Citrus Sinensis ID: 008544
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 562 | 2.2.26 [Sep-21-2011] | |||||||
| Q6DW73 | 463 | Digalactosyldiacylglycero | N/A | no | 0.809 | 0.982 | 0.734 | 0.0 | |
| Q6DW75 | 463 | Digalactosyldiacylglycero | yes | no | 0.814 | 0.989 | 0.721 | 0.0 | |
| Q8W1S1 | 473 | Digalactosyldiacylglycero | yes | no | 0.818 | 0.972 | 0.7 | 0.0 | |
| Q6DW76 | 783 | Digalactosyldiacylglycero | no | no | 0.809 | 0.581 | 0.545 | 1e-155 | |
| Q9S7D1 | 808 | Digalactosyldiacylglycero | no | no | 0.827 | 0.575 | 0.538 | 1e-153 | |
| Q6DW74 | 786 | Digalactosyldiacylglycero | N/A | no | 0.807 | 0.577 | 0.541 | 1e-152 |
| >sp|Q6DW73|DGDG2_LOTJA Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Lotus japonicus GN=DGD2 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/456 (73%), Positives = 392/456 (85%), Gaps = 1/456 (0%)
Query: 48 KQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITF 107
K+QHIAIFTTASLPWLTGTAVNPLFRAAYL+KDGER VTLVIPWLSL Q VYP NITF
Sbjct: 3 KKQHIAIFTTASLPWLTGTAVNPLFRAAYLSKDGERDVTLVIPWLSLKDQALVYPNNITF 62
Query: 108 ASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVL 167
ASP E E Y+R WLE+R GFTS F +FYPGKF+ DK+SILAVGDI+E+IPD+EADIAVL
Sbjct: 63 ASPSEHEKYIRQWLEERVGFTSGFSIKFYPGKFSRDKRSILAVGDISEVIPDKEADIAVL 122
Query: 168 EEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCH 227
EEPEHLTWFHHGKRWK KFR V+GI+HTNYLEYVKREKN ++QAFLL+++N+W+ ++CH
Sbjct: 123 EEPEHLTWFHHGKRWKTKFRLVIGIIHTNYLEYVKREKNGQMQAFLLKYLNNWVVGIYCH 182
Query: 228 KVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKG 287
KVIRLSAATQ+Y SIVCNVHGVNPKFLEIG+KK EQQQNG++AFTKGAY+IG+MVWSKG
Sbjct: 183 KVIRLSAATQDYSGSIVCNVHGVNPKFLEIGKKKREQQQNGDQAFTKGAYFIGKMVWSKG 242
Query: 288 YEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYK 347
Y+ELL L + KEL+ LE+DL+G+GED D++Q+AAKKL++ VRV+P RDHAD +FHDYK
Sbjct: 243 YKELLHLFKNHQKELSALEVDLFGSGEDSDEVQKAAKKLEMAVRVHPARDHADALFHDYK 302
Query: 348 VFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALA 407
+FLNPSTTDVVCT TAEALAMGKIVVCANH SN+FFKQFPNC T+D GFV+ LKALA
Sbjct: 303 LFLNPSTTDVVCTTTAEALAMGKIVVCANHCSNEFFKQFPNCWTFDESKGFVQLILKALA 362
Query: 408 EEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRIIEDAF 467
EEPAQ TDAQ H LSWE+ATERFL+ AEL K S+S S ++ S SLN ++ ++DA
Sbjct: 363 EEPAQLTDAQRHDLSWEAATERFLKAAELDKPFEKKLSRSTSIYM-STSLNLQQTVDDAS 421
Query: 468 GYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGL 503
Y+H+VASGFE SRR GAIPGSL+PDE+L KELGL
Sbjct: 422 AYVHHVASGFEISRRMFGAIPGSLKPDEELSKELGL 457
|
Involved in the synthesis of diacylglycerol galactolipids that are specifically found in thylakoid membranes. Specific for alpha-glycosidic linkages. Lotus japonicus (taxid: 34305) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 4EC: 1 |
| >sp|Q6DW75|DGDG2_SOYBN Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Glycine max GN=DGD2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/460 (72%), Positives = 391/460 (85%), Gaps = 2/460 (0%)
Query: 45 MDRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGN 104
MD+K+ HIAIFTTASLPWLTGTAVNPLFRAAYLAK GER VTLVIPWLSL Q+ VYP N
Sbjct: 1 MDKKE-HIAIFTTASLPWLTGTAVNPLFRAAYLAKSGERDVTLVIPWLSLKDQRLVYPNN 59
Query: 105 ITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADI 164
ITFASP E E Y+ WLE+R GFTS F +FYPGKF+ DK+SILAVGDI+EIIPD+ ADI
Sbjct: 60 ITFASPSEHEKYICQWLEERVGFTSGFSIQFYPGKFSRDKRSILAVGDISEIIPDKVADI 119
Query: 165 AVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARV 224
AVLEEPEHLTW+HHGKRWK KFR V+GI+HTNYLEYVKREKN +QAFLL+++N+W+ +
Sbjct: 120 AVLEEPEHLTWYHHGKRWKTKFRLVIGIIHTNYLEYVKREKNGVMQAFLLKYLNNWVVSI 179
Query: 225 HCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVW 284
+CHKVIRLSAATQ+Y SI+CNVHGVNPKFLEIG+KK EQQQ G AFTKGAY+IG+M+W
Sbjct: 180 YCHKVIRLSAATQDYTGSIICNVHGVNPKFLEIGKKKREQQQKGEHAFTKGAYFIGKMIW 239
Query: 285 SKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFH 344
SKGY+ELL LL + KEL+ LE+DL+G+GED D++Q+AA+KL+L VRV+P RDHAD +FH
Sbjct: 240 SKGYKELLQLLKDHEKELSALEVDLFGSGEDSDEVQKAAEKLELAVRVHPARDHADALFH 299
Query: 345 DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLK 404
DYK+FLNPSTTDVVCT TAEALAMGKIVVCANHPSNDFFKQFPNC TYD +GFV+ TLK
Sbjct: 300 DYKLFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCWTYDDDDGFVKLTLK 359
Query: 405 ALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRIIE 464
ALAE+PAQPTDAQ H LSWE+AT+RFL+ A+L + K S++ S L + SLN + ++
Sbjct: 360 ALAEQPAQPTDAQRHDLSWEAATKRFLKAADLDKPLERKLSRTTSNFL-AASLNLQEKVD 418
Query: 465 DAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGLV 504
+A Y+H+VASGFE SRR GAIP SLQPDE+L KELGL
Sbjct: 419 EASAYVHHVASGFEVSRRIFGAIPDSLQPDEELRKELGLT 458
|
Involved in the synthesis of diacylglycerol galactolipids that are specifically found in thylakoid membranes. Specific for alpha-glycosidic linkages. Glycine max (taxid: 3847) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 1 |
| >sp|Q8W1S1|DGDG2_ARATH Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana GN=DGD2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/460 (70%), Positives = 384/460 (83%)
Query: 44 LMDRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPG 103
+ ++++QHIAIFTTAS+PWLTGTAVNPLFRAAYLA DGERRVTLVIPWL+L HQK VYP
Sbjct: 1 MTNQQEQHIAIFTTASIPWLTGTAVNPLFRAAYLANDGERRVTLVIPWLTLKHQKLVYPN 60
Query: 104 NITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEAD 163
+ITF+SP EQEAYVR WLE+R F F+ RFYPGKFA DK+SIL VGDI++ IPDEEAD
Sbjct: 61 SITFSSPSEQEAYVRQWLEERVSFRLAFEIRFYPGKFAIDKRSILPVGDISDAIPDEEAD 120
Query: 164 IAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLAR 223
IAVLEEPEHLTWFHHG++WK KF +V+GIVHTNYLEYVKREK R++AF L+++NSW+
Sbjct: 121 IAVLEEPEHLTWFHHGQKWKTKFNYVIGIVHTNYLEYVKREKQGRVKAFFLKYLNSWVVG 180
Query: 224 VHCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMV 283
++CHKVIRLSAATQEYP SIVCNVHGVNPKFLEIG +K+EQQ+ + FTKGAYYIG+MV
Sbjct: 181 IYCHKVIRLSAATQEYPKSIVCNVHGVNPKFLEIGLRKLEQQKLQEQPFTKGAYYIGKMV 240
Query: 284 WSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIF 343
WSKGY+ELL LL + KELA LE+DLYG+GED ++I+ AA+KL L V VYPGRDHAD +F
Sbjct: 241 WSKGYKELLKLLEKHQKELAELEVDLYGDGEDSEEIKEAARKLDLTVNVYPGRDHADSLF 300
Query: 344 HDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATL 403
H+YKVFLNPSTTDVVCT TAEALAMGKIVVCANH SN FFKQFPNCRTYD GFV ATL
Sbjct: 301 HNYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHISNKFFKQFPNCRTYDDGQGFVRATL 360
Query: 404 KALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRII 463
KAL E+P+Q T+ Q H+LSWE+AT+RF++V++L + S S S++ + +
Sbjct: 361 KALGEQPSQLTEQQRHELSWEAATQRFIKVSDLNRLSRADSNLSKRSVFASSSISVGKNL 420
Query: 464 EDAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGL 503
ED Y+H++ASGFE SR A GAIPGSLQPDE+LC++LGL
Sbjct: 421 EDMSAYIHFLASGFEASRTAFGAIPGSLQPDEELCRDLGL 460
|
Involved in the synthesis of diacylglycerol galactolipids that are specifically found in thylakoid membranes. Specific for alpha-glycosidic linkages. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 1 |
| >sp|Q6DW76|DGDG1_SOYBN Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Glycine max GN=DGD1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 550 bits (1417), Expect = e-155, Method: Compositional matrix adjust.
Identities = 253/464 (54%), Positives = 339/464 (73%), Gaps = 9/464 (1%)
Query: 49 QQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFA 108
++H+AI TTASLPW+TGTAVNPLFRAAYL++ +++VTL++PWL Q+ VYP N+TF
Sbjct: 310 ERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSAKQKVTLLVPWLCKSDQELVYPSNLTFT 369
Query: 109 SPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLE 168
SP+EQEAY+R WLE+R GF + F FYPGKF+ ++SI+ GD ++ IP +ADIA+LE
Sbjct: 370 SPEEQEAYIRSWLEERIGFKADFKISFYPGKFSEARRSIIPAGDTSQFIPSRDADIAILE 429
Query: 169 EPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHK 228
EPEHL W+HHGKRW KF VVGIVHTNYLEY+KREKN LQAFL++ +N+W+ R +CHK
Sbjct: 430 EPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFLVKHINNWVTRAYCHK 489
Query: 229 VIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGY 288
V+RLSAATQ+ P S++CNVHGVNPKFL+IGEK +++ G KAFTKGAY++G+MVW+KGY
Sbjct: 490 VLRLSAATQDLPKSVICNVHGVNPKFLKIGEKIAAERELGQKAFTKGAYFLGKMVWAKGY 549
Query: 289 EELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKV 348
+EL+ LL + +L G ++D++GNGED +++Q AA++L L + GRDHAD H YKV
Sbjct: 550 KELIDLLAKHKADLDGFKLDVFGNGEDANEVQSAARRLDLNLNFQKGRDHADDSLHRYKV 609
Query: 349 FLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALAE 408
F+NPS +DV+CTATAEALAMGK VVCA+HPSN+FF+ FPNC TY FV +AL
Sbjct: 610 FINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYRTSEDFVTKVKEALEN 669
Query: 409 EPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESL--------NSK 460
EP T Q +QLSWE+AT+RF++ +EL G ++ K + ++ L N
Sbjct: 670 EPYPLTPEQRYQLSWEAATQRFMEYSELDG-ILNKENNGEKSRVDKGKLIAKSASMPNLT 728
Query: 461 RIIEDAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGLV 504
+++ + HY +G E R GAIPG+ D+Q CK+L L+
Sbjct: 729 ELVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCKDLHLL 772
|
Involved in the synthesis of diacylglycerol galactolipids that are specifically found in thylakoid membranes. Specific for alpha-glycosidic linkages. Glycine max (taxid: 3847) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 1 |
| >sp|Q9S7D1|DGDG1_ARATH Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis thaliana GN=DGD1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 543 bits (1398), Expect = e-153, Method: Compositional matrix adjust.
Identities = 254/472 (53%), Positives = 334/472 (70%), Gaps = 7/472 (1%)
Query: 49 QQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFA 108
++H+AI TTASLPW+TGTAVNPLFRAAYLAK ++ VTLV+PWL Q+ VYP N+TF+
Sbjct: 343 KRHVAIVTTASLPWMTGTAVNPLFRAAYLAKAAKQSVTLVVPWLCESDQELVYPNNLTFS 402
Query: 109 SPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLE 168
SP+EQE+Y+R WLE+R GF + F FYPGKF+ +++SI GD ++ I ++ADIA+LE
Sbjct: 403 SPEEQESYIRKWLEERIGFKADFKISFYPGKFSKERRSIFPAGDTSQFISSKDADIAILE 462
Query: 169 EPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHK 228
EPEHL W++HGKRW KF VVGIVHTNYLEY+KREKN LQAF + VN+W+ R +C K
Sbjct: 463 EPEHLNWYYHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFFVNHVNNWVTRAYCDK 522
Query: 229 VIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGY 288
V+RLSAATQ+ P S+VCNVHGVNPKFL IGEK E++ G +AF+KGAY++G+MVW+KGY
Sbjct: 523 VLRLSAATQDLPKSVVCNVHGVNPKFLMIGEKIAEERSRGEQAFSKGAYFLGKMVWAKGY 582
Query: 289 EELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKV 348
EL+ L+ + EL +D+YGNGED ++QRAAKK L + GRDHAD H YKV
Sbjct: 583 RELIDLMAKHKSELGSFNLDVYGNGEDAVEVQRAAKKHDLNLNFLKGRDHADDALHKYKV 642
Query: 349 FLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALAE 408
F+NPS +DV+CTATAEALAMGK VVCA+HPSN+FF+ FPNC TY FV +A+ +
Sbjct: 643 FINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTSEDFVSKVQEAMTK 702
Query: 409 EPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNS-KRIIEDAF 467
EP T Q + LSWE+AT+RF++ ++L D + + + +S S+ S +++
Sbjct: 703 EPLPLTPEQMYNLSWEAATQRFMEYSDL--DKILNNGEGGRKMRKSRSVPSFNEVVDGGL 760
Query: 468 GYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGLVTELGKGHCHRPNGSW 519
+ HYV +G + R GA P + D Q CK+L LV H H+P W
Sbjct: 761 AFSHYVLTGNDFLRLCTGATPRTKDYDNQHCKDLNLVPP----HVHKPIFGW 808
|
Involved in the synthesis of diacylglycerol galactolipids that are specifically found in thylakoid membranes. Specific for alpha-glycosidic linkages. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 1 |
| >sp|Q6DW74|DGDG1_LOTJA Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Lotus japonicus GN=DGD1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 538 bits (1386), Expect = e-152, Method: Compositional matrix adjust.
Identities = 252/465 (54%), Positives = 338/465 (72%), Gaps = 11/465 (2%)
Query: 49 QQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFA 108
++H+AI TTASLPW+TGTAVNPLFRAAYL++ +++VTL++PWL Q+ VYP N+TF
Sbjct: 313 ERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSEKQKVTLLVPWLCKSDQELVYPSNLTFT 372
Query: 109 SPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLE 168
SP+EQE Y+R WLE+R GF + F FYPGKF+ ++SI+ GD + IP ++ADIA+LE
Sbjct: 373 SPEEQEGYIRNWLEERIGFKADFKISFYPGKFSQARRSIIPAGDTAQFIPSKDADIAILE 432
Query: 169 EPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHK 228
EPEHL W+HHG RW KF VVGIVHTNYLEY+KREKN LQAFL++ +N+W+AR +C K
Sbjct: 433 EPEHLNWYHHGTRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFLVKHINNWVARAYCDK 492
Query: 229 VIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGY 288
V+RLSAATQ+ P S+VCNVHGVNPKFL+IGE +++ G K FTKGAY++G+MVW+KGY
Sbjct: 493 VLRLSAATQDLPKSVVCNVHGVNPKFLKIGESIAAERELGQKGFTKGAYFLGKMVWAKGY 552
Query: 289 EELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKV 348
+EL+ LL + +L G+++D++GNGED +++Q AA++ L + GRDHAD H YKV
Sbjct: 553 KELIDLLAKHKADLDGVKLDVFGNGEDANEVQSAARRFDLNLNFQKGRDHADDSLHRYKV 612
Query: 349 FLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALAE 408
F+NPS +DV+CTATAEALAMGK VVCA+HPSN+FF+ FPNC TY F +ALA
Sbjct: 613 FINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTPEDFAVKVKEALAN 672
Query: 409 EPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKS---PSRH-----LESESL-NS 459
EP T Q +QLSWE+AT+RF++ +EL D V + K PS++ +S S+ N
Sbjct: 673 EPYPLTPEQRYQLSWEAATQRFMEYSEL--DKVLNKEKDGAKPSKNNRKIMAKSASMPNL 730
Query: 460 KRIIEDAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGLV 504
+++ + HY +G E R GA PG+ D+Q CK+L L+
Sbjct: 731 TELVDGGLAFAHYCLTGNEFLRLCTGATPGTRDYDKQHCKDLNLL 775
|
Involved in the synthesis of diacylglycerol galactolipids that are specifically found in thylakoid membranes. Specific for alpha-glycosidic linkages. Lotus japonicus (taxid: 34305) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 562 | ||||||
| 255541500 | 470 | UDP-galactose:MGDG galactosyltransferase | 0.829 | 0.991 | 0.755 | 0.0 | |
| 224130208 | 475 | predicted protein [Populus trichocarpa] | 0.813 | 0.962 | 0.735 | 0.0 | |
| 388492674 | 463 | unknown [Lotus japonicus] | 0.809 | 0.982 | 0.734 | 0.0 | |
| 75120871 | 463 | RecName: Full=Digalactosyldiacylglycerol | 0.809 | 0.982 | 0.734 | 0.0 | |
| 147854598 | 476 | hypothetical protein VITISV_018376 [Viti | 0.825 | 0.974 | 0.722 | 0.0 | |
| 351722100 | 463 | digalactosyldiacylglycerol synthase 2, c | 0.814 | 0.989 | 0.721 | 0.0 | |
| 225454079 | 466 | PREDICTED: digalactosyldiacylglycerol sy | 0.813 | 0.980 | 0.729 | 0.0 | |
| 22328179 | 473 | digalactosyldiacylglycerol synthase 2 [A | 0.818 | 0.972 | 0.7 | 0.0 | |
| 449432175 | 469 | PREDICTED: digalactosyldiacylglycerol sy | 0.825 | 0.989 | 0.690 | 0.0 | |
| 356532042 | 463 | PREDICTED: digalactosyldiacylglycerol sy | 0.814 | 0.989 | 0.706 | 0.0 |
| >gi|255541500|ref|XP_002511814.1| UDP-galactose:MGDG galactosyltransferase, putative [Ricinus communis] gi|223548994|gb|EEF50483.1| UDP-galactose:MGDG galactosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/466 (75%), Positives = 397/466 (85%)
Query: 45 MDRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGN 104
MD+KQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDG+R+VTLVIPWLSL HQK VYP N
Sbjct: 1 MDQKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGDRKVTLVIPWLSLKHQKLVYPKN 60
Query: 105 ITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADI 164
ITF+ P EQEAYVR WLEDR F F FYPGKFA DK SIL VGDI++ I DEEAD+
Sbjct: 61 ITFSLPSEQEAYVRRWLEDRIAFLCDFKLCFYPGKFAKDKGSILPVGDISDFISDEEADV 120
Query: 165 AVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARV 224
A+LEEPEHLTWFHHGKRWK KFR V+GIVHTNYLEYVKREKN RL+A LL++VNSW+ +
Sbjct: 121 AILEEPEHLTWFHHGKRWKTKFRLVIGIVHTNYLEYVKREKNGRLKALLLKYVNSWVVSI 180
Query: 225 HCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVW 284
+CHKVIRLSAATQ+Y SI+CNVHGVNPKFLEIG+KK+EQQ+NG++ FTKGAYYIG+MVW
Sbjct: 181 YCHKVIRLSAATQDYTKSIICNVHGVNPKFLEIGKKKLEQQKNGDQPFTKGAYYIGKMVW 240
Query: 285 SKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFH 344
SKGY+ELL LL+ + KEL GLE+DLYG+GED DQ+Q AAKKL+LVVRV PGRDHADP+FH
Sbjct: 241 SKGYKELLKLLDDHQKELTGLEVDLYGSGEDSDQVQEAAKKLELVVRVNPGRDHADPVFH 300
Query: 345 DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLK 404
DYKVFLNPSTTDVVCT TAEALAMGKIVVCANHPSNDFFKQF NC+TYD R GFVEA K
Sbjct: 301 DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFSNCQTYDNRKGFVEAVCK 360
Query: 405 ALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRIIE 464
ALAE+PA+ TD + + LSWE+ATERFL+VAEL K + PS++ S SLN ++ IE
Sbjct: 361 ALAEQPAELTDEERYALSWEAATERFLKVAELDLPSAWKVERVPSKNFASTSLNLRQNIE 420
Query: 465 DAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGLVTELGKG 510
DA Y+H+V SGFE SRRA GAIPGSLQPDEQ CKELGL GKG
Sbjct: 421 DASAYVHHVVSGFEVSRRAFGAIPGSLQPDEQQCKELGLAISAGKG 466
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224130208|ref|XP_002320779.1| predicted protein [Populus trichocarpa] gi|222861552|gb|EEE99094.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/461 (73%), Positives = 395/461 (85%), Gaps = 4/461 (0%)
Query: 45 MDRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGN 104
MD K+QHIAIFTTASLPW+TGTAVNPLFRAA+LAKDG R+VTLVIPWLSL HQK VYP N
Sbjct: 1 MDNKKQHIAIFTTASLPWMTGTAVNPLFRAAFLAKDGSRKVTLVIPWLSLQHQKLVYPNN 60
Query: 105 ITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADI 164
ITF SP EQ+ YVR WL++R F+ F +FYP KFA DK+SIL+VGDI+E+IPDE+AD+
Sbjct: 61 ITFTSPSEQQVYVRQWLQERISFSPAFSIQFYPAKFAVDKRSILSVGDISEVIPDEDADV 120
Query: 165 AVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARV 224
AVLEEPEHLTWFHHGKRWK KFR V+GI+HTNYLEY+KREK+ R++A +++++NSW+ +
Sbjct: 121 AVLEEPEHLTWFHHGKRWKTKFRLVIGIIHTNYLEYIKREKHGRVKAVVVKYINSWVVEI 180
Query: 225 HCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQ--NGNKAFTKGAYYIGRM 282
+CHKVIRLSAATQ+YPNSI+CNVHGVNPKFLEIG+KK+E QQ NGN+AFTKGAYYIG+M
Sbjct: 181 YCHKVIRLSAATQDYPNSIICNVHGVNPKFLEIGKKKIELQQSGNGNQAFTKGAYYIGKM 240
Query: 283 VWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPI 342
VWSKGY+EL+ LL KEL GLE+DLYG+GED DQ+Q AAKKL LVVRVYPGRDHADP+
Sbjct: 241 VWSKGYKELIKLLQDNQKELIGLEVDLYGSGEDSDQVQAAAKKLDLVVRVYPGRDHADPV 300
Query: 343 FHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEAT 402
FHDYKVFLNPSTTDVVCT TAEALAMGKIVVCANHPSN+FFKQF NC TYD GFVEAT
Sbjct: 301 FHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNEFFKQFVNCWTYDNSKGFVEAT 360
Query: 403 LKALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRI 462
+AL EEPA+ T AQ H+LSWE+ATERFL+VA+L K +KS ++ S SLN++
Sbjct: 361 SRALTEEPAELTGAQRHELSWEAATERFLRVADLDQVFARKPAKSLLKNFASTSLNTR-- 418
Query: 463 IEDAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGL 503
+ED YLHYVA G ETSRRA GAIPGSLQPDE+LC+ELGL
Sbjct: 419 MEDVSAYLHYVALGSETSRRAFGAIPGSLQPDEELCQELGL 459
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388492674|gb|AFK34403.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/456 (73%), Positives = 392/456 (85%), Gaps = 1/456 (0%)
Query: 48 KQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITF 107
K+QHIAIFTTASLPWLTGTAVNPLFRAAYL+KDGER VTLVIPWLSL Q VYP NITF
Sbjct: 3 KKQHIAIFTTASLPWLTGTAVNPLFRAAYLSKDGERDVTLVIPWLSLKDQALVYPSNITF 62
Query: 108 ASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVL 167
ASP E E Y+R WLE+R GFTS F +FYPGKF+ DK+SILAVGDI+E+IPD+EADIAVL
Sbjct: 63 ASPSEHEKYIRQWLEERVGFTSGFSIKFYPGKFSRDKRSILAVGDISEVIPDKEADIAVL 122
Query: 168 EEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCH 227
EEPEHLTWFHHGKRWK KFR V+GI+HTNYLEYVKREKN ++QAFLL+++N+W+ ++CH
Sbjct: 123 EEPEHLTWFHHGKRWKTKFRLVIGIIHTNYLEYVKREKNGQMQAFLLKYLNNWVVGIYCH 182
Query: 228 KVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKG 287
KVIRLSAATQ+Y SIVCNVHGVNPKFLEIG+KK EQQQNG++AFTKGAY+IG+MVWSKG
Sbjct: 183 KVIRLSAATQDYSGSIVCNVHGVNPKFLEIGKKKREQQQNGDQAFTKGAYFIGKMVWSKG 242
Query: 288 YEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYK 347
Y+ELL L + KEL+ LE+DL+G+GED D++Q+AAKKL++ VRV+P RDHAD +FHDYK
Sbjct: 243 YKELLHLFKNHQKELSALEVDLFGSGEDSDEVQKAAKKLEMAVRVHPARDHADALFHDYK 302
Query: 348 VFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALA 407
+FLNPSTTDVVCT TAEALAMGKIVVCANH SN+FFKQFPNC T+D GFV+ LKALA
Sbjct: 303 LFLNPSTTDVVCTTTAEALAMGKIVVCANHCSNEFFKQFPNCWTFDESKGFVQLILKALA 362
Query: 408 EEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRIIEDAF 467
EEPAQ TDAQ H LSWE+ATERFL+ AEL K S+S S ++ S SLN ++ ++DA
Sbjct: 363 EEPAQLTDAQRHDLSWEAATERFLKAAELDKPFEKKLSRSTSIYM-STSLNLQQTVDDAS 421
Query: 468 GYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGL 503
Y+H+VASGFE SRR GAIPGSL+PDE+L KELGL
Sbjct: 422 AYVHHVASGFEISRRMFGAIPGSLKPDEELSKELGL 457
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|75120871|sp|Q6DW73.1|DGDG2_LOTJA RecName: Full=Digalactosyldiacylglycerol synthase 2, chloroplastic gi|49617335|gb|AAT67423.1| digalactosyldiacylglycerol synthase 2 [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/456 (73%), Positives = 392/456 (85%), Gaps = 1/456 (0%)
Query: 48 KQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITF 107
K+QHIAIFTTASLPWLTGTAVNPLFRAAYL+KDGER VTLVIPWLSL Q VYP NITF
Sbjct: 3 KKQHIAIFTTASLPWLTGTAVNPLFRAAYLSKDGERDVTLVIPWLSLKDQALVYPNNITF 62
Query: 108 ASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVL 167
ASP E E Y+R WLE+R GFTS F +FYPGKF+ DK+SILAVGDI+E+IPD+EADIAVL
Sbjct: 63 ASPSEHEKYIRQWLEERVGFTSGFSIKFYPGKFSRDKRSILAVGDISEVIPDKEADIAVL 122
Query: 168 EEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCH 227
EEPEHLTWFHHGKRWK KFR V+GI+HTNYLEYVKREKN ++QAFLL+++N+W+ ++CH
Sbjct: 123 EEPEHLTWFHHGKRWKTKFRLVIGIIHTNYLEYVKREKNGQMQAFLLKYLNNWVVGIYCH 182
Query: 228 KVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKG 287
KVIRLSAATQ+Y SIVCNVHGVNPKFLEIG+KK EQQQNG++AFTKGAY+IG+MVWSKG
Sbjct: 183 KVIRLSAATQDYSGSIVCNVHGVNPKFLEIGKKKREQQQNGDQAFTKGAYFIGKMVWSKG 242
Query: 288 YEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYK 347
Y+ELL L + KEL+ LE+DL+G+GED D++Q+AAKKL++ VRV+P RDHAD +FHDYK
Sbjct: 243 YKELLHLFKNHQKELSALEVDLFGSGEDSDEVQKAAKKLEMAVRVHPARDHADALFHDYK 302
Query: 348 VFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALA 407
+FLNPSTTDVVCT TAEALAMGKIVVCANH SN+FFKQFPNC T+D GFV+ LKALA
Sbjct: 303 LFLNPSTTDVVCTTTAEALAMGKIVVCANHCSNEFFKQFPNCWTFDESKGFVQLILKALA 362
Query: 408 EEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRIIEDAF 467
EEPAQ TDAQ H LSWE+ATERFL+ AEL K S+S S ++ S SLN ++ ++DA
Sbjct: 363 EEPAQLTDAQRHDLSWEAATERFLKAAELDKPFEKKLSRSTSIYM-STSLNLQQTVDDAS 421
Query: 468 GYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGL 503
Y+H+VASGFE SRR GAIPGSL+PDE+L KELGL
Sbjct: 422 AYVHHVASGFEISRRMFGAIPGSLKPDEELSKELGL 457
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147854598|emb|CAN80695.1| hypothetical protein VITISV_018376 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/465 (72%), Positives = 387/465 (83%), Gaps = 1/465 (0%)
Query: 45 MDRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGN 104
MD KQ HIAIFTTASLPW+TGTAVNPLFR AYL K E +VTLVIPWLSL Q+ VYP
Sbjct: 1 MDSKQ-HIAIFTTASLPWMTGTAVNPLFRVAYLTKGREFKVTLVIPWLSLKDQELVYPNK 59
Query: 105 ITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADI 164
ITF SP EQEAYVR WL +RTGF F +FYPGKF+ DK+SIL VGDITEIIPDEEADI
Sbjct: 60 ITFKSPSEQEAYVRQWLGERTGFVCDFSIKFYPGKFSRDKRSILVVGDITEIIPDEEADI 119
Query: 165 AVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARV 224
AVLEEPEHLTW+HHGKRWK KF V+GIVHTNYLEYV+REKN RLQAFLL+++N+W+ +
Sbjct: 120 AVLEEPEHLTWYHHGKRWKTKFHLVLGIVHTNYLEYVRREKNGRLQAFLLKYINNWVVDI 179
Query: 225 HCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVW 284
+CHKVIRLSAATQ+ P SI+CNVHGVNPKFLEIG++K E QQNG++AFTKGAYYIG+MVW
Sbjct: 180 YCHKVIRLSAATQDLPRSIICNVHGVNPKFLEIGKRKNEHQQNGDRAFTKGAYYIGKMVW 239
Query: 285 SKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFH 344
SKGY+ELL LL+ KEL GLE+DLYGNGED DQ+Q AAKKL+L VRVYPG DHADP+FH
Sbjct: 240 SKGYKELLKLLHDNQKELTGLEVDLYGNGEDSDQVQGAAKKLELDVRVYPGHDHADPLFH 299
Query: 345 DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLK 404
DYKVFLNPSTTDV+CT TAEALAMGKIVVCANHPSNDFFKQF NCRTY +GFV+ TLK
Sbjct: 300 DYKVFLNPSTTDVLCTTTAEALAMGKIVVCANHPSNDFFKQFTNCRTYQDSSGFVKETLK 359
Query: 405 ALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRIIE 464
AL+EEPAQ TDAQ H+LSW++ATERFLQ A L V K + +P + S ++N ++ ++
Sbjct: 360 ALSEEPAQLTDAQMHELSWDAATERFLQAAGLDHVVERKPTDTPPKKFMSMTMNLRKNMD 419
Query: 465 DAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGLVTELGK 509
DA Y+H+VASG E SRR GAIPGSLQPDE+ +ELG + L K
Sbjct: 420 DASAYVHHVASGIEASRRVFGAIPGSLQPDEEQRQELGKLILLSK 464
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351722100|ref|NP_001237488.1| digalactosyldiacylglycerol synthase 2, chloroplastic [Glycine max] gi|75120873|sp|Q6DW75.1|DGDG2_SOYBN RecName: Full=Digalactosyldiacylglycerol synthase 2, chloroplastic gi|49617331|gb|AAT67421.1| digalactosyldiacylglycerol synthase 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/460 (72%), Positives = 391/460 (85%), Gaps = 2/460 (0%)
Query: 45 MDRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGN 104
MD+K+ HIAIFTTASLPWLTGTAVNPLFRAAYLAK GER VTLVIPWLSL Q+ VYP N
Sbjct: 1 MDKKE-HIAIFTTASLPWLTGTAVNPLFRAAYLAKSGERDVTLVIPWLSLKDQRLVYPNN 59
Query: 105 ITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADI 164
ITFASP E E Y+ WLE+R GFTS F +FYPGKF+ DK+SILAVGDI+EIIPD+ ADI
Sbjct: 60 ITFASPSEHEKYICQWLEERVGFTSGFSIQFYPGKFSRDKRSILAVGDISEIIPDKVADI 119
Query: 165 AVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARV 224
AVLEEPEHLTW+HHGKRWK KFR V+GI+HTNYLEYVKREKN +QAFLL+++N+W+ +
Sbjct: 120 AVLEEPEHLTWYHHGKRWKTKFRLVIGIIHTNYLEYVKREKNGVMQAFLLKYLNNWVVSI 179
Query: 225 HCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVW 284
+CHKVIRLSAATQ+Y SI+CNVHGVNPKFLEIG+KK EQQQ G AFTKGAY+IG+M+W
Sbjct: 180 YCHKVIRLSAATQDYTGSIICNVHGVNPKFLEIGKKKREQQQKGEHAFTKGAYFIGKMIW 239
Query: 285 SKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFH 344
SKGY+ELL LL + KEL+ LE+DL+G+GED D++Q+AA+KL+L VRV+P RDHAD +FH
Sbjct: 240 SKGYKELLQLLKDHEKELSALEVDLFGSGEDSDEVQKAAEKLELAVRVHPARDHADALFH 299
Query: 345 DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLK 404
DYK+FLNPSTTDVVCT TAEALAMGKIVVCANHPSNDFFKQFPNC TYD +GFV+ TLK
Sbjct: 300 DYKLFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCWTYDDDDGFVKLTLK 359
Query: 405 ALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRIIE 464
ALAE+PAQPTDAQ H LSWE+AT+RFL+ A+L + K S++ S L + SLN + ++
Sbjct: 360 ALAEQPAQPTDAQRHDLSWEAATKRFLKAADLDKPLERKLSRTTSNFL-AASLNLQEKVD 418
Query: 465 DAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGLV 504
+A Y+H+VASGFE SRR GAIP SLQPDE+L KELGL
Sbjct: 419 EASAYVHHVASGFEVSRRIFGAIPDSLQPDEELRKELGLT 458
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225454079|ref|XP_002266316.1| PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic [Vitis vinifera] gi|297745205|emb|CBI40285.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/458 (72%), Positives = 384/458 (83%), Gaps = 1/458 (0%)
Query: 45 MDRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGN 104
MD KQ HIAIFTTASLPW+TGTAVNPLFR AYL K E +VTLVIPWLSL Q+ VYP
Sbjct: 1 MDSKQ-HIAIFTTASLPWMTGTAVNPLFRVAYLTKGREFKVTLVIPWLSLKDQELVYPNK 59
Query: 105 ITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADI 164
ITF SP EQEAYVR WL +RTGF F +FYPGKF+ DK+SIL VGDITEIIPDEEADI
Sbjct: 60 ITFKSPSEQEAYVRQWLGERTGFVCDFSIKFYPGKFSRDKRSILVVGDITEIIPDEEADI 119
Query: 165 AVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARV 224
AVLEEPEHLTW+HHGKRWK KF V+GIVHTNYLEYV+REKN RLQAFLL+++N+W+ +
Sbjct: 120 AVLEEPEHLTWYHHGKRWKTKFHLVLGIVHTNYLEYVRREKNGRLQAFLLKYINNWVVDI 179
Query: 225 HCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVW 284
+CHKVIRLSAATQ+ P SI+CNVHGVNPKFLEIG++K E QQNG++AFTKGAYYIG+MVW
Sbjct: 180 YCHKVIRLSAATQDLPRSIICNVHGVNPKFLEIGKRKNEHQQNGDRAFTKGAYYIGKMVW 239
Query: 285 SKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFH 344
SKGY+ELL LL+ KEL GLE+DLYGNGED DQ+Q AAKKL+L VRVYPG DHADP+FH
Sbjct: 240 SKGYKELLKLLHDNQKELTGLEVDLYGNGEDSDQVQGAAKKLELDVRVYPGHDHADPLFH 299
Query: 345 DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLK 404
DYKVFLNPSTTDV+CT TAEALAMGKIVVCANHPSNDFFKQF NCRTY +GFV+ TLK
Sbjct: 300 DYKVFLNPSTTDVLCTTTAEALAMGKIVVCANHPSNDFFKQFTNCRTYQDSSGFVKETLK 359
Query: 405 ALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRIIE 464
AL+EEPAQ TDAQ H+LSW++ATERFLQ A L V K + +P + S ++N ++ ++
Sbjct: 360 ALSEEPAQLTDAQMHELSWDAATERFLQAAGLDHVVERKPTDTPPKKFMSMTMNLRKNMD 419
Query: 465 DAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELG 502
DA Y+H+VASG E SRR GAIPGSLQPDE+ +ELG
Sbjct: 420 DASAYVHHVASGIEASRRVFGAIPGSLQPDEEQRQELG 457
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22328179|ref|NP_191964.2| digalactosyldiacylglycerol synthase 2 [Arabidopsis thaliana] gi|75161985|sp|Q8W1S1.1|DGDG2_ARATH RecName: Full=Digalactosyldiacylglycerol synthase 2, chloroplastic gi|18141112|gb|AAL60504.1|AF421193_1 digalactosyldiacylglycerol synthase [Arabidopsis thaliana] gi|33589694|gb|AAQ22613.1| At4g00550 [Arabidopsis thaliana] gi|110736406|dbj|BAF00170.1| digalactosyldiacylglycerol synthase [Arabidopsis thaliana] gi|332656498|gb|AEE81898.1| digalactosyldiacylglycerol synthase 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/460 (70%), Positives = 384/460 (83%)
Query: 44 LMDRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPG 103
+ ++++QHIAIFTTAS+PWLTGTAVNPLFRAAYLA DGERRVTLVIPWL+L HQK VYP
Sbjct: 1 MTNQQEQHIAIFTTASIPWLTGTAVNPLFRAAYLANDGERRVTLVIPWLTLKHQKLVYPN 60
Query: 104 NITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEAD 163
+ITF+SP EQEAYVR WLE+R F F+ RFYPGKFA DK+SIL VGDI++ IPDEEAD
Sbjct: 61 SITFSSPSEQEAYVRQWLEERVSFRLAFEIRFYPGKFAIDKRSILPVGDISDAIPDEEAD 120
Query: 164 IAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLAR 223
IAVLEEPEHLTWFHHG++WK KF +V+GIVHTNYLEYVKREK R++AF L+++NSW+
Sbjct: 121 IAVLEEPEHLTWFHHGQKWKTKFNYVIGIVHTNYLEYVKREKQGRVKAFFLKYLNSWVVG 180
Query: 224 VHCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMV 283
++CHKVIRLSAATQEYP SIVCNVHGVNPKFLEIG +K+EQQ+ + FTKGAYYIG+MV
Sbjct: 181 IYCHKVIRLSAATQEYPKSIVCNVHGVNPKFLEIGLRKLEQQKLQEQPFTKGAYYIGKMV 240
Query: 284 WSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIF 343
WSKGY+ELL LL + KELA LE+DLYG+GED ++I+ AA+KL L V VYPGRDHAD +F
Sbjct: 241 WSKGYKELLKLLEKHQKELAELEVDLYGDGEDSEEIKEAARKLDLTVNVYPGRDHADSLF 300
Query: 344 HDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATL 403
H+YKVFLNPSTTDVVCT TAEALAMGKIVVCANH SN FFKQFPNCRTYD GFV ATL
Sbjct: 301 HNYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHISNKFFKQFPNCRTYDDGQGFVRATL 360
Query: 404 KALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRII 463
KAL E+P+Q T+ Q H+LSWE+AT+RF++V++L + S S S++ + +
Sbjct: 361 KALGEQPSQLTEQQRHELSWEAATQRFIKVSDLNRLSRADSNLSKRSVFASSSISVGKNL 420
Query: 464 EDAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGL 503
ED Y+H++ASGFE SR A GAIPGSLQPDE+LC++LGL
Sbjct: 421 EDMSAYIHFLASGFEASRTAFGAIPGSLQPDEELCRDLGL 460
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449432175|ref|XP_004133875.1| PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic-like [Cucumis sativus] gi|449480158|ref|XP_004155815.1| PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/465 (69%), Positives = 377/465 (81%), Gaps = 1/465 (0%)
Query: 45 MDRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGN 104
MDRKQ HIAIFTTA LPW+TGTAVNPLFRAAYL+ DG+R+VTLV+PWLSL Q+ VYP N
Sbjct: 1 MDRKQ-HIAIFTTACLPWMTGTAVNPLFRAAYLSMDGDRKVTLVVPWLSLRDQELVYPSN 59
Query: 105 ITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADI 164
TF P +QE Y+R WLE+RTG F FYPGKFA DK+SIL VGDI+EIIPD E+DI
Sbjct: 60 TTFILPSQQEKYIRQWLEERTGSKFNFTLLFYPGKFAVDKRSILPVGDISEIIPDHESDI 119
Query: 165 AVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARV 224
AVLEEPEHLTW+HHGKRWK KF VVGI+HTNYLEYVKREKN ++AFLLE++N W+ +
Sbjct: 120 AVLEEPEHLTWYHHGKRWKNKFTLVVGIIHTNYLEYVKREKNGAVEAFLLEYINRWVVHI 179
Query: 225 HCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVW 284
+CHKVIRLSAATQ+YP SI+CNVHGVNPKFLEIG+KKMEQQQNG + F KGAYYIG+M+W
Sbjct: 180 YCHKVIRLSAATQDYPKSIICNVHGVNPKFLEIGKKKMEQQQNGGQVFGKGAYYIGKMIW 239
Query: 285 SKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFH 344
SKGY EL+ LL+ Y K+ A LE+DL+GNGED D++Q+A + L++ V+V+PGRDH DPIFH
Sbjct: 240 SKGYRELVKLLSDYQKDFAELEVDLFGNGEDSDEVQKATQDLEVSVKVHPGRDHTDPIFH 299
Query: 345 DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLK 404
DYKVFLNPSTTDVVCT TAEALAMGK VVCANHPSN+FFKQFPNC YD +GFV+A K
Sbjct: 300 DYKVFLNPSTTDVVCTTTAEALAMGKFVVCANHPSNEFFKQFPNCLLYDNNDGFVKAVFK 359
Query: 405 ALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRIIE 464
AL EEP Q TDAQ H+LSWE+ATERFL+ AEL + K K+ S+ S SL R +
Sbjct: 360 ALLEEPEQLTDAQRHELSWEAATERFLKAAELDQSLARKPQKTRSKKFLSLSLQLGRKFD 419
Query: 465 DAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGLVTELGK 509
DA Y+H+++ GFE SRR GA+PGSL PDEQ CKELGL + K
Sbjct: 420 DATAYIHHMSLGFEGSRRVFGAVPGSLHPDEQQCKELGLASPSSK 464
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356532042|ref|XP_003534583.1| PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/460 (70%), Positives = 386/460 (83%), Gaps = 2/460 (0%)
Query: 45 MDRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGN 104
MD+K+ HIAIFTTASLPWLTGTAVNPLFRAAYLAK GER VTLVIPWLSL Q VYP N
Sbjct: 1 MDKKE-HIAIFTTASLPWLTGTAVNPLFRAAYLAKSGERDVTLVIPWLSLKDQGLVYPNN 59
Query: 105 ITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADI 164
I FASP E E Y+R WLE+R GFT F +FYPGKF+ DK+SILAVGDI+EIIPD+ ADI
Sbjct: 60 IKFASPSEHEKYIRQWLEERVGFTCGFSIQFYPGKFSRDKRSILAVGDISEIIPDKVADI 119
Query: 165 AVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARV 224
AVLEEPEHLTW+HHGKRWK KFR V+GI+HTNYLEYVKREKN +QAFL++++N+W+ +
Sbjct: 120 AVLEEPEHLTWYHHGKRWKTKFRLVIGIIHTNYLEYVKREKNGTMQAFLMKYLNNWVVGI 179
Query: 225 HCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVW 284
+CHKVIRLSAATQ+Y SI+CNVHGVNPKFLEIG+KK EQQQ G +AFTKGAY+IG+M+W
Sbjct: 180 YCHKVIRLSAATQDYTGSIICNVHGVNPKFLEIGKKKREQQQKGEQAFTKGAYFIGKMIW 239
Query: 285 SKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFH 344
SKGY+ELL LL + KEL+ LE+DL+G+GED +++Q+AA+KL+L V V+P RDHAD FH
Sbjct: 240 SKGYKELLQLLKDHQKELSALEVDLFGSGEDSNEVQKAAEKLELAVSVHPARDHADARFH 299
Query: 345 DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLK 404
DYK+FLNPSTTDVVCT TAEALAMGKIVVCANHPSNDFFKQFPNC TYD + FV+ TLK
Sbjct: 300 DYKLFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCWTYDDDDEFVKLTLK 359
Query: 405 ALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRIIE 464
ALAE+PAQPTDAQ H LSWE+AT+RFL+ A+L + K ++ S L + S+N + ++
Sbjct: 360 ALAEQPAQPTDAQRHDLSWEAATKRFLKAADLDKPLDRKLLRTSSNFL-AASINLQEKVD 418
Query: 465 DAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGLV 504
+A Y+H+VASGFE SRR GAIP SLQPDE+L KELGL
Sbjct: 419 EASAYVHHVASGFEVSRRIFGAIPDSLQPDEELRKELGLT 458
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 562 | ||||||
| TAIR|locus:2126998 | 473 | DGD2 "digalactosyl diacylglyce | 0.814 | 0.968 | 0.696 | 7e-180 | |
| TAIR|locus:2098333 | 808 | DGD1 "DIGALACTOSYL DIACYLGLYCE | 0.820 | 0.570 | 0.540 | 1.5e-140 |
| TAIR|locus:2126998 DGD2 "digalactosyl diacylglycerol deficient 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1746 (619.7 bits), Expect = 7.0e-180, P = 7.0e-180
Identities = 322/462 (69%), Positives = 389/462 (84%)
Query: 44 LMDRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPG 103
+ ++++QHIAIFTTAS+PWLTGTAVNPLFRAAYLA DGERRVTLVIPWL+L HQK VYP
Sbjct: 1 MTNQQEQHIAIFTTASIPWLTGTAVNPLFRAAYLANDGERRVTLVIPWLTLKHQKLVYPN 60
Query: 104 NITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEAD 163
+ITF+SP EQEAYVR WLE+R F F+ RFYPGKFA DK+SIL VGDI++ IPDEEAD
Sbjct: 61 SITFSSPSEQEAYVRQWLEERVSFRLAFEIRFYPGKFAIDKRSILPVGDISDAIPDEEAD 120
Query: 164 IAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLAR 223
IAVLEEPEHLTWFHHG++WK KF +V+GIVHTNYLEYVKREK R++AF L+++NSW+
Sbjct: 121 IAVLEEPEHLTWFHHGQKWKTKFNYVIGIVHTNYLEYVKREKQGRVKAFFLKYLNSWVVG 180
Query: 224 VHCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMV 283
++CHKVIRLSAATQEYP SIVCNVHGVNPKFLEIG +K+EQQ+ + FTKGAYYIG+MV
Sbjct: 181 IYCHKVIRLSAATQEYPKSIVCNVHGVNPKFLEIGLRKLEQQKLQEQPFTKGAYYIGKMV 240
Query: 284 WSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIF 343
WSKGY+ELL LL + KELA LE+DLYG+GED ++I+ AA+KL L V VYPGRDHAD +F
Sbjct: 241 WSKGYKELLKLLEKHQKELAELEVDLYGDGEDSEEIKEAARKLDLTVNVYPGRDHADSLF 300
Query: 344 HDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATL 403
H+YKVFLNPSTTDVVCT TAEALAMGKIVVCANH SN FFKQFPNCRTYD GFV ATL
Sbjct: 301 HNYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHISNKFFKQFPNCRTYDDGQGFVRATL 360
Query: 404 KALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRH--LESESLNSKR 461
KAL E+P+Q T+ Q H+LSWE+AT+RF++V++L + +++ + S+ S S++ +
Sbjct: 361 KALGEQPSQLTEQQRHELSWEAATQRFIKVSDL--NRLSRADSNLSKRSVFASSSISVGK 418
Query: 462 IIEDAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGL 503
+ED Y+H++ASGFE SR A GAIPGSLQPDE+LC++LGL
Sbjct: 419 NLEDMSAYIHFLASGFEASRTAFGAIPGSLQPDEELCRDLGL 460
|
|
| TAIR|locus:2098333 DGD1 "DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1375 (489.1 bits), Expect = 1.5e-140, P = 1.5e-140
Identities = 253/468 (54%), Positives = 333/468 (71%)
Query: 49 QQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFA 108
++H+AI TTASLPW+TGTAVNPLFRAAYLAK ++ VTLV+PWL Q+ VYP N+TF+
Sbjct: 343 KRHVAIVTTASLPWMTGTAVNPLFRAAYLAKAAKQSVTLVVPWLCESDQELVYPNNLTFS 402
Query: 109 SPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLE 168
SP+EQE+Y+R WLE+R GF + F FYPGKF+ +++SI GD ++ I ++ADIA+LE
Sbjct: 403 SPEEQESYIRKWLEERIGFKADFKISFYPGKFSKERRSIFPAGDTSQFISSKDADIAILE 462
Query: 169 EPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHK 228
EPEHL W++HGKRW KF VVGIVHTNYLEY+KREKN LQAF + VN+W+ R +C K
Sbjct: 463 EPEHLNWYYHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFFVNHVNNWVTRAYCDK 522
Query: 229 VIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGY 288
V+RLSAATQ+ P S+VCNVHGVNPKFL IGEK E++ G +AF+KGAY++G+MVW+KGY
Sbjct: 523 VLRLSAATQDLPKSVVCNVHGVNPKFLMIGEKIAEERSRGEQAFSKGAYFLGKMVWAKGY 582
Query: 289 EELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKV 348
EL+ L+ + EL +D+YGNGED ++QRAAKK L + GRDHAD H YKV
Sbjct: 583 RELIDLMAKHKSELGSFNLDVYGNGEDAVEVQRAAKKHDLNLNFLKGRDHADDALHKYKV 642
Query: 349 FLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALAE 408
F+NPS +DV+CTATAEALAMGK VVCA+HPSN+FF+ FPNC TY FV +A+ +
Sbjct: 643 FINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTSEDFVSKVQEAMTK 702
Query: 409 EPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNS-KRIIEDAF 467
EP T Q + LSWE+AT+RF++ ++L D + + + +S S+ S +++
Sbjct: 703 EPLPLTPEQMYNLSWEAATQRFMEYSDL--DKILNNGEGGRKMRKSRSVPSFNEVVDGGL 760
Query: 468 GYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGLVTELGKGHCHRP 515
+ HYV +G + R GA P + D Q CK+L LV H H+P
Sbjct: 761 AFSHYVLTGNDFLRLCTGATPRTKDYDNQHCKDLNLVPP----HVHKP 804
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 562 542 0.00095 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 620 (66 KB)
Total size of DFA: 332 KB (2167 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.33u 0.11s 43.44t Elapsed: 00:00:02
Total cpu time: 43.33u 0.11s 43.44t Elapsed: 00:00:02
Start: Tue May 21 09:47:38 2013 End: Tue May 21 09:47:40 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q8W1S1 | DGDG2_ARATH | 2, ., 4, ., 1, ., 2, 4, 1 | 0.7 | 0.8185 | 0.9725 | yes | no |
| Q6DW73 | DGDG2_LOTJA | 2, ., 4, ., 1, ., 2, 4, 1 | 0.7346 | 0.8096 | 0.9827 | N/A | no |
| Q6DW75 | DGDG2_SOYBN | 2, ., 4, ., 1, ., 2, 4, 1 | 0.7217 | 0.8149 | 0.9892 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 562 | |||
| PLN02846 | 462 | PLN02846, PLN02846, digalactosyldiacylglycerol syn | 0.0 | |
| PLN02501 | 794 | PLN02501, PLN02501, digalactosyldiacylglycerol syn | 0.0 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 6e-11 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 7e-09 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 1e-08 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 6e-07 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 8e-07 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 1e-06 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 2e-06 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 5e-06 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 5e-06 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 6e-06 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 7e-04 | |
| PRK09922 | 359 | PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipo | 0.003 |
| >gnl|CDD|166487 PLN02846, PLN02846, digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Score = 859 bits (2220), Expect = 0.0
Identities = 348/458 (75%), Positives = 397/458 (86%)
Query: 46 DRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNI 105
+K+QHIAIFTTASLPW+TGTAVNPLFRAAYLAKDG+R VTLVIPWLSL QK VYP I
Sbjct: 1 MQKKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKI 60
Query: 106 TFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIA 165
TF+SP EQEAYVR WLE+R F F +FYPGKF+ DK+SIL VGDI+E IPDEEADIA
Sbjct: 61 TFSSPSEQEAYVRQWLEERISFLPKFSIKFYPGKFSTDKRSILPVGDISETIPDEEADIA 120
Query: 166 VLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVH 225
VLEEPEHLTW+HHGKRWK KFR V+GIVHTNYLEYVKREKN R++AFLL+++NSW+ ++
Sbjct: 121 VLEEPEHLTWYHHGKRWKTKFRLVIGIVHTNYLEYVKREKNGRVKAFLLKYINSWVVDIY 180
Query: 226 CHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWS 285
CHKVIRLSAATQ+YP SI+CNVHGVNPKFLEIG+ K+EQQ+NG +AFTKGAYYIG+MVWS
Sbjct: 181 CHKVIRLSAATQDYPRSIICNVHGVNPKFLEIGKLKLEQQKNGEQAFTKGAYYIGKMVWS 240
Query: 286 KGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHD 345
KGY+ELL LL+ + KEL+GLE+DLYG+GED D+++ AA+KL+L VRVYPGRDHADP+FHD
Sbjct: 241 KGYKELLKLLHKHQKELSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGRDHADPLFHD 300
Query: 346 YKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKA 405
YKVFLNPSTTDVVCT TAEALAMGKIVVCANHPSN+FFKQFPNCRTYD GFV ATLKA
Sbjct: 301 YKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNEFFKQFPNCRTYDDGKGFVRATLKA 360
Query: 406 LAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRIIED 465
LAEEPA TDAQ H+LSWE+ATERFL+VA+L K +KS ++ S S N K+ +ED
Sbjct: 361 LAEEPAPLTDAQRHELSWEAATERFLRVADLDLPSSAKPNKSSLKNFMSTSPNLKKNMED 420
Query: 466 AFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGL 503
A YLH VASGFETSRRA GAIPGSLQPDEQ CKELGL
Sbjct: 421 ASAYLHNVASGFETSRRAFGAIPGSLQPDEQQCKELGL 458
|
Length = 462 |
| >gnl|CDD|215277 PLN02501, PLN02501, digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Score = 590 bits (1522), Expect = 0.0
Identities = 257/477 (53%), Positives = 340/477 (71%), Gaps = 10/477 (2%)
Query: 49 QQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFA 108
++H+AI TTASLPW+TGTAVNPLFRAAYLAK ++ VTL++PWL Q+ VYP N+TF+
Sbjct: 322 KRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSAKQNVTLLVPWLCKSDQELVYPNNLTFS 381
Query: 109 SPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLE 168
SP+EQE+Y+R WLE+R GF + F FYPGKF+ +++SI+ GD ++ IP ++ADIA+LE
Sbjct: 382 SPEEQESYIRNWLEERIGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILE 441
Query: 169 EPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHK 228
EPEHL W+HHGKRW KF VVG+VHTNYLEY+KREKN LQAF ++ +N+W+ R +CHK
Sbjct: 442 EPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCHK 501
Query: 229 VIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGY 288
V+RLSAATQ+ P S++CNVHGVNPKFL+IGEK E+++ G +AF+KGAY++G+MVW+KGY
Sbjct: 502 VLRLSAATQDLPKSVICNVHGVNPKFLKIGEKVAEERELGQQAFSKGAYFLGKMVWAKGY 561
Query: 289 EELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKV 348
EL+ LL + EL G +D++GNGED ++QRAAK+L L + GRDHAD H YKV
Sbjct: 562 RELIDLLAKHKNELDGFNLDVFGNGEDAHEVQRAAKRLDLNLNFLKGRDHADDSLHGYKV 621
Query: 349 FLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALAE 408
F+NPS +DV+CTATAEALAMGK VVCA+HPSN+FF+ FPNC TY FV +ALA
Sbjct: 622 FINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTSEDFVAKVKEALAN 681
Query: 409 EPAQPTDAQTHQLSWESATERFLQVAEL-----VGDVVTKRSKSPSRHLESESL-NSKRI 462
EP T Q + LSWE+AT+RF++ ++L GD +S S+ N +
Sbjct: 682 EPQPLTPEQRYNLSWEAATQRFMEYSDLDKVLNNGDDAKLSKSGGKSITKSVSMPNLSEM 741
Query: 463 IEDAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGLVTELGKGHCHRPNGSW 519
++ + HY +G E R GAIPG+ D+Q CK+L L+ H P W
Sbjct: 742 VDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCKDLHLLPP----HVENPIYGW 794
|
Length = 794 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 64.2 bits (155), Expect = 6e-11
Identities = 61/404 (15%), Positives = 120/404 (29%), Gaps = 53/404 (13%)
Query: 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGER-RVTLVIPWLSLIHQKQVYPGNITFAS 109
I I P + G L A L G V ++ P +V
Sbjct: 2 KILILIIYPPPRVGGIERYVLELAKALRLLGRGHEVLVIAPEKLEGLGIEVLR------- 54
Query: 110 PKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEE 169
L R I+ + A + +
Sbjct: 55 ------LPSVSLPLLIVRLRPALLRLLLLLKRLLPYDIIHAHSLLLAPGGLLALLLLKLL 108
Query: 170 PEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKV 229
L HG ++ L + + R+ +V
Sbjct: 109 GIPLVVTLHG-LIPRILLLPRLLLLLGLLRLLLKRLK-------------KALRLLADRV 154
Query: 230 IRLSAATQEY------PNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMV 283
I +S A +E PN IV +G++ + + + Y+GR+
Sbjct: 155 IAVSPALKELLEALGVPNKIVVIPNGIDTEKFAPARIGLLPEGGKFVVL-----YVGRLD 209
Query: 284 WSKGYEELLGLLNIYHKELAGLEMDLYGNGED-FDQIQRAAKKLKL--VVRVYPGRDHAD 340
KG + L+ K +++ + G+G + +++++ AKKL L V+ +
Sbjct: 210 PEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEE 269
Query: 341 P--IFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSN-DFFKQFPNCRTYDGRN- 396
+ VF+ PS ++ EA+A G V+ ++ + + +
Sbjct: 270 LAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDV 329
Query: 397 -GFVEATLKALAEEPAQPTDAQT------HQLSWESATERFLQV 433
+A + L + + + + SWE E+ L++
Sbjct: 330 EELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLEL 373
|
Length = 381 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 7e-09
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 15/139 (10%)
Query: 278 YIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKL--VVRVYPG 335
++GR+V KG + LL + ++ L++ + G+GE+ ++++ A KL L V
Sbjct: 7 FVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIVGDGEEEKKLKKLALKLGLEDNVIFVGF 66
Query: 336 RDHADPI--FHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSN-DFFKQFPNCRTY 392
D I + +F+ PS + EA+A G V+ + + K
Sbjct: 67 VPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIATDVGGPAEIVK-------- 118
Query: 393 DGRNGFV--EATLKALAEE 409
DG G + +ALAE
Sbjct: 119 DGETGLLVDPGDAEALAEA 137
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 1e-08
Identities = 58/289 (20%), Positives = 102/289 (35%), Gaps = 38/289 (13%)
Query: 178 HGKRWKAKFRFVVGIVHT------NYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIR 231
G R K + +V T +Y YV + + C VI
Sbjct: 99 LGLRVARKLG--IPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLS-RRFYN-RCDAVIA 154
Query: 232 LSAATQEYPNS--IVCNVH----GVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWS 285
S + + + G++ E + E+++ G Y+GR+
Sbjct: 155 PSEKIADLLREYGVKRPIEVIPTGIDLDRFEPVDGDDERRKLGIPEDEPVLLYVGRLAKE 214
Query: 286 KGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRV-YPGR-DHADPIF 343
K + L+ KE +++ + G+G + ++++ A++L L RV + G + +
Sbjct: 215 KNIDFLIRAFARLLKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREE-LP 273
Query: 344 HDYK---VFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYDGRNGF- 398
YK +F+ STT+ EA+A G VV + P D DG NGF
Sbjct: 274 DYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVA--------DGENGFL 325
Query: 399 ----VEATLKALAEEPAQPTDAQT--HQLSWESATERFLQVAELVGDVV 441
EA +AL P + + F + E + + V
Sbjct: 326 FPPGDEALAEALLRLLQDPELRRRLSKNAEESAEKFSFAKKVEKLYEEV 374
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 6e-07
Identities = 46/266 (17%), Positives = 87/266 (32%), Gaps = 51/266 (19%)
Query: 155 EIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLL 214
E E V P + + A R +++EK D + + L
Sbjct: 40 EGDYLELLPSNVKLIPVRVLKLKSLRDLLAILRLR---------RLLRKEKPDVVISHLT 90
Query: 215 EFVN---SWLARVHCHKVIRL-SAATQEYPNS----------------IVCNVHGVNPKF 254
N AR+ ++ ++ + E IV GV
Sbjct: 91 TTPNVLALLAARLGTKLIVWEHNSLSLELKRKLRLLLLIRKLYRRADKIVAVSEGVKEDL 150
Query: 255 LEIGEKKMEQ-----------------QQNGNKAFTKGAYYI---GRMVWSKGYEELLGL 294
L++ ++ ++ I GR+ KG++ L+
Sbjct: 151 LKLLGIPPDKIEVIYNPIDIEEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRA 210
Query: 295 LNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVY-PG-RDHADPIFHDYKVFLNP 352
+ KE + + G+G ++++ AK+L L RV+ G + + P +F+
Sbjct: 211 FALLRKEGPDARLVILGDGPLREELEALAKELGLADRVHFLGFQSNPYPYLKAADLFVLS 270
Query: 353 STTDVVCTATAEALAMGKIVVCANHP 378
S + EA+A+G VV + P
Sbjct: 271 SRYEGFPNVLLEAMALGTPVVATDCP 296
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 8e-07
Identities = 24/126 (19%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 278 YIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKL--VVRVYPG 335
+ R+ K ++L+ K++ +D+YG G++ ++++ ++L L V +
Sbjct: 209 TVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGY 268
Query: 336 RDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVC--ANHPSNDFFKQFPNCRTYD 393
D ++ ++ L S ++ + EAL+ G V+ N+ ++ + D
Sbjct: 269 TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIE--------D 320
Query: 394 GRNGFV 399
G NG++
Sbjct: 321 GENGYL 326
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 1e-06
Identities = 40/224 (17%), Positives = 81/224 (36%), Gaps = 30/224 (13%)
Query: 182 WKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQ-EYP 240
K ++ H + Y KR + L+ L V+ L+ + Y
Sbjct: 101 LGLKIVKLIVSEHNSPDAYKKRLRRLLLRRLLYRR---------ADAVVVLTEEDRALYY 151
Query: 241 NSIVCNVHGV-NPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYH 299
NV + NP + +K +GR+V KG++ L+
Sbjct: 152 KKFNKNVVVIPNPLPFP---PEEPSSDLKSKRIL----AVGRLVPQKGFDLLIEAWAKIA 204
Query: 300 KELAGLEMDLYGNGEDFDQIQRAAKKLKL--VVRVYPGRDHADPIFHDYKVFLNPSTTDV 357
K+ ++ + G+G + + ++ K+L L V + + + + +F+ S +
Sbjct: 205 KKHPDWKLRIVGDGPEREALEALIKELGLEDRVILLGFTKNIEEYYAKASIFVLTSRFEG 264
Query: 358 VCTATAEALAMGKIVVCANHPS--NDFFKQFPNCRTYDGRNGFV 399
EA+A G V+ + P+ ++ + DG NG +
Sbjct: 265 FPMVLLEAMAFGLPVISFDCPTGPSEIIE--------DGVNGLL 300
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 2e-06
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 23/149 (15%)
Query: 278 YIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQ-IQRAAKKLKLVVRV-YPG 335
++ R++ KG +ELL I + + + L G+G++ + +KL L RV + G
Sbjct: 193 FVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLG 252
Query: 336 -RDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCR--TY 392
RD + VF+ PS + + EA+AMG+ V+ + P CR
Sbjct: 253 FRDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPG---------CREAVI 303
Query: 393 DGRNGFV---------EATLKALAEEPAQ 412
DG NGF+ ++ L E+P
Sbjct: 304 DGVNGFLVPPGDAEALADAIERLIEDPEL 332
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 5e-06
Identities = 50/241 (20%), Positives = 87/241 (36%), Gaps = 26/241 (10%)
Query: 174 TWFHHGKRWKAKFRFVVGIVHT-NYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRL 232
W A + +V T + LE+ + L L + R ++I +
Sbjct: 93 DWLALLAAALAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALR-RADRIIAV 151
Query: 233 SAATQEY--------PNSIVCNVHGVNP-KFLEIGEKKMEQQQNGNKAFTKGAYYIGRMV 283
S AT+E P I +GV+ +F + ++GR+V
Sbjct: 152 SEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLGIPEDEPV--ILFVGRLV 209
Query: 284 WSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVY--PGRDHAD- 340
KG + LL L KE + + + G+G ++++ A +L L RV D
Sbjct: 210 PRKGVDLLLEALAKLRKEYPDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDL 269
Query: 341 -PIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSN-DFFKQFPNCRTYDGRNGF 398
++ VF+ PS + EA+A G VV ++ + + DG G
Sbjct: 270 PALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVE--------DGETGL 321
Query: 399 V 399
+
Sbjct: 322 L 322
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 5e-06
Identities = 29/136 (21%), Positives = 47/136 (34%), Gaps = 12/136 (8%)
Query: 278 YIGRMVWSKGYEELLGLLNIYHKELA----GLEMDLYGNGEDFDQIQRAAKKLKLVVRVY 333
+IG + ++ LL LL L +E+ + G+G +++ R A V
Sbjct: 4 FIGGFGHAPNWDGLLWLLEEALPLLRKALPDVELHIIGSG--PEELARLAPN----VHFL 57
Query: 334 PGRDHADPIFHDYKVFLNPSTTDV-VCTATAEALAMGKIVVCANHPSNDFFKQFP-NCRT 391
+ + V L P EALA G VV + + +
Sbjct: 58 GFVEDLAALLASADVALAPLRFGAGSPLKLLEALAAGLPVVATDIGAEGLPEDLGWGVLV 117
Query: 392 YDGRNGFVEATLKALA 407
D F EA ++ LA
Sbjct: 118 ADDPEEFAEAIVRLLA 133
|
Length = 134 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 6e-06
Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 13/145 (8%)
Query: 243 IVCNVHGVNPKFLEIGEKKME--QQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHK 300
+V VHGVN LE + +K F +GR+ KG ++L+ + +
Sbjct: 78 LVLTVHGVNRSLLEGVPLSLLALSIGLADKVF------VGRLAPEKGLDDLIEAFALLKE 131
Query: 301 ELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRV-YPGRDHADP----IFHDYKVFLNPSTT 355
L++ + G+G + + ++ L L+ RV + G + + VF+ PS
Sbjct: 132 RGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLR 191
Query: 356 DVVCTATAEALAMGKIVVCANHPSN 380
+ EA+A G V+ +
Sbjct: 192 EGFGLVVLEAMACGLPVIATDVGGP 216
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 7e-04
Identities = 51/243 (20%), Positives = 88/243 (36%), Gaps = 43/243 (17%)
Query: 225 HCHKVIRLSAATQE------YPNSIVCNVH-GVNPKFLEIGEKKMEQQQNGNKAFTKGAY 277
VI +S A + V + GV+ + ++ ++ +
Sbjct: 148 RADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPADRAEARKLGL----PEDKK 203
Query: 278 YI---GRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKL--VVRV 332
I GR+V KG + L+ L K+ + + + G+G + ++ A +L L V
Sbjct: 204 VILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTF 263
Query: 333 YPGRDHADPIFHDYK---VFLNPSTTDVVCTATAEALAMGKIVVCANHP-SNDFFKQFPN 388
H + + Y VF+ PS + EA+A G VV + +
Sbjct: 264 LGAVPHEE-VPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIIT---- 318
Query: 389 CRTYDGRNGFV----------EATLKALAEEPAQPTDAQT----HQLSWESATERFLQVA 434
DG NG + EA L+ LA+ + A + SWE+ ER L++
Sbjct: 319 ----DGENGLLVPPGDPEALAEAILRLLADPWLRLGRAARRRVAERFSWENVAERLLELY 374
Query: 435 ELV 437
V
Sbjct: 375 REV 377
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|182148 PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.003
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 251 NPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVW--SKGYEELLGLLNIYHKELAGLEMD 308
NP +EI + + Y+GR+ + K +EL L+ E ++
Sbjct: 163 NP--VEIKTIIIPPPERDK---PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEW---QLH 214
Query: 309 LYGNGEDFDQIQRAAKKLKLVVRV 332
+ G+G DF++ + +++L + R+
Sbjct: 215 IIGDGSDFEKCKAYSRELGIEQRI 238
|
Length = 359 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 562 | |||
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.98 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.98 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.98 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.98 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.98 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.98 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.97 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.97 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.97 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.97 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.97 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.97 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.97 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.97 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.97 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.97 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.97 | |
| PLN00142 | 815 | sucrose synthase | 99.97 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.97 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.97 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.97 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.97 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.97 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.97 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.97 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.97 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.96 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.96 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.96 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.96 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.96 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.96 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.95 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.95 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.94 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.93 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.92 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.88 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.88 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.88 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.87 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.87 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.87 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.87 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.87 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.86 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.85 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.85 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.84 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.84 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.82 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.78 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.74 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.73 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.71 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.71 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.71 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.68 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.67 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.67 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.65 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.64 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.53 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.53 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.45 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.45 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.42 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.22 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.21 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.19 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.17 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.07 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.06 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.98 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.96 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.9 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 98.83 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.82 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.81 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.76 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 98.69 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 98.68 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 98.63 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.53 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.49 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.41 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 98.39 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 98.38 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.31 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.31 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.3 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 98.3 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.28 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.27 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 98.13 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.13 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.08 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.04 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 97.91 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.87 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.45 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 97.45 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.35 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 97.29 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 97.29 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 97.03 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 96.76 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 96.25 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 96.24 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 96.13 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 96.09 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 95.83 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 95.79 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 95.67 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 95.5 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 94.8 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 94.8 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 94.74 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 94.57 | |
| PF15024 | 559 | Glyco_transf_18: Glycosyltransferase family 18 | 93.94 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 92.91 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 92.68 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 92.51 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 92.37 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 92.02 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 91.61 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 90.91 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 90.71 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 90.66 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 90.52 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 90.04 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 89.99 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 89.45 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 88.7 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 88.63 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 88.5 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 88.44 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 88.06 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 87.8 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 87.78 | |
| PLN00414 | 446 | glycosyltransferase family protein | 87.53 | |
| PLN02208 | 442 | glycosyltransferase family protein | 87.45 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 87.32 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 86.04 | |
| PLN02764 | 453 | glycosyltransferase family protein | 85.88 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 85.79 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 85.79 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 85.79 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 84.62 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 83.62 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 82.09 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 82.08 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 81.19 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 81.01 |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-87 Score=701.88 Aligned_cols=491 Identities=53% Similarity=0.938 Sum_probs=446.5
Q ss_pred cceeeccCCcCCCCcCCCChhhhchhhccCCeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCcccccc
Q 008544 20 AAVEFSSQSSYPKGFLHKNPEILSLMDRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQ 99 (562)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~ 99 (562)
|+|+|||||+|+||+||+..+.+ .| .++++|+|||++.+|||||++++++.+|.||++.|+++||++.||++..||+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~r~~~ivTtAslPWmTGtavnpL~rAayLa~~~~~~VtlviPWl~~~dq~~ 372 (794)
T PLN02501 295 ASVLQSTGHCYDGGFWTDSSKHE-LS-DGKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSAKQNVTLLVPWLCKSDQEL 372 (794)
T ss_pred hhhhhccCccccCCcccCccccc-cc-cCCCeEEEEEcccCcccccccccHHHHHHHhcccCCceEEEEEecCCcccccc
Confidence 77999999999999999999885 44 44499999999999999999999999999999998899999999999999999
Q ss_pred ccCCCceeCCchhhHHHHHHHhhhccCCCCCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhch
Q 008544 100 VYPGNITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHG 179 (562)
Q Consensus 100 ~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~ 179 (562)
+||++++|.+|++|+.|++.|++.++.+.+.+++.+||++|...+++|+|++++.+.+.+++|||||+++|++++|++|+
T Consensus 373 vy~~~~~F~~p~eQe~~ir~wl~~r~g~~~~~~i~fYpg~~~~~~~SI~p~gdI~~~L~~f~PDVVHLatP~~LGw~~~G 452 (794)
T PLN02501 373 VYPNNLTFSSPEEQESYIRNWLEERIGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHG 452 (794)
T ss_pred ccCCCcccCCHHHHHHHHHHHHHHhcCCCCCceEEeecchhccCCccccchHHHHHHhhccCCCEEEECCchhhccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred HHHHhhcCCEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhccCCCccccccccCCCCcCcch
Q 008544 180 KRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGE 259 (562)
Q Consensus 180 ~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~v~GVd~~~~~~~~ 259 (562)
.+|+++++|+|.++||+|..|..+++.+.+...+.+.+++++.+++||.|+++|..+++++...+.+++|||+++|.+..
T Consensus 453 lr~ArKl~PVVasyHTny~eYl~~y~~g~L~~~llk~l~~~v~r~hcD~VIaPS~atq~L~~~vI~nVnGVDte~F~P~~ 532 (794)
T PLN02501 453 KRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCHKVLRLSAATQDLPKSVICNVHGVNPKFLKIGE 532 (794)
T ss_pred HHHHHHcCCeEEEEeCCcHHHHhHhcchhHHHHHHHHHHHHHHHhhCCEEEcCCHHHHHhcccceeecccccccccCCcc
Confidence 99999999999999999999999998888888888899999998889999999999998887777778899999999876
Q ss_pred hhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCCh
Q 008544 260 KKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHA 339 (562)
Q Consensus 260 ~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~ 339 (562)
+.......+...+.+.++|+||+.+.||++.|++|+..+..+.|+++|+|+|+|++.+++++.++++++.+.|+++.++.
T Consensus 533 r~~~~r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~reeLe~la~eLgL~V~FLG~~dd~ 612 (794)
T PLN02501 533 KVAEERELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGEDAHEVQRAAKRLDLNLNFLKGRDHA 612 (794)
T ss_pred hhHHHHhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCccHHHHHHHHHHcCCEEEecCCCCCH
Confidence 65444455655555678999999999999999999999988888999999999999999999999999888778888888
Q ss_pred HHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCCccccccCCceEeeCCHHHHHHHHHHHHhCCCCCccHHHHh
Q 008544 340 DPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALAEEPAQPTDAQTH 419 (562)
Q Consensus 340 ~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~~l~~~ar~ 419 (562)
.++|+.+|+||+||..|+||++++||||||+|||++++++.+++.++.+|++++|+++|+++|.+++++++.+....++.
T Consensus 613 ~~lyasaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~V~~g~nGll~~D~EafAeAI~~LLsd~~~rl~~~a~~ 692 (794)
T PLN02501 613 DDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTSEDFVAKVKEALANEPQPLTPEQRY 692 (794)
T ss_pred HHHHHhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCCceEeecCCeEecCCHHHHHHHHHHHHhCchhhhHHHHHh
Confidence 89999999999999999999999999999999999999997778889999999999999999999999988655555567
Q ss_pred cCCHHHHHHHHHHHHHhcCccccc------CCCCCCccccccccchHHHHHHHHHHhhhhhcccchhhhhhcCCCCCCCC
Q 008544 420 QLSWESATERFLQVAELVGDVVTK------RSKSPSRHLESESLNSKRIIEDAFGYLHYVASGFETSRRALGAIPGSLQP 493 (562)
Q Consensus 420 ~~sw~~~~~~~~~~y~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~l~~~h~~~~g~~~~r~~~ga~~~~~~~ 493 (562)
.+||+++++++++.-+..+..+.. ..+..........+++++.+|+++|+.|++++|.|.+|+++||+|+|+++
T Consensus 693 ~~SWeAaadrLle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~g~~~~r~~~ga~~~~~~~ 772 (794)
T PLN02501 693 NLSWEAATQRFMEYSDLDKVLNNGDDAKLSKSGGKSITKSVSMPNLSEMVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDY 772 (794)
T ss_pred hCCHHHHHHHHHHhhccccccccccccccccccccchhhhccCCcHHHHhhhHHHHHHHHhhccHHHHHHhcCCCCCCCc
Confidence 999999999999999887655441 11222333444448899999999999999999999999999999999999
Q ss_pred ChHHHHHhCCCCcccCccc
Q 008544 494 DEQLCKELGLVTELGKGHC 512 (562)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~ 512 (562)
|+|+|++|||.||++++..
T Consensus 773 ~~~~~~~~~~~~~~~~~~~ 791 (794)
T PLN02501 773 DKQHCKDLHLLPPHVENPI 791 (794)
T ss_pred CHHHHHhcCCCCCCCCCCC
Confidence 9999999999999998754
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-74 Score=600.53 Aligned_cols=458 Identities=76% Similarity=1.224 Sum_probs=411.0
Q ss_pred CCeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCC
Q 008544 49 QQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFT 128 (562)
Q Consensus 49 ~~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (562)
+|||+|||++|+||++|+++++..++.+|+++|.|+|+|++||+...++..+||++++|.+++.++.+++.|...++...
T Consensus 4 ~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~v~r~ 83 (462)
T PLN02846 4 KQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEERISFL 83 (462)
T ss_pred CCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCeEEEe
Confidence 49999999999999999999999999999999735999999999877788889999999999999999999987777788
Q ss_pred CCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchH
Q 008544 129 STFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDR 208 (562)
Q Consensus 129 ~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~ 208 (562)
+.+++++||.++....+.+.+..++.+.|++++|||||+++|++++|+.++.+|.+++.+++.++||++..|..+++.+.
T Consensus 84 ~s~~~p~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~k~~~vV~tyHT~y~~Y~~~~~~g~ 163 (462)
T PLN02846 84 PKFSIKFYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKTKFRLVIGIVHTNYLEYVKREKNGR 163 (462)
T ss_pred cccccccCcccccccccccCChHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHhcCCcEEEEECCChHHHHHHhccch
Confidence 99999999998777778888889999999999999999999999999877888998888999999999999998877666
Q ss_pred HHHHHHHHHHHHHHHHhccEEEEcChhhhccCCCccccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCH
Q 008544 209 LQAFLLEFVNSWLARVHCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGY 288 (562)
Q Consensus 209 ~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~ 288 (562)
....+.+.+.+++.+.+||.++++|...+++....+.+++|||+.+|.+..+.......+...+.++++|+||+.++||+
T Consensus 164 ~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~l~~~~i~~v~GVd~~~f~~~~~~~~~~~~~~~~~~~~~l~vGRL~~eK~~ 243 (462)
T PLN02846 164 VKAFLLKYINSWVVDIYCHKVIRLSAATQDYPRSIICNVHGVNPKFLEIGKLKLEQQKNGEQAFTKGAYYIGKMVWSKGY 243 (462)
T ss_pred HHHHHHHHHHHHHHHHhcCEEEccCHHHHHHhhCEEecCceechhhcCCCcccHhhhcCCCCCcceEEEEEecCcccCCH
Confidence 67778888888888888999999999888877776677789999998876553221112212224579999999999999
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHc
Q 008544 289 EELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAM 368 (562)
Q Consensus 289 ~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~ 368 (562)
+.+++++.++.+..|+++|+|+|+|++++++++.+++++++++++.+..+.+++|+.+|+||+||..|+||++++|||||
T Consensus 244 ~~Li~a~~~l~~~~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~~~~~~~~~~~DvFv~pS~~Et~g~v~lEAmA~ 323 (462)
T PLN02846 244 KELLKLLHKHQKELSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGRDHADPLFHDYKVFLNPSTTDVVCTTTAEALAM 323 (462)
T ss_pred HHHHHHHHHHHhhCCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCCCCHHHHHHhCCEEEECCCcccchHHHHHHHHc
Confidence 99999999998888999999999999999999999999988888888888889999999999999999999999999999
Q ss_pred CCcEEeeCCCCccccccCCceEeeCCHHHHHHHHHHHHhCCCCCccHHHHhcCCHHHHHHHHHHHHHhcCcccccCCCCC
Q 008544 369 GKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSP 448 (562)
Q Consensus 369 G~PVI~t~~~~~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~~l~~~ar~~~sw~~~~~~~~~~y~~~~~~~~~~~~~~ 448 (562)
|+|||+++.++.+++.++.+|+.++|.++|++++.++++++..+++.++++.|||+.+++++++.|+.....+..+.+..
T Consensus 324 G~PVVa~~~~~~~~v~~~~ng~~~~~~~~~a~ai~~~l~~~~~~~~~~a~~~~SWe~~~~~l~~~~~~~~~~~~~~~~~~ 403 (462)
T PLN02846 324 GKIVVCANHPSNEFFKQFPNCRTYDDGKGFVRATLKALAEEPAPLTDAQRHELSWEAATERFLRVADLDLPSSAKPNKSS 403 (462)
T ss_pred CCcEEEecCCCcceeecCCceEecCCHHHHHHHHHHHHccCchhHHHHHHHhCCHHHHHHHHHHHhccCCcCcccccccc
Confidence 99999999999999999999999999999999999999987666777777999999999999999999998776665555
Q ss_pred CccccccccchHHHHHHHHHHhhhhhcccchhhhhhcCCCCCCCCChHHHHHhCCCCc
Q 008544 449 SRHLESESLNSKRIIEDAFGYLHYVASGFETSRRALGAIPGSLQPDEQLCKELGLVTE 506 (562)
Q Consensus 449 ~~~~~~~~~~l~~~~~~~l~~~h~~~~g~~~~r~~~ga~~~~~~~~~~~~~~~~~~~~ 506 (562)
.+...+.++++.+.+|+++|++|++++|.|.+|+++||+|+|+++|+|+|++|||.+|
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (462)
T PLN02846 404 LKNFMSTSPNLKKNMEDASAYLHNVASGFETSRRAFGAIPGSLQPDEQQCKELGLALQ 461 (462)
T ss_pred ccchhccCccHhhhhhhHHHHHHHHhhhhHHHHHHccCCCCCCCCCHHHHHhcCCCCC
Confidence 6666777789999999999999999999999999999999999999999999999887
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-36 Score=320.46 Aligned_cols=358 Identities=17% Similarity=0.157 Sum_probs=250.8
Q ss_pred ccCCeEEEEeccc-CCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhcc
Q 008544 47 RKQQHIAIFTTAS-LPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRT 125 (562)
Q Consensus 47 ~~~~rI~ivt~~~-~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~ 125 (562)
.++|||+++++.+ +|..+|++.+...++++|.++| |+|+++++.... .. .+ .++..
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G-~eV~vlt~~~~~--~~-~~-~g~~v------------------ 112 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMG-DEVLVVTTDEGV--PQ-EF-HGAKV------------------ 112 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCC-CeEEEEecCCCC--Cc-cc-cCcee------------------
Confidence 5669999998744 4567898999999999999998 999999873210 00 00 01000
Q ss_pred CCCCCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhh
Q 008544 126 GFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKRE 204 (562)
Q Consensus 126 ~~~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~ 204 (562)
.....+.+..+.. . .........+.+.+++.+||+||++++....+. +..+++..+ |+|.++|+....+....
T Consensus 113 ~~~~~~~~~~~~~-~---~~~~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~--~~~~ak~~~ip~V~~~h~~~~~~~~~~ 186 (465)
T PLN02871 113 IGSWSFPCPFYQK-V---PLSLALSPRIISEVARFKPDLIHASSPGIMVFG--ALFYAKLLCVPLVMSYHTHVPVYIPRY 186 (465)
T ss_pred eccCCcCCccCCC-c---eeeccCCHHHHHHHHhCCCCEEEECCCchhHHH--HHHHHHHhCCCEEEEEecCchhhhhcc
Confidence 0000011111110 0 000000124677788899999999987554332 223344444 89999998765554332
Q ss_pred hchHHHHHHHHHHHHHHHHHhccEEEEcChhhhccC-------CCccc-cccccCCCCcCcchhh-hHHhhc-CCCCCcc
Q 008544 205 KNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYP-------NSIVC-NVHGVNPKFLEIGEKK-MEQQQN-GNKAFTK 274 (562)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~-------~~~~~-~v~GVd~~~~~~~~~~-~~~~~~-~~~~~~~ 274 (562)
....+...+. .+.+++.+. +|.++++|+..++.. .+.+. ..+|||.+.|.+.... ..+... +..++.+
T Consensus 187 ~~~~~~~~~~-~~~r~~~~~-ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~ 264 (465)
T PLN02871 187 TFSWLVKPMW-DIIRFLHRA-ADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSEEMRARLSGGEPEKP 264 (465)
T ss_pred cchhhHHHHH-HHHHHHHhh-CCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccccHHHHHHhcCCCCCCe
Confidence 2222222221 223344443 899999998877632 22233 3369998877653322 122222 2234578
Q ss_pred EEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCC--CChHHHHhhcCEEEEc
Q 008544 275 GAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGR--DHADPIFHDYKVFLNP 352 (562)
Q Consensus 275 ~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~--~~~~~l~~~adv~v~p 352 (562)
+|+|+|++.++||++.+++++++ .++++|+|+|+|+..++++++++.. ++.|.|.. +++.++|+.+|++|+|
T Consensus 265 ~i~~vGrl~~~K~~~~li~a~~~----~~~~~l~ivG~G~~~~~l~~~~~~~--~V~f~G~v~~~ev~~~~~~aDv~V~p 338 (465)
T PLN02871 265 LIVYVGRLGAEKNLDFLKRVMER----LPGARLAFVGDGPYREELEKMFAGT--PTVFTGMLQGDELSQAYASGDVFVMP 338 (465)
T ss_pred EEEEeCCCchhhhHHHHHHHHHh----CCCcEEEEEeCChHHHHHHHHhccC--CeEEeccCCHHHHHHHHHHCCEEEEC
Confidence 89999999999999999998854 4689999999999888898887643 46666654 5667999999999999
Q ss_pred cCCCCCcHHHHHHHHcCCcEEeeCCCC-cccccc---CCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH---hcC
Q 008544 353 STTDVVCTATAEALAMGKIVVCANHPS-NDFFKQ---FPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT---HQL 421 (562)
Q Consensus 353 S~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~---~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar---~~~ 421 (562)
|..|+||++++||||||+|||+++.++ .|++.+ +.+|++++ |+++++++|.++++|++. +|+++++ ++|
T Consensus 339 S~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~f 418 (465)
T PLN02871 339 SESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRERMGAAAREEVEKW 418 (465)
T ss_pred CcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999998 899988 99999974 999999999999998875 7888777 789
Q ss_pred CHHHHHHHHHH-HHHhcCccc
Q 008544 422 SWESATERFLQ-VAELVGDVV 441 (562)
Q Consensus 422 sw~~~~~~~~~-~y~~~~~~~ 441 (562)
+|+.+++++++ .|+.+....
T Consensus 419 sw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 419 DWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998 798887443
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-36 Score=314.35 Aligned_cols=350 Identities=15% Similarity=0.106 Sum_probs=244.8
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||+++++.|.|..||.+..+..+++.|.++| |+|+|+++............+++.+ ...+.
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~G-~~V~v~~~~~~~~~~~~~~~~~i~v------------------~~~p~ 61 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKRG-HKVVVITHAYGNRVGIRYLTNGLKV------------------YYLPF 61 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHcC-CeeEEEeccCCcCCCcccccCceeE------------------EEecc
Confidence 6999999999999999999999999999998 9999999732100000000011110 00000
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHH
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRL 209 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~ 209 (562)
.... ..... ......+..+.+.+++.+|||||+|++...... .+..+.+..+ |+|.+.|+.+.... .
T Consensus 62 ~~~~-~~~~~---~~~~~~~~~l~~~~~~~~~DiIh~~~~~~~~~~-~~~~~~~~~~~~~v~t~h~~~~~~~-------~ 129 (398)
T cd03796 62 VVFY-NQSTL---PTFFGTFPLLRNILIRERITIVHGHQAFSALAH-EALLHARTMGLKTVFTDHSLFGFAD-------A 129 (398)
T ss_pred eecc-CCccc---cchhhhHHHHHHHHHhcCCCEEEECCCCchHHH-HHHHHhhhcCCcEEEEecccccccc-------h
Confidence 0000 00000 000112334677777889999999987544211 1222344444 88999997542110 0
Q ss_pred HHHHHHHHHHHHHHHhccEEEEcChhhhcc-------CCCcc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEee
Q 008544 210 QAFLLEFVNSWLARVHCHKVIRLSAATQEY-------PNSIV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGR 281 (562)
Q Consensus 210 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~-------~~~~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr 281 (562)
.......+.++..+ .+|.++++|+..++. ..+.+ ...+|+|...|.+.... .+++.++++|+|+
T Consensus 130 ~~~~~~~~~~~~~~-~~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~-------~~~~~~~i~~~gr 201 (398)
T cd03796 130 SSIHTNKLLRFSLA-DVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSK-------RDNDKITIVVISR 201 (398)
T ss_pred hhHHhhHHHHHhhc-cCCEEEEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCccc-------CCCCceEEEEEec
Confidence 01112222233333 379999999877652 12222 33468988766543221 2344688999999
Q ss_pred ccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCee--EEeCCC--CChHHHHhhcCEEEEccCCCC
Q 008544 282 MVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVV--RVYPGR--DHADPIFHDYKVFLNPSTTDV 357 (562)
Q Consensus 282 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~--~~~~~~--~~~~~l~~~adv~v~pS~~E~ 357 (562)
+.++||++.+++++..+.++.|+++|+++|+|+..+.+++.++++++.. .+.+.. +++.++|+.+|++++||..|+
T Consensus 202 l~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~ 281 (398)
T cd03796 202 LVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEA 281 (398)
T ss_pred cchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhc
Confidence 9999999999999999988889999999999998889999999988764 445543 456699999999999999999
Q ss_pred CcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeCCHHHHHHHHHHHHhCCCC--CccHHHH----hcCCHHHHHHHH
Q 008544 358 VCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYDGRNGFVEATLKALAEEPA--QPTDAQT----HQLSWESATERF 430 (562)
Q Consensus 358 ~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw~~~~~~~ 430 (562)
||++++||||||+|||+++.++ .|++.++..++..+|+++++++|.+++++... .+.++++ ++|||+.+++++
T Consensus 282 ~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~ 361 (398)
T cd03796 282 FCIAIVEAASCGLLVVSTRVGGIPEVLPPDMILLAEPDVESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSWEDVAKRT 361 (398)
T ss_pred cCHHHHHHHHcCCCEEECCCCCchhheeCCceeecCCCHHHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCCHHHHHHHH
Confidence 9999999999999999999998 89998776555556999999999999997654 3444444 889999999999
Q ss_pred HHHHHhcCc
Q 008544 431 LQVAELVGD 439 (562)
Q Consensus 431 ~~~y~~~~~ 439 (562)
+++|+....
T Consensus 362 ~~~y~~l~~ 370 (398)
T cd03796 362 EKVYDRILQ 370 (398)
T ss_pred HHHHHHHhc
Confidence 999998763
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=304.60 Aligned_cols=373 Identities=14% Similarity=0.044 Sum_probs=247.1
Q ss_pred CeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHh-hhccCCC
Q 008544 50 QHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWL-EDRTGFT 128 (562)
Q Consensus 50 ~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~-~~~~~~~ 128 (562)
|||++++..|+|..+|++.++..++++|.++| |+|+|+|+... ||.......... ..+..... ..++...
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G-~~V~vit~~~~-------~~~~~~~~~~~~-~~~~~~~~~~i~v~r~ 71 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAARG-HEVRVITAPPY-------YPQWRVGEGYSA-WRYRRESEGGVTVWRC 71 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHCC-CeEEEEecCCC-------CCCCCCCccccc-ccceeeecCCeEEEEc
Confidence 68999999999999999999999999999998 99999997311 111000000000 00000000 0000000
Q ss_pred CCcccccccccchhccch-hhhH---HhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhh
Q 008544 129 STFDTRFYPGKFAADKKS-ILAV---GDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKR 203 (562)
Q Consensus 129 ~~~~i~~y~~r~~~~~~~-~~~~---~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~ 203 (562)
+.. ....+......... .+.+ ..+.+.++ .+||+||++++...... .+..++++.+ |++.++|+.+++....
T Consensus 72 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Div~~~~p~~~~~~-~~~~~~~~~~~~~v~~~~d~~~~~~~~ 148 (412)
T PRK10307 72 PLY-VPKQPSGLKRLLHLGSFALSSFFPLLAQRR-WRPDRVIGVVPTLFCAP-GARLLARLSGARTWLHIQDYEVDAAFG 148 (412)
T ss_pred ccc-CCCCccHHHHHHHHHHHHHHHHHHHhhccC-CCCCEEEEeCCcHHHHH-HHHHHHHhhCCCEEEEeccCCHHHHHH
Confidence 000 00000000000000 0011 11222222 68999999987655322 1233444444 7888888765443211
Q ss_pred hh--chHHHHHHHHHHHHHHHHHhccEEEEcChhhhccC------CCcc-ccccccCCCCcCcchh---hhHHhhcCCCC
Q 008544 204 EK--NDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYP------NSIV-CNVHGVNPKFLEIGEK---KMEQQQNGNKA 271 (562)
Q Consensus 204 ~~--~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~------~~~~-~~v~GVd~~~~~~~~~---~~~~~~~~~~~ 271 (562)
.+ .+.....+...+.+++.+. +|.++++|+..++.. .+.+ +..||+|.+.|.+... ...+...+.++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~-ad~ii~~S~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~ 227 (412)
T PRK10307 149 LGLLKGGKVARLATAFERSLLRR-FDNVSTISRSMMNKAREKGVAAEKVIFFPNWSEVARFQPVADADVDALRAQLGLPD 227 (412)
T ss_pred hCCccCcHHHHHHHHHHHHHHhh-CCEEEecCHHHHHHHHHcCCCcccEEEECCCcCHhhcCCCCccchHHHHHHcCCCC
Confidence 11 1111122333344444443 899999998887732 1223 2337999876654322 12344566667
Q ss_pred CccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe-eEEeCCC--CChHHHHhhcCE
Q 008544 272 FTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV-VRVYPGR--DHADPIFHDYKV 348 (562)
Q Consensus 272 ~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~-~~~~~~~--~~~~~l~~~adv 348 (562)
+.++++|+|++.++||++.+++|++.+. +.++++|+|+|+|+..+++++.++.+++. +.++|.. ++..++|+.||+
T Consensus 228 ~~~~i~~~G~l~~~kg~~~li~a~~~l~-~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~aDi 306 (412)
T PRK10307 228 GKKIVLYSGNIGEKQGLELVIDAARRLR-DRPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMADC 306 (412)
T ss_pred CCEEEEEcCccccccCHHHHHHHHHHhc-cCCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhcCE
Confidence 7789999999999999999999999885 45789999999999999999999988775 4445543 355589999999
Q ss_pred EEEccCCCC----CcHHHHHHHHcCCcEEeeCCCC---ccccccCCceEee--CCHHHHHHHHHHHHhCCCC--CccHHH
Q 008544 349 FLNPSTTDV----VCTATAEALAMGKIVVCANHPS---NDFFKQFPNCRTY--DGRNGFVEATLKALAEEPA--QPTDAQ 417 (562)
Q Consensus 349 ~v~pS~~E~----~~~~~lEAma~G~PVI~t~~~~---~e~v~~~~~g~~~--~d~~~la~~i~~ll~~~~~--~l~~~a 417 (562)
+++||..|+ +|.+++||||||+|||+|+.++ .+++. .+|+++ +|+++++++|.++++|+.. .|++++
T Consensus 307 ~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a 384 (412)
T PRK10307 307 HLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQALLRPKLGTVA 384 (412)
T ss_pred eEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 999999888 6888999999999999998875 46666 588887 4999999999999998875 888887
Q ss_pred H----hcCCHHHHHHHHHHHHHhcC
Q 008544 418 T----HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 418 r----~~~sw~~~~~~~~~~y~~~~ 438 (562)
+ ++|||+.+++++.++|+...
T Consensus 385 ~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 385 REYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 7 68999999999999999766
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=307.77 Aligned_cols=367 Identities=17% Similarity=0.138 Sum_probs=241.4
Q ss_pred CeEEEEecccCCC--cccccccHHHHHHHHHHcCCCeEEEEeecCCcccccc-----c-------------cCCCceeCC
Q 008544 50 QHIAIFTTASLPW--LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQ-----V-------------YPGNITFAS 109 (562)
Q Consensus 50 ~rI~ivt~~~~P~--~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~-----~-------------~p~~i~~~~ 109 (562)
|||++|+..+.|. .||.+..+..|+++|+++| |+|+|++|++....... + ..+++++.-
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G-~~V~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~ 79 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALG-HDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGDGVPVYL 79 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCC-CcEEEEecCCcchhhhhcCceEEEEeeeEEEEEEeEEcCCceEEE
Confidence 6899999888888 7899999999999999998 99999999764321110 0 001111110
Q ss_pred chhhHHHHHHHhhhccCCCCCcccccccccchhccchhhhHHhHHhhcC--cCCCcEEEecCCchhhhhhchHHHHhh--
Q 008544 110 PKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIP--DEEADIAVLEEPEHLTWFHHGKRWKAK-- 185 (562)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~--~~~pDvV~~~~~~~~~~~~~~~~~~~~-- 185 (562)
.+. ..+ + ..-.+..++. ...+..+-.....++++ ..+|||||+|.+... +. +..++..
T Consensus 80 v~~-~~~----------~-~~~~~y~~~d---~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~-~~--~~~l~~~~~ 141 (466)
T PRK00654 80 IDA-PHL----------F-DRPSGYGYPD---NGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTG-LI--PALLKEKYW 141 (466)
T ss_pred EeC-HHH----------c-CCCCCCCCcC---hHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHH-HH--HHHHHHhhh
Confidence 000 000 0 0000000110 00000000011222222 358999999986543 33 2223322
Q ss_pred ----cCCEEEEEcCCcHHH------Hhhhhch--HH-HHHHH----HHHHHHHHHHhccEEEEcChhhhccC--------
Q 008544 186 ----FRFVVGIVHTNYLEY------VKREKND--RL-QAFLL----EFVNSWLARVHCHKVIRLSAATQEYP-------- 240 (562)
Q Consensus 186 ----~~~vi~~~h~~~~~~------~~~~~~~--~~-~~~~~----~~~~~~~~~~~ad~vi~~S~~~~~~~-------- 240 (562)
..|+|.++|+....- ....+.. .+ ...+. ..+.+...+ +||.|+++|+..++..
T Consensus 142 ~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ad~vitvS~~~~~ei~~~~~~~g 220 (466)
T PRK00654 142 RGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLY-YADRVTTVSPTYAREITTPEFGYG 220 (466)
T ss_pred ccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHH-hcCcCeeeCHHHHHHhccccCCcC
Confidence 138999999752110 0000000 00 00000 000111122 4899999998765521
Q ss_pred --------C-CccccccccCCCCcCcchh-------------------hhHHhhcCCCC-CccEEEEEeeccccCCHHHH
Q 008544 241 --------N-SIVCNVHGVNPKFLEIGEK-------------------KMEQQQNGNKA-FTKGAYYIGRMVWSKGYEEL 291 (562)
Q Consensus 241 --------~-~~~~~v~GVd~~~~~~~~~-------------------~~~~~~~~~~~-~~~~il~vGr~~~~Kg~~~l 291 (562)
. +.....||||.+.|.|... ...++..++++ +.++++|+||+.++||++.+
T Consensus 221 l~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~l 300 (466)
T PRK00654 221 LEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLV 300 (466)
T ss_pred hHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHH
Confidence 1 2223457999988766421 12244456653 57899999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEEEeCCCC--HHHHHHHHHhcCCeeEEeCCCCCh--HHHHhhcCEEEEccCCCCCcHHHHHHHH
Q 008544 292 LGLLNIYHKELAGLEMDLYGNGED--FDQIQRAAKKLKLVVRVYPGRDHA--DPIFHDYKVFLNPSTTDVVCTATAEALA 367 (562)
Q Consensus 292 l~a~~~l~~~~~~~~l~ivG~g~~--~~~l~~~~~~l~l~~~~~~~~~~~--~~l~~~adv~v~pS~~E~~~~~~lEAma 367 (562)
++|++++.++ +++|+|+|+|+. .+++++++++++.++.++.++++. ..+|+.||++|+||.+|+||++++|||+
T Consensus 301 i~a~~~l~~~--~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma 378 (466)
T PRK00654 301 LEALPELLEQ--GGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALR 378 (466)
T ss_pred HHHHHHHHhc--CCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHH
Confidence 9999998764 799999999864 478888888888776666555432 3789999999999999999999999999
Q ss_pred cCCcEEeeCCCC-ccccccC------CceEeeC--CHHHHHHHHHHHHh---CCCC--CccHHHH-hcCCHHHHHHHHHH
Q 008544 368 MGKIVVCANHPS-NDFFKQF------PNCRTYD--GRNGFVEATLKALA---EEPA--QPTDAQT-HQLSWESATERFLQ 432 (562)
Q Consensus 368 ~G~PVI~t~~~~-~e~v~~~------~~g~~~~--d~~~la~~i~~ll~---~~~~--~l~~~ar-~~~sw~~~~~~~~~ 432 (562)
||+|+|+++.|| .|.+.++ .+|++++ |+++++++|.++++ +++. +|++++. +.|||+.+++++.+
T Consensus 379 ~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~ 458 (466)
T PRK00654 379 YGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAMAQDFSWDKSAEEYLE 458 (466)
T ss_pred CCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCChHHHHHHHHH
Confidence 999999999998 8999887 8999984 99999999999887 3333 6666666 88999999999999
Q ss_pred HHHhcC
Q 008544 433 VAELVG 438 (562)
Q Consensus 433 ~y~~~~ 438 (562)
+|+...
T Consensus 459 lY~~~~ 464 (466)
T PRK00654 459 LYRRLL 464 (466)
T ss_pred HHHHHh
Confidence 998754
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=300.56 Aligned_cols=363 Identities=16% Similarity=0.104 Sum_probs=244.0
Q ss_pred EEEEecccCCCc-------ccccccHHHHHHHHHHcCCCeEEEEeecCCcccccccc-CCCceeCCchhhHHHHHHHhhh
Q 008544 52 IAIFTTASLPWL-------TGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVY-PGNITFASPKEQEAYVRWWLED 123 (562)
Q Consensus 52 I~ivt~~~~P~~-------~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~-p~~i~~~~~~~~~~~~~~~~~~ 123 (562)
|+++++..+|+. ||++.++.+++++|.++| |+|++++++.......... -+++++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G-~~V~v~~~~~~~~~~~~~~~~~~~~v~~-------------- 65 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRG-IEVDIFTRATRPSQPPVVEVAPGVRVRN-------------- 65 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCC-CEEEEEecccCCCCCCccccCCCcEEEE--------------
Confidence 678888888876 899999999999999998 9999999843211110000 01111110
Q ss_pred ccCCCCCcccccccc-cchhccchhhhHHhHHhhcC--cCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHH
Q 008544 124 RTGFTSTFDTRFYPG-KFAADKKSILAVGDITEIIP--DEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLE 199 (562)
Q Consensus 124 ~~~~~~~~~i~~y~~-r~~~~~~~~~~~~~l~~~i~--~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~ 199 (562)
... ........ ++.... ..+....+..+++ ..+||+||+|..... +. +..+.+..+ |.|.++|+.+..
T Consensus 66 -~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Diih~h~~~~~-~~--~~~~~~~~~~p~v~t~h~~~~~ 137 (405)
T TIGR03449 66 -VVA---GPYEGLDKEDLPTQL-CAFTGGVLRAEARHEPGYYDLIHSHYWLSG-QV--GWLLRDRWGVPLVHTAHTLAAV 137 (405)
T ss_pred -ecC---CCcccCCHHHHHHHH-HHHHHHHHHHHhhccCCCCCeEEechHHHH-HH--HHHHHHhcCCCEEEeccchHHH
Confidence 000 00000000 000000 0000111223333 347999999984432 22 222334344 899999975422
Q ss_pred HHhhhhc-hHHHHHHHHHHHHHHHHHhccEEEEcChhhhcc-------CCCcc-ccccccCCCCcCcchhhhHHhhcCCC
Q 008544 200 YVKREKN-DRLQAFLLEFVNSWLARVHCHKVIRLSAATQEY-------PNSIV-CNVHGVNPKFLEIGEKKMEQQQNGNK 270 (562)
Q Consensus 200 ~~~~~~~-~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~-------~~~~~-~~v~GVd~~~~~~~~~~~~~~~~~~~ 270 (562)
....... ........+...+.+.+ .+|.++++|+..++. ..+.+ ...+|+|.+.+.+......+...+++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~e~~~~~-~~d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~ 216 (405)
T TIGR03449 138 KNAALADGDTPEPEARRIGEQQLVD-NADRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRATERARLGLP 216 (405)
T ss_pred HHHhccCCCCCchHHHHHHHHHHHH-hcCeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCcHHHHHHhcCCC
Confidence 1111000 00001122222233333 379999999875541 11223 33479998777655444445556666
Q ss_pred CCccEEEEEeeccccCCHHHHHHHHHHHHHhcCC--cEEEEEeC----C-CCHHHHHHHHHhcCCe--eEEeCCC--CCh
Q 008544 271 AFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAG--LEMDLYGN----G-EDFDQIQRAAKKLKLV--VRVYPGR--DHA 339 (562)
Q Consensus 271 ~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~--~~l~ivG~----g-~~~~~l~~~~~~l~l~--~~~~~~~--~~~ 339 (562)
++.++++|+|++.+.||++.++++++.+.++.|+ ++|+++|. | +..+++++.++++++. +.+.+.. ++.
T Consensus 217 ~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~ 296 (405)
T TIGR03449 217 LDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEEL 296 (405)
T ss_pred CCCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHH
Confidence 6788999999999999999999999999887776 99999996 3 3457888888888875 4444443 445
Q ss_pred HHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--Ccc
Q 008544 340 DPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPT 414 (562)
Q Consensus 340 ~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~ 414 (562)
.++|+.+|++++||..|+||++++|||+||+|||+++.++ .|++.++.+|++++ |+++++++|.+++++++. +|+
T Consensus 297 ~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~ 376 (405)
T TIGR03449 297 VHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMG 376 (405)
T ss_pred HHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHH
Confidence 5899999999999999999999999999999999999998 99999999999985 999999999999998764 777
Q ss_pred HHHH---hcCCHHHHHHHHHHHHHhcC
Q 008544 415 DAQT---HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 415 ~~ar---~~~sw~~~~~~~~~~y~~~~ 438 (562)
++++ ++|+|+.+++++.++|....
T Consensus 377 ~~~~~~~~~fsw~~~~~~~~~~y~~~~ 403 (405)
T TIGR03449 377 AAAVEHAAGFSWAATADGLLSSYRDAL 403 (405)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 7666 68999999999999998654
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-34 Score=295.69 Aligned_cols=350 Identities=17% Similarity=0.171 Sum_probs=245.7
Q ss_pred CeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCC
Q 008544 50 QHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTS 129 (562)
Q Consensus 50 ~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (562)
|||++++. |..||++.....++++|.++| |+|++++..... ......+ ++.+.. .+...
T Consensus 1 mki~~~~~---p~~gG~~~~~~~la~~L~~~G-~~v~v~~~~~~~-~~~~~~~-~~~~~~-------------~~~~~-- 59 (371)
T cd04962 1 MKIGIVCY---PTYGGSGVVATELGKALARRG-HEVHFITSSRPF-RLDEYSP-NIFFHE-------------VEVPQ-- 59 (371)
T ss_pred CceeEEEE---eCCCCccchHHHHHHHHHhcC-CceEEEecCCCc-chhhhcc-CeEEEE-------------ecccc--
Confidence 58999973 778999999999999999998 999999872110 0000000 111000 00000
Q ss_pred CcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhc-hHHHHhh-cCCEEEEEcCCcHHHHhhhhch
Q 008544 130 TFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHH-GKRWKAK-FRFVVGIVHTNYLEYVKREKND 207 (562)
Q Consensus 130 ~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~-~~~~~~~-~~~vi~~~h~~~~~~~~~~~~~ 207 (562)
......+. ........+.+.+++.+||+||+|.+....+... ...+..+ ..|++.++|...........
T Consensus 60 -~~~~~~~~------~~~~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-- 130 (371)
T cd04962 60 -YPLFQYPP------YDLALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITLVGQDP-- 130 (371)
T ss_pred -cchhhcch------hHHHHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccccccccc--
Confidence 00000000 0111234577788889999999987543211111 1111111 23889899965322111100
Q ss_pred HHHHHHHHHHHHHHHHHhccEEEEcChhhhccC------CCcc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEe
Q 008544 208 RLQAFLLEFVNSWLARVHCHKVIRLSAATQEYP------NSIV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIG 280 (562)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~------~~~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vG 280 (562)
....+.+...+ .+|.++++|+..++.. .+.+ ...+|++...+.+..........+.+++.++++|+|
T Consensus 131 -----~~~~~~~~~~~-~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g 204 (371)
T cd04962 131 -----SFQPATRFSIE-KSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPDEALKRRLGAPEGEKVLIHIS 204 (371)
T ss_pred -----cchHHHHHHHh-hCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCchHHHHHhcCCCCCCeEEEEec
Confidence 11112222223 3799999998877631 2222 333688876665444333344556666788899999
Q ss_pred eccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCCCChHHHHhhcCEEEEccCCCCC
Q 008544 281 RMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGRDHADPIFHDYKVFLNPSTTDVV 358 (562)
Q Consensus 281 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~~~~~~l~~~adv~v~pS~~E~~ 358 (562)
++.+.||++.+++++..+.++ ++++|+++|.|++.+.+++.++++++. +.+++..+++.++|+.+|++|+||..|++
T Consensus 205 ~l~~~K~~~~li~a~~~l~~~-~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~v~ps~~E~~ 283 (371)
T cd04962 205 NFRPVKRIDDVIRIFAKVRKE-VPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQDHVEELLSIADLFLLPSEKESF 283 (371)
T ss_pred ccccccCHHHHHHHHHHHHhc-CCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCcccHHHHHHhcCEEEeCCCcCCC
Confidence 999999999999999998765 569999999999999999998888764 55677788888999999999999999999
Q ss_pred cHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH----hcCCHHHHHHH
Q 008544 359 CTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT----HQLSWESATER 429 (562)
Q Consensus 359 ~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw~~~~~~ 429 (562)
|++++|||+||+|||+|+.++ .|++.++.+|++++ |+++++++|.++++++.. .|+++++ ++|+|+.++++
T Consensus 284 ~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~ 363 (371)
T cd04962 284 GLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSERIVPQ 363 (371)
T ss_pred ccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 999999999999999999998 99999999999975 999999999999998775 6777666 68999999999
Q ss_pred HHHHHHh
Q 008544 430 FLQVAEL 436 (562)
Q Consensus 430 ~~~~y~~ 436 (562)
+.+.|+.
T Consensus 364 ~~~~y~~ 370 (371)
T cd04962 364 YEALYRR 370 (371)
T ss_pred HHHHHHh
Confidence 9999975
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=287.60 Aligned_cols=347 Identities=18% Similarity=0.189 Sum_probs=247.4
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||++++..++|..+|++..+..++++|.++| |+|+++++.... ....+.... ... .
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g-~~v~~~~~~~~~--~~~~~~~~~------------------~~~---~ 56 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARG-HEVLVIAPGPFR--ESEGPARVV------------------PVP---S 56 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCC-CEEEEEeCCchh--hccCCCCce------------------eec---c
Confidence 6999999999998999999999999999998 999999883211 000000000 000 0
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHH
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRL 209 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~ 209 (562)
.....+.. ..........+.+.+++.+||+||++.+....+. +..+.++.+ |++..+|+.+..+.........
T Consensus 57 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~pdii~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 130 (364)
T cd03814 57 VPLPGYPE----IRLALPPRRRVRRLLDAFAPDVVHIATPGPLGLA--ALRAARRLGIPVVTSYHTDFPEYLRYYGLGPL 130 (364)
T ss_pred cccCcccc----eEecccchhhHHHHHHhcCCCEEEEeccchhhHH--HHHHHHHcCCCEEEEEecChHHHhhhcccchH
Confidence 00000000 0000111334666778889999999987665444 344555555 8999999887765543322222
Q ss_pred HHHHHHHHHHHHHHHhccEEEEcChhhhccCC----Cc-cccccccCCCCcCcchhhh-HHhhcCCCCCccEEEEEeecc
Q 008544 210 QAFLLEFVNSWLARVHCHKVIRLSAATQEYPN----SI-VCNVHGVNPKFLEIGEKKM-EQQQNGNKAFTKGAYYIGRMV 283 (562)
Q Consensus 210 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~----~~-~~~v~GVd~~~~~~~~~~~-~~~~~~~~~~~~~il~vGr~~ 283 (562)
.. ....+.+++.+. +|.+++.|+..++... .. ....+|+|.+.+.+..... .....+ ..+.+.++|+|++.
T Consensus 131 ~~-~~~~~~~~~~~~-~d~i~~~s~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~ 207 (364)
T cd03814 131 SW-LAWAYLRWFHNR-ADRVLVPSPSLADELRARGFRRVRLWPRGVDTELFHPRRRDEALRARLG-PPDRPVLLYVGRLA 207 (364)
T ss_pred hH-hhHHHHHHHHHh-CCEEEeCCHHHHHHHhccCCCceeecCCCccccccCcccccHHHHHHhC-CCCCeEEEEEeccc
Confidence 22 212333333333 7999999988877322 11 2223588887765543322 122222 34467899999999
Q ss_pred ccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCC--CCChHHHHhhcCEEEEccCCCCCcHH
Q 008544 284 WSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPG--RDHADPIFHDYKVFLNPSTTDVVCTA 361 (562)
Q Consensus 284 ~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~--~~~~~~l~~~adv~v~pS~~E~~~~~ 361 (562)
+.||++.+++++.++..+ ++++|+++|.|++.+.++ ....++.+++. .++..++|+.||++++||..|++|++
T Consensus 208 ~~k~~~~~i~~~~~l~~~-~~~~l~i~G~~~~~~~~~----~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~ 282 (364)
T cd03814 208 PEKNLEALLDADLPLRRR-PPVRLVIVGDGPARARLE----ARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLV 282 (364)
T ss_pred cccCHHHHHHHHHHhhhc-CCceEEEEeCCchHHHHh----ccCCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcH
Confidence 999999999999999877 899999999988776665 33345666664 45666999999999999999999999
Q ss_pred HHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH---hcCCHHHHHHHHHHH
Q 008544 362 TAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT---HQLSWESATERFLQV 433 (562)
Q Consensus 362 ~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar---~~~sw~~~~~~~~~~ 433 (562)
++||||||+|||+++.++ .+++.++.+|++++ |.++++++|.++++|++. +|+++++ ++|+|+.+.+++++.
T Consensus 283 ~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (364)
T cd03814 283 VLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARARAEAERRSWEAFLDNLLEA 362 (364)
T ss_pred HHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHh
Confidence 999999999999999998 89999989999874 888899999999998886 7777777 589999999999998
Q ss_pred HH
Q 008544 434 AE 435 (562)
Q Consensus 434 y~ 435 (562)
|+
T Consensus 363 ~~ 364 (364)
T cd03814 363 YR 364 (364)
T ss_pred hC
Confidence 84
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=290.58 Aligned_cols=345 Identities=12% Similarity=0.102 Sum_probs=239.3
Q ss_pred CeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCC
Q 008544 50 QHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTS 129 (562)
Q Consensus 50 ~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (562)
++|+.+...+ ..||++.....++++|.+.| |++++++.... +. +. ...... .+..
T Consensus 2 ~~il~ii~~~--~~GG~e~~~~~l~~~l~~~~-~~~~v~~~~~~--~~---~~------------~~~~~~---~i~~-- 56 (374)
T TIGR03088 2 PLIVHVVYRF--DVGGLENGLVNLINHLPADR-YRHAVVALTEV--SA---FR------------KRIQRP---DVAF-- 56 (374)
T ss_pred ceEEEEeCCC--CCCcHHHHHHHHHhhccccc-cceEEEEcCCC--Ch---hH------------HHHHhc---CceE--
Confidence 6899998876 35888889999999999987 99988874110 00 00 000000 0000
Q ss_pred CcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-C-EEEEEcCCcHHHHhhhhch
Q 008544 130 TFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-F-VVGIVHTNYLEYVKREKND 207 (562)
Q Consensus 130 ~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~-vi~~~h~~~~~~~~~~~~~ 207 (562)
..+...+ ......+..+.+++++.+|||||+|+.... . +...+...+ + .+.+.|.... +. ... .
T Consensus 57 -~~~~~~~------~~~~~~~~~l~~~l~~~~~Divh~~~~~~~--~--~~~~~~~~~~~~~i~~~h~~~~-~~-~~~-~ 122 (374)
T TIGR03088 57 -YALHKQP------GKDVAVYPQLYRLLRQLRPDIVHTRNLAAL--E--AQLPAALAGVPARIHGEHGRDV-FD-LDG-S 122 (374)
T ss_pred -EEeCCCC------CCChHHHHHHHHHHHHhCCCEEEEcchhHH--H--HHHHHHhcCCCeEEEeecCccc-cc-chh-h
Confidence 0010000 011112445778888999999999976443 1 111222222 3 3334442211 00 000 0
Q ss_pred HHHHHHHHHHHHHHHHHhccEEEEcChhhhccC-------CCcc-ccccccCCCCcCcchhh--hHHhhcCCCCCccEEE
Q 008544 208 RLQAFLLEFVNSWLARVHCHKVIRLSAATQEYP-------NSIV-CNVHGVNPKFLEIGEKK--MEQQQNGNKAFTKGAY 277 (562)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~-------~~~~-~~v~GVd~~~~~~~~~~--~~~~~~~~~~~~~~il 277 (562)
......+.++..+. +|.++++|+..++.. .+.+ ...+|+|.+.+.+.... .........++.++++
T Consensus 123 ---~~~~~~~~~~~~~~-~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 198 (374)
T TIGR03088 123 ---NWKYRWLRRLYRPL-IHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADESVVVG 198 (374)
T ss_pred ---HHHHHHHHHHHHhc-CCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHhhcCCCCCeEEE
Confidence 11122233333333 799999998877732 2222 33469998777654211 1112223345577999
Q ss_pred EEeeccccCCHHHHHHHHHHHHHhcC----CcEEEEEeCCCCHHHHHHHHHhcCCeeE--EeCCCCChHHHHhhcCEEEE
Q 008544 278 YIGRMVWSKGYEELLGLLNIYHKELA----GLEMDLYGNGEDFDQIQRAAKKLKLVVR--VYPGRDHADPIFHDYKVFLN 351 (562)
Q Consensus 278 ~vGr~~~~Kg~~~ll~a~~~l~~~~~----~~~l~ivG~g~~~~~l~~~~~~l~l~~~--~~~~~~~~~~l~~~adv~v~ 351 (562)
|+||+.++||++.+++++.++.++.+ +++|+++|+|+..+++++.++++++... +.+..++..++|+.+|++|+
T Consensus 199 ~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ 278 (374)
T TIGR03088 199 TVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVL 278 (374)
T ss_pred EEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCCcCCHHHHHHhcCEEEe
Confidence 99999999999999999999987765 6899999999988999999999887643 34567888899999999999
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEee--CCHHHHHHHHHHHHhCCCC--CccHHHH----hcCC
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTY--DGRNGFVEATLKALAEEPA--QPTDAQT----HQLS 422 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~--~d~~~la~~i~~ll~~~~~--~l~~~ar----~~~s 422 (562)
||..|+||++++|||+||+|||+|+.++ .|++.++.+|+++ +|+++++++|.++++++.. .|+++++ ++|+
T Consensus 279 pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs 358 (374)
T TIGR03088 279 PSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQFS 358 (374)
T ss_pred ccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999998 9999999999987 4999999999999998765 6777665 7999
Q ss_pred HHHHHHHHHHHHHhc
Q 008544 423 WESATERFLQVAELV 437 (562)
Q Consensus 423 w~~~~~~~~~~y~~~ 437 (562)
|+.+++++.++|+..
T Consensus 359 ~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 359 INAMVAAYAGLYDQL 373 (374)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999864
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=297.16 Aligned_cols=376 Identities=15% Similarity=0.153 Sum_probs=243.0
Q ss_pred CeEEEEecccCCC--cccccccHHHHHHHHHHcCCCeEEEEeecCCccccccc------cCCCceeCCchhhHHHHHHHh
Q 008544 50 QHIAIFTTASLPW--LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQV------YPGNITFASPKEQEAYVRWWL 121 (562)
Q Consensus 50 ~rI~ivt~~~~P~--~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~------~p~~i~~~~~~~~~~~~~~~~ 121 (562)
|||+++|.-+.|+ .||.+.....|+++|+++| |+|.|++|.+........ ....+.+.... ..++.|.
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G-~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 76 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALG-HDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRT---LYVKVFE 76 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcC-CeEEEEecCCcChhhhhccCeEEEEEEEEeecCce---eEEEEEE
Confidence 6899999888887 7899999999999999998 999999997744221100 00000000000 0000000
Q ss_pred ----hhccCCCCC---ccc--ccccccc-hhccchhhhHHhHHhhcC--cCCCcEEEecCCchhhhhhchHHHHhhc---
Q 008544 122 ----EDRTGFTST---FDT--RFYPGKF-AADKKSILAVGDITEIIP--DEEADIAVLEEPEHLTWFHHGKRWKAKF--- 186 (562)
Q Consensus 122 ----~~~~~~~~~---~~i--~~y~~r~-~~~~~~~~~~~~l~~~i~--~~~pDvV~~~~~~~~~~~~~~~~~~~~~--- 186 (562)
..++.+... +.- ..|..-+ ....+..+-.....++++ ..+|||||+|++... .. +..++...
