Citrus Sinensis ID: 008597

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560
MESERRLNLKSKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVLRRLGHSSRT
ccccccccccccHHHHHHHHHHHHHHcccccHHHccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccHHHHHHcHHHHHHHHHHHHHcccccEEEccHHHHHHHccccccccccHHHHHHHHHHHHccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
cccHHHHHHcHHHHHHHHHHHHHHHHccccccHcccHHHHHHHcccHHHHHHHHHHHHHHHHHcHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHEEEHHHHHHccccHHHHHHHHHHHHcccccccccEEEEHHcHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHccccccccccccccccccccccccccccHHccccccccccEEEcccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
meserrlnlKSKWIATVASIWIQCCSGATYTFGIYSStlkssqnydqstlDTVSVFKDIGANVGVLSGLLYSFATlnhhhrtrfsflrgpwvVHLTGAILCFAGYFLMWASVVglihsppvpLMCLFMFLAAHsqtffntgnVVTGVmnfgdyggTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIhgtnsaddkkHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSsplgiaikaqredttrlsptfatqrsplvdcpetttstkfsasqdsvayhelpgeesqvkaefddkklkdeedMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQigeslgyptsAINSLVSLWSIWNFLgrfgggyvSDIVLHrmgwerpsFIAITLATMSVGHIVVasgfpgnlyVGSIIVGVCYgcqwslmptityeifgvghmgTIFNTIAIASPVGSYVCSVRIIGYIydnvasgegnscngthCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVLRRLGHSSRT
meserrlnLKSKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTnsaddkkhLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAqredttrlsptfatqrsplvdcPETTTSTKFSASQDSVAYhelpgeesqvkaEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVlrrlghssrt
MESERRLNLKSKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITflfllfllSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVkaefddkklkdeedMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVLRRLGHSSRT
********LKSKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKA****************************************************************MNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVLRRL******
************WIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQRE************************************************************DMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYK*************
********LKSKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVLRRLGHSSRT
*ESERRLNLKSKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQRED*********************************************VKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVLRRLG*****
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
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MESERRLNLKSKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVLRRLGHSSRT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query560 2.2.26 [Sep-21-2011]
Q9P3K8598 Probable transporter MCH1 N/A no 0.385 0.361 0.252 2e-07
Q6CGU8486 Probable transporter MCH1 yes no 0.239 0.275 0.285 7e-06
Q96TW9489 Probable transporter MCH1 N/A no 0.355 0.406 0.215 9e-05
Q4IM48572 Probable transporter MCH1 yes no 0.364 0.356 0.244 0.0003
>sp|Q9P3K8|MCH1_NEUCR Probable transporter MCH1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mch-1 PE=3 SV=1 Back     alignment and function desciption
 Score = 58.2 bits (139), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 41/257 (15%)

Query: 316 PGEESQVKAEFDDKKLKDEEDMN--ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIG 373
           P  +S  + E D+ ++K    +N    + +     W   +     +G G A +NN+  + 
Sbjct: 323 PDNDSDSEEEDDNARIKKTWVLNAETRRFLTDHTMWCFALGFFLMIGPGEAFINNLGTVI 382

Query: 374 ESL--------GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVL---------------- 409
           ++L        G PTSA    VS+  I + L R   G ++D++                 
Sbjct: 383 KTLYPPHLKFVGEPTSAATH-VSIVGITSTLVRLLTGSLTDLLAPSPQARHVQITSSGTL 441

Query: 410 --HRMGWERPSFIAITLATMSVGHIVVASGFPGN----LYVGSIIVGVCYGCQWSLMPTI 463
              R    R SF+     T+SVG   +ASG+  N     +V S +VG  YG  +SL P I
Sbjct: 442 ERKRFSLSRVSFLLFFAVTLSVGLATLASGWIQNHGERFWVASGLVGAGYGAVFSLTPII 501

Query: 464 TYEIFGVGHMGTIFNTIAIASPVGS----YVCSVRIIGYIYDNVASGEGNS----CNGTH 515
              I+GV +  T +  +A+   +G+     V S      +    ++G+G      C G+ 
Sbjct: 502 ITVIWGVENFATNWGIVAMFPALGATFWGLVYSAVYQSGVEKAASNGQGGEEDQFCYGSE 561

Query: 516 CFMLSFLIMASVAFVGC 532
           C+  +F  MA+  +V C
Sbjct: 562 CYASAFWAMAASVWVAC 578
Probable transporter.
Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)
>sp|Q6CGU8|MCH1_YARLI Probable transporter MCH1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=MCH1 PE=3 SV=1 Back     alignment and function description
>sp|Q96TW9|MCH1_HANAN Probable transporter MCH1 OS=Hansenula anomala GN=MCH1 PE=3 SV=1 Back     alignment and function description
>sp|Q4IM48|MCH1_GIBZE Probable transporter MCH1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MCH1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query560
359491754559 PREDICTED: uncharacterized protein LOC10 0.966 0.967 0.658 0.0
297734047612 unnamed protein product [Vitis vinifera] 0.932 0.852 0.669 0.0
255540871551 conserved hypothetical protein [Ricinus 0.980 0.996 0.677 0.0
224133334530 predicted protein [Populus trichocarpa] 0.935 0.988 0.663 0.0
29824365533 unknown protein [Arabidopsis thaliana] g 0.941 0.988 0.629 0.0
15221382533 nodulin-like and major facilitator domai 0.941 0.988 0.627 0.0
356508612557 PREDICTED: uncharacterized protein LOC10 0.978 0.983 0.584 0.0
297839353530 nodulin family protein [Arabidopsis lyra 0.935 0.988 0.619 0.0
356519027557 PREDICTED: uncharacterized protein LOC10 0.978 0.983 0.583 0.0
225456622537 PREDICTED: uncharacterized protein LOC10 0.951 0.992 0.611 0.0
>gi|359491754|ref|XP_002266530.2| PREDICTED: uncharacterized protein LOC100244916 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  728 bits (1880), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/560 (65%), Positives = 433/560 (77%), Gaps = 19/560 (3%)

