Citrus Sinensis ID: 008680

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------
Protein Sequence
MEPWSYGSEGKGAVANDRISPADSSSRSKGYLMGWELNTSCHNMLVSHREAPGNQSFGEFGFQEVVGKRLTKDNPIKDVLSSKNHFMNPNMPTPTTSFGEDESTSKRSSSVVDSNSTLDSSLIDLNLGRFVDQRDSHTSKFSHGTPKFSSSKSSAAPKRVRLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRKRLAGHNERRRKPQVGVHPGRTAKLLRSHEAFAGCKFQGTTLPMSSFICPDILPGGIFYPEKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYDFQKVVPPFHGNEVNAATESIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFSIFDTPSTIQGLSRISESGYAHPLLSSKSQNSPSPLSGIPVARPLVIGGSGGAHYNISQVSEKLIGVSSQASTSQASNKFSLSGNNSFEGSNLGSILMSDSSDAANFDVSNRFYRGSDFMSSKDRLSCEDGATIDLLKLSSQLQRVEHQNQFMQVKDENDSFCCLRIT
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccHHHHHHcccccccccccEEEEccEEHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccHHHHHHHHHHcccEEEccccccEEEccc
Secondary Structure Prediction (SSPRO)
ccccEEccccccEEccccccccccHHcccccEEcccccccccccccccccccccccHHccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccEEEEccccccHHHHHHHHHHccEHHHcccccEEEEcccHHHHHHHcHHHccHHHHcHccHHHHHHHHccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccEccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccHcccccccccccccccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccEEEEEccccEccccccccccccccccccEEEHHHHcHHHHHHHHHHHccEEEEccccccEcccc
Coil and Loop (DISEMBL)
mepwsygsegkgavandrispadsssrskgylmgwelNTSCHNMLVshreapgnqsfgefgfQEVVgkrltkdnpikdvlssknhfmnpnmptpttsfgedestskrsssvvdsnstldsslidlnlgrfvdqrdshtskfshgtpkfssskssaapkrvrlsgissHTAYCQVygcnkdlssskdyhkrhKVCEAHSKAAKVIVNEIEQRFCQqcsrfhfldefddgkRSCRKRLaghnerrrkpqvgvhpgrtaKLLRSHeafagckfqgttlpmssficpdilpggifypekcrtndwckcvkvedmndynavsatsiskgnlhpksffpqydfqkvvppfhgnevnaatESIFSatsarypqdlggpksvssplfrdislgseefsifdtpstiqglsrisesgyahpllssksqnspsplsgipvarplviggsggahynisQVSEKLIgvssqastsqasnkfslsgnnsfegsnlgsilmsdssdaanfdvsnrfyrgsdfmsskdrlscedgatIDLLKLSSQLQRVEHQNQFmqvkdendsfcclrit
Flexible Loop (DISEMBL)
mepwsygsegkgavandrispadssSRSKGYLMGWELNTSCHNMLVSHREAPGNQSFGEFGFQEVVGKRLTKDNPIKDvlssknhfmnpnMPTPTTSFGEDESTSKRsssvvdsnstldsslIDLNLGRFVDQRDShtskfshgtpkfssskssaapKRVRLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRKrlaghnerrrkpqvgvhpgrtAKLLRSHEAFAGCKFQGTTLPMSSFICPDILPGGIFYPEKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYDFQKVVPPFHGNEVNAATESIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFSIFDTPSTIQGLSRISESGYAHPLLSSKSQNSPSPLSGIPVARPLVIGGSGGAHYNISQVSEKLIGVSSQASTSQASNKFSLSGNNSFEGSNLGSILMSDSSDAANFDVSNRFYRGSDFMSSKDRLSCEDGATIDLLKLSSQLQRVEHQNqfmqvkdendsfcclrit
Low Complexity Region (SEG)
MEPWSYGSEGKGAVANDRISPADSSSRSKGYLMGWELNTSCHNMLVSHREAPGNQSFGEFGFQEVVGKRLTKDNPIKDVLSSKNHFMNPNMPTPTTSFGEDEstskrsssvvdsnstldsslIDLNLGRFVDQRDSHTSKFSHGTpkfssskssaapkRVRLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRKRLAGHNERRRKPQVGVHPGRTAKLLRSHEAFAGCKFQGTTLPMSSFICPDILPGGIFYPEKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYDFQKVVPPFHGNEVNAATESIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFSIFDTPSTIQGLSRISESGYAHpllssksqnspsplsGIPVARPLVIGGSGGAHYNISQVSEKLIGVSSQASTSQASNKFSLSGNNSFEGSNLGSILMSDSSDAANFDVSNRFYRGSDFMSSKDRLSCEDGATIDLLKLSSQLQRVEHQNQFMQVKDENDSFCCLRIT
Disordered region (IsUnstruct)
******************************YLMGWELNTSCHNMLVSH********FGEFGFQEVVGK************************************************************************************************ISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDD****************************AKLLRSHEAFAGCKFQGTTLPMSSFICPDILPGGIFYPEKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYDFQKVVPPFHGNEVNAAT**IF*********************************IF*************************************VARPLVIGGSGGAHYNISQV***********************************************************************ATIDLLKL*********************SFCCL***
Disordered Region (DISOPRED)
****S***************************MGWELNTSCHNMLVSHREA***************************************************************************LGRFV*****************************************QVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSC************************************************************************************************************************************************************************************************************************************************************************DVSNRFYRGS*************GATIDLL*********************NDSFCCLRIT
Disordered Region (DISEMBL)
************AVAND**********SKGYLMGWELNTSCHNMLVSHREAPGNQSFGEFGFQEVVGKRLTKDNPIKDVLSSKNHFMNPNMPTP**********************TLDSSLIDLNLGRFVDQRD*************************RLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRKRLAGHNERRRKPQVGVHPGRTAKLLRSHEAFAGCKFQGTTLPMSSFICPDILPGGIFYPEKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYDFQKVVPPFHGNEVNAATESIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFSIFDTPSTIQGLSRISESGYAHP*************SGIPVARPLVIGGSGGAHYNISQVSEKLI**************FSLSGNNSFEGSNLGSILMSDSSDAANFDVSNRFYRGSDFMSSKDRLSCEDGATIDLLKLSSQLQRVEHQNQFMQVKDENDSFCCLRIT
Disordered Region (DISPRO)
**********KGAVANDRISPADSSSRSKGYLMGWELNTSCHNMLVSHREAPGNQSFGEFGFQEVVGKRLTKDNPIKDVLSSK****NPN*******************************LIDLNLGRFVDQRDS*******************************HTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRKR*********************************KFQGTTLPMSSFICPDILPGGIFYPEKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYDFQKVVPPFHGNEVNAATESIFSATSA****************************************************************GIPVARPLVIGGSGGAHYNISQVSEKLIGV************FSLSGNNSFEGSNLGSILMSDSSDAANFDVSNRFYRGSDFMSSKDRLSCEDGATIDLLKLSSQLQRVEHQNQFMQVKDENDSFCCLRI*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEPWSYGSEGKGAVANDRISPADSSSRSKGYLMGWELNTSCHNMLVSHREAPGNQSFGEFGFQEVVGKRLTKDNPIKDVLSSKNHFMNPNMPTPTTSFGEDESTSKRSSSVVDSNSTLDSSLIDLNLGRFVDQRDSHTSKFSHGTPKFSSSKSSAAPKRVRLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRKRLAGHNERRRKPQVGVHPGRTAKLLRSHEAFAGCKFQGTTLPMSSFICPDILPGGIFYPEKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYDFQKVVPPFHGNEVNAATESIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFSIFDTPSTIQGLSRISESGYAHPLLSSKSQNSPSPLSGIPVARPLVIGGSGGAHYNISQVSEKLIGVSSQASTSQASNKFSLSGNNSFEGSNLGSILMSDSSDAANFDVSNRFYRGSDFMSSKDRLSCEDGATIDLLKLSSQLQRVEHQNQFMQVKDENDSFCCLRIT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	557	2.2.26 [Sep-21-2011]
Q94JW8	405	Squamosa promoter-binding	yes	no	0.251	0.345	0.620	7e-46
A2YGR5	475	Squamosa promoter-binding	N/A	no	0.430	0.505	0.353	1e-31
Q5Z818	475	Squamosa promoter-binding	yes	no	0.430	0.505	0.353	2e-31
Q8S9L0	396	Squamosa promoter-binding	no	no	0.190	0.267	0.570	2e-29
A3A2Z8	469	Squamosa promoter-binding	no	no	0.258	0.307	0.48	2e-29
A2X0Q6	469	Squamosa promoter-binding	N/A	no	0.258	0.307	0.48	2e-29
Q75LH6	969	Squamosa promoter-binding	no	no	0.166	0.095	0.610	3e-29
Q8RY95	1035	Squamosa promoter-binding	no	no	0.157	0.085	0.647	4e-29
Q9S840	419	Squamosa promoter-binding	no	no	0.149	0.198	0.655	7e-29
Q9S7P5	927	Squamosa promoter-binding	no	no	0.157	0.094	0.662	1e-28

>sp|Q94JW8|SPL6_ARATH Squamosa promoter-binding-like protein 6 OS=Arabidopsis thaliana GN=SPL6 PE=2 SV=2

 Score =  185 bits (470), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 90/145 (62%), Positives = 105/145 (72%), Gaps = 5/145 (3%)

Query: 149 SSSKSSAAP-KRVRLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNE 207
           +SS+  A P K+ R S + S    CQVYGC+KDLSSSKDYHKRH+VCEAHSK + VIVN 
Sbjct: 100 TSSRGFALPSKKSRASNLCSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNG 159

Query: 208 IEQRFCQQCSRFHFLDEFDDGKRSCRKRLAGHNERRRKPQVGVHPGRTAKLLRSHEAFAG 267
           +EQRFCQQCSRFHFL EFDDGKRSCR+RLAGHNERRRKP     PG+  KLLR+ +   G
Sbjct: 160 LEQRFCQQCSRFHFLSEFDDGKRSCRRRLAGHNERRRKPAFYFLPGKRHKLLRTSQDVVG 219

Query: 268 CKFQGTTLPMSSFICPDILPGGIFY 292
            KF    L  SS + P+  PG + Y
Sbjct: 220 NKF----LENSSLVLPESFPGSLLY 240

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.
Arabidopsis thaliana (taxid: 3702)

>sp|A2YGR5|SPL12_ORYSI Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. indica GN=SPL12 PE=2 SV=1

 Score =  138 bits (347), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 135/263 (51%), Gaps = 23/263 (8%)

Query: 158 KRVRLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCS 217
           K++++S  S+ ++YCQV GC  DLSS+++YH++HKVCEAHSKA KVIV+ +E+RFCQQCS
Sbjct: 166 KKMKVSQQSTQSSYCQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCS 225

Query: 218 RFHFLDEFDDGKRSCRKRLAGHNERRRKPQ---VGVHPGRTAKLL----RSHEAFAGCKF 270
           RFH L EFD  K+SCR+RL+ HN RRRKPQ   +     R A +     +  + + G   
Sbjct: 226 RFHGLAEFDQKKKSCRRRLSDHNARRRKPQQEAISFGSSRLATMFYDARQQTDIYFGQSP 285