T Consensus 77 ~~~~~v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~-~~--~~~l~~~~~~~ 153 (473)
T TIGR02095 77 GVVEGVPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTA-LV--PALLKAVYRPN 153 (473)
T ss_pred EEECCceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHH-HH--HHHHHhhccCC
Confidence 000000000 000 0111000 000011111111222332 468999999986543 22 22233322
Q ss_pred -CCEEEEEcCCcHHH-H-----hhhhch--HHH-HH-----HHHHHHHHHHHHhccEEEEcChhhhccC-----------
Q 008544 187 -RFVVGIVHTNYLEY-V-----KREKND--RLQ-AF-----LLEFVNSWLARVHCHKVIRLSAATQEYP----------- 240 (562)
Q Consensus 187 -~~vi~~~h~~~~~~-~-----~~~~~~--~~~-~~-----~~~~~~~~~~~~~ad~vi~~S~~~~~~~----------- 240 (562)
.|.|.++|+....- . ...+.. ... .. ....+ +...+ +||.++++|+..++..
T Consensus 154 ~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-k~~~~-~ad~v~tVS~~~~~ei~~~~~~~~l~~ 231 (473)
T TIGR02095 154 PIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFL-KGGIV-YADRVTTVSPTYAREILTPEFGYGLDG 231 (473)
T ss_pred CCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHH-HHHHH-hCCcCeecCHhHHHHhcCCcCCccchh
Confidence 48999999653110 0 000000 000 00 00011 11122 4899999998765521
Q ss_pred ------CCccccccccCCCCcCcchh-------------------hhHHhhcCCCC--CccEEEEEeeccccCCHHHHHH
Q 008544 241 ------NSIVCNVHGVNPKFLEIGEK-------------------KMEQQQNGNKA--FTKGAYYIGRMVWSKGYEELLG 293 (562)
Q Consensus 241 ------~~~~~~v~GVd~~~~~~~~~-------------------~~~~~~~~~~~--~~~~il~vGr~~~~Kg~~~ll~ 293 (562)
.+.....||||.+.|.|... ...++..+++. +.++++|+||+.++||++.+++
T Consensus 232 ~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~ 311 (473)
T TIGR02095 232 VLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLA 311 (473)
T ss_pred HHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHH
Confidence 12234457999988775421 12344556654 6789999999999999999999
Q ss_pred HHHHHHHhcCCcEEEEEeCCC--CHHHHHHHHHhcCCeeEEeCCCCCh--HHHHhhcCEEEEccCCCCCcHHHHHHHHcC
Q 008544 294 LLNIYHKELAGLEMDLYGNGE--DFDQIQRAAKKLKLVVRVYPGRDHA--DPIFHDYKVFLNPSTTDVVCTATAEALAMG 369 (562)
Q Consensus 294 a~~~l~~~~~~~~l~ivG~g~--~~~~l~~~~~~l~l~~~~~~~~~~~--~~l~~~adv~v~pS~~E~~~~~~lEAma~G 369 (562)
|+.++.++ +++|+|+|+|+ ..+++++++++++.++.++++.++. ..+|+.+|++++||.+|+||++++|||+||
T Consensus 312 a~~~l~~~--~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G 389 (473)
T TIGR02095 312 ALPELLEL--GGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG 389 (473)
T ss_pred HHHHHHHc--CcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCC
Confidence 99999765 59999999985 3577888888777667777665543 479999999999999999999999999999
Q ss_pred CcEEeeCCCC-ccccccC------CceEeeC--CHHHHHHHHHHHHh----CCCC--CccHHHH-hcCCHHHHHHHHHHH
Q 008544 370 KIVVCANHPS-NDFFKQF------PNCRTYD--GRNGFVEATLKALA----EEPA--QPTDAQT-HQLSWESATERFLQV 433 (562)
Q Consensus 370 ~PVI~t~~~~-~e~v~~~------~~g~~~~--d~~~la~~i~~ll~----~~~~--~l~~~ar-~~~sw~~~~~~~~~~ 433 (562)
+|||+++.++ .|++.++ .+|++++ |+++++++|.+++. +++. +|++++. +.|||+++++++.++
T Consensus 390 ~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~ 469 (473)
T TIGR02095 390 TVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAMSQDFSWDKSAKQYVEL 469 (473)
T ss_pred CCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCcHHHHHHHHHH
Confidence 9999999998 9999888 8999984 99999999999887 5553 7777776 789999999999999
Q ss_pred HHh
Q 008544 434 AEL 436 (562)
Q Consensus 434 y~~ 436 (562)
|+.
T Consensus 470 Y~~ 472 (473)
T TIGR02095 470 YRS 472 (473)
T ss_pred HHh
Confidence 985
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=274.46 Aligned_cols=352 Identities=17% Similarity=0.179 Sum_probs=247.7
Q ss_pred CeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccc-c-CCCceeCCchhhHHHHHHHhhhccCC
Q 008544 50 QHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQV-Y-PGNITFASPKEQEAYVRWWLEDRTGF 127 (562)
Q Consensus 50 ~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~-~-p~~i~~~~~~~~~~~~~~~~~~~~~~ 127 (562)
.+|++|++.|+|..||++.+++.+++.|.+.| |.|.+++..+.. +..+ | .++.++...+. .+..
T Consensus 1 ~~i~mVsdff~P~~ggveshiy~lSq~li~lg-hkVvvithayg~--r~girylt~glkVyylp~-----------~v~~ 66 (426)
T KOG1111|consen 1 SRILMVSDFFYPSTGGVESHIYALSQCLIRLG-HKVVVITHAYGN--RVGIRYLTNGLKVYYLPA-----------VVGY 66 (426)
T ss_pred CcceeeCcccccCCCChhhhHHHhhcchhhcC-CeEEEEeccccC--ccceeeecCCceEEEEee-----------eeee
Confidence 37999999999999999999999999999998 999999985532 2211 1 12222111111 0000
Q ss_pred CCCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhc-hHHHHhhcC-CEEEEEcCCcHHHHhhhh
Q 008544 128 TSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHH-GKRWKAKFR-FVVGIVHTNYLEYVKREK 205 (562)
Q Consensus 128 ~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~-~~~~~~~~~-~vi~~~h~~~~~~~~~~~ 205 (562)
.+..+ |. ..+- +.-++..+.+++..|+|.|+++.. ++| +.+.++.++ +.+++-|..|..-
T Consensus 67 -n~tT~---pt-----v~~~--~Pllr~i~lrE~I~ivhghs~fS~--lahe~l~hartMGlktVfTdHSlfGfa----- 128 (426)
T KOG1111|consen 67 -NQTTF---PT-----VFSD--FPLLRPILLRERIEIVHGHSPFSY--LAHEALMHARTMGLKTVFTDHSLFGFA----- 128 (426)
T ss_pred -cccch---hh-----hhcc--CcccchhhhhhceEEEecCChHHH--HHHHHHHHHHhcCceEEEecccccccc-----
Confidence 00000 11 0000 222666777789999999988765 333 334455555 7888888754321
Q ss_pred chHHHHHHHHHHHHHHHHHhccEEEEcChhhhcc--------CCCccccccccCCCCcCcchhhhHHhhcCCCCCccEEE
Q 008544 206 NDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEY--------PNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAY 277 (562)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~--------~~~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il 277 (562)
.+...+...+... .....|++||+|...++- +.+..+..|.++...|.|.... ....+...|+
T Consensus 129 --d~~si~~n~ll~~-sL~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~------~~S~~i~~iv 199 (426)
T KOG1111|consen 129 --DIGSILTNKLLPL-SLANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAAD------KPSADIITIV 199 (426)
T ss_pred --chhhhhhcceeee-eecCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCccc------cCCCCeeEEE
Confidence 1111222211111 111479999999999882 2233344467788777764332 1122247899
Q ss_pred EEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEE--eCC--CCChHHHHhhcCEEEEcc
Q 008544 278 YIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRV--YPG--RDHADPIFHDYKVFLNPS 353 (562)
Q Consensus 278 ~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~--~~~--~~~~~~l~~~adv~v~pS 353 (562)
.++|+.++||+|.++++++++++++|+++++|+|+||.+..+++..+++.+..++ +|. .+++.+.|.+.|+|++||
T Consensus 200 v~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntS 279 (426)
T KOG1111|consen 200 VASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTS 279 (426)
T ss_pred EEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccH
Confidence 9999999999999999999999999999999999999998888888888777554 444 455559999999999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEee-CCHHHHHHHHHHHHhCCCC-Cc--cHHHHhcCCHHHHHH
Q 008544 354 TTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTY-DGRNGFVEATLKALAEEPA-QP--TDAQTHQLSWESATE 428 (562)
Q Consensus 354 ~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~-~d~~~la~~i~~ll~~~~~-~l--~~~ar~~~sw~~~~~ 428 (562)
..|.||++++|||+||+|||+|+.|| +|++.++ .-+.. .+++++++++++++..-.. .. -+.-.+.|+|+.+++
T Consensus 280 lTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~i~~~~~~~~dl~~~v~~ai~~~~~~p~~~h~~v~~~y~w~dVa~ 358 (426)
T KOG1111|consen 280 LTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED-MITLGEPGPDDLVGAVEKAITKLRTLPLEFHDRVKKMYSWKDVAE 358 (426)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc-ceeccCCChHHHHHHHHHHHHHhccCchhHHHHHHHhccHHHHHH
Confidence 99999999999999999999999999 9999554 12122 4899999999999876554 23 333338999999999
Q ss_pred HHHHHHHhcCccccc
Q 008544 429 RFLQVAELVGDVVTK 443 (562)
Q Consensus 429 ~~~~~y~~~~~~~~~ 443 (562)
+..++|..+......
T Consensus 359 rTekvy~r~~~t~~~ 373 (426)
T KOG1111|consen 359 RTEKVYDRAATTSIR 373 (426)
T ss_pred HHHHHHHHHhhccCc
Confidence 999999998855443
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=303.65 Aligned_cols=366 Identities=15% Similarity=0.119 Sum_probs=239.1
Q ss_pred ccCCeEEEEecccCCC--cccccccHHHHHHHHHHcCCCeEEEEeecCCccccccc--cCCCceeCCchhhHHHHHHHh-
Q 008544 47 RKQQHIAIFTTASLPW--LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQV--YPGNITFASPKEQEAYVRWWL- 121 (562)
Q Consensus 47 ~~~~rI~ivt~~~~P~--~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~--~p~~i~~~~~~~~~~~~~~~~- 121 (562)
.++|||++|+.-+.|. .||.+..+..|+++|++.| |+|.|++|.+........ .+....+.-... .++.|.
T Consensus 585 ~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~G-h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~---~~~v~~~ 660 (1036)
T PLN02316 585 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLN-HNVDIILPKYDCLNLSHVKDLHYQRSYSWGGT---EIKVWFG 660 (1036)
T ss_pred CCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcC-CEEEEEecCCcccchhhcccceEEEEeccCCE---EEEEEEE
Confidence 3559999999888896 6888889999999999998 999999997643111000 000000000000 000000
Q ss_pred ---hhccCCCCCc-cc----ccccccchhccchhhhHHhHHhhcC--cCCCcEEEecCCchhhhhhchHHHHhh-----c
Q 008544 122 ---EDRTGFTSTF-DT----RFYPGKFAADKKSILAVGDITEIIP--DEEADIAVLEEPEHLTWFHHGKRWKAK-----F 186 (562)
Q Consensus 122 ---~~~~~~~~~~-~i----~~y~~r~~~~~~~~~~~~~l~~~i~--~~~pDvV~~~~~~~~~~~~~~~~~~~~-----~ 186 (562)
..++.+.... .+ ..|.. .....+..+-.....+++. ..+|||||+|..... +. +..+... +
T Consensus 661 ~~~GV~vyfl~~~~~~F~r~~~Yg~-~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~ta-lv--a~llk~~~~~~~~ 736 (1036)
T PLN02316 661 KVEGLSVYFLEPQNGMFWAGCVYGC-RNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSA-PV--AWLFKDHYAHYGL 736 (1036)
T ss_pred EECCcEEEEEeccccccCCCCCCCc-hhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHH-HH--HHHHHHhhhhhcc
Confidence 0000000000 00 00100 0000111111111222322 358999999987443 33 1222221 1
Q ss_pred --CCEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhc-c------C---CCccccccccCCCC
Q 008544 187 --RFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQE-Y------P---NSIVCNVHGVNPKF 254 (562)
Q Consensus 187 --~~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~-~------~---~~~~~~v~GVd~~~ 254 (562)
.|+|.++|... +.. ..+...+. +||.|+++|+..++ + . .+...+.||||+..
T Consensus 737 ~~~p~V~TiHnl~--~~~------------n~lk~~l~--~AD~ViTVS~tya~EI~~~~~l~~~~~Kl~vI~NGID~~~ 800 (1036)
T PLN02316 737 SKARVVFTIHNLE--FGA------------NHIGKAMA--YADKATTVSPTYSREVSGNSAIAPHLYKFHGILNGIDPDI 800 (1036)
T ss_pred CCCCEEEEeCCcc--cch------------hHHHHHHH--HCCEEEeCCHHHHHHHHhccCcccccCCEEEEECCccccc
Confidence 37999999542 110 01112222 37999999988765 1 1 12234457999976
Q ss_pred cCcchh--------------------hhHHhhcCCC-CCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCC
Q 008544 255 LEIGEK--------------------KMEQQQNGNK-AFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNG 313 (562)
Q Consensus 255 ~~~~~~--------------------~~~~~~~~~~-~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g 313 (562)
|.|... ...++..+++ .+.++|+||||+.++||++.|++|+..+.+. +++|+|+|+|
T Consensus 801 w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~~qlVIvG~G 878 (1036)
T PLN02316 801 WDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--NGQVVLLGSA 878 (1036)
T ss_pred cCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--CcEEEEEeCC
Confidence 654321 1124456666 3578999999999999999999999988753 7999999999
Q ss_pred CC---HHHHHHHHHhcCC----eeEEeCCCCChH--HHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-cccc
Q 008544 314 ED---FDQIQRAAKKLKL----VVRVYPGRDHAD--PIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFF 383 (562)
Q Consensus 314 ~~---~~~l~~~~~~l~l----~~~~~~~~~~~~--~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v 383 (562)
++ .+.++++++++++ .+.+++++++.. .+|+.+|+||+||.+|+||++.+|||+||+|+|+++.|| .|.|
T Consensus 879 pd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV 958 (1036)
T PLN02316 879 PDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTV 958 (1036)
T ss_pred CCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhc
Confidence 76 3678888887764 355666766653 799999999999999999999999999999999999998 8888
Q ss_pred ccC-------------CceEeeC--CHHHHHHHHHHHHhCCCC---CccHHHH----hcCCHHHHHHHHHHHHHhcC
Q 008544 384 KQF-------------PNCRTYD--GRNGFVEATLKALAEEPA---QPTDAQT----HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 384 ~~~-------------~~g~~~~--d~~~la~~i~~ll~~~~~---~l~~~ar----~~~sw~~~~~~~~~~y~~~~ 438 (562)
.++ .+|++++ |+++++.+|.+++.+... .+++.++ +.|||+.++++|+++|+.+.
T Consensus 959 ~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 959 FDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred cccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 774 6899985 999999999999987422 3444443 78999999999999998764
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=283.61 Aligned_cols=345 Identities=11% Similarity=0.016 Sum_probs=231.6
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||+++++.+ ..||++..+.+++++|.+.| |+|+++++... +. .+. ..+ .+... . ..
T Consensus 1 ki~~~~~~~--~~GGv~~~~~~l~~~l~~~g-~~v~~~~~~~~--~~--~~~------~~~----~~~~~----~---~g 56 (372)
T cd03792 1 KVLHVNSTP--YGGGVAEILHSLVPLMRDLG-VDTRWEVIKGD--PE--FFN------VTK----KFHNA----L---QG 56 (372)
T ss_pred CeEEEeCCC--CCCcHHHHHHHHHHHHHHcC-CCceEEecCCC--hh--HHH------HHH----HhhHh----h---cC
Confidence 689998875 46898888999999999998 99999987221 00 000 000 00000 0 00
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhh-cCCEEEEEcCCcHHHHhhhhchHH
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAK-FRFVVGIVHTNYLEYVKREKNDRL 209 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~-~~~vi~~~h~~~~~~~~~~~~~~~ 209 (562)
.++.. +......... .....+.+.+...+|||||+|++....+. .+.+. ..|+|.+.|+.+..+.
T Consensus 57 ~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~Dvv~~h~~~~~~~~----~~~~~~~~~~i~~~H~~~~~~~-------- 122 (372)
T cd03792 57 ADIEL-SEEEKEIYLE-WNEENAERPLLDLDADVVVIHDPQPLALP----LFKKKRGRPWIWRCHIDLSSPN-------- 122 (372)
T ss_pred CCCCC-CHHHHHHHHH-HHHHHhccccccCCCCEEEECCCCchhHH----HhhhcCCCeEEEEeeeecCCCc--------
Confidence 11111 1110000000 00001111345678999999988744221 12222 2378889997653211
Q ss_pred HHHHHHHHHHHHHHHhccEEEEcChhhhc--cCCCccccccccCCCC-c----CcchhhhHHhhcCCCCCccEEEEEeec
Q 008544 210 QAFLLEFVNSWLARVHCHKVIRLSAATQE--YPNSIVCNVHGVNPKF-L----EIGEKKMEQQQNGNKAFTKGAYYIGRM 282 (562)
Q Consensus 210 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~--~~~~~~~~v~GVd~~~-~----~~~~~~~~~~~~~~~~~~~~il~vGr~ 282 (562)
....+.+...+.+ +|.+++.|..... +..+.....+|||+.. + .+......+...+.+++.++++++||+
T Consensus 123 -~~~~~~~~~~~~~--~d~~i~~~~~~~~~~~~~~~~vipngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl 199 (372)
T cd03792 123 -RRVWDFLQPYIED--YDAAVFHLPEYVPPQVPPRKVIIPPSIDPLSGKNRELSPADIEYILEKYGIDPERPYITQVSRF 199 (372)
T ss_pred -HHHHHHHHHHHHh--CCEEeecHHHhcCCCCCCceEEeCCCCCCCccccCCCCHHHHHHHHHHhCCCCCCcEEEEEecc
Confidence 1122333333444 5888888733322 2223334446898742 1 111222334456777778999999999
Q ss_pred cccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCH-----HHHHHHHHhcCC--eeEEeCCC----CChHHHHhhcCEEEE
Q 008544 283 VWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDF-----DQIQRAAKKLKL--VVRVYPGR----DHADPIFHDYKVFLN 351 (562)
Q Consensus 283 ~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~-----~~l~~~~~~l~l--~~~~~~~~----~~~~~l~~~adv~v~ 351 (562)
.+.||++.+++++..+.+..|+++|+++|+|+.. +.+++..+..+. ++.+++.. .+..++|+.+|+|++
T Consensus 200 ~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~ 279 (372)
T cd03792 200 DPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQ 279 (372)
T ss_pred ccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEe
Confidence 9999999999999999888789999999998642 234444434443 35555543 445589999999999
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeCCHHHHHHHHHHHHhCCCC--CccHHHH----hcCCHH
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYDGRNGFVEATLKALAEEPA--QPTDAQT----HQLSWE 424 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw~ 424 (562)
||..|+||++++||||||+|||+++.++ .+++.++.+|+++++.++++++|.+++++++. .|+++++ ++|+|+
T Consensus 280 ~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~ 359 (372)
T cd03792 280 KSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVDTVEEAAVRILYLLRDPELRRKMGANAREHVRENFLIT 359 (372)
T ss_pred CCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeCCcHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHH
Confidence 9999999999999999999999999987 89999999999999999999999999998765 7777776 689999
Q ss_pred HHHHHHHHHHHh
Q 008544 425 SATERFLQVAEL 436 (562)
Q Consensus 425 ~~~~~~~~~y~~ 436 (562)
.+++++++.|+.
T Consensus 360 ~~~~~~~~~~~~ 371 (372)
T cd03792 360 RHLKDYLYLISK 371 (372)
T ss_pred HHHHHHHHHHHh
Confidence 999999999985
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-32 Score=284.47 Aligned_cols=266 Identities=12% Similarity=0.078 Sum_probs=200.9
Q ss_pred HHhhcCcCCCcEEEecCCchhhhhhchHHHHh--hcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEE
Q 008544 153 ITEIIPDEEADIAVLEEPEHLTWFHHGKRWKA--KFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKV 229 (562)
Q Consensus 153 l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~--~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 229 (562)
+.+.+++.+||+||+|..... +. +..++. ..+ +++.++|......... ...+...+...+.+ +|.+
T Consensus 110 ~~~~~~~~~~diihaH~~~~~-~~--~~~~~~~~~~~~~~~~t~Hg~d~~~~~~------~~~~~~~~~~~~~~--ad~v 178 (406)
T PRK15427 110 CAQVATPFVADVFIAHFGPAG-VT--AAKLRELGVLRGKIATIFHGIDISSREV------LNHYTPEYQQLFRR--GDLM 178 (406)
T ss_pred HhhhhccCCCCEEEEcCChHH-HH--HHHHHHhCCCCCCeEEEEcccccccchh------hhhhhHHHHHHHHh--CCEE
Confidence 345567889999999986543 22 233333 222 6788999642211100 00111122223333 7999
Q ss_pred EEcChhhhccC------CCccc-cccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhc
Q 008544 230 IRLSAATQEYP------NSIVC-NVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKEL 302 (562)
Q Consensus 230 i~~S~~~~~~~------~~~~~-~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~ 302 (562)
+++|+..++.. .+++. ..+|+|.+.|.+.... ...+...++|+||+.+.||++.++++++.+.++.
T Consensus 179 v~~S~~~~~~l~~~g~~~~ki~vi~nGvd~~~f~~~~~~-------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~ 251 (406)
T PRK15427 179 LPISDLWAGRLQKMGCPPEKIAVSRMGVDMTRFSPRPVK-------APATPLEIISVARLTEKKGLHVAIEACRQLKEQG 251 (406)
T ss_pred EECCHHHHHHHHHcCCCHHHEEEcCCCCCHHHcCCCccc-------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhC
Confidence 99998877732 22232 3369998777542211 1123567999999999999999999999998888
Q ss_pred CCcEEEEEeCCCCHHHHHHHHHhcCCeeE--EeCCC--CChHHHHhhcCEEEEccCC------CCCcHHHHHHHHcCCcE
Q 008544 303 AGLEMDLYGNGEDFDQIQRAAKKLKLVVR--VYPGR--DHADPIFHDYKVFLNPSTT------DVVCTATAEALAMGKIV 372 (562)
Q Consensus 303 ~~~~l~ivG~g~~~~~l~~~~~~l~l~~~--~~~~~--~~~~~l~~~adv~v~pS~~------E~~~~~~lEAma~G~PV 372 (562)
++++|+|+|+|+..+++++.+++++++.+ +.|.. +++.++|+.||+||+||.. ||+|++++||||||+||
T Consensus 252 ~~~~l~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PV 331 (406)
T PRK15427 252 VAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPV 331 (406)
T ss_pred CCEEEEEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCE
Confidence 89999999999999999999999987644 44543 3455999999999999974 99999999999999999
Q ss_pred EeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHh-CCCC--CccHHHH----hcCCHHHHHHHHHHHHHh
Q 008544 373 VCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALA-EEPA--QPTDAQT----HQLSWESATERFLQVAEL 436 (562)
Q Consensus 373 I~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~-~~~~--~l~~~ar----~~~sw~~~~~~~~~~y~~ 436 (562)
|+|+.++ .|++.++.+|++++ |+++++++|.++++ |++. +|+++++ ++|+|+..++++.++|+.
T Consensus 332 I~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 332 VSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred EEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9999998 99999999999984 99999999999999 7764 7888887 889999999999999875
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=297.93 Aligned_cols=388 Identities=16% Similarity=0.136 Sum_probs=245.4
Q ss_pred ccCCeEEEEecccCCC--cccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccC-C--CceeCC-chhhHHHHHHH
Q 008544 47 RKQQHIAIFTTASLPW--LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYP-G--NITFAS-PKEQEAYVRWW 120 (562)
Q Consensus 47 ~~~~rI~ivt~~~~P~--~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p-~--~i~~~~-~~~~~~~~~~~ 120 (562)
.+++||++|+.-..|+ .||-+-.+-.|.++|++.| |+|.|++|.|.......+.. . ...+.. ........+.|
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~G-hdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~ 557 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKG-HLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIW 557 (977)
T ss_pred CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcC-CeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEE
Confidence 3559999999988897 5888888899999999998 99999999875332110000 0 000000 00000000000
Q ss_pred hh----hccCCCC-C-----c-ccccccccchhccchhhhHHhHHhhcC--cCCCcEEEecCCchhhhhhchHH-HHh-h
Q 008544 121 LE----DRTGFTS-T-----F-DTRFYPGKFAADKKSILAVGDITEIIP--DEEADIAVLEEPEHLTWFHHGKR-WKA-K 185 (562)
Q Consensus 121 ~~----~~~~~~~-~-----~-~i~~y~~r~~~~~~~~~~~~~l~~~i~--~~~pDvV~~~~~~~~~~~~~~~~-~~~-~ 185 (562)
.. ..+.+.. . | +-..|.. .....+..+-.....+++. ..+|||||+|.+......+.... +.. .
T Consensus 558 ~~~~~GV~vyfId~~~~~~fF~R~~iYg~-~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~ 636 (977)
T PLN02939 558 TGTVEGLPVYFIEPQHPSKFFWRAQYYGE-HDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKG 636 (977)
T ss_pred EEEECCeeEEEEecCCchhccCCCCCCCC-ccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhcc
Confidence 00 0001100 0 0 0001100 0011111111222333443 36899999999876522111000 100 1
Q ss_pred cC--CEEEEEcCCc-HHH-----Hhhhhch--------HHHHHHHHHHHHHHHHH-hccEEEEcChhhhcc---------
Q 008544 186 FR--FVVGIVHTNY-LEY-----VKREKND--------RLQAFLLEFVNSWLARV-HCHKVIRLSAATQEY--------- 239 (562)
Q Consensus 186 ~~--~vi~~~h~~~-~~~-----~~~~~~~--------~~~~~~~~~~~~~~~~~-~ad~vi~~S~~~~~~--------- 239 (562)
+. ++|.++|..- ... ....+.. .+...+...++..-..+ +||.|+++|+..++-
T Consensus 637 ~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~GL 716 (977)
T PLN02939 637 FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGL 716 (977)
T ss_pred CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHhccch
Confidence 22 7999999651 110 0000000 00000011111111111 589999999776652
Q ss_pred ------CC-CccccccccCCCCcCcchh-------------------hhHHhhcCCCC---CccEEEEEeeccccCCHHH
Q 008544 240 ------PN-SIVCNVHGVNPKFLEIGEK-------------------KMEQQQNGNKA---FTKGAYYIGRMVWSKGYEE 290 (562)
Q Consensus 240 ------~~-~~~~~v~GVd~~~~~~~~~-------------------~~~~~~~~~~~---~~~~il~vGr~~~~Kg~~~ 290 (562)
.. +...+.||||++.|.|... ...+...+++. +.++|+||||+.++||++.
T Consensus 717 ~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDl 796 (977)
T PLN02939 717 QDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHL 796 (977)
T ss_pred HHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHH
Confidence 11 2234558999987776532 22345567653 4689999999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEeCCCCH---HHHHHHHHhcCCe--eEEeCCCCChH--HHHhhcCEEEEccCCCCCcHHHH
Q 008544 291 LLGLLNIYHKELAGLEMDLYGNGEDF---DQIQRAAKKLKLV--VRVYPGRDHAD--PIFHDYKVFLNPSTTDVVCTATA 363 (562)
Q Consensus 291 ll~a~~~l~~~~~~~~l~ivG~g~~~---~~l~~~~~~l~l~--~~~~~~~~~~~--~l~~~adv~v~pS~~E~~~~~~l 363 (562)
+++|+..+.. ++++|+|+|+|++. +.+++++++++.. +.+.+++++.. .+|+.+|+||+||.+|+||++++
T Consensus 797 LleA~~~Ll~--~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqL 874 (977)
T PLN02939 797 IRHAIYKTAE--LGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQM 874 (977)
T ss_pred HHHHHHHHhh--cCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHH
Confidence 9999988764 47999999999763 6778888888764 56667777654 79999999999999999999999
Q ss_pred HHHHcCCcEEeeCCCC-cccccc---------CCceEeeC--CHHHHHHHHHHHHh----CCCC--CccHHHH-hcCCHH
Q 008544 364 EALAMGKIVVCANHPS-NDFFKQ---------FPNCRTYD--GRNGFVEATLKALA----EEPA--QPTDAQT-HQLSWE 424 (562)
Q Consensus 364 EAma~G~PVI~t~~~~-~e~v~~---------~~~g~~~~--d~~~la~~i~~ll~----~~~~--~l~~~ar-~~~sw~ 424 (562)
|||+||+|+|+++.|| .|.|.+ +.+|++++ |+++|+++|.+++. ++.. .|++++. +.|||+
T Consensus 875 EAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~~dFSWe 954 (977)
T PLN02939 875 IAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWD 954 (977)
T ss_pred HHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhcCCHH
Confidence 9999999999999998 887765 57899974 99999999999876 4443 6776665 789999
Q ss_pred HHHHHHHHHHHhcC
Q 008544 425 SATERFLQVAELVG 438 (562)
Q Consensus 425 ~~~~~~~~~y~~~~ 438 (562)
.++++|.++|+...
T Consensus 955 ~~A~qYeeLY~~ll 968 (977)
T PLN02939 955 SSASQYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999776
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=285.86 Aligned_cols=349 Identities=15% Similarity=0.117 Sum_probs=234.5
Q ss_pred CeEEEEecccCCCc-ccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCC
Q 008544 50 QHIAIFTTASLPWL-TGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFT 128 (562)
Q Consensus 50 ~rI~ivt~~~~P~~-~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (562)
|||+++++.|+|.. ||++.++..+++.|.++ |+|+|++..... . ..++++..... .| ..
T Consensus 1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~--~~v~v~~~~~~~---~--~~~~~~~~~~~-------~~--~~---- 60 (388)
T TIGR02149 1 MKVTVLTREYPPNVYGGAGVHVEELTRELARL--MDVDVRCFGDQR---F--DSEGLTVKGYR-------PW--SE---- 60 (388)
T ss_pred CeeEEEecccCccccccHhHHHHHHHHHHHHh--cCeeEEcCCCch---h--cCCCeEEEEec-------Ch--hh----
Confidence 68999999999885 88889999999999885 577777652110 0 00111110000 00 00
Q ss_pred CCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhh-cC-CEEEEEcCCcHHHHhhh-h
Q 008544 129 STFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAK-FR-FVVGIVHTNYLEYVKRE-K 205 (562)
Q Consensus 129 ~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~-~~-~vi~~~h~~~~~~~~~~-~ 205 (562)
+. ........ ...++.......++|+||+|..... +. ..+..+ .+ |++.++|+.++...... .
T Consensus 61 ----~~----~~~~~~~~--~~~~~~~~~~~~~~divh~~~~~~~-~~---~~~~~~~~~~p~v~~~h~~~~~~~~~~~~ 126 (388)
T TIGR02149 61 ----LK----EANKALGT--FSVDLAMANDPVDADVVHSHTWYTF-LA---GHLAKKLYDKPLVVTAHSLEPLRPWKEEQ 126 (388)
T ss_pred ----cc----chhhhhhh--hhHHHHHhhCCCCCCeEeecchhhh-hH---HHHHHHhcCCCEEEEeecccccccccccc
Confidence 00 00000000 0112222233457999999986543 22 223333 23 89999997643211000 0
Q ss_pred chHHHHHHHHHHHHHHHHHhccEEEEcChhhhccC--------CCcc-ccccccCCCCcCcchhhhHHhhcCCCCCccEE
Q 008544 206 NDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYP--------NSIV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGA 276 (562)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~--------~~~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~i 276 (562)
.... ..+...+.+...+. +|.++++|+..++.. ...+ ...+|+|+..+.+......+...+.+.+.+++
T Consensus 127 ~~~~-~~~~~~~~~~~~~~-ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~i 204 (388)
T TIGR02149 127 LGGG-YKLSSWAEKTAIEA-ADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGNVVLDRYGIDRSRPYI 204 (388)
T ss_pred cccc-hhHHHHHHHHHHhh-CCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCCchHHHHHHhCCCCCceEE
Confidence 0000 01222233333333 899999998876621 1223 33469998877665444445566677777899
Q ss_pred EEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCH----HHHHHHHHhcCC---eeEEeCC---CCChHHHHhhc
Q 008544 277 YYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDF----DQIQRAAKKLKL---VVRVYPG---RDHADPIFHDY 346 (562)
Q Consensus 277 l~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~----~~l~~~~~~l~l---~~~~~~~---~~~~~~l~~~a 346 (562)
+|+||+.+.||++.++++++++. ++++++++|+|++. +.+++.+..++. ++.++++ .++..++|+.+
T Consensus 205 ~~~Grl~~~Kg~~~li~a~~~l~---~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~a 281 (388)
T TIGR02149 205 LFVGRITRQKGVPHLLDAVHYIP---KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNA 281 (388)
T ss_pred EEEcccccccCHHHHHHHHHHHh---hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhC
Confidence 99999999999999999998874 36889999887653 455666666554 2455555 34566999999
Q ss_pred CEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CH------HHHHHHHHHHHhCCCC--CccH
Q 008544 347 KVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GR------NGFVEATLKALAEEPA--QPTD 415 (562)
Q Consensus 347 dv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~------~~la~~i~~ll~~~~~--~l~~ 415 (562)
|++|+||..|++|++++|||+||+|||+++.++ .|++.++.+|++++ |+ ++++++|.+++++++. +|++
T Consensus 282 Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~ 361 (388)
T TIGR02149 282 EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGI 361 (388)
T ss_pred CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHHHHHHHH
Confidence 999999999999999999999999999999998 99999999999974 66 8999999999998875 7777
Q ss_pred HHH----hcCCHHHHHHHHHHHHHhc
Q 008544 416 AQT----HQLSWESATERFLQVAELV 437 (562)
Q Consensus 416 ~ar----~~~sw~~~~~~~~~~y~~~ 437 (562)
+++ ++|+|+.+++++.++|+..
T Consensus 362 ~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 362 AGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 776 6899999999999999864
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=290.20 Aligned_cols=353 Identities=15% Similarity=0.125 Sum_probs=220.3
Q ss_pred CCCcccccccHHHHHHHHHHcCCC--eEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCCccccccc
Q 008544 60 LPWLTGTAVNPLFRAAYLAKDGER--RVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYP 137 (562)
Q Consensus 60 ~P~~~G~a~~~~~la~~L~~~Gg~--eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~y~ 137 (562)
.|..||++.++.++++.|+++| | +|+|+|.......-..-|.... . +. ..-.+-.++...+
T Consensus 22 ~p~~GG~~~~v~~La~~L~~~G-~~~~V~v~t~~~~~~~~~~~~~~~~--~--~~------------~~gv~v~r~~~~~ 84 (439)
T TIGR02472 22 DADTGGQTKYVLELARALARRS-EVEQVDLVTRLIKDAKVSPDYAQPI--E--RI------------APGARIVRLPFGP 84 (439)
T ss_pred CCCCCCcchHHHHHHHHHHhCC-CCcEEEEEeccccCcCCCCccCCCe--e--Ee------------CCCcEEEEecCCC
Confidence 4888999999999999999998 6 9999996321100000011000 0 00 0000001111111
Q ss_pred ccchhccchh-----hhHHhHHhhcCc--CCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhh-h---
Q 008544 138 GKFAADKKSI-----LAVGDITEIIPD--EEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKRE-K--- 205 (562)
Q Consensus 138 ~r~~~~~~~~-----~~~~~l~~~i~~--~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~-~--- 205 (562)
.++.. .... .....+.+.+++ .+|||||+|.... ++. +..+++..+ |+|.+.|+......... .
T Consensus 85 ~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~DvIH~h~~~~-~~~--~~~~~~~~~~p~V~t~H~~~~~~~~~~~~~~~ 160 (439)
T TIGR02472 85 RRYLR-KELLWPYLDELADNLLQHLRQQGHLPDLIHAHYADA-GYV--GARLSRLLGVPLIFTGHSLGREKRRRLLAAGL 160 (439)
T ss_pred CCCcC-hhhhhhhHHHHHHHHHHHHHHcCCCCCEEEEcchhH-HHH--HHHHHHHhCCCEEEecccccchhhhhcccCCC
Confidence 11100 0000 011235555554 3799999997543 333 333444444 89999996432111100 0
Q ss_pred -chHHHHH--HHHH--HHHHHHHHhccEEEEcChhh-hc-------cCCCcc-ccccccCCCCcCcchhhh-------HH
Q 008544 206 -NDRLQAF--LLEF--VNSWLARVHCHKVIRLSAAT-QE-------YPNSIV-CNVHGVNPKFLEIGEKKM-------EQ 264 (562)
Q Consensus 206 -~~~~~~~--~~~~--~~~~~~~~~ad~vi~~S~~~-~~-------~~~~~~-~~v~GVd~~~~~~~~~~~-------~~ 264 (562)
...+... +... ..++..+ .+|.||++|... ++ ++.+++ +..||||++.|.+..... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~-~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~ 239 (439)
T TIGR02472 161 KPQQIEKQYNISRRIEAEEETLA-HASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLL 239 (439)
T ss_pred ChhhhhhhcchHHHHHHHHHHHH-hCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHH
Confidence 0000000 0001 1222333 389999998543 22 233334 344799998776532211 11
Q ss_pred hhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEE-EEeCCCCHH-----------HHHHHHHhcCCeeE-
Q 008544 265 QQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMD-LYGNGEDFD-----------QIQRAAKKLKLVVR- 331 (562)
Q Consensus 265 ~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~-ivG~g~~~~-----------~l~~~~~~l~l~~~- 331 (562)
+..+..++.++++|+||+.+.||++.+++|+..+....++.+++ ++|+|++.+ ++.++++++++..+
T Consensus 240 ~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V 319 (439)
T TIGR02472 240 APFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKV 319 (439)
T ss_pred HhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceE
Confidence 22334455789999999999999999999998643211123333 568776532 23445666666544
Q ss_pred -EeCC--CCChHHHHhhc----CEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHH
Q 008544 332 -VYPG--RDHADPIFHDY----KVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEA 401 (562)
Q Consensus 332 -~~~~--~~~~~~l~~~a----dv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~ 401 (562)
|.+. .+++.++|+.+ |+||+||..|+||++++||||||+|||+|+.++ .|++.++.+|++++ |+++++++
T Consensus 320 ~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~ 399 (439)
T TIGR02472 320 AYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASA 399 (439)
T ss_pred EecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHH
Confidence 4443 45666889877 999999999999999999999999999999998 99999999999974 99999999
Q ss_pred HHHHHhCCCC--CccHHHH----hcCCHHHHHHHHHHHH
Q 008544 402 TLKALAEEPA--QPTDAQT----HQLSWESATERFLQVA 434 (562)
Q Consensus 402 i~~ll~~~~~--~l~~~ar----~~~sw~~~~~~~~~~y 434 (562)
|.++++|+.. .|+++++ ++|||+.+++++.++.
T Consensus 400 i~~ll~~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 400 LEDALSDSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999998875 7888776 7899999999998875
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=293.46 Aligned_cols=381 Identities=13% Similarity=0.089 Sum_probs=238.7
Q ss_pred cCCeEEEEecccCCC--cccccccHHHHHHHHHHcCCCeEEEEeecCCccccccc-cCCCceeCCc-h-------hhHHH
Q 008544 48 KQQHIAIFTTASLPW--LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQV-YPGNITFASP-K-------EQEAY 116 (562)
Q Consensus 48 ~~~rI~ivt~~~~P~--~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~-~p~~i~~~~~-~-------~~~~~ 116 (562)
++|||++|+.-..|+ .||-+-..-.|.++|+++| |+|.|+.|.+...+.... ......+..+ . .....
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g-~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHG-VEVRTLVPGYPAVLAGIEDAEQVHSFPDLFGGPARLLAARAGG 80 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCC-CcEEEEeCCCcchhhhhcCceEEEEEeeeCCceEEEEEEEeCC
Confidence 458999999888887 5787777888999999998 999999997754321100 0000000000 0 00000
Q ss_pred HHHHhh-hccCCCCCcccc------cccccchhccchhhhHH---hHHhh-cCcCCCcEEEecCCchhhhhhchHHHHh-
Q 008544 117 VRWWLE-DRTGFTSTFDTR------FYPGKFAADKKSILAVG---DITEI-IPDEEADIAVLEEPEHLTWFHHGKRWKA- 184 (562)
Q Consensus 117 ~~~~~~-~~~~~~~~~~i~------~y~~r~~~~~~~~~~~~---~l~~~-i~~~~pDvV~~~~~~~~~~~~~~~~~~~- 184 (562)
+..++- ....+.....+. -|+. ...+..+-.. .+.+. ..+.+|||||+|..... +++ ..+..
T Consensus 81 v~~~~~~~~~~f~r~~~~y~~~~~~~~~d---~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~-l~~--~~l~~~ 154 (485)
T PRK14099 81 LDLFVLDAPHLYDRPGNPYVGPDGKDWPD---NAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAG-LAP--AYLHYS 154 (485)
T ss_pred ceEEEEeChHhhCCCCCCCCCccCCCCCc---HHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHH-HHH--HHHHhC
Confidence 000000 000000000000 0111 1111111111 12222 24579999999995543 332 22221
Q ss_pred -hcC-CEEEEEcCCcHH-HH-h----hhhch--HHH--H-HHHHH--HHHHHHHHhccEEEEcChhhhccC---------
Q 008544 185 -KFR-FVVGIVHTNYLE-YV-K----REKND--RLQ--A-FLLEF--VNSWLARVHCHKVIRLSAATQEYP--------- 240 (562)
Q Consensus 185 -~~~-~vi~~~h~~~~~-~~-~----~~~~~--~~~--~-~~~~~--~~~~~~~~~ad~vi~~S~~~~~~~--------- 240 (562)
+.+ |.|.|+|+.... .. . ..+.. .+. . .+... +.+...+ +||.|+++|+..++..
T Consensus 155 ~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~-~ad~vitVS~~~a~ei~~~~~g~gl 233 (485)
T PRK14099 155 GRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ-LADRITTVSPTYALEIQGPEAGMGL 233 (485)
T ss_pred CCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHH-hcCeeeecChhHHHHHhcccCCcCh
Confidence 222 799999965211 00 0 00000 000 0 00000 1122222 3899999998876621
Q ss_pred -------CCcc-ccccccCCCCcCcchh-------------------hhHHhhcCCC--CCccEEEEEeeccccCCHHHH
Q 008544 241 -------NSIV-CNVHGVNPKFLEIGEK-------------------KMEQQQNGNK--AFTKGAYYIGRMVWSKGYEEL 291 (562)
Q Consensus 241 -------~~~~-~~v~GVd~~~~~~~~~-------------------~~~~~~~~~~--~~~~~il~vGr~~~~Kg~~~l 291 (562)
...+ ...||||++.|.|... ...++..+++ ++.++++++||+.++||++.+
T Consensus 234 ~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~L 313 (485)
T PRK14099 234 DGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLL 313 (485)
T ss_pred HHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHH
Confidence 1122 3447999987766432 1223445665 346788999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEEEeCCCC--HHHHHHHHHhcCCeeEEe-CCCCChHHHH-hhcCEEEEccCCCCCcHHHHHHHH
Q 008544 292 LGLLNIYHKELAGLEMDLYGNGED--FDQIQRAAKKLKLVVRVY-PGRDHADPIF-HDYKVFLNPSTTDVVCTATAEALA 367 (562)
Q Consensus 292 l~a~~~l~~~~~~~~l~ivG~g~~--~~~l~~~~~~l~l~~~~~-~~~~~~~~l~-~~adv~v~pS~~E~~~~~~lEAma 367 (562)
++|+..+.+. +++|+|+|+|+. .+.+++++++++.++.++ +..+++..+| +.+|+||+||.+|+||++++|||+
T Consensus 314 i~A~~~l~~~--~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma 391 (485)
T PRK14099 314 LEALPTLLGE--GAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADALLVPSRFEPCGLTQLCALR 391 (485)
T ss_pred HHHHHHHHhc--CcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcCCEEEECCccCCCcHHHHHHHH
Confidence 9999988754 799999999874 577888888776555444 4445555666 579999999999999999999999
Q ss_pred cCCcEEeeCCCC-ccccccC---------CceEeeC--CHHHHHHHHHH---HHhCCCC--CccHHHH-hcCCHHHHHHH
Q 008544 368 MGKIVVCANHPS-NDFFKQF---------PNCRTYD--GRNGFVEATLK---ALAEEPA--QPTDAQT-HQLSWESATER 429 (562)
Q Consensus 368 ~G~PVI~t~~~~-~e~v~~~---------~~g~~~~--d~~~la~~i~~---ll~~~~~--~l~~~ar-~~~sw~~~~~~ 429 (562)
||+|+|+++.|| .|.+.++ .+|++++ |+++++++|.+ +++|++. +|+++++ ++|||++++++
T Consensus 392 ~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~~~~fSw~~~a~~ 471 (485)
T PRK14099 392 YGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGMTTDVSWRNPAQH 471 (485)
T ss_pred CCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhhcCChHHHHHH
Confidence 999888899988 8888765 6899974 99999999997 5666554 7777776 88999999999
Q ss_pred HHHHHHhcC
Q 008544 430 FLQVAELVG 438 (562)
Q Consensus 430 ~~~~y~~~~ 438 (562)
++++|+...
T Consensus 472 y~~lY~~l~ 480 (485)
T PRK14099 472 YAALYRSLV 480 (485)
T ss_pred HHHHHHHHH
Confidence 999999875
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=301.48 Aligned_cols=385 Identities=17% Similarity=0.140 Sum_probs=244.1
Q ss_pred hccCCeEEEEecccCC-----------CcccccccHHHHHHHHHHcCC-CeEEEEeecCCccccccccCCCceeCCchhh
Q 008544 46 DRKQQHIAIFTTASLP-----------WLTGTAVNPLFRAAYLAKDGE-RRVTLVIPWLSLIHQKQVYPGNITFASPKEQ 113 (562)
Q Consensus 46 ~~~~~rI~ivt~~~~P-----------~~~G~a~~~~~la~~L~~~Gg-~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~ 113 (562)
+.+++.|++|+-...| ..||..+++.++|++|+++|| |+|+|+|......+....|+.......+...
T Consensus 166 ~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~ 245 (1050)
T TIGR02468 166 KEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSS 245 (1050)
T ss_pred ccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccccccccc
Confidence 3456899999965553 345677889999999999865 4999999855321111112211111111000
Q ss_pred HHHHHHHhhhccCCCCC---ccccccccc-chhccchhhh-----HHhHHhhcC--------------cCCCcEEEecCC
Q 008544 114 EAYVRWWLEDRTGFTST---FDTRFYPGK-FAADKKSILA-----VGDITEIIP--------------DEEADIAVLEEP 170 (562)
Q Consensus 114 ~~~~~~~~~~~~~~~~~---~~i~~y~~r-~~~~~~~~~~-----~~~l~~~i~--------------~~~pDvV~~~~~ 170 (562)
++.. ......++ .++++-|.. +.. .....+ ...+.+.+. ...|||||.|..
T Consensus 246 ~~~~-----~~~~~~~g~rIvRip~GP~~~~l~-Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw 319 (1050)
T TIGR02468 246 ENDG-----DEMGESSGAYIIRIPFGPRDKYIP-KEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYA 319 (1050)
T ss_pred cccc-----ccccCCCCeEEEEeccCCCCCCcC-HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcc
Confidence 0000 00000011 222332221 110 111111 111222221 124999999976
Q ss_pred chhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhh-hhchH-----HH--HHHHHH--HHHHHHHHhccEEEEcChhhhc-
Q 008544 171 EHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKR-EKNDR-----LQ--AFLLEF--VNSWLARVHCHKVIRLSAATQE- 238 (562)
Q Consensus 171 ~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~-~~~~~-----~~--~~~~~~--~~~~~~~~~ad~vi~~S~~~~~- 238 (562)
... +. +..+...++ |.|.+.|+.-...... ...+. +. ..+... ...+... .||.||+.|...++
T Consensus 320 ~sG-~a--a~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~-~Ad~VIasT~qE~~e 395 (1050)
T TIGR02468 320 DAG-DS--AALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLD-ASEIVITSTRQEIEE 395 (1050)
T ss_pred hHH-HH--HHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHH-hcCEEEEeCHHHHHH
Confidence 544 23 455666666 9999999753222110 00010 00 001111 1223333 38999999966665
Q ss_pred ----c---C----------------------CCccccccccCCCCcCcchhhhH--------------------HhhcCC
Q 008544 239 ----Y---P----------------------NSIVCNVHGVNPKFLEIGEKKME--------------------QQQNGN 269 (562)
Q Consensus 239 ----~---~----------------------~~~~~~v~GVd~~~~~~~~~~~~--------------------~~~~~~ 269 (562)
| . .+..++.+|||++.|.|...... ......
T Consensus 396 q~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 475 (1050)
T TIGR02468 396 QWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFT 475 (1050)
T ss_pred HHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHhhcc
Confidence 1 1 02233446999987766321110 011223
Q ss_pred CCCccEEEEEeeccccCCHHHHHHHHHHHHHh--cCCcEEEEEeCCCCH-----------HHHHHHHHhcCCeeEE-eCC
Q 008544 270 KAFTKGAYYIGRMVWSKGYEELLGLLNIYHKE--LAGLEMDLYGNGEDF-----------DQIQRAAKKLKLVVRV-YPG 335 (562)
Q Consensus 270 ~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~--~~~~~l~ivG~g~~~-----------~~l~~~~~~l~l~~~~-~~~ 335 (562)
.++.++|+|+||+.++||++.||+|+..+.+. .+++. +|+|.|++. ..++++++++++..++ |.+
T Consensus 476 ~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG 554 (1050)
T TIGR02468 476 NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPK 554 (1050)
T ss_pred cCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecC
Confidence 45678999999999999999999999998753 34565 466876542 4567788888876444 433
Q ss_pred ---CCChHHHHhhc----CEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHH
Q 008544 336 ---RDHADPIFHDY----KVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKA 405 (562)
Q Consensus 336 ---~~~~~~l~~~a----dv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~l 405 (562)
.+++.++|+.| |+||+||.+|+||++++||||||+|||+|+.|+ .|++.++.+|++++ |+++|+++|.++
T Consensus 555 ~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~L 634 (1050)
T TIGR02468 555 HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKL 634 (1050)
T ss_pred CCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHH
Confidence 45667899887 699999999999999999999999999999998 99999999999985 999999999999
Q ss_pred HhCCCC--CccHHHH---hcCCHHHHHHHHHHHHHhcCccc
Q 008544 406 LAEEPA--QPTDAQT---HQLSWESATERFLQVAELVGDVV 441 (562)
Q Consensus 406 l~~~~~--~l~~~ar---~~~sw~~~~~~~~~~y~~~~~~~ 441 (562)
++|+.. +|+++++ ++|+|+.+++++++.|+......
T Consensus 635 L~Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~ 675 (1050)
T TIGR02468 635 VADKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRH 675 (1050)
T ss_pred hhCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccC
Confidence 999875 7888776 77999999999999998776443
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-31 Score=275.25 Aligned_cols=353 Identities=22% Similarity=0.250 Sum_probs=244.6
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||+++++.|+|..+|.+.....++++|.++| |+|+++++............ . . . . .....
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g-~~v~v~~~~~~~~~~~~~~~-~----~-~-------~---~~~~~--- 60 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRG-HEVYVVAPSYPGAPEEEEVV-V----V-R-------P---FRVPT--- 60 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHcC-CeEEEEeCCCCCCCcccccc-c----c-c-------c---ccccc---
Confidence 6999999999999999999999999999998 99999988432111100000 0 0 0 0 00000
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHH
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRL 209 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~ 209 (562)
..+. +. .........+...+++.+||+||++.+...... +..++++.+ |++.++|+.+..+.........
T Consensus 61 ---~~~~-~~---~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 131 (374)
T cd03817 61 ---FKYP-DF---RLPLPIPRALIIILKELGPDIVHTHTPFSLGLL--GLRVARKLGIPVVATYHTMYEDYTHYVPLGRL 131 (374)
T ss_pred ---chhh-hh---hccccHHHHHHHHHhhcCCCEEEECCchhhhhH--HHHHHHHcCCCEEEEecCCHHHHHHHHhcccc
Confidence 0000 00 000001223455677889999999988665433 344555555 8999999887655443322111
Q ss_pred -HHHHHH-HHHHHHHHHhccEEEEcChhhhccCC------CccccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEee
Q 008544 210 -QAFLLE-FVNSWLARVHCHKVIRLSAATQEYPN------SIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGR 281 (562)
Q Consensus 210 -~~~~~~-~~~~~~~~~~ad~vi~~S~~~~~~~~------~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr 281 (562)
...... .+.+.... .+|.+++.|+..++... +.....+|+|...+.+..........+...+.+.++|+|+
T Consensus 132 ~~~~~~~~~~~~~~~~-~~d~i~~~s~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~ 210 (374)
T cd03817 132 LARAVVRRKLSRRFYN-RCDAVIAPSEKIADLLREYGVKRPIEVIPTGIDLDRFEPVDGDDERRKLGIPEDEPVLLYVGR 210 (374)
T ss_pred hhHHHHHHHHHHHHhh-hCCEEEeccHHHHHHHHhcCCCCceEEcCCccchhccCccchhHHHHhcCCCCCCeEEEEEee
Confidence 111111 22233333 37999999988776322 1123335888877665443333334455556788999999
Q ss_pred ccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCC--CChHHHHhhcCEEEEccCCCC
Q 008544 282 MVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGR--DHADPIFHDYKVFLNPSTTDV 357 (562)
Q Consensus 282 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~--~~~~~l~~~adv~v~pS~~E~ 357 (562)
+.+.||++.+++++..+.++.++++++++|.|+..+.+++.++++++. +.+++.. ++..++|+.||++++||..|+
T Consensus 211 ~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~ 290 (374)
T cd03817 211 LAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTET 290 (374)
T ss_pred eecccCHHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEecccccC
Confidence 999999999999999998888899999999999888899888877765 4445543 455699999999999999999
Q ss_pred CcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC-CHHHHHHHHHHHHhCCCC--CccHHHH---hcCCHHHHHHHH
Q 008544 358 VCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD-GRNGFVEATLKALAEEPA--QPTDAQT---HQLSWESATERF 430 (562)
Q Consensus 358 ~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~-d~~~la~~i~~ll~~~~~--~l~~~ar---~~~sw~~~~~~~ 430 (562)
+|++++|||+||+|||+++.++ .+++.++.+|++++ +.++++++|.++++++.. .|+++++ ++++ ..+++
T Consensus 291 ~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 367 (374)
T cd03817 291 QGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDEALAEALLRLLQDPELRRRLSKNAEESAEKFS---FAKKV 367 (374)
T ss_pred cChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH---HHHHH
Confidence 9999999999999999999998 99999999999985 222999999999999886 7777776 3333 55566
Q ss_pred HHHHHh
Q 008544 431 LQVAEL 436 (562)
Q Consensus 431 ~~~y~~ 436 (562)
.++|+.
T Consensus 368 ~~~~~~ 373 (374)
T cd03817 368 EKLYEE 373 (374)
T ss_pred HHHHhc
Confidence 666653
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-31 Score=279.48 Aligned_cols=348 Identities=16% Similarity=0.146 Sum_probs=230.8
Q ss_pred CeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccC---CC-ceeCCchhhHHHHHHHhhhcc
Q 008544 50 QHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYP---GN-ITFASPKEQEAYVRWWLEDRT 125 (562)
Q Consensus 50 ~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p---~~-i~~~~~~~~~~~~~~~~~~~~ 125 (562)
|||++++..+. .||.+..+..+++.|.++| |+|+++|+.... ...+. ++ +.+. .
T Consensus 1 mkIl~~~~~~~--~gG~e~~~~~la~~L~~~G-~~V~v~~~~~~~---~~~~~~~~~~~~~i~----------------~ 58 (392)
T cd03805 1 LRVAFIHPDLG--IGGAERLVVDAALALQSRG-HEVTIYTSHHDP---SHCFEETKDGTLPVR----------------V 58 (392)
T ss_pred CeEEEECCCCC--CchHHHHHHHHHHHHHhCC-CeEEEEcCCCCc---hhcchhccCCeeEEE----------------E
Confidence 68999987653 5888889999999999998 999999873210 00010 00 0000 0
Q ss_pred CCCCCcccccccccc---hhccchhhhHHhHH-hhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHH
Q 008544 126 GFTSTFDTRFYPGKF---AADKKSILAVGDIT-EIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYV 201 (562)
Q Consensus 126 ~~~~~~~i~~y~~r~---~~~~~~~~~~~~l~-~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~ 201 (562)
. .......+..++ ....+. ....+. ..+...++|+||++......++ .....+ .+++++.|.......
T Consensus 59 ~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~---~~~~~~-~~~i~~~h~~~~~~~ 130 (392)
T cd03805 59 R--GDWLPRSIFGRFHILCAYLRM--LYLALYLLLLPDEKYDVFIVDQVSACVPL---LKLFSP-SKILFYCHFPDQLLA 130 (392)
T ss_pred E--eEEEcchhhHhHHHHHHHHHH--HHHHHHHHhcccCCCCEEEEcCcchHHHH---HHHhcC-CcEEEEEecChHHhc
Confidence 0 000000000000 000000 000011 1356678999999875443111 112222 578888884322111
Q ss_pred hhhhchHHH---HHHHHHHHHHHHHHhccEEEEcChhhhccCC--------Ccc-ccccccCCCCcCcchhhhHHhhcCC
Q 008544 202 KREKNDRLQ---AFLLEFVNSWLARVHCHKVIRLSAATQEYPN--------SIV-CNVHGVNPKFLEIGEKKMEQQQNGN 269 (562)
Q Consensus 202 ~~~~~~~~~---~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~--------~~~-~~v~GVd~~~~~~~~~~~~~~~~~~ 269 (562)
. ..+... ......+.++..+. +|.++++|+..++... +.. +..+|+|.+.+.+............
T Consensus 131 ~--~~~~~~~~~~~~~~~~e~~~~~~-ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~~~~~~~~ 207 (392)
T cd03805 131 Q--RGSLLKRLYRKPFDWLEEFTTGM-ADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDPDPGLLIP 207 (392)
T ss_pred C--CCcHHHHHHHHHHHHHHHHHhhC-ceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCccccccccccccc
Confidence 1 111111 11222333333443 8999999988877321 112 3346888876654332212222334
Q ss_pred CCCccEEEEEeeccccCCHHHHHHHHHHHHHhc---CCcEEEEEeCCCCH--------HHHHHHHHh-cCCe--eEEeCC
Q 008544 270 KAFTKGAYYIGRMVWSKGYEELLGLLNIYHKEL---AGLEMDLYGNGEDF--------DQIQRAAKK-LKLV--VRVYPG 335 (562)
Q Consensus 270 ~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~---~~~~l~ivG~g~~~--------~~l~~~~~~-l~l~--~~~~~~ 335 (562)
.++.++++++|++.+.||++.+++++.++.++. |+++|+++|+|+.. +++++.+++ ++++ +.+.+.
T Consensus 208 ~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~ 287 (392)
T cd03805 208 KSGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPS 287 (392)
T ss_pred CCCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCC
Confidence 456788999999999999999999999998887 89999999998652 678888888 7765 455566
Q ss_pred CCCh--HHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC-CHHHHHHHHHHHHhCCCC
Q 008544 336 RDHA--DPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD-GRNGFVEATLKALAEEPA 411 (562)
Q Consensus 336 ~~~~--~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~-d~~~la~~i~~ll~~~~~ 411 (562)
..+. .++|+.+|++++||..|+||++++||||||+|||+++.++ .|++.++.+|++++ |+++++++|.++++++..
T Consensus 288 ~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~~~~~~a~~i~~l~~~~~~ 367 (392)
T cd03805 288 ISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEPTPEEFAEAMLKLANDPDL 367 (392)
T ss_pred CChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCCCHHHHHHHHHHHHhChHH
Confidence 5444 3899999999999999999999999999999999999998 89999999999875 999999999999999865
Q ss_pred --CccHHHH----hcCCHHHHHHHH
Q 008544 412 --QPTDAQT----HQLSWESATERF 430 (562)
Q Consensus 412 --~l~~~ar----~~~sw~~~~~~~ 430 (562)
+|+++++ ++|+|+.+++++
T Consensus 368 ~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 368 ADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 7877776 789999998764
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-31 Score=271.17 Aligned_cols=320 Identities=16% Similarity=0.076 Sum_probs=227.9
Q ss_pred CeEEEEecccCC----CcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhcc
Q 008544 50 QHIAIFTTASLP----WLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRT 125 (562)
Q Consensus 50 ~rI~ivt~~~~P----~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~ 125 (562)
|||+++++.+.| ..||.+..+..++++|.++| |+|+++++......... .+ ..+. .
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g-~~V~v~~~~~~~~~~~~-~~-----~~~~-------------~ 60 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARG-HEVTLFASGDSKTAAPL-VP-----VVPE-------------P 60 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcC-ceEEEEecCCCCcccce-ee-----ccCC-------------C
Confidence 699999998844 88998899999999999998 99999998432111000 00 0000 0
Q ss_pred CCCCCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhh
Q 008544 126 GFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKRE 204 (562)
Q Consensus 126 ~~~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~ 204 (562)
.. ... . ............+.+.+++.+|||||++......+ +.+..+ |++.++|+........
T Consensus 61 ~~-----~~~-~---~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~------~~~~~~~~~v~~~h~~~~~~~~~- 124 (335)
T cd03802 61 LR-----LDA-P---GRDRAEAEALALAERALAAGDFDIVHNHSLHLPLP------FARPLPVPVVTTLHGPPDPELLK- 124 (335)
T ss_pred cc-----ccc-c---hhhHhhHHHHHHHHHHHhcCCCCEEEecCcccchh------hhcccCCCEEEEecCCCCcccch-
Confidence 00 000 0 00011112234467788889999999998776622 222223 8999999765432210
Q ss_pred hchHHHHHHHHHHHHHHHHHhccEEEEcChhhhccCCC--cc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEee
Q 008544 205 KNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYPNS--IV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGR 281 (562)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~--~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr 281 (562)
..... ...+.++++|+..++.... .+ +..+|+|.+.|.+. +.....++|+|+
T Consensus 125 ------------~~~~~--~~~~~~~~~s~~~~~~~~~~~~~~vi~ngvd~~~~~~~-----------~~~~~~i~~~Gr 179 (335)
T cd03802 125 ------------LYYAA--RPDVPFVSISDAQRRPWPPLPWVATVHNGIDLDDYPFR-----------GPKGDYLLFLGR 179 (335)
T ss_pred ------------HHHhh--CcCCeEEEecHHHHhhcccccccEEecCCcChhhCCCC-----------CCCCCEEEEEEe
Confidence 11111 2358899999888885433 22 33468988777641 122567999999
Q ss_pred ccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhc---CCeeEEeCCCCCh--HHHHhhcCEEEEccC-C
Q 008544 282 MVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKL---KLVVRVYPGRDHA--DPIFHDYKVFLNPST-T 355 (562)
Q Consensus 282 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l---~l~~~~~~~~~~~--~~l~~~adv~v~pS~-~ 355 (562)
+.+.||++.+++++.+ .+++|+++|.|++.+.+....... +.++.+.|..++. .++|+.+|++++||. .
T Consensus 180 ~~~~Kg~~~li~~~~~-----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~ 254 (335)
T cd03802 180 ISPEKGPHLAIRAARR-----AGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWE 254 (335)
T ss_pred eccccCHHHHHHHHHh-----cCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccc
Confidence 9999999999998743 479999999998776666655544 3456677765543 489999999999997 6
Q ss_pred CCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeCCHHHHHHHHHHHHhCCCCCccHHHHhcCCHHHHHHHHHHHH
Q 008544 356 DVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYDGRNGFVEATLKALAEEPAQPTDAQTHQLSWESATERFLQVA 434 (562)
Q Consensus 356 E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~~l~~~ar~~~sw~~~~~~~~~~y 434 (562)
|+||++++||||||+|||+++.++ .|++.++.+|++++++++++++|.++++.+.....+.+.++|+|+.++++++++|
T Consensus 255 E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 334 (335)
T cd03802 255 EPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDSVEELAAAVARADRLDRAACRRRAERRFSAARMVDDYLALY 334 (335)
T ss_pred CCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCCHHHHHHHHHHHhccHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999999999999998 9999999999999889999999999876543333334449999999999999998
Q ss_pred H
Q 008544 435 E 435 (562)
Q Consensus 435 ~ 435 (562)
+
T Consensus 335 ~ 335 (335)
T cd03802 335 R 335 (335)
T ss_pred C
Confidence 5
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-31 Score=288.56 Aligned_cols=279 Identities=10% Similarity=-0.003 Sum_probs=203.2
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEE-EEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhcc
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVG-IVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCH 227 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~-~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 227 (562)
...+.+++++.+|||||+|..... ++ +...++..+ |+|. +.|+...... ...+ ......+...+....++
T Consensus 389 ~~~L~~~lk~~kpDIVH~h~~~a~-~l--g~lAa~~~gvPvIv~t~h~~~~~~~----~~~~-~~~~~~l~~~l~~~~~~ 460 (694)
T PRK15179 389 TTKLTDVMRSSVPSVVHIWQDGSI-FA--CALAALLAGVPRIVLSVRTMPPVDR----PDRY-RVEYDIIYSELLKMRGV 460 (694)
T ss_pred HHHHHHHHHHcCCcEEEEeCCcHH-HH--HHHHHHHcCCCEEEEEeCCCccccc----hhHH-HHHHHHHHHHHHhcCCe
Confidence 456888899999999999987664 22 222333333 6554 5665422111 0111 11122222333333345
Q ss_pred EEEEcChhhhc-------cCCCccc-cccccCCCCcCcchhhhH-Hh--hcCCCCCccEEEEEeeccccCCHHHHHHHHH
Q 008544 228 KVIRLSAATQE-------YPNSIVC-NVHGVNPKFLEIGEKKME-QQ--QNGNKAFTKGAYYIGRMVWSKGYEELLGLLN 296 (562)
Q Consensus 228 ~vi~~S~~~~~-------~~~~~~~-~v~GVd~~~~~~~~~~~~-~~--~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~ 296 (562)
.+++.|+..++ .+.+++. ..||||...|.+...... .. ....+++.++|+++||+.+.||++.+++|+.
T Consensus 461 i~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a 540 (694)
T PRK15179 461 ALSSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQ 540 (694)
T ss_pred EEEeCcHHHHHHHHHHcCCChhHEEEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHH
Confidence 66777765543 2223343 347999876654222111 11 1223445678999999999999999999999
Q ss_pred HHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEe
Q 008544 297 IYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVC 374 (562)
Q Consensus 297 ~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~ 374 (562)
++.++.|+++|+|+|+|+..+.+++.++++++. +.|.+..+++..+|+.+|+||+||.+|+||++++|||+||+|||+
T Consensus 541 ~l~~~~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVa 620 (694)
T PRK15179 541 RFAASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLSRRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVT 620 (694)
T ss_pred HHHHHCcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCCcchHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEE
Confidence 998889999999999999999999999999876 445566778889999999999999999999999999999999999
Q ss_pred eCCCC-ccccccCCceEeeC--C--HHHHHHHHHHHHhCCCC--CccHHHH----hcCCHHHHHHHHHHHHHh
Q 008544 375 ANHPS-NDFFKQFPNCRTYD--G--RNGFVEATLKALAEEPA--QPTDAQT----HQLSWESATERFLQVAEL 436 (562)
Q Consensus 375 t~~~~-~e~v~~~~~g~~~~--d--~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw~~~~~~~~~~y~~ 436 (562)
|+.++ .|++.++.+|++++ | +++++++|.+++.+... .++++++ ++|||+.++++++++|++
T Consensus 621 t~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~~ 693 (694)
T PRK15179 621 TLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQM 693 (694)
T ss_pred ECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhCC
Confidence 99998 99999999999984 4 56899999998876543 5666665 789999999999999975
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-31 Score=279.67 Aligned_cols=360 Identities=13% Similarity=0.095 Sum_probs=230.3
Q ss_pred CCeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCC
Q 008544 49 QQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFT 128 (562)
Q Consensus 49 ~~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (562)
.+||+++++.. .|.+.++..+++.|+++| |+|+|++...........-.+++.+.. ....
T Consensus 3 ~~~~~~~~~~~----~~~~~R~~~~a~~L~~~G-~~V~ii~~~~~~~~~~~~~~~~v~~~~---------------~~~~ 62 (415)
T cd03816 3 RKRVCVLVLGD----IGRSPRMQYHALSLAKHG-WKVDLVGYLETPPHDEILSNPNITIHP---------------LPPP 62 (415)
T ss_pred ccEEEEEEecc----cCCCHHHHHHHHHHHhcC-ceEEEEEecCCCCCHHHhcCCCEEEEE---------------CCCC
Confidence 37899998853 566889999999999998 999999872210000000001111110 0000
Q ss_pred CCcccccccccchhccchhhh-HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhh-h
Q 008544 129 STFDTRFYPGKFAADKKSILA-VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKRE-K 205 (562)
Q Consensus 129 ~~~~i~~y~~r~~~~~~~~~~-~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~-~ 205 (562)
+ ......+............ +.-+..+++..+||+||++++........+..+++..+ |+|.++|+.+....... +
T Consensus 63 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~~~ 141 (415)
T cd03816 63 P-QRLNKLPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALKLG 141 (415)
T ss_pred c-cccccchHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcccC
Confidence 0 0000000000000000000 11123345667899999998655422111222333334 88999997543222111 1
Q ss_pred chHHHHHHHHHHHHHHHHHhccEEEEcChhhhccC------CCccccc-cccCCCCcCcchhhhHHhh------------
Q 008544 206 NDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYP------NSIVCNV-HGVNPKFLEIGEKKMEQQQ------------ 266 (562)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~------~~~~~~v-~GVd~~~~~~~~~~~~~~~------------ 266 (562)
.......+...+.+++.+. ||.+|++|+.+++.. .+.+..+ +|. ...|.+.........
T Consensus 142 ~~~~~~~~~~~~e~~~~~~-ad~ii~vS~~~~~~l~~~~~~~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~~~~~~~~~~~ 219 (415)
T cd03816 142 ENHPLVRLAKWYEKLFGRL-ADYNLCVTKAMKEDLQQFNNWKIRATVLYDRP-PEQFRPLPLEEKHELFLKLAKTFLTRE 219 (415)
T ss_pred CCCHHHHHHHHHHHHHhhc-CCEeeecCHHHHHHHHhhhccCCCeeecCCCC-HHHceeCcHHHHHHHHHhccccccccc
Confidence 1111223555556666665 899999999888732 2333333 453 333333221111110
Q ss_pred -----cCC-CCCccEEEEEeeccccCCHHHHHHHHHHHHHh------cCCcEEEEEeCCCCHHHHHHHHHhcCCeeE-Ee
Q 008544 267 -----NGN-KAFTKGAYYIGRMVWSKGYEELLGLLNIYHKE------LAGLEMDLYGNGEDFDQIQRAAKKLKLVVR-VY 333 (562)
Q Consensus 267 -----~~~-~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~------~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~-~~ 333 (562)
.+. ++...+++++||+.+.||++.+++|+..+.+. .|+++|+|+|+|+..+++++.+++++++.. ++
T Consensus 220 ~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~~~~~ 299 (415)
T cd03816 220 LRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLKEKYLERIKELKLKKVTIR 299 (415)
T ss_pred cccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCccHHHHHHHHHHcCCCcEEEE
Confidence 011 23345788899999999999999999998752 478999999999999999999999988644 45
Q ss_pred CC---CCChHHHHhhcCEEEEcc---CCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeCCHHHHHHHHHHHH
Q 008544 334 PG---RDHADPIFHDYKVFLNPS---TTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYDGRNGFVEATLKAL 406 (562)
Q Consensus 334 ~~---~~~~~~l~~~adv~v~pS---~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~d~~~la~~i~~ll 406 (562)
++ .++..++|+.+|+++.|+ ..|++|++++||||||+|||+++.++ .|++.++.+|++++|+++++++|.+++
T Consensus 300 ~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~d~~~la~~i~~ll 379 (415)
T cd03816 300 TPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFGDSEELAEQLIDLL 379 (415)
T ss_pred cCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEECCHHHHHHHHHHHH
Confidence 54 356669999999999753 35789999999999999999999987 999999999999999999999999999
Q ss_pred hC---CCC--CccHHHH--hcCCHHHHHHHHH
Q 008544 407 AE---EPA--QPTDAQT--HQLSWESATERFL 431 (562)
Q Consensus 407 ~~---~~~--~l~~~ar--~~~sw~~~~~~~~ 431 (562)
+| ++. +|+++++ .+++|+...++.+
T Consensus 380 ~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~ 411 (415)
T cd03816 380 SNFPNRGKLNSLKKGAQEESELRWDENWDRVV 411 (415)
T ss_pred hcCCCHHHHHHHHHHHHHhhhcCHHHHHHHHh
Confidence 99 554 8888887 7788888776654
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=287.39 Aligned_cols=381 Identities=14% Similarity=0.116 Sum_probs=239.8
Q ss_pred cCCeEEEEecccCCC--cccccccHHHHHHHHHHcCCCeEEEEeecCCccccccc-cCC-----Cce--eCCchh-h---
Q 008544 48 KQQHIAIFTTASLPW--LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQV-YPG-----NIT--FASPKE-Q--- 113 (562)
Q Consensus 48 ~~~rI~ivt~~~~P~--~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~-~p~-----~i~--~~~~~~-~--- 113 (562)
+.|||++|+.-..|+ .||-+-.+-.|.++|+++| |+|.|+.|.+........ .+. .+. +..... .
T Consensus 4 ~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g-~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (489)
T PRK14098 4 RNFKVLYVSGEVSPFVRVSALADFMASFPQALEEEG-FEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVK 82 (489)
T ss_pred CCcEEEEEeecchhhcccchHHHHHHHHHHHHHHCC-CeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEE
Confidence 348999999888887 5777777888999999998 999999998755322100 000 000 000000 0
Q ss_pred HH-----HHHHHhhhccCCCCCcccccccc-----cc-hhccchhhhHHhHHhhcC--cCCCcEEEecCCchhhhhhchH
Q 008544 114 EA-----YVRWWLEDRTGFTSTFDTRFYPG-----KF-AADKKSILAVGDITEIIP--DEEADIAVLEEPEHLTWFHHGK 180 (562)
Q Consensus 114 ~~-----~~~~~~~~~~~~~~~~~i~~y~~-----r~-~~~~~~~~~~~~l~~~i~--~~~pDvV~~~~~~~~~~~~~~~ 180 (562)
.. .+..++-..-.++..- ..|.. -| ....+..+-.....++++ ..+|||||+|+.... +. +.
T Consensus 83 ~~~~~~~~v~~~~~~~~~~f~r~--~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~-l~--~~ 157 (489)
T PRK14098 83 VTALPSSKIQTYFLYNEKYFKRN--GLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAG-LV--PL 157 (489)
T ss_pred EecccCCCceEEEEeCHHHcCCC--CcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHH-HH--HH
Confidence 00 0000000000000000 01100 00 011111111112223333 358999999985443 33 22
Q ss_pred HHHhhc--------CCEEEEEcCCcHHHHh----hhh-c-hHHHHHH------HHHHHHHHHHHhccEEEEcChhhhccC
Q 008544 181 RWKAKF--------RFVVGIVHTNYLEYVK----REK-N-DRLQAFL------LEFVNSWLARVHCHKVIRLSAATQEYP 240 (562)
Q Consensus 181 ~~~~~~--------~~vi~~~h~~~~~~~~----~~~-~-~~~~~~~------~~~~~~~~~~~~ad~vi~~S~~~~~~~ 240 (562)
.+..+. .|.|.++|+...+... ... . ....... ...+..-+. +||.|+++|+..++..
T Consensus 158 ~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~--~ad~VitVS~~~a~ei 235 (489)
T PRK14098 158 LLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVE--HADLLTTTSPRYAEEI 235 (489)
T ss_pred HHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHH--hcCcceeeCHHHHHHh
Confidence 222221 3899999975321100 000 0 0000000 001111111 4899999998777521
Q ss_pred C------------------CccccccccCCCCcCcchhh-------------------hHHhhcCCC--CCccEEEEEee
Q 008544 241 N------------------SIVCNVHGVNPKFLEIGEKK-------------------MEQQQNGNK--AFTKGAYYIGR 281 (562)
Q Consensus 241 ~------------------~~~~~v~GVd~~~~~~~~~~-------------------~~~~~~~~~--~~~~~il~vGr 281 (562)
. +...+.||||.+.|.|.... ...+..+++ ++.++++++||
T Consensus 236 ~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgR 315 (489)
T PRK14098 236 AGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIIN 315 (489)
T ss_pred CcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEecc
Confidence 1 12234579999877764321 122334544 35689999999
Q ss_pred ccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCC--HHHHHHHHHhcCCeeEEeCCCCCh--HHHHhhcCEEEEccCCCC
Q 008544 282 MVWSKGYEELLGLLNIYHKELAGLEMDLYGNGED--FDQIQRAAKKLKLVVRVYPGRDHA--DPIFHDYKVFLNPSTTDV 357 (562)
Q Consensus 282 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~--~~~l~~~~~~l~l~~~~~~~~~~~--~~l~~~adv~v~pS~~E~ 357 (562)
+.++||++.+++|+.++.+. +++|+|+|+|+. .+.+++++++++.++.+.++.++. ..+|+.+|+|++||..|+
T Consensus 316 l~~~KG~d~li~a~~~l~~~--~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~ 393 (489)
T PRK14098 316 FDDFQGAELLAESLEKLVEL--DIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAGLDMLLMPGKIES 393 (489)
T ss_pred ccccCcHHHHHHHHHHHHhc--CcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHHhCCEEEeCCCCCC
Confidence 99999999999999998753 799999999875 478888888887667777776554 489999999999999999
Q ss_pred CcHHHHHHHHcCCcEEeeCCCC-cccccc----CCceEeeC--CHHHHHHHHHHHH---hCCCC--CccHHHH-hcCCHH
Q 008544 358 VCTATAEALAMGKIVVCANHPS-NDFFKQ----FPNCRTYD--GRNGFVEATLKAL---AEEPA--QPTDAQT-HQLSWE 424 (562)
Q Consensus 358 ~~~~~lEAma~G~PVI~t~~~~-~e~v~~----~~~g~~~~--d~~~la~~i~~ll---~~~~~--~l~~~ar-~~~sw~ 424 (562)
||++.+|||+||+|+|+++.|| .|.+.+ +.+|++++ |+++++++|.+++ ++++. .+++++. +.|||+
T Consensus 394 ~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~~~~~fsw~ 473 (489)
T PRK14098 394 CGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEAMERDFSWK 473 (489)
T ss_pred chHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhcCCCChH
Confidence 9999999999999999999988 777753 67999974 9999999999876 34433 5555554 889999
Q ss_pred HHHHHHHHHHHhcC
Q 008544 425 SATERFLQVAELVG 438 (562)
Q Consensus 425 ~~~~~~~~~y~~~~ 438 (562)
.++++++++|+...
T Consensus 474 ~~a~~y~~lY~~~~ 487 (489)
T PRK14098 474 NSAEEYAQLYRELL 487 (489)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-31 Score=283.69 Aligned_cols=367 Identities=16% Similarity=0.151 Sum_probs=236.8
Q ss_pred eEEEEecccCCC--cccccccHHHHHHHHHHcCCCeEEEEeecCCccccccc-cC------------------------C
Q 008544 51 HIAIFTTASLPW--LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQV-YP------------------------G 103 (562)
Q Consensus 51 rI~ivt~~~~P~--~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~-~p------------------------~ 103 (562)
||++||.-+.|+ .||.+..+..|+++|++.| |+|+|++|.+........ .. +
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G-~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLG-HDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVD 79 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCC-CeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeC
Confidence 699999887776 7999999999999999998 999999996643211100 00 0
Q ss_pred CceeCCchhhHHHHHHHhhhccCCCCCcccccccccchhccchhhhHHhHHhhcC--cCCCcEEEecCCchhhhhhchHH
Q 008544 104 NITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIP--DEEADIAVLEEPEHLTWFHHGKR 181 (562)
Q Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~--~~~pDvV~~~~~~~~~~~~~~~~ 181 (562)
++.+.-.+... +. .+.... ......|... ..+..+-.....+++. ..+|||||+|+.... +. +..
T Consensus 80 gv~~~~l~~~~-----~~-~~~~~~-~~~~~~~~~~---~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~-~~--~~~ 146 (476)
T cd03791 80 GVPVYFLDNPD-----YF-DRPGLY-DDSGYDYEDN---AERFALFSRAALELLRRLGWKPDIIHCHDWHTG-LV--PAL 146 (476)
T ss_pred CceEEEEcChH-----Hc-CCCCCC-CccCCCCccH---HHHHHHHHHHHHHHHHhcCCCCcEEEECchHHH-HH--HHH
Confidence 11100000000 00 000000 0000000100 0000111111223333 378999999987654 22 222
Q ss_pred HHhh-------cCCEEEEEcCCcHHHHhhhhchHHHHH--------HH--------HHHHHHHHHHhccEEEEcChhhhc
Q 008544 182 WKAK-------FRFVVGIVHTNYLEYVKREKNDRLQAF--------LL--------EFVNSWLARVHCHKVIRLSAATQE 238 (562)
Q Consensus 182 ~~~~-------~~~vi~~~h~~~~~~~~~~~~~~~~~~--------~~--------~~~~~~~~~~~ad~vi~~S~~~~~ 238 (562)
++.. ..|+|.++|+...... .....+... .. ..+.+...+ +||.++++|+..++
T Consensus 147 l~~~~~~~~~~~~~~v~tiH~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ad~v~~vS~~~~~ 223 (476)
T cd03791 147 LKEKYADPFFKNIKTVFTIHNLAYQGV--FPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIV-YADAVTTVSPTYAR 223 (476)
T ss_pred HHHhhccccCCCCCEEEEeCCCCCCCC--CCHHHHHHcCCCccchhhhcccccCCcccHHHHHHH-hcCcCeecCHhHHH
Confidence 3333 2389999997532110 000000000 00 011111222 38999999977665
Q ss_pred cCC-----------------CccccccccCCCCcCcchhh-------------------hHHhhcCCC--CCccEEEEEe
Q 008544 239 YPN-----------------SIVCNVHGVNPKFLEIGEKK-------------------MEQQQNGNK--AFTKGAYYIG 280 (562)
Q Consensus 239 ~~~-----------------~~~~~v~GVd~~~~~~~~~~-------------------~~~~~~~~~--~~~~~il~vG 280 (562)
... +.....||||.+.+.+.... ..++..+++ ++.++++|+|
T Consensus 224 ~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vG 303 (476)
T cd03791 224 EILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVG 303 (476)
T ss_pred HhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEe
Confidence 221 22344579999877654322 123345553 6688999999
Q ss_pred eccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCC--HHHHHHHHHhcCCeeEEeCCCCCh--HHHHhhcCEEEEccCCC
Q 008544 281 RMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGED--FDQIQRAAKKLKLVVRVYPGRDHA--DPIFHDYKVFLNPSTTD 356 (562)
Q Consensus 281 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~--~~~l~~~~~~l~l~~~~~~~~~~~--~~l~~~adv~v~pS~~E 356 (562)
|+.++||++.+++++.++.++ +++|+++|.|+. .+.++++++++..++.++++.++. ..+|+.+|++++||..|
T Consensus 304 rl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E 381 (476)
T cd03791 304 RLTEQKGIDLLLEALPELLEL--GGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFE 381 (476)
T ss_pred eccccccHHHHHHHHHHHHHc--CcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCEEECCCCCC
Confidence 999999999999999998765 499999999864 366777777665556666665533 37899999999999999
Q ss_pred CCcHHHHHHHHcCCcEEeeCCCC-ccccccCC------ceEeeC--CHHHHHHHHHHHHhCCC---C--CccHHHH-hcC
Q 008544 357 VVCTATAEALAMGKIVVCANHPS-NDFFKQFP------NCRTYD--GRNGFVEATLKALAEEP---A--QPTDAQT-HQL 421 (562)
Q Consensus 357 ~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~------~g~~~~--d~~~la~~i~~ll~~~~---~--~l~~~ar-~~~ 421 (562)
+||++++|||+||+|||+++.|+ .|++.++. +|++++ |+++++++|.++++... . +|++++. +.|
T Consensus 382 ~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~f 461 (476)
T cd03791 382 PCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMAQDF 461 (476)
T ss_pred CCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhccCC
Confidence 99999999999999999999998 99999887 999984 89999999999886432 2 5666665 789
Q ss_pred CHHHHHHHHHHHHHh
Q 008544 422 SWESATERFLQVAEL 436 (562)
Q Consensus 422 sw~~~~~~~~~~y~~ 436 (562)
+|+.++++++++|+.
T Consensus 462 sw~~~a~~~~~~y~~ 476 (476)
T cd03791 462 SWDRSAKEYLELYRS 476 (476)
T ss_pred ChHHHHHHHHHHHhC
Confidence 999999999999963
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=273.25 Aligned_cols=254 Identities=17% Similarity=0.216 Sum_probs=198.2
Q ss_pred CcCCCcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChh
Q 008544 158 PDEEADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAA 235 (562)
Q Consensus 158 ~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~ 235 (562)
...++||||+|+...+ + ..+..+.. +.+.++|..+... .+.+ ++.++++|+.
T Consensus 96 ~~~~~~vi~v~~~~~~--~---~~~~~~~~~~~~v~~~h~~~~~~-------------------~~~~--~~~ii~~S~~ 149 (380)
T PRK15484 96 TITKDSVIVIHNSMKL--Y---RQIRERAPQAKLVMHMHNAFEPE-------------------LLDK--NAKIIVPSQF 149 (380)
T ss_pred CCCCCcEEEEeCcHHh--H---HHHHhhCCCCCEEEEEecccChh-------------------Hhcc--CCEEEEcCHH
Confidence 3467999999986544 2 22334333 7888899553211 0112 5999999988
Q ss_pred hhccC-----CCccc-cccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEE
Q 008544 236 TQEYP-----NSIVC-NVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDL 309 (562)
Q Consensus 236 ~~~~~-----~~~~~-~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i 309 (562)
.++.. ...+. ..+|+|.+.|.+......+...+.+.+.++++|+||+.+.||++.+++|+.++.++.|+++|+|
T Consensus 150 ~~~~~~~~~~~~~i~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvi 229 (380)
T PRK15484 150 LKKFYEERLPNADISIVPNGFCLETYQSNPQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVV 229 (380)
T ss_pred HHHHHHhhCCCCCEEEecCCCCHHHcCCcchHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEE
Confidence 88742 22333 3379998777654444344556666667889999999999999999999999998899999999
Q ss_pred EeCCCC---------HHHHHHHHHhcCCeeEEeCCC--CChHHHHhhcCEEEEccC-CCCCcHHHHHHHHcCCcEEeeCC
Q 008544 310 YGNGED---------FDQIQRAAKKLKLVVRVYPGR--DHADPIFHDYKVFLNPST-TDVVCTATAEALAMGKIVVCANH 377 (562)
Q Consensus 310 vG~g~~---------~~~l~~~~~~l~l~~~~~~~~--~~~~~l~~~adv~v~pS~-~E~~~~~~lEAma~G~PVI~t~~ 377 (562)
+|+|+. .+.+++.+++++.++.+.+.. ++..++|+.+|++|+||. .|+||++++||||||+|||+|+.
T Consensus 230 vG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~ 309 (380)
T PRK15484 230 VGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTK 309 (380)
T ss_pred EeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCC
Confidence 998753 135666777777777776664 356699999999999997 59999999999999999999999
Q ss_pred CC-ccccccCCceEe-e--CCHHHHHHHHHHHHhCCCC-CccHHHH----hcCCHHHHHHHHHHHHHhc
Q 008544 378 PS-NDFFKQFPNCRT-Y--DGRNGFVEATLKALAEEPA-QPTDAQT----HQLSWESATERFLQVAELV 437 (562)
Q Consensus 378 ~~-~e~v~~~~~g~~-~--~d~~~la~~i~~ll~~~~~-~l~~~ar----~~~sw~~~~~~~~~~y~~~ 437 (562)
|+ .|++.++.+|++ + .|+++++++|.++++|++. +|+++++ ++|+|+.++++++++|+..
T Consensus 310 gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 310 GGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPELTQIAEQAKDFVFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred CCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 98 999999999984 3 3999999999999998875 7777776 7899999999999999753
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-30 Score=274.62 Aligned_cols=350 Identities=13% Similarity=0.040 Sum_probs=219.2
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||++|...|++. ...+++.|.++| |+|+++|...... .+.+++...... .....
T Consensus 1 ~il~~~~~~p~~-------~~~la~~L~~~G-~~v~~~~~~~~~~-----~~~~v~~~~~~~-------------~~~~~ 54 (396)
T cd03818 1 RILFVHQNFPGQ-------FRHLAPALAAQG-HEVVFLTEPNAAP-----PPGGVRVVRYRP-------------PRGPT 54 (396)
T ss_pred CEEEECCCCchh-------HHHHHHHHHHCC-CEEEEEecCCCCC-----CCCCeeEEEecC-------------CCCCC
Confidence 689998888543 345999999997 9999998833211 111111110000 00000
Q ss_pred cccccccccchhccchhhh-HHhHHhh-cCcCCCcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcHH------H
Q 008544 131 FDTRFYPGKFAADKKSILA-VGDITEI-IPDEEADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYLE------Y 200 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~-~~~l~~~-i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~~------~ 200 (562)
.....|...+......... ...+..+ .+..+||+||+|.......+ +...+. |++.+.|..+.. +
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~~~~-----l~~~~~~~~~v~~~~~~~~~~~~~~~~ 129 (396)
T cd03818 55 SGTHPYLREFEEAVLRGQAVARALLALRAKGFRPDVIVAHPGWGETLF-----LKDVWPDAPLIGYFEFYYRAEGADVGF 129 (396)
T ss_pred CCCCccchhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccchhhh-----HHHhCCCCCEEEEEeeeecCCCCCCCC
Confidence 0011111111111111111 1122222 34568999999976544323 333333 677665422211 1
Q ss_pred HhhhhchHH-HHHHHHHH--HHHHHHHhccEEEEcChhhhccCC----Ccc-ccccccCCCCcCcchhhhHHh--hcCCC
Q 008544 201 VKREKNDRL-QAFLLEFV--NSWLARVHCHKVIRLSAATQEYPN----SIV-CNVHGVNPKFLEIGEKKMEQQ--QNGNK 270 (562)
Q Consensus 201 ~~~~~~~~~-~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~~~----~~~-~~v~GVd~~~~~~~~~~~~~~--~~~~~ 270 (562)
......... ..++.... .....+ .+|.+|++|+..++... +.+ +..+|+|.+.|.+........ ...+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~ad~vi~~s~~~~~~~~~~~~~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~~~ 208 (396)
T cd03818 130 DPEFPPSLDDALRLRNRNALILLALA-QADAGVSPTRWQRSTFPAELRSRISVIHDGIDTDRLRPDPQARLRLPNGRVLT 208 (396)
T ss_pred CCCCCCchhHHHHHHHhhhHhHHHHH-hCCEEECCCHHHHhhCcHhhccceEEeCCCccccccCCCchhhhcccccccCC
Confidence 100001100 01111110 111222 38999999998888432 233 334699998887654322111 12234
Q ss_pred CCccEEEEEee-ccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCC---------HHHHHHHHHhcC----C-eeEEeCC
Q 008544 271 AFTKGAYYIGR-MVWSKGYEELLGLLNIYHKELAGLEMDLYGNGED---------FDQIQRAAKKLK----L-VVRVYPG 335 (562)
Q Consensus 271 ~~~~~il~vGr-~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~---------~~~l~~~~~~l~----l-~~~~~~~ 335 (562)
++.++++|+|| +.+.||++.+++|+..+.++.|+++|+|+|++.. ....++..++++ . ++.+.+.
T Consensus 209 ~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~ 288 (396)
T cd03818 209 PGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGR 288 (396)
T ss_pred CCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCC
Confidence 55778999997 9999999999999999998899999999997421 112222233322 2 3555565
Q ss_pred CC--ChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCC
Q 008544 336 RD--HADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEP 410 (562)
Q Consensus 336 ~~--~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~ 410 (562)
.+ +..++|+.+|++++||..|++|++++||||||+|||+|+.++ .|++.++.+|++++ |+++++++|.++++|++
T Consensus 289 v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~ 368 (396)
T cd03818 289 VPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPA 368 (396)
T ss_pred CCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHH
Confidence 43 445899999999999999999999999999999999999998 99999999999974 99999999999999987
Q ss_pred C--CccHHHH----hcCCHHHHHHHHHH
Q 008544 411 A--QPTDAQT----HQLSWESATERFLQ 432 (562)
Q Consensus 411 ~--~l~~~ar----~~~sw~~~~~~~~~ 432 (562)
. +|+++++ ++|+|+.+++++++
T Consensus 369 ~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 369 RRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 5 7888777 66999999998863
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.7e-30 Score=264.34 Aligned_cols=352 Identities=19% Similarity=0.145 Sum_probs=248.9
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||++++..++|..+|.+.....++++|.+.| |+|+++++............ .. .. ...
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g-~~v~i~~~~~~~~~~~~~~~-----~~-~~------------~~~--- 58 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARG-HEVTVLTPGDGGLPDEEEVG-----GI-VV------------VRP--- 58 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcC-ceEEEEecCCCCCCceeeec-----Cc-ce------------ecC---
Confidence 6999999998877888999999999999987 99999988432111100000 00 00 000
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHH
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRL 209 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~ 209 (562)
..................+.+.+++.+||+||++.+....... ......+ |++.++|+.+....... ...
T Consensus 59 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~---~~~~~~~~~~i~~~h~~~~~~~~~~--~~~ 129 (374)
T cd03801 59 ----PPLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAA---LAARLLGIPLVLTVHGLEFGRPGNE--LGL 129 (374)
T ss_pred ----CcccccchhHHHHHHHHHHHHHhhhcCCcEEEEechhHHHHHH---HHHHhcCCcEEEEeccchhhccccc--hhH
Confidence 0000000001111123346677788899999999987774431 2333333 89999997755432211 111
Q ss_pred HHHHHHHHHHHHHHHhccEEEEcChhhhccCCC-------cc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEee
Q 008544 210 QAFLLEFVNSWLARVHCHKVIRLSAATQEYPNS-------IV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGR 281 (562)
Q Consensus 210 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~-------~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr 281 (562)
.............+. +|.+++.|+..++...+ .+ ...+|++...+.+.. ...........+.+.++|+|+
T Consensus 130 ~~~~~~~~~~~~~~~-~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~g~ 207 (374)
T cd03801 130 LLKLARALERRALRR-ADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAP-RAARRRLGIPEDEPVILFVGR 207 (374)
T ss_pred HHHHHHHHHHHHHHh-CCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCccc-hHHHhhcCCcCCCeEEEEecc
Confidence 222333333333333 79999999888773221 22 223588877665432 222223344455788999999
Q ss_pred ccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCC--CChHHHHhhcCEEEEccCCCC
Q 008544 282 MVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGR--DHADPIFHDYKVFLNPSTTDV 357 (562)
Q Consensus 282 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~--~~~~~l~~~adv~v~pS~~E~ 357 (562)
+.+.||++.+++++..+.++.++++|+++|.++..+.+++.+++++.. +.+.+.. ++..++|+.||++++||..|+
T Consensus 208 ~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~ 287 (374)
T cd03801 208 LVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEG 287 (374)
T ss_pred hhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhcc
Confidence 999999999999999998888899999999888888888887666654 4455555 677799999999999999999
Q ss_pred CcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH----hcCCHHHHHH
Q 008544 358 VCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT----HQLSWESATE 428 (562)
Q Consensus 358 ~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw~~~~~ 428 (562)
+|++++|||+||+|||+++.++ .+++.++.+|++++ |+++++++|.++++++.. .++++++ +.|+|+..++
T Consensus 288 ~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (374)
T cd03801 288 FGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAA 367 (374)
T ss_pred ccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 9999999999999999999887 89999899999985 689999999999998875 6666655 8999999999
Q ss_pred HHHHHHH
Q 008544 429 RFLQVAE 435 (562)
Q Consensus 429 ~~~~~y~ 435 (562)
++.++|+
T Consensus 368 ~~~~~~~ 374 (374)
T cd03801 368 RTEEVYY 374 (374)
T ss_pred HHHHhhC
Confidence 9999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-30 Score=263.46 Aligned_cols=329 Identities=16% Similarity=0.143 Sum_probs=232.6
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccC--CCceeCCchhhHHHHHHHhhhccCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYP--GNITFASPKEQEAYVRWWLEDRTGFT 128 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p--~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (562)
||++++..+.| .||.+.....++++|.+.| |+|++++..... ...+. .++.+..... ..
T Consensus 1 kI~i~~~~~~~-~gG~~~~~~~l~~~L~~~g-~~v~v~~~~~~~---~~~~~~~~~~~~~~~~~-------------~~- 61 (348)
T cd03820 1 KILFVIPSLGN-AGGAERVLSNLANALAEKG-HEVTIISLDKGE---PPFYELDPKIKVIDLGD-------------KR- 61 (348)
T ss_pred CeEEEeccccC-CCChHHHHHHHHHHHHhCC-CeEEEEecCCCC---CCccccCCccceeeccc-------------cc-
Confidence 68999988877 7888888999999999987 999999883321 01111 1111000000 00
Q ss_pred CCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchH
Q 008544 129 STFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDR 208 (562)
Q Consensus 129 ~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~ 208 (562)
.. ...........+.+++++.+||+||++.+....+. ..+..+..+++...|..+.......
T Consensus 62 --~~---------~~~~~~~~~~~~~~~l~~~~~d~i~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~---- 123 (348)
T cd03820 62 --DS---------KLLARFKKLRRLRKLLKNNKPDVVISFLTSLLTFL---ASLGLKIVKLIVSEHNSPDAYKKRL---- 123 (348)
T ss_pred --cc---------chhccccchHHHHHhhcccCCCEEEEcCchHHHHH---HHHhhccccEEEecCCCccchhhhh----
Confidence 00 00111112345778888899999999998733222 2222222378888887654332110
Q ss_pred HHHHHHHHHHHHHHHHhccEEEEcChhhhcc----CCCc-cccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeecc
Q 008544 209 LQAFLLEFVNSWLARVHCHKVIRLSAATQEY----PNSI-VCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMV 283 (562)
Q Consensus 209 ~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~----~~~~-~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~ 283 (562)
......+...+. +|.+++.|+..+.. .... ....+|++...+.+. .....+.++|+|++.
T Consensus 124 ----~~~~~~~~~~~~-~d~ii~~s~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~----------~~~~~~~i~~~g~~~ 188 (348)
T cd03820 124 ----RRLLLRRLLYRR-ADAVVVLTEEDRALYYKKFNKNVVVIPNPLPFPPEEPS----------SDLKSKRILAVGRLV 188 (348)
T ss_pred ----HHHHHHHHHHhc-CCEEEEeCHHHHHHhhccCCCCeEEecCCcChhhcccc----------CCCCCcEEEEEEeec
Confidence 111122333333 79999999888531 1122 222346665543321 223467899999999
Q ss_pred ccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCee--EEeCCCCChHHHHhhcCEEEEccCCCCCcHH
Q 008544 284 WSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVV--RVYPGRDHADPIFHDYKVFLNPSTTDVVCTA 361 (562)
Q Consensus 284 ~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~--~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~ 361 (562)
+.||++.+++++..+.+..|+++|+++|.+++.+.+++.+++.++.. .+.+..+++.++|+.||++++||..|++|++
T Consensus 189 ~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~i~ps~~e~~~~~ 268 (348)
T cd03820 189 PQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPEREALEALIKELGLEDRVILLGFTKNIEEYYAKASIFVLTSRFEGFPMV 268 (348)
T ss_pred cccCHHHHHHHHHHHHhcCCCeEEEEEeCCCCHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCEEEeCccccccCHH
Confidence 99999999999999988889999999999999888888888887654 3455568888999999999999999999999
Q ss_pred HHHHHHcCCcEEeeCCCC--ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH---hcCCHHHHHHHHH
Q 008544 362 TAEALAMGKIVVCANHPS--NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT---HQLSWESATERFL 431 (562)
Q Consensus 362 ~lEAma~G~PVI~t~~~~--~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar---~~~sw~~~~~~~~ 431 (562)
++|||+||+|||+++.++ .+++.++.+|++++ |+++++++|.++++|++. .|+++++ ++|+|+++++++.
T Consensus 269 ~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 269 LLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 999999999999999764 66777777999885 889999999999998875 6777665 8999999998875
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.5e-30 Score=264.71 Aligned_cols=353 Identities=16% Similarity=0.083 Sum_probs=232.2
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||++++..+.|..||.+..+..++++|.+.| |+|+++++........ ............. ..
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~g-~~v~v~~~~~~~~~~~-~~~~~~~~~~~~~-------------~~--- 62 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKLG-HEVTVATTDAGGDPLL-VALNGVPVKLFSI-------------NV--- 62 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhcC-CcEEEEecCCCCccch-hhccCceeeeccc-------------ch---
Confidence 6999999998899999999999999999998 9999998733111000 0000000000000 00
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHH
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRL 209 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~ 209 (562)
... .... .................++|+||+++........ ...+.++.+ |++...|+....+.. ....+
T Consensus 63 --~~~-~~~~---~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~ 133 (375)
T cd03821 63 --AYG-LNLA---RYLFPPSLLAWLRLNIREADIVHVHGLWSYPSLA-AARAARKYGIPYVVSPHGMLDPWAL--PHKAL 133 (375)
T ss_pred --hhh-hhhh---hhccChhHHHHHHHhCCCCCEEEEecccchHHHH-HHHHHHHhCCCEEEEcccccccccc--ccchh
Confidence 000 0000 0000001112223345689999999864442221 222333334 889999976544331 11111
Q ss_pred HHHHHHHH-HHHHHHHhccEEEEcChhhhcc-----CCCcc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeec
Q 008544 210 QAFLLEFV-NSWLARVHCHKVIRLSAATQEY-----PNSIV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRM 282 (562)
Q Consensus 210 ~~~~~~~~-~~~~~~~~ad~vi~~S~~~~~~-----~~~~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~ 282 (562)
...+.... .....+ .++.+++.|...... +...+ ...+|+|.+.+.+......+...+.+.+.++++|+|++
T Consensus 134 ~~~~~~~~~~~~~~~-~~~~i~~~s~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~ 212 (375)
T cd03821 134 KKRLAWFLFERRLLQ-AAAAVHATSEQEAAEIRRLGLKAPIAVIPNGVDIPPFAALPSRGRRRKFPILPDKRIILFLGRL 212 (375)
T ss_pred hhHHHHHHHHHHHHh-cCCEEEECCHHHHHHHHhhCCcccEEEcCCCcChhccCcchhhhhhhhccCCCCCcEEEEEeCc
Confidence 22222211 222222 378888888555442 22223 33468888766543322223344556668899999999
Q ss_pred cccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCC--HHHHHHHHHhcCCe--eEEeCCCC--ChHHHHhhcCEEEEccCCC
Q 008544 283 VWSKGYEELLGLLNIYHKELAGLEMDLYGNGED--FDQIQRAAKKLKLV--VRVYPGRD--HADPIFHDYKVFLNPSTTD 356 (562)
Q Consensus 283 ~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~--~~~l~~~~~~l~l~--~~~~~~~~--~~~~l~~~adv~v~pS~~E 356 (562)
.+.||++.+++++..+.++.++++|+++|.++. ...++..++++++. +.+++..+ +..++|+.||++++||..|
T Consensus 213 ~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e 292 (375)
T cd03821 213 HPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSE 292 (375)
T ss_pred chhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEeccccC
Confidence 999999999999999998889999999998654 34555555666664 44555555 5558999999999999999
Q ss_pred CCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC-CHHHHHHHHHHHHhCCCC--CccHHHH----hcCCHHHHHH
Q 008544 357 VVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD-GRNGFVEATLKALAEEPA--QPTDAQT----HQLSWESATE 428 (562)
Q Consensus 357 ~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~-d~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw~~~~~ 428 (562)
+||++++|||+||+|||+++.++ .+++.+ ..|++++ ++++++++|.++++++.. .++++++ ++|+|+.+++
T Consensus 293 ~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 371 (375)
T cd03821 293 NFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDDDVDALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQ 371 (375)
T ss_pred CCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 99999999999999999999988 888887 7788775 679999999999999854 6776665 8999999999
Q ss_pred HHHH
Q 008544 429 RFLQ 432 (562)
Q Consensus 429 ~~~~ 432 (562)
++++
T Consensus 372 ~~~~ 375 (375)
T cd03821 372 QLLE 375 (375)
T ss_pred HhhC
Confidence 8763
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-30 Score=278.91 Aligned_cols=267 Identities=16% Similarity=0.164 Sum_probs=202.9
Q ss_pred CCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhh------hchHHHHHHHHHH---HHHHHHHhccEE
Q 008544 160 EEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKRE------KNDRLQAFLLEFV---NSWLARVHCHKV 229 (562)
Q Consensus 160 ~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~------~~~~~~~~~~~~~---~~~~~~~~ad~v 229 (562)
.++|++|+|+....++. +..+++..+ |+|.+.|+.+....... ..+..+..+.+.+ .+...+ .||.|
T Consensus 172 ~~~dviH~~s~~~~g~~--~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~ad~I 248 (475)
T cd03813 172 PKADVYHAVSTGYAGLL--GALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQ-AADRI 248 (475)
T ss_pred CCCCEEeccCcchHHHH--HHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHH-hCCEE
Confidence 47899999987555444 344555545 89999998765321110 0122222232222 222333 38999
Q ss_pred EEcChhhhcc------CCCcc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhc
Q 008544 230 IRLSAATQEY------PNSIV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKEL 302 (562)
Q Consensus 230 i~~S~~~~~~------~~~~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~ 302 (562)
+++|+..++. +.+++ +..||+|.+.|.+.... ...++.++|+|+||+.+.||++.+++|+..+.++.
T Consensus 249 i~~s~~~~~~~~~~g~~~~ki~vIpNgid~~~f~~~~~~------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~ 322 (475)
T cd03813 249 TTLYEGNRERQIEDGADPEKIRVIPNGIDPERFAPARRA------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKI 322 (475)
T ss_pred EecCHHHHHHHHHcCCCHHHeEEeCCCcCHHHcCCcccc------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhC
Confidence 9999887763 22223 33469988776543221 12344688999999999999999999999999889
Q ss_pred CCcEEEEEeCCCC----HHHHHHHHHhcCCeeEE-eCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCC
Q 008544 303 AGLEMDLYGNGED----FDQIQRAAKKLKLVVRV-YPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANH 377 (562)
Q Consensus 303 ~~~~l~ivG~g~~----~~~l~~~~~~l~l~~~~-~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~ 377 (562)
|+++|+|+|.|+. .++++++++++++..++ +.|.++..++|+.+|++|+||..|++|++++||||||+|||+|+.
T Consensus 323 p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~ 402 (475)
T cd03813 323 PDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTGFQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDV 402 (475)
T ss_pred CCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcCCccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCC
Confidence 9999999999843 36778888888875443 444888999999999999999999999999999999999999999
Q ss_pred CC-cccccc------CCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH----hcCCHHHHHHHHHHHHH
Q 008544 378 PS-NDFFKQ------FPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT----HQLSWESATERFLQVAE 435 (562)
Q Consensus 378 ~~-~e~v~~------~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw~~~~~~~~~~y~ 435 (562)
++ .|++.+ +.+|++++ |+++++++|.++++|++. +|+++++ +.|+|+.+++++.++|+
T Consensus 403 g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 403 GSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred CChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 98 899888 56898874 999999999999998875 7887776 78999999999999985
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-30 Score=267.35 Aligned_cols=328 Identities=14% Similarity=0.116 Sum_probs=223.5
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||+++++.+ ..||.+..+..+++.|.+.| |+|+++++... +.. + .. . +.. .....
T Consensus 1 kIl~~~~~~--~~GG~~~~~~~l~~~L~~~~-~~v~~i~~~~~--~~~--~---------~~--~-~~~---~~~~~--- 55 (358)
T cd03812 1 KILHIVGTM--NRGGIETFIMNYYRNLDRSK-IQFDFLVTSKE--EGD--Y---------DD--E-IEK---LGGKI--- 55 (358)
T ss_pred CEEEEeCCC--CCccHHHHHHHHHHhcCccc-eEEEEEEeCCC--Ccc--h---------HH--H-HHH---cCCeE---
Confidence 689999876 57888899999999999887 99999987221 000 0 00 0 000 00000
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-C-EEEEEcCCcHHHHhhhhchH
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-F-VVGIVHTNYLEYVKREKNDR 208 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~-vi~~~h~~~~~~~~~~~~~~ 208 (562)
+.+..... .....+..+.+.+++.+||+||++.+... ++ ...+.+... + .+...|..+..... ...
T Consensus 56 ~~~~~~~~------~~~~~~~~~~~~~~~~~~Dvv~~~~~~~~-~~--~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~ 123 (358)
T cd03812 56 YYIPARKK------NPLKYFKKLYKLIKKNKYDIVHVHGSSAS-GF--ILLAAKKAGVKVRIAHSHNTSDSHDK---KKK 123 (358)
T ss_pred EEecCCCc------cHHHHHHHHHHHHhcCCCCEEEEeCcchh-HH--HHHHHhhCCCCeEEEEeccccccccc---cch
Confidence 00000000 01111334666778899999999988744 22 233444333 3 45566654322111 100
Q ss_pred HHHHHHHHHHHHHHHHhccEEEEcChhhhccC-----CCcc-ccccccCCCCcCcchh-hhHHhhcCCCCCccEEEEEee
Q 008544 209 LQAFLLEFVNSWLARVHCHKVIRLSAATQEYP-----NSIV-CNVHGVNPKFLEIGEK-KMEQQQNGNKAFTKGAYYIGR 281 (562)
Q Consensus 209 ~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~-----~~~~-~~v~GVd~~~~~~~~~-~~~~~~~~~~~~~~~il~vGr 281 (562)
. .....+.....+ .+|.++++|+..++.. ...+ ...+|+|.+.+.+... .......+..++.+.++|+|+
T Consensus 124 ~--~~~~~~~~~~~~-~~~~~i~~s~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGr 200 (358)
T cd03812 124 I--LKYKVLRKLINR-LATDYLACSEEAGKWLFGKVKNKKFKVIPNGIDLEKFIFNEEIRKKRRELGILEDKFVIGHVGR 200 (358)
T ss_pred h--hHHHHHHHHHHh-cCCEEEEcCHHHHHHHHhCCCcccEEEEeccCcHHHcCCCchhhhHHHHcCCCCCCEEEEEEec
Confidence 0 011222333333 3799999998877642 2223 3346898866544322 111333455566889999999
Q ss_pred ccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCCCChHHHHhhcCEEEEccCCCCCc
Q 008544 282 MVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGRDHADPIFHDYKVFLNPSTTDVVC 359 (562)
Q Consensus 282 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~~~~~~l~~~adv~v~pS~~E~~~ 359 (562)
+.++||++.+++++..+.++.|+++++++|+|+..+.+++.++++++. +.+.+..+++.++|+.||++|+||..|++|
T Consensus 201 ~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~~E~~~ 280 (358)
T cd03812 201 FSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGVRNDVPELLQAMDVFLFPSLYEGLP 280 (358)
T ss_pred cccccChHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecccCCHHHHHHhcCEEEecccccCCC
Confidence 999999999999999999889999999999999988999988888765 445666788889999999999999999999
Q ss_pred HHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC-CHHHHHHHHHHHHhCCCC--CccHHHH
Q 008544 360 TATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD-GRNGFVEATLKALAEEPA--QPTDAQT 418 (562)
Q Consensus 360 ~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~-d~~~la~~i~~ll~~~~~--~l~~~ar 418 (562)
++++||||||+|||+|+.++ .+++.++.+++..+ ++++++++|.++++++.. .+...+.
T Consensus 281 ~~~lEAma~G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~ 343 (358)
T cd03812 281 LVLIEAQASGLPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKK 343 (358)
T ss_pred HHHHHHHHhCCCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhh
Confidence 99999999999999999998 88888855444444 679999999999999997 4554444
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=271.48 Aligned_cols=356 Identities=15% Similarity=0.100 Sum_probs=232.3
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccc-cCCCceeCCchhhHHHHHHHhhhccCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQV-YPGNITFASPKEQEAYVRWWLEDRTGFTS 129 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~-~p~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (562)
++++.+....|..||++..+..++++|.+.| |+|++++........... ..+++.+.. ...
T Consensus 8 ~~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g-~~V~v~~~~~~~~~~~~~~~~~~~~~~~---------------~~~-- 69 (398)
T cd03800 8 HGSPLAQPGGADTGGQNVYVLELARALARLG-HEVDIFTRRIDDALPPIVELAPGVRVVR---------------VPA-- 69 (398)
T ss_pred cccccccCCCCCCCceeehHHHHHHHHhccC-ceEEEEEecCCcccCCccccccceEEEe---------------ccc--
Confidence 4445555555778999999999999999998 999999873321110000 001111110 000
Q ss_pred Ccccccccccchhccchh-hhHHhHHhhcCcC--CCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhh
Q 008544 130 TFDTRFYPGKFAADKKSI-LAVGDITEIIPDE--EADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREK 205 (562)
Q Consensus 130 ~~~i~~y~~r~~~~~~~~-~~~~~l~~~i~~~--~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~ 205 (562)
......+.+. ..... .....+.+.+++. +||+||++..... +. +..+++..+ |.|.++|+..........
T Consensus 70 -~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~-~~--~~~~~~~~~~~~i~~~h~~~~~~~~~~~ 143 (398)
T cd03800 70 -GPAEYLPKEE--LWPYLDEFADDLLRFLRREGGRPDLIHAHYWDSG-LV--ALLLARRLGIPLVHTFHSLGAVKRRHLG 143 (398)
T ss_pred -ccccCCChhh--cchhHHHHHHHHHHHHHhcCCCccEEEEecCccc-hH--HHHHHhhcCCceEEEeecccccCCcccc
Confidence 0000000000 00000 0122344555555 8999999975433 22 233444445 888899965332111100
Q ss_pred chHH-HHHHHHHHHHHHHHHhccEEEEcChhhhccC-------CC-ccccccccCCCCcCcchhhhH-HhhcCCCCCccE
Q 008544 206 NDRL-QAFLLEFVNSWLARVHCHKVIRLSAATQEYP-------NS-IVCNVHGVNPKFLEIGEKKME-QQQNGNKAFTKG 275 (562)
Q Consensus 206 ~~~~-~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~-------~~-~~~~v~GVd~~~~~~~~~~~~-~~~~~~~~~~~~ 275 (562)
.... .........+.+.+ .+|.++++|+..++.. .. .....+|+|...+.+...... +.....+.+.++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~-~ad~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (398)
T cd03800 144 AADTYEPARRIEAEERLLR-AADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPR 222 (398)
T ss_pred cccccchhhhhhHHHHHHh-hCCEEEEcCHHHHHHHHHHccccccccEEECCCCCccceecccchhhHHHhhccCCCCcE
Confidence 0000 00111122233333 3899999998765521 11 223346888876654433222 223344556789
Q ss_pred EEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCH------HHHHHHHHhcCCe--eEEeCCCC--ChHHHHhh
Q 008544 276 AYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDF------DQIQRAAKKLKLV--VRVYPGRD--HADPIFHD 345 (562)
Q Consensus 276 il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~------~~l~~~~~~l~l~--~~~~~~~~--~~~~l~~~ 345 (562)
++|+||+.+.||++.+++++..+.++.++++|+++|++... ..++..++.+++. +.+++..+ ++.++++.
T Consensus 223 i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 302 (398)
T cd03800 223 ILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRA 302 (398)
T ss_pred EEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHh
Confidence 99999999999999999999999888889999999987642 3456677777654 44455533 45589999
Q ss_pred cCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH--
Q 008544 346 YKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT-- 418 (562)
Q Consensus 346 adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar-- 418 (562)
+|++++||..|++|++++|||+||+|||+++.++ .|++.++.+|++++ |+++++++|.+++++++. .|+++++
T Consensus 303 adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 382 (398)
T cd03800 303 ADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRR 382 (398)
T ss_pred CCEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987 89999999999985 899999999999998765 6777666
Q ss_pred --hcCCHHHHHHHHH
Q 008544 419 --HQLSWESATERFL 431 (562)
Q Consensus 419 --~~~sw~~~~~~~~ 431 (562)
++|||+.++++++
T Consensus 383 ~~~~~s~~~~~~~~~ 397 (398)
T cd03800 383 ARARYTWERVAARLL 397 (398)
T ss_pred HHHhCCHHHHHHHHh
Confidence 7899999999886
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=281.11 Aligned_cols=272 Identities=11% Similarity=0.095 Sum_probs=188.3
Q ss_pred CCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhc--hHHHH--HHHHHHH-HHHHHHhccEEEEcC
Q 008544 160 EEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKN--DRLQA--FLLEFVN-SWLARVHCHKVIRLS 233 (562)
Q Consensus 160 ~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~--~~~~~--~~~~~~~-~~~~~~~ad~vi~~S 233 (562)
.+||+||+|..... +. +..++++++ |.+.+.|+.-.......+. ..... .+...+. .......||.||+.|
T Consensus 384 ~~pDlIHahy~d~g-lv--a~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT 460 (784)
T TIGR02470 384 GKPDLIIGNYSDGN-LV--ASLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITST 460 (784)
T ss_pred CCCCEEEECCCchH-HH--HHHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECc
Confidence 47999999986654 33 455777777 8899999662211100000 00000 1111111 122222489999999
Q ss_pred hhhhc--------c--------------------CCCccccc-cccCCCCcCcchhhhH-------------------Hh
Q 008544 234 AATQE--------Y--------------------PNSIVCNV-HGVNPKFLEIGEKKME-------------------QQ 265 (562)
Q Consensus 234 ~~~~~--------~--------------------~~~~~~~v-~GVd~~~~~~~~~~~~-------------------~~ 265 (562)
..... + +..++..+ +|+|...|.|...... ..
T Consensus 461 ~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~ 540 (784)
T TIGR02470 461 YQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDE 540 (784)
T ss_pred HHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHH
Confidence 53311 1 11222223 5999876654332211 12
Q ss_pred hcCC--CCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCC------------HHHHHHHHHhcCCeeE
Q 008544 266 QNGN--KAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGED------------FDQIQRAAKKLKLVVR 331 (562)
Q Consensus 266 ~~~~--~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~------------~~~l~~~~~~l~l~~~ 331 (562)
..+. ++++++|+++||+.+.||++.+++|+.++....++++|+|+|++++ .+++.++++++++..+
T Consensus 541 ~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~ 620 (784)
T TIGR02470 541 HYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQ 620 (784)
T ss_pred HhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCe
Confidence 2333 4567899999999999999999999988765556799999998642 1456677888887644
Q ss_pred --EeCCC---CChHHHHh----hcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHH
Q 008544 332 --VYPGR---DHADPIFH----DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFV 399 (562)
Q Consensus 332 --~~~~~---~~~~~l~~----~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la 399 (562)
+.+.. .+..++|+ .+|+||+||++|+||++++||||||+|||+|+.|| .|++.++.+|++++ |+++++
T Consensus 621 V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA 700 (784)
T TIGR02470 621 IRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAA 700 (784)
T ss_pred EEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHH
Confidence 44433 34446665 24799999999999999999999999999999999 99999999999985 999999
Q ss_pred HHHHHHH----hCCCC--CccHHHH----hcCCHHHHHHHHHHHH
Q 008544 400 EATLKAL----AEEPA--QPTDAQT----HQLSWESATERFLQVA 434 (562)
Q Consensus 400 ~~i~~ll----~~~~~--~l~~~ar----~~~sw~~~~~~~~~~y 434 (562)
++|.+++ +|+.. +|+++++ ++|||+..+++++++.
T Consensus 701 ~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 701 EKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999886 45544 7887776 7899999999999876
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-30 Score=263.48 Aligned_cols=338 Identities=14% Similarity=0.086 Sum_probs=233.6
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
+|+++++.+ ..||....+..++++|.++| |+|++++........ ..+.. .. . .....
T Consensus 1 ~il~~~~~~--~~gG~~~~~~~l~~~L~~~g-~~v~v~~~~~~~~~~--~~~~~------~~-------~--~~~~~--- 57 (360)
T cd04951 1 KILYVITGL--GLGGAEKQVVDLADQFVAKG-HQVAIISLTGESEVK--PPIDA------TI-------I--LNLNM--- 57 (360)
T ss_pred CeEEEecCC--CCCCHHHHHHHHHHhcccCC-ceEEEEEEeCCCCcc--chhhc------cc-------e--EEecc---
Confidence 488888765 36888888999999999998 999999862211000 00000 00 0 00000
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchHHH
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQ 210 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~~ 210 (562)
.... .........+.+++++.+||+||++.+....+. ....+..+..+++.+.|+.... +
T Consensus 58 ---~~~~------~~~~~~~~~~~~~~~~~~pdiv~~~~~~~~~~~-~l~~~~~~~~~~v~~~h~~~~~-------~--- 117 (360)
T cd04951 58 ---SKNP------LSFLLALWKLRKILRQFKPDVVHAHMFHANIFA-RLLRLFLPSPPLICTAHSKNEG-------G--- 117 (360)
T ss_pred ---cccc------hhhHHHHHHHHHHHHhcCCCEEEEcccchHHHH-HHHHhhCCCCcEEEEeeccCch-------h---
Confidence 0000 001112334667788899999999987543221 1111112222788888854321 1
Q ss_pred HHHHHHHHHHHHHHhccEEEEcChhhhcc-------CCCcc-ccccccCCCCcCcchh--hhHHhhcCCCCCccEEEEEe
Q 008544 211 AFLLEFVNSWLARVHCHKVIRLSAATQEY-------PNSIV-CNVHGVNPKFLEIGEK--KMEQQQNGNKAFTKGAYYIG 280 (562)
Q Consensus 211 ~~~~~~~~~~~~~~~ad~vi~~S~~~~~~-------~~~~~-~~v~GVd~~~~~~~~~--~~~~~~~~~~~~~~~il~vG 280 (562)
.......+...+ +++.++++|+..++. +.+.+ ...+|+|...+.+... ...+...+.+++.++++|+|
T Consensus 118 -~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 195 (360)
T cd04951 118 -RLRMLAYRLTDF-LSDLTTNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNALGVKNDTFVILAVG 195 (360)
T ss_pred -HHHHHHHHHHhh-ccCceEEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHHHcCcCCCCEEEEEEe
Confidence 111122222222 368888888776653 22223 3336888776654322 22233455666678999999
Q ss_pred eccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCCCChHHHHhhcCEEEEccCCCCC
Q 008544 281 RMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGRDHADPIFHDYKVFLNPSTTDVV 358 (562)
Q Consensus 281 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~~~~~~l~~~adv~v~pS~~E~~ 358 (562)
++.+.||++.+++++.++.++.|+++|+|+|+|++.+.+++.+++++.. +.+.+..+++.++|+.||++++||..|++
T Consensus 196 ~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~s~~e~~ 275 (360)
T cd04951 196 RLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRDDIAAYYNAADLFVLSSAWEGF 275 (360)
T ss_pred eCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEecccccHHHHHHhhceEEecccccCC
Confidence 9999999999999999998888999999999999988999988887754 55677788888999999999999999999
Q ss_pred cHHHHHHHHcCCcEEeeCCCC-ccccccCCceEee--CCHHHHHHHHHHHHhCCCC---CccHH---HHhcCCHHHHHHH
Q 008544 359 CTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTY--DGRNGFVEATLKALAEEPA---QPTDA---QTHQLSWESATER 429 (562)
Q Consensus 359 ~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~--~d~~~la~~i~~ll~~~~~---~l~~~---ar~~~sw~~~~~~ 429 (562)
|++++|||++|+|||+++.++ .|++.+ +|+.+ +|+++++++|.+++++++. .++++ ..++|+|+.++++
T Consensus 276 ~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 353 (360)
T cd04951 276 GLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVKKFSINSIVQQ 353 (360)
T ss_pred ChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 999999999999999999988 888877 55554 6999999999999965543 34443 2289999999999
Q ss_pred HHHHHH
Q 008544 430 FLQVAE 435 (562)
Q Consensus 430 ~~~~y~ 435 (562)
+.++|+
T Consensus 354 ~~~~y~ 359 (360)
T cd04951 354 WLTLYT 359 (360)
T ss_pred HHHHhh
Confidence 999996
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=261.56 Aligned_cols=342 Identities=15% Similarity=0.078 Sum_probs=240.1
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||++++..+.+ ||++.....+++.|.+.| |+|.+++..... . +. ..... ..+..
