Citrus Sinensis ID: 008531
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 562 | 2.2.26 [Sep-21-2011] | |||||||
| P13708 | 805 | Sucrose synthase OS=Glyci | yes | no | 1.0 | 0.698 | 0.877 | 0.0 | |
| P31926 | 806 | Sucrose synthase OS=Vicia | N/A | no | 1.0 | 0.697 | 0.868 | 0.0 | |
| Q01390 | 805 | Sucrose synthase OS=Vigna | N/A | no | 1.0 | 0.698 | 0.870 | 0.0 | |
| O65026 | 805 | Sucrose synthase OS=Medic | N/A | no | 1.0 | 0.698 | 0.857 | 0.0 | |
| P49034 | 803 | Sucrose synthase OS=Alnus | N/A | no | 0.994 | 0.696 | 0.854 | 0.0 | |
| Q9LXL5 | 808 | Sucrose synthase 4 OS=Ara | yes | no | 0.998 | 0.694 | 0.841 | 0.0 | |
| P49040 | 808 | Sucrose synthase 1 OS=Ara | no | no | 0.998 | 0.694 | 0.828 | 0.0 | |
| P10691 | 805 | Sucrose synthase OS=Solan | N/A | no | 1.0 | 0.698 | 0.807 | 0.0 | |
| P49039 | 805 | Sucrose synthase OS=Solan | N/A | no | 1.0 | 0.698 | 0.813 | 0.0 | |
| P49037 | 805 | Sucrose synthase OS=Solan | N/A | no | 1.0 | 0.698 | 0.807 | 0.0 |
| >sp|P13708|SUSY_SOYBN Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2 | Back alignment and function desciption |
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Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/562 (87%), Positives = 529/562 (94%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MA LTRVHSLRERLDETL+A+RNEILALLSRIE KGKGILQ+HQ+IAEFE I EENR+
Sbjct: 1 MATDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQ 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
LT+GAFGEVLR+TQEAIVLPPWVALAVRPRPGVWEY+RVNVHALVVEEL AEYLHFKE
Sbjct: 61 KLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEELQPAEYLHFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDG SNGNFVLELDFEPFNA+FPRPTL+KSIGNGV+FLNRHLSAKLFHDKES+HPLLE
Sbjct: 121 ELVDGSSNGNFVLELDFEPFNAAFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLR+H KGK +MLNDRIQN ++LQHVLRKAEEYL TV PETP+SE +FQEIGLERGW
Sbjct: 181 FLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYLGTVPPETPYSEFEHKFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GD AER LE IQLLLDLLEAPDPCTLETFLGRIPMVFNVVIL+PHGYFAQD+VLGYPDTG
Sbjct: 241 GDNAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQVVYILDQVRALE+EML RIKQQGLDI P+ILIITRLLPDAVGTTCGQRLEKV+GT++S
Sbjct: 301 GQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVFGTEHS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
ILRVPFRTEKG+VRKWISRFEVWPYLETYTEDVA E+AKELQGKPDLI+GNYSDGNIVA
Sbjct: 361 HILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYP+SDIYWK L+++YHFSCQFTADL AMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPESDIYWKKLEERYHFSCQFTADLFAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD +IYFP+TE RR
Sbjct: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPHTETSRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL 562
L SFHPEIEELLYS VEN+EH+
Sbjct: 541 LTSFHPEIEELLYSSVENEEHI 562
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Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Glycine max (taxid: 3847) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 3 |
| >sp|P31926|SUSY_VICFA Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1 | Back alignment and function description |
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| >sp|Q01390|SUSY_VIGRR Sucrose synthase OS=Vigna radiata var. radiata GN=SS1 PE=1 SV=1 | Back alignment and function description |
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| >sp|O65026|SUSY_MEDSA Sucrose synthase OS=Medicago sativa PE=2 SV=1 | Back alignment and function description |
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| >sp|P49034|SUSY_ALNGL Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9LXL5|SUS4_ARATH Sucrose synthase 4 OS=Arabidopsis thaliana GN=SUS4 PE=1 SV=1 | Back alignment and function description |
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| >sp|P49040|SUS1_ARATH Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=1 SV=3 | Back alignment and function description |
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| >sp|P10691|SUS1_SOLTU Sucrose synthase OS=Solanum tuberosum PE=2 SV=1 | Back alignment and function description |
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| >sp|P49039|SUS2_SOLTU Sucrose synthase OS=Solanum tuberosum PE=3 SV=1 | Back alignment and function description |
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| >sp|P49037|SUSY_SOLLC Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 562 | ||||||
| 6683114 | 805 | sucrose synthase [Citrus unshiu] | 1.0 | 0.698 | 0.996 | 0.0 | |
| 6682843 | 805 | sucrose synthase [Citrus unshiu] | 1.0 | 0.698 | 0.996 | 0.0 | |
| 324984225 | 805 | sucrose synthase [Gossypium herbaceum su | 1.0 | 0.698 | 0.918 | 0.0 | |
| 345104483 | 805 | sucrose synthase Sus1 [Gossypium musteli | 1.0 | 0.698 | 0.918 | 0.0 | |
| 359357829 | 805 | sucrose synthase 3 [Gossypium arboreum] | 1.0 | 0.698 | 0.916 | 0.0 | |
| 324984229 | 805 | sucrose synthase [Gossypium hirsutum] | 1.0 | 0.698 | 0.916 | 0.0 | |
| 324984221 | 805 | sucrose synthase [Gossypium barbadense] | 1.0 | 0.698 | 0.916 | 0.0 | |
| 345104479 | 805 | sucrose synthase Sus1 [Gossypium schwend | 1.0 | 0.698 | 0.916 | 0.0 | |
| 345104513 | 805 | sucrose synthase Sus1 [Gossypium klotzsc | 1.0 | 0.698 | 0.916 | 0.0 | |
| 345104515 | 805 | sucrose synthase Sus1 [Gossypium aridum] | 1.0 | 0.698 | 0.914 | 0.0 |
| >gi|6683114|dbj|BAA89049.1| sucrose synthase [Citrus unshiu] | Back alignment and taxonomy information |