Query: 271 QGTTLPMSSFICPDILPGGIFYPEKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKS 330
            G     +   C D L G  F   K       K + +ED+N        ++    +H   
Sbjct: 286 FGQVRSNAISSC-DNLGGFKFTEAKLPWMKPMKTIGLEDLNFSTLQMPGNVVSHTVH--- 341

Query: 331 FFPQYDFQKVVPPFHGNEVNAATESIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFS 390
               +DF  ++ PF GN      + +  A +       G P      L R +SL S +  
Sbjct: 342 ---HHDFDGLI-PFKGNTTKVLNQGVDPACAVVSSNSNGAPD-----LRRALSLLSSDSW 392

Query: 391 IFDTPSTIQGLSRISESGYAHPL 413
               P+ +Q  S++   G   PL
Sbjct: 393 ---GPADVQAGSQVHPGGVMPPL 412

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q5Z818|SPL12_ORYSJ Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. japonica GN=SPL12 PE=2 SV=1

 Score =  137 bits (345), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 135/263 (51%), Gaps = 23/263 (8%)

Query: 158 KRVRLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCS 217
           K++++S  S+ ++YCQV GC  DLSS+++YH++HKVCEAHSKA KVIV+ +E+RFCQQCS
Sbjct: 166 KKMKVSQQSTQSSYCQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCS 225

Query: 218 RFHFLDEFDDGKRSCRKRLAGHNERRRKPQ---VGVHPGRTAKLL----RSHEAFAGCKF 270
           RFH L EFD  K+SCR+RL+ HN RRRKPQ   +     R A +     +  + + G   
Sbjct: 226 RFHGLAEFDQKKKSCRRRLSDHNARRRKPQQEAISFGSSRLATMFYDARQQTDIYFGQSP 285

Query: 271 QGTTLPMSSFICPDILPGGIFYPEKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKS 330
            G     +   C D L G  F   K       K + +ED+N        ++    +H   
Sbjct: 286 FGQVRSNAISSC-DNLGGFKFTEAKLPWMKPMKTIGLEDLNFSTLQMPGNVVSHTVH--- 341

Query: 331 FFPQYDFQKVVPPFHGNEVNAATESIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFS 390
               +DF  ++ PF GN      + +  A +       G P      L R +SL S +  
Sbjct: 342 ---HHDFDGLI-PFKGNTPKVLNQGVDPACAVVSSNSNGAPD-----LRRALSLLSSDSW 392

Query: 391 IFDTPSTIQGLSRISESGYAHPL 413
               P+ +Q  S++   G   PL
Sbjct: 393 ---GPADVQAGSQVHPGGVMPPL 412

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8S9L0|SPL10_ARATH Squamosa promoter-binding-like protein 10 OS=Arabidopsis thaliana GN=SPL10 PE=2 SV=2

 Score =  131 bits (329), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 61/107 (57%), Positives = 77/107 (71%), Gaps = 1/107 (0%)

Query: 153 SSAAPKRVRLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRF 212
           S  A K+ +  G S     CQ+ GC  DLSSSKDYH++H+VCE HSK  KV+V+ +E+RF
Sbjct: 157 SVVARKKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRF 216

Query: 213 CQQCSRFHFLDEFDDGKRSCRKRLAGHNERRRKPQVGVHPGRTAKLL 259
           CQQCSRFH + EFD+ KRSCRKRL+ HN RRRKPQ GV P  + ++ 
Sbjct: 217 CQQCSRFHAVSEFDEKKRSCRKRLSHHNARRRKPQ-GVFPLNSERVF 262

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|A3A2Z8|SPL3_ORYSJ Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. japonica GN=SPL3 PE=2 SV=1

 Score =  131 bits (329), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/150 (48%), Positives = 93/150 (62%), Gaps = 6/150 (4%)

Query: 100 EDESTSKRSSSVVDSNSTLDSSLIDLNLGRFVDQRDSHTSKFSHGTPKFSS--SKSSAAP 157
           +D  TS+  S VV +N      LI L LG+     D    +    +P   S  + S    
Sbjct: 112 DDTGTSR--SPVVAANRV--EPLIGLKLGKRTYFEDVCGGQNVKSSPSGVSVATPSPGLA 167

Query: 158 KRVRLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCS 217
           K+V+++  ++   +CQV GCN DLSS+K YH++H+VCE HSK  KVIV  +E+RFCQQCS
Sbjct: 168 KKVKVAQQNTQNPHCQVEGCNVDLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFCQQCS 227

Query: 218 RFHFLDEFDDGKRSCRKRLAGHNERRRKPQ 247
           RFH L EFD  KRSCR+RL  HN RRRKPQ
Sbjct: 228 RFHGLAEFDQKKRSCRRRLHDHNARRRKPQ 257

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2X0Q6|SPL3_ORYSI Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. indica GN=SPL3 PE=2 SV=1

 Score =  131 bits (329), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/150 (48%), Positives = 93/150 (62%), Gaps = 6/150 (4%)

Query: 100 EDESTSKRSSSVVDSNSTLDSSLIDLNLGRFVDQRDSHTSKFSHGTPKFSS--SKSSAAP 157
           +D  TS+  S VV +N      LI L LG+     D    +    +P   S  + S    
Sbjct: 112 DDTGTSR--SPVVAANRV--EPLIGLKLGKRTYFEDVCGGQNVKSSPSGVSVATPSPGLA 167

Query: 158 KRVRLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCS 217
           K+V+++  ++   +CQV GCN DLSS+K YH++H+VCE HSK  KVIV  +E+RFCQQCS
Sbjct: 168 KKVKVAQQNTQNPHCQVEGCNVDLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFCQQCS 227

Query: 218 RFHFLDEFDDGKRSCRKRLAGHNERRRKPQ 247
           RFH L EFD  KRSCR+RL  HN RRRKPQ
Sbjct: 228 RFHGLAEFDQKKRSCRRRLHDHNARRRKPQ 257

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q75LH6|SPL6_ORYSJ Squamosa promoter-binding-like protein 6 OS=Oryza sativa subsp. japonica GN=SPL6 PE=2 SV=1

 Score =  130 bits (327), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 58/95 (61%), Positives = 69/95 (72%), Gaps = 2/95 (2%)

Query: 158 KRVRLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCS 217
           K++R+ G S     CQV GC  DL+  +DYH+RHKVCE H+KA   +V    QRFCQQCS
Sbjct: 138 KKIRVQGGSPSGPACQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVVGNTVQRFCQQCS 197

Query: 218 RFHFLDEFDDGKRSCRKRLAGHNERRRK--PQVGV 250
           RFH L EFD+GKRSCR+RLAGHN RRRK  P+V V
Sbjct: 198 RFHPLQEFDEGKRSCRRRLAGHNRRRRKTRPEVAV 232

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8RY95|SPL14_ARATH Squamosa promoter-binding-like protein 14 OS=Arabidopsis thaliana GN=SPL14 PE=2 SV=3

 Score =  130 bits (326), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 57/88 (64%), Positives = 66/88 (75%)

Query: 158 KRVRLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCS 217
           K+VR      +   CQV  C +DLS +KDYH+RHKVCE HSKA K +V +  QRFCQQCS
Sbjct: 106 KKVRSGSPGGNYPMCQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCS 165

Query: 218 RFHFLDEFDDGKRSCRKRLAGHNERRRK 245
           RFH L EFD+GKRSCR+RLAGHN RRRK
Sbjct: 166 RFHLLSEFDEGKRSCRRRLAGHNRRRRK 193

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May play a role in plant development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S840|SPL2_ARATH Squamosa promoter-binding-like protein 2 OS=Arabidopsis thaliana GN=SPL2 PE=2 SV=1

 Score =  129 bits (323), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 57/87 (65%), Positives = 71/87 (81%), Gaps = 4/87 (4%)

Query: 169 TAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDG 228
           T +CQV GCN DLSS+KDYH++H++CE HSK  KV+V+ +E+RFCQQCSRFH L EFD+ 
Sbjct: 166 TPHCQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEK 225

Query: 229 KRSCRKRLAGHNERRRKPQVGVHPGRT 255
           KRSCR+RL+ HN RRRKP    +PGRT
Sbjct: 226 KRSCRRRLSDHNARRRKP----NPGRT 248

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S7P5|SPL12_ARATH Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana GN=SPL12 PE=1 SV=1

 Score =  128 bits (322), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 59/89 (66%), Positives = 67/89 (75%), Gaps = 1/89 (1%)

Query: 158 KRVRLSG-ISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQC 216
           K+ +L G I S    CQV  C  DLS  KDYH+RHKVCE HSKA   +V  I QRFCQQC
Sbjct: 112 KKTKLGGGIPSRAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQC 171

Query: 217 SRFHFLDEFDDGKRSCRKRLAGHNERRRK 245
           SRFH L+EFD+GKRSCR+RLAGHN+RRRK
Sbjct: 172 SRFHVLEEFDEGKRSCRRRLAGHNKRRRK 200

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	557
225456548	557	PREDICTED: squamosa promoter-binding-lik	0.989	0.989	0.571	1e-159
449441121	550	PREDICTED: uncharacterized protein LOC10	0.976	0.989	0.566	1e-155
255547135	557	LIGULELESS1 protein, putative [Ricinus c	0.971	0.971	0.566	1e-153
356507038	567	PREDICTED: uncharacterized protein LOC10	0.987	0.970	0.524	1e-140
449439349	548	PREDICTED: uncharacterized protein LOC10	0.962	0.978	0.505	1e-134
449522424	510	PREDICTED: squamosa promoter-binding-lik	0.886	0.968	0.517	1e-132
356564948	542	PREDICTED: uncharacterized protein LOC10	0.951	0.977	0.493	1e-123
356513469	553	PREDICTED: uncharacterized protein LOC10	0.962	0.969	0.493	1e-123
359472829	611	PREDICTED: squamosa promoter-binding-lik	0.919	0.837	0.410	7e-92
297738116	498	unnamed protein product [Vitis vinifera]	0.840	0.939	0.423	1e-86

>gi|225456548|ref|XP_002265203.1| PREDICTED: squamosa promoter-binding-like protein 6-like [Vitis vinifera]

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 322/563 (57%), Positives = 393/563 (69%), Gaps = 12/563 (2%)

Query: 1   MEPWSYGSEGKGAVANDRISPADSSSRSKGYLMGWELNTSC---HNMLVSHREAPGNQSF 57
           M  WSY S+ K  V++      +SS+RSK   MGWEL T C   +++LVS ++   NQ F
Sbjct: 1   MGSWSYVSQEKEFVSDATDLQPNSSARSKNVFMGWELKTPCGYGNSILVSSQQVIQNQGF 60

Query: 58  GEFGFQEVVGKRLTKDNPIKDVLSSKNH---FMNPNMPTPTTSFGEDESTSKRSSSVVDS 114
           GEFG  E+V K+L  DN I+DV   K      +N  M +P     +DES+SK SSSV++S
Sbjct: 61  GEFGIPEMVRKQL-PDNSIRDVSCGKGGDGIMVNSIMVSPNVFPRDDESSSKLSSSVMES 119

