 452 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRR 510 (564)
Q Consensus 452 ~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~ 510 (564)
. ..+..|...++++... +.++++||||.+|+.|+..||+++++.+.+.+.+
T Consensus 128 ~---p~p~~~~~~l~~l~~~-----~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~ 178 (206)
T 1rku_A 128 L---RQKDPKRQSVIAFKSL-----YYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIR 178 (206)
T ss_dssp C---CSSSHHHHHHHHHHHT-----TCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHH
T ss_pred c---CCCchHHHHHHHHHhc-----CCEEEEEeCChhhHHHHHhcCccEEECCcHHHHH
Confidence 1 2346788888887542 4689999999999999999999988876655543
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.5e-09 Score=103.84 Aligned_cols=103 Identities=10% Similarity=0.019 Sum_probs=79.6
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCc
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPID 460 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 460 (564)
.....+.||+.++++.++++| ++++|+|.+. ...++.+++..|+.. ..+++.+ ....+..
T Consensus 92 ~~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp 153 (230)
T 3um9_A 92 YLSLTPFADVPQALQQLRAAG---LKTAILSNGS-RHSIRQVVGNSGLTNSFDHLISVD--------------EVRLFKP 153 (230)
T ss_dssp TTSCCBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHHTCGGGCSEEEEGG--------------GTTCCTT
T ss_pred HhcCCCCCCHHHHHHHHHhCC---CeEEEEeCCC-HHHHHHHHHHCCChhhcceeEehh--------------hcccCCC
Confidence 357889999999999999998 9999999986 888999998877532 1122211 1122334
Q ss_pred hHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcC
Q 008479 461 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 504 (564)
Q Consensus 461 K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~ 504 (564)
|...++.+++..+.+ +.++++||||.+|+.|+..+++++++..
T Consensus 154 ~~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 196 (230)
T 3um9_A 154 HQKVYELAMDTLHLG-ESEILFVSCNSWDATGAKYFGYPVCWIN 196 (230)
T ss_dssp CHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCCEEEEC
T ss_pred ChHHHHHHHHHhCCC-cccEEEEeCCHHHHHHHHHCCCEEEEEe
Confidence 678888888888763 5889999999999999999999877743
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.14 E-value=6.1e-10 Score=106.73 Aligned_cols=103 Identities=16% Similarity=0.157 Sum_probs=78.2
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
....+.||+.++++.++++| ++++|+|.+. ...++..++..|+... | +.+.++. ....+..|..
T Consensus 88 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~--------f-~~~~~~~---~~~~~kp~~~ 151 (233)
T 3s6j_A 88 HQIIALPGAVELLETLDKEN---LKWCIATSGG-IDTATINLKALKLDIN--------K-INIVTRD---DVSYGKPDPD 151 (233)
T ss_dssp GGCEECTTHHHHHHHHHHTT---CCEEEECSSC-HHHHHHHHHTTTCCTT--------S-SCEECGG---GSSCCTTSTH
T ss_pred ccCccCCCHHHHHHHHHHCC---CeEEEEeCCc-hhhHHHHHHhcchhhh--------h-heeeccc---cCCCCCCChH
Confidence 45789999999999999998 9999999996 8889999998776321 1 1111111 1122344678
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 503 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~ 503 (564)
.++.+++..+.+ +.++++||||.+|+.|+..+|+ +|.+.
T Consensus 152 ~~~~~~~~l~~~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~ 191 (233)
T 3s6j_A 152 LFLAAAKKIGAP-IDECLVIGDAIWDMLAARRCKATGVGLL 191 (233)
T ss_dssp HHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHTTCEEEEEG
T ss_pred HHHHHHHHhCCC-HHHEEEEeCCHHhHHHHHHCCCEEEEEe
Confidence 888888888763 5889999999999999999998 44553
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=7.3e-09 Score=103.28 Aligned_cols=118 Identities=12% Similarity=0.185 Sum_probs=85.9
Q ss_pred CCCHHHHHHHhh-------cCCCCccHHHHHHHHHHcCCCCC--cEEEEccccCHHHHHHHHhhcCCCceeEEeeceeec
Q 008479 373 GINLEDIKKAGE-------RLSLQDGCTTFFQKVVKNENLNA--NVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFK 443 (564)
Q Consensus 373 Gi~~~~i~~~~~-------~i~lr~G~~efl~~l~~~g~~~~--~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~ 443 (564)
|++.+++.+... .+.+.||+.++++.++++| + ++.|+|.+. ...++..++..|+... |
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g---~~~~l~i~Tn~~-~~~~~~~l~~~gl~~~--------f- 187 (282)
T 3nuq_A 121 KVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSG---KIDKLWLFTNAY-KNHAIRCLRLLGIADL--------F- 187 (282)
T ss_dssp SSCHHHHHHHHTTTSCGGGTCCCCHHHHHHHHHHHHSS---SCSEEEEECSSC-HHHHHHHHHHHTCTTS--------C-
T ss_pred CCCHHHHHHHHhhhhhhhhccCcChhHHHHHHHHHhCC---CCceEEEEECCC-hHHHHHHHHhCCcccc--------c-
Confidence 456666555432 4678999999999999998 9 999999997 8899999988776321 1
Q ss_pred Ccccccccc-ccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 444 ESISTGEII-EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 444 ~g~~tG~~~-~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
+++.++... .....+-.|...++.+++..+.+...++++||||.+|+.|+..||+|++++
T Consensus 188 d~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~ 248 (282)
T 3nuq_A 188 DGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIH 248 (282)
T ss_dssp SEEECCCCSSCSSCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred ceEEEeccCCCcccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEE
Confidence 111111111 111334457889999998888742279999999999999999999976665
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.2e-09 Score=104.49 Aligned_cols=137 Identities=12% Similarity=0.015 Sum_probs=95.4
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchH
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
.....+.||+.++++.+++ + ++++|+|.+. ...++.+++..|+....+++ +. ....+..|.
T Consensus 116 ~~~~~~~~~~~~~l~~l~~-~---~~~~i~s~~~-~~~~~~~l~~~g~~f~~~~~-----------~~---~~~~~kp~~ 176 (254)
T 3umc_A 116 WHRLRPWPDTLAGMHALKA-D---YWLAALSNGN-TALMLDVARHAGLPWDMLLC-----------AD---LFGHYKPDP 176 (254)
T ss_dssp GGSCEECTTHHHHHHHHTT-T---SEEEECCSSC-HHHHHHHHHHHTCCCSEECC-----------HH---HHTCCTTSH
T ss_pred HhcCCCCccHHHHHHHHHh-c---CeEEEEeCCC-HHHHHHHHHHcCCCcceEEe-----------ec---ccccCCCCH
Confidence 3467889999999999986 3 7899999986 88899999887753111111 11 112344578
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHHHHHhhCCceeecCchhHHhHHhhhcCCCCccc
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWK 542 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~~~~~~gi~~~p~~~~~~~~~~~~~~~~~~~~~ 542 (564)
..++.+++..+.+ +.++++|||+.||+.|+..|++++++...+. +.|. .......
T Consensus 177 ~~~~~~~~~lgi~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~------~~g~------------------~~~~~l~ 231 (254)
T 3umc_A 177 QVYLGACRLLDLP-PQEVMLCAAHNYDLKAARALGLKTAFIARPL------EYGP------------------GQSQDLA 231 (254)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTT------TTCT------------------TCCSSSS
T ss_pred HHHHHHHHHcCCC-hHHEEEEcCchHhHHHHHHCCCeEEEEecCC------ccCC------------------CCCcccc
Confidence 8899999888874 5899999999999999999999888865421 1111 0000000
Q ss_pred cccCeEEEeCCHHHHHHhHhC
Q 008479 543 EKSGILYTVSSWAEVHAFILG 563 (564)
Q Consensus 543 ~~~~~ly~~~~W~~i~~~~~~ 563 (564)
...+.-|.+.+..|+..+|.|
T Consensus 232 ~~~~ad~v~~~l~el~~~l~~ 252 (254)
T 3umc_A 232 AEQDWDLIASDLLDLHRQLAA 252 (254)
T ss_dssp CSSCCSEEESSHHHHHHHHHC
T ss_pred cCCCCcEEECCHHHHHHHhcc
Confidence 123456889999999888765
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.3e-09 Score=102.91 Aligned_cols=102 Identities=12% Similarity=0.040 Sum_probs=78.2
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCc
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPID 460 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 460 (564)
.....+.||+.++++.++++| ++++|+|.+. ...++..++..|+.. ..+++.+ ....+..
T Consensus 95 ~~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp 156 (233)
T 3umb_A 95 YACLSAFPENVPVLRQLREMG---LPLGILSNGN-PQMLEIAVKSAGMSGLFDHVLSVD--------------AVRLYKT 156 (233)
T ss_dssp HHSCEECTTHHHHHHHHHTTT---CCEEEEESSC-HHHHHHHHHTTTCTTTCSEEEEGG--------------GTTCCTT
T ss_pred HhcCCCCCCHHHHHHHHHhCC---CcEEEEeCCC-HHHHHHHHHHCCcHhhcCEEEEec--------------ccCCCCc
Confidence 347889999999999999988 9999999986 888999998877632 1222211 1112233
Q ss_pred hHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 461 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 461 K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
|...++.+++..+.+ +.++++||||.+|+.|+..+++++++.
T Consensus 157 ~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~~G~~~~~v 198 (233)
T 3umb_A 157 APAAYALAPRAFGVP-AAQILFVSSNGWDACGATWHGFTTFWI 198 (233)
T ss_dssp SHHHHTHHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHHhCCC-cccEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 567778888877764 589999999999999999999987774
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.3e-09 Score=104.83 Aligned_cols=103 Identities=18% Similarity=0.307 Sum_probs=77.1
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCch
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
....+.||+.++++.++++| ++++|+|.+. ...++..++..|+.. ..+++.+ ....+..|
T Consensus 100 ~~~~~~~~~~~~l~~l~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~~~f~~i~~~~--------------~~~~~Kp~ 161 (231)
T 3kzx_A 100 DNFMLNDGAIELLDTLKENN---ITMAIVSNKN-GERLRSEIHHKNLTHYFDSIIGSG--------------DTGTIKPS 161 (231)
T ss_dssp CCCEECTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEET--------------SSSCCTTS
T ss_pred ccceECcCHHHHHHHHHHCC---CeEEEEECCC-HHHHHHHHHHCCchhheeeEEccc--------------ccCCCCCC
Confidence 36789999999999999998 9999999986 889999999887632 1122211 11122335
Q ss_pred HHHHHHHHHHhCCCCCc-cEEEEcCCccchhhhhhcCc-cEEEcCC
Q 008479 462 VQAFNNTLEKYGTDRKN-LSVYIGDSVGDLLCLLEADI-GIVIGSS 505 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~-~viyiGDs~~Dl~~l~~Ad~-giv~~~~ 505 (564)
...++.+++..+.. +. ++++||||.+|+.|+..||+ +|.+++.
T Consensus 162 ~~~~~~~~~~lgi~-~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~ 206 (231)
T 3kzx_A 162 PEPVLAALTNINIE-PSKEVFFIGDSISDIQSAIEAGCLPIKYGST 206 (231)
T ss_dssp SHHHHHHHHHHTCC-CSTTEEEEESSHHHHHHHHHTTCEEEEECC-
T ss_pred hHHHHHHHHHcCCC-cccCEEEEcCCHHHHHHHHHCCCeEEEECCC
Confidence 57788888887764 45 89999999999999999998 5666533
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.07 E-value=2.1e-09 Score=103.63 Aligned_cols=99 Identities=17% Similarity=0.098 Sum_probs=75.7
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
....+.||+.++++.++++| ++++|+|.+. ...++.+++..|+... | +.+.++. .+..+..|..
T Consensus 101 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~--------f-~~~~~~~---~~~~~kp~~~ 164 (237)
T 4ex6_A 101 GPRLLYPGVLEGLDRLSAAG---FRLAMATSKV-EKAARAIAELTGLDTR--------L-TVIAGDD---SVERGKPHPD 164 (237)
T ss_dssp GGGGBCTTHHHHHHHHHHTT---EEEEEECSSC-HHHHHHHHHHHTGGGT--------C-SEEECTT---TSSSCTTSSH
T ss_pred cCCccCCCHHHHHHHHHhCC---CcEEEEcCCC-hHHHHHHHHHcCchhh--------e-eeEEeCC---CCCCCCCCHH
Confidence 56789999999999999998 9999999986 8889999988775311 0 1111111 1122344678
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
.++.+++..+.+ +.++++||||.+|+.|+..||+.
T Consensus 165 ~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~ 199 (237)
T 4ex6_A 165 MALHVARGLGIP-PERCVVIGDGVPDAEMGRAAGMT 199 (237)
T ss_dssp HHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCe
Confidence 888888888763 58899999999999999999983
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.06 E-value=4.5e-09 Score=101.83 Aligned_cols=112 Identities=13% Similarity=0.047 Sum_probs=82.3
Q ss_pred CCHHHHHHH---hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCcccccc
Q 008479 374 INLEDIKKA---GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGE 450 (564)
Q Consensus 374 i~~~~i~~~---~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~ 450 (564)
++.+.+..+ ...+.+.||+.++++.++++ ++++|+|.+- ...++.+++..|+. |+ .+.++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~~~i~t~~~-~~~~~~~l~~~~~~----------f~-~~~~~~ 163 (254)
T 3umg_A 100 HDSGELDELARAWHVLTPWPDSVPGLTAIKAE----YIIGPLSNGN-TSLLLDMAKNAGIP----------WD-VIIGSD 163 (254)
T ss_dssp SCHHHHHHHHGGGGSCCBCTTHHHHHHHHHHH----SEEEECSSSC-HHHHHHHHHHHTCC----------CS-CCCCHH
T ss_pred CCHHHHHHHHHHHhhCcCCcCHHHHHHHHHhC----CeEEEEeCCC-HHHHHHHHHhCCCC----------ee-EEEEcC
Confidence 344444443 34678899999999999973 6899999885 88899999887753 21 111111
Q ss_pred ccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 451 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 451 ~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
.+..+..|...++.+++..+.+ +.++++||||.||+.|+..||+++++...
T Consensus 164 ---~~~~~kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 214 (254)
T 3umg_A 164 ---INRKYKPDPQAYLRTAQVLGLH-PGEVMLAAAHNGDLEAAHATGLATAFILR 214 (254)
T ss_dssp ---HHTCCTTSHHHHHHHHHHTTCC-GGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred ---cCCCCCCCHHHHHHHHHHcCCC-hHHEEEEeCChHhHHHHHHCCCEEEEEec
Confidence 1122334678888898888774 58999999999999999999998877654
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=2.9e-09 Score=103.26 Aligned_cols=101 Identities=13% Similarity=0.153 Sum_probs=76.7
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeeceeecCccccccccccCCCCCc
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPID 460 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~ 460 (564)
...+.+.||+.++++.++++| ++++|+|.+. ...++.+++..|+... .+++.+ ....+..
T Consensus 101 ~~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~Kp 162 (240)
T 2no4_A 101 YKELSAYPDAAETLEKLKSAG---YIVAILSNGN-DEMLQAALKASKLDRVLDSCLSAD--------------DLKIYKP 162 (240)
T ss_dssp HHTCCBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEGG--------------GTTCCTT
T ss_pred HhcCCCCCCHHHHHHHHHHCC---CEEEEEcCCC-HHHHHHHHHhcCcHHHcCEEEEcc--------------ccCCCCC
Confidence 346789999999999999998 9999999986 8889999998876321 122211 1112234
Q ss_pred hHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEE
Q 008479 461 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 461 K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
|...++.+++..+.+ +.++++||||.+|+.|+..||+.++.
T Consensus 163 ~~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~ 203 (240)
T 2no4_A 163 DPRIYQFACDRLGVN-PNEVCFVSSNAWDLGGAGKFGFNTVR 203 (240)
T ss_dssp SHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHcCCC-cccEEEEeCCHHHHHHHHHCCCEEEE
Confidence 667788888777763 57899999999999999999986554
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.04 E-value=4.8e-09 Score=100.90 Aligned_cols=101 Identities=14% Similarity=0.095 Sum_probs=76.5
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCch
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
....+.||+.++++.++++| ++++|+|.+. ...++.+++..|+.. ..+++.+ ....+-.|
T Consensus 92 ~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~Kp~ 153 (232)
T 1zrn_A 92 LRLAPFSEVPDSLRELKRRG---LKLAILSNGS-PQSIDAVVSHAGLRDGFDHLLSVD--------------PVQVYKPD 153 (232)
T ss_dssp GGCEECTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEESG--------------GGTCCTTS
T ss_pred ccCCCCccHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHhcChHhhhheEEEec--------------ccCCCCCC
Confidence 45788999999999999998 9999999986 888999998877532 1222211 01122335
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
...++.+++..+.+ +.++++||||.+|+.|+..|++++++.
T Consensus 154 ~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~ 194 (232)
T 1zrn_A 154 NRVYELAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWI 194 (232)
T ss_dssp HHHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCC-cccEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 66777777777763 578999999999999999999976664
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.03 E-value=4.7e-09 Score=98.69 Aligned_cols=123 Identities=14% Similarity=0.119 Sum_probs=84.5
Q ss_pred CHHHHHHH-hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccc
Q 008479 375 NLEDIKKA-GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEI 451 (564)
Q Consensus 375 ~~~~i~~~-~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~ 451 (564)
..+.+.+. .+...+.||+.++++.++++| +++|+|.+. ...++.+++..|+.. ..+++.. -
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g----~~~i~s~~~-~~~~~~~l~~~~~~~~f~~~~~~~-----------~ 136 (200)
T 3cnh_A 73 TPEDFRAVMEEQSQPRPEVLALARDLGQRY----RMYSLNNEG-RDLNEYRIRTFGLGEFLLAFFTSS-----------A 136 (200)
T ss_dssp CHHHHHHHHHHTCCBCHHHHHHHHHHTTTS----EEEEEECCC-HHHHHHHHHHHTGGGTCSCEEEHH-----------H
T ss_pred CHHHHHHHHHhcCccCccHHHHHHHHHHcC----CEEEEeCCc-HHHHHHHHHhCCHHHhcceEEeec-----------c
Confidence 44444443 446679999999999998654 899999986 888999998877521 1122211 0
Q ss_pred cccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHHhhCC
Q 008479 452 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGV 517 (564)
Q Consensus 452 ~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~~~gi 517 (564)
...+-.+...++.+++..+.+ +.++++||||.+|+.|+..|+++++.. ....+.+..++.|+
T Consensus 137 ---~~~~Kp~~~~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~~~g~ 199 (200)
T 3cnh_A 137 ---LGVMKPNPAMYRLGLTLAQVR-PEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQLREELAALGV 199 (200)
T ss_dssp ---HSCCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTC
T ss_pred ---cCCCCCCHHHHHHHHHHcCCC-HHHeEEeCCCHHHHHHHHHCCCEEEEECCchhhHHHHHHhcc
Confidence 111222446777777777663 578999999999999999999965554 44556666666665
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=1.3e-09 Score=103.22 Aligned_cols=107 Identities=14% Similarity=0.179 Sum_probs=80.4
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchH
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
.....+.||+.++++.++++| ++++|+|.+. ...++.+++..|+.. .+.+.. +.++. ...+..|.
T Consensus 66 ~~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~--~f~~~~-----i~~~~----~~~~kp~~ 130 (205)
T 3m9l_A 66 AQGSRPAPGAVELVRELAGRG---YRLGILTRNA-RELAHVTLEAIGLAD--CFAEAD-----VLGRD----EAPPKPHP 130 (205)
T ss_dssp EEEEEECTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHTTCGG--GSCGGG-----EECTT----TSCCTTSS
T ss_pred hhcCCCCccHHHHHHHHHhcC---CeEEEEeCCc-hHHHHHHHHHcCchh--hcCcce-----EEeCC----CCCCCCCH
Confidence 456789999999999999998 9999999996 889999999887631 111111 11111 11233456
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEcCC
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS 505 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~~~ 505 (564)
..++.+++..+.+ +.++++||||.+|+.|+..||+ +|+++..
T Consensus 131 ~~~~~~~~~~g~~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~ 173 (205)
T 3m9l_A 131 GGLLKLAEAWDVS-PSRMVMVGDYRFDLDCGRAAGTRTVLVNLP 173 (205)
T ss_dssp HHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEECSSS
T ss_pred HHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCEEEEEeCC
Confidence 7888888887764 5889999999999999999999 8888644
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.03 E-value=1.6e-08 Score=99.10 Aligned_cols=149 Identities=11% Similarity=0.079 Sum_probs=95.0
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
..+.+.||+.++++.++ | ++++|+|.+. ...++.+++..|+... + +.+.++. ....+..|..
T Consensus 90 ~~~~~~~~~~~~l~~l~--g---~~~~i~t~~~-~~~~~~~l~~~gl~~~--f-------~~~~~~~---~~~~~Kp~~~ 151 (253)
T 1qq5_A 90 NRLTPYPDAAQCLAELA--P---LKRAILSNGA-PDMLQALVANAGLTDS--F-------DAVISVD---AKRVFKPHPD 151 (253)
T ss_dssp GSCCBCTTHHHHHHHHT--T---SEEEEEESSC-HHHHHHHHHHTTCGGG--C-------SEEEEGG---GGTCCTTSHH
T ss_pred hcCCCCccHHHHHHHHc--C---CCEEEEeCcC-HHHHHHHHHHCCchhh--c-------cEEEEcc---ccCCCCCCHH
Confidence 35789999999999998 7 8999999986 8889999988775321 1 1111111 1112334667
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC---hhHHHHHHhhCCceeecCchhHHhHHhhhcCCCCc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS---SSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSN 540 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~---~~L~~~~~~~gi~~~p~~~~~~~~~~~~~~~~~~~ 540 (564)
.++.+++..+.+ +.++++||||.+|+.|+..|++++++... ..|++..+ .-++|-..+.-+.. .....
T Consensus 152 ~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~---~g~~~~~~~~~~~~-----~~~~~ 222 (253)
T 1qq5_A 152 SYALVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELV---SGTIAPLTMFKALR-----MREET 222 (253)
T ss_dssp HHHHHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTT---SSSCCHHHHHHHHH-----SSCCT
T ss_pred HHHHHHHHcCCC-HHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcc---cccccccccccccc-----cccCC
Confidence 888888877763 57899999999999999999997766544 33443332 22332221110000 00000
Q ss_pred cccccCeEEEeCCHHHHHHhH
Q 008479 541 WKEKSGILYTVSSWAEVHAFI 561 (564)
Q Consensus 541 ~~~~~~~ly~~~~W~~i~~~~ 561 (564)
...+.-|.+.++.++..+|
T Consensus 223 --~~~~~~~~~~~~~el~~~l 241 (253)
T 1qq5_A 223 --YAEAPDFVVPALGDLPRLV 241 (253)
T ss_dssp --TSCCCSEEESSGGGHHHHH
T ss_pred --CCCCCCeeeCCHHHHHHHH
Confidence 1123457889999988776
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.02 E-value=1.3e-08 Score=97.69 Aligned_cols=102 Identities=17% Similarity=0.194 Sum_probs=77.9
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCch
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
....+.||+.++++.++ +| ++++|+|.+. ...++..++..|+.. ..+++. . ....+..|
T Consensus 104 ~~~~~~~~~~~~l~~l~-~g---~~~~i~sn~~-~~~~~~~l~~~~l~~~f~~~~~~-----------~---~~~~~kp~ 164 (240)
T 3qnm_A 104 TKSGLMPHAKEVLEYLA-PQ---YNLYILSNGF-RELQSRKMRSAGVDRYFKKIILS-----------E---DLGVLKPR 164 (240)
T ss_dssp GCCCBSTTHHHHHHHHT-TT---SEEEEEECSC-HHHHHHHHHHHTCGGGCSEEEEG-----------G---GTTCCTTS
T ss_pred hcCCcCccHHHHHHHHH-cC---CeEEEEeCCc-hHHHHHHHHHcChHhhceeEEEe-----------c---cCCCCCCC
Confidence 35789999999999999 78 9999999986 888899988877531 112211 1 11223446
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCccEEEcCC
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~giv~~~~ 505 (564)
...++.+++..+.+ +.++++||||. +|+.|+..||+++++.+.
T Consensus 165 ~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~ 208 (240)
T 3qnm_A 165 PEIFHFALSATQSE-LRESLMIGDSWEADITGAHGVGMHQAFYNV 208 (240)
T ss_dssp HHHHHHHHHHTTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHcCCC-cccEEEECCCchHhHHHHHHcCCeEEEEcC
Confidence 78888888888764 58999999995 999999999998777644
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.01 E-value=5.8e-09 Score=99.65 Aligned_cols=96 Identities=11% Similarity=0.088 Sum_probs=76.3
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
...+.||+.++++.++++| +++.|+|.+. ...++.+++..|+.. ..+++.+ ....+..|.
T Consensus 84 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp~~ 145 (226)
T 3mc1_A 84 ENKVYDGIEALLSSLKDYG---FHLVVATSKP-TVFSKQILEHFKLAFYFDAIVGSS--------------LDGKLSTKE 145 (226)
T ss_dssp SCCBCTTHHHHHHHHHHHT---CEEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEEC--------------TTSSSCSHH
T ss_pred cCccCcCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHhCCHhheeeeeccC--------------CCCCCCCCH
Confidence 5689999999999999998 9999999986 888999999887632 1122211 112344588
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
..++.+++..+.+ +.++++||||.||+.|+..||+.
T Consensus 146 ~~~~~~~~~lgi~-~~~~i~iGD~~~Di~~a~~aG~~ 181 (226)
T 3mc1_A 146 DVIRYAMESLNIK-SDDAIMIGDREYDVIGALKNNLP 181 (226)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHTTTCC
T ss_pred HHHHHHHHHhCcC-cccEEEECCCHHHHHHHHHCCCC
Confidence 8999999888874 47999999999999999999984
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.99 E-value=6.1e-09 Score=100.84 Aligned_cols=97 Identities=10% Similarity=0.114 Sum_probs=76.6
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
...+.||+.++++.++++| ++++|+|.+. ...++.+++..|+.. ..+++. . ....+..|.
T Consensus 108 ~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~-----------~---~~~~~kp~~ 169 (240)
T 3sd7_A 108 ENKIYENMKEILEMLYKNG---KILLVATSKP-TVFAETILRYFDIDRYFKYIAGS-----------N---LDGTRVNKN 169 (240)
T ss_dssp CCEECTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEE-----------C---TTSCCCCHH
T ss_pred ccccCccHHHHHHHHHHCC---CeEEEEeCCc-HHHHHHHHHHcCcHhhEEEEEec-----------c---ccCCCCCCH
Confidence 5789999999999999998 9999999986 889999999887632 112211 1 112344588
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
..++.+++..+.+.+.++++||||.+|+.|+..||+.
T Consensus 170 ~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~ 206 (240)
T 3sd7_A 170 EVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGID 206 (240)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCE
T ss_pred HHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCC
Confidence 8899999888874258999999999999999999984
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.96 E-value=9.9e-09 Score=97.40 Aligned_cols=103 Identities=16% Similarity=0.141 Sum_probs=75.7
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
....+.||+.++++.++++| ++++|+|.+. ...++..++..++... + +.+.++.. ...+..|..
T Consensus 91 ~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~~~~~--~-------~~~~~~~~---~~~~kp~~~ 154 (226)
T 1te2_A 91 ETRPLLPGVREAVALCKEQG---LLVGLASASP-LHMLEKVLTMFDLRDS--F-------DALASAEK---LPYSKPHPQ 154 (226)
T ss_dssp HHCCBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGG--C-------SEEEECTT---SSCCTTSTH
T ss_pred ccCCcCccHHHHHHHHHHCC---CcEEEEeCCc-HHHHHHHHHhcCcHhh--C-------cEEEeccc---cCCCCCChH
Confidence 35788999999999999988 9999999886 7889999888775321 1 01111110 111122467
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
.++.+++..+.+ ..++++||||.||+.|++.|++++++.
T Consensus 155 ~~~~~~~~~~i~-~~~~i~iGD~~nDi~~a~~aG~~~~~~ 193 (226)
T 1te2_A 155 VYLDCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSIVV 193 (226)
T ss_dssp HHHHHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHcCCEEEEE
Confidence 788888877763 578999999999999999999988773
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.7e-09 Score=101.70 Aligned_cols=100 Identities=12% Similarity=0.082 Sum_probs=76.2
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchHH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
..+.||+.++++.++++| ++++|+|.+. ...++..++..|+.. ..+++.+ ....+..|..
T Consensus 88 ~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp~~~ 149 (214)
T 3e58_A 88 ELIFPDVLKVLNEVKSQG---LEIGLASSSV-KADIFRALEENRLQGFFDIVLSGE--------------EFKESKPNPE 149 (214)
T ss_dssp HHBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEGG--------------GCSSCTTSSH
T ss_pred CCcCchHHHHHHHHHHCC---CCEEEEeCCc-HHHHHHHHHHcCcHhheeeEeecc--------------cccCCCCChH
Confidence 468999999999999998 9999999986 889999999887632 1222211 0112223567
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcC
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 504 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~ 504 (564)
.++.+++..+.+ +.++++||||.+|+.|+..||+++++..
T Consensus 150 ~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 189 (214)
T 3e58_A 150 IYLTALKQLNVQ-ASRALIIEDSEKGIAAGVAADVEVWAIR 189 (214)
T ss_dssp HHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHcCCC-hHHeEEEeccHhhHHHHHHCCCEEEEEC
Confidence 788888877763 5889999999999999999999766653
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.96 E-value=1.8e-08 Score=98.45 Aligned_cols=101 Identities=14% Similarity=0.173 Sum_probs=73.5
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||+.++++.++++| ++++|+|++. ...++.+++..|+... + +.+.++.. .....-|...
T Consensus 112 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~gl~~~--f-------~~~~~~~~---~~~~Kp~~~~ 175 (243)
T 2hsz_A 112 ISRLYPNVKETLEALKAQG---YILAVVTNKP-TKHVQPILTAFGIDHL--F-------SEMLGGQS---LPEIKPHPAP 175 (243)
T ss_dssp SCEECTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHTTCGGG--C-------SEEECTTT---SSSCTTSSHH
T ss_pred cCccCCCHHHHHHHHHHCC---CEEEEEECCc-HHHHHHHHHHcCchhe--E-------EEEEeccc---CCCCCcCHHH
Confidence 5688999999999999998 9999999986 8889999998876321 0 01111110 0111124467
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEE
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
++.+++..+.. +.++++||||.+|+.|+..|+++++.
T Consensus 176 ~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~ 212 (243)
T 2hsz_A 176 FYYLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVG 212 (243)
T ss_dssp HHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHhCcC-hhhEEEEcCCHHHHHHHHHCCCeEEE
Confidence 77777777653 57899999999999999999997444
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.94 E-value=1.7e-09 Score=104.11 Aligned_cols=101 Identities=12% Similarity=0.059 Sum_probs=76.3
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCch
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
....+.||+.++++.++++| +++.|+|.+. ...++.+++..|+.. ..+++.+ .+..+..|
T Consensus 80 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~gl~~~f~~i~~~~--------------~~~~~Kp~ 141 (222)
T 2nyv_A 80 VYTKPYPEIPYTLEALKSKG---FKLAVVSNKL-EELSKKILDILNLSGYFDLIVGGD--------------TFGEKKPS 141 (222)
T ss_dssp SSCEECTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHTTCGGGCSEEECTT--------------SSCTTCCT
T ss_pred ccCccCCCHHHHHHHHHHCC---CeEEEEcCCC-HHHHHHHHHHcCCHHHheEEEecC--------------cCCCCCCC
Confidence 35788999999999999998 9999999986 888999999887531 1122211 11122246
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc-EEEc
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 503 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~~ 503 (564)
...++.+++..+.+ +.++++||||.+|+.|+..||++ |.+.
T Consensus 142 ~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 183 (222)
T 2nyv_A 142 PTPVLKTLEILGEE-PEKALIVGDTDADIEAGKRAGTKTALAL 183 (222)
T ss_dssp THHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEET
T ss_pred hHHHHHHHHHhCCC-chhEEEECCCHHHHHHHHHCCCeEEEEc
Confidence 67778888777663 57899999999999999999986 5554
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.93 E-value=3.9e-09 Score=102.52 Aligned_cols=103 Identities=16% Similarity=0.078 Sum_probs=74.1
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||+.++++.++++| +++.|+|.+. ...+...++. ++.. .++++.. .++. ....+..|...
T Consensus 107 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~-~l~~--~f~~d~i-----~~~~---~~~~~kp~~~~ 171 (243)
T 3qxg_A 107 EAERMPGAWELLQKVKSEG---LTPMVVTGSG-QLSLLERLEH-NFPG--MFHKELM-----VTAF---DVKYGKPNPEP 171 (243)
T ss_dssp CCCBCTTHHHHHHHHHHTT---CEEEEECCCC-CHHHHTTHHH-HSTT--TCCGGGE-----ECTT---TCSSCTTSSHH
T ss_pred cCCCCCCHHHHHHHHHHcC---CcEEEEeCCc-HHHHHHHHHH-hHHH--hcCcceE-----EeHH---hCCCCCCChHH
Confidence 4688999999999999998 9999999886 5677777776 6532 1111111 1111 11223345677
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc-EEEc
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 503 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~~ 503 (564)
++.+++..+.+ +.++++||||.+|+.|+..|+++ |.+.
T Consensus 172 ~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~ 210 (243)
T 3qxg_A 172 YLMALKKGGLK-ADEAVVIENAPLGVEAGHKAGIFTIAVN 210 (243)
T ss_dssp HHHHHHHTTCC-GGGEEEEECSHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCEEEEEe
Confidence 88888887763 58999999999999999999984 4444
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.93 E-value=2.3e-08 Score=98.86 Aligned_cols=102 Identities=15% Similarity=0.168 Sum_probs=73.4
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
.+.+.||+.++++.++++| +++.|+|.+- . .++.+++..|+... | +.+.++. ....+-.+...
T Consensus 104 ~~~~~~~~~~~l~~l~~~g---~~~~i~tn~~-~-~~~~~l~~~gl~~~--------f-~~~~~~~---~~~~~Kp~~~~ 166 (263)
T 3k1z_A 104 TWQVLDGAEDTLRECRTRG---LRLAVISNFD-R-RLEGILGGLGLREH--------F-DFVLTSE---AAGWPKPDPRI 166 (263)
T ss_dssp GEEECTTHHHHHHHHHHTT---CEEEEEESCC-T-THHHHHHHTTCGGG--------C-SCEEEHH---HHSSCTTSHHH
T ss_pred cceECcCHHHHHHHHHhCC---CcEEEEeCCc-H-HHHHHHHhCCcHHh--------h-hEEEeec---ccCCCCCCHHH
Confidence 3578999999999999998 9999999864 3 46888888775311 1 1111111 11122335677
Q ss_pred HHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCccEEEcC
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIGS 504 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~giv~~~ 504 (564)
++..++..+.+ +..+++||||. +|+.|+..||+++++..
T Consensus 167 ~~~~~~~~g~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~~~ 206 (263)
T 3k1z_A 167 FQEALRLAHME-PVVAAHVGDNYLCDYQGPRAVGMHSFLVV 206 (263)
T ss_dssp HHHHHHHHTCC-GGGEEEEESCHHHHTHHHHTTTCEEEEEC
T ss_pred HHHHHHHcCCC-HHHEEEECCCcHHHHHHHHHCCCEEEEEc
Confidence 78888777763 58999999997 99999999999776653
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.92 E-value=5.5e-09 Score=101.06 Aligned_cols=103 Identities=13% Similarity=0.098 Sum_probs=72.3
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||+.++++.++++| +++.|+|.+. ...++..++. |+.. .++++..+ ++. ....+..|...
T Consensus 106 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~-~l~~--~f~~~~~~-----~~~---~~~~~kp~~~~ 170 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEG---LTPMVVTGSG-QTSLLDRLNH-NFPG--IFQANLMV-----TAF---DVKYGKPNPEP 170 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTT---CEEEEECSCC----CHHHHHH-HSTT--TCCGGGEE-----CGG---GCSSCTTSSHH
T ss_pred cCCCCCCHHHHHHHHHHcC---CcEEEEcCCc-hHHHHHHHHh-hHHH--hcCCCeEE-----ecc---cCCCCCCCCHH
Confidence 4688999999999999998 9999999986 6777778877 6532 11111111 111 11223346677
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc-EEEc
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 503 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~~ 503 (564)
++.+++..+.+ +.++++||||.+|+.|+..||++ |.+.
T Consensus 171 ~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~ 209 (247)
T 3dv9_A 171 YLMALKKGGFK-PNEALVIENAPLGVQAGVAAGIFTIAVN 209 (247)
T ss_dssp HHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHcCCC-hhheEEEeCCHHHHHHHHHCCCeEEEEc
Confidence 88888888763 58899999999999999999985 4444
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.92 E-value=1.3e-08 Score=100.12 Aligned_cols=103 Identities=13% Similarity=0.040 Sum_probs=75.5
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||..++++.++++| +++.|+|.+. ...++.+++..++.... | +.+.++. ....+..|...
T Consensus 109 ~~~~~~~~~~~l~~l~~~g---~~~~i~tn~~-~~~~~~~l~~~~~~~~~-------~-~~~~~~~---~~~~~kp~~~~ 173 (277)
T 3iru_A 109 RSQLIPGWKEVFDKLIAQG---IKVGGNTGYG-PGMMAPALIAAKEQGYT-------P-ASTVFAT---DVVRGRPFPDM 173 (277)
T ss_dssp TCCBCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHHHTTCC-------C-SEEECGG---GSSSCTTSSHH
T ss_pred cCccCcCHHHHHHHHHHcC---CeEEEEeCCc-hHHHHHHHHhcCcccCC-------C-ceEecHH---hcCCCCCCHHH
Confidence 5789999999999999998 9999999886 78888888776532110 1 1111111 12233456788
Q ss_pred HHHHHHHhCCCCC-ccEEEEcCCccchhhhhhcCcc-EEEc
Q 008479 465 FNNTLEKYGTDRK-NLSVYIGDSVGDLLCLLEADIG-IVIG 503 (564)
Q Consensus 465 l~~l~~~~~~~~~-~~viyiGDs~~Dl~~l~~Ad~g-iv~~ 503 (564)
++.+++..+.+ + .++++||||.||+.|+..||++ |.+.
T Consensus 174 ~~~~~~~lgi~-~~~~~i~vGD~~~Di~~a~~aG~~~v~v~ 213 (277)
T 3iru_A 174 ALKVALELEVG-HVNGCIKVDDTLPGIEEGLRAGMWTVGVS 213 (277)
T ss_dssp HHHHHHHHTCS-CGGGEEEEESSHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHcCCC-CCccEEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 88888888773 5 7899999999999999999984 4443
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.9e-08 Score=95.39 Aligned_cols=100 Identities=13% Similarity=0.060 Sum_probs=74.7
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeeceeecCccccccccccCCCCCch
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
....+.||+.++++.++++| +++.|+|.+. ...++..++..++... .+++. .. ...+..|
T Consensus 86 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~---~~~~k~~ 147 (225)
T 3d6j_A 86 ANTILFPDTLPTLTHLKKQG---IRIGIISTKY-RFRILSFLRNHMPDDWFDIIIGG-----------ED---VTHHKPD 147 (225)
T ss_dssp GGCEECTTHHHHHHHHHHHT---CEEEEECSSC-HHHHHHHHHTSSCTTCCSEEECG-----------GG---CSSCTTS
T ss_pred ccCccCcCHHHHHHHHHHCC---CeEEEEECCC-HHHHHHHHHHcCchhheeeeeeh-----------hh---cCCCCCC
Confidence 35678899999999999988 8999999885 7889999888775321 11111 10 1122235
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEE
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
...++.+++..+.+ +.++++||||.||+.|+..||+++++
T Consensus 148 ~~~~~~~~~~~~~~-~~~~i~iGD~~nDi~~~~~aG~~~~~ 187 (225)
T 3d6j_A 148 PEGLLLAIDRLKAC-PEEVLYIGDSTVDAGTAAAAGVSFTG 187 (225)
T ss_dssp THHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred hHHHHHHHHHhCCC-hHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 57778888877763 57899999999999999999997665
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.90 E-value=9.3e-09 Score=97.35 Aligned_cols=110 Identities=10% Similarity=0.088 Sum_probs=77.7
Q ss_pred CCHHHHHHHhh--cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhh------cCCCc--eeEEeeceeec
Q 008479 374 INLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS------AGLNA--LNVHANEFSFK 443 (564)
Q Consensus 374 i~~~~i~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~------~g~~~--~~I~aN~l~~~ 443 (564)
.+.+++.+... ...+.||+.++++.+++ | ++++|+|.+. ...++.+++. .|+.. ..+++.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-g---~~~~i~t~~~-~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~---- 144 (211)
T 2i6x_A 74 LTYQQVYDALLGFLEEISAEKFDYIDSLRP-D---YRLFLLSNTN-PYVLDLAMSPRFLPSGRTLDSFFDKVYASC---- 144 (211)
T ss_dssp CCHHHHHHHHGGGEEEECHHHHHHHHHHTT-T---SEEEEEECCC-HHHHHHHTSTTSSTTCCCGGGGSSEEEEHH----
T ss_pred CCHHHHHHHHHHhhcccChHHHHHHHHHHc-C---CeEEEEeCCC-HHHHHHHHhhhccccccCHHHHcCeEEeec----
Confidence 45556555432 35788999999999988 7 9999999986 7888888876 55421 1122111
Q ss_pred CccccccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 444 ESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 444 ~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
....+-.+...++.+++..+.+ +.++++||||.+|+.|+..||+++++.
T Consensus 145 ----------~~~~~Kp~~~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~~~~ 193 (211)
T 2i6x_A 145 ----------QMGKYKPNEDIFLEMIADSGMK-PEETLFIDDGPANVATAERLGFHTYCP 193 (211)
T ss_dssp ----------HHTCCTTSHHHHHHHHHHHCCC-GGGEEEECSCHHHHHHHHHTTCEEECC
T ss_pred ----------ccCCCCCCHHHHHHHHHHhCCC-hHHeEEeCCCHHHHHHHHHcCCEEEEE
Confidence 0111223456777888777763 589999999999999999999976665
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.89 E-value=7.6e-09 Score=103.90 Aligned_cols=116 Identities=15% Similarity=0.158 Sum_probs=79.8
Q ss_pred CCCccHHHHHHHHHHc-CCCCCcEEEEccc---------------------cCHHHHHHHHhhcCCCceeEEee-ceeec
Q 008479 387 SLQDGCTTFFQKVVKN-ENLNANVHVLSYC---------------------WCGDLIRASFSSAGLNALNVHAN-EFSFK 443 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~-g~~~~~~~IvS~g---------------------~s~~~I~~~l~~~g~~~~~I~aN-~l~~~ 443 (564)
...+++.++++.++++ | +++.+.|.. . ...+..++...|+. ..+..+ .+..+
T Consensus 122 ~~~~~v~e~l~~l~~~~g---~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~g~~-~~~~~~~~~~~~ 196 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHN---ILLNPQTQLGKSRYKHNFYYQEQDEINDKKN-LLAIEKICEEYGVS-VNINRCNPLAGD 196 (289)
T ss_dssp CCHHHHHHHHHHHHHHSS---CCCEEGGGTCGGGTTCCEEEECCCHHHHHHH-HHHHHHHHHHHTEE-EEEEECCGGGTC
T ss_pred CCHHHHHHHHHHHHhhhC---ceeeecccccccceEEEEEEeccccccchHH-HHHHHHHHHHcCCC-EEEEEccccccC
Confidence 6678999999999887 7 777787754 2 45667777777642 222222 11100
Q ss_pred -CccccccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC-hhHHHH
Q 008479 444 -ESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRV 511 (564)
Q Consensus 444 -~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~-~~L~~~ 511 (564)
++..++.+. ..+..|...++.+++..+.+ +..+++||||.||+.|+..|++|++++.. +.+++.
T Consensus 197 ~~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~-~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~ 262 (289)
T 3gyg_A 197 PEDSYDVDFI---PIGTGKNEIVTFMLEKYNLN-TERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNL 262 (289)
T ss_dssp CTTEEEEEEE---ESCCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHH
T ss_pred CCCceEEEEE---eCCCCHHHHHHHHHHHcCCC-hhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHh
Confidence 122223322 24567999999999988763 47899999999999999999999999744 445543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.89 E-value=6.3e-08 Score=92.73 Aligned_cols=102 Identities=14% Similarity=0.131 Sum_probs=74.4
Q ss_pred HHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCC
Q 008479 381 KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESP 458 (564)
Q Consensus 381 ~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g 458 (564)
.......+.||+.++++.++++ +++.|+|.+. ...++..++..|+.. ..+++.+ ....+
T Consensus 94 ~~~~~~~~~~~~~~~l~~l~~~----~~~~i~t~~~-~~~~~~~l~~~~~~~~f~~~~~~~--------------~~~~~ 154 (234)
T 3u26_A 94 MSQRYGELYPEVVEVLKSLKGK----YHVGMITDSD-TEQAMAFLDALGIKDLFDSITTSE--------------EAGFF 154 (234)
T ss_dssp HHHHHCCBCTTHHHHHHHHTTT----SEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEHH--------------HHTBC
T ss_pred HHHhhCCcCcCHHHHHHHHHhC----CcEEEEECCC-HHHHHHHHHHcCcHHHcceeEecc--------------ccCCC
Confidence 3344678999999999999753 7899999986 888999998877532 1122211 01122
Q ss_pred CchHHHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCccEEE
Q 008479 459 IDKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVI 502 (564)
Q Consensus 459 ~~K~~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~giv~ 502 (564)
..|...++.+++..+.+ +.++++||||. ||+.|+..||++++.