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Score = 1157 bits (2994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/562 (99%), Positives = 561/562 (99%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK
Sbjct: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK 60
Query: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE
Sbjct: 61 HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE 120
Query: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE
Sbjct: 121 ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE 180
Query: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW 240
FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTV PETPFSELALRFQEIGLERGW
Sbjct: 181 FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVAPETPFSELALRFQEIGLERGW 240
Query: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG
Sbjct: 241 GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300
Query: 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
GQV+YILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS
Sbjct: 301 GQVIYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS 360
Query: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA
Sbjct: 361 DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420
Query: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST
Sbjct: 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480
Query: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR
Sbjct: 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR 540
Query: 541 LKSFHPEIEELLYSDVENKEHL 562
LKSFHPEIEELLYSDVENKEHL
Sbjct: 541 LKSFHPEIEELLYSDVENKEHL 562
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Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6682843|dbj|BAA88905.1| sucrose synthase [Citrus unshiu] | Back alignment and taxonomy information |
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| >gi|324984225|gb|ADY68846.1| sucrose synthase [Gossypium herbaceum subsp. africanum] | Back alignment and taxonomy information |
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| >gi|345104483|gb|AEN71063.1| sucrose synthase Sus1 [Gossypium mustelinum] gi|345104487|gb|AEN71065.1| sucrose synthase Sus1 [Gossypium darwinii] gi|345104495|gb|AEN71069.1| sucrose synthase Sus1 [Gossypium barbadense var. brasiliense] gi|345104499|gb|AEN71071.1| sucrose synthase Sus1 [Gossypium barbadense var. peruvianum] gi|345104503|gb|AEN71073.1| sucrose synthase Sus1 [Gossypium hirsutum subsp. latifolium] | Back alignment and taxonomy information |
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| >gi|359357829|gb|AEV40462.1| sucrose synthase 3 [Gossypium arboreum] gi|392050914|gb|AFM52234.1| putative sucrose synthase 3 [Gossypium arboreum] | Back alignment and taxonomy information |
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| >gi|324984229|gb|ADY68848.1| sucrose synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
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| >gi|324984221|gb|ADY68844.1| sucrose synthase [Gossypium barbadense] | Back alignment and taxonomy information |
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| >gi|345104479|gb|AEN71061.1| sucrose synthase Sus1 [Gossypium schwendimanii] | Back alignment and taxonomy information |
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| >gi|345104513|gb|AEN71078.1| sucrose synthase Sus1 [Gossypium klotzschianum] | Back alignment and taxonomy information |
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| >gi|345104515|gb|AEN71079.1| sucrose synthase Sus1 [Gossypium aridum] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 562 | ||||||
| TAIR|locus:2084756 | 808 | SUS4 "AT3G43190" [Arabidopsis | 0.998 | 0.694 | 0.818 | 1.2e-252 | |
| TAIR|locus:2180489 | 808 | SUS1 "AT5G20830" [Arabidopsis | 0.998 | 0.694 | 0.802 | 3.7e-251 | |
| UNIPROTKB|P31924 | 816 | SUS1 "Sucrose synthase 1" [Ory | 0.994 | 0.685 | 0.732 | 7e-228 | |
| TAIR|locus:2137829 | 809 | SUS3 "AT4G02280" [Arabidopsis | 1.0 | 0.694 | 0.684 | 1.5e-211 | |
| TAIR|locus:2155894 | 807 | SUS2 "sucrose synthase 2" [Ara | 0.987 | 0.687 | 0.667 | 2.1e-203 | |
| TAIR|locus:2206865 | 942 | SUS6 "sucrose synthase 6" [Ara | 0.998 | 0.595 | 0.537 | 3.6e-160 | |
| TAIR|locus:2166203 | 836 | SUS5 "sucrose synthase 5" [Ara | 0.975 | 0.655 | 0.508 | 1.1e-149 | |
| TAIR|locus:2124680 | 1050 | ATSPS4F [Arabidopsis thaliana | 0.421 | 0.225 | 0.25 | 7.7e-06 | |
| TAIR|locus:2010647 | 1062 | SPS3F "sucrose phosphate synth | 0.428 | 0.226 | 0.252 | 1.3e-05 | |
| TAIR|locus:2184891 | 1047 | SPS2F "sucrose phosphate synth | 0.448 | 0.240 | 0.218 | 0.00041 |
| TAIR|locus:2084756 SUS4 "AT3G43190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2416 (855.5 bits), Expect = 1.2e-252, Sum P(2) = 1.2e-252
Identities = 459/561 (81%), Positives = 500/561 (89%)
Query: 2 AERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKH 61
AER +TRVHS RERLD TL A +NE+ ALLSR+E KGKGILQ+HQ+IAEFE++ E +K
Sbjct: 4 AERVITRVHSQRERLDATLVAQKNEVFALLSRVEAKGKGILQHHQIIAEFEAMPLETQKK 63
Query: 62 LTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEE 121
L GAF E LR+ QEAIVLPP+VALAVRPRPGVWEY+RVN+H YL FKEE
Sbjct: 64 LKGGAFFEFLRSAQEAIVLPPFVALAVRPRPGVWEYVRVNLHDLVVEELQASEYLQFKEE 123
Query: 122 LVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEF 181
LVDG NGNF LELDFEPFNA+FPRPTL+K IG+GVEFLNRHLSAKLFHDKES+HPLL+F
Sbjct: 124 LVDGIKNGNFTLELDFEPFNAAFPRPTLNKYIGDGVEFLNRHLSAKLFHDKESLHPLLKF 183
Query: 182 LRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWG 241
LR+H H+GK +MLN+RIQNLN+LQH LRKAEEYL + PET +SE +FQEIGLERGWG