Query: 115 NSTLDSSLIDLNLGRFVDQRDSHTSKFSHGTPKFSSSKSSAAPKRVRLSGISSHTAYCQV 174
           NS  DS LIDL LGRF D  DS   K S   P   S++SS   KRVR  G++S TA+CQV
Sbjct: 120 NSQ-DSLLIDLKLGRFADHSDSQNCKPSKANPSLPSAESSTPAKRVRAVGLNSQTAFCQV 178

Query: 175 YGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRK 234
           +GCNKDLSSSKDYHKRHKVCE HSK AKVIVN IEQRFCQQCSRFH L EFDDGKRSCRK
Sbjct: 179 HGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRK 238

Query: 235 RLAGHNERRRKPQVGVHPGRTAKLLRSHEAFAGCKFQGTTLPMSSFICPDILPGGIFYPE 294
           RLAGHNERRRKPQVG+HPGR  +LL+S+  +AG +FQGTTL  +SFIC DILP G+  PE
Sbjct: 239 RLAGHNERRRKPQVGIHPGRAGRLLQSYNGYAGNRFQGTTLTTASFICQDILPSGLLPPE 298

Query: 295 KCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYDFQKVVPPFHGNEVNAATE 354
           K   +DWCK +KVED  DY+  S   I+ G+ HPKS FP ++F+K    F  N  N  T 
Sbjct: 299 KYGMSDWCKRIKVEDGTDYSPQSTIPITNGHPHPKSLFPTFEFEKQYSSFQDNGAN--TG 356

Query: 355 SIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFSIFDTPSTIQGLSRISESGYAHPLL 414
           SIFS  ++RYP DL    S     F+D SLG+E+ S+FD  ST+Q LS IS+SG A  LL
Sbjct: 357 SIFSEHNSRYPHDLADANSGPHSFFQDTSLGNEDLSVFDAGSTVQALSGISDSGRALSLL 416

Query: 415 SSKSQNSPSPLSGIPVARPLVIGGSGGAHYNISQVSEKLIGVSSQASTSQASNKFSLSGN 474
           SS+SQNS S  SGIP+  PL++ G   AHYNI+QVSEK +GVS Q S S+  NKF  SG 
Sbjct: 417 SSQSQNSSSHSSGIPMIHPLIMPGC-HAHYNIAQVSEKFLGVSPQVSMSRVPNKFLSSGM 475

Query: 475 NSFEGSNLGSILMSDSSDAANFDVSNRFYRGSDFMSSKDRLSCEDGATIDLLKLSSQLQR 534
           NS EG++LG IL+SD S+  NF+V++  ++GSDF+++KD L CE G TIDLL+LSSQL R
Sbjct: 476 NSAEGNHLGPILISDCSEPVNFEVTDGIFQGSDFVNTKDCLPCETGPTIDLLQLSSQLHR 535

Query: 535 VEHQNQFMQVKDENDSFCCLRIT 557
           VEHQ Q + VK END+F CLRIT
Sbjct: 536 VEHQRQSIHVKQENDTF-CLRIT 557

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441121|ref|XP_004138332.1| PREDICTED: uncharacterized protein LOC101221286 [Cucumis sativus]

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 319/563 (56%), Positives = 392/563 (69%), Gaps = 19/563 (3%)

Query: 1   MEPWSYGSEGKGAVANDRISPADSSSRSKGYLMGWELNTSCH---NMLVSHREAPGNQSF 57
           ME WSY SEGKG ++++  SP  S +R+K  L+GWE    C     ML + ++   NQ F
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCSFGSTMLPTSQQV-DNQGF 59

Query: 58  GEFGFQEVVGKRLTKDNPIKDVLSSK---NHFMNPNMPTPTTSFGEDESTSKRSSSVVDS 114
           GE  F E++GK+L  DN + D+LSSK     F+NP M +     GEDESTSK SSS+VDS
Sbjct: 60  GELVFPEMIGKQL-PDNSVCDILSSKVVGGRFLNPAMNSSIAFLGEDESTSKLSSSIVDS 118

Query: 115 NSTLDSSLIDLNLGRFVDQRDSHTSKFSHGTPKFSSSKSSAAPKRVRLSGISSHTAYCQV 174
           +S  DSS IDL LGRF DQRD+H  KF  G P  SSS+SS   KRVR SG++S T +CQV
Sbjct: 119 SSR-DSSFIDLKLGRFADQRDAHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYFCQV 177

Query: 175 YGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRK 234
           YGCNKDLSS KDYHKRHKVCE HSK AKVIVN IEQRFCQQCSRFH L EFDDGKRSCRK
Sbjct: 178 YGCNKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRK 237

Query: 235 RLAGHNERRRKPQVGVHPGRTAKLLRSHEAFAGCKFQGTTLPMSSFICPDILPGGIFYPE 294
           RLAGHNERRRKPQV ++ GRT + L+S   + G + QGT L  +SFIC +ILP G+ +PE
Sbjct: 238 RLAGHNERRRKPQVAINSGRTGRFLQS---YNGSRLQGTALTATSFICQEILPNGLLHPE 294

Query: 295 KCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYDFQKVVPPFHGNEVNAATE 354
           K  T+DWC+ VK+ED N+Y  +SA  +  G+LH KS F  YD +  VPPFH N  NA+  
Sbjct: 295 KYGTSDWCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASAT 354

Query: 355 SIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFSIFDTPSTIQGLSRISESGYAHPLL 414
           +IF   S +YP  +GG  S S   F + SLGSE FS++   ST + LS +S+SG A  LL
Sbjct: 355 NIFKENSNQYPLSVGGVNSNSRSYFHNPSLGSEYFSVYSAASTDR-LSGLSDSGCALSLL 413

Query: 415 SSKSQNSPSPLSGIPVARPLVIGGSGGAHYNISQVSEKLIGVSSQASTSQASNKFSLSGN 474
           SS++QNS +  SGIP+ RPLV+   G  HY++SQ+SEKL+GVSSQ S S  SNKF+ SG 
Sbjct: 414 SSQTQNSSTHSSGIPIGRPLVL-LDGQNHYSMSQLSEKLMGVSSQVSVSGVSNKFNSSGL 472

Query: 475 NSFEGSNLGSILMSDSSDAANFDVSNRFYRGSDFMSSKDRLSCEDGATIDLLKLSSQLQR 534
           N+ EG  LG I   ++SDA NF++SNR + GS+          E G TIDLL+LSSQLQR
Sbjct: 473 NTSEGCTLGPISTPETSDAVNFEISNRIFHGSNLADPG-----EGGPTIDLLQLSSQLQR 527

Query: 535 VEHQNQFMQVKDENDSFCCLRIT 557
           VEHQ Q MQVK E+++FCCLRIT
Sbjct: 528 VEHQRQAMQVKQESNAFCCLRIT 550

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547135|ref|XP_002514625.1| LIGULELESS1 protein, putative [Ricinus communis] gi|223546229|gb|EEF47731.1| LIGULELESS1 protein, putative [Ricinus communis]

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 319/563 (56%), Positives = 399/563 (70%), Gaps = 22/563 (3%)

Query: 1   MEPWSYGSEGKGAVANDRISPADSSSRSKGYLMGWELNTSC----HNMLVSHREAPGNQS 56
           M+ W+Y S GKG V+N+  S +DS ++SK  LMGW+L T+C    +N++V+ ++A  N  
Sbjct: 1   MQSWNYVSGGKGFVSNETASSSDSIAKSKNVLMGWDLKTACGFGNNNVVVAGQQAIENHC 60

Query: 57  FGEFGFQEVVGKRLTKDNPIKDVLSSK-------NHFMNPNMPTPTTSFGEDESTSKRSS 109
           FGE  +QE++GK+L  DN I++ LSS+       NHFM  NM   +    E ESTS+ S 
Sbjct: 61  FGELNYQELMGKQL-PDNSIRNALSSEADGGKSINHFM-VNMNVFSL---EHESTSRLSR 115

Query: 110 SVVDSNSTLDSSLIDLNLGRFVDQRDSHTSKFSHGTPKFSSSKSSAAPKRVRLSGISSHT 169
           +VV+SNS  DSS IDL LGRF D  + H S+ S G    SSS+SS  PKR+R+ G++SH 
Sbjct: 116 TVVESNSR-DSSFIDLKLGRFGDPTEGHNSRISKGASVMSSSESSTPPKRLRV-GVNSHP 173

Query: 170 AYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGK 229
           A+CQVYGCNKDLSSSK+YHKRHKVCE HSK +KVIVN IEQRFCQQCSRFH L EFDDGK
Sbjct: 174 AHCQVYGCNKDLSSSKEYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGK 233

Query: 230 RSCRKRLAGHNERRRKPQVGVHPGRTAKLLRSHEAFAGCKFQGTTLPMSSFICPDILPGG 289
           RSCRKRLAGHNERRRKPQVG H GRT KLL+S+      +F GT L  +SFIC DILPGG
Sbjct: 234 RSCRKRLAGHNERRRKPQVGPHSGRTGKLLQSYNGIDTSRFHGTAL--TSFICQDILPGG 291

Query: 290 IFYPEKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYDFQKVVPPFHGNEV 349
             +P++  T++WC+ +KVED   +N +S+  +S G+ H KS FP  +  KV    HGNE 
Sbjct: 292 PMHPKRYGTDNWCRQIKVED-GYFNPLSSIPVSSGHPHSKSLFPSNNLDKVFLACHGNEA 350

Query: 350 NAATESIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFSIFDTPSTIQGLSRISESGY 409
             AT S  S ++ RYP DLGG  S S  L +D SLG  +FS FD  S +QG+S I+ SG 
Sbjct: 351 TTATGSTLSESTNRYPHDLGGSISSSQSLIQDASLGQADFSAFDAASNVQGVSGITNSGS 410

Query: 410 AHPLLSSKSQNSPSPLSGIPVARPLVIGGSGGAHYNISQVSEKLIGVSSQASTSQASNKF 469
           A  LLSS+S N  S  SGI +A PLV+ G   +HY++SQVSEKL+G+SSQAS     NKF
Sbjct: 411 ALSLLSSQSHNLSSHSSGISMACPLVLPGR-SSHYSVSQVSEKLVGISSQASAGAMQNKF 469

Query: 470 SLSGNNSFEGSNLGSILMSDSSDAANFDVSNRFYRGSDFMSSKDRLSCEDGATIDLLKLS 529
           S SG +S EGS LGSIL+SD SDA NF +++  Y+GS+FM++KD LSCEDG TIDLL+LS
Sbjct: 470 SSSGTSSAEGSRLGSILLSDGSDAINFVIADGMYQGSNFMNAKDCLSCEDGTTIDLLQLS 529

Query: 530 SQLQRVEHQNQFMQVKDENDSFC 552
           SQL+RVE Q Q MQVK END+FC
Sbjct: 530 SQLERVERQKQSMQVKQENDAFC 552

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356507038|ref|XP_003522278.1| PREDICTED: uncharacterized protein LOC100777766 [Glycine max]

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 301/574 (52%), Positives = 379/574 (66%), Gaps = 24/574 (4%)

