Citrus Sinensis ID: 008591

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560
MLNPQVHHQSQSIRTLCPLPKPFLRGNGQAFRPAQLNPSFKKASKIGVGFSPSNNSIKAIFNLTEKSTKVKAVITVKPIIPDPLALSSLVGALGLELVSAELDPKTGEEKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHCQPETQCNASNQ
cccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccEEEEccccEEEEEEEEEEEEcccccHHHHcccccEEEEEEEEEcccccccccccccccccccccccccccEEEEEEEEEccccccEEEEEEEEcccccEEEEEEEEEccccccEEEEEcccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHccccccccEEccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHcccccEEEEcccccccccccccccccccccccHHHHHHHHccccHHHHHHHcccEEEEcccccccccccccccccccEEEEEEEEEEEccccccccEEEEEEccccccccccccEEEccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccc
cccccEEEcccccccccccccccccccccccccccccHHHcccccEEEcccccccEEEEEEEEEEccEEEEEEEEcccccccHHHHHHccccEEEEEEEEcccccccccccccHHHHHHcccccccccEEEEEEEEEccccccccEEEEEEccccEEEEEEEEEcccccccEEEEEEEEEcEHHHccccEEEEccccccHHHccHHHHHHHHHHHHHHHcccccccccccccccEEcEcccccccccHHHcccccccccccccEEcccccEcccccccEcccccccccHHHccccccHHHcHHHHHHHHHHcHHHHHHHHHcccccccccHHHHHHHHHccccccccHHHHHHHccccccHHHHcEccccccEEccccccccccccHHHcHHHHHHHHHHcccccccEEccccccccccccccccccccccccccccccccccccHHHHHHcccEEEEEcHHHHHHHHHHHHccccccccEEEEEEEEcccccEEEEEEEEEEccccccccccEEEccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccc
mlnpqvhhqsqsirtlcplpkpflrgngqafrpaqlnpsfkkaskigvgfspsnnsIKAIFNLTEKSTKVKAVItvkpiipdplaLSSLVGALGLELVsaeldpktgeekptikGLALgvlgkdddgnikykaelkipasfgdvGAILVESDQLTEMYLQDIvldglpngpvnltcdswiqpkivdkqKRIFftnksylpsqtpnglKRLRAEELNnlqgdgqgerkrheriydydvyndlalpeikelarpvlggeehpyprrcrtgrpksfadpasesrsvsiyvprdeafadiklgqfsassLYSGLHALVPFLEAILIdkdlgfsslSDIDKVFNegielppelkdqplwqKILPILFKTVsntgkevfrfdtpetvdrdkffwirneefgretlaglnpysikllsqlplkstldpeiygppesaiTTELIEQEIGGLMTVNEAIKQKKLFIIDYHDAllpyvgklrqiegstlygsralfflnpdgtlrplaieltrppldgkpqwkqvftpsrhstdSWLWTLAKAHFLVHDTGYhqlishcqpetqcnasnq
mlnpqvhhqsqsirtlcplPKPFLRGNGQAFRPAQLNPSFKKASkigvgfspsnNSIKAIFNLTEKSTKVKAVITVKPIIPDPLALSSLVGALGLELVSAeldpktgeekptikglalgvlgkdDDGNIKYKAElkipasfgdVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFtnksylpsqtpnglKRLRAEELnnlqgdgqgerkrherIYDYDVYNDLALPEIKELarpvlggeehpyprrcrtgrpksfadpasesrsvsiYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKtvsntgkevfrfdtpetvdrdkfFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHCQPETQCNASNQ
MLNPQVHHQSQSIRTLCPLPKPFLRGNGQAFRPAQLNPSFKKASKIGVGFSPSNNSIKAIFNLTEKSTKVKAVITVKPIIPDPlalsslvgalglelvsaELDPKTGEEKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHCQPETQCNASNQ
**********************************************GVGF****NSIKAIFNLTEKSTKVKAVITVKPIIPDPLALSSLVGALGLELVSAEL*********TIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYL*******************************RIYDYDVYNDLALPEIKELARPVL*****************************SIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHC***********
*******************************************************************TKVKAVITVKPIIPDPLALSSLVGALGLEL*********************GVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTR************FTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHCQPETQCNASNQ
*************RTLCPLPKPFLRGNGQAFRPAQLNPSFKKASKIGVGFSPSNNSIKAIFNLTEKSTKVKAVITVKPIIPDPLALSSLVGALGLELVSAELDPKTGEEKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQ********RHERIYDYDVYNDLALPEIKELARPVLGGEEHPYPRRCRTGR************SVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHCQPETQCNASNQ
***PQVHHQSQSIRTLCPLPKPFLRGNGQAF****L******ASKIGVGFSPSNNSIKAIFNLTEKSTKVKAVITVKPIIPDPLALSSLVGALGLELVSAELDPKTGEEKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHCQPETQCNASNQ
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLNPQVHHQSQSIRTLCPLPKPFLRGNGQAFRPAQLNPSFKKASKIGVGFSPSNNSIKAIFNLTEKSTKVKAVITVKPIIPDPLALSSLVGALGLELVSAELDPKTGEEKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHCQPETQCNASNQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query560 2.2.26 [Sep-21-2011]
O24370 899 Linoleate 13S-lipoxygenas N/A no 0.991 0.617 0.519 1e-163
P38419 924 Lipoxygenase 7, chloropla yes no 0.866 0.524 0.493 1e-133
Q8GSM2 896 Lipoxygenase 2.3, chlorop N/A no 0.798 0.498 0.501 1e-132
Q84YK8 941 Probable lipoxygenase 8, no no 0.842 0.501 0.496 1e-130
P93184 936 Lipoxygenase 2.1, chlorop N/A no 0.866 0.518 0.496 1e-128
P38418 896 Lipoxygenase 2, chloropla yes no 0.808 0.505 0.482 1e-123
Q8GSM3 932 Lipoxygenase 2.2, chlorop N/A no 0.823 0.494 0.472 1e-114
Q7XV13 899 Putative lipoxygenase 5 O no no 0.833 0.519 0.450 1e-113
Q8H016 918 Probable lipoxygenase 6 O no no 0.814 0.496 0.449 1e-107
Q9FNX8 926 Lipoxygenase 4, chloropla no no 0.862 0.521 0.409 1e-104
>sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1 Back     alignment and function desciption
 Score =  577 bits (1486), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 301/579 (51%), Positives = 402/579 (69%), Gaps = 24/579 (4%)

Query: 1   MLNPQVHHQSQSIRTLCPL--PKPFLRGNGQAFRPAQLNPSFKKASKIGVGFSPSNN--- 55
           ML PQ+   SQS + L P     P       +F    LN +F+   K       + N   
Sbjct: 1   MLKPQLQQSSQSTKALIPSWNTNPLFLA---SFPINILNKNFRLKKKNNFRVHHNYNGAS 57

Query: 56  SIKAIFNLTEKSTKVKAVITVKPIIPDPLA-----LSSLVG-ALGLELVSAELDPKTGEE 109
           + KA+ + TEK+T VKAV+TV+  +   L+     +  L+G +L L +V+AELD KTG E
Sbjct: 58  TTKAVLSSTEKATGVKAVVTVQKQVNLNLSRGLDDIGDLLGKSLLLWIVAAELDHKTGIE 117

Query: 110 KPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN 169
           KP I+  A    G+D DG+  Y+A+  IP  FG+VGAIL+E++   EMY+++IV+DG  +
Sbjct: 118 KPGIRAYAH--RGRDVDGDTHYEADFVIPQDFGEVGAILIENEHHKEMYVKNIVIDGFVH 175