Sbjct: 184 LRLHSHEGKTLMLNNRIQNLNTLQHNLRKAEEYLMELKPETLYSEFEHKFQEIGLERGWG 243
Query: 242 DTAERALEMIQXXXXXXEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGG 301
DTAER L MI+ EAPDPCTLE FLGRIPMVFNVVIL+PHGYFAQD+VLGYPDTGG
Sbjct: 244 DTAERVLNMIRLLLDLLEAPDPCTLENFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGG 303
Query: 302 QVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSD 361
QVVYILDQVRALE EML RIKQQGL+ITP+ILIITRLLPDA GTTCGQRLEKVYG++Y D
Sbjct: 304 QVVYILDQVRALETEMLQRIKQQGLNITPRILIITRLLPDAAGTTCGQRLEKVYGSQYCD 363
Query: 362 ILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVAS 421
ILRVPFRTEKG+VRKWISRFEVWPYLET+TEDVA EI+KELQGKPDLIIGNYSDGN+VAS
Sbjct: 364 ILRVPFRTEKGIVRKWISRFEVWPYLETFTEDVAAEISKELQGKPDLIIGNYSDGNLVAS 423
Query: 422 LLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481
LLAHKLGVTQCTIAHALEKTKYPDSDIYWK LD+KYHFSCQFTADLIAMNHTDFIITSTF
Sbjct: 424 LLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDEKYHFSCQFTADLIAMNHTDFIITSTF 483
Query: 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL 541
QEIAGSKDTVGQYESH +FTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYF YTEEKRRL
Sbjct: 484 QEIAGSKDTVGQYESHRSFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFAYTEEKRRL 543
Query: 542 KSFHPEIEELLYSDVENKEHL 562
+FH EIEELLYSDVEN+EHL
Sbjct: 544 TAFHLEIEELLYSDVENEEHL 564
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| TAIR|locus:2180489 SUS1 "AT5G20830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P31924 SUS1 "Sucrose synthase 1" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2137829 SUS3 "AT4G02280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2155894 SUS2 "sucrose synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2206865 SUS6 "sucrose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2166203 SUS5 "sucrose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2124680 ATSPS4F [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2010647 SPS3F "sucrose phosphate synthase 3F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2184891 SPS2F "sucrose phosphate synthase 2F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q42652 | SUSY_BETVU | 2, ., 4, ., 1, ., 1, 3 | 0.7193 | 0.8985 | 0.6592 | N/A | no |
| O49845 | SUS2_DAUCA | 2, ., 4, ., 1, ., 1, 3 | 0.7409 | 0.9822 | 0.6891 | N/A | no |
| Q01390 | SUSY_VIGRR | 2, ., 4, ., 1, ., 1, 3 | 0.8701 | 1.0 | 0.6981 | N/A | no |
| P04712 | SUS1_MAIZE | 2, ., 4, ., 1, ., 1, 3 | 0.7697 | 0.9857 | 0.6907 | N/A | no |
| P10691 | SUS1_SOLTU | 2, ., 4, ., 1, ., 1, 3 | 0.8078 | 1.0 | 0.6981 | N/A | no |
| P31926 | SUSY_VICFA | 2, ., 4, ., 1, ., 1, 3 | 0.8683 | 1.0 | 0.6972 | N/A | no |
| P31923 | SUS2_HORVU | 2, ., 4, ., 1, ., 1, 3 | 0.7486 | 0.9964 | 0.6862 | N/A | no |
| P31922 | SUS1_HORVU | 2, ., 4, ., 1, ., 1, 3 | 0.7553 | 0.9839 | 0.6852 | N/A | no |
| O65026 | SUSY_MEDSA | 2, ., 4, ., 1, ., 1, 3 | 0.8576 | 1.0 | 0.6981 | N/A | no |
| Q41607 | SUS2_TULGE | 2, ., 4, ., 1, ., 1, 3 | 0.7651 | 0.9982 | 0.6841 | N/A | no |
| Q41608 | SUS1_TULGE | 2, ., 4, ., 1, ., 1, 3 | 0.7508 | 0.9946 | 0.6944 | N/A | no |
| P49039 | SUS2_SOLTU | 2, ., 4, ., 1, ., 1, 3 | 0.8131 | 1.0 | 0.6981 | N/A | no |
| P49034 | SUSY_ALNGL | 2, ., 4, ., 1, ., 1, 3 | 0.8540 | 0.9946 | 0.6961 | N/A | no |
| P49035 | SUS1_DAUCA | 2, ., 4, ., 1, ., 1, 3 | 0.7765 | 1.0 | 0.6955 | N/A | no |
| P49036 | SUS2_MAIZE | 2, ., 4, ., 1, ., 1, 3 | 0.7647 | 0.9964 | 0.6862 | N/A | no |
| P49037 | SUSY_SOLLC | 2, ., 4, ., 1, ., 1, 3 | 0.8078 | 1.0 | 0.6981 | N/A | no |
| O24301 | SUS2_PEA | 2, ., 4, ., 1, ., 1, 3 | 0.7012 | 0.9911 | 0.6885 | N/A | no |
| Q9LXL5 | SUS4_ARATH | 2, ., 4, ., 1, ., 1, 3 | 0.8413 | 0.9982 | 0.6943 | yes | no |
| P30298 | SUS2_ORYSJ | 2, ., 4, ., 1, ., 1, 3 | 0.7697 | 0.9857 | 0.6856 | yes | no |
| P13708 | SUSY_SOYBN | 2, ., 4, ., 1, ., 1, 3 | 0.8772 | 1.0 | 0.6981 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.976 |
| 3rd Layer | 2.4.1.13 | 0.991 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 562 | |||
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 0.0 | |
| pfam00862 | 550 | pfam00862, Sucrose_synth, Sucrose synthase | 0.0 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 0.0 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 7e-52 | |
| TIGR02472 | 439 | TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas | 6e-19 | |
| TIGR02468 | 1050 | TIGR02468, sucrsPsyn_pln, sucrose phosphate syntha | 4e-05 | |
| smart00893 | 185 | smart00893, ETF, Electron transfer flavoprotein do | 0.004 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 1185 bits (3067), Expect = 0.0
Identities = 443/564 (78%), Positives = 490/564 (86%), Gaps = 2/564 (0%)
Query: 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESI--SEEN 58
A LTR HS+RER+ + LS HRNE+ ALLSR +GKGILQ HQLI E E++ +E
Sbjct: 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEE 61
Query: 59 RKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHF 118
RK L +G FG++LR+TQEAIVLPP+VALAVRPRPGVWEY+RVNV L VEEL V+EYL F
Sbjct: 62 RKKLLDGPFGDILRSTQEAIVLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKF 121
Query: 119 KEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPL 178
KEELVDG N NFVLELDFEPFNASFPRPTLS SIGNGV+FLNRHLS+KLF DKES+ PL
Sbjct: 122 KEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQFLNRHLSSKLFRDKESLEPL 181
Query: 179 LEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLER 238
L+FLR H HKG+ +MLNDRIQ L+ LQ LRKAEEYL+ + +TP+SE RFQE+GLE+
Sbjct: 182 LDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEK 241