T Consensus 155 kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~ 198 (234)
T 3u26_A 155 KPHPRIFELALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSIL 198 (234)
T ss_dssp TTSHHHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEE
T ss_pred CcCHHHHHHHHHHcCCC-chhEEEEcCCcHHHHHHHHHcCCEEEE
Confidence 33567788888888764 58999999997 999999999985444
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.88 E-value=2.9e-09 Score=109.68 Aligned_cols=131 Identities=19% Similarity=0.309 Sum_probs=82.7
Q ss_pred cCCCHHHHHHHhhc-CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeec-------
Q 008479 372 KGINLEDIKKAGER-LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFK------- 443 (564)
Q Consensus 372 ~Gi~~~~i~~~~~~-i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~------- 443 (564)
.|....+..+.... ..+.+++.++++.+++ | +++.|+|++. ..++.......++. ..++++.+.++
T Consensus 87 nGa~i~~~~~~~~~~~~~~~~~~~~l~~l~~-g---~~~~i~t~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 160 (332)
T 1y8a_A 87 AGVKNRDVERIAELSAKFVPDAEKAMATLQE-R---WTPVVISTSY-TQYLRRTASMIGVR-GELHGTEVDFDSIAVPEG 160 (332)
T ss_dssp TTCCHHHHHHHHHHHCCBCTTHHHHHHHHHT-T---CEEEEEEEEE-HHHHHHHHHHTTCC-SEEEEEBCCGGGCCCCHH
T ss_pred CCcEEEECCeEeeccCCCHHHHHHHHHHHHc-C---CcEEEEECCc-eEEEcccchhhhhh-hhhcccccchhhhccccc
Confidence 44443333333444 6789999999999998 8 9999999875 66777776665542 23455544332
Q ss_pred ---------Ccccc-------------------ccccc--cCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhh
Q 008479 444 ---------ESIST-------------------GEIIE--KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCL 493 (564)
Q Consensus 444 ---------~g~~t-------------------G~~~~--~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l 493 (564)
++..+ +.+.. ....+.+|...++.+....+ ...+++||||.||++|+
T Consensus 161 ~~k~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~---~~~via~GDs~NDi~ml 237 (332)
T 1y8a_A 161 LREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKG---IDFPVVVGDSISDYKMF 237 (332)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHT---CSSCEEEECSGGGHHHH
T ss_pred cceeEEecCHHHHhhhhHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhc---CceEEEEeCcHhHHHHH
Confidence 11111 11110 22235568888775443211 12399999999999999
Q ss_pred hhc----CccEEEcCChhHHHH
Q 008479 494 LEA----DIGIVIGSSSSLRRV 511 (564)
Q Consensus 494 ~~A----d~giv~~~~~~L~~~ 511 (564)
..| |+||++.+.+.+++.
T Consensus 238 ~~A~~~~g~~vamna~~~lk~~ 259 (332)
T 1y8a_A 238 EAARGLGGVAIAFNGNEYALKH 259 (332)
T ss_dssp HHHHHTTCEEEEESCCHHHHTT
T ss_pred HHHhhcCCeEEEecCCHHHHhh
Confidence 999 999999545555543
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.88 E-value=2e-08 Score=98.38 Aligned_cols=104 Identities=16% Similarity=0.073 Sum_probs=77.3
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCC-CCCchH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVE-SPIDKV 462 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~-~g~~K~ 462 (564)
....+.||+.++++.++++| ++++|+|.+. ...++..++..|+... |+..+.++. ... .+..|.
T Consensus 107 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~--------f~~~i~~~~---~~~~~~Kp~~ 171 (259)
T 4eek_A 107 TGVTAIEGAAETLRALRAAG---VPFAIGSNSE-RGRLHLKLRVAGLTEL--------AGEHIYDPS---WVGGRGKPHP 171 (259)
T ss_dssp TTCEECTTHHHHHHHHHHHT---CCEEEECSSC-HHHHHHHHHHTTCHHH--------HCSCEECGG---GGTTCCTTSS
T ss_pred ccCCcCccHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHhcChHhh--------ccceEEeHh---hcCcCCCCCh
Confidence 56789999999999999998 9999999986 8889999988775310 110011111 111 233456
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc-EEEc
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 503 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~~ 503 (564)
..++.+++..+.+ +.++++||||.+|+.|+..||++ |.+.
T Consensus 172 ~~~~~~~~~lgi~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~ 212 (259)
T 4eek_A 172 DLYTFAAQQLGIL-PERCVVIEDSVTGGAAGLAAGATLWGLL 212 (259)
T ss_dssp HHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCEEEEEc
Confidence 7888888887763 58899999999999999999997 4454
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=2.9e-08 Score=98.23 Aligned_cols=90 Identities=20% Similarity=0.265 Sum_probs=73.2
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHH
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 466 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 466 (564)
.++||..++++.++++| +++.|+|++. ...++.+++..|+. ..+ + ...+.+|...++
T Consensus 144 ~~~~~~~~~l~~l~~~g---~~~~i~T~~~-~~~~~~~~~~~gl~--~~f------~-----------~~~~~~k~~~~k 200 (280)
T 3skx_A 144 RIRPESREAISKLKAIG---IKCMMLTGDN-RFVAKWVAEELGLD--DYF------A-----------EVLPHEKAEKVK 200 (280)
T ss_dssp EECTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCS--EEE------C-----------SCCGGGHHHHHH
T ss_pred CCCHhHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCCh--hHh------H-----------hcCHHHHHHHHH
Confidence 78999999999999998 9999999986 88999999988762 111 1 112336888888
Q ss_pred HHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 467 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 467 ~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
.+.+. .++++||||.||+.|+..||+||+++..
T Consensus 201 ~~~~~------~~~~~vGD~~nDi~~~~~Ag~~va~~~~ 233 (280)
T 3skx_A 201 EVQQK------YVTAMVGDGVNDAPALAQADVGIAIGAG 233 (280)
T ss_dssp HHHTT------SCEEEEECTTTTHHHHHHSSEEEECSCC
T ss_pred HHHhc------CCEEEEeCCchhHHHHHhCCceEEecCC
Confidence 87753 4789999999999999999999999743
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.86 E-value=1.6e-08 Score=93.97 Aligned_cols=105 Identities=15% Similarity=0.146 Sum_probs=74.0
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||+.++++.++++| ++++|+|.+- ..++..++..++... + . .+.++. ....+..|...
T Consensus 80 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~--~~~~~~l~~~~~~~~--f----~---~~~~~~---~~~~~kp~~~~ 142 (190)
T 2fi1_A 80 HPILFEGVSDLLEDISNQG---GRHFLVSHRN--DQVLEILEKTSIAAY--F----T---EVVTSS---SGFKRKPNPES 142 (190)
T ss_dssp SCCBCTTHHHHHHHHHHTT---CEEEEECSSC--THHHHHHHHTTCGGG--E----E---EEECGG---GCCCCTTSCHH
T ss_pred cCccCcCHHHHHHHHHHCC---CcEEEEECCc--HHHHHHHHHcCCHhh--e----e---eeeecc---ccCCCCCCHHH
Confidence 3348999999999999998 9999999763 468888888775321 1 0 011111 11122345677
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcC-ChhHH
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLR 509 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~-~~~L~ 509 (564)
++.+++..+.+ ++++||||.||+.|+..|+++++... ...++
T Consensus 143 ~~~~~~~~~~~---~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~ 185 (190)
T 2fi1_A 143 MLYLREKYQIS---SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLR 185 (190)
T ss_dssp HHHHHHHTTCS---SEEEEESSHHHHHHHHHTTCEEEECSCHHHHH
T ss_pred HHHHHHHcCCC---eEEEEcCCHHHHHHHHHcCCeEEEECCCCChh
Confidence 88888887763 89999999999999999999766653 34444
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.85 E-value=8.8e-08 Score=92.83 Aligned_cols=101 Identities=11% Similarity=0.156 Sum_probs=75.0
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||+.++++.++++| ++++|+|.+. ...++..++..|+... | +.+.++.. ...+-.|...
T Consensus 92 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~~--------f-~~~~~~~~---~~~~Kp~~~~ 155 (241)
T 2hoq_A 92 YLREVPGARKVLIRLKELG---YELGIITDGN-PVKQWEKILRLELDDF--------F-EHVIISDF---EGVKKPHPKI 155 (241)
T ss_dssp HCCBCTTHHHHHHHHHHHT---CEEEEEECSC-HHHHHHHHHHTTCGGG--------C-SEEEEGGG---GTCCTTCHHH
T ss_pred hCCCCccHHHHHHHHHHCC---CEEEEEECCC-chhHHHHHHHcCcHhh--------c-cEEEEeCC---CCCCCCCHHH
Confidence 4678999999999999998 9999999886 8889999988876321 0 11111111 1122335677
Q ss_pred HHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCccEEE
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVI 502 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~giv~ 502 (564)
++.+++..+.+ +.++++||||. ||+.|+..||++++.
T Consensus 156 ~~~~~~~~g~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~ 193 (241)
T 2hoq_A 156 FKKALKAFNVK-PEEALMVGDRLYSDIYGAKRVGMKTVW 193 (241)
T ss_dssp HHHHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCC-cccEEEECCCchHhHHHHHHCCCEEEE
Confidence 88888877763 57899999998 999999999996554
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.84 E-value=1.6e-08 Score=98.54 Aligned_cols=107 Identities=13% Similarity=0.139 Sum_probs=73.1
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhc-CCCceeEEeeceeecCccccccccccCCCCCch
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSA-GLNALNVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~-g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
.....+.||+.++++.++++| +++.|+|.+. ...+...+.+. |+... | +.+.++. ......+-.|
T Consensus 108 ~~~~~~~~~~~~~l~~l~~~g---~~~~i~sn~~-~~~~~~~l~~~~~l~~~--------f-~~~~~~~-~~~~~~~Kp~ 173 (250)
T 3l5k_A 108 FPTAALMPGAEKLIIHLRKHG---IPFALATSSR-SASFDMKTSRHKEFFSL--------F-SHIVLGD-DPEVQHGKPD 173 (250)
T ss_dssp GGGCCBCTTHHHHHHHHHHTT---CCEEEECSCC-HHHHHHHTTTCHHHHTT--------S-SCEECTT-CTTCCSCTTS
T ss_pred hccCCCCCCHHHHHHHHHhCC---CcEEEEeCCC-HHHHHHHHHhccCHHhh--------e-eeEEecc-hhhccCCCCC
Confidence 346889999999999999998 9999999986 67777666432 32100 0 1111111 0011223335
Q ss_pred HHHHHHHHHHhCCCC-CccEEEEcCCccchhhhhhcCccEEEc
Q 008479 462 VQAFNNTLEKYGTDR-KNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~-~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
...++.+++..+... +.++++||||.+|+.|+..||++++.-
T Consensus 174 ~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v 216 (250)
T 3l5k_A 174 PDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMV 216 (250)
T ss_dssp THHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred hHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 677888888777631 289999999999999999999865553
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.83 E-value=8.9e-09 Score=98.92 Aligned_cols=101 Identities=10% Similarity=0.036 Sum_probs=69.7
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 465 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 465 (564)
..+.||+.++++.++++| +++.|+|.+- . ++.+++..|+... | +.+.++.- ...+..|...+
T Consensus 91 ~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~--~~~~l~~~gl~~~--------f-~~i~~~~~---~~~~Kp~~~~~ 152 (233)
T 3nas_A 91 EDLLPGIGRLLCQLKNEN---IKIGLASSSR-N--APKILRRLAIIDD--------F-HAIVDPTT---LAKGKPDPDIF 152 (233)
T ss_dssp GGSCTTHHHHHHHHHHTT---CEEEECCSCT-T--HHHHHHHTTCTTT--------C-SEECCC------------CCHH
T ss_pred CCcCcCHHHHHHHHHHCC---CcEEEEcCch-h--HHHHHHHcCcHhh--------c-CEEeeHhh---CCCCCCChHHH
Confidence 348999999999999998 9999999873 2 7788888775321 0 01111110 11122234567
Q ss_pred HHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 466 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 466 ~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
+.+++..+.+ +.++++||||.||+.|+..||+++++.+.
T Consensus 153 ~~~~~~lgi~-~~~~i~vGDs~~Di~~a~~aG~~~~~~~~ 191 (233)
T 3nas_A 153 LTAAAMLDVS-PADCAAIEDAEAGISAIKSAGMFAVGVGQ 191 (233)
T ss_dssp HHHHHHHTSC-GGGEEEEECSHHHHHHHHHTTCEEEECC-
T ss_pred HHHHHHcCCC-HHHEEEEeCCHHHHHHHHHcCCEEEEECC
Confidence 7777777763 58999999999999999999998888744
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=98.82 E-value=6.4e-09 Score=97.94 Aligned_cols=121 Identities=10% Similarity=0.096 Sum_probs=77.4
Q ss_pred CCHHHHHHHhh--cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhh-cCCCc--eeEEeeceeecCcccc
Q 008479 374 INLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-AGLNA--LNVHANEFSFKESIST 448 (564)
Q Consensus 374 i~~~~i~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~-~g~~~--~~I~aN~l~~~~g~~t 448 (564)
.+.+++.+... ...+.||+.++++.++++| ++++|+|.+. ...++.++.. .|+.. ..+++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~~~~~~~l~~~f~~~~~~~--------- 142 (206)
T 2b0c_A 76 LSYEQFSHGWQAVFVALRPEVIAIMHKLREQG---HRVVVLSNTN-RLHTTFWPEEYPEIRDAADHIYLSQ--------- 142 (206)
T ss_dssp CCHHHHHHHHHTCEEEECHHHHHHHHHHHHTT---CEEEEEECCC-CCTTSCCGGGCHHHHHHCSEEEEHH---------
T ss_pred CCHHHHHHHHHHHhcccCccHHHHHHHHHHCC---CeEEEEECCC-hHHHHHHHHhccChhhheeeEEEec---------
Confidence 45555555433 3678999999999999988 9999999875 4454444433 23210 1122211
Q ss_pred ccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEE-cCChhHHHHHH
Q 008479 449 GEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI-GSSSSLRRVGS 513 (564)
Q Consensus 449 G~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~-~~~~~L~~~~~ 513 (564)
. ...+-.+...++.+++..+.+ +.++++||||.+|+.++..+|++++. .+...+++..+
T Consensus 143 --~---~~~~Kp~~~~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 202 (206)
T 2b0c_A 143 --D---LGMRKPEARIYQHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDYFA 202 (206)
T ss_dssp --H---HTCCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCSTTHHHHHHH
T ss_pred --c---cCCCCCCHHHHHHHHHHcCCC-HHHeEEeCCCHHHHHHHHHcCCeEEEecCCchHHHHHH
Confidence 0 001112345677777777663 57899999999999999999996555 45555554443
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.82 E-value=2.7e-08 Score=92.66 Aligned_cols=100 Identities=14% Similarity=0.153 Sum_probs=71.9
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeeceeecCccccccccccCCCCCch
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
....+.||+.++++.++++| +++.|+|.+. ...++ .++..++... .+++.. . ...+..+
T Consensus 82 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~-~~~~~~~~~~f~~~~~~~----------~----~~~~Kp~ 142 (207)
T 2go7_A 82 AQVVLMPGAREVLAWADESG---IQQFIYTHKG-NNAFT-ILKDLGVESYFTEILTSQ----------S----GFVRKPS 142 (207)
T ss_dssp GGCEECTTHHHHHHHHHHTT---CEEEEECSSC-THHHH-HHHHHTCGGGEEEEECGG----------G----CCCCTTS
T ss_pred ccceeCcCHHHHHHHHHHCC---CeEEEEeCCc-hHHHH-HHHHcCchhheeeEEecC----------c----CCCCCCC
Confidence 45678999999999999988 9999999986 67777 8877665321 111111 0 0011122
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc-EEEc
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 503 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~~ 503 (564)
...++.+++..+.+ +.++++||||.||+.|+..|+++ ++++
T Consensus 143 ~~~~~~~~~~~~i~-~~~~~~iGD~~nDi~~~~~aG~~~i~~~ 184 (207)
T 2go7_A 143 PEAATYLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFL 184 (207)
T ss_dssp SHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESS
T ss_pred cHHHHHHHHHhCCC-cccEEEECCCHHHHHHHHHCCCeEEEEe
Confidence 56777777777763 57899999999999999999997 4454
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.81 E-value=7.2e-08 Score=93.71 Aligned_cols=100 Identities=12% Similarity=0.101 Sum_probs=75.0
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCC-ceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN-ALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~-~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
...+.||+.++++.++++| +++.|+|.+. ...++..+++.|+. ...+++.+- ...+-.|..
T Consensus 108 ~~~~~~g~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~f~~~~~~~~--------------~~~~Kp~p~ 169 (240)
T 2hi0_A 108 KTGPFPGILDLMKNLRQKG---VKLAVVSNKP-NEAVQVLVEELFPGSFDFALGEKS--------------GIRRKPAPD 169 (240)
T ss_dssp SCEECTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHHSTTTCSEEEEECT--------------TSCCTTSSH
T ss_pred cCCcCCCHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCCcceeEEEecCC--------------CCCCCCCHH
Confidence 4678899999999999998 9999999986 78889999887753 122332220 112334667
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc-EEEc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 503 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~~ 503 (564)
.+...++..+.+ +.++++||||.+|+.|+..|++. |.+.
T Consensus 170 ~~~~~~~~l~~~-~~~~~~vGDs~~Di~~a~~aG~~~v~v~ 209 (240)
T 2hi0_A 170 MTSECVKVLGVP-RDKCVYIGDSEIDIQTARNSEMDEIAVN 209 (240)
T ss_dssp HHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEC
Confidence 777888777763 58999999999999999999984 3443
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=98.79 E-value=3.4e-08 Score=95.14 Aligned_cols=119 Identities=14% Similarity=0.090 Sum_probs=78.2
Q ss_pred CCHHHHHHHhhcC--CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHH------hhcCCCceeEEeeceeecCc
Q 008479 374 INLEDIKKAGERL--SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASF------SSAGLNALNVHANEFSFKES 445 (564)
Q Consensus 374 i~~~~i~~~~~~i--~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l------~~~g~~~~~I~aN~l~~~~g 445 (564)
.+.+++.+..... .+.||+.++++.++++ ++++|+|.+. ...++.++ +..|+.. . | +.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~~~i~Sn~~-~~~~~~~~~~l~~~~~~~l~~--~------f-d~ 162 (229)
T 4dcc_A 97 VSDKQIDAAWNSFLVDIPTYKLDLLLKLREK----YVVYLLSNTN-DIHWKWVCKNAFPYRTFKVED--Y------F-EK 162 (229)
T ss_dssp CCHHHHHHHHHTTBCCCCHHHHHHHHHHTTT----SEEEEEECCC-HHHHHHHHHHTSCBTTBCHHH--H------C-SE
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHhc----CcEEEEECCC-hHHHHHHHhhhhhhccCCHHH--h------C-CE
Confidence 4667777665433 5789999999999853 7999999986 78887555 4444211 0 0 11
Q ss_pred cccccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHH
Q 008479 446 ISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRR 510 (564)
Q Consensus 446 ~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~ 510 (564)
++++. ....+--+...++..++..+.+ +.++++||||.+|+.++..||++++.. +...+++
T Consensus 163 i~~~~---~~~~~KP~~~~~~~~~~~~g~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~ 224 (229)
T 4dcc_A 163 TYLSY---EMKMAKPEPEIFKAVTEDAGID-PKETFFIDDSEINCKVAQELGISTYTPKAGEDWSH 224 (229)
T ss_dssp EEEHH---HHTCCTTCHHHHHHHHHHHTCC-GGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGG
T ss_pred EEeec---ccCCCCCCHHHHHHHHHHcCCC-HHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHH
Confidence 11111 0111122447788888877763 589999999999999999999975554 4444443
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.78 E-value=1.1e-07 Score=91.03 Aligned_cols=104 Identities=16% Similarity=0.196 Sum_probs=73.2
Q ss_pred hcCCCCccHHHHHHHHHHc-CCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchH
Q 008479 384 ERLSLQDGCTTFFQKVVKN-ENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~-g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
....+.||+.++++.++++ | +++.|+|++. ...++..++..|+... +. ...+|.-.. ..+..+.
T Consensus 90 ~~~~~~~~~~~~l~~l~~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~~--f~-------~~~~~~~~~--~~~k~~~ 154 (234)
T 2hcf_A 90 EDITLLEGVRELLDALSSRSD---VLLGLLTGNF-EASGRHKLKLPGIDHY--FP-------FGAFADDAL--DRNELPH 154 (234)
T ss_dssp GGEEECTTHHHHHHHHHTCTT---EEEEEECSSC-HHHHHHHHHTTTCSTT--CS-------CEECTTTCS--SGGGHHH
T ss_pred CCCCcCCCHHHHHHHHHhCCC---ceEEEEcCCc-HHHHHHHHHHCCchhh--cC-------cceecCCCc--CccchHH
Confidence 3567899999999999998 8 9999999986 8889999988775321 11 011111000 0111234
Q ss_pred HHHHHHHHHhC--CCCCccEEEEcCCccchhhhhhcCcc-EEEc
Q 008479 463 QAFNNTLEKYG--TDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 503 (564)
Q Consensus 463 ~~l~~l~~~~~--~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~~ 503 (564)
..++.+.+..+ . .+.++++||||.||+.|+..||++ +.+.
T Consensus 155 ~~~~~~~~~lg~~~-~~~~~i~iGD~~~Di~~a~~aG~~~i~v~ 197 (234)
T 2hcf_A 155 IALERARRMTGANY-SPSQIVIIGDTEHDIRCARELDARSIAVA 197 (234)
T ss_dssp HHHHHHHHHHCCCC-CGGGEEEEESSHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHHHhCCCC-CcccEEEECCCHHHHHHHHHCCCcEEEEc
Confidence 56677777776 4 357999999999999999999986 4443
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.77 E-value=3.4e-07 Score=87.01 Aligned_cols=96 Identities=11% Similarity=0.043 Sum_probs=74.6
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
...+.||..++++.++++| .++++|+|.+. ...++..++..|+... .+++ .+..|.
T Consensus 103 ~~~~~~~~~~~l~~l~~~g--~~~~~i~t~~~-~~~~~~~l~~~~~~~~f~~~~~-------------------~~kpk~ 160 (234)
T 3ddh_A 103 PIELLPGVKETLKTLKETG--KYKLVVATKGD-LLDQENKLERSGLSPYFDHIEV-------------------MSDKTE 160 (234)
T ss_dssp CCCBCTTHHHHHHHHHHHC--CCEEEEEEESC-HHHHHHHHHHHTCGGGCSEEEE-------------------ESCCSH
T ss_pred cCCcCccHHHHHHHHHhCC--CeEEEEEeCCc-hHHHHHHHHHhCcHhhhheeee-------------------cCCCCH
Confidence 5789999999999999753 16899999775 7888888888775211 1111 122488
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCccEEEc
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIG 503 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~giv~~ 503 (564)
..++.+++..+.+ +.++++||||. ||+.|+..|++++++-
T Consensus 161 ~~~~~~~~~lgi~-~~~~i~iGD~~~~Di~~a~~aG~~~v~v 201 (234)
T 3ddh_A 161 KEYLRLLSILQIA-PSELLMVGNSFKSDIQPVLSLGGYGVHI 201 (234)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESCCCCCCHHHHHHTCEEEEC
T ss_pred HHHHHHHHHhCCC-cceEEEECCCcHHHhHHHHHCCCeEEEe
Confidence 8999999888874 58999999996 9999999999977764
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=98.77 E-value=6.1e-08 Score=92.24 Aligned_cols=98 Identities=12% Similarity=0.058 Sum_probs=72.6
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
...+.||+.++++.++++| +++.|+|.+. ...+...++..|+... .+++.+ ....+--+.
T Consensus 82 ~~~~~pg~~~~l~~L~~~g---~~~~i~tn~~-~~~~~~~l~~~~l~~~fd~~~~~~--------------~~~~~KP~p 143 (216)
T 3kbb_A 82 LLKENPGVREALEFVKSKR---IKLALATSTP-QREALERLRRLDLEKYFDVMVFGD--------------QVKNGKPDP 143 (216)
T ss_dssp HCCBCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHTTCGGGCSEEECGG--------------GSSSCTTST
T ss_pred hcccCccHHHHHHHHHHcC---CCcccccCCc-HHHHHHHHHhcCCCcccccccccc--------------ccCCCcccH
Confidence 5678999999999999999 9999999986 8889999988876321 111111 011111234
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 501 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 501 (564)
..++..++..+. .+.++++||||.+|+.+...||+..+
T Consensus 144 ~~~~~a~~~lg~-~p~e~l~VgDs~~Di~aA~~aG~~~i 181 (216)
T 3kbb_A 144 EIYLLVLERLNV-VPEKVVVFEDSKSGVEAAKSAGIERI 181 (216)
T ss_dssp HHHHHHHHHHTC-CGGGEEEEECSHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHhhCC-CccceEEEecCHHHHHHHHHcCCcEE
Confidence 567777777776 35899999999999999999998543
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.77 E-value=3.7e-08 Score=93.80 Aligned_cols=93 Identities=11% Similarity=0.086 Sum_probs=72.7
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
...+.||+.++++.+++ | +++.|+|.+. ...++..+++.|+.. ..|++.+ ..+-.|.
T Consensus 82 ~~~~~~g~~~~l~~L~~-~---~~l~i~T~~~-~~~~~~~l~~~gl~~~f~~i~~~~----------------~~~Kp~p 140 (210)
T 2ah5_A 82 EAQLFPQIIDLLEELSS-S---YPLYITTTKD-TSTAQDMAKNLEIHHFFDGIYGSS----------------PEAPHKA 140 (210)
T ss_dssp SCEECTTHHHHHHHHHT-T---SCEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEEC----------------SSCCSHH
T ss_pred CCCCCCCHHHHHHHHHc-C---CeEEEEeCCC-HHHHHHHHHhcCchhheeeeecCC----------------CCCCCCh
Confidence 46788999999999998 8 9999999886 778899998887632 1222211 1233477
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
..++..++..+.+ +.++++||||.+|+.++..||+.
T Consensus 141 ~~~~~~~~~lg~~-p~~~~~vgDs~~Di~~a~~aG~~ 176 (210)
T 2ah5_A 141 DVIHQALQTHQLA-PEQAIIIGDTKFDMLGARETGIQ 176 (210)
T ss_dssp HHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCE
T ss_pred HHHHHHHHHcCCC-cccEEEECCCHHHHHHHHHCCCc
Confidence 8888888887763 58999999999999999999984
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.76 E-value=3.9e-08 Score=93.16 Aligned_cols=102 Identities=12% Similarity=0.104 Sum_probs=72.0
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||+.++++.++++| +++.|+|.+ ..++.+++..++... | +.+.++.. ...+-.|...
T Consensus 89 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~---~~~~~~l~~~~l~~~--------f-~~~~~~~~---~~~~Kp~~~~ 150 (221)
T 2wf7_A 89 PADVYPGILQLLKDLRSNK---IKIALASAS---KNGPFLLERMNLTGY--------F-DAIADPAE---VAASKPAPDI 150 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTT---CEEEECCCC---TTHHHHHHHTTCGGG--------C-SEECCTTT---SSSCTTSSHH
T ss_pred CCCCCCCHHHHHHHHHHCC---CeEEEEcCc---HHHHHHHHHcChHHH--------c-ceEecccc---CCCCCCChHH
Confidence 3578899999999999988 999999986 346677777664211 1 11111111 1111224457
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
++.+++..+.+ +.++++||||.||+.|+..||+++++.+.
T Consensus 151 ~~~~~~~lgi~-~~~~i~iGD~~nDi~~a~~aG~~~~~~~~ 190 (221)
T 2wf7_A 151 FIAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGVGR 190 (221)
T ss_dssp HHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHcCCC-hhHeEEEeCCHHHHHHHHHCCCEEEEECC
Confidence 77888877763 58999999999999999999998887644
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.7e-07 Score=89.38 Aligned_cols=99 Identities=18% Similarity=0.163 Sum_probs=73.1
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
.+.||+.++++.++++| +++.|+|.+- ....++..++..|+.. ..+++.+ ....+..|.
T Consensus 99 ~~~~~~~~~l~~l~~~g---~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp~~ 161 (235)
T 2om6_A 99 LVLEGTKEALQFVKERG---LKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFAD--------------EVLSYKPRK 161 (235)
T ss_dssp GBCTTHHHHHHHHHHTT---CEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHH--------------HHTCCTTCH
T ss_pred CcCccHHHHHHHHHHCC---CEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheecc--------------ccCCCCCCH
Confidence 46999999999999988 9999999862 1677888888877532 1122111 011122356
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCccEEEc
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIG 503 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~giv~~ 503 (564)
..++.+++..+.+ +.++++||||. ||+.|+..||+++++.
T Consensus 162 ~~~~~~~~~lgi~-~~~~~~iGD~~~nDi~~a~~aG~~~~~~ 202 (235)
T 2om6_A 162 EMFEKVLNSFEVK-PEESLHIGDTYAEDYQGARKVGMWAVWI 202 (235)
T ss_dssp HHHHHHHHHTTCC-GGGEEEEESCTTTTHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHcCCC-ccceEEECCChHHHHHHHHHCCCEEEEE
Confidence 7888888887764 58999999999 9999999999987774
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.74 E-value=4.5e-08 Score=92.56 Aligned_cols=100 Identities=17% Similarity=0.264 Sum_probs=73.4
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCch--
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK-- 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K-- 461 (564)
....+.||+.++++.+++ . +++.|+|.+. ...++.+++..|+... + + .+.++. ..+..|
T Consensus 80 ~~~~~~~~~~~~l~~l~~---~-~~~~i~s~~~-~~~~~~~l~~~~l~~~--f------~-~~~~~~-----~~~~~KP~ 140 (209)
T 2hdo_A 80 DQIELYPGITSLFEQLPS---E-LRLGIVTSQR-RNELESGMRSYPFMMR--M------A-VTISAD-----DTPKRKPD 140 (209)
T ss_dssp GGCEECTTHHHHHHHSCT---T-SEEEEECSSC-HHHHHHHHTTSGGGGG--E------E-EEECGG-----GSSCCTTS
T ss_pred ccCCcCCCHHHHHHHHHh---c-CcEEEEeCCC-HHHHHHHHHHcChHhh--c------c-EEEecC-----cCCCCCCC
Confidence 457889999999998875 2 7899999986 8889999988765211 1 0 111111 123346
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
...++.+++..+.+ +.++++||||.+|+.|+..||+++++.
T Consensus 141 ~~~~~~~~~~~~~~-~~~~i~vGD~~~Di~~a~~aG~~~~~~ 181 (209)
T 2hdo_A 141 PLPLLTALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLA 181 (209)
T ss_dssp SHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred cHHHHHHHHHcCCC-cccEEEECCChhhHHHHHHcCCeEEEE
Confidence 67778888777763 588999999999999999999987764
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.73 E-value=5.2e-08 Score=95.76 Aligned_cols=101 Identities=13% Similarity=0.058 Sum_probs=73.0
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
....+.||+.++++.++++| +++.|+|.+. ...++.+++..|+... +.+.+.++.. ...+..|..
T Consensus 100 ~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~~~~~--------~~~~~~~~~~---~~~~kp~~~ 164 (267)
T 1swv_A 100 RYASPINGVKEVIASLRERG---IKIGSTTGYT-REMMDIVAKEAALQGY--------KPDFLVTPDD---VPAGRPYPW 164 (267)
T ss_dssp GGCCBCTTHHHHHHHHHHTT---CEEEEBCSSC-HHHHHHHHHHHHHTTC--------CCSCCBCGGG---SSCCTTSSH
T ss_pred cccccCccHHHHHHHHHHcC---CeEEEEcCCC-HHHHHHHHHHcCCccc--------ChHheecCCc---cCCCCCCHH
Confidence 35678899999999999988 9999999885 7888888876553211 0011222221 122345778
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
.++.+++..+.+.+.++++||||.||+.|+..||++
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~ 200 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMW 200 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCE
Confidence 888888888764227899999999999999999974
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.71 E-value=5.1e-07 Score=86.41 Aligned_cols=100 Identities=17% Similarity=0.201 Sum_probs=73.5
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||..++++.++++ +++.|+|.+. ...++..++..|+... | +.+.++. ....+-.|...
T Consensus 101 ~~~~~~~~~~~l~~l~~~----~~~~i~t~~~-~~~~~~~l~~~~l~~~--------f-~~~~~~~---~~~~~kp~~~~ 163 (238)
T 3ed5_A 101 GHQLIDGAFDLISNLQQQ----FDLYIVTNGV-SHTQYKRLRDSGLFPF--------F-KDIFVSE---DTGFQKPMKEY 163 (238)
T ss_dssp CCCBCTTHHHHHHHHHTT----SEEEEEECSC-HHHHHHHHHHTTCGGG--------C-SEEEEGG---GTTSCTTCHHH
T ss_pred cCCCCccHHHHHHHHHhc----CeEEEEeCCC-HHHHHHHHHHcChHhh--------h-heEEEec---ccCCCCCChHH
Confidence 578999999999999863 7899999886 8889999988775321 0 1111111 11123346788
Q ss_pred HHHHHHHhC-CCCCccEEEEcCCc-cchhhhhhcCccEEE
Q 008479 465 FNNTLEKYG-TDRKNLSVYIGDSV-GDLLCLLEADIGIVI 502 (564)
Q Consensus 465 l~~l~~~~~-~~~~~~viyiGDs~-~Dl~~l~~Ad~giv~ 502 (564)
++.+++..+ . .+.++++||||. +|+.|+..||++.+.
T Consensus 164 ~~~~~~~~g~~-~~~~~i~vGD~~~~Di~~a~~aG~~~i~ 202 (238)
T 3ed5_A 164 FNYVFERIPQF-SAEHTLIIGDSLTADIKGGQLAGLDTCW 202 (238)
T ss_dssp HHHHHHTSTTC-CGGGEEEEESCTTTTHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCC-ChhHeEEECCCcHHHHHHHHHCCCEEEE
Confidence 888888877 5 358999999998 999999999995443
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.71 E-value=1.3e-07 Score=90.34 Aligned_cols=103 Identities=13% Similarity=0.027 Sum_probs=69.3
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchH
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
...+.+.||..++++.+++ | ++++|+|.+. ...++..++..+.....|++.. .+.. ..-++.
T Consensus 95 ~~~~~~~~~~~~~l~~l~~-~---~~~~i~tn~~-~~~~~~~l~~l~~~fd~i~~~~----------~~~~---~KP~~~ 156 (240)
T 3smv_A 95 VKNWPAFPDTVEALQYLKK-H---YKLVILSNID-RNEFKLSNAKLGVEFDHIITAQ----------DVGS---YKPNPN 156 (240)
T ss_dssp GGGCCBCTTHHHHHHHHHH-H---SEEEEEESSC-HHHHHHHHTTTCSCCSEEEEHH----------HHTS---CTTSHH
T ss_pred HhcCCCCCcHHHHHHHHHh-C---CeEEEEeCCC-hhHHHHHHHhcCCccCEEEEcc----------ccCC---CCCCHH
Confidence 3467899999999999998 7 8999999885 7788888776432112222221 0000 001122
Q ss_pred ---HHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCccEEEcCC
Q 008479 463 ---QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 463 ---~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~giv~~~~ 505 (564)
..++. ++..+. .+.++++||||. +|+.|+..||+++++...
T Consensus 157 ~~~~~l~~-~~~lgi-~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~ 201 (240)
T 3smv_A 157 NFTYMIDA-LAKAGI-EKKDILHTAESLYHDHIPANDAGLVSAWIYR 201 (240)
T ss_dssp HHHHHHHH-HHHTTC-CGGGEEEEESCTTTTHHHHHHHTCEEEEECT
T ss_pred HHHHHHHH-HHhcCC-CchhEEEECCCchhhhHHHHHcCCeEEEEcC
Confidence 23333 555565 358999999996 999999999998777533
|
| >3b5o_A CADD-like protein of unknown function; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; HET: MSE; 1.35A {Nostoc punctiforme} PDB: 3b5p_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=2.6e-07 Score=88.80 Aligned_cols=195 Identities=14% Similarity=0.081 Sum_probs=129.1
Q ss_pred HHHHHHHHhHHhHHH--hhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCH-HH---HHHHHHHHH
Q 008479 16 LARRLWIKFKRESVF--AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDD-DA---KLSISELRK 89 (564)
Q Consensus 16 ~~~~lw~~~~~~~~~--~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~-~~---~~~l~~~~~ 89 (564)
++++|=+..+..+.. ..+|||++.+++|+ .+..+.|++|=++| .|.++-+++++++. .+ -....++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~hP~l~~~~~a~--~~ql~~f~~Q~s~F----~ryL~~l~~~~~~~l~~~~~~~~~~eL~~ 80 (244)
T 3b5o_A 7 LTKQLNQLLAQDYVAFSITENPVVQMLSQAS--FAQIAYVMQQYSIF----PKELVGFTELARRKALGAGWNGVAQELQE 80 (244)
T ss_dssp HHHHHHHHHHHHCGGGCTTTCTTGGGTTTCC--HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhchhhhhhccCHHHHHHHhcc--HHHHHHHHHHHHHH----HHHHHHHHhhcccccccccchHHHHHHHH
Confidence 444544443333332 36899999999876 44489999999976 55555555555442 11 122344566
Q ss_pred HHHHHH----------HHHHHHHH-HhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHH
Q 008479 90 GVLEEL----------KMHDSFVK-EWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLG 158 (564)
Q Consensus 90 ~i~~E~----------~~h~~~~~-~~gi~~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 158 (564)
++.+|+ .+++++++ .+|++.+. ..|.|+|++|++=|.+..+.+ ++.+++
T Consensus 81 NL~EE~G~~d~~~~H~~lyRr~L~~~lGld~~~-~~p~~sT~~~idt~~~lcs~d-------------------~~~aLG 140 (244)
T 3b5o_A 81 NIDEEMGSTTGGISHYTLLADGLEEGLGVAVKN-TMPSVATSKLLRTVLSLFDRQ-------------------VDYVLG 140 (244)
T ss_dssp HHHHHTTTTTTTCCHHHHHHHHHHHHHCCCCTT-CCCCHHHHHHHHHHHHHHTSC-------------------HHHHHH
T ss_pred HHHHHhCCCCCCCchHHHHHHHHHHhcCCCccc-cCCCchHHHHHHHHHHHhCCC-------------------HHHHHH
Confidence 777886 59999999 99999975 588999999999999988322 357778
Q ss_pred HHHHHHH-------HHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 008479 159 AMSPCMR-------LYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQ 231 (564)
Q Consensus 159 Al~pC~~-------~Y~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~ 231 (564)
|++.-++ +|..+.+.+.+.. .+ .--..+.+.+..+.=.+..+.+.++++.+. +.+++.++.+-+++
T Consensus 141 A~yatE~iaipe~~ly~~li~gL~~~~---~~-~~~l~FF~~HidelE~~Ha~~l~~~l~~~~---~~eef~~~~~G~~~ 213 (244)
T 3b5o_A 141 ATYAIEATSIPELTLIVKLVEWLHEGA---IP-KDLQYFFSKHLDEWEIEHEAGLRTSVAAYI---QPEEFGEFAAGFRA 213 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSSC---CC-HHHHHHHHHHHC-------CHHHHHHHTTC---CGGGHHHHHHHHHH
T ss_pred HHHHHhhhhhhHHHHHHHHHHHHHhCC---Cc-hhHHHHHHHHhhhhHHHHHHHHHHHHHHHH---hhHhHHHHHHHHHH
Confidence 8755442 5777777664321 11 112245555543333567788899998775 34668999999999
Q ss_pred HHHHHHHhhccC
Q 008479 232 AMKLEVEFFCAQ 243 (564)
Q Consensus 232 ~~~lE~~Fw~~a 243 (564)
++.....||+.-
T Consensus 214 ~Lda~~~fWdgL 225 (244)
T 3b5o_A 214 MIDAMQVWWQEL 225 (244)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999975
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.69 E-value=7.6e-08 Score=93.91 Aligned_cols=95 Identities=13% Similarity=0.113 Sum_probs=73.0
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCch
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
....+.||+.++++.++ +| +++.|+|.+. ...++..++..|+.. ..|++ .+..+
T Consensus 109 ~~~~~~~~~~~~l~~l~-~~---~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~i~~-------------------~~kp~ 164 (251)
T 2pke_A 109 HPVEVIAGVREAVAAIA-AD---YAVVLITKGD-LFHQEQKIEQSGLSDLFPRIEV-------------------VSEKD 164 (251)
T ss_dssp CCCCBCTTHHHHHHHHH-TT---SEEEEEEESC-HHHHHHHHHHHSGGGTCCCEEE-------------------ESCCS
T ss_pred ccCCcCccHHHHHHHHH-CC---CEEEEEeCCC-HHHHHHHHHHcCcHHhCceeee-------------------eCCCC
Confidence 35788999999999999 88 9999999986 788888888776521 11211 11124
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCccEEEc
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIG 503 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~giv~~ 503 (564)
...++.+++..+.+ +.++++||||. ||+.|+..|+++++.-
T Consensus 165 ~~~~~~~~~~l~~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~v 206 (251)
T 2pke_A 165 PQTYARVLSEFDLP-AERFVMIGNSLRSDVEPVLAIGGWGIYT 206 (251)
T ss_dssp HHHHHHHHHHHTCC-GGGEEEEESCCCCCCHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHhCcC-chhEEEECCCchhhHHHHHHCCCEEEEE
Confidence 66777777777763 58999999999 9999999999976664
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.68 E-value=6.6e-07 Score=85.37 Aligned_cols=95 Identities=15% Similarity=0.160 Sum_probs=66.8
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCch
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
..+.+.||+.++++.++++ ++++|+|.+. .. +...|+.. ..+++ +. ....+-.|
T Consensus 102 ~~~~~~~~~~~~l~~l~~~----~~~~i~t~~~-~~-----l~~~~l~~~f~~~~~-----------~~---~~~~~kp~ 157 (230)
T 3vay_A 102 HQVQIFPEVQPTLEILAKT----FTLGVITNGN-AD-----VRRLGLADYFAFALC-----------AE---DLGIGKPD 157 (230)
T ss_dssp TCCCBCTTHHHHHHHHHTT----SEEEEEESSC-CC-----GGGSTTGGGCSEEEE-----------HH---HHTCCTTS
T ss_pred ccCccCcCHHHHHHHHHhC----CeEEEEECCc-hh-----hhhcCcHHHeeeeEE-----------cc---ccCCCCcC
Confidence 3678999999999999864 6899999875 22 45555421 11111 11 11123345
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCccEEEc
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIG 503 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~giv~~ 503 (564)
...++.+++..+.+ +.++++|||+. +|+.|+..||++++.-
T Consensus 158 ~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v 199 (230)
T 3vay_A 158 PAPFLEALRRAKVD-ASAAVHVGDHPSDDIAGAQQAGMRAIWY 199 (230)
T ss_dssp HHHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCC-chheEEEeCChHHHHHHHHHCCCEEEEE
Confidence 78888888888763 58999999997 9999999999976653
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.67 E-value=1.6e-08 Score=100.71 Aligned_cols=102 Identities=14% Similarity=0.061 Sum_probs=74.9
Q ss_pred hcCCCCccHHHHHHHHHHc-CCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchH
Q 008479 384 ERLSLQDGCTTFFQKVVKN-ENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~-g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
....+.||+.++++.++++ | +++.|+|.+. ...++..++..++... + .+.++. ....+..|.
T Consensus 111 ~~~~~~~g~~~~L~~l~~~~g---~~l~i~T~~~-~~~~~~~l~~~~l~~f---------~-~i~~~~---~~~~~kp~~ 173 (275)
T 2qlt_A 111 EHSIEVPGAVKLCNALNALPK---EKWAVATSGT-RDMAKKWFDILKIKRP---------E-YFITAN---DVKQGKPHP 173 (275)
T ss_dssp TTCEECTTHHHHHHHHHTSCG---GGEEEECSSC-HHHHHHHHHHHTCCCC---------S-SEECGG---GCSSCTTSS
T ss_pred cCCCcCcCHHHHHHHHHhccC---CeEEEEeCCC-HHHHHHHHHHcCCCcc---------C-EEEEcc---cCCCCCCCh
Confidence 4567889999999999988 7 9999999986 8889999988775311 1 111111 111223456
Q ss_pred HHHHHHHHHhCCC------CCccEEEEcCCccchhhhhhcCccEEE
Q 008479 463 QAFNNTLEKYGTD------RKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 463 ~~l~~l~~~~~~~------~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
..++.+++..+.. .+.++++||||.||+.|+..||++++.
T Consensus 174 ~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~ 219 (275)
T 2qlt_A 174 EPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVG 219 (275)
T ss_dssp HHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEE
Confidence 7777777777651 247899999999999999999997665
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.67 E-value=1.5e-07 Score=88.52 Aligned_cols=102 Identities=13% Similarity=0.144 Sum_probs=73.1
Q ss_pred HHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccC
Q 008479 378 DIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKV 455 (564)
Q Consensus 378 ~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~ 455 (564)
.+.+......+.||+.+ ++.++++ ++++|+|.+. ...++.+++..|+.. ..+++.+ - .