Query: 9   LKSKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSG 68
           L SKWI TVASIWIQC  G +Y FG+YSS LKSSQ+YDQ+TLDTVSVFKDIGAN GVLSG
Sbjct: 2   LSSKWITTVASIWIQCTCGGSYAFGVYSSVLKSSQSYDQATLDTVSVFKDIGANAGVLSG 61

Query: 69  LLYSFATL-------NHHHRTRFSFLR---GPWVVHLTGAILCFAGYFLMWASVVGLIHS 118
           LLYS   +       + H  +  S+L    GPWVVH+ GAI CFAGYFL+W SV G+IH 
Sbjct: 62  LLYSAVAVHRRRRRRDSHQASSVSYLLSFGGPWVVHVAGAIQCFAGYFLIWLSVTGVIHR 121

Query: 119 PPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDT 178
           P VPLMCLFMF+AAH+QTFFNT NVVT V NF DYGGTIVGIMKGFLGL GA LIQ YD 
Sbjct: 122 PAVPLMCLFMFIAAHAQTFFNTANVVTAVQNFPDYGGTIVGIMKGFLGLSGAVLIQVYDA 181

Query: 179 IWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIII 238
           +++G PS ++L+LALLPTF SLL M LVRI   ++  +KK LN FS VAL +AAYLMI+I
Sbjct: 182 LFEGNPSIFILMLALLPTFISLLLMCLVRIDERDTQGNKKQLNRFSTVALLVAAYLMIVI 241

Query: 239 ILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTF-ATQRSPLVDCPET 297
           ILENIFTFPLWARI T + LL LL+SPLGIA  A ++++   S    +++RSPL+    +
Sbjct: 242 ILENIFTFPLWARIATLILLLLLLASPLGIAANALKDESEISSQGLVSSERSPLLSDNGS 301

Query: 298 TTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLC 357
             S ++S++      H          A+ D   L+DEED+N++Q++ T NFWLLF+AM C
Sbjct: 302 LQSERWSSAAGDPKEHH--------AADEDTPMLQDEEDLNVVQAMRTGNFWLLFIAMAC 353

Query: 358 GMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 417
           GMGSGLAT+NNISQIGESLGY T  IN+LVSLWSIWNFLGRFG GYVSDI+LHR GW RP
Sbjct: 354 GMGSGLATINNISQIGESLGYTTVEINTLVSLWSIWNFLGRFGAGYVSDILLHRRGWARP 413

Query: 418 SFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIF 477
             + ITLATM++GH+++ASGF GNLYVGS+IVGVCYG QWSLMPTIT E+FGVGHMGTIF
Sbjct: 414 LLMVITLATMTIGHVIIASGFAGNLYVGSVIVGVCYGSQWSLMPTITSELFGVGHMGTIF 473

Query: 478 NTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 537
           NTIAIASPVGSY+ SVR+IGYIYD  ASG+ NSC+GTHCFMLSFLI+  V   G LVA  
Sbjct: 474 NTIAIASPVGSYLLSVRVIGYIYDKEASGKQNSCSGTHCFMLSFLIIGCVTLFGSLVASA 533

Query: 538 LFIRTRRFYKQVVLRRLGHS 557
           LF RT+RFYK VVLRRL  S
Sbjct: 534 LFFRTKRFYKLVVLRRLNLS 553

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297734047|emb|CBI15294.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255540871|ref|XP_002511500.1| conserved hypothetical protein [Ricinus communis] gi|223550615|gb|EEF52102.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224133334|ref|XP_002321541.1| predicted protein [Populus trichocarpa] gi|222868537|gb|EEF05668.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|29824365|gb|AAP04143.1| unknown protein [Arabidopsis thaliana] gi|110739083|dbj|BAF01458.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15221382|ref|NP_177616.1| nodulin-like and major facilitator domain-containing protein [Arabidopsis thaliana] gi|5882744|gb|AAD55297.1|AC008263_28 Strong similarity to gb|AF031243 nodule-specific protein (Nlj70) from Lotus japonicus and is a member of the PF|00083 Sugar (and other) transporter family. EST gb|Z37715 comes from this gene [Arabidopsis thaliana] gi|332197510|gb|AEE35631.1| nodulin-like and major facilitator domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356508612|ref|XP_003523049.1| PREDICTED: uncharacterized protein LOC100775628 [Glycine max] Back     alignment and taxonomy information
>gi|297839353|ref|XP_002887558.1| nodulin family protein [Arabidopsis lyrata subsp. lyrata] gi|297333399|gb|EFH63817.1| nodulin family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356519027|ref|XP_003528176.1| PREDICTED: uncharacterized protein LOC100799596 [Glycine max] Back     alignment and taxonomy information
>gi|225456622|ref|XP_002266496.1| PREDICTED: uncharacterized protein LOC100250053 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query560
TAIR|locus:2027284533 AT1G74780 [Arabidopsis thalian 0.530 0.557 0.621 7.9e-181
TAIR|locus:2011241526 AT1G18940 [Arabidopsis thalian 0.514 0.547 0.580 8.9e-169
TAIR|locus:2040809525 AT2G34350 [Arabidopsis thalian 0.389 0.415 0.669 4.8e-157
TAIR|locus:1005716659523 AT2G34355 [Arabidopsis thalian 0.385 0.413 0.657 1.7e-152
TAIR|locus:2056103601 AT2G39210 "AT2G39210" [Arabido 0.383 0.357 0.414 3e-89
TAIR|locus:2174683579 AT5G14120 [Arabidopsis thalian 0.367 0.355 0.385 1.5e-79
TAIR|locus:2078643584 AT3G01930 [Arabidopsis thalian 0.367 0.352 0.366 2e-75
TAIR|locus:2059829546 AT2G16660 [Arabidopsis thalian 0.371 0.380 0.404 5.3e-71
TAIR|locus:2046238577 AT2G28120 [Arabidopsis thalian 0.823 0.798 0.334 2.1e-68
TAIR|locus:2116855567 AT4G34950 [Arabidopsis thalian 0.928 0.917 0.314 3.5e-68
TAIR|locus:2027284 AT1G74780 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 913 (326.5 bits), Expect = 7.9e-181, Sum P(2) = 7.9e-181
 Identities = 189/304 (62%), Positives = 221/304 (72%)