Query: 239 GWGDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPD 298
GWGDTAER LE I LLLDLL+APDP TLE FLGRIPMVFNVVI +PHGYF Q +VLG PD
Sbjct: 242 GWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPD 301
Query: 299 TGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTK 358
TGGQVVYILDQVRALE+EMLLRIKQQGLDI PQILI+TRL+PDA GTTC QRLEKV GT+
Sbjct: 302 TGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTE 361
Query: 359 YSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNI 418
+S ILRVPFRTEKG++RKWISRF+VWPYLET+ ED A EI ELQGKPDLIIGNYSDGN+
Sbjct: 362 HSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNL 421
Query: 419 VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478
VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWK DDKYHFSCQFTADLIAMNH DFIIT
Sbjct: 422 VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481
Query: 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEK 538
ST+QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTE++
Sbjct: 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQ 541
Query: 539 RRLKSFHPEIEELLYSDVENKEHL 562
+RL S HP IEELLYS +N EH+
Sbjct: 542 KRLTSLHPSIEELLYSPEQNDEHI 565
|
Length = 815 |
| >gnl|CDD|109900 pfam00862, Sucrose_synth, Sucrose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
| >gnl|CDD|233879 TIGR02468, sucrsPsyn_pln, sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
| >gnl|CDD|214890 smart00893, ETF, Electron transfer flavoprotein domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 562 | |||
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.95 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.82 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.77 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.76 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.72 | |
| PLN02316 | 1036 | synthase/transferase | 99.7 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.64 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.63 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.62 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.55 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.55 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.49 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.45 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.45 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.41 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.41 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.4 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.34 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 99.3 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.26 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.26 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.17 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.17 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.16 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.12 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.1 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.06 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.05 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.05 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.04 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.01 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 99.01 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 98.97 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 98.97 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 98.94 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.94 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 98.9 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 98.9 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 98.89 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 98.88 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 98.88 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 98.88 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 98.87 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 98.86 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 98.85 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.85 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 98.79 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 98.78 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 98.77 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 98.77 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 98.72 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 98.72 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 98.72 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 98.7 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 98.66 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.65 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 98.65 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.63 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 98.62 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.6 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 98.58 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 98.35 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 98.29 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 98.11 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 98.08 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 97.