Query: 170 GPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRH 229
           G V +TC+SW+  K  +  KRIFFTNKSYLPSQTP+G+ RLR EEL  L+GDG GERK  
Sbjct: 176 GKVEITCNSWVHSKFDNPDKRIFFTNKSYLPSQTPSGVSRLREEELVTLRGDGIGERKVF 235

Query: 230 ERIYDYDVYNDLALPEIK--ELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYV 287
           ERIYDYDVYNDL   +    +  RPVLGG+E PYPRRC+TGRP+S  DP SE+RS  +YV
Sbjct: 236 ERIYDYDVYNDLGEADSNNDDAKRPVLGGKELPYPRRCKTGRPRSKKDPLSETRSTFVYV 295

Query: 288 PRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPE 347
           PRDEAF+++K   FS +++YS LHA+VP LE+++ D +LGF     ID +FN G++LP  
Sbjct: 296 PRDEAFSEVKSVAFSGNTVYSVLHAVVPALESVVTDPNLGFPHFPAIDSLFNVGVDLPGL 355

Query: 348 LKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSI 407
              +     ++P L K +S+T K+V  F++P+ V RDKF W R+ EF R+TLAGLNPYSI
Sbjct: 356 GDKKSGLFNVVPRLIKAISDTRKDVLLFESPQLVQRDKFSWFRDVEFARQTLAGLNPYSI 415

Query: 408 KLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPY 467
           +L+++ PL+S LDP++YGPPES IT ELIE+EIG  MTV +A++QKKLFI+DYHD LLPY
Sbjct: 416 RLVTEWPLRSKLDPKVYGPPESEITKELIEKEIGNYMTVEQAVQQKKLFILDYHDLLLPY 475

Query: 468 VGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSR-HSTDSW 526
           V K+ +++GS LYGSR +FFL P GTL+PLAIELTRPP+D KPQWK+V++P+  ++T +W
Sbjct: 476 VNKVNELKGSMLYGSRTIFFLTPQGTLKPLAIELTRPPVDDKPQWKEVYSPNDWNATGAW 535

Query: 527 LWTLAKAHFLVHDTGYHQLIS-----HCQPETQCNASNQ 560
           LW LAKAH L HD+GYHQL+S     HC  E    ASN+
Sbjct: 536 LWKLAKAHVLSHDSGYHQLVSHWLRTHCCTEPYIIASNR 574
Plant lipoxygenase involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence. May not be involved in the bulk production of jasmonate upon wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Linolenic acid is the preferred substrate, before linoleic and arachidonic acids. Has also some activity with phosphatidylglycerol, but not with galactolipids.
Solanum tuberosum (taxid: 4113)
EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 1EC: 2
>sp|P38419|LOXC1_ORYSJ Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2 Back     alignment and function description
>sp|Q8GSM2|LOX23_HORVU Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1 Back     alignment and function description
>sp|Q84YK8|LOXC2_ORYSJ Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1 Back     alignment and function description
>sp|P93184|LOX21_HORVU Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1 Back     alignment and function description
>sp|P38418|LOX2_ARATH Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1 Back     alignment and function description
>sp|Q8GSM3|LOX22_HORVU Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1 Back     alignment and function description
>sp|Q7XV13|LOX5_ORYSJ Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2 Back     alignment and function description
>sp|Q8H016|LOX6_ORYSJ Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2 Back     alignment and function description
>sp|Q9FNX8|LOX4_ARATH Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query560
71999169 898 lipoxygenase LOX1 [Populus deltoides] 0.980 0.611 0.580 0.0
224103783565 predicted protein [Populus trichocarpa] 0.969 0.961 0.579 0.0
224053392 897 predicted protein [Populus trichocarpa] 0.989 0.617 0.565 0.0
71999171 903 lipoxygenase LOX2 [Populus deltoides] 0.982 0.609 0.551 1e-180
255544764 900 lipoxygenase, putative [Ricinus communis 0.975 0.606 0.576 1e-178
229554825 901 lipoxygenase [Camellia sinensis] 0.992 0.617 0.558 1e-175
312837045 889 lipoxygenase [Vitis hybrid cultivar] 0.985 0.620 0.551 1e-175
213876486 900 lipoxygenase [Camellia sinensis] 0.982 0.611 0.540 1e-174
225435556 901 PREDICTED: linoleate 13S-lipoxygenase 2- 0.989 0.614 0.548 1e-174
308943877 901 lipoxygenase [Camellia sinensis] 0.989 0.614 0.560 1e-173
>gi|71999169|gb|AAZ57444.1| lipoxygenase LOX1 [Populus deltoides] Back     alignment and taxonomy information
 Score =  668 bits (1723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/568 (58%), Positives = 421/568 (74%), Gaps = 19/568 (3%)

Query: 1   MLNPQVHHQSQSIRTLCPLPKPFLRGNGQAFRPA-QLNPSFKKASKIGVGFSPSNNSIKA 59
           ML PQ+H    S +    LPKPF+ G+G A  P    + S K   K+ VG+   + SIK+
Sbjct: 1   MLKPQLHQSQLSTKNPFLLPKPFIHGSGHASFPVYSRSLSTKANKKVRVGYK--HGSIKS 58

Query: 60  IFNLTEKSTKVKAVITVKPIIPDPLA----------LSSLVG-ALGLELVSAELDPKTGE 108
           I ++T++ST +KAV+TVK  + D              + L G  L LELVSAELDPKTG 
Sbjct: 59  IASVTQQSTDIKAVVTVKETVVDFWTEIGIERGLDDFTDLFGKTLLLELVSAELDPKTGL 118

Query: 109 EKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLP 168
           EKP+I+  A  +  + +D  IKY+A+  +P  FG+VGAI VE++   EMYL D+VLDG P
Sbjct: 119 EKPSIRKYAHKIDHEGED--IKYEADFVVPPDFGEVGAIFVENEHHKEMYLHDVVLDGFP 176

Query: 169 NGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKR 228
            GPV++TCDSWI PK  +K+KR+FFTNKSYLPS+TPNGL +LR EEL  L+G+  GERK+
Sbjct: 177 TGPVHVTCDSWIHPKFDNKKKRLFFTNKSYLPSETPNGLTKLRKEELETLRGNDSGERKK 236

Query: 229 HERIYDYDVYNDLALPEIK-ELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYV 287
            ERIYDYDVYNDL  P+   E ARPVLGG+EHPYPRRCRTGRP++ +DP +E+RS S YV
Sbjct: 237 GERIYDYDVYNDLGNPDSDPETARPVLGGQEHPYPRRCRTGRPRTESDPLTETRSSSFYV 296

Query: 288 PRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPE 347
           PRDE F++IK+G FSA +L S LHALVP L   ++D DLGF   S ID +FNEGI LPP 
Sbjct: 297 PRDEEFSEIKMGTFSARTLKSVLHALVPSLSTAIVDSDLGFPFFSSIDALFNEGINLPP- 355

Query: 348 LKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSI 407
           LK Q  W+ +LP LF+ +++  K++ +F+TPET++RD+FFW R+EEF R+TL+GLNP SI
Sbjct: 356 LKKQGFWKDLLPNLFRAITDGTKDILKFETPETMERDRFFWFRDEEFARQTLSGLNPCSI 415

Query: 408 KLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPY 467
           K++++ PL+S LDPEIYGP ESAITTE++EQEI G MT  +A+K +KLFI+DYHD  LP+
Sbjct: 416 KMVTEWPLRSKLDPEIYGPQESAITTEMVEQEIKGFMTCGQAVKDQKLFILDYHDLFLPF 475

Query: 468 VGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWL 527
           V K+R+++G+TLYGSR LFFL  +GTLRPLAIELTRPP+DGKPQWKQVF P+ HSTD WL
Sbjct: 476 VSKIRELKGTTLYGSRTLFFLTHEGTLRPLAIELTRPPMDGKPQWKQVFRPTWHSTDVWL 535