T Consensus 65 ~~~~~~~~~~~~~~~~~-l~~l~~~----~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~-----------~---~ 124 (201)
T 2w43_A 65 EELNKWKNLKAYEDTKY-LKEISEI----AEVYALSNGS-INEVKQHLERNGLLRYFKGIFSAE-----------S---V 124 (201)
T ss_dssp HHHHHHHTCEECGGGGG-HHHHHHH----SEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEGG-----------G---G
T ss_pred HHHHhhcccccCCChHH-HHHHHhC----CeEEEEeCcC-HHHHHHHHHHCCcHHhCcEEEehh-----------h---c
Confidence 33344446789999999 9999864 6899999986 888999999887531 1222221 0 1
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEE
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
..+-.|...++.+++..+ +.++++||||.+|+.|+..|++++++
T Consensus 125 ~~~Kp~~~~~~~~~~~~~---~~~~~~vGD~~~Di~~a~~aG~~~~~ 168 (201)
T 2w43_A 125 KEYKPSPKVYKYFLDSIG---AKEAFLVSSNAFDVIGAKNAGMRSIF 168 (201)
T ss_dssp TCCTTCHHHHHHHHHHHT---CSCCEEEESCHHHHHHHHHTTCEEEE
T ss_pred CCCCCCHHHHHHHHHhcC---CCcEEEEeCCHHHhHHHHHCCCEEEE
Confidence 111224677777777766 47899999999999999999997555
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.65 E-value=1e-07 Score=90.83 Aligned_cols=103 Identities=16% Similarity=0.210 Sum_probs=72.8
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCC--Cch
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESP--IDK 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g--~~K 461 (564)
..+.+.||+.++++.++ .+++|+|.+- ...++..++..++... |++.+.++.. ...+ ..|
T Consensus 84 ~~~~~~~~~~~~l~~l~------~~~~i~s~~~-~~~~~~~l~~~~l~~~--------~~~~~~~~~~---~~~~~~kpk 145 (229)
T 2fdr_A 84 RDVKIIDGVKFALSRLT------TPRCICSNSS-SHRLDMMLTKVGLKPY--------FAPHIYSAKD---LGADRVKPK 145 (229)
T ss_dssp HHCCBCTTHHHHHHHCC------SCEEEEESSC-HHHHHHHHHHTTCGGG--------TTTCEEEHHH---HCTTCCTTS
T ss_pred cCCccCcCHHHHHHHhC------CCEEEEECCC-hhHHHHHHHhCChHHh--------ccceEEeccc---cccCCCCcC
Confidence 35778899999988764 3799999985 8889999988775310 1011111111 1122 347
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc-EEEcCC
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGSS 505 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~~~~ 505 (564)
...++.+++..+.+ +.++++||||.||+.|+..||++ +.+...
T Consensus 146 ~~~~~~~~~~l~~~-~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~ 189 (229)
T 2fdr_A 146 PDIFLHGAAQFGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFTGA 189 (229)
T ss_dssp SHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHHHHcCCC-hhHeEEEcCCHHHHHHHHHCCCEEEEEecC
Confidence 78888888887764 58999999999999999999997 556543
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=98.58 E-value=4.1e-06 Score=82.70 Aligned_cols=102 Identities=18% Similarity=0.270 Sum_probs=72.4
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
..+.+.||+.++++.+++ + +++.|+|.+. ...++..++..|+... | +.+.++. ....+--+..
T Consensus 118 ~~~~~~~g~~~~L~~L~~-~---~~l~i~Tn~~-~~~~~~~l~~~gl~~~--------f-~~i~~~~---~~~~~KP~p~ 180 (260)
T 2gfh_A 118 QHMILADDVKAMLTELRK-E---VRLLLLTNGD-RQTQREKIEACACQSY--------F-DAIVIGG---EQKEEKPAPS 180 (260)
T ss_dssp HTCCCCHHHHHHHHHHHT-T---SEEEEEECSC-HHHHHHHHHHHTCGGG--------C-SEEEEGG---GSSSCTTCHH
T ss_pred hcCCCCcCHHHHHHHHHc-C---CcEEEEECcC-hHHHHHHHHhcCHHhh--------h-heEEecC---CCCCCCCCHH
Confidence 357899999999999986 5 8999999986 8889999988876321 0 1111111 0111222456
Q ss_pred HHHHHHHHhCCCCCccEEEEcCC-ccchhhhhhcCc-c-EEEc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-G-IVIG 503 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~-g-iv~~ 503 (564)
.+...++..+.+ +.++++|||| .+|+.++..||+ . |.+.
T Consensus 181 ~~~~~~~~~~~~-~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~ 222 (260)
T 2gfh_A 181 IFYHCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWIN 222 (260)
T ss_dssp HHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCC-hhhEEEECCCchhhHHHHHHCCCceEEEEc
Confidence 777777777663 5899999996 999999999998 3 4453
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.58 E-value=5.3e-07 Score=89.59 Aligned_cols=74 Identities=23% Similarity=0.416 Sum_probs=56.1
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHHhhCCceeecC---chhHHhHH
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLY---PGLVKKQK 531 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~~~gi~~~p~~---~~~~~~~~ 531 (564)
..+.+|...++.+++..+.+ ...+++||||.||++|+..|++||+++ +.+.+++.| .++--+ .|+...++
T Consensus 193 ~~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A-----~~v~~~~~e~Gv~~~i~ 266 (279)
T 4dw8_A 193 PQGIDKALSLSVLLENIGMT-REEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAA-----DYITLTNDEDGVAEAIE 266 (279)
T ss_dssp CTTCCHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHC-----SEECCCGGGTHHHHHHH
T ss_pred cCCCChHHHHHHHHHHcCCC-HHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhC-----CEEcCCCCCcHHHHHHH
Confidence 45678999999999988874 578999999999999999999999998 445666554 343322 36666666
Q ss_pred hhhc
Q 008479 532 EYTE 535 (564)
Q Consensus 532 ~~~~ 535 (564)
.+..
T Consensus 267 ~~~~ 270 (279)
T 4dw8_A 267 RIFN 270 (279)
T ss_dssp HHC-
T ss_pred HHHh
Confidence 6543
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=7.1e-09 Score=103.29 Aligned_cols=93 Identities=22% Similarity=0.283 Sum_probs=72.5
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...++||..++++.++++| ++++|+|++. ...++.++++.|+. +++++- .+..|...
T Consensus 134 ~~~~~~g~~~~l~~L~~~g---~~~~i~T~~~-~~~~~~~~~~~gl~--~~f~~~-----------------~p~~k~~~ 190 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEG---LKIIILSGDK-EDKVKELSKELNIQ--EYYSNL-----------------SPEDKVRI 190 (263)
Confidence 4579999999999999988 9999999985 78888888887752 222111 13357777
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
++++... +.++++||||.||++++..||+|+.++..
T Consensus 191 ~~~l~~~-----~~~~~~VGD~~~D~~aa~~Agv~va~g~~ 226 (263)
T 2yj3_A 191 IEKLKQN-----GNKVLMIGDGVNDAAALALADVSVAMGNG 226 (263)
Confidence 7766542 36799999999999999999999988743
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.49 E-value=4.4e-07 Score=90.16 Aligned_cols=75 Identities=15% Similarity=0.294 Sum_probs=49.8
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHHhhCCcee---ecCchhHHhHH
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFI---PLYPGLVKKQK 531 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~~~gi~~~---p~~~~~~~~~~ 531 (564)
..+.+|...++.+++..+.+ ...+++||||.||++|+..|++||+++ +.+.+++.|. ++ .-..|+...++
T Consensus 193 ~~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~-----~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 193 NRRASKGGTLSELVDQLGLT-ADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQ-----AVTLTNAENGVAAAIR 266 (279)
T ss_dssp ESSCCHHHHHHHHHHHTTCC-GGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCS-----CBC------CHHHHHC
T ss_pred cCCCChHHHHHHHHHHcCCC-HHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcc-----eeccCCCccHHHHHHH
Confidence 34678999999999988874 578999999999999999999999997 4566776652 33 22246666666
Q ss_pred hhhcC
Q 008479 532 EYTEG 536 (564)
Q Consensus 532 ~~~~~ 536 (564)
.+..+
T Consensus 267 ~~~~~ 271 (279)
T 3mpo_A 267 KYALN 271 (279)
T ss_dssp -----
T ss_pred HHhcc
Confidence 65544
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.46 E-value=7e-07 Score=85.41 Aligned_cols=93 Identities=17% Similarity=0.185 Sum_probs=63.9
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeeceeecCccccccccccCCCCCch-
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDK- 461 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K- 461 (564)
.+.+.||+.++++.++++| ++++|+|.+. . .++.+++..|+... .+++.+ . .+..|
T Consensus 93 ~~~~~~~~~~~l~~l~~~g---~~~~i~Tn~~-~-~~~~~l~~~gl~~~f~~~~~~~----------~------~~~~Kp 151 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNG---YKLALVSNAS-P-RVKTLLEKFDLKKYFDALALSY----------E------IKAVKP 151 (220)
T ss_dssp EEEECTTHHHHHHHHHTTT---CEEEECCSCH-H-HHHHHHHHHTCGGGCSEEC--------------------------
T ss_pred CceECcCHHHHHHHHHHCC---CEEEEEeCCc-H-HHHHHHHhcCcHhHeeEEEecc----------c------cCCCCC
Confidence 4678999999999999988 9999999874 5 47888888776321 121111 0 01122
Q ss_pred -HHHHHHHHHHhCCCCCccEEEEcCCcc-chhhhhhcCccEEE
Q 008479 462 -VQAFNNTLEKYGTDRKNLSVYIGDSVG-DLLCLLEADIGIVI 502 (564)
Q Consensus 462 -~~~l~~l~~~~~~~~~~~viyiGDs~~-Dl~~l~~Ad~giv~ 502 (564)
...++..++..+.. . ++||||.+ |+.++..||+..+.
T Consensus 152 ~~~~~~~~~~~~~~~---~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 152 NPKIFGFALAKVGYP---A-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp -CCHHHHHHHHHCSS---E-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred CHHHHHHHHHHcCCC---e-EEEcCCchHhHHHHHHCCCeEEE
Confidence 23556666666542 2 99999999 99999999986544
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.46 E-value=5e-07 Score=90.46 Aligned_cols=55 Identities=15% Similarity=0.266 Sum_probs=47.0
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
.+.+|...|+.+++..+.+ ...+++||||.||++|+..|++||+++ +.+.+++.|
T Consensus 208 ~~~~K~~~l~~l~~~lgi~-~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A 263 (283)
T 3dao_A 208 KGVSKWTALSYLIDRFDLL-PDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAA 263 (283)
T ss_dssp TTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHS
T ss_pred CCCcHHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhc
Confidence 4668999999999988874 578999999999999999999999998 446666555
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.45 E-value=5.5e-07 Score=83.88 Aligned_cols=90 Identities=19% Similarity=0.204 Sum_probs=73.0
Q ss_pred HHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCC
Q 008479 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 474 (564)
Q Consensus 395 fl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~ 474 (564)
+++.++++| +++.|+|++. ...++.+++..|+. ++++ ...|...++.+++..+.
T Consensus 47 ~l~~L~~~g---~~~~i~T~~~-~~~~~~~~~~lgi~---~~~~-------------------~~~k~~~l~~~~~~~~~ 100 (176)
T 3mmz_A 47 GIAALRKSG---LTMLILSTEQ-NPVVAARARKLKIP---VLHG-------------------IDRKDLALKQWCEEQGI 100 (176)
T ss_dssp HHHHHHHTT---CEEEEEESSC-CHHHHHHHHHHTCC---EEES-------------------CSCHHHHHHHHHHHHTC
T ss_pred HHHHHHHCC---CeEEEEECcC-hHHHHHHHHHcCCe---eEeC-------------------CCChHHHHHHHHHHcCC
Confidence 889999999 9999999986 78899999998863 3322 14689999999988776
Q ss_pred CCCccEEEEcCCccchhhhhhcCccEEEcC-ChhHHHH
Q 008479 475 DRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRV 511 (564)
Q Consensus 475 ~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~-~~~L~~~ 511 (564)
+ +.+++|||||.||++|+..|+++++++. .+.+++.
T Consensus 101 ~-~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ 137 (176)
T 3mmz_A 101 A-PERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGA 137 (176)
T ss_dssp C-GGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHH
T ss_pred C-HHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHh
Confidence 3 5789999999999999999999999964 3444433
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=98.44 E-value=5.4e-07 Score=86.97 Aligned_cols=92 Identities=12% Similarity=-0.002 Sum_probs=64.5
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchH
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
.....+.||+.++++.++++| ++.|+|.+. ...++.+++..|+.. . |+. .. ..+..|.
T Consensus 92 ~~~~~~~~g~~~~l~~l~~~g----~~~i~Tn~~-~~~~~~~l~~~gl~~--~------f~~-~~--------~~~~~K~ 149 (231)
T 2p11_A 92 PFASRVYPGALNALRHLGARG----PTVILSDGD-VVFQPRKIARSGLWD--E------VEG-RV--------LIYIHKE 149 (231)
T ss_dssp CGGGGBCTTHHHHHHHHHTTS----CEEEEEECC-SSHHHHHHHHTTHHH--H------TTT-CE--------EEESSGG
T ss_pred HHhCCcCccHHHHHHHHHhCC----CEEEEeCCC-HHHHHHHHHHcCcHH--h------cCe-eE--------EecCChH
Confidence 346789999999999999765 799999986 778999998877521 0 111 00 0122354
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcc---chhhhhhcCcc
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVG---DLLCLLEADIG 499 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~---Dl~~l~~Ad~g 499 (564)
..++.+... . .+.++++||||.+ |+.+...||+.
T Consensus 150 ~~~~~~~~~--~-~~~~~~~vgDs~~d~~di~~A~~aG~~ 186 (231)
T 2p11_A 150 LMLDQVMEC--Y-PARHYVMVDDKLRILAAMKKAWGARLT 186 (231)
T ss_dssp GCHHHHHHH--S-CCSEEEEECSCHHHHHHHHHHHGGGEE
T ss_pred HHHHHHHhc--C-CCceEEEEcCccchhhhhHHHHHcCCe
Confidence 455555542 2 3578999999999 88888888874
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.42 E-value=3.8e-07 Score=86.67 Aligned_cols=92 Identities=14% Similarity=0.257 Sum_probs=73.0
Q ss_pred HHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCC
Q 008479 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 474 (564)
Q Consensus 395 fl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~ 474 (564)
-++.++++| +++.|+|++. ...++.++++.|+. .++.+ ...|...++.+++..+.
T Consensus 60 ~l~~L~~~G---~~~~ivT~~~-~~~~~~~l~~lgi~--~~~~~-------------------~k~k~~~~~~~~~~~~~ 114 (195)
T 3n07_A 60 GVKALMNAG---IEIAIITGRR-SQIVENRMKALGIS--LIYQG-------------------QDDKVQAYYDICQKLAI 114 (195)
T ss_dssp HHHHHHHTT---CEEEEECSSC-CHHHHHHHHHTTCC--EEECS-------------------CSSHHHHHHHHHHHHCC
T ss_pred HHHHHHHCC---CEEEEEECcC-HHHHHHHHHHcCCc--EEeeC-------------------CCCcHHHHHHHHHHhCC
Confidence 488899999 9999999996 78899999998863 22211 13688999999988876
Q ss_pred CCCccEEEEcCCccchhhhhhcCccEEEcCC-hhHHHHH
Q 008479 475 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG 512 (564)
Q Consensus 475 ~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~-~~L~~~~ 512 (564)
+ +.+++|||||.||++|+..|++++++++. +.+++.+
T Consensus 115 ~-~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~a 152 (195)
T 3n07_A 115 A-PEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRA 152 (195)
T ss_dssp C-GGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHC
T ss_pred C-HHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhC
Confidence 3 57899999999999999999999999743 4444433
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.41 E-value=2.5e-06 Score=85.19 Aligned_cols=72 Identities=21% Similarity=0.338 Sum_probs=54.7
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHHhhCCceeecC---chhHHhHH
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLY---PGLVKKQK 531 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~~~gi~~~p~~---~~~~~~~~ 531 (564)
..+.+|...++.+++..+.+ ...+++||||.||++|+..|++||+++ +.+.+++.| .++--+ .|+...++
T Consensus 198 ~~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A-----d~v~~s~~edGv~~~i~ 271 (290)
T 3dnp_A 198 PKGVSKEAGLALVASELGLS-MDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKA-----DWVTRSNDEQGVAYMMK 271 (290)
T ss_dssp ETTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHS-----SEECCCTTTTHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHcCCC-HHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhc-----CEECCCCCccHHHHHHH
Confidence 34668999999999988874 578999999999999999999999998 446666655 344322 35665554
Q ss_pred hh
Q 008479 532 EY 533 (564)
Q Consensus 532 ~~ 533 (564)
.+
T Consensus 272 ~~ 273 (290)
T 3dnp_A 272 EY 273 (290)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=2.9e-06 Score=91.22 Aligned_cols=108 Identities=11% Similarity=0.054 Sum_probs=71.0
Q ss_pred HHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEcccc-----CHHHHHHHHhhcCCCceeEEeeceeecCcccccccccc
Q 008479 380 KKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCW-----CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEK 454 (564)
Q Consensus 380 ~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~-----s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~ 454 (564)
.+......+.||+.++++.++++| +++.|+|.++ ....+...+....--...|++.+- .|
T Consensus 93 ~~~~~~~~~~~~~~~~L~~L~~~g---~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~-------~~----- 157 (555)
T 3i28_A 93 DKAISARKINRPMLQAALMLRKKG---FTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQ-------VG----- 157 (555)
T ss_dssp HHHHHHCEECHHHHHHHHHHHHTT---CEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHH-------HT-----
T ss_pred HHhHhhcCcChhHHHHHHHHHHCC---CEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccc-------cC-----
Confidence 334456889999999999999999 9999999971 144444433221100122332210 01
Q ss_pred CCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 455 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 455 ~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
.+--+...+...++..+.+ +.++++||||.+|+.++..|++..+....
T Consensus 158 --~~KP~p~~~~~~~~~lg~~-p~~~~~v~D~~~di~~a~~aG~~~~~~~~ 205 (555)
T 3i28_A 158 --MVKPEPQIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILVQD 205 (555)
T ss_dssp --CCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEECSS
T ss_pred --CCCCCHHHHHHHHHHcCCC-hhHEEEECCcHHHHHHHHHcCCEEEEECC
Confidence 1112346777777777763 58999999999999999999996555433
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.38 E-value=4.5e-06 Score=81.71 Aligned_cols=104 Identities=12% Similarity=0.148 Sum_probs=68.2
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||+.++++.++++| +++.+.|.+- ....+|+..|+... + +.+.++.- ...+--+...
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g---~~i~i~~~~~---~~~~~L~~~gl~~~------F---d~i~~~~~---~~~~KP~p~~ 175 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNN---IKIGLSSASK---NAINVLNHLGISDK------F---DFIADAGK---CKNNKPHPEI 175 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTT---CEEEECCSCT---THHHHHHHHTCGGG------C---SEECCGGG---CCSCTTSSHH
T ss_pred ccccchhHHHHHHHHHhcc---cccccccccc---hhhhHhhhcccccc------c---ceeecccc---cCCCCCcHHH
Confidence 4578999999999999998 8887766542 35567887776321 1 11111110 0011112356
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEcCChh
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSS 507 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~~~~~ 507 (564)
+...++..+. .+.+++|||||.+|+.++..||+ .|.+++...
T Consensus 176 ~~~a~~~lg~-~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 218 (250)
T 4gib_A 176 FLMSAKGLNV-NPQNCIGIEDASAGIDAINSANMFSVGVGNYEN 218 (250)
T ss_dssp HHHHHHHHTC-CGGGEEEEESSHHHHHHHHHTTCEEEEESCTTT
T ss_pred HHHHHHHhCC-ChHHeEEECCCHHHHHHHHHcCCEEEEECChhH
Confidence 6666766666 35899999999999999999998 566654433
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=98.36 E-value=9.4e-06 Score=80.33 Aligned_cols=98 Identities=13% Similarity=0.130 Sum_probs=70.8
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcC---CCceeEEeeceeecCccccccccccCCCCCch
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAG---LNALNVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g---~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
.+.+.||..++++.++++| ++++|+|.+- ...++.+++..+ +... | +.++++ ..+ .|
T Consensus 128 ~~~~~~g~~~~L~~L~~~g---~~~~i~Tn~~-~~~~~~~l~~~~~~~l~~~--------f-d~i~~~------~~~-~K 187 (261)
T 1yns_A 128 KAEFFADVVPAVRKWREAG---MKVYIYSSGS-VEAQKLLFGHSTEGDILEL--------V-DGHFDT------KIG-HK 187 (261)
T ss_dssp CBCCCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHTBTTBCCGGG--------C-SEEECG------GGC-CT
T ss_pred ccccCcCHHHHHHHHHhCC---CeEEEEeCCC-HHHHHHHHHhhcccChHhh--------c-cEEEec------CCC-CC
Confidence 5789999999999999998 9999999985 777888887543 3110 1 111111 012 34
Q ss_pred --HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEc
Q 008479 462 --VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 503 (564)
Q Consensus 462 --~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~ 503 (564)
...++..++..+.. +.++++||||.+|+.+...||+ .|.+.
T Consensus 188 P~p~~~~~~~~~lg~~-p~~~l~VgDs~~di~aA~~aG~~~i~v~ 231 (261)
T 1yns_A 188 VESESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVV 231 (261)
T ss_dssp TCHHHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred CCHHHHHHHHHHhCcC-cccEEEEcCCHHHHHHHHHCCCEEEEEe
Confidence 36677777777663 5899999999999999999998 44553
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.36 E-value=4.5e-06 Score=80.89 Aligned_cols=101 Identities=13% Similarity=0.137 Sum_probs=67.5
Q ss_pred ccHHHHHHHHH-Hc-CCCCCcE-----------EEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCC
Q 008479 390 DGCTTFFQKVV-KN-ENLNANV-----------HVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVE 456 (564)
Q Consensus 390 ~G~~efl~~l~-~~-g~~~~~~-----------~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~ 456 (564)
+.+.++++.++ +. | +.+ .+++.+...+.++.+++..+ ....++++.. ..++ ..
T Consensus 84 ~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~ei---~~ 149 (231)
T 1wr8_A 84 DEEWILWNEIRKRFPN---ARTSYTMPDRRAGLVIMRETINVETVREIINELN-LNLVAVDSGF-------AIHV---KK 149 (231)
T ss_dssp SHHHHHHHHHHHHCTT---CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTT-CSCEEEECSS-------CEEE---EC
T ss_pred HHHHHHHHHHHHhCCC---ceEEecCCCceeeEEEECCCCCHHHHHHHHHhcC-CcEEEEecCc-------EEEE---ec
Confidence 67777887777 54 4 332 45552334677888877654 2233332210 1111 22
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
.+..|...++.+++..+.+ ..++++||||.||++|+..|+++++++..
T Consensus 150 ~~~~K~~~~~~~~~~~~~~-~~~~~~iGD~~nD~~~~~~ag~~v~~~~~ 197 (231)
T 1wr8_A 150 PWINKGSGIEKASEFLGIK-PKEVAHVGDGENDLDAFKVVGYKVAVAQA 197 (231)
T ss_dssp TTCCHHHHHHHHHHHHTSC-GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred CCCChHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCeEEecCC
Confidence 4567999999999887763 47899999999999999999999888643
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.32 E-value=1.5e-06 Score=81.88 Aligned_cols=85 Identities=14% Similarity=0.278 Sum_probs=70.2
Q ss_pred HHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCC
Q 008479 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 474 (564)
Q Consensus 395 fl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~ 474 (564)
+++.++++| +++.|+|++. ...++.++++.|+. .++.+ ...|...++.+.+..+.
T Consensus 54 ~l~~L~~~g---~~~~i~T~~~-~~~~~~~~~~lgl~--~~f~~-------------------~~~K~~~~~~~~~~~g~ 108 (189)
T 3mn1_A 54 GIKMLIASG---VTTAIISGRK-TAIVERRAKSLGIE--HLFQG-------------------REDKLVVLDKLLAELQL 108 (189)
T ss_dssp HHHHHHHTT---CEEEEECSSC-CHHHHHHHHHHTCS--EEECS-------------------CSCHHHHHHHHHHHHTC
T ss_pred HHHHHHHCC---CEEEEEECcC-hHHHHHHHHHcCCH--HHhcC-------------------cCChHHHHHHHHHHcCC
Confidence 888999999 9999999996 78899999988862 22221 04688999999988776
Q ss_pred CCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 475 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 475 ~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
+ +.++++||||.||+.|+..|+++++++..
T Consensus 109 ~-~~~~~~vGD~~nDi~~~~~ag~~~~~~~~ 138 (189)
T 3mn1_A 109 G-YEQVAYLGDDLPDLPVIRRVGLGMAVANA 138 (189)
T ss_dssp C-GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred C-hhHEEEECCCHHHHHHHHHCCCeEEeCCc
Confidence 3 57899999999999999999999999743
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.32 E-value=3.4e-06 Score=81.81 Aligned_cols=118 Identities=17% Similarity=0.092 Sum_probs=82.3
Q ss_pred CCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceee-c-Cc-cc--c--------------
Q 008479 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSF-K-ES-IS--T-------------- 448 (564)
Q Consensus 388 lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~-~-~g-~~--t-------------- 448 (564)
+.|...+.++.++++| ++++|+|+.- ...++.+++..+++..-|-+|-..+ + +| .. .
T Consensus 23 i~~~~~~~l~~l~~~g---~~~~i~TGr~-~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~ 98 (227)
T 1l6r_A 23 ISTKAIESIRSAEKKG---LTVSLLSGNV-IPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSK 98 (227)
T ss_dssp BCHHHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHCC---CEEEEECCCC-cHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHH
Confidence 4556778899999988 9999999874 7778888888776432344443322 1 22 11 0
Q ss_pred ------------------------------------------cc-ccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcC
Q 008479 449 ------------------------------------------GE-IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGD 485 (564)
Q Consensus 449 ------------------------------------------G~-~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGD 485 (564)
|. +..-...+.+|...++.+++..+.+ ...+++|||
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~-~~~~~~iGD 177 (227)
T 1l6r_A 99 RTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLE-YDEILVIGD 177 (227)
T ss_dssp TSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCC-GGGEEEECC
T ss_pred HhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcC-HHHEEEECC
Confidence 00 0000134679999999999887763 478999999
Q ss_pred CccchhhhhhcCccEEEcC-ChhHHH
Q 008479 486 SVGDLLCLLEADIGIVIGS-SSSLRR 510 (564)
Q Consensus 486 s~~Dl~~l~~Ad~giv~~~-~~~L~~ 510 (564)
|.||++|+..|++||+++. .+.+++
T Consensus 178 ~~nD~~m~~~ag~~va~~n~~~~~k~ 203 (227)
T 1l6r_A 178 SNNDMPMFQLPVRKACPANATDNIKA 203 (227)
T ss_dssp SGGGHHHHTSSSEEEECTTSCHHHHH
T ss_pred cHHhHHHHHHcCceEEecCchHHHHH
Confidence 9999999999999999973 344443
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=1.9e-06 Score=80.35 Aligned_cols=86 Identities=17% Similarity=0.250 Sum_probs=70.1
Q ss_pred HHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHh
Q 008479 393 TTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY 472 (564)
Q Consensus 393 ~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~ 472 (564)
.++++.++++| ++++|+|++. ...++.++++.|+. .++ ++ +..|...++.+++..
T Consensus 41 ~~~l~~L~~~G---~~~~i~Tg~~-~~~~~~~~~~lgl~--~~~------~~-------------~k~k~~~~~~~~~~~ 95 (180)
T 1k1e_A 41 GLGIKMLMDAD---IQVAVLSGRD-SPILRRRIADLGIK--LFF------LG-------------KLEKETACFDLMKQA 95 (180)
T ss_dssp HHHHHHHHHTT---CEEEEEESCC-CHHHHHHHHHHTCC--EEE------ES-------------CSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCC---CeEEEEeCCC-cHHHHHHHHHcCCc--eee------cC-------------CCCcHHHHHHHHHHc
Confidence 47899999998 9999999986 68899999988863 222 11 246888999888877
Q ss_pred CCCCCccEEEEcCCccchhhhhhcCccEEEcC
Q 008479 473 GTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 504 (564)
Q Consensus 473 ~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~ 504 (564)
+.+ +.++++||||.||++|+..|+++++++.
T Consensus 96 ~~~-~~~~~~vGD~~~Di~~~~~ag~~~~~~~ 126 (180)
T 1k1e_A 96 GVT-AEQTAYIGDDSVDLPAFAACGTSFAVAD 126 (180)
T ss_dssp TCC-GGGEEEEECSGGGHHHHHHSSEEEECTT
T ss_pred CCC-HHHEEEECCCHHHHHHHHHcCCeEEeCC
Confidence 763 4789999999999999999999998863
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.27 E-value=2.6e-06 Score=77.49 Aligned_cols=89 Identities=15% Similarity=0.161 Sum_probs=70.1
Q ss_pred CccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHH
Q 008479 389 QDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNT 468 (564)
Q Consensus 389 r~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l 468 (564)
.|+..++++.++++| ++++|+|++. ...++.+++..|+. .++ +. +..|...++.+
T Consensus 38 ~~~~~~~l~~l~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~--~~~------~~-------------~kp~~~~~~~~ 92 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMG---ITLAVISGRD-SAPLITRLKELGVE--EIY------TG-------------SYKKLEIYEKI 92 (162)
T ss_dssp EHHHHHHHHHHHTTT---CEEEEEESCC-CHHHHHHHHHTTCC--EEE------EC-------------C--CHHHHHHH
T ss_pred cccHHHHHHHHHHCC---CEEEEEeCCC-cHHHHHHHHHcCCH--hhc------cC-------------CCCCHHHHHHH
Confidence 345578999999988 9999999996 68899999988763 222 11 23477888888
Q ss_pred HHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 469 LEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 469 ~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
++..+.+ +.++++||||.+|+.++..+++++++.
T Consensus 93 ~~~~~~~-~~~~~~vGD~~~Di~~a~~ag~~~~~~ 126 (162)
T 2p9j_A 93 KEKYSLK-DEEIGFIGDDVVDIEVMKKVGFPVAVR 126 (162)
T ss_dssp HHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred HHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEec
Confidence 8777653 578999999999999999999988875
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.2e-05 Score=78.39 Aligned_cols=100 Identities=11% Similarity=0.154 Sum_probs=67.2
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||..++++.++++| +++.|+|.+. ..+.+|+..|+... + +.+.++.- ...+--....
T Consensus 93 ~~~~~pg~~~ll~~L~~~g---~~i~i~t~~~---~~~~~l~~~gl~~~------f---d~i~~~~~---~~~~KP~p~~ 154 (243)
T 4g9b_A 93 VNAVLPGIRSLLADLRAQQ---ISVGLASVSL---NAPTILAALELREF------F---TFCADASQ---LKNSKPDPEI 154 (243)
T ss_dssp GGGBCTTHHHHHHHHHHTT---CEEEECCCCT---THHHHHHHTTCGGG------C---SEECCGGG---CSSCTTSTHH
T ss_pred cccccccHHHHHHhhhccc---ccceeccccc---chhhhhhhhhhccc------c---cccccccc---ccCCCCcHHH
Confidence 3468899999999999998 9999999764 25666777775321 1 11111110 0011112356
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEc
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 503 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~ 503 (564)
+...++..+. .+.++++||||.+|+.+...||+ .|.+.
T Consensus 155 ~~~a~~~lg~-~p~e~l~VgDs~~di~aA~~aG~~~I~V~ 193 (243)
T 4g9b_A 155 FLAACAGLGV-PPQACIGIEDAQAGIDAINASGMRSVGIG 193 (243)
T ss_dssp HHHHHHHHTS-CGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHcCC-ChHHEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 6666666666 35899999999999999999998 45554
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=98.25 E-value=1.2e-05 Score=79.72 Aligned_cols=117 Identities=18% Similarity=0.234 Sum_probs=79.9
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccC---HHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCch
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC---GDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s---~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
..++.||+.++++.++++| ++++|||+.-+ .......|+++|++... -+.+...+ ....|
T Consensus 99 ~~~~~pG~~ell~~L~~~G---~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~--~~~Lilr~------------~~~~K 161 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHN---GKVFYVTNRKDSTEKSGTIDDMKRLGFNGVE--ESAFYLKK------------DKSAK 161 (262)
T ss_dssp CCEECTTHHHHHHHHHHTT---EEEEEEEEEETTTTHHHHHHHHHHHTCSCCS--GGGEEEES------------SCSCC
T ss_pred CCCCCccHHHHHHHHHHCC---CeEEEEeCCCccchHHHHHHHHHHcCcCccc--ccceeccC------------CCCCh
Confidence 5688999999999999999 99999998642 47888899998875310 00111111 12468
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHHHHHhhCCceeecCc
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYP 524 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~~~~~~gi~~~p~~~ 524 (564)
..+++.+... + ...+.||||..+|+.+..... . .-+....+......+|-+|+-|.+
T Consensus 162 ~~~r~~l~~~-G---y~iv~~vGD~~~Dl~~~~~~~-~-~~~r~a~v~~~~~~fG~~~ivlPN 218 (262)
T 3ocu_A 162 AARFAEIEKQ-G---YEIVLYVGDNLDDFGNTVYGK-L-NADRRAFVDQNQGKFGKTFIMLPN 218 (262)
T ss_dssp HHHHHHHHHT-T---EEEEEEEESSGGGGCSTTTTC-C-HHHHHHHHHHTGGGBTTTEEECCC
T ss_pred HHHHHHHHhc-C---CCEEEEECCChHHhccccccC-C-HHHHHHHHHHHHHHhCCCEEEeCC
Confidence 8888887764 1 245779999999999744321 0 011223466677889999997764
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=98.25 E-value=3.3e-06 Score=81.01 Aligned_cols=109 Identities=13% Similarity=0.089 Sum_probs=76.8
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCH---------------HHHHHHHhhcCCCceeEEeeceeecCccccc
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG---------------DLIRASFSSAGLNALNVHANEFSFKESISTG 449 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~---------------~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG 449 (564)
...+.||+.++++.++++| ++++|+|.+. . ..++..+++.|+....++...... +|.+.
T Consensus 54 ~~~~~~g~~e~L~~L~~~G---~~~~i~Tn~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~-~g~~~- 127 (218)
T 2o2x_A 54 EIVLRPQMLPAIATANRAG---IPVVVVTNQS-GIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHE-AGVGP- 127 (218)
T ss_dssp GCCBCGGGHHHHHHHHHHT---CCEEEEEECH-HHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCT-TCCST-
T ss_pred cCeECcCHHHHHHHHHHCC---CEEEEEcCcC-CCCcccccHHHHHHHHHHHHHHHHHcCCceeeEEEeecCC-CCcee-
Confidence 4678999999999999999 9999999985 5 688889998886423333222111 12111
Q ss_pred cccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccE
Q 008479 450 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 500 (564)
Q Consensus 450 ~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 500 (564)
........+-.|...++.+++..+.+ +.++++|||+.+|+.++..+++..
T Consensus 128 ~~~~~~~~~KP~~~~~~~~~~~~~i~-~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 LAIPDHPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp TCCSSCTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSE
T ss_pred ecccCCccCCCCHHHHHHHHHHcCCC-HHHEEEEeCCHHHHHHHHHCCCCE
Confidence 11112223334557788888777763 578999999999999999999854
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.23 E-value=2.6e-06 Score=81.93 Aligned_cols=85 Identities=14% Similarity=0.314 Sum_probs=70.6
Q ss_pred HHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCC
Q 008479 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 474 (564)
Q Consensus 395 fl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~ 474 (564)
+++.++++| +++.|+|++. ...++.+++..|+. .++.+. ..|...++.+++..+.
T Consensus 84 ~L~~L~~~G---~~l~I~T~~~-~~~~~~~l~~lgi~--~~f~~~-------------------k~K~~~l~~~~~~lg~ 138 (211)
T 3ij5_A 84 GIRCLITSD---IDVAIITGRR-AKLLEDRANTLGIT--HLYQGQ-------------------SDKLVAYHELLATLQC 138 (211)
T ss_dssp HHHHHHHTT---CEEEEECSSC-CHHHHHHHHHHTCC--EEECSC-------------------SSHHHHHHHHHHHHTC
T ss_pred HHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCCc--hhhccc-------------------CChHHHHHHHHHHcCc
Confidence 889999999 9999999986 68899999998863 222211 4689999999988876
Q ss_pred CCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 475 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 475 ~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
+ +.++++||||.+|++|+..|+++++++..
T Consensus 139 ~-~~~~~~vGDs~nDi~~~~~ag~~~a~~~~ 168 (211)
T 3ij5_A 139 Q-PEQVAYIGDDLIDWPVMAQVGLSVAVADA 168 (211)
T ss_dssp C-GGGEEEEECSGGGHHHHTTSSEEEECTTS
T ss_pred C-cceEEEEcCCHHHHHHHHHCCCEEEeCCc
Confidence 3 57999999999999999999999999744
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=98.20 E-value=4.5e-06 Score=83.74 Aligned_cols=91 Identities=21% Similarity=0.294 Sum_probs=72.4
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...++||+.++++.++++| +++.|+|++. ...++.+++..|+. .++.+ + .+..|...
T Consensus 161 ~~~~~~g~~~~l~~L~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~--~~f~~------------i-----~~~~K~~~ 217 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMG---IKVGMITGDN-WRSAEAISRELNLD--LVIAE------------V-----LPHQKSEE 217 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCS--EEECS------------C-----CTTCHHHH
T ss_pred ccccchhHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHhCCc--eeeee------------c-----ChHHHHHH
Confidence 4689999999999999999 9999999996 88899999988762 22211 1 12368777
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcC
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 504 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~ 504 (564)
++++.. . .++++||||.+|+.|+..||++++++.
T Consensus 218 ~~~l~~-----~-~~~~~vGDs~~Di~~a~~ag~~v~~~~ 251 (287)
T 3a1c_A 218 VKKLQA-----K-EVVAFVGDGINDAPALAQADLGIAVGS 251 (287)
T ss_dssp HHHHTT-----T-CCEEEEECTTTCHHHHHHSSEEEEECC
T ss_pred HHHHhc-----C-CeEEEEECCHHHHHHHHHCCeeEEeCC
Confidence 776543 2 579999999999999999999988864
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=5e-06 Score=79.49 Aligned_cols=113 Identities=12% Similarity=0.165 Sum_probs=77.6
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccC--------------HHHHHHHHhhcCCCceeEEeeceeecCcccccc
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--------------GDLIRASFSSAGLNALNVHANEFSFKESISTGE 450 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s--------------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~ 450 (564)
...+.||+.++++.++++| ++++|+|.+.. ...++..|+..|+....++...-. .++ .+|.
T Consensus 48 ~~~~~pg~~e~L~~L~~~G---~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~~~~~~~~~-~~~-~~~~ 122 (211)
T 2gmw_A 48 NFEFIDGVIDAMRELKKMG---FALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHH-PQG-SVEE 122 (211)
T ss_dssp GCCBCTTHHHHHHHHHHTT---CEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCB-TTC-SSGG
T ss_pred cCcCCcCHHHHHHHHHHCC---CeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceEEEEECCcC-CCC-cccc
Confidence 4678999999999999999 99999998852 378888999888753333322211 111 1121
Q ss_pred ccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc--EEEc
Q 008479 451 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG--IVIG 503 (564)
Q Consensus 451 ~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g--iv~~ 503 (564)
....+..+--|...++..++..+.+ +.++++|||+.+|+.++..|++. |.+.
T Consensus 123 ~~~~~~~~KP~p~~~~~~~~~lgi~-~~~~~~VGD~~~Di~~a~~aG~~~~i~v~ 176 (211)
T 2gmw_A 123 FRQVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVR 176 (211)
T ss_dssp GBSCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEES
T ss_pred cCccCcCCCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCceEEEEe
Confidence 1111222333456777777777653 57899999999999999999985 4443
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=98.19 E-value=1.5e-05 Score=78.71 Aligned_cols=117 Identities=15% Similarity=0.191 Sum_probs=80.3
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEcccc---CHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCch
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCW---CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~---s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
..++.||+.++++.++++| ++++|||+.- +.......|+++|++... .+.+.+.+ ....|
T Consensus 99 ~~~~~pg~~ell~~L~~~G---~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~--~~~Lilr~------------~~~~K 161 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANG---GTMFFVSNRRDDVEKAGTVDDMKRLGFTGVN--DKTLLLKK------------DKSNK 161 (260)
T ss_dssp CCEECTTHHHHHHHHHHTT---CEEEEEEEEETTTSHHHHHHHHHHHTCCCCS--TTTEEEES------------SCSSS
T ss_pred CCCCCccHHHHHHHHHHCC---CeEEEEeCCCccccHHHHHHHHHHcCcCccc--cceeEecC------------CCCCh
Confidence 4678899999999999999 9999999874 247888999998874310 00111111 12468
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHHHHHhhCCceeecCc
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYP 524 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~~~~~~gi~~~p~~~ 524 (564)
..+++++.+. ....+.||||+.+|+.+.-... . .-+.+..+......+|-+|+-|.+
T Consensus 162 ~~~r~~L~~~----gy~iv~~iGD~~~Dl~~~~~~~-~-~~~r~a~v~~~~~~fG~~~ivlPN 218 (260)
T 3pct_A 162 SVRFKQVEDM----GYDIVLFVGDNLNDFGDATYKK-S-NAERRDFVAKNSKAFGKKFIVLPN 218 (260)
T ss_dssp HHHHHHHHTT----TCEEEEEEESSGGGGCGGGTTC-C-HHHHHHHHHHTGGGBTTTEEECCC
T ss_pred HHHHHHHHhc----CCCEEEEECCChHHcCcccccC-C-HHHHHHHHHHHHHHhCCCEEEeCC
Confidence 8888887752 1355779999999999844321 0 111233566677889999997764
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.18 E-value=4.9e-06 Score=77.81 Aligned_cols=98 Identities=9% Similarity=0.037 Sum_probs=74.6
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
+...+.||+.++++.++++| ++++|+|++.....++.+++..|+... +.+.. ..+..|..
T Consensus 65 ~~~~~~~g~~e~L~~L~~~G---~~v~ivT~~~~~~~~~~~l~~~gl~~~--f~~~~---------------~~~~~k~~ 124 (187)
T 2wm8_A 65 QDVRLYPEVPEVLKRLQSLG---VPGAAASRTSEIEGANQLLELFDLFRY--FVHRE---------------IYPGSKIT 124 (187)
T ss_dssp CEECCCTTHHHHHHHHHHHT---CCEEEEECCSCHHHHHHHHHHTTCTTT--EEEEE---------------ESSSCHHH
T ss_pred cccCcchhHHHHHHHHHHCC---ceEEEEeCCCChHHHHHHHHHcCcHhh--cceeE---------------EEeCchHH
Confidence 35689999999999999999 999999988425789999998876321 11100 01124777
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEE
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
.++.+++..+.+ +.++++|||+.+|+.++..+++.++.
T Consensus 125 ~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~i~ 162 (187)
T 2wm8_A 125 HFERLQQKTGIP-FSQMIFFDDERRNIVDVSKLGVTCIH 162 (187)
T ss_dssp HHHHHHHHHCCC-GGGEEEEESCHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHcCCC-hHHEEEEeCCccChHHHHHcCCEEEE
Confidence 888888877763 57899999999999999999985443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.18 E-value=3.2e-06 Score=78.32 Aligned_cols=91 Identities=18% Similarity=0.211 Sum_probs=68.1
Q ss_pred HHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCC
Q 008479 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 474 (564)
Q Consensus 395 fl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~ 474 (564)
.++.++++| +++.|+|+. ..++.+++++.+... ++ .| +.+|...++.+++..+.
T Consensus 44 ~L~~Lk~~G---i~~~I~Tg~---~~~~~~l~~l~lgi~-~~-----------~g--------~~~K~~~l~~~~~~~gi 97 (168)
T 3ewi_A 44 GISLLKKSG---IEVRLISER---ACSKQTLSALKLDCK-TE-----------VS--------VSDKLATVDEWRKEMGL 97 (168)
T ss_dssp HHHHHHHTT---CEEEEECSS---CCCHHHHHTTCCCCC-EE-----------CS--------CSCHHHHHHHHHHHTTC
T ss_pred HHHHHHHCC---CEEEEEeCc---HHHHHHHHHhCCCcE-EE-----------EC--------CCChHHHHHHHHHHcCc
Confidence 578889889 999999987 578888884322111 21 11 13699999999998876
Q ss_pred CCCccEEEEcCCccchhhhhhcCccEEEcC-ChhHHHHH
Q 008479 475 DRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG 512 (564)
Q Consensus 475 ~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~-~~~L~~~~ 512 (564)
+ +.+++|||||.||++|+..|++++++++ .+.+++.|
T Consensus 98 ~-~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~A 135 (168)
T 3ewi_A 98 C-WKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAV 135 (168)
T ss_dssp C-GGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTC
T ss_pred C-hHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhC
Confidence 3 5789999999999999999999999863 34454444
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=8e-06 Score=74.39 Aligned_cols=85 Identities=19% Similarity=0.191 Sum_probs=69.0
Q ss_pred HHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCC
Q 008479 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 474 (564)
Q Consensus 395 fl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~ 474 (564)
+++.++++| ++++|+|++. ...++.++++.|+. .++.. ...|...++.+++..+.