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 97.75 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 97.55 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 97.53 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 97.46 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 97.35 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 97.25 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 97.13 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 96.96 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 96.89 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 96.81 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 96.4 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 96.37 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 96.35 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 96.35 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 96.3 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 96.25 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 96.24 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 96.18 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 95.52 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 95.49 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 95.18 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 94.73 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 94.7 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 94.55 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 94.16 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 92.93 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 92.63 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 92.38 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 90.76 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 90.61 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 90.33 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 87.43 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 85.26 | |
| PLN02208 | 442 | glycosyltransferase family protein | 83.84 | |
| PLN00414 | 446 | glycosyltransferase family protein | 83.38 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 81.0 |
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-195 Score=1542.36 Aligned_cols=548 Identities=72% Similarity=1.186 Sum_probs=472.5
Q ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHHHhcCCCccchhHHHHHHHhhhHhhhc--cccCCcHHHHHhhcceeeEcCCeE
Q 008531 7 TRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK--HLTEGAFGEVLRATQEAIVLPPWV 84 (562)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~qe~~~~~~~~ 84 (562)
||++||+|+|+++|++||++|++||+||+++||+|||||||+++|+++++++++ +..+|+||++|++||||||.||||
T Consensus 1 tr~~s~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v 80 (550)
T PF00862_consen 1 TRSHSIRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWV 80 (550)
T ss_dssp -------GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEE
T ss_pred CcchhHHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeE
Confidence 699999999999999999999999999999999999999999999999876655 557899999999999999999999
Q ss_pred EEEEcCCCceEEEEEEecCcceeeecCHHHHhhhcccccCCCCCCCCeeeeecccccCCCCCCCCCCCCCchhhhhhHhh
Q 008531 85 ALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHL 164 (562)
Q Consensus 85 ~~~~r~~~~~~~~~r~~~~~l~~~~~~~~~~l~~ke~~v~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~flnr~l 164 (562)
|||||||||+|||||||+++|+||+|||+|||+|||+|||++++++++|||||+|||++||+|++||||||||+||||||
T Consensus 81 ~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~L 160 (550)
T PF00862_consen 81 ALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGSANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHL 160 (550)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHH
T ss_pred EEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCchhHHHHHhhcccCCeeeeccccCCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHHhhcCCccccCCcH
Q 008531 165 SAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTA 244 (562)
Q Consensus 165 ss~~~~~~~~~~~l~~fl~~~~~~g~~lm~n~~i~~~~~l~~~l~~a~~~l~~~~~~~p~~~~~~~~~~~g~e~gwg~~a 244 (562)
|||||+|++++++||||||+|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||
T Consensus 161 Ssklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta 240 (550)
T PF00862_consen 161 SSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTA 240 (550)
T ss_dssp HHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBH
T ss_pred HHHhcCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcCchhHHhcCCCccceEEEEcCCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC
Q 008531 245 ERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQ 324 (562)
Q Consensus 245 ~rv~e~~~~l~~~l~ap~p~~le~f~~r~pm~~rIliiS~Hg~f~~~~vlG~pDtGGqvvYVldlarALe~~l~~~l~~~ 324 (562)
+||+|||+||+||||||||++||+||+||||+|+|+++||||||+|.+++|+||||||||||+||||||+++|..+|+++
T Consensus 241 ~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~ 320 (550)
T PF00862_consen 241 ERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQ 320 (550)
T ss_dssp HHHHHHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCeEEEEecCCCCCCCCcccccceeecCCCCcEEEEecCCCCCcccccccCccCchHHHHHHHHHHHHHHHHHcCC
Q 008531 325 GLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQG 404 (562)
Q Consensus 325 Gh~~~~~V~V~TR~~~~~~gt~~~q~~E~i~~~~gv~I~RVP~~~~~~~~~~~isr~~l~pyLe~fa~~~~~~i~~~~~~ 404 (562)
|+++.|+|+|+||++|++.||+|++++|++.+++|++|+||||++.+|++++|+|||++||||++|++++.+++.+++++
T Consensus 321 gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~ 400 (550)
T PF00862_consen 321 GLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQG 400 (550)