T Consensus 1 ~i~~i~~~~~~--gG~~~~~~~l~~~l~~~~-~~v~~~~~~~~~--~---~~------------~~~~~---~~i~v--- 54 (365)
T cd03807 1 KVLHVITGLDV--GGAERMLVRLLKGLDRDR-FEHVVISLTDRG--E---LG------------EELEE---AGVPV--- 54 (365)
T ss_pred CeEEEEeeccC--ccHHHHHHHHHHHhhhcc-ceEEEEecCcch--h---hh------------HHHHh---cCCeE---
Confidence 68999988866 888888999999999988 999999762100 0 00 00000 00000
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHh--hcCCEEEEEcCCcHHHHhhhhchH
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKA--KFRFVVGIVHTNYLEYVKREKNDR 208 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~--~~~~vi~~~h~~~~~~~~~~~~~~ 208 (562)
..+..... ......+..+.+++++.+||+||++......+. ..... ...+++.+.|....... .
T Consensus 55 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~div~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~------~ 120 (365)
T cd03807 55 YCLGKRPG-----RPDPGALLRLYKLIRRLRPDVVHTWMYHADLYG---GLAARLAGVPPVIWGIRHSDLDLG------K 120 (365)
T ss_pred EEEecccc-----cccHHHHHHHHHHHHhhCCCEEEeccccccHHH---HHHHHhcCCCcEEEEecCCccccc------c
Confidence 00110000 111122445777888899999999876543221 11122 22378888886644321 0
Q ss_pred HHHHHHHHHHHHHHHHhccEEEEcChhhhccCC------Ccc-ccccccCCCCcCcchhh--hHHhhcCCCCCccEEEEE
Q 008544 209 LQAFLLEFVNSWLARVHCHKVIRLSAATQEYPN------SIV-CNVHGVNPKFLEIGEKK--MEQQQNGNKAFTKGAYYI 279 (562)
Q Consensus 209 ~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~------~~~-~~v~GVd~~~~~~~~~~--~~~~~~~~~~~~~~il~v 279 (562)
........+...+.+. +|.++++|+..++... +.+ ...+|+|...+.+.... ..+.+.+.+++.+.++|+
T Consensus 121 ~~~~~~~~~~~~~~~~-~~~~i~~s~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 199 (365)
T cd03807 121 KSTRLVARLRRLLSSF-IPLIVANSAAAAEYHQAIGYPPKKIVVIPNGVDTERFSPDLDARARLREELGLPEDTFLIGIV 199 (365)
T ss_pred hhHhHHHHHHHHhccc-cCeEEeccHHHHHHHHHcCCChhheeEeCCCcCHHhcCCcccchHHHHHhcCCCCCCeEEEEe
Confidence 1112333334444443 7888999988777322 222 23358887665543322 122345666667889999
Q ss_pred eeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHH-hcCCe--eEEeCCCCChHHHHhhcCEEEEccCCC
Q 008544 280 GRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAK-KLKLV--VRVYPGRDHADPIFHDYKVFLNPSTTD 356 (562)
Q Consensus 280 Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~-~l~l~--~~~~~~~~~~~~l~~~adv~v~pS~~E 356 (562)
|++.+.||++.+++++..+.++.++++|+++|.++.....+.... +.++. +.+++..++..++|+.+|++++||..|
T Consensus 200 G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~~e 279 (365)
T cd03807 200 ARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGERSDVPALLNALDVFVLSSLSE 279 (365)
T ss_pred cccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEccccccHHHHHHhCCEEEeCCccc
Confidence 999999999999999999988889999999999988777777666 66654 445676888889999999999999999
Q ss_pred CCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEee--CCHHHHHHHHHHHHhCCCC--CccHHHH----hcCCHHHHH
Q 008544 357 VVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTY--DGRNGFVEATLKALAEEPA--QPTDAQT----HQLSWESAT 427 (562)
Q Consensus 357 ~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~--~d~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw~~~~ 427 (562)
++|++++|||+||+|||+++.++ .|++.+ +|+++ +|+++++++|.+++++++. .++++++ ++|+|+..+
T Consensus 280 ~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 357 (365)
T cd03807 280 GFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMV 357 (365)
T ss_pred cCCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999999999998 888877 77776 4999999999999999865 6666665 789999999
Q ss_pred HHHHHHHH
Q 008544 428 ERFLQVAE 435 (562)
Q Consensus 428 ~~~~~~y~ 435 (562)
+++.++|+
T Consensus 358 ~~~~~~y~ 365 (365)
T cd03807 358 EAYEELYR 365 (365)
T ss_pred HHHHHHhC
Confidence 99999985
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-30 Score=264.83 Aligned_cols=331 Identities=14% Similarity=0.103 Sum_probs=224.1
Q ss_pred CeEEEEecccCCCcccccccHHHHHHHHHHcC-CCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCC
Q 008544 50 QHIAIFTTASLPWLTGTAVNPLFRAAYLAKDG-ERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFT 128 (562)
Q Consensus 50 ~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~G-g~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (562)
|||+++++.+ |..||++..+..++++|.++| ||+|+++++.... . . .+.... ......
T Consensus 1 mkI~~~~~~~-~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~--~-------------~---~~~~~~--~~~~~~ 59 (359)
T PRK09922 1 MKIAFIGEAV-SGFGGMETVISNVINTFEESKINCEMFFFCRNDKM--D-------------K---AWLKEI--KYAQSF 59 (359)
T ss_pred CeeEEecccc-cCCCchhHHHHHHHHHhhhcCcceeEEEEecCCCC--C-------------h---HHHHhc--chhccc
Confidence 6999998865 556998999999999999993 3999999872210 0 0 000000 000000
Q ss_pred CCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC---CEEEEEcCCcHHHHhhhh
Q 008544 129 STFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR---FVVGIVHTNYLEYVKREK 205 (562)
Q Consensus 129 ~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~---~vi~~~h~~~~~~~~~~~ 205 (562)
+...+.... .......+.+++++.+||+||++++... ++ +....+..+ +++.+.|.......
T Consensus 60 ~~~~~~~~~--------~~~~~~~l~~~l~~~~~Dii~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~h~~~~~~~---- 124 (359)
T PRK09922 60 SNIKLSFLR--------RAKHVYNFSKWLKETQPDIVICIDVISC-LY--ANKARKKSGKQFKIFSWPHFSLDHKK---- 124 (359)
T ss_pred ccchhhhhc--------ccHHHHHHHHHHHhcCCCEEEEcCHHHH-HH--HHHHHHHhCCCCeEEEEecCcccccc----
Confidence 111111110 0111345778889999999999987554 22 222222222 35555664322110
Q ss_pred chHHHHHHHHHHHHHHHHHhccEEEEcChhhhccCC------Cccc-cccccCCCCcCcchhhhHHhhcCCCCCccEEEE
Q 008544 206 NDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYPN------SIVC-NVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYY 278 (562)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~------~~~~-~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~ 278 (562)
.. .. ..+ ..+|.++++|+..++... +.+. ..||+|.+.+.... ....+.+.++|
T Consensus 125 -------~~-~~-~~~--~~~d~~i~~S~~~~~~~~~~~~~~~ki~vi~N~id~~~~~~~~--------~~~~~~~~i~~ 185 (359)
T PRK09922 125 -------HA-EC-KKI--TCADYHLAISSGIKEQMMARGISAQRISVIYNPVEIKTIIIPP--------PERDKPAVFLY 185 (359)
T ss_pred -------hh-hh-hhh--hcCCEEEEcCHHHHHHHHHcCCCHHHEEEEcCCCCHHHccCCC--------cccCCCcEEEE
Confidence 00 00 011 237999999988877422 1222 23577643221100 01123678999
Q ss_pred Eeeccc--cCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCCCCh----HHHHhhcCEEE
Q 008544 279 IGRMVW--SKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGRDHA----DPIFHDYKVFL 350 (562)
Q Consensus 279 vGr~~~--~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~~~~----~~l~~~adv~v 350 (562)
+||+.+ .||++.+++++.++. ++++|+++|+|++.+.+++.++++++. +.+.|..++. .++|+.+|++|
T Consensus 186 ~Grl~~~~~k~~~~l~~a~~~~~---~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v 262 (359)
T PRK09922 186 VGRLKFEGQKNVKELFDGLSQTT---GEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALL 262 (359)
T ss_pred EEEEecccCcCHHHHHHHHHhhC---CCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEE
Confidence 999964 599999999998764 379999999999999999999988875 4455554443 36677899999
Q ss_pred EccCCCCCcHHHHHHHHcCCcEEeeC-CCC-ccccccCCceEee--CCHHHHHHHHHHHHhCCCCCccHH---HHhcCCH
Q 008544 351 NPSTTDVVCTATAEALAMGKIVVCAN-HPS-NDFFKQFPNCRTY--DGRNGFVEATLKALAEEPAQPTDA---QTHQLSW 423 (562)
Q Consensus 351 ~pS~~E~~~~~~lEAma~G~PVI~t~-~~~-~e~v~~~~~g~~~--~d~~~la~~i~~ll~~~~~~l~~~---ar~~~sw 423 (562)
+||..|+||++++||||||+|||+++ .++ .|++.++.+|+++ +|+++++++|.+++++++.+.... ..++|+-
T Consensus 263 ~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 342 (359)
T PRK09922 263 LTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVKYQHDAIPNSIERFYE 342 (359)
T ss_pred ECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcccCCHHHHHHHHHHhhH
Confidence 99999999999999999999999999 677 8999999999997 499999999999999998532222 2278899
Q ss_pred HHHHHHHHHHHHhcC
Q 008544 424 ESATERFLQVAELVG 438 (562)
Q Consensus 424 ~~~~~~~~~~y~~~~ 438 (562)
+..++++.+.|+..+
T Consensus 343 ~~~~~~~~~~~~~~~ 357 (359)
T PRK09922 343 VLYFKNLNNALFSKL 357 (359)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998654
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=262.93 Aligned_cols=342 Identities=14% Similarity=0.109 Sum_probs=220.1
Q ss_pred eEEEEec-ccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCC
Q 008544 51 HIAIFTT-ASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTS 129 (562)
Q Consensus 51 rI~ivt~-~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (562)
||+|++. .++|..||++.....++++|.++| |+|+|+++..........+ +++++... +
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~g-~~v~v~~~~~~~~~~~~~~-~~i~~~~~------------------~ 60 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVARG-HEVTVYCRSPYPKQKETEY-NGVRLIHI------------------P 60 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhcC-CCEEEEEccCCCCCccccc-CCceEEEc------------------C
Confidence 6899965 466778999999999999999998 9999998832111100000 11111100 0
Q ss_pred CcccccccccchhccchhhhHHhHHhhc-CcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhch
Q 008544 130 TFDTRFYPGKFAADKKSILAVGDITEII-PDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKND 207 (562)
Q Consensus 130 ~~~i~~y~~r~~~~~~~~~~~~~l~~~i-~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~ 207 (562)
...... . ......+..+...+ .+.++|++|...+....+ ..+.++.+ |++.++|+.... . ....
T Consensus 61 ~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~v~~~h~~~~~--~-~~~~ 126 (363)
T cd04955 61 APEIGG----L---GTIIYDILAILHALFVKRDIDHVHALGPAIAPF----LPLLRLKGKKVVVNMDGLEWK--R-AKWG 126 (363)
T ss_pred CCCccc----h---hhhHHHHHHHHHHHhccCCeEEEEecCccHHHH----HHHHHhcCCCEEEEccCccee--e-cccc
Confidence 000000 0 00000111122222 345677777666654211 12333334 888888864211 1 1111
Q ss_pred HHHHHHHHHHHHHHHHHhccEEEEcChhhhccC-----CCccccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeec
Q 008544 208 RLQAFLLEFVNSWLARVHCHKVIRLSAATQEYP-----NSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRM 282 (562)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~-----~~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~ 282 (562)
.....+.+...++..+. +|.++++|+..++.. .......+|+|...+.+ ........+..+ ...++|+|++
T Consensus 127 ~~~~~~~~~~~~~~~~~-ad~ii~~s~~~~~~~~~~~~~~~~~i~ngv~~~~~~~--~~~~~~~~~~~~-~~~i~~~G~~ 202 (363)
T cd04955 127 RPAKRYLKFGEKLAVKF-ADRLIADSPGIKEYLKEKYGRDSTYIPYGADHVVSSE--EDEILKKYGLEP-GRYYLLVGRI 202 (363)
T ss_pred cchhHHHHHHHHHHHhh-ccEEEeCCHHHHHHHHHhcCCCCeeeCCCcChhhcch--hhhhHHhcCCCC-CcEEEEEecc
Confidence 11122333333444443 899999998887743 22233346888766543 111222333333 4568899999
Q ss_pred cccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHH-hcCC--eeEEeCCCCC--hHHHHhhcCEEEEccCC-C
Q 008544 283 VWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAK-KLKL--VVRVYPGRDH--ADPIFHDYKVFLNPSTT-D 356 (562)
Q Consensus 283 ~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~-~l~l--~~~~~~~~~~--~~~l~~~adv~v~pS~~-E 356 (562)
.+.||++.+++++.++.. +++|+++|+|+....+.+.++ .++. ++++.+...+ ..+++..+|++++||.. |
T Consensus 203 ~~~Kg~~~li~a~~~l~~---~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e 279 (363)
T cd04955 203 VPENNIDDLIEAFSKSNS---GKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVG 279 (363)
T ss_pred cccCCHHHHHHHHHhhcc---CceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeCCccCC
Confidence 999999999999988753 799999999866555555444 3443 3555665444 34899999999999988 9
Q ss_pred CCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeCCHHHHHHHHHHHHhCCCC--CccHHHH----hcCCHHHHHHH
Q 008544 357 VVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYDGRNGFVEATLKALAEEPA--QPTDAQT----HQLSWESATER 429 (562)
Q Consensus 357 ~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw~~~~~~ 429 (562)
+||++++|||+||+|||+|+.++ .|++.+ +|+++++.+.++++|.+++++++. .++++++ ++|||+.++++
T Consensus 280 ~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~ 357 (363)
T cd04955 280 GTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDDLASLLEELEADPEEVSAMAKAARERIREKYTWEKIADQ 357 (363)
T ss_pred CCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 99999999999999999999997 788766 677766444499999999999865 6777766 57999999999
Q ss_pred HHHHHH
Q 008544 430 FLQVAE 435 (562)
Q Consensus 430 ~~~~y~ 435 (562)
++++|+
T Consensus 358 ~~~~y~ 363 (363)
T cd04955 358 YEELYK 363 (363)
T ss_pred HHHHhC
Confidence 999985
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-30 Score=266.05 Aligned_cols=339 Identities=14% Similarity=0.053 Sum_probs=227.6
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||+++++.++|. ++++...+++.|. | |+|++++...........-...+........ .....+
T Consensus 1 ~~~~~~~~~~~~---~e~~~~~~~~~l~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------- 63 (367)
T cd05844 1 RVLIFRPLLLAP---SETFVRNQAEALR--R-FRPVYVGGRRLGPAPLGALAVRLADLAGGKA-GLRLGA---------- 63 (367)
T ss_pred CEEEEeCCCCCC---chHHHHHHHHhcc--c-CCcEEEEeeccCCCCCcccceeeeecccchh-HHHHHH----------
Confidence 588999988774 5888999999995 4 8888887622110000000000000000000 000000
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHH
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRL 209 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~ 209 (562)
..........+..++++.+||+||++..... +. +..++++.+ |++.++|+.............
T Consensus 64 ------------~~~~~~~~~~~~~~~~~~~~dvvh~~~~~~~-~~--~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~- 127 (367)
T cd05844 64 ------------LRLLTGSAPQLRRLLRRHRPDLVHAHFGFDG-VY--ALPLARRLGVPLVVTFHGFDATTSLALLLRS- 127 (367)
T ss_pred ------------HHhccccccHHHHHHHhhCCCEEEeccCchH-HH--HHHHHHHcCCCEEEEEeCccccccchhhccc-
Confidence 0000000112444677889999999876543 22 223445444 899999964221111101000
Q ss_pred HHHHHHHHHHHHHHHhccEEEEcChhhhccCC------Ccc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeec
Q 008544 210 QAFLLEFVNSWLARVHCHKVIRLSAATQEYPN------SIV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRM 282 (562)
Q Consensus 210 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~------~~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~ 282 (562)
.........+.+.+. +|.++++|+..++... ..+ +..+|+|...+.+.. ...+.+.++|+|++
T Consensus 128 ~~~~~~~~~~~~~~~-~d~ii~~s~~~~~~~~~~~~~~~~i~vi~~g~d~~~~~~~~---------~~~~~~~i~~~G~~ 197 (367)
T cd05844 128 RWALYARRRRRLARR-AALFIAVSQFIRDRLLALGFPPEKVHVHPIGVDTAKFTPAT---------PARRPPRILFVGRF 197 (367)
T ss_pred chhHHHHHHHHHHHh-cCEEEECCHHHHHHHHHcCCCHHHeEEecCCCCHHhcCCCC---------CCCCCcEEEEEEee
Confidence 011222233333333 7999999998887422 122 233588776655321 11235789999999
Q ss_pred cccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCC--CChHHHHhhcCEEEEccC----
Q 008544 283 VWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGR--DHADPIFHDYKVFLNPST---- 354 (562)
Q Consensus 283 ~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~--~~~~~l~~~adv~v~pS~---- 354 (562)
.+.||++.+++++..+.++.++++|+++|.|+..+++++.++++++. +.+.+.. +++.++|+.+|++|+||.
T Consensus 198 ~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~ 277 (367)
T cd05844 198 VEKKGPLLLLEAFARLARRVPEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPS 277 (367)
T ss_pred ccccChHHHHHHHHHHHHhCCCeEEEEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCC
Confidence 99999999999999998888999999999998888899999887654 4455554 346699999999999996
Q ss_pred --CCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH----hcCCH
Q 008544 355 --TDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT----HQLSW 423 (562)
Q Consensus 355 --~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw 423 (562)
.|++|++++|||+||+|||+++.++ .|++.++.+|++++ |+++++++|.+++++++. +|+++++ ++|+|
T Consensus 278 ~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~ 357 (367)
T cd05844 278 GDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDL 357 (367)
T ss_pred CCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCH
Confidence 5999999999999999999999998 89999999999984 999999999999998875 6777665 78999
Q ss_pred HHHHHHHHH
Q 008544 424 ESATERFLQ 432 (562)
Q Consensus 424 ~~~~~~~~~ 432 (562)
+..++++.+
T Consensus 358 ~~~~~~l~~ 366 (367)
T cd05844 358 RRQTAKLEA 366 (367)
T ss_pred HHHHHHHhc
Confidence 999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=262.72 Aligned_cols=358 Identities=16% Similarity=0.147 Sum_probs=236.5
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCcccccccc------CCCceeCCchhhHHHHHHHhhhc
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVY------PGNITFASPKEQEAYVRWWLEDR 124 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~------p~~i~~~~~~~~~~~~~~~~~~~ 124 (562)
||+++++.+.|..+|.+..+..++++|.++| |+|+++++........... .+++.+..
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 64 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRG-HEVTVITGSPNYPSGKIYKGYKREEVDGVRVHR--------------- 64 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCC-ceEEEEecCCCcccccccccceEEecCCeEEEE---------------
Confidence 6999999998888999999999999999998 9999998733111111000 00100000
Q ss_pred cCCCCCcccccccccchhccchhhhHHhHHhhc-CcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHh
Q 008544 125 TGFTSTFDTRFYPGKFAADKKSILAVGDITEII-PDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVK 202 (562)
Q Consensus 125 ~~~~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i-~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~ 202 (562)
........... ..+..... .+......... +..+||+||++.+.....+. +....++.+ |++.++|+.++....
T Consensus 65 ~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~~h~~~~~~~~ 140 (394)
T cd03794 65 VPLPPYKKNGL-LKRLLNYL--SFALSALLALLKRRRRPDVIIATSPPLLIALA-ALLLARLKGAPFVLEVRDLWPESAV 140 (394)
T ss_pred EecCCCCccch-HHHHHhhh--HHHHHHHHHHHhcccCCCEEEEcCChHHHHHH-HHHHHHhcCCCEEEEehhhcchhHH
Confidence 00000000000 00000000 00111122222 47889999999854442221 222333333 899999977654432
Q ss_pred hhh---chHHHHHHHHHHHHHHHHHhccEEEEcChhhhccCC------Ccc-ccccccCCCCcCcchhhhHHhhcCCCCC
Q 008544 203 REK---NDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYPN------SIV-CNVHGVNPKFLEIGEKKMEQQQNGNKAF 272 (562)
Q Consensus 203 ~~~---~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~------~~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~ 272 (562)
... .......+...+.+...+. +|.++++|+..++... ..+ ...+|++...+.+..............+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (394)
T cd03794 141 ALGLLKNGSLLYRLLRKLERLIYRR-ADAIVVISPGMREYLVRRGVPPEKISVIPNGVDLELFKPPPADESLRKELGLDD 219 (394)
T ss_pred HccCccccchHHHHHHHHHHHHHhc-CCEEEEECHHHHHHHHhcCCCcCceEEcCCCCCHHHcCCccchhhhhhccCCCC
Confidence 211 1111112333333333333 8999999988877431 222 2335777765554332211222334455
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe-eEEeCCC--CChHHHHhhcCEE
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV-VRVYPGR--DHADPIFHDYKVF 349 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~-~~~~~~~--~~~~~l~~~adv~ 349 (562)
...++|+|++.+.||++.+++++.++.+. ++++|+++|.|+..+.+++.+...+.. +.+++.. ++..++|+.+|++
T Consensus 220 ~~~i~~~G~~~~~k~~~~l~~~~~~l~~~-~~~~l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~ 298 (394)
T cd03794 220 KFVVLYAGNIGRAQGLDTLLEAAALLKDR-PDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVG 298 (394)
T ss_pred cEEEEEecCcccccCHHHHHHHHHHHhhc-CCeEEEEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCee
Confidence 78899999999999999999999999877 899999999999888888876655554 5556644 4555999999999
Q ss_pred EEccCCCCC-----cHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH-
Q 008544 350 LNPSTTDVV-----CTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT- 418 (562)
Q Consensus 350 v~pS~~E~~-----~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar- 418 (562)
++||..|++ |++++|||+||+|||+++.++ .+++.++.+|++++ |+++++++|.++++|+.. .|+++++
T Consensus 299 i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 378 (394)
T cd03794 299 LVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERAEMGENGRR 378 (394)
T ss_pred EEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 999987765 889999999999999999998 88888888898874 899999999999988876 7777666
Q ss_pred ---hcCCHHHHHHHH
Q 008544 419 ---HQLSWESATERF 430 (562)
Q Consensus 419 ---~~~sw~~~~~~~ 430 (562)
++|+|+.+++++
T Consensus 379 ~~~~~~s~~~~~~~~ 393 (394)
T cd03794 379 YVEEKFSREKLAERL 393 (394)
T ss_pred HHHHhhcHHHHHHhc
Confidence 589999999876
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=261.84 Aligned_cols=337 Identities=18% Similarity=0.074 Sum_probs=228.7
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||+||++. +|..+|.+.....+++.|.+.| |+|++++..... .. .. .... . ...
T Consensus 1 kI~~v~~~-~~~~gG~~~~~~~l~~~L~~~g-~~v~v~~~~~~~--~~--~~------~~~~--~--------~~~---- 54 (366)
T cd03822 1 RIALVSPY-PPRKCGIATFTTDLVNALSARG-PDVLVVSVAALY--PS--LL------YGGE--Q--------EVV---- 54 (366)
T ss_pred CeEEecCC-CCCCCcHHHHHHHHHHHhhhcC-CeEEEEEeeccc--Cc--cc------CCCc--c--------cce----
Confidence 68999874 5778999999999999999998 999999762210 00 00 0000 0 000
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchh--hhh-hchHHHHhhcC-CEEEEEcCCcHHHHhhhhc
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHL--TWF-HHGKRWKAKFR-FVVGIVHTNYLEYVKREKN 206 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~--~~~-~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~ 206 (562)
.... .........+.+.+++.+||+||++..... ... ..........+ |+|.++|+......
T Consensus 55 ~~~~---------~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~----- 120 (366)
T cd03822 55 RVIV---------LDNPLDYRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEP----- 120 (366)
T ss_pred eeee---------cCCchhHHHHHHHHhhcCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCcccc-----
Confidence 0000 000111233666778889999999873221 011 00011112233 89999997511110
Q ss_pred hHHHHHHHHHHHHHHHHHhccEEEEcC-hhhhccCC----Ccc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEe
Q 008544 207 DRLQAFLLEFVNSWLARVHCHKVIRLS-AATQEYPN----SIV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIG 280 (562)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~ad~vi~~S-~~~~~~~~----~~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vG 280 (562)
. .....+.+.+.+. +|.++++| +..+++.. +.+ ...+|++...+...... .......+.+.++|+|
T Consensus 121 ~----~~~~~~~~~~~~~-~d~ii~~s~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~G 192 (366)
T cd03822 121 R----PGDRALLRLLLRR-ADAVIVMSSELLRALLLRAYPEKIAVIPHGVPDPPAEPPESL---KALGGLDGRPVLLTFG 192 (366)
T ss_pred c----hhhhHHHHHHHhc-CCEEEEeeHHHHHHHHhhcCCCcEEEeCCCCcCcccCCchhh---HhhcCCCCCeEEEEEe
Confidence 0 1112222223333 79999995 55555322 223 33368877665433221 2223344578899999
Q ss_pred eccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHH-----HHHHhcCCe--eEEeCC---CCChHHHHhhcCEEE
Q 008544 281 RMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQ-----RAAKKLKLV--VRVYPG---RDHADPIFHDYKVFL 350 (562)
Q Consensus 281 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~-----~~~~~l~l~--~~~~~~---~~~~~~l~~~adv~v 350 (562)
++.+.||++.+++++..+.++.++++|+++|.+....... ++++++++. +.++++ .++..++|+.+|+++
T Consensus 193 ~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v 272 (366)
T cd03822 193 LLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVV 272 (366)
T ss_pred eccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEE
Confidence 9999999999999999999888999999999976533222 125666654 455666 345669999999999
Q ss_pred EccCCC--CCcHHHHHHHHcCCcEEeeCCCCccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH---hcC
Q 008544 351 NPSTTD--VVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT---HQL 421 (562)
Q Consensus 351 ~pS~~E--~~~~~~lEAma~G~PVI~t~~~~~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar---~~~ 421 (562)
+||..| ++|++++|||+||+|||+++.++.+.+.++.+|++++ |+++++++|.++++++.. +|+++++ ++|
T Consensus 273 ~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 352 (366)
T cd03822 273 LPYRSADQTQSGVLAYAIGFGKPVISTPVGHAEEVLDGGTGLLVPPGDPAALAEAIRRLLADPELAQALRARAREYARAM 352 (366)
T ss_pred ecccccccccchHHHHHHHcCCCEEecCCCChheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHhhC
Confidence 999999 9999999999999999999998877777888899874 899999999999998765 7887776 569
Q ss_pred CHHHHHHHHHHHHH
Q 008544 422 SWESATERFLQVAE 435 (562)
Q Consensus 422 sw~~~~~~~~~~y~ 435 (562)
+|+.+++++.++|+
T Consensus 353 s~~~~~~~~~~~~~ 366 (366)
T cd03822 353 SWERVAERYLRLLA 366 (366)
T ss_pred CHHHHHHHHHHHhC
Confidence 99999999999884
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=261.18 Aligned_cols=331 Identities=17% Similarity=0.116 Sum_probs=225.3
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccC-CCceeCCchhhHHHHHHHhhhccCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYP-GNITFASPKEQEAYVRWWLEDRTGFTS 129 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p-~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (562)
||++++..|+|..||.+.....++++|.++| |+|++++.... .....+. ... .....+
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~g-~~v~v~~~~~~--~~~~~~~~~~~------------------~~~~~~ 59 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAARG-IEVAVLCASPE--PKGRDEERNGH------------------RVIRAP 59 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhCC-CceEEEecCCC--CcchhhhccCc------------------eEEEee
Confidence 6999999999989998999999999999998 99999987221 1000000 000 000000
Q ss_pred C-cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchH
Q 008544 130 T-FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDR 208 (562)
Q Consensus 130 ~-~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~ 208 (562)
. ......+. . ....... .+...+||+||++.+.....+ ...+..+..+.+.++|+...... .
T Consensus 60 ~~~~~~~~~~-------~-~~~~~~~-~~~~~~~Dii~~~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~------~ 122 (357)
T cd03795 60 SLLNVASTPF-------S-PSFFKQL-KKLAKKADVIHLHFPNPLADL--ALLLLPRKKPVVVHWHSDIVKQK------L 122 (357)
T ss_pred cccccccccc-------c-HHHHHHH-HhcCCCCCEEEEecCcchHHH--HHHHhccCceEEEEEcChhhccc------h
Confidence 0 00000000 0 0001011 155778999999987765333 12222222378889996532110 1
Q ss_pred HHHHHHHHHHHHHHHHhccEEEEcChhhhcc-------CCCccccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEee
Q 008544 209 LQAFLLEFVNSWLARVHCHKVIRLSAATQEY-------PNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGR 281 (562)
Q Consensus 209 ~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~-------~~~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr 281 (562)
...+.+.+.++..+. ||.++++|+..++. ..+.....+|++...+.+...... .......+.+.++|+|+
T Consensus 123 -~~~~~~~~~~~~~~~-~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~~~~~-~~~~~~~~~~~i~~~G~ 199 (357)
T cd03795 123 -LLKLYRPLQRRFLRR-ADAIVATSPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPDALEE-AIWRRAAGRPFFLFVGR 199 (357)
T ss_pred -hhhhhhHHHHHHHHh-cCEEEeCcHHHHHHHHHhcCCccceEEecCCCChhhcCCcchhhh-HhhcCCCCCcEEEEecc
Confidence 112223333333333 79999999887662 112223346888877654332211 12233455789999999
Q ss_pred ccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCCCC--hHHHHhhcCEEEEccC--C
Q 008544 282 MVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGRDH--ADPIFHDYKVFLNPST--T 355 (562)
Q Consensus 282 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~~~--~~~l~~~adv~v~pS~--~ 355 (562)
+.+.||++.+++++.++. +++|+++|+|+....+++.+++++.. +.+.+..++ ..++|+.||++++||. .
T Consensus 200 ~~~~K~~~~li~a~~~l~----~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~ 275 (357)
T cd03795 200 LVYYKGLDVLLEAAAALP----DAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERS 275 (357)
T ss_pred cccccCHHHHHHHHHhcc----CcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccc
Confidence 999999999999998876 79999999999888898888777665 444555443 4589999999999985 6
Q ss_pred CCCcHHHHHHHHcCCcEEeeCCCC-cccccc-CCceEee--CCHHHHHHHHHHHHhCCCC--CccHHHH----hcCCHHH
Q 008544 356 DVVCTATAEALAMGKIVVCANHPS-NDFFKQ-FPNCRTY--DGRNGFVEATLKALAEEPA--QPTDAQT----HQLSWES 425 (562)
Q Consensus 356 E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~-~~~g~~~--~d~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw~~ 425 (562)
|++|++++|||+||+|||+++.++ .+.+.+ +.+|+++ +|+++++++|.+++++++. .|+++++ +.|||+.
T Consensus 276 e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~ 355 (357)
T cd03795 276 EAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEAARERAEEEFTADR 355 (357)
T ss_pred cccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHhcchHh
Confidence 999999999999999999999987 777775 8899987 4899999999999998876 7777777 7899987
Q ss_pred H
Q 008544 426 A 426 (562)
Q Consensus 426 ~ 426 (562)
+
T Consensus 356 ~ 356 (357)
T cd03795 356 M 356 (357)
T ss_pred h
Confidence 5
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-29 Score=263.06 Aligned_cols=361 Identities=14% Similarity=0.079 Sum_probs=225.7
Q ss_pred EEEEecccC-CCcccccccHHHHHHHHHHcCCCeEEEEeecCCcccccc---c--cCCCceeCCchhhHHHHHHHhhhcc
Q 008544 52 IAIFTTASL-PWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQ---V--YPGNITFASPKEQEAYVRWWLEDRT 125 (562)
Q Consensus 52 I~ivt~~~~-P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~---~--~p~~i~~~~~~~~~~~~~~~~~~~~ 125 (562)
|+++|..++ |-..|..++++.++++|++. |+|++++......+... . +.+.+............+.. .
T Consensus 1 iL~~~~~~P~P~~~G~~~r~~~~~~~L~~~--~~v~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~ 74 (397)
T TIGR03087 1 ILYLVHRIPYPPNKGDKIRSFHLLRHLAAR--HRVHLGTFVDDPEDWQYAAALRPLCEEVCVVPLDPRVARLRSL----L 74 (397)
T ss_pred CeeecCCCCCCCCCCCcEeHHHHHHHHHhc--CcEEEEEeCCCcccHHHHHHHHHHhheeEEeecCcHHHHHHHH----h
Confidence 577876542 44567699999999999873 89999987321111100 0 00110000000000000000 0
Q ss_pred CCCCCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHH-HHhhh
Q 008544 126 GFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLE-YVKRE 204 (562)
Q Consensus 126 ~~~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~-~~~~~ 204 (562)
.......+.. . ...+......+.+.+++.++|+||+++.....+. . ......|.|...|+.... +....
T Consensus 75 ~l~~~~p~~~-----~-~~~~~~~~~~l~~~~~~~~~D~v~~~~~~~~~~~---~-~~~~~~p~i~~~~d~~~~~~~~~~ 144 (397)
T TIGR03087 75 GLLTGEPLSL-----P-YYRSRRLARWVNALLAAEPVDAIVVFSSAMAQYV---T-PHVRGVPRIVDFVDVDSDKWLQYA 144 (397)
T ss_pred hhcCCCCCcc-----h-hhCCHHHHHHHHHHHhhCCCCEEEEeccccceec---c-ccccCCCeEeehhhHHHHHHHHHH
Confidence 0100000000 0 0111112334667788899999999876443111 0 011123888888864221 11110
Q ss_pred h-chHHHHHH-------HHHHHHHHHHHhccEEEEcChhhhccCC-------Ccc-ccccccCCCCcCcchhhhHHhhcC
Q 008544 205 K-NDRLQAFL-------LEFVNSWLARVHCHKVIRLSAATQEYPN-------SIV-CNVHGVNPKFLEIGEKKMEQQQNG 268 (562)
Q Consensus 205 ~-~~~~~~~~-------~~~~~~~~~~~~ad~vi~~S~~~~~~~~-------~~~-~~v~GVd~~~~~~~~~~~~~~~~~ 268 (562)
. .....+.+ ...+.+.+.+ .+|.++++|+..++... ..+ +..||||.+.|.+.... ...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~e~~~~~-~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~----~~~ 219 (397)
T TIGR03087 145 RTKRWPLRWIYRREGRLLLAYERAIAA-RFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDY----PNP 219 (397)
T ss_pred hccCcchhHHHHHHHHHHHHHHHHHHh-hCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccc----cCC
Confidence 0 00101111 1222333333 38999999988876321 222 33479999887653221 111
Q ss_pred CCCCccEEEEEeeccccCCHHHHH----HHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHh
Q 008544 269 NKAFTKGAYYIGRMVWSKGYEELL----GLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFH 344 (562)
Q Consensus 269 ~~~~~~~il~vGr~~~~Kg~~~ll----~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~ 344 (562)
...+.+.++|+|++.+.||++.++ +++..+.+..|+++|+|+|+|+.. +++++.. ..++.+.|..++...+|+
T Consensus 220 ~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~~-~~~~l~~--~~~V~~~G~v~~~~~~~~ 296 (397)
T TIGR03087 220 YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPSP-AVRALAA--LPGVTVTGSVADVRPYLA 296 (397)
T ss_pred CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCChH-HHHHhcc--CCCeEEeeecCCHHHHHH
Confidence 233457899999999999999887 556667777899999999998753 4444432 224677788888899999
Q ss_pred hcCEEEEccC-CCCCcHHHHHHHHcCCcEEeeCCCCccccccCCceEee-CCHHHHHHHHHHHHhCCCC--CccHHHH--
Q 008544 345 DYKVFLNPST-TDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTY-DGRNGFVEATLKALAEEPA--QPTDAQT-- 418 (562)
Q Consensus 345 ~adv~v~pS~-~E~~~~~~lEAma~G~PVI~t~~~~~e~v~~~~~g~~~-~d~~~la~~i~~ll~~~~~--~l~~~ar-- 418 (562)
.+|++|+||. .||+|++++||||||+|||+|+.++..+...+.+|+++ +|+++++++|.++++|++. +|+++++
T Consensus 297 ~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i~~~~~~g~lv~~~~~~la~ai~~ll~~~~~~~~~~~~ar~~ 376 (397)
T TIGR03087 297 HAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGIDALPGAELLVAADPADFAAAILALLANPAEREELGQAARRR 376 (397)
T ss_pred hCCEEEecccccCCcccHHHHHHHcCCCEEecCcccccccccCCcceEeCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 9999999996 69999999999999999999997654444444567665 6999999999999998875 7888877
Q ss_pred --hcCCHHHHHHHHHHHHHh
Q 008544 419 --HQLSWESATERFLQVAEL 436 (562)
Q Consensus 419 --~~~sw~~~~~~~~~~y~~ 436 (562)
++|||+..++++.++|+.
T Consensus 377 v~~~fsw~~~~~~~~~~l~~ 396 (397)
T TIGR03087 377 VLQHYHWPRNLARLDALLEQ 396 (397)
T ss_pred HHHhCCHHHHHHHHHHHhcC
Confidence 689999999999999864
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-29 Score=275.05 Aligned_cols=273 Identities=11% Similarity=0.087 Sum_probs=187.0
Q ss_pred CCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhch--HHHH--HHHHHH-HHHHHHHhccEEEEcC
Q 008544 160 EEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKND--RLQA--FLLEFV-NSWLARVHCHKVIRLS 233 (562)
Q Consensus 160 ~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~--~~~~--~~~~~~-~~~~~~~~ad~vi~~S 233 (562)
.+||+||.|.+... +. +..++.+++ |.+.+.|+.-.......+.. .... .+...+ ........||.||+.|
T Consensus 407 ~~PDlIHaHYwdsg-~v--A~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT 483 (815)
T PLN00142 407 GKPDLIIGNYSDGN-LV--ASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITST 483 (815)
T ss_pred CCCCEEEECCccHH-HH--HHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCc
Confidence 46999999976554 33 566777777 99999996632111110000 0000 011111 1222222479999888
Q ss_pred hhhhc--------c--------------------CCCccccc-cccCCCCcCcchhhhH-------------------Hh
Q 008544 234 AATQE--------Y--------------------PNSIVCNV-HGVNPKFLEIGEKKME-------------------QQ 265 (562)
Q Consensus 234 ~~~~~--------~--------------------~~~~~~~v-~GVd~~~~~~~~~~~~-------------------~~ 265 (562)
..... + ...++..+ .|+|...|.|...... ..
T Consensus 484 ~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e 563 (815)
T PLN00142 484 YQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDE 563 (815)
T ss_pred HHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHH
Confidence 44432 1 01122223 4888865543321111 11
Q ss_pred hcCC--CCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCC------CH------HHHHHHHHhcCCeeE
Q 008544 266 QNGN--KAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGE------DF------DQIQRAAKKLKLVVR 331 (562)
Q Consensus 266 ~~~~--~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~------~~------~~l~~~~~~l~l~~~ 331 (562)
..+. .++.++|+++||+.+.||++.+++|+.++.+..++++|+|+|+|. +. +.+.++++++++..+
T Consensus 564 ~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~ 643 (815)
T PLN00142 564 HIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQ 643 (815)
T ss_pred HhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCc
Confidence 2332 345679999999999999999999999987777789999999872 11 346677888887644
Q ss_pred --EeCCC---CChHHHHh----hcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHH
Q 008544 332 --VYPGR---DHADPIFH----DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFV 399 (562)
Q Consensus 332 --~~~~~---~~~~~l~~----~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la 399 (562)
+.+.. .+..+++. .+|+||+||.+|+||++++||||||+|||+|+.|| .|++.++.+|++++ |+++++
T Consensus 644 V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA 723 (815)
T PLN00142 644 FRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAA 723 (815)
T ss_pred EEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHH
Confidence 44442 23344444 46999999999999999999999999999999998 99999999999985 999999
Q ss_pred HHHHHHH----hCCCC--CccHHHH----hcCCHHHHHHHHHHHHH
Q 008544 400 EATLKAL----AEEPA--QPTDAQT----HQLSWESATERFLQVAE 435 (562)
Q Consensus 400 ~~i~~ll----~~~~~--~l~~~ar----~~~sw~~~~~~~~~~y~ 435 (562)
++|.+++ +|+.. +|+++++ ++|||+.++++++++..
T Consensus 724 ~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~~ 769 (815)
T PLN00142 724 NKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLGG 769 (815)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 9998765 46554 7888776 68999999999999763
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=253.69 Aligned_cols=354 Identities=20% Similarity=0.173 Sum_probs=242.4
Q ss_pred EEEEecccCCC-cccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 52 IAIFTTASLPW-LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 52 I~ivt~~~~P~-~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
|++++..++|. .+|.+.....++++|.+.| |+|+++++.... ........ ..+.. . ..... .
T Consensus 1 iLii~~~~p~~~~~g~~~~~~~~~~~l~~~g-~~v~v~~~~~~~--~~~~~~~~---~~~~~-------~--~~~~~-~- 63 (377)
T cd03798 1 ILVISSLYPPPNNGGGGIFVKELARALAKRG-VEVTVLAPGPWG--PKLLDLLK---GRLVG-------V--ERLPV-L- 63 (377)
T ss_pred CeEeccCCCCCCCchHHHHHHHHHHHHHHCC-CceEEEecCCCC--CCchhhcc---ccccc-------c--ccccc-C-
Confidence 67888888665 6788889999999999998 999999883311 11000000 00000 0 00000 0
Q ss_pred cccccccccchhccchhhhHHhHHhhcC--cCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhch
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIP--DEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKND 207 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~--~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~ 207 (562)
........ ...........+.+.++ ..+||+||++.+....+. ...+.+..+ |++.++|+.+........
T Consensus 64 ~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~dii~~~~~~~~~~~--~~~~~~~~~~~~i~~~h~~~~~~~~~~~-- 136 (377)
T cd03798 64 LPVVPLLK---GPLLYLLAARALLKLLKLKRFRPDLIHAHFAYPDGFA--AALLKRKLGIPLVVTLHGSDVNLLPRKR-- 136 (377)
T ss_pred cchhhccc---cchhHHHHHHHHHHHHhcccCCCCEEEEeccchHHHH--HHHHHHhcCCCEEEEeecchhcccCchh--
Confidence 00000000 00111112345677787 889999999976555433 233334333 899999976543221110
Q ss_pred HHHHHHHHHHHHHHHHHhccEEEEcChhhhccC------CCcccc-ccccCCCCcCcchhhhHHhhcCCCCCccEEEEEe
Q 008544 208 RLQAFLLEFVNSWLARVHCHKVIRLSAATQEYP------NSIVCN-VHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIG 280 (562)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~------~~~~~~-v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vG 280 (562)
..+...+...+ .+|.++++|+..++.. ...+.. .+|+|...+.+...... .......+.+.++|+|
T Consensus 137 -----~~~~~~~~~~~-~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~g 209 (377)
T cd03798 137 -----LLRALLRRALR-RADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPADRAEA-RKLGLPEDKKVILFVG 209 (377)
T ss_pred -----hHHHHHHHHHh-cCCeEEeCCHHHHHHHHHhcCCCCceEEcCCCcCcccCCCcchHHH-HhccCCCCceEEEEec
Confidence 12222222333 2799999998888742 223333 35888877665433221 2223344578899999
Q ss_pred eccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCCC--ChHHHHhhcCEEEEccCCC
Q 008544 281 RMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGRD--HADPIFHDYKVFLNPSTTD 356 (562)
Q Consensus 281 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~~--~~~~l~~~adv~v~pS~~E 356 (562)
++.+.||++.+++++..+.++.++++++++|.+++.+.+++.++.++.. +.+.+..+ +..++++.||++++||..|
T Consensus 210 ~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~ 289 (377)
T cd03798 210 RLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLRE 289 (377)
T ss_pred cCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchhhc
Confidence 9999999999999999998888899999999998888888888877654 44555544 3459999999999999999
Q ss_pred CCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCCCccHHHH----hcCCHHHHHHH
Q 008544 357 VVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPAQPTDAQT----HQLSWESATER 429 (562)
Q Consensus 357 ~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~~l~~~ar----~~~sw~~~~~~ 429 (562)
++|++++|||+||+|||+++.++ .+++.++.+|++++ |+++++++|.++++++...+..+++ +.|+|+..+++
T Consensus 290 ~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 369 (377)
T cd03798 290 GFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWLRLGRAARRRVAERFSWENVAER 369 (377)
T ss_pred cCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHHHHhHHHHHHHHHHhhHHHHHHH
Confidence 99999999999999999999988 89999999888874 9999999999999988743333333 89999999999
Q ss_pred HHHHHHh
Q 008544 430 FLQVAEL 436 (562)
Q Consensus 430 ~~~~y~~ 436 (562)
+.++|+.
T Consensus 370 ~~~~~~~ 376 (377)
T cd03798 370 LLELYRE 376 (377)
T ss_pred HHHHHhh
Confidence 9999875
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=264.65 Aligned_cols=275 Identities=11% Similarity=-0.004 Sum_probs=196.3
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CE-EEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHH---
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FV-VGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARV--- 224 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~v-i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 224 (562)
+..+..++++.+|||||+|..... .+ +...+...+ |+ +...|..++... ..+.......+.+.
T Consensus 269 ~~~l~~~ir~~rpDIVHt~~~~a~-l~--g~laA~lagvpviv~~~h~~~~~~~---------~r~~~~e~~~~~~a~~i 336 (578)
T PRK15490 269 IKHLVPHLCERKLDYLSVWQDGAC-LM--IALAALIAGVPRIQLGLRGLPPVVR---------KRLFKPEYEPLYQALAV 336 (578)
T ss_pred HHHHHHHHHHcCCCEEEEcCcccH-HH--HHHHHHhcCCCEEEEeecccCCcch---------hhHHHHHHHHhhhhcee
Confidence 456888899999999999987653 12 111222222 55 445664222110 11111111112221
Q ss_pred --hccEEEEcChhhhc-------cCCCcc-ccccccCCCCcCcchhhh--HHh--hcCCCCCccEEEEEeeccccCCHHH
Q 008544 225 --HCHKVIRLSAATQE-------YPNSIV-CNVHGVNPKFLEIGEKKM--EQQ--QNGNKAFTKGAYYIGRMVWSKGYEE 290 (562)
Q Consensus 225 --~ad~vi~~S~~~~~-------~~~~~~-~~v~GVd~~~~~~~~~~~--~~~--~~~~~~~~~~il~vGr~~~~Kg~~~ 290 (562)
.+| +++.|..+++ .+.+++ +..||||++.|.+..... .+. ..+.+++.++++++||+.+.||+..
T Consensus 337 ~~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~ 415 (578)
T PRK15490 337 VPGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFA 415 (578)
T ss_pred Eecch-hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcEEEEEEEEehhcCHHH
Confidence 244 5666655444 233344 344799998776543211 111 2233455678999999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHc
Q 008544 291 LLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAM 368 (562)
Q Consensus 291 ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~ 368 (562)
+++++.++.++.|+++|+|+|+|+..+++++.++++++. +.|.+..+++.++|+.+|+||+||.+|+||++++|||||
T Consensus 416 LI~A~a~llk~~pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~ 495 (578)
T PRK15490 416 WIDFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMV 495 (578)
T ss_pred HHHHHHHHHhHCCCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCChhhHHHHHHhCCEEEEcccccCccHHHHHHHHh
Confidence 999999988888999999999999999999999998875 555677788889999999999999999999999999999
Q ss_pred CCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHH---HHHHhCCCC--CccHHHH----hcCCHHHHHHHHHHHHHh
Q 008544 369 GKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEAT---LKALAEEPA--QPTDAQT----HQLSWESATERFLQVAEL 436 (562)
Q Consensus 369 G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i---~~ll~~~~~--~l~~~ar----~~~sw~~~~~~~~~~y~~ 436 (562)
|+|||+|+.++ .|++.++.+|++++ |++++++++ .++.++... .|+++++ ++|||+.++++|.++|..
T Consensus 496 GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 496 GVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred CCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 99999999998 99999999999985 677777666 333333322 4666666 789999999999999975
Q ss_pred c
Q 008544 437 V 437 (562)
Q Consensus 437 ~ 437 (562)
.
T Consensus 576 ~ 576 (578)
T PRK15490 576 Q 576 (578)
T ss_pred c
Confidence 3
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-28 Score=253.27 Aligned_cols=335 Identities=18% Similarity=0.162 Sum_probs=229.7
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||+++++. .+|.+.....++++|.+.| |+|+++++...... .....++.+. ..+.
T Consensus 1 kIl~i~~~----~~g~~~~~~~l~~~L~~~g-~~v~~~~~~~~~~~--~~~~~~~~~~------------------~~~~ 55 (359)
T cd03808 1 KILHIVTV----DGGLYSFRLPLIKALRAAG-YEVHVVAPPGDELE--ELEALGVKVI------------------PIPL 55 (359)
T ss_pred CeeEEEec----chhHHHHHHHHHHHHHhcC-CeeEEEecCCCccc--ccccCCceEE------------------eccc
Confidence 58899886 4677888899999999998 99999987321110 0000111100 0000
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHh--hcCCEEEEEcCCcHHHHhhhhchH
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKA--KFRFVVGIVHTNYLEYVKREKNDR 208 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~--~~~~vi~~~h~~~~~~~~~~~~~~ 208 (562)
..... ...........+.+.+++.+||+||++..... ++ +....+ +..+++...|+....... ..
T Consensus 56 ~~~~~------~~~~~~~~~~~~~~~~~~~~~dvv~~~~~~~~-~~--~~~~~~~~~~~~~i~~~~~~~~~~~~----~~ 122 (359)
T cd03808 56 DRRGI------NPFKDLKALLRLYRLLRKERPDIVHTHTPKPG-IL--GRLAARLAGVPKVIYTVHGLGFVFTS----GG 122 (359)
T ss_pred ccccc------ChHhHHHHHHHHHHHHHhcCCCEEEEccccch-hH--HHHHHHHcCCCCEEEEecCcchhhcc----ch
Confidence 00000 00111122345677788899999999976543 22 122222 223677777755332221 11
Q ss_pred HHHHHHHHHHHHHHHHhccEEEEcChhhhccCC--------Cccc-cccccCCCCcCcchhhhHHhhcCCCCCccEEEEE
Q 008544 209 LQAFLLEFVNSWLARVHCHKVIRLSAATQEYPN--------SIVC-NVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYI 279 (562)
Q Consensus 209 ~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~--------~~~~-~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~v 279 (562)
........+.++..+. +|.+++.|+..++... ..+. ..+|++...+.+.... ...+.+.++|+
T Consensus 123 ~~~~~~~~~~~~~~~~-~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~~ 194 (359)
T cd03808 123 LKRRLYLLLERLALRF-TDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEP-------IPEDDPVFLFV 194 (359)
T ss_pred hHHHHHHHHHHHHHhh-ccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccc-------cCCCCcEEEEE
Confidence 1223444444444444 7999999988877321 1111 2236666555432211 23346889999
Q ss_pred eeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHH-HHhcCC--eeEEeCCCCChHHHHhhcCEEEEccCCC
Q 008544 280 GRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRA-AKKLKL--VVRVYPGRDHADPIFHDYKVFLNPSTTD 356 (562)
Q Consensus 280 Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~-~~~l~l--~~~~~~~~~~~~~l~~~adv~v~pS~~E 356 (562)
|++.+.||++.+++++..+.++.++++|+++|.++........ +.+.+. .+.+.+..++..++|+.+|++++||..|
T Consensus 195 G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~i~ps~~e 274 (359)
T cd03808 195 ARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAADVFVLPSYRE 274 (359)
T ss_pred eccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHHHhccEEEecCccc
Confidence 9999999999999999999888889999999998875554443 444443 3556777888899999999999999999
Q ss_pred CCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH----hcCCHHHHH
Q 008544 357 VVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT----HQLSWESAT 427 (562)
Q Consensus 357 ~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw~~~~ 427 (562)
++|++++|||+||+|||+++.++ .+++.++.+|++++ |+++++++|.+++.+++. +++++++ ++|+|+.++
T Consensus 275 ~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 354 (359)
T cd03808 275 GLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVV 354 (359)
T ss_pred CcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 99999999999999999999997 89999899999974 899999999999998875 6777665 889999999
Q ss_pred HHHH
Q 008544 428 ERFL 431 (562)
Q Consensus 428 ~~~~ 431 (562)
++++
T Consensus 355 ~~~~ 358 (359)
T cd03808 355 KKLL 358 (359)
T ss_pred HHhh
Confidence 8875
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-29 Score=257.49 Aligned_cols=317 Identities=17% Similarity=0.107 Sum_probs=227.9
Q ss_pred CeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCC
Q 008544 50 QHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTS 129 (562)
Q Consensus 50 ~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (562)
|||+++++. +..+|.+.....++++|.++| |+|++++... .
T Consensus 1 MkIl~~~~~--~~~gG~~~~~~~l~~~l~~~G-~~v~v~~~~~-----------~------------------------- 41 (365)
T cd03825 1 MKVLHLNTS--DISGGAARAAYRLHRALQAAG-VDSTMLVQEK-----------K------------------------- 41 (365)
T ss_pred CeEEEEecC--CCCCcHHHHHHHHHHHHHhcC-CceeEEEeec-----------c-------------------------
Confidence 689999874 556888999999999999998 9999998711 0
Q ss_pred CcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhh---cCCEEEEEcCCcHHHHhh---
Q 008544 130 TFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAK---FRFVVGIVHTNYLEYVKR--- 203 (562)
Q Consensus 130 ~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~---~~~vi~~~h~~~~~~~~~--- 203 (562)
.+.+.++..+|||||+|......+. ..+..+ ..|.|.++|+.+......
T Consensus 42 ----------------------~~~~~~~~~~~diih~~~~~~~~~~---~~~~~~~~~~~~~v~~~hd~~~~~~~~~~~ 96 (365)
T cd03825 42 ----------------------ALISKIEIINADIVHLHWIHGGFLS---IEDLSKLLDRKPVVWTLHDMWPFTGGCHYP 96 (365)
T ss_pred ----------------------hhhhChhcccCCEEEEEccccCccC---HHHHHHHHcCCCEEEEcccCcccccccCCc
Confidence 0344566789999999875443221 112222 238999999754321100
Q ss_pred ------------------hhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhccCC--------CccccccccCCCCcCc
Q 008544 204 ------------------EKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYPN--------SIVCNVHGVNPKFLEI 257 (562)
Q Consensus 204 ------------------~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~--------~~~~~v~GVd~~~~~~ 257 (562)
.................+.. .++.++++|+..++... +..+..+|+|...+.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~ 175 (365)
T cd03825 97 GGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWAD-LNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRP 175 (365)
T ss_pred cccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhcc-CCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCC
Confidence 00001111122222222211 25789999988777432 2223346999887766
Q ss_pred chhhhHHhhcCCCCCccEEEEEeeccc--cCCHHHHHHHHHHHHHh-cCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeC
Q 008544 258 GEKKMEQQQNGNKAFTKGAYYIGRMVW--SKGYEELLGLLNIYHKE-LAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYP 334 (562)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~il~vGr~~~--~Kg~~~ll~a~~~l~~~-~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~ 334 (562)
......+...+.+++..++++.|+... .||++.+++++..+.++ .++++++++|.++..... ..+..+.+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-----~~~~~v~~~g 250 (365)
T cd03825 176 RDKREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-----DLPFPVHYLG 250 (365)
T ss_pred CcHHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-----cCCCceEecC
Confidence 555545555666666677777777655 89999999999998765 578999999998654321 2333455666
Q ss_pred CCCC---hHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhC
Q 008544 335 GRDH---ADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAE 408 (562)
Q Consensus 335 ~~~~---~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~ 408 (562)
...+ ..++|+.+|++++||..|++|++++|||+||+|||+++.++ .|++.++.+|++++ |++++++++.+++++
T Consensus 251 ~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~ 330 (365)
T cd03825 251 SLNDDESLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLAD 330 (365)
T ss_pred CcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhC
Confidence 6553 44889999999999999999999999999999999999987 89999988999875 899999999999998
Q ss_pred CCC--CccHHHH----hcCCHHHHHHHHHHHHHh
Q 008544 409 EPA--QPTDAQT----HQLSWESATERFLQVAEL 436 (562)
Q Consensus 409 ~~~--~l~~~ar----~~~sw~~~~~~~~~~y~~ 436 (562)
++. +|+++++ ++|||+..++++.++|+.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 331 PDEREELGEAARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 874 6777665 689999999999999975
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-29 Score=254.86 Aligned_cols=340 Identities=15% Similarity=0.106 Sum_probs=229.2
Q ss_pred eEEEEecccCCC-cccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccC-CCceeCCchhhHHHHHHHhhhccCCC
Q 008544 51 HIAIFTTASLPW-LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYP-GNITFASPKEQEAYVRWWLEDRTGFT 128 (562)
Q Consensus 51 rI~ivt~~~~P~-~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p-~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (562)
||++++..++|. .+|.......++++|.++| |+|+++++.... ...... .......... + ....
T Consensus 1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~g-~~v~v~~~~~~~--~~~~~~~~~~~~~~~~~-------~---~~~~- 66 (359)
T cd03823 1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKRG-HEVAVLTAGEDP--PRQDKEVIGVVVYGRPI-------D---EVLR- 66 (359)
T ss_pred CeeEEcccCCcccccchHHHHHHHHHHHHhcC-CceEEEeCCCCC--CCcccccccceeecccc-------c---cccC-
Confidence 699999998876 3666677889999999998 999999873211 110010 0000000000 0 0000
Q ss_pred CCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhch
Q 008544 129 STFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKND 207 (562)
Q Consensus 129 ~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~ 207 (562)
.......... ...........+.+.+++.+||+||++.+...... ...+.++.+ |++.++|+.+......
T Consensus 67 --~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~--~~~~~~~~~~~~i~~~hd~~~~~~~~---- 137 (359)
T cd03823 67 --SALPRDLFHL-SDYDNPAVVAEFARLLEDFRPDVVHFHHLQGLGVS--ILRAARDRGIPIVLTLHDYWLICPRQ---- 137 (359)
T ss_pred --CCchhhhhHH-HhccCHHHHHHHHHHHHHcCCCEEEECCccchHHH--HHHHHHhcCCCEEEEEeeeeeecchh----
Confidence 0000000000 00011111344677788899999999987544222 122333333 8999999653221100
Q ss_pred HHHHHHHHHHHHHHHHHhccEEEEcChhhhccCC------Cc-cccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEe
Q 008544 208 RLQAFLLEFVNSWLARVHCHKVIRLSAATQEYPN------SI-VCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIG 280 (562)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~------~~-~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vG 280 (562)
...... .|.++++|+..++... .. ....+|+|...+.+... ..+.+...++|+|
T Consensus 138 ----------~~~~~~--~d~ii~~s~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~~-------~~~~~~~~i~~~G 198 (359)
T cd03823 138 ----------GLFKKG--GDAVIAPSRFLLDRYVANGLFAEKISVIRNGIDLDRAKRPRR-------APPGGRLRFGFIG 198 (359)
T ss_pred ----------hhhccC--CCEEEEeCHHHHHHHHHcCCCccceEEecCCcChhhcccccc-------CCCCCceEEEEEe
Confidence 000111 3999999988777321 12 22335787766543221 2344567899999
Q ss_pred eccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCC--CChHHHHhhcCEEEEccC-CCC
Q 008544 281 RMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGR--DHADPIFHDYKVFLNPST-TDV 357 (562)
Q Consensus 281 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~--~~~~~l~~~adv~v~pS~-~E~ 357 (562)
++.+.||++.+++++..+.+ ++++|+++|.++......... .....+.+.+.. ++..++|+.+|++++||. .|+
T Consensus 199 ~~~~~k~~~~li~~~~~l~~--~~~~l~i~G~~~~~~~~~~~~-~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~ 275 (359)
T cd03823 199 QLTPHKGVDLLLEAFKRLPR--GDIELVIVGNGLELEEESYEL-EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPEN 275 (359)
T ss_pred cCccccCHHHHHHHHHHHHh--cCcEEEEEcCchhhhHHHHhh-cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCC
Confidence 99999999999999999876 689999999987765444333 333446666665 566699999999999997 799
Q ss_pred CcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHHhcCCHHHHHHHHHH
Q 008544 358 VCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQTHQLSWESATERFLQ 432 (562)
Q Consensus 358 ~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar~~~sw~~~~~~~~~ 432 (562)
+|++++|||+||+|||+++.++ .|++.++.+|++++ |+++++++|.++++++.. .+++++++..+.+.+++++++
T Consensus 276 ~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (359)
T cd03823 276 FPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAGIEPPRSIEDQAEEYLK 355 (359)
T ss_pred CChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHHhHHHhhhHHHHHHHHHH
Confidence 9999999999999999999998 89999988999974 799999999999998875 788888877777999999999
Q ss_pred HHH
Q 008544 433 VAE 435 (562)
Q Consensus 433 ~y~ 435 (562)
+|+
T Consensus 356 ~~~ 358 (359)
T cd03823 356 LYR 358 (359)
T ss_pred Hhh
Confidence 986
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-29 Score=256.68 Aligned_cols=314 Identities=17% Similarity=0.157 Sum_probs=218.2
Q ss_pred ccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCCcccccccccchhc
Q 008544 64 TGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAAD 143 (562)
Q Consensus 64 ~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~y~~r~~~~ 143 (562)
||++.....++++|.++| |+|+++++... .. .. ... ..... ..+...... .
T Consensus 10 gG~e~~~~~l~~~L~~~g-~~v~v~~~~~~--~~-------------~~----~~~---~~~~~---~~~~~~~~~---~ 60 (355)
T cd03819 10 GGVERGTLELARALVERG-HRSLVASAGGR--LV-------------AE----LEA---EGSRH---IKLPFISKN---P 60 (355)
T ss_pred CcHHHHHHHHHHHHHHcC-CEEEEEcCCCc--hH-------------HH----HHh---cCCeE---EEccccccc---h
Confidence 898999999999999998 99999976210 00 00 000 00000 000000000 0
Q ss_pred cchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHH
Q 008544 144 KKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLA 222 (562)
Q Consensus 144 ~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (562)
.........+.+.+++.+||+||+++.... +. +..+.+..+ |++.++|+.+.... .....+.
T Consensus 61 ~~~~~~~~~l~~~~~~~~~dii~~~~~~~~-~~--~~~~~~~~~~~~i~~~h~~~~~~~--------------~~~~~~~ 123 (355)
T cd03819 61 LRILLNVARLRRLIREEKVDIVHARSRAPA-WS--AYLAARRTRPPFVTTVHGFYSVNF--------------RYNAIMA 123 (355)
T ss_pred hhhHHHHHHHHHHHHHcCCCEEEECCCchh-HH--HHHHHHhcCCCEEEEeCCchhhHH--------------HHHHHHH
Confidence 111112345677788899999999986543 22 222333334 89999997653311 1111222
Q ss_pred HHhccEEEEcChhhhccCC-------Ccc-ccccccCCCCcCcchhhh-----HHhhcCCCCCccEEEEEeeccccCCHH
Q 008544 223 RVHCHKVIRLSAATQEYPN-------SIV-CNVHGVNPKFLEIGEKKM-----EQQQNGNKAFTKGAYYIGRMVWSKGYE 289 (562)
Q Consensus 223 ~~~ad~vi~~S~~~~~~~~-------~~~-~~v~GVd~~~~~~~~~~~-----~~~~~~~~~~~~~il~vGr~~~~Kg~~ 289 (562)
+ +|.++++|+..++... ..+ ...+|+|...+.+..... .+...+.+++.++++|+|++.++||++
T Consensus 124 ~--~~~vi~~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~ 201 (355)
T cd03819 124 R--GDRVIAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQE 201 (355)
T ss_pred h--cCEEEEeCHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHcCCCCCceEEEEeeccccccCHH
Confidence 2 7999999988877322 222 233688887765432211 123344556678899999999999999
Q ss_pred HHHHHHHHHHHhcCCcEEEEEeCCCCH----HHHHHHHHhcCCe--eEEeCCCCChHHHHhhcCEEEEcc-CCCCCcHHH
Q 008544 290 ELLGLLNIYHKELAGLEMDLYGNGEDF----DQIQRAAKKLKLV--VRVYPGRDHADPIFHDYKVFLNPS-TTDVVCTAT 362 (562)
Q Consensus 290 ~ll~a~~~l~~~~~~~~l~ivG~g~~~----~~l~~~~~~l~l~--~~~~~~~~~~~~l~~~adv~v~pS-~~E~~~~~~ 362 (562)
.+++++..+.+..++++++++|.++.. +.+.+.+++++.. +.+++..+++.++|+.+|++++|| ..|++|+++
T Consensus 202 ~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l 281 (355)
T cd03819 202 VFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTA 281 (355)
T ss_pred HHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHH
Confidence 999999999888789999999998764 3344566666654 566777888899999999999999 799999999
Q ss_pred HHHHHcCCcEEeeCCCC-ccccccCCceEee--CCHHHHHHHHHHHHh-CCCC--CccHHHH----hcCCHHH
Q 008544 363 AEALAMGKIVVCANHPS-NDFFKQFPNCRTY--DGRNGFVEATLKALA-EEPA--QPTDAQT----HQLSWES 425 (562)
Q Consensus 363 lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~--~d~~~la~~i~~ll~-~~~~--~l~~~ar----~~~sw~~ 425 (562)
+||||||+|||+++.++ .|++.++.+|+++ +|+++++++|..++. +++. +++++++ .+|+|+.
T Consensus 282 ~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~ 354 (355)
T cd03819 282 VEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDR 354 (355)
T ss_pred HHHHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999987 8999998899997 499999999976665 4443 6777776 7888875
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-29 Score=255.51 Aligned_cols=326 Identities=15% Similarity=0.114 Sum_probs=228.0
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||+++++.|+|. ++..+..++..|.++| |+|++++......... .. . ....... ..+.
T Consensus 1 ki~~~~~~~~~~---~~~~~~~~~~~L~~~g-~~v~v~~~~~~~~~~~--~~-~-~~~~~~~-~~~~------------- 58 (355)
T cd03799 1 KIAYLVKEFPRL---SETFILREILALEAAG-HEVEIFSLRPPEDTLV--HP-E-DRAELAR-TRYL------------- 58 (355)
T ss_pred CEEEECCCCCCc---chHHHHHHHHHHHhCC-CeEEEEEecCcccccc--cc-c-ccccccc-hHHH-------------
Confidence 699999998553 5778899999999998 9999998732110000 00 0 0000000 0000
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhc--CCEEEEEcCCcHHHHhhhhchH
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKF--RFVVGIVHTNYLEYVKREKNDR 208 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~--~~vi~~~h~~~~~~~~~~~~~~ 208 (562)
............+.+.+++.++|+||+|........ ..+..+. .+++.++|....... . ..
T Consensus 59 ----------~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~---~~ 121 (355)
T cd03799 59 ----------ARSLALLAQALVLARELRRLGIDHIHAHFGTTPATV---AMLASRLGGIPYSFTAHGKDIFRS-P---DA 121 (355)
T ss_pred ----------HHHHHHHHHHHHHHHHHHhcCCCEEEECCCCchHHH---HHHHHHhcCCCEEEEEeccccccc-C---ch
Confidence 000111111233555667789999999987544222 2233332 378888885422111 0 00
Q ss_pred HHHHHHHHHHHHHHHHhccEEEEcChhhhccCCC-------cc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEe
Q 008544 209 LQAFLLEFVNSWLARVHCHKVIRLSAATQEYPNS-------IV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIG 280 (562)
Q Consensus 209 ~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~-------~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vG 280 (562)
......+.. +|.++++|+..++...+ .+ ...+|+|.+.+.+.. .....+...++|+|
T Consensus 122 ------~~~~~~~~~--~~~vi~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~-------~~~~~~~~~i~~~g 186 (355)
T cd03799 122 ------IDLDEKLAR--ADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRP-------PPPPGEPLRILSVG 186 (355)
T ss_pred ------HHHHHHHhh--CCEEEECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCcc-------ccccCCCeEEEEEe
Confidence 111222222 79999999888874322 12 223588876665432 11223467899999
Q ss_pred eccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCC--CChHHHHhhcCEEEEccCC-
Q 008544 281 RMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGR--DHADPIFHDYKVFLNPSTT- 355 (562)
Q Consensus 281 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~--~~~~~l~~~adv~v~pS~~- 355 (562)
++.+.||++.+++++.++.++.++++|+++|.|+..+.+++.++++++. +.+.+.. +++.++|+.+|++++||..
T Consensus 187 ~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~ 266 (355)
T cd03799 187 RLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTA 266 (355)
T ss_pred eeccccCHHHHHHHHHHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecceec
Confidence 9999999999999999998888899999999999989999988887664 4455554 4566999999999999998
Q ss_pred -----CCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH----hcC
Q 008544 356 -----DVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT----HQL 421 (562)
Q Consensus 356 -----E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar----~~~ 421 (562)
|++|++++|||+||+|||+++.++ .+++.++.+|++++ |+++++++|.++++++.. .|+++++ ++|
T Consensus 267 ~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~ 346 (355)
T cd03799 267 ADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPELRREMGEAGRARVEEEF 346 (355)
T ss_pred CCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999987 89999998999984 899999999999998875 7777776 789
Q ss_pred CHHHHHHHH
Q 008544 422 SWESATERF 430 (562)
Q Consensus 422 sw~~~~~~~ 430 (562)
+|+..++++
T Consensus 347 s~~~~~~~l 355 (355)
T cd03799 347 DIRKQAARL 355 (355)
T ss_pred CHHHHhhcC
Confidence 999988753
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-29 Score=258.79 Aligned_cols=343 Identities=15% Similarity=0.046 Sum_probs=229.4
Q ss_pred eEEEEecccCC-CcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCC
Q 008544 51 HIAIFTTASLP-WLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTS 129 (562)
Q Consensus 51 rI~ivt~~~~P-~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (562)
||+|++..+.| ..||++..+..++++|.+.| |+|+++++........ .... . .....+ ...
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~~-~~v~~~~~~~~~~~~~--~~~~------~---~~~~~~---~~~--- 62 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELLRALLKLD-PEEVLLLLPGAPGLLL--LPLR------A---ALRLLL---RLP--- 62 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHHHHHHhcC-CceEEEEecCcccccc--ccch------h---cccccc---ccc---
Confidence 69999999988 89999999999999999998 9999998833111000 0000 0 000000 000
Q ss_pred CcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchHH
Q 008544 130 TFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRL 209 (562)
Q Consensus 130 ~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~ 209 (562)
..................+...+||+||+++...... .....|++.++|+.+...........
T Consensus 63 ---------~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~-------~~~~~~~i~~~hd~~~~~~~~~~~~~- 125 (365)
T cd03809 63 ---------RRLLWGLLFLLRAGDRLLLLLLGLDLLHSPHNTAPLL-------RLRGVPVVVTIHDLIPLRFPEYFSPG- 125 (365)
T ss_pred ---------cccccchhhHHHHHHHHHhhhcCCCeeeecccccCcc-------cCCCCCEEEEeccchhhhCcccCCHH-
Confidence 0000011111122233445558899999998765511 12223899999976543322211111
Q ss_pred HHHHHHHHHHHHHHHhccEEEEcChhhhccC-------CCcc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEee
Q 008544 210 QAFLLEFVNSWLARVHCHKVIRLSAATQEYP-------NSIV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGR 281 (562)
Q Consensus 210 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~-------~~~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr 281 (562)
.....+.......+. +|.++++|+..++.. ...+ ...+|++...+....... ........+.+.++|+|+
T Consensus 126 ~~~~~~~~~~~~~~~-~d~~i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~G~ 203 (365)
T cd03809 126 FRRYFRRLLRRALRR-ADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAE-VLRALYLLPRPYFLYVGT 203 (365)
T ss_pred HHHHHHHHHHHHHHH-cCEEEEccHHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHH-HHHHhcCCCCCeEEEeCC
Confidence 122333333333333 799999998877732 1222 233588887765433222 222334445788999999
Q ss_pred ccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCC-HHHHHHHHHhcCCe--eEEeCCC--CChHHHHhhcCEEEEccCCC
Q 008544 282 MVWSKGYEELLGLLNIYHKELAGLEMDLYGNGED-FDQIQRAAKKLKLV--VRVYPGR--DHADPIFHDYKVFLNPSTTD 356 (562)
Q Consensus 282 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~-~~~l~~~~~~l~l~--~~~~~~~--~~~~~l~~~adv~v~pS~~E 356 (562)
+.+.||++.+++++..+.+..++++|+++|.+.. ........++++.. +.+.+.. ++..++|+.+|++++||..|
T Consensus 204 ~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e 283 (365)
T cd03809 204 IEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLYE 283 (365)
T ss_pred CccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccchhc
Confidence 9999999999999999998888899999998654 33333333444444 4555555 44559999999999999999
Q ss_pred CCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEee--CCHHHHHHHHHHHHhCCCC--CccHHHH---hcCCHHHHHH
Q 008544 357 VVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTY--DGRNGFVEATLKALAEEPA--QPTDAQT---HQLSWESATE 428 (562)
Q Consensus 357 ~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~--~d~~~la~~i~~ll~~~~~--~l~~~ar---~~~sw~~~~~ 428 (562)
++|++++|||++|+|||+++.++ .|++.+ +|+++ +|+++++++|.++++|++. .|+++++ ++|+|++.++
T Consensus 284 ~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~--~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~sw~~~~~ 361 (365)
T cd03809 284 GFGLPVLEAMACGTPVIASNISSLPEVAGD--AALYFDPLDPEALAAAIERLLEDPALREELRERGLARAKRFSWEKTAR 361 (365)
T ss_pred cCCCCHHHHhcCCCcEEecCCCCccceecC--ceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999999999999999987 888754 45544 5899999999999998886 7777764 8999999999
Q ss_pred HHHH
Q 008544 429 RFLQ 432 (562)
Q Consensus 429 ~~~~ 432 (562)
++++
T Consensus 362 ~~~~ 365 (365)
T cd03809 362 RTLD 365 (365)
T ss_pred HHhC
Confidence 8863
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=264.37 Aligned_cols=266 Identities=13% Similarity=0.106 Sum_probs=193.7
Q ss_pred hhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcC
Q 008544 155 EIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLS 233 (562)
Q Consensus 155 ~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S 233 (562)
+.|...++||+|++.+....+. .+..+.. |++.++|..............+............. .+|.+|++|
T Consensus 205 ~~L~~~~~di~i~dr~~~~~~~----~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~--~~D~iI~~S 278 (500)
T TIGR02918 205 KQLNLTKKDIIILDRSTGIGQA----VLENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNAD--YIDFFITAT 278 (500)
T ss_pred HHHhCCCCCEEEEcCCcccchH----HHhcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchh--hCCEEEECC
Confidence 3345568999999887655322 1223323 78889997542211111111111111222222222 369999999
Q ss_pred hhhhccC----------CCc-cccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhc
Q 008544 234 AATQEYP----------NSI-VCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKEL 302 (562)
Q Consensus 234 ~~~~~~~----------~~~-~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~ 302 (562)
+..++.. ... ....+|++...+.+. .......|+|+||+.+.||++.+++|+.++.++.
T Consensus 279 ~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~----------~~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~ 348 (500)
T TIGR02918 279 DIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYPE----------QERKPFSIITASRLAKEKHIDWLVKAVVKAKKSV 348 (500)
T ss_pred HHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCcc----------cccCCeEEEEEeccccccCHHHHHHHHHHHHhhC
Confidence 8765521 111 222346554333211 0112457999999999999999999999999999
Q ss_pred CCcEEEEEeCCCCHHHHHHHHHhcCCeeEE-eCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCC-C-
Q 008544 303 AGLEMDLYGNGEDFDQIQRAAKKLKLVVRV-YPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHP-S- 379 (562)
Q Consensus 303 ~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~-~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~-~- 379 (562)
|+++|+|+|+|+..+.++++++++++...+ +.|..+..++|+.||++|+||..|+||++++||||||+|||+++.+ |
T Consensus 349 p~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~ 428 (500)
T TIGR02918 349 PELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHRNLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGN 428 (500)
T ss_pred CCeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCCCHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCC
Confidence 999999999999989999999998876444 5556788899999999999999999999999999999999999986 5
Q ss_pred ccccccCCceEeeC------C----HHHHHHHHHHHHhCCCC-CccHHHH---hcCCHHHHHHHHHHHHHh
Q 008544 380 NDFFKQFPNCRTYD------G----RNGFVEATLKALAEEPA-QPTDAQT---HQLSWESATERFLQVAEL 436 (562)
Q Consensus 380 ~e~v~~~~~g~~~~------d----~~~la~~i~~ll~~~~~-~l~~~ar---~~~sw~~~~~~~~~~y~~ 436 (562)
+|++.++.+|++++ | +++|+++|.++++++.. +|+++++ +.|+|+.+++++.++++.
T Consensus 429 ~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 429 PTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEGFLTANIIEKWKKLVRE 499 (500)
T ss_pred HHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 89999999999975 2 88999999999954333 7888777 899999999999998875
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-27 Score=250.63 Aligned_cols=207 Identities=12% Similarity=0.057 Sum_probs=161.9
Q ss_pred hccEEEEcChhhhccCC------Ccc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHH
Q 008544 225 HCHKVIRLSAATQEYPN------SIV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNI 297 (562)
Q Consensus 225 ~ad~vi~~S~~~~~~~~------~~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~ 297 (562)
.+|.|++.|+.+++... +.+ +..+|+|.+.+.... ...+.+.+.++++||+.++||++.+|+|+.+
T Consensus 220 ~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~-------~~~~~~~~~il~vGR~~~~Kg~~llI~A~~~ 292 (463)
T PLN02949 220 CAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALP-------LERSEDPPYIISVAQFRPEKAHALQLEAFAL 292 (463)
T ss_pred CCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCC-------ccccCCCCEEEEEEeeeccCCHHHHHHHHHH
Confidence 48999999999887321 122 222466654332111 0111235789999999999999999999998
Q ss_pred HHHh----cCCcEEEEEeCCCC------HHHHHHHHHhcCCe--eEEeCCC--CChHHHHhhcCEEEEccCCCCCcHHHH
Q 008544 298 YHKE----LAGLEMDLYGNGED------FDQIQRAAKKLKLV--VRVYPGR--DHADPIFHDYKVFLNPSTTDVVCTATA 363 (562)
Q Consensus 298 l~~~----~~~~~l~ivG~g~~------~~~l~~~~~~l~l~--~~~~~~~--~~~~~l~~~adv~v~pS~~E~~~~~~l 363 (562)
+.++ .|+++|+|+|+++. .++++++++++++. +.|.+.. ++..++|+.||++++||..|+||++++
T Consensus 293 l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvl 372 (463)
T PLN02949 293 ALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVV 372 (463)
T ss_pred HHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHH
Confidence 7653 47899999998742 25788889988876 4455554 455689999999999999999999999
Q ss_pred HHHHcCCcEEeeCCCC--cccccc---CCceEeeCCHHHHHHHHHHHHhCCC-C--CccHHHH---hcCCHHHHHHHHHH
Q 008544 364 EALAMGKIVVCANHPS--NDFFKQ---FPNCRTYDGRNGFVEATLKALAEEP-A--QPTDAQT---HQLSWESATERFLQ 432 (562)
Q Consensus 364 EAma~G~PVI~t~~~~--~e~v~~---~~~g~~~~d~~~la~~i~~ll~~~~-~--~l~~~ar---~~~sw~~~~~~~~~ 432 (562)
||||||+|||+++.+| .|++.+ +.+|++++|+++++++|.+++++++ . +|+++++ ++|||+...+++.+
T Consensus 373 EAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~ 452 (463)
T PLN02949 373 EYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLATTVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKD 452 (463)
T ss_pred HHHHcCCcEEEeCCCCCcceeeecCCCCcccccCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 9999999999999987 477765 6789999999999999999998643 2 7887776 78999999999999
Q ss_pred HHHhcC
Q 008544 433 VAELVG 438 (562)
Q Consensus 433 ~y~~~~ 438 (562)
.|+...
T Consensus 453 ~i~~l~ 458 (463)
T PLN02949 453 AIRPIL 458 (463)
T ss_pred HHHHHH
Confidence 998765
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=251.37 Aligned_cols=349 Identities=11% Similarity=-0.012 Sum_probs=208.7
Q ss_pred CeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCC---ceeCCchhhHHHHHHHhhhccC
Q 008544 50 QHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGN---ITFASPKEQEAYVRWWLEDRTG 126 (562)
Q Consensus 50 ~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~---i~~~~~~~~~~~~~~~~~~~~~ 126 (562)
|||+.|.+.. ..||++..+..+++.|.++| |+|.++........+ ..-++. .....+.. ..+. .....|..
T Consensus 1 mkil~i~~~l--~~GGaeri~~~L~~~l~~~G-~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~ 74 (405)
T PRK10125 1 MNILQFNVRL--AEGGAAGVALDLHQRALQQG-LASHFVYGYGKGGKE-SVSHQNYPQVIKHTPRM-TAMA-NIALFRLF 74 (405)
T ss_pred CeEEEEEeee--cCCchhHHHHHHHHHHHhcC-CeEEEEEecCCCccc-ccccCCcceEEEecccH-HHHH-HHHHHHhc
Confidence 6899998754 35888888899999999998 999999763211111 000000 00000000 0000 00000000
Q ss_pred CCCCcccccccccchhccchhhhHHhHHhhc-CcCCCcEEEecCCchh--hhhhchH-----HHHhhcCCEEEEEcCCcH
Q 008544 127 FTSTFDTRFYPGKFAADKKSILAVGDITEII-PDEEADIAVLEEPEHL--TWFHHGK-----RWKAKFRFVVGIVHTNYL 198 (562)
Q Consensus 127 ~~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i-~~~~pDvV~~~~~~~~--~~~~~~~-----~~~~~~~~vi~~~h~~~~ 198 (562)
. +........+.++| ++.+|||||+|..... +...... .+.....|+|.|.|+.+.
T Consensus 75 -----~-----------~~~~~~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~ 138 (405)
T PRK10125 75 -----N-----------RDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWS 138 (405)
T ss_pred -----c-----------hhhcchHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccc
Confidence 0 01111233455656 5789999999986643 1110000 012222499999998864
Q ss_pred HH------------Hhh---------hhch--HHHHHHHHHHHHHHHHH--hccEEEEcChhhhcc-----CCCcc-ccc
Q 008544 199 EY------------VKR---------EKND--RLQAFLLEFVNSWLARV--HCHKVIRLSAATQEY-----PNSIV-CNV 247 (562)
Q Consensus 199 ~~------------~~~---------~~~~--~~~~~~~~~~~~~~~~~--~ad~vi~~S~~~~~~-----~~~~~-~~v 247 (562)
.. ... ++.. .........-.+.+... .++.+|++|+..++. ....+ +..
T Consensus 139 ~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~~~~i~vI~ 218 (405)
T PRK10125 139 VTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIIN 218 (405)
T ss_pred cCCCcCCCcccccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcCCCCEEEeC
Confidence 31 000 0000 00111111112222222 257899999888773 22233 334
Q ss_pred cccCCCCcCcchhhhHHhhcCCCCCccEEEEEeec--cccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHh
Q 008544 248 HGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRM--VWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKK 325 (562)
Q Consensus 248 ~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~--~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~ 325 (562)
||||++.+.+..... ....+++.+.++++|+. .+.||++.+++|+..+. ++++|+++|.|+...
T Consensus 219 NGid~~~~~~~~~~~---~~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~~~~-------- 284 (405)
T PRK10125 219 NGIDMATEAILAELP---PVRETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFSPFT-------- 284 (405)
T ss_pred CCcCccccccccccc---ccccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCCccc--------
Confidence 699964322211110 01112346789999994 36799999999998763 479999999875321
Q ss_pred cCCeeEEeCCC---CChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHH
Q 008544 326 LKLVVRVYPGR---DHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFV 399 (562)
Q Consensus 326 l~l~~~~~~~~---~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la 399 (562)
...+.+++.. .+..++|+.+|+||+||..|+||++++||||||+|||+|+.|| +|++.++ +|++++ |+++|+
T Consensus 285 -~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d~~~La 362 (405)
T PRK10125 285 -AGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTVSEEEVLQLA 362 (405)
T ss_pred -ccceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEECCCCHHHHH
Confidence 1134444433 3445889999999999999999999999999999999999998 8888764 899985 999999
Q ss_pred HHHHHHHhCCCC-CccHHHH----hcCCHHHHHHHHHHHHHh
Q 008544 400 EATLKALAEEPA-QPTDAQT----HQLSWESATERFLQVAEL 436 (562)
Q Consensus 400 ~~i~~ll~~~~~-~l~~~ar----~~~sw~~~~~~~~~~y~~ 436 (562)
+.+...+.+... .+.++++ ++|||+.++++++++|+.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~ 404 (405)
T PRK10125 363 QLSKPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQN 404 (405)
T ss_pred hccCHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 865443332211 1112222 789999999999999975
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-28 Score=256.58 Aligned_cols=260 Identities=15% Similarity=0.043 Sum_probs=180.7
Q ss_pred cCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcH--HHHhhh--h------------ch--HHHHHHHHHHHHH
Q 008544 159 DEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYL--EYVKRE--K------------ND--RLQAFLLEFVNSW 220 (562)
Q Consensus 159 ~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~--~~~~~~--~------------~~--~~~~~~~~~~~~~ 220 (562)
+.+|||++.+......+. ...+..+ .|++.++|.... +..... + .+ .+.+.+...+..+
T Consensus 105 ~~~pDv~i~~~g~~~~~~--~~~~~~~-~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~ 181 (419)
T cd03806 105 KLVPDIFIDTMGYPFTYP--LVRLLGG-CPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAF 181 (419)
T ss_pred hcCCCEEEEcCCcccHHH--HHHHhcC-CeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHH
Confidence 457999998875555333 1222221 389999993210 221110 0 01 1222222222222
Q ss_pred HHHH---hccEEEEcChhhhccCC----C--cc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHH
Q 008544 221 LARV---HCHKVIRLSAATQEYPN----S--IV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEE 290 (562)
Q Consensus 221 ~~~~---~ad~vi~~S~~~~~~~~----~--~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ 290 (562)
+.+. .||.++++|+.+++... . .+ +..+|+|.+.+.+... ......+.++|+||+.+.||++.
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~-------~~~~~~~~il~vgr~~~~K~~~~ 254 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPL-------DEKTRENQILSIAQFRPEKNHPL 254 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhccccc-------ccccCCcEEEEEEeecCCCCHHH
Confidence 2222 49999999988887321 1 22 2235777655443211 11233578999999999999999
Q ss_pred HHHHHHHHHHhcCC-----cEEEEEeCCCC------HHHHHHHHHhcCCe--eEEeCC--CCChHHHHhhcCEEEEccCC
Q 008544 291 LLGLLNIYHKELAG-----LEMDLYGNGED------FDQIQRAAKKLKLV--VRVYPG--RDHADPIFHDYKVFLNPSTT 355 (562)
Q Consensus 291 ll~a~~~l~~~~~~-----~~l~ivG~g~~------~~~l~~~~~~l~l~--~~~~~~--~~~~~~l~~~adv~v~pS~~ 355 (562)
+++|+.++.+..|+ ++|+|+|++.. .++++++++++++. +.|.+. .++..++|+.||++++||..
T Consensus 255 li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~ 334 (419)
T cd03806 255 QLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEELSTASIGLHTMWN 334 (419)
T ss_pred HHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHHHHhCeEEEECCcc
Confidence 99999999887654 99999998742 36788888888875 445554 34555999999999999999
Q ss_pred CCCcHHHHHHHHcCCcEEeeCCCC--ccccc---cCCceEeeCCHHHHHHHHHHHHhCCCC---CccHHHH---hcCCHH
Q 008544 356 DVVCTATAEALAMGKIVVCANHPS--NDFFK---QFPNCRTYDGRNGFVEATLKALAEEPA---QPTDAQT---HQLSWE 424 (562)
Q Consensus 356 E~~~~~~lEAma~G~PVI~t~~~~--~e~v~---~~~~g~~~~d~~~la~~i~~ll~~~~~---~l~~~ar---~~~sw~ 424 (562)
|+||++++||||||+|||+++.++ .+++. ++.+|++++|+++++++|.+++++++. .++++++ ++|||+
T Consensus 335 E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 335 EHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLASTAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred CCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHH
Confidence 999999999999999999999876 57887 899999999999999999999998764 3433333 789998
Q ss_pred HHHH
Q 008544 425 SATE 428 (562)
Q Consensus 425 ~~~~ 428 (562)
...+
T Consensus 415 ~f~~ 418 (419)
T cd03806 415 EFER 418 (419)
T ss_pred Hhcc
Confidence 7653
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=243.88 Aligned_cols=318 Identities=17% Similarity=0.151 Sum_probs=218.0
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||++++..+. .+|++.....++++|.+.| |+|++++......... .. . .. .. . .....
T Consensus 1 kIl~~~~~~~--~gG~~~~~~~l~~~l~~~g-~~v~v~~~~~~~~~~~--~~------~-~~--~~---~--~~~~~--- 58 (353)
T cd03811 1 KILFVIPSLG--GGGAERVLLNLANGLDKRG-YDVTLVVLRDEGDYLE--LL------P-SN--VK---L--IPVRV--- 58 (353)
T ss_pred CeEEEeeccc--CCCcchhHHHHHHHHHhcC-ceEEEEEcCCCCcccc--cc------c-cc--hh---h--hceee---
Confidence 6899998774 6888888999999999888 9999998733111000 00 0 00 00 0 00000
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhh-cCCEEEEEcCCcHHHHhhhhchHH
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAK-FRFVVGIVHTNYLEYVKREKNDRL 209 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~-~~~vi~~~h~~~~~~~~~~~~~~~ 209 (562)
... ...........+.+.+++.+||+||++.. ...++ ...+..+ ..|.+.++|+.+.........
T Consensus 59 --~~~------~~~~~~~~~~~~~~~~~~~~~dii~~~~~-~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--- 124 (353)
T cd03811 59 --LKL------KSLRDLLAILRLRRLLRKEKPDVVISHLT-TTPNV--LALLAARLGTKLIVWEHNSLSLELKRKLR--- 124 (353)
T ss_pred --eec------ccccchhHHHHHHHHHHhcCCCEEEEcCc-cchhH--HHHHHhhcCCceEEEEcCcchhhhccchh---
Confidence 000 00111112345777888889999999987 22122 1122222 248999999776543321111
Q ss_pred HHHHHHHHHHHHHHHhccEEEEcChhhhccC-------CCcc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEee
Q 008544 210 QAFLLEFVNSWLARVHCHKVIRLSAATQEYP-------NSIV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGR 281 (562)
Q Consensus 210 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~-------~~~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr 281 (562)
.. .+...... .+|.++++|+..++.. ...+ ...+|++...+.+...... ......+...++|+|+
T Consensus 125 ---~~-~~~~~~~~-~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~g~ 197 (353)
T cd03811 125 ---LL-LLIRKLYR-RADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL--ELGIPPDGPVILAVGR 197 (353)
T ss_pred ---HH-HHHHhhcc-ccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhh--hcCCCCCceEEEEEec
Confidence 00 12222222 3799999998887732 2222 3335888776654332211 2233455788999999
Q ss_pred ccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCCCChHHHHhhcCEEEEccCCCCCc
Q 008544 282 MVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGRDHADPIFHDYKVFLNPSTTDVVC 359 (562)
Q Consensus 282 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~~~~~~l~~~adv~v~pS~~E~~~ 359 (562)
+.+.||++.+++++..+..+.++++|+++|.++..+.+++.++++++. +.+.+..++..++++.+|++++||..|++|
T Consensus 198 ~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~i~ps~~e~~~ 277 (353)
T cd03811 198 LSPQKGFDTLIRAFALLRKEGPDARLVILGDGPLREELEALAKELGLADRVHFLGFQSNPYPYLKAADLFVLSSRYEGFP 277 (353)
T ss_pred chhhcChHHHHHHHHHhhhcCCCceEEEEcCCccHHHHHHHHHhcCCCccEEEecccCCHHHHHHhCCEEEeCcccCCCC
Confidence 999999999999999998888899999999999888888888888765 445677888889999999999999999999
Q ss_pred HHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHH---HHHHHHHHhCCCC
Q 008544 360 TATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGF---VEATLKALAEEPA 411 (562)
Q Consensus 360 ~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~l---a~~i~~ll~~~~~ 411 (562)
++++|||+||+|||+++.++ .|++.++.+|++++ |++++ ++++.++.+++..
T Consensus 278 ~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~ 335 (353)
T cd03811 278 NVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLDPEL 335 (353)
T ss_pred cHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCChHH
Confidence 99999999999999999998 89999999999984 78888 5555555555443
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=248.98 Aligned_cols=244 Identities=10% Similarity=0.031 Sum_probs=172.1
Q ss_pred cCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhh-hhchHHHHHHHHHHHHHHHHHhccEEEEcCh
Q 008544 157 IPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKR-EKNDRLQAFLLEFVNSWLARVHCHKVIRLSA 234 (562)
Q Consensus 157 i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~ 234 (562)
++..+||+||++++........+...++..+ |++.++|+.+...... .........+.+.+.+++.+. +|.++++|+
T Consensus 96 ~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-ad~ii~~S~ 174 (371)
T PLN02275 96 VKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKM-ADGHLCVTK 174 (371)
T ss_pred hhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhh-CCEEEECCH
Confidence 3567999999998765422111222333333 8888999753211110 011222334555566666665 899999999
Q ss_pred hhhccCCCc----cccc-cccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHH----------
Q 008544 235 ATQEYPNSI----VCNV-HGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYH---------- 299 (562)
Q Consensus 235 ~~~~~~~~~----~~~v-~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~---------- 299 (562)
.+++...+. +..+ +| +.+.|.+.... .... .+...+++++|++.+.||++.+++|+..+.
T Consensus 175 ~~~~~l~~~~g~~i~vi~n~-~~~~f~~~~~~---~~~~-~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~ 249 (371)
T PLN02275 175 AMQHELDQNWGIRATVLYDQ-PPEFFRPASLE---IRLR-PNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNES 249 (371)
T ss_pred HHHHHHHHhcCCCeEEECCC-CHHHcCcCCch---hccc-CCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccc
Confidence 987743211 2222 34 33333332211 0111 122456789999999999999999998874
Q ss_pred -------HhcCCcEEEEEeCCCCHHHHHHHHHhcCCee-EEeCC---CCChHHHHhhcCEEEEcc---CCCCCcHHHHHH
Q 008544 300 -------KELAGLEMDLYGNGEDFDQIQRAAKKLKLVV-RVYPG---RDHADPIFHDYKVFLNPS---TTDVVCTATAEA 365 (562)
Q Consensus 300 -------~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~-~~~~~---~~~~~~l~~~adv~v~pS---~~E~~~~~~lEA 365 (562)
++.|+++|+++|+|+.++++++.+++++++. .++++ .++..++|+.+|++|+|+ ..|++|++++||
T Consensus 250 ~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEA 329 (371)
T PLN02275 250 DSASGKQSLYPRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDM 329 (371)
T ss_pred cccccccccCCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHH
Confidence 2358999999999999999999999998874 44554 456668999999999863 248899999999
Q ss_pred HHcCCcEEeeCCCC-ccccccCCceEeeCCHHHHHHHHHHHH
Q 008544 366 LAMGKIVVCANHPS-NDFFKQFPNCRTYDGRNGFVEATLKAL 406 (562)
Q Consensus 366 ma~G~PVI~t~~~~-~e~v~~~~~g~~~~d~~~la~~i~~ll 406 (562)
||||+|||+++.++ .|++.++.+|++++|+++++++|.+++
T Consensus 330 mA~G~PVVa~~~gg~~eiv~~g~~G~lv~~~~~la~~i~~l~ 371 (371)
T PLN02275 330 FGCGLPVCAVSYSCIGELVKDGKNGLLFSSSSELADQLLELL 371 (371)
T ss_pred HHCCCCEEEecCCChHHHccCCCCeEEECCHHHHHHHHHHhC
Confidence 99999999999987 999999999999999999999998864
|
|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-26 Score=240.00 Aligned_cols=254 Identities=15% Similarity=0.110 Sum_probs=184.6
Q ss_pred cCCCcEEEecCCchhhhhhchHHHHhhcC-C-EEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhh
Q 008544 159 DEEADIAVLEEPEHLTWFHHGKRWKAKFR-F-VVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAAT 236 (562)
Q Consensus 159 ~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~-vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~ 236 (562)
+.++|++|++........ ...+.++.. + +|.+.|.... +...... ....+.+.+.+ .+|.++++|+..
T Consensus 125 ~~~~~v~~sy~~~~~~~~--~~~l~~~~~~~~~i~~~Hg~d~-~~~~~~~------~~~~~~~~~~~-~~d~ii~~S~~~ 194 (407)
T cd04946 125 DGQGTVFYSYWLHETAYA--LALLKKEYLRKRVISRAHGYDL-YEDRYPS------GYIPLRRYLLS-SLDAVFPCSEQG 194 (407)
T ss_pred ccCceEEEEecCchHHHH--HHHHHHhcCCceEEEEeccchh-hhhhccc------cchHHHHHHHh-cCCEEEECCHHH
Confidence 456788887665554322 233455544 3 7999995422 2211111 01112222222 279999999888
Q ss_pred hccCC-------Ccc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcC--CcE
Q 008544 237 QEYPN-------SIV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELA--GLE 306 (562)
Q Consensus 237 ~~~~~-------~~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~--~~~ 306 (562)
+++.. ..+ +..+|++...+.+. ...++.+.++++|++.+.||++.+++++..+.+..| +++
T Consensus 195 ~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~---------~~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~ 265 (407)
T cd04946 195 RNYLQKRYPAYKEKIKVSYLGVSDPGIISK---------PSKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIK 265 (407)
T ss_pred HHHHHHHCCCccccEEEEECCcccccccCC---------CCCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEE
Confidence 77422 122 22357776544321 112346789999999999999999999999988876 467
Q ss_pred EEEEeCCCCHHHHHHHHHhcCCe--eEEeCCCCCh--HHHHhh--cCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-
Q 008544 307 MDLYGNGEDFDQIQRAAKKLKLV--VRVYPGRDHA--DPIFHD--YKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS- 379 (562)
Q Consensus 307 l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~~~~--~~l~~~--adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~- 379 (562)
++++|+|++.+.+++.+++++.+ +.+.|..++. .++|+. +|+|++||..||+|++++||||||+|||+|+.||
T Consensus 266 ~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~ 345 (407)
T cd04946 266 WTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGT 345 (407)
T ss_pred EEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCc
Confidence 78899999989999998876655 4445555543 377764 7899999999999999999999999999999998
Q ss_pred ccccccCCceEeeC---CHHHHHHHHHHHHhCCCC--CccHHHH----hcCCHHHHHHHHH
Q 008544 380 NDFFKQFPNCRTYD---GRNGFVEATLKALAEEPA--QPTDAQT----HQLSWESATERFL 431 (562)
Q Consensus 380 ~e~v~~~~~g~~~~---d~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw~~~~~~~~ 431 (562)
.|++.++.+|++++ |+++++++|.++++|++. +|+++++ ++|+|+...+++.
T Consensus 346 ~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 346 PEIVDNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999998998863 789999999999998776 8888888 8999999998875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.1e-26 Score=234.18 Aligned_cols=252 Identities=14% Similarity=0.118 Sum_probs=174.9
Q ss_pred HHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcH-------HHHhhhhc--hHHHHHHHHHHHHHHHH
Q 008544 153 ITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYL-------EYVKREKN--DRLQAFLLEFVNSWLAR 223 (562)
Q Consensus 153 l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~-------~~~~~~~~--~~~~~~~~~~~~~~~~~ 223 (562)
+.+.+...++|+|++++......+ ......+.+.++|+... .+....+. ......+.+.+..+..+
T Consensus 75 ~~~~~~~~~~D~v~~~~~~~~~~~-----~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (351)
T cd03804 75 AIEQFDLSGYDLVISSSHAVAKGV-----ITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRR 149 (351)
T ss_pred HHHhccccCCCEEEEcCcHHhccc-----cCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHH
Confidence 444566778999998775333111 11222377888886421 12111111 00001122222222221
Q ss_pred H--hccEEEEcChhhhccC-----CCccccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHH
Q 008544 224 V--HCHKVIRLSAATQEYP-----NSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLN 296 (562)
Q Consensus 224 ~--~ad~vi~~S~~~~~~~-----~~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~ 296 (562)
. .+|.++++|+.+++.. .+..+..+|+|.+.+.+.. ...+.++|+|++.+.||++.+++++.
T Consensus 150 ~~~~~d~ii~~S~~~~~~~~~~~~~~~~vi~~~~d~~~~~~~~-----------~~~~~il~~G~~~~~K~~~~li~a~~ 218 (351)
T cd03804 150 SAARVDYFIANSRFVARRIKKYYGRDATVIYPPVDTDRFTPAE-----------EKEDYYLSVGRLVPYKRIDLAIEAFN 218 (351)
T ss_pred HhcCCCEEEECCHHHHHHHHHHhCCCcEEECCCCCHhhcCcCC-----------CCCCEEEEEEcCccccChHHHHHHHH
Confidence 1 4899999999887743 2222233577766554321 12457899999999999999999996
Q ss_pred HHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCC--hHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEe
Q 008544 297 IYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDH--ADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVC 374 (562)
Q Consensus 297 ~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~--~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~ 374 (562)
.+ + ++|+++|+|++.+.+++ ....++.+++..++ ..++|+.||++++||. |+||++++||||||+|||+
T Consensus 219 ~~----~-~~l~ivG~g~~~~~l~~---~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~ 289 (351)
T cd03804 219 KL----G-KRLVVIGDGPELDRLRA---KAGPNVTFLGRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIA 289 (351)
T ss_pred HC----C-CcEEEEECChhHHHHHh---hcCCCEEEecCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEE
Confidence 54 3 88999999988777766 33445777777655 5589999999999999 9999999999999999999
Q ss_pred eCCCC-ccccccCCceEee--CCHHHHHHHHHHHHhCCC-C--CccHHHHhcCCHHHHHHHH
Q 008544 375 ANHPS-NDFFKQFPNCRTY--DGRNGFVEATLKALAEEP-A--QPTDAQTHQLSWESATERF 430 (562)
Q Consensus 375 t~~~~-~e~v~~~~~g~~~--~d~~~la~~i~~ll~~~~-~--~l~~~ar~~~sw~~~~~~~ 430 (562)
++.++ .|++.++.+|+++ +|+++++++|.++++++. . .+++++ ++|+|+...+++
T Consensus 290 ~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 350 (351)
T cd03804 290 YGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNEDFDPQAIRAHA-ERFSESRFREKI 350 (351)
T ss_pred eCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcccCHHHHHHHH-HhcCHHHHHHHh
Confidence 99987 9999999999987 489999999999999884 2 333222 679999998875
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.4e-26 Score=236.32 Aligned_cols=257 Identities=17% Similarity=0.179 Sum_probs=190.6
Q ss_pred cCCCcEEEecCCchhhhhhchHHHHh-hcCCEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhh
Q 008544 159 DEEADIAVLEEPEHLTWFHHGKRWKA-KFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQ 237 (562)
Q Consensus 159 ~~~pDvV~~~~~~~~~~~~~~~~~~~-~~~~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~ 237 (562)
..++|+++++.+....+. .+.. +..+.+.++|+.............++ ...+.+...+.+ +|.+++.|+..+
T Consensus 97 ~~~~diii~~~~~~~~~~----~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~d~ii~~s~~~~ 169 (372)
T cd04949 97 DTKPDVFILDRPTLDGQA----LLNMKKAAKVVVVLHSNHVSDNNDPVHSLIN-NFYEYVFENLDK--VDGVIVATEQQK 169 (372)
T ss_pred CCCCCEEEECCccccchh----HHhccCCceEEEEEChHHhCCcccccccccc-hhhHHHHhChhh--CCEEEEccHHHH
Confidence 478999999988766431 1222 22267888996532211110011111 122222233334 699999998877
Q ss_pred ccC-----CC-cc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEE
Q 008544 238 EYP-----NS-IV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLY 310 (562)
Q Consensus 238 ~~~-----~~-~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~iv 310 (562)
+.. .. .+ ...+|++...+.+.. ........++++|++.++||++.+++++.++.++.|+++|+++
T Consensus 170 ~~l~~~~~~~~~v~~ip~g~~~~~~~~~~--------~~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~ 241 (372)
T cd04949 170 QDLQKQFGNYNPIYTIPVGSIDPLKLPAQ--------FKQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIY 241 (372)
T ss_pred HHHHHHhCCCCceEEEcccccChhhcccc--------hhhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEE
Confidence 621 11 12 233477765544321 0112256799999999999999999999999999999999999
Q ss_pred eCCCCHHHHHHHHHhcCCe--eEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCC-C-ccccccC
Q 008544 311 GNGEDFDQIQRAAKKLKLV--VRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHP-S-NDFFKQF 386 (562)
Q Consensus 311 G~g~~~~~l~~~~~~l~l~--~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~-~-~e~v~~~ 386 (562)
|.|+....++..++++++. +.+.+..++..++|+.||++|+||..|+||++++|||+||+|||+++.+ + .+++.++
T Consensus 242 G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~ 321 (372)
T cd04949 242 GYGDEEEKLKELIEELGLEDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDG 321 (372)
T ss_pred EeCchHHHHHHHHHHcCCcceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccC
Confidence 9999888888888887765 4445667788899999999999999999999999999999999999987 5 8999999
Q ss_pred CceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH---hcCCHHHHHHHH
Q 008544 387 PNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT---HQLSWESATERF 430 (562)
Q Consensus 387 ~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar---~~~sw~~~~~~~ 430 (562)
.+|++++ |+++++++|.++++++.. .|+++++ ++|+|+++++++
T Consensus 322 ~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 322 ENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred CCceEeCCCcHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 9999986 999999999999999865 7887777 899999998763
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.8e-25 Score=223.42 Aligned_cols=221 Identities=13% Similarity=0.078 Sum_probs=162.1
Q ss_pred CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhccC-------CCcc-ccccccCCCCcCcch
Q 008544 188 FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYP-------NSIV-CNVHGVNPKFLEIGE 259 (562)
Q Consensus 188 ~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~-------~~~~-~~v~GVd~~~~~~~~ 259 (562)
|+++++|+.+ ++...+..+.....+|.++++|+.+++.. .+.+ +..||||.+.|.+..
T Consensus 71 ~~v~e~~~~~--------------~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f~~~~ 136 (331)
T PHA01630 71 NIVFEVADTD--------------AISHTALYFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMFEYKP 136 (331)
T ss_pred ceEEEEEeec--------------hhhHHHHHHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHcCCCc
Confidence 7888888621 12223333341223799999998888732 1222 334799987775432
Q ss_pred hhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCee-EEeCCCCC
Q 008544 260 KKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVV-RVYPGRDH 338 (562)
Q Consensus 260 ~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~-~~~~~~~~ 338 (562)
.. .....+++++|++.++||++.+++|++.+.++.++++++++|++.....+. ++.. ......++
T Consensus 137 ~~--------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~~~l~------~~~~~~~~v~~~~ 202 (331)
T PHA01630 137 KE--------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLDPRLF------GLNGVKTPLPDDD 202 (331)
T ss_pred cc--------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccchhhc------cccceeccCCHHH
Confidence 11 122446667788899999999999999998888899999999765433221 2211 11234566
Q ss_pred hHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEee---------------------CCHH
Q 008544 339 ADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTY---------------------DGRN 396 (562)
Q Consensus 339 ~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~---------------------~d~~ 396 (562)
..++|+.||+||+||..|+||++++||||||+|||+|+.++ .|++.++.+|+++ +|.+
T Consensus 203 l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~ 282 (331)
T PHA01630 203 IYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIE 282 (331)
T ss_pred HHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCCCHH
Confidence 77999999999999999999999999999999999999998 8999998887664 2788
Q ss_pred HHHHHHHHHHhCC--CC---CccHHHH---hcCCHHHHHHHHHHHHHh
Q 008544 397 GFVEATLKALAEE--PA---QPTDAQT---HQLSWESATERFLQVAEL 436 (562)
Q Consensus 397 ~la~~i~~ll~~~--~~---~l~~~ar---~~~sw~~~~~~~~~~y~~ 436 (562)
++++++.+++.++ +. .+..+++ ++|||++++++++++|+.
T Consensus 283 ~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 283 DAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 9999999999885 22 2333333 899999999999999974
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-23 Score=209.78 Aligned_cols=221 Identities=18% Similarity=0.183 Sum_probs=158.8
Q ss_pred CCEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhccCC-----CccccccccCCCCcCcchh-
Q 008544 187 RFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYPN-----SIVCNVHGVNPKFLEIGEK- 260 (562)
Q Consensus 187 ~~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~-----~~~~~v~GVd~~~~~~~~~- 260 (562)
++.+.++|..+.. +..++++.+. +.+|++|+.+++... ..+..++|+|.+.|.+...
T Consensus 71 ~~~~tt~~g~~~~---------------~~y~~~m~~~--~~vIavS~~t~~~L~~~G~~~~i~I~~GVD~~~f~p~~~~ 133 (335)
T PHA01633 71 KYFYTTCDGIPNI---------------EIVNKYLLQD--VKFIPNSKFSAENLQEVGLQVDLPVFHGINFKIVENAEKL 133 (335)
T ss_pred CceEEeeCCcCch---------------HHHHHHHhcC--CEEEeCCHHHHHHHHHhCCCCceeeeCCCChhhcCccchh
Confidence 5788888866531 2234555664 899999988887321 1233457999988776432
Q ss_pred -hhHHhhcCCC-CCccEEEEEeeccccCCHHHHHHHHHHHHHhcCC----cEEEEEeCCCCHHHHHHHHHhcCC--eeEE
Q 008544 261 -KMEQQQNGNK-AFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAG----LEMDLYGNGEDFDQIQRAAKKLKL--VVRV 332 (562)
Q Consensus 261 -~~~~~~~~~~-~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~----~~l~ivG~g~~~~~l~~~~~~l~l--~~~~ 332 (562)
...++..+.. ++.+.++++||+.++||++.+++|+..+.++.|+ ++++++|.+ .+ +++++ .+++
T Consensus 134 ~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~----~~----~~l~l~~~V~f 205 (335)
T PHA01633 134 VPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK----QF----TQLEVPANVHF 205 (335)
T ss_pred hHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH----HH----HHcCCCCcEEE
Confidence 1222333322 3567899999999999999999999999888775 578777741 22 33333 3555
Q ss_pred eC--C---CCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-cccccc------------------CCc
Q 008544 333 YP--G---RDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQ------------------FPN 388 (562)
Q Consensus 333 ~~--~---~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~------------------~~~ 388 (562)
.+ + .++..++|+.+|+||+||..|+||++++||||||+|||+++.++ .|++.+ ...
T Consensus 206 ~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~ 285 (335)
T PHA01633 206 VAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQ 285 (335)
T ss_pred EecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCc
Confidence 54 2 23456999999999999999999999999999999999999987 665431 234
Q ss_pred eEeeC--CHHHHHHHHHHHHhCCCC-CccHHHH---hcCCHHHHHHHHHH
Q 008544 389 CRTYD--GRNGFVEATLKALAEEPA-QPTDAQT---HQLSWESATERFLQ 432 (562)
Q Consensus 389 g~~~~--d~~~la~~i~~ll~~~~~-~l~~~ar---~~~sw~~~~~~~~~ 432 (562)
||.++ |+++++++|..+++..+. ..+.+++ ++|+|+++.+++++
T Consensus 286 g~~~~~~d~~~la~ai~~~~~~~~~~~~~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 286 KWKIHKFQIEDMANAIILAFELQDREERSMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred eeeecCCCHHHHHHHHHHHHhccChhhhhHHHHHHHHhcCHHHHHHHhhC
Confidence 66654 999999999999766543 3344444 99999999998864
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=203.21 Aligned_cols=331 Identities=14% Similarity=0.087 Sum_probs=206.8
Q ss_pred CeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccC-CCceeCCchhhHHHHHHHhhhccCCC
Q 008544 50 QHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYP-GNITFASPKEQEAYVRWWLEDRTGFT 128 (562)
Q Consensus 50 ~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p-~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (562)
|||+|++... +|.......++++|.++| |+|++++..... ... .+. .++.+.. ...
T Consensus 2 ~~i~i~~~g~----gG~~~~~~~la~~L~~~g-~ev~vv~~~~~~-~~~-~~~~~g~~~~~---------------~~~- 58 (357)
T PRK00726 2 KKILLAGGGT----GGHVFPALALAEELKKRG-WEVLYLGTARGM-EAR-LVPKAGIEFHF---------------IPS- 58 (357)
T ss_pred cEEEEEcCcc----hHhhhHHHHHHHHHHhCC-CEEEEEECCCch-hhh-ccccCCCcEEE---------------Eec-
Confidence 6888886533 565555679999999998 999999873210 000 011 0111100 000
Q ss_pred CCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhch
Q 008544 129 STFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKND 207 (562)
Q Consensus 129 ~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~ 207 (562)
+...-.....+..........+..+.+++++.+||+||++++... +. +....+..+ |++.+.|+.+..
T Consensus 59 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~ik~~~pDvv~~~~~~~~-~~--~~~~~~~~~~p~v~~~~~~~~~-------- 127 (357)
T PRK00726 59 GGLRRKGSLANLKAPFKLLKGVLQARKILKRFKPDVVVGFGGYVS-GP--GGLAARLLGIPLVIHEQNAVPG-------- 127 (357)
T ss_pred cCcCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcch-hH--HHHHHHHcCCCEEEEcCCCCcc--------
Confidence 000000000000001111223456778888999999999985443 22 222233333 777655532211
Q ss_pred HHHHHHHHHHHHHHHHHhccEEEEcChhhhc-cCCCcc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeecccc
Q 008544 208 RLQAFLLEFVNSWLARVHCHKVIRLSAATQE-YPNSIV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWS 285 (562)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~-~~~~~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~ 285 (562)
...+++.+. +|.+++.++.... .+...+ +..||++.+.+.+.. .....+.+++.++++++|+....
T Consensus 128 --------~~~r~~~~~-~d~ii~~~~~~~~~~~~~~i~vi~n~v~~~~~~~~~---~~~~~~~~~~~~~i~~~gg~~~~ 195 (357)
T PRK00726 128 --------LANKLLARF-AKKVATAFPGAFPEFFKPKAVVTGNPVREEILALAA---PPARLAGREGKPTLLVVGGSQGA 195 (357)
T ss_pred --------HHHHHHHHH-hchheECchhhhhccCCCCEEEECCCCChHhhcccc---hhhhccCCCCCeEEEEECCcHhH
Confidence 123334443 7999988864421 222233 334688876654322 12233445557788899988888
Q ss_pred CCHHHHH-HHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHH
Q 008544 286 KGYEELL-GLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAE 364 (562)
Q Consensus 286 Kg~~~ll-~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lE 364 (562)
|+...++ +|+.++.+. + ..++++|.|+. +.+.+..+ +++++.+.+..++..++|+.+|+++.+| .+.+++|
T Consensus 196 ~~~~~~l~~a~~~~~~~-~-~~~~~~G~g~~-~~~~~~~~-~~~~v~~~g~~~~~~~~~~~~d~~i~~~----g~~~~~E 267 (357)
T PRK00726 196 RVLNEAVPEALALLPEA-L-QVIHQTGKGDL-EEVRAAYA-AGINAEVVPFIDDMAAAYAAADLVICRA----GASTVAE 267 (357)
T ss_pred HHHHHHHHHHHHHhhhC-c-EEEEEcCCCcH-HHHHHHhh-cCCcEEEeehHhhHHHHHHhCCEEEECC----CHHHHHH
Confidence 8876555 888887654 3 56778899864 45555556 7777666676778889999999999876 2689999
Q ss_pred HHHcCCcEEeeCCCC---------ccccccCCceEeeC--C--HHHHHHHHHHHHhCCCC--CccHHHH---hcCCHHHH
Q 008544 365 ALAMGKIVVCANHPS---------NDFFKQFPNCRTYD--G--RNGFVEATLKALAEEPA--QPTDAQT---HQLSWESA 426 (562)
Q Consensus 365 Ama~G~PVI~t~~~~---------~e~v~~~~~g~~~~--d--~~~la~~i~~ll~~~~~--~l~~~ar---~~~sw~~~ 426 (562)
||+||+|||++..++ .+.+.+..+|++++ | +++++++|.++++|++. .|+++++ +.++-+.+
T Consensus 268 a~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (357)
T PRK00726 268 LAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARALGKPDAAERL 347 (357)
T ss_pred HHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCcCHHHHH
Confidence 999999999997642 24677778888873 5 99999999999999876 7888777 56777777
Q ss_pred HHHHHHHH
Q 008544 427 TERFLQVA 434 (562)
Q Consensus 427 ~~~~~~~y 434 (562)
++.+.+..
T Consensus 348 ~~~~~~~~ 355 (357)
T PRK00726 348 ADLIEELA 355 (357)
T ss_pred HHHHHHHh
Confidence 77776654
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-21 Score=201.15 Aligned_cols=239 Identities=15% Similarity=0.139 Sum_probs=165.9
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccE
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHK 228 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 228 (562)
...+.+++++.+||+||++++... +. +...++..+ |++...|+.+.. ...+++.+. +|.
T Consensus 78 ~~~~~~~i~~~~pDvI~~~~~~~~-~~--~~~~a~~~~~p~v~~~~~~~~~----------------~~~~~~~~~-~~~ 137 (350)
T cd03785 78 VLQARKILKKFKPDVVVGFGGYVS-GP--VGLAAKLLGIPLVIHEQNAVPG----------------LANRLLARF-ADR 137 (350)
T ss_pred HHHHHHHHHhcCCCEEEECCCCcc-hH--HHHHHHHhCCCEEEEcCCCCcc----------------HHHHHHHHh-hCE
Confidence 345677788899999999986543 22 222334433 666544432211 112333343 799
Q ss_pred EEEcChhhhcc-CCCcc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHH-HHHHHHHHHHhcCCc
Q 008544 229 VIRLSAATQEY-PNSIV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEE-LLGLLNIYHKELAGL 305 (562)
Q Consensus 229 vi~~S~~~~~~-~~~~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~-ll~a~~~l~~~~~~~ 305 (562)
++++|+..++. +...+ ...+|++.+.+.+... +...+.+++.++++++|+....|+... +++++..+.+ +++
T Consensus 138 vi~~s~~~~~~~~~~~~~~i~n~v~~~~~~~~~~---~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~ 212 (350)
T cd03785 138 VALSFPETAKYFPKDKAVVTGNPVREEILALDRE---RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRL 212 (350)
T ss_pred EEEcchhhhhcCCCCcEEEECCCCchHHhhhhhh---HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCe
Confidence 99999888874 33333 3346888776553221 444566666778888887777777765 4588877763 356
Q ss_pred E-EEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----
Q 008544 306 E-MDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS----- 379 (562)
Q Consensus 306 ~-l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~----- 379 (562)
+ ++++|.| +.+++++.+++++.++.+.+..++..++|+.||++|.+|- +++++|||++|+|||+++.++
T Consensus 213 ~~~~i~G~g-~~~~l~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~v~~sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~ 287 (350)
T cd03785 213 QVIHQTGKG-DLEEVKKAYEELGVNYEVFPFIDDMAAAYAAADLVISRAG----ASTVAELAALGLPAILIPLPYAADDH 287 (350)
T ss_pred EEEEEcCCc-cHHHHHHHHhccCCCeEEeehhhhHHHHHHhcCEEEECCC----HhHHHHHHHhCCCEEEeecCCCCCCc
Confidence 6 4577887 6677888877765456677777788899999999998762 689999999999999987542
Q ss_pred ----ccccccCCceEeeC----CHHHHHHHHHHHHhCCCC--CccHHHH
Q 008544 380 ----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPA--QPTDAQT 418 (562)
Q Consensus 380 ----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~--~l~~~ar 418 (562)
.+.+.+..+|++++ |+++++++|.+++++++. +|+++++
T Consensus 288 ~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~ 336 (350)
T cd03785 288 QTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAAR 336 (350)
T ss_pred HHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 35677778888874 799999999999987664 6777776
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=204.60 Aligned_cols=341 Identities=12% Similarity=0.075 Sum_probs=207.5
Q ss_pred CeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHH-----Hhhhc
Q 008544 50 QHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRW-----WLEDR 124 (562)
Q Consensus 50 ~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~-----~~~~~ 124 (562)
+||+|+|..+ .+|.......+++.|.++| |+|.++++.+... .| .+ .......|... ++-..
T Consensus 5 ~rili~t~~~---G~GH~~~a~al~~~l~~~g-~~~~~~~d~~~~~-----~~-~~---~~~~~~~y~~~~~~~~~~~~~ 71 (380)
T PRK13609 5 PKVLILTAHY---GNGHVQVAKTLEQTFRQKG-IKDVIVCDLFGES-----HP-VI---TEITKYLYLKSYTIGKELYRL 71 (380)
T ss_pred CeEEEEEcCC---CchHHHHHHHHHHHHHhcC-CCcEEEEEhHHhc-----ch-HH---HHHHHHHHHHHHHHhHHHHHH
Confidence 7999999887 3455555667889999998 8877776633110 11 00 00000001000 00000
Q ss_pred cCCCCCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhh
Q 008544 125 TGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKR 203 (562)
Q Consensus 125 ~~~~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~ 203 (562)
..... ..+ +..+ ............+.+++++.+||+||++.+... +. ........+ |++..++ ++...