Query:     9 LKSKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSG 68
             L++KW+A  ASIWIQC SGA+YTFGIYS+ LKS+Q+YDQSTLDTVSVFKDIGAN GV SG
Sbjct:     4 LRTKWVAMTASIWIQCASGASYTFGIYSAVLKSTQSYDQSTLDTVSVFKDIGANAGVFSG 63

Query:    69 LLYSFATLNHHHRTRFSFLRG---PWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMC 125
             LLY++AT N   R R   + G   PWVV   GAI CFAGYFL+WASV GLI  PPVPLMC
Sbjct:    64 LLYTYATSNRL-RGRGGGIGGAGGPWVVLAVGAIQCFAGYFLIWASVTGLIRKPPVPLMC 122

Query:   126 LFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPS 185
             LFMFLAA SQTFFNT NVV+ V NF DYGGT VGIMKGFLGL GA LIQ Y+T+  G P+
Sbjct:   123 LFMFLAAQSQTFFNTANVVSAVENFADYGGTAVGIMKGFLGLSGAILIQLYETLCAGDPA 182

Query:   186 TYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFT 245
             +++L+LA+ PT  SLL M LVRI+ T+ ADDKKHLN  SAV+L IAAYLMIIIIL+N F 
Sbjct:   183 SFILLLAVTPTVLSLLVMPLVRIYETSVADDKKHLNGLSAVSLIIAAYLMIIIILKNTFG 242

Query:   246 FPLWARIITXXXXXXXXSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSA 305
                WA I+T        + PL IA +AQR+   +  P      SPL+  P+ TTS   S+
Sbjct:   243 LSSWANIVTLVCLLVMLALPLLIARRAQRDGMEKTVPH---DYSPLISSPKATTSGNQSS 299

Query:   306 SQDS 309
               DS
Sbjct:   300 EGDS 303
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2011241 AT1G18940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040809 AT2G34350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:1005716659 AT2G34355 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056103 AT2G39210 "AT2G39210" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174683 AT5G14120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078643 AT3G01930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059829 AT2G16660 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046238 AT2G28120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116855 AT4G34950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.XV.1235.1
hypothetical protein (518 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query560
pfam06813248 pfam06813, Nodulin-like, Nodulin-like 9e-64
TIGR00890377 TIGR00890, 2A0111, oxalate/formate antiporter fami 6e-10
PTZ00207591 PTZ00207, PTZ00207, hypothetical protein; Provisio 4e-08
pfam07690 346 pfam07690, MFS_1, Major Facilitator Superfamily 6e-05
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 7e-05
cd06174 352 cd06174, MFS, The Major Facilitator Superfamily (M 2e-04
pfam07690346 pfam07690, MFS_1, Major Facilitator Superfamily 0.001
>gnl|CDD|219187 pfam06813, Nodulin-like, Nodulin-like Back     alignment and domain information 
 Score =  208 bits (532), Expect = 9e-64
 Identities = 91/262 (34%), Positives = 133/262 (50%), Gaps = 17/262 (6%)

Query: 12  KWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLY 71
           +W+  VA+IWIQ  +GA Y F +YSS LKSS  Y Q  L+ + V KD+G N G LSGL  
Sbjct: 1   RWLGLVAAIWIQSFAGANYDFSLYSSALKSSLGYSQVQLNLLGVAKDLGKNFGWLSGLAA 60

Query: 72  SFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLA 131
            +                PWVV L GA + F GY + W +V G I   P  L+CL + LA
Sbjct: 61  EYLP--------------PWVVLLVGAAMGFVGYGVQWLAVTGKIPGLPYWLLCLAICLA 106

Query: 132 AHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLIL 191
            +S  +FNT ++VT + NF +  G ++GI+KG+ GL  A   Q Y  I+    S+ LL+ 
Sbjct: 107 GNSICWFNTASLVTCIRNFPESRGVVLGILKGYAGLSAAIYTQLYTAIFGNDASSLLLLN 166

Query: 192 ALLPTFASLLFMSLVRIHG---TNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPL 248
           AL+P   SL+ +  +R           +      F+ +++ +A YL+ + IL   F    
Sbjct: 167 ALVPLVVSLVALYFIRPCPGKVGEQRSESVVFLVFNVLSVALAVYLVAMSILSKSFDLSS 226