Query: 528 WTLAKAHFLVHDTGYHQLISHCQPETQC 555
           W LAKAH L H++GYHQLISH    T C
Sbjct: 536 WRLAKAHVLAHESGYHQLISHWL-RTHC 562

Source: Populus deltoides

Species: Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224103783|ref|XP_002334016.1| predicted protein [Populus trichocarpa] gi|222839571|gb|EEE77908.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224053392|ref|XP_002297796.1| predicted protein [Populus trichocarpa] gi|222845054|gb|EEE82601.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|71999171|gb|AAZ57445.1| lipoxygenase LOX2 [Populus deltoides] Back     alignment and taxonomy information
>gi|255544764|ref|XP_002513443.1| lipoxygenase, putative [Ricinus communis] gi|223547351|gb|EEF48846.1| lipoxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|229554825|gb|ACQ76787.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|312837045|dbj|BAJ34928.1| lipoxygenase [Vitis hybrid cultivar] Back     alignment and taxonomy information
>gi|213876486|gb|ACJ54281.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|225435556|ref|XP_002285574.1| PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic [Vitis vinifera] gi|297746381|emb|CBI16437.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|308943877|gb|ADO51752.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query560
UNIPROTKB|P38419 924 CM-LOX1 "Lipoxygenase 7, chlor 0.807 0.489 0.507 2.8e-121
TAIR|locus:2096915 896 LOX2 "lipoxygenase 2" [Arabido 0.783 0.489 0.493 3.1e-115
TAIR|locus:2030215 926 LOX4 "lipoxygenase 4" [Arabido 0.791 0.478 0.427 4.5e-98
TAIR|locus:2018848 919 LOX3 "lipoxygenase 3" [Arabido 0.792 0.483 0.416 4.7e-96
TAIR|locus:2008808 917 LOX6 "lipoxygenase 6" [Arabido 0.794 0.485 0.425 3e-94
TAIR|locus:2011030 859 LOX1 "lipoxygenase 1" [Arabido 0.741 0.483 0.437 4.4e-84
TAIR|locus:2087837 886 LOX5 [Arabidopsis thaliana (ta 0.723 0.457 0.413 3e-78
UNIPROTKB|P29250 870 LOX1.1 "Linoleate 9S-lipoxygen 0.716 0.460 0.407 1.6e-72
UNIPROTKB|H9L001 681 Gga.6903 "Uncharacterized prot 0.248 0.204 0.312 9.7e-07
UNIPROTKB|E2RS18 811 ALOXE3 "Uncharacterized protei 0.246 0.170 0.301 3.5e-05
UNIPROTKB|P38419 CM-LOX1 "Lipoxygenase 7, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
 Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
 Identities = 238/469 (50%), Positives = 323/469 (68%)

Query:   101 ELDPKTGEEKPTIKGLALGVLGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQ 160
             ELD KTG+EK T++  A  V   DD   + Y+A+  +P+ FG +GAI+V ++   EM+L+
Sbjct:   122 ELDAKTGKEKATVRSYAHNV-DDDDHSVVTYEADFDVPSGFGPIGAIIVTNELRQEMFLE 180

Query:   161 DIVL---DGLPNGPV-NLTCDSWIQPKIVDKQ----KRIFFTNKSYLPSQTPNGLKRLRA 212
             DI L   DG  N  V  + C+SW+QPK V  +    KRIFF NK+YLP QTP GL+  R 
Sbjct:   181 DINLTASDGAGNSTVLPIRCNSWVQPKSVGDEGTPSKRIFFANKTYLPGQTPAGLRSYRK 240

Query:   213 EELNNLQGDGQGERKRHERIYDYDVYNDLALPEIK-ELARPVLGG-EEHPYPRRCRTGRP 270
              +L   +GDG GER+  +R+YDYDVYNDL  P+   +LARPVLGG ++ PYPRRCRTGRP
Sbjct:   241 NDLQQKRGDGTGEREADDRVYDYDVYNDLGNPDSNGDLARPVLGGNKQFPYPRRCRTGRP 300

Query:   271 KSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDK---DLG 327
              S  DP SE+R  ++YVPRDE F+  K   F   ++ S L A VP  +++L+DK   +L 
Sbjct:   301 PSKKDPKSETRKGNVYVPRDEEFSPEKEDYFLRKTVGSVLQAAVPAAQSLLLDKLKWNLP 360

Query:   328 FSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKE-VFRFDTPETVDRDKF 386
             F S   IDK+F +G+ELP   K   L + ++P L + + +T  E + RF+TP  + +DKF
Sbjct:   361 FPSFFVIDKLFEDGVELPGVDKLNFL-ESVVPRLLEHLRDTPAEKILRFETPANIQKDKF 419

Query:   387 FWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTV 446
              W+R+EEF RETLAG+NPY+I+L+ + PLKS LDP +YGP ESAIT +L+E+++  +MTV
Sbjct:   420 AWLRDEEFARETLAGINPYAIELVREFPLKSKLDPAVYGPAESAITADLLEEQMRRVMTV 479

Query:   447 NEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPL 506
              EAI QK+LF++D+HD  LPYV K+R ++ +T+YGSR +FFL  DGTL+ LAIELTRP  
Sbjct:   480 EEAISQKRLFMLDFHDLFLPYVHKIRSLDHTTMYGSRTVFFLTDDGTLQLLAIELTRPAS 539

Query:   507 DGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHCQPETQC 555
               +PQW+QVFTPS  +T SWLW +AKAH   HD G+H+LI+H    T C
Sbjct:   540 PSQPQWRQVFTPSTDATMSWLWRMAKAHVRAHDAGHHELITHWL-RTHC 587
GO:0009607 "response to biotic stimulus" evidence=ISS;IMP
GO:0009611 "response to wounding" evidence=ISS;IMP
GO:0016166 "phytoene dehydrogenase activity" evidence=ISS;IDA
GO:0051707 "response to other organism" evidence=ISS;IDA
TAIR|locus:2096915 LOX2 "lipoxygenase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030215 LOX4 "lipoxygenase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018848 LOX3 "lipoxygenase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008808 LOX6 "lipoxygenase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011030 LOX1 "lipoxygenase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087837 LOX5 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P29250 LOX1.1 "Linoleate 9S-lipoxygenase 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|H9L001 Gga.6903 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2RS18 ALOXE3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.13.11.12LOW CONFIDENCE prediction!
3rd Layer1.13.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_I000375
hypothetical protein; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity) (897 aa)
(Populus trichocarpa)
Predicted Functional Partners:
CYP74A1
cytochrome P450 allene oxide synthase (EC-4.2.1.92) (526 aa)
     •• 0.902
gw1.XVIII.245.1
SubName- Full=Putative uncharacterized protein; (138 aa)
     •  0.899
gw1.XVI.1394.1
hypothetical protein (823 aa)
     •  0.899
gw1.40.286.1
phospholipase A1 (EC-3.1.1.32) (357 aa)
     •  0.899
fgenesh4_pg.C_LG_II001255
phospholipase A1 (EC-3.1.1.32) (367 aa)
     •  0.899
eugene3.00060391
hypothetical protein (856 aa)
     •  0.899
CYP74B7
cytochrome P450 fatty acid hydroperoxide lyase (492 aa)
     •  0.899
estExt_fgenesh4_pg.C_LG_VIII0936
SubName- Full=Putative uncharacterized protein; (642 aa)
     •  0.899
grail3.0064002701
SubName- Full=Putative uncharacterized protein; (382 aa)
      • 0.502