Query: 1   MEPWSYGSEGKGAVANDRISPADSSSRSKGYLMGWELNTSC---HNMLVSHREAPGNQSF 57
           ME WSY +E KG V+++ +SP ++  RSKG   GWEL T C   ++ML   ++   +Q F
Sbjct: 1   MESWSYVAEEKGYVSSEALSPPNTLERSKGSCFGWELKTPCSFSNDMLGLGQQNVEDQGF 60

Query: 58  GEFGFQEVVGKRLTKD--NPIKDVLSSKNHFM---------NPNMPTPTTSFGEDESTSK 106
           GE GF  ++GK+L  D  NPI  V S K   +         +P +  P      ++  SK
Sbjct: 61  GELGFPGMLGKQLCGDDPNPIGAVQSRKVDDVVVDCRITSPSPVVAAPNGFSSREDFNSK 120

Query: 107 RSSSVVDSNSTLDSSLIDLNLGRFVDQRDSHTSKFSHGTPKFSSSKSSAAPKRVRLSGIS 166
            S+++VDSN    +SLIDL LG F D  D+    FS G P  SSS+ S  PKRVR SG  
Sbjct: 121 LSNALVDSNG--GNSLIDLKLGWFADHGDAMVPTFSKGAPILSSSELSTPPKRVRASGAH 178

Query: 167 SHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFD 226
           S TAYC VYGCNKDLS  KDYHKRHKVCE HSK +KVIVN IEQRFCQQCSRFH L EFD
Sbjct: 179 SQTAYCLVYGCNKDLSGCKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLAEFD 238

Query: 227 DGKRSCRKRLAGHNERRRKPQVGVHPGRTAKLLRSHEAFAGCKFQGTTLPMSSFICPDIL 286
           DGKRSCRKRLAGHNERRRKPQVG+H G+  +LL+ +   A  +FQ T L  SSFIC +IL
Sbjct: 239 DGKRSCRKRLAGHNERRRKPQVGIHSGKAGRLLQPYAGIADSRFQETML-TSSFICQEIL 297

Query: 287 PGGIFYPEKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHP--KSFFPQYDFQKVVPPF 344
           P G+   EK   +D  + +K ED   +     +SI   N HP  +S FP Y   K +P  
Sbjct: 298 PSGVLSSEKYGASDMWRPIKAEDSTGFTFRPLSSIPITNGHPQSRSLFPSYS-GKQLPFL 356

Query: 345 HGNEVNAATESIFSATSARY-PQDLGGPKSVSSPLFRDISLGSEEFSIFDTPSTIQGLSR 403
           H N   +AT +IFS  + +Y P  LGG  S S  LF+D SLG E+F++FDT S +QGLS 
Sbjct: 357 HENGATSATGNIFSENNNQYNPPSLGGQSSGSQSLFQDSSLGREDFNVFDTESAVQGLSG 416

Query: 404 ISESGYAHPLLSSKSQNSPSPLSGIPVARPLVIGGSGGAHYNISQVSEKLIGVSSQASTS 463
           IS+SG A  LLSS+SQNS    SGIP+A P+VI  S  +HYN+S+VSEK+IG+SSQAS S
Sbjct: 417 ISDSGCALSLLSSQSQNSSGQSSGIPIAHPMVI-PSSHSHYNMSRVSEKMIGISSQAS-S 474

Query: 464 QASNKFSLSGNNSFEGSNLGSILMSDSSDAANFDVSNRFYRGSDFMSSKDRLSCEDGATI 523
             S++F     N  +GS+L  IL+SD+++  NF+++N  ++GSDF++ KDRLSCED  TI
Sbjct: 475 GVSDRFPPE-FNPVDGSHLSPILISDNNEIINFEMANGIFQGSDFVNVKDRLSCEDSLTI 533

Query: 524 DLLKLSSQLQRVEHQNQFMQVKDENDSFCCLRIT 557
           DLL+LSSQLQRVE+Q   +QVK ENDS C LRIT
Sbjct: 534 DLLQLSSQLQRVENQRLSLQVKQENDSSCSLRIT 567

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439349|ref|XP_004137448.1| PREDICTED: uncharacterized protein LOC101206747 [Cucumis sativus] gi|449486905|ref|XP_004157437.1| PREDICTED: uncharacterized protein LOC101225600 [Cucumis sativus]

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 279/552 (50%), Positives = 369/552 (66%), Gaps = 16/552 (2%)

Query: 1   MEPWSYGSEGKGAVANDRISPADSSSRSKGYLMGWELNTSC----HNMLVSHREAPGNQS 56
           ME W+YGS+GKG ++++  S  +S  RSK  L+GWE    C    + +L S  +   NQS
Sbjct: 1   MESWNYGSQGKGFLSDEMNSSTNSPLRSKYSLLGWEFKNPCSFGDNMLLTSGAQHVENQS 60

Query: 57  FGEFGFQEVVGKRLTKDNPIKDVLSSKN---HFMNPNMPTPTTSFGEDESTSKRSSSVVD 113
           FGE  F ++VGK+L  D+ +  VL++K      +N  +PT     GE+ESTSK S S+VD
Sbjct: 61  FGELEFPQMVGKQL-PDDSVSGVLNTKTDGGRNLNLVLPTSHPLHGEEESTSKLSGSIVD 119

Query: 114 SNSTLDSSLIDLNLGRFVDQRDSHTSKFSHGTPKFSSSKSSAAPKRVRLSGISSHTAYCQ 173
           SN+  DSSLIDL LGRF+DQ D+H+SK+S      SS++SS + K++R  G++  TA+CQ
Sbjct: 120 SNNR-DSSLIDLKLGRFIDQGDAHSSKYSKRAAISSSTESSTSQKKMRSQGVNFQTAFCQ 178

Query: 174 VYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCR 233
           VYGCNKDLSSSKDYHKRHKVCE HSK AKVIVN IEQRFCQQCSRFH L EFDDGKRSCR
Sbjct: 179 VYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLVEFDDGKRSCR 238

Query: 234 KRLAGHNERRRKPQVGVHPGRTAKLLRSHEAFAGCKFQGTTLPMSSFICPDILPGGIFYP 293
           KRLAGHNERRRKPQV  H GR  +LL+ +      +FQ  TL  +SFIC DIL  G++YP
Sbjct: 239 KRLAGHNERRRKPQVSFHSGRAQRLLQPYNGIGDSRFQEKTLTATSFICKDILSSGLYYP 298

Query: 294 EKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYDFQKVVPPFHGNEVNAA- 352
           EK   NDWCK VKVE  +DYN++SATS+S  +L+ KS    YDF+  +PPF  N  + A 
Sbjct: 299 EKLGENDWCKRVKVEGKSDYNSISATSLSNRHLNVKSPLLPYDFEVQIPPFQENGTSTAP 358

Query: 353 TESIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFSIFDTPSTIQGLSRISESGYAHP 412
           T ++ S T+ +Y  ++GGP   + PLF   +L SE+F ++D  STIQGLS I +SG A  
Sbjct: 359 TVNMLSETTCQYSHNVGGPHIDTHPLFHQTTLSSEDFGVYDAASTIQGLSGIPDSGCALS 418

Query: 413 LLSSKSQNSPSPLSGIPVARPLVIGGSGGAHYNISQVSEKLIGVSSQASTSQASNKFSLS 472
           LLSS+SQ++ +  S + + R  ++  S  ++Y++S++SEKL+GVS QAS++  ++KF+  
Sbjct: 419 LLSSQSQSASNHPSIVHIPRAFIMSES-QSNYSMSELSEKLMGVSPQASSTGITSKFA-- 475

Query: 473 GNNSFEGSNLGSILMSDSSD-AANFDVSNRFYRGSDFMSSKDRLSCEDGATIDLLKLSSQ 531
             +    + +GSI    SSD    F +  R    S   + K  +S E   TIDLL+LSSQ
Sbjct: 476 --SGMSEAQMGSIPTCGSSDRTVTFQIPGRVLHRSGLANPKANISYERTPTIDLLQLSSQ 533

Query: 532 LQRVEHQNQFMQ 543
           LQRVEHQ   MQ
Sbjct: 534 LQRVEHQRHSMQ 545

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449522424|ref|XP_004168226.1| PREDICTED: squamosa promoter-binding-like protein 6-like [Cucumis sativus]

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 290/560 (51%), Positives = 353/560 (63%), Gaps = 66/560 (11%)

Query: 1   MEPWSYGSEGKGAVANDRISPADSSSRSKGYLMGWELNTSCH---NMLVSHREAPGNQSF 57
           ME WSY SEGKG ++++  SP  S +R+K  L+GWE    C     ML + ++   NQ F
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCSFGSTMLPTSQQV-DNQGF 59

Query: 58  GEFGFQEVVGKRLTKDNPIKDVLSSK---NHFMNPNMPTPTTSFGEDESTSKRSSSVVDS 114
           GE  F E++GK+L  DN + D+LSSK     F+NP M +     GEDESTSK SSS+VDS
Sbjct: 60  GELVFPEMIGKQL-PDNSVCDILSSKVVGGRFLNPAMNSSIAFLGEDESTSKLSSSIVDS 118

Query: 115 NSTLDSSLIDLNLGRFVDQRDSHTSKFSHGTPKFSSSKSSAAPKRVRLSGISSHTAYCQV 174
           +S  DSS IDL LGRF DQRD+H  KF  G P  SSS+SS   KRVR SG++S T +CQV
Sbjct: 119 SSR-DSSFIDLKLGRFADQRDAHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYFCQV 177

Query: 175 YGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRK 234
           YGCNKDLSS KDYHKRHKVCE HSK AKVIVN IEQRFCQQCSRFH L EFDDGKRSCRK
Sbjct: 178 YGCNKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRK 237

Query: 235 RLAGHNERRRKPQVGVHPGRTAKLLRSHEAFAGCKFQGTTLPMSSFICPDILPGGIFYPE 294
           RLAGHNERRRKPQV ++ GRT + L+S   + G + QGT L  +SFIC +ILP G+ +PE
Sbjct: 238 RLAGHNERRRKPQVAINSGRTGRFLQS---YNGSRLQGTALTATSFICQEILPNGLLHPE 294

Query: 295 KCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYDFQKVVPPFHGNEVNAATE 354
           K  T+DWC+ VK+ED N+Y  +SA  +  G+LH KS F  YD +  VPPFH N  NA+  
Sbjct: 295 KYGTSDWCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASAT 354

Query: 355 SIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFSIFDTPSTIQGLSRISESGYAHPLL 414
           +IF   S +YP  +GG  S S   F + SLGSE FS++   ST + LS +S+SG A  LL
Sbjct: 355 NIFKENSNQYPLSVGGVNSNSRSYFHNPSLGSEYFSVYSAASTDR-LSGLSDSGCALSLL 413

Query: 415 SSKSQNSPSPLSGIPVARPLVIGGSGGAHYNISQVSEKLIGVSSQASTSQASNKFSLSGN 474
           SS++QNS +  SGIP+ RPLV+   G  HY++SQ+SE                    S  
Sbjct: 414 SSQTQNSSTHSSGIPIGRPLVL-LDGQNHYSMSQLSE--------------------SSW 452