Query: 249 WARIITFLFLLFLLSSPLGIAI 270
                    ++ LL  PL + I
Sbjct: 227 AEYYALGAIMVLLLLVPLAVPI 248

This family represents a conserved region within plant nodulin-like proteins. Length = 248
>gnl|CDD|233171 TIGR00890, 2A0111, oxalate/formate antiporter family transporter Back     alignment and domain information
>gnl|CDD|140234 PTZ00207, PTZ00207, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 560
PTZ00207591 hypothetical protein; Provisional 100.0
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 100.0
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 100.0
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.96
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.94
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.94
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.93
PRK11663434 regulatory protein UhpC; Provisional 99.92
PLN00028476 nitrate transmembrane transporter; Provisional 99.91
PRK09705393 cynX putative cyanate transporter; Provisional 99.91
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 99.9
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.9
PRK03699394 putative transporter; Provisional 99.89
TIGR00893399 2A0114 d-galactonate transporter. 99.89
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.89
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 99.88
PRK03545390 putative arabinose transporter; Provisional 99.88
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.87
PRK12307426 putative sialic acid transporter; Provisional 99.86
TIGR00891405 2A0112 putative sialic acid transporter. 99.85
TIGR00897402 2A0118 polyol permease family. This family of prot 99.85
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.85
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 99.84
TIGR00896355 CynX cyanate transporter. This family of proteins 99.84
TIGR00895398 2A0115 benzoate transport. 99.82
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.82
PRK05122399 major facilitator superfamily transporter; Provisi 99.82
PRK11646400 multidrug resistance protein MdtH; Provisional 99.82
PRK09528420 lacY galactoside permease; Reviewed 99.81
PRK03633381 putative MFS family transporter protein; Provision 99.81
PRK10091382 MFS transport protein AraJ; Provisional 99.81
PRK10504471 putative transporter; Provisional 99.8
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.8
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.8
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 99.8
PRK03893496 putative sialic acid transporter; Provisional 99.8
PRK10213394 nepI ribonucleoside transporter; Reviewed 99.79
PRK12382392 putative transporter; Provisional 99.79
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.79
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.79
PRK10489417 enterobactin exporter EntS; Provisional 99.79
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.78
TIGR00900365 2A0121 H+ Antiporter protein. 99.78
PRK10642490 proline/glycine betaine transporter; Provisional 99.78
PRK09952438 shikimate transporter; Provisional 99.77
PRK14995495 methyl viologen resistance protein SmvA; Provision 99.77
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.77
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.77
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.77
TIGR00898505 2A0119 cation transport protein. 99.77
PRK09874408 drug efflux system protein MdtG; Provisional 99.76
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.76
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 99.76
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 99.75
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 99.74
PRK15075434 citrate-proton symporter; Provisional 99.73
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.73
PRK10054395 putative transporter; Provisional 99.73
PRK11043401 putative transporter; Provisional 99.72
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.72
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.72
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.71
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.7
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.69
PRK10133438 L-fucose transporter; Provisional 99.68
PRK11010491 ampG muropeptide transporter; Validated 99.68
KOG2532466 consensus Permease of the major facilitator superf 99.68
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.67
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.65
PRK11652394 emrD multidrug resistance protein D; Provisional 99.64
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.63
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.63
TIGR00901356 2A0125 AmpG-related permease. 99.63
PRK11902402 ampG muropeptide transporter; Reviewed 99.62
PRK15011393 sugar efflux transporter B; Provisional 99.61
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.61
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.56
COG0738422 FucP Fucose permease [Carbohydrate transport and m 99.55
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 99.54
PRK11195393 lysophospholipid transporter LplT; Provisional 99.54
COG2807395 CynX Cyanate permease [Inorganic ion transport and 99.53
PRK15403413 multidrug efflux system protein MdtM; Provisional 99.53
PRK09848448 glucuronide transporter; Provisional 99.49
KOG0569485 consensus Permease of the major facilitator superf 99.47
KOG2533495 consensus Permease of the major facilitator superf 99.43
PRK09669444 putative symporter YagG; Provisional 99.43
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.42
KOG2563480 consensus Permease of the major facilitator superf 99.38
PRK09584500 tppB putative tripeptide transporter permease; Rev 99.37
PRK10207489 dipeptide/tripeptide permease B; Provisional 99.32
PRK10429473 melibiose:sodium symporter; Provisional 99.31
PF13347428 MFS_2: MFS/sugar transport protein 99.25
TIGR00805633 oat sodium-independent organic anion transporter. 99.23
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.19
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.19
PRK10091 382 MFS transport protein AraJ; Provisional 99.16
PRK10504 471 putative transporter; Provisional 99.14
KOG3764464 consensus Vesicular amine transporter [Intracellul 99.12
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.12
PRK09584 500 tppB putative tripeptide transporter permease; Rev 99.1
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.08
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.08
PRK10213 394 nepI ribonucleoside transporter; Reviewed 99.08
COG2814 394 AraJ Arabinose efflux permease [Carbohydrate trans 99.07
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.07
PRK11663 434 regulatory protein UhpC; Provisional 99.07
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 99.07
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.06
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.05
PRK10054 395 putative transporter; Provisional 99.05
PRK11462460 putative transporter; Provisional 99.05
TIGR00788468 fbt folate/biopterin transporter. The only functio 99.05
PRK03545 390 putative arabinose transporter; Provisional 99.04
PRK15462493 dipeptide/tripeptide permease D; Provisional 99.04
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 99.03
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 99.02
TIGR00900 365 2A0121 H+ Antiporter protein. 99.01
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 99.01
TIGR00893 399 2A0114 d-galactonate transporter. 99.0
PF06609599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.0
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 98.99
cd06174 352 MFS The Major Facilitator Superfamily (MFS) is a l 98.97
TIGR00891 405 2A0112 putative sialic acid transporter. 98.97
TIGR00712 438 glpT glycerol-3-phosphate transporter. This model 98.95
PRK03699 394 putative transporter; Provisional 98.95
PRK09528 420 lacY galactoside permease; Reviewed 98.95
PRK09874 408 drug efflux system protein MdtG; Provisional 98.94
TIGR00895 398 2A0115 benzoate transport. 98.94
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 98.94
PRK11652 394 emrD multidrug resistance protein D; Provisional 98.93
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 98.92
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 98.91
PRK11551 406 putative 3-hydroxyphenylpropionic transporter MhpT 98.9
PRK11195 393 lysophospholipid transporter LplT; Provisional 98.9
PRK15402 406 multidrug efflux system translocase MdfA; Provisio 98.89