T ss_dssp T-----EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred CCCEEEecCcChHHHHHHHHHhcCCcEEEEecCCCcCcCCCCcchhcccCcccccchhHHHHHHHHhhCCEEEecCHHHH
Q 008531 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (562)
Q Consensus 405 ~PDLIHaHywdsGlVA~lLArklgVP~V~T~HSLe~~Ky~~s~~~w~~~e~~y~~s~rf~aE~~amn~AD~IIaSS~qEi 484 (562)
+||+|||||+|||+||++||+++|||+|+|+||||++||..++.+|++++.+|||||||+||.++||+||+|||||+|||
T Consensus 401 ~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI 480 (550)
T PF00862_consen 401 KPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEI 480 (550)
T ss_dssp --SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHH
T ss_pred CCcEEEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccccccccccccCCceeeecccccCCCceEEecCCCccCCccCCChhhhccCCChHHHHHhccC
Q 008531 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYS 554 (562)
Q Consensus 485 ~~~~~~l~qyes~~~ft~p~Lyr~v~gi~v~dpKi~VIPpGVD~e~F~P~~~~e~R~~~~~~~ie~ll~~ 554 (562)
+|+++++|||+||+|||||||||||+||++|+|||||||||+|.++|||++++++|++++|++||+||||
T Consensus 481 ~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 481 AGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp HB-SSSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred cCCccccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997
|
4.1.13 from EC in the following reaction: |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 562 | ||||
| 3s28_A | 816 | The Crystal Structure Of Sucrose Synthase-1 In Comp | 0.0 | ||
| 3s27_A | 816 | The Crystal Structure Of Sucrose Synthase-1 From Ar | 0.0 | ||
| 2r60_A | 499 | Structure Of Apo Sucrose Phosphate Synthase (Sps) O | 4e-16 |
| >pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816 | Back alignment and structure |
|
| >pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. Length = 816 | Back alignment and structure |
| >pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii Length = 499 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 754 bits (1947), Expect = 0.0
Identities = 465/561 (82%), Positives = 514/561 (91%)
Query: 2 AERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKH 61
AER +TRVHS RERL+ETL + RNE+LALLSR+E KGKGILQ +Q+IAEFE++ E+ RK
Sbjct: 4 AERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKK 63
Query: 62 LTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEE 121
L G F ++L++TQEAIVLPPWVALAVRPRPGVWEY+RVN+HALVVEEL AE+LHFKEE
Sbjct: 64 LEGGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEE 123
Query: 122 LVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEF 181
LVDG NGNF LELDFEPFNAS PRPTL K IGNGV+FLNRHLSAKLFHDKES+ PLL+F
Sbjct: 124 LVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFHDKESLLPLLKF 183
Query: 182 LRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWG 241
LR+H H+GKN+ML+++IQNLN+LQH LRKAEEYL + ET + E +F+EIGLERGWG
Sbjct: 184 LRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWG 243
Query: 242 DTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGG 301
D AER L+MI+LLLDLLEAPDPCTLETFLGR+PMVFNVVIL+PHGYFAQD+VLGYPDTGG
Sbjct: 244 DNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGG 303
Query: 302 QVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSD 361
QVVYILDQVRALE EML RIKQQGL+I P+ILI+TRLLPDAVGTTCG+RLE+VY ++Y D
Sbjct: 304 QVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCD 363
Query: 362 ILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVAS 421
ILRVPFRTEKG+VRKWISRFEVWPYLETYTED AVE++KEL GKPDLIIGNYSDGN+VAS
Sbjct: 364 ILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVAS 423
Query: 422 LLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481
LLAHKLGVTQCTIAHALEKTKYPDSDIYWK LDDKYHFSCQFTAD+ AMNHTDFIITSTF
Sbjct: 424 LLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTF 483
Query: 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL 541
QEIAGSK+TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL
Sbjct: 484 QEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL 543
Query: 542 KSFHPEIEELLYSDVENKEHL 562
FH EIEELLYSDVENKEHL
Sbjct: 544 TKFHSEIEELLYSDVENKEHL 564
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 562 | |||
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.81 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.73 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.71 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.53 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.49 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.49 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.33 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.32 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.25 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.21 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.01 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.01 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 98.96 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 98.81 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 98.77 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 98.65 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 98.55 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 98.43 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 98.41 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 98.32 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 97.96 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 97.95 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 97.88 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 