Query: 475 NSFEGSNLGSILMSDSSDAANFDVSNRFYRGSDFMSSKDRLSCEDGATIDLLKLSSQLQR 534
             F GSNL        +D                         E G TIDLL+LSSQLQR
Sbjct: 453 EIFHGSNL--------ADPG-----------------------EGGPTIDLLQLSSQLQR 481

Query: 535 VEHQNQFMQVKDENDSFCCL 554
           VEHQ Q MQV  +NDS   L
Sbjct: 482 VEHQRQAMQVP-KNDSLAKL 500

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564948|ref|XP_003550708.1| PREDICTED: uncharacterized protein LOC100812110 [Glycine max]

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 281/569 (49%), Positives = 367/569 (64%), Gaps = 39/569 (6%)

Query: 1   MEPWSYGSEGKGAVANDRISPADSSSRSKGYLMGWELNTSC---HNMLVSHREAPGNQSF 57
           ME WSY  E K  V+N+  SP ++  RSK   +GWEL T C    +ML     +  NQ F
Sbjct: 1   MESWSYIPEEKECVSNEAPSPPNTLGRSKNSFLGWELKTPCGFSTDMLGLGHHSIENQGF 60

Query: 58  GEFGFQEVVGKRLTKD----NPIKDVLSSKNHFMNPNMPTPTTSFGEDESTSKRSSSVVD 113
            E GF E++GK ++ D     P + V  ++                +   + + + +VVD
Sbjct: 61  EELGFPEMLGKHMSDDLVASVPTRKVDGNRQQ--------------QQHHSDRITGTVVD 106

Query: 114 SNSTLD-----SSLIDLNLGRFVDQRDSHTSKFSHGTPKFSSSKSSAAPKRVRLSGISSH 168
           + S        +SLIDL LGRF +  D     FS      SSS+SS  PKRVR SG+ S 
Sbjct: 107 APSGFSQRGDSNSLIDLKLGRFAEHGDFTDPAFSK---VLSSSESSTPPKRVRTSGLHSQ 163

Query: 169 TAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDG 228
           TAYCQVYGCNKDLSS KDYHKRHKVCE HSK A VIVN IEQRFCQQCSRFH L EFDDG
Sbjct: 164 TAYCQVYGCNKDLSSCKDYHKRHKVCEVHSKTAIVIVNGIEQRFCQQCSRFHLLAEFDDG 223

Query: 229 KRSCRKRLAGHNERRRKPQVGVHPGRTAKLLRSHEAFAGCKFQGTTLPMSSFICPDILPG 288
           KRSCRKRLAGHNERRRKPQ+G+HPG++  LL+ +      +FQG+ L  SSFI P++LP 
Sbjct: 224 KRSCRKRLAGHNERRRKPQMGIHPGKSGTLLQPYS-----RFQGSML-TSSFIRPEMLPS 277

Query: 289 GIFYPEKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYDFQKVVPPFHGNE 348
           G+   EK   +D+ + +K E    +  +S+ + + G+  P+S F  Y+  K  P  H N 
Sbjct: 278 GVMCSEKYGMSDFWRPIKAEHGTGFRNLSSMAATNGHPLPRSLFSSYN-GKQFPFLHENS 336

Query: 349 VNAATESIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFSIFDTPSTIQGLSRISESG 408
             + T SIF  +++ YP  LG   S   PLF+D ++G+E+FS+FDT   +QGLS IS+S 
Sbjct: 337 STSTTGSIFCESNSHYPSALGAQNSGLRPLFQD-TVGNEDFSVFDTSPNVQGLSGISDSC 395

Query: 409 YAHPLLSSKSQNSPSPLSGIPVARPLVIGGSGGAHYNISQVSEKLIGVSSQASTSQASNK 468
            A  LLSS+SQNS S  SGIP+A  LVI  S   HYN+SQVS+K IG+SSQ S+S+ S+ 
Sbjct: 396 CALSLLSSQSQNSSSQSSGIPLAHSLVIPSSHSHHYNMSQVSDK-IGISSQTSSSRVSDS 454

Query: 469 FSLSGNNSFEGSNLGSILMSDSSDAANFDVSNRFYRGSDFMSSKDRLSCEDGATIDLLKL 528
           F    N++ +GS+L  +L+S ++D  NFD+++  ++GSD+++ KDRLS EDGATIDLL+L
Sbjct: 455 FPPELNHA-DGSHLSPVLISGNNDIINFDMADGIFQGSDYLNVKDRLSDEDGATIDLLQL 513

Query: 529 SSQLQRVEHQNQFMQVKDENDSFCCLRIT 557
           SSQLQRVEH+ Q +QVK ENDS C LRIT
Sbjct: 514 SSQLQRVEHERQSLQVKQENDSSCTLRIT 542

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513469|ref|XP_003525436.1| PREDICTED: uncharacterized protein LOC100817547 [Glycine max]

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 283/574 (49%), Positives = 371/574 (64%), Gaps = 38/574 (6%)

Query: 1   MEPWSYGSEGKGAVANDRISPADSSSRSKGYLMGWELNTSC---HNMLVSHREAPGNQSF 57
           ME WSY  E K  V+N+ +SP ++  RSK   +GWEL T C   ++ML     +  NQ F
Sbjct: 1   MESWSYVPEEKECVSNEALSPPNTLGRSKNSFLGWELKTPCGFSNDMLGLGHHSIENQGF 60

Query: 58  GEFGFQEVVGKRLTKDNPIKDVLSSKNHFMNPNMPTPTTSFGEDESTSKR-SSSVVDSNS 116
            E GF E++GK ++ D             +  ++PT   +    +  S R + +VVD+ S
Sbjct: 61  EELGFPEMLGKHMSDD-------------LIGSVPTRKVNGNRQQQHSDRITGTVVDAPS 107

Query: 117 TLD------------SSLIDLNLGRFVDQRDSHTSKFSHGTPKFSSSKSSAAPKRVRLSG 164
                          +SLIDL LGRF D  D     FS      SSS+SS  PKRVR SG
Sbjct: 108 GFSQRGDSNSKLSNSNSLIDLKLGRFADHGDFTDRAFS---KVLSSSESSTPPKRVRASG 164

Query: 165 ISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDE 224
           + S TAYCQVYGCNKDLSS KDYHKRHKVCE HSK A VIVN IEQRFCQQCSRFH L E
Sbjct: 165 LHSQTAYCQVYGCNKDLSSCKDYHKRHKVCEVHSKTAIVIVNGIEQRFCQQCSRFHLLAE 224

Query: 225 FDDGKRSCRKRLAGHNERRRKPQVGVHPGRTAKLLRSHEA-FAGCKFQGTTLPMSSFICP 283
           FDDGKRSCRKRLAGHNERRRKPQ+G+HPG++ +LL+     +   +FQG+ L  SSFICP
Sbjct: 225 FDDGKRSCRKRLAGHNERRRKPQMGIHPGKSGRLLQPCGGNYTYSRFQGSML-TSSFICP 283

Query: 284 DILPGGIFYPEKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYDFQKVVPP 343
           ++LP G+   EK   +D+ + +K E    +  +S+ + + G+   +S FP Y+  +  P 
Sbjct: 284 EMLPSGVTCSEKYGMSDFWRPIKAEHGTGFRNLSSMAATNGHPPSRSLFPSYNGNQ-FPF 342

Query: 344 FHGNEVNAATESIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFSIFDTPSTIQGLSR 403
            H N   + T SIF  +++ YP  LG   S   PLF+D ++G+E F++FDT ST+QGLS 
Sbjct: 343 LHENSATSTTGSIFCESNSPYPSALGAQNSGLRPLFQD-TVGNENFNVFDTSSTVQGLSG 401

Query: 404 ISESGYAHPLLSSKSQNSPSPLSGIPVARPLVIGGSGGAHYNISQVSEKLIGVSSQASTS 463
           IS+S  A  LLSS+SQNS S  SGIP+A  LVI  S   +YN+SQVSEK IG+SSQ S+S
Sbjct: 402 ISDSCCALSLLSSQSQNSSSQSSGIPLAHSLVIPSSHSHNYNMSQVSEK-IGISSQTSSS 460

Query: 464 QASNKFSLSGNNSFEGSNLGSILMSDSSDAANFDVSNRFYRGSDFMSSKDRLSCEDGATI 523
           + S+ F    N++ +GS+L  +L+SD++   NFD+++  ++ SD+++ KD LS EDGATI
Sbjct: 461 RVSDSFPSELNHA-DGSHLSPVLISDNNCIVNFDMADGIFQASDYLNVKDHLSGEDGATI 519

Query: 524 DLLKLSSQLQRVEHQNQFMQVKDENDSFCCLRIT 557
           DLL+LSSQLQRVEH+ Q +QVK ENDS C LRIT
Sbjct: 520 DLLQLSSQLQRVEHERQSLQVKQENDSSCTLRIT 553

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359472829|ref|XP_002273534.2| PREDICTED: squamosa promoter-binding-like protein 6-like [Vitis vinifera]

 Score =  344 bits (882), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 234/570 (41%), Positives = 318/570 (55%), Gaps = 58/570 (10%)

Query: 1   MEPWSYGSEGKGAVANDRIS-PADSSSRSKGYLMGWELNTSCH---NMLVSHREAPGNQS 56
           ME WS+  E K  + ++ +    D+  RS+  L GW++ T  +   + LV  R+A  +  
Sbjct: 87  MESWSHALEKKMFLYSEEMDLTTDAVGRSRKLLTGWDMRTPFNFENDGLVLDRDAVESME 146

Query: 57  FGEFGFQEVVGKRLTKDNPIKDVLS------SKNHFMNP-NMPTPTTSFGEDESTSKRSS 109
           F E    ++V ++L   NP    LS      S    ++P NM T    FG +ES+S+ SS
Sbjct: 147 FMELDSPDLV-RKLLPSNPSVGFLSGEIGRNSSKRIVSPTNMVTSNPIFGGEESSSRLSS 205

Query: 110 SVVDSNSTLDSSLIDLNLGRFVDQRDSHTSKFSHGTPKFSSSKSSAAPKRVRLSGISSHT 169
           S ++SNS  DSS+IDL LGR  D  D+  ++ S      SS  SS   KR R + + S T
Sbjct: 206 SFMESNSQ-DSSIIDLKLGRLADCIDAKNNRCSKEGSVLSSLASSMPAKRARTTSVCSQT 264

Query: 170 AYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGK 229
             CQV+GCN DLSSSKDYHKRHKVC+ HSK  KVIVN IEQRFCQQCSRFH L EFDDGK
Sbjct: 265 PLCQVHGCNMDLSSSKDYHKRHKVCDVHSKTPKVIVNGIEQRFCQQCSRFHLLAEFDDGK 324

Query: 230 RSCRKRLAGHNERRRKPQVGVHPGRTAKLLRSHEAFAGCKFQGTTLP-MSSFICPDILPG 288
           RSCRKRLAGHNERRRKPQ+  H G+  KLL+S   + G +  GT+L     F+  DILPG
Sbjct: 325 RSCRKRLAGHNERRRKPQLDTHSGKPQKLLQS---YPGTRILGTSLAKRPPFVFQDILPG 381

Query: 289 GIFYPEKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYDFQKVVPPFHGNE 348
            ++ P+     +  + +K+E    Y++     IS G L PKSF   Y  ++  PP     
Sbjct: 382 SVYCPDGYGQANPSRSIKLEKEPIYSSQLVIPIS-GQLPPKSFLHLYGTERQCPPGF--- 437