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query560
PLN02305 918 PLN02305, PLN02305, lipoxygenase 1e-150
PLN02264 919 PLN02264, PLN02264, lipoxygenase 1e-142
PLN02337 866 PLN02337, PLN02337, lipoxygenase 1e-138
pfam00305 667 pfam00305, Lipoxygenase, Lipoxygenase 1e-128
cd01751137 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipox 3e-35
smart00308105 smart00308, LH2, Lipoxygenase homology 2 (beta bar 2e-12
pfam01477115 pfam01477, PLAT, PLAT/LH2 domain 2e-08
>gnl|CDD|215174 PLN02305, PLN02305, lipoxygenase Back     alignment and domain information 
 Score =  454 bits (1169), Expect = e-150
 Identities = 228/532 (42%), Positives = 321/532 (60%), Gaps = 27/532 (5%)

Query: 36  LNPSFKKA---SKIGVGFSPSNNSIKAIFNLTEKSTKVKAVITVKPIIPDPLA------L 86
           +  S  ++   S  G    PS+ S  A          V+AVIT++  I + +        
Sbjct: 53  VEESGGESANKSVDGSSLLPSSRSKYA------GGIDVRAVITIRKKIKEKITEKFEDQW 106

Query: 87  SSLVGALG----LELVSAELDPKTGEEKPTIKGLALGVLGK--DDDGNIKYKAELKIPAS 140
              +  +G    ++LVS E+DP TG  K +++    G L K  +D   ++Y A+  +P  
Sbjct: 107 EYFMNGIGQGILIQLVSEEIDPVTGSGK-SVESSVRGWLPKPSNDPHIVEYAADFTVPFD 165

Query: 141 FGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLP 200
           FG  GA+LV +    E YL +IV+ G  +GP+    ++WI  +  + + RI F N++YLP
Sbjct: 166 FGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLP 225

Query: 201 SQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKE-LARPVLGGEEH 259
           SQTP G+K LR E+L +L+G+G+GERK H+RIYDY  YNDL  P+  E LARPVLGGEE 
Sbjct: 226 SQTPPGIKDLRREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEW 285

Query: 260 PYPRRCRTGRPKSFADPASESRSVS---IYVPRDEAFADIKLGQFSASSLYSGLHALVPF 316
           PYPRRCRTGRP +  DP  ESR      +YVPRDE F +IK   FSA  L + LH L+P 
Sbjct: 286 PYPRRCRTGRPPTKKDPLCESRIEKPHPVYVPRDETFEEIKRNTFSAGRLKALLHNLIPS 345

Query: 317 LEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVFRFD 376
           + A L   D+ F+  SDIDK++N+GI L  E          L    K V +  + + ++D
Sbjct: 346 IAAALSSSDIPFTCFSDIDKLYNDGILLKTEEPKDIGLNPFLGNFMKQVLSVSERLLKYD 405

Query: 377 TPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELI 436
            P  + RD+F W+R+ EF R+ LAG+NP +I++L + P+ S LDP +YGPPESA+T ELI
Sbjct: 406 IPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELI 465

Query: 437 EQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRP 496
           E+E+ G MTV +AI++K+LFI+DYHD LLP++ K+  +     Y SR +FF +  G LRP
Sbjct: 466 ERELEG-MTVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRP 524

Query: 497 LAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISH 548
           +AIEL+ PP    P  K V+T    +T  W+W LAKAH   +D G HQL++H
Sbjct: 525 IAIELSLPPTPSSPGNKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNH 576

Length = 918
>gnl|CDD|215148 PLN02264, PLN02264, lipoxygenase Back     alignment and domain information
>gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase Back     alignment and domain information
>gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase Back     alignment and domain information
>gnl|CDD|238849 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipoxygenase related proteins Back     alignment and domain information
>gnl|CDD|214608 smart00308, LH2, Lipoxygenase homology 2 (beta barrel) domain Back     alignment and domain information
>gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 560
PLN02305 918 lipoxygenase 100.0
PLN02264 919 lipoxygenase 100.0
PLN02337 866 lipoxygenase 100.0
PF00305 667 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Li 100.0
cd01751137 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase re 100.0
smart00308105 LH2 Lipoxygenase homology 2 (beta barrel) domain. 99.31
PF01477113 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg 98.92
cd00113116 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin 98.67
cd02899109 PLAT_SR Scavenger receptor protein. A subfamily of 98.57
cd01753113 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u 98.16
cd01756120 PLAT_repeat PLAT/LH2 domain repeats of family of p 98.08
cd01752120 PLAT_polycystin PLAT/LH2 domain of polycystin-1 li 97.93
cd01757114 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter 97.8
cd01754129 PLAT_plant_stress PLAT/LH2 domain of plant-specifi 97.8
>PLN02305 lipoxygenase Back     alignment and domain information 
Probab=100.00  E-value=7.4e-159  Score=1324.52  Aligned_cols=488  Identities=44%  Similarity=0.810  Sum_probs=459.6

Q ss_pred             ceeEEEEEEEeeccCCc--------c-ccccccc-cEEEEEEecccCCCCCC---CccccccccccCCCCCCCCceEEEE
Q 008591           67 STKVKAVITVKPIIPDP--------L-ALSSLVG-ALGLELVSAELDPKTGE---EKPTIKGLALGVLGKDDDGNIKYKA  133 (560)
Q Consensus        67 ~~~~~~~~~~~~~~~~~--------~-~~~~~~g-~v~lqLvS~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~y~~  133 (560)
                      +.+|||+|+||++++++        + +++|++| +|+|||||+++|++||+   ++++|++|+++....+  ++++|+|
T Consensus        81 ~~~i~~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~gk~~~~~l~~~~~~~~~~~--~~~~~~~  158 (918)
T PLN02305         81 GIDVRAVITIRKKIKEKITEKFEDQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSVESSVRGWLPKPSNDP--HIVEYAA  158 (918)
T ss_pred             CCeEEEEEEEEeecccchhhcccchhhHHHHhhCCeEEEEEEeccccCCCCCcccccchhhccccCCCCCC--CceEEEE
Confidence            47999999999999874        3 6899999 99999999999999984   4689999998643213  6789999


Q ss_pred             EEeccCCCCCeEEEEEEeCCCCceeeeeEEEeeCCCCcEEEeecccccCCCCCccceEEeeccccccCCCChHhHHHHHH
Q 008591          134 ELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAE  213 (560)
Q Consensus       134 ~f~~~~~fG~pgai~v~n~h~~e~fl~~i~l~~~p~g~i~FpCnsWV~~~~~~~~~Riff~nk~yLP~~tp~~L~~~Re~  213 (560)
                      +|+||++||+||||+|+|.|++||||++|+|+++|+|+|||+||||||+.++|+.+||||+||+|||++||++|++|||+
T Consensus       159 ~f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~~Re~  238 (918)
T PLN02305        159 DFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDLRRE  238 (918)
T ss_pred             EEeeccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCcccccCeEEeccccCCCCCCccc-cccCccCCCCCCCCCcccCCCCCCCCCCCCCCCccC---CCccCC
Q 008591          214 ELNNLQGDGQGERKRHERIYDYDVYNDLALPEIK-ELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSV---SIYVPR  289 (560)
Q Consensus       214 EL~~lRG~g~gerk~~dRiYdydvYnDlG~Pd~~-~~~RPvLGg~~~PYPRR~RTGR~~~~~dp~~esr~~---~~yvPr  289 (560)
                      ||++|||||+||||+||||||||||||||+||++ +++||||||++||||||||||||||++||.+|+|..   .|||||
T Consensus       239 eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~Dp~~Esr~~~~~~~YvPr  318 (918)
T PLN02305        239 DLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVYVPR  318 (918)
T ss_pred             HHHHhcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCCCCCCCcCcCCCCCCCCCCcccccccCCCCcCCCC
Confidence            9999999999999999999999999999999999 999999999669999999999999999999999954   479999