PRK15403 413 multidrug efflux system protein MdtM; Provisional 98.89
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 98.89
PRK14995 495 methyl viologen resistance protein SmvA; Provision 98.89
KOG0254513 consensus Predicted transporter (major facilitator 98.89
PRK11043 401 putative transporter; Provisional 98.87
PRK10473 392 multidrug efflux system protein MdtL; Provisional 98.87
TIGR00892 455 2A0113 monocarboxylate transporter 1. 98.86
TIGR00890 377 2A0111 Oxalate/Formate Antiporter. 98.85
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 98.85
PRK03893 496 putative sialic acid transporter; Provisional 98.85
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 98.84
COG2270438 Permeases of the major facilitator superfamily [Ge 98.84
PRK12307 426 putative sialic acid transporter; Provisional 98.84
PRK10489 417 enterobactin exporter EntS; Provisional 98.84
PLN00028 476 nitrate transmembrane transporter; Provisional 98.82
TIGR00882 396 2A0105 oligosaccharide:H+ symporter. 98.82
PRK12382 392 putative transporter; Provisional 98.81
PRK11646 400 multidrug resistance protein MdtH; Provisional 98.8
PRK15462 493 dipeptide/tripeptide permease D; Provisional 98.79
PRK10207 489 dipeptide/tripeptide permease B; Provisional 98.78
KOG1330493 consensus Sugar transporter/spinster transmembrane 98.78
TIGR00879 481 SP MFS transporter, sugar porter (SP) family. This 98.78
TIGR00897 402 2A0118 polyol permease family. This family of prot 98.78
COG2271 448 UhpC Sugar phosphate permease [Carbohydrate transp 98.76
PRK09705 393 cynX putative cyanate transporter; Provisional 98.74
PRK09556 467 uhpT sugar phosphate antiporter; Reviewed 98.73
PRK15034 462 nitrate/nitrite transport protein NarU; Provisiona 98.73
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 98.72
PRK11273 452 glpT sn-glycerol-3-phosphate transporter; Provisio 98.72
TIGR00903 368 2A0129 major facilitator 4 family protein. This fa 98.67
KOG0255521 consensus Synaptic vesicle transporter SVOP and re 98.67
PRK05122 399 major facilitator superfamily transporter; Provisi 98.64
PRK03633 381 putative MFS family transporter protein; Provision 98.64
PTZ00207 591 hypothetical protein; Provisional 98.63
TIGR00894 465 2A0114euk Na(+)-dependent inorganic phosphate cotr 98.6
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 98.57
TIGR00896 355 CynX cyanate transporter. This family of proteins 98.56
TIGR00880141 2_A_01_02 Multidrug resistance protein. 98.56
TIGR00899 375 2A0120 sugar efflux transporter. This family of pr 98.53
PRK10077 479 xylE D-xylose transporter XylE; Provisional 98.52
TIGR00898 505 2A0119 cation transport protein. 98.49
TIGR00902 382 2A0127 phenyl proprionate permease family protein. 98.49
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.47
PRK11128 382 putative 3-phenylpropionic acid transporter; Provi 98.47
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 98.41
TIGR00805 633 oat sodium-independent organic anion transporter. 98.41
PRK11010 491 ampG muropeptide transporter; Validated 98.39
COG2211467 MelB Na+/melibiose symporter and related transport 98.39
PRK10642 490 proline/glycine betaine transporter; Provisional 98.38
PRK15011 393 sugar efflux transporter B; Provisional 98.33
TIGR00885 410 fucP L-fucose:H+ symporter permease. This family d 98.31
PRK09952 438 shikimate transporter; Provisional 98.29
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 98.28
TIGR00887 502 2A0109 phosphate:H+ symporter. This model represen 98.25
PRK10406 432 alpha-ketoglutarate transporter; Provisional 98.23
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 98.23
KOG3764 464 consensus Vesicular amine transporter [Intracellul 98.23
PRK10133 438 L-fucose transporter; Provisional 98.2
PRK11902 402 ampG muropeptide transporter; Reviewed 98.19
TIGR00901 356 2A0125 AmpG-related permease. 98.17
KOG2533 495 consensus Permease of the major facilitator superf 98.1
TIGR00792 437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 98.1
COG3104 498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 98.06
PRK15075 434 citrate-proton symporter; Provisional 98.05
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 98.04
KOG1330 493 consensus Sugar transporter/spinster transmembrane 98.03
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 97.99
TIGR00883 394 2A0106 metabolite-proton symporter. This model rep 97.97
KOG0255 521 consensus Synaptic vesicle transporter SVOP and re 97.95
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 97.93
KOG2532 466 consensus Permease of the major facilitator superf 97.87
COG2223 417 NarK Nitrate/nitrite transporter [Inorganic ion tr 97.8
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 97.79
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 97.78
KOG0254 513 consensus Predicted transporter (major facilitator 97.77
TIGR00889418 2A0110 nucleoside transporter. This family of prot 97.72
KOG2504 509 consensus Monocarboxylate transporter [Carbohydrat 97.7
COG2807 395 CynX Cyanate permease [Inorganic ion transport and 97.64
TIGR00880141 2_A_01_02 Multidrug resistance protein. 97.64
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 97.6
TIGR02718 390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 97.59
PRK09669 444 putative symporter YagG; Provisional 97.59
PF03825 400 Nuc_H_symport: Nucleoside H+ symporter 97.56
PF01306 412 LacY_symp: LacY proton/sugar symporter; InterPro: 97.55
KOG2615451 consensus Permease of the major facilitator superf 97.52
PRK09848 448 glucuronide transporter; Provisional 97.5
TIGR00788 468 fbt folate/biopterin transporter. The only functio 97.43
KOG2615 451 consensus Permease of the major facilitator superf 97.32
PF13347 428 MFS_2: MFS/sugar transport protein 97.31
PRK10429 473 melibiose:sodium symporter; Provisional 97.28
KOG3626 735 consensus Organic anion transporter [Secondary met 97.07
TIGR01272310 gluP glucose/galactose transporter. Disruption of 96.97
PF00083 451 Sugar_tr: Sugar (and other) transporter; InterPro: 96.93
KOG2325488 consensus Predicted transporter/transmembrane prot 96.92
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 96.81
PRK11462 460 putative transporter; Provisional 96.81
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 96.66
COG2211 467 MelB Na+/melibiose symporter and related transport 96.62
KOG2816463 consensus Predicted transporter ADD1 (major facili 96.57
PF03209 403 PUCC: PUCC protein; InterPro: IPR004896 This prote 96.41
KOG0569 485 consensus Permease of the major facilitator superf 96.29
KOG0252 538 consensus Inorganic phosphate transporter [Inorgan 96.24
KOG3098461 consensus Uncharacterized conserved protein [Funct 95.94
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 95.91
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 95.72
COG0477 338 ProP Permeases of the major facilitator superfamil 95.63
PF03092 433 BT1: BT1 family; InterPro: IPR004324 Members of th 95.33
COG2270438 Permeases of the major facilitator superfamily [Ge 95.1
COG0738 422 FucP Fucose permease [Carbohydrate transport and m 94.93
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 94.9
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 94.38
KOG3098461 consensus Uncharacterized conserved protein [Funct 93.86
PF00854 372 PTR2: POT family; InterPro: IPR000109 This entry r 93.77
PF1283277 MFS_1_like: MFS_1 like family 93.7
KOG0253 528 consensus Synaptic vesicle transporter SV2 (major 93.69
PF05631 354 DUF791: Protein of unknown function (DUF791); Inte 93.66
PRK03612 521 spermidine synthase; Provisional 92.45
KOG2325 488 consensus Predicted transporter/transmembrane prot 91.79
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 90.92
KOG2816 463 consensus Predicted transporter ADD1 (major facili 89.75
PF03137 539 OATP: Organic Anion Transporter Polypeptide (OATP) 86.56
KOG3762618 consensus Predicted transporter [General function 86.02
COG0477338 ProP Permeases of the major facilitator superfamil 85.9
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 85.82
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 84.78
PF01733309 Nucleoside_tran: Nucleoside transporter; InterPro: 82.07
KOG2563 480 consensus Permease of the major facilitator superf 81.46
KOG4686 459 consensus Predicted sugar transporter [Carbohydrat 80.55
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.8e-76  Score=654.41  Aligned_cols=510  Identities=16%  Similarity=0.256  Sum_probs=427.4