Query: 349 VNAATESIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFSIFDTPSTIQGLSRISESG 408
                                            +S G+E+ + F   ST+Q L  +S+S 
Sbjct: 438 ---------------------------------LSSGTEDCTGFYPASTVQELPGVSKSN 464

Query: 409 YAHPLLSSKSQNSPSPLSGIPVARPLVIGGSGGAHYNISQVSEKLIGVSSQASTSQASNK 468
            A  LLS++SQ+  + L GIP+A P  + G   AHY+    S+K IG+SS      ASN 
Sbjct: 465 CALSLLSAQSQDLSNHLMGIPMANPPTVQGC-HAHYSAVHNSDKPIGMSSLEKF--ASNG 521

Query: 469 FSLSGNNSFEGSNLGSILMSDSSDAANFDV-SNRFYRGSDFMSSKDRLSCEDGATIDLLK 527
              S  NS E + +G +++ D  +A +F+V +NR ++GSDF+++K   S E   T+DLL+
Sbjct: 522 SYSSRMNSVEVAQMGPVMLPDGGNAVSFEVRTNRNFQGSDFLNAKYSHSSEREPTVDLLQ 581

Query: 528 LSSQLQRVEHQNQFMQVKDENDSFCCLRIT 557
           LSS L+RVE Q  +M VK END F C   T
Sbjct: 582 LSSHLKRVEWQRNYMHVKQENDDFHCFPTT 611

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738116|emb|CBI27317.3| unnamed protein product [Vitis vinifera]

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 221/522 (42%), Positives = 294/522 (56%), Gaps = 54/522 (10%)

Query: 45  LVSHREAPGNQSFGEFGFQEVVGKRLTKDNPIKDVLS------SKNHFMNP-NMPTPTTS 97
           LV  R+A  +  F E    ++V ++L   NP    LS      S    ++P NM T    
Sbjct: 22  LVLDRDAVESMEFMELDSPDLV-RKLLPSNPSVGFLSGEIGRNSSKRIVSPTNMVTSNPI 80

Query: 98  FGEDESTSKRSSSVVDSNSTLDSSLIDLNLGRFVDQRDSHTSKFSHGTPKFSSSKSSAAP 157
           FG +ES+S+ SSS ++SNS  DSS+IDL LGR  D  D+  ++ S      SS  SS   
Sbjct: 81  FGGEESSSRLSSSFMESNSQ-DSSIIDLKLGRLADCIDAKNNRCSKEGSVLSSLASSMPA 139

Query: 158 KRVRLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCS 217
           KR R + + S T  CQV+GCN DLSSSKDYHKRHKVC+ HSK  KVIVN IEQRFCQQCS
Sbjct: 140 KRARTTSVCSQTPLCQVHGCNMDLSSSKDYHKRHKVCDVHSKTPKVIVNGIEQRFCQQCS 199

Query: 218 RFHFLDEFDDGKRSCRKRLAGHNERRRKPQVGVHPGRTAKLLRSHEAFAGCKFQGTTLP- 276
           RFH L EFDDGKRSCRKRLAGHNERRRKPQ+  H G+  KLL+S   + G +  GT+L  
Sbjct: 200 RFHLLAEFDDGKRSCRKRLAGHNERRRKPQLDTHSGKPQKLLQS---YPGTRILGTSLAK 256

Query: 277 MSSFICPDILPGGIFYPEKCRTNDWCKCVKVEDMNDYNAVSATSISKGNLHPKSFFPQYD 336
              F+  DILPG ++ P+     +  + +K+E    Y++     IS G L PKSF   Y 
Sbjct: 257 RPPFVFQDILPGSVYCPDGYGQANPSRSIKLEKEPIYSSQLVIPIS-GQLPPKSFLHLYG 315

Query: 337 FQKVVPPFHGNEVNAATESIFSATSARYPQDLGGPKSVSSPLFRDISLGSEEFSIFDTPS 396
            ++  PP                                      +S G+E+ + F   S
Sbjct: 316 TERQCPPGF------------------------------------LSSGTEDCTGFYPAS 339

Query: 397 TIQGLSRISESGYAHPLLSSKSQNSPSPLSGIPVARPLVIGGSGGAHYNISQVSEKLIGV 456
           T+Q L  +S+S  A  LLS++SQ+  + L GIP+A P  + G   AHY+    S+K IG+
Sbjct: 340 TVQELPGVSKSNCALSLLSAQSQDLSNHLMGIPMANPPTVQGC-HAHYSAVHNSDKPIGM 398

Query: 457 SSQASTSQASNKFSLSGNNSFEGSNLGSILMSDSSDAANFDV-SNRFYRGSDFMSSKDRL 515
           SS      ASN    S  NS E + +G +++ D  +A +F+V +NR ++GSDF+++K   
Sbjct: 399 SSLEKF--ASNGSYSSRMNSVEVAQMGPVMLPDGGNAVSFEVRTNRNFQGSDFLNAKYSH 456

Query: 516 SCEDGATIDLLKLSSQLQRVEHQNQFMQVKDENDSFCCLRIT 557
           S E   T+DLL+LSS L+RVE Q  +M VK END F C   T
Sbjct: 457 SSEREPTVDLLQLSSHLKRVEWQRNYMHVKQENDDFHCFPTT 498

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	557
TAIR|locus:2026428	405	AT1G69170 [Arabidopsis thalian	0.229	0.316	0.643	4.1e-52
TAIR|locus:2159717	359	SPL13A "SQUAMOSA PROMOTER-BIND	0.258	0.401	0.445	2.4e-31
TAIR|locus:2832472	359	SPL13B "SQUAMOSA PROMOTER-BIND	0.258	0.401	0.445	2.4e-31
TAIR|locus:2016014	396	SPL10 "squamosa promoter bindi	0.184	0.260	0.566	1.2e-28
TAIR|locus:2169248	419	SPL2 "squamosa promoter bindin	0.149	0.198	0.655	1.2e-28
TAIR|locus:504956101	333	SPL8 "squamosa promoter bindin	0.143	0.240	0.687	1.3e-26
TAIR|locus:2015999	393	SPL11 "squamosa promoter-like	0.159	0.226	0.633	1.3e-26
TAIR|locus:2095793	354	SPL15 "squamosa promoter bindi	0.159	0.251	0.674	2.2e-26
TAIR|locus:2059974	375	SPL9 "squamosa promoter bindin	0.152	0.226	0.670	3.7e-26
TAIR|locus:2057656	131	SPL3 "squamosa promoter bindin	0.143	0.610	0.637	1.7e-25

TAIR|locus:2026428 AT1G69170 [Arabidopsis thaliana (taxid:3702)]

 Score = 446 (162.1 bits), Expect = 4.1e-52, Sum P(3) = 4.1e-52
 Identities = 85/132 (64%), Positives = 97/132 (73%)

Query:   161 RLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFH 220
             R S + S    CQVYGC+KDLSSSKDYHKRH+VCEAHSK + VIVN +EQRFCQQCSRFH
Sbjct:   113 RASNLCSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFH 172

Query:   221 FLDEFDDGKRSCRKRLAGHNERRRKPQVGVHPGRTAKLLRSHEAFAGCKFQGTTLPMSSF 280
             FL EFDDGKRSCR+RLAGHNERRRKP     PG+  KLLR+ +   G KF    L  SS 
Sbjct:   173 FLSEFDDGKRSCRRRLAGHNERRRKPAFYFLPGKRHKLLRTSQDVVGNKF----LENSSL 228

Query:   281 ICPDILPGGIFY 292
             + P+  PG + Y
Sbjct:   229 VLPESFPGSLLY 240

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2159717 SPL13A "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13A" [Arabidopsis thaliana (taxid:3702)]

 Score = 323 (118.8 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
 Identities = 66/148 (44%), Positives = 85/148 (57%)

Query:   139 SKFSHGTXXXXXXXXXXXXXRVRLSGISSHTA-YCQVYGCNKDLSSSKDYHKRHKVCEAH 197
             SK+                 R R +G+ ++    C V GC+ D S+ ++YHKRHKVC+ H
Sbjct:    67 SKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVH 126

Query:   198 SKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRKRLAGHNERRRKPQVGVHPGRTAK 257
             SK   V +N  +QRFCQQCSRFH L+EFD+GKRSCRKRL GHN RRRKPQ   H GR A 
Sbjct:   127 SKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPE-HIGRPAN 185

Query:   258 LLRSHEAFAGCKFQGTT--LPMSSFICP 283
                  +     +F G +   P +S + P
Sbjct:   186 FFTGFQGSKLLEFSGGSHVFPTTSVLNP 213

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0048653 "anther development" evidence=IMP

TAIR|locus:2832472 SPL13B "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13B" [Arabidopsis thaliana (taxid:3702)]

 Score = 323 (118.8 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
 Identities = 66/148 (44%), Positives = 85/148 (57%)

Query:   139 SKFSHGTXXXXXXXXXXXXXRVRLSGISSHTA-YCQVYGCNKDLSSSKDYHKRHKVCEAH 197
             SK+                 R R +G+ ++    C V GC+ D S+ ++YHKRHKVC+ H
Sbjct:    67 SKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVH 126

Query:   198 SKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRKRLAGHNERRRKPQVGVHPGRTAK 257
             SK   V +N  +QRFCQQCSRFH L+EFD+GKRSCRKRL GHN RRRKPQ   H GR A 
Sbjct:   127 SKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPE-HIGRPAN 185

Query:   258 LLRSHEAFAGCKFQGTT--LPMSSFICP 283
                  +     +F G +   P +S + P
Sbjct:   186 FFTGFQGSKLLEFSGGSHVFPTTSVLNP 213

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0048653 "anther development" evidence=IMP

TAIR|locus:2016014 SPL10 "squamosa promoter binding protein-like 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 60/106 (56%), Positives = 76/106 (71%)

Query:   159 RVRLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSR 218
             + +  G S     CQ+ GC  DLSSSKDYH++H+VCE HSK  KV+V+ +E+RFCQQCSR
Sbjct:   163 KTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSR 222

Query:   219 FHFLDEFDDGKRSCRKRLAGHNERRRKPQVGVHPGRTAKLL--RSH 262
             FH + EFD+ KRSCRKRL+ HN RRRKPQ GV P  + ++   R H
Sbjct:   223 FHAVSEFDEKKRSCRKRLSHHNARRRKPQ-GVFPLNSERVFDRRQH 267

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010358 "leaf shaping" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

TAIR|locus:2169248 SPL2 "squamosa promoter binding protein-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 57/87 (65%), Positives = 71/87 (81%)

Query:   169 TAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDG 228
             T +CQV GCN DLSS+KDYH++H++CE HSK  KV+V+ +E+RFCQQCSRFH L EFD+ 
Sbjct:   166 TPHCQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEK 225

Query:   229 KRSCRKRLAGHNERRRKPQVGVHPGRT 255
             KRSCR+RL+ HN RRRKP    +PGRT
Sbjct:   226 KRSCRRRLSDHNARRRKP----NPGRT 248

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048653 "anther development" evidence=IGI