T Consensus 39 ~l~~l~~~g---~~~~i~T~~~-~~~~~~~~~~~gl~--~~~~~-------------------~kpk~~~~~~~~~~~~~ 93 (164)
T 3e8m_A 39 GIFWAHNKG---IPVGILTGEK-TEIVRRRAEKLKVD--YLFQG-------------------VVDKLSAAEELCNELGI 93 (164)
T ss_dssp HHHHHHHTT---CCEEEECSSC-CHHHHHHHHHTTCS--EEECS-------------------CSCHHHHHHHHHHHHTC
T ss_pred HHHHHHHCC---CEEEEEeCCC-hHHHHHHHHHcCCC--Eeecc-------------------cCChHHHHHHHHHHcCC
Confidence 788899988 9999999885 78899999988763 22221 13588889988888776
Q ss_pred CCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 475 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 475 ~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
+ +.+++|||||.+|+.|+..|+++++++..
T Consensus 94 ~-~~~~~~vGD~~~Di~~~~~ag~~~~~~~~ 123 (164)
T 3e8m_A 94 N-LEQVAYIGDDLNDAKLLKRVGIAGVPASA 123 (164)
T ss_dssp C-GGGEEEECCSGGGHHHHTTSSEEECCTTS
T ss_pred C-HHHEEEECCCHHHHHHHHHCCCeEEcCCh
Confidence 3 57899999999999999999999888644
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.14 E-value=4.1e-06 Score=94.90 Aligned_cols=92 Identities=22% Similarity=0.274 Sum_probs=76.6
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 465 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 465 (564)
-++||+..+.++.++++| ++++++|+.- ....+.+.++.|++ +++++ ....+|.+.+
T Consensus 553 D~i~~~~~~aI~~L~~~G---i~v~mlTGd~-~~~a~~ia~~lgi~--~v~a~-----------------~~P~~K~~~v 609 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSG---IEIVMLTGDS-KRTAEAVAGTLGIK--KVVAE-----------------IMPEDKSRIV 609 (736)
T ss_dssp CCBCSSHHHHHHHHHHHT---CEEEEECSSC-HHHHHHHHHHHTCC--CEECS-----------------CCHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCC--EEEEe-----------------cCHHHHHHHH
Confidence 379999999999999999 9999999985 88899999888863 22221 1334799999
Q ss_pred HHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 466 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 466 ~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
+++.+. +..+.++|||.||.+||..||+||+++..
T Consensus 610 ~~l~~~-----g~~V~~vGDG~ND~paL~~AdvGIAmg~g 644 (736)
T 3rfu_A 610 SELKDK-----GLIVAMAGDGVNDAPALAKADIGIAMGTG 644 (736)
T ss_dssp HHHHHH-----SCCEEEEECSSTTHHHHHHSSEEEEESSS
T ss_pred HHHHhc-----CCEEEEEECChHhHHHHHhCCEEEEeCCc
Confidence 998874 35799999999999999999999999854
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.13 E-value=3.5e-06 Score=79.51 Aligned_cols=90 Identities=14% Similarity=0.333 Sum_probs=70.3
Q ss_pred HHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCC
Q 008479 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 474 (564)
Q Consensus 395 fl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~ 474 (564)
.++.++++| +++.|+|++- ...++.+++..|+. .++.+. ..|...++.+++..+.
T Consensus 54 ~l~~L~~~g---~~~~ivTn~~-~~~~~~~l~~lgl~--~~~~~~-------------------kpk~~~~~~~~~~~~~ 108 (191)
T 3n1u_A 54 GLKLLMAAG---IQVAIITTAQ-NAVVDHRMEQLGIT--HYYKGQ-------------------VDKRSAYQHLKKTLGL 108 (191)
T ss_dssp HHHHHHHTT---CEEEEECSCC-SHHHHHHHHHHTCC--EEECSC-------------------SSCHHHHHHHHHHHTC
T ss_pred HHHHHHHCC---CeEEEEeCcC-hHHHHHHHHHcCCc--cceeCC-------------------CChHHHHHHHHHHhCC
Confidence 588899988 9999999985 78899999988863 221111 3578888888887776
Q ss_pred CCCccEEEEcCCccchhhhhhcCccEEEcCC-hhHHH
Q 008479 475 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRR 510 (564)
Q Consensus 475 ~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~-~~L~~ 510 (564)
+ +.++++||||.||+.|+..|+++++++.. +.+++
T Consensus 109 ~-~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~ 144 (191)
T 3n1u_A 109 N-DDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLE 144 (191)
T ss_dssp C-GGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHH
T ss_pred C-HHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHH
Confidence 3 57899999999999999999999988744 34443
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=4.2e-07 Score=85.51 Aligned_cols=85 Identities=12% Similarity=0.020 Sum_probs=59.7
Q ss_pred hcCCCCccHHHHHHHHHHc-CCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchH
Q 008479 384 ERLSLQDGCTTFFQKVVKN-ENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~-g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
....+.||+.++++.++++ | ++++|+|++. ...++.+++..|+ |+ .+.++
T Consensus 70 ~~~~~~~g~~e~L~~L~~~~g---~~~~ivT~~~-~~~~~~~l~~~gl-----------f~-~i~~~------------- 120 (193)
T 2i7d_A 70 LDLEPIPGALDAVREMNDLPD---TQVFICTSPL-LKYHHCVGEKYRW-----------VE-QHLGP------------- 120 (193)
T ss_dssp TTCCBCTTHHHHHHHHHTSTT---EEEEEEECCC-SSCTTTHHHHHHH-----------HH-HHHCH-------------
T ss_pred ccCccCcCHHHHHHHHHhCCC---CeEEEEeCCC-hhhHHHHHHHhCc-----------hh-hhcCH-------------
Confidence 3578999999999999998 8 9999999986 5667777776553 21 11111
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccc----hhhhh-hcCcc-EEE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGD----LLCLL-EADIG-IVI 502 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~D----l~~l~-~Ad~g-iv~ 502 (564)
. .++..+. .+.++++||||.+| +.+.. .|++. |.+
T Consensus 121 ~----~~~~~~~-~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~ 161 (193)
T 2i7d_A 121 Q----FVERIIL-TRDKTVVLGDLLIDDKDTVRGQEETPSWEHILF 161 (193)
T ss_dssp H----HHTTEEE-CSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEE
T ss_pred H----HHHHcCC-CcccEEEECCchhhCcHHHhhcccccccceEEE
Confidence 1 2222232 24789999999999 88887 78773 444
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.08 E-value=7.8e-06 Score=91.54 Aligned_cols=91 Identities=22% Similarity=0.279 Sum_probs=75.5
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 465 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 465 (564)
-++||+..+.++.++++| +++.++|+.- ....+.+.++.|++ .++++ ..+.+|.+.+
T Consensus 456 D~l~~~~~~~i~~L~~~G---i~v~~~TGd~-~~~a~~ia~~lgi~--~~~~~-----------------~~P~~K~~~v 512 (645)
T 3j08_A 456 DTLKESAKPAVQELKRMG---IKVGMITGDN-WRSAEAISRELNLD--LVIAE-----------------VLPHQKSEEV 512 (645)
T ss_dssp CCCTTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCS--EEECS-----------------CCTTCHHHHH
T ss_pred CCchhHHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCCC--EEEEe-----------------CCHHhHHHHH
Confidence 369999999999999999 9999999985 88899999888863 22221 1345899999
Q ss_pred HHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 466 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 466 ~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
+++... ..++++|||.||.+|+..||+||.++..
T Consensus 513 ~~l~~~------~~v~~vGDg~ND~~al~~A~vgiamg~g 546 (645)
T 3j08_A 513 KKLQAK------EVVAFVGDGINDAPALAQADLGIAVGSG 546 (645)
T ss_dssp HHHTTT------CCEEEEECSSSCHHHHHHSSEEEEECCC
T ss_pred HHHhhC------CeEEEEeCCHhHHHHHHhCCEEEEeCCC
Confidence 988753 5799999999999999999999999844
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=98.07 E-value=3.5e-05 Score=76.11 Aligned_cols=98 Identities=14% Similarity=0.182 Sum_probs=65.3
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhc--C-------CCceeEEeeceeecCccccccccccC
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSA--G-------LNALNVHANEFSFKESISTGEIIEKV 455 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~--g-------~~~~~I~aN~l~~~~g~~tG~~~~~~ 455 (564)
...+.||..++++. | +++.|+|.+. ...++.+++.. | ++....+.. .|+. ..+|
T Consensus 123 ~~~~~pgv~e~L~~----g---~~l~i~Tn~~-~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~--~f~~-~~~g------ 185 (253)
T 2g80_A 123 KAPVYADAIDFIKR----K---KRVFIYSSGS-VKAQKLLFGYVQDPNAPAHDSLDLNSYIDG--YFDI-NTSG------ 185 (253)
T ss_dssp CBCCCHHHHHHHHH----C---SCEEEECSSC-HHHHHHHHHSBCCTTCTTSCCBCCGGGCCE--EECH-HHHC------
T ss_pred cCCCCCCHHHHHHc----C---CEEEEEeCCC-HHHHHHHHHhhcccccccccccchHhhcce--EEee-eccC------
Confidence 46789999999988 6 9999999985 88888888865 3 000000100 0110 1112
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc-EEE
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVI 502 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~ 502 (564)
+--....+...++..+.. +.++++||||.+|+.+...||+. |.+
T Consensus 186 --~KP~p~~~~~a~~~lg~~-p~~~l~vgDs~~di~aA~~aG~~~i~v 230 (253)
T 2g80_A 186 --KKTETQSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLA 230 (253)
T ss_dssp --CTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEE
T ss_pred --CCCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 111245666677776663 57999999999999999999984 444
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.5e-05 Score=73.54 Aligned_cols=105 Identities=11% Similarity=0.102 Sum_probs=72.6
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCH---------------HHHHHHHhhcCCCceeEEeeceeecCccccc
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG---------------DLIRASFSSAGLNALNVHANEFSFKESISTG 449 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~---------------~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG 449 (564)
.+.+.||..++++.++++| +++.|+|.+- . ..++..+++.|.....++.......+
T Consensus 25 ~~~~~~g~~~~l~~L~~~g---~~~~i~Tn~~-~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~----- 95 (179)
T 3l8h_A 25 EWIALPGSLQAIARLTQAD---WTVVLATNQS-GLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDD----- 95 (179)
T ss_dssp GCCBCTTHHHHHHHHHHTT---CEEEEEEECT-TTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTS-----
T ss_pred HceECcCHHHHHHHHHHCC---CEEEEEECCC-ccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCC-----
Confidence 4678999999999999999 9999999874 3 56777787777212333321111000
Q ss_pred cccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEc
Q 008479 450 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 503 (564)
Q Consensus 450 ~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~ 503 (564)
.+..+-.+...++..++..+. .+.++++||||.+|+.++..|++ .|.+.
T Consensus 96 ----~~~~~KP~~~~~~~~~~~~~~-~~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 145 (179)
T 3l8h_A 96 ----GCACRKPLPGMYRDIARRYDV-DLAGVPAVGDSLRDLQAAAQAGCAPWLVQ 145 (179)
T ss_dssp ----CCSSSTTSSHHHHHHHHHHTC-CCTTCEEEESSHHHHHHHHHHTCEEEEES
T ss_pred ----CCCCCCCCHHHHHHHHHHcCC-CHHHEEEECCCHHHHHHHHHCCCcEEEEC
Confidence 011122244677777777776 35889999999999999999998 34454
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=98.03 E-value=7.2e-06 Score=94.91 Aligned_cols=110 Identities=18% Similarity=0.152 Sum_probs=79.3
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCc-cccc-ccc--------ccCC
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKES-ISTG-EII--------EKVE 456 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g-~~tG-~~~--------~~~~ 456 (564)
++||+..+.++.|++.| +++.++||.- ......+.++.|+....+-++.+...+. ..++ ++. ---+
T Consensus 535 p~R~ea~~aI~~l~~aG---I~v~MiTGD~-~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv 610 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLG---LSIKMLTGDA-VGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEV 610 (920)
T ss_dssp CCCHHHHHHHHHHHHHT---CEEEEEESSC-HHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESC
T ss_pred cccccHHHHHHHHhhcC---ceEEEEcCCC-HHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEe
Confidence 79999999999999999 9999999985 7888888888887421111122211110 0111 000 0124
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
++.+|.+.++.+.+. +..+.++|||.||.+||+.||+||+++..
T Consensus 611 ~P~~K~~iV~~Lq~~-----g~~Vam~GDGvNDapaLk~AdvGIAmg~g 654 (920)
T 1mhs_A 611 FPQHKYNVVEILQQR-----GYLVAMTGDGVNDAPSLKKADTGIAVEGS 654 (920)
T ss_dssp CSTHHHHHHHHHHTT-----TCCCEECCCCGGGHHHHHHSSEEEEETTS
T ss_pred CHHHHHHHHHHHHhC-----CCeEEEEcCCcccHHHHHhCCcCcccccc
Confidence 567999999998863 35788999999999999999999999854
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=1.3e-05 Score=75.08 Aligned_cols=84 Identities=15% Similarity=0.299 Sum_probs=68.1
Q ss_pred HHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCC
Q 008479 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 474 (564)
Q Consensus 395 fl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~ 474 (564)
+++.++++| ++++|+|++. ...++.+++..|+. .++. .+..|...++.+++..+.
T Consensus 61 ~l~~L~~~g---~~v~ivT~~~-~~~~~~~l~~lgl~--~~~~-------------------~~kpk~~~~~~~~~~~g~ 115 (188)
T 2r8e_A 61 GIRCALTSD---IEVAIITGRK-AKLVEDRCATLGIT--HLYQ-------------------GQSNKLIAFSDLLEKLAI 115 (188)
T ss_dssp HHHHHHTTT---CEEEEECSSC-CHHHHHHHHHHTCC--EEEC-------------------SCSCSHHHHHHHHHHHTC
T ss_pred HHHHHHHCC---CeEEEEeCCC-hHHHHHHHHHcCCc--eeec-------------------CCCCCHHHHHHHHHHcCC
Confidence 788888888 9999999985 67899999888763 2221 124588889998888776
Q ss_pred CCCccEEEEcCCccchhhhhhcCccEEEcC
Q 008479 475 DRKNLSVYIGDSVGDLLCLLEADIGIVIGS 504 (564)
Q Consensus 475 ~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~ 504 (564)
+ +.+++|||||.+|+.++..|+++++++.
T Consensus 116 ~-~~~~~~iGD~~~Di~~a~~ag~~~~~~~ 144 (188)
T 2r8e_A 116 A-PENVAYVGDDLIDWPVMEKVGLSVAVAD 144 (188)
T ss_dssp C-GGGEEEEESSGGGHHHHTTSSEEEECTT
T ss_pred C-HHHEEEECCCHHHHHHHHHCCCEEEecC
Confidence 3 4789999999999999999999988863
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.1e-05 Score=91.43 Aligned_cols=91 Identities=22% Similarity=0.279 Sum_probs=75.5
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHH
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 465 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 465 (564)
-++||+..+.++.++++| ++++++|+.- ....+.+.++.|++ .++++ ..+.+|.+.+
T Consensus 534 D~~~~~~~~~i~~l~~~G---i~v~~~TGd~-~~~a~~ia~~lgi~--~~~~~-----------------~~P~~K~~~v 590 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMG---IKVGMITGDN-WRSAEAISRELNLD--LVIAE-----------------VLPHQKSEEV 590 (723)
T ss_dssp CCSCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCS--EEECS-----------------CCTTCHHHHH
T ss_pred CCcchhHHHHHHHHHHCC---CEEEEECCCC-HHHHHHHHHHcCCc--EEEcc-----------------CCHHHHHHHH
Confidence 379999999999999999 9999999885 78899998888863 22222 1345899999
Q ss_pred HHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 466 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 466 ~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
+++... ..+.++|||.||.+|+..||+||.++..
T Consensus 591 ~~l~~~------~~v~~vGDg~ND~~al~~A~vgiamg~g 624 (723)
T 3j09_A 591 KKLQAK------EVVAFVGDGINDAPALAQADLGIAVGSG 624 (723)
T ss_dssp HHHTTT------CCEEEEECSSTTHHHHHHSSEEEECCCC
T ss_pred HHHhcC------CeEEEEECChhhHHHHhhCCEEEEeCCC
Confidence 988753 5799999999999999999999999744
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.00 E-value=1.1e-05 Score=94.93 Aligned_cols=106 Identities=19% Similarity=0.130 Sum_probs=79.0
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccc--------------
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEI-------------- 451 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~-------------- 451 (564)
-++|||..+.++.|++.| +++.++|+.- ......+.++.|+.... ...++...+|.-
T Consensus 602 D~lr~~~~~~I~~l~~~G---i~v~miTGD~-~~ta~~ia~~lgi~~~~-----~~i~~~~~~g~~~~~l~~~~~~~~~~ 672 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAG---IRVIMITGDN-KGTAIAICRRIGIFGEN-----EEVADRAYTGREFDDLPLAEQREACR 672 (995)
T ss_dssp CCBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHHTSSCTT-----CCCTTTEEEHHHHHTSCHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHcC---CEEEEECCCC-HHHHHHHHHHcCcCCCC-----CcccceEEEchhhhhCCHHHHHHHHh
Confidence 489999999999999999 9999999986 88888998888863210 000111222210
Q ss_pred ---cccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 452 ---IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 452 ---~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
..--++..+|.+.++.+.+. +..+.++|||.||.+|++.||+||+++..
T Consensus 673 ~~~v~~r~~P~~K~~~v~~l~~~-----g~~v~~~GDG~ND~~alk~Advgiamg~g 724 (995)
T 3ar4_A 673 RACCFARVEPSHKSKIVEYLQSY-----DEITAMTGDGVNDAPALKKAEIGIAMGSG 724 (995)
T ss_dssp HCCEEESCCSSHHHHHHHHHHTT-----TCCEEEEECSGGGHHHHHHSTEEEEETTS
T ss_pred hCcEEEEeCHHHHHHHHHHHHHC-----CCEEEEEcCCchhHHHHHHCCeEEEeCCC
Confidence 00123467999999998863 36789999999999999999999999843
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.99 E-value=2.6e-05 Score=72.97 Aligned_cols=105 Identities=17% Similarity=0.190 Sum_probs=74.1
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccC--HHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCc
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--GDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPID 460 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s--~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 460 (564)
.+.+.||+.++++.++++| ++++|+|.+.. ...++.+++..|+.. ..|++..-.. .....+--
T Consensus 32 ~~~~~~g~~~~L~~L~~~g---~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~----------~~~~~~KP 98 (189)
T 3ib6_A 32 EVVLRKNAKETLEKVKQLG---FKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSEL----------QPGKMEKP 98 (189)
T ss_dssp TCCBCTTHHHHHHHHHHTT---CEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTS----------STTCCCTT
T ss_pred CceeCcCHHHHHHHHHHCC---CEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccc----------cccCCCCc
Confidence 4789999999999999999 99999998752 278999999988632 1222221100 00011122
Q ss_pred hHHHHHHHHHHhCCCCCccEEEEcCC-ccchhhhhhcCcc-EEEc
Q 008479 461 KVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIG-IVIG 503 (564)
Q Consensus 461 K~~~l~~l~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~g-iv~~ 503 (564)
+...++..++..+. .+.++++|||+ .+|+.++..+|+. |.+.
T Consensus 99 ~p~~~~~~~~~~~~-~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~ 142 (189)
T 3ib6_A 99 DKTIFDFTLNALQI-DKTEAVMVGNTFESDIIGANRAGIHAIWLQ 142 (189)
T ss_dssp SHHHHHHHHHHHTC-CGGGEEEEESBTTTTHHHHHHTTCEEEEEC
T ss_pred CHHHHHHHHHHcCC-CcccEEEECCCcHHHHHHHHHCCCeEEEEC
Confidence 44677777777766 35889999999 7999999999995 4443
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=1e-05 Score=75.13 Aligned_cols=106 Identities=17% Similarity=0.204 Sum_probs=68.5
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccc---------------cCHHHHHHHHhhcCCCceeEE-eeceeecCcccc
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYC---------------WCGDLIRASFSSAGLNALNVH-ANEFSFKESIST 448 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g---------------~s~~~I~~~l~~~g~~~~~I~-aN~l~~~~g~~t 448 (564)
.+.+.||+.++++.++++| ++++|+|.+ . ...++.+++..|+....|+ |-... .+. .
T Consensus 40 ~~~~~pg~~e~L~~L~~~G---~~l~i~Tn~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gl~fd~v~~s~~~~-~~~--~ 112 (176)
T 2fpr_A 40 KLAFEPGVIPQLLKLQKAG---YKLVMITNQDGLGTQSFPQADFDGP-HNLMMQIFTSQGVQFDEVLICPHLP-ADE--C 112 (176)
T ss_dssp GCCBCTTHHHHHHHHHHTT---EEEEEEEECTTTTBTTBCHHHHHHH-HHHHHHHHHHTTCCEEEEEEECCCG-GGC--C
T ss_pred HCcCCccHHHHHHHHHHCC---CEEEEEECCccccccccchHhhhhh-HHHHHHHHHHcCCCeeEEEEcCCCC-ccc--c
Confidence 4678999999999999998 999999997 4 6788899998887522332 20000 000 0
Q ss_pred ccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc-EEEcCC
Q 008479 449 GEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGSS 505 (564)
Q Consensus 449 G~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~~~~ 505 (564)
| ..--|...++.+++..+. .+.+++||||+.+|+.++..+++. |.+...
T Consensus 113 ~-------~~KP~p~~~~~~~~~~gi-~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 113 D-------CRKPKVKLVERYLAEQAM-DRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp S-------SSTTSCGGGGGGC----C-CGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred c-------ccCCCHHHHHHHHHHcCC-CHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 0 001122333334444444 247899999999999999999994 555433
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.95 E-value=8.6e-07 Score=85.20 Aligned_cols=45 Identities=18% Similarity=0.258 Sum_probs=38.4
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCC-ccchhhhhhcCccEEE
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGIVI 502 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~giv~ 502 (564)
.+..|...++.+++..+.+ +.++++|||| .||+.|+..|+++++.
T Consensus 174 ~~kpk~~~~~~~~~~lgi~-~~~~i~iGD~~~nDi~~~~~aG~~~~~ 219 (250)
T 2c4n_A 174 VGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETIL 219 (250)
T ss_dssp CSTTSTHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCEEEE
T ss_pred eCCCCHHHHHHHHHHcCCC-cceEEEECCCchhHHHHHHHcCCeEEE
Confidence 4566889999999888874 5899999999 7999999999998655
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=97.91 E-value=2.2e-06 Score=80.91 Aligned_cols=84 Identities=10% Similarity=0.039 Sum_probs=57.3
Q ss_pred cCCCCccHHHHHHHHHHc-CCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 385 RLSLQDGCTTFFQKVVKN-ENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~-g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
.+.+.||+.++++.++++ | +++.|+|.+. ...++..+++.|+... .|.
T Consensus 73 ~~~~~~g~~e~L~~L~~~~g---~~~~ivT~~~-~~~~~~~l~~~~l~~~----------------~f~----------- 121 (197)
T 1q92_A 73 ELEPLPGAVEAVKEMASLQN---TDVFICTSPI-KMFKYCPYEKYAWVEK----------------YFG----------- 121 (197)
T ss_dssp TCCBCTTHHHHHHHHHHSTT---EEEEEEECCC-SCCSSHHHHHHHHHHH----------------HHC-----------
T ss_pred cCCcCcCHHHHHHHHHhcCC---CeEEEEeCCc-cchHHHHHHHhchHHH----------------hch-----------
Confidence 578999999999999998 8 9999999986 4556666665443110 000
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccc----hhhhh-hcCcc-EEE
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGD----LLCLL-EADIG-IVI 502 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~D----l~~l~-~Ad~g-iv~ 502 (564)
....+..+. .+.++++||||..| +.+.. .|++. |.+
T Consensus 122 --~~~~~~l~~-~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~ 163 (197)
T 1q92_A 122 --PDFLEQIVL-TRDKTVVSADLLIDDRPDITGAEPTPSWEHVLF 163 (197)
T ss_dssp --GGGGGGEEE-CSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEE
T ss_pred --HHHHHHhcc-CCccEEEECcccccCCchhhhcccCCCceEEEe
Confidence 011112222 24678999999999 98888 88874 444
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.4e-05 Score=69.78 Aligned_cols=98 Identities=17% Similarity=0.091 Sum_probs=67.0
Q ss_pred CccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchHHHHH
Q 008479 389 QDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 466 (564)
Q Consensus 389 r~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 466 (564)
.||+.++++.++++| ++++|+|.+. ...++.+++..|+.. ..+++..- ....-.+...++
T Consensus 20 ~~~~~~~l~~L~~~G---~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~i~~~~~--------------~~~~Kp~~~~~~ 81 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNG---VGTVILSNDP-GGLGAAPIRELETNGVVDKVLLSGE--------------LGVEKPEEAAFQ 81 (137)
T ss_dssp HHHHHHHHHHHHHTT---CEEEEEECSC-CGGGGHHHHHHHHTTSSSEEEEHHH--------------HSCCTTSHHHHH
T ss_pred CccHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHCChHhhccEEEEecc--------------CCCCCCCHHHHH
Confidence 467788999999998 9999999986 566777777665421 12332210 001112345677
Q ss_pred HHHHHhCCCCCccEEEEcCCccchhhhhhcCcc-EEEcCC
Q 008479 467 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGSS 505 (564)
Q Consensus 467 ~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~~~~ 505 (564)
..++..+. .+.++++|||+.+|+.++..+++. +.+...
T Consensus 82 ~~~~~~~~-~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~ 120 (137)
T 2pr7_A 82 AAADAIDL-PMRDCVLVDDSILNVRGAVEAGLVGVYYQQF 120 (137)
T ss_dssp HHHHHTTC-CGGGEEEEESCHHHHHHHHHHTCEEEECSCH
T ss_pred HHHHHcCC-CcccEEEEcCCHHHHHHHHHCCCEEEEeCCh
Confidence 77777665 357899999999999999999984 444433
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.88 E-value=1e-05 Score=93.46 Aligned_cols=104 Identities=19% Similarity=0.201 Sum_probs=77.5
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCcccccc----------cc---
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGE----------II--- 452 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~----------~~--- 452 (564)
=++||+..+.++.|++.| +++.++||.- ......+.++.|+.. .++ ++...+|. +.
T Consensus 487 Dp~R~~a~~aI~~l~~aG---I~v~MiTGD~-~~tA~~iA~~lGi~~-~~~------~~~~l~g~~~~~~~~~~~l~~~~ 555 (885)
T 3b8c_A 487 DPPRHDSAETIRRALNLG---VNVKMITGDQ-LAIGKETGRRLGMGT-NMY------PSSALLGTHKDANLASIPVEELI 555 (885)
T ss_dssp CCCCHHHHHHHHHHHHTT---CCCEEEESSC-HHHHTHHHHTTTCTT-CCS------TTSSCCBGGGGTTSCCSCHHHHH
T ss_pred cccchhHHHHHHHHHHcC---CcEEEEcCCC-hHHHHHHHHHhCCcc-ccC------CcceeeccccccccchhHHHHHH
Confidence 379999999999999999 9999999985 788888888888732 110 01111110 00
Q ss_pred -----ccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 453 -----EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 453 -----~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
---+++.+|.+.++.+.+. +..+.++|||.||.+||+.||+||+++..
T Consensus 556 ~~~~v~arv~P~~K~~iV~~lq~~-----g~~Vam~GDGvNDapaLk~AdvGIAmg~g 608 (885)
T 3b8c_A 556 EKADGFAGVFPEHKYEIVKKLQER-----KHIVGMTGDGVNDAPALKKADIGIAVADA 608 (885)
T ss_dssp HTSCCEECCCHHHHHHHHHHHHHT-----TCCCCBCCCSSTTHHHHHHSSSCCCCSSS
T ss_pred hhCcEEEEECHHHHHHHHHHHHHC-----CCeEEEEcCCchhHHHHHhCCEeEEeCCc
Confidence 0013446899999998863 35688999999999999999999999854
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.84 E-value=0.0001 Score=72.99 Aligned_cols=88 Identities=9% Similarity=0.146 Sum_probs=55.0
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccC--HHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--GDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s--~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
...+.||..++++.++++| +++.|+|+... ...+...|...|+.. |...++.+ .+.- ..|.
T Consensus 99 ~~~~~pg~~e~L~~L~~~G---i~i~iaTnr~~~~~~~~~~~L~~~Gl~~--v~~~~vi~-----~~~~-------~~K~ 161 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKG---VDIYYISNRKTNQLDATIKNLERVGAPQ--ATKEHILL-----QDPK-------EKGK 161 (258)
T ss_dssp CCEECTTHHHHHHHHHHTT---CEEEEEEEEEGGGHHHHHHHHHHHTCSS--CSTTTEEE-----ECTT-------CCSS
T ss_pred CCCcCccHHHHHHHHHHCC---CEEEEEcCCchhHHHHHHHHHHHcCCCc--CCCceEEE-----CCCC-------CCCc
Confidence 4578899999999999999 99999998741 456677777777641 00111111 1110 0122
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhh
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCL 493 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l 493 (564)
.....+... + ...++|||||.+|+.+.
T Consensus 162 ~~~~~~~~~-~---~~~~l~VGDs~~Di~aA 188 (258)
T 2i33_A 162 EKRRELVSQ-T---HDIVLFFGDNLSDFTGF 188 (258)
T ss_dssp HHHHHHHHH-H---EEEEEEEESSGGGSTTC
T ss_pred HHHHHHHHh-C---CCceEEeCCCHHHhccc
Confidence 222223221 1 24588999999999987
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.82 E-value=3.8e-05 Score=90.46 Aligned_cols=109 Identities=18% Similarity=0.206 Sum_probs=75.4
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEE---ee--ceee-----c---Ccccccc
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVH---AN--EFSF-----K---ESISTGE 450 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~---aN--~l~~-----~---~g~~tG~ 450 (564)
=++||+..+.++.|++.| +++.++||.- ......+.++.|+... ..+ +. ...+ + ..+.+|.
T Consensus 598 Dplr~~~~~aI~~l~~aG---I~v~miTGD~-~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~ 673 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSAG---IKVIMVTGDH-PITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGS 673 (1028)
T ss_dssp CCBCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHH
T ss_pred CCCChhHHHHHHHHHHcC---CEEEEECCCC-HHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcH
Confidence 479999999999999999 9999999985 7788888888776310 000 00 0000 0 0011111
Q ss_pred -------------------ccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 451 -------------------IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 451 -------------------~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
...--.++.+|.+.++.+.+. +..+.++|||.||.+||+.||+||+++
T Consensus 674 ~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-----g~~V~~iGDG~ND~paLk~AdvGIAmg 740 (1028)
T 2zxe_A 674 DLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-----GAIVAVTGDGVNDSPALKKADIGVAMG 740 (1028)
T ss_dssp HHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-----TCCEEEEECSGGGHHHHHHSSEEEEES
T ss_pred HhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhC-----CCEEEEEcCCcchHHHHHhCCceEEeC
Confidence 000013456899999988763 357889999999999999999999998
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.66 E-value=9.3e-05 Score=87.22 Aligned_cols=109 Identities=18% Similarity=0.163 Sum_probs=73.7
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeE------------Eeeceeec---Ccccccc
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNV------------HANEFSFK---ESISTGE 450 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I------------~aN~l~~~---~g~~tG~ 450 (564)
=++||+..+.++.|++.| ++++++||-- ..-+..+.++.|+..... ..+...-+ ....+|.
T Consensus 603 Dp~r~~~~~aI~~l~~aG---I~vvmiTGd~-~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~ 678 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAG---IRVIMVTGDH-PITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGM 678 (1034)
T ss_pred CCCchhHHHHHHHHHHcC---CeEEEEeCCC-HHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecH
Confidence 379999999999999999 9999999874 677888888877631100 00000000 0011111
Q ss_pred c-------------------cccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 451 I-------------------IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 451 ~-------------------~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
. ..--++..+|.++++.+.+. +..+.++|||.||.+||+.||+||+++
T Consensus 679 ~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-----g~~V~a~GDG~ND~~mLk~A~vGIAMg 745 (1034)
T 3ixz_A 679 QLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-----GAIVAVTGDGVNDSPALKKADIGVAMG 745 (1034)
T ss_pred hhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHc-----CCEEEEECCcHHhHHHHHHCCeeEEeC
Confidence 0 00012345788888877652 356889999999999999999999998
|
| >2q32_A Heme oxygenase 2, HO-2; structural genomics medical relevance, structural genomics community request, protein structure in PSI; HET: OXN; 2.40A {Homo sapiens} PDB: 2qpp_A* 2rgz_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0027 Score=62.80 Aligned_cols=205 Identities=14% Similarity=0.072 Sum_probs=115.8
Q ss_pred CCCCcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 008479 9 PSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELR 88 (564)
Q Consensus 9 ~~~~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~ 88 (564)
..+...+|+++|-......-..+-++||+..+..|+++.+.+..||.|=|++....-.+...... ++....+.. .
T Consensus 26 ~~~~~~~~~~~Lr~~T~~~H~~~e~~~~~~~ll~g~~~~e~Y~~~L~~~y~vy~~LE~~l~~~~~---~p~l~~~~~--~ 100 (264)
T 2q32_A 26 NQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMERNKD---HPAFAPLYF--P 100 (264)
T ss_dssp ---CTTSHHHHHHHHSHHHHHHHHTCHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTT---CTTTGGGCC--H
T ss_pred cCCCcccHHHHHHHHHHHHHHHHHccHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHccc---ChHhHhhcC--H
Confidence 34455689999988876665666789999999999999999999999999988876665554321 110000000 0
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHH-
Q 008479 89 KGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY- 167 (564)
Q Consensus 89 ~~i~~E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y- 167 (564)
..+.+.-.+-+++..-.|-+..+...|+|++..|+.++..++..+. ..+++.++ -+|
T Consensus 101 ~el~R~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia~~~P-------------------~~llgh~Y---v~y~ 158 (264)
T 2q32_A 101 MELHRKEALTKDMEYFFGENWEEQVQAPKAAQKYVERIHYIGQNEP-------------------ELLVAHAY---TRYM 158 (264)
T ss_dssp HHHCCHHHHHHHHHHHHCTTGGGGCCCCHHHHHHHHHHHHHHHHCG-------------------GGHHHHHH---HHHH
T ss_pred hhhhhHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCH-------------------HHHHHHHH---HHHH
Confidence 0011111111222222265544457789999999999998775332 12233322 334
Q ss_pred HHH------HHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhc
Q 008479 168 AFL------GKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFC 241 (564)
Q Consensus 168 ~~i------~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~ 241 (564)
..+ ++.+.+..+.. +...=-.+..++...+-...-..+.+.||++ .+++++++++.+-=..+-++=.+-++
T Consensus 159 g~lsGGqii~k~l~k~lgL~-~~~~g~~Fy~f~g~~d~~~~k~~fr~~Ld~l--~ld~ee~~~iI~eA~~aF~ln~~if~ 235 (264)
T 2q32_A 159 GDLSGGQVLKKVAQRALKLP-STGEGTQFYLFENVDNAQQFKQLYRARMNAL--DLNMKTKERIVEEANKAFEYNMQIFN 235 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTCC-TTCTTCGGGCCTTCSCHHHHHHHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHhcCCC-CCCccceeeccCCCCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 33333322211 1011123334454333345566788889886 46888877776665555555455554
Q ss_pred cC
Q 008479 242 AQ 243 (564)
Q Consensus 242 ~a 243 (564)
..
T Consensus 236 eL 237 (264)
T 2q32_A 236 EL 237 (264)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.51 E-value=8.1e-05 Score=74.21 Aligned_cols=55 Identities=18% Similarity=0.254 Sum_probs=47.7
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
.+.+|...|+.+++..+.+ .+.+++||||.||++|+..|++||+++ +.+.+++.|
T Consensus 206 ~~~~K~~al~~l~~~lgi~-~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A 261 (285)
T 3pgv_A 206 GGVSKGHALEAVAKMLGYT-LSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLH 261 (285)
T ss_dssp TTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHC
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhC
Confidence 4668999999999988874 478999999999999999999999998 556777666
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.48 E-value=8.5e-05 Score=72.97 Aligned_cols=55 Identities=22% Similarity=0.314 Sum_probs=46.7
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
.+.+|...|+.+++..+.+ .+++++||||.||++|+..|++||+++ +.+.+++.|
T Consensus 191 ~~~~K~~~l~~l~~~lgi~-~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~A 246 (268)
T 3r4c_A 191 AGTSKATGLSLFADYYRVK-VSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVA 246 (268)
T ss_dssp TTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTC
T ss_pred CCCCHHHHHHHHHHHcCCC-HHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhc
Confidence 4668999999999988874 578999999999999999999999998 445666544
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=97.48 E-value=9.7e-05 Score=72.29 Aligned_cols=56 Identities=25% Similarity=0.386 Sum_probs=47.0
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
..+.+|...++.+.+..+.+ .+++++||||.||++|+..|++||+++ +.+.+++.|
T Consensus 179 ~~~~~K~~~l~~l~~~lgi~-~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A 235 (258)
T 2pq0_A 179 PAGGSKAEGIRMMIEKLGID-KKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVA 235 (258)
T ss_dssp ESSCCHHHHHHHHHHHHTCC-GGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTC
T ss_pred ECCCChHHHHHHHHHHhCCC-HHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhC
Confidence 45778999999999988874 478999999999999999999999997 445565444
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=97.48 E-value=3.8e-05 Score=73.56 Aligned_cols=92 Identities=8% Similarity=0.027 Sum_probs=52.1
Q ss_pred CCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcC--CCceeEEeeceeecCccccccccccCCCCCchHHHH
Q 008479 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAG--LNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 465 (564)
Q Consensus 388 lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g--~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 465 (564)
..||..++++.++++| +++.|+|++. ...++.+++... ++. ++++.-. ...+. .++ +...+
T Consensus 89 ~~~~~~e~l~~L~~~G---~~l~ivTn~~-~~~~~~~l~~l~~~f~~--i~~~~~~----~~~~~-~KP------~p~~~ 151 (211)
T 2b82_A 89 PKEVARQLIDMHVRRG---DAIFFVTGRS-PTKTETVSKTLADNFHI--PATNMNP----VIFAG-DKP------GQNTK 151 (211)
T ss_dssp ECHHHHHHHHHHHHHT---CEEEEEECSC-CCSSCCHHHHHHHHTTC--CTTTBCC----CEECC-CCT------TCCCS
T ss_pred CcHHHHHHHHHHHHCC---CEEEEEcCCc-HHHHHHHHHHHHHhcCc--cccccch----hhhcC-CCC------CHHHH
Confidence 4679999999999999 9999999874 222222222100 110 1011000 00010 011 11223
Q ss_pred HHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEE
Q 008479 466 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 501 (564)
Q Consensus 466 ~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 501 (564)
...++..+ - +++||||.+|+.+...|++..+
T Consensus 152 ~~~~~~~g----~-~l~VGDs~~Di~aA~~aG~~~i 182 (211)
T 2b82_A 152 SQWLQDKN----I-RIFYGDSDNDITAARDVGARGI 182 (211)
T ss_dssp HHHHHHTT----E-EEEEESSHHHHHHHHHTTCEEE
T ss_pred HHHHHHCC----C-EEEEECCHHHHHHHHHCCCeEE
Confidence 33444432 2 8999999999999999998433
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00037 Score=65.77 Aligned_cols=99 Identities=13% Similarity=-0.025 Sum_probs=65.5
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
....+.||+.++++.++++| +++.|+|+.. ...+...+. ..+ ..|+|.+ .. ..+--+..
T Consensus 33 ~~~~~~pg~~e~L~~L~~~g---~~~~i~T~~~-~~~~~~~~~-~~~--d~v~~~~-----~~---------~~~KP~p~ 91 (196)
T 2oda_A 33 EHAQLTPGAQNALKALRDQG---MPCAWIDELP-EALSTPLAA-PVN--DWMIAAP-----RP---------TAGWPQPD 91 (196)
T ss_dssp GGGSBCTTHHHHHHHHHHHT---CCEEEECCSC-HHHHHHHHT-TTT--TTCEECC-----CC---------SSCTTSTH
T ss_pred ccCCcCcCHHHHHHHHHHCC---CEEEEEcCCh-HHHHHHhcC-ccC--CEEEECC-----cC---------CCCCCChH
Confidence 34678899999999999999 9999999875 666644443 111 1222211 00 01111335
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 503 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~ 503 (564)
.+...+...+......++|||||.+|+.+...|++ .|.+.
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 55666666665333689999999999999999998 44453
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00015 Score=71.21 Aligned_cols=55 Identities=20% Similarity=0.404 Sum_probs=46.5
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
.+..|...++.+++..+.+ .+.+++||||.||++|+..|++||+++ +.+.+++.|
T Consensus 197 ~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A 252 (274)
T 3fzq_A 197 KDFHKGKAIKRLQERLGVT-QKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIA 252 (274)
T ss_dssp TTCSHHHHHHHHHHHHTCC-STTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHC
T ss_pred CCCCHHHHHHHHHHHcCCC-HHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhh
Confidence 4668999999999988874 578999999999999999999999998 445566544
|
| >1wov_A Heme oxygenase 2; HOMO dimer, oxidoreductase; HET: HEM; 1.75A {Synechocystis SP} SCOP: a.132.1.1 PDB: 1wow_A* 1wox_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.01 Score=58.17 Aligned_cols=193 Identities=18% Similarity=0.235 Sum_probs=112.5
Q ss_pred hHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 008479 15 GLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEE 94 (564)
Q Consensus 15 ~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i~~E 94 (564)
+|+++|-......-..+-++||+..+..|.++.+.++.||.|=|++....-.+... ..+.. .+... +..|
T Consensus 3 ~l~~~Lr~~T~~~H~~~e~~~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~~~~----~~~~p---~l~~~---~~~e 72 (250)
T 1wov_A 3 NLAQKLRYGTQQSHTLAENTAYMKCFLKGIVEREPFRQLLANLYYLYSALEAALRQ----HRDNE---IISAI---YFPE 72 (250)
T ss_dssp CHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHH----TTTSH---HHHHH---CCGG
T ss_pred hHHHHHHHHHHHHHHHHHchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH----hccCh---hhhhh---ccHh
Confidence 57888877765555555578999999999999999999999998887765554443 22211 11111 1112
Q ss_pred H----HHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHH-HH
Q 008479 95 L----KMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY-AF 169 (564)
Q Consensus 95 ~----~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y-~~ 169 (564)
+ .+-+++..-.|-+..+..+|+|++..|++++..++..+. ..+++.+ +-+| ..
T Consensus 73 l~R~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~~~~P-------------------~~llgh~---Yv~y~g~ 130 (250)
T 1wov_A 73 LNRTDKLAEDLTYYYGPNWQQIIQPTPCAKIYVDRLKTIAASEP-------------------ELLIAHC---YTRYLGD 130 (250)
T ss_dssp GCCHHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCG-------------------GGHHHHH---HHHHHHH
T ss_pred hhhHHHHHHHHHHHcCCCccccCCCChHHHHHHHHHHHHhhcCH-------------------HHHHHHH---HHHHHHH
Confidence 1 111222222255444456899999999999998775332 1233333 3345 22
Q ss_pred ------HHHHHHhhccCCCCcccccccccccCCh---hHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhh
Q 008479 170 ------LGKEFHALLNANEGNHPYTKWIDNYSSE---SFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240 (564)
Q Consensus 170 ------i~~~~~~~~~~~~~~~~y~~Wi~~y~s~---~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw 240 (564)
|++.+.+..+. +...=-.+..++..+ +-...-..+.+.||++ .+++++++++.+-=..+-++=.+-+
T Consensus 131 lsGGq~i~~~l~k~l~L--~~~~g~~fy~f~~~~~~~d~~~~k~~fr~~Ld~l--~l~~~e~~~ii~eA~~aF~ln~~if 206 (250)
T 1wov_A 131 LSGGQSLKNIIRSALQL--PEGEGTAMYEFDSLPTPGDRRQFKEIYRDVLNSL--PLDEATINRIVEEANYAFSLNREVM 206 (250)
T ss_dssp TTHHHHHHHHHHHHTTC--CTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHhcCC--CCcccceeeccCCccccccHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 23333332221 111112233444433 4455677888999987 4688888777766666665555555
Q ss_pred ccC
Q 008479 241 CAQ 243 (564)
Q Consensus 241 ~~a 243 (564)
+..
T Consensus 207 ~eL 209 (250)
T 1wov_A 207 HDL 209 (250)
T ss_dssp HTT
T ss_pred HHH
Confidence 544
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00017 Score=72.63 Aligned_cols=73 Identities=14% Similarity=0.236 Sum_probs=55.0
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHHhhCCceeecC---chhHHhHH
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLY---PGLVKKQK 531 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~~~gi~~~p~~---~~~~~~~~ 531 (564)
..+.+|...|+.+++..+.+ .+.+++||||.||++|+..|++||+++ +.+.+++.| .++--+ +|+...++
T Consensus 224 ~~~~~K~~al~~l~~~lgi~-~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~A-----d~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 224 TKGLHKGWALQQLLKRWNFT-SDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAA-----NYQAKSNDESGVLDVID 297 (304)
T ss_dssp ETTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHC-----SEECCCGGGTHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHhCcC-HHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhc-----cEEcCCCCcchHHHHHH
Confidence 34668999999999988874 578999999999999999999999998 445666555 233222 35665565
Q ss_pred hhh
Q 008479 532 EYT 534 (564)
Q Consensus 532 ~~~ 534 (564)
.+.