T Consensus 72 ~~~~~-~~~--~~~~-~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~--~~-~~~~~~~~~ip~~~~~t-d~~~~--- 140 (380)
T PRK13609 72 FYYGV-EKI--YDKK-IFSWYANFGRKRLKLLLQAEKPDIVINTFPIIA--VP-ELKKQTGISIPTYNVLT-DFCLH--- 140 (380)
T ss_pred HHhcc-Ccc--cchH-HHHHHHHHHHHHHHHHHHHhCcCEEEEcChHHH--HH-HHHHhcCCCCCeEEEeC-CCCCC---
Confidence 00000 000 0000 000111112456888999999999999877543 21 111122223 6654333 32110
Q ss_pred hhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhccC------CCccccccccCC--CCcCcchhhhHHhhcCCCCCccE
Q 008544 204 EKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYP------NSIVCNVHGVNP--KFLEIGEKKMEQQQNGNKAFTKG 275 (562)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~------~~~~~~v~GVd~--~~~~~~~~~~~~~~~~~~~~~~~ 275 (562)
..|+.+ .+|.+++.|+..++.. .+.+. +.|++. .+..+......+...+++++.++
T Consensus 141 --------------~~~~~~-~ad~i~~~s~~~~~~l~~~gi~~~ki~-v~G~p~~~~f~~~~~~~~~~~~~~l~~~~~~ 204 (380)
T PRK13609 141 --------------KIWVHR-EVDRYFVATDHVKKVLVDIGVPPEQVV-ETGIPIRSSFELKINPDIIYNKYQLCPNKKI 204 (380)
T ss_pred --------------cccccC-CCCEEEECCHHHHHHHHHcCCChhHEE-EECcccChHHcCcCCHHHHHHHcCCCCCCcE
Confidence 112333 3799999998887742 22222 234443 22222222234455666655554
Q ss_pred -EEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeC-CC-CHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEc
Q 008544 276 -AYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGN-GE-DFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNP 352 (562)
Q Consensus 276 -il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~-g~-~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~p 352 (562)
+++.|+....|+++.+++++.+ .++++++++|+ ++ ..+.+++.++.++.++.+++..++..++|+.||++|.
T Consensus 205 il~~~G~~~~~k~~~~li~~l~~----~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~~v~- 279 (380)
T PRK13609 205 LLIMAGAHGVLGNVKELCQSLMS----VPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELFRVTSCMIT- 279 (380)
T ss_pred EEEEcCCCCCCcCHHHHHHHHhh----CCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhHHHHHHhccEEEe-
Confidence 5566888888999999988742 36899988754 22 3577777777666557778777788899999999884
Q ss_pred cCCCCCcHHHHHHHHcCCcEEeeC-CCCc-----cccccCCceEeeCCHHHHHHHHHHHHhCCCC--CccHHHH---hcC
Q 008544 353 STTDVVCTATAEALAMGKIVVCAN-HPSN-----DFFKQFPNCRTYDGRNGFVEATLKALAEEPA--QPTDAQT---HQL 421 (562)
Q Consensus 353 S~~E~~~~~~lEAma~G~PVI~t~-~~~~-----e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~--~l~~~ar---~~~ 421 (562)
++.|++++|||+||+|||+++ .++. +++.+...++...|+++++++|.++++|++. +|+++++ ..+
T Consensus 280 ---~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~ 356 (380)
T PRK13609 280 ---KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPE 356 (380)
T ss_pred ---CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCc
Confidence 456899999999999999986 4442 2444444555567999999999999998775 7877776 668
Q ss_pred CHHHHHHHHHHHHHhcC
Q 008544 422 SWESATERFLQVAELVG 438 (562)
Q Consensus 422 sw~~~~~~~~~~y~~~~ 438 (562)
+++.+++.+++.++...
T Consensus 357 s~~~i~~~i~~~~~~~~ 373 (380)
T PRK13609 357 PADHIVDDILAENHVEP 373 (380)
T ss_pred hHHHHHHHHHHhhhhhh
Confidence 99999999998876554
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.5e-21 Score=199.75 Aligned_cols=281 Identities=14% Similarity=0.123 Sum_probs=171.6
Q ss_pred hHHhhcCcCCCcEEEecCCchhhhhhchHHHHh-h-cC-CEEEEEcCCcHHHHhhhhchHH----H-----------HHH
Q 008544 152 DITEIIPDEEADIAVLEEPEHLTWFHHGKRWKA-K-FR-FVVGIVHTNYLEYVKREKNDRL----Q-----------AFL 213 (562)
Q Consensus 152 ~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~-~-~~-~vi~~~h~~~~~~~~~~~~~~~----~-----------~~~ 213 (562)
.+.+.+...++||+|+|+.... + +....+ . .. |.|.|+|.....-.-..+...+ . ...
T Consensus 139 ~~~~~~~~~~~dViH~HeWm~g--~--a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~ 214 (590)
T cd03793 139 EFAEQFDDEPAVVAHFHEWQAG--V--GLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIY 214 (590)
T ss_pred HHHhhccCCCCeEEEEcchhHh--H--HHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccch
Confidence 3444434467999999987655 2 222333 2 22 7999999552111000000000 0 001
Q ss_pred HHH-HHHHHHHHhccEEEEcChhhhc----c---CCCccccccccCCCCcCcchhh-----------------hHHhhcC
Q 008544 214 LEF-VNSWLARVHCHKVIRLSAATQE----Y---PNSIVCNVHGVNPKFLEIGEKK-----------------MEQQQNG 268 (562)
Q Consensus 214 ~~~-~~~~~~~~~ad~vi~~S~~~~~----~---~~~~~~~v~GVd~~~~~~~~~~-----------------~~~~~~~ 268 (562)
.+. +.+.... .||.++++|+.++. + +.. .+..||+|++.|.+.... ......+
T Consensus 215 ~r~~iE~~aa~-~Ad~fttVS~it~~E~~~Ll~~~pd-~ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~ 292 (590)
T cd03793 215 HRYCIERAAAH-CAHVFTTVSEITAYEAEHLLKRKPD-VVLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYD 292 (590)
T ss_pred HHHHHHHHHHh-hCCEEEECChHHHHHHHHHhCCCCC-EEeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcC
Confidence 111 2333333 49999999988877 2 222 356689999888654311 0122245
Q ss_pred CCCCccEEEE-Eeeccc-cCCHHHHHHHHHHHHHh----cCC---cEEEEEeCCCC------------HHHHHHHH----
Q 008544 269 NKAFTKGAYY-IGRMVW-SKGYEELLGLLNIYHKE----LAG---LEMDLYGNGED------------FDQIQRAA---- 323 (562)
Q Consensus 269 ~~~~~~~il~-vGr~~~-~Kg~~~ll~a~~~l~~~----~~~---~~l~ivG~g~~------------~~~l~~~~---- 323 (562)
.++++++++| +||+.. .||++.+|+|++++... ..+ +-|+++-.+-. .+++++.+
T Consensus 293 ~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~ 372 (590)
T cd03793 293 FDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVK 372 (590)
T ss_pred CCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHH
Confidence 5556677777 799998 99999999999999663 223 23333322200 11111111
Q ss_pred ---------------------------------------------------------------HhcCC------eeEE-e
Q 008544 324 ---------------------------------------------------------------KKLKL------VVRV-Y 333 (562)
Q Consensus 324 ---------------------------------------------------------------~~l~l------~~~~-~ 333 (562)
+++++ .+.+ |
T Consensus 373 ~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif 452 (590)
T cd03793 373 EKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVF 452 (590)
T ss_pred HHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEE
Confidence 11111 1222 2
Q ss_pred -CC---------CCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccC--CceEee----
Q 008544 334 -PG---------RDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQF--PNCRTY---- 392 (562)
Q Consensus 334 -~~---------~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~--~~g~~~---- 392 (562)
+. -.+..++++.||++|+||.+|+||++++||||||+|||+|+.+| .|.+.++ .++++.
T Consensus 453 ~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~ 532 (590)
T cd03793 453 HPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRF 532 (590)
T ss_pred cccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCc
Confidence 11 12345899999999999999999999999999999999999976 3455444 234444
Q ss_pred ----CCHHHHHHHHHHHHhCCCC-CccHHH-----HhcCCHHHHHHHHHHHHHhcC
Q 008544 393 ----DGRNGFVEATLKALAEEPA-QPTDAQ-----THQLSWESATERFLQVAELVG 438 (562)
Q Consensus 393 ----~d~~~la~~i~~ll~~~~~-~l~~~a-----r~~~sw~~~~~~~~~~y~~~~ 438 (562)
++.++++++|.++++.+.. .+.++. .+.|+|++.++.|.++|+.+.
T Consensus 533 ~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al 588 (590)
T cd03793 533 KSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLAL 588 (590)
T ss_pred cchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 2677889999998855432 232221 188999999999999999886
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.2e-21 Score=196.83 Aligned_cols=238 Identities=13% Similarity=0.091 Sum_probs=162.7
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccE
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHK 228 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 228 (562)
+..+.+++++.+||+||++.+... +. +....+..+ |++...+.... ....+++.+. +|.
T Consensus 79 ~~~l~~~i~~~~pDvVi~~~~~~~-~~--~~~~~~~~~~p~v~~~~~~~~----------------~~~~~~~~~~-~d~ 138 (348)
T TIGR01133 79 VFQARRILKKFKPDAVIGFGGYVS-GP--AGLAAKLLGIPLFHHEQNAVP----------------GLTNKLLSRF-AKK 138 (348)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccc-HH--HHHHHHHcCCCEEEECCCCCc----------------cHHHHHHHHH-hCe
Confidence 456778889999999999976543 22 222233333 66533221111 0123444454 799
Q ss_pred EEEcChhhhccCCCccccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHH-HHHHHHHHHHhcCCcEE
Q 008544 229 VIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEE-LLGLLNIYHKELAGLEM 307 (562)
Q Consensus 229 vi~~S~~~~~~~~~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~-ll~a~~~l~~~~~~~~l 307 (562)
++++|+..+++... ....+|++..++.+... ....+.+++.++++++|+....|+... +++++..+.+. ++++
T Consensus 139 ii~~~~~~~~~~~~-~~i~n~v~~~~~~~~~~---~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~ 212 (348)
T TIGR01133 139 VLISFPGAKDHFEA-VLVGNPVRQEIRSLPVP---RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQI 212 (348)
T ss_pred eEECchhHhhcCCc-eEEcCCcCHHHhcccch---hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEE
Confidence 99999998876532 33446777655443211 223455666788999998777888655 55888877653 5666
Q ss_pred EEEeCCCCHHHHHHHHHhcCCeeEE-eCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-------
Q 008544 308 DLYGNGEDFDQIQRAAKKLKLVVRV-YPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS------- 379 (562)
Q Consensus 308 ~ivG~g~~~~~l~~~~~~l~l~~~~-~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~------- 379 (562)
++++++.+.+.+++.++++++...+ +. ..+..++|+.||++|.+| + +++++|||++|+|+|+++.++
T Consensus 213 ~~~~g~~~~~~l~~~~~~~~l~~~v~~~-~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~ 287 (348)
T TIGR01133 213 VHQTGKNDLEKVKNVYQELGIEAIVTFI-DENMAAAYAAADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYY 287 (348)
T ss_pred EEECCcchHHHHHHHHhhCCceEEecCc-ccCHHHHHHhCCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhh
Confidence 4444333457888888888875444 44 337889999999999875 2 789999999999999998753
Q ss_pred -ccccccCCceEeeC----CHHHHHHHHHHHHhCCCC--CccHHHH
Q 008544 380 -NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPA--QPTDAQT 418 (562)
Q Consensus 380 -~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~--~l~~~ar 418 (562)
.+++.++.+|++++ ++++++++|.++++|++. +|+++++
T Consensus 288 ~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~ 333 (348)
T TIGR01133 288 NAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAAR 333 (348)
T ss_pred HHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 24788888999874 499999999999988765 6777776
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=198.22 Aligned_cols=378 Identities=16% Similarity=0.130 Sum_probs=233.3
Q ss_pred CeEEEEecccCCC--cccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCC----ceeC----Cchh----hHH
Q 008544 50 QHIAIFTTASLPW--LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGN----ITFA----SPKE----QEA 115 (562)
Q Consensus 50 ~rI~ivt~~~~P~--~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~----i~~~----~~~~----~~~ 115 (562)
|||+.++....|. .||-+-....+.++|+++| ++|+|+.|.+...... +.+. .++. .... .+.
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g-~~v~v~lP~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRG-VDVRVLLPSYPKVQKE--WRDLLKVVGKFGVLKGGRAQLFIVKEY 77 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcC-CeEEEEcCCchhhhhh--hccccceeeEeeeeecccceEEEEEee
Confidence 6888899777784 5788888899999999998 9999999976421111 1110 0000 0000 000
Q ss_pred H----HHHHhhh-ccCCCC-CcccccccccchhccchhhhHHhHHhhcCc----CCCcEEEecCCchhhhhhchHHHHhh
Q 008544 116 Y----VRWWLED-RTGFTS-TFDTRFYPGKFAADKKSILAVGDITEIIPD----EEADIAVLEEPEHLTWFHHGKRWKAK 185 (562)
Q Consensus 116 ~----~~~~~~~-~~~~~~-~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~----~~pDvV~~~~~~~~~~~~~~~~~~~~ 185 (562)
. +..++.. ...+.. +-....+.... .+...-.......+.. ..|||||+|+.... +. ...++..
T Consensus 78 ~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~---~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~-L~--~~~lk~~ 151 (487)
T COG0297 78 GKDGGVDLYLIDNPALFKRPDSTLYGYYDNA---ERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTG-LL--PAYLKQR 151 (487)
T ss_pred cccCCCcEEEecChhhcCccccccCCCCcHH---HHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHH-HH--HHHHhhc
Confidence 0 0000000 000000 00011111110 0100001111112211 57999999997655 22 2334443
Q ss_pred ---c-C-CEEEEEcCC-----cH-HHHhhhhchHHHHH--------HHHHHHHHHHHHhccEEEEcChhhhc-cC-----
Q 008544 186 ---F-R-FVVGIVHTN-----YL-EYVKREKNDRLQAF--------LLEFVNSWLARVHCHKVIRLSAATQE-YP----- 240 (562)
Q Consensus 186 ---~-~-~vi~~~h~~-----~~-~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ad~vi~~S~~~~~-~~----- 240 (562)
. . |.|+|+|.. +. .+....+.....-. -...+...+. ++|.|.++|....+ +.
T Consensus 152 ~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~--~ad~vttVSptYa~Ei~t~~~g 229 (487)
T COG0297 152 YRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLY--YADAVTTVSPTYAGEIYTPEYG 229 (487)
T ss_pred ccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhhe--eccEEEEECHHHHHhhcccccc
Confidence 1 2 899999954 11 11111111110000 0011111111 58999999966655 11
Q ss_pred -----------CCccccccccCCCCcCcchhh-------------------hHHhhcCCC--CCccEEEEEeeccccCCH
Q 008544 241 -----------NSIVCNVHGVNPKFLEIGEKK-------------------MEQQQNGNK--AFTKGAYYIGRMVWSKGY 288 (562)
Q Consensus 241 -----------~~~~~~v~GVd~~~~~~~~~~-------------------~~~~~~~~~--~~~~~il~vGr~~~~Kg~ 288 (562)
.+...+.||+|....+|.... ......+++ .+.+.+.++||+.++||+
T Consensus 230 ~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~ 309 (487)
T COG0297 230 EGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGL 309 (487)
T ss_pred ccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccch
Confidence 111223468888766554332 111224554 357899999999999999
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEeCCCC--HHHHHHHHHhcCCeeEEeCCCCChH--HHHhhcCEEEEccCCCCCcHHHHH
Q 008544 289 EELLGLLNIYHKELAGLEMDLYGNGED--FDQIQRAAKKLKLVVRVYPGRDHAD--PIFHDYKVFLNPSTTDVVCTATAE 364 (562)
Q Consensus 289 ~~ll~a~~~l~~~~~~~~l~ivG~g~~--~~~l~~~~~~l~l~~~~~~~~~~~~--~l~~~adv~v~pS~~E~~~~~~lE 364 (562)
+.+++++..+.+.. +++++.|.|+. .+.+..+++.+...+.+..++++.- .+++.+|++++||++|++|++-++
T Consensus 310 dl~~~~i~~~l~~~--~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~ 387 (487)
T COG0297 310 DLLLEAIDELLEQG--WQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLY 387 (487)
T ss_pred hHHHHHHHHHHHhC--ceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHH
Confidence 99999999998874 99999999943 4777888888776666656655544 899999999999999999999999
Q ss_pred HHHcCCcEEeeCCCC-cccccc--------CCceEeeC--CHHHHHHHHHHHHhCCCC------CccHHHH-hcCCHHHH
Q 008544 365 ALAMGKIVVCANHPS-NDFFKQ--------FPNCRTYD--GRNGFVEATLKALAEEPA------QPTDAQT-HQLSWESA 426 (562)
Q Consensus 365 Ama~G~PVI~t~~~~-~e~v~~--------~~~g~~~~--d~~~la~~i~~ll~~~~~------~l~~~ar-~~~sw~~~ 426 (562)
||..|+++|+...|| .+.|.+ ..+|+++. |+++++.+|..++.-... .+..++. ..|+|+..
T Consensus 388 amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~~d~sw~~s 467 (487)
T COG0297 388 AMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMGADFSWDLS 467 (487)
T ss_pred HHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcccccCchhH
Confidence 999999999999998 776654 57899873 999999999988753332 2222222 79999999
Q ss_pred HHHHHHHHHhcCcc
Q 008544 427 TERFLQVAELVGDV 440 (562)
Q Consensus 427 ~~~~~~~y~~~~~~ 440 (562)
++++.+.|+.....
T Consensus 468 a~~y~~lY~~~~~~ 481 (487)
T COG0297 468 AKEYVELYKPLLSK 481 (487)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999988743
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.9e-20 Score=178.81 Aligned_cols=222 Identities=18% Similarity=0.158 Sum_probs=164.1
Q ss_pred EEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCCc
Q 008544 52 IAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTSTF 131 (562)
Q Consensus 52 I~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (562)
|++++..+.|..+|.+.....+++.|.++| |+|++++. .
T Consensus 1 i~~i~~~~~~~~~G~~~~~~~l~~~L~~~g-~~v~v~~~--------------------~-------------------- 39 (229)
T cd01635 1 ILLVSTPLLPGGGGVELVLLDLAKALARRG-HEVEVVAL--------------------L-------------------- 39 (229)
T ss_pred CeeeccccCCCCCCchhHHHHHHHHHHHcC-CeEEEEEe--------------------c--------------------
Confidence 577888888878898999999999999997 99999951 0
Q ss_pred ccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHH
Q 008544 132 DTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQ 210 (562)
Q Consensus 132 ~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~ 210 (562)
...+.+.+++.+||+||++++....+.. ..+....+ |++.+.|+.+.........
T Consensus 40 ------------------~~~~~~~~~~~~~D~i~~~~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~---- 95 (229)
T cd01635 40 ------------------LLLLLRILRGFKPDVVHAHGYYPAPLAL--LLAARLLGIPLVLTVHGVNRSLLEGVPL---- 95 (229)
T ss_pred ------------------hHHHHHHHhhcCCCEEEEcCCCcHHHHH--HHHHhhCCCCEEEEEcCccHhhcccCcH----
Confidence 0013445556789999999987774431 12333333 8999999876654322111
Q ss_pred HHHHHHHHHHHHHHhccEEEEcChhhhccCCCccccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHH
Q 008544 211 AFLLEFVNSWLARVHCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEE 290 (562)
Q Consensus 211 ~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ 290 (562)
+ +....... ++.. |+|++.++||++.
T Consensus 96 ----~-~~~~~~~~-~~~~------------------------------------------------~~g~~~~~k~~~~ 121 (229)
T cd01635 96 ----S-LLALSIGL-ADKV------------------------------------------------FVGRLAPEKGLDD 121 (229)
T ss_pred ----H-HHHHHHhh-cceE------------------------------------------------EEEeecccCCHHH
Confidence 0 11111111 2222 9999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCC--eeEEeCCC---CChHHHHhhcCEEEEccCCCCCcHHHHHH
Q 008544 291 LLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKL--VVRVYPGR---DHADPIFHDYKVFLNPSTTDVVCTATAEA 365 (562)
Q Consensus 291 ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l--~~~~~~~~---~~~~~l~~~adv~v~pS~~E~~~~~~lEA 365 (562)
+++++..+.++.++++++++|.+++....+..+.+++. ++.+++.. +....+++.||++++||..|++|++++||
T Consensus 122 ~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Ea 201 (229)
T cd01635 122 LIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEA 201 (229)
T ss_pred HHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHH
Confidence 99999999988899999999998887766654555444 35556663 33335666699999999999999999999
Q ss_pred HHcCCcEEeeCCCC-ccccccCCceEee
Q 008544 366 LAMGKIVVCANHPS-NDFFKQFPNCRTY 392 (562)
Q Consensus 366 ma~G~PVI~t~~~~-~e~v~~~~~g~~~ 392 (562)
|+||+|||+|+.++ .|++.++.+|+++
T Consensus 202 m~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 202 MACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 99999999999997 8889888888863
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=200.50 Aligned_cols=272 Identities=13% Similarity=0.013 Sum_probs=175.2
Q ss_pred hHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEE
Q 008544 152 DITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVI 230 (562)
Q Consensus 152 ~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 230 (562)
.+.+++++.+||++|+++......+ ...+++.+ |++.+-|.........+ .....+.+++.+. +|.|+
T Consensus 115 ~~~~~l~~~~Pd~v~~~~~~~~~~~---l~~~~~~~ip~vl~~~~~~~~s~~~~-------~~~~~~~r~~~~~-~d~ii 183 (425)
T PRK05749 115 AVRRFLRFWRPKLVIIMETELWPNL---IAELKRRGIPLVLANARLSERSFKRY-------QKFKRFYRLLFKN-IDLVL 183 (425)
T ss_pred HHHHHHHhhCCCEEEEEecchhHHH---HHHHHHCCCCEEEEeccCChhhHHHH-------HHHHHHHHHHHHh-CCEEE
Confidence 3677889999999998865432111 12233333 76655443322111110 1122233333333 69999
Q ss_pred EcChhhhccCCCc-----cccccccCCCCcC-cch---hhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHh
Q 008544 231 RLSAATQEYPNSI-----VCNVHGVNPKFLE-IGE---KKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKE 301 (562)
Q Consensus 231 ~~S~~~~~~~~~~-----~~~v~GVd~~~~~-~~~---~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~ 301 (562)
++|+..++...+. +..+.+++.+... +.. ....+...+ ++.++++++|+ ..|+.+.+++|+.++.++
T Consensus 184 ~~S~~~~~~l~~~g~~~~i~vi~n~~~d~~~~~~~~~~~~~~r~~~~--~~~~vil~~~~--~~~~~~~ll~A~~~l~~~ 259 (425)
T PRK05749 184 AQSEEDAERFLALGAKNEVTVTGNLKFDIEVPPELAARAATLRRQLA--PNRPVWIAAST--HEGEEELVLDAHRALLKQ 259 (425)
T ss_pred ECCHHHHHHHHHcCCCCCcEecccccccCCCChhhHHHHHHHHHHhc--CCCcEEEEeCC--CchHHHHHHHHHHHHHHh
Confidence 9999888742211 2222222222211 111 111122232 34667788876 468899999999999888
Q ss_pred cCCcEEEEEeCCCCH-HHHHHHHHhcCCeeEEe-C--------------CCCChHHHHhhcCEEEE-ccCCCCCcHHHHH
Q 008544 302 LAGLEMDLYGNGEDF-DQIQRAAKKLKLVVRVY-P--------------GRDHADPIFHDYKVFLN-PSTTDVVCTATAE 364 (562)
Q Consensus 302 ~~~~~l~ivG~g~~~-~~l~~~~~~l~l~~~~~-~--------------~~~~~~~l~~~adv~v~-pS~~E~~~~~~lE 364 (562)
.|+++|+|+|+|+++ +++++.++++++....+ + ...++.++|+.||+++. +|..|++|.+++|
T Consensus 260 ~~~~~liivG~g~~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S~~e~~g~~~lE 339 (425)
T PRK05749 260 FPNLLLILVPRHPERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVGGSLVKRGGHNPLE 339 (425)
T ss_pred CCCcEEEEcCCChhhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEECCCcCCCCCCCHHH
Confidence 899999999999886 78999999988763222 2 12356799999998555 6888999999999
Q ss_pred HHHcCCcEEeeCCC-C-ccccccC-CceEe--eCCHHHHHHHHHHHHhCCCC--CccHHHHhcC-CHHHHHHHHHHHHHh
Q 008544 365 ALAMGKIVVCANHP-S-NDFFKQF-PNCRT--YDGRNGFVEATLKALAEEPA--QPTDAQTHQL-SWESATERFLQVAEL 436 (562)
Q Consensus 365 Ama~G~PVI~t~~~-~-~e~v~~~-~~g~~--~~d~~~la~~i~~ll~~~~~--~l~~~ar~~~-sw~~~~~~~~~~y~~ 436 (562)
|||||+|||+++.. + .++.+.. .+|++ ++|+++++++|.++++|++. +|++++++.. +....++++++.++.
T Consensus 340 Ama~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~ 419 (425)
T PRK05749 340 PAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQNQGALQRTLQLLEP 419 (425)
T ss_pred HHHhCCCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhCccHHHHHHHHHHH
Confidence 99999999998764 3 4544331 23443 57999999999999998876 8888887222 124777788887765
Q ss_pred cC
Q 008544 437 VG 438 (562)
Q Consensus 437 ~~ 438 (562)
..
T Consensus 420 ~l 421 (425)
T PRK05749 420 YL 421 (425)
T ss_pred hc
Confidence 43
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-21 Score=207.91 Aligned_cols=260 Identities=11% Similarity=0.056 Sum_probs=171.0
Q ss_pred CCcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhh-h
Q 008544 161 EADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAAT-Q 237 (562)
Q Consensus 161 ~pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~-~ 237 (562)
..|+|++|.+..+ .+ +..+.++.. ++...+|..++.+........ .+.+...+.. ||.|...+... +
T Consensus 131 ~~d~iwihDyhl~-ll--p~~lr~~~~~~~i~~f~HipfP~~e~~~~lp~-----~~~ll~~~l~--~D~igF~t~~~~~ 200 (460)
T cd03788 131 PGDLVWVHDYHLL-LL--PQMLRERGPDARIGFFLHIPFPSSEIFRCLPW-----REELLRGLLG--ADLIGFQTERYAR 200 (460)
T ss_pred CCCEEEEeChhhh-HH--HHHHHhhCCCCeEEEEEeCCCCChHHHhhCCC-----hHHHHHHHhc--CCEEEECCHHHHH
Confidence 4699999998554 33 233444332 789999988866543211100 0111111111 35555554222 2
Q ss_pred cc--------------------CC--Ccc-ccccccCCCCcCcchhhhH-----HhhcCCCCCccEEEEEeeccccCCHH
Q 008544 238 EY--------------------PN--SIV-CNVHGVNPKFLEIGEKKME-----QQQNGNKAFTKGAYYIGRMVWSKGYE 289 (562)
Q Consensus 238 ~~--------------------~~--~~~-~~v~GVd~~~~~~~~~~~~-----~~~~~~~~~~~~il~vGr~~~~Kg~~ 289 (562)
.+ .. ..+ +..+|||++.|.+...... ....+..++.++|+++||+.+.||++
T Consensus 201 ~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~ 280 (460)
T cd03788 201 NFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIP 280 (460)
T ss_pred HHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHH
Confidence 21 01 112 2235999877654322111 11233445678999999999999999
Q ss_pred HHHHHHHHHHHhcCC----cEEEEEeCC-----CCHHHH----HHHHHhcCC--------eeEEeCC---CCChHHHHhh
Q 008544 290 ELLGLLNIYHKELAG----LEMDLYGNG-----EDFDQI----QRAAKKLKL--------VVRVYPG---RDHADPIFHD 345 (562)
Q Consensus 290 ~ll~a~~~l~~~~~~----~~l~ivG~g-----~~~~~l----~~~~~~l~l--------~~~~~~~---~~~~~~l~~~ 345 (562)
.+++|++.+.+++|+ ++|+++|.+ ++.+++ ++++.+++. .+.++++ .++..++|+.
T Consensus 281 ~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~ 360 (460)
T cd03788 281 ERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRA 360 (460)
T ss_pred HHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHh
Confidence 999999999888886 578888753 222333 344333321 2445544 4455599999
Q ss_pred cCEEEEccCCCCCcHHHHHHHHcCCc----EEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC---CccH
Q 008544 346 YKVFLNPSTTDVVCTATAEALAMGKI----VVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA---QPTD 415 (562)
Q Consensus 346 adv~v~pS~~E~~~~~~lEAma~G~P----VI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~---~l~~ 415 (562)
||+||+||..|+||++++||||||+| ||+|+.+| .+. +.+|++++ |+++++++|.+++++++. .+.+
T Consensus 361 aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~ 437 (460)
T cd03788 361 ADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDIDEVADAIHRALTMPLEERRERHR 437 (460)
T ss_pred ccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999999999999 99998776 554 46788875 999999999999998754 4444
Q ss_pred HHH---hcCCHHHHHHHHHHH
Q 008544 416 AQT---HQLSWESATERFLQV 433 (562)
Q Consensus 416 ~ar---~~~sw~~~~~~~~~~ 433 (562)
+++ .+|+|+..++++++.
T Consensus 438 ~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 438 KLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred HHHHHHHhCCHHHHHHHHHHh
Confidence 444 789999999998764
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.3e-21 Score=177.82 Aligned_cols=156 Identities=18% Similarity=0.231 Sum_probs=133.5
Q ss_pred HHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHh-cCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCCC--
Q 008544 263 EQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKE-LAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGRD-- 337 (562)
Q Consensus 263 ~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~-~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~~-- 337 (562)
.+.....+.+.++|+|+|++.+.||++.+++++..+..+ .++++++++|.++....++..++.+++. +.+++...
T Consensus 5 ~~~~~~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 84 (172)
T PF00534_consen 5 LREKLKIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYVPDD 84 (172)
T ss_dssp HHHHTTT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESHSHH
T ss_pred HHHHcCCCCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccccccccccccccccccccccccccccc
Confidence 344556667789999999999999999999999999875 7899999999888888889988888774 66666665
Q ss_pred ChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--C
Q 008544 338 HADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--Q 412 (562)
Q Consensus 338 ~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~ 412 (562)
+..++|+.+|++++||..|++|++++|||+||+|||+++.++ .|++.++.+|++++ |+++++++|.+++++++. .
T Consensus 85 ~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~ 164 (172)
T PF00534_consen 85 ELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEKLLNDPELRQK 164 (172)
T ss_dssp HHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHHHHCCHHHHHH
Confidence 667999999999999999999999999999999999999887 99999999999985 889999999999999864 6
Q ss_pred ccHHHH
Q 008544 413 PTDAQT 418 (562)
Q Consensus 413 l~~~ar 418 (562)
|+++++
T Consensus 165 l~~~~~ 170 (172)
T PF00534_consen 165 LGKNAR 170 (172)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 776665
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.9e-19 Score=184.98 Aligned_cols=257 Identities=18% Similarity=0.082 Sum_probs=163.4
Q ss_pred cCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhc
Q 008544 159 DEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQE 238 (562)
Q Consensus 159 ~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~ 238 (562)
+.+.+|++.+.|....+. . . ....++|+.+++.+..+... ... .. ...+.+.+. ||.|++.|+..++
T Consensus 100 ~~~~~i~~~~~P~~~~~~---~-~-~~~~~~Vyd~~D~~~~~~~~--~~~----~~-~~e~~~~~~-ad~vi~~S~~l~~ 166 (373)
T cd04950 100 GFGRPILWYYTPYTLPVA---A-L-LQASLVVYDCVDDLSAFPGG--PPE----LL-EAERRLLKR-ADLVFTTSPSLYE 166 (373)
T ss_pred CCCCcEEEEeCccHHHHH---h-h-cCCCeEEEEcccchhccCCC--CHH----HH-HHHHHHHHh-CCEEEECCHHHHH
Confidence 445567777766555222 1 1 22237888888766543321 111 11 223333333 7999999998888
Q ss_pred cCCC---cc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCC
Q 008544 239 YPNS---IV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGE 314 (562)
Q Consensus 239 ~~~~---~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~ 314 (562)
...+ .+ ...||+|.+.|.+..............+.+.++|+|++..+++++.+.+++ +..|+++|+++|.++
T Consensus 167 ~~~~~~~~i~~i~ngvd~~~f~~~~~~~~~~~~~~~~~~~~i~y~G~l~~~~d~~ll~~la----~~~p~~~~vliG~~~ 242 (373)
T cd04950 167 AKRRLNPNVVLVPNGVDYEHFAAARDPPPPPADLAALPRPVIGYYGAIAEWLDLELLEALA----KARPDWSFVLIGPVD 242 (373)
T ss_pred HHhhCCCCEEEcccccCHHHhhcccccCCChhHHhcCCCCEEEEEeccccccCHHHHHHHH----HHCCCCEEEEECCCc
Confidence 4322 22 233699987776433221100111223468999999999988877655544 456899999999973
Q ss_pred CHHHHHHHHHhcCCeeEEeCCC--CChHHHHhhcCEEEEccC-----CCCCcHHHHHHHHcCCcEEeeCCCCccccccCC
Q 008544 315 DFDQIQRAAKKLKLVVRVYPGR--DHADPIFHDYKVFLNPST-----TDVVCTATAEALAMGKIVVCANHPSNDFFKQFP 387 (562)
Q Consensus 315 ~~~~l~~~~~~l~l~~~~~~~~--~~~~~l~~~adv~v~pS~-----~E~~~~~~lEAma~G~PVI~t~~~~~e~v~~~~ 387 (562)
........ .. ..+++++|.. ++...+++.+|++++|+. .+++|++++||||||+|||+|+.+. +.....
T Consensus 243 ~~~~~~~~-~~-~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~--~~~~~~ 318 (373)
T cd04950 243 VSIDPSAL-LR-LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPE--VRRYED 318 (373)
T ss_pred CccChhHh-cc-CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHH--HHhhcC
Confidence 32222222 11 2346666654 466699999999999975 2468999999999999999998754 333334
Q ss_pred ceEee-CCHHHHHHHHHHHHhCCCC-CccHH--HHhcCCHHHHHHHHHHHHHh
Q 008544 388 NCRTY-DGRNGFVEATLKALAEEPA-QPTDA--QTHQLSWESATERFLQVAEL 436 (562)
Q Consensus 388 ~g~~~-~d~~~la~~i~~ll~~~~~-~l~~~--ar~~~sw~~~~~~~~~~y~~ 436 (562)
++++. +|+++|+++|.+++.++.. ...+. ..+++||++.++++.+..+.
T Consensus 319 ~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 319 EVVLIADDPEEFVAAIEKALLEDGPARERRRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred cEEEeCCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 45444 5899999999998766544 22222 23889999999999965543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=189.83 Aligned_cols=258 Identities=13% Similarity=0.123 Sum_probs=173.7
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccE
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHK 228 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 228 (562)
...+.+++++.+||+||++.|... +. ......+.+ |++ ++++++... ..|+.+ ++|.
T Consensus 93 ~~~l~~~l~~~kPDvVi~~~p~~~--~~-~l~~~~~~~iP~~-~v~td~~~~-----------------~~w~~~-~~d~ 150 (391)
T PRK13608 93 LNKLINLLIKEKPDLILLTFPTPV--MS-VLTEQFNINIPVA-TVMTDYRLH-----------------KNWITP-YSTR 150 (391)
T ss_pred HHHHHHHHHHhCcCEEEECCcHHH--HH-HHHHhcCCCCCEE-EEeCCCCcc-----------------cccccC-CCCE
Confidence 457888999999999999877543 21 111122223 654 455554210 112233 3799
Q ss_pred EEEcChhhhccCC------Ccccccccc--CCCCcCcchhhhHHhhcCCCCCccE-EEEEeeccccCCHHHHHHHHHHHH
Q 008544 229 VIRLSAATQEYPN------SIVCNVHGV--NPKFLEIGEKKMEQQQNGNKAFTKG-AYYIGRMVWSKGYEELLGLLNIYH 299 (562)
Q Consensus 229 vi~~S~~~~~~~~------~~~~~v~GV--d~~~~~~~~~~~~~~~~~~~~~~~~-il~vGr~~~~Kg~~~ll~a~~~l~ 299 (562)
+++.|+..++... +.+. +.|+ +..+..+......+...+++++.++ +++.|++...||++.+++++.
T Consensus 151 ~~v~s~~~~~~l~~~gi~~~ki~-v~GiPv~~~f~~~~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~--- 226 (391)
T PRK13608 151 YYVATKETKQDFIDVGIDPSTVK-VTGIPIDNKFETPIDQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDIL--- 226 (391)
T ss_pred EEECCHHHHHHHHHcCCCHHHEE-EECeecChHhcccccHHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHH---
Confidence 9999988877422 1222 2243 3334332223333445666655554 567899998899999999863
Q ss_pred HhcCCcEEEEEeCCC-C-HHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCC
Q 008544 300 KELAGLEMDLYGNGE-D-FDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANH 377 (562)
Q Consensus 300 ~~~~~~~l~ivG~g~-~-~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~ 377 (562)
+..+++++++++++. . .+++++.... ..++.+++..+++.++|+.||++|. ++.|+++.|||+||+|+|+++.
T Consensus 227 ~~~~~~~~vvv~G~~~~l~~~l~~~~~~-~~~v~~~G~~~~~~~~~~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~ 301 (391)
T PRK13608 227 AKSANAQVVMICGKSKELKRSLTAKFKS-NENVLILGYTKHMNEWMASSQLMIT----KPGGITISEGLARCIPMIFLNP 301 (391)
T ss_pred hcCCCceEEEEcCCCHHHHHHHHHHhcc-CCCeEEEeccchHHHHHHhhhEEEe----CCchHHHHHHHHhCCCEEECCC
Confidence 344688887765322 1 2344443322 2246677778889999999999996 3468999999999999999964
Q ss_pred -CC-----ccccccCCceEeeCCHHHHHHHHHHHHhCCCC--CccHHHH---hcCCHHHHHHHHHHHHHhcC
Q 008544 378 -PS-----NDFFKQFPNCRTYDGRNGFVEATLKALAEEPA--QPTDAQT---HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 378 -~~-----~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~--~l~~~ar---~~~sw~~~~~~~~~~y~~~~ 438 (562)
++ ..++.+...|+..+|+++++++|.++++|++. +|+++++ +.++++.+++.+++.++...
T Consensus 302 ~pgqe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~ 373 (391)
T PRK13608 302 APGQELENALYFEEKGFGKIADTPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSS 373 (391)
T ss_pred CCCcchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhh
Confidence 34 23445667777788999999999999998875 8888887 67999999999999887544
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=189.84 Aligned_cols=259 Identities=10% Similarity=0.015 Sum_probs=172.7
Q ss_pred HhHHhhcCcCCCcEEEecCCchhhhh-hchHHHHh--hcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhc
Q 008544 151 GDITEIIPDEEADIAVLEEPEHLTWF-HHGKRWKA--KFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHC 226 (562)
Q Consensus 151 ~~l~~~i~~~~pDvV~~~~~~~~~~~-~~~~~~~~--~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 226 (562)
..+.++|++++||+||++.|...... .....+.+ ..+ |.+.++. ++... ...|+.+ .+
T Consensus 90 ~~l~~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~t-D~~~~----------------~~~w~~~-~~ 151 (382)
T PLN02605 90 REVAKGLMKYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVT-DLGTC----------------HPTWFHK-GV 151 (382)
T ss_pred HHHHHHHHhcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEEC-CCCCc----------------CcccccC-CC
Confidence 56778899999999999876532110 00111221 123 6665554 43110 0122233 37
Q ss_pred cEEEEcChhhhcc------CCCccccc-cccCCCCcCcc-hhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHH
Q 008544 227 HKVIRLSAATQEY------PNSIVCNV-HGVNPKFLEIG-EKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIY 298 (562)
Q Consensus 227 d~vi~~S~~~~~~------~~~~~~~v-~GVd~~~~~~~-~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l 298 (562)
|.+++.|+..++. +.+++..+ ++++..+..+. .....+...+++++.++|+++|+....|++..+++++..+
T Consensus 152 d~~~~~s~~~~~~l~~~g~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~ 231 (382)
T PLN02605 152 TRCFCPSEEVAKRALKRGLEPSQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDS 231 (382)
T ss_pred CEEEECCHHHHHHHHHcCCCHHHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHh
Confidence 9999999888763 22223222 35555554422 2334566788888889999999999999999999998765
Q ss_pred HH----hcCCcE-EEEEeCCCC-HHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcE
Q 008544 299 HK----ELAGLE-MDLYGNGED-FDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIV 372 (562)
Q Consensus 299 ~~----~~~~~~-l~ivG~g~~-~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PV 372 (562)
.. ..++.+ ++++|.++. .+.+++. ..+..++++|..+++.++|+.+|++|.++ .|++++||||||+||
T Consensus 232 ~~~~~~~~~~~~~~vi~G~~~~~~~~L~~~--~~~~~v~~~G~~~~~~~l~~aaDv~V~~~----g~~ti~EAma~g~Pv 305 (382)
T PLN02605 232 LYDKNLGKPIGQVVVICGRNKKLQSKLESR--DWKIPVKVRGFVTNMEEWMGACDCIITKA----GPGTIAEALIRGLPI 305 (382)
T ss_pred hccccccCCCceEEEEECCCHHHHHHHHhh--cccCCeEEEeccccHHHHHHhCCEEEECC----CcchHHHHHHcCCCE
Confidence 31 135665 566776532 3444443 12345777888889999999999999865 488999999999999
Q ss_pred EeeCC------CCccccccCCceEeeCCHHHHHHHHHHHHhC-CCC--CccHHHH---hcCCHHHHHHHHHHH
Q 008544 373 VCANH------PSNDFFKQFPNCRTYDGRNGFVEATLKALAE-EPA--QPTDAQT---HQLSWESATERFLQV 433 (562)
Q Consensus 373 I~t~~------~~~e~v~~~~~g~~~~d~~~la~~i~~ll~~-~~~--~l~~~ar---~~~sw~~~~~~~~~~ 433 (562)
|+++. ++.+++.++..|+...|+++++++|.+++++ ++. .|+++++ ...+++.+++.+.+.
T Consensus 306 I~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 306 ILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred EEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 99984 2344556666777779999999999999998 544 7777776 455666666666543
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.5e-19 Score=188.05 Aligned_cols=257 Identities=14% Similarity=0.073 Sum_probs=171.0
Q ss_pred CcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhc-
Q 008544 162 ADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQE- 238 (562)
Q Consensus 162 pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~- 238 (562)
-|+|.+|....+ .+ +..+..+.. ++.+..|..|+...-..... ..+.+.+-+. .||.|-..+....+
T Consensus 128 ~d~vwvhDYhl~-l~--p~~lr~~~~~~~igfFlHipfP~~e~f~~lp-----~r~~il~gll--~~dligF~t~~~~~~ 197 (456)
T TIGR02400 128 GDIVWVHDYHLM-LL--PAMLRELGVQNKIGFFLHIPFPSSEIYRTLP-----WRRELLEGLL--AYDLVGFQTYDDARN 197 (456)
T ss_pred CCEEEEecchhh-HH--HHHHHhhCCCCeEEEEEeCCCCChHHHhhCC-----cHHHHHHHHh--cCCEEEECCHHHHHH
Confidence 489999987655 33 333444333 56678888776543221111 1122222222 35888777755544
Q ss_pred cC-------------------CC--cc-ccccccCCCCcCcchhhh--------HHhhcCCCCCccEEEEEeeccccCCH
Q 008544 239 YP-------------------NS--IV-CNVHGVNPKFLEIGEKKM--------EQQQNGNKAFTKGAYYIGRMVWSKGY 288 (562)
Q Consensus 239 ~~-------------------~~--~~-~~v~GVd~~~~~~~~~~~--------~~~~~~~~~~~~~il~vGr~~~~Kg~ 288 (562)
+. .. .+ ...+|||++.|.+..... .+... .+.++|+++||+++.||+
T Consensus 198 Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VgRLd~~KGi 274 (456)
T TIGR02400 198 FLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL---KGRKLIIGVDRLDYSKGL 274 (456)
T ss_pred HHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHc---CCCeEEEEccccccccCH
Confidence 10 01 01 122589987765432111 11112 347899999999999999
Q ss_pred HHHHHHHHHHHHhcCC----cEEEEEe-----CCCCHHHHHHHHHhc----CC--------eeEEeCC---CCChHHHHh
Q 008544 289 EELLGLLNIYHKELAG----LEMDLYG-----NGEDFDQIQRAAKKL----KL--------VVRVYPG---RDHADPIFH 344 (562)
Q Consensus 289 ~~ll~a~~~l~~~~~~----~~l~ivG-----~g~~~~~l~~~~~~l----~l--------~~~~~~~---~~~~~~l~~ 344 (562)
+.+++|++++.+++|+ +.|+++| ++++.+++++.++++ +. .+.++++ .++..++|+
T Consensus 275 ~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~ 354 (456)
T TIGR02400 275 PERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYR 354 (456)
T ss_pred HHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHH
Confidence 9999999999888886 4577774 344455566555544 11 2444554 344558999
Q ss_pred hcCEEEEccCCCCCcHHHHHHHHcCCc----EEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC---Ccc
Q 008544 345 DYKVFLNPSTTDVVCTATAEALAMGKI----VVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA---QPT 414 (562)
Q Consensus 345 ~adv~v~pS~~E~~~~~~lEAma~G~P----VI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~---~l~ 414 (562)
.||+||+||..||||++++||||||+| ||+|+.+| .+.+. +|++++ |+++++++|.++++++.. ++.
T Consensus 355 aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~ 431 (456)
T TIGR02400 355 AADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMADAIARALTMPLEEREERH 431 (456)
T ss_pred hCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Confidence 999999999999999999999999999 99998776 66663 688874 999999999999997764 223
Q ss_pred HHHH---hcCCHHHHHHHHHHHH
Q 008544 415 DAQT---HQLSWESATERFLQVA 434 (562)
Q Consensus 415 ~~ar---~~~sw~~~~~~~~~~y 434 (562)
++.+ .++++...++++++..
T Consensus 432 ~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 432 RAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred HHHHHHHhhCCHHHHHHHHHHHh
Confidence 3223 7799999999988654
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-18 Score=195.39 Aligned_cols=266 Identities=12% Similarity=0.025 Sum_probs=171.6
Q ss_pred CcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhc-
Q 008544 162 ADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQE- 238 (562)
Q Consensus 162 pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~- 238 (562)
-|+|.+|....+ .+ ...+.++.. ++.+.+|..|+.+.-..-... ...+++- +. .||.|-+.+....+
T Consensus 148 ~d~vWvhDYhL~-ll--p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~-r~~il~g----ll--~aDligF~t~~y~r~ 217 (797)
T PLN03063 148 GDVVWCHDYHLM-FL--PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPS-RSELLRA----VL--TADLIGFHTYDFARH 217 (797)
T ss_pred CCEEEEecchhh-hH--HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCC-HHHHHHH----Hh--cCCEEEeCCHHHHHH
Confidence 389999986554 33 233444433 688888988876553321111 1111111 11 13544444433332
Q ss_pred -----------------cC--C--Ccc-ccccccCCCCcCcchhh-----hHHhhcCCCCCccEEEEEeeccccCCHHHH
Q 008544 239 -----------------YP--N--SIV-CNVHGVNPKFLEIGEKK-----MEQQQNGNKAFTKGAYYIGRMVWSKGYEEL 291 (562)
Q Consensus 239 -----------------~~--~--~~~-~~v~GVd~~~~~~~~~~-----~~~~~~~~~~~~~~il~vGr~~~~Kg~~~l 291 (562)
+. . ..+ +..+|||+..|.+.... ..........+.++|+++||+.+.||++.+
T Consensus 218 Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~l 297 (797)
T PLN03063 218 FLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQK 297 (797)
T ss_pred HHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHH
Confidence 10 0 011 22258988766432211 011101112247899999999999999999
Q ss_pred HHHHHHHHHhcCCcE--EEE--Ee-----CCCCHHHHHHHHHhcC--Ce----------eEEeCC---CCChHHHHhhcC
Q 008544 292 LGLLNIYHKELAGLE--MDL--YG-----NGEDFDQIQRAAKKLK--LV----------VRVYPG---RDHADPIFHDYK 347 (562)
Q Consensus 292 l~a~~~l~~~~~~~~--l~i--vG-----~g~~~~~l~~~~~~l~--l~----------~~~~~~---~~~~~~l~~~ad 347 (562)
++|++.+.+++|+++ +++ ++ ++++.+++++.++++. ++ ++++.+ .++..++|+.||
T Consensus 298 L~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~AD 377 (797)
T PLN03063 298 YLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITD 377 (797)
T ss_pred HHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCC
Confidence 999999998888864 333 33 3444566766666653 22 222332 234448999999
Q ss_pred EEEEccCCCCCcHHHHHHHHcCCc----EEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC---CccHHH
Q 008544 348 VFLNPSTTDVVCTATAEALAMGKI----VVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA---QPTDAQ 417 (562)
Q Consensus 348 v~v~pS~~E~~~~~~lEAma~G~P----VI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~---~l~~~a 417 (562)
+||+||..||++++++||||||+| +|.|+.+| .+.+ +.+|++++ |+++++++|.++++.++. ...++.
T Consensus 378 vfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~ 455 (797)
T PLN03063 378 VMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHN 455 (797)
T ss_pred EEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999999999999999999999 99998887 6655 45788874 999999999999996553 222222
Q ss_pred H---hcCCHHHHHHHHHHHHHhcCc
Q 008544 418 T---HQLSWESATERFLQVAELVGD 439 (562)
Q Consensus 418 r---~~~sw~~~~~~~~~~y~~~~~ 439 (562)
+ .+++|...++.+++.++.+..
T Consensus 456 ~~~v~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 456 FQYVKTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred HHhhhhCCHHHHHHHHHHHHHHHhh
Confidence 2 889999999999998887663
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.2e-16 Score=163.34 Aligned_cols=264 Identities=12% Similarity=0.060 Sum_probs=155.0
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHH-HHHHHhcc
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNS-WLARVHCH 227 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ad 227 (562)
+..+.+++++.+||+||+|+.....+. +...+.+.+ |++.+-+.. ..+..... +....++ ...+. ||
T Consensus 75 ~~~l~~~l~~~~pDiv~~~gd~~~~la--~a~aa~~~~ipv~h~~~g~-~s~~~~~~-------~~~~~~r~~~~~~-ad 143 (365)
T TIGR00236 75 LEGLEELLLEEKPDIVLVQGDTTTTLA--GALAAFYLQIPVGHVEAGL-RTGDRYSP-------MPEEINRQLTGHI-AD 143 (365)
T ss_pred HHHHHHHHHHcCCCEEEEeCCchHHHH--HHHHHHHhCCCEEEEeCCC-CcCCCCCC-------CccHHHHHHHHHH-HH
Confidence 456888899999999999986544333 334445545 665332211 10000000 0011112 22233 79
Q ss_pred EEEEcChhhhccC------CCccccc-ccc-CCCCcCc--chhhhHHhhcCCCCCccEEEEEe-ec-cccCCHHHHHHHH
Q 008544 228 KVIRLSAATQEYP------NSIVCNV-HGV-NPKFLEI--GEKKMEQQQNGNKAFTKGAYYIG-RM-VWSKGYEELLGLL 295 (562)
Q Consensus 228 ~vi~~S~~~~~~~------~~~~~~v-~GV-d~~~~~~--~~~~~~~~~~~~~~~~~~il~vG-r~-~~~Kg~~~ll~a~ 295 (562)
.+++.|+..++.. .+.+..+ +++ |...... ..........+ .+.+++++.+ +. ...||++.+++++
T Consensus 144 ~~~~~s~~~~~~l~~~G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~--~~~~~vl~~~hr~~~~~k~~~~ll~a~ 221 (365)
T TIGR00236 144 LHFAPTEQAKDNLLRENVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFG--EDKRYILLTLHRRENVGEPLENIFKAI 221 (365)
T ss_pred hccCCCHHHHHHHHHcCCCcccEEEeCChHHHHHHHHHhhccchhHHHhcC--CCCCEEEEecCchhhhhhHHHHHHHHH
Confidence 9999998888732 2222222 343 3211111 10111122232 2234555555 43 3458999999999
Q ss_pred HHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCC--eeEEeCC--CCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCc
Q 008544 296 NIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKL--VVRVYPG--RDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKI 371 (562)
Q Consensus 296 ~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l--~~~~~~~--~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~P 371 (562)
.++.++.|++++++.|.+... ......+.++. ++.+++. +.+...+++.+|+++.+| |..++|||+||+|
T Consensus 222 ~~l~~~~~~~~~vi~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~P 295 (365)
T TIGR00236 222 REIVEEFEDVQIVYPVHLNPV-VREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDS-----GGVQEEAPSLGKP 295 (365)
T ss_pred HHHHHHCCCCEEEEECCCChH-HHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCCC
Confidence 999888889999988654321 11122233332 4566654 334458899999999887 5568999999999
Q ss_pred EEee-CCCC-ccccccCCceEeeCCHHHHHHHHHHHHhCCCC--CccHHHH---hcCCHHHHHHHHHH
Q 008544 372 VVCA-NHPS-NDFFKQFPNCRTYDGRNGFVEATLKALAEEPA--QPTDAQT---HQLSWESATERFLQ 432 (562)
Q Consensus 372 VI~t-~~~~-~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~--~l~~~ar---~~~sw~~~~~~~~~ 432 (562)
||++ +.++ .+.+.++.++++..|++++++++.+++++++. +|+++.. ...+++++++.+.+
T Consensus 296 vI~~~~~~~~~e~~~~g~~~lv~~d~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 296 VLVLRDTTERPETVEAGTNKLVGTDKENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred EEECCCCCCChHHHhcCceEEeCCCHHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 9997 5565 67777665555446999999999999988764 4444332 23345555554444
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-16 Score=164.43 Aligned_cols=262 Identities=13% Similarity=0.046 Sum_probs=162.3
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccE
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHK 228 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 228 (562)
...+.+.+++.+||+||+|......+. +...++..+ |++.+.++... +.... ... ....++.+. +|.
T Consensus 77 ~~~l~~~l~~~~pDvV~~~g~~~~~~~--~~~aa~~~~iPvv~~~~g~~s-~~~~~-~~~-------~~r~~~~~~-ad~ 144 (363)
T cd03786 77 LIGLEAVLLEEKPDLVLVLGDTNETLA--AALAAFKLGIPVAHVEAGLRS-FDRGM-PDE-------ENRHAIDKL-SDL 144 (363)
T ss_pred HHHHHHHHHHhCCCEEEEeCCchHHHH--HHHHHHHcCCCEEEEeccccc-CCCCC-Cch-------HHHHHHHHH-hhh
Confidence 455777788889999999975443333 333444445 77755543211 10000 000 111223333 799
Q ss_pred EEEcChhhhccC------CCccccc-ccc-CCCCcCcchh--hhHHhhcCCCCCccEEEEEeeccc---cCCHHHHHHHH
Q 008544 229 VIRLSAATQEYP------NSIVCNV-HGV-NPKFLEIGEK--KMEQQQNGNKAFTKGAYYIGRMVW---SKGYEELLGLL 295 (562)
Q Consensus 229 vi~~S~~~~~~~------~~~~~~v-~GV-d~~~~~~~~~--~~~~~~~~~~~~~~~il~vGr~~~---~Kg~~~ll~a~ 295 (562)
+++.|+..++.. .+.+..+ +++ |...+..... ...+...+.++...++++.|+... .||++.+++++
T Consensus 145 ~~~~s~~~~~~l~~~G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al 224 (363)
T cd03786 145 HFAPTEEARRNLLQEGEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTLHRVENVDDGEQLEEILEAL 224 (363)
T ss_pred ccCCCHHHHHHHHHcCCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHH
Confidence 999998888742 2223222 333 3221111111 111123445554556778888764 79999999999
Q ss_pred HHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCC---eeEEeC--CCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCC
Q 008544 296 NIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKL---VVRVYP--GRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGK 370 (562)
Q Consensus 296 ~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l---~~~~~~--~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~ 370 (562)
..+... ++.+++.|.++..+.+++.+.+++. ++.+.+ .+.+...+|+.||++|.+|. + .+.|||++|+
T Consensus 225 ~~l~~~--~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~ 297 (363)
T cd03786 225 AELAEE--DVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLGV 297 (363)
T ss_pred HHHHhc--CCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCC
Confidence 988654 6788877877767888888777653 455553 35567789999999999984 3 4799999999
Q ss_pred cEEeeCCC-C-ccccccCCceEeeCCHHHHHHHHHHHHhCCCC--CccHHHHhcCCHHHHHHHHHHH
Q 008544 371 IVVCANHP-S-NDFFKQFPNCRTYDGRNGFVEATLKALAEEPA--QPTDAQTHQLSWESATERFLQV 433 (562)
Q Consensus 371 PVI~t~~~-~-~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~--~l~~~ar~~~sw~~~~~~~~~~ 433 (562)
|||+++.. . .+.++++.++.+.+|+++++++|.++++++.. .|. ...|.-...++++.++
T Consensus 298 PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~~~~~~~---~~~~~~~~a~~~I~~~ 361 (363)
T cd03786 298 PVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDEFAYSLMS---INPYGDGNASERIVEI 361 (363)
T ss_pred CEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCchhhhcCC---CCCCCCCHHHHHHHHH
Confidence 99999653 3 66666554444445799999999999998765 443 2233333445555443
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1e-16 Score=165.85 Aligned_cols=212 Identities=17% Similarity=0.205 Sum_probs=154.5
Q ss_pred ccEEEEcChhhhccCCCccccc---------cccCCCCcCcchhhh-------HHhhcCCCCCccEEEEEeeccccCCHH
Q 008544 226 CHKVIRLSAATQEYPNSIVCNV---------HGVNPKFLEIGEKKM-------EQQQNGNKAFTKGAYYIGRMVWSKGYE 289 (562)
Q Consensus 226 ad~vi~~S~~~~~~~~~~~~~v---------~GVd~~~~~~~~~~~-------~~~~~~~~~~~~~il~vGr~~~~Kg~~ 289 (562)
++++++.|..++..+....... .+||...+.++.... .+...+....+....-+.++.+.||+.
T Consensus 210 ~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~ 289 (495)
T KOG0853|consen 210 AWKILVNSYFTKRQFKATFVSLSNSDITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKDQD 289 (495)
T ss_pred cceEecchhhhhhhhhhhhhhcCCCCcceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecCCCCCce
Confidence 6899998888777443322222 255555544321111 011122233355666778999999999
Q ss_pred HHHHHHHHHHHhc-----CCcEEEEEeCC-CC---------HHHHHHHHHhcCCe--eEEe-CCCCChH--HHHhhcC-E
Q 008544 290 ELLGLLNIYHKEL-----AGLEMDLYGNG-ED---------FDQIQRAAKKLKLV--VRVY-PGRDHAD--PIFHDYK-V 348 (562)
Q Consensus 290 ~ll~a~~~l~~~~-----~~~~l~ivG~g-~~---------~~~l~~~~~~l~l~--~~~~-~~~~~~~--~l~~~ad-v 348 (562)
.+++++.++.... ++.++.++|+. .+ .++++++++++++. ..++ ....+.. .++++++ +
T Consensus 290 l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt~~v 369 (495)
T KOG0853|consen 290 LALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADTKGV 369 (495)
T ss_pred eehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHHHHHHHhcceE
Confidence 9999999998877 45788888832 11 26778888888773 3334 4455555 4444444 5
Q ss_pred EEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC-CHH---HHHHHHHHHHhCCCC--CccHHHH---
Q 008544 349 FLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD-GRN---GFVEATLKALAEEPA--QPTDAQT--- 418 (562)
Q Consensus 349 ~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~-d~~---~la~~i~~ll~~~~~--~l~~~ar--- 418 (562)
++.|.. |.||++++|||+||+|||+|+.|| .|++.++.+|++++ +.+ .+++++.++..|++. +|+++++
T Consensus 370 ~~qPa~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV 448 (495)
T KOG0853|consen 370 LYQPAN-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDPGQEAVAELADALLKLRRDPELWARMGKNGLKRV 448 (495)
T ss_pred EecCCC-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 556666 999999999999999999999999 99999999999986 555 599999999999997 8999888
Q ss_pred -hcCCHHHHHHHHHHHHHhcC
Q 008544 419 -HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 419 -~~~sw~~~~~~~~~~y~~~~ 438 (562)
+.|+|....+++.+......
T Consensus 449 ~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 449 KEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred HHHHhHHHHHHHHHHHhHhcC
Confidence 66999999999998887554
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.9e-17 Score=180.70 Aligned_cols=264 Identities=11% Similarity=0.083 Sum_probs=168.0
Q ss_pred CcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhc-
Q 008544 162 ADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQE- 238 (562)
Q Consensus 162 pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~- 238 (562)
-|+|.+|....+ .+ +..+.++.. ++-+..|..|+...-..-.. ..+.+..-+. .||.|-..+....+
T Consensus 134 ~d~vwvhDYhl~-l~--p~~lr~~~~~~~igfFlH~pfP~~~~f~~lp-----~~~~ll~~ll--~~Dligf~t~~~~r~ 203 (726)
T PRK14501 134 GDVVWVHDYQLM-LL--PAMLRERLPDARIGFFLHIPFPSFEVFRLLP-----WREEILEGLL--GADLIGFHTYDYVRH 203 (726)
T ss_pred CCEEEEeCchhh-hH--HHHHHhhCCCCcEEEEeeCCCCChHHHhhCC-----ChHHHHHHHh--cCCeEEeCCHHHHHH
Confidence 389999987665 23 333444433 67778888776543211111 1111111111 24555555543222
Q ss_pred -------------------cCCCc--cc-cccccCCCCcCcchhhhH-----HhhcCCCCCccEEEEEeeccccCCHHHH
Q 008544 239 -------------------YPNSI--VC-NVHGVNPKFLEIGEKKME-----QQQNGNKAFTKGAYYIGRMVWSKGYEEL 291 (562)
Q Consensus 239 -------------------~~~~~--~~-~v~GVd~~~~~~~~~~~~-----~~~~~~~~~~~~il~vGr~~~~Kg~~~l 291 (562)
+.... +. ..+|||++.|.+...... ..-.....+.++|+++||+.+.||+..+
T Consensus 204 Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~ 283 (726)
T PRK14501 204 FLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRR 283 (726)
T ss_pred HHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHH
Confidence 11111 11 225899877754321110 0000112346799999999999999999
Q ss_pred HHHHHHHHHhcCC----cEEEEEeCC-----CCHHHHHHHHHhc----C--------CeeEEeCC---CCChHHHHhhcC
Q 008544 292 LGLLNIYHKELAG----LEMDLYGNG-----EDFDQIQRAAKKL----K--------LVVRVYPG---RDHADPIFHDYK 347 (562)
Q Consensus 292 l~a~~~l~~~~~~----~~l~ivG~g-----~~~~~l~~~~~~l----~--------l~~~~~~~---~~~~~~l~~~ad 347 (562)
++|++++.+.+|+ ++|+++|.+ ++.+++++.++++ + ..+.++.+ .++..++|+.||
T Consensus 284 l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aD 363 (726)
T PRK14501 284 LLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAAD 363 (726)
T ss_pred HHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhcc
Confidence 9999999888886 688888742 2234444444332 2 12444433 445559999999
Q ss_pred EEEEccCCCCCcHHHHHHHHcCC-----cEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC---CccHH
Q 008544 348 VFLNPSTTDVVCTATAEALAMGK-----IVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA---QPTDA 416 (562)
Q Consensus 348 v~v~pS~~E~~~~~~lEAma~G~-----PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~---~l~~~ 416 (562)
+|++||..||||++++||||||+ ||++...|+ .++. +|++++ |+++++++|.++++++.. ...++
T Consensus 364 v~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~ 439 (726)
T PRK14501 364 VALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPNDIEGIAAAIKRALEMPEEEQRERMQA 439 (726)
T ss_pred EEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 99999999999999999999954 666666676 5553 477764 999999999999997653 22223
Q ss_pred HH---hcCCHHHHHHHHHHHHHhcCc
Q 008544 417 QT---HQLSWESATERFLQVAELVGD 439 (562)
Q Consensus 417 ar---~~~sw~~~~~~~~~~y~~~~~ 439 (562)
++ .+|||+..++++++.|+.+..
T Consensus 440 ~~~~v~~~~~~~w~~~~l~~l~~~~~ 465 (726)
T PRK14501 440 MQERLRRYDVHKWASDFLDELREAAE 465 (726)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 33 789999999999999988753
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.3e-16 Score=162.59 Aligned_cols=246 Identities=13% Similarity=0.052 Sum_probs=153.8
Q ss_pred hHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhcc
Q 008544 149 AVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCH 227 (562)
Q Consensus 149 ~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 227 (562)
....+.+++++.+||+||+++.... +... ...+++.+ |++...+.. .+.. .....++ +.+. +|
T Consensus 73 ~~~~~~~~l~~~kPdivi~~~~~~~-~~~~-a~~a~~~~ip~i~~~~~~--~~~~----------~~~~~~~-~~~~-~d 136 (380)
T PRK00025 73 IRRRLKRRLLAEPPDVFIGIDAPDF-NLRL-EKKLRKAGIPTIHYVSPS--VWAW----------RQGRAFK-IAKA-TD 136 (380)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCC-CHHH-HHHHHHCCCCEEEEeCCc--hhhc----------CchHHHH-HHHH-Hh
Confidence 3556788899999999999864322 1111 12233334 776554421 1110 0111122 2232 69
Q ss_pred EEEEcChhhhccCCCc-c-ccccccCC-CCcC-cchhhhHHhhcCCCCCccEEE-EEe-ecccc-CCHHHHHHHHHHHHH
Q 008544 228 KVIRLSAATQEYPNSI-V-CNVHGVNP-KFLE-IGEKKMEQQQNGNKAFTKGAY-YIG-RMVWS-KGYEELLGLLNIYHK 300 (562)
Q Consensus 228 ~vi~~S~~~~~~~~~~-~-~~v~GVd~-~~~~-~~~~~~~~~~~~~~~~~~~il-~vG-r~~~~-Kg~~~ll~a~~~l~~ 300 (562)
.+++.|+..++...+. . ..+.|.+. +... .......+...+++++.++++ +.| +.... ++.+.+++++..+.+
T Consensus 137 ~i~~~~~~~~~~~~~~g~~~~~~G~p~~~~~~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~ 216 (380)
T PRK00025 137 HVLALFPFEAAFYDKLGVPVTFVGHPLADAIPLLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQ 216 (380)
T ss_pred hheeCCccCHHHHHhcCCCeEEECcCHHHhcccccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999998777653321 1 11224322 1111 112233344566666566654 444 33333 457899999999988
Q ss_pred hcCCcEEEEEeC-CCCHHHHHHHHHhc-CCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeC--
Q 008544 301 ELAGLEMDLYGN-GEDFDQIQRAAKKL-KLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCAN-- 376 (562)
Q Consensus 301 ~~~~~~l~ivG~-g~~~~~l~~~~~~l-~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~-- 376 (562)
+.|+++++++|. ++..+++++.+++. ++++.++. .+..++|+.||++|.+| |.+++|||+||+|+|++.
T Consensus 217 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~ 289 (380)
T PRK00025 217 RYPDLRFVLPLVNPKRREQIEEALAEYAGLEVTLLD--GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKV 289 (380)
T ss_pred hCCCeEEEEecCChhhHHHHHHHHhhcCCCCeEEEc--ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEcc
Confidence 888999999986 55567788887777 66655544 47789999999999998 788889999999999872
Q ss_pred ---------------CCC-ccccccCC--ceEee--CCHHHHHHHHHHHHhCCCC--CccHHH
Q 008544 377 ---------------HPS-NDFFKQFP--NCRTY--DGRNGFVEATLKALAEEPA--QPTDAQ 417 (562)
Q Consensus 377 ---------------~~~-~e~v~~~~--~g~~~--~d~~~la~~i~~ll~~~~~--~l~~~a 417 (562)
.++ .+++.++. .+++. .|++++++++.++++|++. .|++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~ 352 (380)
T PRK00025 290 SPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGF 352 (380)
T ss_pred CHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 222 45554443 23443 3899999999999998875 555554
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.5e-14 Score=136.67 Aligned_cols=271 Identities=13% Similarity=0.080 Sum_probs=175.0
Q ss_pred hcCcCCCcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcH--HHH----hhhhch--HHHHHHHHHHHHHHHHH-
Q 008544 156 IIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYL--EYV----KREKND--RLQAFLLEFVNSWLARV- 224 (562)
Q Consensus 156 ~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~--~~~----~~~~~~--~~~~~~~~~~~~~~~~~- 224 (562)
.+-+..|||.+-.....+.+- +.+.+. |++.++|-.-. +.. ++...+ .+-+..+.++...++..
T Consensus 145 ai~r~~Pdi~IDtMGY~fs~p-----~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY~~~ 219 (465)
T KOG1387|consen 145 AIIRFPPDIFIDTMGYPFSYP-----IFRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLYQSA 219 (465)
T ss_pred HHHhCCchheEecCCCcchhH-----HHHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHHHhc
Confidence 345678999887655444222 222233 89999984411 111 111111 00111111111112221
Q ss_pred --hccEEEEcChhhhc----cCCCccccccccCCCCcCcchhhhHHhhcCC-CCCccEEEEEeeccccCCHHHHHHHHHH
Q 008544 225 --HCHKVIRLSAATQE----YPNSIVCNVHGVNPKFLEIGEKKMEQQQNGN-KAFTKGAYYIGRMVWSKGYEELLGLLNI 297 (562)
Q Consensus 225 --~ad~vi~~S~~~~~----~~~~~~~~v~GVd~~~~~~~~~~~~~~~~~~-~~~~~~il~vGr~~~~Kg~~~ll~a~~~ 297 (562)
.+|.+++.|..+++ ++.+..+.+ .++|..........+. ....+.++++|.+.|+|+.. +++.++.
T Consensus 220 G~~ad~vm~NssWT~nHI~qiW~~~~~~i------VyPPC~~e~lks~~~te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al 292 (465)
T KOG1387|consen 220 GSKADIVMTNSSWTNNHIKQIWQSNTCSI------VYPPCSTEDLKSKFGTEGERENQLLSLAQFRPEKNHK-ILQLFAL 292 (465)
T ss_pred cccceEEEecchhhHHHHHHHhhccceeE------EcCCCCHHHHHHHhcccCCcceEEEEEeecCcccccH-HHHHHHH
Confidence 48999999988877 333321111 1223222222323222 34467899999999999999 6665554
Q ss_pred HHHhc------CCcEEEEEeCCCC---H---HHHHHHHHhcCCeeE--E--eCCCCChHHHHhhcCEEEEccCCCCCcHH
Q 008544 298 YHKEL------AGLEMDLYGNGED---F---DQIQRAAKKLKLVVR--V--YPGRDHADPIFHDYKVFLNPSTTDVVCTA 361 (562)
Q Consensus 298 l~~~~------~~~~l~ivG~g~~---~---~~l~~~~~~l~l~~~--~--~~~~~~~~~l~~~adv~v~pS~~E~~~~~ 361 (562)
...+. ++++|+++|+-.. . +.++.+++++.++.+ | -.+++++.+++..|.+.|+.-+.|.||+.
T Consensus 293 ~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIs 372 (465)
T KOG1387|consen 293 YLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGIS 372 (465)
T ss_pred HHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccceeehhhhhhhhcchh
Confidence 44433 4599999998433 2 556778888887644 3 24577888999999999999999999999
Q ss_pred HHHHHHcCCcEEeeCCCC--cccccc---CCceEeeCCHHHHHHHHHHHHhCCCC---CccHHHH---hcCCHHHHHHHH
Q 008544 362 TAEALAMGKIVVCANHPS--NDFFKQ---FPNCRTYDGRNGFVEATLKALAEEPA---QPTDAQT---HQLSWESATERF 430 (562)
Q Consensus 362 ~lEAma~G~PVI~t~~~~--~e~v~~---~~~g~~~~d~~~la~~i~~ll~~~~~---~l~~~ar---~~~sw~~~~~~~ 430 (562)
+.|+||+|+..|+.+.|| -+++.+ ..+||+..+.++.++++.+++..... .|++++| .+|+=.+..+.+
T Consensus 373 VVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~ 452 (465)
T KOG1387|consen 373 VVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAPTDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDW 452 (465)
T ss_pred HHHHHhcCceEEEeCCCCCceeeeeccCCccceeecCChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhH
Confidence 999999999999999988 677754 46899999999999999999987664 6677777 666655555555
Q ss_pred HHHHHhcC
Q 008544 431 LQVAELVG 438 (562)
Q Consensus 431 ~~~y~~~~ 438 (562)
...++...
T Consensus 453 ~~~i~kll 460 (465)
T KOG1387|consen 453 ENPICKLL 460 (465)
T ss_pred hHHHHHhh
Confidence 55554433
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.6e-14 Score=138.50 Aligned_cols=362 Identities=14% Similarity=0.112 Sum_probs=215.9
Q ss_pred hhhccCCeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhh
Q 008544 44 LMDRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLED 123 (562)
Q Consensus 44 ~m~~~~~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~ 123 (562)
.++.+ +||++|.-. . -|-+-++..-|..|++.| ++|+++..-.+....+..-.+++++.....
T Consensus 8 ~~~~k-~ra~vvVLG---D-vGRSPRMqYHA~Sla~~g-f~VdliGy~~s~p~e~l~~hprI~ih~m~~----------- 70 (444)
T KOG2941|consen 8 NKSKK-KRAIVVVLG---D-VGRSPRMQYHALSLAKLG-FQVDLIGYVESIPLEELLNHPRIRIHGMPN----------- 70 (444)
T ss_pred ccccc-ceEEEEEec---c-cCCChHHHHHHHHHHHcC-CeEEEEEecCCCChHHHhcCCceEEEeCCC-----------
Confidence 34444 666666532 1 244667888999999998 999999762211111111012222222111
Q ss_pred ccCCCCCccc-ccccccchhccchhhh-HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcHH
Q 008544 124 RTGFTSTFDT-RFYPGKFAADKKSILA-VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYLE 199 (562)
Q Consensus 124 ~~~~~~~~~i-~~y~~r~~~~~~~~~~-~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~~ 199 (562)
.+. ...|......++...- ..-++.++-...+|++.+++|..+..+.. ..+...+. +.+..+| ||..
T Consensus 71 -------l~~~~~~p~~~~l~lKvf~Qfl~Ll~aL~~~~~~~~ilvQNPP~iPtliv-~~~~~~l~~~KfiIDWH-Ny~Y 141 (444)
T KOG2941|consen 71 -------LPFLQGGPRVLFLPLKVFWQFLSLLWALFVLRPPDIILVQNPPSIPTLIV-CVLYSILTGAKFIIDWH-NYGY 141 (444)
T ss_pred -------CcccCCCchhhhhHHHHHHHHHHHHHHHHhccCCcEEEEeCCCCCchHHH-HHHHHHHhcceEEEEeh-hhHH
Confidence 110 0001100011111111 11133334467899999999988765532 22332222 7888888 5432
Q ss_pred H-Hhhhh--chHHHHHHHHHHHHHHHHHhccEEEEcChhhhccCCCc-----cccc--------------c------ccC
Q 008544 200 Y-VKREK--NDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYPNSI-----VCNV--------------H------GVN 251 (562)
Q Consensus 200 ~-~~~~~--~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~-----~~~v--------------~------GVd 251 (562)
. ..... .....-.+.+...+++.+. ||.-+|+++++++...+. .... | +-|
T Consensus 142 sl~l~~~~g~~h~lV~l~~~~E~~fgk~-a~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps~~~~l~~~H~lf~~l~~d 220 (444)
T KOG2941|consen 142 SLQLKLKLGFQHPLVRLVRWLEKYFGKL-ADYNLCVTKAMREDLIQNWGINRAKVLYDRPPSKPTPLDEQHELFMKLAGD 220 (444)
T ss_pred HHHHHhhcCCCCchHHHHHHHHHHhhcc-cccchhhHHHHHHHHHHhcCCceeEEEecCCCCCCCchhHHHHHHhhhccc
Confidence 1 11111 1111233555666666666 999999999998621100 0000 0 111
Q ss_pred CCCcCc---chhhhH----Hhh------cCCCCCccEEEEEeeccccCCHHHHHHHHHHHHH-------hcCCcEEEEEe
Q 008544 252 PKFLEI---GEKKME----QQQ------NGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHK-------ELAGLEMDLYG 311 (562)
Q Consensus 252 ~~~~~~---~~~~~~----~~~------~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~-------~~~~~~l~ivG 311 (562)
...|.. ..+... -.+ ...+....+++..-...+..++..|++|+....+ ..|.+-++|.|
T Consensus 221 ~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITG 300 (444)
T KOG2941|consen 221 HSPFRAREPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITG 300 (444)
T ss_pred cchhhhcccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcC
Confidence 111110 000000 000 0011222344444567788999999999985422 24778899999
Q ss_pred CCCCHHHHHHHHHhcCCe-eEE---eCCCCChHHHHhhcCE--EEEccC-CCCCcHHHHHHHHcCCcEEeeCCCC-cccc
Q 008544 312 NGEDFDQIQRAAKKLKLV-VRV---YPGRDHADPIFHDYKV--FLNPST-TDVVCTATAEALAMGKIVVCANHPS-NDFF 383 (562)
Q Consensus 312 ~g~~~~~l~~~~~~l~l~-~~~---~~~~~~~~~l~~~adv--~v~pS~-~E~~~~~~lEAma~G~PVI~t~~~~-~e~v 383 (562)
.||.++.+.+.+++.+.+ +.+ +...+|.+.+++.||+ ++++|. .=..|+++++...||+||++-+... .|++
T Consensus 301 KGPlkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELV 380 (444)
T KOG2941|consen 301 KGPLKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELV 380 (444)
T ss_pred CCchhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHH
Confidence 999999999999998876 344 4557788899999994 555554 3348999999999999999999998 9999
Q ss_pred ccCCceEeeCCHHHHHHHHHHHHhCCCC------CccHHHH--hcCCHHHHHHHHHH
Q 008544 384 KQFPNCRTYDGRNGFVEATLKALAEEPA------QPTDAQT--HQLSWESATERFLQ 432 (562)
Q Consensus 384 ~~~~~g~~~~d~~~la~~i~~ll~~~~~------~l~~~ar--~~~sw~~~~~~~~~ 432 (562)
++++||++++|.+++++.+..++++-+. .+.++.+ ++..|+..-++...
T Consensus 381 kh~eNGlvF~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~e~RW~~~W~~~~~ 437 (444)
T KOG2941|consen 381 KHGENGLVFEDSEELAEQLQMLFKNFPDNADELNQLKKNLREEQELRWDESWERTAL 437 (444)
T ss_pred hcCCCceEeccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHHhhhHHHHHHHhhh
Confidence 9999999999999999999999995443 4555555 67778777666543
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.7e-15 Score=153.20 Aligned_cols=236 Identities=13% Similarity=0.018 Sum_probs=142.6
Q ss_pred HhhcCcCCC-cEEEecCCchhhh-h-hch-HHHHhhcCCEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEE
Q 008544 154 TEIIPDEEA-DIAVLEEPEHLTW-F-HHG-KRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKV 229 (562)
Q Consensus 154 ~~~i~~~~p-DvV~~~~~~~~~~-~-~~~-~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 229 (562)
..++...++ |+||++.|..... + ... ..+.+.-.|++.++|+.++.... .... . .....++.+. ||.+
T Consensus 56 ~~~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~--~~~~----~-~~~~~~~~~~-aD~i 127 (333)
T PRK09814 56 DGILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFD--SNYY----L-MKEEIDMLNL-ADVL 127 (333)
T ss_pred HHHHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhcc--ccch----h-hHHHHHHHHh-CCEE
Confidence 344555666 9999999876542 1 111 12232223899999987654221 1111 1 2223333343 8999
Q ss_pred EEcChhhhccCCCc-cccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEE
Q 008544 230 IRLSAATQEYPNSI-VCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMD 308 (562)
Q Consensus 230 i~~S~~~~~~~~~~-~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ 308 (562)
|++|+.+++...+. +....-++...+......... ......+.++|+|++...+++ ....++++|+
T Consensus 128 I~~S~~~~~~l~~~g~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~i~yaG~l~k~~~l----------~~~~~~~~l~ 194 (333)
T PRK09814 128 IVHSKKMKDRLVEEGLTTDKIIVQGIFDYLNDIELV---KTPSFQKKINFAGNLEKSPFL----------KNWSQGIKLT 194 (333)
T ss_pred EECCHHHHHHHHHcCCCcCceEeccccccccccccc---ccccCCceEEEecChhhchHH----------HhcCCCCeEE
Confidence 99999998854322 111010111222211100000 112235689999999843221 1134689999
Q ss_pred EEeCCCCHHHHHHHHHhcCCeeEEeCCCCCh--HHHHhhcCEEEEcc-C----------CCCCcHHHHHHHHcCCcEEee
Q 008544 309 LYGNGEDFDQIQRAAKKLKLVVRVYPGRDHA--DPIFHDYKVFLNPS-T----------TDVVCTATAEALAMGKIVVCA 375 (562)
Q Consensus 309 ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~--~~l~~~adv~v~pS-~----------~E~~~~~~lEAma~G~PVI~t 375 (562)
++|+|+..+ ....++.+.|..+.. .++|+. |+.+.+. . .-.+|.++.|+||||+|||++
T Consensus 195 i~G~g~~~~-------~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~ 266 (333)
T PRK09814 195 VFGPNPEDL-------ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVW 266 (333)
T ss_pred EECCCcccc-------ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEEC
Confidence 999998654 222346666654433 366776 6444432 1 125899999999999999999
Q ss_pred CCCC-ccccccCCceEeeCCHHHHHHHHHHHHhCCCCCccHHHH
Q 008544 376 NHPS-NDFFKQFPNCRTYDGRNGFVEATLKALAEEPAQPTDAQT 418 (562)
Q Consensus 376 ~~~~-~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~~l~~~ar 418 (562)
+.++ .+++.++.+|+++++.+++++++.++..+.-.+|+++++
T Consensus 267 ~~~~~~~~V~~~~~G~~v~~~~el~~~l~~~~~~~~~~m~~n~~ 310 (333)
T PRK09814 267 SKAAIADFIVENGLGFVVDSLEELPEIIDNITEEEYQEMVENVK 310 (333)
T ss_pred CCccHHHHHHhCCceEEeCCHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 9887 999999999999999999999999854322226777665
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.1e-16 Score=139.06 Aligned_cols=131 Identities=24% Similarity=0.280 Sum_probs=94.6
Q ss_pred ccEEEEEeeccccCCHHHHHH-HHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEE
Q 008544 273 TKGAYYIGRMVWSKGYEELLG-LLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLN 351 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~-a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~ 351 (562)
...++++|++.+.|+++.+++ +++++.++.|+++|.++|.+++ ++++. . ..++++++..++..++++.||+++.
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--~l~~~-~--~~~v~~~g~~~e~~~~l~~~dv~l~ 76 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--ELKRL-R--RPNVRFHGFVEELPEILAAADVGLI 76 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---HHCCH-H--HCTEEEE-S-HHHHHHHHC-SEEEE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--HHHHh-c--CCCEEEcCCHHHHHHHHHhCCEEEE
Confidence 357889999999999999999 9999999999999999999776 34444 1 2267887777677799999999999
Q ss_pred ccC-CCCCcHHHHHHHHcCCcEEeeCCCCccccccCCce-EeeCCHHHHHHHHHHHHhC
Q 008544 352 PST-TDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNC-RTYDGRNGFVEATLKALAE 408 (562)
Q Consensus 352 pS~-~E~~~~~~lEAma~G~PVI~t~~~~~e~v~~~~~g-~~~~d~~~la~~i~~ll~~ 408 (562)
|+. .+++|++++|||++|+|||+++.+..+++.....+ ++.+|+++++++|.++++|
T Consensus 77 p~~~~~~~~~k~~e~~~~G~pvi~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 77 PSRFNEGFPNKLLEAMAAGKPVIASDNGAEGIVEEDGCGVLVANDPEELAEAIERLLND 135 (135)
T ss_dssp -BSS-SCC-HHHHHHHCTT--EEEEHHHCHCHS---SEEEE-TT-HHHHHHHHHHHHH-
T ss_pred EeeCCCcCcHHHHHHHHhCCCEEECCcchhhheeecCCeEEECCCHHHHHHHHHHHhcC
Confidence 985 77899999999999999999998555565544444 4457999999999999876
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.7e-14 Score=143.92 Aligned_cols=206 Identities=20% Similarity=0.267 Sum_probs=153.6
Q ss_pred ccEEEEcChhhhccC-----CC-ccccccccCCCCcCcchhhhHHhhcCCCCC--ccEEEEEeeccccCCHHHHHHHHHH
Q 008544 226 CHKVIRLSAATQEYP-----NS-IVCNVHGVNPKFLEIGEKKMEQQQNGNKAF--TKGAYYIGRMVWSKGYEELLGLLNI 297 (562)
Q Consensus 226 ad~vi~~S~~~~~~~-----~~-~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~--~~~il~vGr~~~~Kg~~~ll~a~~~ 297 (562)
.+.++..+....... .. .....++++...+... ......+ ...++++|++.+.||++.+++++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~ 223 (381)
T COG0438 151 ADRVIAVSPALKELLEALGVPNKIVVIPNGIDTEKFAPA-------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAK 223 (381)
T ss_pred ccEEEECCHHHHHHHHHhCCCCCceEecCCcCHHHcCcc-------ccCCCcccCceEEEEeeccChhcCHHHHHHHHHH
Confidence 578888887664421 11 1122235665544431 1122222 3689999999999999999999999
Q ss_pred HHHhcCCcEEEEEeCCCC-HHHHHHHHHhcCC--eeEEeCCCC--ChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcE
Q 008544 298 YHKELAGLEMDLYGNGED-FDQIQRAAKKLKL--VVRVYPGRD--HADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIV 372 (562)
Q Consensus 298 l~~~~~~~~l~ivG~g~~-~~~l~~~~~~l~l--~~~~~~~~~--~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PV 372 (562)
+....+++.+.++|.++. .+.+...+.+.+. .+.+.+... +...+++.+|++++||..|++|++++|||++|+||
T Consensus 224 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pv 303 (381)
T COG0438 224 LKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPV 303 (381)
T ss_pred hhhhcCCeEEEEEcCCCccHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcCCcE
Confidence 998877799999999887 3666667777664 244544444 45578888999999998899999999999999999
Q ss_pred EeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH----hcCCHHHHHHHHHHHHHhcC
Q 008544 373 VCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT----HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 373 I~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw~~~~~~~~~~y~~~~ 438 (562)
|+++.++ .+++.++.+|++++ |.+++++++..++++... .++++++ ..|+|+...+++.+.+....
T Consensus 304 i~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (381)
T COG0438 304 IASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELL 378 (381)
T ss_pred EECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 9999986 88888877677654 589999999999998832 4443222 68999999999999887654
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.4e-13 Score=141.12 Aligned_cols=204 Identities=11% Similarity=0.035 Sum_probs=128.8
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccE
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHK 228 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 228 (562)
+..+.+.+++++||+|++.+....++. ....++..+ |++.++. -..+... ...++.+.+. ||+
T Consensus 78 ~~~~~~~l~~~kPd~vi~~g~~~~~~~--~a~aa~~~gip~v~~i~--P~~waw~-----------~~~~r~l~~~-~d~ 141 (385)
T TIGR00215 78 RKEVVQLAKQAKPDLLVGIDAPDFNLT--KELKKKDPGIKIIYYIS--PQVWAWR-----------KWRAKKIEKA-TDF 141 (385)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCccHH--HHHHHhhCCCCEEEEeC--CcHhhcC-----------cchHHHHHHH-HhH
Confidence 446788899999999999986444433 122333334 6664432 1111110 1114445554 899
Q ss_pred EEEcChhhhccCCCc----cccccccCCCCcCc-chhhhHHhhcCCCCCccEEEEEe--eccc-cCCHHHHHHHHHHHHH
Q 008544 229 VIRLSAATQEYPNSI----VCNVHGVNPKFLEI-GEKKMEQQQNGNKAFTKGAYYIG--RMVW-SKGYEELLGLLNIYHK 300 (562)
Q Consensus 229 vi~~S~~~~~~~~~~----~~~v~GVd~~~~~~-~~~~~~~~~~~~~~~~~~il~vG--r~~~-~Kg~~~ll~a~~~l~~ 300 (562)
+++.++..+++..+. ....|++....... ..+...++..+++++.++|+++| |..+ .|++..+++++..+.+
T Consensus 142 v~~~~~~e~~~~~~~g~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~ 221 (385)
T TIGR00215 142 LLAILPFEKAFYQKKNVPCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQ 221 (385)
T ss_pred hhccCCCcHHHHHhcCCCEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHH
Confidence 999998877753321 11113332122111 12233345567777777776553 5555 7899999999999988
Q ss_pred hcCCcEEEEEe-CCCCHHHHHHHHHhcCCe--eEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeC
Q 008544 301 ELAGLEMDLYG-NGEDFDQIQRAAKKLKLV--VRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCAN 376 (562)
Q Consensus 301 ~~~~~~l~ivG-~g~~~~~l~~~~~~l~l~--~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~ 376 (562)
..|++++++.+ .+...+.+++..+.++.. +.++.+ +..++|+.||++|.+| |.+++|+|+||+|+|...
T Consensus 222 ~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~y 293 (385)
T TIGR00215 222 QEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLIDG--DARKAMFAADAALLAS-----GTAALEAALIKTPMVVGY 293 (385)
T ss_pred hCCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEECc--hHHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEE
Confidence 88999887754 444566667666665433 334433 5668999999999999 778889999999999884
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.5e-13 Score=141.76 Aligned_cols=160 Identities=14% Similarity=0.070 Sum_probs=122.0
Q ss_pred CccEEEEEeeccccCCHHHHHHHHHHHHHhcCC----cEEEEEeCCC-----C----HHHHHHHHHhcCC--------ee
Q 008544 272 FTKGAYYIGRMVWSKGYEELLGLLNIYHKELAG----LEMDLYGNGE-----D----FDQIQRAAKKLKL--------VV 330 (562)
Q Consensus 272 ~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~----~~l~ivG~g~-----~----~~~l~~~~~~l~l--------~~ 330 (562)
+.++|++++|+++.||+...++|++++.+++|+ ++|+++|.+. + ..++++++.+.+. .+
T Consensus 284 ~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv 363 (487)
T TIGR02398 284 GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPL 363 (487)
T ss_pred CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccE
Confidence 478999999999999999999999999999996 6899998753 1 2455555555421 13
Q ss_pred EEeCCC---CChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCC----cEEeeCCCC-ccccccCCceEeeC--CHHHHHH
Q 008544 331 RVYPGR---DHADPIFHDYKVFLNPSTTDVVCTATAEALAMGK----IVVCANHPS-NDFFKQFPNCRTYD--GRNGFVE 400 (562)
Q Consensus 331 ~~~~~~---~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~----PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~ 400 (562)
.++.+. ++...+|+.||+++.||..||++++..|+|||+. |+|.|+..| .+.+ .++++++ |++++++
T Consensus 364 ~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l---~~AllVNP~d~~~~A~ 440 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL---KGALLTNPYDPVRMDE 440 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchhhc---CCCEEECCCCHHHHHH
Confidence 444443 3344899999999999999999999999999998 999999987 5554 3567775 9999999
Q ss_pred HHHHHHhCCCC-C---ccHHHH--hcCCHHHHHHHHHHHH
Q 008544 401 ATLKALAEEPA-Q---PTDAQT--HQLSWESATERFLQVA 434 (562)
Q Consensus 401 ~i~~ll~~~~~-~---l~~~ar--~~~sw~~~~~~~~~~y 434 (562)
+|.++++.+.. + +.+... ..++-..-++.+++..
T Consensus 441 ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l 480 (487)
T TIGR02398 441 TIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAV 480 (487)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 99999998875 2 221111 5666666666666544
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.5e-11 Score=134.00 Aligned_cols=166 Identities=10% Similarity=0.065 Sum_probs=127.9
Q ss_pred CCCCccEEEEEeeccccCCHHHHHHHHHHHHH--hc--CCcEEEEEeCCCC--------HHHHHHHHHh--cCCeeEEeC
Q 008544 269 NKAFTKGAYYIGRMVWSKGYEELLGLLNIYHK--EL--AGLEMDLYGNGED--------FDQIQRAAKK--LKLVVRVYP 334 (562)
Q Consensus 269 ~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~--~~--~~~~l~ivG~g~~--------~~~l~~~~~~--l~l~~~~~~ 334 (562)
..++.+++.+++|+..+||.+++++++.++.+ .. .++++++.|.+.. .+.+.+.+++ ...++.|+.
T Consensus 385 ~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~ 464 (601)
T TIGR02094 385 LDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLE 464 (601)
T ss_pred cCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEc
Confidence 34567799999999999999999999988875 22 3699999999763 3455555555 344566777
Q ss_pred CCCChH--HHHhhcCEEEE-ccC-CCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--------------CH
Q 008544 335 GRDHAD--PIFHDYKVFLN-PST-TDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--------------GR 395 (562)
Q Consensus 335 ~~~~~~--~l~~~adv~v~-pS~-~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--------------d~ 395 (562)
+++..- .+++.+|++++ ||. .|..|++-+=||..|.+.+++--|. .|.. ++.|||.+. |.
T Consensus 465 ~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~~~d~~da 543 (601)
T TIGR02094 465 NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEEEQDRLDA 543 (601)
T ss_pred CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccccccccCCCH
Confidence 765444 88999999999 998 9999999999999999999997665 5554 678999864 67
Q ss_pred HHHHHHHHHHH-----hCCC-----C--CccHHHH-h---cCCHHHHHHHHHHHHH
Q 008544 396 NGFVEATLKAL-----AEEP-----A--QPTDAQT-H---QLSWESATERFLQVAE 435 (562)
Q Consensus 396 ~~la~~i~~ll-----~~~~-----~--~l~~~ar-~---~~sw~~~~~~~~~~y~ 435 (562)
++|.++|++.+ +++. . .|.+++. . .|||++++++|.+.|-
T Consensus 544 ~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 544 EALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY 599 (601)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence 78999887655 2222 1 4555555 3 6999999999999873
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.7e-13 Score=143.31 Aligned_cols=157 Identities=11% Similarity=0.117 Sum_probs=130.7
Q ss_pred ccEEEEEe--eccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCH---HHHHHHHHhcCCe------------------
Q 008544 273 TKGAYYIG--RMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDF---DQIQRAAKKLKLV------------------ 329 (562)
Q Consensus 273 ~~~il~vG--r~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~---~~l~~~~~~l~l~------------------ 329 (562)
...+++++ |+ +.|.++.+|+++.++..+.|+++|.+.|.+.+. +.+++.++++++.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 397 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQP 397 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhh
Confidence 34677888 99 999999999999999999999999999987643 5665665555333
Q ss_pred -----------eEE-e-CCCC--ChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCCccccccCCceEeeCC
Q 008544 330 -----------VRV-Y-PGRD--HADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDG 394 (562)
Q Consensus 330 -----------~~~-~-~~~~--~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~~e~v~~~~~g~~~~d 394 (562)
.++ + +... ++.+.|..+.++|.+|..|+|+ +.+||++.|+|+| +.+..++|.++.||++++|
T Consensus 398 ~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI--nyg~~~~V~d~~NG~li~d 474 (519)
T TIGR03713 398 ILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI--NKVETDYVEHNKNGYIIDD 474 (519)
T ss_pred cccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee--ecCCceeeEcCCCcEEeCC
Confidence 333 3 4355 6779999999999999999999 9999999999999 5566999999999999999
Q ss_pred HHHHHHHHHHHHhCCCC--CccHHHH---hcCCHHHHHHHHHHH
Q 008544 395 RNGFVEATLKALAEEPA--QPTDAQT---HQLSWESATERFLQV 433 (562)
Q Consensus 395 ~~~la~~i~~ll~~~~~--~l~~~ar---~~~sw~~~~~~~~~~ 433 (562)
.++|++++..+|.++.. ++...+. ++||-+++.+++.+.
T Consensus 475 ~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 475 ISELLKALDYYLDNLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 99999999999999865 5555554 788888888777653
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-11 Score=139.23 Aligned_cols=262 Identities=10% Similarity=0.009 Sum_probs=164.2
Q ss_pred CcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhc-
Q 008544 162 ADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQE- 238 (562)
Q Consensus 162 pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~- 238 (562)
-|+|.+|....+ .+ ...+..+.. ++-+.+|..|+...-..-.. ..+.+.+-+. .||.|=..+.....
T Consensus 232 gD~VWVHDYHL~-Ll--P~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP-----~r~elL~glL--~aDlIGFqT~~y~rh 301 (934)
T PLN03064 232 GDVVWCHDYHLM-FL--PKCLKEYNSNMKVGWFLHTPFPSSEIHRTLP-----SRSELLRSVL--AADLVGFHTYDYARH 301 (934)
T ss_pred CCEEEEecchhh-HH--HHHHHHhCCCCcEEEEecCCCCChHHHhhCC-----cHHHHHHHHh--cCCeEEeCCHHHHHH
Confidence 379999986544 33 333444433 67778888877644221111 1111212222 25766666644433
Q ss_pred cC------------------CCcccc----ccccCCCCcCcchhh--------hHHhhcCCCCCccEEEEEeeccccCCH
Q 008544 239 YP------------------NSIVCN----VHGVNPKFLEIGEKK--------MEQQQNGNKAFTKGAYYIGRMVWSKGY 288 (562)
Q Consensus 239 ~~------------------~~~~~~----v~GVd~~~~~~~~~~--------~~~~~~~~~~~~~~il~vGr~~~~Kg~ 288 (562)
+. ....+. ..|||++.|...... ..+... .+.++|+.++|+++.||+
T Consensus 302 Fl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~---~g~kiIlgVDRLD~~KGI 378 (934)
T PLN03064 302 FVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERF---AGRKVMLGVDRLDMIKGI 378 (934)
T ss_pred HHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHh---CCceEEEEeeccccccCH
Confidence 10 011111 138888766432111 111112 246799999999999999
Q ss_pred HHHHHHHHHHHHhcCCcE--EEEE-------eCCCCHHHHH----HHHHhcCC--------eeEEeCC---CCChHHHHh
Q 008544 289 EELLGLLNIYHKELAGLE--MDLY-------GNGEDFDQIQ----RAAKKLKL--------VVRVYPG---RDHADPIFH 344 (562)
Q Consensus 289 ~~ll~a~~~l~~~~~~~~--l~iv-------G~g~~~~~l~----~~~~~l~l--------~~~~~~~---~~~~~~l~~ 344 (562)
...+.|++++.+++|+++ ++++ +++++.++++ +++.+.+. .+.++.. .++...+|+
T Consensus 379 ~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~ 458 (934)
T PLN03064 379 PQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYA 458 (934)
T ss_pred HHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHH
Confidence 999999999999999864 6666 4444444433 33333321 1333222 334448999
Q ss_pred hcCEEEEccCCCCCcHHHHHHHHcCC----cEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC---Ccc
Q 008544 345 DYKVFLNPSTTDVVCTATAEALAMGK----IVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA---QPT 414 (562)
Q Consensus 345 ~adv~v~pS~~E~~~~~~lEAma~G~----PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~---~l~ 414 (562)
.||+++.||..||++++..|||||+. ++|.|+..| .+.+ +.++++++ |+++++++|.++++.+.. .+.
T Consensus 459 ~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~ 536 (934)
T PLN03064 459 VTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVAASIAQALNMPEEEREKRH 536 (934)
T ss_pred hCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh--CCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999999999999999999944 444477776 6666 44677775 999999999999996553 222
Q ss_pred HHHH---hcCCHHHHHHHHHHHHHhcC
Q 008544 415 DAQT---HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 415 ~~ar---~~~sw~~~~~~~~~~y~~~~ 438 (562)
++.+ ..++|...++.+++..+.+.
T Consensus 537 ~~~~~~V~~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 537 RHNFMHVTTHTAQEWAETFVSELNDTV 563 (934)
T ss_pred HHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence 2232 78899999999887766554
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.6e-11 Score=101.15 Aligned_cols=85 Identities=24% Similarity=0.366 Sum_probs=78.1
Q ss_pred EEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeCCHHHHHHHHHHHHhCCCC--CccHHHH----hc
Q 008544 348 VFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYDGRNGFVEATLKALAEEPA--QPTDAQT----HQ 420 (562)
Q Consensus 348 v~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~--~l~~~ar----~~ 420 (562)
++++|+..++++..++|+||||+|||+++.++ .+++.++..++.++|++++.+++..+++|+++ +++++++ ++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~~~ 80 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYNDPEELAEKIEYLLENPEERRRIAKNARERVLKR 80 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHh
Confidence 46889999999999999999999999999987 88899999999999999999999999999987 7888877 79
Q ss_pred CCHHHHHHHHHH
Q 008544 421 LSWESATERFLQ 432 (562)
Q Consensus 421 ~sw~~~~~~~~~ 432 (562)
|+|+..++++++
T Consensus 81 ~t~~~~~~~il~ 92 (92)
T PF13524_consen 81 HTWEHRAEQILE 92 (92)
T ss_pred CCHHHHHHHHHC
Confidence 999999999874
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.9e-09 Score=111.40 Aligned_cols=250 Identities=12% Similarity=0.047 Sum_probs=135.3
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEE
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKV 229 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 229 (562)
..+..+++++.+||+||.+..+... ...++.++..+-..+|+.... . ...++.+.++ ++++
T Consensus 80 ~~~~~~i~~~~kPdvvi~~Ggy~s~----p~~~aa~~~~~p~~i~e~n~~------~--------g~~nr~~~~~-a~~v 140 (352)
T PRK12446 80 VMDAYVRIRKLKPDVIFSKGGFVSV----PVVIGGWLNRVPVLLHESDMT------P--------GLANKIALRF-ASKI 140 (352)
T ss_pred HHHHHHHHHhcCCCEEEecCchhhH----HHHHHHHHcCCCEEEECCCCC------c--------cHHHHHHHHh-hCEE
Confidence 4456677899999999998765431 112333333333344543211 0 1123344454 7877
Q ss_pred EEcChhhhc-cCCCcccccccc--CCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHH-HHHHHHHHHhcCCc
Q 008544 230 IRLSAATQE-YPNSIVCNVHGV--NPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEEL-LGLLNIYHKELAGL 305 (562)
Q Consensus 230 i~~S~~~~~-~~~~~~~~v~GV--d~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~l-l~a~~~l~~~~~~~ 305 (562)
++.-+...+ ++.+.+. +.|. ...+.... +.......+.+++.++|+.+|.-.-.+.+..+ .+++..+. .++
T Consensus 141 ~~~f~~~~~~~~~~k~~-~tG~Pvr~~~~~~~-~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~ 215 (352)
T PRK12446 141 FVTFEEAAKHLPKEKVI-YTGSPVREEVLKGN-REKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL---LKY 215 (352)
T ss_pred EEEccchhhhCCCCCeE-EECCcCCccccccc-chHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCc
Confidence 665444433 3333322 2343 33443322 22233445666667777776654334444332 23333332 246
Q ss_pred EEEEE-eCCCCHHHHHHHHHhcCCeeEEeCCC-CChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCC-----
Q 008544 306 EMDLY-GNGEDFDQIQRAAKKLKLVVRVYPGR-DHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHP----- 378 (562)
Q Consensus 306 ~l~iv-G~g~~~~~l~~~~~~l~l~~~~~~~~-~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~----- 378 (562)
++++. |.. +.++... ... ...+++.. +++.++|+.||++|.- +-++++.|++++|+|.|.-..+
T Consensus 216 ~vv~~~G~~-~~~~~~~---~~~-~~~~~~f~~~~m~~~~~~adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~~~~~ 286 (352)
T PRK12446 216 QIVHLCGKG-NLDDSLQ---NKE-GYRQFEYVHGELPDILAITDFVISR----AGSNAIFEFLTLQKPMLLIPLSKFASR 286 (352)
T ss_pred EEEEEeCCc-hHHHHHh---hcC-CcEEecchhhhHHHHHHhCCEEEEC----CChhHHHHHHHcCCCEEEEcCCCCCCC
Confidence 66554 432 2222221 111 23445555 5788999999998854 4588999999999999988432
Q ss_pred C-----ccccccCCceEeeC----CHHHHHHHHHHHHhCCCCCccHHHHhcCCHHHHHHHHHHHH
Q 008544 379 S-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPAQPTDAQTHQLSWESATERFLQVA 434 (562)
Q Consensus 379 ~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~~l~~~ar~~~sw~~~~~~~~~~y 434 (562)
+ .+.+.+...+.... +++.+.+++.++++|++. +.+ ..+.+.....++++.+..
T Consensus 287 ~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~-~~~-~~~~~~~~~aa~~i~~~i 349 (352)
T PRK12446 287 GDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEK-YKT-ALKKYNGKEAIQTIIDHI 349 (352)
T ss_pred chHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHH-HHH-HHHHcCCCCHHHHHHHHH
Confidence 1 33445555555542 688999999999876543 222 223344445555555543
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.2e-09 Score=108.87 Aligned_cols=239 Identities=16% Similarity=0.132 Sum_probs=145.1
Q ss_pred hHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhcc
Q 008544 149 AVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCH 227 (562)
Q Consensus 149 ~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 227 (562)
...+.++.+++.+||+|+....+... .....+...+ |++....+..+. ..+++..+. ++
T Consensus 79 ~~~~a~~il~~~kPd~vig~Ggyvs~---P~~~Aa~~~~iPv~ihEqn~~~G----------------~ank~~~~~-a~ 138 (357)
T COG0707 79 GVLQARKILKKLKPDVVIGTGGYVSG---PVGIAAKLLGIPVIIHEQNAVPG----------------LANKILSKF-AK 138 (357)
T ss_pred HHHHHHHHHHHcCCCEEEecCCcccc---HHHHHHHhCCCCEEEEecCCCcc----------------hhHHHhHHh-hc
Confidence 35567888999999999998776551 1122333333 555444322211 224445554 66
Q ss_pred EEEEcChhhhccCCC-ccccc-cccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcC-C
Q 008544 228 KVIRLSAATQEYPNS-IVCNV-HGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELA-G 304 (562)
Q Consensus 228 ~vi~~S~~~~~~~~~-~~~~v-~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~-~ 304 (562)
.|.+.-+....+..+ ....+ +.|..++.. ......+ ..+.. +.++|+.+|.-. |...+-+++..+..... +
T Consensus 139 ~V~~~f~~~~~~~~~~~~~~tG~Pvr~~~~~-~~~~~~~-~~~~~-~~~~ilV~GGS~---Ga~~ln~~v~~~~~~l~~~ 212 (357)
T COG0707 139 KVASAFPKLEAGVKPENVVVTGIPVRPEFEE-LPAAEVR-KDGRL-DKKTILVTGGSQ---GAKALNDLVPEALAKLANR 212 (357)
T ss_pred eeeeccccccccCCCCceEEecCcccHHhhc-cchhhhh-hhccC-CCcEEEEECCcc---hhHHHHHHHHHHHHHhhhC
Confidence 666554443443332 12111 234445543 2221111 12112 467777776533 44444444444433333 4
Q ss_pred cEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCC-C----
Q 008544 305 LEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHP-S---- 379 (562)
Q Consensus 305 ~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~-~---- 379 (562)
++++...+..+.+++++...+++. .++.+..+++.++|+.+|++|.= .-++++.|.+++|+|+|--..+ +
T Consensus 213 ~~v~~~~G~~~~~~~~~~~~~~~~-~~v~~f~~dm~~~~~~ADLvIsR----aGa~Ti~E~~a~g~P~IliP~p~~~~~~ 287 (357)
T COG0707 213 IQVIHQTGKNDLEELKSAYNELGV-VRVLPFIDDMAALLAAADLVISR----AGALTIAELLALGVPAILVPYPPGADGH 287 (357)
T ss_pred eEEEEEcCcchHHHHHHHHhhcCc-EEEeeHHhhHHHHHHhccEEEeC----CcccHHHHHHHhCCCEEEeCCCCCccch
Confidence 666665543336777777777776 77888899999999999999954 3579999999999999887554 2
Q ss_pred ----ccccccCCceEeeC----CHHHHHHHHHHHHhCCCC--CccHHHH
Q 008544 380 ----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPA--QPTDAQT 418 (562)
Q Consensus 380 ----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~--~l~~~ar 418 (562)
...+.+...+.+++ +++.+.+.|.+++++++. .|.++++
T Consensus 288 Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~ 336 (357)
T COG0707 288 QEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAK 336 (357)
T ss_pred HHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 34556667777764 567999999999998665 7766666
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.6e-09 Score=114.36 Aligned_cols=103 Identities=11% Similarity=0.041 Sum_probs=68.0
Q ss_pred ChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----cccccc-CCceE-eeC----CHHHHHHHHHHHH
Q 008544 338 HADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQ-FPNCR-TYD----GRNGFVEATLKAL 406 (562)
Q Consensus 338 ~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~-~~~g~-~~~----d~~~la~~i~~ll 406 (562)
+..+++..||+.|+||++|++|.+.+|+.++|+|.|+|+..| .+.+.+ ...|. +++ +.++.++.|.+.+
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l 541 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFL 541 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 445999999999999999999999999999999999999876 344432 23444 332 6666555555554
Q ss_pred h----CCCC---CccHHHH---hcCCHHHHHHHHHHHHHhcCcc
Q 008544 407 A----EEPA---QPTDAQT---HQLSWESATERFLQVAELVGDV 440 (562)
Q Consensus 407 ~----~~~~---~l~~~ar---~~~sw~~~~~~~~~~y~~~~~~ 440 (562)
. .... .++.++. ..++|+.....|.++|+.+...
T Consensus 542 ~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL~~ 585 (633)
T PF05693_consen 542 YKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLALRR 585 (633)
T ss_dssp HHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 3 3322 2233333 8899999999999999988743
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.2e-08 Score=101.92 Aligned_cols=261 Identities=13% Similarity=0.126 Sum_probs=150.8
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||+|.+++..-...|--.+.+.+|+.|.++| ++|++++.... ......++.. .
T Consensus 1 ~i~ir~Da~~~iG~GHv~Rcl~LA~~l~~~g-~~v~f~~~~~~-----------------~~~~~~i~~~-----g---- 53 (279)
T TIGR03590 1 KILFRADASSEIGLGHVMRCLTLARALHAQG-AEVAFACKPLP-----------------GDLIDLLLSA-----G---- 53 (279)
T ss_pred CEEEEecCCccccccHHHHHHHHHHHHHHCC-CEEEEEeCCCC-----------------HHHHHHHHHc-----C----
Confidence 6899999986666677788899999998887 99999977210 1100111111 1
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchHHH
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQ 210 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~~ 210 (562)
+.+...+... ........+.+.+++.+||++++.+......+ ...++. ..+.+..+- ++....
T Consensus 54 ~~v~~~~~~~----~~~~d~~~~~~~l~~~~~d~vV~D~y~~~~~~--~~~~k~-~~~~l~~iD-D~~~~~--------- 116 (279)
T TIGR03590 54 FPVYELPDES----SRYDDALELINLLEEEKFDILIVDHYGLDADW--EKLIKE-FGRKILVID-DLADRP--------- 116 (279)
T ss_pred CeEEEecCCC----chhhhHHHHHHHHHhcCCCEEEEcCCCCCHHH--HHHHHH-hCCeEEEEe-cCCCCC---------
Confidence 1111111100 00001223667788889999999876433222 122222 234444443 221100
Q ss_pred HHHHHHHHHHHHHHhccEEEEcChhhhc--cC---CCccccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeecccc
Q 008544 211 AFLLEFVNSWLARVHCHKVIRLSAATQE--YP---NSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWS 285 (562)
Q Consensus 211 ~~~~~~~~~~~~~~~ad~vi~~S~~~~~--~~---~~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~ 285 (562)
..||.++-.+..... +. ........|.+.-.+.+.-....+......+...++++.|.....
T Consensus 117 -------------~~~D~vin~~~~~~~~~y~~~~~~~~~~l~G~~Y~~lr~eF~~~~~~~~~~~~~~~iLi~~GG~d~~ 183 (279)
T TIGR03590 117 -------------HDCDLLLDQNLGADASDYQGLVPANCRLLLGPSYALLREEFYQLATANKRRKPLRRVLVSFGGADPD 183 (279)
T ss_pred -------------cCCCEEEeCCCCcCHhHhcccCcCCCeEEecchHHhhhHHHHHhhHhhhcccccCeEEEEeCCcCCc
Confidence 037888877654222 11 111222336544332221111111111111224578899988887
Q ss_pred CCHHHHHHHHHHHHHhcCCcEE-EEEeCC-CCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHH
Q 008544 286 KGYEELLGLLNIYHKELAGLEM-DLYGNG-EDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATA 363 (562)
Q Consensus 286 Kg~~~ll~a~~~l~~~~~~~~l-~ivG~g-~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~l 363 (562)
+....+++++..+. +++++ +++|.+ +..+++++.++..+ ++++++..+++.++|+.||++|.+ .|.++.
T Consensus 184 ~~~~~~l~~l~~~~---~~~~i~vv~G~~~~~~~~l~~~~~~~~-~i~~~~~~~~m~~lm~~aDl~Is~-----~G~T~~ 254 (279)
T TIGR03590 184 NLTLKLLSALAESQ---INISITLVTGSSNPNLDELKKFAKEYP-NIILFIDVENMAELMNEADLAIGA-----AGSTSW 254 (279)
T ss_pred CHHHHHHHHHhccc---cCceEEEEECCCCcCHHHHHHHHHhCC-CEEEEeCHHHHHHHHHHCCEEEEC-----CchHHH
Confidence 76778888886543 34443 356765 44678888876644 577788888999999999999985 368999
Q ss_pred HHHHcCCcEEeeCC
Q 008544 364 EALAMGKIVVCANH 377 (562)
Q Consensus 364 EAma~G~PVI~t~~ 377 (562)
|++++|+|+|+-..
T Consensus 255 E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 255 ERCCLGLPSLAICL 268 (279)
T ss_pred HHHHcCCCEEEEEe
Confidence 99999999998755
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.2e-08 Score=111.44 Aligned_cols=165 Identities=12% Similarity=0.075 Sum_probs=121.2
Q ss_pred CCCccEEEEEeeccccCCHHHHHHHHHHHHHhc----CCcEEEEEeCCCC--H------HHHHHHHH--hcCCeeEEeCC
Q 008544 270 KAFTKGAYYIGRMVWSKGYEELLGLLNIYHKEL----AGLEMDLYGNGED--F------DQIQRAAK--KLKLVVRVYPG 335 (562)
Q Consensus 270 ~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~----~~~~l~ivG~g~~--~------~~l~~~~~--~l~l~~~~~~~ 335 (562)
.++..+|.|+.|+..+|+.++++..+.++.+-. .++++++.|.+.. . +.+.+.++ +...++.|+.+
T Consensus 475 dpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~ 554 (778)
T cd04299 475 DPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLED 554 (778)
T ss_pred CCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcC
Confidence 345668999999999999999999988885521 3599999999652 1 24444444 22335666677
Q ss_pred CCChH--HHHhhcCEEEEccC--CCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--------------CHH
Q 008544 336 RDHAD--PIFHDYKVFLNPST--TDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--------------GRN 396 (562)
Q Consensus 336 ~~~~~--~l~~~adv~v~pS~--~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--------------d~~ 396 (562)
++..- .+++.+|++++||+ .|..|++-+=||..|.+-+++--|- .|.. ++.|||.++ |.+
T Consensus 555 Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~~~~~~~d~~da~ 633 (778)
T cd04299 555 YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEYEDDEYQDAEEAE 633 (778)
T ss_pred CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccccChhhcchhhHH
Confidence 65443 88999999999999 9999999999999999999997775 5555 789999863 345
Q ss_pred HHHHHHHHHHh----CC------CC--CccHHHH----hcCCHHHHHHHHHHHHH
Q 008544 397 GFVEATLKALA----EE------PA--QPTDAQT----HQLSWESATERFLQVAE 435 (562)
Q Consensus 397 ~la~~i~~ll~----~~------~~--~l~~~ar----~~~sw~~~~~~~~~~y~ 435 (562)
+|.+.|++.+- +. .. +|-+++. ..|||.+++++|.+-|-
T Consensus 634 ~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 634 ALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 66677754332 32 22 4444444 48999999999987544
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.8e-07 Score=95.12 Aligned_cols=250 Identities=13% Similarity=0.039 Sum_probs=154.3
Q ss_pred HHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCC-EEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEE
Q 008544 153 ITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRF-VVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIR 231 (562)
Q Consensus 153 l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~-vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~ 231 (562)
+++++...+||++++.+.+.+.-+ .....++..| ++..-.-....+..+. +........+... |.|++
T Consensus 115 v~rFl~~~~P~l~Ii~EtElWPnl--i~e~~~~~~p~~LvNaRLS~rS~~~y~-------k~~~~~~~~~~~i--~li~a 183 (419)
T COG1519 115 VRRFLRKWRPKLLIIMETELWPNL--INELKRRGIPLVLVNARLSDRSFARYA-------KLKFLARLLFKNI--DLILA 183 (419)
T ss_pred HHHHHHhcCCCEEEEEeccccHHH--HHHHHHcCCCEEEEeeeechhhhHHHH-------HHHHHHHHHHHhc--ceeee
Confidence 677888899998777665444222 1112222224 3333322222233221 2233334444554 99999
Q ss_pred cChhhhccCCCc-c--ccccc---cCCCCcCcc--hhhhHHhhcCCCCCccEEEEEeeccccCCHH-HHHHHHHHHHHhc
Q 008544 232 LSAATQEYPNSI-V--CNVHG---VNPKFLEIG--EKKMEQQQNGNKAFTKGAYYIGRMVWSKGYE-ELLGLLNIYHKEL 302 (562)
Q Consensus 232 ~S~~~~~~~~~~-~--~~v~G---Vd~~~~~~~--~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~-~ll~a~~~l~~~~ 302 (562)
.|+..++.+.+. . +.+.| .|.+.-+.. .....+...+. ..++++..+. +.|=+ .+++++..+++++
T Consensus 184 Qse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~--~r~v~iaaST---H~GEeei~l~~~~~l~~~~ 258 (419)
T COG1519 184 QSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGG--HRPVWVAAST---HEGEEEIILDAHQALKKQF 258 (419)
T ss_pred cCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCC--CCceEEEecC---CCchHHHHHHHHHHHHhhC
Confidence 999888843221 1 11111 222221111 11112222222 2567666665 45554 5889999999999
Q ss_pred CCcEEEEEeCCCCH-HHHHHHHHhcCCeeEEeCC---------------CCChHHHHhhcCEE-EEccCCCCCcHHHHHH
Q 008544 303 AGLEMDLYGNGEDF-DQIQRAAKKLKLVVRVYPG---------------RDHADPIFHDYKVF-LNPSTTDVVCTATAEA 365 (562)
Q Consensus 303 ~~~~l~ivG~g~~~-~~l~~~~~~l~l~~~~~~~---------------~~~~~~l~~~adv~-v~pS~~E~~~~~~lEA 365 (562)
||..++++-..+++ +.+++++++.|+.+..... .-++..+|..+|+. |--|..+.-|--++|+
T Consensus 259 ~~~llIlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN~LEp 338 (419)
T COG1519 259 PNLLLILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHNPLEP 338 (419)
T ss_pred CCceEEEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCChhhH
Confidence 99999999998885 8899999999887543211 11233788899954 5558777779999999
Q ss_pred HHcCCcEEeeCCCC-----ccccccCCceEeeCCHHHHHHHHHHHHhCCCC--CccHHHH
Q 008544 366 LAMGKIVVCANHPS-----NDFFKQFPNCRTYDGRNGFVEATLKALAEEPA--QPTDAQT 418 (562)
Q Consensus 366 ma~G~PVI~t~~~~-----~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~--~l~~~ar 418 (562)
.++|+|||.-.+-. .+.+.+...++.++|.+.++.++..+++|+.. +|++++.
T Consensus 339 a~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~~~~l~~~v~~l~~~~~~r~~~~~~~~ 398 (419)
T COG1519 339 AAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVEDADLLAKAVELLLADEDKREAYGRAGL 398 (419)
T ss_pred HHcCCCEEeCCccccHHHHHHHHHhcCCeEEECCHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 99999999997753 44455667788999988888888888777554 5555554
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.96 E-value=7.3e-09 Score=109.17 Aligned_cols=126 Identities=11% Similarity=0.243 Sum_probs=104.7
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCC-HHHHHHHHHhcCCeeEEeCC-CC-ChHHHHhhcCEE
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGED-FDQIQRAAKKLKLVVRVYPG-RD-HADPIFHDYKVF 349 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~-~~~l~~~~~~l~l~~~~~~~-~~-~~~~l~~~adv~ 349 (562)
...++.++. +..|++++.+.++.|+++|.| |.+.+ ...|.++ .+. .++..+.+ .. +..++|..||++
T Consensus 282 ~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te~s~kL~~L-~~y-~nvvly~~~~~~~l~~ly~~~dly 351 (438)
T TIGR02919 282 RKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTEMSSKLMSL-DKY-DNVKLYPNITTQKIQELYQTCDIY 351 (438)
T ss_pred cccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCcccHHHHHH-Hhc-CCcEEECCcChHHHHHHHHhccEE
Confidence 345666662 899999999999999999999 77766 6788887 666 35666666 44 677999999999
Q ss_pred EEccCCCCCcHHHHHHHHcCCcEEeeCCCC--ccccccCCceEee--CCHHHHHHHHHHHHhCCCC
Q 008544 350 LNPSTTDVVCTATAEALAMGKIVVCANHPS--NDFFKQFPNCRTY--DGRNGFVEATLKALAEEPA 411 (562)
Q Consensus 350 v~pS~~E~~~~~~lEAma~G~PVI~t~~~~--~e~v~~~~~g~~~--~d~~~la~~i~~ll~~~~~ 411 (562)
+..|..|++++++.||++.|+|||+.+... .+++.+ |.++ +|+++|+++|.+++.++..