97.83 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 97.79 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 97.7 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 97.58 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 97.52 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 97.47 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 97.43 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 96.92 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 96.77 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 96.7 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 96.7 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 96.59 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 96.58 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 96.51 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 96.2 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 96.07 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 92.76 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 92.31 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 91.83 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 91.6 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 91.35 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 90.15 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 85.44 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 85.36 |
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-153 Score=1298.48 Aligned_cols=558 Identities=83% Similarity=1.324 Sum_probs=519.0
Q ss_pred ccccccccchHHHHHHHHHHhHHHHHHHHHHHHhcCCCccchhHHHHHHHhhhHhhhccccCCcHHHHHhhcceeeEcCC
Q 008531 3 ERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPP 82 (562)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~ 82 (562)
+++|+|++||+|+++++|++||++|++||++|+++||++|++|||+++|++++++++.++.+|+||++|++||||||.||
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (816)
T 3s28_A 5 ERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKKLEGGPFFDLLKSTQEAIVLPP 84 (816)
T ss_dssp ----------------------CTTHHHHHHHHHHHTCSEEEEHHHHHHTTTTTSCGGGCCCSTHHHHHHTEEEEEECSS
T ss_pred ccccccchhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHhhhcccccCcHHHHHHhhhheeecCC
Confidence 37999999999999999999999999999999999999999999999999999888889999999999999999999999
Q ss_pred eEEEEEcCCCceEEEEEEecCcceeeecCHHHHhhhcccccCCCCCCCCeeeeecccccCCCCCCCCCCCCCchhhhhhH
Q 008531 83 WVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNR 162 (562)
Q Consensus 83 ~~~~~~r~~~~~~~~~r~~~~~l~~~~~~~~~~l~~ke~~v~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~flnr 162 (562)
|||||||||||+|||||||++||+||+|||+|||+|||+|||++.+++++||+||+|||++||++++|+||||||+||||
T Consensus 85 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (816)
T 3s28_A 85 WVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEELVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNR 164 (816)
T ss_dssp EEEEEEEEETTEEEEEEEETTSSCEEEECHHHHHHHHHHHHHSSCCCTTSCEEECGGGGTTSCCCCCGGGTTBHHHHHHH
T ss_pred eEEEEEcCCCcceEEEEEEhhhCceeeecHHHHHHhHHHhcCCCCCCCCceEEeccccccCCCCCCCcccccCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCchhHHHHHhhcccCCeeeeccccCCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHHhhcCCccccCC
Q 008531 163 HLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGD 242 (562)
Q Consensus 163 ~lss~~~~~~~~~~~l~~fl~~~~~~g~~lm~n~~i~~~~~l~~~l~~a~~~l~~~~~~~p~~~~~~~~~~~g~e~gwg~ 242 (562)
|||||||+|++++++||+||+.|+|+|++|||||||+|+++|++||++|++||+++|+||||++|+++||+|||||||||
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (816)
T 3s28_A 165 HLSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGD 244 (816)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHCEETTEEBSBCTTCCSHHHHHHHHHHHHHHHHHSCTTCBHHHHHHHHHHTTBCBCSCS
T ss_pred HHHhhhcCChhhhHHHHHHHHHcccCCeeeeccCCcCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhhcCCCcCchhHHhcCCCccceEEEEcCCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHH
Q 008531 243 TAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIK 322 (562)
Q Consensus 243 ~a~rv~e~~~~l~~~l~ap~p~~le~f~~r~pm~~rIliiS~Hg~f~~~~vlG~pDtGGqvvYVldlarALe~~l~~~l~ 322 (562)
||+||+|||+||+|+||||||++||+||+|+||+|||+|||+||||+|.+++|+||||||++||+||||||+++|+++|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~ 324 (816)
T 3s28_A 245 NAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIK 324 (816)
T ss_dssp BHHHHHHHHHHHHHHHHSCCHHHHHHHHHHSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhcCCCcccHHHHhccCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCeEEEEecCCCCCCCCcccccceeecCCCCcEEEEecCCCCCcccccccCccCchHHHHHHHHHHHHHHHHHc
Q 008531 323 QQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKEL 402 (562)
Q Consensus 323 ~~Gh~~~~~V~V~TR~~~~~~gt~~~q~~E~i~~~~gv~I~RVP~~~~~~~~~~~isr~~l~pyLe~fa~~~~~~i~~~~ 402 (562)
++||+++|+|+|+||.++++.|+.|+++.|.+.+++|++|+|||+++.++++++|++|+.+|+|+..|+.++.+.+.++.
T Consensus 325 ~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~ 404 (816)
T 3s28_A 325 QQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKEL 404 (816)
T ss_dssp HTTCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHC
T ss_pred HCCCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999888999999999999888889999999999999999988888887766
Q ss_pred CCCCCEEEecCcChHHHHHHHHHhcCCcEEEEecCCCcCcCCCCcchhcccCcccccchhHHHHHHHHhhCCEEEecCHH
Q 008531 403 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (562)
Q Consensus 403 ~~~PDLIHaHywdsGlVA~lLArklgVP~V~T~HSLe~~Ky~~s~~~w~~~e~~y~~s~rf~aE~~amn~AD~IIaSS~q 482 (562)