T Consensus 298 ~~~ 300 (304)
T 3l7y_A 298 NYL 300 (304)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00012 Score=76.70 Aligned_cols=111 Identities=13% Similarity=0.020 Sum_probs=70.7
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce----eEEeeceeecCccccccccccCCCCCc
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL----NVHANEFSFKESISTGEIIEKVESPID 460 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~----~I~aN~l~~~~g~~tG~~~~~~~~g~~ 460 (564)
.+.+.||+.++++.++++| +++.|+|++. ...++..++..|+... .|+|.+-....|...+... ..+--
T Consensus 213 ~~~l~pGv~elL~~Lk~~G---i~laIvTn~~-~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~k---p~~KP 285 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAG---FELGIATGRP-YTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQAR---PLGKP 285 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSC---CCCTT
T ss_pred CCCcCcCHHHHHHHHHhCC---CEEEEEeCCc-HHHHHHHHHHcCChHhcCCCEEEeccccccccccccccc---CCCCC
Confidence 5788999999999999999 9999999996 8899999998886321 3444331110000000000 00111
Q ss_pred hHHHHHHHHHHhC--------------CCCCccEEEEcCCccchhhhhhcCcc-EEEc
Q 008479 461 KVQAFNNTLEKYG--------------TDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 503 (564)
Q Consensus 461 K~~~l~~l~~~~~--------------~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~~ 503 (564)
+...+...+...+ . .+.++++||||.+|+.++..||+. |.+.
T Consensus 286 ~P~~~~~a~~~lg~~~~~~~~~~~~~~v-~p~e~l~VGDs~~Di~aAk~AG~~~I~V~ 342 (384)
T 1qyi_A 286 NPFSYIAALYGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTL 342 (384)
T ss_dssp STHHHHHHHHCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred CHHHHHHHHHHcCCccccccccccccCC-CCcCeEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 1233333333332 2 357899999999999999999985 4443
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0016 Score=59.93 Aligned_cols=28 Identities=4% Similarity=0.137 Sum_probs=24.4
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccc
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYC 415 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g 415 (564)
..+.+.||+.++++.+++ + +++.|+|++
T Consensus 66 ~~~~~~pg~~e~L~~L~~-~---~~~~i~T~~ 93 (180)
T 3bwv_A 66 RNLDVMPHAQEVVKQLNE-H---YDIYIATAA 93 (180)
T ss_dssp GSCCBCTTHHHHHHHHTT-T---SEEEEEECC
T ss_pred ccCCCCcCHHHHHHHHHh-c---CCEEEEeCC
Confidence 357899999999999986 5 899999986
|
| >1j02_A Heme oxygenase 1; alpha helix, O2-analog bound form, oxidoreductase; HET: HEM; 1.70A {Rattus norvegicus} SCOP: a.132.1.1 PDB: 1irm_C 1dve_A* 1ix3_A* 1ivj_A* 1ix4_A* 1j2c_A* 1ubb_A* 1ulx_A* 1vgi_A* 2dy5_A* 2e7e_A* 2zvu_A* 1dvg_A* 3i9t_A* 3i9u_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.013 Score=58.10 Aligned_cols=200 Identities=15% Similarity=0.115 Sum_probs=112.1
Q ss_pred cchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 008479 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVL 92 (564)
Q Consensus 13 ~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i~ 92 (564)
..+|+++|-......-..+-++||+..+..|.++.+.+..||.|=|++....-.+...... ++....+... ..+.
T Consensus 10 ~~~l~~~Lr~~T~~~H~~~E~~~~~~~l~~g~vs~e~Y~~~L~~~y~vy~aLE~~l~~~~~---~p~l~~~~~p--eel~ 84 (267)
T 1j02_A 10 SQDLSEALKEATKEVHIRAENSEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQ---NPVYAPLYFP--EELH 84 (267)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTT---CTTTGGGCCH--HHHC
T ss_pred chHHHHHHHHHHHHHHHHHHccHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHccc---CcHHHHhcCH--hhhh
Confidence 3479999988776655555689999999999999999999999999888876665554221 1100000000 0011
Q ss_pred HHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHH-HH--
Q 008479 93 EELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY-AF-- 169 (564)
Q Consensus 93 ~E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y-~~-- 169 (564)
+.-.+-.++..-.|-+..+...|.|++..|+.++..++..+. ..+++.+ +-+| ..
T Consensus 85 R~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia~~~P-------------------~~llgh~---Yv~y~g~ls 142 (267)
T 1j02_A 85 RRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVGGTHP-------------------ELLVAHA---YTRYLGDLS 142 (267)
T ss_dssp CHHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHHHHCG-------------------GGHHHHH---HHHHHHHTT
T ss_pred hHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCH-------------------HHHHHHH---HHHHHHHHH
Confidence 111111222222265544457889999999999998775332 1233333 2344 22
Q ss_pred ----HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhcc
Q 008479 170 ----LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCA 242 (564)
Q Consensus 170 ----i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~ 242 (564)
|++.+.+..+.. +...=-.+..++...+-...-..+.+.||++. +++++++++.+-=..+-++=.+-++.
T Consensus 143 GGqii~k~l~k~lgL~-~~~~gl~Fy~f~g~~d~~~~k~~fr~~Ld~l~--ld~ee~~~iI~eA~~aF~ln~~if~e 216 (267)
T 1j02_A 143 GGQVLKKIAQKAMALP-SSGEGLAFFTFPSIDNPTKFKQLYRARMNTLE--MTPEVKHRVTEEAKTAFLLNIELFEE 216 (267)
T ss_dssp HHHHHHHHHHHHHTCC-TTCTTCGGGCCTTCSCHHHHHHHHHHHHTTSC--CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC-CCCCcceeeccCCcCCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233333322211 10011233344443334455677888898763 68887777666555555544444443
|
| >1we1_A Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A {Synechocystis SP} SCOP: a.132.1.1 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0084 Score=58.44 Aligned_cols=195 Identities=13% Similarity=0.172 Sum_probs=111.7
Q ss_pred hHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHH
Q 008479 15 GLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK-GVLE 93 (564)
Q Consensus 15 ~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~-~i~~ 93 (564)
+|+++|-......-..+-++||++.+..|.++.+.+..||.|=|++....-.+...... ++ . +..... .+.+
T Consensus 4 ~l~~~Lr~~T~~~H~~~e~~~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~~~~~~~---~p-~---l~~~~~~el~R 76 (240)
T 1we1_A 4 NLASQLREGTKKSHSMAENVGFVKCFLKGVVEKNSYRKLVGNLYFVYSAMEEEMAKFKD---HP-I---LSHIYFPELNR 76 (240)
T ss_dssp CHHHHHHHHTHHHHHHHHTSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTT---ST-T---GGGGCCTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhccc---Cc-h---hHhhhhHhhhh
Confidence 58888887766555555588999999999999999999999999888866665554322 11 0 000000 0000
Q ss_pred HHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHH-HHH--
Q 008479 94 ELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY-AFL-- 170 (564)
Q Consensus 94 E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y-~~i-- 170 (564)
.-.+-+++..-.|-+..+..+|+|++..|+.++..++..+. ..+++.++ -+| ..+
T Consensus 77 ~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~~~~P-------------------~~llg~~Y---v~y~g~lsG 134 (240)
T 1we1_A 77 KQSLEQDLQFYYGSNWRQEVKISAAGQAYVDRVRQVAATAP-------------------ELLVAHSY---TRYLGDLSG 134 (240)
T ss_dssp HHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCG-------------------GGHHHHHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHhhcCH-------------------HHHHHHHH---HHHHHHHhH
Confidence 01111222222255543346789999999999998775332 12333333 334 222
Q ss_pred ----HHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 171 ----GKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 171 ----~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
++.+.+..+. ++. =-.+..++..++-...-..+.+.||++ .+++++++++.+-=..+-++=.+-+++.
T Consensus 135 Gq~i~~~~~~~l~L--~~~-g~~fy~f~~~~d~~~~k~~fr~~Ld~l--~l~~~e~~~ii~eA~~aF~~n~~if~eL 206 (240)
T 1we1_A 135 GQILKKIAQNAMNL--HDG-GTAFYEFADIDDEKAFKNTYRQAMNDL--PIDQATAERIVDEANDAFAMNMKMFNEL 206 (240)
T ss_dssp HHHHHHHHHHHHTC--SSS-SCGGGCCTTCSSHHHHHHHHHHHHHTC--CCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCc--Ccc-cchhcccCCcCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333332221 111 122334444333455667788899986 4688888777766666655555555544
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0004 Score=67.84 Aligned_cols=47 Identities=28% Similarity=0.250 Sum_probs=41.2
Q ss_pred CCchHHHHHHHHHHhCC-CCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 458 PIDKVQAFNNTLEKYGT-DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 458 g~~K~~~l~~l~~~~~~-~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
+.+|...++.+++..+. + ...+++||||.||++|+..|++||+++..
T Consensus 177 g~sKg~al~~l~~~~~~~~-~~~viafGD~~NDi~Ml~~ag~~va~gna 224 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLG-QIESYAVGDSYNDFPMFEVVDKVFIVGSL 224 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTS-CEEEEEEECSGGGHHHHTTSSEEEEESSC
T ss_pred CCChHHHHHHHHHHhccCC-CceEEEECCCcccHHHHHhCCcEEEeCCC
Confidence 67899999999987654 3 47899999999999999999999999743
|
| >1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site, oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP: a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A* 1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 3tgm_A* 1xjz_A* 1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A* ... | Back alignment and structure |
|---|
Probab=97.03 E-value=0.029 Score=54.33 Aligned_cols=197 Identities=14% Similarity=0.090 Sum_probs=109.3
Q ss_pred CcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCHHHHHHHHH
Q 008479 12 EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECA-----DDDDAKLSISE 86 (564)
Q Consensus 12 ~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a-----~~~~~~~~l~~ 86 (564)
...+|+++|-......-..+-+.||+..+..|+++.+.+..||.|=|++....-.+........ -.+++...
T Consensus 9 ~~~~l~~~Lr~~T~~~H~~~e~~~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~~~~~~~~~p~~~~~~~~~el~R--- 85 (233)
T 1n45_A 9 MPQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKESPVFAPVYFPEELHR--- 85 (233)
T ss_dssp -CCSHHHHHHHHTHHHHHHHHHSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTGGGCCHHHHCC---
T ss_pred CChHHHHHHHHHHHHHHHHHHccHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccCchhhhhcCHhhccc---
Confidence 3457999998877665555567999999999999999999999999998888776665533211 01111100
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHH
Q 008479 87 LRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRL 166 (564)
Q Consensus 87 ~~~~i~~E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~ 166 (564)
.-.+-.++..-.|-+..+..+|+|++..|+.++..++..+. .++.|+.=+.+.
T Consensus 86 -------~~~L~~DL~~l~g~~~~~~~~~~~a~~~yv~~i~~i~~~~P--------------------~~l~ah~Yv~Ye 138 (233)
T 1n45_A 86 -------KAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEP--------------------ELLVAHAYTRYL 138 (233)
T ss_dssp -------HHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHHHHCG--------------------GGHHHHHHHHHH
T ss_pred -------HHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCH--------------------HHHHHHHHHHHH
Confidence 00111122111233333356789999999999997764332 223332111111
Q ss_pred H-----HHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhc
Q 008479 167 Y-----AFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFC 241 (564)
Q Consensus 167 Y-----~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~ 241 (564)
= ..|++.+.+..+.. +...=-.+..++...+-..+-..+.+.||++. +++++++++.+-=..+-++=.+-++
T Consensus 139 G~~~GGq~i~~~~~~~l~L~-~~~~g~~f~~f~~~~~~~~~k~~fr~~Ld~~~--l~~~e~~~ii~eA~~aF~~n~~i~~ 215 (233)
T 1n45_A 139 GDLSGGQVLKKIAQKALDLP-SSGEGLAFFTFPNIASATKFKQLYRSRMNSLE--MTPAVRQRVIEEAKTAFLLNIQLFE 215 (233)
T ss_dssp HHHHHHHHHHHHHHHHHCCC-SCSCSCGGGCCTTCSCHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCC-CCCCcceeeccCCcCCHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 22333333322211 10011223334443334455555888999863 6888777766555555444444443
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00079 Score=65.55 Aligned_cols=54 Identities=15% Similarity=0.174 Sum_probs=45.4
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRV 511 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~ 511 (564)
.+.+|...++.+++..+.+ ...++++|||.||++|+..+++||+++ +.+.+++.
T Consensus 159 ~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~ 213 (244)
T 1s2o_A 159 QRSNKGNATQYLQQHLAME-PSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHW 213 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHH
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHH
Confidence 4668999999999887764 478999999999999999999999997 44566654
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00076 Score=66.58 Aligned_cols=73 Identities=16% Similarity=0.274 Sum_probs=53.6
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcC-ChhHHHHHHhhCCceeec---CchhHHhHHh
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGSQFGVTFIPL---YPGLVKKQKE 532 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~-~~~L~~~~~~~gi~~~p~---~~~~~~~~~~ 532 (564)
.+..|...++.+++..+.+ ...+++||||.||++|+..|++|++++. .+.+++.+ .++-- ..|+...++.
T Consensus 188 ~~~~K~~~~~~l~~~l~i~-~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a-----~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 188 PGLHKANGISRLLKRWDLS-PQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIA-----RYATDDNNHEGALNVIQA 261 (271)
T ss_dssp TTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHC-----SEECCCGGGTHHHHHHHH
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhC-----CeeCcCCCCChHHHHHHH
Confidence 4668999999999988774 4789999999999999999999999973 45555433 23322 2356655555
Q ss_pred hhc
Q 008479 533 YTE 535 (564)
Q Consensus 533 ~~~ 535 (564)
+..
T Consensus 262 ~~~ 264 (271)
T 1rlm_A 262 VLD 264 (271)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00077 Score=67.14 Aligned_cols=55 Identities=20% Similarity=0.308 Sum_probs=45.2
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcC-ChhHHHH
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRV 511 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~-~~~L~~~ 511 (564)
..+.+|...++.+++..+.+ ..++++||||.||+.|+..|++||+++. .+.+++.
T Consensus 212 ~~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~ 267 (288)
T 1nrw_A 212 SRKASKGQALKRLAKQLNIP-LEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSI 267 (288)
T ss_dssp ETTCSHHHHHHHHHHHTTCC-GGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHH
T ss_pred cCCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhh
Confidence 34678999999999888763 4789999999999999999999999973 3455543
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0008 Score=66.94 Aligned_cols=73 Identities=19% Similarity=0.365 Sum_probs=53.5
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcC-ChhHHHHHHhhCCceee---cCchhHHhHH
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGSQFGVTFIP---LYPGLVKKQK 531 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~-~~~L~~~~~~~gi~~~p---~~~~~~~~~~ 531 (564)
..+.+|...++.+++..+.+ ..++++||||.||++|+..|++||+++. .+.+++.+ .++- -..|+...++
T Consensus 194 ~~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a-----~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 194 DKRVNKGTGVKSLADVLGIK-PEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVA-----NFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp ETTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHC-----SEECCCTTTTHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCC-HHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhC-----CEEecCCCcchHHHHHH
Confidence 34678999999999888763 4789999999999999999999999974 34555433 2331 1246666666
Q ss_pred hhh
Q 008479 532 EYT 534 (564)
Q Consensus 532 ~~~ 534 (564)
.+.
T Consensus 268 ~~~ 270 (282)
T 1rkq_A 268 KYV 270 (282)
T ss_dssp HHT
T ss_pred HHH
Confidence 553
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0023 Score=62.43 Aligned_cols=41 Identities=15% Similarity=0.382 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCC-ccchhhhhhcCcc-EEEc
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIG-IVIG 503 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~g-iv~~ 503 (564)
...++..++..+.+ +.++++|||+ .+|+.++..+++. |.+.
T Consensus 186 p~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~v~ 228 (264)
T 1yv9_A 186 AIIMERAIAHLGVE-KEQVIMVGDNYETDIQSGIQNGIDSLLVT 228 (264)
T ss_dssp HHHHHHHHHHHCSC-GGGEEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred HHHHHHHHHHcCCC-HHHEEEECCCcHHHHHHHHHcCCcEEEEC
Confidence 45788888877763 5799999999 6999999999985 4454
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0012 Score=66.55 Aligned_cols=54 Identities=19% Similarity=0.296 Sum_probs=45.0
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcC-ChhHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRV 511 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~-~~~L~~~ 511 (564)
.+.+|...++.+++..+.+ ...+++||||.||++|+..|++||+++. .+.+++.
T Consensus 221 ~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~ 275 (301)
T 2b30_A 221 LGHDKYTGINYLLKHYNIS-NDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSH 275 (301)
T ss_dssp TTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHH
T ss_pred CCCCcHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhh
Confidence 4678999999999888763 4789999999999999999999999973 4455543
|
| >1wzd_A Heme oxygenase; electron-transfer, artificial metalloprotein; HET: YOK; 1.35A {Corynebacterium diphtheriae} SCOP: a.132.1.1 PDB: 1iw1_A* 1v8x_A* 1iw0_A* 1wzf_A* 1wzg_A* 2z68_A* 3i8r_A* 3moo_A* 1wnw_A* 1wnx_A* 1wnv_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.036 Score=52.96 Aligned_cols=187 Identities=16% Similarity=0.097 Sum_probs=105.2
Q ss_pred CcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCHHHHHHHHH
Q 008479 12 EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECA-----DDDDAKLSISE 86 (564)
Q Consensus 12 ~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a-----~~~~~~~~l~~ 86 (564)
...+|+++|-......-..+-++||+..+..|.++.+.+..||.|=|++....-.++....... -.+ ....
T Consensus 4 ~~~~l~~~Lr~~T~~~H~~~e~~~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~~~~~~~~~p~~~~~~~~-el~R--- 79 (215)
T 1wzd_A 4 ATAGLAVELKQSTAQAHEKAEHSTFMSDLLKGRLGVAEFTRLQEQAWLFYTALEQAVDAVRASGFAESLLDP-ALNR--- 79 (215)
T ss_dssp ---CHHHHHHHHTHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTSCG-GGCC---
T ss_pred ccHHHHHHHHHHHHHHHHHHHccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccCchhhhhccc-hhcc---
Confidence 4457999998877665555567899999999999999999999999999888777666543211 011 0000
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCc--ccccCCChhHHHHHHHHHHHhcCC-CCCCCCCCCCCCchhhhhhHHHHHHHHHHH
Q 008479 87 LRKGVLEELKMHDSFVKEWGTDL--AKMATVNSATVKYTEFLLATASGK-VEGVKGPGKLATPFEKTKVAAYTLGAMSPC 163 (564)
Q Consensus 87 ~~~~i~~E~~~h~~~~~~~gi~~--~~~~~~~pa~~~Y~~~l~~~a~~~-~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC 163 (564)
...+..-+ +.+|-+. .+...|+|++..|++++...+..+ . +..++.++.-
T Consensus 80 -~~~l~~DL-------~~l~~~~~w~~~~~~~~a~~~yv~~i~~~~~~~~p-------------------~~~lg~~Yv~ 132 (215)
T 1wzd_A 80 -AEVLARDL-------DKLNGSSEWRSRITASPAVIDYVNRLEEIRDNVDG-------------------PALVAHHYVR 132 (215)
T ss_dssp -HHHHHHHH-------HHHHSSSTHHHHCCCCHHHHHHHHHHHHHHHHTCH-------------------HHHHHHHHHH
T ss_pred -HHHHHHHH-------HHHcCCcchhhcCCCCHHHHHHHHHHHHHhccCCH-------------------HHHHHHHHHH
Confidence 00111111 1223222 224678999999999998776432 1 1222222211
Q ss_pred HHH----HHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 008479 164 MRL----YAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMK 234 (564)
Q Consensus 164 ~~~----Y~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~ 234 (564)
+-+ =..|++.+.+..+. ++ .=-.+...+..++-...-..+.+.||++ .+++++++++.+-=..+-+
T Consensus 133 YeG~~~GGq~i~~~~~~~l~l--~~-~g~~f~~~~~~~~~~~~~~~fr~~Ld~~--~~~~~~~~~ii~eA~~aF~ 202 (215)
T 1wzd_A 133 YLGDLSGGQVIARMMQRHYGV--DP-EALGFYHFEGIAKLKVYKDEYREKLNNL--ELSDEQREHLLKEATDAFV 202 (215)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC--CG-GGCGGGCCTTCSCHHHHHHHHHHHHHTC--CCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHhcCc--Cc-ccceeeecCCcCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHH
Confidence 011 02233334332221 11 1122334444334456677888999987 3678777766554444443
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0013 Score=64.36 Aligned_cols=53 Identities=19% Similarity=0.394 Sum_probs=44.1
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC-hhHH
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLR 509 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~-~~L~ 509 (564)
..+.+|...++.+++..+.+ +..+++||||.||+.|+..|++|++++.. +.++
T Consensus 183 ~~~~~K~~~~~~~~~~~~~~-~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~ 236 (261)
T 2rbk_A 183 AKGDTKQKGIDEIIRHFGIK-LEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVK 236 (261)
T ss_dssp STTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHH
T ss_pred CCCCChHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCceEEecCccHHHH
Confidence 45678999999999888764 47899999999999999999999999743 3443
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.001 Score=65.58 Aligned_cols=54 Identities=22% Similarity=0.308 Sum_probs=44.7
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcC-ChhHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRV 511 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~-~~~L~~~ 511 (564)
.+.+|...++.+++..+.+ ..++++||||.||++|+..|++|++++. .+.+++.
T Consensus 187 ~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~ 241 (268)
T 1nf2_A 187 KNVDKGKALRFLRERMNWK-KEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEA 241 (268)
T ss_dssp TTCCHHHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHH
T ss_pred CCCChHHHHHHHHHHcCCC-HHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhh
Confidence 4668999999999888764 4789999999999999999999999973 3455543
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.00097 Score=64.74 Aligned_cols=43 Identities=16% Similarity=0.244 Sum_probs=37.9
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhc--CccEEEcCC
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA--DIGIVIGSS 505 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~A--d~giv~~~~ 505 (564)
.+.+|...++.+++..+ ++++|||.||++|+..| ++||++++.
T Consensus 157 ~~~~Kg~al~~l~~~~g------via~GD~~ND~~Ml~~a~~g~~vam~Na 201 (239)
T 1u02_A 157 PGVNKGSAIRSVRGERP------AIIAGDDATDEAAFEANDDALTIKVGEG 201 (239)
T ss_dssp TTCCHHHHHHHHHTTSC------EEEEESSHHHHHHHHTTTTSEEEEESSS
T ss_pred CCCCHHHHHHHHHhhCC------eEEEeCCCccHHHHHHhhCCcEEEECCC
Confidence 46689999999997542 99999999999999999 999999855
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0009 Score=65.48 Aligned_cols=47 Identities=23% Similarity=0.368 Sum_probs=40.5
Q ss_pred CchHHHHHHHHHHhCCCCC--ccEEEEcCCccchhhhhhcCccEEEcCCh
Q 008479 459 IDKVQAFNNTLEKYGTDRK--NLSVYIGDSVGDLLCLLEADIGIVIGSSS 506 (564)
Q Consensus 459 ~~K~~~l~~l~~~~~~~~~--~~viyiGDs~~Dl~~l~~Ad~giv~~~~~ 506 (564)
.+|...++.+++..+.+ . ..+++||||.||+.|+..|++||++++..
T Consensus 175 ~~K~~~l~~l~~~~~i~-~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~ 223 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDP-EEARFAVGLGDSLNDLPLFRAVDLAVYVGRGD 223 (259)
T ss_dssp CCHHHHHHHHHHTCSSH-HHHTSEEEEESSGGGHHHHHTSSEEEECSSSC
T ss_pred CCHHHHHHHHHHHhCCC-CCCceEEEEeCCHHHHHHHHhCCCeEEeCChh
Confidence 57999999999877652 3 68999999999999999999999998543
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0011 Score=65.62 Aligned_cols=48 Identities=21% Similarity=0.221 Sum_probs=40.3
Q ss_pred CCCchHHHHHHHHHHhC-CCCCcc--EEEEcCCccchhhhhhcCccEEEcCC
Q 008479 457 SPIDKVQAFNNTLEKYG-TDRKNL--SVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~-~~~~~~--viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
.+.+|...++.+++..+ .+ ... +++||||.||++|+..|++||+++..
T Consensus 186 ~~~~K~~~l~~l~~~~~~~~-~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~ 236 (275)
T 1xvi_A 186 ASAGKDQAANWIIATYQQLS-GKRPTTLGLGDGPNDAPLLEVMDYAVIVKGL 236 (275)
T ss_dssp TTCCHHHHHHHHHHHHHHHH-SSCCEEEEEESSGGGHHHHHTSSEEEECCCC
T ss_pred CCCCHHHHHHHHHHHhhhcc-cccCcEEEECCChhhHHHHHhCCceEEecCC
Confidence 46689999999987765 43 356 99999999999999999999999744
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.008 Score=63.46 Aligned_cols=97 Identities=13% Similarity=0.128 Sum_probs=67.0
Q ss_pred CCccHHHHHHHHHHcCCCCCcEEEEcccc-------C-HHH---HHHHHhhcCCCceeEEeeceeecCccccccccccCC
Q 008479 388 LQDGCTTFFQKVVKNENLNANVHVLSYCW-------C-GDL---IRASFSSAGLNALNVHANEFSFKESISTGEIIEKVE 456 (564)
Q Consensus 388 lr~G~~efl~~l~~~g~~~~~~~IvS~g~-------s-~~~---I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~ 456 (564)
+.||..++|+.|+++| ++++|+|.+- + ..+ ++.+|+..|+....|+|.+ .. .
T Consensus 88 ~~pgv~e~L~~L~~~G---~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~fd~i~~~~-----~~---------~ 150 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEG---YKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATH-----AG---------L 150 (416)
T ss_dssp SCTTHHHHHHHHHHTT---CEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSCCEEEEECS-----SS---------T
T ss_pred hcccHHHHHHHHHHCC---CeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEEECC-----CC---------C
Confidence 7899999999999999 9999999831 0 233 7888888887533333322 11 0
Q ss_pred CCCchHHHHHHHHHHhC----CCCCccEEEEcCCc-----------------cchhhhhhcCccEEE
Q 008479 457 SPIDKVQAFNNTLEKYG----TDRKNLSVYIGDSV-----------------GDLLCLLEADIGIVI 502 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~----~~~~~~viyiGDs~-----------------~Dl~~l~~Ad~giv~ 502 (564)
.+--+...+...++..+ . ...+++||||+. +|+.+...|++.++.
T Consensus 151 ~~KP~p~~~~~a~~~l~~~~~v-~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~ 216 (416)
T 3zvl_A 151 NRKPVSGMWDHLQEQANEGIPI-SVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFAT 216 (416)
T ss_dssp TSTTSSHHHHHHHHHSSTTCCC-CGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEEC
T ss_pred CCCCCHHHHHHHHHHhCCCCCC-CHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccC
Confidence 11112356666666654 3 357899999997 799999999976443
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0084 Score=59.84 Aligned_cols=99 Identities=8% Similarity=-0.072 Sum_probs=61.0
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccC--HHHHHHHHhh--------cCCCceeEEeeceeecCcccccccccc
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--GDLIRASFSS--------AGLNALNVHANEFSFKESISTGEIIEK 454 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s--~~~I~~~l~~--------~g~~~~~I~aN~l~~~~g~~tG~~~~~ 454 (564)
...+.||..++++.++++| +++.|+|+.-. ...+..+|++ +|+....+++.. ++ ..+
T Consensus 186 ~~~~~~g~~e~L~~L~~~g---~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~------~~k 252 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMG---YQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQRE----QG------DTR 252 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTT---CEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECC----TT------CCS
T ss_pred ccCCChHHHHHHHHHHHCC---CeEEEEeCCCcccchhHHHHHHhcccccccccCCCchheeecc----CC------CCc
Confidence 4678999999999999999 99999998641 1234556666 675322222211 00 001
Q ss_pred CCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEE
Q 008479 455 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 501 (564)
Q Consensus 455 ~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 501 (564)
-+...+...+...+......+++|||+.+|+.+...|++.++
T Consensus 253 -----p~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~ 294 (301)
T 1ltq_A 253 -----KDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECW 294 (301)
T ss_dssp -----CHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEE
T ss_pred -----HHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEE
Confidence 122333333333322222346899999999999999998544
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.95 E-value=0.0021 Score=62.34 Aligned_cols=52 Identities=13% Similarity=0.154 Sum_probs=39.3
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcC----CccchhhhhhcCc-cEEEcC-ChhHHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIGS-SSSLRRVG 512 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad~-giv~~~-~~~L~~~~ 512 (564)
.+.+|...|+.+ .+.+ .+.++++|| |.||++|+..|+. |+.+++ .+.+++.|
T Consensus 185 ~~~~Kg~al~~l---~~i~-~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A 242 (246)
T 2amy_A 185 DGWDKRYCLRHV---ENDG-YKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICE 242 (246)
T ss_dssp TTCSGGGGGGGT---TTSC-CSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHH
T ss_pred CCCchHHHHHHH---hCCC-HHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHH
Confidence 456788888888 4443 578999999 9999999999988 999984 35666655
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=95.82 E-value=0.0059 Score=59.89 Aligned_cols=52 Identities=13% Similarity=0.186 Sum_probs=40.8
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcC----CccchhhhhhcCc-cEEEcCC-hhHHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIGSS-SSLRRVG 512 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad~-giv~~~~-~~L~~~~ 512 (564)
.+.+|...|+.+ .+.+ .+.++++|| |.||++|+..|+. |+.+++. +.+++.+
T Consensus 194 ~~vsKg~al~~l---~gi~-~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a 251 (262)
T 2fue_A 194 EGWDKRYCLDSL---DQDS-FDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCR 251 (262)
T ss_dssp TTCSTTHHHHHH---TTSC-CSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHH
T ss_pred CCCCHHHHHHHH---HCCC-HHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhh
Confidence 466799999998 4553 578999999 9999999999985 9999733 4555544
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=95.11 E-value=0.014 Score=54.14 Aligned_cols=94 Identities=7% Similarity=0.063 Sum_probs=61.3
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
.+.+|||+.+|++.+.++ .+++|+|++- ..+++.++...+... .+...+ +.+....+ |..+
T Consensus 53 ~v~~rPg~~efL~~l~~~----~~i~I~T~~~-~~~a~~vl~~ld~~~--~f~~~~-~rd~~~~~-----------k~~~ 113 (181)
T 2ght_A 53 YVLKRPHVDEFLQRMGEL----FECVLFTASL-AKYADPVADLLDKWG--AFRARL-FRESCVFH-----------RGNY 113 (181)
T ss_dssp EEEECTTHHHHHHHHHHH----SEEEEECSSC-HHHHHHHHHHHCTTC--CEEEEE-CGGGSEEE-----------TTEE
T ss_pred EEEeCCCHHHHHHHHHhC----CCEEEEcCCC-HHHHHHHHHHHCCCC--cEEEEE-eccCceec-----------CCcE
Confidence 468999999999999985 7999999996 899999999877532 222221 11111000 1001
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
++.+ +..+. ...++|+||||..|+.+...+++.
T Consensus 114 ~k~L-~~Lg~-~~~~~vivdDs~~~~~~~~~ngi~ 146 (181)
T 2ght_A 114 VKDL-SRLGR-DLRRVLILDNSPASYVFHPDNAVP 146 (181)
T ss_dssp ECCG-GGTCS-CGGGEEEECSCGGGGTTCTTSBCC
T ss_pred eccH-HHhCC-CcceEEEEeCCHHHhccCcCCEeE
Confidence 1111 11122 247899999999999988777754
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.02 E-value=0.0062 Score=57.44 Aligned_cols=94 Identities=10% Similarity=0.093 Sum_probs=61.5
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
.+.+|||+.+|++++.++ ++++|+|++- ..+++.++...+... .+...+ +.+....+ |..+
T Consensus 66 ~v~~RPgv~efL~~l~~~----~~i~I~Tss~-~~~a~~vl~~ld~~~--~f~~~l-~rd~~~~~-----------k~~~ 126 (195)
T 2hhl_A 66 YVLKRPHVDEFLQRMGQL----FECVLFTASL-AKYADPVADLLDRWG--VFRARL-FRESCVFH-----------RGNY 126 (195)
T ss_dssp EEEECTTHHHHHHHHHHH----SEEEEECSSC-HHHHHHHHHHHCCSS--CEEEEE-CGGGCEEE-----------TTEE
T ss_pred EEEeCcCHHHHHHHHHcC----CeEEEEcCCC-HHHHHHHHHHhCCcc--cEEEEE-Ecccceec-----------CCce
Confidence 468899999999999985 7999999996 899999999877532 222221 11111000 1001
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
++.+ +..+. ...++|+|+||..++.+...+++.
T Consensus 127 lK~L-~~Lg~-~~~~~vivDDs~~~~~~~~~ngi~ 159 (195)
T 2hhl_A 127 VKDL-SRLGR-ELSKVIIVDNSPASYIFHPENAVP 159 (195)
T ss_dssp ECCG-GGSSS-CGGGEEEEESCGGGGTTCGGGEEE
T ss_pred eeeH-hHhCC-ChhHEEEEECCHHHhhhCccCccE
Confidence 1111 11122 247899999999999988888753
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=94.61 E-value=0.011 Score=57.55 Aligned_cols=51 Identities=16% Similarity=0.061 Sum_probs=39.2
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcC----CccchhhhhhcC-ccEEEcCChhHHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEAD-IGIVIGSSSSLRRVG 512 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad-~giv~~~~~~L~~~~ 512 (564)
.|.+|...|+.+++ ..+.++++|| |.||++|+..|+ +|+.+++.....+.|
T Consensus 184 ~gv~Kg~al~~L~~-----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~ 239 (246)
T 3f9r_A 184 VGWDKTYCLQFVED-----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEV 239 (246)
T ss_dssp TTCSGGGGGGGTTT-----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHH
T ss_pred CCCCHHHHHHHHHc-----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHH
Confidence 46779988888876 2478999999 599999999886 588898554444333
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.33 E-value=0.04 Score=52.96 Aligned_cols=46 Identities=20% Similarity=0.292 Sum_probs=39.0
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCccEEEc
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIG 503 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~giv~~ 503 (564)
.+..|...++.+++..+.+ ++++++||||. ||+.|+..|+++++.-
T Consensus 188 ~~kpk~~~~~~~~~~lgi~-~~~~i~iGD~~~nDi~~a~~aG~~~~~v 234 (271)
T 2x4d_A 188 VGKPSPEFFKSALQAIGVE-AHQAVMIGDDIVGDVGGAQRCGMRALQV 234 (271)
T ss_dssp ESTTCHHHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred ccCCCHHHHHHHHHHhCCC-cceEEEECCCcHHHHHHHHHCCCcEEEE
Confidence 3557899999999888774 58999999998 9999999999976654
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=93.87 E-value=0.011 Score=56.78 Aligned_cols=44 Identities=18% Similarity=0.175 Sum_probs=35.7
Q ss_pred CCchHHHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCcc-EEE
Q 008479 458 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG-IVI 502 (564)
Q Consensus 458 g~~K~~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~g-iv~ 502 (564)
+-.|...++.+++..+.+ +.++++||||. ||+.|+..|++. |.+
T Consensus 178 ~Kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~a~~aG~~~i~v 223 (259)
T 2ho4_A 178 GKPEKTFFLEALRDADCA-PEEAVMIGDDCRDDVDGAQNIGMLGILV 223 (259)
T ss_dssp STTSHHHHHHHGGGGTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred cCCCHHHHHHHHHHcCCC-hHHEEEECCCcHHHHHHHHHCCCcEEEE
Confidence 345778888888887763 58999999998 999999999984 444
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=92.22 E-value=0.084 Score=51.20 Aligned_cols=46 Identities=20% Similarity=0.169 Sum_probs=38.0
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCC-ccchhhhhhcCccEEEc
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGIVIG 503 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~giv~~ 503 (564)
.+..|...++.+++..+.+ +.++++|||+ .||+.|+..|++++++-
T Consensus 193 ~~kpk~~~~~~~~~~lgi~-~~e~i~iGD~~~nDi~~a~~aG~~~i~v 239 (271)
T 1vjr_A 193 AGKPNPLVVDVISEKFGVP-KERMAMVGDRLYTDVKLGKNAGIVSILV 239 (271)
T ss_dssp CSTTSTHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCHHHHHHHHHHhCCC-CceEEEECCCcHHHHHHHHHcCCeEEEE
Confidence 3456888999998888774 5899999999 59999999999976553
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=92.02 E-value=0.11 Score=50.41 Aligned_cols=46 Identities=15% Similarity=0.292 Sum_probs=37.6
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCC-ccchhhhhhcCccEEEc
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGIVIG 503 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~giv~~ 503 (564)
.+-.|...++.+++..+.+ ..++++|||+ .||+.|+..|++++++.
T Consensus 181 ~~kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~~~~aG~~~~~v 227 (266)
T 3pdw_A 181 IGKPESIIMEQAMRVLGTD-VSETLMVGDNYATDIMAGINAGMDTLLV 227 (266)
T ss_dssp CSTTSSHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHHTCEEEEE
T ss_pred cCCCCHHHHHHHHHHcCCC-hhhEEEECCCcHHHHHHHHHCCCeEEEE
Confidence 3445668899998888774 5899999999 79999999999965554
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=87.12 E-value=0.55 Score=45.38 Aligned_cols=45 Identities=22% Similarity=0.404 Sum_probs=36.2
Q ss_pred CCchHHHHHHHHHHhCCCCCccEEEEcCC-ccchhhhhhcCc-cEEEc
Q 008479 458 PIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVIG 503 (564)
Q Consensus 458 g~~K~~~l~~l~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~-giv~~ 503 (564)
+-.|...++.+++..+.+ +.++++|||+ .+|+.|+..|++ .|.+.
T Consensus 181 ~Kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v~ 227 (264)
T 3epr_A 181 GKPNAIIMNKALEILNIP-RNQAVMVGDNYLTDIMAGINNDIDTLLVT 227 (264)
T ss_dssp STTSHHHHHHHHHHHTSC-GGGEEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred CCCCHHHHHHHHHHhCcC-cccEEEECCCcHHHHHHHHHCCCeEEEEC
Confidence 445667788888888763 5899999999 799999999998 45554
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=86.98 E-value=0.46 Score=47.12 Aligned_cols=44 Identities=18% Similarity=0.282 Sum_probs=35.5
Q ss_pred CCchHHHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCccEEE
Q 008479 458 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVI 502 (564)
Q Consensus 458 g~~K~~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~giv~ 502 (564)
+-.|...++.+++..+.+ +.++++|||+. ||+.|+..|++..++
T Consensus 214 ~KP~~~~~~~~~~~lgi~-~~e~l~vGD~~~~Di~~a~~aG~~~i~ 258 (306)
T 2oyc_A 214 GKPSPYMFECITENFSID-PARTLMVGDRLETDILFGHRCGMTTVL 258 (306)
T ss_dssp STTSTHHHHHHHHHSCCC-GGGEEEEESCTTTHHHHHHHHTCEEEE
T ss_pred CCCCHHHHHHHHHHcCCC-hHHEEEECCCchHHHHHHHHCCCeEEE
Confidence 344567888888887763 58999999996 999999999995444
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=86.47 E-value=0.63 Score=44.80 Aligned_cols=45 Identities=13% Similarity=0.123 Sum_probs=36.5
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCC-ccchhhhhhcCcc-EEE
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIG-IVI 502 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~g-iv~ 502 (564)
.+-.|...++.+++..+.+ +.++++|||+ .+|+.|+..|++. +.+
T Consensus 185 ~~kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~~~~~g~~~~~v 231 (268)
T 3qgm_A 185 VGKPSEVIMREALDILGLD-AKDVAVVGDQIDVDVAAGKAIGAETVLV 231 (268)
T ss_dssp CSTTSHHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHHTCEEEEE
T ss_pred cCCCCHHHHHHHHHHhCCC-chhEEEECCCchHHHHHHHHCCCcEEEE
Confidence 4556778899998888774 5899999999 6999999999973 444
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=86.25 E-value=1.6 Score=42.01 Aligned_cols=40 Identities=13% Similarity=0.120 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCc-cEEEc
Q 008479 461 KVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 503 (564)
Q Consensus 461 K~~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-giv~~ 503 (564)
+...++..++. . .+.++++|||+. +|+.+...+++ .+.+.
T Consensus 189 ~~~~~~~~~~~--~-~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~ 230 (263)
T 1zjj_A 189 NEPMYEVVREM--F-PGEELWMVGDRLDTDIAFAKKFGMKAIMVL 230 (263)
T ss_dssp SHHHHHHHHHH--S-TTCEEEEEESCTTTHHHHHHHTTCEEEEES
T ss_pred CHHHHHHHHHh--C-CcccEEEECCChHHHHHHHHHcCCeEEEEC
Confidence 45666666655 2 357999999995 99999999998 45554
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=84.55 E-value=1.2 Score=43.38 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=31.2
Q ss_pred HHHHHHHHHHh----CCCCCccEEEEcCCc-cchhhhhhcCcc-EEEc
Q 008479 462 VQAFNNTLEKY----GTDRKNLSVYIGDSV-GDLLCLLEADIG-IVIG 503 (564)
Q Consensus 462 ~~~l~~l~~~~----~~~~~~~viyiGDs~-~Dl~~l~~Ad~g-iv~~ 503 (564)
...++..++.. +. .+.++++|||+. +|+.+...+++. |.+.