T Consensus 352 Ldin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL~d~~~ 414 (438)
T TIGR02919 352 LDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLLNDPNQ 414 (438)
T ss_pred EEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHhcCHHH
Confidence 999999999999999999999999998873 677765 5554 5999999999999998864
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.6e-07 Score=99.19 Aligned_cols=121 Identities=17% Similarity=0.005 Sum_probs=75.6
Q ss_pred ccEEEEEeecccc---CCHHHHHHHHHHHHHhcCCcEE-EEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCE
Q 008544 273 TKGAYYIGRMVWS---KGYEELLGLLNIYHKELAGLEM-DLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKV 348 (562)
Q Consensus 273 ~~~il~vGr~~~~---Kg~~~ll~a~~~l~~~~~~~~l-~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv 348 (562)
..+++..|+.... +-...+++++. .. +.++ +..|...... .....++.+.+ +.+..+++..||+
T Consensus 240 ~~v~v~~Gs~~~~~~~~~~~~~~~a~~----~~-~~~~i~~~g~~~~~~------~~~~~~v~~~~-~~p~~~ll~~~d~ 307 (401)
T cd03784 240 PPVYVGFGSMVVRDPEALARLDVEAVA----TL-GQRAILSLGWGGLGA------EDLPDNVRVVD-FVPHDWLLPRCAA 307 (401)
T ss_pred CcEEEeCCCCcccCHHHHHHHHHHHHH----Hc-CCeEEEEccCccccc------cCCCCceEEeC-CCCHHHHhhhhhe
Confidence 4566677776442 23334444443 22 4454 4455543222 12222344433 3567789999999
Q ss_pred EEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC----CHHHHHHHHHHHHhCC
Q 008544 349 FLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEE 409 (562)
Q Consensus 349 ~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~ 409 (562)
+|.- +-..++.||+++|+|+|...... .+.+.+...|...+ +++++.+++.++++++
T Consensus 308 ~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~~~ 373 (401)
T cd03784 308 VVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERLAAALRRLLDPP 373 (401)
T ss_pred eeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHHHHHHHHHhCHH
Confidence 9933 44689999999999999996654 44455555566542 7899999999998853
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=98.83 E-value=6.2e-09 Score=95.74 Aligned_cols=167 Identities=19% Similarity=0.168 Sum_probs=84.3
Q ss_pred EEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCCccc
Q 008544 54 IFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTSTFDT 133 (562)
Q Consensus 54 ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i 133 (562)
+++..+.+..||++..+.+++++|.++| |+|+++++....... .. .. ..... ...
T Consensus 2 li~~~~~~~~GG~e~~~~~l~~~l~~~G-~~v~v~~~~~~~~~~----~~-------~~----------~~~~~---~~~ 56 (177)
T PF13439_consen 2 LITNIFLPNIGGAERVVLNLARALAKRG-HEVTVVSPGVKDPIE----EE-------LV----------KIFVK---IPY 56 (177)
T ss_dssp EEECC-TTSSSHHHHHHHHHHHHHHHTT--EEEEEESS-TTS-S----ST-------EE----------EE------TT-
T ss_pred EEEEecCCCCChHHHHHHHHHHHHHHCC-CEEEEEEcCCCccch----hh-------cc----------ceeee---eec
Confidence 4455566889999999999999999998 999999884311100 00 00 00000 000
Q ss_pred ccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHH-HHhhhhchHHHHH
Q 008544 134 RFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLE-YVKREKNDRLQAF 212 (562)
Q Consensus 134 ~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~-~~~~~~~~~~~~~ 212 (562)
.. . ............+.+.+++.+||+||++.+....+. ..... ..|.+.++|+.+.. .......... ..
T Consensus 57 ~~-~---~~~~~~~~~~~~~~~~i~~~~~DiVh~~~~~~~~~~---~~~~~-~~~~v~~~H~~~~~~~~~~~~~~~~-~~ 127 (177)
T PF13439_consen 57 PI-R---KRFLRSFFFMRRLRRLIKKEKPDIVHIHGPPAFWIA---LLACR-KVPIVYTIHGPYFERRFLKSKLSPY-SY 127 (177)
T ss_dssp SS-T---SS--HHHHHHHHHHHHHHHHT-SEEECCTTHCCCHH---HHHHH-CSCEEEEE-HHH--HHTTTTSCCCH-HH
T ss_pred cc-c---cccchhHHHHHHHHHHHHHcCCCeEEecccchhHHH---HHhcc-CCCEEEEeCCCcccccccccccchh-hh
Confidence 00 0 001112222445777888889999999987655222 11222 35899999976531 1111111111 11
Q ss_pred HHHHHHHHHHHHhccEEEEcChhhhcc------CCCcccc-ccccCCCCc
Q 008544 213 LLEFVNSWLARVHCHKVIRLSAATQEY------PNSIVCN-VHGVNPKFL 255 (562)
Q Consensus 213 ~~~~~~~~~~~~~ad~vi~~S~~~~~~------~~~~~~~-v~GVd~~~~ 255 (562)
+...+...+.+ .+|.++++|+.+++. +.+.+.. .||||.+.|
T Consensus 128 ~~~~~~~~~~~-~~~~ii~vS~~~~~~l~~~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 128 LNFRIERKLYK-KADRIIAVSESTKDELIKFGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHCTTHHHHC-CSSEEEESSHHHHHHHHHHT--SS-EEE----B-CCCH
T ss_pred hhhhhhhhHHh-cCCEEEEECHHHHHHHHHhCCcccCCEEEECCccHHHc
Confidence 22222222222 379999999988883 2333433 469998876
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.3e-07 Score=99.22 Aligned_cols=241 Identities=15% Similarity=0.023 Sum_probs=138.1
Q ss_pred hHHhhcCcC--CCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHh---------hhh-chHHHHHHHHHHHH
Q 008544 152 DITEIIPDE--EADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVK---------REK-NDRLQAFLLEFVNS 219 (562)
Q Consensus 152 ~l~~~i~~~--~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~---------~~~-~~~~~~~~~~~~~~ 219 (562)
.-.+.+++. +||+|+....... .+ .-|..+...++.-.|........ +++ .|.....+ . -++
T Consensus 82 ~~~~~~~~~~~~p~~v~~~Gg~v~-~~---aA~~~~~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~-e-~n~ 155 (396)
T TIGR03492 82 GQWRALRKWAKKGDLIVAVGDIVP-LL---FAWLSGKPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPW-E-RWL 155 (396)
T ss_pred HHHHHHHHHhhcCCEEEEECcHHH-HH---HHHHcCCCceEEEeeccceeecCCCCCccchhhhccCCCccCHH-H-HHH
Confidence 344556677 9999999887663 22 11333323344333432110000 000 11111112 1 133
Q ss_pred HHHHHhccEEEEcChhhhccCCCc-cccc-cccCC-CCcCcchhhhHHhhcCCCCCccEEE-EEeec--cccCCHHHHHH
Q 008544 220 WLARVHCHKVIRLSAATQEYPNSI-VCNV-HGVNP-KFLEIGEKKMEQQQNGNKAFTKGAY-YIGRM--VWSKGYEELLG 293 (562)
Q Consensus 220 ~~~~~~ad~vi~~S~~~~~~~~~~-~~~v-~GVd~-~~~~~~~~~~~~~~~~~~~~~~~il-~vGr~--~~~Kg~~~ll~ 293 (562)
...+ .|+.+++..+...+...+. .... .|-.. +.+....+ .+++++.+.++ +-|.- ...+++..+++
T Consensus 156 l~~~-~a~~v~~~~~~t~~~l~~~g~k~~~vGnPv~d~l~~~~~------~~l~~~~~~lllLpGSR~ae~~~~lp~~l~ 228 (396)
T TIGR03492 156 MRSR-RCLAVFVRDRLTARDLRRQGVRASYLGNPMMDGLEPPER------KPLLTGRFRIALLPGSRPPEAYRNLKLLLR 228 (396)
T ss_pred hhch-hhCEEeCCCHHHHHHHHHCCCeEEEeCcCHHhcCccccc------cccCCCCCEEEEECCCCHHHHHccHHHHHH
Confidence 3334 4899998887777754421 2111 12111 11111111 03333344444 44432 23467889999
Q ss_pred HHHHHHHhcCCcEEEEEe-CCCCHHHHHHHHHhcCCe----------------eEEeCCCCChHHHHhhcCEEEEccCCC
Q 008544 294 LLNIYHKELAGLEMDLYG-NGEDFDQIQRAAKKLKLV----------------VRVYPGRDHADPIFHDYKVFLNPSTTD 356 (562)
Q Consensus 294 a~~~l~~~~~~~~l~ivG-~g~~~~~l~~~~~~l~l~----------------~~~~~~~~~~~~l~~~adv~v~pS~~E 356 (562)
++..+.++ +++++++.- .+.+.+.+++...+.+.. +.+.....+..++|+.||++|..|
T Consensus 229 al~~L~~~-~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADlvI~rS--- 304 (396)
T TIGR03492 229 ALEALPDS-QPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADLGIAMA--- 304 (396)
T ss_pred HHHHHhhC-CCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCEEEECc---
Confidence 99999766 788887654 445567777766655543 344566677889999999999886
Q ss_pred CCcHHHHHHHHcCCcEEeeCCCC----cccccc-----CCceEeeC-CHHHHHHHHHHHHhCCCC
Q 008544 357 VVCTATAEALAMGKIVVCANHPS----NDFFKQ-----FPNCRTYD-GRNGFVEATLKALAEEPA 411 (562)
Q Consensus 357 ~~~~~~lEAma~G~PVI~t~~~~----~e~v~~-----~~~g~~~~-d~~~la~~i~~ll~~~~~ 411 (562)
|.+..|++++|+|+|....++ ..+.+. +....+.+ +++.+++++.++++|++.
T Consensus 305 --Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~~~ 367 (396)
T TIGR03492 305 --GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADPEL 367 (396)
T ss_pred --CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCHHH
Confidence 567799999999999987443 233333 33333333 789999999999988654
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.2e-07 Score=94.80 Aligned_cols=113 Identities=17% Similarity=0.154 Sum_probs=77.1
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCC-CChHHHHhhcCEEEE
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGR-DHADPIFHDYKVFLN 351 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~-~~~~~l~~~adv~v~ 351 (562)
..+++++|..... .+++++ +..++.+++++|.+.... ...++++.... .+..++|..||++|.
T Consensus 193 ~~iLv~~gg~~~~----~~~~~l----~~~~~~~~~v~g~~~~~~--------~~~ni~~~~~~~~~~~~~m~~ad~vIs 256 (318)
T PF13528_consen 193 PKILVYFGGGGPG----DLIEAL----KALPDYQFIVFGPNAADP--------RPGNIHVRPFSTPDFAELMAAADLVIS 256 (318)
T ss_pred CEEEEEeCCCcHH----HHHHHH----HhCCCCeEEEEcCCcccc--------cCCCEEEeecChHHHHHHHHhCCEEEE
Confidence 5678899987555 555655 346688999998752111 13346665543 788899999999996
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEeeCCCC-------ccccccCCceEeeC----CHHHHHHHHHHH
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCANHPS-------NDFFKQFPNCRTYD----GRNGFVEATLKA 405 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t~~~~-------~e~v~~~~~g~~~~----d~~~la~~i~~l 405 (562)
.. --+++.||+++|+|+|+-...+ .+.+++...|...+ +++.|.+.|+++
T Consensus 257 ~~----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 257 KG----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred CC----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence 64 2446999999999999997643 34444555555543 778888877653
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.9e-06 Score=89.63 Aligned_cols=261 Identities=12% Similarity=0.092 Sum_probs=135.6
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccE
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHK 228 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 228 (562)
+..+.+++.+.+||+|++++.....+- +...+...+ |++ .+|.....+.. .-...+..+.+. +|.
T Consensus 82 ~~~~~~~~~~~~Pd~vlv~GD~~~~la--~alaA~~~~IPv~-HveaG~rs~~~----------~eE~~r~~i~~l-a~l 147 (365)
T TIGR03568 82 IIGFSDAFERLKPDLVVVLGDRFEMLA--AAIAAALLNIPIA-HIHGGEVTEGA----------IDESIRHAITKL-SHL 147 (365)
T ss_pred HHHHHHHHHHhCCCEEEEeCCchHHHH--HHHHHHHhCCcEE-EEECCccCCCC----------chHHHHHHHHHH-Hhh
Confidence 456788899999999999986544222 344555555 444 44433221110 011122233333 677
Q ss_pred EEEcChhhhcc-C-----CCccccc--cccCCCC-cCcchhhhHHhhcCCCCCccEE-EEEeecc--ccCCHHHHHHHHH
Q 008544 229 VIRLSAATQEY-P-----NSIVCNV--HGVNPKF-LEIGEKKMEQQQNGNKAFTKGA-YYIGRMV--WSKGYEELLGLLN 296 (562)
Q Consensus 229 vi~~S~~~~~~-~-----~~~~~~v--~GVd~~~-~~~~~~~~~~~~~~~~~~~~~i-l~vGr~~--~~Kg~~~ll~a~~ 296 (562)
.++.++..++. . .+.+.++ .++|.-. .............+++.+.+++ +.+-+-. .....+.+.+.++
T Consensus 148 ~f~~t~~~~~~L~~eg~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~ 227 (365)
T TIGR03568 148 HFVATEEYRQRVIQMGEDPDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLK 227 (365)
T ss_pred ccCCCHHHHHHHHHcCCCCCcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHH
Confidence 77777666663 1 2222222 2444311 1111122333445554333443 3333321 2233333434444
Q ss_pred HHHHhcCCcEEEEEeCCCCHHHHHHHHHhc---CCeeEEeCC--CCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCc
Q 008544 297 IYHKELAGLEMDLYGNGEDFDQIQRAAKKL---KLVVRVYPG--RDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKI 371 (562)
Q Consensus 297 ~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l---~l~~~~~~~--~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~P 371 (562)
.+.+...++.++.-..++..+.+.+.+.++ ..++++.+. +.+...+++.|+++|--|. ..+.||.++|+|
T Consensus 228 ~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~vitdSS-----ggi~EA~~lg~P 302 (365)
T TIGR03568 228 ALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNSS-----SGIIEAPSFGVP 302 (365)
T ss_pred HHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCEEEEcCh-----hHHHhhhhcCCC
Confidence 443332244332222223333333333322 123666654 5566699999999995542 234899999999
Q ss_pred EEeeCCCC-ccccccCCceEeeC-CHHHHHHHHHHHHhCCCC--CccHHHHhcCCHHHHHHHHHHH
Q 008544 372 VVCANHPS-NDFFKQFPNCRTYD-GRNGFVEATLKALAEEPA--QPTDAQTHQLSWESATERFLQV 433 (562)
Q Consensus 372 VI~t~~~~-~e~v~~~~~g~~~~-d~~~la~~i~~ll~~~~~--~l~~~ar~~~sw~~~~~~~~~~ 433 (562)
||+- +. +|.+..+.+.+.++ |++++.+++.+++ ++.. .+ .....-|......+|+.++
T Consensus 303 vv~l--~~R~e~~~~g~nvl~vg~~~~~I~~a~~~~~-~~~~~~~~-~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 303 TINI--GTRQKGRLRADSVIDVDPDKEEIVKAIEKLL-DPAFKKSL-KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred EEee--cCCchhhhhcCeEEEeCCCHHHHHHHHHHHh-ChHHHHHH-hhCCCCCCCChHHHHHHHh
Confidence 9955 34 77777788888675 9999999999954 3221 11 1111346566677776653
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.5e-07 Score=96.56 Aligned_cols=262 Identities=11% Similarity=0.064 Sum_probs=134.2
Q ss_pred CCcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhc
Q 008544 161 EADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQE 238 (562)
Q Consensus 161 ~pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~ 238 (562)
.-|+|.+|....+ .+ ...+.++.. ++.+..|+.|+...-..-.. ..+.+.+-+. .||.|-..+....+
T Consensus 141 ~~D~VWVhDYhL~-ll--P~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP-----~r~eiL~glL--~aDlIgFqt~~~~~ 210 (474)
T PF00982_consen 141 PGDLVWVHDYHLM-LL--PQMLRERGPDARIGFFLHIPFPSSEIFRCLP-----WREEILRGLL--GADLIGFQTFEYAR 210 (474)
T ss_dssp TT-EEEEESGGGT-TH--HHHHHHTT--SEEEEEE-S----HHHHTTST-----THHHHHHHHT--TSSEEEESSHHHHH
T ss_pred CCCEEEEeCCcHH-HH--HHHHHhhcCCceEeeEEecCCCCHHHHhhCC-----cHHHHHHHhh--cCCEEEEecHHHHH
Confidence 4589999987655 33 334544443 57778888887544321111 1111222222 36888888755555
Q ss_pred -c-------C------CC-------ccccc----cccCCCCcCcchhh------hHHhhcCCCCCccEEEEEeeccccCC
Q 008544 239 -Y-------P------NS-------IVCNV----HGVNPKFLEIGEKK------MEQQQNGNKAFTKGAYYIGRMVWSKG 287 (562)
Q Consensus 239 -~-------~------~~-------~~~~v----~GVd~~~~~~~~~~------~~~~~~~~~~~~~~il~vGr~~~~Kg 287 (562)
+ . .. ..+.+ .|||++.+...... ..........+.++|+-+.|++.-||
T Consensus 211 nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kG 290 (474)
T PF00982_consen 211 NFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKG 290 (474)
T ss_dssp HHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-
T ss_pred HHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcC
Confidence 1 0 10 01111 27777655321110 00111112222488999999999999
Q ss_pred HHHHHHHHHHHHHhcCC----cEEEEEeCCC--C-------HHHHHHHHHhcCC--------eeEEeCCC---CChHHHH
Q 008544 288 YEELLGLLNIYHKELAG----LEMDLYGNGE--D-------FDQIQRAAKKLKL--------VVRVYPGR---DHADPIF 343 (562)
Q Consensus 288 ~~~ll~a~~~l~~~~~~----~~l~ivG~g~--~-------~~~l~~~~~~l~l--------~~~~~~~~---~~~~~l~ 343 (562)
+..=+.|++++.+++|+ +.|+-++... + .+++++++.+.+. .+.++... ++.-.+|
T Consensus 291 i~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly 370 (474)
T PF00982_consen 291 IPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALY 370 (474)
T ss_dssp HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHH
Confidence 99999999999998876 5666666521 1 1344444443321 14554432 2333899
Q ss_pred hhcCEEEEccCCCCCcHHHHHHHHcCCc----EEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC-CccH
Q 008544 344 HDYKVFLNPSTTDVVCTATAEALAMGKI----VVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA-QPTD 415 (562)
Q Consensus 344 ~~adv~v~pS~~E~~~~~~lEAma~G~P----VI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~-~l~~ 415 (562)
+.||+++.+|..||+.++..|+.+|... +|.|...| .+.+.+ .+++++ |.+++|++|.++++.+.. +..+
T Consensus 371 ~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~--~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r 448 (474)
T PF00982_consen 371 RAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSE--AALLVNPWDIEEVADAIHEALTMPPEERKER 448 (474)
T ss_dssp HH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TT--S-EEE-TT-HHHHHHHHHHHHT--HHHHHHH
T ss_pred HhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCC--ccEEECCCChHHHHHHHHHHHcCCHHHHHHH
Confidence 9999999999999999999999999875 67776665 666633 335654 999999999999997765 2222
Q ss_pred HHH-----hcCCHHHHHHHHHHHH
Q 008544 416 AQT-----HQLSWESATERFLQVA 434 (562)
Q Consensus 416 ~ar-----~~~sw~~~~~~~~~~y 434 (562)
..+ ..++-..-++.+++..
T Consensus 449 ~~~~~~~v~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 449 HARLREYVREHDVQWWAESFLRDL 472 (474)
T ss_dssp HHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred HHHHHHHhHhCCHHHHHHHHHHHh
Confidence 111 5666666666666543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.8e-07 Score=94.17 Aligned_cols=164 Identities=13% Similarity=0.094 Sum_probs=117.7
Q ss_pred CccEEEEEeeccccCCHHHHHHHHHHHHHhcCC----cEEEEEeCCC-----C----HHHHHHHHHhcCCe--------e
Q 008544 272 FTKGAYYIGRMVWSKGYEELLGLLNIYHKELAG----LEMDLYGNGE-----D----FDQIQRAAKKLKLV--------V 330 (562)
Q Consensus 272 ~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~----~~l~ivG~g~-----~----~~~l~~~~~~l~l~--------~ 330 (562)
+.++|+-+.|+++-||+..=++|++.+.+++|+ +.|+-+.... + +.++++++.+.|.. +
T Consensus 254 ~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv 333 (474)
T PRK10117 254 NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPL 333 (474)
T ss_pred CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeE
Confidence 367888999999999999999999999998886 5566565421 1 23444444443321 4
Q ss_pred EEeCC-C--CChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCC-----cEEeeCCCC-ccccccCCceEeeC--CHHHHH
Q 008544 331 RVYPG-R--DHADPIFHDYKVFLNPSTTDVVCTATAEALAMGK-----IVVCANHPS-NDFFKQFPNCRTYD--GRNGFV 399 (562)
Q Consensus 331 ~~~~~-~--~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~-----PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la 399 (562)
+++.. . ++...+|+.||+++.+|..||+.++..|+.||-. ..|.|...| .+.+. ..++++ |.++++
T Consensus 334 ~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~---~AllVNP~d~~~~A 410 (474)
T PRK10117 334 YYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVA 410 (474)
T ss_pred EEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccchHHHhC---CCeEECCCCHHHHH
Confidence 44322 2 2333899999999999999999999999999965 377777765 66662 356665 999999
Q ss_pred HHHHHHHhCCCC----CccHHHH--hcCCHHHHHHHHHHHHHhcC
Q 008544 400 EATLKALAEEPA----QPTDAQT--HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 400 ~~i~~ll~~~~~----~l~~~ar--~~~sw~~~~~~~~~~y~~~~ 438 (562)
++|.++++.+.. ++..-.. ..++-..-++.+++..+...
T Consensus 411 ~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 411 AALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 999999998875 2221111 66777777888887766554
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.1e-06 Score=88.60 Aligned_cols=265 Identities=12% Similarity=0.022 Sum_probs=159.2
Q ss_pred hHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEE
Q 008544 152 DITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIR 231 (562)
Q Consensus 152 ~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~ 231 (562)
.+.+.|.....||.+--+..+...- ...++.+-.|+..++-.. +. ..+... + -.+-+|..+.
T Consensus 326 e~a~~I~~d~IdILvDl~g~T~d~r--~~v~A~RpAPiqvswlGy-~a---T~g~p~--------~----DY~I~D~y~v 387 (620)
T COG3914 326 EIANAIRTDGIDILVDLDGHTVDTR--CQVFAHRPAPIQVSWLGY-PA---TTGSPN--------M----DYFISDPYTV 387 (620)
T ss_pred HHHHHHHhcCCeEEEeccCceeccc--hhhhhcCCCceEEeeccc-cc---ccCCCc--------c----eEEeeCceec
Confidence 3566778888998876554333222 233555545776665422 11 101000 0 0001344433
Q ss_pred cChhhhccCCCcccccc-ccCC-CCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEE
Q 008544 232 LSAATQEYPNSIVCNVH-GVNP-KFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDL 309 (562)
Q Consensus 232 ~S~~~~~~~~~~~~~v~-GVd~-~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i 309 (562)
. +..+++..+++..+. ...+ +.+.+......+...|++++..+ |+.--...|-..++++.+.++.+..|+..|++
T Consensus 388 P-p~ae~yysEkl~RLp~cy~p~d~~~~v~p~~sR~~lglp~~avV--f~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L 464 (620)
T COG3914 388 P-PTAEEYYSEKLWRLPQCYQPVDGFEPVTPPPSRAQLGLPEDAVV--FCCFNNYFKITPEVFALWMQILSAVPNSVLLL 464 (620)
T ss_pred C-chHHHHHHHHHHhcccccCCCCCcccCCCCcchhhcCCCCCeEE--EEecCCcccCCHHHHHHHHHHHHhCCCcEEEE
Confidence 3 444444443332222 1111 22333333344667888886654 33333578888999999999999999999999
Q ss_pred EeCCCC---HHHHHHHHHhcCCe---eEEeCCCCChH--HHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC--
Q 008544 310 YGNGED---FDQIQRAAKKLKLV---VRVYPGRDHAD--PIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-- 379 (562)
Q Consensus 310 vG~g~~---~~~l~~~~~~l~l~---~~~~~~~~~~~--~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-- 379 (562)
.|.|++ ...+++.+++.|+. .+|.+...+.. +-|..+|+++-+--+ +-.++.+||+.||+|||+--...
T Consensus 465 ~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~Fa 543 (620)
T COG3914 465 KAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFA 543 (620)
T ss_pred ecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeeeccHHHH
Confidence 999876 37889999999986 44544433333 788899999977555 44789999999999999874321
Q ss_pred ----ccccc-cCCceEeeCCHHHHHHHHHHHHhCCCC--CccHHHH------hcCCHHHHHHHHHHHHHhcC
Q 008544 380 ----NDFFK-QFPNCRTYDGRNGFVEATLKALAEEPA--QPTDAQT------HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 380 ----~e~v~-~~~~g~~~~d~~~la~~i~~ll~~~~~--~l~~~ar------~~~sw~~~~~~~~~~y~~~~ 438 (562)
..++. -|..-+++++.++.++.-..+-.|... +.+.+-+ --|+-+..++++.+.|....
T Consensus 544 sR~~~si~~~agi~e~vA~s~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~ 615 (620)
T COG3914 544 SRNGASIATNAGIPELVADSRADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMW 615 (620)
T ss_pred HhhhHHHHHhcCCchhhcCCHHHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHH
Confidence 22222 233344567788877776666666533 2222211 25777888888888887543
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.9e-05 Score=79.96 Aligned_cols=345 Identities=13% Similarity=0.072 Sum_probs=185.9
Q ss_pred CCeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCC
Q 008544 49 QQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFT 128 (562)
Q Consensus 49 ~~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (562)
++||++|...- |. ++-..-+..++.+.++.+..|+.+.. - | +++ ....+++.--...
T Consensus 3 ~~Kv~~I~GTR-PE----~iKmapli~~~~~~~~~~~~vi~TGQ-----H--~-------d~e----m~~~~le~~~i~~ 59 (383)
T COG0381 3 MLKVLTIFGTR-PE----AIKMAPLVKALEKDPDFELIVIHTGQ-----H--R-------DYE----MLDQVLELFGIRK 59 (383)
T ss_pred ceEEEEEEecC-HH----HHHHhHHHHHHHhCCCCceEEEEecc-----c--c-------cHH----HHHHHHHHhCCCC
Confidence 47899988765 32 33455567889888767777776621 0 0 001 1111211111111
Q ss_pred CCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchH
Q 008544 129 STFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDR 208 (562)
Q Consensus 129 ~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~ 208 (562)
|++.+..-..+....-.....+..+.+++.+.+||+|.+|+.....+- ++.++...+..|+.+-.....+..+
T Consensus 60 pdy~L~i~~~~~tl~~~t~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA--~alaa~~~~IpV~HvEAGlRt~~~~----- 132 (383)
T COG0381 60 PDYDLNIMKPGQTLGEITGNIIEGLSKVLEEEKPDLVLVHGDTNTTLA--GALAAFYLKIPVGHVEAGLRTGDLY----- 132 (383)
T ss_pred CCcchhccccCCCHHHHHHHHHHHHHHHHHhhCCCEEEEeCCcchHHH--HHHHHHHhCCceEEEecccccCCCC-----
Confidence 333333221111111122223556788889999999999998777444 3445555443333332221111111
Q ss_pred HHHHHHHHHHHHHHHHhccEEEEcChhhhcc------CCCccccc-c-ccCC-CCc--CcchhhhHHhh-cCCCCCccEE
Q 008544 209 LQAFLLEFVNSWLARVHCHKVIRLSAATQEY------PNSIVCNV-H-GVNP-KFL--EIGEKKMEQQQ-NGNKAFTKGA 276 (562)
Q Consensus 209 ~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~------~~~~~~~v-~-GVd~-~~~--~~~~~~~~~~~-~~~~~~~~~i 276 (562)
+-.-+++.+....+|.-++.++..++. +++.+.++ + -+|. ... ........... ...+..+.++
T Consensus 133 ----~PEE~NR~l~~~~S~~hfapte~ar~nLl~EG~~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~~~~~~~~~iL 208 (383)
T COG0381 133 ----FPEEINRRLTSHLSDLHFAPTEIARKNLLREGVPEKRIFVTGNTVIDALLNTRDRVLEDSKILAKGLDDKDKKYIL 208 (383)
T ss_pred ----CcHHHHHHHHHHhhhhhcCChHHHHHHHHHcCCCccceEEeCChHHHHHHHHHhhhccchhhHHhhhccccCcEEE
Confidence 111122222232377788888777772 33323222 1 1121 000 00001111111 2222222333
Q ss_pred EEEeecc-ccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHH-HhcCCe--eEEeCC--CCChHHHHhhcCEEE
Q 008544 277 YYIGRMV-WSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAA-KKLKLV--VRVYPG--RDHADPIFHDYKVFL 350 (562)
Q Consensus 277 l~vGr~~-~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~-~~l~l~--~~~~~~--~~~~~~l~~~adv~v 350 (562)
+..=|-. ..+++..+++++.++..+++++.++.--. +. ..+++.. ..++.. +..+.+ +.+...++..|-+.+
T Consensus 209 vT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H-~~-~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~il 286 (383)
T COG0381 209 VTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVH-PR-PRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLIL 286 (383)
T ss_pred EEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCC-CC-hhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEE
Confidence 3443433 34899999999999999888877666543 32 4444444 455544 555655 444447777776555
Q ss_pred EccCCCCCcHHHHHHHHcCCcEEeeCCCC--ccccccCCceEeeCCHHHHHHHHHHHHhCCCC--CccHHHHhcCCHHHH
Q 008544 351 NPSTTDVVCTATAEALAMGKIVVCANHPS--NDFFKQFPNCRTYDGRNGFVEATLKALAEEPA--QPTDAQTHQLSWESA 426 (562)
Q Consensus 351 ~pS~~E~~~~~~lEAma~G~PVI~t~~~~--~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~--~l~~~ar~~~sw~~~ 426 (562)
--| |.-.=||-..|+||++-+... +|-++.|.+-++-.|.+.+.+++..++++++. +|+... ..|.=..+
T Consensus 287 tDS-----GgiqEEAp~lg~Pvl~lR~~TERPE~v~agt~~lvg~~~~~i~~~~~~ll~~~~~~~~m~~~~-npYgdg~a 360 (383)
T COG0381 287 TDS-----GGIQEEAPSLGKPVLVLRDTTERPEGVEAGTNILVGTDEENILDAATELLEDEEFYERMSNAK-NPYGDGNA 360 (383)
T ss_pred ecC-----CchhhhHHhcCCcEEeeccCCCCccceecCceEEeCccHHHHHHHHHHHhhChHHHHHHhccc-CCCcCcch
Confidence 444 567889999999999997764 88776655555555899999999999998775 454322 33333445
Q ss_pred HHHHHHHHH
Q 008544 427 TERFLQVAE 435 (562)
Q Consensus 427 ~~~~~~~y~ 435 (562)
.+++.++..
T Consensus 361 s~rIv~~l~ 369 (383)
T COG0381 361 SERIVEILL 369 (383)
T ss_pred HHHHHHHHH
Confidence 555555443
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.1e-05 Score=79.32 Aligned_cols=125 Identities=17% Similarity=0.109 Sum_probs=75.8
Q ss_pred cEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEE-EEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEc
Q 008544 274 KGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEM-DLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNP 352 (562)
Q Consensus 274 ~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l-~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~p 352 (562)
.+++..|.+...+. . +++.+.....+. ++++ +..|.+.+.+.++. ...++.+.+. .+..+++..+|++|..
T Consensus 227 ~v~vs~Gs~~~~~~-~-~~~~~~~al~~~-~~~~i~~~g~~~~~~~~~~----~~~~v~~~~~-~p~~~ll~~~~~~I~h 298 (392)
T TIGR01426 227 VVLISLGTVFNNQP-S-FYRTCVEAFRDL-DWHVVLSVGRGVDPADLGE----LPPNVEVRQW-VPQLEILKKADAFITH 298 (392)
T ss_pred EEEEecCccCCCCH-H-HHHHHHHHHhcC-CCeEEEEECCCCChhHhcc----CCCCeEEeCC-CCHHHHHhhCCEEEEC
Confidence 45566777543322 2 333332222333 3444 45566544433322 2333444433 3456899999999965
Q ss_pred cCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC----CHHHHHHHHHHHHhCCC
Q 008544 353 STTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEP 410 (562)
Q Consensus 353 S~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~ 410 (562)
+ | ..+++|||++|+|+|+....+ .+.+.+...|...+ ++++++++|.++++|+.
T Consensus 299 g---G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~ 361 (392)
T TIGR01426 299 G---G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSDPR 361 (392)
T ss_pred C---C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcCHH
Confidence 4 2 357999999999999986553 33444545565542 67899999999998864
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.41 E-value=4.3e-06 Score=86.14 Aligned_cols=241 Identities=15% Similarity=0.076 Sum_probs=142.9
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCC--EEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhcc
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRF--VVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCH 227 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~--vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 227 (562)
..++.+.+.+.+||++++-+...+++- .+..+.+...+ +++++--. . |.- +.++ .+.+.+. +|
T Consensus 71 ~~~~~~~~~~~~pd~vIlID~pgFNlr-lak~lk~~~~~~~viyYI~Pq-v-WAW--r~~R---------~~~i~~~-~D 135 (373)
T PF02684_consen 71 FRKLVERIKEEKPDVVILIDYPGFNLR-LAKKLKKRGIPIKVIYYISPQ-V-WAW--RPGR---------AKKIKKY-VD 135 (373)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCccHH-HHHHHHHhCCCceEEEEECCc-e-eee--CccH---------HHHHHHH-Hh
Confidence 345777788999999988877666554 22333333223 55555311 1 110 0111 2223333 79
Q ss_pred EEEEcChhhhccCCCcccccc--ccCC-CCcCcch-hhhHHhhcCCCCCccE-EEEEee-ccc-cCCHHHHHHHHHHHHH
Q 008544 228 KVIRLSAATQEYPNSIVCNVH--GVNP-KFLEIGE-KKMEQQQNGNKAFTKG-AYYIGR-MVW-SKGYEELLGLLNIYHK 300 (562)
Q Consensus 228 ~vi~~S~~~~~~~~~~~~~v~--GVd~-~~~~~~~-~~~~~~~~~~~~~~~~-il~vGr-~~~-~Kg~~~ll~a~~~l~~ 300 (562)
.++|.=+...++.++...... |-.. +...+.. ....+... ++++.++ .++.|. -.. .+.+..+++++.++.+
T Consensus 136 ~ll~ifPFE~~~y~~~g~~~~~VGHPl~d~~~~~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~ 214 (373)
T PF02684_consen 136 HLLVIFPFEPEFYKKHGVPVTYVGHPLLDEVKPEPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKK 214 (373)
T ss_pred heeECCcccHHHHhccCCCeEEECCcchhhhccCCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999888887665433332 3221 2222211 12222333 5555554 455563 222 4567899999999999
Q ss_pred hcCCcEEEEEeCCCCH-HHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC
Q 008544 301 ELAGLEMDLYGNGEDF-DQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS 379 (562)
Q Consensus 301 ~~~~~~l~ivG~g~~~-~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~ 379 (562)
+.|++++++....... +.+++.....+....+.....+..++++.||+.+..| |++.+|++.+|+|.|+.-..+
T Consensus 215 ~~p~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~ 289 (373)
T PF02684_consen 215 QRPDLQFVVPVAPEVHEELIEEILAEYPPDVSIVIIEGESYDAMAAADAALAAS-----GTATLEAALLGVPMVVAYKVS 289 (373)
T ss_pred hCCCeEEEEecCCHHHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCc
Confidence 9999999988764443 3355665555554555444556778999999999888 999999999999977764322
Q ss_pred -------ccccccCCceEe--------e------C-CHHHHHHHHHHHHhCCCC
Q 008544 380 -------NDFFKQFPNCRT--------Y------D-GRNGFVEATLKALAEEPA 411 (562)
Q Consensus 380 -------~e~v~~~~~g~~--------~------~-d~~~la~~i~~ll~~~~~ 411 (562)
.-++.-.--++. + + +++.+++++..+++|++.
T Consensus 290 ~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 290 PLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENPEK 343 (373)
T ss_pred HHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCHHH
Confidence 112211111111 1 1 778888888888876643
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.4e-05 Score=81.22 Aligned_cols=261 Identities=12% Similarity=0.056 Sum_probs=154.9
Q ss_pred cEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhcc-
Q 008544 163 DIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEY- 239 (562)
Q Consensus 163 DvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~- 239 (562)
|+|.+|....+ .+ ..++..+.. ++.+..|..++.-.-..-. + ..+.+..-+. .||.|-..++..++-
T Consensus 149 DiIWVhDYhL~-L~--P~mlR~~~~~~~IgfFlHiPfPssEvfr~l-P----~r~eIl~gll--~~dligFqt~~y~~nF 218 (486)
T COG0380 149 DIIWVHDYHLL-LV--PQMLRERIPDAKIGFFLHIPFPSSEVFRCL-P----WREEILEGLL--GADLIGFQTESYARNF 218 (486)
T ss_pred CEEEEEechhh-hh--HHHHHHhCCCceEEEEEeCCCCCHHHHhhC-c----hHHHHHHHhh--cCCeeEecCHHHHHHH
Confidence 99999987655 33 233444433 5677778776642211000 0 1112222222 357777776555551
Q ss_pred -------CC-------------Cccccc----cccCCCCcCcchhhh------HHhhcCCCCCccEEEEEeeccccCCHH
Q 008544 240 -------PN-------------SIVCNV----HGVNPKFLEIGEKKM------EQQQNGNKAFTKGAYYIGRMVWSKGYE 289 (562)
Q Consensus 240 -------~~-------------~~~~~v----~GVd~~~~~~~~~~~------~~~~~~~~~~~~~il~vGr~~~~Kg~~ 289 (562)
.. ...+.+ .|||+..|....... .........+.++|+.+-|++.-||+.
T Consensus 219 ~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~ 298 (486)
T COG0380 219 LDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIP 298 (486)
T ss_pred HHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcH
Confidence 10 111111 278886654222111 111112223378899999999999999
Q ss_pred HHHHHHHHHHHhcCC----cEEEEEeCCCC---H------HHHHHHHHhcCC--------eeEEeCC---CCChHHHHhh
Q 008544 290 ELLGLLNIYHKELAG----LEMDLYGNGED---F------DQIQRAAKKLKL--------VVRVYPG---RDHADPIFHD 345 (562)
Q Consensus 290 ~ll~a~~~l~~~~~~----~~l~ivG~g~~---~------~~l~~~~~~l~l--------~~~~~~~---~~~~~~l~~~ 345 (562)
.=+.|++++..++|+ +.++-++.... . .+++..+.+.+- .+.++.. +++...+|..
T Consensus 299 ~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~ 378 (486)
T COG0380 299 QRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRA 378 (486)
T ss_pred HHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhh
Confidence 999999999988885 55666665322 1 223333333221 1334332 3344488889
Q ss_pred cCEEEEccCCCCCcHHHHHHHHcCC----cEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCCC----cc
Q 008544 346 YKVFLNPSTTDVVCTATAEALAMGK----IVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPAQ----PT 414 (562)
Q Consensus 346 adv~v~pS~~E~~~~~~lEAma~G~----PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~~----l~ 414 (562)
+|+++.+|..||+.++..|+.||-- +.|-|+..| ...+. ..++++ |.++++++|.++|+.+.++ +.
T Consensus 379 aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~---~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~ 455 (486)
T COG0380 379 ADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELR---DALIVNPWDTKEVADAIKRALTMSLEERKERHE 455 (486)
T ss_pred hceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhc---cCEeECCCChHHHHHHHHHHhcCCHHHHHHHHH
Confidence 9999999999999999999999854 677776655 55553 356665 9999999999999977651 11
Q ss_pred HHHH--hcCCHHHHHHHHHHHHHh
Q 008544 415 DAQT--HQLSWESATERFLQVAEL 436 (562)
Q Consensus 415 ~~ar--~~~sw~~~~~~~~~~y~~ 436 (562)
.--. ...+-..-++.+++....
T Consensus 456 ~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 456 KLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHh
Confidence 1111 555666666666655443
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=98.38 E-value=2e-06 Score=77.39 Aligned_cols=139 Identities=18% Similarity=0.176 Sum_probs=70.4
Q ss_pred ccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCCcccccccccchhc
Q 008544 64 TGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAAD 143 (562)
Q Consensus 64 ~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~y~~r~~~~ 143 (562)
||.+.++..+++.|.++| |+|+++++.......... .+++.+.. ... ...+. .
T Consensus 1 GG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~~~~~~~-~~~~~~~~---------------~~~------~~~~~----~ 53 (160)
T PF13579_consen 1 GGIERYVRELARALAARG-HEVTVVTPQPDPEDDEEE-EDGVRVHR---------------LPL------PRRPW----P 53 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT--EEEEEEE---GGG-SEE-ETTEEEEE---------------E--------S-SSS----G
T ss_pred CCHHHHHHHHHHHHHHCC-CEEEEEecCCCCcccccc-cCCceEEe---------------ccC------Cccch----h
Confidence 688899999999999998 999999984322111000 01111110 000 00000 0
Q ss_pred cchhhhHHhHHhhc--CcCCCcEEEecCCchhhhhhchHHHHh-hcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHH
Q 008544 144 KKSILAVGDITEII--PDEEADIAVLEEPEHLTWFHHGKRWKA-KFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNS 219 (562)
Q Consensus 144 ~~~~~~~~~l~~~i--~~~~pDvV~~~~~~~~~~~~~~~~~~~-~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (562)
.........+.+++ .+.+||+||++++. ..+. ..+.+ ..+ |+|.++|+...... ..+...+.+.+.+
T Consensus 54 ~~~~~~~~~~~~~l~~~~~~~Dvv~~~~~~-~~~~---~~~~~~~~~~p~v~~~h~~~~~~~-----~~~~~~~~~~~~~ 124 (160)
T PF13579_consen 54 LRLLRFLRRLRRLLAARRERPDVVHAHSPT-AGLV---AALARRRRGIPLVVTVHGTLFRRG-----SRWKRRLYRWLER 124 (160)
T ss_dssp GGHCCHHHHHHHHCHHCT---SEEEEEHHH-HHHH---HHHHHHHHT--EEEE-SS-T-----------HHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhhhccCCeEEEecccc-hhHH---HHHHHHccCCcEEEEECCCchhhc-----cchhhHHHHHHHH
Confidence 01111234577778 88999999999954 3233 22333 334 99999997532211 2223334445555
Q ss_pred HHHHHhccEEEEcChhhhcc
Q 008544 220 WLARVHCHKVIRLSAATQEY 239 (562)
Q Consensus 220 ~~~~~~ad~vi~~S~~~~~~ 239 (562)
++.+. ||.++++|+..++.
T Consensus 125 ~~~~~-ad~vi~~S~~~~~~ 143 (160)
T PF13579_consen 125 RLLRR-ADRVIVVSEAMRRY 143 (160)
T ss_dssp HHHHH--SEEEESSHHHHHH
T ss_pred HHHhc-CCEEEECCHHHHHH
Confidence 55554 89999999999884
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.31 E-value=7e-06 Score=72.77 Aligned_cols=137 Identities=21% Similarity=0.205 Sum_probs=77.5
Q ss_pred eEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCC
Q 008544 51 HIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTST 130 (562)
Q Consensus 51 rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (562)
||+++++.. +.....++++|.++| |||+++++.... ......+++.+... .
T Consensus 1 KIl~i~~~~-------~~~~~~~~~~L~~~g-~~V~ii~~~~~~--~~~~~~~~i~~~~~---------------~---- 51 (139)
T PF13477_consen 1 KILLIGNTP-------STFIYNLAKELKKRG-YDVHIITPRNDY--EKYEIIEGIKVIRL---------------P---- 51 (139)
T ss_pred CEEEEecCc-------HHHHHHHHHHHHHCC-CEEEEEEcCCCc--hhhhHhCCeEEEEe---------------c----
Confidence 688888865 235788999999998 999999982211 00000111111110 0
Q ss_pred cccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcHHHHhhhhchH
Q 008544 131 FDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYLEYVKREKNDR 208 (562)
Q Consensus 131 ~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~~~~~~~~~~~ 208 (562)
. +.+. ....+ .+..+.+++++.+|||||+|.+...+.+ +..+++..+ |++.+.|+... +... ..
T Consensus 52 --~---~~k~--~~~~~-~~~~l~k~ik~~~~DvIh~h~~~~~~~~--~~l~~~~~~~~~~i~~~hg~~~-~~~~-~~-- 117 (139)
T PF13477_consen 52 --S---PRKS--PLNYI-KYFRLRKIIKKEKPDVIHCHTPSPYGLF--AMLAKKLLKNKKVIYTVHGSDF-YNSS-KK-- 117 (139)
T ss_pred --C---CCCc--cHHHH-HHHHHHHHhccCCCCEEEEecCChHHHH--HHHHHHHcCCCCEEEEecCCee-ecCC-ch--
Confidence 0 0000 11111 2346889999999999999998775454 333333333 89999996422 1111 11
Q ss_pred HHHHHHHHHHHHHHHHhccEEEEcC
Q 008544 209 LQAFLLEFVNSWLARVHCHKVIRLS 233 (562)
Q Consensus 209 ~~~~~~~~~~~~~~~~~ad~vi~~S 233 (562)
..+.+.+.+++.+. +|.+++.|
T Consensus 118 --~~~~~~~~~~~~k~-~~~ii~~~ 139 (139)
T PF13477_consen 118 --KKLKKFIIKFAFKR-ADKIIVQS 139 (139)
T ss_pred --HHHHHHHHHHHHHh-CCEEEEcC
Confidence 11344455555554 89999876
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.31 E-value=7.8e-06 Score=85.90 Aligned_cols=169 Identities=12% Similarity=-0.011 Sum_probs=107.0
Q ss_pred HhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCC-HHHHHHHHHhcCCe---eEEeCCCCCh
Q 008544 264 QQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGED-FDQIQRAAKKLKLV---VRVYPGRDHA 339 (562)
Q Consensus 264 ~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~-~~~l~~~~~~l~l~---~~~~~~~~~~ 339 (562)
+...+++++..+ |..--...|=-+..++++.++.+..|+.+|++...+.. .+.+++.+.+.|+. +.| .+....
T Consensus 276 R~~~gLp~d~vv--F~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f-~~~~~~ 352 (468)
T PF13844_consen 276 RAQYGLPEDAVV--FGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIF-SPVAPR 352 (468)
T ss_dssp TGGGT--SSSEE--EEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEE-EE---H
T ss_pred HHHcCCCCCceE--EEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEE-cCCCCH
Confidence 445788876644 43333467888999999999999999999999876544 57788888888886 333 333333
Q ss_pred H---HHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC------ccccc-cCCceEeeCCHHHHHHHHHHHHhCC
Q 008544 340 D---PIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS------NDFFK-QFPNCRTYDGRNGFVEATLKALAEE 409 (562)
Q Consensus 340 ~---~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~------~e~v~-~~~~g~~~~d~~~la~~i~~ll~~~ 409 (562)
+ ..++.+|+++-|-.+ +-+++.+||+++|+|||+-.... ..++. -|-.-++..|.+++.+.-.++.+|+
T Consensus 353 ~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~s~~eYv~~Av~La~D~ 431 (468)
T PF13844_consen 353 EEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIADSEEEYVEIAVRLATDP 431 (468)
T ss_dssp HHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-SSHHHHHHHHHHHHH-H
T ss_pred HHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCCCHHHHHHHHHHHhCCH
Confidence 3 566789999988544 44899999999999999986532 12221 2334456789999999999999988
Q ss_pred CC--CccHHHH------hcCCHHHHHHHHHHHHHh
Q 008544 410 PA--QPTDAQT------HQLSWESATERFLQVAEL 436 (562)
Q Consensus 410 ~~--~l~~~ar------~~~sw~~~~~~~~~~y~~ 436 (562)
+. .++++-+ .-|+-...++.++++|+.
T Consensus 432 ~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 432 ERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp HHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 86 4444433 457888888888888875
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.00013 Score=74.65 Aligned_cols=117 Identities=16% Similarity=0.167 Sum_probs=70.3
Q ss_pred cEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCC-CChHHHHhhcCEEEEc
Q 008544 274 KGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGR-DHADPIFHDYKVFLNP 352 (562)
Q Consensus 274 ~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~-~~~~~l~~~adv~v~p 352 (562)
.+++|.|. .+...+++++ .+.+++.+++.+. +... ..+..++.+.+.. ++..++|..||++|.-
T Consensus 190 ~iLv~~g~----~~~~~l~~~l----~~~~~~~~i~~~~-~~~~------~~~~~~v~~~~~~~~~~~~~l~~ad~vI~~ 254 (321)
T TIGR00661 190 YILVYIGF----EYRYKILELL----GKIANVKFVCYSY-EVAK------NSYNENVEIRRITTDNFKELIKNAELVITH 254 (321)
T ss_pred cEEEECCc----CCHHHHHHHH----HhCCCeEEEEeCC-CCCc------cccCCCEEEEECChHHHHHHHHhCCEEEEC
Confidence 34555443 3556666665 3345665544332 2111 1122345555443 4678999999999976
Q ss_pred cCCCCCcHHHHHHHHcCCcEEeeCCCC-cc------ccccCCceEeeC--CHHHHHHHHHHHHhCCC
Q 008544 353 STTDVVCTATAEALAMGKIVVCANHPS-ND------FFKQFPNCRTYD--GRNGFVEATLKALAEEP 410 (562)
Q Consensus 353 S~~E~~~~~~lEAma~G~PVI~t~~~~-~e------~v~~~~~g~~~~--d~~~la~~i~~ll~~~~ 410 (562)
+ | ..++.||+++|+|+|....++ .| .+.+...|...+ +. ++.+++.+.++++.
T Consensus 255 ~---G-~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~~~~~~~~ 316 (321)
T TIGR00661 255 G---G-FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAILDIRNMKR 316 (321)
T ss_pred C---C-hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHHhcccccc
Confidence 5 2 346999999999999987754 23 345555565553 44 66666666666654
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.5e-05 Score=89.05 Aligned_cols=163 Identities=12% Similarity=0.021 Sum_probs=112.2
Q ss_pred CccEEEEEeeccccCCHHHHHHHHHHHHHhcCCc----EEEEEeC-----CCCH----HHHHHHHHhcCC--------ee
Q 008544 272 FTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGL----EMDLYGN-----GEDF----DQIQRAAKKLKL--------VV 330 (562)
Q Consensus 272 ~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~----~l~ivG~-----g~~~----~~l~~~~~~l~l--------~~ 330 (562)
+.++|+-+.|++.-||+..=+.|++++.+++|++ .|+-+.. +++. .++.+.+.+.+. .+
T Consensus 338 ~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv 417 (854)
T PLN02205 338 DRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPI 417 (854)
T ss_pred CCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceE
Confidence 4678999999999999999999999999999874 5555544 2222 333444443321 14
Q ss_pred EEeCC---CCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCC-------------------cEEeeCCCC-ccccccCC
Q 008544 331 RVYPG---RDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGK-------------------IVVCANHPS-NDFFKQFP 387 (562)
Q Consensus 331 ~~~~~---~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~-------------------PVI~t~~~~-~e~v~~~~ 387 (562)
.++.. +.+.-.+|+.||+++.++..||+.++..|+.+|.. .+|.|...| ...+ .
T Consensus 418 ~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L---~ 494 (854)
T PLN02205 418 VLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL---S 494 (854)
T ss_pred EEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHh---C
Confidence 44333 22333889999999999999999999999999864 256665544 4444 2
Q ss_pred ceEeeC--CHHHHHHHHHHHHhCCCC----CccHHHH--hcCCHHHHHHHHHHHHHhc
Q 008544 388 NCRTYD--GRNGFVEATLKALAEEPA----QPTDAQT--HQLSWESATERFLQVAELV 437 (562)
Q Consensus 388 ~g~~~~--d~~~la~~i~~ll~~~~~----~l~~~ar--~~~sw~~~~~~~~~~y~~~ 437 (562)
..+.++ |.++++++|.++++.+.. ++.+..+ ..++-..-++.+++..+.+
T Consensus 495 ~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~ 552 (854)
T PLN02205 495 GAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERT 552 (854)
T ss_pred cCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 355564 999999999999998875 2222222 5566666666666655443
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=0.00026 Score=76.76 Aligned_cols=126 Identities=16% Similarity=0.063 Sum_probs=76.6
Q ss_pred ccEEEEEeecccc-CCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHh--hcCEE
Q 008544 273 TKGAYYIGRMVWS-KGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFH--DYKVF 349 (562)
Q Consensus 273 ~~~il~vGr~~~~-Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~--~adv~ 349 (562)
..+++..|..... +....+++.+.+..++.| .++++...++..+ ..+.-++. ..+.-+..++++ .+++|
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-~~viw~~~~~~~~------~~~p~Nv~-i~~w~Pq~~lL~hp~v~~f 368 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-YNVLWKYDGEVEA------INLPANVL-TQKWFPQRAVLKHKNVKAF 368 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-CeEEEEECCCcCc------ccCCCceE-EecCCCHHHHhcCCCCCEE
Confidence 3555667776432 222333433333334444 4666665543221 12222333 344456678884 58888
Q ss_pred EEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC----CHHHHHHHHHHHHhCCC
Q 008544 350 LNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEP 410 (562)
Q Consensus 350 v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~ 410 (562)
|.- |-..++.||+.+|+|+|+-...+ ...+.+.+.|...+ +.+++.++|.++++|+.
T Consensus 369 ItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~~ 434 (507)
T PHA03392 369 VTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQLVLAIVDVIENPK 434 (507)
T ss_pred Eec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHHHHHHHHHhCCHH
Confidence 843 45678999999999999987653 44444555565542 78999999999998754
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.27 E-value=0.00017 Score=73.36 Aligned_cols=217 Identities=13% Similarity=0.040 Sum_probs=122.4
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccE
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHK 228 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 228 (562)
...+.+++++++||++++.+.... .+.+..++ |.|....+...... ++...- .||.
T Consensus 72 ~~~l~~~~~~~~pDv~is~~s~~a------~~va~~lgiP~I~f~D~e~a~~~----------------~~Lt~P-la~~ 128 (335)
T PF04007_consen 72 QYKLLKLIKKFKPDVAISFGSPEA------ARVAFGLGIPSIVFNDTEHAIAQ----------------NRLTLP-LADV 128 (335)
T ss_pred HHHHHHHHHhhCCCEEEecCcHHH------HHHHHHhCCCeEEEecCchhhcc----------------ceeehh-cCCe
Confidence 445777888899999998766444 22444445 77766654322111 111111 3799
Q ss_pred EEEcChhh----hccCCC-ccccccccCC----CCcCcchhhhHHhhcCCCCCccEEEEEeeccccC-----CH-HHHHH
Q 008544 229 VIRLSAAT----QEYPNS-IVCNVHGVNP----KFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSK-----GY-EELLG 293 (562)
Q Consensus 229 vi~~S~~~----~~~~~~-~~~~v~GVd~----~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~K-----g~-~~ll~ 293 (562)
+++++-.- +++-.+ .+...+|++. ..|.|+.. .....|..+ .++|+. |..+.+ |- ..+-+
T Consensus 129 i~~P~~~~~~~~~~~G~~~~i~~y~G~~E~ayl~~F~Pd~~--vl~~lg~~~-~~yIvv--R~~~~~A~y~~~~~~i~~~ 203 (335)
T PF04007_consen 129 IITPEAIPKEFLKRFGAKNQIRTYNGYKELAYLHPFKPDPE--VLKELGLDD-EPYIVV--RPEAWKASYDNGKKSILPE 203 (335)
T ss_pred eECCcccCHHHHHhcCCcCCEEEECCeeeEEeecCCCCChh--HHHHcCCCC-CCEEEE--EeccccCeeecCccchHHH
Confidence 98887433 233222 2333556654 33554433 344566554 444442 333322 21 23445
Q ss_pred HHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEE
Q 008544 294 LLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVV 373 (562)
Q Consensus 294 a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI 373 (562)
.++.+.+.. +. ++++...++..++ .++.+ +.+.....+..+++..||++|--+ |+...||...|+|.|
T Consensus 204 ii~~L~~~~-~~-vV~ipr~~~~~~~---~~~~~--~~i~~~~vd~~~Ll~~a~l~Ig~g-----gTMa~EAA~LGtPaI 271 (335)
T PF04007_consen 204 IIEELEKYG-RN-VVIIPRYEDQREL---FEKYG--VIIPPEPVDGLDLLYYADLVIGGG-----GTMAREAALLGTPAI 271 (335)
T ss_pred HHHHHHhhC-ce-EEEecCCcchhhH---HhccC--ccccCCCCCHHHHHHhcCEEEeCC-----cHHHHHHHHhCCCEE
Confidence 555555543 33 5666554333222 23333 344445556668999999999543 788999999999999
Q ss_pred eeCCC---C-ccccccCCceEe--eCCHHHHHHHHHHHHhC
Q 008544 374 CANHP---S-NDFFKQFPNCRT--YDGRNGFVEATLKALAE 408 (562)
Q Consensus 374 ~t~~~---~-~e~v~~~~~g~~--~~d~~~la~~i~~ll~~ 408 (562)
.+..+ + .+++.+. |++ ..|++++.+.+.+.+..
T Consensus 272 s~~~g~~~~vd~~L~~~--Gll~~~~~~~ei~~~v~~~~~~ 310 (335)
T PF04007_consen 272 SCFPGKLLAVDKYLIEK--GLLYHSTDPDEIVEYVRKNLGK 310 (335)
T ss_pred EecCCcchhHHHHHHHC--CCeEecCCHHHHHHHHHHhhhc
Confidence 98543 2 3444433 455 46999999877765543
|
They are found in archaea and some bacteria and have no known function. |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.00012 Score=70.57 Aligned_cols=246 Identities=15% Similarity=0.086 Sum_probs=130.5
Q ss_pred CeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCC
Q 008544 50 QHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTS 129 (562)
Q Consensus 50 ~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (562)
|||+|+|+.++....|--.+++.+|+.|.++| ..++.++... -+. ++ .+ .| . .
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~-~~~~fl~k~~----~e~-~~------~~--------~~--~--~--- 53 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKRG-FACLFLTKQD----IEA-II------HK--------VY--E--G--- 53 (318)
T ss_pred CcEEEEecCCcccCcchhhhHHHHHHHHHhcC-ceEEEecccc----hhh-hh------hh--------hh--h--h---
Confidence 68999999997777787888999999999998 8888886611 000 00 00 11 0 0
Q ss_pred CcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchHH
Q 008544 130 TFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRL 209 (562)
Q Consensus 130 ~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~ 209 (562)
+....+. ....|+++++|+++..+.....-. ...++......+..+.+.......
T Consensus 54 -f~~~~~~---------------~~n~ik~~k~d~lI~Dsygl~~dd--~k~ik~e~~~k~l~fDd~~~~~~~------- 108 (318)
T COG3980 54 -FKVLEGR---------------GNNLIKEEKFDLLIFDSYGLNADD--FKLIKEEAGSKILIFDDENAKSFK------- 108 (318)
T ss_pred -ccceeee---------------cccccccccCCEEEEeccCCCHHH--HHHHHHHhCCcEEEecCCCccchh-------
Confidence 1111111 223678899999988765443222 233443334344344322111110
Q ss_pred HHHHHHHHHHHHHHHhccEEEEcChhhhccCCCccccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHH
Q 008544 210 QAFLLEFVNSWLARVHCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYE 289 (562)
Q Consensus 210 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~ 289 (562)
.....++...... |+-..+ +. .....-|.+.-.+.+.-. ..+......+-..+++..|.-+ .||
T Consensus 109 --d~d~ivN~~~~a~--~~y~~v-------~~-k~~~~lGp~y~~lr~eF~-~~r~~~~~r~~r~ilI~lGGsD-pk~-- 172 (318)
T COG3980 109 --DNDLIVNAILNAN--DYYGLV-------PN-KTRYYLGPGYAPLRPEFY-ALREENTERPKRDILITLGGSD-PKN-- 172 (318)
T ss_pred --hhHhhhhhhhcch--hhcccc-------Cc-ceEEEecCCceeccHHHH-HhHHHHhhcchheEEEEccCCC-hhh--
Confidence 0111111111111 111111 11 111112433322221110 0111111112233566667543 334
Q ss_pred HHHHHHHHHHHhcCCcEEEE-EeCC-CCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHH
Q 008544 290 ELLGLLNIYHKELAGLEMDL-YGNG-EDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALA 367 (562)
Q Consensus 290 ~ll~a~~~l~~~~~~~~l~i-vG~g-~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma 367 (562)
..++.++.+.+.. +.+.+ +|++ +....+++.++... +++++-..+++.++|.+||+.+... |.++.||+.
T Consensus 173 lt~kvl~~L~~~~--~nl~iV~gs~~p~l~~l~k~~~~~~-~i~~~~~~~dma~LMke~d~aI~Aa-----GstlyEa~~ 244 (318)
T COG3980 173 LTLKVLAELEQKN--VNLHIVVGSSNPTLKNLRKRAEKYP-NINLYIDTNDMAELMKEADLAISAA-----GSTLYEALL 244 (318)
T ss_pred hHHHHHHHhhccC--eeEEEEecCCCcchhHHHHHHhhCC-CeeeEecchhHHHHHHhcchheecc-----chHHHHHHH
Confidence 3455666665553 44444 3544 34677888877665 5778888899999999999988653 889999999
Q ss_pred cCCc
Q 008544 368 MGKI 371 (562)
Q Consensus 368 ~G~P 371 (562)
.|+|
T Consensus 245 lgvP 248 (318)
T COG3980 245 LGVP 248 (318)
T ss_pred hcCC
Confidence 9999
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.8e-05 Score=81.57 Aligned_cols=242 Identities=13% Similarity=0.093 Sum_probs=134.0
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEE
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKV 229 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 229 (562)
+..+.+.+.+.+||+|++++.....+. ++..+...+--|..++.-...+...++. .-...+..+.+. +|..
T Consensus 56 ~~~~~~~~~~~~Pd~Vlv~GD~~~~la--~alaA~~~~ipv~HieaGlRs~d~~~g~------~de~~R~~i~~l-a~lh 126 (346)
T PF02350_consen 56 IIELADVLEREKPDAVLVLGDRNEALA--AALAAFYLNIPVAHIEAGLRSGDRTEGM------PDEINRHAIDKL-AHLH 126 (346)
T ss_dssp HHHHHHHHHHHT-SEEEEETTSHHHHH--HHHHHHHTT-EEEEES-----S-TTSST------THHHHHHHHHHH--SEE
T ss_pred HHHHHHHHHhcCCCEEEEEcCCchHHH--HHHHHHHhCCCEEEecCCCCccccCCCC------chhhhhhhhhhh-hhhh
Confidence 456778888999999999988766444 3445555553355666443322222111 222334444555 8999
Q ss_pred EEcChhhhcc------CCCccccc-c-ccCCCCcCc-chhhhH-HhhcCCCCCccEEEEEe-eccc---cCCHHHHHHHH
Q 008544 230 IRLSAATQEY------PNSIVCNV-H-GVNPKFLEI-GEKKME-QQQNGNKAFTKGAYYIG-RMVW---SKGYEELLGLL 295 (562)
Q Consensus 230 i~~S~~~~~~------~~~~~~~v-~-GVd~~~~~~-~~~~~~-~~~~~~~~~~~~il~vG-r~~~---~Kg~~~ll~a~ 295 (562)
++.++..++. +.+++..+ + ++|.-.... ...... ..........++++... +... ......+.+++
T Consensus 127 f~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l 206 (346)
T PF02350_consen 127 FAPTEEARERLLQEGEPPERIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEAL 206 (346)
T ss_dssp EESSHHHHHHHHHTT--GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHH
T ss_pred ccCCHHHHHHHHhcCCCCCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHH
Confidence 9999887773 22333222 1 333311100 000000 00100012244444433 3222 34567888888
Q ss_pred HHHHHhcCCcEEEEEeCCCC--HHHHHHHHHhcCCeeEEeCC--CCChHHHHhhcCEEEEccCCCCCcHHHH-HHHHcCC
Q 008544 296 NIYHKELAGLEMDLYGNGED--FDQIQRAAKKLKLVVRVYPG--RDHADPIFHDYKVFLNPSTTDVVCTATA-EALAMGK 370 (562)
Q Consensus 296 ~~l~~~~~~~~l~ivG~g~~--~~~l~~~~~~l~l~~~~~~~--~~~~~~l~~~adv~v~pS~~E~~~~~~l-EAma~G~ 370 (562)
..+.+. +++.+++.....+ ...+.+..+++. +++++.. +.+.-.+++.|+++|--| | .+. ||.++|+
T Consensus 207 ~~L~~~-~~~~vi~~~hn~p~~~~~i~~~l~~~~-~v~~~~~l~~~~~l~ll~~a~~vvgdS-----s-GI~eEa~~lg~ 278 (346)
T PF02350_consen 207 KALAER-QNVPVIFPLHNNPRGSDIIIEKLKKYD-NVRLIEPLGYEEYLSLLKNADLVVGDS-----S-GIQEEAPSLGK 278 (346)
T ss_dssp HHHHHH-TTEEEEEE--S-HHHHHHHHHHHTT-T-TEEEE----HHHHHHHHHHESEEEESS-----H-HHHHHGGGGT-
T ss_pred HHHHhc-CCCcEEEEecCCchHHHHHHHHhcccC-CEEEECCCCHHHHHHHHhcceEEEEcC-----c-cHHHHHHHhCC
Confidence 888877 7898888886333 456666666653 6776554 445558999999998665 5 566 9999999
Q ss_pred cEEeeCCCC--ccccccCCceEeeCCHHHHHHHHHHHHhC
Q 008544 371 IVVCANHPS--NDFFKQFPNCRTYDGRNGFVEATLKALAE 408 (562)
Q Consensus 371 PVI~t~~~~--~e~v~~~~~g~~~~d~~~la~~i~~ll~~ 408 (562)
|||.-+..+ .+....+.+.++-.|.+++.++|.+++++
T Consensus 279 P~v~iR~~geRqe~r~~~~nvlv~~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 279 PVVNIRDSGERQEGRERGSNVLVGTDPEAIIQAIEKALSD 318 (346)
T ss_dssp -EEECSSS-S-HHHHHTTSEEEETSSHHHHHHHHHHHHH-
T ss_pred eEEEecCCCCCHHHHhhcceEEeCCCHHHHHHHHHHHHhC
Confidence 999995544 77777777777335999999999999986
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.08 E-value=7.7e-05 Score=68.94 Aligned_cols=163 Identities=19% Similarity=0.139 Sum_probs=92.5
Q ss_pred CeEEEEecccCCC-cccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCC
Q 008544 50 QHIAIFTTASLPW-LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFT 128 (562)
Q Consensus 50 ~rI~ivt~~~~P~-~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (562)
+||+|+.+-..|. .||.++...+|+..|.++| ++|+|.+...........| ++++ ....
T Consensus 2 kkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g-~~v~Vyc~~~~~~~~~~~y-~gv~------------------l~~i 61 (185)
T PF09314_consen 2 KKIAIIGTRGIPARYGGFETFVEELAPRLVSKG-IDVTVYCRSDYYPYKEFEY-NGVR------------------LVYI 61 (185)
T ss_pred ceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCC-ceEEEEEccCCCCCCCccc-CCeE------------------EEEe
Confidence 6899999987765 7999999999999999998 9999998732111111001 1111 1000
Q ss_pred CCcccccccccchhccchhhhHHhHHhhcCc--CCCcEEEecCCchhhhhhchHHHHhhcC----CEEEEEcCCcHHHHh
Q 008544 129 STFDTRFYPGKFAADKKSILAVGDITEIIPD--EEADIAVLEEPEHLTWFHHGKRWKAKFR----FVVGIVHTNYLEYVK 202 (562)
Q Consensus 129 ~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~--~~pDvV~~~~~~~~~~~~~~~~~~~~~~----~vi~~~h~~~~~~~~ 202 (562)
+..... ........+..+......++. .+.||++++......++. .+.+++. +++..+|. .++.+
T Consensus 62 ~~~~~g----~~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~---~~~r~~~~~g~~v~vN~DG--lEWkR 132 (185)
T PF09314_consen 62 PAPKNG----SAESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFL---PFLRKLRKKGGKVVVNMDG--LEWKR 132 (185)
T ss_pred CCCCCC----chHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHH---HHHHhhhhcCCcEEECCCc--chhhh
Confidence 000000 000001111112222222332 367899988765322221 1333332 55655553 33443
Q ss_pred hhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhccCCCc
Q 008544 203 REKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYPNSI 243 (562)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 243 (562)
.+++.+.+.+++.-.+...+. +|.+|+.|+..+++..+.
T Consensus 133 -~KW~~~~k~~lk~~E~~avk~-ad~lIaDs~~I~~y~~~~ 171 (185)
T PF09314_consen 133 -AKWGRPAKKYLKFSEKLAVKY-ADRLIADSKGIQDYIKER 171 (185)
T ss_pred -hhcCHHHHHHHHHHHHHHHHh-CCEEEEcCHHHHHHHHHH
Confidence 467777777777777777776 999999999999965533
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.7e-05 Score=80.07 Aligned_cols=207 Identities=14% Similarity=0.052 Sum_probs=122.2
Q ss_pred HhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEE
Q 008544 151 GDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVI 230 (562)
Q Consensus 151 ~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 230 (562)
+++.+.+...+||++++-+...++.- -....++..|.+-++|-..+.. +. |...-...+.+ ++|+++
T Consensus 75 ~~~~~~i~~~kpD~~i~IDsPdFnl~--vak~lrk~~p~i~iihYV~PsV------WA----Wr~~Ra~~i~~-~~D~lL 141 (381)
T COG0763 75 RELVRYILANKPDVLILIDSPDFNLR--VAKKLRKAGPKIKIIHYVSPSV------WA----WRPKRAVKIAK-YVDHLL 141 (381)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCchH--HHHHHHHhCCCCCeEEEECcce------ee----echhhHHHHHH-HhhHee
Confidence 44666777899999888766555443 1223333344444444211110 00 00000112233 379999
Q ss_pred EcChhhhccCCCccccc--ccc---CCCCcCcchhhhHHhhcCCCCCccE-EEEEee-cc-ccCCHHHHHHHHHHHHHhc
Q 008544 231 RLSAATQEYPNSIVCNV--HGV---NPKFLEIGEKKMEQQQNGNKAFTKG-AYYIGR-MV-WSKGYEELLGLLNIYHKEL 302 (562)
Q Consensus 231 ~~S~~~~~~~~~~~~~v--~GV---d~~~~~~~~~~~~~~~~~~~~~~~~-il~vGr-~~-~~Kg~~~ll~a~~~l~~~~ 302 (562)
+.=+...++..+..... .|- |...+.+ .+...+...+++.+.++ .+..|. -. -.+....+.+++.+++.++
T Consensus 142 ailPFE~~~y~k~g~~~~yVGHpl~d~i~~~~-~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~ 220 (381)
T COG0763 142 AILPFEPAFYDKFGLPCTYVGHPLADEIPLLP-DREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARY 220 (381)
T ss_pred eecCCCHHHHHhcCCCeEEeCChhhhhccccc-cHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhC
Confidence 99988888655432221 122 2222232 23335666777665555 456663 22 2456778899999999999
Q ss_pred CCcEEEEEeCCCCHHHHHHHH-HhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeC
Q 008544 303 AGLEMDLYGNGEDFDQIQRAA-KKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCAN 376 (562)
Q Consensus 303 ~~~~l~ivG~g~~~~~l~~~~-~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~ 376 (562)
|+.++++--.....+.++... +........+.......+.+..||+.+..| |++.+|+|.+|+|.|++-
T Consensus 221 ~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~Y 290 (381)
T COG0763 221 PDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILIDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVAY 290 (381)
T ss_pred CCceEEEecCcHHHHHHHHHHhhccccCceEEecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEEE
Confidence 999999988755534443333 222212233333345568999999988887 999999999999988873
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00013 Score=78.60 Aligned_cols=202 Identities=9% Similarity=-0.009 Sum_probs=118.3
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC---CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhc
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR---FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHC 226 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~---~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 226 (562)
..++.+.+++++||++++-+....++- .++ ..++.+ |+++++--.. +.- +.++ .+.+.+. +
T Consensus 299 ~~~l~~~i~~~kPD~vIlID~PgFNlr-LAK-~lkk~Gi~ipviyYVsPqV--WAW--R~~R---------ikki~k~-v 362 (608)
T PRK01021 299 YRKLYKTILKTNPRTVICIDFPDFHFL-LIK-KLRKRGYKGKIVHYVCPSI--WAW--RPKR---------KTILEKY-L 362 (608)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCHH-HHH-HHHhcCCCCCEEEEECccc--eee--Ccch---------HHHHHHH-h
Confidence 345677788899999988776666554 233 334444 6666654221 110 0111 1223333 6
Q ss_pred cEEEEcChhhhccCCCcccccc--ccCC-CCcC-cchhhhHHhhcCCCCCccE-EEEEee-ccc-cCCHHHHHHHHH--H
Q 008544 227 HKVIRLSAATQEYPNSIVCNVH--GVNP-KFLE-IGEKKMEQQQNGNKAFTKG-AYYIGR-MVW-SKGYEELLGLLN--I 297 (562)
Q Consensus 227 d~vi~~S~~~~~~~~~~~~~v~--GVd~-~~~~-~~~~~~~~~~~~~~~~~~~-il~vGr-~~~-~Kg~~~ll~a~~--~ 297 (562)
|+++|.=+...++.++...++. |-.. +.+. .......++..+++++.++ .+..|. -.+ .+....+++++. .
T Consensus 363 D~ll~IfPFE~~~y~~~gv~v~yVGHPL~d~i~~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~ 442 (608)
T PRK01021 363 DLLLLILPFEQNLFKDSPLRTVYLGHPLVETISSFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASS 442 (608)
T ss_pred hhheecCccCHHHHHhcCCCeEEECCcHHhhcccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999888886654333321 2211 1121 1122233555666555454 456663 222 456778888886 4
Q ss_pred HHHhcCCcEEEEEeCCCC-HHHHHHHHHhcC-CeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEee
Q 008544 298 YHKELAGLEMDLYGNGED-FDQIQRAAKKLK-LVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCA 375 (562)
Q Consensus 298 l~~~~~~~~l~ivG~g~~-~~~l~~~~~~l~-l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t 375 (562)
+. ++.++++....+. .+.+++..+..+ +.+.+..+. +..++++.||+.+..| |++.+|++.+|+|.|+.
T Consensus 443 l~---~~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~ii~~~-~~~~~m~aaD~aLaaS-----GTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 443 LA---STHQLLVSSANPKYDHLILEVLQQEGCLHSHIVPSQ-FRYELMRECDCALAKC-----GTIVLETALNQTPTIVT 513 (608)
T ss_pred hc---cCeEEEEecCchhhHHHHHHHHhhcCCCCeEEecCc-chHHHHHhcCeeeecC-----CHHHHHHHHhCCCEEEE
Confidence 33 2577777544322 466677665444 244554332 2368999999999988 99999999999998876
Q ss_pred C
Q 008544 376 N 376 (562)
Q Consensus 376 ~ 376 (562)
-
T Consensus 514 Y 514 (608)
T PRK01021 514 C 514 (608)
T ss_pred E
Confidence 3
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00029 Score=74.20 Aligned_cols=120 Identities=14% Similarity=0.080 Sum_probs=81.4
Q ss_pred EEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEE-eCCCCChHHHHhhcCEEEEccCC
Q 008544 277 YYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRV-YPGRDHADPIFHDYKVFLNPSTT 355 (562)
Q Consensus 277 l~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~-~~~~~~~~~l~~~adv~v~pS~~ 355 (562)
+..|..... ..+++.+.....+. +.++++...+ .+..+. ++..++ .-++.+..+++..||++|..
T Consensus 242 vslGt~~~~---~~l~~~~~~a~~~l-~~~vi~~~~~-~~~~~~------~~p~n~~v~~~~p~~~~l~~ad~vI~h--- 307 (406)
T COG1819 242 VSLGTVGNA---VELLAIVLEALADL-DVRVIVSLGG-ARDTLV------NVPDNVIVADYVPQLELLPRADAVIHH--- 307 (406)
T ss_pred EEcCCcccH---HHHHHHHHHHHhcC-CcEEEEeccc-cccccc------cCCCceEEecCCCHHHHhhhcCEEEec---
Confidence 344555433 56666655555554 6777777643 211111 223333 45566777899999999976
Q ss_pred CCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEee----CCHHHHHHHHHHHHhCCCC
Q 008544 356 DVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTY----DGRNGFVEATLKALAEEPA 411 (562)
Q Consensus 356 E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~----~d~~~la~~i~~ll~~~~~ 411 (562)
|--.++.||+..|+|+|+-..+. .+-+++-..|... -+++.++++|+++++|+..
T Consensus 308 -GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~ 371 (406)
T COG1819 308 -GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVLADDSY 371 (406)
T ss_pred -CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHhcCHHH
Confidence 44668999999999999986653 5556666777654 2899999999999998663
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.019 Score=56.83 Aligned_cols=268 Identities=13% Similarity=0.015 Sum_probs=146.0
Q ss_pred hcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcH-HHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcCh
Q 008544 156 IIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYL-EYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSA 234 (562)
Q Consensus 156 ~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~ 234 (562)
..+..+.+-+++|+.+..... ...+..+..+.-.++|-.-. -| +....++.++...+++...+. ..+|+++.
T Consensus 34 ~a~~~r~~rff~HGqFn~~lw--lall~g~~~~~q~yWhiWGaDLY---e~~~~lk~rlfy~lRR~aq~r-vg~v~atr- 106 (322)
T PRK02797 34 KAKANRAQRFFLHGQFNPTLW--LALLSGKIKPKQFYWHIWGADLY---EESKGLKFRLFYPLRRLAQKR-VGHVFATR- 106 (322)
T ss_pred HHhhCccceEEEecCCCHHHH--HHHHhCCcCccceEEEEEChhhh---hcccchhHHHHHHHHHHHHhh-cCeEEEec-
Confidence 334456777888887655333 12344444443444442211 12 222444555555555544443 47777743
Q ss_pred hhhccCCCccccccccCCCCcCcchhhhHH-hhcCCCCCccEEEEEeec-cccCCHHHHHHHHHHHHHhcCCcEEEEE-e
Q 008544 235 ATQEYPNSIVCNVHGVNPKFLEIGEKKMEQ-QQNGNKAFTKGAYYIGRM-VWSKGYEELLGLLNIYHKELAGLEMDLY-G 311 (562)
Q Consensus 235 ~~~~~~~~~~~~v~GVd~~~~~~~~~~~~~-~~~~~~~~~~~il~vGr~-~~~Kg~~~ll~a~~~l~~~~~~~~l~iv-G 311 (562)
..-.+..+....+.|- .-+|++....... .........+..+.+|+- ++.-++.++++++.+.. ..++++++- |
T Consensus 107 GD~~~~a~~~~~v~~~-llyfpt~m~~~l~~~~~~~~~~~~~tIlvGNSgd~SN~Hie~L~~l~~~~--~~~v~ii~Pls 183 (322)
T PRK02797 107 GDLSYFAQRHPKVPGS-LLYFPTRMDPSLNTMANDRQRAGKMTILVGNSGDRSNRHIEALRALHQQF--GDNVKIIVPMG 183 (322)
T ss_pred chHHHHHHhcCCCCcc-EEecCCcchhhhccccccccCCCceEEEEeCCCCCcccHHHHHHHHHHHh--CCCeEEEEECC
Confidence 2222211111111100 0111111111100 000111223566677765 45667878888887664 347887774 4
Q ss_pred C--CCC--HHHHHHHHHhcCC--eeEEe---CCCCChHHHHhhcCEEEEcc-CCCCCcHHHHHHHHcCCcEEeeCC-CC-
Q 008544 312 N--GED--FDQIQRAAKKLKL--VVRVY---PGRDHADPIFHDYKVFLNPS-TTDVVCTATAEALAMGKIVVCANH-PS- 379 (562)
Q Consensus 312 ~--g~~--~~~l~~~~~~l~l--~~~~~---~~~~~~~~l~~~adv~v~pS-~~E~~~~~~lEAma~G~PVI~t~~-~~- 379 (562)
. |+. .+++++.++++-. ++.++ ...++..++++.||+.++.- +.++.|+.+ =.+..|+||+.++. +.
T Consensus 184 Yp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~-lLi~~G~~v~l~r~n~fw 262 (322)
T PRK02797 184 YPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLC-LLIQLGKPVVLSRDNPFW 262 (322)
T ss_pred cCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHH-HHHHCCCcEEEecCCchH
Confidence 4 332 4667777776644 34443 44566668999999998885 678888654 47899999999854 44
Q ss_pred ccccccCCceEee-C--CHHHHHHHHHHHHhCCCCCccHHHHhcCCHHHHHHHHHHHHHhcCcc
Q 008544 380 NDFFKQFPNCRTY-D--GRNGFVEATLKALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDV 440 (562)
Q Consensus 380 ~e~v~~~~~g~~~-~--d~~~la~~i~~ll~~~~~~l~~~ar~~~sw~~~~~~~~~~y~~~~~~ 440 (562)
.++.+.+..-+.. + |...+.++=+++...+...+ .|+-++..+.+.++++.+...
T Consensus 263 qdl~e~gv~Vlf~~d~L~~~~v~e~~rql~~~dk~~I------~Ff~pn~~~~W~~~l~~~~g~ 320 (322)
T PRK02797 263 QDLTEQGLPVLFTGDDLDEDIVREAQRQLASVDKNII------AFFSPNYLQGWRNALAIAAGE 320 (322)
T ss_pred HHHHhCCCeEEecCCcccHHHHHHHHHHHHhhCccee------eecCHhHHHHHHHHHHHhhCC
Confidence 7777666655433 2 55555555444443333222 288899999999999877643
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00033 Score=68.59 Aligned_cols=43 Identities=23% Similarity=0.261 Sum_probs=34.4
Q ss_pred eEEEEecccCC--CcccccccHHHHHHHHHHcCCCeEEEEeecCCc
Q 008544 51 HIAIFTTASLP--WLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSL 94 (562)
Q Consensus 51 rI~ivt~~~~P--~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~ 94 (562)
||++||.-+.| ..||-+.....|+++|+++| |+|+|++|.+..
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G-~~V~Vi~P~y~~ 45 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQG-HDVRVIMPKYGF 45 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT--EEEEEEE-THH
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcC-CeEEEEEccchh
Confidence 79999999999 56888899999999999998 999999997743
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.068 Score=52.73 Aligned_cols=219 Identities=13% Similarity=0.069 Sum_probs=122.3
Q ss_pred HHhHHhhcCcCCCcEEEe-cCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhcc
Q 008544 150 VGDITEIIPDEEADIAVL-EEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCH 227 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~-~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 227 (562)
...+.+++.+++||+.+. +++.. .+.+..++ |.|....+..... .++.+.-+ |+
T Consensus 73 ~~~L~ki~~~~kpdv~i~~~s~~l-------~rvafgLg~psIi~~D~ehA~~----------------qnkl~~Pl-a~ 128 (346)
T COG1817 73 VYKLSKIIAEFKPDVAIGKHSPEL-------PRVAFGLGIPSIIFVDNEHAEA----------------QNKLTLPL-AD 128 (346)
T ss_pred HHHHHHHHhhcCCceEeecCCcch-------hhHHhhcCCceEEecCChhHHH----------------Hhhcchhh-hh
Confidence 345888899999999876 33322 22444445 6665554322111 13333343 78
Q ss_pred EEEEcChhhhc----cC--CCccccccccCC----CCcCcchhhhHHhhcCCCCCccEEEE-----E-eeccccCCHHHH
Q 008544 228 KVIRLSAATQE----YP--NSIVCNVHGVNP----KFLEIGEKKMEQQQNGNKAFTKGAYY-----I-GRMVWSKGYEEL 291 (562)
Q Consensus 228 ~vi~~S~~~~~----~~--~~~~~~v~GVd~----~~~~~~~~~~~~~~~~~~~~~~~il~-----v-Gr~~~~Kg~~~l 291 (562)
.+++.+....+ .- ...+...+|+-. .-|.|+ ...-++.|+..+.+.|++ - .-..++++.+.+
T Consensus 129 ~ii~P~~~~~~~~~~~G~~p~~i~~~~giae~~~v~~f~pd--~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~ 206 (346)
T COG1817 129 VIITPEAIDEEELLDFGADPNKISGYNGIAELANVYGFVPD--PEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVL 206 (346)
T ss_pred heecccccchHHHHHhCCCccceecccceeEEeecccCCCC--HHHHHHcCCCCCCceEEEeeccccceeeccccchhhH
Confidence 88888754443 21 123444455422 223443 334556777765555442 1 123456677777
Q ss_pred HHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEe-CCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCC
Q 008544 292 LGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVY-PGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGK 370 (562)
Q Consensus 292 l~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~-~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~ 370 (562)
.++++.+.+.. .+++-.... .++..+. .++.+. -...|.-+++-.|++++-. -|+---||...|+
T Consensus 207 ~~li~~l~k~g----iV~ipr~~~---~~eife~--~~n~i~pk~~vD~l~Llyya~lvig~-----ggTMarEaAlLGt 272 (346)
T COG1817 207 PDLIKELKKYG----IVLIPREKE---QAEIFEG--YRNIIIPKKAVDTLSLLYYATLVIGA-----GGTMAREAALLGT 272 (346)
T ss_pred HHHHHHHHhCc----EEEecCchh---HHHHHhh--hccccCCcccccHHHHHhhhheeecC-----CchHHHHHHHhCC
Confidence 78887776542 444443222 2222221 122221 2233444677788888743 3778899999999
Q ss_pred cEEeeCCCC----ccccccCCceEee--CCHHHHHHHHHHHHhCCC
Q 008544 371 IVVCANHPS----NDFFKQFPNCRTY--DGRNGFVEATLKALAEEP 410 (562)
Q Consensus 371 PVI~t~~~~----~e~v~~~~~g~~~--~d~~~la~~i~~ll~~~~ 410 (562)
|.|.+..|- .++.. ..|.++ .|+.+..+...+.+.++.
T Consensus 273 paIs~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 273 PAISCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAVRNLKYRR 316 (346)
T ss_pred ceEEecCCccccccHHHH--hcCceeecCCHHHHHHHHHHHhhchh
Confidence 999998551 33332 456665 378888888888887765
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.01 Score=59.99 Aligned_cols=101 Identities=15% Similarity=0.175 Sum_probs=77.3
Q ss_pred CCChHHHHhhcCEEEEccC---CCC---CcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeCCHHHHHHHHHHHHhC
Q 008544 336 RDHADPIFHDYKVFLNPST---TDV---VCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYDGRNGFVEATLKALAE 408 (562)
Q Consensus 336 ~~~~~~l~~~adv~v~pS~---~E~---~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~d~~~la~~i~~ll~~ 408 (562)
.+.....++..|++++-++ .++ +.+.+.|+|+||.|-|+....+ ..++.+|..-.++.|.+++.+.+..++..
T Consensus 248 ~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~d~kdl~~~~~yll~h 327 (373)
T COG4641 248 KDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQDSKDLKEKLKYLLNH 327 (373)
T ss_pred cchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEecCHHHHHHHHHHHhcC
Confidence 4555677777888877643 233 3888999999999999998887 78888888888899999999999999999
Q ss_pred CCC--CccHHHH----hcCCHHHHHHHHHHHHHh
Q 008544 409 EPA--QPTDAQT----HQLSWESATERFLQVAEL 436 (562)
Q Consensus 409 ~~~--~l~~~ar----~~~sw~~~~~~~~~~y~~ 436 (562)
+.+ ++++.+. ..++.+.-...+++..+.
T Consensus 328 ~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 328 PDERKEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred cchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 865 6666554 457777666666555543
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.046 Score=52.45 Aligned_cols=188 Identities=15% Similarity=0.089 Sum_probs=104.2
Q ss_pred CcCCCcEEEecCCchhhhhhchHHHHhhcCC--EEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChh
Q 008544 158 PDEEADIAVLEEPEHLTWFHHGKRWKAKFRF--VVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAA 235 (562)
Q Consensus 158 ~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~--vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~ 235 (562)
.+..||+++..+-... .....+++++.. +|.+.+-..+ +. . -|.||..-..
T Consensus 67 p~~~Pdl~I~aGrrta---~l~~~lkk~~~~~~vVqI~~Prlp-~~---------------------~--fDlvivp~HD 119 (329)
T COG3660 67 PEQRPDLIITAGRRTA---PLAFYLKKKFGGIKVVQIQDPRLP-YN---------------------H--FDLVIVPYHD 119 (329)
T ss_pred ccCCCceEEecccchh---HHHHHHHHhcCCceEEEeeCCCCC-cc---------------------c--ceEEeccchh
Confidence 4567999999887655 223446777663 4444442222 11 1 1766666544
Q ss_pred hhccC---CCccccccccCCC----CcCcchhhhHHhhcCCCCCccEEEEEeeccccCCH-----HHHHHHHHHHHHhcC
Q 008544 236 TQEYP---NSIVCNVHGVNPK----FLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGY-----EELLGLLNIYHKELA 303 (562)
Q Consensus 236 ~~~~~---~~~~~~v~GVd~~----~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~-----~~ll~a~~~l~~~~~ 303 (562)
-.+.. ...+..++|...+ +..+... . .+.........+.++||.-.+.-.+ ..+..++.+...+ .
T Consensus 120 ~~~~~s~~~~Nilpi~Gs~h~Vt~~~lAa~~e-~-~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~-~ 196 (329)
T COG3660 120 WREELSDQGPNILPINGSPHNVTSQRLAALRE-A-FKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN-Q 196 (329)
T ss_pred hhhhhhccCCceeeccCCCCcccHHHhhhhHH-H-HHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh-C
Confidence 44321 1223333454332 2222111 1 1122222336678899976555444 2333333333322 2
Q ss_pred CcEEEEEeCCCCHHHHHHHHHh-cC-CeeEEeCC----CCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCC
Q 008544 304 GLEMDLYGNGEDFDQIQRAAKK-LK-LVVRVYPG----RDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANH 377 (562)
Q Consensus 304 ~~~l~ivG~g~~~~~l~~~~~~-l~-l~~~~~~~----~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~ 377 (562)
...+++--+....+.+++.++. +. ....++.+ .+...++++.||.+|.+.-+ =.-.-||.+.|+||-+...
T Consensus 197 g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaDS---inM~sEAasTgkPv~~~~~ 273 (329)
T COG3660 197 GGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTADS---INMCSEAASTGKPVFILEP 273 (329)
T ss_pred CceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEecch---hhhhHHHhccCCCeEEEec
Confidence 5778887776666777777765 32 22445443 45566999999999987432 2246799999999988755
Q ss_pred C
Q 008544 378 P 378 (562)
Q Consensus 378 ~ 378 (562)
+
T Consensus 274 ~ 274 (329)
T COG3660 274 P 274 (329)
T ss_pred C
Confidence 3
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0059 Score=62.71 Aligned_cols=91 Identities=13% Similarity=-0.018 Sum_probs=62.0
Q ss_pred cEEEEEeecc--ccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEE
Q 008544 274 KGAYYIGRMV--WSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLN 351 (562)
Q Consensus 274 ~~il~vGr~~--~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~ 351 (562)
.+.++-|.-. -.+.+..+++++.++.++. ..+++.+... .+.+++...+.. ...+. ++..++|+.||+.+.
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~~-~~~i~~~~~~~~-~~~~~---~~~~~~m~~aDlal~ 241 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFFK-GKDLKEIYGDIS-EFEIS---YDTHKALLEAEFAFI 241 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCCc-HHHHHHHHhcCC-CcEEe---ccHHHHHHhhhHHHh
Confidence 3445555321 1345677789998887653 7788877643 456666554322 23344 255689999999998
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEeeC
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCAN 376 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t~ 376 (562)
.| |++.+|++.+|+|.|..-
T Consensus 242 ~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 242 CS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred cC-----cHHHHHHHHhCCCEEEEE
Confidence 87 889999999999988853
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.11 Score=52.07 Aligned_cols=130 Identities=15% Similarity=0.126 Sum_probs=76.7
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcE---EEEEeCCCCHHHHHHHHHhcC--CeeEEeCCCCChHHHHhhcC
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLE---MDLYGNGEDFDQIQRAAKKLK--LVVRVYPGRDHADPIFHDYK 347 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~---l~ivG~g~~~~~l~~~~~~l~--l~~~~~~~~~~~~~l~~~ad 347 (562)
..+++.+|. -.-|.+++..+++.. ...|+++ +++.|.--..++.+++...-. ..+.++...++..++++.|+
T Consensus 220 ~~Ilvs~GG--G~dG~eLi~~~l~A~-~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~ 296 (400)
T COG4671 220 FDILVSVGG--GADGAELIETALAAA-QLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGAR 296 (400)
T ss_pred ceEEEecCC--ChhhHHHHHHHHHHh-hhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhh
Confidence 456666764 334555444444332 3334544 444454222333333333322 35788888999999999999
Q ss_pred EEEEccCCCCCcHHHHHHHHcCCcEEeeCCC--Cccc-ccc---CCceEe---e-C--CHHHHHHHHHHHHhCC
Q 008544 348 VFLNPSTTDVVCTATAEALAMGKIVVCANHP--SNDF-FKQ---FPNCRT---Y-D--GRNGFVEATLKALAEE 409 (562)
Q Consensus 348 v~v~pS~~E~~~~~~lEAma~G~PVI~t~~~--~~e~-v~~---~~~g~~---~-~--d~~~la~~i~~ll~~~ 409 (562)
..|.-+ | =+++.|-+++|||.+.-... +.|- +.. .+-|++ . + +++.++++|..+++.|
T Consensus 297 ~vVSm~---G-YNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~P 366 (400)
T COG4671 297 LVVSMG---G-YNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALARP 366 (400)
T ss_pred eeeecc---c-chhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccCC
Confidence 988654 2 25788999999997665443 3222 211 233333 1 2 6788888888888754
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.0002 Score=65.72 Aligned_cols=103 Identities=16% Similarity=0.248 Sum_probs=63.6
Q ss_pred CcEEEE-EeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC---
Q 008544 304 GLEMDL-YGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS--- 379 (562)
Q Consensus 304 ~~~l~i-vG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~--- 379 (562)
++++++ .|.. ..+.........+.++.+++..+++.++|+.||+.|.- +-+.++.|++++|+|.|.-..+.
T Consensus 31 ~~~viv~~G~~-~~~~~~~~~~~~~~~v~~~~~~~~m~~~m~~aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~ 105 (167)
T PF04101_consen 31 NIQVIVQTGKN-NYEELKIKVENFNPNVKVFGFVDNMAELMAAADLVISH----AGAGTIAEALALGKPAIVIPLPGAAD 105 (167)
T ss_dssp HCCCCCCCTTC-ECHHHCCCHCCTTCCCEEECSSSSHHHHHHHHSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T
T ss_pred CcEEEEEECCC-cHHHHHHHHhccCCcEEEEechhhHHHHHHHcCEEEeC----CCccHHHHHHHcCCCeeccCCCCcch
Confidence 355544 4544 33333333444445678888888899999999988853 34679999999999987654432
Q ss_pred ------ccccccCCceEeeC----CHHHHHHHHHHHHhCCCC
Q 008544 380 ------NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPA 411 (562)
Q Consensus 380 ------~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~ 411 (562)
...+.+...+..+. +++.+.++|.++++++..
T Consensus 106 ~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~~~ 147 (167)
T PF04101_consen 106 NHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLSDPEK 147 (167)
T ss_dssp -CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCCHH-
T ss_pred HHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcCcHH
Confidence 22233333344331 577899999998887764
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.34 Score=48.90 Aligned_cols=156 Identities=16% Similarity=0.063 Sum_probs=96.2
Q ss_pred ccEEEEEeec-cccCCHHHHHHHHHHHHHhcCCcEEEE-EeCCCC----HHHHHHHHHhcCC--eeEEe---CCCCChHH
Q 008544 273 TKGAYYIGRM-VWSKGYEELLGLLNIYHKELAGLEMDL-YGNGED----FDQIQRAAKKLKL--VVRVY---PGRDHADP 341 (562)
Q Consensus 273 ~~~il~vGr~-~~~Kg~~~ll~a~~~l~~~~~~~~l~i-vG~g~~----~~~l~~~~~~l~l--~~~~~---~~~~~~~~ 341 (562)
.+.-+.+|+- ++.-+..++++++.+.. ..++++++ .|.|.. .+++++.++++-. ++.++ .+.++.-+
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~ 261 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLA 261 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHH
Confidence 4555677765 45667877777776533 34688776 455542 4666677766532 34443 44566668
Q ss_pred HHhhcCEEEEcc-CCCCCcHHHHHHHHcCCcEEeeCCC-C-ccccccCCceEee-C--CHHHHHHHHHHHHhCCCCCccH
Q 008544 342 IFHDYKVFLNPS-TTDVVCTATAEALAMGKIVVCANHP-S-NDFFKQFPNCRTY-D--GRNGFVEATLKALAEEPAQPTD 415 (562)
Q Consensus 342 l~~~adv~v~pS-~~E~~~~~~lEAma~G~PVI~t~~~-~-~e~v~~~~~g~~~-~--d~~~la~~i~~ll~~~~~~l~~ 415 (562)
+++.||+.++.. +.++.|+ +.=.+.+|+||+-++.. - .++.+.+..-+.. + |.+.+.++=+++..-+...+.
T Consensus 262 lL~~cDl~if~~~RQQgiGn-I~lLl~~G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~~dk~~ia- 339 (360)
T PF07429_consen 262 LLSRCDLGIFNHNRQQGIGN-ICLLLQLGKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLANVDKQQIA- 339 (360)
T ss_pred HHHhCCEEEEeechhhhHhH-HHHHHHcCCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHhhCccccee-
Confidence 999999999997 5778775 55589999999999554 4 5555554434333 3 666777776666654443222
Q ss_pred HHHhcCCHHHHHHHHHHHHHhc
Q 008544 416 AQTHQLSWESATERFLQVAELV 437 (562)
Q Consensus 416 ~ar~~~sw~~~~~~~~~~y~~~ 437 (562)
|.-....+.+.++...+
T Consensus 340 -----Ff~pny~~~w~~~l~~~ 356 (360)
T PF07429_consen 340 -----FFAPNYLQGWRQALRLA 356 (360)
T ss_pred -----eeCCchHHHHHHHHHHH
Confidence 33344444444444433
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.62 Score=46.40 Aligned_cols=98 Identities=16% Similarity=0.118 Sum_probs=61.7
Q ss_pred EEEEEeeccccC--CHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcC-CeeEEeCCC---CChHHHHhhcCE
Q 008544 275 GAYYIGRMVWSK--GYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLK-LVVRVYPGR---DHADPIFHDYKV 348 (562)
Q Consensus 275 ~il~vGr~~~~K--g~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~-l~~~~~~~~---~~~~~l~~~adv 348 (562)
+++..|.-.+.| ..+...++++.+.++ +++++++|..++.+..++..+..+ ..+..+.+. .+...+++.+|+
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l 201 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADL 201 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCE
Confidence 334444433444 345777777777765 789999998766666666655442 223333333 344488889999
Q ss_pred EEEccCCCCCcHHHHHHHHcCCcEEeeCCCC
Q 008544 349 FLNPSTTDVVCTATAEALAMGKIVVCANHPS 379 (562)
Q Consensus 349 ~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~ 379 (562)
+|.+.. | ++--|.|+|+|+|+--.+.
T Consensus 202 ~I~~Ds----g-~~HlA~a~~~p~i~l~g~~ 227 (279)
T cd03789 202 VVTNDS----G-PMHLAAALGTPTVALFGPT 227 (279)
T ss_pred EEeeCC----H-HHHHHHHcCCCEEEEECCC
Confidence 997742 2 3444579999999885543
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.0023 Score=65.24 Aligned_cols=101 Identities=12% Similarity=0.100 Sum_probs=66.8
Q ss_pred ChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCC-ce-EeeC----CHH----HHHHHH
Q 008544 338 HADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFP-NC-RTYD----GRN----GFVEAT 402 (562)
Q Consensus 338 ~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~-~g-~~~~----d~~----~la~~i 402 (562)
|.+++.+.|++.|+||++|++|.+..|+-.||+|-|+|+..| .|.+++.. .| ++++ .++ +++.-|
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m 572 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFM 572 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHH
Confidence 566899999999999999999999999999999999998865 56665543 23 3332 444 455444
Q ss_pred HHHHhCCCC-CccHHHH-----hcCCHHHHHHHHHHHHHhcC
Q 008544 403 LKALAEEPA-QPTDAQT-----HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 403 ~~ll~~~~~-~l~~~ar-----~~~sw~~~~~~~~~~y~~~~ 438 (562)
.+....... ++-++.| .-++|..+...|.++-..+.
T Consensus 573 ~~F~~qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL 614 (692)
T KOG3742|consen 573 YEFCKQSRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLAL 614 (692)
T ss_pred HHHHHHHHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHH
Confidence 444332221 2222211 56788877766666544333
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.83 E-value=1.3 Score=45.59 Aligned_cols=99 Identities=14% Similarity=0.165 Sum_probs=66.7
Q ss_pred ccEEEEEe-eccccCCHH--HHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCC---CCChHHHHhhc
Q 008544 273 TKGAYYIG-RMVWSKGYE--ELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPG---RDHADPIFHDY 346 (562)
Q Consensus 273 ~~~il~vG-r~~~~Kg~~--~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~---~~~~~~l~~~a 346 (562)
..+++..| .-...|++. ...+.+..+.++. .++++.|+.++.+..+++.+..+..+. +.+ ..+...+++.|
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~~e~e~~~~i~~~~~~~~~-l~~k~sL~e~~~li~~a 252 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGPDEEERAEEIAKGLPNAVI-LAGKTSLEELAALIAGA 252 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecChHHHHHHHHHHHhcCCccc-cCCCCCHHHHHHHHhcC
Confidence 34566667 555677654 6667777777664 899999987666666677666653333 333 33444888899
Q ss_pred CEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC
Q 008544 347 KVFLNPSTTDVVCTATAEALAMGKIVVCANHPS 379 (562)
Q Consensus 347 dv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~ 379 (562)
|++|.+.. -.+-=|.|.|+|+|+--.+.
T Consensus 253 ~l~I~~DS-----g~~HlAaA~~~P~I~iyg~t 280 (334)
T COG0859 253 DLVIGNDS-----GPMHLAAALGTPTIALYGPT 280 (334)
T ss_pred CEEEccCC-----hHHHHHHHcCCCEEEEECCC
Confidence 99997753 24555789999999985543
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.09 Score=47.27 Aligned_cols=79 Identities=15% Similarity=0.126 Sum_probs=47.8
Q ss_pred HhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEE
Q 008544 154 TEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIR 231 (562)
Q Consensus 154 ~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~ 231 (562)
.+......+|+|++.+.-.+.-+ .-+...+. |++.++|.|-..|........ -..-.+.++....-||.|+.
T Consensus 52 ~~~~~~~~~dll~aTsmldLa~l---~gL~p~l~~~p~ilYFHENQl~YP~~~~~~r---d~~~~~~ni~saLaAD~v~F 125 (168)
T PF12038_consen 52 QQIPLSHSYDLLFATSMLDLATL---RGLRPDLANVPKILYFHENQLAYPVSPGQER---DFQYGMNNIYSALAADRVVF 125 (168)
T ss_pred hccccccCCCEEEeeccccHHHH---HhhccCCCCCCEEEEEecCcccCCCCCCccc---cccHHHHHHHHHHhceeeee
Confidence 44555677899999988766444 11332333 899999999555543322111 11122233333445899999
Q ss_pred cChhhhc
Q 008544 232 LSAATQE 238 (562)
Q Consensus 232 ~S~~~~~ 238 (562)
.|...++
T Consensus 126 NS~~nr~ 132 (168)
T PF12038_consen 126 NSAFNRD 132 (168)
T ss_pred cchhhHH
Confidence 9988887
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=95.67 E-value=3.1 Score=42.93 Aligned_cols=100 Identities=11% Similarity=0.177 Sum_probs=59.6
Q ss_pred ccEEEEEeeccccCCH--HHHHHHHHHHHHhcCCcEEEEEeCCCC--HHHHHHHHHhcCC-eeEEeCCCC---ChHHHHh
Q 008544 273 TKGAYYIGRMVWSKGY--EELLGLLNIYHKELAGLEMDLYGNGED--FDQIQRAAKKLKL-VVRVYPGRD---HADPIFH 344 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~--~~ll~a~~~l~~~~~~~~l~ivG~g~~--~~~l~~~~~~l~l-~~~~~~~~~---~~~~l~~ 344 (562)
..+++..|.-.+.|.+ +...+.+..+.+. +.+++++|...+ .+..++.++.... .+..+.+.. +...+++
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~--~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~ 261 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQAR--GYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALID 261 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHHHC--CCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHH
Confidence 4566677765566654 4666666666543 688888876432 2223444433221 222244433 3448889
Q ss_pred hcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC
Q 008544 345 DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS 379 (562)
Q Consensus 345 ~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~ 379 (562)
.||++|..- +. .+-=|.|+|+|+|+--.+.
T Consensus 262 ~a~l~v~nD---SG--p~HlAaA~g~P~v~lfGpt 291 (352)
T PRK10422 262 HAQLFIGVD---SA--PAHIAAAVNTPLICLFGAT 291 (352)
T ss_pred hCCEEEecC---CH--HHHHHHHcCCCEEEEECCC
Confidence 999999664 22 3445678899999875443
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.38 Score=48.72 Aligned_cols=103 Identities=17% Similarity=0.120 Sum_probs=67.9
Q ss_pred ccEEEEEeeccccC--CHH---HHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcC---CeeEEeCC--CCChHHH
Q 008544 273 TKGAYYIGRMVWSK--GYE---ELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLK---LVVRVYPG--RDHADPI 342 (562)
Q Consensus 273 ~~~il~vGr~~~~K--g~~---~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~---l~~~~~~~--~~~~~~l 342 (562)
..+.+.+|.-+..- +.+ .+++.+..+.+..+ ..+.|..+..-.++.++...++- ..+.++.+ .+...++
T Consensus 147 p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~ 225 (311)
T PF06258_consen 147 PRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLGF 225 (311)
T ss_pred CeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHHH
Confidence 55677888533322 223 66777777776664 88999998665544444443322 23445533 4556699
Q ss_pred HhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC
Q 008544 343 FHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS 379 (562)
Q Consensus 343 ~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~ 379 (562)
|+.||.++.+.-+ -.-+.||++.|+||..-..++
T Consensus 226 La~ad~i~VT~DS---vSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 226 LAAADAIVVTEDS---VSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred HHhCCEEEEcCcc---HHHHHHHHHcCCCEEEecCCC
Confidence 9999999987433 335899999999999987753
|
The function of this family is unknown. |
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.16 Score=53.00 Aligned_cols=178 Identities=10% Similarity=0.024 Sum_probs=87.2
Q ss_pred ccEEEEcChhhhccCCCc------cccccccCC--CCcCcch--hhhHHhhcCCCCCccEEEEEeeccccCC------HH
Q 008544 226 CHKVIRLSAATQEYPNSI------VCNVHGVNP--KFLEIGE--KKMEQQQNGNKAFTKGAYYIGRMVWSKG------YE 289 (562)
Q Consensus 226 ad~vi~~S~~~~~~~~~~------~~~v~GVd~--~~~~~~~--~~~~~~~~~~~~~~~~il~vGr~~~~Kg------~~ 289 (562)
.|.+++.|+..++...+. ...+.|..- ..+.... ........+.+.++++|+|+-....... ..
T Consensus 135 ~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~~~ 214 (369)
T PF04464_consen 135 YDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRNDYLFNKSKENRNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKFFF 214 (369)
T ss_dssp -SEEEESSHHHHHHHHHHTT--GGGEEES--GGGHHHHHSTT-HHHHHHHHTT--SS-EEEEEE----GGG--GGSS---
T ss_pred CcEEEECCHHHHHHHHHHhccCcceEEEeCCCeEhHHhccCHHHHHHHHHHhccCCCCcEEEEeeccccccccccccccc
Confidence 599999998888742211 111224322 1111111 1223445677777889999865432222 12
Q ss_pred HHH--HHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHH
Q 008544 290 ELL--GLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALA 367 (562)
Q Consensus 290 ~ll--~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma 367 (562)
..+ +.+. ....+++.+++-............ ......+.......+..+++..+|++|-= ++..+.|++.
T Consensus 215 ~~~~~~~l~--~~~~~~~~li~k~Hp~~~~~~~~~-~~~~~~i~~~~~~~~~~~ll~~aDiLITD-----ySSi~fD~~~ 286 (369)
T PF04464_consen 215 SDLDFEKLN--FLLKNNYVLIIKPHPNMKKKFKDF-KEDNSNIIFVSDNEDIYDLLAAADILITD-----YSSIIFDFLL 286 (369)
T ss_dssp -TT-HHHHH--HHHTTTEEEEE--SHHHHTT-----TT-TTTEEE-TT-S-HHHHHHT-SEEEES-----S-THHHHHGG
T ss_pred cccCHHHHH--HHhCCCcEEEEEeCchhhhchhhh-hccCCcEEECCCCCCHHHHHHhcCEEEEe-----chhHHHHHHH
Confidence 222 2232 223457888777642111111111 12233355556677888999999999843 4668999999
Q ss_pred cCCcEEee--CCCC----ccc---cccCCceEeeCCHHHHHHHHHHHHhCCCC
Q 008544 368 MGKIVVCA--NHPS----NDF---FKQFPNCRTYDGRNGFVEATLKALAEEPA 411 (562)
Q Consensus 368 ~G~PVI~t--~~~~----~e~---v~~~~~g~~~~d~~~la~~i~~ll~~~~~ 411 (562)
+++|||-. |... ..+ ..+...|-++.+.++|.++|..+++++..
T Consensus 287 l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~~~~~eL~~~i~~~~~~~~~ 339 (369)
T PF04464_consen 287 LNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIVYNFEELIEAIENIIENPDE 339 (369)
T ss_dssp GT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EESSHHHHHHHHTTHHHHHHH
T ss_pred hCCCEEEEeccHHHHhhccCCCCchHhhCCCceeCCHHHHHHHHHhhhhCCHH
Confidence 99999965 3321 111 22334466678999999999998876543
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.21 Score=54.30 Aligned_cols=125 Identities=15% Similarity=-0.008 Sum_probs=72.7
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEc
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNP 352 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~p 352 (562)
..+.+..|.+.. .-.+..++++.+..++.|+ ++++.-.+.....+. .++.+ ...-+..++++...+-++=
T Consensus 277 ~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~~~-~~iW~~~~~~~~~l~-------~n~~~-~~W~PQ~~lL~hp~v~~fi 346 (500)
T PF00201_consen 277 GVVYVSFGSIVS-SMPEEKLKEIAEAFENLPQ-RFIWKYEGEPPENLP-------KNVLI-VKWLPQNDLLAHPRVKLFI 346 (500)
T ss_dssp EEEEEE-TSSST-T-HHHHHHHHHHHHHCSTT-EEEEEETCSHGCHHH-------TTEEE-ESS--HHHHHTSTTEEEEE
T ss_pred CEEEEecCcccc-hhHHHHHHHHHHHHhhCCC-ccccccccccccccc-------ceEEE-eccccchhhhhcccceeee
Confidence 344556677653 3445555555555566776 777776653222221 13333 3344566888766543333
Q ss_pred cCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC----CHHHHHHHHHHHHhCC
Q 008544 353 STTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEE 409 (562)
Q Consensus 353 S~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~ 409 (562)
+. |--.++.||+.+|+|+|+-..-+ ...+.+...|...+ +.+++.++|.++++|+
T Consensus 347 tH--gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~vl~~~ 410 (500)
T PF00201_consen 347 TH--GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAIREVLENP 410 (500)
T ss_dssp ES----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHHHHHSH
T ss_pred ec--cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHHHHHHHhhh
Confidence 32 55778999999999999987643 44455555566543 7899999999999874
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.49 Score=46.93 Aligned_cols=99 Identities=13% Similarity=0.132 Sum_probs=65.4
Q ss_pred ccEEEEEeecccc-------CCHHHHHHHHHHHHHhcCCcEEEEEeCCCC-----HHHHHHHHHhcCCeeEEeCCCCChH
Q 008544 273 TKGAYYIGRMVWS-------KGYEELLGLLNIYHKELAGLEMDLYGNGED-----FDQIQRAAKKLKLVVRVYPGRDHAD 340 (562)
Q Consensus 273 ~~~il~vGr~~~~-------Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~-----~~~l~~~~~~l~l~~~~~~~~~~~~ 340 (562)
++.|++.....+. .....+++.+..+.+..|+.++++-=...+ ...+.+... ...+.++....+..
T Consensus 117 ~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 194 (269)
T PF05159_consen 117 KKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPN--LPNVVIIDDDVNLY 194 (269)
T ss_pred CCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhc--CCCeEEECCCCCHH
Confidence 4555555554433 255677788888888888999887654211 122222211 22244556667888
Q ss_pred HHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCC
Q 008544 341 PIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHP 378 (562)
Q Consensus 341 ~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~ 378 (562)
+++..||.++.-+ +++-+|||.+|+|||+...+
T Consensus 195 ~Ll~~s~~Vvtin-----StvGlEAll~gkpVi~~G~~ 227 (269)
T PF05159_consen 195 ELLEQSDAVVTIN-----STVGLEALLHGKPVIVFGRA 227 (269)
T ss_pred HHHHhCCEEEEEC-----CHHHHHHHHcCCceEEecCc
Confidence 9999999777543 67899999999999998664
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=94.57 E-value=7.6 Score=41.28 Aligned_cols=116 Identities=11% Similarity=0.120 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEeC-------CCC-HHHHHHHHHhcCCe--eEEe-CCCCChH--HHHhhcCEEEEccCC
Q 008544 289 EELLGLLNIYHKELAGLEMDLYGN-------GED-FDQIQRAAKKLKLV--VRVY-PGRDHAD--PIFHDYKVFLNPSTT 355 (562)
Q Consensus 289 ~~ll~a~~~l~~~~~~~~l~ivG~-------g~~-~~~l~~~~~~l~l~--~~~~-~~~~~~~--~l~~~adv~v~pS~~ 355 (562)
..+.+++..+.++ +.+++++-. +++ ....++..+.+.-. .++. ....+.+ .+++.||++|-.-.+
T Consensus 260 ~~la~~i~~Li~~--g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~RlH 337 (426)
T PRK10017 260 KAFAGVVNRIIDE--GYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRLH 337 (426)
T ss_pred HHHHHHHHHHHHC--CCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCCCChHHHHHHHhhCCEEEEecch
Confidence 3455666666555 455555543 233 23334444444322 2343 3334444 889999999977544
Q ss_pred CCCcHHHHHHHHcCCcEEeeCCCC--ccccccC-CceEee--C--CHHHHHHHHHHHHhCCCC
Q 008544 356 DVVCTATAEALAMGKIVVCANHPS--NDFFKQF-PNCRTY--D--GRNGFVEATLKALAEEPA 411 (562)
Q Consensus 356 E~~~~~~lEAma~G~PVI~t~~~~--~e~v~~~-~~g~~~--~--d~~~la~~i~~ll~~~~~ 411 (562)
.++=|+++|+|+|+-.... ..++.+- ...+.. + +.+++.+.+.+++++.+.
T Consensus 338 -----a~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~r~~ 395 (426)
T PRK10017 338 -----SAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPA 395 (426)
T ss_pred -----HHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHhCHHH
Confidence 6788999999999986643 4444322 122322 2 678899999999987654
|
|
| >PF15024 Glyco_transf_18: Glycosyltransferase family 18 | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.44 Score=51.19 Aligned_cols=150 Identities=21% Similarity=0.226 Sum_probs=98.4
Q ss_pred ccEEEEEeecc-ccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEE
Q 008544 273 TKGAYYIGRMV-WSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLN 351 (562)
Q Consensus 273 ~~~il~vGr~~-~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~ 351 (562)
....+..|+-. .+||-+..++++.+ +-+++-.+.+.......+-..++++|+ ....+..++++.+.+||-
T Consensus 277 ~~~AlVyGK~~~~w~~k~~~l~~l~~----~~eih~tV~~~~~~~~~~P~~V~NHG~-----l~~~ef~~lL~~akvfiG 347 (559)
T PF15024_consen 277 KNQALVYGKERYMWKGKEKYLDVLHK----YMEIHGTVYDEPQRPPNVPSFVKNHGI-----LSGDEFQQLLRKAKVFIG 347 (559)
T ss_pred cceeEEEccchhhhcCcHHHHHHHHh----hcEEEEEeccCCCCCcccchhhhhcCc-----CCHHHHHHHHHhhhEeee
Confidence 34555666543 36788888888744 335666665543323445555555554 456677799999999997
Q ss_pred ccC-CCCCcHHHHHHHHcCCcEEeeCCC---C---cccccc-------------------CCceEee--CCHHHHHHHHH
Q 008544 352 PST-TDVVCTATAEALAMGKIVVCANHP---S---NDFFKQ-------------------FPNCRTY--DGRNGFVEATL 403 (562)
Q Consensus 352 pS~-~E~~~~~~lEAma~G~PVI~t~~~---~---~e~v~~-------------------~~~g~~~--~d~~~la~~i~ 403 (562)
... +| |=+.+||+|+|+|.|-.... + .+++.+ .+..+.+ +|.+++.+||+
T Consensus 348 lGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhVytVd~~n~~~v~~Avk 425 (559)
T PF15024_consen 348 LGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHVYTVDINNSTEVEAAVK 425 (559)
T ss_pred cCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeEEEEcCCCHHHHHHHHH
Confidence 643 55 34789999999999987532 1 223322 2333444 49999999999
Q ss_pred HHHhCCCCCccHHHHhcCCHHHHHHHHHHHHHh
Q 008544 404 KALAEEPAQPTDAQTHQLSWESATERFLQVAEL 436 (562)
Q Consensus 404 ~ll~~~~~~l~~~ar~~~sw~~~~~~~~~~y~~ 436 (562)
++++.+....-. .+|+-+.+.+|+..+.+.
T Consensus 426 ~il~~~v~Py~P---~efT~egmLeRv~~~ie~ 455 (559)
T PF15024_consen 426 AILATPVEPYLP---YEFTCEGMLERVNALIEK 455 (559)
T ss_pred HHHhcCCCCcCC---cccCHHHHHHHHHHHHHh
Confidence 999987652111 468888999988766653
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=92.91 E-value=2.7 Score=45.28 Aligned_cols=127 Identities=11% Similarity=-0.029 Sum_probs=73.3
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEc
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNP 352 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~p 352 (562)
..+.+..|..... ..+.+-+.+..+... +.+++++..++ ...+.+... .+..+. +.-+..+++...++..+-
T Consensus 275 ~vvyvsfGs~~~~-~~~~~~~~~~~l~~~--~~~~lw~~~~~-~~~~~~~~~---~~~~v~-~w~pQ~~iL~h~~v~~fv 346 (459)
T PLN02448 275 SVLYVSLGSFLSV-SSAQMDEIAAGLRDS--GVRFLWVARGE-ASRLKEICG---DMGLVV-PWCDQLKVLCHSSVGGFW 346 (459)
T ss_pred ceEEEeecccccC-CHHHHHHHHHHHHhC--CCCEEEEEcCc-hhhHhHhcc---CCEEEe-ccCCHHHHhccCccceEE
Confidence 3455666765331 223333333333332 56777765533 222333221 123333 566777899888873333
Q ss_pred cCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccC-CceEee---------CCHHHHHHHHHHHHhCC
Q 008544 353 STTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQF-PNCRTY---------DGRNGFVEATLKALAEE 409 (562)
Q Consensus 353 S~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~-~~g~~~---------~d~~~la~~i~~ll~~~ 409 (562)
+. +--.+++||+++|+|+|+-...+ ...+.+. ..|+-+ -+.+++.+++++++.++
T Consensus 347 tH--gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~ 416 (459)
T PLN02448 347 TH--CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLE 416 (459)
T ss_pred ec--CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCC
Confidence 32 44568999999999999987654 3334332 334332 26789999999999875
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.52 Score=53.19 Aligned_cols=133 Identities=13% Similarity=0.004 Sum_probs=89.5
Q ss_pred CCCCccEEEEEeeccccCCHHH-HHHHHH---HHHHhc----CCcEEEEEeCCC---C-H----HHHHHHHH------hc
Q 008544 269 NKAFTKGAYYIGRMVWSKGYEE-LLGLLN---IYHKEL----AGLEMDLYGNGE---D-F----DQIQRAAK------KL 326 (562)
Q Consensus 269 ~~~~~~~il~vGr~~~~Kg~~~-ll~a~~---~l~~~~----~~~~l~ivG~g~---~-~----~~l~~~~~------~l 326 (562)
+.++...++++-|+..+|...+ ++..+. +++..- ...++++.|.-. . . +.+.+.++ ..
T Consensus 539 ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v 618 (815)
T PRK14986 539 VNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQI 618 (815)
T ss_pred cCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhh
Confidence 3455667788889999999888 655544 444321 236777777621 1 1 22223333 11
Q ss_pred CC--eeEEeCCCC--ChHHHHhhcCEEEEccC--CCCCcHHHHHHHHcCCcEEeeCCCC-cccccc--CCceEeeC-CHH
Q 008544 327 KL--VVRVYPGRD--HADPIFHDYKVFLNPST--TDVVCTATAEALAMGKIVVCANHPS-NDFFKQ--FPNCRTYD-GRN 396 (562)
Q Consensus 327 ~l--~~~~~~~~~--~~~~l~~~adv~v~pS~--~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~--~~~g~~~~-d~~ 396 (562)
+. ++.|+..++ -.+.++..+|+-.+.|+ .|..|+.=+=+|.-|.+.+.|--|. .|+.++ +.|||++. +.+
T Consensus 619 ~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~~~ 698 (815)
T PRK14986 619 GDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAE 698 (815)
T ss_pred cCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCCCHH
Confidence 21 344555543 33378889999999886 8999999999999999999997776 777765 78999996 555
Q ss_pred HHHHH
Q 008544 397 GFVEA 401 (562)
Q Consensus 397 ~la~~ 401 (562)
++.+.
T Consensus 699 ev~~~ 703 (815)
T PRK14986 699 EVEAL 703 (815)
T ss_pred HHHHH
Confidence 55443
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=92.51 E-value=2.4 Score=45.58 Aligned_cols=100 Identities=9% Similarity=0.033 Sum_probs=64.3
Q ss_pred CCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC--------CHHHHHH
Q 008544 334 PGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD--------GRNGFVE 400 (562)
Q Consensus 334 ~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~--------d~~~la~ 400 (562)
.+.....++++..++..+-|. +--++++||+++|+|+|+-...+ ...+..-..|..++ +.+++.+
T Consensus 344 ~~W~PQ~~IL~H~~v~~FvtH--cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~ 421 (472)
T PLN02670 344 VGWVPQVKILSHESVGGFLTH--CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAE 421 (472)
T ss_pred eCcCCHHHHhcCcccceeeec--CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHH
Confidence 455667788888776444333 34578999999999999986643 33444445565541 5789999
Q ss_pred HHHHHHhCCCC-CccHHHH-------hcCCHHHHHHHHHHHHH
Q 008544 401 ATLKALAEEPA-QPTDAQT-------HQLSWESATERFLQVAE 435 (562)
Q Consensus 401 ~i~~ll~~~~~-~l~~~ar-------~~~sw~~~~~~~~~~y~ 435 (562)
+|.+++.+++. .++++++ ..=.-+.+++.+++...