TAIR|locus:504956101 SPL8 "squamosa promoter binding protein-like 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 1.3e-26, P = 1.3e-26
 Identities = 55/80 (68%), Positives = 61/80 (76%)

Query:   166 SSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEF 225
             S  T  CQ  GCN DLS +K YH+RHKVCE HSKA+ V+   + QRFCQQCSRFH L EF
Sbjct:   182 SLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFHLLSEF 241

Query:   226 DDGKRSCRKRLAGHNERRRK 245
             D+GKRSCRKRLA HN RRRK
Sbjct:   242 DNGKRSCRKRLADHNRRRRK 261

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0009554 "megasporogenesis" evidence=IMP

GO:0009556 "microsporogenesis" evidence=IMP

GO:0048653 "anther development" evidence=IGI

TAIR|locus:2015999 SPL11 "squamosa promoter-like 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 1.3e-26, P = 1.3e-26
 Identities = 57/90 (63%), Positives = 68/90 (75%)

Query:   161 RLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFH 220
             +L G S     CQ+ GC  DLSS+K YH++HKVCE HSK  KV V+ +E+RFCQQCSRFH
Sbjct:   164 KLCGQSMPVPRCQIDGCELDLSSAKGYHRKHKVCEKHSKCPKVSVSGLERRFCQQCSRFH 223

Query:   221 FLDEFDDGKRSCRKRLAGHNERRRKPQVGV 250
              + EFD+ KRSCRKRL+ HN RRRKPQ GV
Sbjct:   224 AVSEFDEKKRSCRKRLSHHNARRRKPQ-GV 252

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

TAIR|locus:2095793 SPL15 "squamosa promoter binding protein-like 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 302 (111.4 bits), Expect = 2.2e-26, P = 2.2e-26
 Identities = 60/89 (67%), Positives = 67/89 (75%)

Query:   159 RVRLSGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSR 218
             RV     SS TA CQV GC  DLS+ K Y+ RHKVC  HSK++KVIV+ + QRFCQQCSR
Sbjct:    46 RVNTVRKSSTTARCQVEGCRMDLSNVKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQQCSR 105

Query:   219 FHFLDEFDDGKRSCRKRLAGHNERRRKPQ 247
             FH L EFD  KRSCR+RLA HNERRRKPQ
Sbjct:   106 FHQLSEFDLEKRSCRRRLACHNERRRKPQ 134

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IGI

GO:0008361 "regulation of cell size" evidence=IMP

GO:0042127 "regulation of cell proliferation" evidence=IMP

GO:0048653 "anther development" evidence=IGI

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2059974 SPL9 "squamosa promoter binding protein-like 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 300 (110.7 bits), Expect = 3.7e-26, P = 3.7e-26
 Identities = 57/85 (67%), Positives = 63/85 (74%)

Query:   163 SGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFL 222
             SG S     CQV GC  DL+++K Y+ RH+VC  HSK  KV V  IEQRFCQQCSRFH L
Sbjct:    65 SGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQL 124

Query:   223 DEFDDGKRSCRKRLAGHNERRRKPQ 247
              EFD  KRSCR+RLAGHNERRRKPQ
Sbjct:   125 PEFDLEKRSCRRRLAGHNERRRKPQ 149

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IGI

GO:0048366 "leaf development" evidence=IMP;IDA

GO:2000025 "regulation of leaf formation" evidence=IMP

GO:0048653 "anther development" evidence=IGI

TAIR|locus:2057656 SPL3 "squamosa promoter binding protein-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 1.7e-25, P = 1.7e-25
 Identities = 51/80 (63%), Positives = 62/80 (77%)

Query:   166 SSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEF 225
             +S +  CQV  C  D+S +K YHKRHKVC+ H+KA  V ++ + QRFCQQCSRFH L EF
Sbjct:    48 TSSSGVCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEF 107

Query:   226 DDGKRSCRKRLAGHNERRRK 245
             D+ KRSCR+RLAGHNERRRK
Sbjct:   108 DEAKRSCRRRLAGHNERRRK 127

GO:0003677 "DNA binding" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;TAS

GO:0010321 "regulation of vegetative phase change" evidence=IMP

GO:0010229 "inflorescence development" evidence=IMP

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IMP

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0009886 "post-embryonic morphogenesis" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

GO:0048507 "meristem development" evidence=RCA

GO:0009908 "flower development" evidence=TAS

GO:0009911 "positive regulation of flower development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_X001404 hypothetical protein (600 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	557
pfam03110	79	pfam03110, SBP, SBP domain	3e-50

>gnl|CDD|190527 pfam03110, SBP, SBP domain

 Score =  167 bits (424), Expect = 3e-50
 Identities = 59/77 (76%), Positives = 67/77 (87%)

Query: 172 CQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRS 231
           CQV GC  DLS++KDYH+RHKVCE HSKA  V+V+ +EQRFCQQCSRFH L EFD+GKRS
Sbjct: 2   CQVEGCGADLSNAKDYHRRHKVCEVHSKAPVVLVSGLEQRFCQQCSRFHLLSEFDEGKRS 61

Query: 232 CRKRLAGHNERRRKPQV 248
           CR+RLAGHNERRRKPQ 
Sbjct: 62  CRRRLAGHNERRRKPQP 78

SBP domains (for SQUAMOSA-pROMOTER BINDING PROTEIN) are found in plant proteins. It is a sequence specific DNA-binding domain. Members of family probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands. Length = 79

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	557
PF03110	79	SBP: SBP domain; InterPro: IPR004333 The SBP plant	100.0

>PF03110 SBP: SBP domain; InterPro: IPR004333 The SBP plant protein domain is a sequence specific DNA-binding domain []

Probab=100.00  E-value=1.1e-37  Score=261.83  Aligned_cols=78  Identities=65%  Similarity=1.149  Sum_probs=63.2

Q ss_pred             CcccCCCchhccCChhhhccccchhhhcCCCeEEECCceehhhhhhccccccCccccccchHHHHHhhHhhhhcCCCC
Q 008680          171 YCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRKRLAGHNERRRKPQV  248 (557)
Q Consensus       171 ~CQVdGC~~dLs~~k~Y~rRhrVCe~HsKAp~V~v~G~~qRFCQQCsRFH~L~EFDg~kRSCR~rL~~Hn~RRRk~q~  248 (557)
                      +||||||++||+.+|.||+||||||.|+|||+|+++|.++||||||+|||+|+||||.|||||++|++||+||||+++
T Consensus         1 ~CqV~gC~~dL~~~k~Y~rR~rICe~H~ka~~V~~~G~~~RFCQQC~rfh~l~eFdg~kRSCr~~L~~h~~RRr~~~~   78 (79)
T PF03110_consen    1 RCQVDGCGADLSGAKEYHRRYRICEEHAKAPVVVVDGVEQRFCQQCGRFHPLSEFDGGKRSCRARLARHNERRRKRQQ   78 (79)
T ss_dssp             C-SSTTEE-EETS--SSCCCTT--HHHHTHSEEEETTEEEEE-TTTSSEEETTCB-SSTTSBSTTTT-SSS---S-S-
T ss_pred             CCcCCCCCcchhhhHHHhhccCcchhhcCCCeEEECChhHHHHHHHHcCCCHHHHcchhhhHHHHHHHHHHHhccccC
Confidence            599999999999999999999999999999999999999999999999999999999999999999999999999875

Proteins with this domain probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands.; GO: 0003677 DNA binding, 0005634 nucleus; PDB: 1UL4_A 1WJ0_A 1UL5_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	557
1ul4_A	94	Solution Structure Of The Dna-Binding Domain Of Squ		2e-24
1wj0_A	60	Solution Structure Of The Dna-Binding Domain Of Squ		4e-17
1ul5_A	88	Solution Structure Of The Dna-binding Domain Of Squ		6e-17

>pdb|1UL4|A Chain A, Solution Structure Of The Dna-Binding Domain Of Squamosa Promoter Binding Protein-Like 4 Length = 94

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/80 (63%), Positives = 61/80 (76%)
Query: 166 SSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEF 225
           SS    CQV  C  D+  +K YH+RHKVCE H+KA+ V ++ + QRFCQQCSRFH L EF
Sbjct: 5   SSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEF 64
Query: 226 DDGKRSCRKRLAGHNERRRK 245
           D+ KRSCR+RLAGHNERRRK
Sbjct: 65  DEAKRSCRRRLAGHNERRRK 84

>pdb|1WJ0|A Chain A, Solution Structure Of The Dna-Binding Domain Of Squamosa Promoter Binding Protein-Like 12 Lacking The Second Zinc- Binding Site Length = 60

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/55 (69%), Positives = 41/55 (74%)
Query: 172 CQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFD 226
           CQV  C  DLS  KDYH+RHKVCE HSKA   +V  I QRFCQQCSRFH L+EFD
Sbjct: 6   CQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60

>pdb|1UL5|A Chain A, Solution Structure Of The Dna-binding Domain Of Squamosa Promoter Binding Protein-like 7 Length = 88

Iteration: 1
 Score = 85.5 bits (210), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 55/80 (68%)
Query: 169 TAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDG 228
            A CQV  C  D+S  K YHKRH+VC   + A+ V+++   +R+CQQC +FH L +FD+G
Sbjct: 3   VARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEG 62
Query: 229 KRSCRKRLAGHNERRRKPQV 248
           KRSCR++L  HN RR++  V
Sbjct: 63  KRSCRRKLERHNNRRKRKPV 82

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	557
1ul4_A	94	SPL4, squamosa promoter binding protein-like 4; tr	7e-37
1ul5_A	88	SPL7, squamosa promoter binding protein-like 7; tr	1e-35
1wj0_A	60	Squamosa promoter-binding protein-like 12; DNA-bin	3e-29

>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 94

 Score =  130 bits (329), Expect = 7e-37
 Identities = 53/92 (57%), Positives = 63/92 (68%)

Query: 163 SGISSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFL 222
           S  SS    CQV  C  D+  +K YH+RHKVCE H+KA+ V ++ + QRFCQQCSRFH L
Sbjct: 2   SSGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDL 61

Query: 223 DEFDDGKRSCRKRLAGHNERRRKPQVGVHPGR 254
            EFD+ KRSCR+RLAGHNERRRK      P  
Sbjct: 62  QEFDEAKRSCRRRLAGHNERRRKSSGESGPSS 93

>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 88

 Score =  127 bits (320), Expect = 1e-35
 Identities = 38/80 (47%), Positives = 54/80 (67%)

Query: 168 HTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDD 227
             A CQV  C  D+S  K YHKRH+VC   + A+ V+++   +R+CQQC +FH L +FD+
Sbjct: 2   SVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDE 61

Query: 228 GKRSCRKRLAGHNERRRKPQ 247
           GKRSCR++L  HN RR++  
Sbjct: 62  GKRSCRRKLERHNNRRKRKP 81

>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 60

 Score =  108 bits (272), Expect = 3e-29
 Identities = 38/59 (64%), Positives = 41/59 (69%)