Q ss_pred             chhHHHHHHHHHHHHhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhhhhhHHHHHhhccccccccccccccCC
Q 008597           10 KSKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRG   89 (560)
Q Consensus        10 ~~rw~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~~~~~G~~~d~~g~~~~~~~~~~~~~G   89 (560)
                      .+||.++++++++++++|+.|.|++|++++++++|+||+|+++++..+...+.+.+++|+++||+|              
T Consensus        24 ~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G--------------   89 (591)
T PTZ00207         24 PRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLG--------------   89 (591)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------------
Confidence            689999999999999999999999999999999999999999887665555556778999999987              


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCCCcceeeehhhhhhhhH
Q 008597           90 PWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGG  169 (560)
Q Consensus        90 p~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~a~Gi~~~~~GLsa  169 (560)
                      ||+++++|++++++|++++|+++++.+. .++|.++++.++.|+|+++.++++++++++|||++||+++|+.+++.|+|+
T Consensus        90 ~R~vllig~ll~~iG~ll~ala~~~~i~-~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGs  168 (591)
T PTZ00207         90 PRPIFVLSMTVFCLGTLLFALTFQEVIE-GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGS  168 (591)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhccccc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999888774 468899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCC---------Ccccc-----------------chhhh
Q 008597          170 AALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNS---------ADDKK-----------------HLNAF  223 (560)
Q Consensus       170 ~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~---------~~~~~-----------------~~~~~  223 (560)
                      +++++++..++.+|.+.+++++++.+..+++++..++|.+|++.         ++|++                 +|..+
T Consensus       169 aI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~  248 (591)
T PTZ00207        169 AILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYG  248 (591)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhH
Confidence            99999999999999999999999999999999999999998653         12222                 34445


Q ss_pred             hHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHH-HHhhcc-cccccccccccccCCCCCcccCCCCCCCCCCCCcCC
Q 008597          224 SAVALTIAAYLMIIIILENIFTFPLWARIITFLFLL-FLLSSP-LGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTST  301 (560)
Q Consensus       224 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~ll~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (560)
                      ..+.+++++|+++.++++++++++++.+..++++++ ++++.| +.+|.+.  .+.++.++    +.++     +.  .+
T Consensus       249 ~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~--~~~~~~~~----~~~~-----~~--~~  315 (591)
T PTZ00207        249 FVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTT--FDGKRPHD----DSDG-----KA--KE  315 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHH--hccCCcCC----Cccc-----cc--cc
Confidence            678888999999999999999999999999888777 777778 5555543  22111110    0000     00  00


Q ss_pred             ccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHc-CCC-
Q 008597          302 KFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL-GYP-  379 (560)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~l-G~~-  379 (560)
                      +.  +.+++.  +.+ +++..+++.+... |+.++ |++|.+++.|||++|++++|+.|+|++++||++||++++ |++ 
T Consensus       316 ~~--~~~~~~--~~~-~~~~~~~~~~~~~-P~~~~-t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~  388 (591)
T PTZ00207        316 HV--EAGEEV--SAA-EDKVVETDVDYIA-PQFQE-TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAP  388 (591)
T ss_pred             cc--cccccc--ccc-ccccccccccCCC-CCCcc-hHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCC
Confidence            00  000000  000 0000011111122 34444 999999999999999999999999999999999999999 873 


Q ss_pred             CcchhH-HHHHHHHhhhhhccccccchhhhhhhcC----CCchHHHHHHHHHHHHHHHHHhhcCc-chHHHHHHHHHhhh
Q 008597          380 TSAINS-LVSLWSIWNFLGRFGGGYVSDIVLHRMG----WERPSFIAITLATMSVGHIVVASGFP-GNLYVGSIIVGVCY  453 (560)
Q Consensus       380 ~~~aa~-lvSl~si~n~~GRl~~G~lsD~~~~~~~----~~R~~~l~~~~~l~~~~~lll~~~~~-~~l~~~~~l~G~~~  453 (560)
                      +.+..+ +||++|++|++||+++|+++ .+.+|++    +||+..+.+... +.+++++++...| ..++++++++|+||
T Consensus       389 ~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~  466 (591)
T PTZ00207        389 DDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFAN  466 (591)
T ss_pred             CccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHh
Confidence            332234 89999999999999999998 6666665    899998888877 7888877776667 78999999999999


Q ss_pred             hccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCC-CCcccCccccHHHHHHHHHHHHHHH
Q 008597          454 GCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGE-GNSCNGTHCFMLSFLIMASVAFVGC  532 (560)
Q Consensus       454 G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~-~~~C~G~~cy~~~f~i~~~l~~la~  532 (560)
                      |.+|++.|++++|+|| ||+|++|+++.++.++|++++|..++|++||++++|+ +.+|.|++||+.+|++++++|++++
T Consensus       467 G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~  545 (591)
T PTZ00207        467 GFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAF  545 (591)
T ss_pred             hHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHH
Confidence            9999999999999999 9999999999999999999999999999999999876 5599999999999999999999999