T Consensus 422 av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~ 464 (472)
T PLN02670 422 SVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLR 464 (472)
T ss_pred HHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHH
Confidence 99999987542 4444433 33444555555555433
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=92.37 E-value=0.72 Score=42.21 Aligned_cols=91 Identities=16% Similarity=0.137 Sum_probs=49.6
Q ss_pred cCCCcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcH------HHHhhhhchHHHHHHHHH---HHHHHHHHhcc
Q 008544 159 DEEADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYL------EYVKREKNDRLQAFLLEF---VNSWLARVHCH 227 (562)
Q Consensus 159 ~~~pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~~ad 227 (562)
.+.||||+.|....-.++ ++.-+. |++.++-..|. .+....... ......-. ....+....||
T Consensus 64 Gf~PDvI~~H~GWGe~Lf-----lkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~p~~-~~~~~~~r~rN~~~l~~l~~~D 137 (171)
T PF12000_consen 64 GFVPDVIIAHPGWGETLF-----LKDVFPDAPLIGYFEFYYRASGADVGFDPEFPPS-LDDRARLRMRNAHNLLALEQAD 137 (171)
T ss_pred CCCCCEEEEcCCcchhhh-----HHHhCCCCcEEEEEEEEecCCCCcCCCCCCCCCC-HHHHHHHHHHhHHHHHHHHhCC
Confidence 467899999988776555 555554 55554321110 000001111 11112111 12222222589
Q ss_pred EEEEcChhhhcc-C---CCcccccc-ccCCCCc
Q 008544 228 KVIRLSAATQEY-P---NSIVCNVH-GVNPKFL 255 (562)
Q Consensus 228 ~vi~~S~~~~~~-~---~~~~~~v~-GVd~~~~ 255 (562)
..++.|...+.. | ++++.+++ |||++.+
T Consensus 138 ~~isPT~wQ~~~fP~~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 138 AGISPTRWQRSQFPAEFRSKISVIHDGIDTDRF 170 (171)
T ss_pred cCcCCCHHHHHhCCHHHHcCcEEeecccchhhc
Confidence 999999999883 3 35566666 9998764
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=92.02 E-value=2.3 Score=45.97 Aligned_cols=170 Identities=11% Similarity=-0.019 Sum_probs=107.8
Q ss_pred HhhcCCCCCccEEEEEeecc-ccCCHHHHHHHHHHHHHhcCCcEEEEEeCCC-CHHHHHHHHHhcCCe-eEE-eCCCC--
Q 008544 264 QQQNGNKAFTKGAYYIGRMV-WSKGYEELLGLLNIYHKELAGLEMDLYGNGE-DFDQIQRAAKKLKLV-VRV-YPGRD-- 337 (562)
Q Consensus 264 ~~~~~~~~~~~~il~vGr~~-~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~-~~~~l~~~~~~l~l~-~~~-~~~~~-- 337 (562)
+...+++++..+ .+.+. -.|=-...++.+..+.+..|+..|++.-..- .++.++..+.++|++ .++ |.+..
T Consensus 750 r~~y~Lp~d~vv---f~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~p~riifs~va~k 826 (966)
T KOG4626|consen 750 RSQYGLPEDAVV---FCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLEPDRIIFSPVAAK 826 (966)
T ss_pred CCCCCCCCCeEE---EeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCCccceeeccccch
Confidence 445677765533 23333 2566668899999999999998888876522 147888999999987 333 55432
Q ss_pred -ChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-------ccccccCCceEeeCCHHHHHHHHHHHHhCC
Q 008544 338 -HADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-------NDFFKQFPNCRTYDGRNGFVEATLKALAEE 409 (562)
Q Consensus 338 -~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-------~e~v~~~~~g~~~~d~~~la~~i~~ll~~~ 409 (562)
+.-.-...+||.+-+...-| -++-.|.+.+|+|+|+-.... .....-|..-++..+.+|..+.-.++-.|.
T Consensus 827 ~eHvrr~~LaDv~LDTplcnG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak~~eEY~~iaV~Latd~ 905 (966)
T KOG4626|consen 827 EEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAKNREEYVQIAVRLATDK 905 (966)
T ss_pred HHHHHhhhhhhhcccCcCcCC-cccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhhhHHHHHHHHHHhhcCH
Confidence 22255667899887766544 456789999999999875432 122222223344578888888777777766
Q ss_pred CC--CccHHHH------hcCCHHHHHHHHHHHHHhc
Q 008544 410 PA--QPTDAQT------HQLSWESATERFLQVAELV 437 (562)
Q Consensus 410 ~~--~l~~~ar------~~~sw~~~~~~~~~~y~~~ 437 (562)
+. .++.+-+ --|+-...+..+++.|...
T Consensus 906 ~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~M 941 (966)
T KOG4626|consen 906 EYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQM 941 (966)
T ss_pred HHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHH
Confidence 54 4443332 3455555555566555543
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=91.61 E-value=1.4 Score=36.15 Aligned_cols=73 Identities=8% Similarity=0.078 Sum_probs=53.1
Q ss_pred EEEEeC-CCCHHHHHHHHHhcCCeeEEe---CCCCC----hHHHHhhcCEEEEccC---CCCCcHHHHHHHHcCCcEEee
Q 008544 307 MDLYGN-GEDFDQIQRAAKKLKLVVRVY---PGRDH----ADPIFHDYKVFLNPST---TDVVCTATAEALAMGKIVVCA 375 (562)
Q Consensus 307 l~ivG~-g~~~~~l~~~~~~l~l~~~~~---~~~~~----~~~l~~~adv~v~pS~---~E~~~~~~lEAma~G~PVI~t 375 (562)
++|+|. ......+++.+++.|....++ ++..+ .+..+..+|+.|++.. ++..-.+--+|-..|+|++.+
T Consensus 2 vliVGG~~~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~ 81 (97)
T PF10087_consen 2 VLIVGGREDRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYS 81 (97)
T ss_pred EEEEcCCcccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEE
Confidence 567775 345788999999999988878 33222 4567778898887753 444566677888899999999
Q ss_pred CCCC
Q 008544 376 NHPS 379 (562)
Q Consensus 376 ~~~~ 379 (562)
+..+
T Consensus 82 ~~~~ 85 (97)
T PF10087_consen 82 RSRG 85 (97)
T ss_pred CCCC
Confidence 8633
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=90.91 E-value=5.6 Score=42.61 Aligned_cols=72 Identities=15% Similarity=0.185 Sum_probs=51.4
Q ss_pred CCCChHHHHhhcCE--EEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccC-CceEee---CCHHHHHHHHH
Q 008544 335 GRDHADPIFHDYKV--FLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQF-PNCRTY---DGRNGFVEATL 403 (562)
Q Consensus 335 ~~~~~~~l~~~adv--~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~-~~g~~~---~d~~~la~~i~ 403 (562)
+.....+++...++ ||.- +--++++||+++|+|+|+-...+ ...+.+. ..|+.+ -+.++++++|+
T Consensus 330 ~w~PQ~~iL~h~~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~v~~av~ 405 (451)
T PLN02410 330 KWAPQKEVLSHPAVGGFWSH----CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGAVERAVK 405 (451)
T ss_pred ccCCHHHHhCCCccCeeeec----CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHHHHHHHH
Confidence 46677788888665 5532 34568999999999999986643 3333333 556554 28899999999
Q ss_pred HHHhCCC
Q 008544 404 KALAEEP 410 (562)
Q Consensus 404 ~ll~~~~ 410 (562)
+++.+++
T Consensus 406 ~lm~~~~ 412 (451)
T PLN02410 406 RLMVEEE 412 (451)
T ss_pred HHHcCCc
Confidence 9998754
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=90.71 E-value=0.96 Score=51.14 Aligned_cols=131 Identities=13% Similarity=0.037 Sum_probs=88.1
Q ss_pred CCCCccEEEEEeeccccCCHHH-HHHH---HHHHHHhcC-----CcEEEEEeCCC-C---HHHH----HHHHHh------
Q 008544 269 NKAFTKGAYYIGRMVWSKGYEE-LLGL---LNIYHKELA-----GLEMDLYGNGE-D---FDQI----QRAAKK------ 325 (562)
Q Consensus 269 ~~~~~~~il~vGr~~~~Kg~~~-ll~a---~~~l~~~~~-----~~~l~ivG~g~-~---~~~l----~~~~~~------ 325 (562)
+.++....+++-|+..+|...+ ++.. +.+++. .| ..++++.|.-. . .+.+ .+.++.
T Consensus 526 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~-~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~ 604 (797)
T cd04300 526 VDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKE-NPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPD 604 (797)
T ss_pred cCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHh-CCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChh
Confidence 3556777888999999999888 5555 444443 33 26677777621 1 1222 222221
Q ss_pred cC--CeeEEeCCCC--ChHHHHhhcCEEEEccC--CCCCcHHHHHHHHcCCcEEeeCCCC-cccccc--CCceEeeC-CH
Q 008544 326 LK--LVVRVYPGRD--HADPIFHDYKVFLNPST--TDVVCTATAEALAMGKIVVCANHPS-NDFFKQ--FPNCRTYD-GR 395 (562)
Q Consensus 326 l~--l~~~~~~~~~--~~~~l~~~adv~v~pS~--~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~--~~~g~~~~-d~ 395 (562)
.+ +++.|+..++ -.+.++..+|+-...|+ .|..|+.-+=+|.-|.+.++|--|. .|+.+. +.|+|++. +.
T Consensus 605 v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~ 684 (797)
T cd04300 605 VGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTA 684 (797)
T ss_pred cCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeCCCH
Confidence 11 1344555533 33488899999999885 8999999999999999999997775 666665 78999996 55
Q ss_pred HHHHH
Q 008544 396 NGFVE 400 (562)
Q Consensus 396 ~~la~ 400 (562)
++..+
T Consensus 685 ~ev~~ 689 (797)
T cd04300 685 EEVEA 689 (797)
T ss_pred HHHHH
Confidence 55543
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=90.66 E-value=2.5 Score=41.87 Aligned_cols=77 Identities=14% Similarity=0.139 Sum_probs=47.5
Q ss_pred CCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhh--h------chHHHHHHHHHHHHHHHHH--hccEE
Q 008544 161 EADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKRE--K------NDRLQAFLLEFVNSWLARV--HCHKV 229 (562)
Q Consensus 161 ~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~--~ad~v 229 (562)
+.||+|+.+.-..+++ +...+.+.+ |.+.+=|..|..-...+ . ...++..+.+.+.....-. .||.|
T Consensus 172 ~advyHsvstGyAgl~--g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I 249 (268)
T PF11997_consen 172 KADVYHSVSTGYAGLL--GALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRI 249 (268)
T ss_pred CCCEEecCCccHHHHH--HHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCee
Confidence 5699999988777666 455555555 99999998864322111 1 1234444444443332222 49999
Q ss_pred EEcChhhhcc
Q 008544 230 IRLSAATQEY 239 (562)
Q Consensus 230 i~~S~~~~~~ 239 (562)
++.++..++.
T Consensus 250 ~~l~~~n~~~ 259 (268)
T PF11997_consen 250 TPLYEYNREW 259 (268)
T ss_pred cccchhhHHH
Confidence 9999876653
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=90.52 E-value=3.1 Score=42.56 Aligned_cols=99 Identities=17% Similarity=0.158 Sum_probs=61.8
Q ss_pred cEEEEEee-ccccCCH--HHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCC---ChHHHHhhcC
Q 008544 274 KGAYYIGR-MVWSKGY--EELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRD---HADPIFHDYK 347 (562)
Q Consensus 274 ~~il~vGr-~~~~Kg~--~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~---~~~~l~~~ad 347 (562)
.+++..|. ..+.|.+ +...+.+..+.+. +.++++.|..++.+..++..+..+..+.-+.+.. +...+++.||
T Consensus 176 ~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~--~~~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali~~a~ 253 (334)
T TIGR02195 176 IIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ--GYQVVLFGSAKDHPAGNEIEALLPGELRNLAGETSLDEAVDLIALAK 253 (334)
T ss_pred EEEEcCCCCCCccCCCCHHHHHHHHHHHHHC--CCEEEEEEChhhHHHHHHHHHhCCcccccCCCCCCHHHHHHHHHhCC
Confidence 34456555 3356654 4667777666543 5889999987666666665554432222134433 4448889999
Q ss_pred EEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC
Q 008544 348 VFLNPSTTDVVCTATAEALAMGKIVVCANHPS 379 (562)
Q Consensus 348 v~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~ 379 (562)
++|..-. ..+-=|.|.|+|+|+--.+.
T Consensus 254 l~I~~DS-----Gp~HlAaA~~~P~i~lfG~t 280 (334)
T TIGR02195 254 AVVTNDS-----GLMHVAAALNRPLVALYGST 280 (334)
T ss_pred EEEeeCC-----HHHHHHHHcCCCEEEEECCC
Confidence 9997642 24455779999999874443
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=90.04 E-value=3.6 Score=45.98 Aligned_cols=131 Identities=12% Similarity=0.019 Sum_probs=77.1
Q ss_pred CCCCccEEEEEeeccccCCHHH-H---HHHHHHHHHhc----CCcEEEEEeCC-CCH---HHHHHHHHh----------c
Q 008544 269 NKAFTKGAYYIGRMVWSKGYEE-L---LGLLNIYHKEL----AGLEMDLYGNG-EDF---DQIQRAAKK----------L 326 (562)
Q Consensus 269 ~~~~~~~il~vGr~~~~Kg~~~-l---l~a~~~l~~~~----~~~~l~ivG~g-~~~---~~l~~~~~~----------l 326 (562)
+.++....+++-|+..+|...+ + ++.+.++++.- ..+++++.|.- |.. +++-+.+.+ .
T Consensus 440 ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v 519 (713)
T PF00343_consen 440 LDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEV 519 (713)
T ss_dssp --TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTT
T ss_pred CCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhh
Confidence 3455667889999999999887 3 34455555431 23678888872 221 223222221 1
Q ss_pred CC--eeEEeCCCC--ChHHHHhhcCEEEEccC--CCCCcHHHHHHHHcCCcEEeeCCCC-cccccc--CCceEeeC-CHH
Q 008544 327 KL--VVRVYPGRD--HADPIFHDYKVFLNPST--TDVVCTATAEALAMGKIVVCANHPS-NDFFKQ--FPNCRTYD-GRN 396 (562)
Q Consensus 327 ~l--~~~~~~~~~--~~~~l~~~adv~v~pS~--~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~--~~~g~~~~-d~~ 396 (562)
+. ++.|+..++ -.+.++..+||-.+.|+ .|..|+.-+=||.-|.+.+++--|. -|+.+. ..|.|++. +.+
T Consensus 520 ~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG~~~~ 599 (713)
T PF00343_consen 520 GDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFGLTAE 599 (713)
T ss_dssp CCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES-BHH
T ss_pred ccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcCCCHH
Confidence 11 344555543 22378889999999885 8999999999999999999997776 666543 46788885 555
Q ss_pred HHH
Q 008544 397 GFV 399 (562)
Q Consensus 397 ~la 399 (562)
++.
T Consensus 600 ev~ 602 (713)
T PF00343_consen 600 EVE 602 (713)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=89.99 E-value=3.9 Score=43.85 Aligned_cols=73 Identities=12% Similarity=0.108 Sum_probs=51.2
Q ss_pred CCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----cccccc-CCceEeeC--CHHHHHHHHHHHH
Q 008544 335 GRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQ-FPNCRTYD--GRNGFVEATLKAL 406 (562)
Q Consensus 335 ~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~-~~~g~~~~--d~~~la~~i~~ll 406 (562)
+..+..+++...++..+-+. +--.+++||+++|+|+|+-..-+ ...+.+ -..|+-+. +.++++++|++++
T Consensus 334 ~w~PQ~~iL~h~~v~~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~~v~~~l 411 (448)
T PLN02562 334 SWAPQLEVLKHQAVGCYLTH--CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEEGLRKVM 411 (448)
T ss_pred ecCCHHHHhCCCccceEEec--CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHHHHHHHh
Confidence 56677789988775444333 33568999999999999986643 333433 24455442 8899999999999
Q ss_pred hCC
Q 008544 407 AEE 409 (562)
Q Consensus 407 ~~~ 409 (562)
.++
T Consensus 412 ~~~ 414 (448)
T PLN02562 412 EDS 414 (448)
T ss_pred CCH
Confidence 764
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=89.45 E-value=2.6 Score=45.15 Aligned_cols=74 Identities=9% Similarity=-0.021 Sum_probs=51.9
Q ss_pred eCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----cccccc-CCceEee-------CCHHHHH
Q 008544 333 YPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQ-FPNCRTY-------DGRNGFV 399 (562)
Q Consensus 333 ~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~-~~~g~~~-------~d~~~la 399 (562)
..+..+..++++.+++..+-+. +--++++||+++|+|+|+-...+ ...+.+ -..|... -+.++++
T Consensus 338 v~~W~PQ~~iL~H~~v~~FvTH--~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l~ 415 (451)
T PLN03004 338 VKSWAPQVPVLNHKAVGGFVTH--CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEVE 415 (451)
T ss_pred EEeeCCHHHHhCCCccceEecc--CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCHHHHH
Confidence 3445667789999998444443 33568999999999999986643 334433 2555543 1778999
Q ss_pred HHHHHHHhC
Q 008544 400 EATLKALAE 408 (562)
Q Consensus 400 ~~i~~ll~~ 408 (562)
++|++++.+
T Consensus 416 ~av~~vm~~ 424 (451)
T PLN03004 416 KRVQEIIGE 424 (451)
T ss_pred HHHHHHhcC
Confidence 999999975
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=88.70 E-value=3.9 Score=43.78 Aligned_cols=74 Identities=9% Similarity=0.042 Sum_probs=52.0
Q ss_pred CCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccC-CceEeeC--------CHHHHHH
Q 008544 335 GRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQF-PNCRTYD--------GRNGFVE 400 (562)
Q Consensus 335 ~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~-~~g~~~~--------d~~~la~ 400 (562)
+.....++++..++..+-|. +--++++||+++|+|+|+-..-+ ...+.+. ..|.-+. +.+++.+
T Consensus 323 ~W~PQ~~iL~H~~v~~FvtH--cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~ 400 (449)
T PLN02173 323 KWSPQLQVLSNKAIGCFMTH--CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEF 400 (449)
T ss_pred CCCCHHHHhCCCccceEEec--CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHH
Confidence 55667789998875554443 44678999999999999986543 3444432 3444321 6799999
Q ss_pred HHHHHHhCCC
Q 008544 401 ATLKALAEEP 410 (562)
Q Consensus 401 ~i~~ll~~~~ 410 (562)
++.+++.+++
T Consensus 401 av~~vm~~~~ 410 (449)
T PLN02173 401 SIKEVMEGEK 410 (449)
T ss_pred HHHHHhcCCh
Confidence 9999998654
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.63 E-value=2.2 Score=47.78 Aligned_cols=123 Identities=14% Similarity=0.058 Sum_probs=84.2
Q ss_pred CCccEEEEEeeccccCCHHHHHHHHHHHHHh-----cCCcEEEEEeCC-CC---H----HHHHHHHHhcC--CeeEEeCC
Q 008544 271 AFTKGAYYIGRMVWSKGYEELLGLLNIYHKE-----LAGLEMDLYGNG-ED---F----DQIQRAAKKLK--LVVRVYPG 335 (562)
Q Consensus 271 ~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~-----~~~~~l~ivG~g-~~---~----~~l~~~~~~l~--l~~~~~~~ 335 (562)
++...++++-|+..+|.....+.-+..+.+. .|.+.+++.|.- |. . ..+...++..+ +++.|+.+
T Consensus 485 p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~n 564 (750)
T COG0058 485 PNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPN 564 (750)
T ss_pred CCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCC
Confidence 4566788888999999877655444433332 244666666652 11 1 22233333322 34556666
Q ss_pred CC--ChHHHHhhcCEEEEccC--CCCCcHHHHHHHHcCCcEEeeCCCC-ccccc--cCCceEeeC
Q 008544 336 RD--HADPIFHDYKVFLNPST--TDVVCTATAEALAMGKIVVCANHPS-NDFFK--QFPNCRTYD 393 (562)
Q Consensus 336 ~~--~~~~l~~~adv~v~pS~--~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~--~~~~g~~~~ 393 (562)
++ -.+.++..+|+-.+.|+ .|..|+.-+=||.-|.+-|+|--|. -|+.+ ++.|||++.
T Consensus 565 YdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 565 YDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred CChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 43 23378889999998875 8999999999999999999997776 67775 889999985
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.50 E-value=11 Score=40.83 Aligned_cols=76 Identities=9% Similarity=-0.075 Sum_probs=51.3
Q ss_pred eCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----cccc-ccCCceEeeC---------CHHH
Q 008544 333 YPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFF-KQFPNCRTYD---------GRNG 397 (562)
Q Consensus 333 ~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v-~~~~~g~~~~---------d~~~ 397 (562)
..+..+..+++...++..+-+. +--.+++||+++|+|+|+-..-+ ...+ +.-..|+..+ +.++
T Consensus 343 v~~w~PQ~~iL~h~~vg~fvtH--~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~ 420 (480)
T PLN00164 343 WPTWAPQKEILAHAAVGGFVTH--CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAE 420 (480)
T ss_pred EeecCCHHHHhcCcccCeEEee--cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHH
Confidence 4456677788998885433332 33458999999999999986543 2233 3334455431 5789
Q ss_pred HHHHHHHHHhCCC
Q 008544 398 FVEATLKALAEEP 410 (562)
Q Consensus 398 la~~i~~ll~~~~ 410 (562)
+.++|.+++.++.
T Consensus 421 l~~av~~vm~~~~ 433 (480)
T PLN00164 421 LERAVRSLMGGGE 433 (480)
T ss_pred HHHHHHHHhcCCc
Confidence 9999999998753
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=88.44 E-value=2.2 Score=41.41 Aligned_cols=99 Identities=16% Similarity=0.119 Sum_probs=54.6
Q ss_pred ccEEEEEeeccccCCHH--HHHHHHHHHHHhcCCcEEEEEeCCCC--HHHHHHHHHhcCCeeEEeCCCCChH---HHHhh
Q 008544 273 TKGAYYIGRMVWSKGYE--ELLGLLNIYHKELAGLEMDLYGNGED--FDQIQRAAKKLKLVVRVYPGRDHAD---PIFHD 345 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~--~ll~a~~~l~~~~~~~~l~ivG~g~~--~~~l~~~~~~l~l~~~~~~~~~~~~---~l~~~ 345 (562)
..+++..|.-.+.|.+. ...+.+..+.+.. ..++++|...+ .+..++..+.....+.-+.+..++. .+++.
T Consensus 106 ~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~ 183 (247)
T PF01075_consen 106 PYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISR 183 (247)
T ss_dssp SEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHT
T ss_pred CeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhc
Confidence 45677777766777754 4667777666553 78899998665 2333334333332233344434444 78889
Q ss_pred cCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCC
Q 008544 346 YKVFLNPSTTDVVCTATAEALAMGKIVVCANHP 378 (562)
Q Consensus 346 adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~ 378 (562)
+|++|.+- ...+-=|.|.|+|+|+--.+
T Consensus 184 a~~~I~~D-----tg~~HlA~a~~~p~v~lfg~ 211 (247)
T PF01075_consen 184 ADLVIGND-----TGPMHLAAALGTPTVALFGP 211 (247)
T ss_dssp SSEEEEES-----SHHHHHHHHTT--EEEEESS
T ss_pred CCEEEecC-----ChHHHHHHHHhCCEEEEecC
Confidence 99999774 22456678999999998443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=88.06 E-value=29 Score=34.22 Aligned_cols=292 Identities=18% Similarity=0.203 Sum_probs=128.2
Q ss_pred ccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCCcccccccccchhc
Q 008544 64 TGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAAD 143 (562)
Q Consensus 64 ~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~y~~r~~~~ 143 (562)
.|+..+..+.-++.-+.| |+++++... .-.|..++. +-...+.+..+...
T Consensus 1 CGVTr~a~e~~~wf~KNg-~~~~i~~a~------------e~sftR~ds-------------H~~~~~si~k~~~~---- 50 (355)
T PF11440_consen 1 CGVTRNALEMRDWFDKNG-VEFTIVSAD------------EKSFTRPDS-------------HDSKSFSIPKYLAK---- 50 (355)
T ss_dssp SHHHHHHHHHHHHHHHTT--EEEEEEET------------SS--TTTTS-------------SS-TTTEEEE-TTT----
T ss_pred CCccccHHHHHHHHHhcC-CeeEEEEec------------ccccCCccc-------------cccceeeeehhhHH----
Confidence 366677777878888888 999999761 111222221 11111333322110
Q ss_pred cchhhhHHhHHhhcCcCCCcEEEecCCchhhhh----hchHHHHhhcC---CEEEEEcCCcHHHHhhhhchHHHHHHHHH
Q 008544 144 KKSILAVGDITEIIPDEEADIAVLEEPEHLTWF----HHGKRWKAKFR---FVVGIVHTNYLEYVKREKNDRLQAFLLEF 216 (562)
Q Consensus 144 ~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~----~~~~~~~~~~~---~vi~~~h~~~~~~~~~~~~~~~~~~~~~~ 216 (562)
-...+.+.+. ++||+++.+.+....- -....+.++.+ .+|...|+...-...+ +. .
T Consensus 51 -----e~de~v~~vN--~yDI~m~nSvPa~~vqE~~iNnY~kii~~Ik~~ik~V~~~Hdh~~lsI~r--n~--------~ 113 (355)
T PF11440_consen 51 -----EYDETVKKVN--DYDIVMFNSVPATKVQEAIINNYEKIIKKIKPSIKVVGFMHDHNKLSIDR--NP--------Y 113 (355)
T ss_dssp -----HHHHHHHHHT--SSSEEEEEE--BTTS-HHHHHHHHHHHHCS-TTSEEEEEE---SHHHHTT--BS--------S
T ss_pred -----HHHHHHHHhh--ccCEEEEecccCchHHHHHHHHHHHHHHhccccceeEEEeeccceeeccc--cc--------c
Confidence 0112333333 6999988764332210 01133555555 3578888663322221 11 1
Q ss_pred HHHHHHHHhccEEEEcChhhh-------c-cCCCcccccccc--CC---CCcCcchhhhHHhhcCCCCCccEE---EEEe
Q 008544 217 VNSWLARVHCHKVIRLSAATQ-------E-YPNSIVCNVHGV--NP---KFLEIGEKKMEQQQNGNKAFTKGA---YYIG 280 (562)
Q Consensus 217 ~~~~~~~~~ad~vi~~S~~~~-------~-~~~~~~~~v~GV--d~---~~~~~~~~~~~~~~~~~~~~~~~i---l~vG 280 (562)
+...+.+ ||.|++.|...- + +|.+ .....-+ -+ ++-+|.+-..-+.........+.. +|+|
T Consensus 114 le~~m~~--~DvIfshs~~g~f~kv~m~~l~Ps~-~~l~~~i~~~p~v~nfqpp~~i~~~Rstywkd~se~nmnv~~yig 190 (355)
T PF11440_consen 114 LEGTMNE--MDVIFSHSDNGWFSKVLMKELLPSK-VSLFDRIKKFPMVFNFQPPMDINKYRSTYWKDVSEKNMNVNRYIG 190 (355)
T ss_dssp HHHHHHH---SEEEES-TTSHHHHTHHHHHS-SS---SSS-------EEE----B-HHHHHHHH---GGGSEEEEEEEE-
T ss_pred HHHHHHh--hcEEEeccccchHHHHHHHhhcccc-CchhhhhhhcceeeecCCcccHHHHHHHHhhhhHhhhcccceeee
Confidence 2334445 599999884321 2 2332 1111100 01 111111111122222222223333 6999
Q ss_pred eccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe-------------------eEEeCCCCChH-
Q 008544 281 RMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV-------------------VRVYPGRDHAD- 340 (562)
Q Consensus 281 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~-------------------~~~~~~~~~~~- 340 (562)
|..-.||+..+++.-++..+. ++++-++-|-....+.+ .+.+.+.. +.+++.+...+
T Consensus 191 R~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~A~~--~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E~ 267 (355)
T PF11440_consen 191 RQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSPAKI--SIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSEG 267 (355)
T ss_dssp -SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SSTHHH--HHHHTT--EEEE-CTGGGG---SSS--EEEESS--HHHH
T ss_pred eeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCCcee--eeecCCcccccCccccccCcccCCCCcceecchhhhHHH
Confidence 999999999999999887655 78888888863332211 12222222 44556654444
Q ss_pred -HHHhhcCEEEEcc------CCCCCcHHHHHHHHcCC-cEEeeCCCC-cc------ccccCCceEee---CCHHHHHHHH
Q 008544 341 -PIFHDYKVFLNPS------TTDVVCTATAEALAMGK-IVVCANHPS-ND------FFKQFPNCRTY---DGRNGFVEAT 402 (562)
Q Consensus 341 -~l~~~adv~v~pS------~~E~~~~~~lEAma~G~-PVI~t~~~~-~e------~v~~~~~g~~~---~d~~~la~~i 402 (562)
+.|+..-...--+ ..+..-.+-+|..|||. ||.-...|. .. -..+-+.|.++ +|.++-.+.|
T Consensus 268 ~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I~~De~dle~T~ekl 347 (355)
T PF11440_consen 268 LERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAIYFDENDLESTVEKL 347 (355)
T ss_dssp HHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-EEE-TTSHHHHHHHH
T ss_pred HHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcceeEeccchHHHHHHHH
Confidence 4555444433332 13457788999999997 555544432 22 12233445554 3777777777
Q ss_pred HHHHhC
Q 008544 403 LKALAE 408 (562)
Q Consensus 403 ~~ll~~ 408 (562)
.++.++
T Consensus 348 ~E~a~~ 353 (355)
T PF11440_consen 348 IEVANN 353 (355)
T ss_dssp HHHHT-
T ss_pred HHHhcc
Confidence 776654
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=87.80 E-value=8.7 Score=38.93 Aligned_cols=126 Identities=14% Similarity=0.041 Sum_probs=72.0
Q ss_pred ccEEEEEeeccccCCH--HHHHHHHHHHHHhcCCcEEEEEeCCCC-HHHHHHHHHhcCCeeEEeCC--CCChHHHHhhcC
Q 008544 273 TKGAYYIGRMVWSKGY--EELLGLLNIYHKELAGLEMDLYGNGED-FDQIQRAAKKLKLVVRVYPG--RDHADPIFHDYK 347 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~--~~ll~a~~~l~~~~~~~~l~ivG~g~~-~~~l~~~~~~l~l~~~~~~~--~~~~~~l~~~ad 347 (562)
..+++..|.-.+.|.+ +...+.+..+.++ +.++++.|++++ .+..++..+..+. ..+.+. ..+...+++.||
T Consensus 180 ~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~e~~~~~~i~~~~~~-~~l~g~~sL~el~ali~~a~ 256 (319)
T TIGR02193 180 PYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDAEKQRAERIAEALPG-AVVLPKMSLAEVAALLAGAD 256 (319)
T ss_pred CEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHHHHHHHHHHHhhCCC-CeecCCCCHHHHHHHHHcCC
Confidence 4456677755566765 4667777777544 678888754544 3445555444432 233332 233348888999
Q ss_pred EEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-c-cccccCCc-eEee-----C-CHHHHHHHHHHHH
Q 008544 348 VFLNPSTTDVVCTATAEALAMGKIVVCANHPS-N-DFFKQFPN-CRTY-----D-GRNGFVEATLKAL 406 (562)
Q Consensus 348 v~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~-e~v~~~~~-g~~~-----~-d~~~la~~i~~ll 406 (562)
++|..- +. .+-=|.|+|+|+|+--.+. + .+-.-+.+ ..+. + ++++..+++.+++
T Consensus 257 l~I~~D---Sg--p~HlAaa~g~P~i~lfg~t~p~~~~P~~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 257 AVVGVD---TG--LTHLAAALDKPTVTLYGATDPGRTGGYGKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred EEEeCC---Ch--HHHHHHHcCCCEEEEECCCCHhhcccCCCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 999764 22 3444678899999874433 2 11111111 1121 1 7777877777653
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=87.78 E-value=14 Score=40.02 Aligned_cols=75 Identities=13% Similarity=-0.001 Sum_probs=48.7
Q ss_pred CCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----cccccc-CCceEe----------e--CCH
Q 008544 334 PGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQ-FPNCRT----------Y--DGR 395 (562)
Q Consensus 334 ~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~-~~~g~~----------~--~d~ 395 (562)
.+..+..+++..+++-.+-+. +--++++||+++|+|+|+-..-+ ...+.+ -..|+- . -+.
T Consensus 350 ~~w~PQ~~iL~h~~v~~fvtH--~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 427 (482)
T PLN03007 350 RGWAPQVLILDHQATGGFVTH--CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISR 427 (482)
T ss_pred ecCCCHHHHhccCccceeeec--CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccH
Confidence 345566789998876333332 33568999999999999986643 222111 012211 1 178
Q ss_pred HHHHHHHHHHHhCCC
Q 008544 396 NGFVEATLKALAEEP 410 (562)
Q Consensus 396 ~~la~~i~~ll~~~~ 410 (562)
+++.+++++++.+++
T Consensus 428 ~~l~~av~~~m~~~~ 442 (482)
T PLN03007 428 EKVEKAVREVIVGEE 442 (482)
T ss_pred HHHHHHHHHHhcCcH
Confidence 899999999998753
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=87.53 E-value=7.2 Score=41.75 Aligned_cols=132 Identities=7% Similarity=-0.024 Sum_probs=76.0
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEe---CCC----CHHHHHHHHHhcCCeeEEeCCCCChHHHHhh
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYG---NGE----DFDQIQRAAKKLKLVVRVYPGRDHADPIFHD 345 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG---~g~----~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~ 345 (562)
..+.+..|.+.. -..+.+.+.+..|....-++-.++-- .+. ..+.+++.++..| .+..+.....+++..
T Consensus 253 sVvyvsfGS~~~-~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g---~vv~~w~PQ~~vL~h 328 (446)
T PLN00414 253 SVVFCAFGTQFF-FEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRG---IVWEGWVEQPLILSH 328 (446)
T ss_pred ceEEEeeccccc-CCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCC---eEEeccCCHHHHhcC
Confidence 444456666542 23345555555554443333333322 111 1234444444333 234456677789988
Q ss_pred cCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccc-cCCceEee-------CCHHHHHHHHHHHHhCCC
Q 008544 346 YKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFK-QFPNCRTY-------DGRNGFVEATLKALAEEP 410 (562)
Q Consensus 346 adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~-~~~~g~~~-------~d~~~la~~i~~ll~~~~ 410 (562)
..+..+-+. +--++++||+++|+|+|+-...+ ...+. .-..|..+ -+.+++.+++++++.++.
T Consensus 329 ~~v~~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~ 404 (446)
T PLN00414 329 PSVGCFVNH--CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDS 404 (446)
T ss_pred CccceEEec--CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCCh
Confidence 754333232 34578999999999999986643 33442 33555544 278899999999998653
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=87.45 E-value=12 Score=40.10 Aligned_cols=131 Identities=11% Similarity=0.042 Sum_probs=75.6
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHH-HHhcCCcEEEEEeC-C--CC----HHHHHHHHHhcCCeeEEeCCCCChHHHHh
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIY-HKELAGLEMDLYGN-G--ED----FDQIQRAAKKLKLVVRVYPGRDHADPIFH 344 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l-~~~~~~~~l~ivG~-g--~~----~~~l~~~~~~l~l~~~~~~~~~~~~~l~~ 344 (562)
..+.+..|.+.. -..+.+.+.+..+ ....| +.+++--. + +. .+.+++.++..|+ +..+.....++++
T Consensus 252 sVvyvSfGS~~~-l~~~q~~e~~~~l~~s~~p-f~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~---~v~~W~PQ~~iL~ 326 (442)
T PLN02208 252 SVVFCSLGSQII-LEKDQFQELCLGMELTGLP-FLIAVKPPRGSSTVQEGLPEGFEERVKGRGV---VWGGWVQQPLILD 326 (442)
T ss_pred cEEEEecccccc-CCHHHHHHHHHHHHhCCCc-EEEEEeCCCcccchhhhCCHHHHHHHhcCCc---EeeccCCHHHHhc
Confidence 445556666542 2445566665554 33333 44444311 1 11 2333344332232 2345566678898
Q ss_pred hcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----cccccc-CCceEeeC-------CHHHHHHHHHHHHhCCC
Q 008544 345 DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQ-FPNCRTYD-------GRNGFVEATLKALAEEP 410 (562)
Q Consensus 345 ~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~-~~~g~~~~-------d~~~la~~i~~ll~~~~ 410 (562)
..++..+-|. +--++++||+++|+|+|+-..-+ ...+.+ -..|..++ +.+++.++|.++++++.
T Consensus 327 H~~v~~FvtH--cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~ 403 (442)
T PLN02208 327 HPSIGCFVNH--CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDS 403 (442)
T ss_pred CCccCeEEcc--CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCc
Confidence 8876555443 34568999999999999986643 222233 34455441 67899999999998763
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=87.32 E-value=1.5 Score=49.35 Aligned_cols=131 Identities=16% Similarity=0.087 Sum_probs=86.9
Q ss_pred CCCccEEEEEeeccccCCHHH-HHHHHHHHHH--hcCC-----cEEEEEeCCC-C---HHHH----HHHHHhcC------
Q 008544 270 KAFTKGAYYIGRMVWSKGYEE-LLGLLNIYHK--ELAG-----LEMDLYGNGE-D---FDQI----QRAAKKLK------ 327 (562)
Q Consensus 270 ~~~~~~il~vGr~~~~Kg~~~-ll~a~~~l~~--~~~~-----~~l~ivG~g~-~---~~~l----~~~~~~l~------ 327 (562)
.++...++++-|+..+|...+ ++..+..+.+ +.|+ .++++.|.-. . .+.+ .+.++..+
T Consensus 526 dp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~ 605 (798)
T PRK14985 526 NPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVG 605 (798)
T ss_pred CchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhC
Confidence 455566677789999999887 6655444432 2333 6777777621 1 1222 22332221
Q ss_pred --CeeEEeCCCC--ChHHHHhhcCEEEEccC--CCCCcHHHHHHHHcCCcEEeeCCCC-cccccc--CCceEeeC-CHHH
Q 008544 328 --LVVRVYPGRD--HADPIFHDYKVFLNPST--TDVVCTATAEALAMGKIVVCANHPS-NDFFKQ--FPNCRTYD-GRNG 397 (562)
Q Consensus 328 --l~~~~~~~~~--~~~~l~~~adv~v~pS~--~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~--~~~g~~~~-d~~~ 397 (562)
+++.|+..++ -.+.++..+|+-...|+ .|..|+.=+=+|.-|.+.+.|--|. .|+.++ +.|+|++. +.++
T Consensus 606 ~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG~~~~e 685 (798)
T PRK14985 606 DKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTVEQ 685 (798)
T ss_pred CceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeCCCHHH
Confidence 1344555533 33488899999999886 8999999999999999999997765 666654 78999985 5555
Q ss_pred HHH
Q 008544 398 FVE 400 (562)
Q Consensus 398 la~ 400 (562)
+.+
T Consensus 686 v~~ 688 (798)
T PRK14985 686 VKA 688 (798)
T ss_pred HHH
Confidence 543
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=86.04 E-value=1.7 Score=48.97 Aligned_cols=131 Identities=11% Similarity=0.022 Sum_probs=87.8
Q ss_pred CCCccEEEEEeeccccCCHHH-HHHHHH---HHHHhcC-----CcEEEEEeCCC---C-HHHHHHHHHhcC---------
Q 008544 270 KAFTKGAYYIGRMVWSKGYEE-LLGLLN---IYHKELA-----GLEMDLYGNGE---D-FDQIQRAAKKLK--------- 327 (562)
Q Consensus 270 ~~~~~~il~vGr~~~~Kg~~~-ll~a~~---~l~~~~~-----~~~l~ivG~g~---~-~~~l~~~~~~l~--------- 327 (562)
.++....+++-|+..+|...+ ++..+. +++. .| ..++++.|.-. . .+.+-+++....
T Consensus 524 dp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~-~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v 602 (794)
T TIGR02093 524 DPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKE-DPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAV 602 (794)
T ss_pred CccccchhhheechhhhHHHHHHhhhHHHHHHHHh-CCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhh
Confidence 455666778889999999887 555544 4433 23 35777777621 1 122222222211
Q ss_pred ---CeeEEeCCCC--ChHHHHhhcCEEEEccC--CCCCcHHHHHHHHcCCcEEeeCCCC-cccccc--CCceEeeC-CHH
Q 008544 328 ---LVVRVYPGRD--HADPIFHDYKVFLNPST--TDVVCTATAEALAMGKIVVCANHPS-NDFFKQ--FPNCRTYD-GRN 396 (562)
Q Consensus 328 ---l~~~~~~~~~--~~~~l~~~adv~v~pS~--~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~--~~~g~~~~-d~~ 396 (562)
+++.|+..++ -.+.++..+|+-...|+ .|..|+.-+=+|.-|.+.+.|--|. .|+.++ +.|+|++. +.+
T Consensus 603 ~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ 682 (794)
T TIGR02093 603 GDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVE 682 (794)
T ss_pred CCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcCCCHH
Confidence 1344555533 33488899999999886 8999999999999999999997765 666665 78999986 666
Q ss_pred HHHHH
Q 008544 397 GFVEA 401 (562)
Q Consensus 397 ~la~~ 401 (562)
+..+.
T Consensus 683 ev~~~ 687 (794)
T TIGR02093 683 EVEAL 687 (794)
T ss_pred HHHHH
Confidence 65543
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=85.88 E-value=19 Score=38.60 Aligned_cols=132 Identities=11% Similarity=-0.010 Sum_probs=73.6
Q ss_pred CccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEe-CCC-C-----HHHHHHHHHhcCCeeEEeCCCCChHHHHh
Q 008544 272 FTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYG-NGE-D-----FDQIQRAAKKLKLVVRVYPGRDHADPIFH 344 (562)
Q Consensus 272 ~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG-~g~-~-----~~~l~~~~~~l~l~~~~~~~~~~~~~l~~ 344 (562)
...+.+..|.+.. -..+.+.+.+..|....-.+.+++-- .+. + .+.+++..+..| .+..+..+..++++
T Consensus 257 ~sVvyvsfGS~~~-~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG---~v~~~W~PQ~~vL~ 332 (453)
T PLN02764 257 DSVVFCALGSQVI-LEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRG---VVWGGWVQQPLILS 332 (453)
T ss_pred CceEEEeeccccc-CCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCC---cEEeCCCCHHHHhc
Confidence 3445556676532 23345555555544443345444431 111 1 122222222222 12335666778888
Q ss_pred hcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----cccccc-CCceEee-------CCHHHHHHHHHHHHhCC
Q 008544 345 DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQ-FPNCRTY-------DGRNGFVEATLKALAEE 409 (562)
Q Consensus 345 ~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~-~~~g~~~-------~d~~~la~~i~~ll~~~ 409 (562)
...+..+-+. +--++++||+++|+|+|+-...+ ...+.+ -..|+.. -+.+++.++++++++++
T Consensus 333 h~~v~~FvtH--~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~ 408 (453)
T PLN02764 333 HPSVGCFVSH--CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRD 408 (453)
T ss_pred CcccCeEEec--CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCC
Confidence 7655333332 44678999999999999987653 344433 2344432 17789999999999875
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=85.79 E-value=12 Score=40.32 Aligned_cols=130 Identities=11% Similarity=0.005 Sum_probs=72.9
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEE-EeCC---CCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCE
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDL-YGNG---EDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKV 348 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i-vG~g---~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv 348 (562)
..+.+..|.+... ..+.+-+.+..+... +.+|++ ++.. .+.+.+++.... + +..+ .+..+..++++.+++
T Consensus 270 svvyvsfGS~~~~-~~~~~~e~a~~l~~~--~~~flw~~~~~~~~~~~~~~~~~~~~-~-~g~v-~~w~PQ~~iL~h~~v 343 (456)
T PLN02210 270 SVVYISFGSMLES-LENQVETIAKALKNR--GVPFLWVIRPKEKAQNVQVLQEMVKE-G-QGVV-LEWSPQEKILSHMAI 343 (456)
T ss_pred ceEEEEecccccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCccccchhhHHhhccC-C-CeEE-EecCCHHHHhcCcCc
Confidence 3455566775432 334444444444433 344444 3421 122333333211 1 1222 356667789998884
Q ss_pred EEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----cccccc-CCceEee--------CCHHHHHHHHHHHHhCCC
Q 008544 349 FLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQ-FPNCRTY--------DGRNGFVEATLKALAEEP 410 (562)
Q Consensus 349 ~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~-~~~g~~~--------~d~~~la~~i~~ll~~~~ 410 (562)
..+-+. +--++++||+++|+|+|+-...+ ...+.+ -..|..+ -+.+++.+++++++.++.
T Consensus 344 g~FitH--~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~ 417 (456)
T PLN02210 344 SCFVTH--CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPA 417 (456)
T ss_pred CeEEee--CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCch
Confidence 333332 22358999999999999987654 333433 3455443 177899999999997654
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=85.79 E-value=7.6 Score=41.97 Aligned_cols=79 Identities=19% Similarity=0.204 Sum_probs=50.8
Q ss_pred CCCChHHHHhh--cCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccC-CceEee------C---CHHH
Q 008544 335 GRDHADPIFHD--YKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQF-PNCRTY------D---GRNG 397 (562)
Q Consensus 335 ~~~~~~~l~~~--adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~-~~g~~~------~---d~~~ 397 (562)
+..+..++++. +.+||.- +--.+++||+.+|+|+|+-..-+ ...+.+. ..|+.. . +.++
T Consensus 343 ~W~PQ~~iL~H~~v~~FvtH----~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~ 418 (480)
T PLN02555 343 QWCPQEKVLAHPSVACFVTH----CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREE 418 (480)
T ss_pred ecCCHHHHhCCCccCeEEec----CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHH
Confidence 34556678854 4555532 34568999999999999986643 3333333 455443 1 5789
Q ss_pred HHHHHHHHHhCCCC-CccHHH
Q 008544 398 FVEATLKALAEEPA-QPTDAQ 417 (562)
Q Consensus 398 la~~i~~ll~~~~~-~l~~~a 417 (562)
+.++|.+++.+++. .|++++
T Consensus 419 v~~~v~~vm~~~~g~~~r~ra 439 (480)
T PLN02555 419 VAECLLEATVGEKAAELKQNA 439 (480)
T ss_pred HHHHHHHHhcCchHHHHHHHH
Confidence 99999999976532 444433
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=85.79 E-value=13 Score=39.78 Aligned_cols=80 Identities=11% Similarity=0.045 Sum_probs=52.4
Q ss_pred CCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccC-CceEee-------CCHHHHHHH
Q 008544 335 GRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQF-PNCRTY-------DGRNGFVEA 401 (562)
Q Consensus 335 ~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~-~~g~~~-------~d~~~la~~ 401 (562)
+..+..++++..++-.+-+. +--++++||+.+|+|+|+-...+ ...+.+. ..|+-. -+.+++.++
T Consensus 333 ~W~PQ~~iL~h~~vg~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~a 410 (455)
T PLN02152 333 SWCSQIEVLRHRAVGCFVTH--CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIRRC 410 (455)
T ss_pred eeCCHHHHhCCcccceEEee--CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcHHHHHHH
Confidence 45566789998886554443 33568999999999999986643 2333331 233332 167899999
Q ss_pred HHHHHhCCCCCccHH
Q 008544 402 TLKALAEEPAQPTDA 416 (562)
Q Consensus 402 i~~ll~~~~~~l~~~ 416 (562)
+.++++++...++++
T Consensus 411 v~~vm~~~~~~~r~~ 425 (455)
T PLN02152 411 LEAVMEEKSVELRES 425 (455)
T ss_pred HHHHHhhhHHHHHHH
Confidence 999997554344433
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=84.62 E-value=9.7 Score=38.20 Aligned_cols=142 Identities=15% Similarity=0.058 Sum_probs=74.9
Q ss_pred ccEEEEcChhhhccCCCcccccc-ccCCCCcCcchhhhHHhhcCCCCCccEEEEEeecc---ccCCHHHHHHHHHHHHHh
Q 008544 226 CHKVIRLSAATQEYPNSIVCNVH-GVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMV---WSKGYEELLGLLNIYHKE 301 (562)
Q Consensus 226 ad~vi~~S~~~~~~~~~~~~~v~-GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~---~~Kg~~~ll~a~~~l~~~ 301 (562)
+|.+.+--+...++.++...++. +-|+.+.-+.... + .......+.|++.-+-. ..+..+.+.+++..+.++
T Consensus 128 ~~~i~vRD~~S~~~l~~~g~~i~~~~D~a~~l~~~~~--~--~~~~~~~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~ 203 (298)
T TIGR03609 128 CRAISVRDAASYRLLKRLGIPAELAADPVWLLPPEPW--P--GGEPLPEPVIVVSLRPWPLLDVSRLLRLLRALDRLQRD 203 (298)
T ss_pred CCEEEEeCHHHHHHHHHhCCCceEeCChhhhCCCCcc--c--ccccCCCCeEEEEECCCCcCCHHHHHHHHHHHHHHHHh
Confidence 68887766666665443222232 3455443221110 0 01111234444433321 112355677777777655
Q ss_pred cCCcEEEEEeC--CCCHHHHHHHHHhcCCeeEEeCC--CCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCC
Q 008544 302 LAGLEMDLYGN--GEDFDQIQRAAKKLKLVVRVYPG--RDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANH 377 (562)
Q Consensus 302 ~~~~~l~ivG~--g~~~~~l~~~~~~l~l~~~~~~~--~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~ 377 (562)
. +.+++++.. ..|.+..++..+.+.....++.. ..+..++++++|++|-...+ .++=|+.+|+|+|+-..
T Consensus 204 ~-g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~~vI~~RlH-----~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 204 T-GAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASARLVIGMRLH-----ALILAAAAGVPFVALSY 277 (298)
T ss_pred h-CCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCCEEEEechH-----HHHHHHHcCCCEEEeec
Confidence 3 566655553 23445455555554333333322 22333778899988877655 67889999999998754
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=83.62 E-value=16 Score=39.41 Aligned_cols=71 Identities=14% Similarity=0.076 Sum_probs=48.0
Q ss_pred CCCChHHHHhhcC--EEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC----cc--ccccCCceEee-----------CCH
Q 008544 335 GRDHADPIFHDYK--VFLNPSTTDVVCTATAEALAMGKIVVCANHPS----ND--FFKQFPNCRTY-----------DGR 395 (562)
Q Consensus 335 ~~~~~~~l~~~ad--v~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~----~e--~v~~~~~g~~~-----------~d~ 395 (562)
+..+..++++... .||.- +--++++||+++|+|+|+-...+ +. .++.-..|..+ -+.
T Consensus 346 ~w~PQ~~iL~h~~vg~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~ 421 (475)
T PLN02167 346 GWAPQVEILAHKAIGGFVSH----CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKA 421 (475)
T ss_pred ccCCHHHHhcCcccCeEEee----CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccH
Confidence 5566778888755 55532 33458999999999999986643 22 23333445433 167
Q ss_pred HHHHHHHHHHHhCC
Q 008544 396 NGFVEATLKALAEE 409 (562)
Q Consensus 396 ~~la~~i~~ll~~~ 409 (562)
++++++|.+++.++
T Consensus 422 ~~l~~av~~~m~~~ 435 (475)
T PLN02167 422 DEIAGAVRSLMDGE 435 (475)
T ss_pred HHHHHHHHHHhcCC
Confidence 89999999999764
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=82.09 E-value=18 Score=39.12 Aligned_cols=69 Identities=9% Similarity=0.025 Sum_probs=46.2
Q ss_pred CCCChHHHHhhcC--EEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC----cc--ccccCCceEee--------------
Q 008544 335 GRDHADPIFHDYK--VFLNPSTTDVVCTATAEALAMGKIVVCANHPS----ND--FFKQFPNCRTY-------------- 392 (562)
Q Consensus 335 ~~~~~~~l~~~ad--v~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~----~e--~v~~~~~g~~~-------------- 392 (562)
+..+..++++... +|| +. +--.+++||+.+|+|+|+-...+ +. .++.-..|..+
T Consensus 348 ~W~PQ~~iL~H~~v~~Fv--tH--~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~ 423 (481)
T PLN02554 348 GWAPQVAVLAKPAIGGFV--TH--CGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEME 423 (481)
T ss_pred eeCCHHHHhCCcccCccc--cc--CccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccC
Confidence 4556677885444 455 22 33568999999999999986643 22 23333444432
Q ss_pred C-CHHHHHHHHHHHHh
Q 008544 393 D-GRNGFVEATLKALA 407 (562)
Q Consensus 393 ~-d~~~la~~i~~ll~ 407 (562)
. +.+++.++|++++.
T Consensus 424 ~~~~e~l~~av~~vm~ 439 (481)
T PLN02554 424 TVTAEEIERGIRCLME 439 (481)
T ss_pred eEcHHHHHHHHHHHhc
Confidence 1 77899999999996
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=82.08 E-value=29 Score=37.56 Aligned_cols=70 Identities=10% Similarity=0.142 Sum_probs=46.3
Q ss_pred CCCCChHHHHhh--cCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccc-cCCceEee-------CCHHHH
Q 008544 334 PGRDHADPIFHD--YKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFK-QFPNCRTY-------DGRNGF 398 (562)
Q Consensus 334 ~~~~~~~~l~~~--adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~-~~~~g~~~-------~d~~~l 398 (562)
.+..+..+++.. .++||.- +--.+++||+++|+|+|+-...+ ...+. .-..|... -+.+++
T Consensus 348 ~~w~PQ~~vL~h~~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v 423 (477)
T PLN02863 348 RGWAPQVAILSHRAVGAFLTH----CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDEL 423 (477)
T ss_pred cCCCCHHHHhcCCCcCeEEec----CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHHH
Confidence 345556778886 4566632 34568999999999999986643 23332 22445433 167889
Q ss_pred HHHHHHHHh
Q 008544 399 VEATLKALA 407 (562)
Q Consensus 399 a~~i~~ll~ 407 (562)
.+++.+++.
T Consensus 424 ~~~v~~~m~ 432 (477)
T PLN02863 424 ARVFMESVS 432 (477)
T ss_pred HHHHHHHhh
Confidence 999998884
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=81.19 E-value=31 Score=37.20 Aligned_cols=72 Identities=14% Similarity=-0.027 Sum_probs=47.6
Q ss_pred CCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----cccccc-CCceEee-----------CCHHH
Q 008544 335 GRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQ-FPNCRTY-----------DGRNG 397 (562)
Q Consensus 335 ~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~-~~~g~~~-----------~d~~~ 397 (562)
+..+..++++...+..+-|. +--++++||+++|+|+|+-...+ ...+.+ -..|+-+ -+.++
T Consensus 338 ~W~PQ~~IL~H~~vg~FvTH--~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~ 415 (468)
T PLN02207 338 GWSPQVEILAHKAVGGFVSH--CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANE 415 (468)
T ss_pred EeCCHHHHhcccccceeeec--CccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHH
Confidence 45666778887766433333 23457899999999999986654 232222 3444411 17789
Q ss_pred HHHHHHHHHhC
Q 008544 398 FVEATLKALAE 408 (562)
Q Consensus 398 la~~i~~ll~~ 408 (562)
+.++|++++.+
T Consensus 416 i~~av~~vm~~ 426 (468)
T PLN02207 416 IETAIRCVMNK 426 (468)
T ss_pred HHHHHHHHHhc
Confidence 99999999963
|
|
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=81.01 E-value=29 Score=35.23 Aligned_cols=95 Identities=16% Similarity=0.233 Sum_probs=55.2
Q ss_pred EEEeeccccCCH--HHHHHHHHHHHHhcCCcEEEEE-eCCCCHHHHHHHHHhcCCeeEEeCC--CCChHHHHhhcCEEEE
Q 008544 277 YYIGRMVWSKGY--EELLGLLNIYHKELAGLEMDLY-GNGEDFDQIQRAAKKLKLVVRVYPG--RDHADPIFHDYKVFLN 351 (562)
Q Consensus 277 l~vGr~~~~Kg~--~~ll~a~~~l~~~~~~~~l~iv-G~g~~~~~l~~~~~~l~l~~~~~~~--~~~~~~l~~~adv~v~ 351 (562)
+..|.-.+.|.+ +...+.+..+.++ +.++++. |...+.+..++..+... .+.+.+. ..+...+++.||++|.
T Consensus 183 ~~~~~s~~~k~Wp~e~~a~li~~l~~~--~~~ivl~~G~~~e~~~~~~i~~~~~-~~~l~g~~sL~elaali~~a~l~I~ 259 (322)
T PRK10964 183 FLHATTRDDKHWPEAHWRELIGLLAPS--GLRIKLPWGAEHEEQRAKRLAEGFP-YVEVLPKLSLEQVARVLAGAKAVVS 259 (322)
T ss_pred EEeCCCcccccCCHHHHHHHHHHHHHC--CCeEEEeCCCHHHHHHHHHHHccCC-cceecCCCCHHHHHHHHHhCCEEEe
Confidence 344443345544 3666777666543 6778776 54334444444443322 2333332 2233388889999997
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEeeCCCC
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCANHPS 379 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t~~~~ 379 (562)
... .++-=|.|+|+|+|+-=.+.
T Consensus 260 nDS-----Gp~HlA~A~g~p~valfGpt 282 (322)
T PRK10964 260 VDT-----GLSHLTAALDRPNITLYGPT 282 (322)
T ss_pred cCC-----cHHHHHHHhCCCEEEEECCC
Confidence 642 24555788999999985543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 562 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 1e-09 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 1e-07 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 4e-06 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 8e-05 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 8e-05 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 6e-04 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 8e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 69.1 bits (168), Expect = 2e-12
Identities = 78/449 (17%), Positives = 140/449 (31%), Gaps = 146/449 (32%)
Query: 139 KFAADKKSILAVGDITE----IIPDEEADIAVLEEPE------HLTWFHHGKRWKAKFRF 188
F + D+ + I+ EE D ++ + L W K+ + +F
Sbjct: 28 AFVDN----FDCKDVQDMPKSILSKEEIDH-IIMSKDAVSGTLRLFWTLLSKQEEMVQKF 82
Query: 189 VVGIVHTNY---LEYVKREKN-------------DRL----QAFLLEFVNSWLARVHCHK 228
V ++ NY + +K E+ DRL Q F V+ R+ +
Sbjct: 83 VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS----RLQPYL 138
Query: 229 VIRLSAATQEYPNSIVCNVHG------------------VNPKF------LEIGEKK--- 261
+R A + P V + G V K L +
Sbjct: 139 KLR-QALLELRPAKNVL-IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPE 196
Query: 262 --MEQQQN----GNKAFTKGA--------------YYIGRMVWSKGYEE-LLGLLNIYHK 300
+E Q + +T + + R++ SK YE LL LLN+ +
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA 256
Query: 301 ELAGLEMDLYGNGEDFD---QI------QRAAKKLKLVVRVYPGRDHADPIFHDYKV--- 348
+ F+ +I ++ L + DH +V
Sbjct: 257 KAW----------NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306
Query: 349 ---FLNPSTTDV---VCTATAEALAM-GKIVVCANHPS-NDFFKQFPNCRTYDGRNGFVE 400
+L+ D+ V T L++ + + + + D +K D +E
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSIIAESI--RDGLATWDNWKHV----NCDKLTTIIE 360
Query: 401 ATLKALAEEPAQ-----------PTDA----QTHQLSWESATERFLQ--VAELVGD-VVT 442
++L L EPA+ P A L W + + V +L +V
Sbjct: 361 SSLNVL--EPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE 418
Query: 443 KRSKSPSRHLESESLNSKRIIEDAFGYLH 471
K+ K + + S L K +E+ + LH
Sbjct: 419 KQPKESTISIPSIYLELKVKLENEY-ALH 446
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 2e-04
Identities = 43/251 (17%), Positives = 71/251 (28%), Gaps = 81/251 (32%)
Query: 40 EILSLMDRKQ--QHIAIF--------TTASLPWLTGTA------VNPLFRAAYLAKDGER 83
+L + ++ +++F SL W VN L + + + K +
Sbjct: 364 NVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423
Query: 84 RVTLVIPWLSL-----------IHQKQV--YPGNITF----ASPKEQEAYVRWWL----- 121
T+ IP + L +H+ V Y TF P + Y +
Sbjct: 424 S-TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLK 482
Query: 122 -----EDRTGFTSTF-DTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTW 175
E T F F D RF K D + A G I +
Sbjct: 483 NIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQ---------------- 526
Query: 176 FHHGKRWKAKFRFVVGIVHTNYLEYVKR--EKNDRLQAFLLEFVNSWLARVHCHKVIRLS 233
+F Y Y+ K +RL +L+F+ + C K L
Sbjct: 527 ----------LKF--------YKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLL 568
Query: 234 AATQEYPNSIV 244
+ +
Sbjct: 569 RIALMAEDEAI 579
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 1e-09
Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 17/137 (12%)
Query: 278 YIGRMVWSKGYEELL---GLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRV-Y 333
+GR K L+ L K + + L G G D +I+ A+KL + +
Sbjct: 7 MVGRYSNEKNQSVLIKAVALS----KYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEFGF 62
Query: 334 PGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHP--SNDFFKQFPNCRT 391
+ I ++++ + + A EA+++G + V AN P + F
Sbjct: 63 VNSNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFAL------ 116
Query: 392 YDGRNGFVEATLKALAE 408
D R+ F K L+
Sbjct: 117 -DERSLFEPNNAKDLSA 132
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 40/238 (16%), Positives = 79/238 (33%), Gaps = 15/238 (6%)
Query: 147 ILAVGDITEIIPDEEADIAVLEEPEHL-TWFHHG-KRWKAKFRFVVGI--VHTNYLEYVK 202
+ + E+ E DI H+ H + AK I V T + +
Sbjct: 85 LALASKMAEVAQRENLDIL------HVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT 138
Query: 203 REKNDRLQAFLLEFVNSWLARVHC--HKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEK 260
+D L+ F V H +I + + I + ++ + +
Sbjct: 139 VLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDM 198
Query: 261 KMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQ 320
+++ G K +I K ++++ E+ ++ L G+G +F I
Sbjct: 199 TQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVTEV-DAKLLLVGDGPEFCTIL 257
Query: 321 RAAKKLKLVVRVY-PG-RDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCAN 376
+ K L + RV G +D+ + + L S + EA+A G +
Sbjct: 258 QLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTR 315
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Length = 406 | Back alignment and structure |
|---|
Score = 48.2 bits (114), Expect = 4e-06
Identities = 58/406 (14%), Positives = 111/406 (27%), Gaps = 67/406 (16%)
Query: 48 KQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERR-VTLVIPWLSLIHQKQVYPG--- 103
++ + ++ + T N F LA G R +L LS + P
Sbjct: 13 RRPCYLVLSSHD--FRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMKGDMRLPLDDT 70
Query: 104 NITFASPKEQEAYVRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEAD 163
T S + Y+ ++ F + + + E+D
Sbjct: 71 ANTVVSHNGVDCYLWRTTVHPFNTRRSWLRPVEDAMFRWYAAHPPKQ--LLDWMR--ESD 126
Query: 164 IAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAF-----LLEFVN 218
+ V E + + KR + V Y +D L + +
Sbjct: 127 VIVFESGIAVAFIELAKRVNPAAKLV-------Y--RA----SDGLSTINVASYIEREFD 173
Query: 219 SWLARVHCHKVIRLSAATQEY---PNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKG 275
+ + +S A +++ HGV+ ++G+ +
Sbjct: 174 RVAPTLDV--IALVSPAMAAEVVSRDNVFHVGHGVDHNLDQLGDPSPYAEG-------IH 224
Query: 276 AYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPG 335
A +G M++ + K + + G+G V VY
Sbjct: 225 AVAVGSMLFD------PEFFVVASKAFPQVTFHVIGSGMGRHPGYGDN------VIVYGE 272
Query: 336 RDHAD--PIFHDYKVFLNP----STTDVVCTA---TAEALAMGKIVVCANHPSNDFFKQF 386
HA + + P + + + G VC N + +F
Sbjct: 273 MKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNAVVGPYKSRF 332
Query: 387 PNCRTYDGRNGFVEATLKALAEEPAQPTDAQTHQLSWESATERFLQ 432
T + + A +AL P L+W T+R L
Sbjct: 333 --GYTPGNADSVIAAITQALEA----PRVRYRQCLNWSDTTDRVLD 372
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 8e-05
Identities = 26/245 (10%), Positives = 66/245 (26%), Gaps = 26/245 (10%)
Query: 153 ITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAF 212
++E I + DI ++ + + K R + + + ++ +
Sbjct: 73 LSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIRENL------W 126
Query: 213 LLEFVNSWLARVHCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAF 272
+ + + K I H V+ K + K + + +
Sbjct: 127 WIFSHPKVVGVMAMSKCWISDICNYGCKVPINIVSHFVDTKTIYDARKLVGLSEYNDDVL 186
Query: 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGED---FDQIQRAAKKLKLV 329
+ R K + + + + ++ N FD A ++L
Sbjct: 187 F---LNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVAS 243
Query: 330 VRVYPGRDHADPIFHDYK--------------VFLNPSTTDVVCTATAEALAMGKIVVCA 375
+ + V +N S+ + +AE +GK ++ +
Sbjct: 244 GVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIIS 303
Query: 376 NHPSN 380
Sbjct: 304 AVGGA 308
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 8e-05
Identities = 33/229 (14%), Positives = 64/229 (27%), Gaps = 30/229 (13%)
Query: 172 HLTWFHHGK-----RWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHC 226
WF AK ++ + + V + L +
Sbjct: 88 DNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWSMLPGSRQSLR-----KIGT-EV 141
Query: 227 HKVIRLSAATQEY-------PNSIVCNVHGVNPKF---LEIGEKKMEQQQNGNKAFTKGA 276
+ +S T + GV+ K +K +++ G T
Sbjct: 142 DVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVI 201
Query: 277 YYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGR 336
R+V KG + L+ + ++ + G+G ++R A + V+
Sbjct: 202 ACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRL 261
Query: 337 DHAD--PIFHDYKVFLNPSTTDVVCT-------ATAEALAMGKIVVCAN 376
++ D +F P+ T EA A G V+
Sbjct: 262 EYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGT 310
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 6e-04
Identities = 19/176 (10%), Positives = 38/176 (21%), Gaps = 31/176 (17%)
Query: 278 YIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRD 337
++GR+ KG E G + L G + + ++ V
Sbjct: 167 FMGRVSPHKGALEAAAFA-----HACGRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVG 221
Query: 338 HAD--PIFHDYKVFLNPSTTDVVCTAT----------AEALAMGKIVVCANHPSNDFFKQ 385
+ L S +EA G VV +
Sbjct: 222 GERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGC------ 275
Query: 386 FP-----NCRTYDGRNGFVEATLKALAEEPAQPTDAQTHQL---SWESATERFLQV 433
F + + + + + ER+++
Sbjct: 276 LAEIVPSVGEVVGYGTDFAPDEARRTLAGLPASDEVRRAAVRLWGHVTIAERYVEQ 331
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 8e-04
Identities = 26/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 210 QAFLLEFVNSWLARVHCHKVIRLSAATQEY---------PNSIVCNVHGVNPKFLEIGEK 260
EF+ ++ + + + L Q P SI + L+ E
Sbjct: 162 NREFWEFLRRFVEK-YDRYIFHLPEYVQPELDRNKAVIMPPSI--DPLSEKNVELKQTEI 218
Query: 261 KMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFD--- 317
++ + R KG +++ + +++ G+++ L G D
Sbjct: 219 LRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEG 278
Query: 318 ------QIQRAAKKLKLVVRVY-PGRDHAD--PIFHDYKVFLNPSTTDVVCTATAEALAM 368
+++ + + V G + V L S + EA+
Sbjct: 279 WIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWK 338
Query: 369 GKIVVCANH 377
GK V+
Sbjct: 339 GKPVIGRAV 347
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 562 | |||
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.96 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.95 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.94 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.94 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.93 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.91 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.9 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.9 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.9 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.89 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.88 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.86 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.86 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.84 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.79 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.73 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.72 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.69 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.69 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.66 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.64 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.63 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.55 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.5 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.48 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.47 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.32 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.31 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.21 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.17 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.14 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.97 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 98.77 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.75 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.75 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.73 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.72 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 98.37 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 98.17 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 98.07 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 97.47 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.37 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 96.91 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 96.08 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 96.07 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 95.93 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 95.21 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 95.16 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 91.46 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 91.21 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 83.82 |
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-37 Score=318.14 Aligned_cols=351 Identities=14% Similarity=0.077 Sum_probs=258.6
Q ss_pred CCeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCC
Q 008544 49 QQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFT 128 (562)
Q Consensus 49 ~~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (562)
+|||+++++.++|..+|.+..+..+++.| +| |+|+++++.... .. ...+ ......
T Consensus 4 ~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g-~~v~v~~~~~~~-----------------~~---~~~~--~~~~~~ 58 (394)
T 3okp_A 4 SRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DP-ESIVVFASTQNA-----------------EE---AHAY--DKTLDY 58 (394)
T ss_dssp CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CG-GGEEEEEECSSH-----------------HH---HHHH--HTTCSS
T ss_pred CceEEEEeCccCCccchHHHHHHHHHHHh--cC-CeEEEEECCCCc-----------------cc---hhhh--ccccce
Confidence 48999999999999999999999999999 55 999999983211 00 0000 000000
Q ss_pred CCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-C-EEEEEcCCcHHHHhhhhc
Q 008544 129 STFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-F-VVGIVHTNYLEYVKREKN 206 (562)
Q Consensus 129 ~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~-vi~~~h~~~~~~~~~~~~ 206 (562)
.-.++.. ............+.+++++.+||+||++.+....++ ..+.++.+ | +|.++|+....+...
T Consensus 59 ~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~---~~~~~~~~~~~~i~~~h~~~~~~~~~--- 127 (394)
T 3okp_A 59 EVIRWPR-----SVMLPTPTTAHAMAEIIREREIDNVWFGAAAPLALM---AGTAKQAGASKVIASTHGHEVGWSML--- 127 (394)
T ss_dssp EEEEESS-----SSCCSCHHHHHHHHHHHHHTTCSEEEESSCTTGGGG---HHHHHHTTCSEEEEECCSTHHHHTTS---
T ss_pred EEEEccc-----cccccchhhHHHHHHHHHhcCCCEEEECCcchHHHH---HHHHHhcCCCcEEEEeccchhhhhhc---
Confidence 0011110 000111123456788888999999999987766444 22344434 4 888999764432211
Q ss_pred hHHHHHHHHHHHHHHHHHhccEEEEcChhhhccC------CCcc-ccccccCCCCcCc-c--hhhhHHhhcCCCCCccEE
Q 008544 207 DRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYP------NSIV-CNVHGVNPKFLEI-G--EKKMEQQQNGNKAFTKGA 276 (562)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~------~~~~-~~v~GVd~~~~~~-~--~~~~~~~~~~~~~~~~~i 276 (562)
...+.+.+++.+. +|.++++|+..++.. ...+ +..+|+|.+.+.+ . .....+...+++++.+.+
T Consensus 128 -----~~~~~~~~~~~~~-~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 201 (394)
T 3okp_A 128 -----PGSRQSLRKIGTE-VDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVI 201 (394)
T ss_dssp -----HHHHHHHHHHHHH-CSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTCCEE
T ss_pred -----chhhHHHHHHHHh-CCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCceEE
Confidence 1222223333343 799999998887732 2233 3346999987765 2 223345567777777999
Q ss_pred EEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCC--CChHHHHhhcCEEEEccC
Q 008544 277 YYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGR--DHADPIFHDYKVFLNPST 354 (562)
Q Consensus 277 l~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~--~~~~~l~~~adv~v~pS~ 354 (562)
+|+|++.+.||++.+++++..+.++.|+++|+|+|+|++.+.+++.+..+..++.+++.. ++..++|+.+|++|+||.
T Consensus 202 ~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~ 281 (394)
T 3okp_A 202 ACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPAR 281 (394)
T ss_dssp EEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCC
T ss_pred EEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCc
Confidence 999999999999999999999999999999999999999999998885554567777776 566699999999999999
Q ss_pred C-------CCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH----
Q 008544 355 T-------DVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT---- 418 (562)
Q Consensus 355 ~-------E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar---- 418 (562)
. |++|++++|||+||+|||+++.++ .|++.++ +|++++ |+++++++|.++++|++. .|+++++
T Consensus 282 ~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 360 (394)
T 3okp_A 282 TRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVE 360 (394)
T ss_dssp CBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 8 999999999999999999999998 8999998 999986 999999999999998875 7777766
Q ss_pred hcCCHHHHHHHHHHHHHhcCcccc
Q 008544 419 HQLSWESATERFLQVAELVGDVVT 442 (562)
Q Consensus 419 ~~~sw~~~~~~~~~~y~~~~~~~~ 442 (562)
++|+|+.+++++.++|+.......
T Consensus 361 ~~~s~~~~~~~~~~~~~~~~r~~~ 384 (394)
T 3okp_A 361 AEWSWEIMGERLTNILQSEPRKLA 384 (394)
T ss_dssp HHTBHHHHHHHHHHHHHSCCC---
T ss_pred HhCCHHHHHHHHHHHHHHhccCcc
Confidence 579999999999999998774443
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=321.77 Aligned_cols=370 Identities=16% Similarity=0.154 Sum_probs=252.8
Q ss_pred cCCeEEEEecccCC-CcccccccHHHHHHHHHHcCCCeEEEEeecCCcccccc--------------c---cCCCceeCC
Q 008544 48 KQQHIAIFTTASLP-WLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQ--------------V---YPGNITFAS 109 (562)
Q Consensus 48 ~~~rI~ivt~~~~P-~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~--------------~---~p~~i~~~~ 109 (562)
++|||++++..++| ..||.+..+..++++|+++| |+|+++++......... . ..+++.+..
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G-~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~ 79 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLG-HEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYR 79 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTT-CEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEE
Confidence 36999999988888 78998999999999999998 99999998543221110 0 001111111
Q ss_pred chhhHHHHHHHhhhccCCCCCccccccc---cc-chhccchhhhHHh-HHhhc-CcCCCcEEEecCCchhhhhhchHHHH
Q 008544 110 PKEQEAYVRWWLEDRTGFTSTFDTRFYP---GK-FAADKKSILAVGD-ITEII-PDEEADIAVLEEPEHLTWFHHGKRWK 183 (562)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~i~~y~---~r-~~~~~~~~~~~~~-l~~~i-~~~~pDvV~~~~~~~~~~~~~~~~~~ 183 (562)
... .... +...|. .. ............. +.+.+ +..+|||||+|.+... +. +..++
T Consensus 80 ~~~-------------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~-~~--~~~~~ 141 (439)
T 3fro_A 80 IGG-------------GLLD--SEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTV-FA--GALIK 141 (439)
T ss_dssp EES-------------GGGG--CSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGH-HH--HHHHH
T ss_pred ecc-------------hhcc--ccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhh-hh--HHHHh
Confidence 000 0000 000000 00 0000000001112 22222 3679999999976543 22 22233
Q ss_pred hhcC-CEEEEEcCCcHHHHhhhh--chHHH---HHHHHHHHHHHHHHhccEEEEcChhhhcc-------CCCcc-ccccc
Q 008544 184 AKFR-FVVGIVHTNYLEYVKREK--NDRLQ---AFLLEFVNSWLARVHCHKVIRLSAATQEY-------PNSIV-CNVHG 249 (562)
Q Consensus 184 ~~~~-~vi~~~h~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~ad~vi~~S~~~~~~-------~~~~~-~~v~G 249 (562)
+..+ |+|.++|+.+........ ...+. ......+.+...+. +|.++++|+..++. +...+ +..+|
T Consensus 142 ~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ng 220 (439)
T 3fro_A 142 KYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYI-ADIVTTVSRGYLIDEWGFFRNFEGKITYVFNG 220 (439)
T ss_dssp HHHCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHH-CSEEEESCHHHHHHTHHHHGGGTTSEEECCCC
T ss_pred hccCCCEEEEecccccccCchHHhCccccccccccceeeHhhhhhhh-ccEEEecCHHHHHHHhhhhhhcCCceeecCCC
Confidence 3334 899999987432110000 00000 00000122233333 79999999877763 23333 34479
Q ss_pred cCCCCcCcc--------hhhhHHhhcCCCCCccEEEEEeecc-ccCCHHHHHHHHHHHHHhc--CCcEEEEEeCCCCH--
Q 008544 250 VNPKFLEIG--------EKKMEQQQNGNKAFTKGAYYIGRMV-WSKGYEELLGLLNIYHKEL--AGLEMDLYGNGEDF-- 316 (562)
Q Consensus 250 Vd~~~~~~~--------~~~~~~~~~~~~~~~~~il~vGr~~-~~Kg~~~ll~a~~~l~~~~--~~~~l~ivG~g~~~-- 316 (562)
+|.+.|.+. .....+...+++++ ++++|+|++. +.||++.+++|+..+.++. ++++|+++|+|+..
T Consensus 221 vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~ 299 (439)
T 3fro_A 221 IDCSFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELE 299 (439)
T ss_dssp CCTTTSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHH
T ss_pred CCchhcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHH
Confidence 999888765 23334555677776 9999999999 9999999999999998876 89999999999876
Q ss_pred HHHHHHHHhcCCeeEEeCC-CC--ChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEee
Q 008544 317 DQIQRAAKKLKLVVRVYPG-RD--HADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTY 392 (562)
Q Consensus 317 ~~l~~~~~~l~l~~~~~~~-~~--~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~ 392 (562)
+.+++++++++ ++.++.+ .+ +..++|+.||++|+||..|+||++++||||||+|||+|+.++ .|++.++ +|+++
T Consensus 300 ~~l~~~~~~~~-~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~ 377 (439)
T 3fro_A 300 GWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILV 377 (439)
T ss_dssp HHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEE
T ss_pred HHHHHHHhhcC-CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEe
Confidence 89999999999 6665555 33 345899999999999999999999999999999999999998 8888877 88887
Q ss_pred C--CHHHHHHHHHHHHh-CCCC--CccHHHH---hcCCHHHHHHHHHHHHHhcCcc
Q 008544 393 D--GRNGFVEATLKALA-EEPA--QPTDAQT---HQLSWESATERFLQVAELVGDV 440 (562)
Q Consensus 393 ~--d~~~la~~i~~ll~-~~~~--~l~~~ar---~~~sw~~~~~~~~~~y~~~~~~ 440 (562)
+ |+++++++|.++++ +++. .|+++++ ++|+|+.+++++.++|+.....
T Consensus 378 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 378 KAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp CTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCC
T ss_pred CCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHh
Confidence 5 99999999999999 7775 7777777 6899999999999999988743
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=314.05 Aligned_cols=367 Identities=14% Similarity=0.115 Sum_probs=246.9
Q ss_pred CCeEEEEecccCC-------CcccccccHHHHHHHHHHcCCCeEEEEeecCCcccccc-ccCCCceeCCchhhHHHHHHH
Q 008544 49 QQHIAIFTTASLP-------WLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQ-VYPGNITFASPKEQEAYVRWW 120 (562)
Q Consensus 49 ~~rI~ivt~~~~P-------~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~-~~p~~i~~~~~~~~~~~~~~~ 120 (562)
.|||++++..++| ..||.+..+..++++|.++| |+|+++++......... ...+++.+..
T Consensus 20 mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G-~~V~v~~~~~~~~~~~~~~~~~~v~v~~----------- 87 (438)
T 3c48_A 20 HMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQG-IEVDIYTRATRPSQGEIVRVAENLRVIN----------- 87 (438)
T ss_dssp CCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTT-CEEEEEEECCCGGGCSEEEEETTEEEEE-----------
T ss_pred hheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcC-CEEEEEecCCCCCCcccccccCCeEEEE-----------
Confidence 3899999998888 45788888999999999998 99999998431110000 0001111110
Q ss_pred hhhccCCCCCcccccccccchhccchhhh-HHhHHhh-cCcC-CCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCC
Q 008544 121 LEDRTGFTSTFDTRFYPGKFAADKKSILA-VGDITEI-IPDE-EADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTN 196 (562)
Q Consensus 121 ~~~~~~~~~~~~i~~y~~r~~~~~~~~~~-~~~l~~~-i~~~-~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~ 196 (562)
....+...+. .... ...+.. ...+.+. +++. +||+||++..... ++ +..+++..+ |+|.++|+.
T Consensus 88 ----~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~-~~--~~~~~~~~~~p~v~~~h~~ 155 (438)
T 3c48_A 88 ----IAAGPYEGLS--KEEL---PTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSG-QV--GWLLRDLWRIPLIHTAHTL 155 (438)
T ss_dssp ----ECCSCSSSCC--GGGG---GGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHH-HH--HHHHHHHHTCCEEEECSSC
T ss_pred ----ecCCCccccc--hhHH---HHHHHHHHHHHHHHHHhccCCCCEEEeCCccHH-HH--HHHHHHHcCCCEEEEecCC
Confidence 0000000000 0000 000000 1112233 3333 4999999874322 22 222344334 899999977
Q ss_pred cHHHHhhhhc-hHHHHHHHHHHHHHHHHHhccEEEEcChhhhccC-------CCcc-ccccccCCCCcCcchhhh---HH
Q 008544 197 YLEYVKREKN-DRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYP-------NSIV-CNVHGVNPKFLEIGEKKM---EQ 264 (562)
Q Consensus 197 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~-------~~~~-~~v~GVd~~~~~~~~~~~---~~ 264 (562)
+......... ..........+.+++.+. +|.++++|+..++.. ...+ +..+|+|...+.+..... .+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r 234 (438)
T 3c48_A 156 AAVKNSYRDDSDTPESEARRICEQQLVDN-ADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSR 234 (438)
T ss_dssp HHHHSCC----CCHHHHHHHHHHHHHHHH-CSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHH
T ss_pred cccccccccccCCcchHHHHHHHHHHHhc-CCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhH
Confidence 5432111000 000111222233333443 899999998887732 2223 334699988776543322 45
Q ss_pred hhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcC--CcEEEEEeC----CCCHHHHHHHHHhcCCe--eEEeCCC
Q 008544 265 QQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELA--GLEMDLYGN----GEDFDQIQRAAKKLKLV--VRVYPGR 336 (562)
Q Consensus 265 ~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~--~~~l~ivG~----g~~~~~l~~~~~~l~l~--~~~~~~~ 336 (562)
...+++++.++++|+|++.+.||++.+++|+..+.++.| +++|+++|. |+..+.+++.++++++. +.+.+..
T Consensus 235 ~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~ 314 (438)
T 3c48_A 235 RELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPR 314 (438)
T ss_dssp HHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCC
T ss_pred HhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCC
Confidence 566777778899999999999999999999999998877 799999999 77788999999998864 6666665
Q ss_pred --CChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC
Q 008544 337 --DHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA 411 (562)
Q Consensus 337 --~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~ 411 (562)
+++.++|+.||++|+||..|+||++++|||+||+|||+++.++ .|++.++.+|++++ |+++++++|.++++|++.
T Consensus 315 ~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~ 394 (438)
T 3c48_A 315 PPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDET 394 (438)
T ss_dssp CHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHCHHH
T ss_pred ChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcCHHH
Confidence 4556999999999999999999999999999999999999998 99999999999985 999999999999998775
Q ss_pred --CccHHHH---hcCCHHHHHHHHHHHHHhcCcc
Q 008544 412 --QPTDAQT---HQLSWESATERFLQVAELVGDV 440 (562)
Q Consensus 412 --~l~~~ar---~~~sw~~~~~~~~~~y~~~~~~ 440 (562)
+|+++++ ++|+|+.+++++.++|+.....
T Consensus 395 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 395 RIRMGEDAVEHARTFSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhh
Confidence 7777776 4499999999999999987743
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-35 Score=307.31 Aligned_cols=348 Identities=15% Similarity=0.124 Sum_probs=247.1
Q ss_pred EEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCCccc
Q 008544 54 IFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTSTFDT 133 (562)
Q Consensus 54 ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i 133 (562)
+.+..| |..||++..+..++++|.++| |+|+++++.... ......+++.+..... .....
T Consensus 18 ~~~~~~-p~~GG~~~~~~~la~~L~~~G-~~V~v~~~~~~~--~~~~~~~~i~~~~~~~----------------~~~~~ 77 (394)
T 2jjm_A 18 IGITCY-PSVGGSGVVGTELGKQLAERG-HEIHFITSGLPF--RLNKVYPNIYFHEVTV----------------NQYSV 77 (394)
T ss_dssp EEEECC-C--CHHHHHHHHHHHHHHHTT-CEEEEECSSCC------CCCTTEEEECCCC----------------C----
T ss_pred eehhcC-CCCCCHHHHHHHHHHHHHhCC-CEEEEEeCCCCC--cccccCCceEEEeccc----------------ccccc
Confidence 555555 668999999999999999998 999999873210 0000011221111110 00000
Q ss_pred ccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhh----cCCEEEEEcCCcHHHHhhhhchHH
Q 008544 134 RFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAK----FRFVVGIVHTNYLEYVKREKNDRL 209 (562)
Q Consensus 134 ~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~----~~~vi~~~h~~~~~~~~~~~~~~~ 209 (562)
..++ .........+.+++++.+||+||++......+. ..+.++ ..|+|.++|+........ . .
T Consensus 78 ~~~~------~~~~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~~~~~~p~v~~~h~~~~~~~~~--~-~- 144 (394)
T 2jjm_A 78 FQYP------PYDLALASKMAEVAQRENLDILHVHYAIPHAIC---AYLAKQMIGERIKIVTTLHGTDITVLGS--D-P- 144 (394)
T ss_dssp CCSC------CHHHHHHHHHHHHHHHHTCSEEEECSSTTHHHH---HHHHHHHTTTCSEEEEECCHHHHHTTTT--C-T-
T ss_pred cccc------cccHHHHHHHHHHHHHcCCCEEEEcchhHHHHH---HHHHHHhhcCCCCEEEEEecCcccccCC--C-H-
Confidence 0000 001112344677788889999999976544222 112222 248899999643211111 0 0
Q ss_pred HHHHHHHHHHHHHHHhccEEEEcChhhhccC------C-CccccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeec
Q 008544 210 QAFLLEFVNSWLARVHCHKVIRLSAATQEYP------N-SIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRM 282 (562)
Q Consensus 210 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~------~-~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~ 282 (562)
..+.+.+.+.+. +|.++++|+..++.. . +..+..+|+|.+.+.+......+...+++++.+.++|+|++
T Consensus 145 ---~~~~~~~~~~~~-ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~ 220 (394)
T 2jjm_A 145 ---SLNNLIRFGIEQ-SDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTQLKKEYGISESEKILIHISNF 220 (394)
T ss_dssp ---TTHHHHHHHHHH-SSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCCCCHHHHHHTTCC---CEEEEECCC
T ss_pred ---HHHHHHHHHHhh-CCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCcchHHHHHHcCCCCCCeEEEEeecc
Confidence 111222233333 799999998887731 2 22334469999887765554555666776668899999999
Q ss_pred cccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCCCChHHHHhhcCEEEEccCCCCCcH
Q 008544 283 VWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGRDHADPIFHDYKVFLNPSTTDVVCT 360 (562)
Q Consensus 283 ~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~ 360 (562)
.+.||++.+++|+..+.++ ++++|+++|+|++.+++++.++++++. +.+.+..++..++|+.+|++|+||..|++|+
T Consensus 221 ~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~e~~~~ 299 (394)
T 2jjm_A 221 RKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGL 299 (394)
T ss_dssp CGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSEEEECCSCCSCCH
T ss_pred ccccCHHHHHHHHHHHHhh-CCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCEEEeccccCCCch
Confidence 9999999999999999876 679999999999999999999998864 5566778888899999999999999999999
Q ss_pred HHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH----hcCCHHHHHHHHH
Q 008544 361 ATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT----HQLSWESATERFL 431 (562)
Q Consensus 361 ~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw~~~~~~~~ 431 (562)
+++|||+||+|||+++.++ .|++.++.+|++++ |+++++++|.++++|++. +|+++++ +.|+|+.+++++.
T Consensus 300 ~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 379 (394)
T 2jjm_A 300 VLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYE 379 (394)
T ss_dssp HHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9999999999999999988 99999999999986 999999999999998875 6777766 7899999999999
Q ss_pred HHHHhcCc
Q 008544 432 QVAELVGD 439 (562)
Q Consensus 432 ~~y~~~~~ 439 (562)
++|+....
T Consensus 380 ~~~~~~~~ 387 (394)
T 2jjm_A 380 TIYYDVLR 387 (394)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHHh
Confidence 99998773
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=305.89 Aligned_cols=349 Identities=13% Similarity=0.082 Sum_probs=247.6
Q ss_pred cCCeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCC
Q 008544 48 KQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGF 127 (562)
Q Consensus 48 ~~~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~ 127 (562)
++|||+++++. +..||++.....++++|.++| |+|++++.... ...+ ... ..+...+.. .
T Consensus 39 ~~mkIl~v~~~--~~~GG~~~~~~~l~~~L~~~G-~~v~v~~~~~~----~~~~---------~~~-~~~~~~~~~-~-- 98 (416)
T 2x6q_A 39 KGRSFVHVNST--SFGGGVAEILHSLVPLLRSIG-IEARWFVIEGP----TEFF---------NVT-KTFHNALQG-N-- 98 (416)
T ss_dssp TTCEEEEEESC--SSSSTHHHHHHHHHHHHHHTT-CEEEEEECCCC----HHHH---------HHH-HHHHHHHTT-C--
T ss_pred hccEEEEEeCC--CCCCCHHHHHHHHHHHHHhCC-CeEEEEEccCC----cchh---------hhh-cccceeecc-c--
Confidence 45899999986 456888888889999999998 99999976210 0000 000 011111100 0
Q ss_pred CCCcccccccccchhccchhh-hHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhc
Q 008544 128 TSTFDTRFYPGKFAADKKSIL-AVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKN 206 (562)
Q Consensus 128 ~~~~~i~~y~~r~~~~~~~~~-~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~ 206 (562)
....+. .. ...... ....+.+.+++.+||+||+|++....+. . +..+..|+|.++|+.+....
T Consensus 99 -~~~~~~---~~---~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~-~~~~~~p~v~~~h~~~~~~~----- 162 (416)
T 2x6q_A 99 -ESLKLT---EE---MKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALI---E-FYEKKSPWLWRCHIDLSSPN----- 162 (416)
T ss_dssp -CSCCCC---HH---HHHHHHHHHHHHHHSSCGGGSSEEEEESSTTGGGG---G-GSCCCSCEEEECCSCCSSCC-----
T ss_pred -cccccc---HH---HHHHHHHHHHHHHHHHhhcCCCEEEEeccchhhHH---H-HHHhcCCEEEEEccccCCcc-----
Confidence 001111 00 001111 1234667788889999999987665332 1 22222689999997654211
Q ss_pred hHHHHHHHHHHHHHHHHHhccEEE-EcChhhhccCC-Cc-cccccccCCCCcCcc-----hhhhHHhhcCCCCCccEEEE
Q 008544 207 DRLQAFLLEFVNSWLARVHCHKVI-RLSAATQEYPN-SI-VCNVHGVNPKFLEIG-----EKKMEQQQNGNKAFTKGAYY 278 (562)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~ad~vi-~~S~~~~~~~~-~~-~~~v~GVd~~~~~~~-----~~~~~~~~~~~~~~~~~il~ 278 (562)
..+.+.+.+.+.+ +|.++ ++|+..++... .. .+..+|+|+..+.+. .....+...+++++.++++|
T Consensus 163 ----~~~~~~~~~~~~~--~~~~i~~~s~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~ 236 (416)
T 2x6q_A 163 ----REFWEFLRRFVEK--YDRYIFHLPEYVQPELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQ 236 (416)
T ss_dssp ----HHHHHHHHHHHTT--SSEEEESSGGGSCTTSCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEEE
T ss_pred ----HHHHHHHHHHHHh--CCEEEEechHHHHhhCCccceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCCcEEEE
Confidence 1122333334444 46665 67777666332 33 344469988654321 22233455677777899999
Q ss_pred EeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCC-----HHHHHHHHHhcCC--eeEEeCCCC-----ChHHHHhhc
Q 008544 279 IGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGED-----FDQIQRAAKKLKL--VVRVYPGRD-----HADPIFHDY 346 (562)
Q Consensus 279 vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~-----~~~l~~~~~~l~l--~~~~~~~~~-----~~~~l~~~a 346 (562)
+|++.+.||++.+++|+..+.++.|+++|+|+|+|+. .+.++++++++++ ++.+.|... +..++|+.+
T Consensus 237 vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~a 316 (416)
T 2x6q_A 237 VSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRAS 316 (416)
T ss_dssp ECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHC
T ss_pred EeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhC
Confidence 9999999999999999999998889999999999975 4667888888776 466665332 566999999
Q ss_pred CEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeCCHHHHHHHHHHHHhCCCC--CccHHHH----h
Q 008544 347 KVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYDGRNGFVEATLKALAEEPA--QPTDAQT----H 419 (562)
Q Consensus 347 dv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~--~l~~~ar----~ 419 (562)
|++|+||..|+||++++||||||+|||+++.++ .|++.++.+|++++|+++++++|.++++|++. +|+++++ +
T Consensus 317 d~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 396 (416)
T 2x6q_A 317 DVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVRDANEAVEVVLYLLKHPEVSKEMGAKAKERVRK 396 (416)
T ss_dssp SEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEESSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEECCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999987 99999999999999999999999999998875 7777776 5
Q ss_pred cCCHHHHHHHHHHHHHhcC
Q 008544 420 QLSWESATERFLQVAELVG 438 (562)
Q Consensus 420 ~~sw~~~~~~~~~~y~~~~ 438 (562)
+|+|+.+++++.++|+...
T Consensus 397 ~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 397 NFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HTBHHHHHHHHHHHHHTC-
T ss_pred HcCHHHHHHHHHHHHHHhh
Confidence 8999999999999998653
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=313.04 Aligned_cols=376 Identities=13% Similarity=0.067 Sum_probs=251.1
Q ss_pred hhccCCeEEEEecccCCC-----------cccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeC--Cch
Q 008544 45 MDRKQQHIAIFTTASLPW-----------LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFA--SPK 111 (562)
Q Consensus 45 m~~~~~rI~ivt~~~~P~-----------~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~--~~~ 111 (562)
|+++ |||+++++.++|. .||++..+..++++|.++| |+|+|+++...... .+.|....... ...
T Consensus 4 m~~~-MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G-~~V~v~~~~~~~~~-~~~~~~~~~~~~~~~g 80 (499)
T 2r60_A 4 MTRI-KHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG-VQVDIITRRIKDEN-WPEFSGEIDYYQETNK 80 (499)
T ss_dssp ---C-CEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTT-CEEEEEEECCCBTT-BGGGCCSEEECTTCSS
T ss_pred cccc-ceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcC-CeEEEEeCCCCccc-ccchhhhHHhccCCCC
Confidence 4444 9999999988773 5888888999999999998 99999987331100 00111000000 000
Q ss_pred hhHHHHHHHhhhccCCCCCcccccccc-cchhccchhhhHHhHHhhcCc--CCCcEEEecCCchhhhhhchHHHHhhcC-
Q 008544 112 EQEAYVRWWLEDRTGFTSTFDTRFYPG-KFAADKKSILAVGDITEIIPD--EEADIAVLEEPEHLTWFHHGKRWKAKFR- 187 (562)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~i~~y~~-r~~~~~~~~~~~~~l~~~i~~--~~pDvV~~~~~~~~~~~~~~~~~~~~~~- 187 (562)
.++...+.......+. ....... .....+.+++++ .+|||||+|.... .++ +..+++..+
T Consensus 81 -----------v~v~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~~~~~Divh~~~~~~-~~~--~~~~~~~~~~ 144 (499)
T 2r60_A 81 -----------VRIVRIPFGGDKFLPKEELWPYLH--EYVNKIINFYREEGKFPQVVTTHYGDG-GLA--GVLLKNIKGL 144 (499)
T ss_dssp -----------EEEEEECCSCSSCCCGGGCGGGHH--HHHHHHHHHHHHHTCCCSEEEEEHHHH-HHH--HHHHHHHHCC
T ss_pred -----------eEEEEecCCCcCCcCHHHHHHHHH--HHHHHHHHHHHhcCCCCCEEEEcCCcc-hHH--HHHHHHhcCC
Confidence 0000000000000000 0000000 012345666666 5899999997542 223 233444444
Q ss_pred CEEEEEcCCcHHHHhhhhc-----hHHHHH----HHHHHHHHHHHHhccEEEEcChhhhccCC--------------Ccc
Q 008544 188 FVVGIVHTNYLEYVKREKN-----DRLQAF----LLEFVNSWLARVHCHKVIRLSAATQEYPN--------------SIV 244 (562)
Q Consensus 188 ~vi~~~h~~~~~~~~~~~~-----~~~~~~----~~~~~~~~~~~~~ad~vi~~S~~~~~~~~--------------~~~ 244 (562)
|+|.++|+.+......... ..+... ....+.+.+.+. +|.++++|+..++... ..+
T Consensus 145 p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki 223 (499)
T 2r60_A 145 PFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSY-ADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKF 223 (499)
T ss_dssp CEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHH-CSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGE
T ss_pred cEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhc-CCEEEECCHHHHHHHHhhhcccccccccCCCCe
Confidence 8999999775433221100 111111 111222333333 8999999988877322 122
Q ss_pred -ccccccCCCCcCcchh----hhHHhhcC-----CCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCC-cEEEEEeC-
Q 008544 245 -CNVHGVNPKFLEIGEK----KMEQQQNG-----NKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAG-LEMDLYGN- 312 (562)
Q Consensus 245 -~~v~GVd~~~~~~~~~----~~~~~~~~-----~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~-~~l~ivG~- 312 (562)
+..+|+|.+.|.+... ...+...+ .+++.++|+|+|++.+.||++.+++|+..+.++.++ ++|+|+|+
T Consensus 224 ~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~ 303 (499)
T 2r60_A 224 SVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGI 303 (499)
T ss_dssp EECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSC
T ss_pred EEECCCcChhhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCC
Confidence 2236999887765432 23333444 455678999999999999999999999999876555 58999998
Q ss_pred -CC------C-------HHHHHHHHHhcCCe--eEEeCCC--CChHHHHhhc----CEEEEccCCCCCcHHHHHHHHcCC
Q 008544 313 -GE------D-------FDQIQRAAKKLKLV--VRVYPGR--DHADPIFHDY----KVFLNPSTTDVVCTATAEALAMGK 370 (562)
Q Consensus 313 -g~------~-------~~~l~~~~~~l~l~--~~~~~~~--~~~~~l~~~a----dv~v~pS~~E~~~~~~lEAma~G~ 370 (562)
|+ . .+++++.++++++. +.+++.. +++.++|+.| |++|+||..|+||++++||||||+
T Consensus 304 ~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~ 383 (499)
T 2r60_A 304 ENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL 383 (499)
T ss_dssp SBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTC
T ss_pred CCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCC
Confidence 43 1 67899999998875 5666664 5666999999 999999999999999999999999
Q ss_pred cEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC--CccHHHH----hcCCHHHHHHHHHHHHHhcCcc
Q 008544 371 IVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA--QPTDAQT----HQLSWESATERFLQVAELVGDV 440 (562)
Q Consensus 371 PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~--~l~~~ar----~~~sw~~~~~~~~~~y~~~~~~ 440 (562)
|||+|+.++ .|++.++.+|++++ |+++++++|.++++|++. +|+++++ ++|+|+.+++++.++|+.....
T Consensus 384 PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 384 PAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp CEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred CEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 999999988 99999999999985 999999999999998875 7777776 5599999999999999987643
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=307.38 Aligned_cols=375 Identities=14% Similarity=0.050 Sum_probs=245.7
Q ss_pred CeEEEEecccCCC--cccccccHHHHHHHHHHcCCCeEEEEeecCCccccc-----------------ccc---CCCcee
Q 008544 50 QHIAIFTTASLPW--LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQK-----------------QVY---PGNITF 107 (562)
Q Consensus 50 ~rI~ivt~~~~P~--~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~-----------------~~~---p~~i~~ 107 (562)
|||+++++.++|. .||++..+..++++|.++| |+|+|+++........ .++ .+++.+
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G-~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 79 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADG-VDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGI 79 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTT-CEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcC-CEEEEEecCccccccccccceeEEEecccCCcEEEEEEEECCcEE
Confidence 6999999988885 6888899999999999998 9999999843110000 000 011111
Q ss_pred CCchhhHHHHHHHhhhccC-CCCCcccccccccchhccchhhhHHhHHhhcC----cCCCcEEEecCCchhhhhhchHHH
Q 008544 108 ASPKEQEAYVRWWLEDRTG-FTSTFDTRFYPGKFAADKKSILAVGDITEIIP----DEEADIAVLEEPEHLTWFHHGKRW 182 (562)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~-~~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~----~~~pDvV~~~~~~~~~~~~~~~~~ 182 (562)
...... .+ + .+.. .........|+. ...+.......+.++++ +.+|||||+|.+... ++ +..+
T Consensus 80 ~~~~~~-~~---~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~-~~--~~~~ 147 (485)
T 2qzs_A 80 YLIDAP-HL---Y--DRPGSPYHDTNLFAYTD---NVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAG-LA--PAYL 147 (485)
T ss_dssp EEEECH-HH---H--CCSSCSSBCTTSCBCTT---HHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGT-TH--HHHH
T ss_pred EEEeCh-hh---c--cCCCCccCCcccCCCCc---hHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchh-HH--HHHH
Confidence 000000 00 0 0000 000000000000 00010011223444444 378999999985432 22 2223
Q ss_pred H-hhcC-CEEEEEcCCcHHH-H-----hhhhch--HHH-----HHHHHHHHHHHHHHhccEEEEcChhhhccCC------
Q 008544 183 K-AKFR-FVVGIVHTNYLEY-V-----KREKND--RLQ-----AFLLEFVNSWLARVHCHKVIRLSAATQEYPN------ 241 (562)
Q Consensus 183 ~-~~~~-~vi~~~h~~~~~~-~-----~~~~~~--~~~-----~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~------ 241 (562)
. +..+ |+|.++|+.+... . ...+.. .+. ......+.+...+. +|.++++|+..++...
T Consensus 148 ~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ad~vi~~S~~~~~~~~~~~~~~ 226 (485)
T 2qzs_A 148 AARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYY-ADHITAVSPTYAREITEPQFAY 226 (485)
T ss_dssp HHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHH-CSEEEESSHHHHHHTTSHHHHT
T ss_pred hhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHh-cCeEEecCHHHHHHHhccccCc
Confidence 3 3334 8999999763210 0 000000 000 00000112222232 7999999988877432
Q ss_pred ------------Ccc-ccccccCCCCcCcch-------------------hhhHHhhcCCCC--CccEEEEEeeccccCC
Q 008544 242 ------------SIV-CNVHGVNPKFLEIGE-------------------KKMEQQQNGNKA--FTKGAYYIGRMVWSKG 287 (562)
Q Consensus 242 ------------~~~-~~v~GVd~~~~~~~~-------------------~~~~~~~~~~~~--~~~~il~vGr~~~~Kg 287 (562)
..+ +..+|||.+.|.+.. +...+...++++ +.++++|+||+.++||
T Consensus 227 ~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg 306 (485)
T 2qzs_A 227 GMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKG 306 (485)
T ss_dssp TCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGC
T ss_pred chHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccC
Confidence 222 334699988776543 223344556654 6789999999999999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEeCCC--CHHHHHHHHHhcCCeeEEeCCCCCh--HHHHhhcCEEEEccCCCCCcHHHH
Q 008544 288 YEELLGLLNIYHKELAGLEMDLYGNGE--DFDQIQRAAKKLKLVVRVYPGRDHA--DPIFHDYKVFLNPSTTDVVCTATA 363 (562)
Q Consensus 288 ~~~ll~a~~~l~~~~~~~~l~ivG~g~--~~~~l~~~~~~l~l~~~~~~~~~~~--~~l~~~adv~v~pS~~E~~~~~~l 363 (562)
++.+++|+..+.+. +++|+|+|+|+ ..+.+++++++++.++.++.+..+. .++|+.||++|+||..|+||++++
T Consensus 307 ~~~li~a~~~l~~~--~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~g~~~l 384 (485)
T 2qzs_A 307 LDLVLEALPGLLEQ--GGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQL 384 (485)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHH
T ss_pred HHHHHHHHHHHhhC--CcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCCEEEECCccCCCcHHHH
Confidence 99999999999763 89999999987 3688899998887667655554433 489999999999999999999999
Q ss_pred HHHHcCCcEEeeCCCC-ccccccC---------CceEeeC--CHHHHHHHHHHHH---hCCCC--CccHHHH-hcCCHHH
Q 008544 364 EALAMGKIVVCANHPS-NDFFKQF---------PNCRTYD--GRNGFVEATLKAL---AEEPA--QPTDAQT-HQLSWES 425 (562)
Q Consensus 364 EAma~G~PVI~t~~~~-~e~v~~~---------~~g~~~~--d~~~la~~i~~ll---~~~~~--~l~~~ar-~~~sw~~ 425 (562)
||||||+|||+|+.++ .|++.++ .+|++++ |+++++++|.+++ +|++. +|+++++ +.|||+.
T Consensus 385 EAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 464 (485)
T 2qzs_A 385 YGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQV 464 (485)
T ss_dssp HHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHCCCCHHH
T ss_pred HHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCHHH
Confidence 9999999999999988 9999998 8999985 9999999999999 56654 7887777 8999999
Q ss_pred HHHHHHHHHHhcCcc
Q 008544 426 ATERFLQVAELVGDV 440 (562)
Q Consensus 426 ~~~~~~~~y~~~~~~ 440 (562)
+++++.++|+.....
T Consensus 465 ~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 465 AAKSYRELYYRLKLE 479 (485)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhhhh
Confidence 999999999987643
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-35 Score=304.92 Aligned_cols=352 Identities=17% Similarity=0.205 Sum_probs=249.3
Q ss_pred cCCeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCC
Q 008544 48 KQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGF 127 (562)
Q Consensus 48 ~~~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~ 127 (562)
++|||+++++.++|..+|.+.....++++|.++| |+|+++++..... .++....... . ..
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~~----~~~~~~~~~~-~-------------~~- 78 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAG-HEVSVLAPASPHV----KLPDYVVSGG-K-------------AV- 78 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTT-CEEEEEESCCTTS----CCCTTEEECC-C-------------CC-
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCC-CeEEEEecCCccc----cCCcccccCC-c-------------EE-
Confidence 3489999998777777888899999999999998 9999998833111 0110000000 0 00
Q ss_pred CCCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhc-CCEEEEEcCCcHHHHhhhhc
Q 008544 128 TSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKF-RFVVGIVHTNYLEYVKREKN 206 (562)
Q Consensus 128 ~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~-~~vi~~~h~~~~~~~~~~~~ 206 (562)
.++... ..............+.+++++.+||+||++.+....+ +..+.+.. .|+|.++|+.+....
T Consensus 79 ----~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~---~~~~~~~~~~~~i~~~h~~~~~~~----- 145 (406)
T 2gek_A 79 ----PIPYNG-SVARLRFGPATHRKVKKWIAEGDFDVLHIHEPNAPSL---SMLALQAAEGPIVATFHTSTTKSL----- 145 (406)
T ss_dssp -----------------CCHHHHHHHHHHHHHHCCSEEEEECCCSSSH---HHHHHHHEESSEEEEECCCCCSHH-----
T ss_pred ----eccccC-CcccccccHHHHHHHHHHHHhcCCCEEEECCccchHH---HHHHHHhcCCCEEEEEcCcchhhh-----
Confidence 000000 0000000001124467778888999999998766532 22233333 389999998654321
Q ss_pred hHHHHHHHHHHHHHHHHHhccEEEEcChhhhcc-----CCCccccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEee
Q 008544 207 DRLQAFLLEFVNSWLARVHCHKVIRLSAATQEY-----PNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGR 281 (562)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~-----~~~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr 281 (562)
....+.+.+. ...+ .+|.++++|+..++. +.+.+...+|+|...+.+... ....+.+.+.++|+|+
T Consensus 146 --~~~~~~~~~~-~~~~-~~d~ii~~s~~~~~~~~~~~~~~~~vi~~~v~~~~~~~~~~-----~~~~~~~~~~i~~~G~ 216 (406)
T 2gek_A 146 --TLSVFQGILR-PYHE-KIIGRIAVSDLARRWQMEALGSDAVEIPNGVDVASFADAPL-----LDGYPREGRTVLFLGR 216 (406)
T ss_dssp --HHHHHHSTTH-HHHT-TCSEEEESSHHHHHHHHHHHSSCEEECCCCBCHHHHHTCCC-----CTTCSCSSCEEEEESC
T ss_pred --hHHHHHHHHH-HHHh-hCCEEEECCHHHHHHHHHhcCCCcEEecCCCChhhcCCCch-----hhhccCCCeEEEEEee
Confidence 1112222222 2222 379999999888773 333343335777655443221 1222334679999999
Q ss_pred c-cccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCCh--HHHHhhcCEEEEccC-CCC
Q 008544 282 M-VWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHA--DPIFHDYKVFLNPST-TDV 357 (562)
Q Consensus 282 ~-~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~--~~l~~~adv~v~pS~-~E~ 357 (562)
+ .+.||++.+++++..+.++.|+++|+++|.|+. +.+++.++++..++.+++..++. .++|+.+|++|+||. .|+
T Consensus 217 ~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~ 295 (406)
T 2gek_A 217 YDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGES 295 (406)
T ss_dssp TTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCS
T ss_pred eCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCC
Confidence 9 999999999999999998889999999999988 88888887774457777776655 699999999999996 999
Q ss_pred CcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEee--CCHHHHHHHHHHHHhCCCC--CccHHHH---hcCCHHHHHHH
Q 008544 358 VCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTY--DGRNGFVEATLKALAEEPA--QPTDAQT---HQLSWESATER 429 (562)
Q Consensus 358 ~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~--~d~~~la~~i~~ll~~~~~--~l~~~ar---~~~sw~~~~~~ 429 (562)
+|++++|||+||+|||+++.++ .|++.++.+|+++ +|+++++++|.+++++++. .|+++++ +.|+|+..+++
T Consensus 296 ~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 375 (406)
T 2gek_A 296 FGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWSVVSAQ 375 (406)
T ss_dssp SCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGBHHHHHHH
T ss_pred CchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 9999999999999999999987 9999999999998 5999999999999998875 6777766 68999999999
Q ss_pred HHHHHHhcCcccc
Q 008544 430 FLQVAELVGDVVT 442 (562)
Q Consensus 430 ~~~~y~~~~~~~~ 442 (562)
+.++|+.......
T Consensus 376 ~~~~~~~~~~~~~ 388 (406)
T 2gek_A 376 IMRVYETVSGAGI 388 (406)
T ss_dssp HHHHHHHHCCTTC
T ss_pred HHHHHHHHHhhcc
Confidence 9999998775444
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=306.55 Aligned_cols=376 Identities=14% Similarity=0.105 Sum_probs=245.5
Q ss_pred CeEEEEecccCCC--cccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccC-----------------------CC
Q 008544 50 QHIAIFTTASLPW--LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYP-----------------------GN 104 (562)
Q Consensus 50 ~rI~ivt~~~~P~--~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p-----------------------~~ 104 (562)
|||+++++.++|. .||++..+..++++|.++| |+|+|+++....... .++ ++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G-~~V~vi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g 77 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHG-VRTRTLIPGYPAVKA--AVTDPVKCFEFTDLLGEKADLLEVQHER 77 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT-CEEEEEEECCHHHHH--HCCSCEEEEEESCSSSCCEEEEEEEETT
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcC-CeEEEEecccccccc--cccccceeEEEEEecCCeEEEEEEEecC
Confidence 6999999988884 6888899999999999998 999999984321000 000 01
Q ss_pred ceeCCchhhHHHHHHHhhhcc-CCCCCcccccccccchhccchhhhHHhHHhhc-CcCCCcEEEecCCchhhhhhchHHH
Q 008544 105 ITFASPKEQEAYVRWWLEDRT-GFTSTFDTRFYPGKFAADKKSILAVGDITEII-PDEEADIAVLEEPEHLTWFHHGKRW 182 (562)
Q Consensus 105 i~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i-~~~~pDvV~~~~~~~~~~~~~~~~~ 182 (562)
+.+...... . +. .+. ..........++............+..+.+.+ ++.+|||||+|..... ++ +..+
T Consensus 78 v~v~~~~~~-~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~-~~--~~~~ 148 (485)
T 1rzu_A 78 LDLLILDAP-A----YY-ERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAA-MT--PVYM 148 (485)
T ss_dssp EEEEEEECH-H----HH-CSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHT-TH--HHHH
T ss_pred ceEEEEeCh-H----Hh-CCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchh-HH--HHHH
Confidence 111000000 0 00 000 00000000000000000000000122233333 6789999999974322 22 2223
Q ss_pred Hhh--cC-CEEEEEcCCcHHH------Hhhhhch--HHH----HHH-HHHHHHHHHHHhccEEEEcChhhhccCC-----
Q 008544 183 KAK--FR-FVVGIVHTNYLEY------VKREKND--RLQ----AFL-LEFVNSWLARVHCHKVIRLSAATQEYPN----- 241 (562)
Q Consensus 183 ~~~--~~-~vi~~~h~~~~~~------~~~~~~~--~~~----~~~-~~~~~~~~~~~~ad~vi~~S~~~~~~~~----- 241 (562)
.+. .+ |+|.++|+.+... ....+.. .+. ... ...+.+...+. +|.++++|+..++...
T Consensus 149 ~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ad~vi~~S~~~~~~~~~~~~g 227 (485)
T 1rzu_A 149 RYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQT-ATALSTVSPSYAEEILTAEFG 227 (485)
T ss_dssp HHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHH-CSEEEESCHHHHHHTTSHHHH
T ss_pred hhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhh-cCEEEecCHhHHHHHhccccC
Confidence 321 34 8999999763210 0000000 000 000 00112222233 7999999988877432
Q ss_pred -----------Ccc-ccccccCCCCcCcch-------------------hhhHHhhcCCCCC-ccEEEEEeeccccCCHH
Q 008544 242 -----------SIV-CNVHGVNPKFLEIGE-------------------KKMEQQQNGNKAF-TKGAYYIGRMVWSKGYE 289 (562)
Q Consensus 242 -----------~~~-~~v~GVd~~~~~~~~-------------------~~~~~~~~~~~~~-~~~il~vGr~~~~Kg~~ 289 (562)
..+ +..+|||.+.|.+.. +...+...+++++ .++++|+||+.++||++
T Consensus 228 ~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~ 307 (485)
T 1rzu_A 228 MGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGID 307 (485)
T ss_dssp TTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHH
T ss_pred cchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHH
Confidence 222 233699988776543 2233445666654 67999999999999999
Q ss_pred HHHHHHHHHHHhcCCcEEEEEeCCCC--HHHHHHHHHhcCCeeEEeCCCCCh--HHHHhhcCEEEEccCCCCCcHHHHHH
Q 008544 290 ELLGLLNIYHKELAGLEMDLYGNGED--FDQIQRAAKKLKLVVRVYPGRDHA--DPIFHDYKVFLNPSTTDVVCTATAEA 365 (562)
Q Consensus 290 ~ll~a~~~l~~~~~~~~l~ivG~g~~--~~~l~~~~~~l~l~~~~~~~~~~~--~~l~~~adv~v~pS~~E~~~~~~lEA 365 (562)
.+++|+..+.+. +++|+|+|+|+. .+.+++++++++.++.++.+..+. .++|+.||++|+||..|+||++++||
T Consensus 308 ~li~a~~~l~~~--~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEA 385 (485)
T 1rzu_A 308 LMAEAVDEIVSL--GGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYA 385 (485)
T ss_dssp HHHTTHHHHHHT--TCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHH
T ss_pred HHHHHHHHHHhc--CceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCEEEECcccCCCCHHHHHH
Confidence 999999999763 899999999974 688899998887667755554433 38999999999999999999999999
Q ss_pred HHcCCcEEeeCCCC-ccccccC---------CceEeeC--CHHHHHHHHHHHH---hCCCC--CccHHHH-hcCCHHHHH
Q 008544 366 LAMGKIVVCANHPS-NDFFKQF---------PNCRTYD--GRNGFVEATLKAL---AEEPA--QPTDAQT-HQLSWESAT 427 (562)
Q Consensus 366 ma~G~PVI~t~~~~-~e~v~~~---------~~g~~~~--d~~~la~~i~~ll---~~~~~--~l~~~ar-~~~sw~~~~ 427 (562)
||||+|||+|+.++ .|++.++ .+|++++ |+++++++|.+++ +|++. +|+++++ +.|+|+.++
T Consensus 386 ma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~ 465 (485)
T 1rzu_A 386 LRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSA 465 (485)
T ss_dssp HHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTCCCBHHHHH
T ss_pred HHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCChHHHH
Confidence 99999999999998 9999998 8999985 9999999999999 66654 7888887 899999999
Q ss_pred HHHHHHHHhcCcc
Q 008544 428 ERFLQVAELVGDV 440 (562)
Q Consensus 428 ~~~~~~y~~~~~~ 440 (562)
+++.++|+.....
T Consensus 466 ~~~~~~y~~~~~~ 478 (485)
T 1rzu_A 466 GLYAALYSQLISK 478 (485)
T ss_dssp HHHHHHHHHHTC-
T ss_pred HHHHHHHHHhhCC
Confidence 9999999987643
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=303.31 Aligned_cols=213 Identities=17% Similarity=0.191 Sum_probs=168.1
Q ss_pred hccEEEEcChhhhc-c---C------------CCccccccccCCCCcCcchhh--------------------hHHhhcC
Q 008544 225 HCHKVIRLSAATQE-Y---P------------NSIVCNVHGVNPKFLEIGEKK--------------------MEQQQNG 268 (562)
Q Consensus 225 ~ad~vi~~S~~~~~-~---~------------~~~~~~v~GVd~~~~~~~~~~--------------------~~~~~~~ 268 (562)
+||.|+++|+..++ + . .+...+.||||.+.|+|.... ......+
T Consensus 241 ~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~g 320 (536)
T 3vue_A 241 EADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAG 320 (536)
T ss_dssp HCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTT
T ss_pred hccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcC
Confidence 48999999987655 1 0 122344579999887764211 1122234
Q ss_pred C--CCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCC--HHHHHHHHHhcCCeeEEeCCCCCh--HHH
Q 008544 269 N--KAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGED--FDQIQRAAKKLKLVVRVYPGRDHA--DPI 342 (562)
Q Consensus 269 ~--~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~--~~~l~~~~~~l~l~~~~~~~~~~~--~~l 342 (562)
+ .++.++|+|+||+.++||++.+++|+.++.++ +.+|+++|.|+. ...++.....++.++.+.+..++. ..+
T Consensus 321 l~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~--~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 398 (536)
T 3vue_A 321 LPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE--DVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLI 398 (536)
T ss_dssp SCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS--SCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHH
T ss_pred CCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhh--CCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHH
Confidence 4 45678999999999999999999999999765 688999998875 356667777777778887665543 489
Q ss_pred HhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEe----------eC--CHHHHHHHHHHHHhC-
Q 008544 343 FHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRT----------YD--GRNGFVEATLKALAE- 408 (562)
Q Consensus 343 ~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~----------~~--d~~~la~~i~~ll~~- 408 (562)
|+.||+||+||.+|+||++++|||+||+|||+|+.|| .|+|.++.+|+. ++ |+++|+++|.++++.
T Consensus 399 ~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~ 478 (536)
T 3vue_A 399 MAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVV 478 (536)
T ss_dssp HHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHT
T ss_pred HHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999998 999999999983 43 789999999998863
Q ss_pred -CCC--CccHHHH-hcCCHHHHHHHHHHHHHhcCc
Q 008544 409 -EPA--QPTDAQT-HQLSWESATERFLQVAELVGD 439 (562)
Q Consensus 409 -~~~--~l~~~ar-~~~sw~~~~~~~~~~y~~~~~ 439 (562)
++. +|.+++. ++|||++++++|+++|+....
T Consensus 479 ~~~~~~~~~~~am~~~fSW~~~A~~y~~ly~~L~~ 513 (536)
T 3vue_A 479 GTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLGV 513 (536)
T ss_dssp TSHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Confidence 222 5555554 789999999999999998653
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-34 Score=294.80 Aligned_cols=345 Identities=13% Similarity=0.060 Sum_probs=241.2
Q ss_pred CeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCC
Q 008544 50 QHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTS 129 (562)
Q Consensus 50 ~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (562)
|||++++..++| .+|++..+..++++|.++| |+|+++++.... ..++++.+.. ...
T Consensus 1 MkIl~i~~~~~~-~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~-----~~~~~~~v~~---------------~~~-- 56 (374)
T 2iw1_A 1 MIVAFCLYKYFP-FGGLQRDFMRIASTVAARG-HHVRVYTQSWEG-----DCPKAFELIQ---------------VPV-- 56 (374)
T ss_dssp -CEEEECSEECT-TCHHHHHHHHHHHHHHHTT-CCEEEEESEECS-----CCCTTCEEEE---------------CCC--
T ss_pred CeEEEEEeecCC-CcchhhHHHHHHHHHHhCC-CeEEEEecCCCC-----CCCCCcEEEE---------------Ecc--
Confidence 689999998877 5888899999999999998 999999873210 0111111100 000
Q ss_pred CcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcHHHHhhhhch
Q 008544 130 TFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYLEYVKREKND 207 (562)
Q Consensus 130 ~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~~~~~~~~~~ 207 (562)
... . ...........+.+.+++.+||+||++......... +..+.. +.+.+.|..... . ..