Query: 168 HTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFD 226
               CQV  C  DLS  KDYH+RHKVCE HSKA   +V  I QRFCQQCSRFH L+EFD
Sbjct: 2   SAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	557
1ul4_A	94	SPL4, squamosa promoter binding protein-like 4; tr	100.0
1ul5_A	88	SPL7, squamosa promoter binding protein-like 7; tr	100.0
1wj0_A	60	Squamosa promoter-binding protein-like 12; DNA-bin	99.96

>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1

Probab=100.00  E-value=1.2e-40  Score=286.13  Aligned_cols=87  Identities=60%  Similarity=1.027  Sum_probs=80.3

Q ss_pred             CCCCCCcccCCCchhccCChhhhccccchhhhcCCCeEEECCceehhhhhhccccccCccccccchHHHHHhhHhhhhcC
Q 008680          166 SSHTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRKRLAGHNERRRK  245 (557)
Q Consensus       166 ~~~~~~CQVdGC~~dLs~~k~Y~rRhrVCe~HsKAp~V~v~G~~qRFCQQCsRFH~L~EFDg~kRSCR~rL~~Hn~RRRk  245 (557)
                      .++.++||||||++||+.+|+||+||||||.|+|||+|+|+|+++||||||+|||+|+|||+.|||||+||++||+||||
T Consensus         5 ~~~~~~CqV~GC~~dL~~~k~Y~rR~rvCe~H~ka~~V~~~G~~~RFCQQCsrFH~L~eFD~~kRSCR~rL~~hn~RRRk   84 (94)
T 1ul4_A            5 SSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRK   84 (94)
T ss_dssp             ---CCCCSSTTCCCCCTTCCHHHHHTTCCHHHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCCCCS
T ss_pred             CCCCCceecCCCCcchhhHHHHHHhhhhhHHHhcCCEEEECChhHHHHHHHhccCCHHHhccccchHHHHHHHHHHHhcc
Confidence            45788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC
Q 008680          246 PQVGVHP  252 (557)
Q Consensus       246 ~q~~~~~  252 (557)
                      ++++..+
T Consensus        85 ~~~~~~~   91 (94)
T 1ul4_A           85 SSGESGP   91 (94)
T ss_dssp             CCCC---
T ss_pred             CCCCcCC
Confidence            9998754

>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1

Probab=100.00  E-value=1.7e-39  Score=276.27  Aligned_cols=82  Identities=48%  Similarity=0.951  Sum_probs=78.8

Q ss_pred             CCCcccCCCchhccCChhhhccccchhhhcCCCeEEECCceehhhhhhccccccCccccccchHHHHHhhHhhhhcCCCC
Q 008680          169 TAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRKRLAGHNERRRKPQV  248 (557)
Q Consensus       169 ~~~CQVdGC~~dLs~~k~Y~rRhrVCe~HsKAp~V~v~G~~qRFCQQCsRFH~L~EFDg~kRSCR~rL~~Hn~RRRk~q~  248 (557)
                      .++||||||++||+.+|+||+||||||.|+|||+|+|+|+++||||||+|||+|+|||+.|||||+||++||+||||++.
T Consensus         3 ~~~CqV~GC~~dLs~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFD~~kRSCR~rL~~hn~RRR~~~~   82 (88)
T 1ul5_A            3 VARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKPV   82 (88)
T ss_dssp             CCSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCSC
T ss_pred             CCeeecCCCCCChhHhhHHHhhccccHHHcCCCEEEECCEeeHHHHHhccccChhhhccccchHHHHHHHHHHHhccCCc
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999988776


Q ss_pred             CC
Q 008680          249 GV  250 (557)
Q Consensus       249 ~~  250 (557)
                      +.
T Consensus        83 ~~   84 (88)
T 1ul5_A           83 DK   84 (88)
T ss_dssp             SS
T ss_pred             cC
Confidence            64

>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1

Probab=99.96  E-value=1.5e-30  Score=207.94  Aligned_cols=59  Identities=64%  Similarity=1.123  Sum_probs=57.1

Q ss_pred             CCCCcccCCCchhccCChhhhccccchhhhcCCCeEEECCceehhhhhhccccccCccc
Q 008680          168 HTAYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFD  226 (557)
Q Consensus       168 ~~~~CQVdGC~~dLs~~k~Y~rRhrVCe~HsKAp~V~v~G~~qRFCQQCsRFH~L~EFD  226 (557)
                      +.++|||+||++||+.+|+|||||||||.|+|||+|+++|+++||||||+|||+|+|||
T Consensus         2 ~~~~CqV~gC~~dl~~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQCsrFH~L~eFD   60 (60)
T 1wj0_A            2 SAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD   60 (60)
T ss_dssp             -CEECSSTTCCCEETSCCSSTTTTTCCHHHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred             CCceeecCCCCcChhHhHHHhhccccChhHcCCCEEEECCEEEehhhhccCccCcccCC
Confidence            46789999999999999999999999999999999999999999999999999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	557
d1ul5a_	86	g.72.1.1 (A:) Squamosa promoter binding protein-li	1e-42
d1ul4a_	81	g.72.1.1 (A:) Squamosa promoter binding protein-li	8e-42
d1wj0a_	58	g.72.1.1 (A:) Squamosa-promoter binding-like prote	7e-29

>d1ul5a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 7, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 86

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 7, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  144 bits (366), Expect = 1e-42
 Identities = 39/82 (47%), Positives = 55/82 (67%)

Query: 170 AYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGK 229
           A CQV  C  D+S  K YHKRH+VC   + A+ V+++   +R+CQQC +FH L +FD+GK
Sbjct: 2   ARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGK 61

Query: 230 RSCRKRLAGHNERRRKPQVGVH 251
           RSCR++L  HN RR++  V   
Sbjct: 62  RSCRRKLERHNNRRKRKPVDKG 83

>d1ul4a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 4, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 81

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 4, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  142 bits (360), Expect = 8e-42
 Identities = 49/76 (64%), Positives = 59/76 (77%)

Query: 172 CQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRS 231
           CQV  C  D+  +K YH+RHKVCE H+KA+ V ++ + QRFCQQCSRFH L EFD+ KRS
Sbjct: 4   CQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRS 63

Query: 232 CRKRLAGHNERRRKPQ 247
           CR+RLAGHNERRRK  
Sbjct: 64  CRRRLAGHNERRRKSS 79

>d1wj0a_ g.72.1.1 (A:) Squamosa-promoter binding-like protein 12, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 58

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa-promoter binding-like protein 12, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  106 bits (266), Expect = 7e-29
 Identities = 38/55 (69%), Positives = 41/55 (74%)

Query: 172 CQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFD 226
           CQV  C  DLS  KDYH+RHKVCE HSKA   +V  I QRFCQQCSRFH L+EFD
Sbjct: 4   CQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 58

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	557
d1ul4a_	81	Squamosa promoter binding protein-like 4, DNA-bind	100.0
d1ul5a_	86	Squamosa promoter binding protein-like 7, DNA-bind	100.0
d1wj0a_	58	Squamosa-promoter binding-like protein 12, DNA-bin	99.96

>d1ul4a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 4, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 4, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7.2e-40  Score=272.88  Aligned_cols=80  Identities=61%  Similarity=1.088  Sum_probs=78.1

Q ss_pred             CCcccCCCchhccCChhhhccccchhhhcCCCeEEECCceehhhhhhccccccCccccccchHHHHHhhHhhhhcCCCCC
Q 008680          170 AYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRKRLAGHNERRRKPQVG  249 (557)
Q Consensus       170 ~~CQVdGC~~dLs~~k~Y~rRhrVCe~HsKAp~V~v~G~~qRFCQQCsRFH~L~EFDg~kRSCR~rL~~Hn~RRRk~q~~  249 (557)
                      ..||||||++||+.+|+||+||||||.|+|||+|+|+|+++||||||+|||+|+|||++|||||+||++||+||||++++
T Consensus         2 ~~CqVdgC~~dls~~k~YhrRhrvCe~H~ka~~V~v~G~~~RfCQqC~rFH~L~eFD~~krSCr~rL~~hn~RRRk~~~~   81 (81)
T d1ul4a_           2 RLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGE   81 (81)
T ss_dssp             CCCSSTTCCCCCTTCCHHHHHTTCCHHHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCCCCSCCCC
T ss_pred             CeeeeCCCcchHHhhHHhhhhhHHHHHHcCCCeEEECCeechHHHHhcccccHHHhccccccHHHHHHHHhHHhccCCCC
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999875

>d1ul5a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 7, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 7, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.6e-40  Score=276.05  Aligned_cols=83  Identities=47%  Similarity=0.928  Sum_probs=80.8

Q ss_pred             CCcccCCCchhccCChhhhccccchhhhcCCCeEEECCceehhhhhhccccccCccccccchHHHHHhhHhhhhcCCCCC
Q 008680          170 AYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFDDGKRSCRKRLAGHNERRRKPQVG  249 (557)
Q Consensus       170 ~~CQVdGC~~dLs~~k~Y~rRhrVCe~HsKAp~V~v~G~~qRFCQQCsRFH~L~EFDg~kRSCR~rL~~Hn~RRRk~q~~  249 (557)
                      ++||||||++||+.+|+||+||||||.|+|||+|+|+|+++||||||+|||+|+|||++|||||+||++||+||||++++
T Consensus         2 ~rCqV~gC~~dls~~k~Y~rRhrvCe~H~ka~~V~v~G~~~RfCQqC~rFH~L~eFD~~krSCr~rL~~hn~RRRk~~~~   81 (86)
T d1ul5a_           2 ARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKPVD   81 (86)
T ss_dssp             CSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCSCS
T ss_pred             CeeeeCCCcchhhhCHHhhhhhHHHHHhcCCCeEEECCeechHHHHhccccChhhhccccccHHHHHHHHHHHhccCCcc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCC
Q 008680          250 VHP  252 (557)
Q Consensus       250 ~~~  252 (557)
                      .++
T Consensus        82 ~~g   84 (86)
T d1ul5a_          82 KGG   84 (86)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            754

>d1wj0a_ g.72.1.1 (A:) Squamosa-promoter binding-like protein 12, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa-promoter binding-like protein 12, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=1.3e-30  Score=205.29  Aligned_cols=57  Identities=67%  Similarity=1.160  Sum_probs=55.9

Q ss_pred             CCcccCCCchhccCChhhhccccchhhhcCCCeEEECCceehhhhhhccccccCccc
Q 008680          170 AYCQVYGCNKDLSSSKDYHKRHKVCEAHSKAAKVIVNEIEQRFCQQCSRFHFLDEFD  226 (557)
Q Consensus       170 ~~CQVdGC~~dLs~~k~Y~rRhrVCe~HsKAp~V~v~G~~qRFCQQCsRFH~L~EFD  226 (557)
                      ..||||||++||+.+|+|||||||||.|+|||+|+|+|++|||||||+|||+|+|||
T Consensus         2 ~~CqV~gC~~dl~~~k~YhrRhkvCe~H~ka~~V~v~G~~~RFCQQCsrFH~L~eFD   58 (58)
T d1wj0a_           2 ICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD   58 (58)
T ss_dssp             EECSSTTCCCEETSCCSSTTTTTCCHHHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred             ceeEeCCcchhhhhhHHhcchhhHHHHhcCCCeEEECCcccccccccCCcccccccC
Confidence            369999999999999999999999999999999999999999999999999999998