T Consensus 207 p~~~~~a~~~l~~~~~~-~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~ 253 (284)
T 2hx1_A 207 SQMFMFAYDMLRQKMEI-SKREILMVGDTLHTDILGGNKFGLDTALVL 253 (284)
T ss_dssp SHHHHHHHHHHHTTSCC-CGGGEEEEESCTTTHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHHhhccCC-CcceEEEECCCcHHHHHHHHHcCCeEEEEC
Confidence 35666666666 65 357999999995 999999999984 4453
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 564 | ||||
| d2a2ma1 | 231 | a.132.1.3 (A:10-240) Hypothetical protein BT3146 { | 1e-41 | |
| d2f2ga1 | 215 | a.132.1.3 (A:5-219) Seed maturation protein-relate | 2e-35 | |
| d2gm8a1 | 211 | a.132.1.3 (A:2-212) TenA homolog PAE0170 {Archaeon | 1e-34 | |
| d1wwma1 | 180 | a.132.1.3 (A:11-190) Hypothetical protein TTHA0169 | 2e-34 | |
| d1udda_ | 215 | a.132.1.3 (A:) Hypothetical transcriptional regula | 4e-33 | |
| d1rtwa_ | 206 | a.132.1.3 (A:) Putative transcriptional activator | 4e-33 | |
| d1to9a_ | 225 | a.132.1.3 (A:) Transcriptional activator TenA {Bac | 4e-32 | |
| d1z72a1 | 217 | a.132.1.3 (A:4-220) Putative transcriptional regul | 2e-31 | |
| d1rcwa_ | 213 | a.132.1.4 (A:) Hypothetical protein CT610 {Chlamyd | 3e-12 | |
| d2bdua1 | 291 | c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III | 2e-10 | |
| d1otva_ | 254 | a.132.1.4 (A:) Coenzyme PQQ synthesis protein C, P | 6e-05 |
| >d2a2ma1 a.132.1.3 (A:10-240) Hypothetical protein BT3146 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 231 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Hypothetical protein BT3146 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 147 bits (373), Expect = 1e-41
Identities = 39/239 (16%), Positives = 83/239 (34%), Gaps = 29/239 (12%)
Query: 7 KSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQ 66
KS P + L +LW +V + + + +A+G L + + QD ++
Sbjct: 20 KSDVPAADSLFWKLWNGSLDTAVQVLQTDYFKGIAAGTLDPNAYGSLMVQDGYYCFRGRD 79
Query: 67 AYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFL 126
Y A CA D+ + K + ++++ + W A + Y ++
Sbjct: 80 DYATAATCAQDETLREFFKAKAK---SYDEYNETYHQTWHLREASGLIPGTDIKDYADYE 136
Query: 127 LATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHP 186
A + + Y M PC L+ ++ L N
Sbjct: 137 AYVAG------------------SLASPYMCVVMLPCEYLWPWIANF---LDGYTPTNSL 175
Query: 187 YTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPL 245
Y WI+ A Q ++L++ + ++ ++++ AM E++ F + +
Sbjct: 176 YRFWIEWN--GGTPNGAYQMGNMLEQYRDKIDEDKA---VEIFNTAMNYELKVFTSSTI 229
|
| >d2f2ga1 a.132.1.3 (A:5-219) Seed maturation protein-related At3g16990 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 215 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Seed maturation protein-related At3g16990 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 130 bits (327), Expect = 2e-35
Identities = 42/232 (18%), Positives = 86/232 (37%), Gaps = 28/232 (12%)
Query: 15 GLARRLWIKFKRESVFAMYS--PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAE 72
G+ WI K S++ + F V + G++ L +FR ++ QD+ F++ F
Sbjct: 1 GVIDT-WID-KHRSIYTAATRHAFVVSIRDGSVDLSSFRTWLGQDYLFVRRFVPFVASVL 58
Query: 73 ECADDDDAKLS----ISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLA 128
A D + S + + +E++ +W D + A +Y FL
Sbjct: 59 IRACKDSGESSDMEVVLGGIASLNDEIEWFKREGSKWDVDFS-TVVPQRANQEYGRFLED 117
Query: 129 TASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYT 188
S +V+ + A +Y H L + N+ T
Sbjct: 118 LMSSEVK-----------------YPVIMTAFWAIEAVYQESFA--HCLEDGNKTPVELT 158
Query: 189 KWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+ ++ F+ +++ ++ + +GE L E + + ++LEV F+
Sbjct: 159 GACHRWGNDGFKQYCSSVKNIAERCLENASGEVLGEAEDVLVRVLELEVAFW 210
|
| >d2gm8a1 a.132.1.3 (A:2-212) TenA homolog PAE0170 {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 211 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: TenA homolog PAE0170 species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Score = 127 bits (321), Expect = 1e-34
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 27/209 (12%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVL-E 93
PF L +G L +E F++Y+ QD+++L F++A LA A D + EL G +
Sbjct: 20 PFVAELYAGTLPMEKFKYYLLQDYNYLVNFAKALSLAASRAPSVDLMKTALELAYGTVTG 79
Query: 94 ELKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTK 151
E+ +++ +KE G L A N V Y +L +T + +
Sbjct: 80 EMANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTCA------------------LE 121
Query: 152 VAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLD 211
+ A+ PC YA + + L N H Y KW Y S ++ + +LD
Sbjct: 122 GFYQCMAALLPCFWSYAEIAERHGGKLRENPV-HVYKKWASVYLSPEYRGLVERLRAVLD 180
Query: 212 KLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+G + + + +A E+EF+
Sbjct: 181 S-----SGLSAEELWPYFKEASLYELEFW 204
|
| >d1wwma1 a.132.1.3 (A:11-190) Hypothetical protein TTHA0169 (TT2028) {Thermus thermophilus [TaxId: 274]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Hypothetical protein TTHA0169 (TT2028) species: Thermus thermophilus [TaxId: 274]
Score = 126 bits (317), Expect = 2e-34
Identities = 28/197 (14%), Positives = 50/197 (25%), Gaps = 35/197 (17%)
Query: 44 NLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVK 103
L E FR ++ QD+ F++A + A + L +EEL
Sbjct: 15 RLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQAHRAPLVQAL-MATVEELDWLLLQGA 73
Query: 104 EWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPC 163
+ Y L AY +
Sbjct: 74 SPSAPVHP------VRAGYIALLEEMGRLPY-------------------AYRVVFFYFL 108
Query: 164 MRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELD 223
L+ + P+ + ++ + FQA E L L L E +
Sbjct: 109 NGLFLEAWA------HHVPEEGPWAELSQHWFAPEFQAVLYDLEVLARGLWEDLDPEVV- 161
Query: 224 IIEKLYHQAMKLEVEFF 240
+ ++ E +
Sbjct: 162 --RTYLRRILEAEKATW 176
|
| >d1udda_ a.132.1.3 (A:) Hypothetical transcriptional regulator PH1161 {Pyrococcus horikoshii [TaxId: 53953]} Length = 215 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Hypothetical transcriptional regulator PH1161 species: Pyrococcus horikoshii [TaxId: 53953]
Score = 123 bits (310), Expect = 4e-33
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 25/208 (12%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEE 94
PF V L SG L LE F+ Y+ QDF++L ++A + A+ I R V E
Sbjct: 24 PFVVQLYSGTLPLEKFKFYVLQDFNYLVGLTRALAVISSKAEYPLMAELIELARDEVTVE 83
Query: 95 LKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKV 152
++ + +KE L Y +F+LATA
Sbjct: 84 VENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATAY------------------KGN 125
Query: 153 AAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDK 212
L A+ PC YA + + L N Y +W Y S + + ++D
Sbjct: 126 IIEGLTALLPCFWSYAEIAEYHKDKLRDNPI-KIYREWGKVYLSNEYLNLVGRLRKIIDS 184
Query: 213 LSVSLTGEELDIIEKLYHQAMKLEVEFF 240
D + +++ K E+ F+
Sbjct: 185 SG----HSGYDRLRRIFITGSKFELAFW 208
|
| >d1rtwa_ a.132.1.3 (A:) Putative transcriptional activator PF1337 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 206 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Putative transcriptional activator PF1337 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 123 bits (309), Expect = 4e-33
Identities = 40/206 (19%), Positives = 77/206 (37%), Gaps = 24/206 (11%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEE 94
F + +A +K E F ++ D++F+K + L A DD +E + +E
Sbjct: 21 KFLIEMAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPDDLLPF-FAESIYYISKE 79
Query: 95 LKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAA 154
L+M + +E G L Y +LL+ AS
Sbjct: 80 LEMFEKKAQELGISLNGEIDWR--AKSYVNYLLSVAS------------------LGSFL 119
Query: 155 YTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLS 214
A+ + Y K + PY ++I+++SS+ F + E +L+ L+
Sbjct: 120 EGFTALYCEEKAYYEAWKWVRE---NLKERSPYQEFINHWSSQEFGEYVKRIEKILNSLA 176
Query: 215 VSLTGEELDIIEKLYHQAMKLEVEFF 240
E + +++ + K E+ F+
Sbjct: 177 EKHGEFEKERAREVFKEVSKFELIFW 202
|
| >d1to9a_ a.132.1.3 (A:) Transcriptional activator TenA {Bacillus subtilis [TaxId: 1423]} Length = 225 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Transcriptional activator TenA species: Bacillus subtilis [TaxId: 1423]
Score = 121 bits (304), Expect = 4e-32
Identities = 42/209 (20%), Positives = 84/209 (40%), Gaps = 24/209 (11%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLE- 93
PF + G L ++ F++Y+ QD ++L F++ A D ++ +G E
Sbjct: 21 PFVQGIGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKDLYTTGRMASHAQGTYEA 80
Query: 94 ELKMHDSFVKEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTK 151
E+ +H F + + + YT + + +
Sbjct: 81 EMALHREFAELLEISEEERKAFKPSPTAYSYTSHMYRSVL------------------SG 122
Query: 152 VAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLD 211
A L A+ PC LY +G++ LL+ + G+ Y KWI Y + F+ + + D
Sbjct: 123 NFAEILAALLPCYWLYYEVGEK---LLHCDPGHPIYQKWIGTYGGDWFRQQVEEQINRFD 179
Query: 212 KLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
+L+ + T E +++ + + E +F+
Sbjct: 180 ELAENSTEEVRAKMKENFVISSYYEYQFW 208
|
| >d1z72a1 a.132.1.3 (A:4-220) Putative transcriptional regulator SP0716 (SPr0628) {Streptococcus pneumoniae [TaxId: 1313]} Length = 217 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Putative transcriptional regulator SP0716 (SPr0628) species: Streptococcus pneumoniae [TaxId: 1313]
Score = 119 bits (298), Expect = 2e-31
Identities = 39/213 (18%), Positives = 82/213 (38%), Gaps = 27/213 (12%)
Query: 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG 90
A+ F L +G ++ + + Y+ QD+HF AF AD ++KL ++
Sbjct: 25 AINHRFVKELFAGTIENKVLKDYLIQDYHFFDAFLSMLGACVAHADKLESKLRFAKQLGF 84
Query: 91 VL-EELKMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPF 147
+ +E KE T++ T + + + + +
Sbjct: 85 LEADEDGYFQKAFKELKVAENDYLEVTLHPVTKAFQDLMYSAVA---------------- 128
Query: 148 EKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNE 207
+ A+ L + LY G + A + +++WI+ + F
Sbjct: 129 --SSDYAHLLVMLVIAEGLYLDWGSK----DLALPEVYIHSEWINLHRGPFFAEWVQFLV 182
Query: 208 DLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
D L+++ + E+L +++ ++QA+ LE+ FF
Sbjct: 183 DELNRVGKNR--EDLTELQQRWNQAVALELAFF 213
|
| >d1rcwa_ a.132.1.4 (A:) Hypothetical protein CT610 {Chlamydia trachomatis [TaxId: 813]} Length = 213 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: PqqC-like domain: Hypothetical protein CT610 species: Chlamydia trachomatis [TaxId: 813]
Score = 63.8 bits (154), Expect = 3e-12
Identities = 23/212 (10%), Positives = 56/212 (26%), Gaps = 27/212 (12%)
Query: 35 PFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYEL----AEECADDDDAKLSISELRKG 90
F V + G L E + Y + +KAF + ++ ++ + G
Sbjct: 19 TFYVKWSKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDDLEARKLLLDNLMDEENG 78
Query: 91 VLEELKMHDSFVKEWGTDLAKM--ATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFE 148
+ + FV G ++ + A +
Sbjct: 79 YPNHIDLWKQFVFALGVTPEELEAHEPSEAAKAKVATFMRWC------------------ 120
Query: 149 KTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNED 208
A + A+ + +E L ++ D + + +++
Sbjct: 121 TGDSLAAGVAALYSYESQIPRIAREKIRGLTE---YFGFSNPEDYAYFTEHEEADVRHAR 177
Query: 209 LLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240
L L ++ D + + + + F
Sbjct: 178 EEKALIEMLLKDDADKVLEASQEVTQSLYGFL 209
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Score = 59.6 bits (144), Expect = 2e-10
Identities = 43/235 (18%), Positives = 84/235 (35%), Gaps = 39/235 (16%)
Query: 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQ 321
+L I +DFD+T + + N + + N L++ +
Sbjct: 36 AKLQIITDFDMTLS-----------------RFSYN---GKRCPTCHNIIDNCK-LVTDE 74
Query: 322 YTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKK 381
+ Q E + E E E+ + + ++ + +GI +K+
Sbjct: 75 CRRKLLQLKEQYYAIEVDPVLTVE------EKFPYMVE-WYTKSHGLLIEQGIPKAKLKE 127
Query: 382 --AGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVH--A 437
A + L++G FF K+ ++ V + S GD++ AG+ NV +
Sbjct: 128 IVADSDVMLKEGYENFFGKLQQH---GIPVFIFSAGI-GDVLEEVIRQAGVYHSNVKVVS 183
Query: 438 NEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY--GTDRKNLSVYIGDSVGDL 490
N F E+ ++ +K + + D N+ + +GDS GDL
Sbjct: 184 NFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNI-ILLGDSQGDL 237
|
| >d1otva_ a.132.1.4 (A:) Coenzyme PQQ synthesis protein C, PqqC {Klebsiella pneumoniae [TaxId: 573]} Length = 254 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: PqqC-like domain: Coenzyme PQQ synthesis protein C, PqqC species: Klebsiella pneumoniae [TaxId: 573]
Score = 42.7 bits (100), Expect = 6e-05
Identities = 19/180 (10%), Positives = 51/180 (28%), Gaps = 18/180 (10%)
Query: 30 FAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK 89
+ ++ P+ + + +G+ + + ++A F++ D + + +
Sbjct: 22 YHIHHPYHIAMHNGDATRKQIQGWVANRFYYQTTIPLKDAAIMANCPDAQTRR---KWVQ 78
Query: 90 GVLEELKMHDSFVK-EWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFE 148
+L+ H E L + ++ + +L V+ +
Sbjct: 79 RILDHDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGVRFAVDA----------YL 128
Query: 149 KTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNED 208
A A F + + L + + WI F++ Q
Sbjct: 129 NFARRACWQEAAC-SSLTELFAPQIHQSRL---DSWPQHYPWIKEEGYFYFRSRLSQANR 184
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 564 | |||
| d2a2ma1 | 231 | Hypothetical protein BT3146 {Bacteroides thetaiota | 100.0 | |
| d1to9a_ | 225 | Transcriptional activator TenA {Bacillus subtilis | 100.0 | |
| d1rtwa_ | 206 | Putative transcriptional activator PF1337 {Archaeo | 100.0 | |
| d1udda_ | 215 | Hypothetical transcriptional regulator PH1161 {Pyr | 100.0 | |
| d2f2ga1 | 215 | Seed maturation protein-related At3g16990 {Thale c | 100.0 | |
| d2gm8a1 | 211 | TenA homolog PAE0170 {Archaeon Pyrobaculum aerophi | 100.0 | |
| d1z72a1 | 217 | Putative transcriptional regulator SP0716 (SPr0628 | 100.0 | |
| d1wwma1 | 180 | Hypothetical protein TTHA0169 (TT2028) {Thermus th | 100.0 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 99.95 | |
| d1rcwa_ | 213 | Hypothetical protein CT610 {Chlamydia trachomatis | 99.91 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.89 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.87 | |
| d1otva_ | 254 | Coenzyme PQQ synthesis protein C, PqqC {Klebsiella | 99.77 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.7 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.4 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 98.92 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 98.9 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 98.89 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 98.88 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 98.88 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 98.87 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 98.72 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 98.7 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 98.66 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.58 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 98.57 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 98.54 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 98.53 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 98.47 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 98.46 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.44 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 98.43 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 98.41 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 98.37 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 98.37 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 98.3 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 98.27 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.18 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.14 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.13 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.94 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.93 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 97.79 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 97.76 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 97.72 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 97.65 | |
| d1n45a_ | 214 | Heme oxygenase-1 (HO-1) {Human (Homo sapiens) [Tax | 97.61 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.61 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 97.59 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 97.57 | |
| d1wzda1 | 207 | Heme oxygenase HmuO {Corynebacterium diphtheriae [ | 97.52 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 97.47 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 97.46 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 97.44 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 97.35 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.16 | |
| d1wova1 | 249 | Heme oxygenase 2 {Synechocystis sp. pcc 6803 [TaxI | 97.12 | |
| d1we1a_ | 222 | Heme oxygenase-1 (HO-1) {Synechocystis sp. [TaxId: | 97.11 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 96.83 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 96.31 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 96.28 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.56 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.4 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 90.24 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 84.9 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 82.2 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 81.7 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 80.38 |
| >d2a2ma1 a.132.1.3 (A:10-240) Hypothetical protein BT3146 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Hypothetical protein BT3146 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=100.00 E-value=1.2e-43 Score=347.36 Aligned_cols=208 Identities=18% Similarity=0.290 Sum_probs=187.6
Q ss_pred CCCCCCCcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 008479 6 PKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSIS 85 (564)
Q Consensus 6 ~~~~~~~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~ 85 (564)
..+..+++.+|+.+||++..+.|.++++||||++|++||||.++|++||+||++||.+|+|+++++++++++.+.+.++.
T Consensus 19 ~~~~~~~~~~~~~~L~~~~~~i~~~~~~h~Fv~~l~~GtL~~e~F~~YL~QDy~YL~~~~r~~a~~~aka~~~~~~~~~~ 98 (231)
T d2a2ma1 19 LKSDVPAADSLFWKLWNGSLDTAVQVLQTDYFKGIAAGTLDPNAYGSLMVQDGYYCFRGRDDYATAATCAQDETLREFFK 98 (231)
T ss_dssp CCCSCCCTTSHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHH
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 35677889999999999999999999999999999999999999999999999999999999999999999988777665
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHH
Q 008479 86 ELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCM 164 (564)
Q Consensus 86 ~~~~~i~~E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~ 164 (564)
.. +..|+++|+.+++.+|++..+..+++|+|++|++||++++. |+. +++++||+||+
T Consensus 99 ~~---~~~e~~l~~~~~~~~gi~~~~~~~~~p~t~aY~~~l~~~a~~~~~-------------------~~~laallpC~ 156 (231)
T d2a2ma1 99 AK---AKSYDEYNETYHQTWHLREASGLIPGTDIKDYADYEAYVAGSLAS-------------------PYMCVVMLPCE 156 (231)
T ss_dssp HH---HHHHHHHHHHHHHTSCBCCGGGBCCCHHHHHHHHHHHHHHHHSCT-------------------HHHHHHHHHHH
T ss_pred HH---HHHHHHHHHHHHHHcCCChhhcCCCChHHHHHHHHHHHHHhcCCH-------------------HHHHHHHHHHH
Confidence 54 34588999999999999887778899999999999999996 553 68999999999
Q ss_pred HHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 165 RLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 165 ~~Y~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
|+|.+||+++.... .++++|++||++| ++|.+.|.+++++||+++...+ .++++++|.++|++|++||++|
T Consensus 157 w~Y~~ig~~l~~~~---~~~~~y~~WI~~y--~~f~~~v~~~~~~ld~~~~~~~---~e~~~~iF~~~~~lE~~Fwd~A 227 (231)
T d2a2ma1 157 YLWPWIANFLDGYT---PTNSLYRFWIEWN--GGTPNGAYQMGNMLEQYRDKID---EDKAVEIFNTAMNYELKVFTSS 227 (231)
T ss_dssp HHHHHHHHHHGGGS---CTTSTTHHHHHHH--CSCCHHHHHHHHHHHTTGGGSC---HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcC---CCCCchHHHHHhC--hhHHHHHHHHHHHHHHHhcccC---HHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999997642 4789999999999 4599999999999999986554 4578999999999999999999
|
| >d1to9a_ a.132.1.3 (A:) Transcriptional activator TenA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Transcriptional activator TenA species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=5.1e-43 Score=341.98 Aligned_cols=214 Identities=19% Similarity=0.277 Sum_probs=196.8
Q ss_pred HHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHH
Q 008479 16 LARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG-VLEE 94 (564)
Q Consensus 16 ~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~-i~~E 94 (564)
|+++||+++.+.|..+++||||++|++||||.+.|++||+||++||.+|+|+++.+++++++++++..+...+.. +.+|
T Consensus 2 Fs~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~yl~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~~~~~~~e 81 (225)
T d1to9a_ 2 FSEECRSAAAEWWEGSFVHPFVQGIGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKDLYTTGRMASHAQGTYEAE 81 (225)
T ss_dssp HHHHHHHHTHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhHHHHHHHHCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999999999998888777665 4579
Q ss_pred HHHHHHHHHHhCCCcc--cccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 008479 95 LKMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGK 172 (564)
Q Consensus 95 ~~~h~~~~~~~gi~~~--~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~i~~ 172 (564)
+++|+++++.+|++.+ ...+++|+|++|++||++++..+. ++++++||+||+|+|.++|+
T Consensus 82 ~~~~~~~~~~~gi~~~~~~~~~~~p~~~~y~~~l~~~a~~~~------------------~~~~l~Al~~ce~~Y~~~~~ 143 (225)
T d1to9a_ 82 MALHREFAELLEISEEERKAFKPSPTAYSYTSHMYRSVLSGN------------------FAEILAALLPCYWLYYEVGE 143 (225)
T ss_dssp HHHHHHHHHHTTCCHHHHHTCCCCHHHHHHHHHHHHHHTTCC------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhhcCcccccchHHHHHHHHHhcCC------------------HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986 367899999999999999996433 46899999999999999999
Q ss_pred HHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcccc
Q 008479 173 EFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQPTVVP 252 (564)
Q Consensus 173 ~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a~~~~~~~~p 252 (564)
++.... ..+++|++||++|++++|.+.+.++++++|++++.+++++++++.++|+++|++|++|||+| +++.+ ||
T Consensus 144 ~~~~~~---~~~~~y~~wi~~~~~~~f~~~~~~~~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fwd~a-y~~~~-w~ 218 (225)
T d1to9a_ 144 KLLHCD---PGHPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKENFVISSYYEYQFWGMA-YRKEG-WS 218 (225)
T ss_dssp HTTTCC---CSSHHHHHHHHHHHSTTTTTHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCC-SS
T ss_pred HHHhcc---cCCchHHHHHHcccCchhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCC-CC
Confidence 887632 46789999999999999999999999999999999999999999999999999999999999 88876 44
|
| >d1rtwa_ a.132.1.3 (A:) Putative transcriptional activator PF1337 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Putative transcriptional activator PF1337 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=3.9e-42 Score=331.08 Aligned_cols=203 Identities=21% Similarity=0.258 Sum_probs=188.0
Q ss_pred HHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 008479 16 LARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEEL 95 (564)
Q Consensus 16 ~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i~~E~ 95 (564)
|+++||+...+.|..+++||||++|++||||+++|++||+||++||.+|+|+++.+++++|+.+ ..++......+.+|+
T Consensus 2 Fs~~L~~~~~~~w~~~~~HpFv~~l~~GtL~~e~f~~yl~QDy~yl~~~~r~~a~~~~~~~~~~-~~~~~~~~~~~~~E~ 80 (206)
T d1rtwa_ 2 FSEELIKENENIWRRFLPHKFLIEMAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPDDL-LPFFAESIYYISKEL 80 (206)
T ss_dssp HHHHHHHHSHHHHGGGTTCHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGG-HHHHHHHHHHHHHHH
T ss_pred cHHHHHHhHHHHHHHHHCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999999999999864 456667777788899
Q ss_pred HHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 008479 96 KMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEF 174 (564)
Q Consensus 96 ~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~i~~~~ 174 (564)
++|.++++.+|++.. ..++|+|++|++||++++. |+ ++++++||+||+|+|.++|+.+
T Consensus 81 ~~~~~~~~~~g~~~~--~~~~p~~~~y~~~l~~~a~~~~-------------------~~~~~~al~~~e~~Y~~~~~~~ 139 (206)
T d1rtwa_ 81 EMFEKKAQELGISLN--GEIDWRAKSYVNYLLSVASLGS-------------------FLEGFTALYCEEKAYYEAWKWV 139 (206)
T ss_dssp HHHHHHHHHTTCCSS--SCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCccc--cccchhHHHHHHHHHHHHhcCC-------------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999975 4689999999999999996 44 3689999999999999999998
Q ss_pred HhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 175 HALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 175 ~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
.+.. .++++|++||+.|++++|.+.|.++++++|++++.++++++++++++|+++|++|++|||+|
T Consensus 140 ~~~~---~~~~~y~~wi~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~F~~~~~lE~~Fwd~a 205 (206)
T d1rtwa_ 140 RENL---KERSPYQEFINHWSSQEFGEYVKRIEKILNSLAEKHGEFEKERAREVFKEVSKFELIFWDIA 205 (206)
T ss_dssp HHHC---SSCCTTHHHHHHHHSHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcc---ccCCcHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7753 36789999999999999999999999999999999999999999999999999999999998
|
| >d1udda_ a.132.1.3 (A:) Hypothetical transcriptional regulator PH1161 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Hypothetical transcriptional regulator PH1161 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=4.5e-42 Score=332.84 Aligned_cols=207 Identities=23% Similarity=0.319 Sum_probs=189.4
Q ss_pred cchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 008479 13 EEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVL 92 (564)
Q Consensus 13 ~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i~ 92 (564)
.+.|+++||++.++.|..+++||||++|++||||.+.|++||+||++||.+|+|+++.+++++++.+.+.++...+..+.
T Consensus 2 ~~~fs~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~e~f~~yl~QD~~yl~~~~r~~a~~~~ka~~~~~~~~~~~~~~~~~ 81 (215)
T d1udda_ 2 RVMITDKLRRDSEQIWKKIFEHPFVVQLYSGTLPLEKFKFYVLQDFNYLVGLTRALAVISSKAEYPLMAELIELARDEVT 81 (215)
T ss_dssp CCCHHHHHHHTTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999998888887887888
Q ss_pred HHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHH
Q 008479 93 EELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (564)
Q Consensus 93 ~E~~~h~~~~~~~gi~~~~--~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (564)
.|+++|.++++.+|++.++ ..+|+|+|.+|++||++++. |+ ++++++||+||+|+|.+
T Consensus 82 ~e~~~~~~~~~~~gi~~~~~~~~~~~~~~~~y~~~l~~~a~~~~-------------------~~~~l~al~~c~~~Y~~ 142 (215)
T d1udda_ 82 VEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATAYKGN-------------------IIEGLTALLPCFWSYAE 142 (215)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHhcccCcchhhHHHHHHHHHHHhCCC-------------------HHHHHHHHHHHHHHHHH
Confidence 8999999999999999863 67899999999999999985 54 35889999999999999
Q ss_pred HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 170 LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 170 i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
||+.+..... ..++++|++||+.|++++|.+.|..+.+++|++ +++++++++++|.++|++|++|||+|
T Consensus 143 ~~~~~~~~~~-~~~~~~y~~Wi~~y~~~~f~~~v~~l~~~~d~~----~~~~~~~~~~iF~~~~~lE~~Fwd~a 211 (215)
T d1udda_ 143 IAEYHKDKLR-DNPIKIYREWGKVYLSNEYLNLVGRLRKIIDSS----GHSGYDRLRRIFITGSKFELAFWEMA 211 (215)
T ss_dssp HHHHTHHHHT-TCSCHHHHHHHHGGGSHHHHHHHHHHHHHHHTS----CSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcc-cCCCcchHHHHHHcCCHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999877553 346789999999999999999999999999975 45678899999999999999999998
|
| >d2f2ga1 a.132.1.3 (A:5-219) Seed maturation protein-related At3g16990 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Seed maturation protein-related At3g16990 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=5.9e-42 Score=332.09 Aligned_cols=209 Identities=18% Similarity=0.218 Sum_probs=186.7
Q ss_pred hHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH----HHH
Q 008479 15 GLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISEL----RKG 90 (564)
Q Consensus 15 ~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~----~~~ 90 (564)
|++++|+++..+.|..+++||||++|++||||.++|++||+||++||.+|+|++++++++++|++++..+... ...
T Consensus 1 g~~d~l~~~~~~~w~~~~~HPFv~~l~~GtL~~e~f~~Yl~QDy~yl~~~~r~~a~~~~ka~~~~~~~~~~~~l~~~~~~ 80 (215)
T d2f2ga1 1 GVIDTWIDKHRSIYTAATRHAFVVSIRDGSVDLSSFRTWLGQDYLFVRRFVPFVASVLIRACKDSGESSDMEVVLGGIAS 80 (215)
T ss_dssp CHHHHHHHHTHHHHHHHTSCSCCCEEETTEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999999887654443333 334
Q ss_pred HHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHH
Q 008479 91 VLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (564)
Q Consensus 91 i~~E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (564)
..+|+.+|.++++.+|++.. ..++.|+|++|++||+.++. ++. ++++++||+||+|+|.+
T Consensus 81 ~~~e~~~~~~~~~~~~~~~~-~~~~~p~~~~y~~~l~~~~~~~~~------------------~~~~l~al~pc~~~Y~~ 141 (215)
T d2f2ga1 81 LNDEIEWFKREGSKWDVDFS-TVVPQRANQEYGRFLEDLMSSEVK------------------YPVIMTAFWAIEAVYQE 141 (215)
T ss_dssp HHHHHHHHHHHHHHTTCCGG-GCCCCHHHHHHHHHHHHTTSTTSC------------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCccHH-hcccchHHHHHHHHHHHHHhccCC------------------HHHHHHHHHHHHHHHHH
Confidence 45689999999999999875 46889999999999999874 332 46899999999999999
Q ss_pred HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008479 170 LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQP 244 (564)
Q Consensus 170 i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a~ 244 (564)
+|+.+.+... +.+++|++||++|++++|.+.|.++++++|++++..+++++++|+++|+++|++|++|||||+
T Consensus 142 ~~~~~~~~~~--~~~~~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fwd~Ay 214 (215)
T d2f2ga1 142 SFAHCLEDGN--KTPVELTGACHRWGNDGFKQYCSSVKNIAERCLENASGEVLGEAEDVLVRVLELEVAFWEMSR 214 (215)
T ss_dssp HTTTHHHHHH--TSSSCCCHHHHHHSSHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhccC--cCcchHHHHHHHhCCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9998876433 357899999999999999999999999999999999999999999999999999999999993
|
| >d2gm8a1 a.132.1.3 (A:2-212) TenA homolog PAE0170 {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: TenA homolog PAE0170 species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=100.00 E-value=7.7e-41 Score=323.07 Aligned_cols=203 Identities=26% Similarity=0.381 Sum_probs=184.6
Q ss_pred HHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHH
Q 008479 16 LARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKG-VLEE 94 (564)
Q Consensus 16 ~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~-i~~E 94 (564)
+|..||++..+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++++++.+++..+...+.. +.+|
T Consensus 1 ~t~~L~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~yl~QD~~yl~~~~r~la~~~~~~~~~~~~~~~~~~~~~~~~~E 80 (211)
T d2gm8a1 1 VTGELRRRADGIWQRILAHPFVAELYAGTLPMEKFKYYLLQDYNYLVNFAKALSLAASRAPSVDLMKTALELAYGTVTGE 80 (211)
T ss_dssp HHHHHHHHTHHHHHHHHTCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTH
T ss_pred ChHHHHHhhHHHHHHHHCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence 588999999999999999999999999999999999999999999999999999999999999999888877665 4569
Q ss_pred HHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHH
Q 008479 95 LKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLG 171 (564)
Q Consensus 95 ~~~h~~~~~~~gi~~~~--~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~i~ 171 (564)
+++|+.+++.+|++.++ ..+|+|+|.+|++||++++. ++ ++++++||+||+|+|.++|
T Consensus 81 ~~~~~~~~~~~gi~~~~~~~~~~~~~~~~y~~~l~~~a~~~~-------------------~~~~l~al~~c~~~Y~~~~ 141 (211)
T d2gm8a1 81 MANYEALLKEVGLSLRDAAEAEPNRVNVSYMAYLKSTCALEG-------------------FYQCMAALLPCFWSYAEIA 141 (211)
T ss_dssp HHHHHHHHHHTTCCHHHHHHSCCCHHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCHHHHhhcCCchhhhhHHHHHHHHHhcCC-------------------HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999763 67899999999999999985 44 3689999999999999999
Q ss_pred HHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 172 KEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 172 ~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
+++.+... ..++++|++||+.|++++|.+.|.++++++|+. ++++++|.++|+++|++|++|||+|
T Consensus 142 ~~~~~~~~-~~~~~~y~~wi~~~~~~~f~~~v~~l~~~ld~~-----~~~~~~~~~~f~~~~~lE~~Fwd~a 207 (211)
T d2gm8a1 142 ERHGGKLR-ENPVHVYKKWASVYLSPEYRGLVERLRAVLDSS-----GLSAEELWPYFKEASLYELEFWQAA 207 (211)
T ss_dssp HHHGGGGG-GCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcc-ccCCCcHHHHHHHhCCHHHHHHHHHHHHHHhcC-----hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99876543 346789999999999999999999999999984 3466889999999999999999998
|
| >d1z72a1 a.132.1.3 (A:4-220) Putative transcriptional regulator SP0716 (SPr0628) {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Putative transcriptional regulator SP0716 (SPr0628) species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=2.4e-40 Score=321.02 Aligned_cols=207 Identities=19% Similarity=0.216 Sum_probs=189.0
Q ss_pred CcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 008479 12 EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV 91 (564)
Q Consensus 12 ~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i 91 (564)
.++.++..||.+.++.|..+++||||++|++||||.+.|++||+||++||.+|+|+++.+++++++.+++..+...+..+
T Consensus 6 ~~~~~~~~l~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~yl~Qdy~yl~~~~r~la~~~~ka~~~~~~~~~~~~~~~~ 85 (217)
T d1z72a1 6 QPGLTVGELLKSSQKDWQAAINHRFVKELFAGTIENKVLKDYLIQDYHFFDAFLSMLGACVAHADKLESKLRFAKQLGFL 85 (217)
T ss_dssp CCHHHHHHHHHTTHHHHHHHHTCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHhCHHHHHHHHCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999988888887765
Q ss_pred -HHHHHHHHHHHHHhCCCcc--cccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHH
Q 008479 92 -LEELKMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY 167 (564)
Q Consensus 92 -~~E~~~h~~~~~~~gi~~~--~~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y 167 (564)
.+|+++|+++++.+|++.+ ...+|+|+|++|++||++++. ++ ++++++||+||+|+|
T Consensus 86 ~~~e~~~~~~~~~~~gi~~~~~~~~~~~p~t~~y~~~l~~~a~~~~-------------------~~~~l~al~~~~~~Y 146 (217)
T d1z72a1 86 EADEDGYFQKAFKELKVAENDYLEVTLHPVTKAFQDLMYSAVASSD-------------------YAHLLVMLVIAEGLY 146 (217)
T ss_dssp HHHHHHHHHHHHHHTTCCTHHHHSCCCCHHHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCChhhccccCCChHhhHHHHHHHHHHhcCC-------------------HHHHHHHHHHHHHHH
Confidence 4699999999999999976 367899999999999999995 54 368999999999999
Q ss_pred HHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 168 AFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 168 ~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
.++|+++.. .+.+++|++||+.|++++|.+.|.+++++||+++. +++++++|.++|+++|++|++|||++
T Consensus 147 ~~~~~~~~~----~~~~~~y~~wi~~~~~~~f~~~v~~l~~~ld~~~~--~~~~~~~~~~~f~~~~~lE~~Fwd~a 216 (217)
T d1z72a1 147 LDWGSKDLA----LPEVYIHSEWINLHRGPFFAEWVQFLVDELNRVGK--NREDLTELQQRWNQAVALELAFFDIG 216 (217)
T ss_dssp HHHHTCSSC----CCSSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHhc----CCCCchHHHHHHHcCCHHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999987654 23578999999999999999999999999999984 56789999999999999999999998
|
| >d1wwma1 a.132.1.3 (A:11-190) Hypothetical protein TTHA0169 (TT2028) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: TENA/THI-4 domain: Hypothetical protein TTHA0169 (TT2028) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.6e-36 Score=285.20 Aligned_cols=170 Identities=18% Similarity=0.137 Sum_probs=149.3
Q ss_pred hcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Q 008479 32 MYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAK 111 (564)
Q Consensus 32 ~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i~~E~~~h~~~~~~~gi~~~~ 111 (564)
..||| +||+++|++||+||++||.+|+|+++++++++|+ +++..+...+..+.+|+.+|+.++.++|
T Consensus 10 ~~~pf-------~L~~e~F~~YL~QD~~yl~~~~r~~a~~~~ka~~-~~~~~~~~~~~~~~~E~~~~~~~~~~~~----- 76 (180)
T d1wwma1 10 KALPL-------RLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQ-AHRAPLVQALMATVEELDWLLLQGASPS----- 76 (180)
T ss_dssp HHCCC-------CCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHTTTCCSS-----
T ss_pred HhCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence 46888 8999999999999999999999999999999997 4555666666778889999987766665
Q ss_pred ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccccccc
Q 008479 112 MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWI 191 (564)
Q Consensus 112 ~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~i~~~~~~~~~~~~~~~~y~~Wi 191 (564)
++++|+|++|++||++++.++ ++++++||+||+|+|.++|+++.+ .+|+|++||
T Consensus 77 -~~~~p~~~~Y~~~l~~~a~~~-------------------~~~~l~al~pc~~~Y~~~~~~~~~------~~~~y~eWI 130 (180)
T d1wwma1 77 -APVHPVRAGYIALLEEMGRLP-------------------YAYRVVFFYFLNGLFLEAWAHHVP------EEGPWAELS 130 (180)
T ss_dssp -SCCCHHHHHHHHHHHHHHHSC-------------------HHHHHHHHHHHHHHHHHHHHHHSC------SSSHHHHHH
T ss_pred -CCCChHHHHHHHHHHHHhccC-------------------hHHHHHHHHHHHHHHHHHHHHhcc------cCchHHHHH
Confidence 467899999999999988654 368999999999999999988753 568999999
Q ss_pred cccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 192 DNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 192 ~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
++|+||+|.+.|.++++++|+.+...++++ +.++|.++|++|++||+|+
T Consensus 131 ~~y~~~~F~~~v~~l~~~vd~~~~~~~~~~---~~~~F~~~~~lE~~FW~m~ 179 (180)
T d1wwma1 131 QHWFAPEFQAVLYDLEVLARGLWEDLDPEV---VRTYLRRILEAEKATWSLL 179 (180)
T ss_dssp HHHSCTTHHHHHHHHHHHHHHHHTTSCHHH---HHHHHHHHHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHHHHHHHHHhhcCCHHH---HHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999998877765 5578999999999999997
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.95 E-value=6.3e-29 Score=249.30 Aligned_cols=228 Identities=18% Similarity=0.257 Sum_probs=175.0
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCcccc
Q 008479 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (564)
Q Consensus 261 ~~~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~ 340 (564)
+++++||+|||+|||+.|+.+.++. ++|.+......+++.|++...++..+|.|.+.++
T Consensus 35 ~~klqVisDFD~Tit~~~~~~~~~~---------------------s~~~i~~~~~~~~e~~~~~~~~l~~~y~p~E~d~ 93 (291)
T d2bdua1 35 AAKLQIITDFDMTLSRFSYNGKRCP---------------------TCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDP 93 (291)
T ss_dssp GGGEEEEECCTTTTBCSEETTEECC---------------------CHHHHHHTSTTSCHHHHHHHHHHHHHHHHHHTCS
T ss_pred hhhEEEEecCCCcccccccCCcccc---------------------hhHHHHhhCCCCCHHHHHHHHHHHhhhcccccCC
Confidence 5899999999999999986532110 1122222333456677888888999999999998
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHhh--cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCH
Q 008479 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG 418 (564)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~ 418 (564)
.++.+++.++ |.|||.++++...+ .|++++++.+.+. ++.||||+.+|++.|+++| +|++|||+|| .
T Consensus 94 ~~s~~ek~~~---m~ew~~~~~~ll~~----~~l~~~~i~~~v~~~~i~Lr~G~~e~~~~l~~~~---i~~~IvSgG~-~ 162 (291)
T d2bdua1 94 VLTVEEKFPY---MVEWYTKSHGLLIE----QGIPKAKLKEIVADSDVMLKEGYENFFGKLQQHG---IPVFIFSAGI-G 162 (291)
T ss_dssp SSCHHHHHHH---HHHHHHHHHHHHHH----HCCBGGGHHHHHHHSCCCBCBTHHHHHHHHHHHT---CCEEEEEEEE-H
T ss_pred CCCHHHHHHH---HHHHHHHHHHHHHH----cCCCHHHHHHHHHhcCCCcccCHHHHHHHHHHcC---CeEEEEcCCh-H
Confidence 8999998876 56999999999976 4679999999876 5899999999999999999 9999999999 9
Q ss_pred HHHHHHHhhcCC--CceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhC-CCCCccEEEEcCCccchhhhhh
Q 008479 419 DLIRASFSSAGL--NALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYG-TDRKNLSVYIGDSVGDLLCLLE 495 (564)
Q Consensus 419 ~~I~~~l~~~g~--~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~-~~~~~~viyiGDs~~Dl~~l~~ 495 (564)
++|+++++++|+ ++++|+||++.|+++..+|.+.+++.+..+|...+.+...... ...+.++|++|||.||+.|+..
T Consensus 163 ~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g 242 (291)
T d2bdua1 163 DVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADG 242 (291)
T ss_dssp HHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTT
T ss_pred HHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhC
Confidence 999999999886 4568999999999877788888777777778755543322111 1135789999999999999975
Q ss_pred c---Cc--cEEEc-CC--hhHHHHHHhhCCcee
Q 008479 496 A---DI--GIVIG-SS--SSLRRVGSQFGVTFI 520 (564)
Q Consensus 496 A---d~--giv~~-~~--~~L~~~~~~~gi~~~ 520 (564)
+ +. +|.|- ++ ..|..|++.+.|-++
T Consensus 243 ~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~ 275 (291)
T d2bdua1 243 VANVEHILKIGYLNDRVDELLEKYMDSYDIVLV 275 (291)
T ss_dssp CSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEE
T ss_pred CccccceeeeehhHhhHHHHHHHHHhcCCEEEe
Confidence 3 22 23332 22 467888877776554
|
| >d1rcwa_ a.132.1.4 (A:) Hypothetical protein CT610 {Chlamydia trachomatis [TaxId: 813]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: PqqC-like domain: Hypothetical protein CT610 species: Chlamydia trachomatis [TaxId: 813]
Probab=99.91 E-value=7.5e-24 Score=202.38 Aligned_cols=201 Identities=13% Similarity=0.133 Sum_probs=152.4
Q ss_pred HHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH---
Q 008479 16 LARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVL--- 92 (564)
Q Consensus 16 ~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i~--- 92 (564)
|.++|.+... .....+|||+++|++|+||.+.|++|++|||+|+..|.|+++.+++++++++.+..+...+....
T Consensus 2 f~~~l~~~~~--~~~~~~HPf~~~l~~G~l~~e~~~~~~~Q~y~~v~~f~r~la~~~~~~~~~~~~~~l~~~l~~e~~~~ 79 (213)
T d1rcwa_ 2 FLDQLDLIIQ--NKHMLEHTFYVKWSKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDDLEARKLLLDNLMDEENGY 79 (213)
T ss_dssp HHHHHHHHHH--HTCGGGSHHHHHHHTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHh--hCccccCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhccc
Confidence 4556655432 23457899999999999999999999999999999999999999999999998888776654322
Q ss_pred -HHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHH
Q 008479 93 -EELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (564)
Q Consensus 93 -~E~~~h~~~~~~~gi~~~~--~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (564)
.+..++..+++.+|++.++ ..++.|+|.+|++||+.++..+. +..++++++||+|.|..
T Consensus 80 ~~h~~l~~~~~~~~g~~~~~~~~~~~~p~t~a~~~~~~~~~~~~~------------------~~~~~a~~~~~e~~~~~ 141 (213)
T d1rcwa_ 80 PNHIDLWKQFVFALGVTPEELEAHEPSEAAKAKVATFMRWCTGDS------------------LAAGVAALYSYESQIPR 141 (213)
T ss_dssp SCHHHHHHHHHHHTTCCHHHHHHCCCCHHHHHHHHHHHHHHTSSC------------------HHHHHHHHHHHHTTHHH
T ss_pred cchHHHHHHHHHHcCCCHHHHhhhhhhhHHHHHHHHHHHHHcccc------------------HHHHHHHHHHHHHHHHH
Confidence 2578999999999999863 67899999999999999996433 35789999999999999
Q ss_pred HHHHHHhhccCCCCcccccccccccCChhHHH----HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 170 LGKEFHALLNANEGNHPYTKWIDNYSSESFQA----SALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 170 i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~----~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
+++.+.+.... ..+.+...++..| ..+.+ ....+.++++. .++++++++.++|.+++++|+.|||..
T Consensus 142 ~~~~~~~~~~~-~~~~~~~~~~~~~--~~h~~~D~~H~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~f~D~~ 212 (213)
T d1rcwa_ 142 IAREKIRGLTE-YFGFSNPEDYAYF--TEHEEADVRHAREEKALIEM----LLKDDADKVLEASQEVTQSLYGFLDSF 212 (213)
T ss_dssp HHHHHHHHHHH-HSCCCSGGGGHHH--HHHHHHHHHHHHHHHHHHHH----HCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH-hCCCCcHHHhHHH--HHHHHHHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99887653210 0111122233322 22222 33444455554 456678999999999999999999975
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=2.6e-23 Score=200.30 Aligned_cols=197 Identities=17% Similarity=0.134 Sum_probs=143.9
Q ss_pred CeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCccccCC
Q 008479 263 RLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENF 342 (564)
Q Consensus 263 ~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~~ 342 (564)
...|+|||||||++.|++..|++... ..+++..++..++.+
T Consensus 10 ~~aV~FD~DGTLi~~e~~~~l~~~~g----------------------~~~~~~~~~~~~~~g----------------- 50 (217)
T d1nnla_ 10 ADAVCFDVDSTVIREEGIDELAKICG----------------------VEDAVSEMTRRAMGG----------------- 50 (217)
T ss_dssp CSEEEEETBTTTBSSCHHHHHHHHTT----------------------CTTTC---------------------------
T ss_pred CCEEEEcCccccCCccHHHHHHHHcC----------------------ChHHHHHHHHHHHcC-----------------
Confidence 44688999999999999888876441 223333344433322
Q ss_pred CHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHHhh-cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHH
Q 008479 343 NYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE-RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLI 421 (564)
Q Consensus 343 ~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~-~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I 421 (564)
+++|.+.+. .++ .+++|...+.++...+ .+.++||+.+++++|+++| ++++|||+|+ ..+|
T Consensus 51 ----~~~~~~~~~-------~~~---~~~~~~~~~~~~~~~~~~~~l~pg~~~~i~~lk~~G---~~~~ivS~~~-~~~v 112 (217)
T d1nnla_ 51 ----AVPFKAALT-------ERL---ALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERN---VQVFLISGGF-RSIV 112 (217)
T ss_dssp ------CHHHHHH-------HHH---HHHCCCHHHHHHHHHHSCCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHH
T ss_pred ----CCCHHHHHH-------HHH---HhcccchHHHHHHHHhhccccCHHHHHHHHHHHhCC---CEEEEECCCc-hHHH
Confidence 222222221 122 4567866555555554 5779999999999999999 9999999998 8999
Q ss_pred HHHHhhcCCCceeEEeeceeec-Ccccccccc-ccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 422 RASFSSAGLNALNVHANEFSFK-ESISTGEII-EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 422 ~~~l~~~g~~~~~I~aN~l~~~-~g~~tG~~~-~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
+++++.+|++..+++||++.++ +|.+||... .++..+.+|...++.+....+ ..++++||||.||++|+..||+|
T Consensus 113 ~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~~~~~~---~~~~~~vGDs~~Di~~~~~ag~~ 189 (217)
T d1nnla_ 113 EHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFH---FKKIIMIGDGATDMEACPPADAF 189 (217)
T ss_dssp HHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHHHHHHC---CSCEEEEESSHHHHTTTTTSSEE
T ss_pred HHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHHHHHhccC---ccccEEEEeCHhhHHHHHhCCce
Confidence 9999999998778999999987 578888544 345677889999998876654 36899999999999999999999
Q ss_pred EEEcCChhHHHHHHhhCCce
Q 008479 500 IVIGSSSSLRRVGSQFGVTF 519 (564)
Q Consensus 500 iv~~~~~~L~~~~~~~gi~~ 519 (564)
|++++++.+..++++..|.+
T Consensus 190 va~~~~~~~~~~~~~ad~~i 209 (217)
T d1nnla_ 190 IGFGGNVIRQQVKDNAKWYI 209 (217)
T ss_dssp EEECSSCCCHHHHHHCSEEE
T ss_pred EEECCCHHHHHHHHhCCCEe
Confidence 99998877777776666544
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=4e-22 Score=191.47 Aligned_cols=201 Identities=17% Similarity=0.162 Sum_probs=142.2
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHHHHHHHHHHHHHHhhcCCCccccC
Q 008479 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (564)
Q Consensus 262 ~~~lii~DFD~TiT~~DT~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~y~~~~~~~~~~~~p~~~~~~ 341 (564)
+|.+|+||||||||..|++..+++.. ..+.|..+...|..+ .