T Consensus 57 -~~~---~----~~~~~~~~~~~l~~~i~~~~~Dvv~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~--~~ 119 (374)
T 2iw1_A 57 -KSH---T----NHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVY----FAADVCYAEKVAQEKGFLYR---L--TS 119 (374)
T ss_dssp -CCS---S----HHHHHHHHHHHHHHHHHHSCCSEEEESSCCTTCSEE----ECCSCCHHHHHHHHCCHHHH---T--SH
T ss_pred -Ccc---c----chhhHHHHHHHHHHHHhccCCCEEEEecCCCCceee----eccccccceeeeecccchhh---h--cH
Confidence 000 0 000011113346777888899999998754321110 111101 112112211110 0 00
Q ss_pred HHHHHHHHHHHHHHHH-HhccEEEEcChhhhccC-------CCcc-ccccccCCCCcCcchh----hhHHhhcCCCCCcc
Q 008544 208 RLQAFLLEFVNSWLAR-VHCHKVIRLSAATQEYP-------NSIV-CNVHGVNPKFLEIGEK----KMEQQQNGNKAFTK 274 (562)
Q Consensus 208 ~~~~~~~~~~~~~~~~-~~ad~vi~~S~~~~~~~-------~~~~-~~v~GVd~~~~~~~~~----~~~~~~~~~~~~~~ 274 (562)
.......+.+...+ ..+|.++++|+..++.. ...+ +..+|+|.+.+.+... ...+...+++++.+
T Consensus 120 --~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T 2iw1_A 120 --RYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQN 197 (374)
T ss_dssp --HHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCE
T ss_pred --HHHHHHHHHHHHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhCCCCCCe
Confidence 01122222222222 14799999998877732 2223 3336898877654332 23355667777788
Q ss_pred EEEEEeeccccCCHHHHHHHHHHHHHh-cCCcEEEEEeCCCCHHHHHHHHHhcCC--eeEEeCCCCChHHHHhhcCEEEE
Q 008544 275 GAYYIGRMVWSKGYEELLGLLNIYHKE-LAGLEMDLYGNGEDFDQIQRAAKKLKL--VVRVYPGRDHADPIFHDYKVFLN 351 (562)
Q Consensus 275 ~il~vGr~~~~Kg~~~ll~a~~~l~~~-~~~~~l~ivG~g~~~~~l~~~~~~l~l--~~~~~~~~~~~~~l~~~adv~v~ 351 (562)
+++|+|++.+.||++.+++++..+.++ .++++|+++|.|+ .+.+++.++++++ ++.+++..++..++|+.+|++|+
T Consensus 198 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~ 276 (374)
T 2iw1_A 198 LLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDK-PRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLH 276 (374)
T ss_dssp EEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC-CHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEE
T ss_pred EEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCC-HHHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCEEEe
Confidence 999999999999999999999998776 5789999999987 4778888888876 47778888889999999999999
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC---CHHHHHHHHHHHHhCCCC--CccHHHH---hcCC
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD---GRNGFVEATLKALAEEPA--QPTDAQT---HQLS 422 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~---d~~~la~~i~~ll~~~~~--~l~~~ar---~~~s 422 (562)
||..|+||++++||||||+|||+++.++ .|++.++.+|++++ |+++++++|.++++|++. .|+++++ ++++
T Consensus 277 ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 356 (374)
T 2iw1_A 277 PAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQD 356 (374)
T ss_dssp CCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSC
T ss_pred ccccCCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEeCCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999987 99999999999885 999999999999998875 7887777 6789
Q ss_pred HHHHHHHHHHHHHhcC
Q 008544 423 WESATERFLQVAELVG 438 (562)
Q Consensus 423 w~~~~~~~~~~y~~~~ 438 (562)
|+...+++.++++...
T Consensus 357 ~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 357 LYSLPEKAADIITGGL 372 (374)
T ss_dssp CSCHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999987653
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=295.57 Aligned_cols=335 Identities=13% Similarity=0.056 Sum_probs=237.4
Q ss_pred CeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCC
Q 008544 50 QHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTS 129 (562)
Q Consensus 50 ~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (562)
|||+++++.+ |..||.+.....++++|.++ |+|++++.... . ...++....+ .. ...... + ..
T Consensus 1 MkI~~v~~~~-p~~gG~~~~~~~l~~~L~~~--~~V~v~~~~~~--g-~~~~~~~~~~---~~--~~~~~~---~-~~-- 63 (413)
T 3oy2_A 1 MKLIIVGAHS-SVPSGYGRVMRAIVPRISKA--HEVIVFGIHAF--G-RSVHANIEEF---DA--QTAEHV---R-GL-- 63 (413)
T ss_dssp CEEEEEEECT-TCCSHHHHHHHHHHHHHTTT--SEEEEEEESCC--S-CCSCSSSEEE---EH--HHHHHH---T-TC--
T ss_pred CeEEEecCCC-CCCCCHHHHHHHHHHHHHhc--CCeEEEeecCC--C-cccccccccC---Cc--cccccc---c-cc--
Confidence 7999999865 77789899999999999997 99999987321 1 1111110000 00 100000 0 00
Q ss_pred CcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHH--hhcC---CEEEEEcCCcHHHHhhh
Q 008544 130 TFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWK--AKFR---FVVGIVHTNYLEYVKRE 204 (562)
Q Consensus 130 ~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~--~~~~---~vi~~~h~~~~~~~~~~ 204 (562)
... .+.+..+.+.+++.+||+||++.+... + +..+. .+.. +.+...|.........
T Consensus 64 -~~~-------------~~~~~~l~~~l~~~~~Div~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 124 (413)
T 3oy2_A 64 -NEQ-------------GFYYSGLSEFIDVHKPDIVMIYNDPIV--I--GNYLLAMGKCSHRTKIVLYVDLVSKNIREN- 124 (413)
T ss_dssp -CST-------------TCCHHHHHHHHHHHCCSEEEEEECHHH--H--HHHHHHGGGCCSCCEEEEEECCCSBSCCGG-
T ss_pred -ccc-------------cchHHHHHHHHHhcCCCEEEEcchHHH--H--HHHHHHhccCCCCCceeeeccccchhhHHH-
Confidence 000 011223566777889999999955433 2 11122 1211 3455566433221100
Q ss_pred hchHHHHHHHHHHHHHHHHHhcc--EEEEcChhhhccC-----CCc-cccccccCCCCcCcchhhhHHhhcCCCC--Ccc
Q 008544 205 KNDRLQAFLLEFVNSWLARVHCH--KVIRLSAATQEYP-----NSI-VCNVHGVNPKFLEIGEKKMEQQQNGNKA--FTK 274 (562)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~ad--~vi~~S~~~~~~~-----~~~-~~~v~GVd~~~~~~~~~~~~~~~~~~~~--~~~ 274 (562)
+...+.+ +| .++++|+..++.. ... .+..+|+|.+.+. ..+...+.++ +.+
T Consensus 125 ------------~~~~~~~--~~~~~ii~~S~~~~~~~~~~~~~~~~~vi~ngvd~~~~~-----~~~~~~~~~~~~~~~ 185 (413)
T 3oy2_A 125 ------------LWWIFSH--PKVVGVMAMSKCWISDICNYGCKVPINIVSHFVDTKTIY-----DARKLVGLSEYNDDV 185 (413)
T ss_dssp ------------GGGGGGC--TTEEEEEESSTHHHHHHHHTTCCSCEEECCCCCCCCCCT-----THHHHTTCGGGTTSE
T ss_pred ------------HHHHHhc--cCCceEEEcCHHHHHHHHHcCCCCceEEeCCCCCHHHHH-----HHHHhcCCCcccCce
Confidence 1122222 56 9999998887621 222 3334699887762 2234455555 688
Q ss_pred EEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCH------HHHHHHHHhcCCee--------EEeCC-CC--
Q 008544 275 GAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDF------DQIQRAAKKLKLVV--------RVYPG-RD-- 337 (562)
Q Consensus 275 ~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~------~~l~~~~~~l~l~~--------~~~~~-~~-- 337 (562)
.++|+|++.+.||++.+++|+..+.++.|+++|+|+|+|+.. +.++++++++++.. .++.+ .+
T Consensus 186 ~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~ 265 (413)
T 3oy2_A 186 LFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDE 265 (413)
T ss_dssp EEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHH
T ss_pred EEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHH
Confidence 999999999999999999999999999999999999998765 88899999998874 33455 33
Q ss_pred ChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCc---------------eE--ee--CCHHH
Q 008544 338 HADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPN---------------CR--TY--DGRNG 397 (562)
Q Consensus 338 ~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~---------------g~--~~--~d~~~ 397 (562)
++.++|+.||++|+||..|+||++++||||||+|||+|+.++ .|++.++.+ |+ ++ +|+++
T Consensus 266 ~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~ 345 (413)
T 3oy2_A 266 RVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDD 345 (413)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHH
T ss_pred HHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHH
Confidence 456999999999999999999999999999999999999998 999988887 77 76 49999
Q ss_pred HHHHHHHHHhCCCC--CccHHHH----hcCCHHHHHHHHHHHHHhcCcc
Q 008544 398 FVEATLKALAEEPA--QPTDAQT----HQLSWESATERFLQVAELVGDV 440 (562)
Q Consensus 398 la~~i~~ll~~~~~--~l~~~ar----~~~sw~~~~~~~~~~y~~~~~~ 440 (562)
++++| ++++|++. +|+++++ ++|+|+.+++++.++|+.....
T Consensus 346 la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 393 (413)
T 3oy2_A 346 LVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRV 393 (413)
T ss_dssp HHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC-
T ss_pred HHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 99999 99998876 7777776 6899999999999999988744
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=308.45 Aligned_cols=275 Identities=9% Similarity=0.065 Sum_probs=201.4
Q ss_pred CCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhc--hHHHHHHH--HHH--HHHHHHHhccEEEEc
Q 008544 160 EEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKN--DRLQAFLL--EFV--NSWLARVHCHKVIRL 232 (562)
Q Consensus 160 ~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~--~~~~~~~~--~~~--~~~~~~~~ad~vi~~ 232 (562)
.+|||||+|..... +. +..+++.++ |+|.++|+........... ..+...+. ..+ .....+ .||.||++
T Consensus 406 ~~PDVIHsH~~~sg-lv--a~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~-~AD~VIa~ 481 (816)
T 3s28_A 406 GKPDLIIGNYSDGN-LV--ASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMN-HTDFIITS 481 (816)
T ss_dssp SCCSEEEEEHHHHH-HH--HHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHH-HSSEEEES
T ss_pred CCCeEEEeCCchHH-HH--HHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHH-hCCEEEEC
Confidence 47999999864332 33 344555555 9999999764332111110 01111100 011 122233 38999999
Q ss_pred Chhhhcc--------CC---------------------CccccccccCCCCcCcchhhhH-------------------H
Q 008544 233 SAATQEY--------PN---------------------SIVCNVHGVNPKFLEIGEKKME-------------------Q 264 (562)
Q Consensus 233 S~~~~~~--------~~---------------------~~~~~v~GVd~~~~~~~~~~~~-------------------~ 264 (562)
|+..++. .. +..+..+|||.+.|.+...... +
T Consensus 482 S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r 561 (816)
T 3s28_A 482 TFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENK 561 (816)
T ss_dssp CHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBT
T ss_pred CHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHH
Confidence 9877651 11 2233346999988766442211 1
Q ss_pred hhcCC--CCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCC-----------CHHHHHHHHHhcCCe--
Q 008544 265 QQNGN--KAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGE-----------DFDQIQRAAKKLKLV-- 329 (562)
Q Consensus 265 ~~~~~--~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~-----------~~~~l~~~~~~l~l~-- 329 (562)
...+. +++.++|+|+||+.+.||++.+++|+.++.+..++++|+|+|+|+ ..+.+++.++++++.
T Consensus 562 ~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~ 641 (816)
T 3s28_A 562 EHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQ 641 (816)
T ss_dssp TEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBB
T ss_pred HHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCc
Confidence 12333 556889999999999999999999999998888899999999998 457888999999885
Q ss_pred eEEeCCCCC------hHHHHh-hcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHH
Q 008544 330 VRVYPGRDH------ADPIFH-DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFV 399 (562)
Q Consensus 330 ~~~~~~~~~------~~~l~~-~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la 399 (562)
+.+.|...+ ...+|. .+|+||+||..|+||++++||||||+|||+|+.|+ .|++.++.+|++++ |+++++
T Consensus 642 V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA 721 (816)
T 3s28_A 642 FRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAA 721 (816)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHH
T ss_pred EEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHH
Confidence 445564443 335566 57999999999999999999999999999999998 99999999999985 999999
Q ss_pred HHHHHHH----hCCCC--CccHHHH----hcCCHHHHHHHHHHHHHhcC
Q 008544 400 EATLKAL----AEEPA--QPTDAQT----HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 400 ~~i~~ll----~~~~~--~l~~~ar----~~~sw~~~~~~~~~~y~~~~ 438 (562)
++|.+++ .|+.. +|+++++ ++|||+.++++++++|+...
T Consensus 722 ~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g 770 (816)
T 3s28_A 722 DTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYG 770 (816)
T ss_dssp HHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 9997776 77775 7888777 78999999999999998664
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-33 Score=283.76 Aligned_cols=298 Identities=13% Similarity=-0.024 Sum_probs=230.5
Q ss_pred CCeEEEEecc-----------cCCC-cccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHH
Q 008544 49 QQHIAIFTTA-----------SLPW-LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAY 116 (562)
Q Consensus 49 ~~rI~ivt~~-----------~~P~-~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~ 116 (562)
+|||+++++. ++|. .+|.+.....++++|.++| |+|+++++..... ..+.
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G-~~v~v~~~~~~~~-----~~~~------------ 64 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELG-HEVFLLGAPGSPA-----GRPG------------ 64 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTT-CEEEEESCTTSCC-----CSTT------------
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcC-CeEEEEecCCCCC-----CCCc------------
Confidence 4899999998 4554 5788888999999999998 9999998732100 0000
Q ss_pred HHHHhhhccCCCCCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcC
Q 008544 117 VRWWLEDRTGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHT 195 (562)
Q Consensus 117 ~~~~~~~~~~~~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~ 195 (562)
.+... . +. ...+.+++++.+||+||++.+... ++ ..+..+ | |.++|+
T Consensus 65 ------~~~~~-----~---~~-----------~~~l~~~l~~~~~Dvi~~~~~~~~-~~-----~~~~~~~p-v~~~h~ 112 (342)
T 2iuy_A 65 ------LTVVP-----A---GE-----------PEEIERWLRTADVDVVHDHSGGVI-GP-----AGLPPGTA-FISSHH 112 (342)
T ss_dssp ------EEECS-----C---CS-----------HHHHHHHHHHCCCSEEEECSSSSS-CS-----TTCCTTCE-EEEEEC
T ss_pred ------ceecc-----C---Cc-----------HHHHHHHHHhcCCCEEEECCchhh-HH-----HHhhcCCC-EEEecC
Confidence 00000 0 00 114677788889999999987654 12 122223 7 999997
Q ss_pred CcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhccCCC--c-cccccccCCCCcCcchhhhHHhhcCCCCC
Q 008544 196 NYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYPNS--I-VCNVHGVNPKFLEIGEKKMEQQQNGNKAF 272 (562)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~--~-~~~v~GVd~~~~~~~~~~~~~~~~~~~~~ 272 (562)
.+.... .+|.++++|+..++...+ . .+..+|+|.+.+.+... . ..+
T Consensus 113 ~~~~~~-----------------------~~d~ii~~S~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~-------~-~~~ 161 (342)
T 2iuy_A 113 FTTRPV-----------------------NPVGCTYSSRAQRAHCGGGDDAPVIPIPVDPARYRSAAD-------Q-VAK 161 (342)
T ss_dssp SSSBCS-----------------------CCTTEEESCHHHHHHTTCCTTSCBCCCCBCGGGSCCSTT-------C-CCC
T ss_pred CCCCcc-----------------------cceEEEEcCHHHHHHHhcCCceEEEcCCCChhhcCcccc-------c-CCC
Confidence 754311 069999999999885442 2 23336888776654322 1 123
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCCh--HHHHhhcCEEE
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHA--DPIFHDYKVFL 350 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~--~~l~~~adv~v 350 (562)
.+.++|+|++.+.||++.+++++..+ +++|+++|+|++.+.+++++++++.++.+.+..++. .++|+.+|++|
T Consensus 162 ~~~i~~vG~~~~~Kg~~~li~a~~~~-----~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~v 236 (342)
T 2iuy_A 162 EDFLLFMGRVSPHKGALEAAAFAHAC-----GRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVL 236 (342)
T ss_dssp CSCEEEESCCCGGGTHHHHHHHHHHH-----TCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEE
T ss_pred CCEEEEEeccccccCHHHHHHHHHhc-----CcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCEEE
Confidence 56899999999999999999999876 799999999999999999998888667777777666 69999999999
Q ss_pred EccC----------CCCCcHHHHHHHHcCCcEEeeCCCC-cccccc--CCceEeeC-CHHHHHHHHHHHHhCCCCCccHH
Q 008544 351 NPST----------TDVVCTATAEALAMGKIVVCANHPS-NDFFKQ--FPNCRTYD-GRNGFVEATLKALAEEPAQPTDA 416 (562)
Q Consensus 351 ~pS~----------~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~--~~~g~~~~-d~~~la~~i~~ll~~~~~~l~~~ 416 (562)
+||. .|+||++++||||||+|||+++.++ .|++.+ +.+|++++ |+++++++|.++++ +++
T Consensus 237 ~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~~~d~~~l~~~i~~l~~------~~~ 310 (342)
T 2iuy_A 237 AMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDFAPDEARRTLAGLPA------SDE 310 (342)
T ss_dssp ECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSSCCCHHHHHHHHHTSCC------HHH
T ss_pred ECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEcCCCHHHHHHHHHHHHH------HHH
Confidence 9999 8999999999999999999999998 999999 89999988 99999999999887 444
Q ss_pred HH----hcCCHHHHHHHHHHHHHhcC
Q 008544 417 QT----HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 417 ar----~~~sw~~~~~~~~~~y~~~~ 438 (562)
++ ++|+|+.+++++.++|+...
T Consensus 311 ~~~~~~~~~s~~~~~~~~~~~~~~~~ 336 (342)
T 2iuy_A 311 VRRAAVRLWGHVTIAERYVEQYRRLL 336 (342)
T ss_dssp HHHHHHHHHBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 43 78999999999999999776
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=265.17 Aligned_cols=333 Identities=8% Similarity=0.025 Sum_probs=203.9
Q ss_pred ccCCeEEEEecccCCCc-ccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhcc
Q 008544 47 RKQQHIAIFTTASLPWL-TGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRT 125 (562)
Q Consensus 47 ~~~~rI~ivt~~~~P~~-~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~ 125 (562)
.++|||+++++.|.|.. .|+...+..++++|+++| |+|+|+++... + .. +. .........
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~G-heV~Vvt~~~~--------~--------~~-~~-~~~~~~~~~ 104 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKK-FKKRIILTDAT--------P--------NP-KD-LQSFKSFKY 104 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTT-CEEEEEESSCC--------C--------CH-HH-HGGGTTSEE
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcC-CceEEEEecCC--------C--------Ch-HH-HHhhhccce
Confidence 45699999999999863 344556889999999998 99999998321 1 00 00 000000000
Q ss_pred CCCCCcccccccccchhccchhhhHH-hHHhhcCcCCCcEEEecCCchhhhhhchHHHH----h----hcCCEEEEEcCC
Q 008544 126 GFTSTFDTRFYPGKFAADKKSILAVG-DITEIIPDEEADIAVLEEPEHLTWFHHGKRWK----A----KFRFVVGIVHTN 196 (562)
Q Consensus 126 ~~~~~~~i~~y~~r~~~~~~~~~~~~-~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~----~----~~~~vi~~~h~~ 196 (562)
...... ..+..+. ..+. .+...+...++|+||++...... . +..+. . ...+.+..+|+.
T Consensus 105 ~~~~~~--~~~~~~i-------~~~~~~~~~~~~~~~~Dvv~a~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~v~~~ 172 (413)
T 2x0d_A 105 VMPEED--KDFALQI-------VPFNDRYNRTIPVAKHDIFIATAWWTAY-A--AQRIVSWQSDTYGIPPNKILYIIQDF 172 (413)
T ss_dssp CCTTCC--CCCSEEE-------EECSCCTTCCEEECTTEEEEECSHHHHH-H--HHHHHHHHHHHHTCCCCCEEEEECSC
T ss_pred eeccCC--cccccee-------eeccccccccccCCCCCEEEEehHHHHH-H--HHHhhhhhhhhcccccCcEEEEEeec
Confidence 000000 0000000 0000 01122223579999988643321 1 11111 0 113677788865
Q ss_pred cHHHHhhhhchHHHHHHHHHHHHHHHHHhcc--EEEEcChhhhccCCC------cc-ccccccCCCCcCcchhhhHHhhc
Q 008544 197 YLEYVKREKNDRLQAFLLEFVNSWLARVHCH--KVIRLSAATQEYPNS------IV-CNVHGVNPKFLEIGEKKMEQQQN 267 (562)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad--~vi~~S~~~~~~~~~------~~-~~v~GVd~~~~~~~~~~~~~~~~ 267 (562)
.+.+. ..+. ...+.+...+. ++ .+|++|+..++...+ .. ...+|+|.+.+.+. ..
T Consensus 173 ~~~~~---~~~~-----~~~~~~~~~~~-~~~~~vi~~S~~~~~~l~~~g~~~~~~~~i~~g~d~~~~~~~-------~~ 236 (413)
T 2x0d_A 173 EPGFY---QWSS-----QYVLAESTYKY-RGPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYI-------ND 236 (413)
T ss_dssp GGGGS---CSSH-----HHHHHHHTTSC-CSCEEEEEESHHHHHHHHHHTCCCSEEEEECCCCCHHHHTTT-------TS
T ss_pred hhhcC---ccCh-----HHHHHHHHhcc-CCceEEEEcCHHHHHHHHHcCCCCCceEEeCCCcCchhhccc-------cc
Confidence 43321 1111 01112222222 33 689999888874321 11 12245554433221 11
Q ss_pred CCCCCccEEEEEeec-cccCCHHHHHHHHHHHHHhcCC---cEEEEEeCCCCHHHHHHHHHhcCC--eeEEeCCC--CCh
Q 008544 268 GNKAFTKGAYYIGRM-VWSKGYEELLGLLNIYHKELAG---LEMDLYGNGEDFDQIQRAAKKLKL--VVRVYPGR--DHA 339 (562)
Q Consensus 268 ~~~~~~~~il~vGr~-~~~Kg~~~ll~a~~~l~~~~~~---~~l~ivG~g~~~~~l~~~~~~l~l--~~~~~~~~--~~~ 339 (562)
..++.+.++++||+ .++||++.+++|+..+.++.|+ ++|+++|+|+.. .++++ ++++.|.. +++
T Consensus 237 -~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~-------~~l~~~~~v~f~G~~~~~~l 308 (413)
T 2x0d_A 237 -KRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD-------IALGKGIHLNSLGKLTLEDY 308 (413)
T ss_dssp -CCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC-------EEEETTEEEEEEESCCHHHH
T ss_pred -ccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh-------hhcCCcCcEEEcCCCCHHHH
Confidence 22335678899996 6899999999999999888775 899999998764 23343 35555554 455
Q ss_pred HHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCCccccccCCceEeeC--CHHHHHHHHHHHHhCCCCCccHHH
Q 008544 340 DPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYD--GRNGFVEATLKALAEEPAQPTDAQ 417 (562)
Q Consensus 340 ~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~~l~~~a 417 (562)
.++|+.||+||+||..|+||++++||||||+|||+++.|..|++.++.+|++++ |+++++++|.++++|++.... ++
T Consensus 309 ~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~~~~~-~~ 387 (413)
T 2x0d_A 309 ADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITNKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNNRDV-DK 387 (413)
T ss_dssp HHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEECBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC-------
T ss_pred HHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEeCCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHHHHHH-hH
Confidence 599999999999999999999999999999999997655589999999999874 999999999999999886333 44
Q ss_pred H---hcCCHHHHHHHHHHHHHh
Q 008544 418 T---HQLSWESATERFLQVAEL 436 (562)
Q Consensus 418 r---~~~sw~~~~~~~~~~y~~ 436 (562)
+ +.|+|+.+.++ .+.|+.
T Consensus 388 ~~~~~~~~W~~~~~~-~~~~~~ 408 (413)
T 2x0d_A 388 KESSNMMFYINEFNE-FSFIKE 408 (413)
T ss_dssp -CCBSCGGGCCCC----TTHHH
T ss_pred HHHHHhCCHHHHHHH-HHHHHH
Confidence 4 78999999877 455543
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-27 Score=242.80 Aligned_cols=330 Identities=13% Similarity=0.053 Sum_probs=215.3
Q ss_pred CCeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccC-CCceeCCchhhHHHHHHHhhhccCC
Q 008544 49 QQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYP-GNITFASPKEQEAYVRWWLEDRTGF 127 (562)
Q Consensus 49 ~~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p-~~i~~~~~~~~~~~~~~~~~~~~~~ 127 (562)
+|||++++.. .+|.......++++|.++| |+|+++++.... .....+ .++.+.. ...
T Consensus 6 ~mkIl~~~~~----~gG~~~~~~~la~~L~~~G-~~V~v~~~~~~~--~~~~~~~~g~~~~~---------------~~~ 63 (364)
T 1f0k_A 6 GKRLMVMAGG----TGGHVFPGLAVAHHLMAQG-WQVRWLGTADRM--EADLVPKHGIEIDF---------------IRI 63 (364)
T ss_dssp -CEEEEECCS----SHHHHHHHHHHHHHHHTTT-CEEEEEECTTST--HHHHGGGGTCEEEE---------------CCC
T ss_pred CcEEEEEeCC----CccchhHHHHHHHHHHHcC-CEEEEEecCCcc--hhhhccccCCceEE---------------ecC
Confidence 3899999732 3565666778999999998 999999873210 000000 0111000 000
Q ss_pred CCCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhc
Q 008544 128 TSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKN 206 (562)
Q Consensus 128 ~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~ 206 (562)
..+........+............+.+.+++.+||+||++.+... +. +...++..+ |++.+.|+.+...
T Consensus 64 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~-~~--~~~~~~~~~~p~v~~~~~~~~~~------ 133 (364)
T 1f0k_A 64 -SGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVS-GP--GGLAAWSLGIPVVLHEQNGIAGL------ 133 (364)
T ss_dssp -CCCTTCCHHHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTH-HH--HHHHHHHTTCCEEEEECSSSCCH------
T ss_pred -CccCcCccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCc-hH--HHHHHHHcCCCEEEEecCCCCcH------
Confidence 000000000000000111112445777788889999999976533 11 222333334 8888888654221
Q ss_pred hHHHHHHHHHHHHHHHHHhccEEEEcChhhhccCCCccccccccCCCCcCcchhhhHHhhcCCCCCccEE-EEEeecccc
Q 008544 207 DRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGA-YYIGRMVWS 285 (562)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~i-l~vGr~~~~ 285 (562)
..+++.+. +|.+++.++.. ++ +.....+|++..++.+.. .+...+.+++.+.+ ++.|++.+.
T Consensus 134 ----------~~~~~~~~-~d~v~~~~~~~--~~-~~~~i~n~v~~~~~~~~~---~~~~~~~~~~~~~il~~~g~~~~~ 196 (364)
T 1f0k_A 134 ----------TNKWLAKI-ATKVMQAFPGA--FP-NAEVVGNPVRTDVLALPL---PQQRLAGREGPVRVLVVGGSQGAR 196 (364)
T ss_dssp ----------HHHHHTTT-CSEEEESSTTS--SS-SCEECCCCCCHHHHTSCC---HHHHHTTCCSSEEEEEECTTTCCH
T ss_pred ----------HHHHHHHh-CCEEEecChhh--cC-CceEeCCccchhhcccch---hhhhcccCCCCcEEEEEcCchHhH
Confidence 12233443 89999988664 33 222333577766554321 12234444445544 455689999
Q ss_pred CCHHHHHHHHHHHHHhcCCcE-EEEEeCCCCHHHHHHHHHhcCC-eeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHH
Q 008544 286 KGYEELLGLLNIYHKELAGLE-MDLYGNGEDFDQIQRAAKKLKL-VVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATA 363 (562)
Q Consensus 286 Kg~~~ll~a~~~l~~~~~~~~-l~ivG~g~~~~~l~~~~~~l~l-~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~l 363 (562)
||.+.+++++..+.+ +++ ++++|+|+ .+++++.++++++ ++.+.+..++..++|+.||++|+||. |++++
T Consensus 197 k~~~~li~a~~~l~~---~~~~l~i~G~~~-~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~sg----~~~~~ 268 (364)
T 1f0k_A 197 ILNQTMPQVAAKLGD---SVTIWHQSGKGS-QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSG----ALTVS 268 (364)
T ss_dssp HHHHHHHHHHHHHGG---GEEEEEECCTTC-HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEECCC----HHHHH
T ss_pred HHHHHHHHHHHHhcC---CcEEEEEcCCch-HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCEEEECCc----hHHHH
Confidence 999999999998864 678 56788877 5788888888875 57777778888999999999999983 99999
Q ss_pred HHHHcCCcEEeeCCCC-c--------cccccCCceEeeC--C--HHHHHHHHHHHHhCCCC--CccHHHH---hcCCHHH
Q 008544 364 EALAMGKIVVCANHPS-N--------DFFKQFPNCRTYD--G--RNGFVEATLKALAEEPA--QPTDAQT---HQLSWES 425 (562)
Q Consensus 364 EAma~G~PVI~t~~~~-~--------e~v~~~~~g~~~~--d--~~~la~~i~~ll~~~~~--~l~~~ar---~~~sw~~ 425 (562)
|||+||+|||+++.++ . +++.++ .|++++ | +++++++|.++ |++. +|+++++ +.|+|+.
T Consensus 269 EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~~~~~~~~ 345 (364)
T 1f0k_A 269 EIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDATER 345 (364)
T ss_dssp HHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCCTTHHHH
T ss_pred HHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhhccCHHHH
Confidence 9999999999999986 3 344444 598874 5 89999999998 5554 7887777 7899999
Q ss_pred HHHHHHHHHHhcC
Q 008544 426 ATERFLQVAELVG 438 (562)
Q Consensus 426 ~~~~~~~~y~~~~ 438 (562)
+++++++.|+...
T Consensus 346 ~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 346 VANEVSRVARALE 358 (364)
T ss_dssp HHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998654
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.8e-27 Score=257.49 Aligned_cols=325 Identities=11% Similarity=0.010 Sum_probs=222.9
Q ss_pred ccCCeEEEEecccCCCcccccccHHHHHHH--HHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhc
Q 008544 47 RKQQHIAIFTTASLPWLTGTAVNPLFRAAY--LAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDR 124 (562)
Q Consensus 47 ~~~~rI~ivt~~~~P~~~G~a~~~~~la~~--L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~ 124 (562)
.+++||+++++.+.+ +|++..+..+++. |.+.| |+|+++++... .. . .. ...++..
T Consensus 203 ~~~~rI~~~~~~~~~--~g~~~~~~~l~~~L~~~~~~-~~v~~~~~~~~---------~~----~-~~-~~~~~~~---- 260 (568)
T 2vsy_A 203 KGPLRVGFVSNGFGA--HPTGLLTVALFEALQRRQPD-LQMHLFATSGD---------DG----S-TL-RTRLAQA---- 260 (568)
T ss_dssp SSCEEEEEEESCSSS--SHHHHHHHHHHHHHHHHCTT-EEEEEEESSCC---------CS----C-HH-HHHHHHT----
T ss_pred CCCeEEEEECccccc--ChHHHHHHHHHhhccCCccc-EEEEEEECCCC---------Cc----c-HH-HHHHHhc----
Confidence 345899999988754 5667778888999 66676 99999986210 00 0 11 0111111
Q ss_pred cCCCCCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhh
Q 008544 125 TGFTSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKRE 204 (562)
Q Consensus 125 ~~~~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~ 204 (562)
..+ ..+ .. .....+.+.+++.+|||||.+........ ...+..+..|++.++|..... .
T Consensus 261 ~~~---~~~---~~---------~~~~~l~~~i~~~~~Div~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~--- 319 (568)
T 2vsy_A 261 STL---HDV---TA---------LGHLATAKHIRHHGIDLLFDLRGWGGGGR--PEVFALRPAPVQVNWLAYPGT-S--- 319 (568)
T ss_dssp SEE---EEC---TT---------CCHHHHHHHHHHTTCSEEEECSSCTTCSS--CHHHHTCCSSEEEEESSSSSC-C---
T ss_pred CeE---EEC---CC---------CCHHHHHHHHHhCCCCEEEECCCCCCcch--HHHHhcCCCceeEeeecCCcc-c---
Confidence 000 000 00 11345778888899999998654332111 122444445887777743110 0
Q ss_pred hchHHHHHHHHHHHHHHHHHhccEEEEcChhhhccCCCccccc-cccCCCCcC-cchhhhHHhhcCCCCCccEEEEEeec
Q 008544 205 KNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYPNSIVCNV-HGVNPKFLE-IGEKKMEQQQNGNKAFTKGAYYIGRM 282 (562)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~v-~GVd~~~~~-~~~~~~~~~~~~~~~~~~~il~vGr~ 282 (562)
.. ..+....+|.++++|+..+++.. .+..+ +.+.+.... .......+...+++++ .+++++|++
T Consensus 320 ~~------------~~~~~~~~d~~i~~s~~~~~~~~-~i~~ipn~~~~~~~~~~~~~~~~r~~~~~~~~-~~v~~~g~~ 385 (568)
T 2vsy_A 320 GA------------PWMDYVLGDAFALPPALEPFYSE-HVLRLQGAFQPSDTSRVVAEPPSRTQCGLPEQ-GVVLCCFNN 385 (568)
T ss_dssp CC------------TTCCEEEECTTTSCTTTGGGCSS-EEEECSSCSCCCCTTCCCCCCCCTGGGTCCTT-SCEEEECCC
T ss_pred CC------------CCceEEEECCCcCCcccccCCcc-eeEcCCCcCCCCCCCCCCCCCCCccccCCCCC-CEEEEeCCc
Confidence 00 00111137888999988877653 33222 222221110 0011122344556553 456799999
Q ss_pred cccCCHHHHHHHHHHHHHhcCCcEEEEEe-CCCCHHHHHHHHHhcCCe---eEEeCCCC--ChHHHHhhcCEEEEccCCC
Q 008544 283 VWSKGYEELLGLLNIYHKELAGLEMDLYG-NGEDFDQIQRAAKKLKLV---VRVYPGRD--HADPIFHDYKVFLNPSTTD 356 (562)
Q Consensus 283 ~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG-~g~~~~~l~~~~~~l~l~---~~~~~~~~--~~~~l~~~adv~v~pS~~E 356 (562)
.+ ||++.+++++.++.++.|+++|+|+| +|+..+.+++.++++++. +.|.|..+ +..++|+.+|+||+||.+
T Consensus 386 ~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~- 463 (568)
T 2vsy_A 386 SY-KLNPQSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPY- 463 (568)
T ss_dssp GG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSS-
T ss_pred cc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCC-
Confidence 99 99999999999998889999999999 888889999999999875 55666664 566999999999999999
Q ss_pred CCcHHHHHHHHcCCcEEe-------eCCC-------C-ccccccCCceEeeCCHHHHHHHHHHHHhCCCC--CccHHHH-
Q 008544 357 VVCTATAEALAMGKIVVC-------ANHP-------S-NDFFKQFPNCRTYDGRNGFVEATLKALAEEPA--QPTDAQT- 418 (562)
Q Consensus 357 ~~~~~~lEAma~G~PVI~-------t~~~-------~-~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~--~l~~~ar- 418 (562)
++|++++|||+||+|||+ |+.+ + .|++.+ |+++++++|.++++|++. .|+++++
T Consensus 464 ~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~--------~~~~la~~i~~l~~~~~~~~~~~~~~~~ 535 (568)
T 2vsy_A 464 NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA--------DDAAFVAKAVALASDPAALTALHARVDV 535 (568)
T ss_dssp CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS--------SHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC--------CHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 999999999999999999 9888 6 666643 999999999999999875 7777665
Q ss_pred -----hcCCHHHHHHHHHHHHHhcC
Q 008544 419 -----HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 419 -----~~~sw~~~~~~~~~~y~~~~ 438 (562)
+.|+|+.+++++.++|+...
T Consensus 536 ~~~~~~~f~~~~~~~~~~~~y~~~~ 560 (568)
T 2vsy_A 536 LRRASGVFHMDGFADDFGALLQALA 560 (568)
T ss_dssp HHHHSSTTCHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCCCHHHHHHHHHHHHHHHH
Confidence 46999999999999998765
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=243.78 Aligned_cols=241 Identities=17% Similarity=0.176 Sum_probs=169.5
Q ss_pred CCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcH-HHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhc
Q 008544 161 EADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYL-EYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQE 238 (562)
Q Consensus 161 ~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~ 238 (562)
++|+||....... .+ ..+++..+ |++.++|+... .... .. ...+.+.+...+. +|.++++|+..++
T Consensus 124 ~~DvIh~~~~~~~-~~---~~~~~~~~~p~v~~~h~~~~~~~~~---~~----~~~~~~~~~~~~~-ad~vi~~S~~~~~ 191 (406)
T 2hy7_A 124 ESDVIVFESGIAV-AF---IELAKRVNPAAKLVYRASDGLSTIN---VA----SYIEREFDRVAPT-LDVIALVSPAMAA 191 (406)
T ss_dssp HCSEEEEESSGGG-GG---HHHHHHHCTTSEEEEEESSCHHHHT---CC----HHHHHHHHHHGGG-CSEEEESCGGGGG
T ss_pred CCCEEEECCchHH-HH---HHHHHHhCCCEEEEEeccchhhccc---cc----HHHHHHHHHHHHh-CCEEEEcCHHHHH
Confidence 5899994332211 11 12334434 88888996532 1111 11 1122222333333 7999999999988
Q ss_pred cCCC--cc-ccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCC
Q 008544 239 YPNS--IV-CNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGED 315 (562)
Q Consensus 239 ~~~~--~~-~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~ 315 (562)
...+ .+ +..||+|.+.|.+.... ..+..++++|+|++.+.||+ +..+.+..|+++|+|+|+|+
T Consensus 192 ~~~~~~~i~vipngvd~~~f~~~~~~-------~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~l~ivG~g~- 257 (406)
T 2hy7_A 192 EVVSRDNVFHVGHGVDHNLDQLGDPS-------PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVTFHVIGSGM- 257 (406)
T ss_dssp GCSCSTTEEECCCCBCTTHHHHHCSC-------SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEEEEEESCSS-
T ss_pred HHHhcCCEEEEcCCcChHhcCccccc-------ccCCCcEEEEEeccccccCH------HHHHHHhCCCeEEEEEeCch-
Confidence 5543 22 33368887766432111 11223789999999999999 44445567899999999987
Q ss_pred HHHHHHHHHhcCC--eeEEeCCCC--ChHHHHhhcCEEEEccCCCCCcHHHHHHH-------HcCCcEEeeCCCCccccc
Q 008544 316 FDQIQRAAKKLKL--VVRVYPGRD--HADPIFHDYKVFLNPSTTDVVCTATAEAL-------AMGKIVVCANHPSNDFFK 384 (562)
Q Consensus 316 ~~~l~~~~~~l~l--~~~~~~~~~--~~~~l~~~adv~v~pS~~E~~~~~~lEAm-------a~G~PVI~t~~~~~e~v~ 384 (562)
++++++ ++.+.|..+ ++.++|+.||++|+||..|+||++++||| |||+|||+|+. +.
T Consensus 258 -------~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~-----v~ 325 (406)
T 2hy7_A 258 -------GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA-----VV 325 (406)
T ss_dssp -------CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG-----GT
T ss_pred -------HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh-----cc
Confidence 344444 366666654 45599999999999999999999999999 99999999988 67
Q ss_pred cCCceEe-e--CCHHHHHHHHHHHHhCCCCCccHHHHhcCCHHHHHHHHHHH--HHhcCccccc
Q 008544 385 QFPNCRT-Y--DGRNGFVEATLKALAEEPAQPTDAQTHQLSWESATERFLQV--AELVGDVVTK 443 (562)
Q Consensus 385 ~~~~g~~-~--~d~~~la~~i~~ll~~~~~~l~~~ar~~~sw~~~~~~~~~~--y~~~~~~~~~ 443 (562)
++.+|++ + +|+++|+++|.++++|+.. ...++|+|+.++++++++ |+.....+..
T Consensus 326 ~~~~G~l~v~~~d~~~la~ai~~ll~~~~~----~~~~~~sw~~~a~~~~~~~~y~~~~~~~~~ 385 (406)
T 2hy7_A 326 GPYKSRFGYTPGNADSVIAAITQALEAPRV----RYRQCLNWSDTTDRVLDPRAYPETRLYPHP 385 (406)
T ss_dssp CSCSSEEEECTTCHHHHHHHHHHHHHCCCC----CCSCCCBHHHHHHHHHCGGGSGGGBSSCCC
T ss_pred cCcceEEEeCCCCHHHHHHHHHHHHhCcch----hhhhcCCHHHHHHHHHHhhcccccCcCCCC
Confidence 7788888 6 4999999999999999872 123789999999999999 9887755443
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=230.97 Aligned_cols=266 Identities=9% Similarity=0.006 Sum_probs=174.9
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccE
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHK 228 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 228 (562)
...+.+++++.+||+||+|++....+. +...++..+ |++.+.|... .+... ..+.. ......+.+ .+|.
T Consensus 84 ~~~l~~~l~~~~pDvv~~~~~~~~~~~--~~~~~~~~~ip~v~~~~~~~-~~~~~---~~~~~---~~~~~~~~~-~~d~ 153 (375)
T 3beo_A 84 LEGLDKVMKEAKPDIVLVHGDTTTTFI--ASLAAFYNQIPVGHVEAGLR-TWDKY---SPYPE---EMNRQLTGV-MADL 153 (375)
T ss_dssp HHHHHHHHHHHCCSEEEEETTSHHHHH--HHHHHHHTTCCEEEESCCCC-CSCTT---SSTTH---HHHHHHHHH-HCSE
T ss_pred HHHHHHHHHHhCCCEEEEeCCchHHHH--HHHHHHHHCCCEEEEecccc-ccccc---CCChh---HhhhhHHhh-hhhe
Confidence 345777888899999999876444333 223344444 7876666431 11100 00000 111222333 3899
Q ss_pred EEEcChhhhccC------CCccccc-cc-cCCCCcCcch--hhhHHhhcCCCCCccEEEEEeecccc-CCHHHHHHHHHH
Q 008544 229 VIRLSAATQEYP------NSIVCNV-HG-VNPKFLEIGE--KKMEQQQNGNKAFTKGAYYIGRMVWS-KGYEELLGLLNI 297 (562)
Q Consensus 229 vi~~S~~~~~~~------~~~~~~v-~G-Vd~~~~~~~~--~~~~~~~~~~~~~~~~il~vGr~~~~-Kg~~~ll~a~~~ 297 (562)
++++|+..++.. .+.+..+ +| +|...+.+.. ....+... +++..+++++|++.+. ||++.+++|+.+
T Consensus 154 ii~~s~~~~~~~~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~--~~~~~vl~~~gr~~~~~K~~~~li~a~~~ 231 (375)
T 3beo_A 154 HFSPTAKSATNLQKENKDESRIFITGNTAIDALKTTVKETYSHPVLEKL--GNNRLVLMTAHRRENLGEPMRNMFRAIKR 231 (375)
T ss_dssp EEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT--TTSEEEEEECCCGGGTTHHHHHHHHHHHH
T ss_pred eeCCCHHHHHHHHHcCCCcccEEEECChhHhhhhhhhhhhhhHHHHHhc--cCCCeEEEEecccccchhHHHHHHHHHHH
Confidence 999998887732 2222222 45 5543332211 11112111 2334567799999875 999999999999
Q ss_pred HHHhcCCcEEEEEeCCCCHHHHHHHHHhc-C--CeeEEeCC--CCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcE
Q 008544 298 YHKELAGLEMDLYGNGEDFDQIQRAAKKL-K--LVVRVYPG--RDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIV 372 (562)
Q Consensus 298 l~~~~~~~~l~ivG~g~~~~~l~~~~~~l-~--l~~~~~~~--~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PV 372 (562)
+.++.|++++++ |.|++. .+++.++++ + .++.+.+. ..+..++|+.||++|+|| |.+++|||+||+||
T Consensus 232 l~~~~~~~~~i~-~~g~~~-~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pv 304 (375)
T 3beo_A 232 LVDKHEDVQVVY-PVHMNP-VVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPV 304 (375)
T ss_dssp HHHHCTTEEEEE-ECCSCH-HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCE
T ss_pred HHhhCCCeEEEE-eCCCCH-HHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcCCCE
Confidence 988888999654 666653 333333332 2 24666543 336669999999999999 67799999999999
Q ss_pred EeeCC-CC-ccccccCCceEee-CCHHHHHHHHHHHHhCCCC--CccHHHH---hcCCHHHHHHHHHHHHH
Q 008544 373 VCANH-PS-NDFFKQFPNCRTY-DGRNGFVEATLKALAEEPA--QPTDAQT---HQLSWESATERFLQVAE 435 (562)
Q Consensus 373 I~t~~-~~-~e~v~~~~~g~~~-~d~~~la~~i~~ll~~~~~--~l~~~ar---~~~sw~~~~~~~~~~y~ 435 (562)
|+++. ++ .|++.++ +|+++ .|+++++++|.++++|++. +|+++++ +.++|+.+++.+.+.++
T Consensus 305 i~~~~~~~~~e~v~~g-~g~~v~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 305 LVLRDTTERPEGIEAG-TLKLAGTDEETIFSLADELLSDKEAHDKMSKASNPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp EECSSCCSCHHHHHTT-SEEECCSCHHHHHHHHHHHHHCHHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred EEecCCCCCceeecCC-ceEEcCCCHHHHHHHHHHHHhChHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence 99965 66 8888877 89988 5999999999999998764 5665555 67999999999988764
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-24 Score=195.66 Aligned_cols=155 Identities=14% Similarity=0.118 Sum_probs=128.3
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCC--CChHHHHhhcCEEE
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGR--DHADPIFHDYKVFL 350 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~--~~~~~l~~~adv~v 350 (562)
.++++|+|++.++||++.+++++..+. +.|+++|+++|.|++.+.+++.++++++++.+ +.. ++..++|+.+|++|
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~-~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v 79 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSK-YKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYV 79 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCT-TGGGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhc-cCCCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEE
Confidence 467999999999999999999999984 45799999999999999999999999986666 443 34559999999999
Q ss_pred EccCCCCCcHHHHHHHHcCC-cEEee-CCCC-ccccccCCceEeeCCHHHHHHHHHHHHhCCCC--CccHHHH---hcCC
Q 008544 351 NPSTTDVVCTATAEALAMGK-IVVCA-NHPS-NDFFKQFPNCRTYDGRNGFVEATLKALAEEPA--QPTDAQT---HQLS 422 (562)
Q Consensus 351 ~pS~~E~~~~~~lEAma~G~-PVI~t-~~~~-~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~--~l~~~ar---~~~s 422 (562)
+||..|+||++++|||+||+ |||++ +.++ .+++.++.+.+..+|+++++++|.+++++++. .|+++++ ++|+
T Consensus 80 ~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s 159 (166)
T 3qhp_A 80 HAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYT 159 (166)
T ss_dssp ECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGGEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC
T ss_pred ECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCceEEcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999998 99995 5566 88888877755556999999999999998875 7777776 7899
Q ss_pred HHHHHHH
Q 008544 423 WESATER 429 (562)
Q Consensus 423 w~~~~~~ 429 (562)
|+.++++
T Consensus 160 ~~~~~~~ 166 (166)
T 3qhp_A 160 LENSVIQ 166 (166)
T ss_dssp -------
T ss_pred hhhhhcC
Confidence 9988764
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.90 E-value=9.3e-24 Score=198.94 Aligned_cols=169 Identities=19% Similarity=0.212 Sum_probs=145.9
Q ss_pred ccccCCCCcC--cch------hhhHHhhcCCCCCccEEEEEeecc-ccCCHHHHHHHHHHHH--HhcCCcEEEEEeCCC-
Q 008544 247 VHGVNPKFLE--IGE------KKMEQQQNGNKAFTKGAYYIGRMV-WSKGYEELLGLLNIYH--KELAGLEMDLYGNGE- 314 (562)
Q Consensus 247 v~GVd~~~~~--~~~------~~~~~~~~~~~~~~~~il~vGr~~-~~Kg~~~ll~a~~~l~--~~~~~~~l~ivG~g~- 314 (562)
.+|||.+.|. +.. ....+...++++ .++++|+|++. +.||++.+++++..+. ++.|+++|+++|.++
T Consensus 3 pngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~-~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~ 81 (200)
T 2bfw_A 3 HNGIDCSFWNESYLTGSRDERKKSLLSKFGMDE-GVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP 81 (200)
T ss_dssp --CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCS-CEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCH
T ss_pred CCccChhhccccccccchhhHHHHHHHHcCCCC-CCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCCCh
Confidence 4699998887 665 444566677665 55999999999 9999999999999997 777899999999998
Q ss_pred -CHHHHHHHHHhcCCeeEE-eCCCC--ChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCce
Q 008544 315 -DFDQIQRAAKKLKLVVRV-YPGRD--HADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNC 389 (562)
Q Consensus 315 -~~~~l~~~~~~l~l~~~~-~~~~~--~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g 389 (562)
..+.+++.+++++ ++++ ++..+ ++.++|+.||++|+||..|++|++++|||+||+|||+++.++ .+++ ++.+|
T Consensus 82 ~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g 159 (200)
T 2bfw_A 82 ELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDII-TNETG 159 (200)
T ss_dssp HHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC-CTTTC
T ss_pred HHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCChHHHc-CCCce
Confidence 7888999999888 7888 77766 666999999999999999999999999999999999999987 8888 88999
Q ss_pred EeeC--CHHHHHHHHHHHHh-CCCC--CccHHHH
Q 008544 390 RTYD--GRNGFVEATLKALA-EEPA--QPTDAQT 418 (562)
Q Consensus 390 ~~~~--d~~~la~~i~~ll~-~~~~--~l~~~ar 418 (562)
++++ |+++++++|.++++ |+.. +|+++++
T Consensus 160 ~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~ 193 (200)
T 2bfw_A 160 ILVKAGDPGELANAILKALELSRSDLSKFRENCK 193 (200)
T ss_dssp EEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 9985 99999999999999 8765 6666655
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-24 Score=225.06 Aligned_cols=271 Identities=11% Similarity=-0.008 Sum_probs=178.1
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHH-HHHHHhcc
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNS-WLARVHCH 227 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ad 227 (562)
...+.+++++.+||+||+++.....+. +...++..+ |++.+.|+... +... . . +.....+ ++.+ .+|
T Consensus 75 ~~~l~~~l~~~~pDvv~~~~~~~~~~~--~~~~a~~~~ip~v~~~~~~~~-~~~~--~-~----~~~~~~~~~~~~-~~d 143 (384)
T 1vgv_A 75 LEGLKPILAEFKPDVVLVHGDTTTTLA--TSLAAFYQRIPVGHVEAGLRT-GDLY--S-P----WPEEANRTLTGH-LAM 143 (384)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCHHHHH--HHHHHHTTTCCEEEESCCCCC-SCTT--S-S----TTHHHHHHHHHT-TCS
T ss_pred HHHHHHHHHHhCCCEEEEeCCchHHHH--HHHHHHHHCCCEEEEeccccc-cccc--C-C----CchHhhHHHHHh-hcc
Confidence 455778888899999999976333333 223344434 88877775421 1100 0 0 0011112 2233 389
Q ss_pred EEEEcChhhhccCC------Cccccc-ccc-CCCCcCcch-------hhhHHhhcC-CCC-CccEEEEEeecccc-CCHH
Q 008544 228 KVIRLSAATQEYPN------SIVCNV-HGV-NPKFLEIGE-------KKMEQQQNG-NKA-FTKGAYYIGRMVWS-KGYE 289 (562)
Q Consensus 228 ~vi~~S~~~~~~~~------~~~~~v-~GV-d~~~~~~~~-------~~~~~~~~~-~~~-~~~~il~vGr~~~~-Kg~~ 289 (562)
.++++|+..++... +.+..+ +|+ |...+.+.. ....+...+ +++ ...+++++||+.+. ||++
T Consensus 144 ~ii~~s~~~~~~l~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~ 223 (384)
T 1vgv_A 144 YHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFE 223 (384)
T ss_dssp EEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHH
T ss_pred EEEcCcHHHHHHHHHcCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccccchHHH
Confidence 99999988877321 122222 342 221111110 001123334 433 34567899999876 9999
Q ss_pred HHHHHHHHHHHhcCCcEEEEE-eCCC-CHHHHHHHHHhcCCeeEEeC--CCCChHHHHhhcCEEEEccCCCCCcHHHHHH
Q 008544 290 ELLGLLNIYHKELAGLEMDLY-GNGE-DFDQIQRAAKKLKLVVRVYP--GRDHADPIFHDYKVFLNPSTTDVVCTATAEA 365 (562)
Q Consensus 290 ~ll~a~~~l~~~~~~~~l~iv-G~g~-~~~~l~~~~~~l~l~~~~~~--~~~~~~~l~~~adv~v~pS~~E~~~~~~lEA 365 (562)
.+++|+.++.++.|++++++. |.++ ..+.+++.+... .++.+.+ ++.+..++|+.||++|+|| |..++||
T Consensus 224 ~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~v~~S-----g~~~lEA 297 (384)
T 1vgv_A 224 EICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHV-KNVILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEA 297 (384)
T ss_dssp HHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTC-TTEEEECCCCHHHHHHHHHHCSEEEESS-----STGGGTG
T ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcC-CCEEEeCCCCHHHHHHHHHhCcEEEECC-----cchHHHH
Confidence 999999999888889999886 4332 245555554322 2466643 3456779999999999999 3348999
Q ss_pred HHcCCcEEeeCC-CC-ccccccCCceEeeC-CHHHHHHHHHHHHhCCCC--CccHHHH---hcCCHHHHHHHHHHHHHhc
Q 008544 366 LAMGKIVVCANH-PS-NDFFKQFPNCRTYD-GRNGFVEATLKALAEEPA--QPTDAQT---HQLSWESATERFLQVAELV 437 (562)
Q Consensus 366 ma~G~PVI~t~~-~~-~e~v~~~~~g~~~~-d~~~la~~i~~ll~~~~~--~l~~~ar---~~~sw~~~~~~~~~~y~~~ 437 (562)
|+||+|||+++. ++ .|++.++ +|++++ |+++++++|.++++|++. +|+++++ ..++|+.+++.+.+.|++.
T Consensus 298 ~a~G~PvI~~~~~~~~~e~v~~g-~g~lv~~d~~~la~~i~~ll~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 376 (384)
T 1vgv_A 298 PSLGKPVLVMRDTTERPEAVTAG-TVRLVGTDKQRIVEEVTRLLKDENEYQAMSRAHNPYGDGQACSRILEALKNNRISL 376 (384)
T ss_dssp GGGTCCEEEESSCCSCHHHHHHT-SEEEECSSHHHHHHHHHHHHHCHHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCCCC
T ss_pred HHcCCCEEEccCCCCcchhhhCC-ceEEeCCCHHHHHHHHHHHHhChHHHhhhhhccCCCcCCCHHHHHHHHHHHHHHhh
Confidence 999999999987 66 7888877 999884 999999999999998864 5665554 6799999999999888766
Q ss_pred C
Q 008544 438 G 438 (562)
Q Consensus 438 ~ 438 (562)
.
T Consensus 377 ~ 377 (384)
T 1vgv_A 377 G 377 (384)
T ss_dssp -
T ss_pred c
Confidence 5
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-23 Score=221.78 Aligned_cols=185 Identities=14% Similarity=0.107 Sum_probs=141.4
Q ss_pred cccCCCCcCcch-------hhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCC----cEEEEEeCC---
Q 008544 248 HGVNPKFLEIGE-------KKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAG----LEMDLYGNG--- 313 (562)
Q Consensus 248 ~GVd~~~~~~~~-------~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~----~~l~ivG~g--- 313 (562)
+|||++.|.+.. ....+...+ +.++|+++||+.+.||++.+++|++++.+++|+ ++|+++|.+
T Consensus 226 ~GID~~~f~~~~~~~~~~~~~~lr~~~~---~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~ 302 (482)
T 1uqt_A 226 IGIEPKEIAKQAAGPLPPKLAQLKAELK---NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG 302 (482)
T ss_dssp CCCCHHHHHHHHHSCCCHHHHHHHHHTT---TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCST
T ss_pred ccCCHHHHHHHhcCcchHHHHHHHHHhC---CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCcc
Confidence 588887664321 112233333 478999999999999999999999999888775 689999963
Q ss_pred --CC----HHHHHHHHHhcCC--------eeEEeCC---CCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCC-----c
Q 008544 314 --ED----FDQIQRAAKKLKL--------VVRVYPG---RDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGK-----I 371 (562)
Q Consensus 314 --~~----~~~l~~~~~~l~l--------~~~~~~~---~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~-----P 371 (562)
++ .+++++++.+++. .+.++++ .+++.++|+.||+||+||..||||++++||||||+ |
T Consensus 303 ~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gp 382 (482)
T 1uqt_A 303 DVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGV 382 (482)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCE
T ss_pred chHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCC
Confidence 21 2344555544331 2566655 33444899999999999999999999999999997 9
Q ss_pred EEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC---CccHHHH---hcCCHHHHHHHHHHHHHhcC
Q 008544 372 VVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA---QPTDAQT---HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 372 VI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~---~l~~~ar---~~~sw~~~~~~~~~~y~~~~ 438 (562)
||+|+.+| .+.+. +|++++ |+++++++|.+++++++. .+.++++ .+|+|+..++++++.|+.+.
T Consensus 383 vV~S~~~G~~~~l~---~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~~ 455 (482)
T 1uqt_A 383 LVLSQFAGAANELT---SALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (482)
T ss_dssp EEEETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred EEEECCCCCHHHhC---CeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhcC
Confidence 99998765 66662 778875 999999999999997653 5555555 67999999999999998873
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-22 Score=214.27 Aligned_cols=277 Identities=14% Similarity=0.088 Sum_probs=173.7
Q ss_pred CcCCCcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCc-HHH----------HhhhhchH-HHHH---H--HHHHH
Q 008544 158 PDEEADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNY-LEY----------VKREKNDR-LQAF---L--LEFVN 218 (562)
Q Consensus 158 ~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~-~~~----------~~~~~~~~-~~~~---~--~~~~~ 218 (562)
...+|||+|+|........ ..++.... +.|+++|... -.+ ......+. ..+. + ...+.
T Consensus 178 ~~~~pdIiH~HDW~tg~~~---~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~E 254 (725)
T 3nb0_A 178 DSQHAIVAHFHEWLAGVAL---PLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIE 254 (725)
T ss_dssp CCSEEEEEEEESGGGCTHH---HHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCcEEEeCchhhhHHH---HHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHH
Confidence 3466999999997665221 22333332 7999999662 111 00000000 0000 0 11112
Q ss_pred HHHHHHhccEEEEcChhhhc----c---CCCccccccccCCCCcCcchh-----hhHHhh------------cCCCCCc-
Q 008544 219 SWLARVHCHKVIRLSAATQE----Y---PNSIVCNVHGVNPKFLEIGEK-----KMEQQQ------------NGNKAFT- 273 (562)
Q Consensus 219 ~~~~~~~ad~vi~~S~~~~~----~---~~~~~~~v~GVd~~~~~~~~~-----~~~~~~------------~~~~~~~- 273 (562)
+.... +||+|+|+|+.+++ + ....+ .+||||.+.|+|... ...+.+ .+++.++
T Consensus 255 Kaga~-~AD~ITTVS~~yA~Ei~~Ll~r~~d~i-IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~ 332 (725)
T 3nb0_A 255 RAAAH-SADVFTTVSQITAFEAEHLLKRKPDGI-LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNT 332 (725)
T ss_dssp HHHHH-HSSEEEESSHHHHHHHHHHTSSCCSEE-CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGE
T ss_pred HHHHH-hCCEEEECCHHHHHHHHHHhcCCCCEE-EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCce
Confidence 22222 59999999988876 2 22333 678999999987511 111111 1343334
Q ss_pred cEEEEEeecc-ccCCHHHHHHHHHHHHHhc-------CCcEEEEEeCCCCH-----------------------------
Q 008544 274 KGAYYIGRMV-WSKGYEELLGLLNIYHKEL-------AGLEMDLYGNGEDF----------------------------- 316 (562)
Q Consensus 274 ~~il~vGr~~-~~Kg~~~ll~a~~~l~~~~-------~~~~l~ivG~g~~~----------------------------- 316 (562)
+++..+||+. ..||++.+++|+.++.... .-+.|+|+..+...
T Consensus 333 liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~ 412 (725)
T 3nb0_A 333 LYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKR 412 (725)
T ss_dssp EEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHH
Confidence 4455579999 6899999999999997541 12567776553110
Q ss_pred ------------------------------------------------------------HHHHHHHHhcCCe------e
Q 008544 317 ------------------------------------------------------------DQIQRAAKKLKLV------V 330 (562)
Q Consensus 317 ------------------------------------------------------------~~l~~~~~~l~l~------~ 330 (562)
+.+...++++++. |
T Consensus 413 ~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drV 492 (725)
T 3nb0_A 413 IFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRV 492 (725)
T ss_dssp HHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSE
T ss_pred HHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCce
Confidence 1111222333332 2
Q ss_pred --EEeCCC---------CChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccC-------CceEe
Q 008544 331 --RVYPGR---------DHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQF-------PNCRT 391 (562)
Q Consensus 331 --~~~~~~---------~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~-------~~g~~ 391 (562)
.|++.+ .+..++|+.||+||+||.+|+||++++||||||+|||+|+.+| .+.+.++ .+|+.
T Consensus 493 KVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~l 572 (725)
T 3nb0_A 493 KMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIY 572 (725)
T ss_dssp EEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEE
T ss_pred eEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCceEE
Confidence 233332 1467999999999999999999999999999999999999998 8888765 35876
Q ss_pred e-----CCHHHHHHHHHHHHh----CCCC---CccHHHH---hcCCHHHHHHHHHHHHHhcCc
Q 008544 392 Y-----DGRNGFVEATLKALA----EEPA---QPTDAQT---HQLSWESATERFLQVAELVGD 439 (562)
Q Consensus 392 ~-----~d~~~la~~i~~ll~----~~~~---~l~~~ar---~~~sw~~~~~~~~~~y~~~~~ 439 (562)
+ .|+++++++|.+++. .++. .|+++++ +.|+|++++++++++|+.+..
T Consensus 573 V~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~ 635 (725)
T 3nb0_A 573 IVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLALR 635 (725)
T ss_dssp EECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 5 156666666655553 3332 5666665 789999999999999998763
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-22 Score=209.35 Aligned_cols=269 Identities=9% Similarity=-0.087 Sum_probs=170.8
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccE
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHK 228 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 228 (562)
...+.+++++.+||+||++......+. +...++..+ |++ ++|+....+..+... .......++.+. +|.
T Consensus 80 ~~~l~~~l~~~~pDvv~~~~~~~~~~~--~~~~a~~~~ip~v-~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~ 149 (376)
T 1v4v_A 80 LPQAARALKEMGADYVLVHGDTLTTFA--VAWAAFLEGIPVG-HVEAGLRSGNLKEPF------PEEANRRLTDVL-TDL 149 (376)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCHHHHH--HHHHHHHTTCCEE-EETCCCCCSCTTSST------THHHHHHHHHHH-CSE
T ss_pred HHHHHHHHHHcCCCEEEEeCChHHHHH--HHHHHHHhCCCEE-EEeCCCccccccCCC------chHHHHHHHHHH-hce
Confidence 345777888899999999976544333 233444444 765 455443211110000 011122233343 899
Q ss_pred EEEcChhhhccCC------Cccccc-cc-cCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHH
Q 008544 229 VIRLSAATQEYPN------SIVCNV-HG-VNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHK 300 (562)
Q Consensus 229 vi~~S~~~~~~~~------~~~~~v-~G-Vd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~ 300 (562)
+++.|+..++... +.+..+ ++ +|...+.+ .....+.. .++...+++++||+...||++.+++|+..+.+
T Consensus 150 ~~~~s~~~~~~l~~~g~~~~ki~vi~n~~~d~~~~~~-~~~~~~~~--~~~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~ 226 (376)
T 1v4v_A 150 DFAPTPLAKANLLKEGKREEGILVTGQTGVDAVLLAA-KLGRLPEG--LPEGPYVTVTMHRRENWPLLSDLAQALKRVAE 226 (376)
T ss_dssp EEESSHHHHHHHHTTTCCGGGEEECCCHHHHHHHHHH-HHCCCCTT--CCSSCEEEECCCCGGGGGGHHHHHHHHHHHHH
T ss_pred eeCCCHHHHHHHHHcCCCcceEEEECCchHHHHhhhh-hhhHHHHh--cCCCCEEEEEeCcccchHHHHHHHHHHHHHHh
Confidence 9999988876432 112122 22 22111100 00000111 12334566789999888899999999999988
Q ss_pred hcCCcEEEEE-eCCC-CHHHHHHHHHhcCCeeEEeC--CCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeC
Q 008544 301 ELAGLEMDLY-GNGE-DFDQIQRAAKKLKLVVRVYP--GRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCAN 376 (562)
Q Consensus 301 ~~~~~~l~iv-G~g~-~~~~l~~~~~~l~l~~~~~~--~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~ 376 (562)
+.|+++++++ |.++ ..+.+++.+.. ..++.+.+ +..+..++|+.||++|.|| + |+ ++||||||+|||+++
T Consensus 227 ~~~~~~lv~~~g~~~~~~~~l~~~~~~-~~~v~~~g~~g~~~~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~ 300 (376)
T 1v4v_A 227 AFPHLTFVYPVHLNPVVREAVFPVLKG-VRNFVLLDPLEYGSMAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVLR 300 (376)
T ss_dssp HCTTSEEEEECCSCHHHHHHHHHHHTT-CTTEEEECCCCHHHHHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEECS
T ss_pred hCCCeEEEEECCCCHHHHHHHHHHhcc-CCCEEEECCCCHHHHHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEecc
Confidence 8889999886 7554 35666666543 22566664 3346679999999999999 3 33 889999999999984
Q ss_pred -CCC-ccccccCCceEee-CCHHHHHHHHHHHHhCCCC--CccHHHHhcCCHHHHHHHHHHHHHhcCc
Q 008544 377 -HPS-NDFFKQFPNCRTY-DGRNGFVEATLKALAEEPA--QPTDAQTHQLSWESATERFLQVAELVGD 439 (562)
Q Consensus 377 -~~~-~e~v~~~~~g~~~-~d~~~la~~i~~ll~~~~~--~l~~~ar~~~sw~~~~~~~~~~y~~~~~ 439 (562)
.++ .+++.+ .+|+++ .|+++++++|.++++|++. +|++ ..+.|.|...++++.+.++....
T Consensus 301 ~~~~~~~~~~~-g~g~lv~~d~~~la~~i~~ll~d~~~~~~~~~-~~~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 301 NVTERPEGLKA-GILKLAGTDPEGVYRVVKGLLENPEELSRMRK-AKNPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp SSCSCHHHHHH-TSEEECCSCHHHHHHHHHHHHTCHHHHHHHHH-SCCSSCCSCHHHHHHHHHHHHTT
T ss_pred CCCcchhhhcC-CceEECCCCHHHHHHHHHHHHhChHhhhhhcc-cCCCCCCChHHHHHHHHHHHHhc
Confidence 566 666654 478888 6999999999999998764 5553 22567777788888888776653
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.3e-20 Score=193.60 Aligned_cols=235 Identities=9% Similarity=-0.023 Sum_probs=156.0
Q ss_pred hHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEE
Q 008544 152 DITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIR 231 (562)
Q Consensus 152 ~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~ 231 (562)
.+.+++++.+||+||++.......+ .. ..++ |++...+. +.. .. +.+++.+. +|.+++
T Consensus 102 ~l~~~l~~~~pDiv~~~~~~~~~~~--~~-~~~~--p~~~~~~~-~~~------~~---------~~~~~~~~-~d~ii~ 159 (374)
T 2xci_A 102 SVKRFEELSKPKALIVVEREFWPSL--II-FTKV--PKILVNAY-AKG------SL---------IEKILSKK-FDLIIM 159 (374)
T ss_dssp HHHHHHHHHCCSEEEEESCCCCHHH--HH-HCCS--CEEEEEEC-CCC------CH---------HHHHHHTT-CSEEEE
T ss_pred HHHHHHHHhCCCEEEEECccCcHHH--HH-HHhC--CEEEEEee-cCc------hH---------HHHHHHHh-CCEEEE
Confidence 4677888899999998654332111 11 1122 65544332 111 00 12222232 799999
Q ss_pred cChhhhccCCCc-cccccccCCC-CcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEE
Q 008544 232 LSAATQEYPNSI-VCNVHGVNPK-FLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDL 309 (562)
Q Consensus 232 ~S~~~~~~~~~~-~~~v~GVd~~-~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i 309 (562)
+|+..++...+. +..+. +.++ .|.+.... . ... ..+++++.|+ +.||++.+++|+.++.++.|+++|+|
T Consensus 160 ~S~~~~~~l~~~g~~ki~-vi~n~~f~~~~~~--~--~~l--~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvi 230 (374)
T 2xci_A 160 RTQEDVEKFKTFGAKRVF-SCGNLKFICQKGK--G--IKL--KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLIL 230 (374)
T ss_dssp SCHHHHHHHHTTTCCSEE-ECCCGGGCCCCCS--C--CCC--SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEE
T ss_pred CCHHHHHHHHHcCCCeEE-EcCCCccCCCcCh--h--hhh--cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEE
Confidence 999888743221 11111 1111 11111100 0 011 1255666664 57899999999999998889999999
Q ss_pred EeCCCCH-HHHHHHHHhcCCee----------EEeCCCCChHHHHhhcCEEEEccC-CCCCcHHHHHHHHcCCcEEee-C
Q 008544 310 YGNGEDF-DQIQRAAKKLKLVV----------RVYPGRDHADPIFHDYKVFLNPST-TDVVCTATAEALAMGKIVVCA-N 376 (562)
Q Consensus 310 vG~g~~~-~~l~~~~~~l~l~~----------~~~~~~~~~~~l~~~adv~v~pS~-~E~~~~~~lEAma~G~PVI~t-~ 376 (562)
+|+|+++ ++++++++++++.. .+.+...++.++|+.||++++||. .|++|++++||||||+|||++ +
T Consensus 231 vG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~ 310 (374)
T 2xci_A 231 VPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPY 310 (374)
T ss_dssp EESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSC
T ss_pred ECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCC
Confidence 9999876 68999999988752 223446889999999999888864 577899999999999999986 5
Q ss_pred CCC-cccccc---CCceEeeCCHHHHHHHHHHHHhCCCC--CccHHHH
Q 008544 377 HPS-NDFFKQ---FPNCRTYDGRNGFVEATLKALAEEPA--QPTDAQT 418 (562)
Q Consensus 377 ~~~-~e~v~~---~~~g~~~~d~~~la~~i~~ll~~~~~--~l~~~ar 418 (562)
.++ .|++.+ ...++.++|+++|+++|.++++| +. +|+++++
T Consensus 311 ~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d-~~r~~mg~~ar 357 (374)
T 2xci_A 311 THKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV-KKEIKVEEKSR 357 (374)
T ss_dssp CTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS-CCCCCHHHHHH
T ss_pred ccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH-HHHHHHHHHHH
Confidence 565 776654 23334457999999999999998 75 8888887
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-21 Score=179.96 Aligned_cols=142 Identities=15% Similarity=0.080 Sum_probs=124.6
Q ss_pred hcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHH--hcCC--eeEEeCCCCC--h
Q 008544 266 QNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAK--KLKL--VVRVYPGRDH--A 339 (562)
Q Consensus 266 ~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~--~l~l--~~~~~~~~~~--~ 339 (562)
....+.+.++++|+|++.+.||++.+++++..+ ++++|+++|.|++.+.+++.++ ++++ ++.+.+..++ +
T Consensus 16 ~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~ 91 (177)
T 2f9f_A 16 KFKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEEL 91 (177)
T ss_dssp TCCCCCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHH
T ss_pred ccccCCCCCEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHH
Confidence 344566688999999999999999999999776 6899999999988777888877 5554 4667777665 6
Q ss_pred HHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEee-CCHHHHHHHHHHHHhCCCC
Q 008544 340 DPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTY-DGRNGFVEATLKALAEEPA 411 (562)
Q Consensus 340 ~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~-~d~~~la~~i~~ll~~~~~ 411 (562)
.++|+.+|++|+||..|++|++++|||+||+|||+++.++ .+++.++.+|+++ +|+++++++|.++++|+..
T Consensus 92 ~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~d~~~l~~~i~~l~~~~~~ 165 (177)
T 2f9f_A 92 IDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNADVNEIIDAMKKVSKNPDK 165 (177)
T ss_dssp HHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECSCHHHHHHHHHHHHHCTTT
T ss_pred HHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEeCCCHHHHHHHHHHHHhCHHH
Confidence 6999999999999999999999999999999999999987 8999999999987 7999999999999998874
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=8.3e-20 Score=192.80 Aligned_cols=265 Identities=13% Similarity=0.037 Sum_probs=178.8
Q ss_pred CCCcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhh
Q 008544 160 EEADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQ 237 (562)
Q Consensus 160 ~~pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~ 237 (562)
..-|+|.+|....+ .+ ...+..+.. ++.+..|+.++...-...... .+.+.+.+-+.. ||.|...+....
T Consensus 148 ~~~D~VwVhDYhL~-ll--p~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~---~~r~ell~gll~--~DligF~t~~y~ 219 (496)
T 3t5t_A 148 SADPVYLVHDYQLV-GV--PALLREQRPDAPILLFVHIPWPSADYWRILPK---EIRTGILHGMLP--ATTIGFFADRWC 219 (496)
T ss_dssp CSSCEEEEESGGGT-TH--HHHHHHHCTTSCEEEECCSCCCCHHHHTTSCH---HHHHHHHHHHTT--SSEEEESSHHHH
T ss_pred CCCCEEEEeCccHh-HH--HHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcH---hHHHHHHHHHHh--CCEEEEecHHHH
Confidence 35689999998766 22 233444333 789999998775443221111 012222233333 688888886544
Q ss_pred cc--------C-C-----C-----------cc-ccccccCCCCcCcchh---hhHHhhcCCCCCccEEEEEeeccccCCH
Q 008544 238 EY--------P-N-----S-----------IV-CNVHGVNPKFLEIGEK---KMEQQQNGNKAFTKGAYYIGRMVWSKGY 288 (562)
Q Consensus 238 ~~--------~-~-----~-----------~~-~~v~GVd~~~~~~~~~---~~~~~~~~~~~~~~~il~vGr~~~~Kg~ 288 (562)
+. . . . .+ +..+|||++.|.+... ...+...+ +.++|+++||+++.||+
T Consensus 220 ~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~---~~~lIl~VgRLd~~KGi 296 (496)
T 3t5t_A 220 RNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD---GHRLVVHSGRTDPIKNA 296 (496)
T ss_dssp HHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT---TSEEEEEEEESSGGGCH
T ss_pred HHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC---CceEEEEcccCccccCH
Confidence 31 1 1 0 11 1224999987765432 22233333 47899999999999999
Q ss_pred HHHHHHHHHHHHhcCC---cEEEEEeC-----CCCH----HHHHHHHHhcCC-----eeEEeCCC--CChHHHHhhcCEE
Q 008544 289 EELLGLLNIYHKELAG---LEMDLYGN-----GEDF----DQIQRAAKKLKL-----VVRVYPGR--DHADPIFHDYKVF 349 (562)
Q Consensus 289 ~~ll~a~~~l~~~~~~---~~l~ivG~-----g~~~----~~l~~~~~~l~l-----~~~~~~~~--~~~~~l~~~adv~ 349 (562)
+.+++|+ ++.+++|+ +.|+++|. +++. +++++++.+.+. .+.+++.. ++...+|+.||+|
T Consensus 297 ~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~ 375 (496)
T 3t5t_A 297 ERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLL 375 (496)
T ss_dssp HHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEE
T ss_pred HHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEE
Confidence 9999999 99888886 46888864 2222 344455444432 46666553 3445999999999
Q ss_pred EEccCCCCCcHHHHHHHHcC---CcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC---CccHHHH--
Q 008544 350 LNPSTTDVVCTATAEALAMG---KIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA---QPTDAQT-- 418 (562)
Q Consensus 350 v~pS~~E~~~~~~lEAma~G---~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~---~l~~~ar-- 418 (562)
|+||..||||++.+|||||| .|+|.|+.+| .+.+. .+|++++ |+++++++|.++++++.. .+.++.+
T Consensus 376 vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~--~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~ 453 (496)
T 3t5t_A 376 IFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLG--EYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDA 453 (496)
T ss_dssp EECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG--GGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred EECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC--CCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 99999999999999999997 8999998876 66663 3678875 999999999999998864 3333333
Q ss_pred -hcCCHHHHHHHHHHHHHhcC
Q 008544 419 -HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 419 -~~~sw~~~~~~~~~~y~~~~ 438 (562)
..++++.-++.+++..+...
T Consensus 454 V~~~d~~~W~~~fl~~L~~~~ 474 (496)
T 3t5t_A 454 ARPWTLEAWVQAQLDGLAADH 474 (496)
T ss_dssp HTTCBHHHHHHHHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHHHhhcc
Confidence 78999999999998887664
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=181.78 Aligned_cols=357 Identities=10% Similarity=-0.030 Sum_probs=201.8
Q ss_pred hhccCCeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchh--hHHHHHHHh-
Q 008544 45 MDRKQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKE--QEAYVRWWL- 121 (562)
Q Consensus 45 m~~~~~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~--~~~~~~~~~- 121 (562)
-+..+|||++++.. .+|.......+++.|.++| |+|+++++.. . ....-..++.+..... .......+.
T Consensus 16 ~~~~~MrIl~~~~~----~~Gh~~~~~~la~~L~~~G-heV~v~~~~~--~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 87 (412)
T 3otg_A 16 IEGRHMRVLFASLG----THGHTYPLLPLATAARAAG-HEVTFATGEG--F-AGTLRKLGFEPVATGMPVFDGFLAALRI 87 (412)
T ss_dssp --CCSCEEEEECCS----SHHHHGGGHHHHHHHHHTT-CEEEEEECGG--G-HHHHHHTTCEEEECCCCHHHHHHHHHHH
T ss_pred cccceeEEEEEcCC----CcccHHHHHHHHHHHHHCC-CEEEEEccHH--H-HHHHHhcCCceeecCcccccchhhhhhh
Confidence 34456999999843 3565566778999999998 9999998731 0 0000011222221110 001100000
Q ss_pred -hhccCCCCCcccccccccchhccchh---hhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCC
Q 008544 122 -EDRTGFTSTFDTRFYPGKFAADKKSI---LAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTN 196 (562)
Q Consensus 122 -~~~~~~~~~~~i~~y~~r~~~~~~~~---~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~ 196 (562)
..+... +.................. .....+.+++++.+||+||++..... +...+++.+ |++.+.|+.
T Consensus 88 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~-----~~~aa~~~giP~v~~~~~~ 161 (412)
T 3otg_A 88 RFDTDSP-EGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYG-----AGLAALKAGIPTICHGVGR 161 (412)
T ss_dssp HHSCSCC-TTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHH-----HHHHHHHHTCCEEEECCSC
T ss_pred hhcccCC-ccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhH-----HHHHHHHcCCCEEEecccc
Confidence 000000 0000000000000000000 01256777888899999998854433 223444445 888887765
Q ss_pred cHHHHhhhhchHHHHHHHHHHHHHHHH-----------HhccEEEEcChhhhccCCCcccc-ccccCCCCcCcchhhhHH
Q 008544 197 YLEYVKREKNDRLQAFLLEFVNSWLAR-----------VHCHKVIRLSAATQEYPNSIVCN-VHGVNPKFLEIGEKKMEQ 264 (562)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~ad~vi~~S~~~~~~~~~~~~~-v~GVd~~~~~~~~~~~~~ 264 (562)
..... ....+.+.+..+..+ ..+|.+++.+....+.+...+.. ...+......... ...
T Consensus 162 ~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 232 (412)
T 3otg_A 162 DTPDD-------LTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPVPFAEQG--DLP 232 (412)
T ss_dssp CCCSH-------HHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECCCCCCCCCC--CCC
T ss_pred cCchh-------hhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCCcceeeccCCCCCC--CCC
Confidence 32110 112233333333333 13678888887666544321110 0111111111000 001
Q ss_pred hh--cCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCC-HHHHHHHHHhcCCeeEEeCCCCChHH
Q 008544 265 QQ--NGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGED-FDQIQRAAKKLKLVVRVYPGRDHADP 341 (562)
Q Consensus 265 ~~--~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~-~~~l~~~~~~l~l~~~~~~~~~~~~~ 341 (562)
.. ...++...++++.|++. .++.+.+.++++.+.+. ++++++++.+.. .+.+++ +..++.+.+.. +..+
T Consensus 233 ~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~~~~~l~~----~~~~v~~~~~~-~~~~ 304 (412)
T 3otg_A 233 AWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL--DADVLVASGPSLDVSGLGE----VPANVRLESWV-PQAA 304 (412)
T ss_dssp GGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHTS--SSEEEEECCSSCCCTTCCC----CCTTEEEESCC-CHHH
T ss_pred CccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC--CCEEEEEECCCCChhhhcc----CCCcEEEeCCC-CHHH
Confidence 01 11223345667778875 77888888887777643 677777665443 333322 23346666666 7889
Q ss_pred HHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC----CHHHHHHHHHHHHhCCCC-
Q 008544 342 IFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPA- 411 (562)
Q Consensus 342 l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~- 411 (562)
+|+.||++|.+| .+.+++|||++|+|+|+.+.++ .+.+.+...|++++ |+++++++|.++++|+..
T Consensus 305 ~l~~ad~~v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~ 380 (412)
T 3otg_A 305 LLPHVDLVVHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYR 380 (412)
T ss_dssp HGGGCSEEEESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCHHHH
T ss_pred HHhcCcEEEECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHH
Confidence 999999999775 3589999999999999986653 57777888888874 899999999999999875
Q ss_pred -CccHHHH---hcCCHHHHHHHHHHHHHh
Q 008544 412 -QPTDAQT---HQLSWESATERFLQVAEL 436 (562)
Q Consensus 412 -~l~~~ar---~~~sw~~~~~~~~~~y~~ 436 (562)
+|++.++ ..++|+.+++.+.++++.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 381 AGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 6666555 778999999999998854
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-16 Score=163.14 Aligned_cols=255 Identities=10% Similarity=-0.025 Sum_probs=157.3
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccE
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHK 228 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 228 (562)
+..+.+++++.+||+|+....+.... ....++..+ |++..-.+..+ +. .++++.++ ++.
T Consensus 81 ~~~~~~~l~~~~PDvVi~~g~~~s~p---~~laA~~~~iP~vihe~n~~~--------G~--------~nr~l~~~-a~~ 140 (365)
T 3s2u_A 81 LFQALRVIRQLRPVCVLGLGGYVTGP---GGLAARLNGVPLVIHEQNAVA--------GT--------ANRSLAPI-ARR 140 (365)
T ss_dssp HHHHHHHHHHHCCSEEEECSSSTHHH---HHHHHHHTTCCEEEEECSSSC--------CH--------HHHHHGGG-CSE
T ss_pred HHHHHHHHHhcCCCEEEEcCCcchHH---HHHHHHHcCCCEEEEecchhh--------hh--------HHHhhccc-cce
Confidence 44567788899999999987655411 122233333 66633222121 11 23445555 788
Q ss_pred EEEcChhhhccCCCccccccccCCCCcCcchhhhHHhhcCCCCCccEEE-EEeeccccCCHHHHHHHHHHHHHhcCCcEE
Q 008544 229 VIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAY-YIGRMVWSKGYEELLGLLNIYHKELAGLEM 307 (562)
Q Consensus 229 vi~~S~~~~~~~~~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il-~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l 307 (562)
+++..+.......+.....+.+..+++... ....+.+++.+.++ +.|+....+..+.+.+++..+..+. ++.+
T Consensus 141 v~~~~~~~~~~~~k~~~~g~pvr~~~~~~~-----~~~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~~-~~~v 214 (365)
T 3s2u_A 141 VCEAFPDTFPASDKRLTTGNPVRGELFLDA-----HARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLEI-RPAI 214 (365)
T ss_dssp EEESSTTSSCC---CEECCCCCCGGGCCCT-----TSSCCCTTSCCEEEECCTTTTCSHHHHHHHHHHHTSCTTT-CCEE
T ss_pred eeecccccccCcCcEEEECCCCchhhccch-----hhhcccCCCCcEEEEECCcCCccccchhhHHHHHhccccc-ceEE
Confidence 877655432222222222233443443221 11233344445544 5566777777777888887765443 4555
Q ss_pred EEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC--------
Q 008544 308 DLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-------- 379 (562)
Q Consensus 308 ~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-------- 379 (562)
++.++..+.+.+.+..+..+.++++++..+++.++|+.||++|.-+ .++++.|+|++|+|+|..+.+.
T Consensus 215 i~~~G~~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDlvI~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~ 290 (365)
T 3s2u_A 215 RHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTR 290 (365)
T ss_dssp EEECCTTTHHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSEEEECC----CHHHHHHHHHHTCCEEECC-----CCHHHH
T ss_pred EEecCccccccccceecccccccccccchhhhhhhhccceEEEecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHH
Confidence 5544334567777788888888889988999999999999999543 3789999999999999876652
Q ss_pred -ccccccCCceEeeC----CHHHHHHHHHHHHhCCCC--CccHHHHhcCCHHHHHHHHHHHHH
Q 008544 380 -NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPA--QPTDAQTHQLSWESATERFLQVAE 435 (562)
Q Consensus 380 -~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~--~l~~~ar~~~sw~~~~~~~~~~y~ 435 (562)
.+.+.+...|++++ |+++|+++|.++++|++. +|++++++.-. ...++++.+..+
T Consensus 291 NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~-~~aa~~ia~~i~ 352 (365)
T 3s2u_A 291 NAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAK-PEATRTVVDACL 352 (365)
T ss_dssp HHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCC-TTHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCC-ccHHHHHHHHHH
Confidence 24466666677753 689999999999999986 88888873221 223444444443
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-17 Score=172.50 Aligned_cols=340 Identities=11% Similarity=0.035 Sum_probs=192.4
Q ss_pred CeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCC
Q 008544 50 QHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTS 129 (562)
Q Consensus 50 ~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (562)
|||++|+..- | + ......+.+.|.+++++++.++++... . +.....+.. ....+
T Consensus 26 ~ki~~v~Gtr-~---~-~~~~a~li~~l~~~~~~~~~~~~tG~h----------~------~~~~~~~~~-----~~i~~ 79 (396)
T 3dzc_A 26 KKVLIVFGTR-P---E-AIKMAPLVQQLCQDNRFVAKVCVTGQH----------R------EMLDQVLEL-----FSITP 79 (396)
T ss_dssp EEEEEEECSH-H---H-HHHHHHHHHHHHHCTTEEEEEEECCSS----------S------HHHHHHHHH-----TTCCC
T ss_pred CeEEEEEecc-H---h-HHHHHHHHHHHHhCCCCcEEEEEeccc----------H------HHHHHHHHh-----cCCCC
Confidence 6999998765 3 2 233455678888875588887766210 0 101111111 11122
Q ss_pred CcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchH
Q 008544 130 TFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDR 208 (562)
Q Consensus 130 ~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~ 208 (562)
+..+................+..+.+++++.+||+||+++.....+. +...+++.+ |++. ++.....+..+..
T Consensus 80 ~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~--~~~aa~~~~IPv~h-~~ag~rs~~~~~~--- 153 (396)
T 3dzc_A 80 DFDLNIMEPGQTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFA--ASLAAYYQQIPVGH-VEAGLRTGNIYSP--- 153 (396)
T ss_dssp SEECCCCCTTCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHH--HHHHHHTTTCCEEE-ETCCCCCSCTTSS---
T ss_pred ceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHH--HHHHHHHhCCCEEE-EECCccccccccC---
Confidence 22222110000001111223556888899999999999987665444 333444444 6553 3322111111100
Q ss_pred HHHHHHHHHHHHH-HHHhccEEEEcChhhhccC------CCccccc-c-ccCCCCcCcch-------hhhHHhhcC-CCC
Q 008544 209 LQAFLLEFVNSWL-ARVHCHKVIRLSAATQEYP------NSIVCNV-H-GVNPKFLEIGE-------KKMEQQQNG-NKA 271 (562)
Q Consensus 209 ~~~~~~~~~~~~~-~~~~ad~vi~~S~~~~~~~------~~~~~~v-~-GVd~~~~~~~~-------~~~~~~~~~-~~~ 271 (562)
+....++.+ .+. +|.+++.|+..++.. .+.+..+ + ++|...+.+.. ....+...+ +++
T Consensus 154 ----~~~~~~r~~~~~~-a~~~~~~se~~~~~l~~~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~ 228 (396)
T 3dzc_A 154 ----WPEEGNRKLTAAL-TQYHFAPTDTSRANLLQENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDA 228 (396)
T ss_dssp ----TTHHHHHHHHHHT-CSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCT
T ss_pred ----CcHHHHHHHHHHh-cCEEECCCHHHHHHHHHcCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCC
Confidence 001122232 333 899999998877632 2222222 2 23322211111 022234455 344
Q ss_pred CccEEE-EEeec-cccCCHHHHHHHHHHHHHhcCCcEEEEE-eCCCC-HHHHHHHHHhcCCeeEEeCCC--CChHHHHhh
Q 008544 272 FTKGAY-YIGRM-VWSKGYEELLGLLNIYHKELAGLEMDLY-GNGED-FDQIQRAAKKLKLVVRVYPGR--DHADPIFHD 345 (562)
Q Consensus 272 ~~~~il-~vGr~-~~~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~~-~~~l~~~~~~l~l~~~~~~~~--~~~~~l~~~ 345 (562)
+.++++ +.+|. ...|+++.+++|+.++.+++|++++++. |.++. .+.+++... ...++.+++.. .+...+|+.
T Consensus 229 ~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~-~~~~v~~~~~lg~~~~~~l~~~ 307 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLK-GVSNIVLIEPQQYLPFVYLMDR 307 (396)
T ss_dssp TSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTT-TCTTEEEECCCCHHHHHHHHHH
T ss_pred CCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHc-CCCCEEEeCCCCHHHHHHHHHh
Confidence 445554 44454 3458899999999999888899999886 54432 233333221 12246665443 466699999
Q ss_pred cCEEEEccCCCCCcHHHHHHHHcCCcEEee-CCCC-ccccccCCceEeeC-CHHHHHHHHHHHHhCCCC--CccHHHHhc
Q 008544 346 YKVFLNPSTTDVVCTATAEALAMGKIVVCA-NHPS-NDFFKQFPNCRTYD-GRNGFVEATLKALAEEPA--QPTDAQTHQ 420 (562)
Q Consensus 346 adv~v~pS~~E~~~~~~lEAma~G~PVI~t-~~~~-~e~v~~~~~g~~~~-d~~~la~~i~~ll~~~~~--~l~~~ar~~ 420 (562)
||++|.+| | ++ .+|||++|+|||++ +.++ .|.+.++. +++++ |++++++++.++++|++. +|++++ ..
T Consensus 308 ad~vv~~S---G-g~-~~EA~a~G~PvV~~~~~~~~~e~v~~G~-~~lv~~d~~~l~~ai~~ll~d~~~~~~m~~~~-~~ 380 (396)
T 3dzc_A 308 AHIILTDS---G-GI-QEEAPSLGKPVLVMRETTERPEAVAAGT-VKLVGTNQQQICDALSLLLTDPQAYQAMSQAH-NP 380 (396)
T ss_dssp CSEEEESC---S-GG-GTTGGGGTCCEEECCSSCSCHHHHHHTS-EEECTTCHHHHHHHHHHHHHCHHHHHHHHTSC-CT
T ss_pred cCEEEECC---c-cH-HHHHHHcCCCEEEccCCCcchHHHHcCc-eEEcCCCHHHHHHHHHHHHcCHHHHHHHhhcc-CC
Confidence 99999998 3 33 38999999999999 6666 77887764 56665 899999999999998764 444332 33
Q ss_pred CCHHHHHHHHHHHH
Q 008544 421 LSWESATERFLQVA 434 (562)
Q Consensus 421 ~sw~~~~~~~~~~y 434 (562)
|.....++++.+..
T Consensus 381 ~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 381 YGDGKACQRIADIL 394 (396)
T ss_dssp TCCSCHHHHHHHHH
T ss_pred CcCChHHHHHHHHH
Confidence 55556666666544
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2e-17 Score=168.24 Aligned_cols=240 Identities=11% Similarity=-0.038 Sum_probs=151.5
Q ss_pred CCCcEEEecCCchhhh-h-hchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhh
Q 008544 160 EEADIAVLEEPEHLTW-F-HHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAAT 236 (562)
Q Consensus 160 ~~pDvV~~~~~~~~~~-~-~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~ 236 (562)
.++|+|++++|...+. + .....+.++.+ +++..+|+.++..... . .+.....+++.+. ||.||+.|+.+
T Consensus 73 ~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~~--~-----~~~~~~E~~~y~~-aD~Ii~~S~~~ 144 (339)
T 3rhz_A 73 RHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFSG--N-----FYLMDRTIAYYNK-ADVVVAPSQKM 144 (339)
T ss_dssp CTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCGG--G-----GGGHHHHHHHHTT-CSEEEESCHHH
T ss_pred CCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCcc--c-----hhhHHHHHHHHHH-CCEEEECCHHH
Confidence 4589999999975321 1 11111222324 8999999876543211 1 1111234455554 89999999999
Q ss_pred hccCCCcccc-ccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCC
Q 008544 237 QEYPNSIVCN-VHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGED 315 (562)
Q Consensus 237 ~~~~~~~~~~-v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~ 315 (562)
++...+.... ..-++.+.++..... ....+.+.+.++|+|++.....+ +. + .++++|+++|+|++
T Consensus 145 ~~~l~~~G~~~~ki~~~~~~~~~~~~----~~~~~~~~~~i~yaG~l~k~~~L----~~---l---~~~~~f~ivG~G~~ 210 (339)
T 3rhz_A 145 IDKLRDFGMNVSKTVVQGMWDHPTQA----PMFPAGLKREIHFPGNPERFSFV----KE---W---KYDIPLKVYTWQNV 210 (339)
T ss_dssp HHHHHHTTCCCSEEEECCSCCCCCCC----CCCCCEEEEEEEECSCTTTCGGG----GG---C---CCSSCEEEEESCCC
T ss_pred HHHHHHcCCCcCceeecCCCCccCcc----cccccCCCcEEEEeCCcchhhHH----Hh---C---CCCCeEEEEeCCcc
Confidence 8853221111 111111112211100 01123346789999999853222 11 1 37899999999987
Q ss_pred HHHHHHHHHhcCCeeEEeCCCCC--hHHHHhhcCEEEEc-cC------CCCCcHHHHHHHHcCCcEEeeCCCC-cccccc
Q 008544 316 FDQIQRAAKKLKLVVRVYPGRDH--ADPIFHDYKVFLNP-ST------TDVVCTATAEALAMGKIVVCANHPS-NDFFKQ 385 (562)
Q Consensus 316 ~~~l~~~~~~l~l~~~~~~~~~~--~~~l~~~adv~v~p-S~------~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~ 385 (562)
. .++ ++.++|..+. +..+++.+|+.+.+ +. ...+|.+++||||||+|||+++.++ .+++.+
T Consensus 211 ~--------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~ 281 (339)
T 3rhz_A 211 E--------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIEN 281 (339)
T ss_dssp C--------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHH
T ss_pred c--------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHh
Confidence 5 245 6777766543 34778788877775 11 1246999999999999999999887 899999
Q ss_pred CCceEeeCCHHHHHHHHHHHHhCCCCCccHHHH---hcCCHHHHHHHH
Q 008544 386 FPNCRTYDGRNGFVEATLKALAEEPAQPTDAQT---HQLSWESATERF 430 (562)
Q Consensus 386 ~~~g~~~~d~~~la~~i~~ll~~~~~~l~~~ar---~~~sw~~~~~~~ 430 (562)
+.+|+++++.++++++|..+..+.-.+|+++++ +.++|+..+++.
T Consensus 282 ~~~G~~~~~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~~~f~k~~ 329 (339)
T 3rhz_A 282 NGLGWIVKDVEEAIMKVKNVNEDEYIELVKNVRSFNPILRKGFFTRRL 329 (339)
T ss_dssp HTCEEEESSHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHTTHHHHHH
T ss_pred CCeEEEeCCHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 999999999999999999875433237888887 445555555544
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.8e-16 Score=165.68 Aligned_cols=341 Identities=10% Similarity=0.026 Sum_probs=189.8
Q ss_pred CCeEEEEecccCCCcccccccHHHHHHHHHHcC-CCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCC
Q 008544 49 QQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDG-ERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGF 127 (562)
Q Consensus 49 ~~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~G-g~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~ 127 (562)
++||++|+..- | + ......+.+.|.+++ ++++.++++... + .. . ...+.. ...
T Consensus 27 ~~kI~~v~Gtr-~---~-~~~~a~li~~l~~~~~~~~~~~~~tG~h-------~------~m-~--~~~~~~-----~~i 80 (403)
T 3ot5_A 27 KIKVMSIFGTR-P---E-AIKMAPLVLALEKEPETFESTVVITAQH-------R------EM-L--DQVLEI-----FDI 80 (403)
T ss_dssp CEEEEEEECSH-H---H-HHHHHHHHHHHHTCTTTEEEEEEECC-------------------C--HHHHHH-----TTC
T ss_pred cceEEEEEecC-h---h-HHHHHHHHHHHHhCCCCCcEEEEEecCc-------H------HH-H--HHHHHh-----cCC
Confidence 36999998765 2 2 233455678888874 489888876210 0 00 0 011111 111
Q ss_pred CCCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhc
Q 008544 128 TSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKN 206 (562)
Q Consensus 128 ~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~ 206 (562)
.++..+................+..+.+++++.+||+|++++.....+. +...+++.+ |++ .++.....+..+...
T Consensus 81 ~~~~~l~v~~~~~~~~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~--~~laA~~~~IPv~-h~~aglrs~~~~~~~ 157 (403)
T 3ot5_A 81 KPDIDLDIMKKGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFA--AGLATFYQQKMLG-HVEAGLRTWNKYSPF 157 (403)
T ss_dssp CCSEECCCCC-CCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHH--HHHHHHHTTCEEE-EESCCCCCSCTTSST
T ss_pred CCCcccccCCCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHH--HHHHHHHhCCCEE-EEECCccccccccCC
Confidence 1222222110000000111223556888899999999999987655443 333445545 554 333221111110000
Q ss_pred hHHHHHHHHHHHHHHHHHhccEEEEcChhhhccC------CCccccc-c-ccCCCCcCcch--hhhHHhhcCCCCCccEE
Q 008544 207 DRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYP------NSIVCNV-H-GVNPKFLEIGE--KKMEQQQNGNKAFTKGA 276 (562)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~------~~~~~~v-~-GVd~~~~~~~~--~~~~~~~~~~~~~~~~i 276 (562)
. ......++.+. +|.+++.|+..++.. .+.+..+ + ++|...+.+.. ........ ++...++
T Consensus 158 ---p---~~~~r~~~~~~-a~~~~~~se~~~~~l~~~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l--~~~~~vl 228 (403)
T 3ot5_A 158 ---P---EEMNRQLTGVM-ADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHPILENL--GDNRLIL 228 (403)
T ss_dssp ---T---HHHHHHHHHHH-CSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSC--TTCEEEE
T ss_pred ---c---HHHHHHHHHHh-cCEEECCCHHHHHHHHHcCCCcccEEEeCCchHHHHHhhhhhhcchHHHHhc--cCCCEEE
Confidence 0 01122233444 899999998887632 2223222 2 33432221111 11122222 2323445
Q ss_pred EEEeeccc-cCCHHHHHHHHHHHHHhcCCcEEEEEe-CCCC-HHHHHHHHHhcCCeeEEeCCCC--ChHHHHhhcCEEEE
Q 008544 277 YYIGRMVW-SKGYEELLGLLNIYHKELAGLEMDLYG-NGED-FDQIQRAAKKLKLVVRVYPGRD--HADPIFHDYKVFLN 351 (562)
Q Consensus 277 l~vGr~~~-~Kg~~~ll~a~~~l~~~~~~~~l~ivG-~g~~-~~~l~~~~~~l~l~~~~~~~~~--~~~~l~~~adv~v~ 351 (562)
++.||... .|+++.+++++.++.+++|++++++.+ .++. .+.+++... ...++.++++.. +...+|+.||++|.
T Consensus 229 v~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~-~~~~v~l~~~l~~~~~~~l~~~ad~vv~ 307 (403)
T 3ot5_A 229 MTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILG-GHERIHLIEPLDAIDFHNFLRKSYLVFT 307 (403)
T ss_dssp ECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHT-TCTTEEEECCCCHHHHHHHHHHEEEEEE
T ss_pred EEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhC-CCCCEEEeCCCCHHHHHHHHHhcCEEEE
Confidence 56666543 578999999999999888999998874 3321 233333221 123466666544 67799999999998
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEee-CCCC-ccccccCCceEeeC-CHHHHHHHHHHHHhCCCC--CccHHHHhcCCHHHH
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCA-NHPS-NDFFKQFPNCRTYD-GRNGFVEATLKALAEEPA--QPTDAQTHQLSWESA 426 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t-~~~~-~e~v~~~~~g~~~~-d~~~la~~i~~ll~~~~~--~l~~~ar~~~sw~~~ 426 (562)
+| |...+|||++|+|+|++ +.++ .|.+..+ ++++++ |++++++++.++++|+.. +|++++ ..|.....
T Consensus 308 ~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv~~d~~~l~~ai~~ll~~~~~~~~m~~~~-~~~g~~~a 380 (403)
T 3ot5_A 308 DS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLIGTNKENLIKEALDLLDNKESHDKMAQAA-NPYGDGFA 380 (403)
T ss_dssp CC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEECCSCHHHHHHHHHHHHHCHHHHHHHHHSC-CTTCCSCH
T ss_pred CC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEcCCCHHHHHHHHHHHHcCHHHHHHHHhhc-CcccCCcH
Confidence 88 34449999999999999 5566 6777555 788775 999999999999998764 454332 23444444
Q ss_pred HHHHHHHHH
Q 008544 427 TERFLQVAE 435 (562)
Q Consensus 427 ~~~~~~~y~ 435 (562)
++++.+...
T Consensus 381 a~rI~~~l~ 389 (403)
T 3ot5_A 381 ANRILAAIK 389 (403)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444443
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2e-15 Score=157.08 Aligned_cols=261 Identities=9% Similarity=0.010 Sum_probs=156.3
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHh---
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVH--- 225 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 225 (562)
...+.+++++.+||+||++..... +...++..+ |++.+.|+...... .........+...+.++.
T Consensus 103 ~~~l~~~l~~~~PD~Vv~~~~~~~-----~~~aa~~~giP~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 171 (391)
T 3tsa_A 103 LPEYLRLAEAWRPSVLLVDVCALI-----GRVLGGLLDLPVVLHRWGVDPTAG------PFSDRAHELLDPVCRHHGLTG 171 (391)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCHH-----HHHHHHHTTCCEEEECCSCCCTTT------HHHHHHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHhcCCCEEEeCcchhH-----HHHHHHHhCCCEEEEecCCccccc------cccchHHHHHHHHHHHcCCCC
Confidence 345677888899999998753322 233445555 88877775532111 111223333333344331
Q ss_pred ---ccEEEEcChhhhccCCCccccccccCCCCcCcchhhhHHhhcC-CCCCccEEEEEeeccccCCH-HHHHHHHHHHHH
Q 008544 226 ---CHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNG-NKAFTKGAYYIGRMVWSKGY-EELLGLLNIYHK 300 (562)
Q Consensus 226 ---ad~vi~~S~~~~~~~~~~~~~v~GVd~~~~~~~~~~~~~~~~~-~~~~~~~il~vGr~~~~Kg~-~~ll~a~~~l~~ 300 (562)
.+.++.......+...... +....+.+.......+.... .++...++++.|+....|+. ..+++++.+. .
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~ 246 (391)
T 3tsa_A 172 LPTPELILDPCPPSLQASDAPQ----GAPVQYVPYNGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-T 246 (391)
T ss_dssp SCCCSEEEECSCGGGSCTTSCC----CEECCCCCCCCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-H
T ss_pred CCCCceEEEecChhhcCCCCCc----cCCeeeecCCCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-c
Confidence 2566666544433332111 01111110000000001111 12224456667888765544 7777777777 7
Q ss_pred hcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-
Q 008544 301 ELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS- 379 (562)
Q Consensus 301 ~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~- 379 (562)
+.|+++++++|++++.+.++ .+..++++.+ +.+..+++..||++|.. +.+.+++|||++|+|+|+....+
T Consensus 247 ~~p~~~~v~~~~~~~~~~l~----~~~~~v~~~~-~~~~~~ll~~ad~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~ 317 (391)
T 3tsa_A 247 ELPGVEAVIAVPPEHRALLT----DLPDNARIAE-SVPLNLFLRTCELVICA----GGSGTAFTATRLGIPQLVLPQYFD 317 (391)
T ss_dssp TSTTEEEEEECCGGGGGGCT----TCCTTEEECC-SCCGGGTGGGCSEEEEC----CCHHHHHHHHHTTCCEEECCCSTT
T ss_pred cCCCeEEEEEECCcchhhcc----cCCCCEEEec-cCCHHHHHhhCCEEEeC----CCHHHHHHHHHhCCCEEecCCccc
Confidence 78899999998876544332 2233455544 45677888999999954 45679999999999999965432
Q ss_pred ----ccccccCCceEeeC------CHHHHHHHHHHHHhCCCC--CccHHHH---hcCCHHHHHHHHHHHHH
Q 008544 380 ----NDFFKQFPNCRTYD------GRNGFVEATLKALAEEPA--QPTDAQT---HQLSWESATERFLQVAE 435 (562)
Q Consensus 380 ----~e~v~~~~~g~~~~------d~~~la~~i~~ll~~~~~--~l~~~ar---~~~sw~~~~~~~~~~y~ 435 (562)
.+.+.+...|..++ |++++++++.++++|+.. +|++.++ ...+|+.+++.+.+..+
T Consensus 318 q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 318 QFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred HHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 56677788888864 589999999999999874 5555444 67889888887776543
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.9e-15 Score=155.36 Aligned_cols=146 Identities=12% Similarity=-0.019 Sum_probs=95.4
Q ss_pred CccEEEEEeeccccC----------CHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHH
Q 008544 272 FTKGAYYIGRMVWSK----------GYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADP 341 (562)
Q Consensus 272 ~~~~il~vGr~~~~K----------g~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~ 341 (562)
...+++++|++...| .+..+++++.. . ++++++++++.+.+.++ .+..++++.+.. +..+
T Consensus 227 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~----~-~~~~v~~~~~~~~~~l~----~~~~~v~~~~~~-~~~~ 296 (398)
T 4fzr_A 227 QPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK----L-GFEVVVAVSDKLAQTLQ----PLPEGVLAAGQF-PLSA 296 (398)
T ss_dssp SCEEECC----------------CCSHHHHHHHGGG----G-TCEEEECCCC------------CCTTEEEESCC-CHHH
T ss_pred CCEEEEEccCcccccccccccchHHHHHHHHHHHHh----C-CCEEEEEeCCcchhhhc----cCCCcEEEeCcC-CHHH
Confidence 355677889986554 45566665532 2 68899988776544443 334456666654 6889
Q ss_pred HHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCC----C-ccccccCCceEeeC----CHHHHHHHHHHHHhCCCC-
Q 008544 342 IFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHP----S-NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPA- 411 (562)
Q Consensus 342 l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~----~-~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~- 411 (562)
++..||++|.. +.+.+++|||++|+|+|+.... + .+.+.+...|+.++ |+++++++|.++++|+..
T Consensus 297 ll~~ad~~v~~----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~ 372 (398)
T 4fzr_A 297 IMPACDVVVHH----GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDSSYV 372 (398)
T ss_dssp HGGGCSEEEEC----CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCTHHH
T ss_pred HHhhCCEEEec----CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHH
Confidence 99999999954 4578999999999999996543 3 66778888898874 788999999999999875
Q ss_pred -CccHHHH---hcCCHHHHHHHHH
Q 008544 412 -QPTDAQT---HQLSWESATERFL 431 (562)
Q Consensus 412 -~l~~~ar---~~~sw~~~~~~~~ 431 (562)
+|++.++ ...+|+.+++.+.
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 373 GNARRLAAEMATLPTPADIVRLIE 396 (398)
T ss_dssp HHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHh
Confidence 5555554 7788888887764
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.63 E-value=5.9e-15 Score=155.53 Aligned_cols=154 Identities=12% Similarity=0.092 Sum_probs=107.2
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEE-EEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEE
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEM-DLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLN 351 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l-~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~ 351 (562)
..+++++|++. .++.+.+.+++..+. +.+++++ +++|.+++.+.++ .+..++.+.+..++. ++|+.+|++|.
T Consensus 233 ~~v~v~~Gs~~-~~~~~~~~~~~~~l~-~~~~~~~~~~~G~~~~~~~l~----~~~~~v~~~~~~~~~-~~l~~ad~~v~ 305 (430)
T 2iyf_A 233 KVVLVSLGSAF-TKQPAFYRECVRAFG-NLPGWHLVLQIGRKVTPAELG----ELPDNVEVHDWVPQL-AILRQADLFVT 305 (430)
T ss_dssp EEEEEECTTTC-C-CHHHHHHHHHHHT-TCTTEEEEEECC---CGGGGC----SCCTTEEEESSCCHH-HHHTTCSEEEE
T ss_pred CeEEEEcCCCC-CCcHHHHHHHHHHHh-cCCCeEEEEEeCCCCChHHhc----cCCCCeEEEecCCHH-HHhhccCEEEE
Confidence 45777889987 556555555554443 2257887 5678876554442 233356666666555 89999999998
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC----CHHHHHHHHHHHHhCCCC--CccHHHH--
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPA--QPTDAQT-- 418 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~--~l~~~ar-- 418 (562)
.+ ..++++|||++|+|+|+++.++ .+.+.+...|+.++ |+++++++|.++++|+.. ++++.++
T Consensus 306 ~~----G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~ 381 (430)
T 2iyf_A 306 HA----GAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEVARRLRRIQAEM 381 (430)
T ss_dssp CC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CC----CccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 65 2479999999999999997754 45567777888874 889999999999998764 4555444
Q ss_pred -hcCCHHHHHHHHHHHHHhc
Q 008544 419 -HQLSWESATERFLQVAELV 437 (562)
Q Consensus 419 -~~~sw~~~~~~~~~~y~~~ 437 (562)
...+++.+++.+.+.++..
T Consensus 382 ~~~~~~~~~~~~i~~~~~~~ 401 (430)
T 2iyf_A 382 AQEGGTRRAADLIEAELPAR 401 (430)
T ss_dssp HHHCHHHHHHHHHHTTSCC-
T ss_pred HhcCcHHHHHHHHHHHhhcc
Confidence 5678888888887776544
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=2.2e-14 Score=149.60 Aligned_cols=147 Identities=9% Similarity=0.030 Sum_probs=103.8
Q ss_pred ccEEEEEeecccc-CCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEE
Q 008544 273 TKGAYYIGRMVWS-KGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLN 351 (562)
Q Consensus 273 ~~~il~vGr~~~~-Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~ 351 (562)
..+++++|++... ++.+.+.++++.+.+. ++++++++++++.+.++ .+..++.+.+.. +..+++..||++|.
T Consensus 233 ~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~g~~~~~~l~----~~~~~v~~~~~~-~~~~ll~~ad~~v~ 305 (398)
T 3oti_A 233 PEVAITMGTIELQAFGIGAVEPIIAAAGEV--DADFVLALGDLDISPLG----TLPRNVRAVGWT-PLHTLLRTCTAVVH 305 (398)
T ss_dssp CEEEECCTTTHHHHHCGGGHHHHHHHHHTS--SSEEEEECTTSCCGGGC----SCCTTEEEESSC-CHHHHHTTCSEEEE
T ss_pred CEEEEEcCCCccccCcHHHHHHHHHHHHcC--CCEEEEEECCcChhhhc----cCCCcEEEEccC-CHHHHHhhCCEEEE
Confidence 4566778998654 3555555555555433 78999998876644333 233356666655 88899999999995
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEee----CCCC-c--cccccCCceEeeC----CHHHHHHHHHHHHhCCCC--CccHHHH
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCA----NHPS-N--DFFKQFPNCRTYD----GRNGFVEATLKALAEEPA--QPTDAQT 418 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t----~~~~-~--e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~--~l~~~ar 418 (562)
. +.+.+++|||++|+|+|+. +... . +.+.+...|+.++ ++++++ ++++|+.. +|++.++
T Consensus 306 ~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~~~~~~~~~~~~~ 377 (398)
T 3oti_A 306 H----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIGDESLRTAAREVRE 377 (398)
T ss_dssp C----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHCHHHHHHHHHHHH
T ss_pred C----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcCHHHHHHHHHHHH
Confidence 4 4567999999999999995 3344 6 8888888998874 444454 78887764 4555444
Q ss_pred ---hcCCHHHHHHHHHHHH
Q 008544 419 ---HQLSWESATERFLQVA 434 (562)
Q Consensus 419 ---~~~sw~~~~~~~~~~y 434 (562)
...+|+.+++.+.++.
T Consensus 378 ~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 378 EMVALPTPAETVRRIVERI 396 (398)
T ss_dssp HHHTSCCHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHh
Confidence 7789999998887764
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.50 E-value=7.3e-13 Score=137.78 Aligned_cols=152 Identities=13% Similarity=0.020 Sum_probs=102.9
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEE-EeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEE
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDL-YGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLN 351 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i-vG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~ 351 (562)
..++++.|+....+ .+.+.++++.+ .+.+ +++++ +|.+.+.+.+++ +..++++.+..++. +++..||++|.
T Consensus 232 ~~v~v~~G~~~~~~-~~~~~~~~~~~-~~~~-~~~~~~~g~~~~~~~~~~----~~~~v~~~~~~~~~-~ll~~ad~~v~ 303 (402)
T 3ia7_A 232 PVLLVSLGNQFNEH-PEFFRACAQAF-ADTP-WHVVMAIGGFLDPAVLGP----LPPNVEAHQWIPFH-SVLAHARACLT 303 (402)
T ss_dssp CEEEEECCSCSSCC-HHHHHHHHHHH-TTSS-CEEEEECCTTSCGGGGCS----CCTTEEEESCCCHH-HHHTTEEEEEE
T ss_pred CEEEEECCCCCcch-HHHHHHHHHHH-hcCC-cEEEEEeCCcCChhhhCC----CCCcEEEecCCCHH-HHHhhCCEEEE
Confidence 45667888876554 23333333333 2333 66655 566545443332 33456666655555 99999999997
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEeeCC-C----C-ccccccCCceEeeC----CHHHHHHHHHHHHhCCCC--CccHHHH-
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCANH-P----S-NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPA--QPTDAQT- 418 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t~~-~----~-~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~--~l~~~ar- 418 (562)
.+ ...+++|||++|+|+|+... . . .+.+.+...|..++ |++++++++.++++|+.. ++++.++
T Consensus 304 ~~----G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~ 379 (402)
T 3ia7_A 304 HG----TTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAVRERVRRMQRD 379 (402)
T ss_dssp CC----CHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CC----CHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 65 24788999999999997654 2 2 66777778888764 899999999999998764 4444333
Q ss_pred --hcCCHHHHHHHHHHHHHh
Q 008544 419 --HQLSWESATERFLQVAEL 436 (562)
Q Consensus 419 --~~~sw~~~~~~~~~~y~~ 436 (562)
...+++.+++.+.+.++.
T Consensus 380 ~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 380 ILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HHTSCHHHHHHHHHHHHHHH
T ss_pred HhhCChHHHHHHHHHHHHhh
Confidence 667888999888887754
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.6e-12 Score=136.02 Aligned_cols=151 Identities=11% Similarity=0.012 Sum_probs=99.2
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEE-EeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEE
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDL-YGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLN 351 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i-vG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~ 351 (562)
..++++.|+.....+ +.+.++++.+ .+.+ +++++ +|.+.+.+.++ .+..++++.+..++ .+++..||++|.
T Consensus 248 ~~v~v~~Gs~~~~~~-~~~~~~~~al-~~~~-~~~v~~~g~~~~~~~l~----~~~~~v~~~~~~~~-~~ll~~ad~~v~ 319 (415)
T 3rsc_A 248 PVVLVSLGTTFNDRP-GFFRDCARAF-DGQP-WHVVMTLGGQVDPAALG----DLPPNVEAHRWVPH-VKVLEQATVCVT 319 (415)
T ss_dssp CEEEEECTTTSCCCH-HHHHHHHHHH-TTSS-CEEEEECTTTSCGGGGC----CCCTTEEEESCCCH-HHHHHHEEEEEE
T ss_pred CEEEEECCCCCCChH-HHHHHHHHHH-hcCC-cEEEEEeCCCCChHHhc----CCCCcEEEEecCCH-HHHHhhCCEEEE
Confidence 455667787754432 2222223222 3343 77777 56655544433 23335666655544 499999999997
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC----CHHHHHHHHHHHHhCCCC--CccHHHH--
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPA--QPTDAQT-- 418 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~--~l~~~ar-- 418 (562)
.+ -..+++|||++|+|+|+....+ .+.+.+...|..++ ++++++++|.++++|+.. .+.+.++
T Consensus 320 ~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~ 395 (415)
T 3rsc_A 320 HG----GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPALLARVEAMRGHV 395 (415)
T ss_dssp SC----CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CC----cHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 64 2468999999999999964432 56667777777763 889999999999998764 3433333
Q ss_pred -hcCCHHHHHHHHHHHHH
Q 008544 419 -HQLSWESATERFLQVAE 435 (562)
Q Consensus 419 -~~~sw~~~~~~~~~~y~ 435 (562)
....++.+++.+.+.++
T Consensus 396 ~~~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 396 RRAGGAARAADAVEAYLA 413 (415)
T ss_dssp HHSCHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHhh
Confidence 66778888887777664
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-12 Score=135.38 Aligned_cols=230 Identities=8% Similarity=-0.048 Sum_probs=133.3
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHh---
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVH--- 225 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 225 (562)
...+.+.+++.+||+||++..... +...++.++ |.+.+.++.... . .. ...+...+++...+..
T Consensus 96 ~~~l~~~l~~~~pD~Vi~~~~~~~-----~~~~a~~~giP~v~~~~~~~~~--~--~~---~~~~~~~~~~~~~~~g~~~ 163 (384)
T 2p6p_A 96 LPRMLDFSRAWRPDLIVGGTMSYV-----APLLALHLGVPHARQTWDAVDA--D--GI---HPGADAELRPELSELGLER 163 (384)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCTH-----HHHHHHHHTCCEEEECCSSCCC--T--TT---HHHHHHHTHHHHHHTTCSS
T ss_pred HHHHHHHHhccCCcEEEECcchhh-----HHHHHHhcCCCEEEeccCCccc--c--hh---hHHHHHHHHHHHHHcCCCC
Confidence 345667777889999998764322 223455555 887776643210 0 00 0112222222222321
Q ss_pred ---ccEEEEcChhhhccCCCccccccccCCCCcC-cchhhhHHhhcCCCCCccEEEEEeecccc-------CCHHHHHHH
Q 008544 226 ---CHKVIRLSAATQEYPNSIVCNVHGVNPKFLE-IGEKKMEQQQNGNKAFTKGAYYIGRMVWS-------KGYEELLGL 294 (562)
Q Consensus 226 ---ad~vi~~S~~~~~~~~~~~~~v~GVd~~~~~-~~~~~~~~~~~~~~~~~~~il~vGr~~~~-------Kg~~~ll~a 294 (562)
++.++..+....+.+.... ..+ +....+. +....... ...++...+++++|++... +.+..++++
T Consensus 164 ~~~~~~~l~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~l--~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~a 239 (384)
T 2p6p_A 164 LPAPDLFIDICPPSLRPANAAP-ARM-MRHVATSRQCPLEPWM--YTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKD 239 (384)
T ss_dssp CCCCSEEEECSCGGGSCTTSCC-CEE-CCCCCCCCCCBCCHHH--HCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHH
T ss_pred CCCCCeEEEECCHHHCCCCCCC-CCc-eEecCCCCCCCCCchh--hcCCCCCEEEEECCCCCccccccccHHHHHHHHHH
Confidence 4677777655443322110 000 1000011 00000000 0112224577888998765 567778887
Q ss_pred HHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEe
Q 008544 295 LNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVC 374 (562)
Q Consensus 295 ~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~ 374 (562)
+..+ ++++++++++++.+.++ .+..++.+ ++.+..++|..+|+||..+ .+.+++|||++|+|+|+
T Consensus 240 l~~~-----~~~~~~~~g~~~~~~l~----~~~~~v~~--~~~~~~~~l~~~d~~v~~~----G~~t~~Ea~~~G~P~v~ 304 (384)
T 2p6p_A 240 LVRW-----DVELIVAAPDTVAEALR----AEVPQARV--GWTPLDVVAPTCDLLVHHA----GGVSTLTGLSAGVPQLL 304 (384)
T ss_dssp HHTT-----TCEEEEECCHHHHHHHH----HHCTTSEE--ECCCHHHHGGGCSEEEECS----CTTHHHHHHHTTCCEEE
T ss_pred HhcC-----CcEEEEEeCCCCHHhhC----CCCCceEE--cCCCHHHHHhhCCEEEeCC----cHHHHHHHHHhCCCEEE
Confidence 7432 68888876543333333 23334566 4446789999999999863 45689999999999999
Q ss_pred eCCCC-----ccccccCCceEeeC----CHHHHHHHHHHHHhCCC
Q 008544 375 ANHPS-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEP 410 (562)
Q Consensus 375 t~~~~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~ 410 (562)
.+..+ .+.+.+...|+.++ ++++++++|.++++|+.
T Consensus 305 ~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~ 349 (384)
T 2p6p_A 305 IPKGSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKDT 349 (384)
T ss_dssp CCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCHH
T ss_pred ccCcccchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCHH
Confidence 97743 45566777788764 78999999999998754
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.32 E-value=5.2e-11 Score=125.87 Aligned_cols=149 Identities=11% Similarity=0.013 Sum_probs=104.0
Q ss_pred ccEEEEEeeccc-----cCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcC
Q 008544 273 TKGAYYIGRMVW-----SKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYK 347 (562)
Q Consensus 273 ~~~il~vGr~~~-----~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~ad 347 (562)
..++++.|++.. .|.+..+++++..+ ++++++.+.+++.+.++ .+..++.+.+..+ ..++|..||
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~~l~----~~~~~v~~~~~~~-~~~ll~~ad 337 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQLEGVA----NIPDNVRTVGFVP-MHALLPTCA 337 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTTTSSCS----SCCSSEEECCSCC-HHHHGGGCS
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcchhhhc----cCCCCEEEecCCC-HHHHHhhCC
Confidence 346778898865 37888888888432 68888877655433221 2233455555444 478999999
Q ss_pred EEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC----CHHHHHHHHHHHHhCCCC--CccHH
Q 008544 348 VFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPA--QPTDA 416 (562)
Q Consensus 348 v~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~--~l~~~ 416 (562)
++|.. +.+.+++|||++|+|+|+....+ .+.+.+...|+.++ ++++++++|.++++|+.. ++.+.