Q ss_pred             CCccccccccccccchhhhhhhhhhhHHHHHhhcCCCCCCCHHHHHHHhhcCCCCCCCCCCcchhhh-hhH-HHHHHhhc
Q 008591          290 DEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQK-ILP-ILFKTVSN  367 (560)
Q Consensus       290 DE~Fs~~K~~dF~~~~lk~~~~~~ip~l~~~~~~~~~~f~sf~di~~Ly~~g~~l~~~~~~~~~~~~-~~p-~~~~~i~~  367 (560)
                      ||+|+++|++||.++++|+++|+++|.|+++++.++.+|+||+||++||++|++|| ... .+.+++ .+| +++++|.+
T Consensus       319 DE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~-~~~-~~~~~~~p~~~~~~~~i~~  396 (918)
T PLN02305        319 DETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLK-TEE-PKDIGLNPFLGNFMKQVLS  396 (918)
T ss_pred             CCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCC-chh-hhhhhcCCchHHHHHHhhh
Confidence            99999999999999999999999999999999989999999999999999999998 310 023333 233 89999987


Q ss_pred             cCccccccCCccccccccccccccHHHHHHHhhCCCccceeecccCCCCCCCCCCccCCCCCCCCHHHHHHHhCCcccHH
Q 008591          368 TGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVN  447 (560)
Q Consensus       368 ~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~Ldp~~yG~~~s~It~e~ie~~l~g~~tl~  447 (560)
                      +++.+||||+|+||++|+++|++|+|||||||||+||++|+||++||++|+|||++||+|+|+||+|||+..|+| +||+
T Consensus       397 ~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~~L~G-~Tle  475 (918)
T PLN02305        397 VSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEG-MTVE  475 (918)
T ss_pred             cccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHHHhhcCC-CcHH
Confidence            789999999999999999999999999999999999999999999999999999999999999999999999998 9999


Q ss_pred             HHHhCCcEEEEecccccCccccccccCCCceeeeeeeeEeeCCCCceeeEEEEecCCCCCCCCCCceEEeCCCCCCCChH
Q 008591          448 EAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWL  527 (560)
Q Consensus       448 eal~~grLFilDy~d~~lp~l~~in~~~g~~~yAprtLffl~~dG~L~PlAIqL~~p~~~~~p~~~~VftP~d~~~~~~~  527 (560)
                      |||++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++++++.+++||||++++++.|.
T Consensus       476 eAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~~d~~~~w~  555 (918)
T PLN02305        476 KAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTHWI  555 (918)
T ss_pred             HHHHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceeeCCCCCCCCchH
Confidence            99999999999999999999999999999999999999999999999999999999998888888999999877788999


Q ss_pred             HHHHHHHHHhcccchhHHHHHhhhhccccccC
Q 008591          528 WTLAKAHFLVHDTGYHQLISHCQPETQCNASN  559 (560)
Q Consensus       528 W~LAKa~v~~aD~~~HQlisH~l~THlv~E~~  559 (560)
                      |+||||||++||++|||+|+|||+||||||||
T Consensus       556 W~LAK~~V~~aD~~~HQlisHlLrTHlv~Epf  587 (918)
T PLN02305        556 WKLAKAHVCSNDAGVHQLVNHWLRTHACMEPY  587 (918)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHhhHHHHHHHH
Confidence            99999999999999999999999999999997

>PLN02264 lipoxygenase Back     alignment and domain information
>PLN02337 lipoxygenase Back     alignment and domain information
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1 Back     alignment and domain information
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins Back     alignment and domain information
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain Back     alignment and domain information
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1 Back     alignment and domain information
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain Back     alignment and domain information
>cd02899 PLAT_SR Scavenger receptor protein Back     alignment and domain information
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase Back     alignment and domain information
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function Back     alignment and domain information
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins Back     alignment and domain information
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family Back     alignment and domain information
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query560
2iuj_A 853 Crystal Structure Of Soybean Lipoxygenase-B Length 8e-90
1rov_A 857 Lipoxygenase-3 Treated With Cumene Hydroperoxide Le 3e-88
1ik3_A 857 Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydrope 4e-88
2iuk_A 864 Crystal Structure Of Soybean Lipoxygenase-D Length 6e-83
3bne_A 839 Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 4e-80
3bnd_A 839 Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 5e-80
3bnb_A 839 Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 5e-80
3bnc_A 839 Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 6e-80
1fgm_A 839 Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Leng 6e-80
1fgt_A 839 Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Leng 6e-80
3pzw_A 839 Soybean Lipoxygenase-1 - Re-Refinement Length = 839 6e-80
1fgr_A 839 Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Leng 7e-80
1y4k_A 839 Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Leng 7e-80
2sbl_B 839 The Three-Dimensional Structure Of An Arachidonic A 7e-80
1fgq_A 839 Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Leng 2e-79
1fgo_A 839 Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Leng 3e-79
3vf1_A 698 Structure Of A Calcium-Dependent 11r-Lipoxygenase S 5e-08
3v98_A 691 S663d Stable-5-Lox Length = 691 5e-07
3dy5_A 1066 Allene Oxide Synthase 8r-Lipoxygenase From Plexaura 6e-07
3o8y_A 691 Stable-5-Lipoxygenase Length = 691 6e-07
3v92_B 691 S663a Stable-5-Lox Length = 691 6e-07
3fg4_A 696 Crystal Structure Of Delta413-417:gs I805a Lox Leng 8e-07
3fg1_A 696 Crystal Structure Of Delta413-417:gs Lox Length = 6 8e-07
2fnq_A 699 Insights From The X-Ray Crystal Structure Of Coral 8e-07
3fg3_A 696 Crystal Structure Of Delta413-417:gs I805w Lox Leng 9e-07
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B Length = 853 Back     alignment and structure 
Iteration: 1

 Score =  327 bits (839), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 182/426 (42%), Positives = 256/426 (60%), Gaps = 15/426 (3%)
Query: 131 YKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIVDKQK 189
           Y A+    + FG  GA  +++    E YL+ ++L+ +PN G ++  C+SW+      K  
Sbjct: 95  YDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPNHGTIHFICNSWVYNSKHYKTD 154
Query: 190 RIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKE- 248
           RIFF N +YLPS+TP  L + R EEL N++GDG GERK  +RIYDYDVYNDL  P+  E 
Sbjct: 155 RIFFANNTYLPSETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDKGEK 214
Query: 249 LARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYS 308
            ARPVLGG   PYPRR RTGR K+  DP SE     +Y+PRDEAF  +K   F A  + S
Sbjct: 215 YARPVLGGSALPYPRRGRTGRGKTRKDPNSEKPGDFVYLPRDEAFGHLKSSDFLAYGIKS 274
Query: 309 GLHALVPFLEAILIDK--DLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVS 366
               ++P L          L F + +++ K++  G+ LP           I+  LF+T  
Sbjct: 275 VAQDVLPVLTDAFDGNLLSLDFDNFAEVRKLYEGGVTLPTNFLSNITPIPIIKELFRT-- 332
Query: 367 NTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGP 426
             G++  ++  P+ +  DK  W+ +EEF RET+AGLNP  IK++ + PL S LD + YG 
Sbjct: 333 -DGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGD 391
Query: 427 PESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGST--LYGSRA 484
               IT E +E  +GGL TV +AI+ KKLFI+D+HD L+PY   LR+I  +T   Y +R 
Sbjct: 392 HTCIITKEHLEPNLGGL-TVEQAIQNKKLFILDHHDYLIPY---LRKINANTTKTYATRT 447
Query: 485 LFFLNPDGTLRPLAIELTRPPLDGKPQW--KQVFTPSRHSTDSWLWTLAKAHFLVHDTGY 542
           +FFL  DGTL PLAIEL++P   G+      +V+ PS    ++++W LAKA+ +V+D  Y
Sbjct: 448 IFFLKNDGTLTPLAIELSKPHPQGEEYGPVSEVYVPSSEGVEAYIWLLAKAYVVVNDACY 507
Query: 543 HQLISH 548
           HQ+ISH
Sbjct: 508 HQIISH 513
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide Length = 857 Back     alignment and structure
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy- 9(Z),11(E)-Octadecadienoic Acid Length = 857 Back     alignment and structure
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D Length = 864 Back     alignment and structure
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 Back     alignment and structure
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 Back     alignment and structure
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 Back     alignment and structure
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 Back     alignment and structure
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Length = 839 Back     alignment and structure
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Length = 839 Back     alignment and structure
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement Length = 839 Back     alignment and structure
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Length = 839 Back     alignment and structure
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Length = 839 Back     alignment and structure
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15- Lipoxygenase Length = 839 Back     alignment and structure
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Length = 839 Back     alignment and structure
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Length = 839 Back     alignment and structure
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests A Mechanism For Ca-Regulation Length = 698 Back     alignment and structure
>pdb|3V98|A Chain A, S663d Stable-5-Lox Length = 691 Back     alignment and structure
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura Homomalla Length = 1066 Back     alignment and structure
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase Length = 691 Back     alignment and structure
>pdb|3V92|B Chain B, S663a Stable-5-Lox Length = 691 Back     alignment and structure
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox Length = 696 Back     alignment and structure
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox Length = 696 Back     alignment and structure
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r- Lipoxygenase: Calcium Activation Via A C2-Like Domain And A Structural Basis Of Product Chirality Length = 699 Back     alignment and structure
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox Length = 696 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query560
1f8n_A 839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 1e-161
2iuk_A 864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 1e-154
2iuj_A 853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 1e-147
3dy5_A 1066 Allene oxide synthase-lipoxygenase protein; fusion 1e-46
3rde_A 573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 1e-46
3v98_A 691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 9e-42
1lox_A 662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 2e-41
3fg1_A 696 Allene oxide synthase-lipoxygenase protein; arichi 5e-40
3d3l_A 541 Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir 4e-37
3vf1_A 698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 3e-35
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Length = 839 Back     alignment and structure
 Score =  479 bits (1233), Expect = e-161
 Identities = 175/505 (34%), Positives = 270/505 (53%), Gaps = 25/505 (4%)

Query: 63  LTEKSTKVKAVITVKP---IIPDPLA-----LSSLVG-ALGLELVSAELDPKTGEEKPTI 113
           +     K+K  + + P   +  +P       L++ +G ++ L+L+SA      G+ K   
Sbjct: 1   MFSAGHKIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGK 60

Query: 114 KGLALGV---LGKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN- 169
                G+   L     G   +    +   S G  GA  +++    E +L+ + L+ + N 
Sbjct: 61  DTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQ 120

Query: 170 GPVNLTCDSWIQPKIVDKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRH 229
           G +   C+SW+    + K  RIFF N +Y+PS+TP  L   R EEL +L+G+G GERK +
Sbjct: 121 GTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEY 180

Query: 230 ERIYDYDVYNDLALPEIK-ELARPVLGG-EEHPYPRRCRTGRPKSFADPASESRSVSIYV 287
           +RIYDYDVYNDL  P+   +LARPVLGG    PYPRR RTGR  +  DP +E +    YV
Sbjct: 181 DRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYV 240

Query: 288 PRDEAFADIKLGQFSASSLYSGLHALVPFLEAILIDKD--LGFSSLSDIDKVFNEGIELP 345
           PRDE    +K          S    + P  E+    K   + F S  D+  ++  GI+LP
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP 300

Query: 346 PELKDQPLWQKILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPY 405
            ++         LP++ +     G+ + +F  P  V   +  W+ +EEF RE +AG+NP 
Sbjct: 301 RDVIS---TIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPC 357

Query: 406 SIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALL 465
            I+ L + P KS LDP IYG   S IT + ++ +     T++EA+  ++LF++DYHD  +
Sbjct: 358 VIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLDG---YTMDEALGSRRLFMLDYHDIFM 414

Query: 466 PYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDG--KPQWKQVFTPSRHST 523
           PYV ++ Q+  +  Y +R + FL  DGTL+P+AIEL+ P   G       QV  P++   
Sbjct: 415 PYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGV 474

Query: 524 DSWLWTLAKAHFLVHDTGYHQLISH 548
           +S +W LAKA+ +V+D+ YHQL+SH
Sbjct: 475 ESTIWLLAKAYVIVNDSCYHQLMSH 499
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Length = 864 Back     alignment and structure
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Length = 853 Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Length = 573 Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691 Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Length = 662 Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696 Back     alignment and structure
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Length = 541 Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query560
2iuk_A 864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 100.0
1f8n_A 839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 100.0
2iuj_A 853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 100.0
1lox_A 662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 100.0
3v98_A 691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 100.0
3fg1_A 696 Allene oxide synthase-lipoxygenase protein; arichi 100.0
3vf1_A 698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 100.0
3dy5_A 1066 Allene oxide synthase-lipoxygenase protein; fusion 100.0
3rde_A 573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 100.0
3d3l_A 541 Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir 100.0
2wxu_A370 Phospholipase C; cytolysis, hydrolase, hemolysis, 98.18
1olp_A370 Alpha-toxin; zinc phospholipase C, GAS gangrene de 98.16
3cwz_B384 RAB6IP1, RAB6-interacting protein 1; RAB small GTP 96.67
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Back     alignment and structure
Probab=100.00  E-value=8.7e-150  Score=1260.51  Aligned_cols=483  Identities=37%  Similarity=0.668  Sum_probs=449.4

Q ss_pred             cceeEEEEEEEeeccCCc------------------------------c-ccccccc-cEEEEEEecccCCCCCCC----
Q 008591           66 KSTKVKAVITVKPIIPDP------------------------------L-ALSSLVG-ALGLELVSAELDPKTGEE----  109 (560)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~------------------------------~-~~~~~~g-~v~lqLvS~~~~~~~g~~----  109 (560)
                      ++.+|||+|+||++++++                              + +++|++| +|+|||||+++||+||++    
T Consensus         7 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqlvs~~~~~~~~~~k~~~   86 (864)
T 2iuk_A            7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNISMQLISATQTDGSGNGKVGK   86 (864)
T ss_dssp             -CCCEEEEEEEEEGGGSCHHHHTTC-----------------------CCSGGGSCSTTEEEEEEEEEEECSSSCEEEEE
T ss_pred             CCCEEEEEEEEEecccccccccccccccccccccccccccccccccchhhhHHHhccCeEEEEEEecccCCCCCCCcCCC
Confidence            346788888888876442                              2 5789999 999999999999999987    


Q ss_pred             ccccccccccCC-CCCCCCceEEEEEEeccCCCCCeEEEEEEeCCCCceeeeeEEEeeCCC-CcEEEeecccccCCCCCc
Q 008591          110 KPTIKGLALGVL-GKDDDGNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIVDK  187 (560)
Q Consensus       110 ~~~~~~~~~~~~-~~~~~~~~~y~~~f~~~~~fG~pgai~v~n~h~~e~fl~~i~l~~~p~-g~i~FpCnsWV~~~~~~~  187 (560)
                      +++|++|+.... ..+  ++++|+|+|.||++||+||||+|+|+|++||||++|+|+++|+ |+|||+||||||+.++|+
T Consensus        87 ~~~~~~~~~~~~~~~~--~~~~~~~~f~~~~~fg~pgA~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv~~~~~~~  164 (864)
T 2iuk_A           87 EVYLEKHLPTLPTLGA--RQDAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYK  164 (864)
T ss_dssp             EEECCEEECSCSSCCT--TCEEEEEEECCCSTTCCEEEEEEEECSSSCEEEEEEEEECCSSSCCEEEEEEEEECBGGGSS
T ss_pred             cccccccccCCCcCCC--CcEEEEEEEEeeccCCCcceEEEEeCCCCceEEEEEEEecCCCCCcEEEecCccccCCCCCC
Confidence            699999995433 333  7899999999999999999999999999999999999999998 899999999999999999


Q ss_pred             cceEEeeccccccCCCChHhHHHHHHHHHhhcCCCCCcccccCeEEeccccCCCCCCccc-cccCccCCC-CCCCCCccc
Q 008591          188 QKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIK-ELARPVLGG-EEHPYPRRC  265 (560)
Q Consensus       188 ~~Riff~nk~yLP~~tp~~L~~~Re~EL~~lRG~g~gerk~~dRiYdydvYnDlG~Pd~~-~~~RPvLGg-~~~PYPRR~  265 (560)
                      .+||||+||+|||++||++|+++||+||++|||||+||||+||||||||||||||+||++ +  |||||| ++|||||||
T Consensus       165 ~~RifF~n~~ylp~~tp~~l~~~R~~el~~lrg~g~g~rk~~driydyd~yndlg~pd~~~~--rpvlggs~~~pyPrR~  242 (864)
T 2iuk_A          165 KNRIFFVNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDP--RPILGGCSIYPYPLRV  242 (864)
T ss_dssp             SCEEEEBSCCCCTTTSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCBGGGTBC--CCCBSSSSSSCCCCEE
T ss_pred             CCceeccCCCcCcccCcHHHHHHHHHHHHHhcCCCCCcccccccchhhhhhhcCCCcccCCC--CcccCCCCCCCCCccc
Confidence            999999999999999999999999999999999999999999999999999999999998 6  999999 999999999


Q ss_pred             CCCCCCCCCCCCCCCccCCCccCCCCccccccccccccchhhhhhhhhhhHHHHHhh--c-CCCCCCCHHHHHHHhhcCC
Q 008591          266 RTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILI--D-KDLGFSSLSDIDKVFNEGI  342 (560)
Q Consensus       266 RTGR~~~~~dp~~esr~~~~yvPrDE~Fs~~K~~dF~~~~lk~~~~~~ip~l~~~~~--~-~~~~f~sf~di~~Ly~~g~  342 (560)
                      ||||+|+++||.+|+|.. +||||||+|++.|++||.++++++++|.++|+|+++++  + +..+|+||+||++||++|+
T Consensus       243 rtgr~~~~~dp~~e~~~~-~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~l~~~~~~~~~~~~~f~sf~di~~ly~~g~  321 (864)
T 2iuk_A          243 RTGRERTRTDPNSEKPGE-VYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGI  321 (864)
T ss_dssp             CCCCCBCSSCTTSBCCCC-CCCCGGGSCCCSSGGGCHHHHHHHHHHTTHHHHHHHHHSSCSSCSSCCSHHHHHTTTSSCE
T ss_pred             cCCCCCCCCCCCcccccc-CCCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccCcCCCCCHHHHHHHHhccc
Confidence            999999999999999965 99999999999999999999999999999999999985  3 6789999999999999999


Q ss_pred             CCCCCCCCcchhhhhhH-HHHHHhhc-cCccccccCCccccccccccccccHHHHHHHhhCCCccceeecccCCCCCCCC
Q 008591          343 ELPPELKDQPLWQKILP-ILFKTVSN-TGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLD  420 (560)
Q Consensus       343 ~l~~~~~~~~~~~~~~p-~~~~~i~~-~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~Ld  420 (560)
                      ++| .    +.+++.+| +++|+|.. .++.+++||+|++|++|+++|++|+|||||+|||+||++|+||++||++|+||
T Consensus       322 ~l~-~----~~~~~~~p~~~~~~~~~~~~e~~lk~p~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ld  396 (864)
T 2iuk_A          322 KLP-T----DILSQISPLPALKEIFRTDGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLD  396 (864)
T ss_dssp             ECC-H----HHHHHHSSCTTTTTTCBCTTSSEEBCCCCSSCSCSSSSSSCHHHHHHHHHHSSSCSCCEECSSSSCCCCSC
T ss_pred             cCc-h----hhhcccCcHHHHHHHhhccccchhcCCCcceecccchhhhchHHHHHHHhcCCCchhhhhhhccCCcccCC
Confidence            998 2    35555556 77777754 45899999999999999999999999999999999999999999999999999


Q ss_pred             CCccCCCCCCCCHHHHHHHhCCcccHHHHHhCCcEEEEecccccCccccccccCCCceeeeeeeeEeeCCCCceeeEEEE
Q 008591          421 PEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIE  500 (560)
Q Consensus       421 p~~yG~~~s~It~e~ie~~l~g~~tl~eal~~grLFilDy~d~~lp~l~~in~~~g~~~yAprtLffl~~dG~L~PlAIq  500 (560)
                      |++||+++|+||++||+..++| +||++||++|||||+||||++|||++++|+++++++|||+||||++++|+|+|||||
T Consensus       397 p~~yg~~~s~it~e~i~~~l~g-~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp~~Lffl~~dG~L~PlAIq  475 (864)
T 2iuk_A          397 PTLYGDQTSTITKEQLEINMGG-VTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIE  475 (864)
T ss_dssp             HHHHCCCCCCCCHHHHGGGTTT-CCHHHHHHTTCEEEEECHHHHGGGHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEE
T ss_pred             hhhcCCcccccCHHHHhhccCC-CcHHHHHhcCCEEEecchhhhccchhhcccCCCceeecceEEEEEcCCCCEeEEEEE
Confidence            9999999999999999999998 999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCCCCCC--CCceEEeCCCCCCCChHHHHHHHHHHhcccchhHHHHHhhhhccccccC
Q 008591          501 LTRPPLDGKP--QWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHCQPETQCNASN  559 (560)
Q Consensus       501 L~~p~~~~~p--~~~~VftP~d~~~~~~~W~LAKa~v~~aD~~~HQlisH~l~THlv~E~~  559 (560)
                      |++|++++++  ++++||||+|+++++|.|+||||||++||++|||+|+||++||+|||||
T Consensus       476 Ls~p~~~~~~~~~~~~VftP~dd~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf  536 (864)
T 2iuk_A          476 LSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPF  536 (864)
T ss_dssp             EEECCSSSSSSCCEEEEECCCSSSSHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHH
T ss_pred             eeCCCCCccccCCCCCeECCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence            9998765543  6789999998777789999999999999999999999999999999986
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Back     alignment and structure
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Back     alignment and structure
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Back     alignment and structure
>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A Back     alignment and structure
>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3 Back     alignment and structure
>3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 560
d3bnea1 690 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal dom 1e-145
d2p0ma1 551 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Ory 3e-46
d3bnea2143 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Gl 2e-30
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 690 Back     information, alignment and structure

class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

 Score =  431 bits (1110), Expect = e-145
 Identities = 141/358 (39%), Positives = 207/358 (57%), Gaps = 16/358 (4%)

Query: 199 LPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEI-KELARPVLGG- 256
           +PS+TP  L   R EEL +L+G+G GERK ++RIYDYDVYNDL  P+  ++LARPVLGG 
Sbjct: 1   VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGS 60

Query: 257 EEHPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPF 316
              PYPRR RTGR  +  DP +E +    YVPRDE    +K          S    + P 
Sbjct: 61  STFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPA 120