T Consensus 3 ~k~lVifD~DGTL~~~d~~~~~~~~~-----------------------~~~~~~~i~~~~~~~-----------~---- 44 (226)
T d2feaa1 3 RKPFIICDFDGTITMNDNIINIMKTF-----------------------APPEWMALKDGVLSK-----------T---- 44 (226)
T ss_dssp CCEEEEECCTTTTBSSCHHHHHHHHH-----------------------SCTHHHHHHHHHHTT-----------S----
T ss_pred CCeEEEEeCCCCCcCchHHHHHHHHH-----------------------CcchHHHHHHHHHcC-----------c----
Confidence 68899999999999999998888754 224566665544322 1
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhhccCCCHHHHHHH-hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 008479 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKA-GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (564)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~-~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~ 420 (564)
+++... +. .. ...+.+...+.+... ...++++||+.++++.++++| ++++|+|+|. ..+
T Consensus 45 ~~~~~~------~~--------~~--~~~~~~~~~~~~~~~~~~~~~l~pg~~~~l~~L~~~g---~~~~ivS~~~-~~~ 104 (226)
T d2feaa1 45 LSIKEG------VG--------RM--FGLLPSSLKEEITSFVLEDAKIREGFREFVAFINEHE---IPFYVISGGM-DFF 104 (226)
T ss_dssp SCHHHH------HH--------HH--HTTSBGGGHHHHHHHHHHHCCBCTTHHHHHHHHHHHT---CCEEEEEEEE-HHH
T ss_pred ccHHHH------HH--------HH--HHHhccccHHHHHHHHHhccchhHHHHHHHHHHHhcc---cccccCCcch-hhh
Confidence 222221 11 11 123344445555544 457899999999999999999 9999999997 999
Q ss_pred HHHHHhhcCCCceeEEeeceeecCccccccc--ccc----CCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhh
Q 008479 421 IRASFSSAGLNALNVHANEFSFKESISTGEI--IEK----VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLL 494 (564)
Q Consensus 421 I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~--~~~----~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~ 494 (564)
++.+|+++|+ ...++||++.++++..++.+ ... ...+.+|..+++++ +. .+.+++|||||.||++|++
T Consensus 105 i~~~l~~l~~-~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~----~~-~~~~~i~iGDs~~Dl~~a~ 178 (226)
T d2feaa1 105 VYPLLEGIVE-KDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHEL----SE-PNQYIIMIGDSVTDVEAAK 178 (226)
T ss_dssp HHHHHTTTSC-GGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHHHHHH----CC-TTCEEEEEECCGGGHHHHH
T ss_pred HHHHHHHcCC-ccceeeeeEEEeCCcceeccccccccccccCCHHHHHHHHHHh----cC-CCceEEEEeCchhhHHHHH
Confidence 9999998875 46899999999875433222 222 23444555555543 33 3578999999999999999
Q ss_pred hcCccEEEcCChhHHHHHHhhCCceeecCc--hhHHh
Q 008479 495 EADIGIVIGSSSSLRRVGSQFGVTFIPLYP--GLVKK 529 (564)
Q Consensus 495 ~Ad~giv~~~~~~L~~~~~~~gi~~~p~~~--~~~~~ 529 (564)
.||+++++ ..+.++|++.++++.|+.+ +++..
T Consensus 179 ~A~~~~a~---~~~~~~~~~~~~~~~~~~d~~~i~~~ 212 (226)
T d2feaa1 179 LSDLCFAR---DYLLNECREQNLNHLPYQDFYEIRKE 212 (226)
T ss_dssp TCSEEEEC---HHHHHHHHHTTCCEECCSSHHHHHHH
T ss_pred HCCEEEEe---cchHHHHHHcCCCeeecCCHHHHHHH
Confidence 99976544 4589999999999999875 44433
|
| >d1otva_ a.132.1.4 (A:) Coenzyme PQQ synthesis protein C, PqqC {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: PqqC-like domain: Coenzyme PQQ synthesis protein C, PqqC species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.77 E-value=1.4e-19 Score=177.92 Aligned_cols=201 Identities=8% Similarity=0.042 Sum_probs=150.3
Q ss_pred CcchHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 008479 12 EEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV 91 (564)
Q Consensus 12 ~~~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i 91 (564)
....|.++|-.... . .-.+|||++++.+|+|+++.|+.|+.|||+|+.+|.|.++.++++++|++.+..+...+..-
T Consensus 7 ~~~~F~~~L~~~~~-~--~h~~HPF~~~l~~G~l~~e~l~~y~~Q~y~y~~~f~r~laai~a~~~d~~~r~~ll~nl~ee 83 (254)
T d1otva_ 7 SPQAFEEALRAKGD-F--YHIHHPYHIAMHNGDATRKQIQGWVANRFYYQTTIPLKDAAIMANCPDAQTRRKWVQRILDH 83 (254)
T ss_dssp CHHHHHHHHHHGGG-G--SGGGSHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-h--hcCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 45578888855431 1 12679999999999999999999999999999999999999999999999887765443222
Q ss_pred HH-H-----HHHHHHHHHHhCCCccc--c-cCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHH
Q 008479 92 LE-E-----LKMHDSFVKEWGTDLAK--M-ATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSP 162 (564)
Q Consensus 92 ~~-E-----~~~h~~~~~~~gi~~~~--~-~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~p 162 (564)
.. + .+++.++++.+|++.++ . .++.|+|+.|++++...+..+. +..++++++
T Consensus 84 ~g~~~~~~H~~l~~~f~~~lGl~~e~v~~~~~~lp~t~~~v~~~~~~~~~~~------------------~~~~~a~~~- 144 (254)
T d1otva_ 84 DGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGVRFAVDAYLNFARRAC------------------WQEAACSSL- 144 (254)
T ss_dssp HCSTTCCCHHHHHHHHHHHTTCCHHHHHTCTTCCHHHHHHHHHHHHHHHHSC------------------HHHHHHGGG-
T ss_pred hcccCCccHHHHHHHHHHHhCCCHHHHhccccCCHHHHHHHHHHHHHhcccc------------------HHHHHHHHH-
Confidence 10 1 67889999999999763 2 3458999999999999886433 123333333
Q ss_pred HHHHHHHHHHHHHhhccCCCCcccccccccccCChhHH-------HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 008479 163 CMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQ-------ASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKL 235 (564)
Q Consensus 163 C~~~Y~~i~~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~-------~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~l 235 (564)
+++.+..+.. . . ...-..|..|++.++-+.|. ..+....+++++++ .++++++++.++++.+|.+
T Consensus 145 ~E~~~p~i~~---~-~--~~gl~~~y~~i~~~~l~~F~~h~~~d~~h~e~~~~l~~~~~--~t~e~q~~~l~a~~~s~~~ 216 (254)
T d1otva_ 145 TELFAPQIHQ---S-R--LDSWPQHYPWIKEEGYFYFRSRLSQANRDVEHGLALAKAYC--DSAEKQNRMLEILQFKLDI 216 (254)
T ss_dssp GGGGCCSTTC---C-S--SCSSTTTCTTSCHHHHHHHHHHHHTCCSCTTHHHHHHHHHC--CSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHH---H-H--HHHHHHhcCccCHHHHHHHHHHHHHhHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHH
Confidence 3333333321 1 1 12345688899988877773 45566888999987 3789999999999999999
Q ss_pred HHHhhcc
Q 008479 236 EVEFFCA 242 (564)
Q Consensus 236 E~~Fw~~ 242 (564)
++.|||+
T Consensus 217 lw~flD~ 223 (254)
T d1otva_ 217 LWSMLDA 223 (254)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999996
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.70 E-value=7.8e-17 Score=150.82 Aligned_cols=137 Identities=20% Similarity=0.243 Sum_probs=113.7
Q ss_pred hhccCCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCcccc
Q 008479 369 GVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESIST 448 (564)
Q Consensus 369 ~~f~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~t 448 (564)
..+.+.....+........+.+|..++++.+..+| ..++++|+++ ..++.....+++. ..++++.+..+++..+
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~---~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 130 (210)
T d1j97a_ 57 SLLKDLPIEKVEKAIKRITPTEGAEETIKELKNRG---YVVAVVSGGF-DIAVNKIKEKLGL--DYAFANRLIVKDGKLT 130 (210)
T ss_dssp HTTTTCBHHHHHHHHHTCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHHTC--SEEEEEEEEEETTEEE
T ss_pred HHHhhhHHHHHHHHhhhhhhhhhHHHHHHHHHHcC---CEEEeecccc-cccccchhhccch--hhhhhhhhcccccccc
Confidence 44567778888887888999999999999999998 8999999998 8899988888764 5778888888776666
Q ss_pred ccccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHHHH
Q 008479 449 GEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVG 512 (564)
Q Consensus 449 G~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~~~ 512 (564)
+........+..|...+..+....+. .+.++++||||.||++|+..||+||++++.+.|++.|
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~iGDs~nDi~m~~~ag~~va~na~~~lk~~A 193 (210)
T d1j97a_ 131 GDVEGEVLKENAKGEILEKIAKIEGI-NLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKA 193 (210)
T ss_dssp EEEECSSCSTTHHHHHHHHHHHHHTC-CGGGEEEEESSGGGHHHHHHCSEEEEESCCHHHHTTC
T ss_pred ccccccccccccccchhhhHHHHhcc-cccceEEecCCcChHHHHHHCCCCEEECCCHHHHHhC
Confidence 55555566777888888888877766 3578999999999999999999999998888877554
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.40 E-value=1.9e-12 Score=120.05 Aligned_cols=124 Identities=19% Similarity=0.200 Sum_probs=92.3
Q ss_pred CCCHHHHHHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCcccccccc
Q 008479 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEII 452 (564)
Q Consensus 373 Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~ 452 (564)
+....++......+...++...++..++ ++ ..++++|+|+ ...+.......++ ...++|.+.+.++...+...
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~s~~~-~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~ 127 (206)
T d1rkua_ 55 GLKLGDIQEVIATLKPLEGAVEFVDWLR-ER---FQVVILSDTF-YEFSQPLMRQLGF--PTLLCHKLEIDDSDRVVGYQ 127 (206)
T ss_dssp TCCHHHHHHHHTTCCCCTTHHHHHHHHH-TT---SEEEEEEEEE-HHHHHHHHHHTTC--CCEEEEEEEECTTSCEEEEE
T ss_pred CCceehhhhhhhhccccchHHHHHHHhh-cC---ceEEEeccCc-hHHHHHHHHHhCC--chhhcceeeeeccccccccc
Confidence 5677788887788999999999998876 45 7899999999 8888888877664 67899999887654433222
Q ss_pred ccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHHH
Q 008479 453 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRR 510 (564)
Q Consensus 453 ~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~~ 510 (564)
. ..+..+...++.+.- ...++++||||.||++|++.||+||+|++.+.+++
T Consensus 128 ~--~~~~~~~~~~~~~~i-----~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~ 178 (206)
T d1rkua_ 128 L--RQKDPKRQSVIAFKS-----LYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIR 178 (206)
T ss_dssp C--CSSSHHHHHHHHHHH-----TTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHH
T ss_pred c--cchhhHHHHHHHhcc-----cccceEEecCCccCHHHHHhCCccEEECCCHHHHH
Confidence 1 222233333333322 24789999999999999999999999988776663
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.92 E-value=6.5e-09 Score=96.26 Aligned_cols=97 Identities=13% Similarity=0.150 Sum_probs=71.5
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
.+.+.||+.++++.++++| +++.|+|.+. .. +..+|++.|+... .|++.+ .....--|.
T Consensus 80 ~~~~~pgv~~~L~~L~~~g---~~~~v~Sn~~-~~-~~~~l~~~gl~~~f~~i~~s~--------------~~~~~Kp~~ 140 (204)
T d2go7a1 80 QVVLMPGAREVLAWADESG---IQQFIYTHKG-NN-AFTILKDLGVESYFTEILTSQ--------------SGFVRKPSP 140 (204)
T ss_dssp GCEECTTHHHHHHHHHHTT---CEEEEECSSC-TH-HHHHHHHHTCGGGEEEEECGG--------------GCCCCTTSS
T ss_pred cCcccchHHhhhhcccccc---cchhhhcccc-hh-hhhhhhhcccccccccccccc--------------cccccchhH
Confidence 5788999999999999998 9999999875 44 5568888886421 222221 011112255
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 501 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 501 (564)
..++..++..+. .+.++++|||+.+|+.++..+++..+
T Consensus 141 ~~~~~~~~~~~~-~p~~~l~VgD~~~Di~~A~~~G~~~i 178 (204)
T d2go7a1 141 EAATYLLDKYQL-NSDNTYYIGDRTLDVEFAQNSGIQSI 178 (204)
T ss_dssp HHHHHHHHHHTC-CGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHhCC-CCceEEEEeCCHHHHHHHHHcCCeEE
Confidence 677777877776 35899999999999999999998543
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=98.90 E-value=1.4e-08 Score=94.86 Aligned_cols=100 Identities=16% Similarity=0.120 Sum_probs=74.5
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCch
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
...++.||+.++++.++++| +++.|+|++. ...++.+++..|+.. ..|++.+ + .| .+--+
T Consensus 85 ~~~~~~pg~~~~l~~L~~~g---~~~~i~T~~~-~~~~~~~l~~~~l~~~F~~i~~~~----~---~~-------~~Kp~ 146 (218)
T d1te2a_ 85 ETRPLLPGVREAVALCKEQG---LLVGLASASP-LHMLEKVLTMFDLRDSFDALASAE----K---LP-------YSKPH 146 (218)
T ss_dssp HHCCBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEECT----T---SS-------CCTTS
T ss_pred ccccccchHHHHHHHhhhcc---cccccccccc-cccccccccccccccccccccccc----c---cc-------cchhh
Confidence 35678899999999999999 9999999986 889999999988742 1222221 0 01 11123
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEE
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
...++..++..+.+ +.++++||||.+|+.+++.+|+..+.
T Consensus 147 ~~~~~~~~~~l~~~-~~~~l~igD~~~di~aA~~~G~~~i~ 186 (218)
T d1te2a_ 147 PQVYLDCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSIV 186 (218)
T ss_dssp THHHHHHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCC-chhcEEEeeCHHHHHHHHHcCCEEEE
Confidence 45677777777763 58999999999999999999985443
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=98.89 E-value=1.9e-08 Score=93.80 Aligned_cols=102 Identities=14% Similarity=0.190 Sum_probs=73.6
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
....+.||+.+++..++++| +++.|+|.+. ...++.++++.|+... |+ .+.++.- ....-.|..
T Consensus 92 ~~~~l~~~~~~~L~~L~~~g---~~~~i~tn~~-~~~~~~~l~~~gl~~~--------f~-~~~~~~~---~~~~kp~p~ 155 (224)
T d2hsza1 92 NISRLYPNVKETLEALKAQG---YILAVVTNKP-TKHVQPILTAFGIDHL--------FS-EMLGGQS---LPEIKPHPA 155 (224)
T ss_dssp SSCEECTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHTTCGGG--------CS-EEECTTT---SSSCTTSSH
T ss_pred cccchHHHHHHHHHHHhccC---Cccccccccc-HHHHHHHHHhcCchhh--------cc-ccccccc---cccccccch
Confidence 35778999999999999999 9999999885 8899999999886321 11 1111110 111122445
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEE
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 502 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~ 502 (564)
.+..++...+. .+.++++||||.+|+.+.+.+|+ .|.+
T Consensus 156 ~~~~~~~~~~~-~~~~~~~igD~~~Di~~A~~aG~~~i~v 194 (224)
T d2hsza1 156 PFYYLCGKFGL-YPKQILFVGDSQNDIFAAHSAGCAVVGL 194 (224)
T ss_dssp HHHHHHHHHTC-CGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred hhHHHHHHhhh-hhhccchhcCcHHHHHHHHHcCCeEEEE
Confidence 66666666665 35899999999999999999998 3444
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.88 E-value=9.1e-09 Score=96.99 Aligned_cols=100 Identities=16% Similarity=0.223 Sum_probs=65.9
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH-
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ- 463 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~- 463 (564)
...+.||+.++++.++++| ++++.|+|++. ...+...|+..|+... |+ .+.++. .......+..
T Consensus 89 ~~~~~~g~~~~L~~L~~~g--~~~~~v~t~~~-~~~~~~~l~~~gl~~~--------fd-~i~~~~---~~~~~k~~p~~ 153 (228)
T d2hcfa1 89 DITLLEGVRELLDALSSRS--DVLLGLLTGNF-EASGRHKLKLPGIDHY--------FP-FGAFAD---DALDRNELPHI 153 (228)
T ss_dssp GEEECTTHHHHHHHHHTCT--TEEEEEECSSC-HHHHHHHHHTTTCSTT--------CS-CEECTT---TCSSGGGHHHH
T ss_pred CceecCchHHHHhhhhccc--cccccccCCCc-chhhhhhhhhhccccc--------cc-cccccc---ccccccchhHH
Confidence 4678899999999999874 26899999986 8899999999886421 11 111111 0111112223
Q ss_pred HHHHHHHHhCC-CCCccEEEEcCCccchhhhhhcCcc
Q 008479 464 AFNNTLEKYGT-DRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 464 ~l~~l~~~~~~-~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
.+.......+. -.+++++|||||.+|+.+...|++.
T Consensus 154 ~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~ 190 (228)
T d2hcfa1 154 ALERARRMTGANYSPSQIVIIGDTEHDIRCARELDAR 190 (228)
T ss_dssp HHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCE
T ss_pred HHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCE
Confidence 23333332221 1357899999999999999999984
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.88 E-value=8e-08 Score=90.51 Aligned_cols=96 Identities=17% Similarity=0.197 Sum_probs=70.1
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCchH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
...+.||+.++++.++ ++ ++++|+|.+. ...++..++..|+.. ..|++.. -.| .+--+.
T Consensus 98 ~~~~~p~~~~~L~~l~-~~---~~i~i~Sn~~-~~~~~~~l~~~gl~~~fd~i~~s~-------~~~-------~~KP~~ 158 (230)
T d1x42a1 98 YGELYPEVVEVLKSLK-GK---YHVGMITDSD-TEYLMAHLDALGIKDLFDSITTSE-------EAG-------FFKPHP 158 (230)
T ss_dssp HCCBCTTHHHHHHHHB-TT---BEEEEEESSC-HHHHHHHHHHHTCGGGCSEEEEHH-------HHT-------BCTTSH
T ss_pred hCcccccHHHHHHHhh-cc---Cceeeeeccc-cccchhhhcccccccccccccccc-------ccc-------ccchhh
Confidence 5788999999999996 46 8999999986 888999999888642 1222211 001 111134
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCC-ccchhhhhhcCccE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGI 500 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~gi 500 (564)
..++..++..+.. +.++++|||+ .+|+.++..+|+..
T Consensus 159 ~~~~~~~~~l~~~-p~~~l~vgD~~~~Di~~A~~~G~~~ 196 (230)
T d1x42a1 159 RIFELALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTS 196 (230)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEE
T ss_pred HHHHHHHhhhccc-ccccceeecCcHhHHHHHHHcCCEE
Confidence 6777777777764 5889999998 58999999999843
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=98.87 E-value=3.3e-09 Score=98.65 Aligned_cols=102 Identities=16% Similarity=0.210 Sum_probs=72.9
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchH
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 462 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 462 (564)
.+++.+.||+.++++.+++ + +++.|+|++. ...++..++++|+... |+ .+.++.- ...+-.+.
T Consensus 78 ~~~~~~~~g~~~~L~~l~~-~---~~~~ivT~~~-~~~~~~~l~~~~l~~~--------f~-~i~~~~~---~~~~KP~p 140 (207)
T d2hdoa1 78 YDQIELYPGITSLFEQLPS-E---LRLGIVTSQR-RNELESGMRSYPFMMR--------MA-VTISADD---TPKRKPDP 140 (207)
T ss_dssp GGGCEECTTHHHHHHHSCT-T---SEEEEECSSC-HHHHHHHHTTSGGGGG--------EE-EEECGGG---SSCCTTSS
T ss_pred ccccccccchhhhhhhhcc-c---cccccccccc-cccccccccccccccc--------cc-ccccccc---cccchhhh
Confidence 4467899999999999964 5 7999999997 8999999998875321 11 1111110 11112245
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEE
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
..++..+++.+.+ +.++++||||.+|+.+...+|+..++
T Consensus 141 ~~~~~~~~~~~~~-~~~~l~VgDs~~Di~~a~~aG~~~i~ 179 (207)
T d2hdoa1 141 LPLLTALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGL 179 (207)
T ss_dssp HHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred hhhcccccceeee-ccceeEecCCHHHHHHHHHcCCeEEE
Confidence 6777777776653 58899999999999999999986554
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.72 E-value=4.5e-08 Score=89.55 Aligned_cols=105 Identities=18% Similarity=0.199 Sum_probs=70.2
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCch-
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK- 461 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K- 461 (564)
..+..+.||+.++++.++++| ++++|+|.+ +...+ ..|+++++... +.. ++++.- .+..|
T Consensus 75 ~~~~~~~~gv~~~l~~l~~~g---~~~~i~Sn~-~~~~~-~~l~~~~l~~~------fd~---i~~~~~-----~~~~KP 135 (187)
T d2fi1a1 75 LEHPILFEGVSDLLEDISNQG---GRHFLVSHR-NDQVL-EILEKTSIAAY------FTE---VVTSSS-----GFKRKP 135 (187)
T ss_dssp TTSCCBCTTHHHHHHHHHHTT---CEEEEECSS-CTHHH-HHHHHTTCGGG------EEE---EECGGG-----CCCCTT
T ss_pred hhcCcccchhHHHHHHHHhhh---ccccccccC-ccchh-hhhhhhccccc------ccc---cccccc-----ccccCC
Confidence 346788999999999999998 999999976 45555 47888776321 111 111110 01122
Q ss_pred -HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc-EEEcCChhHH
Q 008479 462 -VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGSSSSLR 509 (564)
Q Consensus 462 -~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~~~~~~L~ 509 (564)
...++..++..+. +.+++|||+.+|+.+...+|+- |.+.....++
T Consensus 136 ~p~~~~~~~~~~~~---~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~ 182 (187)
T d2fi1a1 136 NPESMLYLREKYQI---SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLR 182 (187)
T ss_dssp SCHHHHHHHHHTTC---SSEEEEESSHHHHHHHHHTTCEEEECSCHHHHH
T ss_pred CHHHHHHHHHHcCC---CCeEEEeCCHHHHHHHHHcCCEEEEECCCCChH
Confidence 3455666666653 5699999999999999999994 5554444444
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.70 E-value=3e-08 Score=91.88 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=75.0
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
....+.||..++++.++.+ .++.|+|.+. ...++..+++.|+... | +.++++. ..+..|..
T Consensus 81 ~~~~~~~~~~~~l~~l~~~----~~~~i~t~~~-~~~~~~~l~~~gl~~~--------f-d~v~~~~-----~~~~~~p~ 141 (210)
T d2ah5a1 81 YEAQLFPQIIDLLEELSSS----YPLYITTTKD-TSTAQDMAKNLEIHHF--------F-DGIYGSS-----PEAPHKAD 141 (210)
T ss_dssp GSCEECTTHHHHHHHHHTT----SCEEEEEEEE-HHHHHHHHHHTTCGGG--------C-SEEEEEC-----SSCCSHHH
T ss_pred hcccchhHHHHHHhhhhcc----cchhhccccc-chhhhHHHHhhccccc--------c-ccccccc-----cccccccc
Confidence 3578899999999999865 4899999996 8999999999886321 1 1111111 12345677
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEc
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 503 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~ 503 (564)
.+...++..+. .+.++++||||.+|+.+...||+ .|.+.
T Consensus 142 ~~~~~~~~~~~-~~~~~v~VGDs~~Di~aa~~aGi~~i~v~ 181 (210)
T d2ah5a1 142 VIHQALQTHQL-APEQAIIIGDTKFDMLGARETGIQKLAIT 181 (210)
T ss_dssp HHHHHHHHTTC-CGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred ccchhhhhhhc-ccccceeecCCHHHHHHHHHcCCeEEEEc
Confidence 78888887776 45899999999999999999998 45553
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=98.66 E-value=1.3e-08 Score=97.72 Aligned_cols=97 Identities=13% Similarity=0.111 Sum_probs=69.3
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCch--H
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK--V 462 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K--~ 462 (564)
...+.||+.++++.++++| +++.|+|++. ...++.+|+..|+... |.+.+.++.- .+..| .
T Consensus 97 ~~~~~~g~~~~L~~Lk~~g---~~i~i~Tn~~-~~~~~~~l~~~~l~~~--------f~d~~~~~d~-----~~~~KP~p 159 (257)
T d1swva_ 97 YASPINGVKEVIASLRERG---IKIGSTTGYT-REMMDIVAKEAALQGY--------KPDFLVTPDD-----VPAGRPYP 159 (257)
T ss_dssp GCCBCTTHHHHHHHHHHTT---CEEEEBCSSC-HHHHHHHHHHHHHTTC--------CCSCCBCGGG-----SSCCTTSS
T ss_pred cCccCCcHHHHHHHHHhcc---cceeecCCCc-hhhHHHHHHHHhhccc--------cccccccccc-----ccccccCh
Confidence 4679999999999999999 9999999886 8999999988775221 1111111110 11112 2
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc
Q 008479 463 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 498 (564)
Q Consensus 463 ~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 498 (564)
..+...+...+..+.+.+++||||.+|+.+.+.||+
T Consensus 160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~ 195 (257)
T d1swva_ 160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGM 195 (257)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTS
T ss_pred HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCC
Confidence 445556666665334789999999999999999998
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.58 E-value=6.2e-08 Score=84.49 Aligned_cols=92 Identities=23% Similarity=0.300 Sum_probs=72.7
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHH
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 466 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 466 (564)
++||+..+.++.|++.| +.++|+|+.- ....+.+.++.|++ .++++ +...+|...++
T Consensus 21 ~lr~~a~~~I~~L~~~G---i~v~ilTGD~-~~~a~~ia~~lgI~--~v~~~-----------------~~p~~k~~~v~ 77 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMG---IKVGMITGDN-WRSAEAISRELNLD--LVIAE-----------------VLPHQKSEEVK 77 (135)
T ss_dssp CBCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCS--EEECS-----------------CCHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHcC---CEEEEEcCcc-hhhhhHHHhhhhhh--hhccc-----------------cchhHHHHHHH
Confidence 69999999999999999 9999999985 78888888888862 22221 23346888877
Q ss_pred HHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChh
Q 008479 467 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 507 (564)
Q Consensus 467 ~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~ 507 (564)
++.. +..+.++|||.||.++|..||+||+++....
T Consensus 78 ~~q~------~~~v~~vGDg~nD~~aL~~Advgia~~~~~~ 112 (135)
T d2b8ea1 78 KLQA------KEVVAFVGDGINDAPALAQADLGIAVGSGSD 112 (135)
T ss_dssp HHTT------TSCEEEEECSSSSHHHHHHSSEEEEECCC--
T ss_pred HHHc------CCEEEEEeCCCCcHHHHHhCCeeeecCccCH
Confidence 7653 3578899999999999999999999986543
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=98.57 E-value=8.9e-07 Score=81.99 Aligned_cols=99 Identities=14% Similarity=0.104 Sum_probs=73.2
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCCCCc
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPID 460 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 460 (564)
.......|+..++++.+++++ +++.|+|.+. ...++..+...++.. ..+++.. ..+..
T Consensus 89 ~~~~~~~~~~~~~l~~l~~~~---~~~~i~tn~~-~~~~~~~~~~~~~~~~fd~~~~s~----------------~~~~~ 148 (220)
T d1zrna_ 89 YLRLAPFSEVPDSLRELKRRG---LKLAILSNGS-PQSIDAVVSHAGLRDGFDHLLSVD----------------PVQVY 148 (220)
T ss_dssp GGGCEECTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEESG----------------GGTCC
T ss_pred hccccccchhHHHHHHHHhcC---CeEEeecchH-HHHHHHHHhhccccccccceeeee----------------eeecc
Confidence 346788999999999999988 9999999886 788888888766421 1222211 11223
Q ss_pred hH--HHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc-EEE
Q 008479 461 KV--QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVI 502 (564)
Q Consensus 461 K~--~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-iv~ 502 (564)
|. ..++..++..+. .+.++++|||+..|+.+.+.||+. |.+
T Consensus 149 KP~p~~~~~~~~~~g~-~p~e~l~VgD~~~Di~~A~~aG~~~v~v 192 (220)
T d1zrna_ 149 KPDNRVYELAEQALGL-DRSAILFVASNAWDATGARYFGFPTCWI 192 (220)
T ss_dssp TTSHHHHHHHHHHHTS-CGGGEEEEESCHHHHHHHHHHTCCEEEE
T ss_pred ccHHHHHHHHHHHhCC-CCceEEEEecChHhHHHHHHcCCEEEEE
Confidence 43 567777777776 458999999999999999999984 445
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.54 E-value=2.7e-06 Score=80.31 Aligned_cols=99 Identities=20% Similarity=0.302 Sum_probs=71.4
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCch--
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK-- 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K-- 461 (564)
+...+.||+.++++.+++ + ++++|+|.+- ...++..+.+.|+... | +.++++. ..+..|
T Consensus 106 ~~~~~~~~~~~~L~~L~~-~---~~l~i~Tn~~-~~~~~~~l~~~gl~~~--------f-d~i~~s~-----~~~~~KP~ 166 (247)
T d2gfha1 106 QHMILADDVKAMLTELRK-E---VRLLLLTNGD-RQTQREKIEACACQSY--------F-DAIVIGG-----EQKEEKPA 166 (247)
T ss_dssp HTCCCCHHHHHHHHHHHT-T---SEEEEEECSC-HHHHHHHHHHHTCGGG--------C-SEEEEGG-----GSSSCTTC
T ss_pred ccCccCccHHHHHHHhhc-c---cceEEeeccc-chhhhhhhhhcccccc--------c-ccccccc-----ccccchhh
Confidence 367899999999999984 6 7999999885 8899999998886321 1 1111110 112234
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCcc-EEE
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG-IVI 502 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~g-iv~ 502 (564)
...++..+...+.. +.++++|||+. +|+.+...+|+. +++
T Consensus 167 p~~~~~~~~~~~~~-~~~~l~iGD~~~~Di~~A~~~G~~~~~~ 208 (247)
T d2gfha1 167 PSIFYHCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVW 208 (247)
T ss_dssp HHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEE
T ss_pred hhhHHHHHHHhhcC-HHhcceeccChHhHHHHHHHcCCeEEEE
Confidence 46777777777763 57899999996 899999999985 444
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=98.53 E-value=8.4e-07 Score=83.09 Aligned_cols=101 Identities=12% Similarity=0.131 Sum_probs=72.4
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce-eEEeeceeecCccccccccccCCCCCchHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL-NVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
...+.||..+++..++++| +++.|+|.+- ...++..+...++... ..++.- +++ + ..+--+..
T Consensus 125 ~~~~~pg~~e~l~~L~~~g---~~l~i~Tn~~-~~~~~~~~~~~~~~~~~~~~~~~--~d~----~------~~~KP~p~ 188 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAG---MKVYIYSSGS-VEAQKLLFGHSTEGDILELVDGH--FDT----K------IGHKVESE 188 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHTBTTBCCGGGCSEE--ECG----G------GCCTTCHH
T ss_pred ccccCCCHHHHHHHHhhcc---CceeecCCCc-HHHHHHHHHHcCcchhhhhccee--ecc----c------cccCCCcH
Confidence 4678999999999999999 9999999985 8888888887764211 000000 110 0 01122456
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEE
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 502 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~ 502 (564)
.+...++..+.+ +.++++|||+.+|+.+...||+ .|++
T Consensus 189 ~~~~~~~~~~~~-p~~~l~vgD~~~dv~aA~~aG~~ti~v 227 (253)
T d1zs9a1 189 SYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVV 227 (253)
T ss_dssp HHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhCCC-cCcEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 777777777764 5899999999999999999999 4444
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=98.47 E-value=1.6e-07 Score=84.61 Aligned_cols=108 Identities=13% Similarity=0.142 Sum_probs=70.4
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhc-CCC--ceeEEeeceeecCccccccccccCCCCCch
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSA-GLN--ALNVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~-g~~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
...+.+|..+++..++++| +.+.|+|.+. .......+... ++. ...+++.+ ..| .+--+
T Consensus 82 ~~~~~~~~~~l~~~l~~~~---~~~~i~t~~~-~~~~~~~~~~~~~l~~~fd~v~~s~-------~~~-------~~Kp~ 143 (197)
T d2b0ca1 82 FVALRPEVIAIMHKLREQG---HRVVVLSNTN-RLHTTFWPEEYPEIRDAADHIYLSQ-------DLG-------MRKPE 143 (197)
T ss_dssp EEEECHHHHHHHHHHHHTT---CEEEEEECCC-CCTTSCCGGGCHHHHHHCSEEEEHH-------HHT-------CCTTC
T ss_pred ccccCchhHHHHHHHHhcC---CeEEEEeCcc-HHHHHHHHHHcccchhhccceeecc-------ccc-------ccccc
Confidence 4578999999999999988 9999999774 22222222221 110 01122211 001 11124
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEcCChhHHHH
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSSLRRV 511 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~~~~~L~~~ 511 (564)
...++..++..+.+ +.++++||||.+|+.+...+|+ +|.+.++..+.+.
T Consensus 144 ~~~~~~~~~~~~~~-~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~~~~~~ 193 (197)
T d2b0ca1 144 ARIYQHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDY 193 (197)
T ss_dssp HHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCSTTHHHHH
T ss_pred hHHHHHHHHhcCCC-CCeEEEEeCCHHHHHHHHHcCCEEEEECCCCCCHHh
Confidence 56677777777763 5899999999999999999999 7777766555443
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=98.46 E-value=5.8e-07 Score=83.54 Aligned_cols=101 Identities=14% Similarity=0.164 Sum_probs=70.1
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHH
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 464 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 464 (564)
...+.||+.++++.++++| +++.++|.+- .....++..|+... |+ .+.++. ....+--+...
T Consensus 89 ~~~~~~g~~~~l~~l~~~~---~~i~i~s~~~---~~~~~l~~~~l~~~--------f~-~i~~~~---~~~~~KP~~~~ 150 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNK---IKIALASASK---NGPFLLERMNLTGY--------FD-AIADPA---EVAASKPAPDI 150 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTT---CEEEECCSCT---THHHHHHHTTCGGG--------CS-EECCTT---TSSSCTTSTHH
T ss_pred cccccCCceeccccccccc---cceEEEeecc---hhhHHHHhhccccc--------cc-cccccc---cccccccChHH
Confidence 4678899999999999988 9999999753 35667777665221 11 111111 01111123467
Q ss_pred HHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEcC
Q 008479 465 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGS 504 (564)
Q Consensus 465 l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~~ 504 (564)
++..++..+.+ +.++++|||+.+|+.+++.+|+ .|.++.
T Consensus 151 ~~~~l~~~~i~-~~~~l~VgD~~~di~~A~~aG~~~i~v~~ 190 (221)
T d1o08a_ 151 FIAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGVGR 190 (221)
T ss_dssp HHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHcCCC-CceEEEEecCHHHHHHHHHcCCEEEEECC
Confidence 88888888774 5889999999999999999998 566653
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.44 E-value=4.9e-07 Score=84.10 Aligned_cols=46 Identities=20% Similarity=0.230 Sum_probs=35.9
Q ss_pred CCCchHHHHHHHHH---HhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 457 SPIDKVQAFNNTLE---KYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 457 ~g~~K~~~l~~l~~---~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
.+.+|...++.+++ ..+.+ ...++++|||.||++|+..||+||+|.
T Consensus 181 ~~~~K~~~~~~l~~~~~~l~i~-~~~~iafGD~~NDl~Ml~~a~~~vaV~ 229 (232)
T d1xvia_ 181 ASAGKDQAANWIIATYQQLSGK-RPTTLGLGDGPNDAPLLEVMDYAVIVK 229 (232)
T ss_dssp TTCCHHHHHHHHHHHHHHHHSS-CCEEEEEESSGGGHHHHHTSSEEEECC
T ss_pred CCchHHHHHHHHHHHHHHcCCC-hhcEEEEcCCHhHHHHHHhCCeEEEEe
Confidence 34577777666654 33442 468999999999999999999999996
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.43 E-value=3.5e-07 Score=85.17 Aligned_cols=101 Identities=16% Similarity=0.191 Sum_probs=68.8
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCch--
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK-- 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K-- 461 (564)
....+.||..++++.++ .+..|+|++. ...++.++.+.++... |+..++++.- ...+..|
T Consensus 82 ~~~~~~~g~~~~L~~l~------~~~~i~t~~~-~~~~~~~l~~~~l~~~--------f~~~~~~~~~---~~~~~~KP~ 143 (222)
T d2fdra1 82 RDVKIIDGVKFALSRLT------TPRCICSNSS-SHRLDMMLTKVGLKPY--------FAPHIYSAKD---LGADRVKPK 143 (222)
T ss_dssp HHCCBCTTHHHHHHHCC------SCEEEEESSC-HHHHHHHHHHTTCGGG--------TTTCEEEHHH---HCTTCCTTS
T ss_pred hccchhhhHHHHhhhcc------ccceeeeecc-hhhhhhhhcccccccc--------cceeeccccc---ccccccccC
Confidence 35789999999998764 4678999886 8899999999886321 1111111110 0011122
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEc
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 503 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~ 503 (564)
...+...+...+. .+.++++||||..|+.+...+++ .|.+.
T Consensus 144 ~~~~~~~~~~l~~-~p~~~l~vgDs~~dv~aA~~aG~~~i~v~ 185 (222)
T d2fdra1 144 PDIFLHGAAQFGV-SPDRVVVVEDSVHGIHGARAAGMRVIGFT 185 (222)
T ss_dssp SHHHHHHHHHHTC-CGGGEEEEESSHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHhhCC-CCceEEEEcCCHHHHHHHHHcCCEEEEEc
Confidence 3556666766666 35899999999999999999998 45564
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=98.41 E-value=6e-06 Score=77.42 Aligned_cols=97 Identities=14% Similarity=0.132 Sum_probs=69.5
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCce--eEEeeceeecCccccccccccCCCCCch
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDK 461 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K 461 (564)
......|+..+.++.++ + ..+.++|.+. ...+...+...++... .|++.+ ..+..|
T Consensus 90 ~~~~~~~~~~~~L~~l~--~---~~~~v~s~~~-~~~~~~~~~~~~~~~~fd~v~~s~----------------~~~~~K 147 (245)
T d1qq5a_ 90 NRLTPYPDAAQCLAELA--P---LKRAILSNGA-PDMLQALVANAGLTDSFDAVISVD----------------AKRVFK 147 (245)
T ss_dssp GSCCBCTTHHHHHHHHT--T---SEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEGG----------------GGTCCT
T ss_pred cccccchhhhHHHHHHh--h---hceeEEeccc-hHHHHHHHhhcccccccccccccc----------------cccccC
Confidence 35788899999998875 4 6788999886 7888888888775321 222211 112234
Q ss_pred --HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEc
Q 008479 462 --VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 503 (564)
Q Consensus 462 --~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~ 503 (564)
...++..++..+.. +.++++|||+.+|+.+...||+ .|.+.
T Consensus 148 P~p~~f~~a~~~lg~~-p~e~l~VgD~~~di~~A~~aG~~tv~v~ 191 (245)
T d1qq5a_ 148 PHPDSYALVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVA 191 (245)
T ss_dssp TSHHHHHHHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEEC
T ss_pred ccHHHHHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHcCCeEEEEc
Confidence 35667777777763 5899999999999999999998 45554
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.37 E-value=5e-07 Score=83.77 Aligned_cols=118 Identities=14% Similarity=0.102 Sum_probs=76.7
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccC---HHHHHHHHhhcCCCc--eeEEeeceeecCccccccccccCCC
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC---GDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVES 457 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s---~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~ 457 (564)
.....++||+.+++..++++| +++.|+|.+.. ....+..+...++.+ ..+++++- .| .
T Consensus 93 ~~~~~~~~~~~~~L~~L~~~~---~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~-------~~-------~ 155 (222)
T d1cr6a1 93 MAARSINRPMLQAAIALKKKG---FTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQ-------VG-------M 155 (222)
T ss_dssp HHTCEECHHHHHHHHHHHHTT---CEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHH-------HS-------C
T ss_pred HhcCCCCccHHHHHHHHHhcC---CceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhh-------cc-------C
Confidence 346789999999999999999 99999997531 223344444333321 22333220 01 1
Q ss_pred CCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEcCC-hhHHHHHHhhCCc
Q 008479 458 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS-SSLRRVGSQFGVT 518 (564)
Q Consensus 458 g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~~~-~~L~~~~~~~gi~ 518 (564)
+--....++..++..+.. +.++++|||+.+|+.+...+|+ +|.+... ..+.++.+-.|+.
T Consensus 156 ~KP~p~~~~~~~~~~~v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el~~~~~~~ 217 (222)
T d1cr6a1 156 IKPEPQIYNFLLDTLKAK-PNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRELEKVTGTQ 217 (222)
T ss_dssp CTTCHHHHHHHHHHHTSC-TTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHHHHHHSCC
T ss_pred CCCChHHHHHHHHHhCCC-cceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHHHHHhhCCC
Confidence 111346666677776663 5889999999999999999998 6777533 4455555555665
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.37 E-value=2.3e-07 Score=83.82 Aligned_cols=108 Identities=18% Similarity=0.157 Sum_probs=78.6
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccc-----------------
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTG----------------- 449 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG----------------- 449 (564)
++||+..+.++.|++.| +.++++|+.- ......+.++.|+... .....+...+|
T Consensus 20 p~R~~~~~~I~~l~~~G---I~v~miTGD~-~~tA~~ia~~~Gi~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 90 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAG---IRVIMITGDN-KGTAIAICRRIGIFGE-----NEEVADRAYTGREFDDLPLAEQREACRR 90 (168)
T ss_dssp CBCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHTTSSCT-----TCCCTTTEEEHHHHHHSCHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHCc---CEEEEECCCC-HHHHHHHHHHcCCCCC-----ccccccccccccccchhhHHHHhhhhhh
Confidence 78999999999999999 9999999984 7888888888775211 11111111111
Q ss_pred -cccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCChhHH
Q 008479 450 -EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLR 509 (564)
Q Consensus 450 -~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~~~L~ 509 (564)
.+.. -++..+|...++.+... +..+.++|||.||.++|..||+||.++....++
T Consensus 91 ~~v~a-r~~p~~K~~lv~~l~~~-----g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a 145 (168)
T d1wpga2 91 ACCFA-RVEPSHKSKIVEYLQSY-----DEITAMTGDGVNDAPALKKAEIGIAMGSGTAVA 145 (168)
T ss_dssp CCEEE-SCCHHHHHHHHHHHHHT-----TCCEEEEECSGGGHHHHHHSSEEEEETTSCHHH
T ss_pred hhhhh-ccchhHHHHHHHHHHhc-----ccceeEEecCCCCHHHHHhCCEEEEeccccHHH
Confidence 0001 23556899988888763 367889999999999999999999998655444
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.30 E-value=1.1e-06 Score=81.85 Aligned_cols=125 Identities=19% Similarity=0.324 Sum_probs=97.3
Q ss_pred cCCCHHHHHHHhh-cCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecC-cc---
Q 008479 372 KGINLEDIKKAGE-RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE-SI--- 446 (564)
Q Consensus 372 ~Gi~~~~i~~~~~-~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~-g~--- 446 (564)
.|++-+++.++.+ ++.+-||+.+.++.+++. .|.+|||-++ ..+|+.+....|++ .++++.++.++. ..