T Consensus 338 ~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~ 413 (441)
T 2yjn_A 338 ATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAGAARM 413 (441)
T ss_dssp EEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred EEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 99974 44689999999999999997753 55677777888764 889999999999998764 44443
Q ss_pred HH---hcCCHHHHHHHHHHHHH
Q 008544 417 QT---HQLSWESATERFLQVAE 435 (562)
Q Consensus 417 ar---~~~sw~~~~~~~~~~y~ 435 (562)
++ ....++.+++.+.+..+
T Consensus 414 ~~~~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 414 RDDMLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHH
Confidence 33 66788888888877764
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.2e-11 Score=128.10 Aligned_cols=241 Identities=12% Similarity=0.027 Sum_probs=147.7
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHH-HHHHHhcc
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNS-WLARVHCH 227 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ad 227 (562)
+..+.+++++.+||+|++++.....+. ...+.+.+ |++ .++.....+... +....++ ++.+. +|
T Consensus 83 ~~~l~~~l~~~kPD~Vlv~gd~~~~~a---alaA~~~~IPv~-h~eaglrs~~~~---------~pee~nR~~~~~~-a~ 148 (385)
T 4hwg_A 83 IEKVDEVLEKEKPDAVLFYGDTNSCLS---AIAAKRRKIPIF-HMEAGNRCFDQR---------VPEEINRKIIDHI-SD 148 (385)
T ss_dssp HHHHHHHHHHHCCSEEEEESCSGGGGG---HHHHHHTTCCEE-EESCCCCCSCTT---------STHHHHHHHHHHH-CS
T ss_pred HHHHHHHHHhcCCcEEEEECCchHHHH---HHHHHHhCCCEE-EEeCCCcccccc---------CcHHHHHHHHHhh-hc
Confidence 566888899999999999987655332 23444445 654 444332111100 0111122 23333 89
Q ss_pred EEEEcChhhhccC------CCccccc-c-ccCCCCcC--cchhhhHHhhcCCCCCccEEEEEeecc---ccCCHHHHHHH
Q 008544 228 KVIRLSAATQEYP------NSIVCNV-H-GVNPKFLE--IGEKKMEQQQNGNKAFTKGAYYIGRMV---WSKGYEELLGL 294 (562)
Q Consensus 228 ~vi~~S~~~~~~~------~~~~~~v-~-GVd~~~~~--~~~~~~~~~~~~~~~~~~~il~vGr~~---~~Kg~~~ll~a 294 (562)
.+++.++..++.. .+.+..+ + ++|...+. ...........++++...++++.+|.. ..|+++.++++
T Consensus 149 ~~~~~te~~~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~~~~iLvt~hr~e~~~~~~~l~~ll~a 228 (385)
T 4hwg_A 149 VNITLTEHARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPKQYFLISSHREENVDVKNNLKELLNS 228 (385)
T ss_dssp EEEESSHHHHHHHHHTTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCTTSEEEEEECCC-----CHHHHHHHHH
T ss_pred eeecCCHHHHHHHHHcCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCcCCEEEEEeCCchhcCcHHHHHHHHHH
Confidence 9999998877632 2222222 1 23321111 011222344566655444555566543 34788999999
Q ss_pred HHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhc-C-----CeeEEeCC--CCChHHHHhhcCEEEEccCCCCCcHHHHHHH
Q 008544 295 LNIYHKELAGLEMDLYGNGEDFDQIQRAAKKL-K-----LVVRVYPG--RDHADPIFHDYKVFLNPSTTDVVCTATAEAL 366 (562)
Q Consensus 295 ~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l-~-----l~~~~~~~--~~~~~~l~~~adv~v~pS~~E~~~~~~lEAm 366 (562)
+.++.++. ++.+++... + .+++.+++. + .++.++.+ +.+...+|+.||+++.+| |..+.||+
T Consensus 229 l~~l~~~~-~~~vv~p~~-p---~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~ 298 (385)
T 4hwg_A 229 LQMLIKEY-NFLIIFSTH-P---RTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS-----GTITEEAS 298 (385)
T ss_dssp HHHHHHHH-CCEEEEEEC-H---HHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC-----TTHHHHHH
T ss_pred HHHHHhcC-CeEEEEECC-h---HHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC-----ccHHHHHH
Confidence 99998766 787777553 2 345555544 2 23555544 335668999999999777 44679999
Q ss_pred HcCCcEEeeCCCC--ccccccCCceEeeC-CHHHHHHHHHHHHhCCCC--CccH
Q 008544 367 AMGKIVVCANHPS--NDFFKQFPNCRTYD-GRNGFVEATLKALAEEPA--QPTD 415 (562)
Q Consensus 367 a~G~PVI~t~~~~--~e~v~~~~~g~~~~-d~~~la~~i~~ll~~~~~--~l~~ 415 (562)
++|+|+|+.+... .|.+..| ++.+++ |++++++++.++++|+.. .|++
T Consensus 299 alG~Pvv~~~~~ter~e~v~~G-~~~lv~~d~~~i~~ai~~ll~d~~~~~~m~~ 351 (385)
T 4hwg_A 299 ILNLPALNIREAHERPEGMDAG-TLIMSGFKAERVLQAVKTITEEHDNNKRTQG 351 (385)
T ss_dssp HTTCCEEECSSSCSCTHHHHHT-CCEECCSSHHHHHHHHHHHHTTCBTTBCCSC
T ss_pred HcCCCEEEcCCCccchhhhhcC-ceEEcCCCHHHHHHHHHHHHhChHHHHHhhc
Confidence 9999999986643 6777665 566664 999999999999999875 5644
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.21 E-value=2e-09 Score=112.94 Aligned_cols=150 Identities=12% Similarity=0.034 Sum_probs=95.9
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEE-EEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEE
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMD-LYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLN 351 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~-ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~ 351 (562)
..++++.|+.. .+..+.+.+++..+.+ .+++++ ++|.+.+.+.++ .+..++.+.+...+. ++|..+|++|.
T Consensus 256 ~~v~v~~Gs~~-~~~~~~~~~~~~al~~--~~~~~~~~~g~~~~~~~~~----~~~~~v~~~~~~~~~-~~l~~~d~~v~ 327 (424)
T 2iya_A 256 PVLLIALGSAF-TDHLDFYRTCLSAVDG--LDWHVVLSVGRFVDPADLG----EVPPNVEVHQWVPQL-DILTKASAFIT 327 (424)
T ss_dssp CEEEEECCSSS-CCCHHHHHHHHHHHTT--CSSEEEEECCTTSCGGGGC----SCCTTEEEESSCCHH-HHHTTCSEEEE
T ss_pred CEEEEEcCCCC-cchHHHHHHHHHHHhc--CCcEEEEEECCcCChHHhc----cCCCCeEEecCCCHH-HHHhhCCEEEE
Confidence 45666778876 3444444444444432 467774 467765443332 233346666655444 89999999986
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC----CHHHHHHHHHHHHhCCCC--CccHHHH--
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPA--QPTDAQT-- 418 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~--~l~~~ar-- 418 (562)
. +...+++|||++|+|+|+....+ .+.+.+...|+.++ ++++++++|.++++|+.. ++.+.++
T Consensus 328 ~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~ 403 (424)
T 2iya_A 328 H----AGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGVAERLAAVRQEI 403 (424)
T ss_dssp C----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred C----CchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 4 33589999999999999997753 45566667777764 899999999999998753 2222222
Q ss_pred -hcCCHHHHHHHHHHHH
Q 008544 419 -HQLSWESATERFLQVA 434 (562)
Q Consensus 419 -~~~sw~~~~~~~~~~y 434 (562)
.....+.+++.+.+..
T Consensus 404 ~~~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 404 REAGGARAAADILEGIL 420 (424)
T ss_dssp HTSCHHHHHHHHHHHHH
T ss_pred HhcCcHHHHHHHHHHHH
Confidence 3344555555555443
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=5.6e-11 Score=123.49 Aligned_cols=127 Identities=17% Similarity=0.098 Sum_probs=80.2
Q ss_pred ccEEEEEeeccccCC-HHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEE
Q 008544 273 TKGAYYIGRMVWSKG-YEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLN 351 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg-~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~ 351 (562)
..+++..|++...++ .+.+.+++..+.+ .+.++++.+.+.+.+.. ..+.-++.+ .++.+..+++..+|+||.
T Consensus 238 ~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~----~~~~~~v~~-~~~~p~~~lL~~~~~~v~ 310 (400)
T 4amg_A 238 RRIAVTLGSIDALSGGIAKLAPLFSEVAD--VDAEFVLTLGGGDLALL----GELPANVRV-VEWIPLGALLETCDAIIH 310 (400)
T ss_dssp CEEEECCCSCC--CCSSSTTHHHHHHGGG--SSSEEEEECCTTCCCCC----CCCCTTEEE-ECCCCHHHHHTTCSEEEE
T ss_pred cEEEEeCCcccccCccHHHHHHHHHHhhc--cCceEEEEecCcccccc----ccCCCCEEE-EeecCHHHHhhhhhheec
Confidence 345556677655443 3444444444433 35777776654432211 112223333 445567899999999984
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeCCHHHHHHHHHHHHhCCC
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYDGRNGFVEATLKALAEEP 410 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~ 410 (562)
- +...+++|||++|+|+|+....+ .+.+.+...|...++.+..+++|.++++|+.
T Consensus 311 h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~al~~lL~d~~ 370 (400)
T 4amg_A 311 H----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGSLGAEQCRRLLDDAG 370 (400)
T ss_dssp C----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTTTCSHHHHHHHHHCHH
T ss_pred c----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCCCchHHHHHHHHcCHH
Confidence 3 45678999999999999976543 4556666778877777778889999999865
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=2.4e-09 Score=111.73 Aligned_cols=147 Identities=10% Similarity=-0.014 Sum_probs=96.2
Q ss_pred ccEEEEEeecc-ccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEE
Q 008544 273 TKGAYYIGRMV-WSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLN 351 (562)
Q Consensus 273 ~~~il~vGr~~-~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~ 351 (562)
..++++.|++. ..+.+..+++++..+ ++++++.+++.+.+.. ....++.+.+ +.+..+++..+|++|.
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~vv~~~g~~~~~~~-----~~~~~v~~~~-~~~~~~ll~~~d~~v~ 290 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRRVVLSSGWAGLGRI-----DEGDDCLVVG-EVNHQVLFGRVAAVVH 290 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHT-----TCCEEEECTTTTCCCS-----SCCTTEEEES-SCCHHHHGGGSSEEEE
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhC-----CCEEEEEeCCcccccc-----cCCCCEEEec-CCCHHHHHhhCcEEEE
Confidence 45667778887 566677777777543 5677776543322111 1233455554 4556899999999996
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC----CHHHHHHHHHHHHhCCCC--CccHHHH--
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPA--QPTDAQT-- 418 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~--~l~~~ar-- 418 (562)
.+ -..++.|||++|+|+|+....+ .+.+.+...|...+ +++++.+++.++++ +.. .+.+.+.
T Consensus 291 ~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~ 365 (404)
T 3h4t_A 291 HG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT-PGIRARAAAVAGTI 365 (404)
T ss_dssp CC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS-HHHHHHHHHHHTTC
T ss_pred CC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence 54 3478999999999999986654 34456666777653 89999999999997 432 3333333
Q ss_pred hcCCHHHHHHHHHHHHH
Q 008544 419 HQLSWESATERFLQVAE 435 (562)
Q Consensus 419 ~~~sw~~~~~~~~~~y~ 435 (562)
..-.++.+++.+++.++
T Consensus 366 ~~~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 366 RTDGTTVAAKLLLEAIS 382 (404)
T ss_dssp CCCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHh
Confidence 22456666666666654
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.97 E-value=7.1e-10 Score=118.95 Aligned_cols=263 Identities=10% Similarity=-0.043 Sum_probs=150.8
Q ss_pred HhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEE
Q 008544 151 GDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVI 230 (562)
Q Consensus 151 ~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 230 (562)
..+.+.|++.++||.+--+......- ......+..|+-.++-+ |+. ..+.. . .|.+|
T Consensus 339 ~~ia~~Ir~d~IDILVdL~g~t~~~~--i~~aa~RpAPVQvs~lG-yp~---TTGl~---------------~--iDY~i 395 (631)
T 3q3e_A 339 EFIRSVCESNGAAIFYMPSIGMDMTT--IFASNTRLAPIQAIALG-HPA---TTHSD---------------F--IEYVI 395 (631)
T ss_dssp HHHHHHHHHHTCSEEEESCCSSSHHH--HHHTTSCCSSEEEEECS-SCS---CCCCT---------------T--CCEEE
T ss_pred HHHHHHHHhcCCCEEEECCCCCCchh--HHHHhCCCchheEeccC-CCc---ccCcc---------------c--CCEEE
Confidence 34778888999999887544332111 01112343477666653 221 11111 1 37766
Q ss_pred EcChh--hhccCCCccccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEE
Q 008544 231 RLSAA--TQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMD 308 (562)
Q Consensus 231 ~~S~~--~~~~~~~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ 308 (562)
+-... ..+...+++....+.- -.+.|......+...+++.+.-.++|.+--...|..+.+++++.++.++.|+..++
T Consensus 396 ~D~~~~~~~~~ysEklirLP~~~-~~~~p~~~~p~r~~~~lp~~~G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~ 474 (631)
T 3q3e_A 396 VEDDYVGSEECFSETLLRLPKDA-LPYVPSALAPEKVDYLLRENPEVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHF 474 (631)
T ss_dssp EEGGGCCCGGGCSSEEEEECTTS-SCCCCCTTCCSSCCCCCCSCCSEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEE
T ss_pred eCCCCCCcccCceeeEEECCCCc-cccCCcccCCccccccCCcCCCeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEE
Confidence 64311 1223333333332110 01111111111233455543123333333346899999999999999999997765
Q ss_pred E--EeCCCC-HHHHHHHHHhcCCe--eEEeCCCCChH--HHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-c
Q 008544 309 L--YGNGED-FDQIQRAAKKLKLV--VRVYPGRDHAD--PIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-N 380 (562)
Q Consensus 309 i--vG~g~~-~~~l~~~~~~l~l~--~~~~~~~~~~~--~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~ 380 (562)
+ +|.++. .+.+.+.+.+.|+. +.|.+.....+ +.|+.+|+|+.|+.+.+ |++.+|||+||+|||+...++ .
T Consensus 475 l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~a 553 (631)
T 3q3e_A 475 HFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVH 553 (631)
T ss_dssp EEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHH
T ss_pred EEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHH
Confidence 3 564322 23333344455553 44555444333 77899999999987755 999999999999999986654 2
Q ss_pred ccc------ccCCceE-eeCCHHHHHHHHHHHHhCCCC--CccHHHHhcC----CHHHHHHHHHHHHHhcC
Q 008544 381 DFF------KQFPNCR-TYDGRNGFVEATLKALAEEPA--QPTDAQTHQL----SWESATERFLQVAELVG 438 (562)
Q Consensus 381 e~v------~~~~~g~-~~~d~~~la~~i~~ll~~~~~--~l~~~ar~~~----sw~~~~~~~~~~y~~~~ 438 (562)
.-+ .-|-..+ +.+|.+++++...++.+|++. .++++.++.. -|+...++|.+.|+...
T Consensus 554 sRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La~D~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~ 624 (631)
T 3q3e_A 554 EHIDEGLFKRLGLPEWLIANTVDEYVERAVRLAENHQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKL 624 (631)
T ss_dssp HHHHHHHHHHTTCCGGGEESSHHHHHHHHHHHHHCHHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHH
T ss_pred HHhHHHHHHhcCCCcceecCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHH
Confidence 222 1344453 678999999999999999986 6777666221 12244556666666544
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.77 E-value=2.2e-07 Score=97.04 Aligned_cols=147 Identities=10% Similarity=-0.017 Sum_probs=93.1
Q ss_pred ccEEEEEeec-cccCCHHHHHHHHHHHHHhcCCcEEEEE-eCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEE
Q 008544 273 TKGAYYIGRM-VWSKGYEELLGLLNIYHKELAGLEMDLY-GNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFL 350 (562)
Q Consensus 273 ~~~il~vGr~-~~~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v 350 (562)
..++++.|++ ...+..+.++++++.+ +.+++++ |.++.. . ..+..++.+.+.. +..+++..+|+||
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~--~----~~~~~~v~~~~~~-~~~~~l~~~d~~v 306 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH-----GRRVILSRGWADLV--L----PDDGADCFAIGEV-NHQVLFGRVAAVI 306 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT-----TCCEEECTTCTTCC--C----SSCGGGEEECSSC-CHHHHGGGSSEEE
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC-----CCeEEEEeCCCccc--c----cCCCCCEEEeCcC-ChHHHHhhCCEEE
Confidence 4567788888 4777778888887543 3456555 654322 1 1122234554444 4568899999999
Q ss_pred EccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC----CHHHHHHHHHHHHhCCCC--CccHHHHh
Q 008544 351 NPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPA--QPTDAQTH 419 (562)
Q Consensus 351 ~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~--~l~~~ar~ 419 (562)
.. +...+++|||++|+|+|+....+ .+.+.+...|..++ +.++++++|.++ +|+.. ++.+.+ +
T Consensus 307 ~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~-~ 380 (415)
T 1iir_A 307 HH----GGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-LTPETHARATAVA-G 380 (415)
T ss_dssp EC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-TSHHHHHHHHHHH-H
T ss_pred eC----CChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-cCHHHHHHHHHHH-H
Confidence 75 33579999999999999997643 45566667787763 889999999999 76542 222222 3
Q ss_pred cCCHHHHHHHHHHHHHhc
Q 008544 420 QLSWESATERFLQVAELV 437 (562)
Q Consensus 420 ~~sw~~~~~~~~~~y~~~ 437 (562)
.+......++..+..+..
T Consensus 381 ~~~~~~~~~~~~~~i~~~ 398 (415)
T 1iir_A 381 TIRTDGAAVAARLLLDAV 398 (415)
T ss_dssp HSCSCHHHHHHHHHHHHH
T ss_pred HHhhcChHHHHHHHHHHH
Confidence 333444555555544443
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.75 E-value=2.5e-07 Score=96.65 Aligned_cols=121 Identities=8% Similarity=-0.050 Sum_probs=82.5
Q ss_pred ccEEEEEeecc---ccCCHHHHHHHHHHHHHhcCCcEEEEE-eCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCE
Q 008544 273 TKGAYYIGRMV---WSKGYEELLGLLNIYHKELAGLEMDLY-GNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKV 348 (562)
Q Consensus 273 ~~~il~vGr~~---~~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv 348 (562)
..++++.|++. ..+.++.+++++..+ +.+++++ |.++.. . ..+..++.+.+.. +..+++..+|+
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~--~----~~~~~~v~~~~~~-~~~~ll~~~d~ 305 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRRVILSRGWTELV--L----PDDRDDCFAIDEV-NFQALFRRVAA 305 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCCEEEECTTTTCC--C----SCCCTTEEEESSC-CHHHHGGGSSE
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC-----CCeEEEEeCCcccc--c----cCCCCCEEEeccC-ChHHHhccCCE
Confidence 45666778874 455666677776443 4566665 654321 1 1223345555444 57789999999
Q ss_pred EEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC----CHHHHHHHHHHHHhCCC
Q 008544 349 FLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEP 410 (562)
Q Consensus 349 ~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~ 410 (562)
+|.- +...+++|||++|+|+|+....+ .+.+.+...|..++ +.++++++|.++ +|+.
T Consensus 306 ~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~ 371 (416)
T 1rrv_A 306 VIHH----GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-LAPE 371 (416)
T ss_dssp EEEC----CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSHH
T ss_pred EEec----CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCHH
Confidence 9973 44679999999999999986643 44566667777653 889999999999 7654
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=7.8e-08 Score=105.32 Aligned_cols=168 Identities=13% Similarity=0.030 Sum_probs=116.5
Q ss_pred CCCccEEEEEeeccccCCHHH-HHHHHHHHHH--hc-----CCcEEEEEeCCCC--HHH------HHHHHH------hcC
Q 008544 270 KAFTKGAYYIGRMVWSKGYEE-LLGLLNIYHK--EL-----AGLEMDLYGNGED--FDQ------IQRAAK------KLK 327 (562)
Q Consensus 270 ~~~~~~il~vGr~~~~Kg~~~-ll~a~~~l~~--~~-----~~~~l~ivG~g~~--~~~------l~~~~~------~l~ 327 (562)
.++.+.++++.|+..+||.++ ++..+.++.+ .. .++++++.|.+.. ... +.+.++ +.+
T Consensus 523 dpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~ 602 (796)
T 1l5w_A 523 NPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVG 602 (796)
T ss_dssp CTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTG
T ss_pred CCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccC
Confidence 456889999999999999999 8888887754 12 3589999998753 222 444444 233
Q ss_pred C--eeEEeCCCCChH--HHHhhcCEEEEccC--CCCCcHHHHHHHHcCCcEEeeCCCC-cccccc--CCceEeeC-CHHH
Q 008544 328 L--VVRVYPGRDHAD--PIFHDYKVFLNPST--TDVVCTATAEALAMGKIVVCANHPS-NDFFKQ--FPNCRTYD-GRNG 397 (562)
Q Consensus 328 l--~~~~~~~~~~~~--~l~~~adv~v~pS~--~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~--~~~g~~~~-d~~~ 397 (562)
. ++.|+.+++..- .++..||++++||+ .|..|+.-+=||..|.+.|.+--|. .|+.+. ..|||++. ++++
T Consensus 603 ~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~e 682 (796)
T 1l5w_A 603 DKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQ 682 (796)
T ss_dssp GGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHH
T ss_pred CceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCCCcEEEecCCHHH
Confidence 3 455666654333 89999999999999 9999999999999999999886665 555433 47999986 6666
Q ss_pred HHHHHH-------HHHhCCCC-CccHHHH-hcCCHHHHHHHHHHHHHhcC
Q 008544 398 FVEATL-------KALAEEPA-QPTDAQT-HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 398 la~~i~-------~ll~~~~~-~l~~~ar-~~~sw~~~~~~~~~~y~~~~ 438 (562)
+.+.-. -.-.++.. ++-.+.. ..|||+.. ++|.++|+...
T Consensus 683 v~~l~~~~y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~ 731 (796)
T 1l5w_A 683 VKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDK-HAFDQMLHSIG 731 (796)
T ss_dssp HHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTTTTCT-TTTHHHHHHTS
T ss_pred HHHHHHcccCHHHHhhcCHHHHHHHHHHHcCCCCCCcH-HHHHHHHHHHh
Confidence 653221 11122211 2222222 78899875 77888888765
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.73 E-value=2.2e-08 Score=90.91 Aligned_cols=121 Identities=15% Similarity=0.132 Sum_probs=89.5
Q ss_pred ccEEEEEeecc---ccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHH--hhcC
Q 008544 273 TKGAYYIGRMV---WSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIF--HDYK 347 (562)
Q Consensus 273 ~~~il~vGr~~---~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~--~~ad 347 (562)
..+++++|++. +.|.+..+++++.. . +.++++++++...+ .+..++++.+..++ .+++ ..||
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~----~-~~~~~~~~g~~~~~-------~~~~~v~~~~~~~~-~~~l~~~~ad 88 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQ----I-PQKVLWRFDGNKPD-------TLGLNTRLYKWIPQ-NDLLGHPKTR 88 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTT----S-SSEEEEECCSSCCT-------TCCTTEEEESSCCH-HHHHTSTTEE
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHh----C-CCeEEEEECCcCcc-------cCCCcEEEecCCCH-HHHhcCCCcC
Confidence 45778889885 56677777777732 2 47888877665322 23334666655544 6777 8999
Q ss_pred EEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC----CHHHHHHHHHHHHhCCC
Q 008544 348 VFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEP 410 (562)
Q Consensus 348 v~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~ 410 (562)
++|.. +.+.+++|||++|+|+|+....+ .+.+.+...|+.++ ++++++++|.++++|+.
T Consensus 89 ~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~ 156 (170)
T 2o6l_A 89 AFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDPS 156 (170)
T ss_dssp EEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCHH
T ss_pred EEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCHH
Confidence 99974 44699999999999999998753 56677778888875 88999999999998754
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.72 E-value=2.9e-07 Score=100.89 Aligned_cols=169 Identities=13% Similarity=0.029 Sum_probs=116.9
Q ss_pred CCCCccEEEEEeeccccCCHHH-HHHHHHHHHH--hc-----CCcEEEEEeCCCC--HHH------HHHHHH------hc
Q 008544 269 NKAFTKGAYYIGRMVWSKGYEE-LLGLLNIYHK--EL-----AGLEMDLYGNGED--FDQ------IQRAAK------KL 326 (562)
Q Consensus 269 ~~~~~~~il~vGr~~~~Kg~~~-ll~a~~~l~~--~~-----~~~~l~ivG~g~~--~~~------l~~~~~------~l 326 (562)
..++.+.++++.|+..+||.++ ++..+.++.+ +. .++++++.|.+.. ... +.+.++ +.
T Consensus 512 vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~ 591 (796)
T 2c4m_A 512 IDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEV 591 (796)
T ss_dssp CCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTT
T ss_pred CCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhcccccc
Confidence 3456889999999999999999 8888887764 33 3589999998753 222 444444 34
Q ss_pred CC--eeEEeCCCCChH--HHHhhcCEEEEccC--CCCCcHHHHHHHHcCCcEEeeCCCC-cccccc--CCceEeeC----
Q 008544 327 KL--VVRVYPGRDHAD--PIFHDYKVFLNPST--TDVVCTATAEALAMGKIVVCANHPS-NDFFKQ--FPNCRTYD---- 393 (562)
Q Consensus 327 ~l--~~~~~~~~~~~~--~l~~~adv~v~pS~--~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~--~~~g~~~~---- 393 (562)
+. ++.|+.+++..- .++..||++++||+ .|..|+.-+=||..|.+.|.+--|. .|+.+. ..|||++.
T Consensus 592 ~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ 671 (796)
T 2c4m_A 592 SPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVE 671 (796)
T ss_dssp TTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCCTT
T ss_pred CCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecCchh
Confidence 43 566666655333 89999999999999 9999999999999999999886665 454433 47999985
Q ss_pred CHHHHHHH---HHHHHhCCCC-CccHHHH-hcCCHHHHHHHHHHHHHhcC
Q 008544 394 GRNGFVEA---TLKALAEEPA-QPTDAQT-HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 394 d~~~la~~---i~~ll~~~~~-~l~~~ar-~~~sw~~~~~~~~~~y~~~~ 438 (562)
++.++... ..-.-.++.. ++-.+.. ..|||+.. ++|.++|+...
T Consensus 672 ev~~l~~~y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~ 720 (796)
T 2c4m_A 672 ELPALRESYKPYELYETVPGLKRALDALDNGTLNDNNS-GLFYDLKHSLI 720 (796)
T ss_dssp THHHHHHTCCHHHHHHHSTTHHHHHHTTTSSSSCCTTC-CHHHHHHHHHH
T ss_pred hHHHHHHhhChHHHhhcCHHHHHHHHHHHcCCCCCCCH-HHHHHHHHHHH
Confidence 44444432 2222233321 1111112 68999876 77888888764
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=8.4e-06 Score=80.05 Aligned_cols=187 Identities=11% Similarity=0.083 Sum_probs=104.8
Q ss_pred hHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEE
Q 008544 152 DITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIR 231 (562)
Q Consensus 152 ~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~ 231 (562)
++.+.+++.++|++++-+......+ ...++......+..+-+.. . ...||.+|-
T Consensus 60 ~~~~~l~~~~~d~lIvD~Y~~~~~~--~~~lk~~~~~~i~~iDD~~-~-----------------------~~~~Dllin 113 (282)
T 3hbm_A 60 ELINLIKEEKFELLIIDHYGISVDD--EKLIKLETGVKILSFDDEI-K-----------------------PHHCDILLN 113 (282)
T ss_dssp HHHHHHHHHTCSEEEEECTTCCHHH--HHHHHHHHCCEEEEECSSC-C-----------------------CCCCSEEEE
T ss_pred HHHHHHHhCCCCEEEEECCCCCHHH--HHHHHHhcCcEEEEEecCC-C-----------------------cccCCEEEe
Confidence 3556666778999988766444222 1223333344444443221 1 012799998
Q ss_pred cChhhh--ccCC---CccccccccCCCCcCcchhhhHHhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcE
Q 008544 232 LSAATQ--EYPN---SIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLE 306 (562)
Q Consensus 232 ~S~~~~--~~~~---~~~~~v~GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~ 306 (562)
.+.... .+.. ......-|.+...+.+.-.. ..+........++++.|......-...+++++. + ... -
T Consensus 114 ~~~~~~~~~Y~~~~p~~~~~l~G~~Y~~lR~eF~~--~~~~~r~~~~~ILv~~GG~d~~~l~~~vl~~L~---~-~~~-i 186 (282)
T 3hbm_A 114 VNAYAKASDYEGLVPFKCEVRCGFSYALIREEFYQ--EAKENRKKKYDFFICMGGTDIKNLSLQIASELP---K-TKI-I 186 (282)
T ss_dssp CSTTCCGGGGTTTCC-CCEEEESGGGCCCCHHHHH--HTTCCCCCCEEEEEECCSCCTTCHHHHHHHHSC---T-TSC-E
T ss_pred CCcccchhhccccCCCCCeEeeCCcccccCHHHHH--hhhhccccCCeEEEEECCCchhhHHHHHHHHhh---c-CCC-E
Confidence 763322 2221 11111224433333221111 111111122345667887655443344555542 2 223 3
Q ss_pred EEEEeCCCC-HHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCC
Q 008544 307 MDLYGNGED-FDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANH 377 (562)
Q Consensus 307 l~ivG~g~~-~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~ 377 (562)
.++.|.+.. .+++++.+++.+ ++.+++..+++.++|+.||+.|.+. |+++.|++++|+|.|.-..
T Consensus 187 ~vv~G~~~~~~~~l~~~~~~~~-~v~v~~~~~~m~~~m~~aDlvI~~g-----G~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 187 SIATSSSNPNLKKLQKFAKLHN-NIRLFIDHENIAKLMNESNKLIISA-----SSLVNEALLLKANFKAICY 252 (282)
T ss_dssp EEEECTTCTTHHHHHHHHHTCS-SEEEEESCSCHHHHHHTEEEEEEES-----SHHHHHHHHTTCCEEEECC
T ss_pred EEEECCCchHHHHHHHHHhhCC-CEEEEeCHHHHHHHHHHCCEEEECC-----cHHHHHHHHcCCCEEEEeC
Confidence 455677654 677887776544 6888888999999999999999842 5899999999999988654
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=98.17 E-value=7.9e-06 Score=89.95 Aligned_cols=167 Identities=10% Similarity=0.025 Sum_probs=113.7
Q ss_pred CCCccEEEEEeeccccCCHHHH-HHHHHHHHH--hcC-----CcEEEEEeCCCC--HHH------HHHHHHhc------C
Q 008544 270 KAFTKGAYYIGRMVWSKGYEEL-LGLLNIYHK--ELA-----GLEMDLYGNGED--FDQ------IQRAAKKL------K 327 (562)
Q Consensus 270 ~~~~~~il~vGr~~~~Kg~~~l-l~a~~~l~~--~~~-----~~~l~ivG~g~~--~~~------l~~~~~~l------~ 327 (562)
.++.+.++++.|+..+|+.+++ +..+.++.+ +.| +.++++.|.+.. ... +.+.++.. +
T Consensus 547 dpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~ 626 (824)
T 2gj4_A 547 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp CTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTG
T ss_pred CCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccC
Confidence 4568899999999999999997 788877742 333 579999998753 222 44444433 2
Q ss_pred C--eeEEeCCCCChH--HHHhhcCEEEEccC--CCCCcHHHHHHHHcCCcEEeeCCCC-ccccc--cCCceEeeC-CHHH
Q 008544 328 L--VVRVYPGRDHAD--PIFHDYKVFLNPST--TDVVCTATAEALAMGKIVVCANHPS-NDFFK--QFPNCRTYD-GRNG 397 (562)
Q Consensus 328 l--~~~~~~~~~~~~--~l~~~adv~v~pS~--~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~--~~~~g~~~~-d~~~ 397 (562)
. ++.|+.+++..- .++..||++++||+ .|..|+.-+=||..|.+.|++--|. .|+.+ ...|||++. .+++
T Consensus 627 ~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~~~e 706 (824)
T 2gj4_A 627 DRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVED 706 (824)
T ss_dssp GGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHH
T ss_pred CceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeCCcHHH
Confidence 2 456666655333 89999999999999 9999999999999999999986665 45543 457899986 5666
Q ss_pred HHHHHH-------HHHhCCCC--CccHHHH-hcCCHHHHHHHHHHHHHhcC
Q 008544 398 FVEATL-------KALAEEPA--QPTDAQT-HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 398 la~~i~-------~ll~~~~~--~l~~~ar-~~~sw~~~~~~~~~~y~~~~ 438 (562)
+ .++. .+.+.++. ++-.+.. ..|+|+.. ++|.++|+...
T Consensus 707 v-~~l~~~~~~a~~~Y~~~~~l~~v~d~i~~g~fs~~~~-~~y~~ly~~l~ 755 (824)
T 2gj4_A 707 V-DRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQP-DLFKDIVNMLM 755 (824)
T ss_dssp H-HHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTCTTST-TTTHHHHHHHH
T ss_pred H-HHHHHcCCCHHHHhcCCHHHHHHHHHHHhCCCCCCCh-HHHHHHHHHHH
Confidence 5 4432 11111111 1111122 67888776 66777776553
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=2.6e-05 Score=86.95 Aligned_cols=171 Identities=12% Similarity=-0.071 Sum_probs=122.9
Q ss_pred HhhcCCCCCccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCC-HHHHHHHHHhcCCe---eEEeCCCCCh
Q 008544 264 QQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGED-FDQIQRAAKKLKLV---VRVYPGRDHA 339 (562)
Q Consensus 264 ~~~~~~~~~~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~-~~~l~~~~~~l~l~---~~~~~~~~~~ 339 (562)
+...+++++..++... -...|=-+.+++++.++.++.|+.+|++...... .+.+++.+++.|+. +.|.+ ....
T Consensus 514 R~~~gLp~~~v~f~~f--N~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~-~~~~ 590 (723)
T 4gyw_A 514 RSQYGLPEDAIVYCNF--NQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSP-VAPK 590 (723)
T ss_dssp GGGGTCCTTSEEEECC--SCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEE-CCCH
T ss_pred hhhcCCCCCCEEEEeC--CccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECC-CCCH
Confidence 4556777766443333 3457778899999999999999999999886543 67888888888876 44433 3333
Q ss_pred H---HHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC------ccccc-cCCceEeeCCHHHHHHHHHHHHhCC
Q 008544 340 D---PIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS------NDFFK-QFPNCRTYDGRNGFVEATLKALAEE 409 (562)
Q Consensus 340 ~---~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~------~e~v~-~~~~g~~~~d~~~la~~i~~ll~~~ 409 (562)
. ..|+.+|+++-|-.+ +-+++.+||++||+|||+-.... ..++. -|-.-++..|.+++.+.-.++.+|+
T Consensus 591 ~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~~~~~Y~~~a~~la~d~ 669 (723)
T 4gyw_A 591 EEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKLGTDL 669 (723)
T ss_dssp HHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHHCH
T ss_pred HHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccCCHHHHHHHHHHHhcCH
Confidence 3 667789999988666 45899999999999999985432 12221 1233356689999999999999988
Q ss_pred CC--CccHHHH------hcCCHHHHHHHHHHHHHhcC
Q 008544 410 PA--QPTDAQT------HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 410 ~~--~l~~~ar------~~~sw~~~~~~~~~~y~~~~ 438 (562)
+. .++++-+ .-|+-...++.+.++|+.+-
T Consensus 670 ~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w 706 (723)
T 4gyw_A 670 EYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMW 706 (723)
T ss_dssp HHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHH
Confidence 75 4444332 35788888888888887765
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.051 Score=57.36 Aligned_cols=76 Identities=9% Similarity=-0.019 Sum_probs=53.7
Q ss_pred EeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----cccc-ccCCceEeeC-------CHHHH
Q 008544 332 VYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFF-KQFPNCRTYD-------GRNGF 398 (562)
Q Consensus 332 ~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v-~~~~~g~~~~-------d~~~l 398 (562)
+..++.+..++++.+++-++=+. +--.+++||+++|+|+|+-...+ ...+ +.-..|...+ +.+++
T Consensus 342 ~v~~w~Pq~~vL~h~~v~~fvtH--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l 419 (480)
T 2vch_A 342 VIPFWAPQAQVLAHPSTGGFLTH--CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEV 419 (480)
T ss_dssp EEESCCCHHHHHHSTTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHH
T ss_pred EEeCccCHHHHhCCCCcCeEEec--ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHH
Confidence 44445566699998885333332 44678999999999999987654 3343 4556666541 68999
Q ss_pred HHHHHHHHhCC
Q 008544 399 VEATLKALAEE 409 (562)
Q Consensus 399 a~~i~~ll~~~ 409 (562)
.++|.++++++
T Consensus 420 ~~av~~vl~~~ 430 (480)
T 2vch_A 420 ARVVKGLMEGE 430 (480)
T ss_dssp HHHHHHHHTST
T ss_pred HHHHHHHhcCc
Confidence 99999999754
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.37 E-value=0.01 Score=59.56 Aligned_cols=106 Identities=17% Similarity=0.163 Sum_probs=67.3
Q ss_pred hcCCCCCc-cEEEEEee-ccccCCH--HHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcC----CeeEEeCCCC
Q 008544 266 QNGNKAFT-KGAYYIGR-MVWSKGY--EELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLK----LVVRVYPGRD 337 (562)
Q Consensus 266 ~~~~~~~~-~~il~vGr-~~~~Kg~--~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~----l~~~~~~~~~ 337 (562)
..+..... .+++..|. ..+.|.+ +.+.+++..+.++ ++++++.|...+.+..++..+..+ .++..+.+..
T Consensus 173 ~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~ 250 (348)
T 1psw_A 173 QFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGET 250 (348)
T ss_dssp HTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTS
T ss_pred HhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcC
Confidence 34444233 45566666 4456665 4888888888765 789999987666555555544332 1243444433
Q ss_pred ---ChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCC
Q 008544 338 ---HADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHP 378 (562)
Q Consensus 338 ---~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~ 378 (562)
+..++++.||++|... + |..-+ |.|+|+|+|+--.+
T Consensus 251 sl~e~~ali~~a~l~I~~D---s-g~~Hl-Aaa~g~P~v~lfg~ 289 (348)
T 1psw_A 251 QLDQAVILIAACKAIVTND---S-GLMHV-AAALNRPLVALYGP 289 (348)
T ss_dssp CHHHHHHHHHTSSEEEEES---S-HHHHH-HHHTTCCEEEEESS
T ss_pred CHHHHHHHHHhCCEEEecC---C-HHHHH-HHHcCCCEEEEECC
Confidence 3448899999999874 2 33333 99999999987443
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.037 Score=55.82 Aligned_cols=158 Identities=12% Similarity=0.139 Sum_probs=91.2
Q ss_pred cCCCCCcc-EEEEEeeccccCCH--HHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCC---hH
Q 008544 267 NGNKAFTK-GAYYIGRMVWSKGY--EELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDH---AD 340 (562)
Q Consensus 267 ~~~~~~~~-~il~vGr~~~~Kg~--~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~---~~ 340 (562)
.++..+.+ +++..|.-...|.+ +.+.+++..+.++ +.+++++|...+.+..++..+..+.....+.+..+ ..
T Consensus 179 ~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ 256 (349)
T 3tov_A 179 HGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLA 256 (349)
T ss_dssp TTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHH
T ss_pred cCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHH
Confidence 34443344 44556654456654 5778888887765 68888899776777777776666544444545433 33
Q ss_pred HHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-cccc-ccCCceEeeCCHHHHHHHHHHHHhCCCCCc--c-H
Q 008544 341 PIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFF-KQFPNCRTYDGRNGFVEATLKALAEEPAQP--T-D 415 (562)
Q Consensus 341 ~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v-~~~~~g~~~~d~~~la~~i~~ll~~~~~~l--~-~ 415 (562)
++++.||++|..- + |..-+ |.|+|+|+|+--.+. +... .-+.+..++.....-. +. ....... + .
T Consensus 257 ali~~a~~~i~~D---s-G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~vl~~~~~C~-C~----~~~~~~C~~~~~ 326 (349)
T 3tov_A 257 AAMNRCNLLITND---S-GPMHV-GISQGVPIVALYGPSNPFFYGPYQAHAIVLETMDSYE-IG----KSMKKIIKEGNY 326 (349)
T ss_dssp HHHHTCSEEEEES---S-HHHHH-HHTTTCCEEEECSSCCHHHHSCTTCSEEEECHHHHHH-HH----HHTTCCCCGGGC
T ss_pred HHHHhCCEEEECC---C-CHHHH-HHhcCCCEEEEECCCCccccCCCCCCeEEEeCCCCcC-cc----CCccCCCCCCcc
Confidence 8899999999762 2 44444 899999999985544 3322 2233344443222222 21 1111111 1 0
Q ss_pred HHHhcCCHHHHHHHHHHHHHh
Q 008544 416 AQTHQLSWESATERFLQVAEL 436 (562)
Q Consensus 416 ~ar~~~sw~~~~~~~~~~y~~ 436 (562)
...+..+-+.+.+...+..++
T Consensus 327 ~Cm~~I~~~~V~~a~~~lL~~ 347 (349)
T 3tov_A 327 KGLSVISEEQVIKAAETLLLE 347 (349)
T ss_dssp STTTTSCHHHHHHHHHHHHHH
T ss_pred chhhcCCHHHHHHHHHHHHhh
Confidence 122467777777777666543
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=96.08 E-value=0.0073 Score=56.75 Aligned_cols=48 Identities=13% Similarity=0.131 Sum_probs=38.8
Q ss_pred CCeeEEeCCCCChHHHHh-hcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCC
Q 008544 327 KLVVRVYPGRDHADPIFH-DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHP 378 (562)
Q Consensus 327 ~l~~~~~~~~~~~~~l~~-~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~ 378 (562)
+.++.++...+++.++|+ .||++|.= +-..+++|++++|+|.|.-..+
T Consensus 113 ~~~v~v~~f~~~m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 113 KLKVIGFDFSTKMQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp SSEEEECCSSSSHHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCEECCS
T ss_pred CceEEEeeccchHHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEEEcCc
Confidence 345566777789999999 99999954 4578999999999998887554
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=96.07 E-value=0.016 Score=60.84 Aligned_cols=126 Identities=11% Similarity=0.098 Sum_probs=77.0
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEE-EeCCCC---HHHHHHHHHhcCCeeEEeCCCCChHHHHh--hc
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDL-YGNGED---FDQIQRAAKKLKLVVRVYPGRDHADPIFH--DY 346 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i-vG~g~~---~~~l~~~~~~l~l~~~~~~~~~~~~~l~~--~a 346 (562)
..+.+..|..... ..+.+.+++..+.+. +.++++ +|.... .+.+.+ +...++.+.. +.+..+++. .+
T Consensus 272 ~vv~vs~GS~~~~-~~~~~~~~~~~l~~~--~~~~lw~~~~~~~~~l~~~~~~---~~~~~~~v~~-w~pq~~vL~h~~~ 344 (456)
T 2c1x_A 272 SVVYISFGTVTTP-PPAEVVALSEALEAS--RVPFIWSLRDKARVHLPEGFLE---KTRGYGMVVP-WAPQAEVLAHEAV 344 (456)
T ss_dssp CEEEEECCSSCCC-CHHHHHHHHHHHHHH--TCCEEEECCGGGGGGSCTTHHH---HHTTTEEEES-CCCHHHHHTSTTE
T ss_pred ceEEEecCccccC-CHHHHHHHHHHHHhc--CCeEEEEECCcchhhCCHHHHh---hcCCceEEec-CCCHHHHhcCCcC
Confidence 3444556665533 344444444444433 355554 443211 122222 1223455554 445567888 66
Q ss_pred CEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccC-CceEeeC----CHHHHHHHHHHHHhCC
Q 008544 347 KVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQF-PNCRTYD----GRNGFVEATLKALAEE 409 (562)
Q Consensus 347 dv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~-~~g~~~~----d~~~la~~i~~ll~~~ 409 (562)
|+||.- +-..+++||+++|+|+|+-...+ ...+.+. ..|...+ +.+++.++|.++++++
T Consensus 345 ~~fvth----~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~ 413 (456)
T 2c1x_A 345 GAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQE 413 (456)
T ss_dssp EEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSH
T ss_pred CEEEec----CCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCC
Confidence 788843 45789999999999999987654 4555555 6676653 7899999999999875
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=95.93 E-value=0.041 Score=57.55 Aligned_cols=131 Identities=11% Similarity=0.028 Sum_probs=78.5
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHH-HHHHhcCCeeEEeCCCCChHHHHhhcCEEEE
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQ-RAAKKLKLVVRVYPGRDHADPIFHDYKVFLN 351 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~-~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~ 351 (562)
..+.+..|.+.. ...+.+.+.+..+.+. +.+++++-.+...+.+. ...++...++.+. ++.+..+++..+++-++
T Consensus 274 ~vVyvsfGS~~~-~~~~~~~el~~~l~~~--~~~flw~~~~~~~~~lp~~~~~~~~~~~~vv-~w~Pq~~vL~h~~v~~f 349 (454)
T 3hbf_A 274 SVVYISFGSVVT-PPPHELTALAESLEEC--GFPFIWSFRGDPKEKLPKGFLERTKTKGKIV-AWAPQVEILKHSSVGVF 349 (454)
T ss_dssp CEEEEECCSSCC-CCHHHHHHHHHHHHHH--CCCEEEECCSCHHHHSCTTHHHHTTTTEEEE-SSCCHHHHHHSTTEEEE
T ss_pred ceEEEecCCCCc-CCHHHHHHHHHHHHhC--CCeEEEEeCCcchhcCCHhHHhhcCCceEEE-eeCCHHHHHhhcCcCeE
Confidence 334455666553 2344455555555443 45666654333222211 1112223345555 45556799999994444
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccC-CceEeeC----CHHHHHHHHHHHHhCC
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQF-PNCRTYD----GRNGFVEATLKALAEE 409 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~-~~g~~~~----d~~~la~~i~~ll~~~ 409 (562)
-+. +--.+++||+++|+|+|+-...+ ...+.+. ..|..++ +.+++.++|.++++++
T Consensus 350 vtH--~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~ 415 (454)
T 3hbf_A 350 LTH--SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSE 415 (454)
T ss_dssp EEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSH
T ss_pred Eec--CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCC
Confidence 333 34678999999999999986643 3445553 6666652 7899999999999763
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=95.21 E-value=0.17 Score=53.35 Aligned_cols=126 Identities=12% Similarity=0.053 Sum_probs=77.2
Q ss_pred cEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCC--------CHHHHHHHHHhcCCeeEEeCCCCChHHHHhh
Q 008544 274 KGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGE--------DFDQIQRAAKKLKLVVRVYPGRDHADPIFHD 345 (562)
Q Consensus 274 ~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~--------~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~ 345 (562)
.+.+..|.+. ....+.+.+++..+.+. +.+++++-..+ ..+.+.+. ...++.+.. +.+..++++.
T Consensus 297 vv~vs~GS~~-~~~~~~~~~~~~~l~~~--~~~~l~~~~~~~~~~~~~~l~~~~~~~---~~~~~~v~~-~~pq~~~L~h 369 (482)
T 2pq6_A 297 VVYVNFGSTT-VMTPEQLLEFAWGLANC--KKSFLWIIRPDLVIGGSVIFSSEFTNE---IADRGLIAS-WCPQDKVLNH 369 (482)
T ss_dssp EEEEECCSSS-CCCHHHHHHHHHHHHHT--TCEEEEECCGGGSTTTGGGSCHHHHHH---HTTTEEEES-CCCHHHHHTS
T ss_pred eEEEecCCcc-cCCHHHHHHHHHHHHhc--CCcEEEEEcCCccccccccCcHhHHHh---cCCCEEEEe-ecCHHHHhcC
Confidence 3444556654 23444455555555432 46776653211 12333322 233456655 4455578977
Q ss_pred cCE--EEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccc-cCCceEeeC---CHHHHHHHHHHHHhCCC
Q 008544 346 YKV--FLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFK-QFPNCRTYD---GRNGFVEATLKALAEEP 410 (562)
Q Consensus 346 adv--~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~-~~~~g~~~~---d~~~la~~i~~ll~~~~ 410 (562)
.++ ||.- +-..+++||+++|+|+|+-...+ ...+. +-..|...+ +.+++.++|.++++|+.
T Consensus 370 ~~~~~~vth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~~~ 441 (482)
T 2pq6_A 370 PSIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAGDK 441 (482)
T ss_dssp TTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTSHH
T ss_pred CCCCEEEec----CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHcCCc
Confidence 665 6532 45789999999999999997754 33343 456676664 89999999999998763
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=95.16 E-value=0.23 Score=52.02 Aligned_cols=127 Identities=8% Similarity=-0.055 Sum_probs=75.5
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCC---CHHHHHHHHHhcCCeeEEeCCCCChHHHHh--hcC
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGE---DFDQIQRAAKKLKLVVRVYPGRDHADPIFH--DYK 347 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~---~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~--~ad 347 (562)
..+.+..|.+...-+.+.+.+++..+.+. +.+++++-... ..+.+.+.... ..++.+.. +.+..+++. .+|
T Consensus 277 ~vv~vs~GS~~~~~~~~~~~~~~~~l~~~--~~~~l~~~~~~~~~l~~~~~~~~~~-~~~~~v~~-w~pq~~vL~h~~~~ 352 (463)
T 2acv_A 277 SVVFLCFGSMGVSFGPSQIREIALGLKHS--GVRFLWSNSAEKKVFPEGFLEWMEL-EGKGMICG-WAPQVEVLAHKAIG 352 (463)
T ss_dssp CEEEEECCSSCCCCCHHHHHHHHHHHHHH--TCEEEEECCCCGGGSCTTHHHHHHH-HCSEEEES-SCCHHHHHHSTTEE
T ss_pred ceEEEEeccccccCCHHHHHHHHHHHHhC--CCcEEEEECCCcccCChhHHHhhcc-CCCEEEEc-cCCHHHHhCCCccC
Confidence 34455666665233444444445444433 46666654322 11233322210 12345555 445557786 577
Q ss_pred EEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccc-cccCCceEee------C----CHHHHHHHHHHHHh
Q 008544 348 VFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDF-FKQFPNCRTY------D----GRNGFVEATLKALA 407 (562)
Q Consensus 348 v~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~-v~~~~~g~~~------~----d~~~la~~i~~ll~ 407 (562)
+||.- +-..+++||+++|+|+|+-...+ ... +.+-..|..+ + +.+++.++|.++++
T Consensus 353 ~fvth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~ 424 (463)
T 2acv_A 353 GFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMD 424 (463)
T ss_dssp EEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTC
T ss_pred eEEec----CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHh
Confidence 78743 45789999999999999987653 344 4565666655 1 67899999999995
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=91.21 E-value=1 Score=44.38 Aligned_cols=128 Identities=12% Similarity=0.120 Sum_probs=72.5
Q ss_pred ccEEEEEeeccccCCH--HHHHHHHHHHHHhcCCcEEEEEeCCCC-HHHHHHHHHhcCCeeEEeCC--CCChHHHHhhcC
Q 008544 273 TKGAYYIGRMVWSKGY--EELLGLLNIYHKELAGLEMDLYGNGED-FDQIQRAAKKLKLVVRVYPG--RDHADPIFHDYK 347 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~--~~ll~a~~~l~~~~~~~~l~ivG~g~~-~~~l~~~~~~l~l~~~~~~~--~~~~~~l~~~ad 347 (562)
..+++..|.-.+.|.+ +.+.+++..+.++ ++++++.+.++. .+..++..+..+ .+.+.+. ..+..++++.||
T Consensus 179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~~g~~~e~~~~~~i~~~~~-~~~l~g~~sl~el~ali~~a~ 255 (326)
T 2gt1_A 179 EYAVFLHATTRDDKHWPEEHWRELIGLLADS--GIRIKLPWGAPHEEERAKRLAEGFA-YVEVLPKMSLEGVARVLAGAK 255 (326)
T ss_dssp SEEEEECCCSSGGGSCCHHHHHHHHHHTTTT--CCEEEECCSSHHHHHHHHHHHTTCT-TEEECCCCCHHHHHHHHHTCS
T ss_pred CEEEEEeCCCCccccCCHHHHHHHHHHHHHC--CCcEEEecCCHHHHHHHHHHHhhCC-cccccCCCCHHHHHHHHHhCC
Confidence 3455666654555654 4777777777543 788888743443 334444444333 2444332 223348899999
Q ss_pred EEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccc-cCCceEe--------eC-CHHHHHHHHHHHHhC
Q 008544 348 VFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFK-QFPNCRT--------YD-GRNGFVEATLKALAE 408 (562)
Q Consensus 348 v~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~-~~~~g~~--------~~-d~~~la~~i~~ll~~ 408 (562)
++|..- + |..-+ |.|+|+|+|+--.+. +.... -+....+ -+ ++++..+++.+++++
T Consensus 256 l~I~~D---S-G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 256 FVVSVD---T-GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EEEEES---S-HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred EEEecC---C-cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence 999762 2 44555 777999999873332 11110 1111111 12 778888888877754
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=83.82 E-value=5.7 Score=43.86 Aligned_cols=171 Identities=8% Similarity=-0.073 Sum_probs=95.9
Q ss_pred ccEEEEcChhhhccCC-----C-ccccccccCC--CCcC-cc---hhhhHHhhcCCCCCccEEEEEeeccccC----C--
Q 008544 226 CHKVIRLSAATQEYPN-----S-IVCNVHGVNP--KFLE-IG---EKKMEQQQNGNKAFTKGAYYIGRMVWSK----G-- 287 (562)
Q Consensus 226 ad~vi~~S~~~~~~~~-----~-~~~~v~GVd~--~~~~-~~---~~~~~~~~~~~~~~~~~il~vGr~~~~K----g-- 287 (562)
.|.+++.|+...+... . ......|..- .++. .. .....+...++++++++|+|.-...... |
T Consensus 479 ~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~~~~~~ 558 (729)
T 3l7i_A 479 WDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSKGKY 558 (729)
T ss_dssp CSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCCGGGSS
T ss_pred CCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccchHHHHHHHHHHhCCCCCCeEEEEeeeeeCCcccccccc
Confidence 4999999988766321 1 1111224322 1121 11 1122345677788899999998654321 1
Q ss_pred ---HHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHH--HhcCCeeEEeCCCCChHHHHhhcCEEEEccCCCCCcHHH
Q 008544 288 ---YEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAA--KKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTAT 362 (562)
Q Consensus 288 ---~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~--~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~ 362 (562)
...-++.+.+... +++.+++-.- +. +.... ......+.-.....+..+++..+|++|-= ++-++
T Consensus 559 ~~~~~~~~~~l~~~l~--~~~~li~r~H-p~---~~~~~~~~~~~~~~~~~~~~~di~~ll~~aD~lITD-----ySSv~ 627 (729)
T 3l7i_A 559 LFELKIDLDNLYKELG--DDYVILLRMH-YL---ISNALDLSGYENFAIDVSNYNDVSELFLISDCLITD-----YSSVM 627 (729)
T ss_dssp CCCCTTCHHHHHHHHT--TTEEEEECCC-HH---HHTTCCCTTCTTTEEECTTCSCHHHHHHTCSEEEES-----SCTHH
T ss_pred ccchhhHHHHHHHHcC--CCeEEEEecC-cc---hhccccccccCCcEEeCCCCcCHHHHHHHhCEEEee-----chHHH
Confidence 1111233322222 3666666543 21 11110 01111122356677889999999999943 56789
Q ss_pred HHHHHcCCcEEeeCCCCccc----------cccCCceEeeCCHHHHHHHHHHHHh
Q 008544 363 AEALAMGKIVVCANHPSNDF----------FKQFPNCRTYDGRNGFVEATLKALA 407 (562)
Q Consensus 363 lEAma~G~PVI~t~~~~~e~----------v~~~~~g~~~~d~~~la~~i~~ll~ 407 (562)
.|++..++|||-....-.++ +.+...|-++.|.+++.++|.....
T Consensus 628 fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~~~~~~eL~~~i~~~~~ 682 (729)
T 3l7i_A 628 FDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPIYTEPYGLAKELKNLDK 682 (729)
T ss_dssp HHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCEESSHHHHHHHHTTHHH
T ss_pred HhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCeECCHHHHHHHHhhhhc
Confidence 99999999999883322111 1222345667899999999987754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 562 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 1e-04 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 0.001 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 42.0 bits (97), Expect = 1e-04
Identities = 39/297 (13%), Positives = 75/297 (25%), Gaps = 26/297 (8%)
Query: 163 DIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLA 222
+ L P H + + G+ L V + + +
Sbjct: 175 IFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVI 234
Query: 223 RVHCHKV------IRLSAATQEYPNSIVCNVHGVNPKFLEIGEKKMEQQQNGNKAFTKGA 276
H + I + I N N K + +K + + + +
Sbjct: 235 GSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLF 294
Query: 277 YYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGR 336
I R+ W KG + + ++ L + G+ + AA + V V G
Sbjct: 295 CVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGY 354
Query: 337 DHADP--IFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSN-DFFKQFPNCRTYD 393
+ + + PS + AL G I V A D +
Sbjct: 355 NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALAS 414
Query: 394 -GRNGFV---------EATLKALAEEPAQPTDAQ-------THQLSWESATERFLQV 433
G + ++ P +SWE + + +
Sbjct: 415 KAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSAGLYAAL 471
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 38.6 bits (88), Expect = 0.001
Identities = 60/426 (14%), Positives = 110/426 (25%), Gaps = 46/426 (10%)
Query: 51 HIAIFTTASLPWLTG---TAVNPLFRAAYLAKDGERRVTLVIPW-----LSLIHQKQVYP 102
+ + LP G A+ + + LA G V + P I + +V+
Sbjct: 2 KVLLLGFEFLPVKVGGLAEALTAI--SEALASLGHE-VLVFTPSHGRFQGEEIGKIRVFG 58
Query: 103 GNITFASPKEQEAYVRWWLEDRTGFTST-FDTRFYPGKFAADKKSILAVGDITEIIPDEE 161
+ E+ +R + S + G A + + EE
Sbjct: 59 EEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREE 118
Query: 162 ADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEY-------------------VK 202
V+ + T F K V +H +
Sbjct: 119 PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDID 178
Query: 203 REKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEYPNSIVCNVHGVNPKFLEIGE-KK 261
E A ++ V+ N I C+ + E KK
Sbjct: 179 PEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKK 238
Query: 262 MEQQQNGNKAFTKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQ--- 318
+ G + KG + LL + I + EM G+ +
Sbjct: 239 SLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEG 298
Query: 319 ---IQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCA 375
V+ R+ ++ + PS + EA+ +G I + +
Sbjct: 299 WARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIAS 358
Query: 376 NHPSNDFFKQFPNCRTYDGRN--GFVEATLKALAEEPAQPTD------AQTHQLSWESAT 427
+ A LKAL + + + SWE +
Sbjct: 359 AVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSA 418
Query: 428 ERFLQV 433
ER+++
Sbjct: 419 ERYVKA 424
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 562 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.98 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.87 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.83 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.77 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.01 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.94 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.65 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.63 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.36 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.19 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.86 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.69 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.64 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.6 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 96.62 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 96.58 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 94.23 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 93.46 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 86.81 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=2.7e-35 Score=313.80 Aligned_cols=377 Identities=14% Similarity=0.114 Sum_probs=234.4
Q ss_pred CeEEEEecccCCC--cccccccHHHHHHHHHHcCCCeEEEEeecCCccccc-----cc--cC--------------CCce
Q 008544 50 QHIAIFTTASLPW--LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQK-----QV--YP--------------GNIT 106 (562)
Q Consensus 50 ~rI~ivt~~~~P~--~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~-----~~--~p--------------~~i~ 106 (562)
|||++||..++|. .||.+..+..|+++|+++| |+|+|++|.+...+.. .+ +. .++.
T Consensus 1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~G-h~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 79 (477)
T d1rzua_ 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHG-VRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLD 79 (477)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT-CEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEE
T ss_pred CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcC-CeEEEEecCCcchhhhcccceEEEEEeccCCceEEEEEEEECCee
Confidence 7999999888886 4776777888999999998 9999999854221000 00 00 0000
Q ss_pred eCCchhhHHHHHHHhhhcc-CCCCCcccccccccchhccchhhh-HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHh
Q 008544 107 FASPKEQEAYVRWWLEDRT-GFTSTFDTRFYPGKFAADKKSILA-VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKA 184 (562)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~y~~r~~~~~~~~~~-~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~ 184 (562)
..-... ..+ + .+. ..........|+..+......... ...+...+...+|||||+|+.... +.........
T Consensus 80 ~~~l~~-~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~-l~~~~~~~~~ 152 (477)
T d1rzua_ 80 LLILDA-PAY---Y--ERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAA-MTPVYMRYAE 152 (477)
T ss_dssp EEEEEC-HHH---H--CSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHT-THHHHHHHSS
T ss_pred EEEecC-hhh---c--ccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHH-HHHHHHHHhh
Confidence 000000 000 0 000 000000111111111111111111 122344456679999999975433 1211111222
Q ss_pred hcC-CEEEEEcCCcHHH------Hhhhh-chHHHH-------HHHHHHHHHHHHHhccEEEEcChhhhccC---------
Q 008544 185 KFR-FVVGIVHTNYLEY------VKREK-NDRLQA-------FLLEFVNSWLARVHCHKVIRLSAATQEYP--------- 240 (562)
Q Consensus 185 ~~~-~vi~~~h~~~~~~------~~~~~-~~~~~~-------~~~~~~~~~~~~~~ad~vi~~S~~~~~~~--------- 240 (562)
... |+|.++|+..... ..... ...... ..... .+.... .+|.++++|...++..
T Consensus 153 ~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~ad~~~~vs~~~~~~~~~~~~~~~~ 230 (477)
T d1rzua_ 153 TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSF-LKGGLQ-TATALSTVSPSYAEEILTAEFGMGL 230 (477)
T ss_dssp SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEH-HHHHHH-HCSEEEESCHHHHHHTTSHHHHTTC
T ss_pred CCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHH-HHHHHH-hhhhhhhccHHHHHHHHHHhcCcch
Confidence 222 8999999642110 00000 000000 00000 111112 3799999997655411
Q ss_pred --------CCccccccccCCCCcCcchhh-------------------hHHhhcCC-CCCccEEEEEeeccccCCHHHHH
Q 008544 241 --------NSIVCNVHGVNPKFLEIGEKK-------------------MEQQQNGN-KAFTKGAYYIGRMVWSKGYEELL 292 (562)
Q Consensus 241 --------~~~~~~v~GVd~~~~~~~~~~-------------------~~~~~~~~-~~~~~~il~vGr~~~~Kg~~~ll 292 (562)
.+.....||+|.+.|.|.... ......+. +++.++|+|+||+.++||++.|+
T Consensus 231 ~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll 310 (477)
T d1rzua_ 231 EGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMA 310 (477)
T ss_dssp HHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHH
T ss_pred hhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHH
Confidence 112233468888766553221 11222333 34467899999999999999999
Q ss_pred HHHHHHHHhcCCcEEEEEeCCCCH--HHHHHHHHhcCCeeEEeCCCCChH--HHHhhcCEEEEccCCCCCcHHHHHHHHc
Q 008544 293 GLLNIYHKELAGLEMDLYGNGEDF--DQIQRAAKKLKLVVRVYPGRDHAD--PIFHDYKVFLNPSTTDVVCTATAEALAM 368 (562)
Q Consensus 293 ~a~~~l~~~~~~~~l~ivG~g~~~--~~l~~~~~~l~l~~~~~~~~~~~~--~l~~~adv~v~pS~~E~~~~~~lEAma~ 368 (562)
+|+.++.+. +.+++++|.|+.. ..+++....++.++.++++.++.. .+|+.||+||+||.+|+||++++|||||
T Consensus 311 ~a~~~~~~~--~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~ 388 (477)
T d1rzua_ 311 EAVDEIVSL--GGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY 388 (477)
T ss_dssp TTHHHHHHT--TCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH
T ss_pred HHHHHHHhh--CCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHc
Confidence 999998765 7899999998763 455566677777788776665543 6899999999999999999999999999
Q ss_pred CCcEEeeCCCC-ccccccCC---------ceEeeC--CHHHHHHHHHHHHh---CCCC--CccHHHH-hcCCHHHHHHHH
Q 008544 369 GKIVVCANHPS-NDFFKQFP---------NCRTYD--GRNGFVEATLKALA---EEPA--QPTDAQT-HQLSWESATERF 430 (562)
Q Consensus 369 G~PVI~t~~~~-~e~v~~~~---------~g~~~~--d~~~la~~i~~ll~---~~~~--~l~~~ar-~~~sw~~~~~~~ 430 (562)
|+|||+|+.|| .|++.++. +|++++ |+++|+++|.++++ |++. +|++++. ++|||+++++++
T Consensus 389 G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~~~~fsw~~~a~~~ 468 (477)
T d1rzua_ 389 GCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSAGLY 468 (477)
T ss_dssp TCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTCCCBHHHHHHHH
T ss_pred CCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 99999999998 99998764 888874 99999999998876 4443 6777776 779999999999
Q ss_pred HHHHHhcC
Q 008544 431 LQVAELVG 438 (562)
Q Consensus 431 ~~~y~~~~ 438 (562)
+++|+...
T Consensus 469 ~~lY~~ll 476 (477)
T d1rzua_ 469 AALYSQLI 476 (477)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99999764
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=1.2e-32 Score=288.25 Aligned_cols=380 Identities=15% Similarity=0.154 Sum_probs=232.3
Q ss_pred CeEEEEecccCCC-cccccccHHHHHHHHHHcCCCeEEEEeecCCccccccc-----cCCCceeCCchhhHHHHHHHhhh
Q 008544 50 QHIAIFTTASLPW-LTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQV-----YPGNITFASPKEQEAYVRWWLED 123 (562)
Q Consensus 50 ~rI~ivt~~~~P~-~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~-----~p~~i~~~~~~~~~~~~~~~~~~ 123 (562)
|||+++|..|+|. .||.+..+..|+++|+++| |+|+|++|.+........ +...+...........+..+. .
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~G-h~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 78 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLG-HEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYR-I 78 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTT-CEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEE-E
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcC-CEEEEEecCCCccchhhccceeecccccceeeeeeccCCeEEEe-c
Confidence 7999999999997 5888899999999999998 999999985432111100 000000000000000000000 0
Q ss_pred ccCCCCCcccccccccchhccchh-----hhHHhHHhhcCc-CCCcEEEecCCchhhhhhchHHHHhhcC-CEEEEEcCC
Q 008544 124 RTGFTSTFDTRFYPGKFAADKKSI-----LAVGDITEIIPD-EEADIAVLEEPEHLTWFHHGKRWKAKFR-FVVGIVHTN 196 (562)
Q Consensus 124 ~~~~~~~~~i~~y~~r~~~~~~~~-----~~~~~l~~~i~~-~~pDvV~~~~~~~~~~~~~~~~~~~~~~-~vi~~~h~~ 196 (562)
...+.. ....+........+.. .....+..+++. ..|||||+|++... +. +..+++..+ |++.++|+.
T Consensus 79 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~-~~--~~~~~~~~~~~~v~~~h~~ 153 (437)
T d2bisa1 79 GGGLLD--SEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTV-FA--GALIKKYFKIPAVFTIHRL 153 (437)
T ss_dssp ESSGGG--CSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGH-HH--HHHHHHHHCCCEEEEESSC
T ss_pred Cccccc--cccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhh-hH--hhhhhccccCceeEEEeec
Confidence 000000 0000000000000000 011223444443 46899999987543 33 333444545 899999976
Q ss_pred cHHH-----HhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhc-------cCCCcc-ccccccCCCCcCcchhh--
Q 008544 197 YLEY-----VKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQE-------YPNSIV-CNVHGVNPKFLEIGEKK-- 261 (562)
Q Consensus 197 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~-------~~~~~~-~~v~GVd~~~~~~~~~~-- 261 (562)
.... ......................+ .+|.+++.+..... .+...+ +..+|+|++.+.+....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~~ 232 (437)
T d2bisa1 154 NKSKLPAFYFHEAGLSELAPYPDIDPEHTGGY-IADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGS 232 (437)
T ss_dssp CCCCEEHHHHHHTTCGGGCCSSEECHHHHHHH-HSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCCSC
T ss_pred cccccchhhhhhccchhhhhHHHHHHHHHHHH-hhhhhcccchhhhhhhhhhhccccCceEEEecccccccccccccchh
Confidence 3211 10000000000000001111222 37999999866543 122333 33469999877543211
Q ss_pred ------hHHhhcCCCCCccEEEEEeeccc-cCCHHHHHHHHHHHHH--hcCCcEEEEEeCCCCH--HHHHHHHHhcCCee
Q 008544 262 ------MEQQQNGNKAFTKGAYYIGRMVW-SKGYEELLGLLNIYHK--ELAGLEMDLYGNGEDF--DQIQRAAKKLKLVV 330 (562)
Q Consensus 262 ------~~~~~~~~~~~~~~il~vGr~~~-~Kg~~~ll~a~~~l~~--~~~~~~l~ivG~g~~~--~~l~~~~~~l~l~~ 330 (562)
......+.. +.+.++|+|++.. .||++.+++|+..+.. +.++++|+++|.|+.. ..++...+..+ ..
T Consensus 233 ~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~~~~~-~~ 310 (437)
T d2bisa1 233 RDERKKSLLSKFGMD-EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NV 310 (437)
T ss_dssp HHHHHHHHHHHTTCC-SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHTCT-TE
T ss_pred hHHHHHhhhhhhhcc-CCceEEEeecccccchhHHHHHhhhcccccccccccceeeeecccccccccchhhhccccc-cc
Confidence 112233433 3688999999964 7999999999998854 4578999999998764 33344444444 34
Q ss_pred EEeCCCC---ChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHH
Q 008544 331 RVYPGRD---HADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLK 404 (562)
Q Consensus 331 ~~~~~~~---~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ 404 (562)
.++++.. +...+++.+|++++||..|++|++++||||||+|||+|+.|+ .|++.+ .+|++++ |+++++++|.+
T Consensus 311 ~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~ 389 (437)
T d2bisa1 311 KVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILK 389 (437)
T ss_dssp EEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTCHHHHHHHHHH
T ss_pred eeccccCcHHHHHHHHhhhccccccccccccchHHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEECCCCHHHHHHHHHH
Confidence 4454433 345899999999999999999999999999999999999998 788775 5788874 99999999999
Q ss_pred HHhCCC-C--CccHHHH---hcCCHHHHHHHHHHHHHhcCcc
Q 008544 405 ALAEEP-A--QPTDAQT---HQLSWESATERFLQVAELVGDV 440 (562)
Q Consensus 405 ll~~~~-~--~l~~~ar---~~~sw~~~~~~~~~~y~~~~~~ 440 (562)
++++++ . .|+++++ ++|||++++++++++|+.....
T Consensus 390 ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r 431 (437)
T d2bisa1 390 ALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 431 (437)
T ss_dssp HHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTCSCC
T ss_pred HHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 997544 3 6777776 6799999999999999988743
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=3.8e-32 Score=276.68 Aligned_cols=338 Identities=14% Similarity=0.121 Sum_probs=227.0
Q ss_pred EEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCCCc
Q 008544 52 IAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTSTF 131 (562)
Q Consensus 52 I~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (562)
|++++..|.|+ ||++..+..++++|+++| |+|+|+|+... .. .|+++.+.. ... .
T Consensus 2 i~f~~~~y~p~-GG~e~~~~~la~~L~~~G-~~V~v~~~~~~--~~---~~~~~~~~~---------------~~~---~ 56 (370)
T d2iw1a1 2 VAFCLYKYFPF-GGLQRDFMRIASTVAARG-HHVRVYTQSWE--GD---CPKAFELIQ---------------VPV---K 56 (370)
T ss_dssp EEEECSEECTT-CHHHHHHHHHHHHHHHTT-CCEEEEESEEC--SC---CCTTCEEEE---------------CCC---C
T ss_pred EEEEecCCCCC-CCHHHHHHHHHHHHHHCC-CEEEEEecCCC--CC---CCCceEEEE---------------cCc---c
Confidence 88999888885 888999999999999998 99999986321 11 122111110 000 0
Q ss_pred ccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcC-CcHHHHhhhh-----
Q 008544 132 DTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHT-NYLEYVKREK----- 205 (562)
Q Consensus 132 ~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~-~~~~~~~~~~----- 205 (562)
.... + .+.......+...++..++|+||.+........ ...+. .+........
T Consensus 57 ~~~~----~---~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~ 115 (370)
T d2iw1a1 57 SHTN----H---GRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDV--------------YFAADVCYAEKVAQEKGFLYR 115 (370)
T ss_dssp CSSH----H---HHHHHHHHHHHHHHHHSCCSEEEESSCCTTCSE--------------EECCSCCHHHHHHHHCCHHHH
T ss_pred cccc----c---hhhHHHHHHHHHHHHhcccceeeecccCchHHH--------------HHHhhcccceeeeeecCcccc
Confidence 0000 0 000001223556667788999998765332000 00000 0000000000
Q ss_pred chHHHHHHHHHHHHHHHHHhccEEEEcChhhhc-c------CCCccc-cccccCCCCcCc----chhhhHHhhcCCCCCc
Q 008544 206 NDRLQAFLLEFVNSWLARVHCHKVIRLSAATQE-Y------PNSIVC-NVHGVNPKFLEI----GEKKMEQQQNGNKAFT 273 (562)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~-~------~~~~~~-~v~GVd~~~~~~----~~~~~~~~~~~~~~~~ 273 (562)
...............+....++.+++.++...+ + ..+.+. ..+|++++.+.+ ......+...+++++.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~ 195 (370)
T d2iw1a1 116 LTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQ 195 (370)
T ss_dssp TSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTC
T ss_pred ccchhchhHHHHHHHHhhccCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhccCCCccc
Confidence 000000011111111222246788888866554 1 222332 336888754322 2233345567788889
Q ss_pred cEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCe--eEEeCCCCChHHHHhhcCEEEE
Q 008544 274 KGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLV--VRVYPGRDHADPIFHDYKVFLN 351 (562)
Q Consensus 274 ~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~--~~~~~~~~~~~~l~~~adv~v~ 351 (562)
++++|+|++.++||++.+++|+.++.++.++..+.++|.++..+.+++.+++++.. +++++..+++.++|+.+|++|+
T Consensus 196 ~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~v~ 275 (370)
T d2iw1a1 196 NLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLH 275 (370)
T ss_dssp EEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEE
T ss_pred eEEEEEeccccccchhhhcccccccccccccceeeecccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999998888888898888877778888888888765 5567888899999999999999
Q ss_pred ccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEee---CCHHHHHHHHHHHHhCCCC--CccHHHH---hcCC
Q 008544 352 PSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTY---DGRNGFVEATLKALAEEPA--QPTDAQT---HQLS 422 (562)
Q Consensus 352 pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~---~d~~~la~~i~~ll~~~~~--~l~~~ar---~~~s 422 (562)
||..|+||++++|||+||+|||+|+.++ .|++.++.+|+++ .|+++++++|.++++|++. +|+++++ +.|+
T Consensus 276 ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~~~~~~~~~~ar~~~~~~~ 355 (370)
T d2iw1a1 276 PAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQD 355 (370)
T ss_dssp CCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSC
T ss_pred ccccccccceeeecccCCeeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999998 9999999999764 3999999999999999886 8888887 5566
Q ss_pred HHHHHHHHHHHHH
Q 008544 423 WESATERFLQVAE 435 (562)
Q Consensus 423 w~~~~~~~~~~y~ 435 (562)
|.+..+++.++|+
T Consensus 356 ~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 356 LYSLPEKAADIIT 368 (370)
T ss_dssp CSCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHh
Confidence 5555666666654
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.87 E-value=4.8e-22 Score=184.91 Aligned_cols=167 Identities=19% Similarity=0.211 Sum_probs=127.0
Q ss_pred ccCCCCcCcch--------hhhHHhhcCCCCCccEEEEEeecc-ccCCHHHHHHHHHHHHH--hcCCcEEEEEeCCCCH-
Q 008544 249 GVNPKFLEIGE--------KKMEQQQNGNKAFTKGAYYIGRMV-WSKGYEELLGLLNIYHK--ELAGLEMDLYGNGEDF- 316 (562)
Q Consensus 249 GVd~~~~~~~~--------~~~~~~~~~~~~~~~~il~vGr~~-~~Kg~~~ll~a~~~l~~--~~~~~~l~ivG~g~~~- 316 (562)
|||.+.|.+.. ......+.+++ +.+.++|+||+. ++||++.++++++.+.. ..++++|+++|.|+..
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~ 79 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMD-EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPEL 79 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCC-SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHH
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCC-CCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCCeEEEEEeecccch
Confidence 78888876532 11223456664 477899999997 58999999999999854 4578999999998653
Q ss_pred -HHHHHHHHhcCCeeEEeCCCC---ChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEe
Q 008544 317 -DQIQRAAKKLKLVVRVYPGRD---HADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRT 391 (562)
Q Consensus 317 -~~l~~~~~~l~l~~~~~~~~~---~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~ 391 (562)
..++...+.++. ..++.+.. ++..+|+.+|++|+||..|++|++++|||+||+|||+++.++ .|++.+ .+|++
T Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~~~e~i~~-~~g~~ 157 (196)
T d2bfwa1 80 EGWARSLEEKHGN-VKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGIL 157 (196)
T ss_dssp HHHHHHHHHHCTT-EEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHCCT-TTCEE
T ss_pred hhhhhhhhhccce-eEEeeeccccccchhccccccccccccccccccccchhhhhcCceeeecCCCccceeecC-Cceee
Confidence 334444444443 44444433 344899999999999999999999999999999999999987 777755 68888
Q ss_pred eC--CHHHHHHHHHHHHhCCCC---CccHHHH
Q 008544 392 YD--GRNGFVEATLKALAEEPA---QPTDAQT 418 (562)
Q Consensus 392 ~~--d~~~la~~i~~ll~~~~~---~l~~~ar 418 (562)
++ |+++++++|.++++.+.. .|+++++
T Consensus 158 ~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~ 189 (196)
T d2bfwa1 158 VKAGDPGELANAILKALELSRSDLSKFRENCK 189 (196)
T ss_dssp ECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 74 999999999999985432 5665555
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.83 E-value=3.2e-20 Score=167.65 Aligned_cols=135 Identities=15% Similarity=0.087 Sum_probs=112.7
Q ss_pred ccEEEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCC---HHHHHHHHHhc-CCeeEEeCCCCC--hHHHHhhc
Q 008544 273 TKGAYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGED---FDQIQRAAKKL-KLVVRVYPGRDH--ADPIFHDY 346 (562)
Q Consensus 273 ~~~il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~---~~~l~~~~~~l-~l~~~~~~~~~~--~~~l~~~a 346 (562)
...++|+||+.++||++.+++|++++ ++.+++++|.+.+ .+.+.+.+.+. .-++++++..++ ..++|+.|
T Consensus 12 ~~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 87 (166)
T d2f9fa1 12 GDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRC 87 (166)
T ss_dssp CSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHC
T ss_pred CCEEEEEecCccccCHHHHHHHHHHh----cCCeEEEEEecccccchhhhhhhhcccccCcEEEeecccccccccccccc
Confidence 45678999999999999999999654 6789999998654 34444444433 335677766543 45899999
Q ss_pred CEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-ccccccCCceEeeC-CHHHHHHHHHHHHhCCCC
Q 008544 347 KVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-NDFFKQFPNCRTYD-GRNGFVEATLKALAEEPA 411 (562)
Q Consensus 347 dv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~~~~g~~~~-d~~~la~~i~~ll~~~~~ 411 (562)
|++|+||..|++|++++|||+||+|||+++.++ .|++.++.+|++++ |+++++++|.+++++++.
T Consensus 88 d~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~d~~~~~~~i~~l~~~~~~ 154 (166)
T d2f9fa1 88 KGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNADVNEIIDAMKKVSKNPDK 154 (166)
T ss_dssp SEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECSCHHHHHHHHHHHHHCTTT
T ss_pred cccccccccccccccccccccccccceeecCCcceeeecCCcccccCCCCHHHHHHHHHHHHhCHHH
Confidence 999999999999999999999999999999997 99999999999875 999999999999998764
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.77 E-value=2.9e-18 Score=179.41 Aligned_cols=264 Identities=12% Similarity=0.035 Sum_probs=170.3
Q ss_pred CcEEEecCCchhhhhhchHHHHhhcC--CEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEEEEcChhhhcc
Q 008544 162 ADIAVLEEPEHLTWFHHGKRWKAKFR--FVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKVIRLSAATQEY 239 (562)
Q Consensus 162 pDvV~~~~~~~~~~~~~~~~~~~~~~--~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~ 239 (562)
-|+|++|....+ .+ +..+.++.. ++...+|..++......... ..+.+...+. .+|.|...+....+.
T Consensus 123 ~d~iwvhDyhl~-ll--p~~lR~~~~~~~i~~flH~pfP~~~~fr~lp-----~~~~il~~ll--~~d~igf~~~~~~~~ 192 (456)
T d1uqta_ 123 DDIIWIHDYHLL-PF--AHELRKRGVNNRIGFFLHIPFPTPEIFNALP-----TYDTLLEQLC--DYDLLGFQTENDRLA 192 (456)
T ss_dssp TCEEEEESGGGT-TH--HHHHHHTTCCSCEEEECCSCCCCHHHHTTST-----THHHHHHHHT--TSSEEEESSHHHHHH
T ss_pred CCeEEEeccchh-hh--HHHHHHhCCCCcEEEEeCCCCCChHHhccCc-----chHHHHHHhh--ccccccccCHHHHHH
Confidence 489999986544 33 333444433 78888898876543221111 1112222222 257777776444331
Q ss_pred C---------------------CCc--c-ccccccCCCCcCcchhh----hHHhhcCCCCCccEEEEEeeccccCCHHHH
Q 008544 240 P---------------------NSI--V-CNVHGVNPKFLEIGEKK----MEQQQNGNKAFTKGAYYIGRMVWSKGYEEL 291 (562)
Q Consensus 240 ~---------------------~~~--~-~~v~GVd~~~~~~~~~~----~~~~~~~~~~~~~~il~vGr~~~~Kg~~~l 291 (562)
. ... + ....|||+..|...... ..........+.++|+++||+++.||++.+
T Consensus 193 fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~ 272 (456)
T d1uqta_ 193 FLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPER 272 (456)
T ss_dssp HHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHH
T ss_pred HHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHHHHHHHhcCCCeEEEEeCCCchhhchHHH
Confidence 0 000 1 11237777554321111 001111112357899999999999999999
Q ss_pred HHHHHHHHHhcCC----cEEEEEeCCCCH---------HHHHHHHHhc-------CCe--eEEeCCC--CChHHHHhhcC
Q 008544 292 LGLLNIYHKELAG----LEMDLYGNGEDF---------DQIQRAAKKL-------KLV--VRVYPGR--DHADPIFHDYK 347 (562)
Q Consensus 292 l~a~~~l~~~~~~----~~l~ivG~g~~~---------~~l~~~~~~l-------~l~--~~~~~~~--~~~~~l~~~ad 347 (562)
++|++++.+++|+ +.++.+|.+... .++.+++.++ +.. +.+.+.. .+...+|+.||
T Consensus 273 l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Ad 352 (456)
T d1uqta_ 273 FLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSD 352 (456)
T ss_dssp HHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCS
T ss_pred HHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhc
Confidence 9999999988876 567777765431 2233333322 222 2233333 33448999999
Q ss_pred EEEEccCCCCCcHHHHHHHHcCCc-----EEeeCCCC-ccccccCCceEeeC--CHHHHHHHHHHHHhCCCC---CccHH
Q 008544 348 VFLNPSTTDVVCTATAEALAMGKI-----VVCANHPS-NDFFKQFPNCRTYD--GRNGFVEATLKALAEEPA---QPTDA 416 (562)
Q Consensus 348 v~v~pS~~E~~~~~~lEAma~G~P-----VI~t~~~~-~e~v~~~~~g~~~~--d~~~la~~i~~ll~~~~~---~l~~~ 416 (562)
+++.||..||||++++||||||+| ||+|+.+| .+.+. +|++++ |++++|++|.+++++++. .+.++
T Consensus 353 v~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~---~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~ 429 (456)
T d1uqta_ 353 VGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVAAALDRALTMSLAERISRHAE 429 (456)
T ss_dssp EEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred eeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHhC---CeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 999999999999999999999999 99999987 77774 367775 999999999999998764 44455
Q ss_pred HH---hcCCHHHHHHHHHHHHHhcC
Q 008544 417 QT---HQLSWESATERFLQVAELVG 438 (562)
Q Consensus 417 ar---~~~sw~~~~~~~~~~y~~~~ 438 (562)
++ .++++..-++.+++..+...
T Consensus 430 ~~~~v~~~~~~~W~~~fl~~l~~~~ 454 (456)
T d1uqta_ 430 MLDVIVKNDINHWQECFISDLKQIV 454 (456)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHCCHHHHHHHHHHHHHhhc
Confidence 44 77999999999998887654
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.01 E-value=2.1e-09 Score=106.52 Aligned_cols=156 Identities=8% Similarity=-0.073 Sum_probs=91.9
Q ss_pred CCccEEEEEeeccccCC-HHHHHHHHHHHHHhcCCcEEEEEeCCCC-HHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCE
Q 008544 271 AFTKGAYYIGRMVWSKG-YEELLGLLNIYHKELAGLEMDLYGNGED-FDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKV 348 (562)
Q Consensus 271 ~~~~~il~vGr~~~~Kg-~~~ll~a~~~l~~~~~~~~l~ivG~g~~-~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv 348 (562)
.+...++.+|.-..... .+.+.+.+..+.. ....+..+.... .............++.+++..++..++|+.||+
T Consensus 175 ~~~~~i~~~~gs~g~~~~~~~~~~~~~~l~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~lm~~adl 251 (351)
T d1f0ka_ 175 EGPVRVLVVGGSQGARILNQTMPQVAAKLGD---SVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV 251 (351)
T ss_dssp CSSEEEEEECTTTCCHHHHHHHHHHHHHHGG---GEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE
T ss_pred cCCcccccccccchhhhhHHHHHHhhhhhcc---cceeeeeccccchhhhhhhhcccccccceeeeehhhHHHHHHhCch
Confidence 33445555543222222 2333344444322 233444444333 333344444555567778888899999999999
Q ss_pred EEEccCCCCCcHHHHHHHHcCCcEEeeCCC---C-----ccccccCCceEeeC----CHHHHHHHHHHHHhCCCCCccHH
Q 008544 349 FLNPSTTDVVCTATAEALAMGKIVVCANHP---S-----NDFFKQFPNCRTYD----GRNGFVEATLKALAEEPAQPTDA 416 (562)
Q Consensus 349 ~v~pS~~E~~~~~~lEAma~G~PVI~t~~~---~-----~e~v~~~~~g~~~~----d~~~la~~i~~ll~~~~~~l~~~ 416 (562)
+|.- +-+.++.||+++|+|+|+...+ + .+.+++...|...+ +.+.+.++|..+..+.-.+|+++
T Consensus 252 ~It~----~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l~~~~~~~~~~~ 327 (351)
T d1f0ka_ 252 VVCR----SGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAER 327 (351)
T ss_dssp EEEC----CCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTCCHHHHHHHHHH
T ss_pred hhcc----ccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEechhhCCHHHHHHHHHhhCHHHHHHHHHH
Confidence 9854 4468999999999999986422 2 45666777777764 56777777776532222277777
Q ss_pred HHh---cCCHHHHHHHHHHH
Q 008544 417 QTH---QLSWESATERFLQV 433 (562)
Q Consensus 417 ar~---~~sw~~~~~~~~~~ 433 (562)
+++ .-.++.+++.++++
T Consensus 328 ~~~~~~~~~a~~i~~~i~~l 347 (351)
T d1f0ka_ 328 ARAASIPDATERVANEVSRV 347 (351)
T ss_dssp HHHTCCTTHHHHHHHHHHHH
T ss_pred HHccCCccHHHHHHHHHHHH
Confidence 762 22355555555544
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.94 E-value=8.1e-08 Score=96.02 Aligned_cols=122 Identities=12% Similarity=-0.029 Sum_probs=75.5
Q ss_pred EEEEeeccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcCCeeEEeCCCCChHHHHhhcCEEEEccCC
Q 008544 276 AYYIGRMVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTT 355 (562)
Q Consensus 276 il~vGr~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~l~~~~~~~~~~~~~l~~~adv~v~pS~~ 355 (562)
+++.......++...+.+.+....... +.++++...+.... ......++.+.+ +.+..+++..+|+||..+
T Consensus 224 v~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~-----~~~~~~~v~i~~-~~p~~~ll~~a~~~v~hg-- 294 (391)
T d1pn3a_ 224 VYVGFGSSSRPATADAAKMAIKAVRAS-GRRIVLSRGWADLV-----LPDDGADCFVVG-EVNLQELFGRVAAAIHHD-- 294 (391)
T ss_dssp EEEECTTCCSTHHHHHHHHHHHHHHHT-TCCEEEECTTTTCC-----CSSCCTTCCEES-SCCHHHHHTTSSCEEEES--
T ss_pred EEEeccccccccHHHHHHHHHHHHHhc-CCEEEEeccccccc-----cccCCCCEEEec-ccCHHHHHhhccEEEecC--
Confidence 333333334455555555554444444 34445444432211 011122344444 446788999999999774
Q ss_pred CCCcHHHHHHHHcCCcEEeeCCCC---------ccccccCCceEeeC----CHHHHHHHHHHHHhC
Q 008544 356 DVVCTATAEALAMGKIVVCANHPS---------NDFFKQFPNCRTYD----GRNGFVEATLKALAE 408 (562)
Q Consensus 356 E~~~~~~lEAma~G~PVI~t~~~~---------~e~v~~~~~g~~~~----d~~~la~~i~~ll~~ 408 (562)
-..++.|||++|+|+|+....+ .+.+.+...|...+ ++++++++|.+++++
T Consensus 295 --G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 358 (391)
T d1pn3a_ 295 --SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTALAP 358 (391)
T ss_dssp --CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSSCCHHHHHHHHHHHTST
T ss_pred --chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence 3578999999999999986542 34555666777652 689999999999964
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.65 E-value=3.6e-07 Score=91.53 Aligned_cols=345 Identities=10% Similarity=-0.044 Sum_probs=184.9
Q ss_pred CeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCCCC
Q 008544 50 QHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGFTS 129 (562)
Q Consensus 50 ~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (562)
+||++++.+- |.. ....-+.+.|.+..+.++.++++.. . + +. ..... ....+.+
T Consensus 3 kkI~~v~GtR-~e~----~kl~pli~~l~~~~~~~~~li~tG~--H-----------~---~~----~~~~~-~~~~i~~ 56 (373)
T d1v4va_ 3 KRVVLAFGTR-PEA----TKMAPVYLALRGIPGLKPLVLLTGQ--H-----------R---EQ----LRQAL-SLFGIQE 56 (373)
T ss_dssp EEEEEEECSH-HHH----HHHHHHHHHHHTSTTEEEEEEECSS--C-----------H---HH----HHHHH-HTTTCCC
T ss_pred CeEEEEEEhh-HHH----HHHHHHHHHHHhCCCCCEEEEEccC--C-----------h---hh----hhCcc-hhcCCCc
Confidence 5899998765 321 2344466888776558999888732 0 0 00 00000 1112222
Q ss_pred CcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchHH
Q 008544 130 TFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRL 209 (562)
Q Consensus 130 ~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~ 209 (562)
+..+................+..+.+++.+.+||+|+++......+. ++..+...+-.+..++.....+.-..+
T Consensus 57 d~~l~~~~~~~s~~~~~~~~~~~~~~~l~~~kPD~vlv~GDr~e~la--~a~aa~~~~ipi~HiegG~rsg~~~~~---- 130 (373)
T d1v4va_ 57 DRNLDVMQERQALPDLAARILPQAARALKEMGADYVLVHGDTLTTFA--VAWAAFLEGIPVGHVEAGLRSGNLKEP---- 130 (373)
T ss_dssp SEECCCCSSCCCHHHHHHHHHHHHHHHHHHTTCSEEEEESSCHHHHH--HHHHHHHTTCCEEEETCCCCCSCTTSS----
T ss_pred cccCCCCCCCCCHHHHHHHHHHHHhhhhhhcCcccccccccCccchh--HHHHHHHhhhhheeecccccccccccC----
Confidence 22222211111111111223556778899999999999987655333 333444445334455542111110000
Q ss_pred HHHHHHHHHHHHHHHhccEEEEcChhhhccC-CC-----cccccc--ccCCCCcCcchhhhHHhhcCCCCCccEEEEEee
Q 008544 210 QAFLLEFVNSWLARVHCHKVIRLSAATQEYP-NS-----IVCNVH--GVNPKFLEIGEKKMEQQQNGNKAFTKGAYYIGR 281 (562)
Q Consensus 210 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~-~~-----~~~~v~--GVd~~~~~~~~~~~~~~~~~~~~~~~~il~vGr 281 (562)
......+..+.+. +|..+|.++..++.. +. .+.++- ++|. +... ..........+.....++..-+
T Consensus 131 --~~de~~R~~iskl-s~~hf~~t~~~~~~L~~~Ge~~~~I~~vG~p~~D~--i~~~-~~~~~~~~~~~~~~~~lvt~hr 204 (373)
T d1v4va_ 131 --FPEEANRRLTDVL-TDLDFAPTPLAKANLLKEGKREEGILVTGQTGVDA--VLLA-AKLGRLPEGLPEGPYVTVTMHR 204 (373)
T ss_dssp --TTHHHHHHHHHHH-CSEEEESSHHHHHHHHTTTCCGGGEEECCCHHHHH--HHHH-HHHCCCCTTCCSSCEEEECCCC
T ss_pred --cchhhhhhhhccc-cceeeecchhhhhhhhhhcccccceeecccchhhH--HHhh-hhhcccccccccccceeEEecc
Confidence 0112223344454 899999998887732 21 121110 1221 0000 0000111223344556677777
Q ss_pred ccccCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCH--HHHHHHHHhcCCeeEEeCC--CCChHHHHhhcCEEEEccCCCC
Q 008544 282 MVWSKGYEELLGLLNIYHKELAGLEMDLYGNGEDF--DQIQRAAKKLKLVVRVYPG--RDHADPIFHDYKVFLNPSTTDV 357 (562)
Q Consensus 282 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~--~~l~~~~~~l~l~~~~~~~--~~~~~~l~~~adv~v~pS~~E~ 357 (562)
....++...+++++..+.....++.+++....... ....+..+.. .++.++.. +.+.-.+++.|++++--|
T Consensus 205 ~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~-~n~~~~~~l~~~~~l~ll~~s~~vignS---- 279 (373)
T d1v4va_ 205 RENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGV-RNFVLLDPLEYGSMAALMRASLLLVTDS---- 279 (373)
T ss_dssp GGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTC-TTEEEECCCCHHHHHHHHHTEEEEEESC----
T ss_pred ccccchHHHHHHHHHHHhhhcccceeeeeecccccchhhhhhhhccc-ccceeeccchHHHHHHHhhhceeEeccc----
Confidence 77777888888999888888888887766543222 2222222222 24566544 334447788888888665
Q ss_pred CcHHHHHHHHcCCcEEeeCC-CC-ccccccCCceEeeCCHHHHHHHHHHHHhCCCCCccH-HHHhcCCHHHHHHHHHHHH
Q 008544 358 VCTATAEALAMGKIVVCANH-PS-NDFFKQFPNCRTYDGRNGFVEATLKALAEEPAQPTD-AQTHQLSWESATERFLQVA 434 (562)
Q Consensus 358 ~~~~~lEAma~G~PVI~t~~-~~-~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~~~l~~-~ar~~~sw~~~~~~~~~~y 434 (562)
|..+.||.++|+|+|.-+. +. .+-+..+.+-++..|.+++.+++.++++++...-.. ....-|.=..+.+++.+..
T Consensus 280 -ssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~nvlv~~d~~~I~~~i~~~l~~~~~~~~~~~~~npYGdG~as~rI~~~L 358 (373)
T d1v4va_ 280 -GGLQEEGAALGVPVVVLRNVTERPEGLKAGILKLAGTDPEGVYRVVKGLLENPEELSRMRKAKNPYGDGKAGLMVARGV 358 (373)
T ss_dssp -HHHHHHHHHTTCCEEECSSSCSCHHHHHHTSEEECCSCHHHHHHHHHHHHTCHHHHHHHHHSCCSSCCSCHHHHHHHHH
T ss_pred -chhhhcchhhcCcEEEeCCCccCHHHHhcCeeEEcCCCHHHHHHHHHHHHcCHHHHhhcccCCCCCCCCHHHHHHHHHH
Confidence 6678899999999999844 55 555666666554469999999999999876531110 1112233235556666655
Q ss_pred HhcC
Q 008544 435 ELVG 438 (562)
Q Consensus 435 ~~~~ 438 (562)
....
T Consensus 359 ~~~~ 362 (373)
T d1v4va_ 359 AWRL 362 (373)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 5444
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.63 E-value=8.2e-07 Score=88.77 Aligned_cols=73 Identities=10% Similarity=-0.005 Sum_probs=57.6
Q ss_pred eEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC----CHHHHHH
Q 008544 330 VRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD----GRNGFVE 400 (562)
Q Consensus 330 ~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~----d~~~la~ 400 (562)
+.+.. +.+..+++..+|+||. .+...++.|||++|+|+|+....+ .+.+++...|...+ +++++++
T Consensus 288 v~~~~-~~p~~~ll~~~~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~~~~~L~~ 362 (401)
T d1rrva_ 288 CFAID-EVNFQALFRRVAAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSA 362 (401)
T ss_dssp EEEES-SCCHHHHGGGSSEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHH
T ss_pred EEEEe-ccCcHHHhhhccEEEe----cCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCCCCHHHHHH
Confidence 44443 4567789999999994 467889999999999999986654 55666667787753 7899999
Q ss_pred HHHHHHh
Q 008544 401 ATLKALA 407 (562)
Q Consensus 401 ~i~~ll~ 407 (562)
+|.++++
T Consensus 363 ai~~vl~ 369 (401)
T d1rrva_ 363 ALTTVLA 369 (401)
T ss_dssp HHHHHTS
T ss_pred HHHHHhC
Confidence 9999985
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.36 E-value=7.1e-06 Score=81.94 Aligned_cols=321 Identities=10% Similarity=-0.005 Sum_probs=161.2
Q ss_pred cCCeEEEEecccCCCcccccccHHHHHHHHHHcCCCeEEEEeecCCccccccccCCCceeCCchhhHHHHHHHhhhccCC
Q 008544 48 KQQHIAIFTTASLPWLTGTAVNPLFRAAYLAKDGERRVTLVIPWLSLIHQKQVYPGNITFASPKEQEAYVRWWLEDRTGF 127 (562)
Q Consensus 48 ~~~rI~ivt~~~~P~~~G~a~~~~~la~~L~~~Gg~eVtvit~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~ 127 (562)
++|||++|+..- |.. .-..-+.+.|.+..+.++.++.+.. . ++ ..+.....+ ..
T Consensus 1 ~k~Ki~~v~GtR-~e~----~kl~pli~~l~~~~~~~~~li~tG~--H-----------~~---~~~~~~~~~-----~i 54 (377)
T d1o6ca_ 1 KKLKVMTVFGTR-PEA----IKMAPLVLELKKYPEIDSYVTVTAQ--H-----------RQ---MLDQVLDAF-----HI 54 (377)
T ss_dssp CCEEEEEEECSH-HHH----HHHHHHHHHGGGCTTEEEEEEECCS--C-----------GG---GTHHHHHHT-----TC
T ss_pred CCceEEEEEEch-HhH----HHHHHHHHHHHhCCCCCEEEEEeCC--C-----------HH---HHHHHHhhc-----CC
Confidence 368999998765 221 1234466888876557999988732 1 01 111111111 12
Q ss_pred CCCcccccccccchhccchhhhHHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhch
Q 008544 128 TSTFDTRFYPGKFAADKKSILAVGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKND 207 (562)
Q Consensus 128 ~~~~~i~~y~~r~~~~~~~~~~~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~ 207 (562)
.+++.+................+..+.+.+.+.+||+|++++.....+. ++..+...+-.+..+|.....+....+
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~kpD~v~v~GDr~e~la--~a~aa~~~~Ipi~HiegG~~s~~~~~~-- 130 (377)
T d1o6ca_ 55 KPDFDLNIMKERQTLAEITSNALVRLDELFKDIKPDIVLVHGDTTTTFA--GSLAAFYHQIAVGHVEAGLRTGNKYSP-- 130 (377)
T ss_dssp CCSEECCCCCTTCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHH--HHHHHHHTTCEEEEESCCCCCSCTTTT--
T ss_pred CCceeeecCCCCCCHHHHHHHHHHhhhhhhhhcccceeEeeecccccch--hhhhhhhccceEEEEeccccccccccc--
Confidence 2223222211111111111223456778888999999999987666444 455667766555666654322211100
Q ss_pred HHHHHHHHHHHHHHHHHhccEEEEcChhhhccC------CCccccc--cccCCC-CcCcchhhhHHhhcCCCCCccEEEE
Q 008544 208 RLQAFLLEFVNSWLARVHCHKVIRLSAATQEYP------NSIVCNV--HGVNPK-FLEIGEKKMEQQQNGNKAFTKGAYY 278 (562)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~------~~~~~~v--~GVd~~-~~~~~~~~~~~~~~~~~~~~~~il~ 278 (562)
..-...+..+.+. +|..++.++..++.. .+.+.++ .++|.- ......... ........+..+++.
T Consensus 131 ----~~de~~R~~iskl-s~~hf~~t~~~~~~L~~~G~~~~~I~~vG~~~~D~i~~~~~~~~~~-~~~~~~~~~~~ilvt 204 (377)
T d1o6ca_ 131 ----FPEELNRQMTGAI-ADLHFAPTGQAKDNLLKENKKADSIFVTGNTAIDALNTTVRDGYSH-PVLDQVGEDKMILLT 204 (377)
T ss_dssp ----TTHHHHHHHHHHH-CSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSSCCC-STTTTTTTSEEEEEC
T ss_pred ----Cchhhhccccccc-eeEEeecchhhhhhhhhhccccceEeeccchhHHHHHHHHHHHHhh-hhhhhccCCceEEEE
Confidence 0122233444555 899999998877732 1222222 123320 000000000 001111222344444
Q ss_pred Eeecccc-CCHHHHHHHHHHHHHhcCCcEEEEEeCCCCH--HHHHHHHHhcCCeeEEeCC--CCChHHHHhhcCEEEEcc
Q 008544 279 IGRMVWS-KGYEELLGLLNIYHKELAGLEMDLYGNGEDF--DQIQRAAKKLKLVVRVYPG--RDHADPIFHDYKVFLNPS 353 (562)
Q Consensus 279 vGr~~~~-Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~--~~l~~~~~~l~l~~~~~~~--~~~~~~l~~~adv~v~pS 353 (562)
.-+.... +.....+.++..+.....+..+++....... ..+.+... ...++.++.. +.+.-.+++.|+++|--|
T Consensus 205 ~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~ni~~~~~l~~~~fl~llk~s~~vIgnS 283 (377)
T d1o6ca_ 205 AHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHFG-DSDRVHLIEPLEVIDFHNFAAKSHFILTDS 283 (377)
T ss_dssp C----------HHHHHHHHHHHHHCTTEEEEEC----CHHHHHHHHC---CCSSEEECCCCCHHHHHHHHHHCSEEEEC-
T ss_pred eccccccccchHHHHHHHHhhcccccccccccccccccccchhhhhccc-cccceEeccccchHHHHHHHhhhheeeccc
Confidence 4444332 3344555666566566666666555433222 11111111 1223555544 334448899999988555
Q ss_pred CCCCCcHHHHHHHHcCCcEEeeCCCC--ccccccCCceEeeCCHHHHHHHHHHHHhCCC
Q 008544 354 TTDVVCTATAEALAMGKIVVCANHPS--NDFFKQFPNCRTYDGRNGFVEATLKALAEEP 410 (562)
Q Consensus 354 ~~E~~~~~~lEAma~G~PVI~t~~~~--~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~ 410 (562)
|..+.||-.+|+|+|.-.... .+.+..+.+-++..|.+++.+++.+++.++.
T Consensus 284 -----ss~i~Ea~~lg~P~Inir~~tERqe~~~~g~nilv~~~~~~I~~~i~~~l~~~~ 337 (377)
T d1o6ca_ 284 -----GGVQEEAPSLGKPVLVLRDTTERPEGVEAGTLKLAGTDEENIYQLAKQLLTDPD 337 (377)
T ss_dssp ------CHHHHGGGGTCCEEEECSCCC---CTTTTSSEEECSCHHHHHHHHHHHHHCHH
T ss_pred -----chhHHhhhhhhceEEEeCCCCcCcchhhcCeeEECCCCHHHHHHHHHHHHhChH
Confidence 445889999999999885543 5666666665544599999999999988754
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.19 E-value=1.1e-05 Score=79.80 Aligned_cols=74 Identities=11% Similarity=-0.004 Sum_probs=57.6
Q ss_pred eEEeCCCCChHHHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccccccCCceEeeC----CHHHHHH
Q 008544 330 VRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQFPNCRTYD----GRNGFVE 400 (562)
Q Consensus 330 ~~~~~~~~~~~~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~~~~g~~~~----d~~~la~ 400 (562)
+.+.+ +.+..++|..+|+||. .+...++.|||++|+|+|+....+ .+.+++...|...+ +++++++
T Consensus 287 v~~~~-~~p~~~~l~~~~~~V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ 361 (401)
T d1iira_ 287 CFAIG-EVNHQVLFGRVAAVIH----HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSA 361 (401)
T ss_dssp EEECS-SCCHHHHGGGSSEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHH
T ss_pred EEEEe-ccCHHHHHhhcCEEEe----cCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCCCCHHHHHH
Confidence 44444 4467889999999993 477899999999999999975543 45566666777652 7999999
Q ss_pred HHHHHHhC
Q 008544 401 ATLKALAE 408 (562)
Q Consensus 401 ~i~~ll~~ 408 (562)
+|.+++++
T Consensus 362 ai~~~l~~ 369 (401)
T d1iira_ 362 ALATALTP 369 (401)
T ss_dssp HHHHHTSH
T ss_pred HHHHHhCH
Confidence 99999954
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.86 E-value=0.00025 Score=70.22 Aligned_cols=246 Identities=11% Similarity=0.028 Sum_probs=134.6
Q ss_pred HHhHHhhcCcCCCcEEEecCCchhhhhhchHHHHhhcCCEEEEEcCCcHHHHhhhhchHHHHHHHHHHHHHHHHHhccEE
Q 008544 150 VGDITEIIPDEEADIAVLEEPEHLTWFHHGKRWKAKFRFVVGIVHTNYLEYVKREKNDRLQAFLLEFVNSWLARVHCHKV 229 (562)
Q Consensus 150 ~~~l~~~i~~~~pDvV~~~~~~~~~~~~~~~~~~~~~~~vi~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 229 (562)
+..+.+.+.+.+||+|+++....-.+. ++..+...+-.+..+|.-.....-.. ...-...+..+.+. +|..
T Consensus 75 i~~~~~~~~~~kPD~v~v~GDr~e~la--~a~aa~~~~ipi~HiegG~~s~~~~~------~~pde~~R~~iskl-s~~h 145 (376)
T d1f6da_ 75 LEGLKPILAEFKPDVVLVHGDTTTTLA--TSLAAFYQRIPVGHVEAGLRTGDLYS------PWPEEANRTLTGHL-AMYH 145 (376)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCHHHHH--HHHHHHTTTCCEEEESCCCCCSCTTS------STTHHHHHHHHHHT-CSEE
T ss_pred HHhhHHHHHhccCcceeeeccccchhh--HHHHHHhhCceEEEEecccccccccc------cCchhhhhhhhccc-eeEE
Confidence 445677788899999999987655333 44455665645556665321111000 00112233344555 8999
Q ss_pred EEcChhhhccC------CCccccc--cccCC------CCcCcch-hhhHHh-hcCCCCCccE-EEEEeecc-ccCCHHHH
Q 008544 230 IRLSAATQEYP------NSIVCNV--HGVNP------KFLEIGE-KKMEQQ-QNGNKAFTKG-AYYIGRMV-WSKGYEEL 291 (562)
Q Consensus 230 i~~S~~~~~~~------~~~~~~v--~GVd~------~~~~~~~-~~~~~~-~~~~~~~~~~-il~vGr~~-~~Kg~~~l 291 (562)
+|.++..++.. .+.+.++ .++|. ....... ...... ........+. ++..=+.. ..+..+.+
T Consensus 146 f~~~~~~~~~L~~~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i 225 (376)
T d1f6da_ 146 FSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEI 225 (376)
T ss_dssp EESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHH
T ss_pred EeccHHHHhHHHhcCCCccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceEEEecccchhhhhhHHHH
Confidence 99998877732 2222222 13331 0000000 000011 1112222333 33333332 34556788
Q ss_pred HHHHHHHHHhcCCcEEEEEeCCCCH--HHHHHHHHhcCCeeEEeCCC--CChHHHHhhcCEEEEccCCCCCcHHHHHHHH
Q 008544 292 LGLLNIYHKELAGLEMDLYGNGEDF--DQIQRAAKKLKLVVRVYPGR--DHADPIFHDYKVFLNPSTTDVVCTATAEALA 367 (562)
Q Consensus 292 l~a~~~l~~~~~~~~l~ivG~g~~~--~~l~~~~~~l~l~~~~~~~~--~~~~~l~~~adv~v~pS~~E~~~~~~lEAma 367 (562)
++++..+.....++.+++.-..... ......... ..++.++... .+.-.+++.|++++--| |..+.||-.
T Consensus 226 ~~~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~-~~ni~~~~~l~~~~fl~ll~~a~~vignS-----ssgi~Ea~~ 299 (376)
T d1f6da_ 226 CHALADIATTHQDIQIVYPVHLNPNVREPVNRILGH-VKNVILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPS 299 (376)
T ss_dssp HHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTT-CTTEEEECCCCHHHHHHHHHHCSEEEESS-----SGGGGTGGG
T ss_pred HHHHhhhhhhcceeEEecccccchhhhhhHhhhhcc-cccceeeccccHHHHHHHHhhceEEEecC-----cchHhhHHH
Confidence 8888888777667777665542221 222222222 2245665543 33347888999998666 446789999
Q ss_pred cCCcEEeeCCCC--ccccccCCceEeeCCHHHHHHHHHHHHhCCC
Q 008544 368 MGKIVVCANHPS--NDFFKQFPNCRTYDGRNGFVEATLKALAEEP 410 (562)
Q Consensus 368 ~G~PVI~t~~~~--~e~v~~~~~g~~~~d~~~la~~i~~ll~~~~ 410 (562)
+|+|+|.-..+. ++-+..+.+-.+..|.+++.+++.+++.++.
T Consensus 300 lg~P~Inir~~ter~~~~~~g~~i~v~~~~~~I~~ai~~~l~~~~ 344 (376)
T d1f6da_ 300 LGKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIVEEVTRLLKDEN 344 (376)
T ss_dssp GTCCEEECSSCCSCHHHHHHTSEEECCSSHHHHHHHHHHHHHCHH
T ss_pred hCCCEEEcCCCccCccceecCeeEECCCCHHHHHHHHHHHHhChH
Confidence 999999774433 5556555443333599999999999987653
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.69 E-value=0.004 Score=62.03 Aligned_cols=65 Identities=6% Similarity=-0.028 Sum_probs=48.5
Q ss_pred HHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----ccc-cccCCceEee----------CCHHHHHHHHHHH
Q 008544 342 IFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDF-FKQFPNCRTY----------DGRNGFVEATLKA 405 (562)
Q Consensus 342 l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~-v~~~~~g~~~----------~d~~~la~~i~~l 405 (562)
.+..+|+||.- |-..++.||+++|+|+|+....+ ... ++....|+.. -+.++++++|.++
T Consensus 345 ~~p~~~~fItH----GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~~~~~~t~~~l~~a~~~v 420 (461)
T d2acva1 345 AHKAIGGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDL 420 (461)
T ss_dssp HSTTEEEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHH
T ss_pred hcccCCEEEec----CCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeeccccccCCccCHHHHHHHHHHH
Confidence 44688999843 56789999999999999987654 233 3454566653 2679999999999
Q ss_pred HhCCC
Q 008544 406 LAEEP 410 (562)
Q Consensus 406 l~~~~ 410 (562)
|+++.
T Consensus 421 l~~d~ 425 (461)
T d2acva1 421 MDKDS 425 (461)
T ss_dssp TCTTC
T ss_pred hhCCH
Confidence 97644
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.64 E-value=0.00092 Score=66.97 Aligned_cols=77 Identities=12% Similarity=0.138 Sum_probs=55.6
Q ss_pred eeEEeCCCCChHHHH--hhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----cccccc-CCceEeeC----CHH
Q 008544 329 VVRVYPGRDHADPIF--HDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFFKQ-FPNCRTYD----GRN 396 (562)
Q Consensus 329 ~~~~~~~~~~~~~l~--~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v~~-~~~g~~~~----d~~ 396 (562)
++.+. ......+++ ..+++||.- |-..++.||+.+|+|+|+....+ ...+.+ ...|...+ +.+
T Consensus 320 nv~~~-~~~pq~~lL~hp~~~~fItH----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~t~~ 394 (450)
T d2c1xa1 320 YGMVV-PWAPQAEVLAHEAVGAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKS 394 (450)
T ss_dssp TEEEE-SCCCHHHHHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHH
T ss_pred ccccc-ccCChHhhhccCceeEEEcc----CCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCCCcCHH
Confidence 34443 444555667 567788843 56789999999999999997765 233443 46677653 899
Q ss_pred HHHHHHHHHHhCCC
Q 008544 397 GFVEATLKALAEEP 410 (562)
Q Consensus 397 ~la~~i~~ll~~~~ 410 (562)
++.++|.++|+|+.
T Consensus 395 ~l~~ai~~vL~d~~ 408 (450)
T d2c1xa1 395 GLMSCFDQILSQEK 408 (450)
T ss_dssp HHHHHHHHHHHSHH
T ss_pred HHHHHHHHHhcCcH
Confidence 99999999999864
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.60 E-value=0.00023 Score=71.70 Aligned_cols=79 Identities=14% Similarity=0.144 Sum_probs=57.4
Q ss_pred CCeeEEeCCCCChHHHH--hhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----cccc-ccCCceEeeC---CH
Q 008544 327 KLVVRVYPGRDHADPIF--HDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFF-KQFPNCRTYD---GR 395 (562)
Q Consensus 327 ~l~~~~~~~~~~~~~l~--~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v-~~~~~g~~~~---d~ 395 (562)
+.++.+. ...+..+++ ..+++||.- |-..++.||+.+|+|.|+....+ ...+ +....|...+ +.
T Consensus 345 ~~Nv~~~-~~~Pq~~lL~hp~~~~fItH----GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~ 419 (473)
T d2pq6a1 345 ADRGLIA-SWCPQDKVLNHPSIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKR 419 (473)
T ss_dssp TTTEEEE-SCCCHHHHHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCH
T ss_pred cCceEEe-eeCCHHHHhcCCcCcEEEec----CCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeCCCcCH
Confidence 3345443 345566778 477888843 66789999999999999997754 2334 4435677654 89
Q ss_pred HHHHHHHHHHHhCCC
Q 008544 396 NGFVEATLKALAEEP 410 (562)
Q Consensus 396 ~~la~~i~~ll~~~~ 410 (562)
++++++|.++++|+.
T Consensus 420 ~~l~~ai~~vl~d~~ 434 (473)
T d2pq6a1 420 EELAKLINEVIAGDK 434 (473)
T ss_dssp HHHHHHHHHHHTSHH
T ss_pred HHHHHHHHHHHcCCh
Confidence 999999999999864
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.62 E-value=0.044 Score=54.14 Aligned_cols=83 Identities=12% Similarity=0.062 Sum_probs=58.1
Q ss_pred EEeCCCCChHHHHh--hcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCCC-----cccc-ccCCceEee---C----CH
Q 008544 331 RVYPGRDHADPIFH--DYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPS-----NDFF-KQFPNCRTY---D----GR 395 (562)
Q Consensus 331 ~~~~~~~~~~~l~~--~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~~-----~e~v-~~~~~g~~~---~----d~ 395 (562)
.++.++.+..++++ .+++||.- |-..++.||+.+|+|+|+...-+ ...+ +.-..|... + +.
T Consensus 336 v~~~~w~Pq~~lL~hp~~~~fVtH----GG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~~~~~~t~ 411 (471)
T d2vcha1 336 FVIPFWAPQAQVLAHPSTGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRR 411 (471)
T ss_dssp EEEESCCCHHHHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCH
T ss_pred eeecccCCHHHHhcCccCCEEEec----CCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecCCCCcCCH
Confidence 34555667778885 67788833 56789999999999999987654 2223 333455543 1 78
Q ss_pred HHHHHHHHHHHhCCC-CCccHHH
Q 008544 396 NGFVEATLKALAEEP-AQPTDAQ 417 (562)
Q Consensus 396 ~~la~~i~~ll~~~~-~~l~~~a 417 (562)
+++.++|.++++|++ ..+++++
T Consensus 412 ~~l~~ai~~vl~~~~~~~~r~ra 434 (471)
T d2vcha1 412 EEVARVVKGLMEGEEGKGVRNKM 434 (471)
T ss_dssp HHHHHHHHHHHTSTHHHHHHHHH
T ss_pred HHHHHHHHHHhCCcHHHHHHHHH
Confidence 999999999999875 2444444
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=96.58 E-value=0.076 Score=50.48 Aligned_cols=108 Identities=17% Similarity=0.145 Sum_probs=66.9
Q ss_pred HhhcCCCCCccEEEEE-e-eccccCC--HHHHHHHHHHHHHhcCCcEEEEEeCCCCHHHHHHHHHhcC----CeeEEeCC
Q 008544 264 QQQNGNKAFTKGAYYI-G-RMVWSKG--YEELLGLLNIYHKELAGLEMDLYGNGEDFDQIQRAAKKLK----LVVRVYPG 335 (562)
Q Consensus 264 ~~~~~~~~~~~~il~v-G-r~~~~Kg--~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~l~~~~~~l~----l~~~~~~~ 335 (562)
....+...+.+.|++. | +....|. .+...+.+..+.++ +.+++++|.+.+.+..+...+... ..+.-+.+
T Consensus 171 ~~~~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~--~~~ivl~g~~~e~~~~~~~~~~~~~~~~~~~~~l~g 248 (348)
T d1pswa_ 171 CNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAG 248 (348)
T ss_dssp HHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTT
T ss_pred HHHhccccCCCeEEeccccchhhccccchHHHhhhHHHHhhc--CCccccccccchHHHHHHHHHhhhcccccccccccC
Confidence 3344555545555444 3 2223354 45677777777665 578888987666555544433222 12333555
Q ss_pred CCChH---HHHhhcCEEEEccCCCCCcHHHHHHHHcCCcEEeeCCC
Q 008544 336 RDHAD---PIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHP 378 (562)
Q Consensus 336 ~~~~~---~l~~~adv~v~pS~~E~~~~~~lEAma~G~PVI~t~~~ 378 (562)
..+.. .+++.+|++|.+. +..+--|.|+|+|+|+--.+
T Consensus 249 ~~sl~el~~li~~a~l~I~~D-----tg~~HlAaa~g~p~i~lfg~ 289 (348)
T d1pswa_ 249 ETQLDQAVILIAACKAIVTND-----SGLMHVAAALNRPLVALYGP 289 (348)
T ss_dssp TSCHHHHHHHHHTSSEEEEES-----SHHHHHHHHTTCCEEEEESS
T ss_pred CccHHHHHHHHhcceeEeecC-----ccHHHHHHHcCCCEEEEECC
Confidence 44444 7888999999886 33678899999999998443
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=94.23 E-value=0.2 Score=52.78 Aligned_cols=125 Identities=13% Similarity=0.003 Sum_probs=84.6
Q ss_pred CCCCccEEEEEeeccccCCHHHHHHHHH----HHHHhc----CCcEEEEEeCC-CCH---HHHH----HHHHh------c
Q 008544 269 NKAFTKGAYYIGRMVWSKGYEELLGLLN----IYHKEL----AGLEMDLYGNG-EDF---DQIQ----RAAKK------L 326 (562)
Q Consensus 269 ~~~~~~~il~vGr~~~~Kg~~~ll~a~~----~l~~~~----~~~~l~ivG~g-~~~---~~l~----~~~~~------l 326 (562)
++++...++|+-|+..+|...+++.-.. .++... ..+++++.|.- |.. +++- +.++. .
T Consensus 522 ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~ 601 (796)
T d1l5wa_ 522 INPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLV 601 (796)
T ss_dssp CCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTT
T ss_pred cChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhh
Confidence 4567788999999999999887543333 332211 13788888872 221 2222 22221 1
Q ss_pred C--CeeEEeCCCCC--hHHHHhhcCEEEEccC--CCCCcHHHHHHHHcCCcEEeeCCCC-cccccc--CCceEeeC
Q 008544 327 K--LVVRVYPGRDH--ADPIFHDYKVFLNPST--TDVVCTATAEALAMGKIVVCANHPS-NDFFKQ--FPNCRTYD 393 (562)
Q Consensus 327 ~--l~~~~~~~~~~--~~~l~~~adv~v~pS~--~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~--~~~g~~~~ 393 (562)
+ +++.|+..++- .+.++..+||-++.++ .|..|+.-+=||.-|.+.+++--|. .|...+ +.|||++.
T Consensus 602 ~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~fG 677 (796)
T d1l5wa_ 602 GDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp GGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHhcCccceEEec
Confidence 1 13444555432 2278889999999885 8999999999999999999997776 666654 78999985
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=93.46 E-value=0.34 Score=51.07 Aligned_cols=126 Identities=13% Similarity=0.061 Sum_probs=86.1
Q ss_pred CCCCCccEEEEEeeccccCCHHH----HHHHHHHHHHhc----CCcEEEEEeCC-CCH---HHHHHHHHhc---------
Q 008544 268 GNKAFTKGAYYIGRMVWSKGYEE----LLGLLNIYHKEL----AGLEMDLYGNG-EDF---DQIQRAAKKL--------- 326 (562)
Q Consensus 268 ~~~~~~~~il~vGr~~~~Kg~~~----ll~a~~~l~~~~----~~~~l~ivG~g-~~~---~~l~~~~~~l--------- 326 (562)
.+.++...++++-|+..+|...+ ++..+.++++.. ..+++++.|.- |.. +++-+.+.+.
T Consensus 545 ~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~~gK~iIk~I~~va~~in~dp~ 624 (824)
T d2gj4a1 545 HINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPV 624 (824)
T ss_dssp CCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTT
T ss_pred CCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcChh
Confidence 35667788899999999999887 333445555421 24788888872 221 2222222211
Q ss_pred -C--CeeEEeCCCC--ChHHHHhhcCEEEEccC--CCCCcHHHHHHHHcCCcEEeeCCCC-cccccc--CCceEeeC
Q 008544 327 -K--LVVRVYPGRD--HADPIFHDYKVFLNPST--TDVVCTATAEALAMGKIVVCANHPS-NDFFKQ--FPNCRTYD 393 (562)
Q Consensus 327 -~--l~~~~~~~~~--~~~~l~~~adv~v~pS~--~E~~~~~~lEAma~G~PVI~t~~~~-~e~v~~--~~~g~~~~ 393 (562)
+ +++.|+..++ -.+.++..+||..+.|+ .|..|+.-+=||.-|.+.+++--|. .|+.++ +.|||++.
T Consensus 625 ~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG 701 (824)
T d2gj4a1 625 VGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFG 701 (824)
T ss_dssp TGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred hccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccEEEeC
Confidence 1 1244555543 22378899999999985 8999999999999999999997776 666654 67899974
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