+++|||||+|||++|++|.++++++|||+|+|+|+++..++..++.+|+.....|++++++.+|+.+++.||+|||+|.+
T Consensus 405 ~~~PDVIHsH~~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~ 484 (816)
T 3s28_A 405 NGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQ 484 (816)
T ss_dssp SSCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHH
T ss_pred CCCCeEEEeCCchHHHHHHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHH
Confidence 77999999999999999999999999999999999998888777888888877899999999999999999999999999
Q ss_pred HHhcccccccccccccccccCCceeeecccccCCCceEEecCCCccCCccCCChhhhccCCChHHHHHhccCCCCCCC
Q 008531 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (562)
Q Consensus 483 Ei~~~~~~l~qyes~~~ft~p~Lyr~v~gi~v~dpKi~VIPpGVD~e~F~P~~~~e~R~~~~~~~ie~ll~~~~~~~~ 560 (562)
++++..+.+++|+++.+|++|+|||+++||+++++|+.|||||||.+.|.|......|...++..+++++|++.+..+
T Consensus 485 ~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~ 562 (816)
T 3s28_A 485 EIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKE 562 (816)
T ss_dssp HHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTT
T ss_pred HHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHH
Confidence 998777788999999999999999999999999999999999999999999998888999999999999999876543
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 562 | |||
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.68 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.48 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 98.52 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 97.28 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 95.57 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 95.42 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 94.33 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 94.07 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 93.61 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 88.38 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 86.85 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 86.15 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 85.57 | |
| d1j9ja_ | 247 | SurE homolog TM1662 {Thermotoga maritima [TaxId: 2 | 81.98 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.68 E-value=3.2e-16 Score=155.82 Aligned_cols=207 Identities=16% Similarity=0.162 Sum_probs=126.8
Q ss_pred ceEEEEcCCCCCCCCCCCCCCC-CCCchhhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCCCCCCCcccccceee-
Q 008531 277 FNVVILTPHGYFAQDDVLGYPD-TGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV- 354 (562)
Q Consensus 277 ~rIliiS~Hg~f~~~~vlG~pD-tGGqvvYVldlarALe~~l~~~l~~~Gh~~~~~V~V~TR~~~~~~gt~~~q~~E~i- 354 (562)
|||+++|.... |. +||+..|+.+|+++|++ +|| +|.|+|+..+.... +....+
T Consensus 1 MkIl~~~~~~p---------P~~~GG~~~~~~~La~~L~~--------~Gh----~V~Vvtp~~~~~~~----~~~~~~~ 55 (437)
T d2bisa1 1 MKVLLLGFEFL---------PVKVGGLAEALTAISEALAS--------LGH----EVLVFTPSHGRFQG----EEIGKIR 55 (437)
T ss_dssp CEEEEECSCCT---------TCCSSSHHHHHHHHHHHHHH--------TTC----EEEEEEECTTSSCC----EEEEEEE
T ss_pred CEEEEECCccC---------CcccCCHHHHHHHHHHHHHH--------cCC----EEEEEecCCCccch----hhcccee
Confidence 89999997642 33 79999999999888887 899 99999965433210 000000
Q ss_pred ------------cCCCCcEEEEecCCCCCc---ccccccCccCchHHHHHHHHHHHHHHHHH--cCCCCCEEEecCcChH
Q 008531 355 ------------YGTKYSDILRVPFRTEKG---VVRKWISRFEVWPYLETYTEDVAVEIAKE--LQGKPDLIIGNYSDGN 417 (562)
Q Consensus 355 ------------~~~~gv~I~RVP~~~~~~---~~~~~isr~~l~pyLe~fa~~~~~~i~~~--~~~~PDLIHaHywdsG 417 (562)
....++++++++..-... +.+.| ...+.....|.......+... ....||+||+|+|..+
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~ 132 (437)
T d2bisa1 56 VFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGW---DGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTV 132 (437)
T ss_dssp CSSSEEEEEEEEEEETTEEEEEEESSGGGCSCTTCSHH---HHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGH
T ss_pred ecccccceeeeeeccCCeEEEecCccccccccccccch---hhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhh
Confidence 112357777765432110 01110 111112222333222222111 2457999999999999
Q ss_pred HHHHHHHHhcCCcEEEEecCCCcCcCCCCcchhcc-cCcccccchhHHHHHHHHhhCCEEEecCHHHHhccccccccccc
Q 008531 418 IVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKN-LDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYES 496 (562)
Q Consensus 418 lVA~lLArklgVP~V~T~HSLe~~Ky~~s~~~w~~-~e~~y~~s~rf~aE~~amn~AD~IIaSS~qEi~~~~~~l~qyes 496 (562)
++|..+++..++|+|+|.|+........ ..+.. .........++..+....+.||.|++++.....+ ....+
T Consensus 133 ~~~~~~~~~~~~~~v~~~h~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~---~~~~~-- 205 (437)
T d2bisa1 133 FAGALIKKYFKIPAVFTIHRLNKSKLPA--FYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLID---EWGFF-- 205 (437)
T ss_dssp HHHHHHHHHHCCCEEEEESSCCCCCEEH--HHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHHH---THHHH--
T ss_pred hHhhhhhccccCceeEEEeeccccccch--hhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhhh---hhhhh--
Confidence 9999999999999999999976543211 01100 0000111223446778899999999999876541 22222
Q ss_pred ccccccCCceeeecccccCCCceEEecCCCccCCccCC
Q 008531 497 HTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPY 534 (562)
Q Consensus 497 ~~~ft~p~Lyr~v~gi~v~dpKi~VIPpGVD~e~F~P~ 534 (562)
..+..|+.|||||+|.+.|.|.
T Consensus 206 ----------------~~~~~ki~vi~~g~d~~~~~~~ 227 (437)
T d2bisa1 206 ----------------RNFEGKITYVFNGIDCSFWNES 227 (437)
T ss_dssp ----------------GGGTTTEEECCCCCCTTTSCGG
T ss_pred ----------------ccccCceEEEeccccccccccc
Confidence 2245699999999999999874
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|