Q ss_pred             HHHHHHHhhhhhhhHHHHHHhhcCC
Q 008597          533 LVAFLLFIRTRRFYKQVVLRRLGHS  557 (560)
Q Consensus       533 vl~l~l~~r~r~~~~~~~~~~~~~~  557 (560)
                      ++++++++|+||+|++.++||+|..
T Consensus       546 ~~s~~l~~R~r~~y~~~~~~~~~~~  570 (591)
T PTZ00207        546 ITSTYVHLQYRRLCLKALEERRRIR  570 (591)
T ss_pred             HHHhheeeehHHHHHHHHHHHHHHH
Confidence            9999999999999999999998753

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query560
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.94
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 99.92
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.82
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 99.78
2cfq_A417 Lactose permease; transport, transport mechanism, 99.76
2xut_A524 Proton/peptide symporter family protein; transport 99.63
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 99.63
4aps_A 491 DI-OR tripeptide H+ symporter; transport protein, 99.21
1pw4_A 451 Glycerol-3-phosphate transporter; transmembrane, i 99.15
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 99.02
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 98.97
2xut_A 524 Proton/peptide symporter family protein; transport 98.97
2cfq_A 417 Lactose permease; transport, transport mechanism, 98.38
4gc0_A 491 D-xylose-proton symporter; MFS, transport protein; 98.22
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
Probab=99.94  E-value=2.4e-25  Score=235.77  Aligned_cols=403  Identities=15%  Similarity=0.133  Sum_probs=271.8

Q ss_pred             hhchhHHHHHHHHHHHHhcC-cccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhcccccccccccc
Q 008597            8 NLKSKWIATVASIWIQCCSG-ATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFS   85 (560)
Q Consensus         8 ~~~~rw~~l~~~~~i~~~~G-~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~   85 (560)
                      ..+.+|..+....+.....+ ..+.++.+.+.+.+++ +|.+|...+..+..++..+ .++.|.+.||+|          
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g----------   90 (451)
T 1pw4_A           22 YRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQG-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSN----------   90 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHTTSST-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSC----------
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcC----------
Confidence            34556776666666654444 4577888889999999 9999999888888888876 788999999986          


Q ss_pred             ccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhh
Q 008597           86 FLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGF  164 (560)
Q Consensus        86 ~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~  164 (560)
                          +|.++.+|.++..+|.++....... .+  +++.+...-++.|.|.+..+.+......+++| ++||.+.|+...+
T Consensus        91 ----~r~~l~~~~~~~~~~~~~~~~~~~~-~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~  163 (451)
T 1pw4_A           91 ----PRVFLPAGLILAAAVMLFMGFVPWA-TS--SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCA  163 (451)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHCHHH-HS--SSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHH
T ss_pred             ----chHHHHHHHHHHHHHHHHHHhhhhc-cc--cHHHHHHHHHHHHHHhhhccchHHHHHHHHCCchhhhHHHHHHHHH
Confidence                8899999999999999886441110 22  24566667788899999999999999999998 6799999999999


Q ss_pred             hhhhHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhccc
Q 008597          165 LGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIF  244 (560)
Q Consensus       165 ~GLsa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  244 (560)
                      .++|..+-..+...+.                                                             +..
T Consensus       164 ~~~g~~~g~~~~~~l~-------------------------------------------------------------~~~  182 (451)
T 1pw4_A          164 HNVGGGIPPLLFLLGM-------------------------------------------------------------AWF  182 (451)
T ss_dssp             HHHHHTSHHHHHHHHH-------------------------------------------------------------HHT
T ss_pred             HHHHHHHHHHHHHHHH-------------------------------------------------------------HHh
Confidence            9988877654333221                                                             000


Q ss_pred             c-cchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccc
Q 008597          245 T-FPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVK  323 (560)
Q Consensus       245 ~-~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (560)
                      + ....+.+.....++..+..-.  ..+    +..+..+      .   + ++++..     +..+++.   +.+     
T Consensus       183 g~w~~~f~~~~~~~~~~~~~~~~--~~~----~~~~~~~------~---~-~~~~~~-----~~~~~~~---~~~-----  233 (451)
T 1pw4_A          183 NDWHAALYMPAFCAILVALFAFA--MMR----DTPQSCG------L---P-PIEEYK-----NDYPDDY---NEK-----  233 (451)
T ss_dssp             CCSTTCTHHHHHHHHHHHHHHHH--HCC----CSSTTTC------C---C-SCTTTC-----CC----------------
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHh--hcc----CCHhhcC------C---C-Chhhhc-----ccccccc---hhh-----
Confidence            1 111111111111111111000  011    0000000      0   0 000000     0000000   000     


Q ss_pred             cccccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccc
Q 008597          324 AEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGG  402 (560)
Q Consensus       324 ~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G  402 (560)
                          ++++....+...++.+|++.+|.+.+..++.......+..+.+.+.++ +|.++.+++.+.++.++.+.+|++++|
T Consensus       234 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g  309 (451)
T 1pw4_A          234 ----AEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCG  309 (451)
T ss_dssp             ---------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----hhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence                000011112235788999999999988888777666777888888887 699988889999999999999999999


Q ss_pred             cchhhh--hhhcCCCchHHHHHHHHHHH-HHHHHHhhc---CcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhh
Q 008597          403 YVSDIV--LHRMGWERPSFIAITLATMS-VGHIVVASG---FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTI  476 (560)
Q Consensus       403 ~lsD~~--~~~~~~~R~~~l~~~~~l~~-~~~lll~~~---~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~  476 (560)
                      +++||+  ++     | ..+.+...+.. ++++++...   +...+.+..++.|++.+........++.|.++.++.|+.
T Consensus       310 ~l~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~  383 (451)
T 1pw4_A          310 WMSDKVFRGN-----R-GATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTA  383 (451)
T ss_dssp             HHHHHTSTTC-----H-HHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHH
T ss_pred             HHHHHHhcCC-----c-hhHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHhchHHHHHHHHHHHhchhhhhhH
Confidence            999998  43     2 23333333333 555544322   334456677888999998888888999999999999999