Query: 317 LEAILIDKD--LGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILF--KTVSNTGKEV 372
            E+    K   + F S  D+  ++  GI+LP     + +   I+P+    +     G+ +
Sbjct: 121 FESAFDLKSTPIEFHSFQDVHDLYEGGIKLP-----RDVISTIIPLPVIKELYRTDGQHI 175

Query: 373 FRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAIT 432
            +F  P  V   +  W+ +EEF RE +AG+NP  I+ L + P KS LDP IYG   S IT
Sbjct: 176 LKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT 235

Query: 433 TELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDG 492
            + ++ +     T++EA+  ++LF++DYHD  +PYV ++ Q+  +  Y +R + FL  DG
Sbjct: 236 ADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDG 292

Query: 493 TLRPLAIELTRPPLDG--KPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISH 548
           TL+P+AIEL+ P   G       QV  P++   +S +W LAKA+ +V+D+ YHQL+SH
Sbjct: 293 TLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSH 350
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 551 Back     information, alignment and structure
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 143 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query560
d3bnea1 690 Lipoxigenase, C-terminal domain {Soybean (Glycine 100.0
d2p0ma1 551 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 100.0
d3bnea2143 Plant lipoxigenase {Soybean (Glycine max), isozyme 100.0
d2p0ma2111 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 97.93
d1olpa2121 Alpha-toxin, C-terminal domain {Clostridium absonu 97.54
d1ca1a2121 Alpha-toxin, C-terminal domain {Clostridium perfri 97.37
d1rp1a1113 Pancreatic lipase, C-terminal domain {Dog (Canis f 93.4
d1bu8a1114 Pancreatic lipase, C-terminal domain {Rat (Rattus 93.24
d1gpla1112 Pancreatic lipase, C-terminal domain {Guinea pig ( 85.22
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

Probab=100.00  E-value=1.2e-114  Score=961.09  Aligned_cols=353  Identities=40%  Similarity=0.740  Sum_probs=332.4

Q ss_pred             ccCCCChHhHHHHHHHHHhhcCCCCCcccccCeEEeccccCCCCCCccc-cccCccCCC-CCCCCCcccCCCCCCCCCCC
Q 008591          199 LPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIK-ELARPVLGG-EEHPYPRRCRTGRPKSFADP  276 (560)
Q Consensus       199 LP~~tp~~L~~~Re~EL~~lRG~g~gerk~~dRiYdydvYnDlG~Pd~~-~~~RPvLGg-~~~PYPRR~RTGR~~~~~dp  276 (560)
                      ||++||++|+++||+||++|||||+||||+||||||||||||||+||++ +++|||||| ++|||||||||||+||++||
T Consensus         1 lp~~tp~~l~~~r~~el~~lrg~g~g~~~~~driydy~~yndlg~pd~~~~~~rp~lgg~~~~pyprr~rtgr~~~~~dp   80 (690)
T d3bnea1           1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDP   80 (690)
T ss_dssp             CGGGSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTTCGGGCCCCBSSSSSSCCCCEECCCCCBCSSCT
T ss_pred             CCccccHHHHHHHHHHHHHhCCCCCCCCCcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence            8999999999999999999999999999999999999999999999999 999999999 78999999999999999999


Q ss_pred             CCCCccCCCccCCCCccccccccccccchhhhhhhhhhhHHHHHhh--cCCCCCCCHHHHHHHhhcCCCCCCCCCCcchh
Q 008591          277 ASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPFLEAILI--DKDLGFSSLSDIDKVFNEGIELPPELKDQPLW  354 (560)
Q Consensus       277 ~~esr~~~~yvPrDE~Fs~~K~~dF~~~~lk~~~~~~ip~l~~~~~--~~~~~f~sf~di~~Ly~~g~~l~~~~~~~~~~  354 (560)
                      .+|+|...+||||||+|+++|++||.++++|+++|+++|.|+++++  .+.++|+||+||++||++|+++| .    +.+
T Consensus        81 ~~e~r~~~~yvPrde~f~~~k~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~f~~f~~i~~ly~~g~~~~-~----~~~  155 (690)
T d3bnea1          81 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP-R----DVI  155 (690)
T ss_dssp             TSBCCCSSCCCCGGGSCCCSSGGGCHHHHHHHHHHTHHHHHHHHHHTTSSCSSCCSHHHHHGGGTTCEECC-H----HHH
T ss_pred             CcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccCc-h----hhh
Confidence            9999999999999999999999999999999999999999999876  46789999999999999999997 2    344


Q ss_pred             hhhhH-HHHHHhh-ccCccccccCCccccccccccccccHHHHHHHhhCCCccceeecccCCCCCCCCCCccCCCCCCCC
Q 008591          355 QKILP-ILFKTVS-NTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAIT  432 (560)
Q Consensus       355 ~~~~p-~~~~~i~-~~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~Ldp~~yG~~~s~It  432 (560)
                      ++.+| ++++++. .+++.+||||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+|||++||++.++||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~W~~D~eFarQ~LaG~NP~~Irr~~e~P~~~~l~~~~~g~~~s~it  235 (690)
T d3bnea1         156 STIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT  235 (690)
T ss_dssp             HHHTTSTTGGGGCEECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSSTTCCEECCSSSCCCCSCHHHHCCCCCCCC
T ss_pred             hhcccHHHHHHHhhccccceeecCCchhhhccccccccHHHHHHHHhcCCCchheeeccccCCcCCCCHHHhCchhhhhh
Confidence            55555 4565655 456899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCcccHHHHHhCCcEEEEecccccCccccccccCCCceeeeeeeeEeeCCCCceeeEEEEecCCCCCC--CC
Q 008591          433 TELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLDG--KP  510 (560)
Q Consensus       433 ~e~ie~~l~g~~tl~eal~~grLFilDy~d~~lp~l~~in~~~g~~~yAprtLffl~~dG~L~PlAIqL~~p~~~~--~p  510 (560)
                      +++++  ++| +||++||++|||||+||||+++|+++++|...+++.|||+||||++++|+|+||||||++++..+  .+
T Consensus       236 ~~~i~--l~G-~Tl~~Al~~grLFi~Dy~dl~~~~~~~i~~~~~~~~~A~~~Lffl~~dG~L~PiAIqL~~~~~~~~~~~  312 (690)
T d3bnea1         236 ADSLD--LDG-YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSA  312 (690)
T ss_dssp             GGGCC--CTT-CCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEECCCCTTCCCC
T ss_pred             Hhhhc--cCc-cHHHHHHHcCCEEEEechhhhccccccccCcCCceeecchhheeECCCCCcccEEEEecCCCCCcccCC
Confidence            99985  778 99999999999999999999999999999999999999999999999999999999999998654  36


Q ss_pred             CCceEEeCCCCCCCChHHHHHHHHHHhcccchhHHHHHhhhhccccccC
Q 008591          511 QWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHCQPETQCNASN  559 (560)
Q Consensus       511 ~~~~VftP~d~~~~~~~W~LAKa~v~~aD~~~HQlisH~l~THlv~E~~  559 (560)
                      ++++||||+|+++++|.|+||||||++||++|||+|+||++||+|||||
T Consensus       313 ~~~~VftP~d~~~~~~~W~lAK~~v~~aD~~~HqlvsHll~THlv~Epf  361 (690)
T d3bnea1         313 AVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPF  361 (690)
T ss_dssp             CCCEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHH
T ss_pred             CCCceeCCCCCCccchHHHHHHHHHHHhhHHHHHHHHhhhhhhhHHHHH
Confidence            7899999999766789999999999999999999999999999999986
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]} Back     information, alignment and structure
>d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]} Back     information, alignment and structure
>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure
>d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1gpla1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Guinea pig (Cavia porcellus) [TaxId: 10141]} Back     information, alignment and structure