T Consensus 65 ~Gvt~edL~~fSE~~~~lvpgA~~~lk~l~~~----m~~yIvSTSY-~qyi~al~~~~gfp-~e~~~T~~~lD~~~~p~e 138 (308)
T d1y8aa1 65 AGVKNRDVERIAELSAKFVPDAEKAMATLQER----WTPVVISTSY-TQYLRRTASMIGVR-GELHGTEVDFDSIAVPEG 138 (308)
T ss_dssp TTCCHHHHHHHHHHHCCBCTTHHHHHHHHHTT----CEEEEEEEEE-HHHHHHHHHHTTCC-SEEEEEBCCGGGCCCCHH
T ss_pred hCCCHHHHHHHhhhceeecCCHHHHHHHHHhh----CCcEEEeccH-HHHHHHHHhhcCCC-ceeecccccccccCCChH
Confidence 6899999999988 899999999999999875 7999999999 89999999998986 569999998872 11
Q ss_pred ------------ccc-------------------ccc--ccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhh
Q 008479 447 ------------STG-------------------EII--EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCL 493 (564)
Q Consensus 447 ------------~tG-------------------~~~--~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l 493 (564)
..| ++. -+...|..|.++++.++...+.. -..|||||.||..||
T Consensus 139 e~e~ll~i~~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~---~~~~VGDSITDve~L 215 (308)
T d1y8aa1 139 LREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGID---FPVVVGDSISDYKMF 215 (308)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCS---SCEEEECSGGGHHHH
T ss_pred HHHHHHHHhhhccCccHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCC---cceeccCccccHHHH
Confidence 111 111 02444567888888888777653 359999999999999
Q ss_pred hhc----CccEEEcCC
Q 008479 494 LEA----DIGIVIGSS 505 (564)
Q Consensus 494 ~~A----d~giv~~~~ 505 (564)
+.+ ++.|.|..+
T Consensus 216 r~~r~~gGlaIsFNGN 231 (308)
T d1y8aa1 216 EAARGLGGVAIAFNGN 231 (308)
T ss_dssp HHHHHTTCEEEEESCC
T ss_pred HHHhcCCCeeEEecCc
Confidence 997 334555444
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.27 E-value=1e-06 Score=80.99 Aligned_cols=121 Identities=12% Similarity=0.099 Sum_probs=74.9
Q ss_pred HHHhhcCCCCccHHHHHHHHHHcCCCCCcEEEEccccC---HHHHHHHHhhcCCC--ceeEEeeceeecCcccccccccc
Q 008479 380 KKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC---GDLIRASFSSAGLN--ALNVHANEFSFKESISTGEIIEK 454 (564)
Q Consensus 380 ~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s---~~~I~~~l~~~g~~--~~~I~aN~l~~~~g~~tG~~~~~ 454 (564)
........+.||+.+++..++++| +++.|+|.+.. ...++......++. ...|++.. .
T Consensus 92 ~~~~~~~~~~~~~~~~l~~L~~~~---~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~--------------~ 154 (225)
T d1zd3a1 92 DKAISARKINRPMLQAALMLRKKG---FTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESC--------------Q 154 (225)
T ss_dssp HHHHHHCEECHHHHHHHHHHHHTT---CEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHH--------------H
T ss_pred HHHhhcCCCCccHHHHHHHHHhcc---CccccccccchhhHHHHHHHHhhhcChHhhccEEEecc--------------c
Confidence 334557889999999999999999 99999997642 11222222222211 12222221 0
Q ss_pred CCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEcCCh-hHHHHHHhhCCc
Q 008479 455 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSS-SLRRVGSQFGVT 518 (564)
Q Consensus 455 ~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~~~~-~L~~~~~~~gi~ 518 (564)
...+--+...++..++..+.. +.++++|||+.+|+.+...+|+ +|.+.... .+.++-+-.|++
T Consensus 155 ~~~~KP~~~~~~~~~~~~~~~-p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~~~~~l~~~~~~~ 219 (225)
T d1zd3a1 155 VGMVKPEPQIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKELEKVTGIQ 219 (225)
T ss_dssp HTCCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECSSHHHHHHHHHHHHTSC
T ss_pred cccchhHHHHHHHHhhhcccC-ccceeEEecCHHHHHHHHHcCCEEEEECCcchhHHHHHHccCcc
Confidence 111112346777777777764 5889999999999999999999 66665433 233333334443
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.18 E-value=6.7e-06 Score=76.70 Aligned_cols=55 Identities=22% Similarity=0.207 Sum_probs=46.4
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
.+.+|...++.+++..+.+ ..++++||||.||++|+..||+||+++ +.+.+++.+
T Consensus 148 ~~~~K~~ai~~l~~~~~i~-~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~~k~~a 203 (225)
T d1l6ra_ 148 RGEDKAFAVNKLKEMYSLE-YDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVS 203 (225)
T ss_dssp TTCSHHHHHHHHHHHTTCC-GGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHC
T ss_pred CccchHHHHHHHhhhhccc-hhheeeecCCcchHHHHHHCCeEEEECCCcHHHHHhC
Confidence 3578999999999988774 478999999999999999999999996 566666544
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.14 E-value=5.3e-06 Score=76.76 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=46.3
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
.+..|...++.++...+.+ ...+++||||.||++|+..||+||+++ +.+.+++.|
T Consensus 149 ~~~~K~~al~~l~~~~~i~-~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~~k~~A 204 (230)
T d1wr8a_ 149 PWINKGSGIEKASEFLGIK-PKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENA 204 (230)
T ss_dssp TTCCHHHHHHHHHHHHTSC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTC
T ss_pred CCcCcchhhcccccccccc-hhheeeeecCccHHHHHHHCCeEEEECCCCHHHHHhC
Confidence 4678999999999888764 478999999999999999999999996 556666555
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.13 E-value=7.2e-06 Score=78.89 Aligned_cols=54 Identities=20% Similarity=0.318 Sum_probs=46.4
Q ss_pred CCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 458 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 458 g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
+.+|...++.+++..+.+ .++++++|||.||++|+..|++||+++ +.+.+++.+
T Consensus 211 ~~~K~~ai~~l~~~~gi~-~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A 265 (285)
T d1nrwa_ 211 KASKGQALKRLAKQLNIP-LEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIA 265 (285)
T ss_dssp TCSHHHHHHHHHHHTTCC-GGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHC
T ss_pred cchhhhHHHHHHhhcccC-cccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhC
Confidence 358999999999988773 578999999999999999999999997 556777666
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.94 E-value=1.8e-05 Score=70.33 Aligned_cols=98 Identities=12% Similarity=0.036 Sum_probs=73.1
Q ss_pred hcCCCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 384 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
+.+.+.||+.++++.++++| +++.|+|.+....+.+.+++.+++... ...+. .....|..
T Consensus 43 ~~~~l~pgv~e~L~~L~~~G---~~~~v~S~~~~~~~~~~~l~~~~~~~~---------~~~~~--------~~~kp~~~ 102 (164)
T d1u7pa_ 43 QNIQLYPEVPEVLGRLQSLG---VPVAAASRTSEIQGANQLLELFDLGKY---------FIQRE--------IYPGSKVT 102 (164)
T ss_dssp CEECCCTTHHHHHHHHHHTT---CCEEEEECCSCHHHHHHHHHHTTCGGG---------CSEEE--------ESSSCHHH
T ss_pred cccccchHHHHHHHHHHHCC---CcEEEEeccccchhhccchhccccccc---------ceeee--------cccCCChH
Confidence 35789999999999999999 999999987655667777777664211 00011 11224667
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEE
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 502 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~ 502 (564)
.+.++++..+. .++++++|||+..|+.++..+++-.+.
T Consensus 103 ~~~~~~~~~~~-~~~~~l~igD~~~di~aA~~aG~~~i~ 140 (164)
T d1u7pa_ 103 HFERLHHKTGV-PFSQMVFFDDENRNIIDVGRLGVTCIH 140 (164)
T ss_dssp HHHHHHHHHCC-CGGGEEEEESCHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHhCC-ChHHEEEEcCCHHHHHHHHHcCCEEEE
Confidence 78888888876 358999999999999999999984443
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.93 E-value=6.6e-06 Score=77.57 Aligned_cols=62 Identities=16% Similarity=0.192 Sum_probs=54.5
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHHhhCCc
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVT 518 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~~~gi~ 518 (564)
..+.+|...++.+.+..+.+ ..+++++|||.||++|+..+|+||+++ +.+.|++.+...+..
T Consensus 158 ~~~~~K~~a~~~l~~~~gi~-~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~ 220 (244)
T d1s2oa1 158 PQRSNKGNATQYLQQHLAME-PSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDS 220 (244)
T ss_dssp ETTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCT
T ss_pred eCccchhHHHHHHHHhccCC-hhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhccccc
Confidence 46778999999999988874 478999999999999999999999996 678999999887765
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=97.79 E-value=1.9e-05 Score=75.35 Aligned_cols=75 Identities=16% Similarity=0.255 Sum_probs=57.8
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHHhhCCceeecC---chhHHhHH
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLY---PGLVKKQK 531 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~~~gi~~~p~~---~~~~~~~~ 531 (564)
..+.+|...++.+++..+.+ .++++++|||.||++|+..|++||+|+ +.+.|++.|. ++--. .|++..++
T Consensus 186 p~~~sK~~al~~l~~~lgi~-~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~-----~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 186 IPGLHKANGISRLLKRWDLS-PQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIAR-----YATDDNNHEGALNVIQ 259 (269)
T ss_dssp CTTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCS-----EECCCGGGTHHHHHHH
T ss_pred cCchHHHHHHHHHhhhhccc-cccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCC-----EEcCCCCccHHHHHHH
Confidence 34668999999999988874 478999999999999999999999997 5577887773 34222 35666666
Q ss_pred hhhcC
Q 008479 532 EYTEG 536 (564)
Q Consensus 532 ~~~~~ 536 (564)
.+.++
T Consensus 260 ~~l~~ 264 (269)
T d1rlma_ 260 AVLDN 264 (269)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 66554
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=97.76 E-value=2.4e-05 Score=70.80 Aligned_cols=91 Identities=16% Similarity=0.265 Sum_probs=66.1
Q ss_pred HHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCceeEEeeceeecCccccccccccCCCCCchHHHHHHHHHHhCCC
Q 008479 396 FQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 475 (564)
Q Consensus 396 l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~ 475 (564)
+..+++.| +.+.++|+.- ...++..+.+.++. .++. ...+|...++.+++..+..
T Consensus 41 i~~l~~~g---i~~~iis~~~-~~~v~~~~~~l~~~--~~~~-------------------~~~~K~~~l~~~~~~~~i~ 95 (177)
T d1k1ea_ 41 IKMLMDAD---IQVAVLSGRD-SPILRRRIADLGIK--LFFL-------------------GKLEKETACFDLMKQAGVT 95 (177)
T ss_dssp HHHHHHTT---CEEEEEESCC-CHHHHHHHHHHTCC--EEEE-------------------SCSCHHHHHHHHHHHHTCC
T ss_pred HHHHhhhc---EEEEEecCCc-hhHHHHHHhhhccc--cccc-------------------ccccHHHHHHHHHHHhcCC
Confidence 45566777 9999999875 46666666665541 1111 2346888899998888773
Q ss_pred CCccEEEEcCCccchhhhhhcCccEEEcC-ChhHHHHH
Q 008479 476 RKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG 512 (564)
Q Consensus 476 ~~~~viyiGDs~~Dl~~l~~Ad~giv~~~-~~~L~~~~ 512 (564)
.++++|+||+.||++||..|++++++++ .+.+++.|
T Consensus 96 -~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A 132 (177)
T d1k1ea_ 96 -AEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAV 132 (177)
T ss_dssp -GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTS
T ss_pred -cceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhC
Confidence 5899999999999999999999988874 34444333
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=97.72 E-value=1.1e-05 Score=82.05 Aligned_cols=109 Identities=14% Similarity=0.094 Sum_probs=67.1
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHhhcCCCc----eeEEeeceeec------Cccccccccc---
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA----LNVHANEFSFK------ESISTGEIIE--- 453 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~----~~I~aN~l~~~------~g~~tG~~~~--- 453 (564)
..+||..++++.|+++| +++.|+|+.- ....+.++++.|+.. ..+++..=... +....++..+
T Consensus 215 ~p~~~v~~~l~~lk~aG---i~v~i~Tg~~-~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~ 290 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAG---FELGIATGRP-YTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSY 290 (380)
T ss_dssp SCHHHHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHH
T ss_pred cchhhHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHH
Confidence 35569999999999999 9999999996 899999999988632 22332211000 0000011000
Q ss_pred ------cCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcC---ccEEEcC
Q 008479 454 ------KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD---IGIVIGS 504 (564)
Q Consensus 454 ------~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad---~giv~~~ 504 (564)
.......|.++.+ ..+. .+..++++|||.+|+++++.|| |||.+|-
T Consensus 291 ~~~~~~~~~~~~~k~~iv~----~~~~-~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~ 345 (380)
T d1qyia_ 291 IAALYGNNRDKYESYINKQ----DNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGL 345 (380)
T ss_dssp HHHHHCCCGGGHHHHHHCC----TTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEESCBT
T ss_pred HHHHHHcCCCHHHHHHHHH----HhCC-CCCeEEEECCCHHHHHHHHHCCCCEEEEecCC
Confidence 0001111221111 1122 3568999999999999999999 6877763
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=97.65 E-value=8.6e-05 Score=68.85 Aligned_cols=109 Identities=14% Similarity=0.141 Sum_probs=68.6
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEcc-------ccC-------HHHHHHHHhhcCCCceeEEeeceeecCccccccc
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSY-------CWC-------GDLIRASFSSAGLNALNVHANEFSFKESISTGEI 451 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~-------g~s-------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~ 451 (564)
+.+.||..+.++.++++| ++++|||- .++ ...+...|+..|+....++.....- ++. +..
T Consensus 47 ~~l~pgv~e~L~~L~~~G---~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~-~~~--~~~ 120 (209)
T d2o2xa1 47 IVLRPQMLPAIATANRAG---IPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHE-AGV--GPL 120 (209)
T ss_dssp CCBCGGGHHHHHHHHHHT---CCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCT-TCC--STT
T ss_pred eEecccHHHHHHHHHhhC---CeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEecccc-ccc--ccc
Confidence 568899999999999999 99999994 111 1234445566664333444333211 111 000
Q ss_pred cccCCCCCch--HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEE
Q 008479 452 IEKVESPIDK--VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 502 (564)
Q Consensus 452 ~~~~~~g~~K--~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~ 502 (564)
.... +..-| ...+.+.++..+.+ ..+++||||+.+|+.+...|++ ++++
T Consensus 121 ~~~~-~~~rKP~p~ml~~a~~~~~i~-~~~~~~VGD~~~Di~aA~~AGi~~i~v 172 (209)
T d2o2xa1 121 AIPD-HPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWL 172 (209)
T ss_dssp CCSS-CTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEE
T ss_pred cccc-cccccccchhhhHhHHHhCCC-ccceEEeCCCHHHHHHHHHCCCcEEEE
Confidence 0000 11123 35677777777764 5899999999999999999998 4444
|
| >d1n45a_ a.132.1.1 (A:) Heme oxygenase-1 (HO-1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: Eukaryotic type heme oxygenase domain: Heme oxygenase-1 (HO-1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.61 E-value=0.0024 Score=58.78 Aligned_cols=195 Identities=12% Similarity=0.077 Sum_probs=116.5
Q ss_pred hHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCHHHHHHHHHHHH
Q 008479 15 GLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECA-----DDDDAKLSISELRK 89 (564)
Q Consensus 15 ~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a-----~~~~~~~~l~~~~~ 89 (564)
+|+++|-+.....-..+-++||++.|.+|+++++.+..||.|=+.+....-+.+....... ..++++.
T Consensus 3 ~ls~~Lr~~T~~~H~~~E~~~~~~~l~~g~~t~~~Y~~~L~~~y~vy~~lE~~l~~~~~~~~~~~~~~~~~~~------- 75 (214)
T d1n45a_ 3 DLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKESPVFAPVYFPEELH------- 75 (214)
T ss_dssp SHHHHHHHHTHHHHHHHHHSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTGGGCCHHHHC-------
T ss_pred cHHHHHHHHHHHHHHHHHcChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCccchhhcChHhhc-------
Confidence 4888888776655555557999999999999999999999998888777776665432221 1111111
Q ss_pred HHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHH
Q 008479 90 GVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (564)
Q Consensus 90 ~i~~E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (564)
+.-.+..++..-.|....+...+.|++..|++++..++..+. ..+++.++.-+-+-..
T Consensus 76 ---R~~~l~~DL~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------------------~~llg~~YV~e~g~~~ 133 (214)
T d1n45a_ 76 ---RKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEP-------------------ELLVAHAYTRYLGDLS 133 (214)
T ss_dssp ---CHHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHHHHCG-------------------GGHHHHHHHHHHHHHH
T ss_pred ---cchhHHHHHHHhcCCchhccCCCChHHHHHHHHHhhhcccCH-------------------HHHHHHHHHHHHHHhh
Confidence 112222233222455555566789999999999988875332 2456666655444444
Q ss_pred HHHHHHh----hccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhc
Q 008479 170 LGKEFHA----LLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFC 241 (564)
Q Consensus 170 i~~~~~~----~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~ 241 (564)
-|+.+.+ ..+ .+.+..-..+...|...+-..+-..+.+.+|++. .++++++++.+-=..+-++=.+.|+
T Consensus 134 GGq~i~~~~~~~l~-l~~~~~~~~f~~~~~~~~~~~~k~~f~~~l~~~~--~~~~~~~~ii~eA~~aF~~~~~lf~ 206 (214)
T d1n45a_ 134 GGQVLKKIAQKALD-LPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLE--MTPAVRQRVIEEAKTAFLLNIQLFE 206 (214)
T ss_dssp HHHHHHHHHHHHHC-CCSCSCSCGGGCCTTCSCHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC-CCCCCCcceeeecCCcccHHHHHHHHHHHHHccc--CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444433 221 1111111223334443334444456888888764 5777777776665555555544444
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.61 E-value=2.4e-05 Score=67.80 Aligned_cols=25 Identities=8% Similarity=-0.072 Sum_probs=22.9
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEcc
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSY 414 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~ 414 (564)
.+.||..++++.++++| +.++++|+
T Consensus 36 ~~~p~v~~~l~~l~~~G---~~Iii~T~ 60 (149)
T d1ltqa1 36 VINPMVVELSKMYALMG---YQIVVVSG 60 (149)
T ss_dssp CBCHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred ccCHHHHHHHHHHHhcc---CeEEEEec
Confidence 56799999999999999 99999997
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=97.59 E-value=3.2e-05 Score=68.83 Aligned_cols=108 Identities=18% Similarity=0.202 Sum_probs=66.7
Q ss_pred cCCCCccHHHHHHHHHHcCCCCCcEEEEccc-------cC-------HHHHHHHHhhcCCCceeEEeeceeecCcccccc
Q 008479 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYC-------WC-------GDLIRASFSSAGLNALNVHANEFSFKESISTGE 450 (564)
Q Consensus 385 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g-------~s-------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~ 450 (564)
.+.+-||..++++.++++| ++++|+|.. ++ ...+...+...|+....|+.......++..
T Consensus 28 ~~~~~pgv~e~L~~L~~~g---~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~--- 101 (161)
T d2fpwa1 28 KLAFEPGVIPQLLKLQKAG---YKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECD--- 101 (161)
T ss_dssp GCCBCTTHHHHHHHHHHTT---EEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCS---
T ss_pred HceECccHHHHHHHHHHcC---CceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeecccccccccc---
Confidence 4678899999999999999 999999952 11 123555666666644444333211111110
Q ss_pred ccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEcCC
Q 008479 451 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS 505 (564)
Q Consensus 451 ~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~~~ 505 (564)
..++. ...+.+++++.+.+ +.+++||||+.+|+.|...|++ +|.+.+.
T Consensus 102 ~~KP~------p~~~~~~~~~~~id-~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~ 150 (161)
T d2fpwa1 102 CRKPK------VKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGLRYDRE 150 (161)
T ss_dssp SSTTS------SGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred ccccc------cHHHHHHHHhcCCC-hhcEEEECCCHHHHHHHHHcCCeEEEECCC
Confidence 01111 13344455555553 5799999999999999999999 6666543
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.57 E-value=2.8e-05 Score=73.94 Aligned_cols=72 Identities=18% Similarity=0.395 Sum_probs=56.0
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHHHhhCCceeecC---chhHHhHH
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLY---PGLVKKQK 531 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~~~~gi~~~p~~---~~~~~~~~ 531 (564)
..+.+|...++.+.+..+.+ ..+++++|||.||++|+..||+||+++ +.+.|++.|. ++--. .|++..++
T Consensus 182 p~~~sK~~al~~l~~~~~i~-~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~-----~vt~~~~~~Gv~~~l~ 255 (260)
T d2rbka1 182 AKGDTKQKGIDEIIRHFGIK-LEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAAD-----YVTAPIDEDGISKAMK 255 (260)
T ss_dssp STTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSS-----EECCCGGGTHHHHHHH
T ss_pred eCCCCHHHHHHHHHHhcccc-HhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCC-----EEeCCCCccHHHHHHH
Confidence 45678999999999988774 479999999999999999999999998 5678888773 44222 35555555
Q ss_pred hh
Q 008479 532 EY 533 (564)
Q Consensus 532 ~~ 533 (564)
.|
T Consensus 256 ~~ 257 (260)
T d2rbka1 256 HF 257 (260)
T ss_dssp HH
T ss_pred Hh
Confidence 44
|
| >d1wzda1 a.132.1.1 (A:7-213) Heme oxygenase HmuO {Corynebacterium diphtheriae [TaxId: 1717]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: Eukaryotic type heme oxygenase domain: Heme oxygenase HmuO species: Corynebacterium diphtheriae [TaxId: 1717]
Probab=97.52 E-value=0.0033 Score=57.43 Aligned_cols=190 Identities=15% Similarity=0.088 Sum_probs=111.2
Q ss_pred hHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-----CHHHHHHHHHHHH
Q 008479 15 GLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECAD-----DDDAKLSISELRK 89 (564)
Q Consensus 15 ~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~-----~~~~~~~l~~~~~ 89 (564)
+|+.+|-+.....-..+=++||+..|..|+++.+.+..||.+=|++....-.++........ +++ .... .
T Consensus 1 ~l~~~Lr~~T~~~H~~~E~~~~~~~l~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~~~~~~~~~~~~~~~~-~~R~----~ 75 (207)
T d1wzda1 1 GLAVELKQSTAQAHEKAEHSTFMSDLLKGRLGVAEFTRLQEQAWLFYTALEQAVDAVRASGFAESLLDPA-LNRA----E 75 (207)
T ss_dssp CHHHHHHHHTHHHHHHHHTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTSCGG-GCCH----H
T ss_pred CHHHHHHHHHHHHHHHHHcChHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhccCHH-Hhhh----h
Confidence 46777777665544455679999999999999999999999999987766665544332211 111 1110 0
Q ss_pred HHHHHHHHHHHHHHHhCCCcc--cccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHH
Q 008479 90 GVLEELKMHDSFVKEWGTDLA--KMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRL 166 (564)
Q Consensus 90 ~i~~E~~~h~~~~~~~gi~~~--~~~~~~pa~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~ 166 (564)
.+. .=++.+|.+.. ...+|.|++..|++++..++. .+ +..+++.++.-+.+
T Consensus 76 ~l~-------~DL~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~-------------------p~~llg~~Yv~e~G 129 (207)
T d1wzda1 76 VLA-------RDLDKLNGSSEWRSRITASPAVIDYVNRLEEIRDNVD-------------------GPALVAHHYVRYLG 129 (207)
T ss_dssp HHH-------HHHHHHHSSSTHHHHCCCCHHHHHHHHHHHHHHHHTC-------------------HHHHHHHHHHHHHH
T ss_pred hHH-------HHHHHHcCCccccccCCCChhHHHHHHHHHHHhccCC-------------------HHHHHHHHHHHHHH
Confidence 111 11233444432 356789999999999998874 33 24556666554444
Q ss_pred HHHHHHHH----HhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhh
Q 008479 167 YAFLGKEF----HALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240 (564)
Q Consensus 167 Y~~i~~~~----~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw 240 (564)
-..-|+.+ .+..+.. +.--.+..++..++-...-..+.+.||++. .++++++++.+-=..+-.+=...|
T Consensus 130 ~~~GGq~i~k~l~~~l~l~---~~~~~fy~f~~~~~~~~~k~~~r~~l~~~~--~~~~~~~~ii~eA~~aF~~~~~if 202 (207)
T d1wzda1 130 DLSGGQVIARMMQRHYGVD---PEALGFYHFEGIAKLKVYKDEYREKLNNLE--LSDEQREHLLKEATDAFVFNHQVF 202 (207)
T ss_dssp HHHHHHHHHHHHHHHHCCC---GGGCGGGCCTTCSCHHHHHHHHHHHHHTCC--CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHcCCC---CCCccccccCCcCCHHHHHHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 43334444 3332211 111223333333344455567788888763 678777777665555554444333
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=97.47 E-value=3.6e-05 Score=73.47 Aligned_cols=55 Identities=22% Similarity=0.306 Sum_probs=47.4
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
.+.+|...++.+++..+.+ ..++++||||.||++|+..+|+||+++ +.+.+++.|
T Consensus 187 ~~~~K~~ai~~l~~~~~i~-~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A 242 (267)
T d1nf2a_ 187 KNVDKGKALRFLRERMNWK-KEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEAS 242 (267)
T ss_dssp TTCCHHHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHC
T ss_pred CCCchhHHHHHHHHhhccC-cccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhC
Confidence 4567999999999988874 478999999999999999999999997 446777766
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=97.46 E-value=4.4e-05 Score=72.61 Aligned_cols=55 Identities=18% Similarity=0.322 Sum_probs=46.9
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
.+.+|...++.+++..+.+ ..+++++|||.||++|+..|++||+++ +.+.|++.+
T Consensus 194 ~~~~K~~al~~l~~~~~i~-~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a 249 (271)
T d1rkqa_ 194 KRVNKGTGVKSLADVLGIK-PEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVA 249 (271)
T ss_dssp TTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHC
T ss_pred CCCCcccccceehhhcccc-hhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhC
Confidence 4568999999999988764 468999999999999999999999997 456777655
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=97.44 E-value=5.3e-05 Score=72.19 Aligned_cols=55 Identities=18% Similarity=0.295 Sum_probs=46.9
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc-CChhHHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 512 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~-~~~~L~~~~ 512 (564)
.+.+|...++.+.+..+.+ ..+++++|||.||++|+..||+||+++ +.+.+++.|
T Consensus 204 ~~~~K~~~l~~l~~~~~i~-~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a 259 (283)
T d2b30a1 204 LGHDKYTGINYLLKHYNIS-NDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHA 259 (283)
T ss_dssp TTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHS
T ss_pred CcchhHHHHHHHhhhcccc-cceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhC
Confidence 4567999999999887764 478999999999999999999999997 456777666
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.35 E-value=6.7e-05 Score=69.71 Aligned_cols=50 Identities=26% Similarity=0.206 Sum_probs=41.0
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEcCC
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 505 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~~~ 505 (564)
..+.+|...++.++...+.....+++++|||.||++|+..||+||++++.
T Consensus 175 ~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na 224 (243)
T d1wzca1 175 HGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSL 224 (243)
T ss_dssp ECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSC
T ss_pred hhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeCCC
Confidence 35678999988888766422347899999999999999999999999844
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.16 E-value=0.00095 Score=59.82 Aligned_cols=107 Identities=13% Similarity=0.167 Sum_probs=63.5
Q ss_pred CCCCccHHHHHHHHHHcCCCCCcEEEEcccc-------CH-------HHHHHHHhhcCCCcee-EEeeceeecCcccccc
Q 008479 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCW-------CG-------DLIRASFSSAGLNALN-VHANEFSFKESISTGE 450 (564)
Q Consensus 386 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~-------s~-------~~I~~~l~~~g~~~~~-I~aN~l~~~~g~~tG~ 450 (564)
+.+-||..++++.++++| +.++|+|.-- +. .++...+...++.... .+|-... +++. +.
T Consensus 26 ~~~~~gv~e~l~~L~~~g---~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p-~~~~--~~ 99 (182)
T d2gmwa1 26 FEFIDGVIDAMRELKKMG---FALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHP-QGSV--EE 99 (182)
T ss_dssp CCBCTTHHHHHHHHHHTT---CEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBT-TCSS--GG
T ss_pred eeECCCHHHHHHHHhhcC---chhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeeccccc-cccc--cc
Confidence 467799999999999999 9999999631 00 1222233333432222 2221111 1110 11
Q ss_pred ccccCCCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCcc
Q 008479 451 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 499 (564)
Q Consensus 451 ~~~~~~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 499 (564)
+...+.+.--+...+...+++.+.+ ..+++|||||.+|+.|...|+++
T Consensus 100 ~~~~~~~rKP~p~m~~~~~~~~~i~-~~~s~mVGDs~~Di~aA~~Ag~~ 147 (182)
T d2gmwa1 100 FRQVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVG 147 (182)
T ss_dssp GBSCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCS
T ss_pred ccccccccCCccccccchhhhcccc-cccccccCCCHHHHHHHHHhCCC
Confidence 1111111112235677777777763 57899999999999999999985
|
| >d1wova1 a.132.1.1 (A:2-250) Heme oxygenase 2 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: Eukaryotic type heme oxygenase domain: Heme oxygenase 2 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.12 E-value=0.0082 Score=56.50 Aligned_cols=200 Identities=15% Similarity=0.150 Sum_probs=111.2
Q ss_pred hHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHH
Q 008479 15 GLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECA-DDDDAKLSISELRKGVLE 93 (564)
Q Consensus 15 ~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a-~~~~~~~~l~~~~~~i~~ 93 (564)
.|+++|-+.....-..+-+++|++.+..|.++.+.+..||.|=|+.-. ++..++.+. .++....+.. ..+.+
T Consensus 2 ~ls~~Lre~T~~~H~~aE~~~f~~~l~~g~~s~~~Y~~~L~~~y~vY~----~LE~~~~~~~~~~~~~~~~~---~~l~R 74 (249)
T d1wova1 2 NLAQKLRYGTQQSHTLAENTAYMKCFLKGIVEREPFRQLLANLYYLYS----ALEAALRQHRDNEIISAIYF---PELNR 74 (249)
T ss_dssp CHHHHHHHHTHHHHHHHHTSHHHHHHHHTCCCHHHHHHHHHHHHHHHH----HHHHHHHHTTTSHHHHHHCC---GGGCC
T ss_pred cHHHHHHHHHHHHHHHHHccHHHHHHHcCCCCHHHHHHHHHHHHHHHH----HHHHHHHhcCCCcccccccC---hhhhc
Confidence 467777776655555567899999999999999999999999886433 333333332 2322111100 01111
Q ss_pred HHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHH----HH
Q 008479 94 ELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY----AF 169 (564)
Q Consensus 94 E~~~h~~~~~~~gi~~~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y----~~ 169 (564)
.-.+-.++..-+|-+......|.|++..|++|+..++..+. ..+++-++-=+.+= ..
T Consensus 75 ~~~l~~DL~~l~g~~~~~~~~~~~at~~Yv~~i~~i~~~~P-------------------~~llah~YvrylGdlsGGQ~ 135 (249)
T d1wova1 75 TDKLAEDLTYYYGPNWQQIIQPTPCAKIYVDRLKTIAASEP-------------------ELLIAHCYTRYLGDLSGGQS 135 (249)
T ss_dssp HHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCG-------------------GGHHHHHHHHHHHHTTHHHH
T ss_pred chhHHHHHHHHcCCCchhcCCCChHHHHHHHHHHHHHhhCH-------------------HHHHHHHHHHHHHHhccchH
Confidence 11222333334565555556789999999999988875332 11223222211111 22
Q ss_pred HHHHHHhhccC-CCCcccccccccccCC-hhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008479 170 LGKEFHALLNA-NEGNHPYTKWIDNYSS-ESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (564)
Q Consensus 170 i~~~~~~~~~~-~~~~~~y~~Wi~~y~s-~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~a 243 (564)
|++.+.+..+. ......|..|=+. .. ..-..+-..+.+.+|.+. +++++++++.+-=..+-++=.+-|++-
T Consensus 136 I~k~l~~~l~l~~~~g~~fy~F~~~-~~~~d~~~fK~~~r~~ld~~~--~~~~~~~~ii~EA~~aF~ln~~lf~eL 208 (249)
T d1wova1 136 LKNIIRSALQLPEGEGTAMYEFDSL-PTPGDRRQFKEIYRDVLNSLP--LDEATINRIVEEANYAFSLNREVMHDL 208 (249)
T ss_dssp HHHHHHHHTTCCTTSSCGGGCCTTC-CSHHHHHHHHHHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhcCCCCCCccceeecCCC-CchhHHHHHHHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334433221 1122233333221 11 123455667778888764 678888888777777777666666654
|
| >d1we1a_ a.132.1.1 (A:) Heme oxygenase-1 (HO-1) {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme oxygenase-like superfamily: Heme oxygenase-like family: Eukaryotic type heme oxygenase domain: Heme oxygenase-1 (HO-1) species: Synechocystis sp. [TaxId: 1143]
Probab=97.11 E-value=0.0046 Score=57.08 Aligned_cols=198 Identities=10% Similarity=0.092 Sum_probs=114.0
Q ss_pred chHHHHHHHHhHHhHHHhhcChHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 008479 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLE 93 (564)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hpFv~~la~GtL~~~~f~~Yl~QD~~YL~~~~r~~~~~~~~a~~~~~~~~l~~~~~~i~~ 93 (564)
++|+.+|-+.....-..+-++||++.|..|.++++.+..||.|=|++.....+++........ .... .+. .+.+
T Consensus 2 ~~l~~~Lr~~T~~~H~~~E~~~~~~~l~~g~~s~~~Y~~~L~~~y~vy~~lE~~l~~~~~~~~-~~~~-~~~----~~~R 75 (222)
T d1we1a_ 2 VNLASQLREGTKKSHSMAENVGFVKCFLKGVVEKNSYRKLVGNLYFVYSAMEEEMAKFKDHPI-LSHI-YFP----ELNR 75 (222)
T ss_dssp CCHHHHHHHHTHHHHHHHHTSHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTSTT-GGGG-CCT----TSCC
T ss_pred ccHHHHHHHHHHHHHHHHHccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-cccc-cCh----hhhh
Confidence 578888888776656666789999999999999999999999988887666665443322110 0000 000 0011
Q ss_pred HHHHHHHHHHHhCCCc-ccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 008479 94 ELKMHDSFVKEWGTDL-AKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGK 172 (564)
Q Consensus 94 E~~~h~~~~~~~gi~~-~~~~~~~pa~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~i~~ 172 (564)
-..++.++. .+|.+. .....|.|++..|++++...+..+. +.+++.++.-+-+-..-|+
T Consensus 76 ~~~l~~DL~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------------------~~llg~~YV~~~g~~~GGq 135 (222)
T d1we1a_ 76 KQSLEQDLQ-FYYGSNWRQEVKISAAGQAYVDRVRQVAATAP-------------------ELLVAHSYTRYLGDLSGGQ 135 (222)
T ss_dssp HHHHHHHHH-HHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCG-------------------GGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HccCccccccCCCChhHHHHHHHHHhhhccCH-------------------HHHHHHHHHHHHHHhhhhH
Confidence 122333332 233332 3456789999999999998885432 3456666654444444444
Q ss_pred HHH----hhccCCCCcccccccccccCChhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhcc
Q 008479 173 EFH----ALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCA 242 (564)
Q Consensus 173 ~~~----~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~F~~~~~lE~~Fw~~ 242 (564)
.+. +..+-. + ... .+..++...+-...=..+.+.+|++. .++++.+++.+-=..+-++=.+.|++
T Consensus 136 ~i~~~~~~~~~l~-~-~~~-~fy~~~~~~~~~~~k~~~~~~l~~~~--~~~~~~~~ii~eA~~aF~~~~~lf~e 204 (222)
T d1we1a_ 136 ILKKIAQNAMNLH-D-GGT-AFYEFADIDDEKAFKNTYRQAMNDLP--IDQATAERIVDEANDAFAMNMKMFNE 204 (222)
T ss_dssp HHHHHHHHHHTCS-S-SSC-GGGCCTTCSSHHHHHHHHHHHHHTCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-C-CCc-cceecCCcccHHHHHHHHHHHHHccC--CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443 322211 1 111 22333333333344456777888764 57777777766656555555555543
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.83 E-value=0.0041 Score=56.00 Aligned_cols=41 Identities=17% Similarity=0.263 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEEc
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 503 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~~ 503 (564)
.+.+...+...+. .+.++++|||+..|+.++..||+ .|.+.
T Consensus 162 p~~f~~~~~~lg~-~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~ 203 (225)
T d2g80a1 162 TQSYANILRDIGA-KASEVLFLSDNPLELDAAAGVGIATGLAS 203 (225)
T ss_dssp HHHHHHHHHHHTC-CGGGEEEEESCHHHHHHHHTTTCEEEEEC
T ss_pred hhHhHHHHHhccc-CchhceeecCCHHHHHHHHHcCCEEEEEe
Confidence 4677777777776 36899999999999999999999 55553
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.31 E-value=0.0011 Score=60.47 Aligned_cols=53 Identities=11% Similarity=0.144 Sum_probs=40.9
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcCCc----cchhhhhhcC-ccEEEcCChhHHHHHH
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSV----GDLLCLLEAD-IGIVIGSSSSLRRVGS 513 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~----~Dl~~l~~Ad-~giv~~~~~~L~~~~~ 513 (564)
.+.+|...|+.+.+. ..+.++++||+. ||++|++.|+ .|+++++.....+.|+
T Consensus 182 ~~vsKg~al~~L~~~----~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~ 239 (244)
T d2fuea1 182 EGWDKRYCLDSLDQD----SFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCR 239 (244)
T ss_dssp TTCSTTHHHHHHTTS----CCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHH
T ss_pred hhccHHHHHHHHhcC----ChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHH
Confidence 466799999988752 357899999975 9999999997 6999985544444444
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.28 E-value=0.0011 Score=60.26 Aligned_cols=42 Identities=17% Similarity=0.191 Sum_probs=35.3
Q ss_pred CCCCchHHHHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCccEEEc
Q 008479 456 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 503 (564)
Q Consensus 456 ~~g~~K~~~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv~~ 503 (564)
..|.+|...++.+... ..++++|||.||+.|+..++.|+.|+
T Consensus 155 p~g~~Kg~al~~l~~~------~~~i~~GDs~ND~~Mf~~~~~~~av~ 196 (229)
T d1u02a_ 155 VPGVNKGSAIRSVRGE------RPAIIAGDDATDEAAFEANDDALTIK 196 (229)
T ss_dssp CTTCCHHHHHHHHHTT------SCEEEEESSHHHHHHHHTTTTSEEEE
T ss_pred cCCCCHHHHHHHHhcc------ccceeecCCCChHHHHhccCCeEEEE
Confidence 3567899999998853 57899999999999999998876664
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.56 E-value=0.0016 Score=59.53 Aligned_cols=54 Identities=15% Similarity=0.209 Sum_probs=39.8
Q ss_pred CCCchHHHHHHHHHHhCCCCCccEEEEcC----CccchhhhhhcC-ccEEEcCChhHHHHHHh
Q 008479 457 SPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEAD-IGIVIGSSSSLRRVGSQ 514 (564)
Q Consensus 457 ~g~~K~~~l~~l~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad-~giv~~~~~~L~~~~~~ 514 (564)
.+.+|...++.++. . ..++++++|| |.||++|++.|+ .|+.+.+.+..++.|+.
T Consensus 182 ~~vsKg~al~~l~~---~-~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~~~~~ 240 (243)
T d2amya1 182 DGWDKRYCLRHVEN---D-GYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICEL 240 (243)
T ss_dssp TTCSGGGGGGGTTT---S-CCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHH
T ss_pred cccCHHHHHHHHhC---C-CcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHHHHHHHHH
Confidence 45678888877753 2 3578999999 779999999998 58888766667776654
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.40 E-value=0.064 Score=48.60 Aligned_cols=93 Identities=16% Similarity=0.204 Sum_probs=56.8
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHH-hhcCCCceeEEeeceeecCccccccccccCCCCCchHH
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASF-SSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 463 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l-~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 463 (564)
..-||+.+|++.++++| +.++.||+=. ..+....-| +..|++... -+.+.+.++. ..-..|..
T Consensus 86 ~p~pga~~fl~~~~~~G---v~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~--~~~vll~~~~---------~~K~~rr~ 151 (209)
T d2b82a1 86 IPKEVARQLIDMHVRRG---DAIFFVTGRSPTKTETVSKTLADNFHIPATN--MNPVIFAGDK---------PGQNTKSQ 151 (209)
T ss_dssp EECHHHHHHHHHHHHHT---CEEEEEECSCCCSSCCHHHHHHHHTTCCTTT--BCCCEECCCC---------TTCCCSHH
T ss_pred CcchhHHHHHHHHHHcC---CeEEEEeCCchhhHHHHHHHHHHHcCCCccc--ccceEeeCCC---------CCchHHHH
Confidence 34589999999999999 9999999732 122233333 335553211 1112221110 11124665
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCccchhhhhhcCc-cEEE
Q 008479 464 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 502 (564)
Q Consensus 464 ~l~~l~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-giv~ 502 (564)
.+++ + .-++++||..+|+..+..|++ ||-+
T Consensus 152 ~Ik~----y-----~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 152 WLQD----K-----NIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp HHHH----T-----TEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred HHHH----c-----CeEEEecCCHHHHhHHHHcCCCceEe
Confidence 5543 2 357899999999999999997 5554
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.24 E-value=0.42 Score=42.49 Aligned_cols=25 Identities=8% Similarity=0.081 Sum_probs=21.9
Q ss_pred CCCccHHHHHHHHHHcCCCCCcEEEEcc
Q 008479 387 SLQDGCTTFFQKVVKNENLNANVHVLSY 414 (564)
Q Consensus 387 ~lr~G~~efl~~l~~~g~~~~~~~IvS~ 414 (564)
.+.||..+.++.+.++| ..++|||-
T Consensus 50 ~l~~~v~~~i~~L~~~g---y~iiIvTN 74 (195)
T d1yj5a1 50 ILYPEIPKKLQELAAEG---YKLVIFTN 74 (195)
T ss_dssp ESCTTHHHHHHHHHHHT---CEEEEEEE
T ss_pred eccCCHHHHHHHHHhCC---cEEEEecC
Confidence 35788899999999999 99999995
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.90 E-value=2 Score=37.28 Aligned_cols=31 Identities=13% Similarity=0.076 Sum_probs=24.3
Q ss_pred hhcCCCCccHHHHHHHHHHcCCCCCcEEEEccc
Q 008479 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYC 415 (564)
Q Consensus 383 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g 415 (564)
.++++.-||+.+.++.|.+.+ ...++|+|+.
T Consensus 70 f~~L~p~~gA~e~l~~L~~~~--~~~v~i~t~~ 100 (195)
T d1q92a_ 70 FFELEPLPGAVEAVKEMASLQ--NTDVFICTSP 100 (195)
T ss_dssp TTTCCBCTTHHHHHHHHHHST--TEEEEEEECC
T ss_pred HhhCCcccCHHHHHHHHhhcc--CccceEEccc
Confidence 346888999999999999865 1467888874
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=82.20 E-value=0.6 Score=42.50 Aligned_cols=41 Identities=22% Similarity=0.349 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCc-cEEEc
Q 008479 462 VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 503 (564)
Q Consensus 462 ~~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-giv~~ 503 (564)
...++..++..+. .++++++||||. +|+.++..||+ .|.+.
T Consensus 179 p~~~~~a~~~lgi-~p~e~v~IGD~~~~DI~~a~~aG~~tilV~ 221 (250)
T d2c4na1 179 PWIIRAALNKMQA-HSEETVIVGDNLRTDILAGFQAGLETILVL 221 (250)
T ss_dssp THHHHHHHHHHTC-CGGGEEEEESCTTTHHHHHHHTTCEEEEES
T ss_pred hhhHhhhhhhhcC-CchheEEecCChHHHHHHHHHCCCCEEEEC
Confidence 4677778887777 468999999995 69999999998 56664
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=81.70 E-value=0.68 Score=42.08 Aligned_cols=43 Identities=16% Similarity=0.374 Sum_probs=33.7
Q ss_pred chHHHHHHHHHHhCCCCCccEEEEcCCc-cchhhhhhcCc-cEEEc
Q 008479 460 DKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 503 (564)
Q Consensus 460 ~K~~~l~~l~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-giv~~ 503 (564)
-+...+...++..+. .+.++++|||+. +|+.|+..||+ .|.|.
T Consensus 181 P~~~~~~~~~~~~gi-~~~~~l~IGD~~~~DI~~a~~aG~~si~V~ 225 (253)
T d1yv9a1 181 PKAIIMERAIAHLGV-EKEQVIMVGDNYETDIQSGIQNGIDSLLVT 225 (253)
T ss_dssp TSHHHHHHHHHHHCS-CGGGEEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred cchhHHHHHHHHhCC-CccceEEecCChHHHHHHHHHCCCCEEEEC
Confidence 345667778887776 358999999995 69999999998 56553
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=80.38 E-value=0.26 Score=44.62 Aligned_cols=17 Identities=29% Similarity=0.342 Sum_probs=14.6
Q ss_pred CCeEEeeccccceeccc
Q 008479 262 DRLIIFSDFDLTCTIVD 278 (564)
Q Consensus 262 ~~~lii~DFD~TiT~~D 278 (564)
++.+|++|+||||+..+
T Consensus 2 ~~~li~~DlDGTL~~~~ 18 (244)
T d1s2oa1 2 RQLLLISDLDNTWVGDQ 18 (244)
T ss_dssp CSEEEEECTBTTTBSCH
T ss_pred CceEEEEECcccCCCCC
Confidence 57899999999999754
|