Q ss_pred             hhHHHhhhhh-HHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhh
Q 008597          477 FNTIAIASPV-GSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIR  541 (560)
Q Consensus       477 yG~~~~a~~~-g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r  541 (560)
                      +|+......+ |. .+++.+.|.++|..+            |+.+|++.+++++++.++.+++..+
T Consensus       384 ~~~~~~~~~~~g~-~~~~~~~g~l~~~~g------------~~~~~~~~~~~~~~~~~~~~~~~~~  436 (451)
T 1pw4_A          384 AGFTGLFGYLGGS-VAASAIVGYTVDFFG------------WDGGFMVMIGGSILAVILLIVVMIG  436 (451)
T ss_dssp             HHHHHHHHHHHHH-HHHHHHHHHHHHSSC------------SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHHHhcC------------cHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999887777 77 478899999999875            9999999999998888776655433
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query560
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.95
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.83
d1pw4a_ 447 Glycerol-3-phosphate transporter {Escherichia coli 99.06
d1pv7a_ 417 Lactose permease {Escherichia coli [TaxId: 562]} 98.67
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=6.6e-27  Score=243.52  Aligned_cols=413  Identities=15%  Similarity=0.146  Sum_probs=271.0

Q ss_pred             hchhHHHHHHHHHHHHhcC-cccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccc
Q 008597            9 LKSKWIATVASIWIQCCSG-ATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSF   86 (560)
Q Consensus         9 ~~~rw~~l~~~~~i~~~~G-~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~   86 (560)
                      .+.||.+++...+...+.. ....+++..|.++ ++|+|.+|+..+..+..++..+ .++.|.+.||+|           
T Consensus        20 ~~~~w~i~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g-----------   87 (447)
T d1pw4a_          20 RRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSN-----------   87 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHTT-SSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSC-----------
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------
Confidence            3457888777665544332 3356777778776 4899999999888888888876 789999999987           


Q ss_pred             cCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhh
Q 008597           87 LRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFL  165 (560)
Q Consensus        87 ~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~  165 (560)
                         +|+++.+|.++..++.++....... ..  +++.+....++.|.+.+..+.++.....+|||+ +||.+.|+...+.
T Consensus        88 ---~r~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~  161 (447)
T d1pw4a_          88 ---PRVFLPAGLILAAAVMLFMGFVPWA-TS--SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAH  161 (447)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHCHHH-HS--SSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHH
T ss_pred             ---chHHHHHHHHHHHHHHhhccccchh-hh--hHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhccccccccccccc
Confidence               9999999999999998875332211 11  245677778889999999999999999999975 5999999999999


Q ss_pred             hhhHHHHHHHHHHhcC--CCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcc
Q 008597          166 GLGGAALIQAYDTIWK--GRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENI  243 (560)
Q Consensus       166 GLsa~i~s~i~~~~f~--~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  243 (560)
                      ++|+.+...+......  ++....+++.+.......+                                           
T Consensus       162 ~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-------------------------------------------  198 (447)
T d1pw4a_         162 NVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVAL-------------------------------------------  198 (447)
T ss_dssp             HHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHH-------------------------------------------
T ss_pred             chhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHH-------------------------------------------
Confidence            9888776543322210  0111111111111111100                                           


Q ss_pred             cccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccc
Q 008597          244 FTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVK  323 (560)
Q Consensus       244 ~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (560)
                                      +.+..     .+    +..+..      +.   ++.++..     ++.++ +.     ++    
T Consensus       199 ----------------~~~~~-----~~----~~~~~~------~~---~~~~~~~-----~~~~~-~~-----~~----  229 (447)
T d1pw4a_         199 ----------------FAFAM-----MR----DTPQSC------GL---PPIEEYK-----NDYPD-DY-----NE----  229 (447)
T ss_dssp             ----------------HHHHH-----CC----CSSTTT------CC---CSCTTTC-----CC-----------------
T ss_pred             ----------------HHHHh-----cc----cchhhc------cc---chhhhhh-----hhccc-ch-----hh----
Confidence                            00000     00    000000      00   0000000     00000 00     00    


Q ss_pred             cccccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccc
Q 008597          324 AEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGG  402 (560)
Q Consensus       324 ~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G  402 (560)
                         +.++....++...++.++++.+|.+....++.........+..+.+.++ .+.+..+.+...++..+.+.+|+++.|
T Consensus       230 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  306 (447)
T d1pw4a_         230 ---KAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCG  306 (447)
T ss_dssp             ---------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---ccccccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhh
Confidence               0000011122345778999999999988888777777777777777765 588888888999999999999999999


Q ss_pred             cchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh---cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhH
Q 008597          403 YVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNT  479 (560)
Q Consensus       403 ~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~---~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~  479 (560)
                      +++||..+++   |.........+..++.++...   .++....+..+++|++.++........+.|.++.++.|+..|+
T Consensus       307 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~  383 (447)
T d1pw4a_         307 WMSDKVFRGN---RGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGF  383 (447)
T ss_dssp             HHHHHTSTTC---HHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHH
T ss_pred             hhhhhccccc---cccccchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            9999997543   222222222233333333221   2334456667788998888888899999999999999999999


Q ss_pred             HHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHH
Q 008597          480 IAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQV  549 (560)
Q Consensus       480 ~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~~~~~~  549 (560)
                      ......+++.+.++.+.|.+.|..|            |+..|.+++++++++.++..++..+++|+.++.
T Consensus       384 ~~~~~~~~g~~~~~~~~g~~~~~~g------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  441 (447)
T d1pw4a_         384 TGLFGYLGGSVAASAIVGYTVDFFG------------WDGGFMVMIGGSILAVILLIVVMIGEKRRHEQL  441 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSSC------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC------------hHHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence            8765555444578889999999987            889999999998888887777766555544443
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure