Citrus Sinensis ID: 008686
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 557 | 2.2.26 [Sep-21-2011] | |||||||
| Q43866 | 584 | Beta-fructofuranosidase, | yes | no | 0.971 | 0.926 | 0.582 | 0.0 | |
| Q67XZ3 | 594 | Beta-fructofuranosidase, | no | no | 0.976 | 0.915 | 0.559 | 0.0 | |
| Q70XE6 | 606 | Fructan 6-exohydrolase OS | N/A | no | 0.917 | 0.843 | 0.605 | 0.0 | |
| Q43089 | 555 | Beta-fructofuranosidase, | N/A | no | 0.946 | 0.949 | 0.584 | 0.0 | |
| Q9LIB9 | 572 | Beta-fructofuranosidase, | no | no | 0.973 | 0.947 | 0.545 | 0.0 | |
| P26792 | 592 | Beta-fructofuranosidase, | N/A | no | 0.947 | 0.891 | 0.541 | 1e-176 | |
| Q39693 | 583 | Beta-fructofuranosidase, | N/A | no | 0.953 | 0.910 | 0.513 | 1e-164 | |
| Q39692 | 592 | Beta-fructofuranosidase, | N/A | no | 0.980 | 0.922 | 0.494 | 1e-164 | |
| Q0JDC6 | 586 | Beta-fructofuranosidase, | yes | no | 0.933 | 0.887 | 0.492 | 1e-160 | |
| Q01IS8 | 586 | Beta-fructofuranosidase, | N/A | no | 0.933 | 0.887 | 0.492 | 1e-160 |
| >sp|Q43866|INV1_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV1 OS=Arabidopsis thaliana GN=CWINV1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/567 (58%), Positives = 422/567 (74%), Gaps = 26/567 (4%)
Query: 16 LGHVFVKLEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYH 75
+G+ V LEAS HVY+ L + S +QPYRTG+HFQPP +WMNDPNGPMIYKGIYH
Sbjct: 19 IGNYVVNLEASHHVYKRLTQSTNTKSPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYH 78
Query: 76 FFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPA 131
FYQ+ +W +VW HSTSTD++NW PH AI+PS PFD N CWSGS TILP G P
Sbjct: 79 LFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPV 138
Query: 132 VLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP--ADQIDPGSFRDPTTAWI 189
+LYTGID N+QVQN+A PKNLSDPYL+EW K P NPLM P + I+ SFRDPTTAW+
Sbjct: 139 ILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWL 198
Query: 190 GPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSP 249
G DK WRVIIGSKI+ GLAI Y SKDF+ W K+ + L+ + SGMWECPDFFPV+
Sbjct: 199 GQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGS 258
Query: 250 KGVDTSVIG-PN--IKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDY 306
GV+TS G PN +KHVLK+SL + + DYYTIGTY+ D ++ + G D + RYDY
Sbjct: 259 NGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDY 318
Query: 307 GKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWP 366
GK+Y SKTFFDSAKNRRILWGW NESS+ D+++KGW+G+Q PR +WLD+SG+QL+QWP
Sbjct: 319 GKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWP 378
Query: 367 ISEIEKLRGNQVK-WPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNP 425
+ E+E+LR QVK K+L+ GS + + G+TAAQADVE+ F+ EKA+V++ WT+P
Sbjct: 379 VREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDP 438
Query: 426 QFLC------------PFGLLVLASNGLQEYTAVFFRIFKGQ---DRHIVLMCSDQSRSS 470
Q +C PFGL+VLAS L+EYT+V+FRIFK + ++++VLMCSDQSRSS
Sbjct: 439 QLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSS 498
Query: 471 INDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAH 530
+ +DNDKT+YGAF+D++P H+ LS+R+LID S+VESFGG G+ACIT+R+YP LAI +H
Sbjct: 499 LKEDNDKTTYGAFVDINP-HQPLSLRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSH 557
Query: 531 LYAFNNGTEKVNITSLRAWSMKKAQIN 557
L+AFN G + V++ +L AWSM AQI+
Sbjct: 558 LFAFNYGYQSVDVLNLNAWSMNSAQIS 584
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Beta-fructofuranosidase that can use sucrose and 1-kestose, and, to a lower extent, neokestose and levan, as substrates, but not inuline. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 6 |
| >sp|Q67XZ3|INV3_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV3 OS=Arabidopsis thaliana GN=CWINV3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/584 (55%), Positives = 418/584 (71%), Gaps = 40/584 (6%)
Query: 1 MGYSSICLFIFFALFLGHVFVKLEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSW 60
+ S+I L + ++FL + LEAS H +QPYRTGYHFQP +W
Sbjct: 4 LNRSNIGLSLLLSMFLANFITDLEASSH-------------QDLNQPYRTGYHFQPLKNW 50
Query: 61 MNDPNGPMIYKGIYHFFYQYK----LWDT-VVWGHSTSTDMVNWTPHDAAIYPSQPFDAN 115
MNDPNGPMIYKGIYH FYQY +WD +VWGHSTS D+VNW A PSQP D N
Sbjct: 51 MNDPNGPMIYKGIYHLFYQYNPYGAVWDVRIVWGHSTSVDLVNWISQPPAFNPSQPSDIN 110
Query: 116 SCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMV--PA 173
CWSGSVTILP G P +LYTGID QVQN+AVP N+SDPYL+EW KPP+NPLM
Sbjct: 111 GCWSGSVTILPNGKPVILYTGIDQNKGQVQNVAVPVNISDPYLREWSKPPQNPLMTTNAV 170
Query: 174 DQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDT-GLAILYRSKDFVNWTKAEQSLYSTNQ 232
+ I+P FRDPTTAW+G D WRVI+GS +D GLAILY+S+DF NWT++ + L+ +
Sbjct: 171 NGINPDRFRDPTTAWLGRDGEWRVIVGSSTDDRRGLAILYKSRDFFNWTQSMKPLHYEDL 230
Query: 233 SGMWECPDFFPVSTKSPKGVDTSVIGPN-IKHVLKVSLSNYQQDYYTIGTYNITTDTYIA 291
+GMWECPDFFPVS GV+TS +G N IKHVLKVSL DYYTIG+Y+ D Y+
Sbjct: 231 TGMWECPDFFPVSITGSDGVETSSVGENGIKHVLKVSLIETLHDYYTIGSYDREKDVYVP 290
Query: 292 EEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPR 351
+ G + S R DYGK+Y SKTF+D K RRILWGW+NESS D+++KGW+GLQ+ PR
Sbjct: 291 DLGFVQNESAPRLDYGKYYASKTFYDDVKKRRILWGWVNESSPAKDDIEKGWSGLQSFPR 350
Query: 352 NLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTA 411
+WLD+SG++L+QWPI EIE LRG QV W K+L+ GS + + G+TAAQADVE+SF+
Sbjct: 351 KIWLDESGKELLQWPIEEIETLRGQQVNWQKKVLKAGSTLQVHGVTAAQADVEVSFKVKE 410
Query: 412 FEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQEYTAVFFRIFKGQD--- 456
EKA+V++ WT+PQ +C PFGL+VLASN ++EYT+V+FRIFK D
Sbjct: 411 LEKADVIEPSWTDPQKICSQGDLSVMSGLGPFGLMVLASNDMEEYTSVYFRIFKSNDDTN 470
Query: 457 ---RHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKA 513
+++VLMCSDQSRSS+ND+NDK+++GAF+ +DP H+ +S+R+LID SIVES+GGGG+
Sbjct: 471 KKTKYVVLMCSDQSRSSLNDENDKSTFGAFVAIDPSHQTISLRTLIDHSIVESYGGGGRT 530
Query: 514 CITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
CIT+R+YP LAI + A+L+ FN GT+ V+I +L AWS+K AQIN
Sbjct: 531 CITSRVYPKLAIGENANLFVFNKGTQSVDILTLSAWSLKSAQIN 574
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6-fructan exohydrolase that can use phlein, levan, neokestose, levanbiose, 6-kestose, and 1-kestose as substrates. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 EC: 0 |
| >sp|Q70XE6|6FEH_BETVU Fructan 6-exohydrolase OS=Beta vulgaris GN=6-FEH PE=1 SV=1 | Back alignment and function description |
|---|
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/532 (60%), Positives = 398/532 (74%), Gaps = 21/532 (3%)
Query: 47 PYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYKLWDTV-----VWGHSTSTDMVNWTP 101
PYRT YHFQ P +WMNDPNGPMIYKGIYH FYQY +D V VWGHSTSTD++NWT
Sbjct: 54 PYRTAYHFQSPKNWMNDPNGPMIYKGIYHLFYQYYPYDPVWHTEIVWGHSTSTDLINWTQ 113
Query: 102 HDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEW 161
A+ PS+P+D N CWSGS+TILP P +LYTGI+ N QVQNLA+PKNLSDPYLKEW
Sbjct: 114 QPIALSPSEPYDINGCWSGSITILPQNKPVILYTGINNKNYQVQNLALPKNLSDPYLKEW 173
Query: 162 IKPPENPLMVPA----DQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDF 217
IK P+NPLM + I+ SFRDP+TAW D WRVI+G++ GLA+L+ S DF
Sbjct: 174 IKLPQNPLMAGTPTNNNNINASSFRDPSTAWQLSDGKWRVIVGTQQGKRGLAVLFTSDDF 233
Query: 218 VNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYY 277
V W L+ST +G+WECPDFFPV G DTS+IG ++KHVLK+SL + Q +YY
Sbjct: 234 VKWNNTGNPLHSTEGNGIWECPDFFPVYVGKSLGADTSIIGDDVKHVLKLSLFDTQYEYY 293
Query: 278 TIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSD 337
TIG Y+I D Y+ +EGS + + GLRYDYGKFY SK+FFD NRRILWGW+NESS ++D
Sbjct: 294 TIGRYDIEKDIYVPDEGSIESDLGLRYDYGKFYASKSFFDDETNRRILWGWVNESSIQAD 353
Query: 338 NLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGIT 397
++KKGW+G+QA PR + LDKSG+QL+QWP++E++ LR N V+ P+++++ GS+V I+ IT
Sbjct: 354 DIKKGWSGVQAIPRTVVLDKSGKQLVQWPLAEVDMLRENDVELPSQVIKGGSLVEISQIT 413
Query: 398 AAQADVEISFQTTAFEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQEYT 445
A+QADVEISF+ E LDS TNPQ LC PFGLL LAS GL+EYT
Sbjct: 414 ASQADVEISFKIPESNYVEELDSTCTNPQILCSQKGASIKGRFGPFGLLTLASMGLEEYT 473
Query: 446 AVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVE 505
AVFFRIFKG ++++VLMCSDQ+RSS+N DK S+G F+D+DP++E LS+R LID SIVE
Sbjct: 474 AVFFRIFKGPNKYVVLMCSDQTRSSLNPTTDKLSFGIFVDVDPINEDLSLRILIDHSIVE 533
Query: 506 SFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
SF GK+CITAR+YPT+AI+DKA LY FNNGTE V IT L AWSMKKAQIN
Sbjct: 534 SFSAKGKSCITARVYPTMAINDKAKLYVFNNGTEDVKITKLSAWSMKKAQIN 585
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Hydrolyzes levan-type beta-(2->6)-linked fructans to fructose, but not inulin-type beta-(2->1)-linked fructans. Beta vulgaris (taxid: 161934) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 5 EC: 4 |
| >sp|Q43089|INV1_PEA Beta-fructofuranosidase, cell wall isozyme OS=Pisum sativum GN=BFRUCT1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/553 (58%), Positives = 408/553 (73%), Gaps = 26/553 (4%)
Query: 1 MGYSSICLFIFFALFLGHVFVKLEASQHVYRTLQTCQSFSSSITS-QPYRTGYHFQPPSS 59
M SSI L F+L + +EA+ HVY+TL+T S SS ++ QPYRT YHFQP +
Sbjct: 1 MAISSIFLLSLFSLIY---VIPIEATHHVYQTLETLSSHHSSKSNHQPYRTAYHFQPLKN 57
Query: 60 WMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDAN 115
W+NDPNGPM Y G YH FYQY +W +VW HS S D+VNWTP D AI+PSQP D
Sbjct: 58 WINDPNGPMRYGGFYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDHAIHPSQPSDIK 117
Query: 116 SCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP--A 173
CWSGS TILPGG PA+LYTGID N QVQN+A+PKN+SDP L+EW K P+NPLM P A
Sbjct: 118 GCWSGSATILPGGKPAILYTGIDPNNHQVQNIAIPKNMSDPLLREWKKSPKNPLMEPTIA 177
Query: 174 DQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQS 233
++I+ SFRDPTT+W+G D WRV+IGSKI+ G+AILY+SK+FV+W +A+ L+S +
Sbjct: 178 NKINSSSFRDPTTSWLGKDGFWRVLIGSKIDTKGMAILYKSKNFVDWVEAKHPLHSAEGT 237
Query: 234 GMWECPDFFPVSTKS--PKGVDTSVIGPN-IKHVLKVSLSNYQQDYYTIGTYNITTDTYI 290
GMWECPDF+PV K+ GVDTS G + ++HVLKVSL + + D+Y IG+Y++ D ++
Sbjct: 238 GMWECPDFYPVLDKNLLRTGVDTSRNGDDDVRHVLKVSLDDTKHDHYLIGSYDVVKDVFV 297
Query: 291 AEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATP 350
E G D+ LRYDYGK+Y SKTFFD KNRRIL GW+NESS+ +D++KKGW+G+ P
Sbjct: 298 PENGFEDNGFVLRYDYGKYYASKTFFDDGKNRRILLGWVNESSSVADDVKKGWSGIHTIP 357
Query: 351 RNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTT 410
R +WL +SG+QL+QWP+ EIE LR N V WP K+++ G + ITG+ + QADVEISF+ +
Sbjct: 358 REIWLHESGKQLVQWPVKEIENLRMNPVNWPTKVIKGGERISITGVDSVQADVEISFEIS 417
Query: 411 AFEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQEYTAVFFRIFKGQDRH 458
K E L W +PQ LC PFGLLV AS GL+EYTAVFFRIFK QD++
Sbjct: 418 DLGKVESLRK-WIDPQLLCSQKGAGVKGGVGPFGLLVFASQGLKEYTAVFFRIFKYQDKN 476
Query: 459 IVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITAR 518
+VLMCSDQSRSS+N DND TSYG F+D+DP+HEKLS+R+LID S+VESFGG G+AC+TAR
Sbjct: 477 LVLMCSDQSRSSLNKDNDMTSYGTFVDVDPLHEKLSLRTLIDHSVVESFGGEGRACVTAR 536
Query: 519 IYPTLAIHDKAHL 531
+YPTLAIHDKA L
Sbjct: 537 VYPTLAIHDKAML 549
|
Pisum sativum (taxid: 3888) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q9LIB9|INV5_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV5 OS=Arabidopsis thaliana GN=CWINV5 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/576 (54%), Positives = 408/576 (70%), Gaps = 34/576 (5%)
Query: 3 YSSICLFIFFALFLGHVFVKLEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSWMN 62
+ +I +F+ +LFL + L + ++I +QPYRTGYHFQPP +WMN
Sbjct: 6 WCNIAMFLLVSLFL---------TDDAVVVLDALDNVPNNIKNQPYRTGYHFQPPKNWMN 56
Query: 63 DPNGPMIYKGIYHFFYQYKLWDTV------VWGHSTSTDMVNWTPHDAAIYPSQPFDANS 116
DPNGPMIYKGIYH FYQ+ V VWGH+TSTD++NW AI PS+P D N
Sbjct: 57 DPNGPMIYKGIYHLFYQWNQNGAVMDVNKTVWGHATSTDLINWITLSPAIRPSRPSDING 116
Query: 117 CWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPA--D 174
CWSGSVTILP G P +LYTG D N+QVQNL PKNL+DPYL+ W K PENPL+ P+ +
Sbjct: 117 CWSGSVTILPNGKPVILYTGNDRYNRQVQNLVKPKNLTDPYLRHWTKSPENPLVTPSPVN 176
Query: 175 QIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSG 234
I+ +FRDPTTAW G D WR+ GS+ GLAIL+ SKDFV W ++ + L+ + +G
Sbjct: 177 HINSSAFRDPTTAWFGRDGRWRITTGSQEGRRGLAILHTSKDFVIWKQSPKPLHYHDGTG 236
Query: 235 MWECPDFFPVSTKSPKGVDTSVI-GPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEE 293
MWECPDFFPV+ +G+DTS GP +KHVLKVSL++ DYYTIGTY+ D Y+ ++
Sbjct: 237 MWECPDFFPVARTDSRGLDTSFSSGPMVKHVLKVSLTDTFNDYYTIGTYDEVRDVYVPDK 296
Query: 294 GSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNL 353
G D + RYDYGKFY SKTF+DS RRILWGW+NESS DN+KKGWAGLQA PR +
Sbjct: 297 GFVQDETAPRYDYGKFYASKTFYDSVNQRRILWGWVNESSPEKDNIKKGWAGLQAIPRKV 356
Query: 354 WLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAF- 412
WLD+SG++L+QWP+ EIE+LR QVKW KLL+ GS++ + G+TA QADVE+ F+ + F
Sbjct: 357 WLDESGKRLVQWPVKEIERLRTTQVKWGNKLLKGGSVMEVHGVTAPQADVEVFFKVSGFD 416
Query: 413 -EKAEVLDSIWTNPQFLC----------PFGLLVLASNGLQEYTAVFFRIFKGQD---RH 458
EKA+V++ WT+PQ +C PFGL+VLAS ++EYT+V RIF+ + H
Sbjct: 417 LEKADVIEPGWTDPQLICSQRNASSGLGPFGLMVLASKNMEEYTSVNIRIFRAGENSKEH 476
Query: 459 IVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITAR 518
+V+MCSDQS SS+ NDKT+YGAFLD+ P ++ +S+R+LID+SIVESFGG GK CIT+R
Sbjct: 477 VVVMCSDQSTSSLEKGNDKTTYGAFLDISP-YQPISLRTLIDKSIVESFGGKGKTCITSR 535
Query: 519 IYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKA 554
+YP LAI ++ HL+AFN G++ VN+ SL AWSMK +
Sbjct: 536 VYPKLAIGERTHLFAFNKGSQNVNVLSLSAWSMKSS 571
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P26792|INV1_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 1 OS=Daucus carota GN=INV1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 617 bits (1592), Expect = e-176, Method: Compositional matrix adjust.
Identities = 300/554 (54%), Positives = 386/554 (69%), Gaps = 26/554 (4%)
Query: 23 LEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK- 81
+EA ++ LQ S + Q +RTGYHFQP +W+NDPNGPM YKG+YH FYQY
Sbjct: 37 VEAFHEIHYNLQ---SVGAENVKQVHRTGYHFQPKQNWINDPNGPMYYKGVYHLFYQYNP 93
Query: 82 ---LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGID 138
+W +VW HS STD++NWTP + AI+PS+PFD C SGS TILPG P +LYTGI
Sbjct: 94 KGAVWGNIVWAHSVSTDLINWTPLEPAIFPSKPFDKYGCRSGSATILPGNKPVILYTGIV 153
Query: 139 AG---NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIW 195
G N QVQN A+P NLSDPYL++WIKP NPL+V + + +FRDPTTAW+ W
Sbjct: 154 EGPPKNVQVQNYAIPANLSDPYLRKWIKPDNNPLVVANNGENATAFRDPTTAWLDKSGHW 213
Query: 196 RVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTS 255
++++GSK N G+A LYRSKDF+ WTKA+ ++S +GMWECPDFFPVS K G+DTS
Sbjct: 214 KMLVGSKRNRRGIAYLYRSKDFIKWTKAKHPIHSQANTGMWECPDFFPVSLKGLNGLDTS 273
Query: 256 VIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTF 315
V G ++KHVLKVSL + +YYT+GTY D YI + S D +GLRYDYG FY SKTF
Sbjct: 274 VTGESVKHVLKVSLDLTRYEYYTVGTYLTDKDRYIPDNTSVDGWAGLRYDYGNFYASKTF 333
Query: 316 FDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRG 375
FD +KNRRILWGW NES + + ++ KGWAG+Q PR LWLD SG+QLMQWPI E+E LRG
Sbjct: 334 FDPSKNRRILWGWANESDSTAHDVAKGWAGIQLIPRTLWLDPSGKQLMQWPIEELETLRG 393
Query: 376 NQVKWPAKL-LERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWT--NPQFLC--- 429
++VK+ K L +G +V + GITAAQADVE++F + K E D W + + +C
Sbjct: 394 SKVKFSRKQDLSKGILVEVKGITAAQADVEVTFSFKSLAKREPFDPKWLEYDAEKICSLK 453
Query: 430 ---------PFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSY 480
PFGLL LAS L+EYT VFFR+FK Q+ H VLMCSD +RSS+ + + S+
Sbjct: 454 GSTVQGGVGPFGLLTLASEKLEEYTPVFFRVFKAQNTHKVLMCSDATRSSLKEGLYRPSF 513
Query: 481 GAFLDLD-PVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTE 539
F+D+D +K+S+RSLID S+VESFG GK CI++R+YPTLA+++ AHLY FNNG+E
Sbjct: 514 AGFVDVDLATDKKISLRSLIDNSVVESFGAKGKTCISSRVYPTLAVYENAHLYVFNNGSE 573
Query: 540 KVNITSLRAWSMKK 553
+ + +L AWSMKK
Sbjct: 574 TITVENLDAWSMKK 587
|
May play an important role in phloem unloading and in stress response. Daucus carota (taxid: 4039) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q39693|INV3_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 3 OS=Daucus carota GN=INV3 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 580 bits (1495), Expect = e-164, Method: Compositional matrix adjust.
Identities = 285/555 (51%), Positives = 371/555 (66%), Gaps = 24/555 (4%)
Query: 19 VFVKLEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFY 78
+F+ + +R QS S+ +RTGYHFQP W+NDPNGPM YKG YH FY
Sbjct: 24 IFLNINGVDSTHRVFPELQSISAVDVKLVHRTGYHFQPQKHWINDPNGPMFYKGYYHLFY 83
Query: 79 QYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLY 134
QY +W +VW HS S D++NW + AI+PS+PFD CWSGS TILPG P +LY
Sbjct: 84 QYNPKGSVWGNIVWAHSVSKDLINWIALEPAIFPSKPFDQYGCWSGSATILPGNKPVILY 143
Query: 135 TGI---DAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGP 191
TGI D N QVQN AVP N SDP+L+EW+KP NPL V +P +FRDPTTAW
Sbjct: 144 TGIVSPDPENAQVQNYAVPANYSDPFLREWVKPDNNPL-VGVHTENPSAFRDPTTAWFDG 202
Query: 192 DKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKG 251
W++++GS G+A LYRSKDF W ++ +++ ++GMWECPDF+PVS +S G
Sbjct: 203 GH-WKMLVGSSRKHRGIAYLYRSKDFKKWKRSPHPIHTKAETGMWECPDFYPVSPRSEDG 261
Query: 252 VDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYG 311
+D S +G IKHVLKVSL++ + +YYTIG YN D Y+ + S D +GLRYDYG FY
Sbjct: 262 LDNSKMGRGIKHVLKVSLNSTRYEYYTIGRYNRVRDFYVPDNTSVDGWAGLRYDYGNFYA 321
Query: 312 SKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIE 371
SKTF+D K RRILWGW NES ++ D+++KGWAG+Q PR +WLD SGRQL+QWPI E+E
Sbjct: 322 SKTFYDPIKKRRILWGWANESDSQIDDVQKGWAGIQLIPRRIWLDPSGRQLVQWPIEEVE 381
Query: 372 KLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTN--PQFLC 429
LRG+++ + L+ G V +TGITAAQADV+ +F + +KAE D W N Q +C
Sbjct: 382 GLRGSELHMRNQKLDMGVHVEVTGITAAQADVDATFSFKSLDKAESFDPEWINLDAQDVC 441
Query: 430 ------------PFGLLVLASNGLQEYTAVFFRIFKGQDRHI-VLMCSDQSRSSINDDND 476
PFGLL LAS L+EYT VFFRIFK +D+ + VLMCSD RSS+ +
Sbjct: 442 DSMGSTIQGGLGPFGLLTLASKDLEEYTPVFFRIFKAEDQKLKVLMCSDAKRSSLAEGLY 501
Query: 477 KTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNN 536
K S+ F+D+D +K+S+RSLID S+VESFG K I++R+YPTLAI++ AHL+ FNN
Sbjct: 502 KPSFRGFVDVDLSDKKISLRSLIDNSVVESFGAQRKNLISSRVYPTLAIYNNAHLFVFNN 561
Query: 537 GTEKVNITSLRAWSM 551
GTE + + +L AWSM
Sbjct: 562 GTEPITVDNLDAWSM 576
|
May play an important role in phloem unloading and in stress response. Daucus carota (taxid: 4039) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q39692|INV2_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 2 OS=Daucus carota GN=INV2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 578 bits (1489), Expect = e-164, Method: Compositional matrix adjust.
Identities = 283/572 (49%), Positives = 378/572 (66%), Gaps = 26/572 (4%)
Query: 8 LFIFFALFLGHVFVKLEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSWMNDPNGP 67
LF+ +F+ + V + + ++ QS S+ +RTGYHFQP W+NDPNGP
Sbjct: 20 LFLSAVVFIFSLDVNIRGVEASHQVFPELQSVSAVNVQLVHRTGYHFQPKKHWINDPNGP 79
Query: 68 MIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVT 123
M YKG YH FYQY +W +VW HS S D++NW + AI+PS+PFD CWSGS T
Sbjct: 80 MYYKGFYHLFYQYNPKGAVWGNIVWAHSISKDLINWVALEPAIFPSKPFDKYGCWSGSAT 139
Query: 124 ILPGGNPAVLYTGI---DAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGS 180
+LPGG P ++YTGI N QVQN AVP N SDPYL+EWIKP NP+ V A + S
Sbjct: 140 VLPGGKPVIMYTGIVTPSPVNTQVQNFAVPANYSDPYLREWIKPDNNPI-VRARSENSSS 198
Query: 181 FRDPTTAWIGPDKI-WRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECP 239
FRDPTTAW D + W++++GS+ G+A LYRS++F+ WTKA+ L+S +++GMWEC
Sbjct: 199 FRDPTTAWF--DGVHWKILVGSRRKHRGIAYLYRSRNFLKWTKAKHPLHSKDRTGMWECL 256
Query: 240 DFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDN 299
DF+PV+ K G+DTSV G +IKHVLKVSL + + +YYT+G Y+ D Y+ + S D
Sbjct: 257 DFYPVAPKGMNGLDTSVTGQDIKHVLKVSLYSTRYEYYTVGEYDRDNDIYVPDNTSVDGW 316
Query: 300 SGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSG 359
+GLRYDYG FY SKTFFD K RRILWGW NES ++ D+++KGWAG+Q PR LWLD +G
Sbjct: 317 AGLRYDYGNFYASKTFFDPDKQRRILWGWANESDSKQDDVQKGWAGIQLIPRKLWLDPNG 376
Query: 360 RQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLD 419
+QL+QWPI EI+ LRG V +++L G + + G+TAAQADV+ +F + ++AE D
Sbjct: 377 KQLIQWPIEEIQLLRGQNVHMGSQVLNTGEHIEVKGVTAAQADVDATFSFKSLDRAEWFD 436
Query: 420 SIWTNPQFL--C------------PFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSD 465
W L C PFG L LAS L+EYT VFFR+FK +D+ VLMCSD
Sbjct: 437 PNWAKLDALDVCDWMGSTVRGGLGPFGFLTLASEKLEEYTPVFFRVFKTKDKLKVLMCSD 496
Query: 466 QSRSSINDDN-DKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLA 524
RSS + K + ++D+D +K+S+RSLID S+VESFG G+ CIT+R+YP +A
Sbjct: 497 AKRSSTTAEGLYKPPFAGYVDVDLSDKKISLRSLIDNSVVESFGAHGRTCITSRVYPKIA 556
Query: 525 IHDKAHLYAFNNGTEKVNITSLRAWSMKKAQI 556
I++ AH++ FNNGTE + I SL AWSMK +
Sbjct: 557 IYNNAHVFVFNNGTEAITIDSLDAWSMKAPSL 588
|
May play an important role in phloem unloading and in stress response. Daucus carota (taxid: 4039) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q0JDC6|INV3_ORYSJ Beta-fructofuranosidase, insoluble isoenzyme 3 OS=Oryza sativa subsp. japonica GN=CIN3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 565 bits (1455), Expect = e-160, Method: Compositional matrix adjust.
Identities = 271/550 (49%), Positives = 359/550 (65%), Gaps = 30/550 (5%)
Query: 37 QSFSSSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHST 92
QS + RTGYHFQPP W+NDPNGPM YKG+YH FYQY +W + W HS
Sbjct: 35 QSLEAKHVDGKLRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSV 94
Query: 93 STDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKN 152
STD+++WT + IYPS+ FD CWSGS T+LP G P ++YTGID +QVQN+A P N
Sbjct: 95 STDLIDWTALEPGIYPSKTFDEKGCWSGSATVLPSGVPVIMYTGIDPDERQVQNVAYPVN 154
Query: 153 LSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILY 212
LSDPYL+EW KP NP++ P I+ +FRDPTTAW GPD WR+++GSK+N GLA+LY
Sbjct: 155 LSDPYLREWYKPDYNPIINPDGGINASAFRDPTTAWYGPDGHWRLLVGSKVNMKGLAVLY 214
Query: 213 RSKDFVNWTKAEQSLYSTNQSGMWECPDFFPV-----STKSPKGVDT-----SVIGPNIK 262
RS+DF W KA L+S + +GMWECPDFFPV S +GVDT + + +K
Sbjct: 215 RSRDFKKWVKAHHPLHSAH-TGMWECPDFFPVAVAGGSRHYRRGVDTAELHDAAVAEEVK 273
Query: 263 HVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNR 322
+VLKVSL + +YYT+G Y+ TD Y+ + D++ GLRYDYG FY SK+F+D AK R
Sbjct: 274 YVLKVSLDLTRYEYYTVGWYDHATDRYVPDAAFPDNDYGLRYDYGDFYASKSFYDPAKRR 333
Query: 323 RILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPA 382
RI+WGW NES T D+ +KGWAG+QA PR LWL G+QL+QWP+ E++ LR V
Sbjct: 334 RIVWGWANESDTVPDDRRKGWAGIQAIPRKLWLSADGKQLVQWPVEELKALRAKHVNVTD 393
Query: 383 KLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIW-TNPQFLC------------ 429
K++++G+ +TG + Q+DV+++F KAE D W T+ + LC
Sbjct: 394 KVIKKGNYFEVTGFKSVQSDVDMAFAIKDLSKAEEFDPAWRTDAEALCKKLGSDVDGGVG 453
Query: 430 PFGLLVLASNGLQEYTAVFFRIFKGQD-RHIVLMCSDQSRSSINDDNDKTSYGAFLDLDP 488
PFGL LAS L+E TAVFFR+FK D H+VLMC+D +RSS + ++ F+D+D
Sbjct: 454 PFGLWALASGDLKERTAVFFRVFKANDSSHVVLMCNDPTRSSYESKIYRPTFAGFVDVDI 513
Query: 489 VHEK-LSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLR 547
K +++R+LID S+VESFG GK CI R+YP A+ D AHL+ FNNG V +T+L
Sbjct: 514 AKNKQIALRTLIDHSVVESFGARGKTCILTRVYPRKAVGDDAHLFVFNNGESDVKVTNLD 573
Query: 548 AWSMKKAQIN 557
AW MK ++N
Sbjct: 574 AWEMKTPKMN 583
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q01IS8|INV3_ORYSI Beta-fructofuranosidase, insoluble isoenzyme 3 OS=Oryza sativa subsp. indica GN=CIN3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 565 bits (1455), Expect = e-160, Method: Compositional matrix adjust.
Identities = 271/550 (49%), Positives = 359/550 (65%), Gaps = 30/550 (5%)
Query: 37 QSFSSSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHST 92
QS + RTGYHFQPP W+NDPNGPM YKG+YH FYQY +W + W HS
Sbjct: 35 QSLEAKHVDGKLRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGAVWGNIEWAHSV 94
Query: 93 STDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKN 152
STD+++WT + IYPS+ FD CWSGS T+LP G P ++YTGID +QVQN+A P N
Sbjct: 95 STDLIDWTALEPGIYPSKTFDEKGCWSGSATVLPSGVPVIMYTGIDPDERQVQNVAYPVN 154
Query: 153 LSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILY 212
LSDPYL+EW KP NP++ P I+ +FRDPTTAW GPD WR+++GSK+N GLA+LY
Sbjct: 155 LSDPYLREWYKPDYNPIINPDGGINASAFRDPTTAWYGPDGHWRLLVGSKVNMKGLAVLY 214
Query: 213 RSKDFVNWTKAEQSLYSTNQSGMWECPDFFPV-----STKSPKGVDT-----SVIGPNIK 262
RS+DF W KA L+S + +GMWECPDFFPV S +GVDT + + +K
Sbjct: 215 RSRDFKKWVKAHHPLHSAH-TGMWECPDFFPVAVAGGSRHYRRGVDTAELHDAAVAEEVK 273
Query: 263 HVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNR 322
+VLKVSL + +YYT+G Y+ TD Y+ + D++ GLRYDYG FY SK+F+D AK R
Sbjct: 274 YVLKVSLDLTRYEYYTVGWYDHATDRYVPDAAFPDNDYGLRYDYGDFYASKSFYDPAKRR 333
Query: 323 RILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPA 382
RI+WGW NES T D+ +KGWAG+QA PR LWL G+QL+QWP+ E++ LR V
Sbjct: 334 RIVWGWANESDTVPDDRRKGWAGIQAIPRKLWLSADGKQLVQWPVEELKALRAKHVNVTD 393
Query: 383 KLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIW-TNPQFLC------------ 429
K++++G+ +TG + Q+DV+++F KAE D W T+ + LC
Sbjct: 394 KVIKKGNYFEVTGFKSVQSDVDMAFAIKDLSKAEEFDPAWRTDAEALCKKLGSDVDGGVG 453
Query: 430 PFGLLVLASNGLQEYTAVFFRIFKGQD-RHIVLMCSDQSRSSINDDNDKTSYGAFLDLDP 488
PFGL LAS L+E TAVFFR+FK D H+VLMC+D +RSS + ++ F+D+D
Sbjct: 454 PFGLWALASGDLKERTAVFFRVFKANDSSHVVLMCNDPTRSSYESKIYRPTFAGFVDVDI 513
Query: 489 VHEK-LSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLR 547
K +++R+LID S+VESFG GK CI R+YP A+ D AHL+ FNNG V +T+L
Sbjct: 514 AKNKQIALRTLIDHSVVESFGARGKTCILTRVYPRKAVGDDAHLFVFNNGESDVKVTNLD 573
Query: 548 AWSMKKAQIN 557
AW MK ++N
Sbjct: 574 AWEMKTPKMN 583
|
Oryza sativa subsp. indica (taxid: 39946) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 557 | ||||||
| 385282634 | 577 | cell wall invertase 1 [Prunus persica] | 0.998 | 0.963 | 0.669 | 0.0 | |
| 408362889 | 577 | cell wall invertase [Malus x domestica] | 0.998 | 0.963 | 0.652 | 0.0 | |
| 225442303 | 575 | PREDICTED: beta-fructofuranosidase, inso | 0.969 | 0.939 | 0.674 | 0.0 | |
| 375300670 | 576 | cell wall invertase [Manihot esculenta] | 0.971 | 0.939 | 0.658 | 0.0 | |
| 47078691 | 576 | cell wall apoplastic invertase [Vitis vi | 0.987 | 0.954 | 0.660 | 0.0 | |
| 297743094 | 574 | unnamed protein product [Vitis vinifera] | 0.967 | 0.939 | 0.667 | 0.0 | |
| 4205115 | 577 | cell wall invertase precursor [Fragaria | 0.962 | 0.928 | 0.636 | 0.0 | |
| 356556769 | 575 | PREDICTED: beta-fructofuranosidase, cell | 0.992 | 0.961 | 0.611 | 0.0 | |
| 449523748 | 585 | PREDICTED: beta-fructofuranosidase, inso | 0.994 | 0.947 | 0.606 | 0.0 | |
| 449448102 | 585 | PREDICTED: beta-fructofuranosidase, inso | 0.994 | 0.947 | 0.605 | 0.0 |
| >gi|385282634|gb|AFI57904.1| cell wall invertase 1 [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/578 (66%), Positives = 460/578 (79%), Gaps = 22/578 (3%)
Query: 1 MGYSSICLFIFFALFLGHVFVKLEASQHVYRTLQTCQSFSSS---ITSQPYRTGYHFQPP 57
M SS L+ F +L+LGH +LEAS VYR L T +SS ++PYRTGYHFQPP
Sbjct: 1 MAISSPLLYCFLSLWLGHAVHQLEASHQVYRNLPTYSQLTSSHHHPVNEPYRTGYHFQPP 60
Query: 58 SSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFD 113
+W+NDPNGP+IYKGIYHFFYQY +W +VW HSTSTD+VNWTPHDAAIYPSQP D
Sbjct: 61 KNWINDPNGPLIYKGIYHFFYQYNPLDVVWGNIVWAHSTSTDLVNWTPHDAAIYPSQPSD 120
Query: 114 ANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP- 172
N CWSGS TILPGG P +LYTGID N+QVQNLA PKNLSDP+L+EW K P+NPLM P
Sbjct: 121 INGCWSGSATILPGGKPVMLYTGIDPQNRQVQNLAYPKNLSDPFLREWAKIPQNPLMAPS 180
Query: 173 -ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTN 231
A+QI+ SFRDPTTAW+GPDK WRVIIG K N TG AILYRSKDF+NW KA+Q L+S
Sbjct: 181 QANQINASSFRDPTTAWLGPDKKWRVIIGGKTNQTGEAILYRSKDFLNWVKAKQPLHSAE 240
Query: 232 QSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIA 291
++GMWECPDFFPVS S G+DTS IGP++KHV KVSL N +++YYTIGTYNI D YI
Sbjct: 241 KTGMWECPDFFPVSIHSQNGLDTSKIGPDVKHVFKVSLDNTRREYYTIGTYNIDKDIYIP 300
Query: 292 EEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPR 351
++GS + +SGLRYDYGKFY SKTFFDS+KNRRILWGWINESST D++KKGW+GLQA PR
Sbjct: 301 DKGSVESDSGLRYDYGKFYASKTFFDSSKNRRILWGWINESSTVEDDIKKGWSGLQAIPR 360
Query: 352 NLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTA 411
LWLDKSG+QL+QWP+ EIEKLR +VK P+ +L+ GS+ + G+TAAQADVEI+F +
Sbjct: 361 TLWLDKSGKQLVQWPVVEIEKLREKEVKLPSSVLKGGSVHEVLGVTAAQADVEITFGISD 420
Query: 412 FEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQEYTAVFFRIFKGQDRHI 459
+KAEVLD WTNPQ LC PFGLLVLAS GL+EYT+VF+RIFK ++H+
Sbjct: 421 LKKAEVLDPSWTNPQLLCSRKGASVKGGLGPFGLLVLASKGLKEYTSVFYRIFKDHNKHV 480
Query: 460 VLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARI 519
VL+CSDQSRSS+N DNDKT+YGAF+++DP+HEKLS+RSL++ SIVESFGG GKACITAR+
Sbjct: 481 VLLCSDQSRSSLNKDNDKTTYGAFVNVDPLHEKLSLRSLVNHSIVESFGGEGKACITARV 540
Query: 520 YPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
YPTLAI+ AHLYAFN GTE V IT AWS+K A+IN
Sbjct: 541 YPTLAINGDAHLYAFNYGTEDVKITG-SAWSLKTAKIN 577
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|408362889|gb|AFU56876.1| cell wall invertase [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/578 (65%), Positives = 453/578 (78%), Gaps = 22/578 (3%)
Query: 1 MGYSSICLFIFFALFLGHVFVKLEASQHVYRTLQTCQSFSSS---ITSQPYRTGYHFQPP 57
M SS+ L+ F L+LGH ++LEAS HVYR+LQT +SS ++PYRTGYHFQPP
Sbjct: 1 MAISSLFLYCFLCLWLGHAVLRLEASHHVYRSLQTYSELTSSHHHPDTEPYRTGYHFQPP 60
Query: 58 SSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFD 113
+W+NDPNGP+IYKGIYH FYQY +W +VW HSTSTD+VNWTPHDAAI+PSQP D
Sbjct: 61 KNWINDPNGPLIYKGIYHLFYQYNPKGVVWGNIVWAHSTSTDLVNWTPHDAAIFPSQPSD 120
Query: 114 ANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP- 172
N CWSGS TILP G P +LYTGI+ N+QVQNLA PKNLSDP+L+EW+K P+NPLM P
Sbjct: 121 INGCWSGSATILPSGKPVILYTGINPQNQQVQNLAYPKNLSDPFLREWVKVPQNPLMAPT 180
Query: 173 -ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTN 231
A+ I+ SFRDPTTAW+GPDK WRVIIGSK N GLAILYRSKDF++W KA+ L+S
Sbjct: 181 QANHINASSFRDPTTAWLGPDKRWRVIIGSKQNQRGLAILYRSKDFLSWVKAKHPLHSAK 240
Query: 232 QSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIA 291
++GMWECPDFFPVS G+D+S GP +KHVLK SL N + +YYTIGTYNI D YI
Sbjct: 241 KTGMWECPDFFPVSIHGQNGLDSSENGPAVKHVLKASLDNTKHEYYTIGTYNIDKDIYIP 300
Query: 292 EEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPR 351
++GS + +SGLRYDYGKFY SKTFFDS+KNRRILWGWINESS+ ++KKGW+GLQA PR
Sbjct: 301 DKGSVESDSGLRYDYGKFYASKTFFDSSKNRRILWGWINESSSVEGDIKKGWSGLQAIPR 360
Query: 352 NLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTA 411
LWL KSG+QL+QWP+ EIEKLRG VK P+ +L+ GS+ + G+TAAQADVEI+F +
Sbjct: 361 TLWLAKSGKQLVQWPVQEIEKLRGKTVKLPSTVLKGGSVREVVGVTAAQADVEITFGISD 420
Query: 412 FEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQEYTAVFFRIFKGQDRHI 459
F+KAEVLD WT+PQ LC PFGL VLAS L+EYTAVF+RIFK ++++
Sbjct: 421 FKKAEVLDPSWTDPQLLCGQKSATVKGSLGPFGLYVLASKDLKEYTAVFYRIFKANNKYV 480
Query: 460 VLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARI 519
VL+CSDQSRSS+N DNDKT+YGAF+ +DP+ EKLS+R+LID SIVESFGG GKACITAR+
Sbjct: 481 VLLCSDQSRSSLNKDNDKTTYGAFVKVDPLREKLSLRNLIDHSIVESFGGEGKACITARV 540
Query: 520 YPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
YPTLAI D AHLYAFN GTE V IT AWS+K A+IN
Sbjct: 541 YPTLAIDDDAHLYAFNYGTEDVKITG-SAWSLKTAKIN 577
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442303|ref|XP_002279788.1| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/559 (67%), Positives = 439/559 (78%), Gaps = 19/559 (3%)
Query: 17 GHVFVKLEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHF 76
GH FV LEAS VY LQ QS SS T QPYRTGYHFQP +WMNDPNGPMIYKG+YHF
Sbjct: 18 GHGFVPLEASHQVYIHLQN-QSPSSLKTHQPYRTGYHFQPRKNWMNDPNGPMIYKGLYHF 76
Query: 77 FYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132
FYQY +W +VW HSTSTD+VNWTPH AI PSQP D N CWSGS TILP G P +
Sbjct: 77 FYQYNPHGAVWGNIVWAHSTSTDLVNWTPHKYAISPSQPADINGCWSGSATILPNGKPVI 136
Query: 133 LYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPA--DQIDPGSFRDPTTAWIG 190
LYTGID NKQVQN+AVPKNLSDP+L EW K P+NPLM P + I+ SFRDPTTAW G
Sbjct: 137 LYTGIDPQNKQVQNMAVPKNLSDPFLLEWTKLPQNPLMEPTTINSINASSFRDPTTAWQG 196
Query: 191 PDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPK 250
D WRVIIGSKI GLAILYRSKDFV WTKA+ L+S +GMWECPDFFPVS S
Sbjct: 197 TDGRWRVIIGSKIKRKGLAILYRSKDFVRWTKAQHPLHSGKNTGMWECPDFFPVSINSST 256
Query: 251 GVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFY 310
GVDTS I +K+VLK+SL + + DYYTIG+YN DTY+ ++GS D++SGLRYDYGKFY
Sbjct: 257 GVDTSSISKTLKYVLKLSLDDTKHDYYTIGSYNREKDTYVPDKGSVDNDSGLRYDYGKFY 316
Query: 311 GSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEI 370
SKTFFD+AKNRRILWGWINESS+ +++KGW+G+QA PRN+WLDKSG+QL+QWPI+EI
Sbjct: 317 ASKTFFDNAKNRRILWGWINESSSVEHDIEKGWSGVQAIPRNVWLDKSGKQLLQWPIAEI 376
Query: 371 EKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLC- 429
EK R ++ L+ GS V + GITA+QADVEISF+ + F+KAEV D W+NPQ LC
Sbjct: 377 EKQRIKPGHMSSRELKGGSKVEVGGITASQADVEISFKISDFKKAEVFDESWSNPQLLCS 436
Query: 430 -----------PFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKT 478
PFGL+VLAS G++EYTAVFFRIFK Q +++VLMCSDQSRSS+++DNDKT
Sbjct: 437 QRGASVKGGLGPFGLMVLASKGMEEYTAVFFRIFKRQTKYVVLMCSDQSRSSLDNDNDKT 496
Query: 479 SYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGT 538
+YGAFLD+DPVHEKLS+RSLID SIVESFGGGGK CITAR+YPTLAI +AHLYAFN GT
Sbjct: 497 TYGAFLDVDPVHEKLSLRSLIDHSIVESFGGGGKVCITARVYPTLAIDGEAHLYAFNKGT 556
Query: 539 EKVNITSLRAWSMKKAQIN 557
V +T+LRAWSMKKA+IN
Sbjct: 557 GSVGMTTLRAWSMKKAKIN 575
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|375300670|gb|AFA46812.1| cell wall invertase [Manihot esculenta] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/559 (65%), Positives = 435/559 (77%), Gaps = 18/559 (3%)
Query: 17 GHVFVKLEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHF 76
G+ +LEAS H+Y T Q Q + S +SQPYRT YHFQPP +WMNDPNGPMIYKG+YH
Sbjct: 18 GYGVFELEASHHIYHTFQNLQESAVSASSQPYRTSYHFQPPKNWMNDPNGPMIYKGLYHL 77
Query: 77 FYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132
FYQY +W +VWGHSTS D+VNWTPH AIYPSQP D N WSGS TILP G PA+
Sbjct: 78 FYQYNPKGAVWGNIVWGHSTSKDLVNWTPHKVAIYPSQPSDINGTWSGSATILPDGKPAI 137
Query: 133 LYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPA--DQIDPGSFRDPTTAWIG 190
LYTGI+ N+QVQNLA+PKN SDPYL EW+K P NPLM P +QI+ SFRDPTTAW G
Sbjct: 138 LYTGINPLNQQVQNLAIPKNPSDPYLIEWVKSPNNPLMAPTPENQINASSFRDPTTAWRG 197
Query: 191 PDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPK 250
D W+VI+GSKIN GLA LYRSKDFV W KA+ L+S +GMWEC DFFPVS SP
Sbjct: 198 VDGRWKVIVGSKINRKGLAYLYRSKDFVYWIKAKHPLHSAKNTGMWECVDFFPVSANSPV 257
Query: 251 GVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFY 310
GV+ SV+G + K+VLK SL + + D YTIG Y+ D Y +EGS + + GLRYDYGKFY
Sbjct: 258 GVEMSVLGSDFKYVLKASLDDTKHDCYTIGEYDHVKDRYTPDEGSVEGDPGLRYDYGKFY 317
Query: 311 GSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEI 370
SKTFFDSAKNRR+LWGW+NESS+ SD++KKGWAG+QA PR +WLDKSG+QL+QWPI EI
Sbjct: 318 ASKTFFDSAKNRRLLWGWLNESSSVSDDIKKGWAGIQAIPRVVWLDKSGKQLVQWPIQEI 377
Query: 371 EKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLC- 429
EKLR N V P++ L+ GS+V + G+TA+QADVEI+F+ + F KAEVLD WTNPQ LC
Sbjct: 378 EKLRVNPVHLPSQYLKGGSVVEVPGVTASQADVEITFKVSDFSKAEVLDPSWTNPQLLCS 437
Query: 430 -----------PFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKT 478
PFGLLVLAS G+QEYT+VFFRIFKGQ++H+VLMCSDQSRSS+N DNDKT
Sbjct: 438 RKGGSVRGSLGPFGLLVLASKGMQEYTSVFFRIFKGQNKHVVLMCSDQSRSSLNPDNDKT 497
Query: 479 SYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGT 538
YGAF+D+DPVHE+LS+RSLID S+VESFGG GK CI+AR+YP LAI++ AHLYAFNNG+
Sbjct: 498 MYGAFVDVDPVHEQLSLRSLIDHSVVESFGGHGKNCISARVYPMLAINEAAHLYAFNNGS 557
Query: 539 EKVNITSLRAWSMKKAQIN 557
E V IT L AWSMKKA IN
Sbjct: 558 EAVTITRLSAWSMKKAHIN 576
|
Source: Manihot esculenta Species: Manihot esculenta Genus: Manihot Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|47078691|gb|AAT09980.1| cell wall apoplastic invertase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/568 (66%), Positives = 438/568 (77%), Gaps = 18/568 (3%)
Query: 8 LFIFFALFLGHVFVKLEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSWMNDPNGP 67
L FF+ FLGH FV LEAS SS T QPYRTGYHFQP +WMNDPNGP
Sbjct: 9 LGFFFSRFLGHGFVPLEASPPSLHPTSKISLPSSLKTHQPYRTGYHFQPRKNWMNDPNGP 68
Query: 68 MIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVT 123
MIYKG+YHFFYQY +W +VW HSTSTD+VNWTPH AI PSQP D N CWSGS T
Sbjct: 69 MIYKGLYHFFYQYNPHGAVWGNIVWAHSTSTDLVNWTPHKYAISPSQPADINGCWSGSAT 128
Query: 124 ILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPA--DQIDPGSF 181
ILP G P +LYTGID NKQVQN+AVPKNLSDP+L EW K +NPLM P + I+ SF
Sbjct: 129 ILPNGKPVILYTGIDPQNKQVQNMAVPKNLSDPFLLEWTKLSQNPLMEPTTINSINASSF 188
Query: 182 RDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDF 241
RDPTTAW G D WRVIIGSKI GLAILYRSKDFV WTKA+ L+S +GMWECPDF
Sbjct: 189 RDPTTAWQGTDGRWRVIIGSKIKRKGLAILYRSKDFVRWTKAQHPLHSGKNTGMWECPDF 248
Query: 242 FPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSG 301
FPVS S GVDTS I +K+VLK+SL + + DYYTIG+YN DTY+ ++GS D++SG
Sbjct: 249 FPVSINSSTGVDTSSISKTLKYVLKLSLDDTKHDYYTIGSYNREKDTYVPDKGSVDNDSG 308
Query: 302 LRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQ 361
LRYDYGKFY SKTFFD+AKNRRILWGWINESS+ +++KGW+G+QA PRN+WLDKSG+Q
Sbjct: 309 LRYDYGKFYASKTFFDNAKNRRILWGWINESSSVEHDIEKGWSGVQAIPRNVWLDKSGKQ 368
Query: 362 LMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSI 421
L+QWPI+EIEK R ++ L+ GS V + GITA+QADVEISF+ + F+KAEV D
Sbjct: 369 LLQWPIAEIEKQRIKPGHMSSRELKGGSKVEVGGITASQADVEISFKISDFKKAEVFDES 428
Query: 422 WTNPQFLC------------PFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRS 469
W+NPQ LC PFGL+VLAS G++EYTAVFFRIFK Q +++VLMCSDQSRS
Sbjct: 429 WSNPQLLCSQRGASVKGGLGPFGLMVLASKGMEEYTAVFFRIFKRQTKYVVLMCSDQSRS 488
Query: 470 SINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKA 529
S+++DNDKT+YGAFLD+DPVHEKLS+RSLID SIVESFGGGGK CITAR+YPTLAI +A
Sbjct: 489 SLDNDNDKTTYGAFLDVDPVHEKLSLRSLIDHSIVESFGGGGKVCITARVYPTLAIDGEA 548
Query: 530 HLYAFNNGTEKVNITSLRAWSMKKAQIN 557
HLYAFN GT V +T+LRAWSMKKA+IN
Sbjct: 549 HLYAFNKGTGSVGMTTLRAWSMKKAKIN 576
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297743094|emb|CBI35961.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/559 (66%), Positives = 435/559 (77%), Gaps = 20/559 (3%)
Query: 17 GHVFVKLEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHF 76
GH FV LEAS VY LQ QS SS T QPYRTGYHFQP +WMN PMIYKG+YHF
Sbjct: 18 GHGFVPLEASHQVYIHLQN-QSPSSLKTHQPYRTGYHFQPRKNWMNGI-WPMIYKGLYHF 75
Query: 77 FYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132
FYQY +W +VW HSTSTD+VNWTPH AI PSQP D N CWSGS TILP G P +
Sbjct: 76 FYQYNPHGAVWGNIVWAHSTSTDLVNWTPHKYAISPSQPADINGCWSGSATILPNGKPVI 135
Query: 133 LYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPA--DQIDPGSFRDPTTAWIG 190
LYTGID NKQVQN+AVPKNLSDP+L EW K P+NPLM P + I+ SFRDPTTAW G
Sbjct: 136 LYTGIDPQNKQVQNMAVPKNLSDPFLLEWTKLPQNPLMEPTTINSINASSFRDPTTAWQG 195
Query: 191 PDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPK 250
D WRVIIGSKI GLAILYRSKDFV WTKA+ L+S +GMWECPDFFPVS S
Sbjct: 196 TDGRWRVIIGSKIKRKGLAILYRSKDFVRWTKAQHPLHSGKNTGMWECPDFFPVSINSST 255
Query: 251 GVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFY 310
GVDTS I +K+VLK+SL + + DYYTIG+YN DTY+ ++GS D++SGLRYDYGKFY
Sbjct: 256 GVDTSSISKTLKYVLKLSLDDTKHDYYTIGSYNREKDTYVPDKGSVDNDSGLRYDYGKFY 315
Query: 311 GSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEI 370
SKTFFD+AKNRRILWGWINESS+ +++KGW+G+QA PRN+WLDKSG+QL+QWPI+EI
Sbjct: 316 ASKTFFDNAKNRRILWGWINESSSVEHDIEKGWSGVQAIPRNVWLDKSGKQLLQWPIAEI 375
Query: 371 EKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLC- 429
EK R ++ L+ GS V + GITA+QADVEISF+ + F+KAEV D W+NPQ LC
Sbjct: 376 EKQRIKPGHMSSRELKGGSKVEVGGITASQADVEISFKISDFKKAEVFDESWSNPQLLCS 435
Query: 430 -----------PFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKT 478
PFGL+VLAS G++EYTAVFFRIFK Q +++VLMCSDQSRSS+++DNDKT
Sbjct: 436 QRGASVKGGLGPFGLMVLASKGMEEYTAVFFRIFKRQTKYVVLMCSDQSRSSLDNDNDKT 495
Query: 479 SYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGT 538
+YGAFLD+DPVHEKLS+RSLID SIVESFGGGGK CITAR+YPTLAI +AHLYAFN GT
Sbjct: 496 TYGAFLDVDPVHEKLSLRSLIDHSIVESFGGGGKVCITARVYPTLAIDGEAHLYAFNKGT 555
Query: 539 EKVNITSLRAWSMKKAQIN 557
V +T+LRAWSMKKA+IN
Sbjct: 556 GSVGMTTLRAWSMKKAKIN 574
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|4205115|gb|AAD10960.1| cell wall invertase precursor [Fragaria x ananassa] | Back alignment and taxonomy information |
|---|
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/559 (63%), Positives = 437/559 (78%), Gaps = 23/559 (4%)
Query: 21 VKLEASQHVYRTLQTCQSFSSSITSQ-PYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQ 79
++L+AS HVY LQT Q S+ ++ PYRTGYHFQP +W+NDPNGP+IYKGIYH FYQ
Sbjct: 20 IELQASHHVYSNLQTTQLASTHPQAKDPYRTGYHFQPRKNWINDPNGPLIYKGIYHLFYQ 79
Query: 80 YK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYT 135
Y +W +VW HSTSTD+VNW PH+AAIYPS D N CWSGSVTILP G PA+LYT
Sbjct: 80 YNPSSVVWGNIVWAHSTSTDLVNWIPHEAAIYPSILSDINGCWSGSVTILPSGKPAILYT 139
Query: 136 GIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP--ADQIDPGSFRDPTTAWIGPDK 193
GI+ +QVQNLA PKNLSDP+L+EW+K P+NPLM P A+QI+ SFRDPTTAW+GPDK
Sbjct: 140 GINPDKEQVQNLAFPKNLSDPFLREWVKVPQNPLMAPTQANQINASSFRDPTTAWLGPDK 199
Query: 194 IWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVD 253
WR+IIGSK N GLAILYRSKDF++WTKA+ LYST ++GMWECPDFFPVS G+D
Sbjct: 200 RWRLIIGSKRNHRGLAILYRSKDFMHWTKAKHPLYSTPKNGMWECPDFFPVSKTKLLGLD 259
Query: 254 TSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSK 313
TS IGP++KHVLKVSL N +++YYTIGTYN++ D YI ++GS + +SGLRYDYGKFY SK
Sbjct: 260 TSAIGPDVKHVLKVSLDNTRKEYYTIGTYNVSKDIYIPDDGSIESDSGLRYDYGKFYASK 319
Query: 314 TFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKL 373
TFFDSAKNRRILWGWINESS+ S ++KKGW+GLQA PR + LDKS +QL+QWP+ E+EKL
Sbjct: 320 TFFDSAKNRRILWGWINESSSVSGDIKKGWSGLQAIPRTIVLDKSRKQLVQWPVVELEKL 379
Query: 374 RGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLC---- 429
R N+VK P+ LL+ GS+ + G+TAAQADV+++F+ + +KAEV+D WTN Q LC
Sbjct: 380 RTNEVKLPSTLLKGGSLHEVIGVTAAQADVDVAFEISDLKKAEVMDPSWTNAQLLCSKKG 439
Query: 430 --------PFGLLVLASNGLQEYTAVFFRIFKGQ---DRHIVLMCSDQSRSSINDDNDKT 478
PFGLL S L+E TA+F+RIFK ++++VLMCSDQSRSS+N DND T
Sbjct: 440 TSVKGALGPFGLLAFVSKDLKEKTAIFYRIFKSHNNNNKYVVLMCSDQSRSSLNPDNDMT 499
Query: 479 SYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGT 538
+YG F+++DP+HEKLS+RSLID SIVESFGG GK CITAR+YPTLA+ HLYAFN G+
Sbjct: 500 TYGTFVNVDPLHEKLSLRSLIDHSIVESFGGKGKECITARVYPTLAVDGDTHLYAFNYGS 559
Query: 539 EKVNITSLRAWSMKKAQIN 557
E V I AWSMK A+IN
Sbjct: 560 ESVKIAG-SAWSMKTAKIN 577
|
Source: Fragaria x ananassa Species: Fragaria x ananassa Genus: Fragaria Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356556769|ref|XP_003546695.1| PREDICTED: beta-fructofuranosidase, cell wall isozyme-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/579 (61%), Positives = 435/579 (75%), Gaps = 26/579 (4%)
Query: 1 MGYSSICLFI-FFALFLGHVFVKLEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSS 59
M S I L + F+L G+ + +EA+ HVYR LQT S SS QPYRT YHFQPP +
Sbjct: 1 MAVSPILLLLAIFSLIYGNGILPIEATHHVYRNLQTLSSDSSD---QPYRTAYHFQPPKN 57
Query: 60 WMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDAN 115
W+NDPNGPM YKG+YH FYQY +W +VW HS S D+VNWTP D AIYPSQP D N
Sbjct: 58 WINDPNGPMRYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDHAIYPSQPSDIN 117
Query: 116 SCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP--A 173
CWSGS TILPGG PA+LYTGID N QVQNLA+PKN+SDP L+EW+K P+NPLM P A
Sbjct: 118 GCWSGSATILPGGKPAILYTGIDPNNHQVQNLALPKNMSDPLLREWVKSPKNPLMAPTSA 177
Query: 174 DQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQS 233
+ I+ SFRDPTTAW+G D WRV+IGSKI+ G+AILY+SK+FVNW +A+Q L+S +
Sbjct: 178 NMINSSSFRDPTTAWLGKDGYWRVLIGSKIHTRGMAILYKSKNFVNWVQAKQPLHSAEGT 237
Query: 234 GMWECPDFFPVSTKSPK---GVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYI 290
GMWECPDF+PV P G+DTSV G N++HVLKVSL + + D+Y IGTY+I D +
Sbjct: 238 GMWECPDFYPVLNNKPSSTIGLDTSVNGDNVRHVLKVSLDDKKHDHYLIGTYDIAKDIFT 297
Query: 291 AEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATP 350
+ G D + LRYDYGK+Y SKT F+ KNRR+L GW+NESS+ SD++KKGWAG+ P
Sbjct: 298 PDNGFEDSQTVLRYDYGKYYASKTIFEDGKNRRVLLGWVNESSSVSDDIKKGWAGIHTIP 357
Query: 351 RNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTT 410
R +WL KSG+QL+QWP+ E+E LR N V WP K+++ G M+ +TG+TAAQADVEISF
Sbjct: 358 RAIWLHKSGKQLVQWPVVELESLRVNPVHWPTKVVKGGEMLQVTGVTAAQADVEISFDVN 417
Query: 411 AFEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQEYTAVFFRIFKGQDRH 458
F K EVLD W +PQ LC PFGLLV AS GLQEYTAVFFRIF+ Q+++
Sbjct: 418 EFGKGEVLDQ-WVDPQILCSRKGAAVKGGLGPFGLLVFASRGLQEYTAVFFRIFRYQNKN 476
Query: 459 IVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITAR 518
+VLMCSDQSRSS+N DND T+YG F+D+DP+HEKLS+R+LID S+VESFGG G+ACITAR
Sbjct: 477 LVLMCSDQSRSSLNKDNDMTTYGTFVDMDPLHEKLSLRTLIDHSVVESFGGEGRACITAR 536
Query: 519 IYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
+YPT+AI++KA LYAFNNGT V IT L AWSM+KA+IN
Sbjct: 537 VYPTIAINEKAQLYAFNNGTAAVKITRLSAWSMEKAKIN 575
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449523748|ref|XP_004168885.1| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/580 (60%), Positives = 427/580 (73%), Gaps = 26/580 (4%)
Query: 4 SSIC----LFIFFALFLGHVFVKLEASQHVYRTLQTCQSFS-SSITSQPYRTGYHFQPPS 58
SS+C +F+ L GH F++L+A HVYR F QPYRT YHFQPP
Sbjct: 6 SSLCFLNNIFLLIFLLFGHEFLQLQALHHVYRASHRTSHFVLHQHQQQPYRTSYHFQPPK 65
Query: 59 SWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDA 114
+W+NDPNGPMIYKGIYHFFYQY +W +VW HSTSTD++NW PHD AI+PSQP D
Sbjct: 66 NWINDPNGPMIYKGIYHFFYQYNPKGAVWGNIVWAHSTSTDLINWEPHDHAIFPSQPSDI 125
Query: 115 NSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPAD 174
N CWSGS TILPG PA+LYTGI+ N+QVQNLAVPKNLSDPYL+EW+K P+NPLM P
Sbjct: 126 NGCWSGSATILPGEKPAILYTGINPKNQQVQNLAVPKNLSDPYLREWVKSPKNPLMAPTP 185
Query: 175 Q--IDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQ 232
Q I+ SFRDPTTAW+G D WRVIIGSKI+ GLAI+YRSKDFV W + + L +
Sbjct: 186 QNHINVSSFRDPTTAWLGRDGEWRVIIGSKIDSRGLAIMYRSKDFVRWNQVDHPLRYKDD 245
Query: 233 SGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAE 292
GMWECPDFFPV+ GV+ V G ++KH+LKVSL + + D YT+GTYN D YI
Sbjct: 246 MGMWECPDFFPVAKTGRTGVEMKVSGSHVKHILKVSLDDTKHDVYTVGTYNWKKDIYIPN 305
Query: 293 EGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRN 352
+GS + +GLRYDYGK+Y SKTFFDS K RR+LWGW+NESS+ D++KKGW+G+QA PR
Sbjct: 306 KGSIEGYNGLRYDYGKYYASKTFFDSQKKRRVLWGWVNESSSVDDDIKKGWSGVQAIPRA 365
Query: 353 LWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAF 412
+WLD SG+QL+QWPI EI+KLR N+VK ++L++GS + + G+TAAQADVEISF+
Sbjct: 366 IWLDASGKQLIQWPIVEIQKLRDNKVKLTNEVLKKGSTIEVKGVTAAQADVEISFKVENL 425
Query: 413 EKAEVLDSIWTNPQFLC---------------PFGLLVLASNGLQEYTAVFFRIFKGQDR 457
+KAE+L W +PQ LC PFGLLVLASN L+EYT+VFF +FK Q +
Sbjct: 426 KKAEILKPEWKDPQLLCSQKGTSSTTEGGSVGPFGLLVLASNDLKEYTSVFFTVFKKQHK 485
Query: 458 HIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITA 517
++VLMC DQSRSS++ +NDKT+YGAFLD+DP E LS+RSLID SIVESFG GK CITA
Sbjct: 486 YVVLMCGDQSRSSLHSNNDKTTYGAFLDVDPTRENLSLRSLIDHSIVESFGIKGKGCITA 545
Query: 518 RIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
R+YPTLAI D LYAFNNGT+ V IT L AWSMKKA IN
Sbjct: 546 RVYPTLAIGDDVSLYAFNNGTDSVTITKLTAWSMKKAHIN 585
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449448102|ref|XP_004141805.1| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/580 (60%), Positives = 427/580 (73%), Gaps = 26/580 (4%)
Query: 4 SSIC----LFIFFALFLGHVFVKLEASQHVYRTLQTCQSFS-SSITSQPYRTGYHFQPPS 58
SS+C +F+ L GH F++L+A HVYR F QPYRT YHFQPP
Sbjct: 6 SSLCFLNNIFLLIFLLFGHEFLQLQALHHVYRASHRTSHFVLHQHQQQPYRTSYHFQPPK 65
Query: 59 SWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDA 114
+W+NDPNGPMIYKGIYHFFYQY +W +VW HSTSTD++NW PHD AI+PSQP D
Sbjct: 66 NWINDPNGPMIYKGIYHFFYQYNPKGAVWGNIVWAHSTSTDLINWEPHDHAIFPSQPSDI 125
Query: 115 NSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPAD 174
N CWSGS TILPG PA+LYTGI+ N+QVQNLAVPKNLSDPYL+EW+K P+NPLM P
Sbjct: 126 NGCWSGSATILPGEKPAILYTGINPKNQQVQNLAVPKNLSDPYLREWVKSPKNPLMAPTP 185
Query: 175 Q--IDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQ 232
Q I+ SFRDPTTAW+G D WRVIIGSKI+ GLAI+YRSKDFV W + + L +
Sbjct: 186 QNHINVSSFRDPTTAWLGRDGEWRVIIGSKIDARGLAIMYRSKDFVRWNQVDHPLRYKDD 245
Query: 233 SGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAE 292
GMWECPDFFPV+ GV+ V G ++KH+LKVSL + + D YT+GTYN D YI
Sbjct: 246 MGMWECPDFFPVAKTGRTGVEMKVSGSHVKHILKVSLDDTKHDVYTVGTYNWKKDIYIPN 305
Query: 293 EGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRN 352
+GS + +GLRYDYGK+Y SKTFFDS K RR+LWGW+NESS+ D++KKGW+G+QA PR
Sbjct: 306 KGSIEGYNGLRYDYGKYYASKTFFDSQKKRRVLWGWVNESSSVDDDIKKGWSGVQAIPRA 365
Query: 353 LWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAF 412
+WLD SG+QL+QWPI EI+KLR N+VK ++L++GS + + G+TAAQADVEISF+
Sbjct: 366 IWLDASGKQLIQWPIVEIQKLRNNKVKLTNEVLKKGSTIEVKGVTAAQADVEISFKVENL 425
Query: 413 EKAEVLDSIWTNPQFLC---------------PFGLLVLASNGLQEYTAVFFRIFKGQDR 457
+KAE+L W +PQ LC PFGLLVLASN L+EYT+VFF +FK +
Sbjct: 426 KKAEILKPEWKDPQLLCSQKGTSSTTEGGSVGPFGLLVLASNDLKEYTSVFFTVFKKPHK 485
Query: 458 HIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITA 517
++VLMCSDQSRSS++ +NDKT+YGAFLD+DP E +S+RSLID SIVESFG GK CITA
Sbjct: 486 YVVLMCSDQSRSSLHSNNDKTTYGAFLDVDPTRENISLRSLIDHSIVESFGIKGKGCITA 545
Query: 518 RIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
R+YPTLAI D LYAFNNGT+ V IT L AWSMKKA IN
Sbjct: 546 RVYPTLAIGDNVSLYAFNNGTDSVTITKLTAWSMKKAHIN 585
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 557 | ||||||
| TAIR|locus:2205677 | 594 | FRUCT5 "beta-fructofuranosidas | 0.789 | 0.740 | 0.561 | 2.8e-189 | |
| TAIR|locus:2091606 | 584 | ATBFRUCT1 [Arabidopsis thalian | 0.992 | 0.946 | 0.576 | 7.1e-187 | |
| TAIR|locus:2079944 | 590 | CWINV2 "cell wall invertase 2" | 0.809 | 0.764 | 0.494 | 6.2e-157 | |
| TAIR|locus:2049445 | 591 | cwINV4 "cell wall invertase 4" | 0.838 | 0.790 | 0.474 | 7.9e-157 | |
| TAIR|locus:2143099 | 550 | cwINV6 "6-&1-fructan exohydrol | 0.843 | 0.854 | 0.520 | 2.1e-132 | |
| UNIPROTKB|Q9FSV7 | 654 | 1-SST "Sucrose:sucrose 1-fruct | 0.912 | 0.776 | 0.407 | 2.5e-97 | |
| TAIR|locus:2201966 | 664 | ATBETAFRUCT4 [Arabidopsis thal | 0.666 | 0.558 | 0.449 | 4.3e-93 | |
| TAIR|locus:2026177 | 648 | AT1G62660 [Arabidopsis thalian | 0.682 | 0.586 | 0.446 | 1.5e-92 | |
| UNIPROTKB|Q4KBP1 | 499 | scrB "Sucrose-6-phosphate hydr | 0.567 | 0.633 | 0.298 | 1.6e-39 | |
| UNIPROTKB|Q48BH6 | 497 | scrB "Sucrose-6-phosphate hydr | 0.536 | 0.601 | 0.317 | 3.3e-38 |
| TAIR|locus:2205677 FRUCT5 "beta-fructofuranosidase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1408 (500.7 bits), Expect = 2.8e-189, Sum P(2) = 2.8e-189
Identities = 266/474 (56%), Positives = 331/474 (69%)
Query: 4 SSICLFIFFALFLGHVFVKLEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSWMND 63
S+I L + ++FL + LEAS H Q + QPYRTGYHFQP +WMND
Sbjct: 7 SNIGLSLLLSMFLANFITDLEASSH--------QDLN-----QPYRTGYHFQPLKNWMND 53
Query: 64 PNGPMIYKGIYHFFYQYK----LWDT-VVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCW 118
PNGPMIYKGIYH FYQY +WD +VWGHSTS D+VNW A PSQP D N CW
Sbjct: 54 PNGPMIYKGIYHLFYQYNPYGAVWDVRIVWGHSTSVDLVNWISQPPAFNPSQPSDINGCW 113
Query: 119 SGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP--ADQI 176
SGSVTILP G P +LYTGID QVQN+AVP N+SDPYL+EW KPP+NPLM + I
Sbjct: 114 SGSVTILPNGKPVILYTGIDQNKGQVQNVAVPVNISDPYLREWSKPPQNPLMTTNAVNGI 173
Query: 177 DPGSFRDPTTAWIGPDKIWRVIIGSKINDT-GLAILYRSKDFVNWTKAEQSLYSTNQSGM 235
+P FRDPTTAW+G D WRVI+GS +D GLAILY+S+DF NWT++ + L+ + +GM
Sbjct: 174 NPDRFRDPTTAWLGRDGEWRVIVGSSTDDRRGLAILYKSRDFFNWTQSMKPLHYEDLTGM 233
Query: 236 WECPDFFPVSTKSPKGVDTSVIGPN-IKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEG 294
WECPDFFPVS GV+TS +G N IKHVLKVSL DYYTIG+Y+ D Y+ + G
Sbjct: 234 WECPDFFPVSITGSDGVETSSVGENGIKHVLKVSLIETLHDYYTIGSYDREKDVYVPDLG 293
Query: 295 SFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLW 354
+ S R DYGK+Y SKTF+D K RRILWGW+NESS D+++KGW+GLQ+ PR +W
Sbjct: 294 FVQNESAPRLDYGKYYASKTFYDDVKKRRILWGWVNESSPAKDDIEKGWSGLQSFPRKIW 353
Query: 355 LDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEK 414
LD+SG++L+QWPI EIE LRG QV W K+L+ GS + + G+TAAQADVE+SF+ EK
Sbjct: 354 LDESGKELLQWPIEEIETLRGQQVNWQKKVLKAGSTLQVHGVTAAQADVEVSFKVKELEK 413
Query: 415 AEVLDSIWTNPQFLC------------PFGLLVLASNGLQEYTAVFFRIFKGQD 456
A+V++ WT+PQ +C PFGL+VLASN ++EYT+V+FRIFK D
Sbjct: 414 ADVIEPSWTDPQKICSQGDLSVMSGLGPFGLMVLASNDMEEYTSVYFRIFKSND 467
|
|
| TAIR|locus:2091606 ATBFRUCT1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1812 (642.9 bits), Expect = 7.1e-187, P = 7.1e-187
Identities = 334/579 (57%), Positives = 429/579 (74%)
Query: 4 SSICLFIFFALFLGHVFVKLEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSWMND 63
S+I L++ L +G+ V LEAS HVY+ L + S +QPYRTG+HFQPP +WMND
Sbjct: 7 SNIGLWLLLTLLIGNYVVNLEASHHVYKRLTQSTNTKSPSVNQPYRTGFHFQPPKNWMND 66
Query: 64 PNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWS 119
PNGPMIYKGIYH FYQ+ +W +VW HSTSTD++NW PH AI+PS PFD N CWS
Sbjct: 67 PNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWS 126
Query: 120 GSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP--ADQID 177
GS TILP G P +LYTGID N+QVQN+A PKNLSDPYL+EW K P NPLM P + I+
Sbjct: 127 GSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGIN 186
Query: 178 PGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWE 237
SFRDPTTAW+G DK WRVIIGSKI+ GLAI Y SKDF+ W K+ + L+ + SGMWE
Sbjct: 187 ASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWE 246
Query: 238 CPDFFPVSTKSPKGVDTSVIG-PN--IKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEG 294
CPDFFPV+ GV+TS G PN +KHVLK+SL + + DYYTIGTY+ D ++ + G
Sbjct: 247 CPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNG 306
Query: 295 SFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLW 354
D + RYDYGK+Y SKTFFDSAKNRRILWGW NESS+ D+++KGW+G+Q PR +W
Sbjct: 307 FKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIW 366
Query: 355 LDKSGRQLMQWPISEIEKLRGNQVK-WPAKLLERGSMVGITGITAAQADVEISFQTTAFE 413
LD+SG+QL+QWP+ E+E+LR QVK K+L+ GS + + G+TAAQADVE+ F+ E
Sbjct: 367 LDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLE 426
Query: 414 KAEVLDSIWTNPQFLC------------PFGLLVLASNGLQEYTAVFFRIFKGQ---DRH 458
KA+V++ WT+PQ +C PFGL+VLAS L+EYT+V+FRIFK + +++
Sbjct: 427 KADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKY 486
Query: 459 IVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITAR 518
+VLMCSDQSRSS+ +DNDKT+YGAF+D++P H+ LS+R+LID S+VESFGG G+ACIT+R
Sbjct: 487 VVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSLRALIDHSVVESFGGKGRACITSR 545
Query: 519 IYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
+YP LAI +HL+AFN G + V++ +L AWSM AQI+
Sbjct: 546 VYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 584
|
|
| TAIR|locus:2079944 CWINV2 "cell wall invertase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1225 (436.3 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 234/473 (49%), Positives = 306/473 (64%)
Query: 23 LEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK- 81
++A V++ LQ+ +S S S +RT YHFQPP W+NDPN PM+YKG+YH FYQY
Sbjct: 23 VDAFHKVFKKLQS-KSTSLESVSPLHRTAYHFQPPRHWINDPNAPMLYKGVYHLFYQYNP 81
Query: 82 ---LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGID 138
+W +VW HS S D++NW + AIYPS+ FD N WSGS T +PG P +LYTGI
Sbjct: 82 KGAVWGNIVWAHSVSKDLINWEALEPAIYPSKWFDINGTWSGSATHVPGKGPVILYTGIT 141
Query: 139 AGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGP-DKIWRV 197
Q+QN A+P++LSDPYLK WIKP +NP++ P + + +FRDPTTAW D WR+
Sbjct: 142 ENQTQIQNYAIPQDLSDPYLKTWIKPDDNPIVKPDNGENGSAFRDPTTAWFNKKDGYWRM 201
Query: 198 IIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPK-GVDTSV 256
++GSK + G+A +Y+S+DF W K+++ ++S ++GMWECPDFFPVS K G+D S
Sbjct: 202 LVGSKRKNRGIAYMYKSRDFKKWVKSKRPIHSRKKTGMWECPDFFPVSVTDKKNGLDFSY 261
Query: 257 IGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFF 316
GPN KHVLKVSL + +YYT+GTY+ D Y + + D GLR+DYG +Y SKTFF
Sbjct: 262 DGPNAKHVLKVSLDLTRYEYYTLGTYDTKKDRYRPDGYTPDGWDGLRFDYGNYYASKTFF 321
Query: 317 DSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGN 376
D NRRILWGW NES T D+ KGWAG+Q PR + LD SG+QL+ WPI EIE LRG
Sbjct: 322 DDKTNRRILWGWANESDTVQDDTVKGWAGIQLIPRTILLDSSGKQLVFWPIEEIESLRGK 381
Query: 377 QVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLD-SIWTNPQFLC------ 429
V+ + +E G + GIT AQ DV+++F EKAE D S T P LC
Sbjct: 382 NVQMTNQKMEMGQRFEVQGITPAQVDVDVTFNVGNLEKAEKFDESFATKPLELCNLKGSN 441
Query: 430 ------PFGLLVLASNGLQEYTAVFFRIFK--GQDRHIVLMCSDQSRSSINDD 474
PFGL+ LA++ L+EYT VFFR+FK ++ VLMCSD SS+ D
Sbjct: 442 VNGGVGPFGLITLATSDLEEYTPVFFRVFKDAASNKPKVLMCSDAKPSSLKKD 494
|
|
| TAIR|locus:2049445 cwINV4 "cell wall invertase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1230 (438.0 bits), Expect = 7.9e-157, Sum P(2) = 7.9e-157
Identities = 233/491 (47%), Positives = 314/491 (63%)
Query: 5 SICLFIFFALFLGHVFVK-LEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSWMND 63
S+ L + + L + +K ++A +Y LQ+ +S S + +R +HFQPP W+ND
Sbjct: 8 SVLLLLLVLINLSNQNIKGIDAFHQIYEELQS-ESVES--VNHLHRPSFHFQPPKHWIND 64
Query: 64 PNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWS 119
PNGP+ YKG+YH FYQY +W ++W HS S D+VNW + A+ PS+ FD WS
Sbjct: 65 PNGPVYYKGLYHLFYQYNTKGAVWGNIIWAHSVSKDLVNWEALEPALSPSKWFDIGGTWS 124
Query: 120 GSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPG 179
GS+TI+PG P +LYTG++ Q+QN A+P++ SDPYL++WIKP +NP+ +P ++
Sbjct: 125 GSITIVPGKGPIILYTGVNQNETQLQNYAIPEDPSDPYLRKWIKPDDNPIAIPDYTMNGS 184
Query: 180 SFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECP 239
+FRDPTTAW D WR ++GSK G+A +YRS+DF +W KA+ ++S +GMWECP
Sbjct: 185 AFRDPTTAWFSKDGHWRTVVGSKRKRRGIAYIYRSRDFKHWVKAKHPVHSKQSTGMWECP 244
Query: 240 DFFPVS-TKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDD 298
DFFPVS T G+D +GPN KHVLKVSL + +YYT+G Y++ D YI + + D
Sbjct: 245 DFFPVSLTDFRNGLDLDYVGPNTKHVLKVSLDITRYEYYTLGKYDLKKDRYIPDGNTPDG 304
Query: 299 NSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKS 358
GLR+DYG FY SKTFFD KNRRILWGW NES T D++ KGWAGLQ PR + LD S
Sbjct: 305 WEGLRFDYGNFYASKTFFDYKKNRRILWGWANESDTVEDDILKGWAGLQVIPRTVLLDSS 364
Query: 359 GRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVL 418
+QL+ WP+ EIE LRGN V+ ++ G + + GIT AQADVE++F + EKAE+
Sbjct: 365 KKQLVFWPVEEIESLRGNYVRMNNHDIKMGQRIEVKGITPAQADVEVTFYVGSLEKAEIF 424
Query: 419 DSIWT-NPQFLC------------PFGLLVLASNGLQEYTAVFFRIFKGQDRHI--VLMC 463
D +T P LC PFGL+ LA+ L+EYT VFFR+F H VLMC
Sbjct: 425 DPSFTWKPLELCNIKGSNVRGGVGPFGLITLATPDLEEYTPVFFRVFNDTKTHKPKVLMC 484
Query: 464 SDQSRSSINDD 474
SD SS+ D
Sbjct: 485 SDARPSSLKQD 495
|
|
| TAIR|locus:2143099 cwINV6 "6-&1-fructan exohydrolase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1298 (462.0 bits), Expect = 2.1e-132, P = 2.1e-132
Identities = 254/488 (52%), Positives = 325/488 (66%)
Query: 86 VVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQ-V 144
++WGHS S DMVNW + A+ PS+ FD NSCWSGS TILP G P +LYTG+D NKQ V
Sbjct: 60 IIWGHSVSQDMVNWIQLEPALVPSESFDINSCWSGSATILPDGRPVILYTGLDVNNKQQV 119
Query: 145 QNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN 204
+A PK++SDP L+EW+KP NP+MVP + FRDPT AW G D WRV+IG+K
Sbjct: 120 TVVAEPKDVSDPLLREWVKPKYNPVMVPPSNVPFNCFRDPTEAWKGQDGKWRVLIGAKEK 179
Query: 205 DT--GLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIK 262
DT G+AILYRS DFV WTK L + +GMWECPDFFPVS +GVDTSV +++
Sbjct: 180 DTEKGMAILYRSDDFVQWTKYPVPLLESEGTGMWECPDFFPVSITGKEGVDTSVNNASVR 239
Query: 263 HVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNR 322
HVLK S D Y IG Y+ T+ + A+ + ++ LRYD+G FY SK FFDS KNR
Sbjct: 240 HVLKASFGG--NDCYVIGKYSSETEDFSADYEFTNTSADLRYDHGTFYASKAFFDSVKNR 297
Query: 323 RILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWP- 381
RI WGW+ E+ ++ D+ KKGWAGL PR +W+D SG++LMQWPI EI LR V
Sbjct: 298 RINWGWVIETDSKEDDFKKGWAGLMTLPREIWMDTSGKKLMQWPIEEINNLRTKSVSLDD 357
Query: 382 AKLLERGSMVGITGITAAQADVEISFQTTAFEK-AEVLDSIWTNPQFL--------C--- 429
+ GS I+GITAAQADVE++F E E+LD+ + L C
Sbjct: 358 CYEFKTGSTFEISGITAAQADVEVTFNLPFLENNPEILDADQVDDATLFDRDSSVGCVYG 417
Query: 430 PFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPV 489
PFGLL LAS+ L E TA+FF++ + + + V+MCS + RSS+ D+ K+S+GAFLD+DP
Sbjct: 418 PFGLLALASSDLSEQTAIFFKVIRRGNGYAVVMCSSEKRSSLRDNIKKSSHGAFLDIDPR 477
Query: 490 HEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAW 549
HEK+S+R LID SI+ES+G GGK IT+R+YP LAI + A LY FN+G V +TSL AW
Sbjct: 478 HEKISLRCLIDHSIIESYGVGGKTVITSRVYPKLAIGEAAKLYVFNDGENGVIMTSLEAW 537
Query: 550 SMKKAQIN 557
SM+ AQIN
Sbjct: 538 SMRNAQIN 545
|
|
| UNIPROTKB|Q9FSV7 1-SST "Sucrose:sucrose 1-fructosyltransferase" [Festuca arundinacea (taxid:4606)] | Back alignment and assigned GO terms |
|---|
Score = 967 (345.5 bits), Expect = 2.5e-97, P = 2.5e-97
Identities = 219/537 (40%), Positives = 301/537 (56%)
Query: 41 SSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDM 96
S+ Q RTG+HFQP +MNDPNGP+ Y G YH FYQY W + W H+ S DM
Sbjct: 114 SNAMLQWQRTGFHFQPEKHYMNDPNGPVYYGGWYHLFYQYNPKGDSWGNIAWAHAVSKDM 173
Query: 97 VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDP 156
VNW A+ P Q +D+N +GS+T+LP G +LYTG QVQ LA P + SDP
Sbjct: 174 VNWRHLPLAMVPDQWYDSNGVLTGSITVLPDGQVILLYTGNTDTLAQVQCLATPADPSDP 233
Query: 157 YLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIG-PDKIWRVIIGSKIND--TGLAILYR 213
L+EWIK P NP++ P I FRDP TAW D WR +IGSK +D G+ + Y+
Sbjct: 234 LLREWIKHPANPILYPPPGIGLKDFRDPLTAWFDHSDNTWRTVIGSKDDDGHAGIILSYK 293
Query: 214 SKDFVNWTKAEQSLY-STNQSGMWECPDFFPVSTKSPK--GVDTSVIGPNIKHVLKVSLS 270
+KDFVN+ +++ + +GM+EC D +PV S + G D S P++ VLK S
Sbjct: 294 TKDFVNYELMPGNMHRGPDGTGMYECIDLYPVGGNSSEMLGGDDS---PDVLFVLKESSD 350
Query: 271 NYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWIN 330
+ + DYY +G ++ + + + D GLRYD+GK+Y SK+F+D KNRRI+W +I
Sbjct: 351 DERHDYYALGRFDAAANIWTPIDQELDLGIGLRYDWGKYYASKSFYDQKKNRRIVWAYIG 410
Query: 331 ESSTRSDNLKKGWAGLQATPRNLWLDKSGR-QLMQWPISEIEKLRGNQVKWPAKLLERGS 389
E+ + ++ KGWA L PR + LDK R L+QWP+ E++ LR N ++ GS
Sbjct: 411 ETDSEQADITKGWANLMTIPRTVELDKKTRTNLIQWPVEELDTLRRNSTDLSGITVDAGS 470
Query: 390 MVGITGITAAQADVEISFQTT-----AFEKAEVLDSIWTNPQF----LCPFGLLVLASNG 440
++ + AQ D+E SFQ A +A+V + T+ L PFGLLVLA NG
Sbjct: 471 VIRLPLHQGAQIDIEASFQLNSSDVDALTEADVSYNCSTSGAAVRGALGPFGLLVLA-NG 529
Query: 441 LQEYTAVFFRIFKGQDRHIVL-MCSDQSRSSINDDNDKTSYGAFLD-LDPVHEKLSIRSL 498
E TAV+F + KG D + C D+SRS+ D G+ + LD E S+R L
Sbjct: 530 RTEQTAVYFYVSKGVDGALQTHFCHDESRSTQAKDVVNRMIGSIVPVLDG--ETFSVRVL 587
Query: 499 IDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGT-EKVNITSLRAWSMKKA 554
+D SIV+SF GG+ T+R YPT AI+ A +Y FNN T V L + M A
Sbjct: 588 VDHSIVQSFAMGGRITATSRAYPTEAIYAAAGVYLFNNATGATVTAERLVVYEMASA 644
|
|
| TAIR|locus:2201966 ATBETAFRUCT4 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 172/383 (44%), Positives = 249/383 (65%)
Query: 49 RTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDA 104
RT +HFQP +WMNDPNGP+ YKG YHFFYQY +W +VWGH+ S D+++W
Sbjct: 121 RTAFHFQPEQNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVSRDLIHWVHLPI 180
Query: 105 AIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKP 164
A+ Q +D+N W+GS T LP G+ +LYTG QVQNLA P++ +DP L +W+K
Sbjct: 181 AMVADQWYDSNGVWTGSATFLPDGSIVMLYTGSTDKAVQVQNLAYPEDPNDPLLLKWVKF 240
Query: 165 PENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAE 224
P NP++VP I P FRDPTTAW + WR+ IGSK+N TG++++Y + DF + K +
Sbjct: 241 PGNPVLVPPPGILPKDFRDPTTAWKTSEGKWRITIGSKLNKTGISLVYDTIDFKTYEKLD 300
Query: 225 QSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNI 284
L+ +GMWEC DF+PVS + G+DTSV GP++KH++K S+ + + D+Y +GTY
Sbjct: 301 TLLHRVPNTGMWECVDFYPVSKTAGNGLDTSVNGPDVKHIVKASMDDTRFDHYAVGTYFD 360
Query: 285 TTDTYIAEEGSFDDN--SGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKG 342
+ T+I ++ + D + LRYDYGKFY SK+F+D K RR+LW WI ES + + +++KG
Sbjct: 361 SNGTWIPDDPTIDVGMTASLRYDYGKFYASKSFYDQNKGRRVLWSWIGESDSEASDVQKG 420
Query: 343 WAGLQATPRNLWLD-KSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQA 401
W+ LQ PR + LD K+G+ L+QWP+ EI+ LR + ++ ++ GS+V + +AAQ
Sbjct: 421 WSSLQGIPRTVVLDTKTGKNLVQWPVEEIKSLRLSSKQFDLEV-GPGSVVPVDVGSAAQL 479
Query: 402 DVEISFQTTAFEKAEVLDSIWTN 424
D+E F+ E LD I N
Sbjct: 480 DIEAEFEINK----ESLDKIIGN 498
|
|
| TAIR|locus:2026177 AT1G62660 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
Identities = 174/390 (44%), Positives = 248/390 (63%)
Query: 49 RTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDA 104
RT +HFQP +WMNDPNGP+ YKG YHFFYQY +W +VWGH+ S D+++W
Sbjct: 106 RTAFHFQPEKNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVSKDLIHWLYLPI 165
Query: 105 AIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKP 164
A+ P Q +DAN W+GS T L G+ +LYTG QVQNLA P++ SDP L +W+K
Sbjct: 166 AMVPDQWYDANGVWTGSATFLDDGSIVMLYTGSTDEFVQVQNLAYPEDPSDPLLLKWVKF 225
Query: 165 PENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAE 224
NP++VP I FRDPTTAW WR+ IGSKIN TG++++Y + DF + K E
Sbjct: 226 SGNPVLVPPPGIGAKDFRDPTTAWKTSSGKWRITIGSKINRTGISLIYDTTDFKTYEKHE 285
Query: 225 QSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNI 284
L+ +GMWEC DF+PVS G+DTSV GP++KHV+K S+ + + D+Y IGTY+
Sbjct: 286 TLLHQVPNTGMWECVDFYPVSKTQLNGLDTSVNGPDVKHVIKASMDDTRIDHYAIGTYDD 345
Query: 285 TTDTYIAEEGSFDD--NSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKG 342
+ T++ + S D ++GLRYDYGK+Y SKTF+D K RRILWGWI ES + + +++KG
Sbjct: 346 SNATWVPDNPSIDVGISTGLRYDYGKYYASKTFYDQNKGRRILWGWIGESDSEAADVQKG 405
Query: 343 WAGLQATPRNLWLD-KSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQA 401
W+ +Q PR + LD ++ + L+QWP+ EI+ LR + K+ + G++V + +A Q
Sbjct: 406 WSSVQGIPRTVVLDTRTHKNLVQWPVEEIKSLRLSSKKFDMTI-GPGTVVPVDVGSATQL 464
Query: 402 DVEISFQTTAFEKAEVLD--SIWTNPQFLC 429
D+E F+ + D S+ + +F C
Sbjct: 465 DIEAEFEIKTDDLKLFFDDDSVEADNKFSC 494
|
|
| UNIPROTKB|Q4KBP1 scrB "Sucrose-6-phosphate hydrolase" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 369 (135.0 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 108/362 (29%), Positives = 171/362 (47%)
Query: 48 YRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHD 103
YR YH PP WMNDPNG + ++G YH FYQ+ W + WGH+ S D+V+W
Sbjct: 32 YRLAYHLAPPVGWMNDPNGLVYFRGEYHVFYQHHPYSAQWGPMHWGHAKSRDLVHWEHLP 91
Query: 104 AAIYPSQPFDANSCWSGSVTILPGGNPAVLYTG---IDA-GN----KQVQNLAVPKNLSD 155
A+ P + +D + C+SGS ++ ++YTG + A G+ +QVQ LA +
Sbjct: 92 IALAPGEAYDRDGCFSGSAVVMDDVL-YLIYTGHTWLGAPGDERSIRQVQCLASSTD-GV 149
Query: 156 PYLKEWIKPPENPLMVPADQIDPG--SFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYR 213
+ K P++ A + PG FRDP W ++ W + +G++ D +LYR
Sbjct: 150 AFSKH------GPVIDRAPE--PGIMHFRDPKV-WRRGEQWW-MALGARQGDAPQLLLYR 199
Query: 214 SKDFVNWTKAEQSLYSTNQSG--MWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271
S D +WT +L +S MWECPD F + G D + P + N
Sbjct: 200 SGDLHHWTYLRCALQGQRESDGYMWECPDLFELD-----GCDVFLYSPQGLNPSGYDNWN 254
Query: 272 YQQDYYTIGTYNITTDTYIAEEGSFDDNSGLR-YDYGK-FYGSKTFFDSAKNRRILWGWI 329
Q+ Y +G + + G F + LR D+G FY ++T + RR+LW W+
Sbjct: 255 KFQNSYRMGLLD--------DRGYFSEGGELRELDHGHDFYAAQTLL-APDGRRLLWAWM 305
Query: 330 NESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGS 389
+ + + + W G + PR L ++G +L P E+ LR +Q ++E G+
Sbjct: 306 DMWDSPMPSQAQHWCGALSLPREL--SRNGERLRMRPARELAALRQSQRTLAIGVVESGN 363
Query: 390 MV 391
+
Sbjct: 364 CI 365
|
|
| UNIPROTKB|Q48BH6 scrB "Sucrose-6-phosphate hydrolase" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
Score = 361 (132.1 bits), Expect = 3.3e-38, Sum P(2) = 3.3e-38
Identities = 109/343 (31%), Positives = 156/343 (45%)
Query: 48 YRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHD 103
YR GYH PP+ WMNDPNG + ++G YH FYQ+ W + WGH+ S D+V+W
Sbjct: 27 YRPGYHLAPPAGWMNDPNGVVYFRGEYHVFYQHHPFDAKWGPMYWGHAKSADLVHWQHLP 86
Query: 104 AAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGI----DAGN----KQVQNLAVPKNLSD 155
A+ P FD + C+SGS + G A++YTG + G+ +QVQ LA + +
Sbjct: 87 IALAPGDDFDQDGCFSGSAVVC-GDTLALIYTGHTWLGEVGDELLIRQVQCLATSLDGIN 145
Query: 156 PYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSK 215
++K ++P P D I FRDP W D W +I G+++ D L LYRS
Sbjct: 146 -FVKHGAVI-DSP---PQDTII--HFRDPKV-WQQDDH-WYLIAGARLGDRPLLPLYRSV 196
Query: 216 DFVNWTKAEQSLYSTNQSG---MWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNY 272
D W S S+ G MWECPD F + G D + P N
Sbjct: 197 DLHAWEFV--SYVSSGNEGDGYMWECPDLFRLD-----GRDVLLYSPQGMPAQGYERLNK 249
Query: 273 QQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINE 331
Y +G I + F+ + D G FY ++T +A RR++W W++
Sbjct: 250 FHTGYRVGQ--------IDSQRQFNGGPFIELDNGHDFYAAQTLV-AADGRRLVWAWLDM 300
Query: 332 SSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLR 374
+ + W G+ PR L L + R L P E+ LR
Sbjct: 301 WESPTPTATHLWRGMLGLPRELEL-RDDR-LCVHPARELTALR 341
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q43089 | INV1_PEA | 3, ., 2, ., 1, ., 2, 6 | 0.5840 | 0.9461 | 0.9495 | N/A | no |
| A2X5P7 | INV1_ORYSI | 3, ., 2, ., 1, ., 2, 6 | 0.5107 | 0.9461 | 0.9133 | N/A | no |
| Q43866 | INV1_ARATH | 3, ., 2, ., 1, ., 2, 6 | 0.5820 | 0.9712 | 0.9263 | yes | no |
| P26792 | INV1_DAUCA | 3, ., 2, ., 1, ., 2, 6 | 0.5415 | 0.9479 | 0.8918 | N/A | no |
| Q0JDC6 | INV3_ORYSJ | 3, ., 2, ., 1, ., 2, 6 | 0.4927 | 0.9335 | 0.8873 | yes | no |
| Q70XE6 | 6FEH_BETVU | 3, ., 2, ., 1, ., 1, 5, 4 | 0.6052 | 0.9174 | 0.8432 | N/A | no |
| Q39693 | INV3_DAUCA | 3, ., 2, ., 1, ., 2, 6 | 0.5135 | 0.9533 | 0.9108 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| CWINV | SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (575 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GSVIVG00038290001 | SubName- Full=Chromosome undetermined scaffold_92, whole genome shotgun sequence; (196 aa) | • | • | 0.916 | |||||||
| GSVIVG00016378001 | SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (806 aa) | • | • | 0.916 | |||||||
| GSVIVG00028036001 | SubName- Full=Putative uncharacterized protein (Chromosome chr7 scaffold_42, whole genome shotg [...] (811 aa) | • | • | 0.915 | |||||||
| GSVIVG00033041001 | SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (808 aa) | • | • | 0.915 | |||||||
| GSVIVG00017795001 | SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (507 aa) | • | • | 0.903 | |||||||
| GSVIVG00038825001 | SubName- Full=Chromosome chr5 scaffold_98, whole genome shotgun sequence; (1031 aa) | • | 0.899 | ||||||||
| GSVIVG00036138001 | SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (281 aa) | • | 0.899 | ||||||||
| BG1 | SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (504 aa) | • | 0.899 | ||||||||
| GSVIVG00029420001 | SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (427 aa) | • | 0.899 | ||||||||
| GSVIVG00028135001 | SubName- Full=Chromosome chr7 scaffold_42, whole genome shotgun sequence; (865 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 557 | |||
| smart00640 | 437 | smart00640, Glyco_32, Glycosyl hydrolases family 3 | 1e-171 | |
| pfam00251 | 305 | pfam00251, Glyco_hydro_32N, Glycosyl hydrolases fa | 1e-133 | |
| cd08996 | 298 | cd08996, GH32_B_Fructosidase, Glycosyl hydrolase f | 6e-86 | |
| COG1621 | 486 | COG1621, SacC, Beta-fructosidases (levanase/invert | 2e-69 | |
| TIGR01322 | 445 | TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | 3e-51 | |
| cd08772 | 286 | cd08772, GH43_62_32_68, Glycosyl hydrolase familie | 2e-39 | |
| cd08995 | 280 | cd08995, GH32_Aec43_like, Glycosyl hydrolase famil | 4e-22 | |
| pfam08244 | 83 | pfam08244, Glyco_hydro_32C, Glycosyl hydrolases fa | 3e-16 | |
| cd08979 | 276 | cd08979, GH_J, Glycosyl hydrolase families 32 and | 3e-14 |
| >gnl|CDD|214757 smart00640, Glyco_32, Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Score = 491 bits (1265), Expect = e-171
Identities = 191/473 (40%), Positives = 257/473 (54%), Gaps = 50/473 (10%)
Query: 53 HFQPPSSWMNDPNGPMIYKGIYHFFYQY----KLWDTVVWGHSTSTDMVNWTPHDAAIYP 108
HFQPP WMNDPNG + YKG YH FYQY +W + WGH+ S D+V+WT A+ P
Sbjct: 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGAVWGNIHWGHAVSKDLVHWTHLPVALAP 60
Query: 109 SQPFDANSCWSGSVTILPGGNPAVLYTGIDAG--NKQVQNLAVPKNLSDPYLKEWIKPPE 166
+ +D+N +SGS I PG N ++LYTG A N QVQ A SD W K
Sbjct: 61 DEWYDSNGVFSGSAVIDPG-NLSLLYTGNVAIDTNVQVQRQAYQCAASDDLGGTWTKYDG 119
Query: 167 NPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIG-SKINDTGLAILYRSKDFVNWTKAEQ 225
NP++ P FRDP W DK W ++IG S + G+A+LYRS D NWT +
Sbjct: 120 NPVLTPPPGGGTEHFRDPKVFWYDGDK-WYMVIGASDEDKRGIALLYRSTDLKNWTLLSE 178
Query: 226 SLYST--NQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYN 283
L+S + GMWECPD FP+ + G KHVLKVS +YY +G ++
Sbjct: 179 FLHSLLGDTGGMWECPDLFPLPGE----------GDTSKHVLKVSPQGGSGNYYFVGYFD 228
Query: 284 ITTDTYIAEEGSFDDNSGLRYDYG-KFYGSKTFFDSAKNRRILWGWINESSTRSDNLK-K 341
DT+ ++ D GLR DYG FY S+TF+D NRRIL GW+ + +D++ K
Sbjct: 229 -GDDTFTPDDP-VDTGHGLRLDYGFDFYASQTFYDPDGNRRILIGWMGNWDSYADDVPTK 286
Query: 342 GWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQ- 400
GWAG + PR L LD +G +L+QWP+ E+E LR N+ + L+ GS+ + G+TA+
Sbjct: 287 GWAGALSLPRELTLDLTGGKLLQWPVEELESLR-NKKELLNLTLKNGSVTELLGLTASGD 345
Query: 401 -ADVEISFQTTAFEKAEVLDSIWTNPQFLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHI 459
++E+SF+ + PFGLLV AS L E TAV++ + G
Sbjct: 346 SYEIELSFE--------------VDSGTAGPFGLLVRASKDLSEQTAVYYDVSNGT---- 387
Query: 460 VLMCSDQSRSS-INDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGG 511
+C D+ S D+ K GAF+ LDP E LS+R L+DRS VE F GG
Sbjct: 388 --LCLDRRSSGGSFDEAFKGVRGAFVPLDP-GETLSLRILVDRSSVEIFANGG 437
|
Length = 437 |
| >gnl|CDD|215819 pfam00251, Glyco_hydro_32N, Glycosyl hydrolases family 32 N-terminal domain | Back alignment and domain information |
|---|
Score = 388 bits (1000), Expect = e-133
Identities = 139/326 (42%), Positives = 179/326 (54%), Gaps = 33/326 (10%)
Query: 53 HFQPPSSWMNDPNGPMIYKGIYHFFYQY----KLWDTVVWGHSTSTDMVNWTPHDAAIYP 108
HFQPP WMNDPNG + YKG YH FYQY +W WGH+ S D+V+W A+ P
Sbjct: 1 HFQPPKGWMNDPNGLVYYKGEYHLFYQYNPFGAVWGNKHWGHAVSKDLVHWEHLPVALAP 60
Query: 109 SQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENP 168
+ +D+N C+SGS +LP N +LYTG + QVQ LA + + W K P NP
Sbjct: 61 DEWYDSNGCFSGSAVVLP-DNLVLLYTGNTDRSTQVQCLAYSADDG----RTWTKYPGNP 115
Query: 169 LMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND-TGLAILYRSKDFVNWTKAEQSL 227
+++ FRDP AW PD W +++G++ ND G A+LYRSKD NW + L
Sbjct: 116 VIINPPPGYTKHFRDPKVAWYEPDGKWYMVLGAQDNDKRGKALLYRSKDLKNWELLGELL 175
Query: 228 YS-TNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQ---QDYYTIGTYN 283
+S + GMWECPD FPV K V KHVLK S YQ QDYY IGT++
Sbjct: 176 HSVPDGGGMWECPDLFPVDGKDNGPV---------KHVLKFSPQGYQNGYQDYYFIGTFD 226
Query: 284 ITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTRSDNL--K 340
DT+ R DYG FY S+TF+D RRIL GW+ E + +D++
Sbjct: 227 ADGDTFTPP-------DEQRLDYGFDFYASQTFYDPDGRRRILIGWMGEWDSEADDVPTT 279
Query: 341 KGWAGLQATPRNLWLDKSGRQLMQWP 366
KGWAG + PR L L G +L+QWP
Sbjct: 280 KGWAGALSIPRELTLKDEGGKLLQWP 305
|
This domain corresponds to the N-terminal domain of glycosyl hydrolase family 32 which forms a five bladed beta propeller structure. Length = 305 |
| >gnl|CDD|185737 cd08996, GH32_B_Fructosidase, Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Score = 268 bits (686), Expect = 6e-86
Identities = 116/326 (35%), Positives = 149/326 (45%), Gaps = 45/326 (13%)
Query: 60 WMNDPNGPMIYKGIYHFFYQY----KLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDAN 115
WMNDPNG + + G YH FYQY +W + WGH+TS D+V+W A+ P P+D+
Sbjct: 2 WMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSG 61
Query: 116 SCWSGSVTILPGGNPAVLYTGI---DAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP 172
C+SGS + G + YTG D G +Q Q LA S + + K NP++ P
Sbjct: 62 GCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAY----STDDGRTFTKYEGNPVIPP 117
Query: 173 ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND-TGLAILYRSKDFVNWTKAEQSLYSTN 231
D FRDP W D W +++G+ D TG +LYRS D NW + L S
Sbjct: 118 PD-GYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRILLYRSDDLKNWEYLGELLTSLG 174
Query: 232 QSG-MWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSL------SNYQQDYYTIGTYNI 284
G MWECPD FP+ + K VL S N Y +G ++
Sbjct: 175 DFGYMWECPDLFPLDVEG-------------KWVLIFSPQGLEPEGNGSGTGYLVGDFDG 221
Query: 285 TTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGW 343
TT T FD DYG FY +TF D RRIL GW+ + GW
Sbjct: 222 TTFT-------FDHTEFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGW 273
Query: 344 AGLQATPRNLWLDKSGRQLMQWPISE 369
AG PR L L GR L Q P+ E
Sbjct: 274 AGCLTLPRELSLKDGGR-LYQRPVRE 298
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 298 |
| >gnl|CDD|224536 COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 231 bits (590), Expect = 2e-69
Identities = 141/504 (27%), Positives = 214/504 (42%), Gaps = 84/504 (16%)
Query: 40 SSSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTD 95
S S+ PYR YHF PP+ W+NDPNG + + G YH FYQY WGH+ S D
Sbjct: 20 SESVAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKD 79
Query: 96 MVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTG----IDAGNKQVQNLAVPK 151
+V+W A+ P +D++ C+SGS ++ GN ++ YTG + +Q Q +A +
Sbjct: 80 LVHWEHLPIALAPDDDYDSHGCYSGSA-VVDDGNLSLFYTGNVRDSNGIRQQTQCIAYSE 138
Query: 152 NLSDPYLKEWIKPPENPLM-VPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND-TGLA 209
+ + K NP++ P FRDP W W +++G++ D G
Sbjct: 139 DGGT-----FEKYSGNPIIDQPEGYTPH--FRDPKVVW-DEGGKWWMMLGAQGEDLKGTI 190
Query: 210 ILYRSKDFVNWTKAEQSLYSTNQSG---MWECPDFF-----PVSTKSPKGVDTSVIGPNI 261
+LY S D NW + Q G MWECPD F V P+G+ + +
Sbjct: 191 LLYESDDLKNWQFT--GEFGLEQGGLGYMWECPDLFELDGEDVLLFWPQGLSINGGEYDN 248
Query: 262 KHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAK 320
+ Q Y +G ++ +E DD D+G FY +TF D
Sbjct: 249 IY----------QSGYFVGDFDG-------KEFKLDDGQFRELDFGFDFYAPQTFLD-PD 290
Query: 321 NRRILWGWIN--ESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQV 378
RRIL GW+ + + + +GW G PR L L +L Q P+ E+E LR +
Sbjct: 291 GRRILIGWMGNWDYTNNYPTIDEGWRGAMTLPRELTL--EDGKLYQTPVRELESLRKPEE 348
Query: 379 KWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCPFGLLVLAS 438
L G + + D A+E LD IWT+ S
Sbjct: 349 AAHNTTLS-----GNSKLELPSGD--------AYE--LDLDLIWTDA-----------TS 382
Query: 439 NGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSL 498
GL+ + + ++ + L D+S S + D + F++ K+ +R
Sbjct: 383 FGLELRMGLNLVGYDVENETLTL---DRSDSPLFTVQDGETRECFIENG---AKVHLRIF 436
Query: 499 IDRSIVESFGGGGKACITARIYPT 522
+D S VE F G+ T+RI+PT
Sbjct: 437 VDNSSVEIFINDGEKVFTSRIFPT 460
|
Length = 486 |
| >gnl|CDD|233357 TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Score = 181 bits (461), Expect = 3e-51
Identities = 136/500 (27%), Positives = 196/500 (39%), Gaps = 88/500 (17%)
Query: 45 SQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWT 100
+R +H QP + +NDPNG + +KG YH FYQ+ + WGH TS D+V+W
Sbjct: 10 QSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWE 69
Query: 101 PHDAAIYPSQPFDANSCWSGS-VTILPGGNPAVLYTG----IDAGNKQVQNLAV-PKNLS 154
A+ P P+D++ C+SGS V G ++YTG D + Q LA +
Sbjct: 70 DEGVALAPDDPYDSHGCYSGSAVDN--NGQLTLMYTGNVRDSDWNRESYQCLATMDDDGH 127
Query: 155 DPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRS 214
+ ++ FRDP W + VI + G +LYRS
Sbjct: 128 -------FEKFGIVVIELPPAGYTAHFRDPKV-WKHNGHWYMVIGAQTETEKGSILLYRS 179
Query: 215 KDFVNWTKAEQSLYSTNQSG-----MWECPDFFPVSTK-----SPKGVDTSVIGPNIKHV 264
KD NWT + L MWECPD F + + SP+G+D S +
Sbjct: 180 KDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLDGQDVLLFSPQGLDAS----GYDY- 234
Query: 265 LKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYG-KFYGSKTFFDSAKNRR 323
N Q+ Y +G + + F DYG FY +TF RR
Sbjct: 235 -----QNIYQNGYIVGQLDYEAPEFT-HGTEF-----HELDYGFDFYAPQTFLAP-DGRR 282
Query: 324 ILWGWIN--ESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWP 381
IL W+ E +D GWA PR L L K G +L+Q P+ E++ LR
Sbjct: 283 ILVAWMGLPEIDYPTDR--DGWAHCMTLPRELTL-KDG-KLVQTPLRELKALRTE----- 333
Query: 382 AKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCPFGLLVLASNGL 441
E ++ G T + E EK F L + +N
Sbjct: 334 ----EHINVFGDQEHTLPGLNGEFELILD-LEKDSA-------------FELGLALTNKG 375
Query: 442 QEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDR 501
+E D V + D+ S +D T L P +K+S+ ID+
Sbjct: 376 EETLLTIDA-----DEGKVTL--DRRSSGNLEDYGGTRS-CPL---PNTKKVSLHIFIDK 424
Query: 502 SIVESFGGGGKACITARIYP 521
S VE F G+ +T+RI+P
Sbjct: 425 SSVEIFINDGEEVMTSRIFP 444
|
[Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 445 |
| >gnl|CDD|185718 cd08772, GH43_62_32_68, Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Score = 144 bits (366), Expect = 2e-39
Identities = 66/307 (21%), Positives = 101/307 (32%), Gaps = 35/307 (11%)
Query: 62 NDPNGPMIYKGIYHFFYQYKLWDT-VVWGHSTSTDMVNWTPHDAAI----YPSQPFDANS 116
DPN + Y G Y+ F+ + H+TS D+VNWT H A+ P D+
Sbjct: 1 ADPN-LIKYNGTYYIFFSGDDKNGNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGG 59
Query: 117 CWSGSVTILPGGNPAVLYTGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQ 175
W+ S+ + G + YT + N+Q +A ++ + P+ P
Sbjct: 60 IWAPSIVYIENGKFYLYYTDVSFTKNQQTIGVATAEDGNGPWTDYIGGPVLPD---NPPA 116
Query: 176 IDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNW--TKAEQSLYSTNQS 233
D +FRDP K + V ++ G LY S D W AE +
Sbjct: 117 ADVSNFRDPFVFEDDDGKWYLVFGSGDHHNFGGIFLYESDDDTTWKKGSAELLISEGEGG 176
Query: 234 GMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQD------YYTIGTYNITTD 287
E P N K+ L S++ + Y +
Sbjct: 177 KQIEGPGLLKK---------------NGKYYLFYSINGTGRVDSTYSIGYARSESDTGPY 221
Query: 288 TYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQ 347
++ +G Y + F D A R +L +D GW
Sbjct: 222 VPKSDTSGGLSLTGGNDGGVGPYHAAAFND-AGGRVVLVYHAYNVQ-YADAPTYGWGRSL 279
Query: 348 ATPRNLW 354
A PR LW
Sbjct: 280 AIPRLLW 286
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 comprises sucrose-6-phosphate hydrolases, invertases, inulinases, levanases, eukaryotic fructosyltransferases, and bacterial fructanotransferases while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Members of this clan are retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) that catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. Structures of all families in the two clans manifest a funnel-shaped active site that comprises two subsites with a single route for access by ligands. Length = 286 |
| >gnl|CDD|185736 cd08995, GH32_Aec43_like, Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 4e-22
Identities = 72/288 (25%), Positives = 109/288 (37%), Gaps = 46/288 (15%)
Query: 72 GIYHFFYQYKLWDTVV------WGHSTSTDMVNWTPHDAAI-YPSQPFDANSCWSGSVTI 124
G +H FY + + W T+ D+VN+ H AI D ++ +GSV I
Sbjct: 10 GTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSV-I 68
Query: 125 LPGGNPAVLYTG--IDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFR 182
G YTG +D KQV A +L W K PE L+ + + +R
Sbjct: 69 KGEGTYHAFYTGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWR 123
Query: 183 DPTTAWIGPDKIWRVIIGSKIND-----TGLAILYRSKDFVNWTKAEQSLYSTNQSGMWE 237
DP W + + +++ +++ D G L+ SKD NW E Y+ M E
Sbjct: 124 DPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDLKNWEYEE-PFYAPGLYFMPE 182
Query: 238 CPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFD 297
CPD F + S N K +VS + ++ +FD
Sbjct: 183 CPDLF--KMGDWWYLVYSEFSENRKTHYRVSK-------------SPFGPWRAPDDDTFD 227
Query: 298 DNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAG 345
+ FY +KT D RR L+GW+ + D+ W G
Sbjct: 228 GRA--------FYAAKTASD--GTRRFLFGWVPTKAGNDDDGNWEWGG 265
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. Length = 280 |
| >gnl|CDD|219762 pfam08244, Glyco_hydro_32C, Glycosyl hydrolases family 32 C terminal | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 3e-16
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 430 PFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPV 489
FGLL+ ASN E T + + D+ L+ D+S S + K +G+ + P+
Sbjct: 8 SFGLLLRASNDGSEQTLIGY------DKSKGLLTVDRSNSG--NGVFKEKFGSGVRAAPL 59
Query: 490 HEK--LSIRSLIDRSIVESFGGGG 511
EK LS+R +DRS VE F G
Sbjct: 60 PEKDTLSLRIFVDRSSVEVFANDG 83
|
This domain corresponds to the C terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module. Length = 83 |
| >gnl|CDD|185720 cd08979, GH_J, Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 3e-14
Identities = 59/285 (20%), Positives = 92/285 (32%), Gaps = 47/285 (16%)
Query: 63 DPNGPMIYKGIYHFFYQYKLWD--TVVWGHSTSTDMVNWTPHDAAIYPSQP--FDANSCW 118
+P + +++ D T G ++S D WT A + P P FD W
Sbjct: 8 NPAVVVGKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVW 67
Query: 119 SGSVTILPGGNPAVLYTGIDA--GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQI 176
+ SV P G + YTG D G Q LA K+L W K NP+ +
Sbjct: 68 TPSVVRDPDGTYRMFYTGYDRPKGAVQRIGLATSKDLIH-----WTKHGPNPVPRWYESG 122
Query: 177 DPG-----SFRDPTTAWIGPDKIWRVIIGSKINDTGLAI-LYRSKDFVNWTKAEQ--SLY 228
+PG ++RDP WR+ G++ D AI L S D ++WT
Sbjct: 123 NPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDLIHWTPVPPPPGPR 182
Query: 229 STNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDT 288
+ G E P + + + L Y+ + T
Sbjct: 183 TGYDDGQLEVPQVVKI---------------DGRWYL----------LYSGRNEDAKTGY 217
Query: 289 YIAEEGSFDDNSGLRY---DYGKFYGSKTFFDSAKNRRILWGWIN 330
+ D Y ++ D +L G++
Sbjct: 218 RVGTALFGPGRPLTLAELLDRTDLYAARPVPDGEGGGVVLEGFVQ 262
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 276 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 557 | |||
| KOG0228 | 571 | consensus Beta-fructofuranosidase (invertase) [Car | 100.0 | |
| COG1621 | 486 | SacC Beta-fructosidases (levanase/invertase) [Carb | 100.0 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 100.0 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 100.0 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 100.0 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 100.0 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 100.0 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 100.0 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 100.0 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 99.94 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 99.85 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 99.83 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.82 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 99.79 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.79 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 99.78 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 99.72 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 99.69 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 99.65 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.63 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 99.61 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.57 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 99.5 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 99.49 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 99.45 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 99.42 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 99.4 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 99.35 | |
| PF08244 | 86 | Glyco_hydro_32C: Glycosyl hydrolases family 32 C t | 99.32 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 99.32 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 99.26 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 99.25 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.21 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 99.17 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 99.14 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 99.13 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 99.13 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 99.1 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.07 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 99.06 | |
| PF02435 | 428 | Glyco_hydro_68: Levansucrase/Invertase; InterPro: | 98.95 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 98.9 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 98.88 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 98.68 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 98.63 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 98.59 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 98.56 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 98.52 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 98.49 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 98.41 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 98.35 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 98.32 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 98.27 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 98.22 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 98.16 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 98.06 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 98.04 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 98.04 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 98.02 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 98.0 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 97.92 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 97.91 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 97.9 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 97.89 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 97.67 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 97.65 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 97.64 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 97.61 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 97.57 | |
| PF03664 | 271 | Glyco_hydro_62: Glycosyl hydrolase family 62 ; Int | 97.48 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 97.35 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 97.31 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 96.85 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 96.74 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 96.63 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 96.44 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 96.11 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 94.5 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 93.5 | |
| PF13810 | 316 | DUF4185: Domain of unknown function (DUF4185) | 92.0 | |
| PF13859 | 310 | BNR_3: BNR repeat-like domain; PDB: 3B69_A. | 90.83 | |
| COG3940 | 324 | Predicted beta-xylosidase [General function predic | 90.76 | |
| COG1621 | 486 | SacC Beta-fructosidases (levanase/invertase) [Carb | 88.51 | |
| PF02435 | 428 | Glyco_hydro_68: Levansucrase/Invertase; InterPro: | 84.65 |
| >KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-105 Score=824.27 Aligned_cols=545 Identities=56% Similarity=0.999 Sum_probs=489.8
Q ss_pred ccchhHHHHHHHHhHhhhh-hhccccccCCccccccCCCCCCCCCCcccccccCCCCCccCCcceEEECCEEEEEEEEe-
Q 008686 4 SSICLFIFFALFLGHVFVK-LEASQHVYRTLQTCQSFSSSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK- 81 (557)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~- 81 (557)
+.|.|.....|++.| ++| +.|.-.++.-||.- + .++..+.++||.|||+|+.|||||| +|.+|+||||||||
T Consensus 7 ~~~~l~l~~~~~~~~-~vk~~da~~~~~~~l~~~-s-~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP 80 (571)
T KOG0228|consen 7 CLVLLLLLVTLNLTN-YVKGLDAFHQNYAGLQSE-S-PSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNP 80 (571)
T ss_pred hHHHHHHHHHHhhhh-hhhhhhhhhhhhhhhccc-C-ccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCC
Confidence 345566677788899 665 55666666666322 2 6778889999999999999999999 79999999999999
Q ss_pred ---cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCCCcceEEEEEEcCCCCCcc
Q 008686 82 ---LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYL 158 (557)
Q Consensus 82 ---~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l 158 (557)
.||+.+||||+|+||+||+.+|+||.|+.++|..|||||||+++++|++.++|||.+....|+|.+|+..|.+||.|
T Consensus 81 ~gavwg~ivWGHavSkDLinW~~lp~Ai~Ps~~~ding~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l 160 (571)
T KOG0228|consen 81 KGAVWGNIVWGHAVSKDLINWEALPPAIAPSEWFDINGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQL 160 (571)
T ss_pred CCceeeeeEeeeecchhhccccccCcccCCCCccccCccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhh
Confidence 79999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred ceeecCCCCceEecC--CCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccccccCCCCCce
Q 008686 159 KEWIKPPENPLMVPA--DQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMW 236 (557)
Q Consensus 159 ~~w~k~~~~Pvi~~p--~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ 236 (557)
+.|.|.+++|++.++ .+++...||||+++|++++|+|+|++|+..+.+|.+.+|+|.|+++|+..+.|++....++||
T Consensus 161 ~~w~k~~gnp~~~p~~V~~in~s~FRDPttaW~~~dgkWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmw 240 (571)
T KOG0228|consen 161 IAWSKDGGNPFMKPDKVLGINSSQFRDPTTAWFGQDGKWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMW 240 (571)
T ss_pred heeecCCCceeeccccccCCChhhccCCceeeecCCCcEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceE
Confidence 999999999999887 677788999999999999999999999998888999999999999999999889888889999
Q ss_pred eecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEEEEecCCCeEeecCCccCCCCccccccCCCccceeee
Q 008686 237 ECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFF 316 (557)
Q Consensus 237 ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~fYA~qt~~ 316 (557)
||||||++..+|.+++.++-.+...|||+..|..+++..+|+||+||+.+.+|+|+..+.+.....+.|||.|||.|||.
T Consensus 241 ECPdffpVs~tg~~g~d~s~~~~~nkhvlkasl~gt~~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFf 320 (571)
T KOG0228|consen 241 ECPDFFPVSITGTDGLDWSLFGSINKHVLKASLGGTSNDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFF 320 (571)
T ss_pred ECCCcEEecccCCCCceEEEeccccccccccccCCceeEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhc
Confidence 99999999998999998776666569999999988889999999999988899999876654344578999999999999
Q ss_pred eCCCCcEEEEEEecCCCCCCCCCCCCccccccccEEEEEec-cCCeEEecchHHHHhhhcCccccCCeEecCCceEEecc
Q 008686 317 DSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDK-SGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITG 395 (557)
Q Consensus 317 d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~-~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~l~~ 395 (557)
|..++|||+|||++++++..+..+.||+|+||+||+++|+. .|+.|.|.|++|++.||...+...+..++.+...++.+
T Consensus 321 ds~~~rrIlwgWa~es~~~~dd~~kgw~g~qtipRki~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~ 400 (571)
T KOG0228|consen 321 DSVKGRRILWGWASESDYTNDDPTKGWRGLQTIPRKIWLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSG 400 (571)
T ss_pred cccCCcEEEEEecccCcccccchhcccccccccceEEEeeccCCCcccccchheeecccccccCccccccCCceeEEecc
Confidence 99899999999999999988888999999999999999997 67899999999999999998877777788888888899
Q ss_pred cccceeEEEEEEEecccccccccccccCCCCccc------------ceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEe
Q 008686 396 ITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMC 463 (557)
Q Consensus 396 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------------~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~ 463 (557)
+++.+.++|++|++.+.+.+.+++.+|.++...| +||+.++++.|.+|+|.++|.+.+......+++|
T Consensus 401 ~t~~q~dvev~f~~~~Leka~~~~~~~t~~~~~c~~~~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~~~~~v~~c 480 (571)
T KOG0228|consen 401 ITAAQADVEVTFEVEDLEKAIVIEPSWTDPQFLCLTGGSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAKKKYVVLMC 480 (571)
T ss_pred cccccccceEEEEecccccccccCccccccceeeecCCcccccCCCcceEEEEeecCcccceeeeEEEeecCCcceeEEe
Confidence 9999999999999987777888888886443333 7999999999999999999999886656678899
Q ss_pred ecCCCCCCCCCCCCCcceeEEeecCCCCeEEEEEEEeCCeEEEEecCCceEEEEEeecCCCcCCceEEEEEecCceeEEE
Q 008686 464 SDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNI 543 (557)
Q Consensus 464 vDr~rS~~~~~~~~~~~~~~~~~~~~~~~~~LrIfvD~S~vEVFvNdG~~~lTsRiyp~~~~~~~~~i~~~~~g~~~~~~ 543 (557)
.|.+||++..+.+++.+++.+++.+ +++++||++||+|+||.|.|+|+.|+|+|+||..++.....+.+|++|.-.+.+
T Consensus 481 sd~~~sSl~~d~~k~~~~afvdv~~-~~~islr~LiDhsivEsyg~~G~t~iTsrvyp~~ai~~~~~lf~fn~g~~~v~v 559 (571)
T KOG0228|consen 481 SDQSRSSLAEDNYKPSIGAFVDVYP-HQKISLRSLIDHSIVESYGNGGKTVITSRVYPTLAIGEGAHLFVFNNGSQLVNV 559 (571)
T ss_pred ccCCCccccccccccceeeEEEecC-CCccchhhhhhhhhHHHhccCCcEEEEeeeeeeecccccceEEEecccccceEE
Confidence 9999999998889999999999876 899999999999999999999999999999999987777889999988878899
Q ss_pred EEEEeeccCccc
Q 008686 544 TSLRAWSMKKAQ 555 (557)
Q Consensus 544 ~~l~~w~m~~~~ 555 (557)
.++.+|+|++++
T Consensus 560 ~sl~aw~m~~~~ 571 (571)
T KOG0228|consen 560 TSLNAWSMKNAQ 571 (571)
T ss_pred EEeehhhcccCC
Confidence 999999999874
|
|
| >COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-97 Score=783.34 Aligned_cols=445 Identities=28% Similarity=0.530 Sum_probs=349.5
Q ss_pred CCCCCCcccccccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceE
Q 008686 43 ITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCW 118 (557)
Q Consensus 43 ~~~~~~rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~ 118 (557)
...++|||.|||+||.||||||||++|++|+|||||||+ .||+||||||+|+|||||+++|+||.|+.++|.+|||
T Consensus 23 ~~~~~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~y 102 (486)
T COG1621 23 VAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGCY 102 (486)
T ss_pred ccCCCCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCCccccCCce
Confidence 555899999999999999999999999999999999999 7899999999999999999999999999999999999
Q ss_pred eeeEEEccCCeEEEEEeeecC----CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCe
Q 008686 119 SGSVTILPGGNPAVLYTGIDA----GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKI 194 (557)
Q Consensus 119 SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~ 194 (557)
|||||++ +|.+.+||||+.+ .+.+.||+|+|+|+ .+|+|+.++||+..|+++ +.|||||||+|+ ++++
T Consensus 103 SGSAV~~-~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~-~~~~ 174 (486)
T COG1621 103 SGSAVVD-DGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVWD-EGGK 174 (486)
T ss_pred eeeEEEe-CCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCccccc-CCCc
Confidence 9999986 9999999999875 36789999999995 578887678888888886 899999998888 7889
Q ss_pred EEEEEeeec-CCccEEEEEEeCCCCCCEEccccccc-CCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec--
Q 008686 195 WRVIIGSKI-NDTGLAILYRSKDFVNWTKAEQSLYS-TNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS-- 270 (557)
Q Consensus 195 ~~m~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~~~~-~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~-- 270 (557)
|||++||+. +..|+|+||+|+||++|++.|++... ...++||||||||+|+ +.+.+.+ |++..+.+
T Consensus 175 ~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~--~~~~~~~--------~pqg~~~~~~ 244 (486)
T COG1621 175 WWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELD--GEDVLLF--------WPQGLSINGG 244 (486)
T ss_pred EEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEec--CcCceEE--------cceeeecCCC
Confidence 999999987 56899999999999999999976665 3457799999999999 5445444 44444443
Q ss_pred ---CCceeEEEEEEEecCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCC--CCCCCCCcc
Q 008686 271 ---NYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTR--SDNLKKGWA 344 (557)
Q Consensus 271 ---~~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~--~~~~~~gW~ 344 (557)
+...++|++|+||+. +|.+... .+++||+|+ |||||||.++ +||||++|||++|++. .|+..++|+
T Consensus 245 ~~~n~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~w~ 316 (486)
T COG1621 245 EYDNIYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEGWR 316 (486)
T ss_pred cCCCcceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccCcC
Confidence 245689999999986 5665542 368999999 9999999985 7999999999999986 667678999
Q ss_pred ccccccEEEEEeccCCeEEecchHHHHhhhcCccccCCeEecCCceEEecccccceeEEEEEEEecccccccccccccCC
Q 008686 345 GLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTN 424 (557)
Q Consensus 345 g~ltlPReL~l~~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 424 (557)
|||||||||+|. +| +|+|+|++||++||.+...+.+..++.. ..+....+.++++++.+...
T Consensus 317 ~~mTlpRel~l~-~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~--~~l~~~~~~~~~l~~~~~~~-------------- 378 (486)
T COG1621 317 GAMTLPRELTLE-DG-KLYQTPVRELESLRKPEEAAHNTTLSGN--SKLELPSGDAYELDLDLIWT-------------- 378 (486)
T ss_pred ccceeeEEEEEc-CC-eEEecchHHHHhhhcccccccccccccc--eeeeccCCccEEEEEEeecc--------------
Confidence 999999999995 56 7999999999999999666666555544 22333334555554333211
Q ss_pred CCcccceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCCCCCCcceeEEeecCC-CCeEEEEEEEeCCe
Q 008686 425 PQFLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPV-HEKLSIRSLIDRSI 503 (557)
Q Consensus 425 ~~~~~~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~~~~~~~~~~~~~~~~-~~~~~LrIfvD~S~ 503 (557)
..+.+|+.++.+.. .+.++.. +. .+++||++|. . .....+..+.+.+. ..+++||||+|+|+
T Consensus 379 --~~~~~~~~l~~~~~-----~~~~~~~---~~---~l~ldR~~s~-~---f~~~~~~~r~~~~~~~~~v~l~if~D~ss 441 (486)
T COG1621 379 --DATSFGLELRMGLN-----LVGYDVE---NE---TLTLDRSDSP-L---FTVQDGETRECFIENGAKVHLRIFVDNSS 441 (486)
T ss_pred --ccceEEEEeecCcc-----eeccccc---cc---eEEEeccccc-c---ccccCCceeeeccCCCceEEEEEEEeCCe
Confidence 12357888775432 3444432 12 2467999881 1 11122223333333 34489999999999
Q ss_pred EEEEecCCceEEEEEeecCCCcCCceEEEEEecCceeEEEEEEEeeccCc
Q 008686 504 VESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKK 553 (557)
Q Consensus 504 vEVFvNdG~~~lTsRiyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~m~~ 553 (557)
||||+|+|+.|+|+||||... ..+|.+.+... .+.+. .++|.+++
T Consensus 442 vEiF~NdGe~v~T~rifp~~~---~~~i~l~~~~g-~~~~~-~~~~~l~~ 486 (486)
T COG1621 442 VEIFINDGEKVFTSRIFPTPD---ANGISLYSDQG-VAVVQ-NTIWPLKS 486 (486)
T ss_pred EEEEEcCCceEEEEEecCCCc---ccceEEEccCc-eEEEE-eeeeccCC
Confidence 999999999999999999976 34444444433 23333 38898875
|
|
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-88 Score=734.79 Aligned_cols=412 Identities=29% Similarity=0.540 Sum_probs=324.9
Q ss_pred CCCCCCcccccccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceE
Q 008686 43 ITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCW 118 (557)
Q Consensus 43 ~~~~~~rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~ 118 (557)
..+++|||+|||+|+.||||||||++|++|+||||||++ .||+++||||+|+|||||+++|+||.|+..+|+.|||
T Consensus 8 ~~~~~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~ 87 (445)
T TIGR01322 8 ALQSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCY 87 (445)
T ss_pred hccCCcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCceE
Confidence 456799999999999999999999999999999999998 6899999999999999999999999999999999999
Q ss_pred eeeEEEccCCeEEEEEeeecC----CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCe
Q 008686 119 SGSVTILPGGNPAVLYTGIDA----GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKI 194 (557)
Q Consensus 119 SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~ 194 (557)
||||++. +|+++|||||+.+ .+.+.|++|+|+|+ .+|+|.. +|||.+++.....+||||+| |+ .+|+
T Consensus 88 sGsav~~-~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~ 158 (445)
T TIGR01322 88 SGSAVDN-NGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGH 158 (445)
T ss_pred ECeEEee-CCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCE
Confidence 9999974 9999999999753 24678999999885 5899974 59997654434679999996 55 4689
Q ss_pred EEEEEeeec-CCccEEEEEEeCCCCCCEEcccccccC-----CCCCceeecceEEecCCCCCCeeecccCCceeEEEEEe
Q 008686 195 WRVIIGSKI-NDTGLAILYRSKDFVNWTKAEQSLYST-----NQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVS 268 (557)
Q Consensus 195 ~~m~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~~~~~-----~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s 268 (557)
|||++|++. +..|++++|+|+||++|++.+.+.... ..+.|||||+||+|+ | ||||++|
T Consensus 159 ~~M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~-------------k~vL~~s 223 (445)
T TIGR01322 159 WYMVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--G-------------QDVLLFS 223 (445)
T ss_pred EEEEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--C-------------cEEEEEe
Confidence 999999986 457899999999999999998654332 245699999999998 5 7888877
Q ss_pred ecCC----------ceeEEEEEEEecCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCCCC
Q 008686 269 LSNY----------QQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTRSD 337 (557)
Q Consensus 269 ~~~~----------~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~~~ 337 (557)
..+. ..+.|++|+||..+.+|++++. ++.||+|+ |||||+|.++ +|||||||||++|+...+
T Consensus 224 ~~g~~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~ 296 (445)
T TIGR01322 224 PQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYP 296 (445)
T ss_pred ccccCcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCC
Confidence 5431 2367999999987789987643 57899999 9999999986 699999999999987666
Q ss_pred CCCCCccccccccEEEEEeccCCeEEecchHHHHhhhcCccccCCeEecCCceEEecccccceeEEEEEEEecccccccc
Q 008686 338 NLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEV 417 (557)
Q Consensus 338 ~~~~gW~g~ltlPReL~l~~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~ 417 (557)
+.+.+|+|+|||||+|+|+ +| +|+|+|++|+++||..... ... ......+.... .+++|+++++..
T Consensus 297 ~~~~~W~g~lslpR~l~l~-~g-~L~~~Pv~el~~lr~~~~~---~~~-~~~~~~~~~~~-~~~~l~~~~~~~------- 362 (445)
T TIGR01322 297 TDRDGWAHCMTLPRELTLK-DG-KLVQTPLRELKALRTEEHI---NVF-GDQEHTLPGLN-GEFELILDLEKD------- 362 (445)
T ss_pred CccCCcccccccCEEEEEe-CC-eEEEEEhHHHHHHhcCccc---ccc-ccccccccCCC-ceEEEEEEecCC-------
Confidence 6678999999999999997 67 7999999999999986542 011 11111222221 244444443211
Q ss_pred cccccCCCCcccceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCCCCCCcceeEEeecC-CCCeEEEE
Q 008686 418 LDSIWTNPQFLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDP-VHEKLSIR 496 (557)
Q Consensus 418 ~~~~~~~~~~~~~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~~~~~~~~~~~~~~~-~~~~~~Lr 496 (557)
....+||.+ .+ .++.+.|.|+..+ +. +.+||++|+.... .+..+.+.+ .++.++||
T Consensus 363 ---------~~~~~~l~~-~~--~~~~~~i~~~~~~---~~---l~~dr~~~~~~~~-----~~~~~~~~~~~~~~~~l~ 419 (445)
T TIGR01322 363 ---------SAFELGLAL-TN--KGEETLLTIDADE---GK---VTLDRRSSGNLED-----YGGTRSCPLPNTKKVSLH 419 (445)
T ss_pred ---------CccEEEEEE-eC--CCCeEEEEEECcC---CE---EEEEccCCCCcCC-----ccceEEEEcCCCCeEEEE
Confidence 123588888 44 3467999998653 32 3569988863211 111222222 35789999
Q ss_pred EEEeCCeEEEEecCCceEEEEEeecC
Q 008686 497 SLIDRSIVESFGGGGKACITARIYPT 522 (557)
Q Consensus 497 IfvD~S~vEVFvNdG~~~lTsRiyp~ 522 (557)
||||+|+||||||||+.|||+||||.
T Consensus 420 i~vD~s~vEvFvn~G~~~~t~riyp~ 445 (445)
T TIGR01322 420 IFIDKSSVEIFINDGEEVMTSRIFPD 445 (445)
T ss_pred EEEECCEEEEEECCCEEEEEEeccCC
Confidence 99999999999999999999999994
|
|
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-84 Score=698.85 Aligned_cols=417 Identities=43% Similarity=0.767 Sum_probs=318.0
Q ss_pred cccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCC
Q 008686 53 HFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGG 128 (557)
Q Consensus 53 H~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg 128 (557)
||+|+.||||||||++|++|+||||||++ .||+++||||+|+|||||+++|+||.|+.++|++|||||||++. +|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~~-~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVID-PG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEEC-CC
Confidence 99999999999999999999999999999 68899999999999999999999999999999999999999986 78
Q ss_pred eEEEEEeeecCC------CcceE-EEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEee
Q 008686 129 NPAVLYTGIDAG------NKQVQ-NLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGS 201 (557)
Q Consensus 129 ~~~l~YTg~~~~------~~~~q-~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga 201 (557)
++++||||+... ..+.| +.|.++| +++|+|++.+||+.+++++...+||||+|+|. ++++|||++|+
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d-----~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g~ 153 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDL-----GGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIGA 153 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCC-----CCeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEEE
Confidence 899999998421 12333 4454444 38999987799998766666789999998776 44799999998
Q ss_pred ec-CCccEEEEEEeCCCCCCEEccccccc--CCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEE
Q 008686 202 KI-NDTGLAILYRSKDFVNWTKAEQSLYS--TNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYT 278 (557)
Q Consensus 202 ~~-~~~G~i~ly~S~Dl~~W~~~~~~~~~--~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~ 278 (557)
+. +..|+|+||+|+||++|++.+.++.. ...++|||||+||+|+.+| .+.||||++|.++...+.|+
T Consensus 154 ~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y~ 223 (437)
T smart00640 154 SDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYYF 223 (437)
T ss_pred EecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEEE
Confidence 76 56799999999999999999865543 2345899999999998543 23599999999876778999
Q ss_pred EEEEecCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCC-CCCCCCCccccccccEEEEEe
Q 008686 279 IGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTR-SDNLKKGWAGLQATPRNLWLD 356 (557)
Q Consensus 279 vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~-~~~~~~gW~g~ltlPReL~l~ 356 (557)
+|.+++. .+|+|+.... ...+++||+|+ |||||+|.+++++|+||||||++|+.. ...+..+|+|+|||||||+|+
T Consensus 224 ~G~~~g~-~~f~~~~~~~-~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l~ 301 (437)
T smart00640 224 VGYFDGS-DQFTPDDPED-VGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTLD 301 (437)
T ss_pred EEEEcCc-eeEeECCccc-cCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEEE
Confidence 9999863 4798875421 12345899998 999999998755699999999999742 222338999999999999995
Q ss_pred -ccCCeEEecchHHHHhhhcCccccCCeEecCCceEEec--ccccceeEEEEEEEecccccccccccccCCCCcccceEE
Q 008686 357 -KSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGIT--GITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCPFGL 433 (557)
Q Consensus 357 -~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~l~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fgl 433 (557)
++| +|+|+|++||++||... ......+..+....+. ...+.+++|+++++.... ...+|||
T Consensus 302 ~~~g-~L~~~Pv~el~~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~--------------~~~~~~l 365 (437)
T smart00640 302 KTGG-KLLQWPVEELESLRNVK-ELSNLTLKPGSVNELLGLTASGDAYEIELSFEVDSG--------------GAGPFGL 365 (437)
T ss_pred ecCC-EEEEeecHHHHhhhCcc-cccceeecCCceeeeecccCCccEEEEEEEEEeCCC--------------cceeEEE
Confidence 566 79999999999999542 2222233222211221 123456677777654310 1125999
Q ss_pred EEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCC-CCCCcceeEEeecCCCCeEEEEEEEeCCeEEEEecCC
Q 008686 434 LVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDD-NDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGG 511 (557)
Q Consensus 434 ~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~-~~~~~~~~~~~~~~~~~~~~LrIfvD~S~vEVFvNdG 511 (557)
.+++++++++.+.|.|+... +. +.+||++++.... ........+.++. .+++++||||||+||||||+|||
T Consensus 366 ~~~~~~~~~~~~~i~~~~~~---~~---l~vdR~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lri~vD~ssvEvf~ndG 437 (437)
T smart00640 366 LVLASEDLSEQTAVYFDVSK---GT---LCLDRRSSGTSNDEVFKGVRGATVPVD-PGETLSLRILVDHSSVEIFANGG 437 (437)
T ss_pred EEEeCCCCCceEEEEEEcCC---eE---EEEecCCCCCCcccccccceeeeeecC-CCCeEEEEEEEeceEEEEEeCCC
Confidence 99998888899999998643 32 4569977642110 0111111112222 34789999999999999999987
|
|
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-73 Score=588.50 Aligned_cols=295 Identities=39% Similarity=0.774 Sum_probs=244.2
Q ss_pred cccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCC
Q 008686 53 HFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGG 128 (557)
Q Consensus 53 H~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg 128 (557)
||+|+.||||||||++|++|+||||||++ .||+++||||+|+|||||+++|+||.|+..+|++|||||||++. ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 99999999999999999999999999999 68999999999999999999999999999999999999999986 67
Q ss_pred eEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCC-CCceEec-CCCCCCCCccCCeEEEecCCCeEEEEEeeecCCc
Q 008686 129 NPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPP-ENPLMVP-ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDT 206 (557)
Q Consensus 129 ~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~-~~Pvi~~-p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~ 206 (557)
++++||||+.+...+.|++|+|.|.+ .+|+|++ .+|||.. |++ ...+||||+|+|. ++++|+|++|++....
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~-~~~~~~m~~g~~~~~~ 153 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWR-EDGRWYMLLGAGRDGR 153 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEE-CTTEEEEEEEEEETTE
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEe-cCCEEEEEEeccccCc
Confidence 99999999987668999999996653 8999987 4999975 444 7899999998788 4699999999998888
Q ss_pred cEEEEEEeCCCCCCEEcccccccCC-CCCceeecceEEecCCCCCCeeecccCCceeEEEEEee----cCCceeEEEEEE
Q 008686 207 GLAILYRSKDFVNWTKAEQSLYSTN-QSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSL----SNYQQDYYTIGT 281 (557)
Q Consensus 207 G~i~ly~S~Dl~~W~~~~~~~~~~~-~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~----~~~~~~~Y~vG~ 281 (557)
|+|++|+|+||++|++.+.+..... .+.|||||+||+|+..|. .....+|||++|. .....+.|++|+
T Consensus 154 g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-------~~~~~~~vl~~s~~g~~~~~~~~~Y~vG~ 226 (308)
T PF00251_consen 154 GCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-------GTGKWVWVLIFSPQGIEDNGHGTYYMVGD 226 (308)
T ss_dssp EEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-------SSEEEEEEEEEEEESTTTTTTEEEEEEEE
T ss_pred ceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-------ccceEEEEEEecccccccccccceEEeEE
Confidence 9999999999999999986555433 478999999999995421 0112367899998 345678999999
Q ss_pred EecCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCC-CCCCCCCccccccccEEEEEeccC
Q 008686 282 YNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTR-SDNLKKGWAGLQATPRNLWLDKSG 359 (557)
Q Consensus 282 ~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~-~~~~~~gW~g~ltlPReL~l~~~g 359 (557)
+|..+.+|+++.. .+++||+|+ |||+|+|.+++++|||+||||++++.. ....+.+|+|+|||||||+|++++
T Consensus 227 ~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~~~ 301 (308)
T PF00251_consen 227 FDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKDEG 301 (308)
T ss_dssp EETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEETTS
T ss_pred ecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEECC
Confidence 9877789987621 368999999 999999999754599999999999864 223368999999999999997544
Q ss_pred CeEEecc
Q 008686 360 RQLMQWP 366 (557)
Q Consensus 360 ~~L~q~P 366 (557)
++|+|+|
T Consensus 302 ~~L~q~P 308 (308)
T PF00251_consen 302 GRLYQKP 308 (308)
T ss_dssp SSEEEEE
T ss_pred CeEEEcC
Confidence 5899998
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-65 Score=523.53 Aligned_cols=282 Identities=37% Similarity=0.733 Sum_probs=240.9
Q ss_pred CCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLY 134 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~Y 134 (557)
||||||||++|++|+||||||++ .|++++||||+|+|||||+++++||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 79999999999999999999999 67899999999999999999999999988899999999999986339999999
Q ss_pred eeecC---CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCccEEE
Q 008686 135 TGIDA---GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDTGLAI 210 (557)
Q Consensus 135 Tg~~~---~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~G~i~ 210 (557)
||+.+ .+.+.|++|+|+|. +++|+|...+|++.++ .....+||||+|++. +|+|+|++|++. +..|+|.
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~~-~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i~ 153 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPPP-DGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRIL 153 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcCC-CCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEEE
Confidence 99874 46789999999853 3899999888888633 335679999997655 489999999986 4578999
Q ss_pred EEEeCCCCCCEEccccc-ccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCC------ceeEEEEEEEe
Q 008686 211 LYRSKDFVNWTKAEQSL-YSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNY------QQDYYTIGTYN 283 (557)
Q Consensus 211 ly~S~Dl~~W~~~~~~~-~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~------~~~~Y~vG~~d 283 (557)
+|+|+||++|++.+.+. .....+.|||||+||+|+.. .||||++|.+.. ..+.|++|+++
T Consensus 154 ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~-------------~k~vL~~s~~~~~~~~~~~~~~y~~G~~~ 220 (298)
T cd08996 154 LYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVE-------------GKWVLIFSPQGLEPEGNGSGTGYLVGDFD 220 (298)
T ss_pred EEECCCCCCCEEcceecccCCCccceEeCCcEEEECCC-------------CeEEEEECCCCCCCCCCccceEEEEEEEE
Confidence 99999999999987542 22345679999999999842 299999998643 45799999999
Q ss_pred cCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCCCCCCCCCccccccccEEEEEeccCCeE
Q 008686 284 ITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQL 362 (557)
Q Consensus 284 ~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~~g~~L 362 (557)
+. .|+++. ...++||+|+ |||||+|.++ +||+|+||||++++...+..+.+|+|+|||||+|+|++++ +|
T Consensus 221 ~~--~~~~~~-----~~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~~~-~l 291 (298)
T cd08996 221 GT--TFTFDH-----TEFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKDGG-RL 291 (298)
T ss_pred CC--CCeEec-----CCceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEccCC-EE
Confidence 75 565541 1267899998 9999999986 7999999999999987777789999999999999999765 89
Q ss_pred EecchHH
Q 008686 363 MQWPISE 369 (557)
Q Consensus 363 ~q~Pv~e 369 (557)
.|+|++|
T Consensus 292 ~~~P~~e 298 (298)
T cd08996 292 YQRPVRE 298 (298)
T ss_pred EEEeCCC
Confidence 9999976
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-54 Score=436.49 Aligned_cols=262 Identities=28% Similarity=0.485 Sum_probs=217.9
Q ss_pred cCCcceEEECCEEEEEEEEe----cC--CCeEEEEEEeCCCCcceecCCCCCCC-CCcCCCceEeeeEEEccCCeEEEEE
Q 008686 62 NDPNGPMIYKGIYHFFYQYK----LW--DTVVWGHSTSTDMVNWTPHDAAIYPS-QPFDANSCWSGSVTILPGGNPAVLY 134 (557)
Q Consensus 62 nDPnG~~~~~G~YHlfyq~~----~~--g~~~Wgha~S~DlvhW~~~~~aL~P~-~~~d~~gv~SGsav~~~dg~~~l~Y 134 (557)
.|| .++|++|+||||||++ .| ++++||||+|+||+||++++++|.|. ..++..|||||+|++. +|+++|||
T Consensus 1 ~d~-~~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~~-~g~~~l~Y 78 (280)
T cd08995 1 GDP-MPFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIKG-EGTYHAFY 78 (280)
T ss_pred CCc-cceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEee-CCEEEEEE
Confidence 488 6899999999999999 45 78999999999999999999999884 5678899999999985 89999999
Q ss_pred eeecCC--CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-----CCcc
Q 008686 135 TGIDAG--NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-----NDTG 207 (557)
Q Consensus 135 Tg~~~~--~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-----~~~G 207 (557)
||+... ..+.|++|+|+|+ ++|+|.+.+||+.+++++...+||||+|++.+.+|+|||++|++. +..|
T Consensus 79 Tg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g 153 (280)
T cd08995 79 TGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRG 153 (280)
T ss_pred EEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCe
Confidence 998652 4678999999874 799998778888755555567899999766544799999999875 3578
Q ss_pred EEEEEEeCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC-CceeEEEEEEEecCC
Q 008686 208 LAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN-YQQDYYTIGTYNITT 286 (557)
Q Consensus 208 ~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~-~~~~~Y~vG~~d~~~ 286 (557)
+|.+|+|+||++|++.+ ++.....+.|||||++|+++ | +|||++|.+. .....|++|+.. .
T Consensus 154 ~i~~~~S~Dl~~W~~~~-~~~~~~~~~~~E~P~l~~~~--g-------------~~~L~~s~~~~~~~~~Y~~~~~~--~ 215 (280)
T cd08995 154 CIALFTSKDLKNWEYEE-PFYAPGLYFMPECPDLFKMG--D-------------WWYLVYSEFSENRKTHYRVSKSP--F 215 (280)
T ss_pred EEEEEEeCCcCcceecC-ceecCCCcceeecceEEEEC--C-------------EEEEEEEeccCCCcEEEEEeCCC--C
Confidence 99999999999999986 45544456799999999998 5 8999999753 345789999622 3
Q ss_pred CeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCCCCCCCCCccccccccEEEEEeccC
Q 008686 287 DTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSG 359 (557)
Q Consensus 287 ~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~~g 359 (557)
+.|.... ...|| |+ |||||+|.++ |||||||||++++...++.+.+|+|+|| ||+|.+.+||
T Consensus 216 g~~~~~~-------~~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~~g 278 (280)
T cd08995 216 GPWRAPD-------DDTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNEDG 278 (280)
T ss_pred CCeEcCC-------cCccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECCCC
Confidence 4564322 23589 99 9999999985 8999999999998877777899999998 6888887777
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=312.51 Aligned_cols=239 Identities=26% Similarity=0.367 Sum_probs=188.9
Q ss_pred cCCcceEEECCEEEEEEEEecCC-----CeEEEEEEeCCCCcceecCCCC--CCCCCcCCCceEeeeEEEccCCeEEEEE
Q 008686 62 NDPNGPMIYKGIYHFFYQYKLWD-----TVVWGHSTSTDMVNWTPHDAAI--YPSQPFDANSCWSGSVTILPGGNPAVLY 134 (557)
Q Consensus 62 nDPnG~~~~~G~YHlfyq~~~~g-----~~~Wgha~S~DlvhW~~~~~aL--~P~~~~d~~gv~SGsav~~~dg~~~l~Y 134 (557)
-||+.+. |+||||||++..+ ..+|+||+|+||+||++.+.+| .|...+|..+||+|+++...+|+++|||
T Consensus 7 ~~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Y 83 (276)
T cd08979 7 FNPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFY 83 (276)
T ss_pred cCCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEE
Confidence 3665544 8999999999322 4678999999999999999887 5667789999999999986449999999
Q ss_pred eeecC--CCcceEEEEEEcCCCCCccceeecCCCCceE-----ecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCc
Q 008686 135 TGIDA--GNKQVQNLAVPKNLSDPYLKEWIKPPENPLM-----VPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDT 206 (557)
Q Consensus 135 Tg~~~--~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi-----~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~ 206 (557)
|+... ...+.+++|+|+|+ .+|+|.+.+|++ ..+......++|||+|++.+.+|+|+|+++++. +..
T Consensus 84 t~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~ 158 (276)
T cd08979 84 TGYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADER 158 (276)
T ss_pred ecccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCC
Confidence 99873 46788999999984 789998766653 222333457899999766533389999999875 356
Q ss_pred cEEEEEEeCCCCCCEEccccc--ccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC-CceeEEEEEEEe
Q 008686 207 GLAILYRSKDFVNWTKAEQSL--YSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN-YQQDYYTIGTYN 283 (557)
Q Consensus 207 G~i~ly~S~Dl~~W~~~~~~~--~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~-~~~~~Y~vG~~d 283 (557)
++|.+|+|+|+.+|++.+.+. .......++|||++|+++ | +|+|+++... .....|.+|.++
T Consensus 159 ~~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------------~~~l~~~~~~~~~~~~y~vg~~~ 223 (276)
T cd08979 159 GAIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------------RWYLLYSGRNEDAKTGYRVGTAL 223 (276)
T ss_pred cEEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC--C-------------EEEEEEEecCccCCccEEEEecc
Confidence 899999999999999987542 222346799999999998 5 8999998764 456789999876
Q ss_pred cCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCC
Q 008686 284 ITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINES 332 (557)
Q Consensus 284 ~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~ 332 (557)
.. .+.|.. ...+|.|. |||+|++.+.+++|++++|||+++
T Consensus 224 ~~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 224 FG--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred cC--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 53 455432 35799999 999999987546899999999987
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=296.47 Aligned_cols=268 Identities=25% Similarity=0.377 Sum_probs=204.3
Q ss_pred cCCcceEEECCEEEEEEEEecC-CCeEEEEEEeCCCCcceecCCCCC----CCCCcCCCceEeeeEEEccCCeEEEEEee
Q 008686 62 NDPNGPMIYKGIYHFFYQYKLW-DTVVWGHSTSTDMVNWTPHDAAIY----PSQPFDANSCWSGSVTILPGGNPAVLYTG 136 (557)
Q Consensus 62 nDPnG~~~~~G~YHlfyq~~~~-g~~~Wgha~S~DlvhW~~~~~aL~----P~~~~d~~gv~SGsav~~~dg~~~l~YTg 136 (557)
|||+ +++++|+||||||++.+ +.++|+|++|+||+||++++.+|. |...++..++|+|+++...+|+++||||+
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~yt~ 79 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKNGNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLYYTD 79 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCCCCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEEEEe
Confidence 7999 89999999999999833 578999999999999999998874 66777888999999998744999999999
Q ss_pred ecC-CCcceEEEEEEcCCCCCccceeecCCCCceEec-CCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCccEEEEEE
Q 008686 137 IDA-GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP-ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDTGLAILYR 213 (557)
Q Consensus 137 ~~~-~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~-p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~G~i~ly~ 213 (557)
... ...+.+++|+|+|.. ..|++...+|++.. +.......+|||+|+ .+++|+|||++++.. ...+.|.+++
T Consensus 80 ~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~-~d~dG~~y~~~~~~~~~~~~~i~~~~ 154 (286)
T cd08772 80 VSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVF-EDDDGKWYLVFGSGDHHNFGGIFLYE 154 (286)
T ss_pred ecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEE-EcCCCCEEEEEccccCCCCCeEEEEE
Confidence 863 356789999998863 35676555566542 223345689999965 435699999999865 3457899999
Q ss_pred eCCCCCCEEcccc--cccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC------CceeEEEEEEEecC
Q 008686 214 SKDFVNWTKAEQS--LYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN------YQQDYYTIGTYNIT 285 (557)
Q Consensus 214 S~Dl~~W~~~~~~--~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~------~~~~~Y~vG~~d~~ 285 (557)
|+|+.+|...+.+ ........++|||++|+++ | +|+|++|... .....|++++.+
T Consensus 155 s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g-------------~~yL~~s~~~~~~~~~~y~~~~~~~~~~-- 217 (286)
T cd08772 155 SDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--G-------------KYYLFYSINGTGRVDSTYSIGYARSESD-- 217 (286)
T ss_pred cCCCCCcccccceeeEeeccCCCceeccEEEEEC--C-------------EEEEEEEcCCCcCCCCCcceEEEEccCC--
Confidence 9999999876643 1223356799999999998 6 8999988754 345677887643
Q ss_pred CCeEeecCCcc-CCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCCCCCCCCCccccccccEEEE
Q 008686 286 TDTYIAEEGSF-DDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLW 354 (557)
Q Consensus 286 ~~~F~~~~~~~-~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~ 354 (557)
.+.|.+..... ........|.+. +||+++|.++ +||++|++|+..+..... ...+|+++|+|||+|.
T Consensus 218 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~ 286 (286)
T cd08772 218 TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLLW 286 (286)
T ss_pred CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCccccccccccC
Confidence 35676543110 000123467777 9999999987 799999999999875433 5679999999999873
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-24 Score=224.72 Aligned_cols=265 Identities=19% Similarity=0.244 Sum_probs=169.0
Q ss_pred CCcceEE-ECCEEE-EEEEEe--------cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEE
Q 008686 63 DPNGPMI-YKGIYH-FFYQYK--------LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 63 DPnG~~~-~~G~YH-lfyq~~--------~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l 132 (557)
|..|-+. ++| || +|+... .|+.+||+|++|+||+||++.+ +|.|+..+|.+|||||||++..||+++|
T Consensus 9 d~~g~~~~~~G-~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~-~l~p~~~~d~~g~wSGsa~~~~dg~~~l 86 (349)
T cd08997 9 DRDGEVASYNG-YEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGG-KVFPDGLSPGSREWSGSATLDDDGTVQL 86 (349)
T ss_pred CCCCCEEEECC-EEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCC-ccCCCCcccCCCeEcceEEEeCCCeEEE
Confidence 5555333 577 56 888877 3789999999999999999955 4678888999999999999865799999
Q ss_pred EEeeecC----CCcceEEEEEEcCCCC-CccceeecCCCCceEecC--------------CCCCCCCccCCeEEEecCCC
Q 008686 133 LYTGIDA----GNKQVQNLAVPKNLSD-PYLKEWIKPPENPLMVPA--------------DQIDPGSFRDPTTAWIGPDK 193 (557)
Q Consensus 133 ~YTg~~~----~~~~~q~lA~s~d~~d-~~l~~w~k~~~~Pvi~~p--------------~~~~~~~fRDP~V~~~~~~g 193 (557)
||||+.+ .+...|++|.+++... .-++.|++. .+++.++ +.....+||||+|+..+++|
T Consensus 87 fYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~--~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G 164 (349)
T cd08997 87 FYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDH--HELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETG 164 (349)
T ss_pred EEeccccCCCCCCCceEEEEEEECCCcceEecccCcc--ceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCC
Confidence 9999864 2457788887765420 001233332 2344321 12236789999965443379
Q ss_pred eEEEEEeeecC-C---------------------------ccEEEEE--EeCCCCCCEEcccccccCC-CCCceeecceE
Q 008686 194 IWRVIIGSKIN-D---------------------------TGLAILY--RSKDFVNWTKAEQSLYSTN-QSGMWECPDFF 242 (557)
Q Consensus 194 ~~~m~~ga~~~-~---------------------------~G~i~ly--~S~Dl~~W~~~~~~~~~~~-~~~~~ECPdlf 242 (557)
+|||++++... . .|+|.++ +|+|+.+|++.+ ||.... -...||||++|
T Consensus 165 ~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~-PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 165 KTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLP-PLLEANGVNDELERPHVV 243 (349)
T ss_pred cEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcC-ccccCCCcCCceEcceEE
Confidence 99999998762 2 3666666 567999999987 454332 24579999999
Q ss_pred EecCCCCCCeeecccCCceeEEEEEeecCC---------ceeEEEEEEEecCCCeEeecCCccCCCCccccc--cCCCcc
Q 008686 243 PVSTKSPKGVDTSVIGPNIKHVLKVSLSNY---------QQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYD--YGKFYG 311 (557)
Q Consensus 243 ~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~---------~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD--~G~fYA 311 (557)
+++ | ||+|++|.... ....+++++ ...+.|.|-+. +...|- .-.-|.
T Consensus 244 ~~~--g-------------k~yL~~s~~~~~~~~~~~~~~~~~g~vsd--sl~GP~~~~n~-----sglvl~~p~~~~~~ 301 (349)
T cd08997 244 FHN--G-------------KYYLFTISHRSTFAPGLSGPDGLYGFVSD--SLRGPYKPLNG-----SGLVLGNPTDAPFQ 301 (349)
T ss_pred EEC--C-------------EEEEEEeCCcCccccccCCCCcEEEEEeC--CCCCCCccCCC-----CcceeCCCCCCccc
Confidence 998 6 89998885322 123444553 22345655321 011110 002333
Q ss_pred ceeeeeCCCCcEEEEEEecCCCCCCCCCCCCccccccccEEEEEecc
Q 008686 312 SKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKS 358 (557)
Q Consensus 312 ~qt~~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~~ 358 (557)
+++..-.+ .-++...|.+..... ......|.++-.-.|.|+.|
T Consensus 302 ~ys~~~~p--~~lv~Sfid~~~~~~--~~~~~~gT~aPt~~l~~~gd 344 (349)
T cd08997 302 TYSWYVMP--NGLVTSFIDNVGFAD--GGSRFGGTLAPTLKLNLKGD 344 (349)
T ss_pred cceEEEEC--CCEEEEEecccCCcc--cccccCCeeCCeEEEEEcCC
Confidence 44443333 346667888776432 13456777865556666543
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-20 Score=190.87 Aligned_cols=174 Identities=20% Similarity=0.366 Sum_probs=134.8
Q ss_pred cCCcceEEECCEEEEEEEEec--------CCCeEEEEEEeCCC-Cccee-cCCCCCCCC-CcCCCceEeeeEEEccCCeE
Q 008686 62 NDPNGPMIYKGIYHFFYQYKL--------WDTVVWGHSTSTDM-VNWTP-HDAAIYPSQ-PFDANSCWSGSVTILPGGNP 130 (557)
Q Consensus 62 nDPnG~~~~~G~YHlfyq~~~--------~g~~~Wgha~S~Dl-vhW~~-~~~aL~P~~-~~d~~gv~SGsav~~~dg~~ 130 (557)
-+|. +++++|+|||||.... .+...+|+|+|+|+ -+|++ ..++|.|.. .||..+++.++++..++|++
T Consensus 81 ~~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~ 159 (291)
T cd08994 81 HNPT-IKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSY 159 (291)
T ss_pred cCCe-EEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCE
Confidence 4784 6788999999999862 23578999999994 69998 456777754 37888899999987558999
Q ss_pred EEEEeeecCC---CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC---
Q 008686 131 AVLYTGIDAG---NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN--- 204 (557)
Q Consensus 131 ~l~YTg~~~~---~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~--- 204 (557)
+|+|+|.... ..+.+++|+|+|.. .+|+|....|++ . + ....++|||+| |+ .+|+|||+++++..
T Consensus 160 ~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~-~-~-~~~~~~~dP~V-~~-~~g~yym~~~~~~~~~~ 230 (291)
T cd08994 160 LLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI-E-P-GDNGNTEDPFV-WY-DKGQFHMIVKDMLGYVT 230 (291)
T ss_pred EEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc-c-C-CCCCceeCceE-EE-eCCEEEEEEeecccCcC
Confidence 9999998642 35778999998862 479997655665 2 2 23578999995 66 46999999998863
Q ss_pred -CccEEEEEEeCCCCCCEEcccccc----c--C---CCCCceeecceE-Eec
Q 008686 205 -DTGLAILYRSKDFVNWTKAEQSLY----S--T---NQSGMWECPDFF-PVS 245 (557)
Q Consensus 205 -~~G~i~ly~S~Dl~~W~~~~~~~~----~--~---~~~~~~ECPdlf-~l~ 245 (557)
..++|.+|+|+|+++|++.+.+++ . . ...+|||||++| +.+
T Consensus 231 ~~~~~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 231 GEKGGGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred CCCceEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 468999999999999999875532 1 1 136799999999 777
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.9e-19 Score=181.76 Aligned_cols=189 Identities=17% Similarity=0.254 Sum_probs=138.8
Q ss_pred CCCccCCcceEEECCEEEEEEEEec--CCCeEEEEEEeCCCCcceecCCCCCCC-CCcCCCceEeeeEEEccCCeEEEEE
Q 008686 58 SSWMNDPNGPMIYKGIYHFFYQYKL--WDTVVWGHSTSTDMVNWTPHDAAIYPS-QPFDANSCWSGSVTILPGGNPAVLY 134 (557)
Q Consensus 58 ~gw~nDPnG~~~~~G~YHlfyq~~~--~g~~~Wgha~S~DlvhW~~~~~aL~P~-~~~d~~gv~SGsav~~~dg~~~l~Y 134 (557)
.||++||+ +++++|+||||++... +....|.+++|+||+||+.++.+|.+. ..++..++|+++++.. +|+++|||
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~~~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~~-~g~yy~yy 82 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAGGEQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIER-NGKYYFYF 82 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCCCCeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEEE-CCEEEEEE
Confidence 46899996 5788999999998762 235789999999999999999988764 4577789999999875 89999999
Q ss_pred eeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEE-E
Q 008686 135 TGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILY-R 213 (557)
Q Consensus 135 Tg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly-~ 213 (557)
|+. +.+++|+|++.. ..|++...+|++.+.. .....+||.| |.+++|+|||++++. +.+.++ .
T Consensus 83 s~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~v-f~d~dG~~yl~~~~~----~~~~i~~l 146 (275)
T cd09004 83 SAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDV-FIDDDGQAYLYWGGW----GHCNVAKL 146 (275)
T ss_pred EcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCe-EECCCCCEEEEEcCc----CCEEEEEE
Confidence 986 457899998763 4688744578875432 2357899996 454689999999864 223333 4
Q ss_pred eCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEE
Q 008686 214 SKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIG 280 (557)
Q Consensus 214 S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG 280 (557)
|+|+.+|......+ ......+.|||.+|+.+ | +++|++|........|.++
T Consensus 147 ~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~--G-------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 147 NEDMISFDGERDGS-EITPKNYFEGPFMFKRN--G-------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred CCCcccccCcceee-eccCCCceecceEEEEC--C-------------EEEEEEECCCCCCCCceEE
Confidence 68888886543221 12234589999999987 6 8888888754322334444
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.5e-19 Score=180.60 Aligned_cols=158 Identities=15% Similarity=0.221 Sum_probs=120.3
Q ss_pred CCcceEEECCEEEEEEEEe-cCCCeEEEEEEeCCCCcceecC-CCCCC--CCCcCCCceEeeeEEEccCCeEEEEEeeec
Q 008686 63 DPNGPMIYKGIYHFFYQYK-LWDTVVWGHSTSTDMVNWTPHD-AAIYP--SQPFDANSCWSGSVTILPGGNPAVLYTGID 138 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~-~~g~~~Wgha~S~DlvhW~~~~-~aL~P--~~~~d~~gv~SGsav~~~dg~~~l~YTg~~ 138 (557)
|| |+++++|+||||||.+ ..+.++|+||+|+|++||++.+ +.|.| +..++..+|++++++.. +|+++|+||+..
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~~-~g~y~m~Yta~~ 79 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGNDGVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVKI-DDTYYITYAARP 79 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCCCceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEEE-CCEEEEEEEccC
Confidence 78 7999999999999987 3468999999999999999875 34666 56788899999999875 999999999986
Q ss_pred C-CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEec-CCCeEEEEEeeec---CCccEEEEEE
Q 008686 139 A-GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIG-PDKIWRVIIGSKI---NDTGLAILYR 213 (557)
Q Consensus 139 ~-~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~-~~g~~~m~~ga~~---~~~G~i~ly~ 213 (557)
. ...+++++|.|+|. .+|+|.. .+ +. + ..||+.+ |.+ .+|+|+|++.... +..+.|.+++
T Consensus 80 ~~~~~~~i~lA~S~D~-----~~W~~~~-~~-~~-~------~~~d~~~-~p~~~~g~y~m~~r~~~~~~~~~~~I~lA~ 144 (268)
T cd08993 80 NAPNGTRIGLATTKDF-----ITFERLG-TS-LV-P------NNRDGIL-FPEKINGKYVMLHRPFEYGGTSPPDMWLSF 144 (268)
T ss_pred CCCCCcEEEEEEeCCc-----ceEEEec-cc-CC-C------CCCCEEE-eeEEECCEEEEEEccccCCCCCCCcEEEEE
Confidence 3 35678999999884 7999963 21 11 1 2378874 532 4899999996542 2467899999
Q ss_pred eCCCCCCEEcccccccCCCCCceeec
Q 008686 214 SKDFVNWTKAEQSLYSTNQSGMWECP 239 (557)
Q Consensus 214 S~Dl~~W~~~~~~~~~~~~~~~~ECP 239 (557)
|+||.+|+..+ ++... ....||+-
T Consensus 145 S~Dl~~W~~~~-~~~~~-~~~~wd~~ 168 (268)
T cd08993 145 SPDLVHWGNHR-FVLSP-RPNHWEQL 168 (268)
T ss_pred CCCcCccCCCe-EEecC-CCCceeec
Confidence 99999999765 34332 22346543
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-17 Score=170.16 Aligned_cols=196 Identities=16% Similarity=0.162 Sum_probs=149.2
Q ss_pred ccccCCCCCccCCcceEEE-CCEEEEEEEEec-------C-CCeEEEEEEeCCCC-cceecCCCCCCC--CCcCCCceEe
Q 008686 52 YHFQPPSSWMNDPNGPMIY-KGIYHFFYQYKL-------W-DTVVWGHSTSTDMV-NWTPHDAAIYPS--QPFDANSCWS 119 (557)
Q Consensus 52 yH~~p~~gw~nDPnG~~~~-~G~YHlfyq~~~-------~-g~~~Wgha~S~Dlv-hW~~~~~aL~P~--~~~d~~gv~S 119 (557)
.+|..+..++.+|. ++.. +|+||||||... | ....|+||+|+|+. +|+..+++|.|+ ..||..++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46788889999995 6665 589999999862 1 23569999999987 999999999887 4689999999
Q ss_pred eeEEEccCCeEEEEEeeecC-------CCcceEEEEEEcCCCCCccceeecCCCCceEec-CCCCCCCCccCCeEEEecC
Q 008686 120 GSVTILPGGNPAVLYTGIDA-------GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP-ADQIDPGSFRDPTTAWIGP 191 (557)
Q Consensus 120 Gsav~~~dg~~~l~YTg~~~-------~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~-p~~~~~~~fRDP~V~~~~~ 191 (557)
++++.. +|+++||||+... ...+.+++|+|++. +.+|++. .+||+.+ +.+++...+.||+|+ +.+
T Consensus 83 P~vi~~-~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~----~g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~-~~~ 155 (291)
T cd08994 83 PTIKRF-DGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSL----DGPWKRS-DQPILEPRPGGWDNLITSNPAVT-RRP 155 (291)
T ss_pred CeEEEE-CCEEEEEEEcccCCcccccCCCCceEEEEEeCCC----CCCcEEC-CCceecCCCCccccccccCCCeE-EeC
Confidence 999875 8999999999753 23567888988764 2479987 5799964 344566778999964 534
Q ss_pred CCeEEEEEeeecC----CccEEEEEEeCCC-CCCEEccccc-ccCCCCCceeecceEEecCCCCCCeeecccCCceeEEE
Q 008686 192 DKIWRVIIGSKIN----DTGLAILYRSKDF-VNWTKAEQSL-YSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVL 265 (557)
Q Consensus 192 ~g~~~m~~ga~~~----~~G~i~ly~S~Dl-~~W~~~~~~~-~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl 265 (557)
+|+|+|++.+... ...++.++.|+|. ..|+..+.+. .........|=|.+|+-+ | +|+|
T Consensus 156 ~g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V~~~~--g-------------~yym 220 (291)
T cd08994 156 DGSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFVWYDK--G-------------QFHM 220 (291)
T ss_pred CCCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceEEEeC--C-------------EEEE
Confidence 8999999977641 2457889999988 6899876433 212234568899999976 5 7777
Q ss_pred EEeec
Q 008686 266 KVSLS 270 (557)
Q Consensus 266 ~~s~~ 270 (557)
+++..
T Consensus 221 ~~~~~ 225 (291)
T cd08994 221 IVKDM 225 (291)
T ss_pred EEeec
Confidence 77653
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.79 E-value=6e-18 Score=173.94 Aligned_cols=158 Identities=20% Similarity=0.286 Sum_probs=120.9
Q ss_pred ccCCcceEEECCEEEEEEEEec------CCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEE
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKL------WDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLY 134 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~------~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~Y 134 (557)
+.+|. +++++|+||||||++. ++.++|+||+|+||++|++.++++.+ ..++++++++...+|+++|||
T Consensus 79 ~WAP~-v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~~~-----~~~~iD~~vf~~~dg~~yl~y 152 (294)
T cd08984 79 FWAPE-VVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVDLD-----SDRVIDACVFKLPDGRWRMWY 152 (294)
T ss_pred eeCce-EEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCccccC-----CCCcEEeEEEEeCCCEEEEEE
Confidence 46785 7889999999999872 34789999999999999998875322 357899999986569999999
Q ss_pred eeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEe
Q 008686 135 TGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRS 214 (557)
Q Consensus 135 Tg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S 214 (557)
|+.. ....+++|.|+|. .+|++. .+++.. ...++|+| |+ .+|+|||+++. ..| +.+|+|
T Consensus 153 ~~~~--~~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v-~k-~~g~yym~~~~---~~g-~~~~~S 211 (294)
T cd08984 153 KDER--RGSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV-FR-WKGYYWMIIDE---WKG-LGVYRS 211 (294)
T ss_pred ECCC--CCeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe-eE-ECCEEEEEEcC---Cce-EEEEEC
Confidence 9864 3455688988874 789984 456542 12389996 45 47899999854 234 679999
Q ss_pred CCCCCCEEcccccccCC----CCCceeecceEEec
Q 008686 215 KDFVNWTKAEQSLYSTN----QSGMWECPDFFPVS 245 (557)
Q Consensus 215 ~Dl~~W~~~~~~~~~~~----~~~~~ECPdlf~l~ 245 (557)
+|+.+|++.+.++.... ...+.+||++|+.+
T Consensus 212 ~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 212 KDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred CChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 99999999987665321 24478999999876
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-17 Score=168.90 Aligned_cols=186 Identities=20% Similarity=0.216 Sum_probs=133.3
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCC-cCCCceEeeeEEEccCCeEEEEEeee
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQP-FDANSCWSGSVTILPGGNPAVLYTGI 137 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~-~d~~gv~SGsav~~~dg~~~l~YTg~ 137 (557)
+.+-||. +++++|+|+||+.... ..+|.+++|+||+||+.++.+|.+... ++..++|.+.++.. +|+++|+|++.
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~--~~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~~-~g~y~~~y~~~ 81 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGN--GPNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSYV-NGKYVLYYSAR 81 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCC--CCcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEEE-CCEEEEEEEee
Confidence 4567994 7788999999998653 378999999999999999988877665 45567899988875 89999999998
Q ss_pred cCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCcc---EEEEEE
Q 008686 138 DAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTG---LAILYR 213 (557)
Q Consensus 138 ~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G---~i~ly~ 213 (557)
... ..+.+++|+|+|.. ..|++... +++..+. .....+||.|+ .+++|++||++++.....| .+.+.+
T Consensus 82 ~~~~~~~~i~~a~s~~p~----g~~~~~~~-~~~~~~~--~~~~~~Dp~v~-~d~dG~~Yl~~~~~~~~~~~~~~i~~~~ 153 (287)
T cd08999 82 DKGSGGQCIGVATADSPL----GPFTDHGK-PPLCCPE--GEGGAIDPSFF-TDTDGKRYLVWKSDGNSIGKPTPIYLQE 153 (287)
T ss_pred cCCCCCEEEEEEECCCCC----CCCccCCc-ceEecCC--CCCCccCCCeE-ECCCCCEEEEEeccCCCCCCCceEEEEE
Confidence 652 45667888887753 46887643 3343222 23567999964 5468999999987542211 244443
Q ss_pred -eCCCCCCEEcccccccC---CCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 214 -SKDFVNWTKAEQSLYST---NQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 214 -S~Dl~~W~~~~~~~~~~---~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
|+|+.+|......+... ....++|||.+|+.+ | +++|++|...
T Consensus 154 ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~~S~~~ 200 (287)
T cd08999 154 LSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG--G-------------YYYLFYSAGG 200 (287)
T ss_pred eCCCCccccCCcEeeecccccccCCceEeeEEEEEC--C-------------EEEEEEEcCC
Confidence 68888886443222211 134689999999997 6 8999988743
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.8e-16 Score=159.77 Aligned_cols=191 Identities=16% Similarity=0.213 Sum_probs=138.1
Q ss_pred CCcceEEECCEEEEEEEEecCC-------CeEEEEEEeCCCCcceecCCCCCCCC--CcCCCceEeeeEEEccCCeEEEE
Q 008686 63 DPNGPMIYKGIYHFFYQYKLWD-------TVVWGHSTSTDMVNWTPHDAAIYPSQ--PFDANSCWSGSVTILPGGNPAVL 133 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~~~g-------~~~Wgha~S~DlvhW~~~~~aL~P~~--~~d~~gv~SGsav~~~dg~~~l~ 133 (557)
|| .++.++|+||||.....++ ...|..++|+||+||+..+.+|.+.. .|+..++|.++++.. +|++|||
T Consensus 2 DP-~~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~~-~g~yy~y 79 (274)
T cd08990 2 DP-AAHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVEK-NGKYYLY 79 (274)
T ss_pred CC-CcEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEEE-CCEEEEE
Confidence 89 5778899999999887322 24589999999999999999887543 377889999999875 8999999
Q ss_pred EeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEE
Q 008686 134 YTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYR 213 (557)
Q Consensus 134 YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~ 213 (557)
|++......+.+++|+|++.. ..|++....|++...+ ......||.+ +.+++|++||++++. .+....-.
T Consensus 80 y~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~~--~~~~~iDp~v-f~d~dG~~yl~~~~~---~~~~~~~l 149 (274)
T cd08990 80 FPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTPS--GGWYSIDPAV-FIDDDGQAYLYWGGG---LGLRVAKL 149 (274)
T ss_pred EEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccCC--CCCCccCCcE-EECCCCCEEEEECCc---CCEEEEEe
Confidence 998754345678899998753 4688865445554221 2356789995 454689999999864 23333345
Q ss_pred eCCCCCCEEccccccc-----CCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEE
Q 008686 214 SKDFVNWTKAEQSLYS-----TNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIG 280 (557)
Q Consensus 214 S~Dl~~W~~~~~~~~~-----~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG 280 (557)
|+|+.+|+.....+.. .......|+|.+|+.+ | +++|++|........|.+.
T Consensus 150 ~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 150 KPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--G-------------TYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred CccccccCCCcEEEEeccccCCCCCCcccceeEEEEC--C-------------EEEEEEECCCCcEEEEEEc
Confidence 7799999754433321 1234578999999987 6 8999998765445556554
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.8e-15 Score=152.45 Aligned_cols=191 Identities=21% Similarity=0.209 Sum_probs=132.0
Q ss_pred CCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCC----CCCCcCCCceEeeeEEEccCCeEEEEEeeec
Q 008686 63 DPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIY----PSQPFDANSCWSGSVTILPGGNPAVLYTGID 138 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~----P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~ 138 (557)
|| .++.++|+||||+....+....+..++|+||++|+..+.+|. +....+..++|+++++.. +|+++|+|++..
T Consensus 2 DP-~v~~~~~~yyl~~t~~~~~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~~-~g~yyl~y~~~~ 79 (271)
T cd08978 2 DP-YILRYNGKYYLYGSTDDAAGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIYY-EGKYYLYYSVSD 79 (271)
T ss_pred CC-cEEEECCEEEEEEecCCcCCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEEE-CCEEEEEEEccc
Confidence 89 578899999999997633345789999999999999998875 444556678999999875 899999999975
Q ss_pred CC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC--CccEEEEEEeC
Q 008686 139 AG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN--DTGLAILYRSK 215 (557)
Q Consensus 139 ~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~--~~G~i~ly~S~ 215 (557)
.. ..+.+++|+|+|. ..|.+... ...+. ......+||.|+ .+++|++||++++... ..+.|.+++++
T Consensus 80 ~~~~~~~i~~a~s~d~-----~g~~~~~~---~~~~~-~~~~~~iDp~vf-~d~dg~~yl~~~~~~~~~~~~~i~~~~l~ 149 (271)
T cd08978 80 FDYNGSGIGVATSEDP-----TGPFEDKV---IRPPT-SNNGNSIDPTVF-KDDDGKYYLYYGSGDPGAGFGGIYISELT 149 (271)
T ss_pred CCCCcccEEEEECCCC-----CCCccccc---cCcCc-cCCCCccCcceE-EcCCCCEEEEEecccCCCCCCcEEEEEEC
Confidence 32 3567888998875 34544321 11111 123467999965 4466999999987642 34678888887
Q ss_pred CCCCCEEccccc--ccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEE
Q 008686 216 DFVNWTKAEQSL--YSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIG 280 (557)
Q Consensus 216 Dl~~W~~~~~~~--~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG 280 (557)
+...|......+ .......+.|+|.+|+.+ | +|+|++|........|.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 150 DDLTKPTGPPVLSASSGNNNAVTEGPTIFKKN--G-------------YYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred cccccccCCceeeeeeccCCCceEccEEEEEC--C-------------EEEEEEEeCCCCCCCceEE
Confidence 755443211111 112245689999999987 6 8899888754322345454
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-14 Score=149.45 Aligned_cols=180 Identities=15% Similarity=0.134 Sum_probs=126.5
Q ss_pred CCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCC-CcCCCceEeeeEEEccCCeEEEEEeeecCC-
Q 008686 63 DPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQ-PFDANSCWSGSVTILPGGNPAVLYTGIDAG- 140 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~-~~d~~gv~SGsav~~~dg~~~l~YTg~~~~- 140 (557)
||. +++++|+|+||+..... ...+.+++|+||+||+.++.++.+.. .|+..++|.++++.. +|+++|+|++....
T Consensus 2 DP~-v~~~~g~yyl~~t~~~~-~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~~-~g~yyl~ys~~~~~~ 78 (294)
T cd08991 2 DPF-VLRYNGKYYAYGTGGAD-GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYYY-NGKFYMYYSANDRDE 78 (294)
T ss_pred CCe-EEEECCEEEEEEeCCCC-CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEEE-CCEEEEEEEeccCCC
Confidence 894 78899999999876522 24688999999999999998887655 478889999999875 89999999998643
Q ss_pred CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCC---ccEEEEEEeCCC
Q 008686 141 NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND---TGLAILYRSKDF 217 (557)
Q Consensus 141 ~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~---~G~i~ly~S~Dl 217 (557)
..+.+++|+|+|.. ..|++... +.+.. .....||.++ .+++|+|||+++..... .+....-.|.|+
T Consensus 79 ~~~~i~~a~s~~p~----gp~~~~~~-~~~~~-----~~~~iD~~vf-~d~dG~~yl~~~~~~~~~~~~~i~~~~l~~d~ 147 (294)
T cd08991 79 KTEHIGVAVSDSPL----GPFRDIKK-PPIDF-----EPKSIDAHPF-IDDDGKPYLYYSRNNYGNRVSDIYGTELVDDK 147 (294)
T ss_pred CcceEEEEEeCCCC----CCCCcCCC-CcccC-----CCcccCCceE-ECCCCCEEEEEEecCCCCcccceEEEEEccce
Confidence 45778899998753 46776432 22221 1346799965 44679999999865422 234444457888
Q ss_pred CCCEEccc----cccc--------------CCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 218 VNWTKAEQ----SLYS--------------TNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 218 ~~W~~~~~----~~~~--------------~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
.+|..... +... .....+.|+|.+++.+ | +|+|++|...
T Consensus 148 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~ 204 (294)
T cd08991 148 LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN--G-------------RYYLTYSANH 204 (294)
T ss_pred eeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC--C-------------EEEEEEECCC
Confidence 77752111 1111 0123479999999997 5 8899888643
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.3e-14 Score=150.51 Aligned_cols=167 Identities=19% Similarity=0.265 Sum_probs=122.6
Q ss_pred cccccccCCCCC-ccCCcceEEECCEEEEEEEEe-----------------cCCCeEEEEEEeCCCCcceecCCCCCCC-
Q 008686 49 RTGYHFQPPSSW-MNDPNGPMIYKGIYHFFYQYK-----------------LWDTVVWGHSTSTDMVNWTPHDAAIYPS- 109 (557)
Q Consensus 49 rp~yH~~p~~gw-~nDPnG~~~~~G~YHlfyq~~-----------------~~g~~~Wgha~S~DlvhW~~~~~aL~P~- 109 (557)
.|..=+.+..+. ..||..+++.+|+|||||+.. +|....++||+|+||+||++++++|.+.
T Consensus 24 ~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~ 103 (349)
T cd08992 24 YPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGE 103 (349)
T ss_pred CcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCC
Confidence 344444444443 459988999999999999964 1245778999999999999999888654
Q ss_pred -CCcCCCceEeeeEEEccCCeEEEEEeeecCC----CcceEEEEEEcCCCCCccceeecCCCCceEecCC----------
Q 008686 110 -QPFDANSCWSGSVTILPGGNPAVLYTGIDAG----NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPAD---------- 174 (557)
Q Consensus 110 -~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~---------- 174 (557)
..||..++|.++++.. +|++||||++.... ..+.+++|+|+++. ..|++. .+||+.+..
T Consensus 104 ~g~Wd~~~vwaP~Vi~~-dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~ 177 (349)
T cd08992 104 KGAYDDRSVFTPEVLEH-EGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDN 177 (349)
T ss_pred CCCccccceECcEEEEE-CCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCc
Confidence 3589999999999875 99999999986431 23567999998763 359886 579985421
Q ss_pred --------CCCCCCccCCeEEEecCCCeEEEEEeeecC--------CccEEEEEEeCCCC-CCEEc
Q 008686 175 --------QIDPGSFRDPTTAWIGPDKIWRVIIGSKIN--------DTGLAILYRSKDFV-NWTKA 223 (557)
Q Consensus 175 --------~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~--------~~G~i~ly~S~Dl~-~W~~~ 223 (557)
.++...+.||.|+. .+|+|||++.+... ..-+|.++.|++.. -|+..
T Consensus 178 ~~~~~~~g~wD~~~v~~P~v~~--~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~ 241 (349)
T cd08992 178 RFLVKKKGSFDSHKVHDPCLFP--FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKS 241 (349)
T ss_pred eeEeccCCCcccCceECCEEEE--ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeC
Confidence 13455678999654 47899999966431 12368999998875 57654
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.1e-14 Score=144.27 Aligned_cols=179 Identities=20% Similarity=0.196 Sum_probs=124.2
Q ss_pred ccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCC-------cCCCceEeeeEEEccCCeEEEE
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQP-------FDANSCWSGSVTILPGGNPAVL 133 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~-------~d~~gv~SGsav~~~dg~~~l~ 133 (557)
+.|| .+++++|+||||+... ++++++|+||+||+..+.+|.+... ....++|.++++.. +|+++||
T Consensus 1 ~~DP-~v~~~~~~yyl~~t~~-----~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~~-~g~yyl~ 73 (288)
T cd08998 1 VHDP-SIIKEGDTYYLFSTGN-----GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIYL-NGKYYLY 73 (288)
T ss_pred CCCC-eEEEECCEEEEEEcCC-----CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEEE-CCEEEEE
Confidence 4699 5889999999999953 7999999999999999988865432 34568999999875 9999999
Q ss_pred EeeecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEE
Q 008686 134 YTGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILY 212 (557)
Q Consensus 134 YTg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly 212 (557)
|++.... ....+++|+|++.. ...|++. +||+...++......+||.++ .+++|++||++++.. +.+.+.
T Consensus 74 ys~~~~~~~~~~i~va~s~~~~---~gpw~~~--~~v~~~~~~~~~~~~iDp~vf-~d~dG~~Yl~~~~~~---~~i~~~ 144 (288)
T cd08998 74 YSVSTFGSNRSAIGLATSDTLP---DGPWTDH--GIVIESGPGRDDPNAIDPNVF-YDEDGKLWLSFGSFW---GGIFLV 144 (288)
T ss_pred EEEEeCCCCceEEEEEEeCCCC---CCCCEEc--ceeeecCCCCCCcccccCCEE-EcCCCCEEEEeeecc---CCEEEE
Confidence 9987643 45667889988750 1478873 588865433233467899965 446899999998643 123344
Q ss_pred Ee-CC---CCCCEEcccccccCC-CCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 213 RS-KD---FVNWTKAEQSLYSTN-QSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 213 ~S-~D---l~~W~~~~~~~~~~~-~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
+. +| ...|......+.... .....|-|.+|+-+ | +++|++|..
T Consensus 145 ~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~--g-------------~YYl~~S~~ 192 (288)
T cd08998 145 ELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG--G-------------YYYLFVSYG 192 (288)
T ss_pred EeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC--C-------------EEEEEEEcc
Confidence 43 22 123321111122111 24468999999987 5 888888854
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-13 Score=141.51 Aligned_cols=165 Identities=21% Similarity=0.271 Sum_probs=119.4
Q ss_pred ccCCcceEEE--CCEEEEEEEEe---------cCC-CeEEEEEEeCC-CCcceecCCCCCCCCCcCCCceEeeeEEEccC
Q 008686 61 MNDPNGPMIY--KGIYHFFYQYK---------LWD-TVVWGHSTSTD-MVNWTPHDAAIYPSQPFDANSCWSGSVTILPG 127 (557)
Q Consensus 61 ~nDPnG~~~~--~G~YHlfyq~~---------~~g-~~~Wgha~S~D-lvhW~~~~~aL~P~~~~d~~gv~SGsav~~~d 127 (557)
.-|| .+++. +|+|||||... .|. ...+++|+|+| |+||+.++.++.++..+....+|++.++.. +
T Consensus 11 ~~DP-~i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~~-~ 88 (294)
T cd08984 11 AADP-TIIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVWH-G 88 (294)
T ss_pred CCCC-EEEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEEE-C
Confidence 7899 57777 78999999532 111 35899999999 999999987776655666677999999875 8
Q ss_pred CeEEEEEeeecC-----CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 008686 128 GNPAVLYTGIDA-----GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSK 202 (557)
Q Consensus 128 g~~~l~YTg~~~-----~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~ 202 (557)
|+++|||+.... ......++|+|+| +.+|++.+ ++... .....||.|+ ...+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~D-----l~~w~~~~--~~~~~-----~~~~iD~~vf-~~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPN-----LWDWTFVG--RVDLD-----SDRVIDACVF-KLPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCC-----cCcceECC--ccccC-----CCCcEEeEEE-EeCCCEEEEEEECC
Confidence 999999997642 1235678888887 36898753 33211 1345799964 44579999999653
Q ss_pred cCCccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEec
Q 008686 203 INDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 203 ~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~ 245 (557)
.. ...+.+..|+|+.+|+..+. ... ...-|.|.+|+.+
T Consensus 156 ~~-~~~~~~a~s~D~~~w~~~~~-~i~---~~~~EgP~v~k~~ 193 (294)
T cd08984 156 RR-GSTTYAADSEDLYHWTVEGP-VLG---DRPHEGPNVFRWK 193 (294)
T ss_pred CC-CeEEEEEECCCCCEEEeCCc-ccc---CCCCCCCCeeEEC
Confidence 22 23567889999999997653 332 1234999999987
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.9e-12 Score=131.19 Aligned_cols=194 Identities=16% Similarity=0.078 Sum_probs=133.7
Q ss_pred CCcceEEECCEEEEEEEEec---CCCeEEEEEEeCCCCcceecCCCCCCCC----CcCCCceEeeeEEEcc-CCeEEEEE
Q 008686 63 DPNGPMIYKGIYHFFYQYKL---WDTVVWGHSTSTDMVNWTPHDAAIYPSQ----PFDANSCWSGSVTILP-GGNPAVLY 134 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~~---~g~~~Wgha~S~DlvhW~~~~~aL~P~~----~~d~~gv~SGsav~~~-dg~~~l~Y 134 (557)
|| ++++++|+|++|-.... .....|...+|+||+||+.++.+|.+.. .+...++|.++++..+ +|+++|+|
T Consensus 5 ~~-~i~~~~~~yY~ygs~~~~~~~~~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~~ 83 (265)
T cd08985 5 GG-GILKVGGTYYWYGENKGGGDTAFGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMWM 83 (265)
T ss_pred cC-ceEEECCEEEEEEEecCCCCcccccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEEEE
Confidence 66 68899999999988762 1246788899999999999999997764 3456679999998753 58999999
Q ss_pred eeecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEE
Q 008686 135 TGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYR 213 (557)
Q Consensus 135 Tg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~ 213 (557)
++...+ ....+++|+|++.. ..|+... .+. +. ....|||.|+ .+++|++||++++..+ ..+.+++
T Consensus 84 ~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~---~~~~~Dp~vf-~DdDG~~Yl~~~~~~~--~~i~i~~ 149 (265)
T cd08985 84 HIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PL---GYQSRDFGLF-VDDDGTAYLLYSDRDN--SDLYIYR 149 (265)
T ss_pred EeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CC---CCCccCCceE-EcCCCCEEEEEecCCC--CceEEEE
Confidence 987532 34678899987653 3466532 121 21 2457999964 5578999999987532 3355666
Q ss_pred e-CCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC---CceeEEEEEEEecCCCeE
Q 008686 214 S-KDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN---YQQDYYTIGTYNITTDTY 289 (557)
Q Consensus 214 S-~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~---~~~~~Y~vG~~d~~~~~F 289 (557)
- +|+..+... +.. .......|||.+|+.+ | +|+|+.|... .....|++.+ ...++|
T Consensus 150 L~~d~~~~~~~--~~~-~~~~~~~EaP~i~K~~--g-------------~YYL~~S~~t~~~~~~~~y~~s~--s~~GP~ 209 (265)
T cd08985 150 LTDDYLSVTGE--VTT-VFVGAGREAPAIFKRN--G-------------KYYLLTSGLTGWNPNDARYATAT--SILGPW 209 (265)
T ss_pred eCCCcccccce--EEE-ccCCCccccceEEEEC--C-------------EEEEEEccCCCccCCceEEEEec--CCCCCc
Confidence 4 677776432 221 1234578999999998 6 8999988642 2345677665 123456
Q ss_pred ee
Q 008686 290 IA 291 (557)
Q Consensus 290 ~~ 291 (557)
+.
T Consensus 210 ~~ 211 (265)
T cd08985 210 TD 211 (265)
T ss_pred cc
Confidence 43
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=99.49 E-value=6e-13 Score=137.67 Aligned_cols=160 Identities=18% Similarity=0.299 Sum_probs=113.8
Q ss_pred cCCcceEEECCE--EEEEEEEe-cCCC-eEEEEEEeCCCCcceecC-CCCCCCCCcCCCceEeeeEEEccCCeEEEEEee
Q 008686 62 NDPNGPMIYKGI--YHFFYQYK-LWDT-VVWGHSTSTDMVNWTPHD-AAIYPSQPFDANSCWSGSVTILPGGNPAVLYTG 136 (557)
Q Consensus 62 nDPnG~~~~~G~--YHlfyq~~-~~g~-~~Wgha~S~DlvhW~~~~-~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg 136 (557)
-.| |++.++|. |||.|... ..+. .+.|+|.|+|.+||+..+ ++|.|+..++..||.+++++.. +|+++|+||+
T Consensus 33 fNp-gai~~~~~~R~~l~yr~~~~~~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~i-~d~yymtYta 110 (312)
T PF04041_consen 33 FNP-GAIVFDGGLRVYLLYRAYGSDIGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTKI-DDTYYMTYTA 110 (312)
T ss_dssp EEE-EEEEETTE--EEEEEEEEESSSSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEEE-TTEEEEEEEE
T ss_pred EcC-cEEEECCeeEEEEEEEeECCCCceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEEE-CCEEEEEEEE
Confidence 357 67766666 89999887 3333 489999999999999874 7899999999999999999986 8999999999
Q ss_pred ecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCC---CCCCCCccCCeEEEec-CCCeEEEEEeeecCCccEEEEE
Q 008686 137 IDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPAD---QIDPGSFRDPTTAWIG-PDKIWRVIIGSKINDTGLAILY 212 (557)
Q Consensus 137 ~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~---~~~~~~fRDP~V~~~~-~~g~~~m~~ga~~~~~G~i~ly 212 (557)
.+. .....++|+|+|. .+|+|.+ +++.... ......-+|-. +|.+ .+|+|+|+.+ .+.|.+.
T Consensus 111 ~~~-~~~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~-lfp~ki~Gky~m~~r-----~~~i~la 176 (312)
T PF04041_consen 111 YSG-KGPRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGA-LFPEKINGKYAMLHR-----DPSIWLA 176 (312)
T ss_dssp EES-SSEEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCE-EEESEETTEEEEEEE-----SSSBEEE
T ss_pred ecC-CCcccceEEccch-----HhhEEec--cccCcccccccccccccCceE-EEEEEECCEEEEEEC-----CCCEEEE
Confidence 975 4567899999984 8999974 2222111 00011225554 3332 4899999998 4578999
Q ss_pred EeCCCCCCEEcccccccCCCCCceee
Q 008686 213 RSKDFVNWTKAEQSLYSTNQSGMWEC 238 (557)
Q Consensus 213 ~S~Dl~~W~~~~~~~~~~~~~~~~EC 238 (557)
.|+|+++|+....++... ..+.||.
T Consensus 177 ~S~Dl~~W~~~~~~~~~~-~~~~~d~ 201 (312)
T PF04041_consen 177 YSPDLIHWGNHREPLLSP-RPGWWDS 201 (312)
T ss_dssp EESSSSSEEEEBETSB---STTSSCS
T ss_pred ecCCcccccccccccccC-CCCcChh
Confidence 999999998775544432 3446776
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.5e-12 Score=129.29 Aligned_cols=178 Identities=13% Similarity=0.149 Sum_probs=120.2
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCC--c----CCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQP--F----DANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~--~----d~~gv~SGsav~~~dg~~~l 132 (557)
+..-||. ++.++|+|+||.....+ ...+..++|+||+||+.++.+|.+... + ...++|++.++.. +|++||
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~~-~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~g~yy~ 82 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFEY-FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRYH-DGTFYL 82 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCccc-CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEEE-CCEEEE
Confidence 4677995 78899999998643222 246899999999999999988754322 2 3457999999875 999999
Q ss_pred EEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC-----Ccc
Q 008686 133 LYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN-----DTG 207 (557)
Q Consensus 133 ~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~-----~~G 207 (557)
||++........+++|+|++.. ..|++ |++.. ....||.+++ +++|++||+++.... ..+
T Consensus 83 yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~-d~dG~~Y~~~~~~~~~~~~~~~~ 147 (288)
T cd09000 83 ITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFF-DDDGKVYLVGNGWDERRGYNGHG 147 (288)
T ss_pred EEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeE-cCCCCEEEEecccCCccccCCCC
Confidence 9998764334557788887753 34653 33321 1558999654 468999999886432 234
Q ss_pred EEEEEEeCCCCCCEEcccc--cccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 208 LAILYRSKDFVNWTKAEQS--LYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 208 ~i~ly~S~Dl~~W~~~~~~--~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
.|.+.+.+ ...|+..+.+ +.........|+|.+|+.+ | +++|++|..
T Consensus 148 ~i~~~~l~-~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~YYl~ys~~ 196 (288)
T cd09000 148 GIWLQEID-LETGKLLGEPKVIWNGTGGRWPEGPHLYKRD--G-------------WYYLLIAEG 196 (288)
T ss_pred cEEEEEEc-cccCCCCCCcEEEEeCCCCCCcccCeEEEEC--C-------------EEEEEEecC
Confidence 56666543 3344444432 2222233578999999987 6 888888754
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.9e-12 Score=128.87 Aligned_cols=182 Identities=15% Similarity=0.272 Sum_probs=124.4
Q ss_pred CCccCCcceEEECCEEEEEEEEec--C-----------CCeEEEEEEeCCCCcceecCCCCCCC--CCcCCCceEeeeEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKL--W-----------DTVVWGHSTSTDMVNWTPHDAAIYPS--QPFDANSCWSGSVT 123 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~--~-----------g~~~Wgha~S~DlvhW~~~~~aL~P~--~~~d~~gv~SGsav 123 (557)
.+.-||. ++.++|+|+||..... . ....+-..+|+||++|+.++.+|.|. ..|. .++|.+.++
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v~ 84 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSIA 84 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCceE
Confidence 4567995 6789999999998751 1 12368899999999999999888732 3454 478999998
Q ss_pred EccC----CeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecC-CCCCCC-CccCCeEEEecCCCeEEE
Q 008686 124 ILPG----GNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPA-DQIDPG-SFRDPTTAWIGPDKIWRV 197 (557)
Q Consensus 124 ~~~d----g~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p-~~~~~~-~fRDP~V~~~~~~g~~~m 197 (557)
.. + |++||+|+.. ...+++|+|++.. ..|+.....|++... ++.... .-.||.++ .+++|++||
T Consensus 85 ~~-~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f-~DdDG~~Yl 154 (311)
T cd09003 85 VK-KINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVF-VDDDGQGYL 154 (311)
T ss_pred Ee-ccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeE-ECCCCCEEE
Confidence 75 6 9999999853 2447899988763 468875456777532 222112 23799964 447899999
Q ss_pred EEeeecC-----CccEEEEEEe-CCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 198 IIGSKIN-----DTGLAILYRS-KDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 198 ~~ga~~~-----~~G~i~ly~S-~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
++++... ..+.+.+.+- +|+..- .+++.. ......+|.|.+++.+ | +++|.+|..
T Consensus 155 ~~g~~~~~~~~~~~~~i~i~~l~~D~~~~--~g~~~~-i~~~~~~Egp~~~K~~--G-------------~YYL~ys~~ 215 (311)
T cd09003 155 YFGGGVPGGRWANPNTARVIKLGDDMISV--DGSAVT-IDAPYFFEASGLHKIN--G-------------TYYYSYCTN 215 (311)
T ss_pred EECCccCCCccccCCCEEEEEeCCCceec--cCCceE-ccCCCceEeeeEEEEC--C-------------EEEEEEeCC
Confidence 9986431 1234666665 466443 232211 1122579999999987 6 889988864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.8e-11 Score=124.67 Aligned_cols=183 Identities=20% Similarity=0.261 Sum_probs=127.2
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCcC--CCce-EeeeEEEccCCeEEEEEe
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFD--ANSC-WSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d--~~gv-~SGsav~~~dg~~~l~YT 135 (557)
+..-||. ++.++|.|+||+...... ..+..++|+||+||+..+.+|.+....+ ..+. |.+.++.. +|+++|||+
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~-~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~~-~g~yy~y~~ 84 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG-PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHYI-NGKYYMYYS 84 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE-SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEEEE-TTEEEEEEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC-CeEEEEECCCCcccccceeeecccccccccccccccCCeEEEc-CCeEEEEEE
Confidence 5667995 788999999999876322 5688999999999999998776665433 2333 99999874 999999999
Q ss_pred eecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCC--ccEEEEEE
Q 008686 136 GIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND--TGLAILYR 213 (557)
Q Consensus 136 g~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~--~G~i~ly~ 213 (557)
.........+++|+|++.. ..|+... .+... .....||.++ .+++|++||+++..... .+.|.+.+
T Consensus 85 ~~~~~~~~~~~va~a~~~~----Gp~~~~~--~~~~~-----~~~~iD~~vf-~d~dG~~Yl~~~~~~~~~~~~~i~~~~ 152 (286)
T PF04616_consen 85 DSGGDAGSGIGVATADSPD----GPWTDPG--KIPIP-----GGNSIDPSVF-VDDDGKYYLYYGSWDNGDPGGGIYIAE 152 (286)
T ss_dssp EESTSTTEEEEEEEESSTT----S-EEEEE--EEEEE-----SSSSSSEEEE-EETTSEEEEEEEESTTTSSEEEEEEEE
T ss_pred ccCCCCCcceeEEEeCCcc----ccccccc--ceeec-----cccccCceEE-EecCCCcEEeCcccCCCccceeEEeec
Confidence 3332345668899998763 4688642 22211 2356899965 44679999999986532 34566666
Q ss_pred e-CCCCCCEEcc-cccccC---CCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 214 S-KDFVNWTKAE-QSLYST---NQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 214 S-~Dl~~W~~~~-~~~~~~---~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
. +|...+.... ..+... ......|.|.+|+.+ | +++|++|...
T Consensus 153 l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~yYl~~s~~~ 200 (286)
T PF04616_consen 153 LDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG--G-------------KYYLFYSAGG 200 (286)
T ss_dssp EETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET--T-------------EEEEEEEESG
T ss_pred ccCccccccCcccccccccccccCCccccceEEEEcC--C-------------CEEEEEeccC
Confidence 5 5666665443 122222 245689999999997 6 8889888643
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.2e-10 Score=118.71 Aligned_cols=178 Identities=16% Similarity=0.118 Sum_probs=121.5
Q ss_pred CCCccCCcceEEE--CCEEEEEEEEec----C-CCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEcc-CCe
Q 008686 58 SSWMNDPNGPMIY--KGIYHFFYQYKL----W-DTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILP-GGN 129 (557)
Q Consensus 58 ~gw~nDPnG~~~~--~G~YHlfyq~~~----~-g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~-dg~ 129 (557)
.+-+.||. +++. +|+|||++.... + +...+.+++|+||+||+..+.++.... ...++|.+.++.++ +|+
T Consensus 15 ~~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~ 91 (276)
T cd08983 15 TKGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQ 91 (276)
T ss_pred CCCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCe
Confidence 35578995 6666 899999999762 1 457899999999999999887642211 23568999998753 689
Q ss_pred EEEEEeeecCC---CcceEEE--EEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC
Q 008686 130 PAVLYTGIDAG---NKQVQNL--AVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN 204 (557)
Q Consensus 130 ~~l~YTg~~~~---~~~~q~l--A~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~ 204 (557)
++|+|+..... ....+.+ +.+.| +.+|++ ..|++.+ + ....|+.++ + .+|+|||++....+
T Consensus 92 y~~~~s~~~~~~~~~~~~~~i~~~tt~D-----f~tft~--p~~~~~~--~---~~~ID~~v~-~-~~g~~Yl~~k~~~~ 157 (276)
T cd08983 92 YVVYWSSRLYDNTGGFYNYRLYATTTSD-----FVTFTE--PKVWIDL--G---ANVIDTTVV-K-VGGTYYRFYKNEGS 157 (276)
T ss_pred EEEEEecccCCCCCCCccEEEEEEecCc-----ccccCC--CeEeecC--C---CCeEeeEEE-E-eCCEEEEEEecCCC
Confidence 99999987542 1222333 33334 368886 3566652 2 366899854 4 35899999875432
Q ss_pred CccEEEEEEeCCCC-CCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEee
Q 008686 205 DTGLAILYRSKDFV-NWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSL 269 (557)
Q Consensus 205 ~~G~i~ly~S~Dl~-~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~ 269 (557)
+.|.+.+|++|. .|+...... .......|-|.+|+.+..| +|+|+++.
T Consensus 158 --~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~~-------------~y~L~~d~ 206 (276)
T cd08983 158 --KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNGG-------------GWYLYGDN 206 (276)
T ss_pred --CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCCC-------------EEEEEEEE
Confidence 458888999986 677654321 1223578999999998322 78887653
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.3e-12 Score=104.89 Aligned_cols=75 Identities=33% Similarity=0.438 Sum_probs=55.2
Q ss_pred cceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCCCCCCcceeEE---eecCCCCeEEEEEEEeCCeEE
Q 008686 429 CPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFL---DLDPVHEKLSIRSLIDRSIVE 505 (557)
Q Consensus 429 ~~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~~~~~~~~~~~---~~~~~~~~~~LrIfvD~S~vE 505 (557)
..+||.|+++.+.+|+|.|+||..+ +. +++||++|+.. ...+.++... ++...++.++||||||+|+||
T Consensus 9 ~~~g~~l~~s~~~~e~~~i~~d~~~---~~---l~vDR~~s~~~--~~~~~~~~~~~~~~~~~~~~~l~L~i~vD~SsvE 80 (86)
T PF08244_consen 9 DSFGLRLRASNDGGEETSIGYDPAN---GT---LTVDRTNSGIN--DFSEEFGTFVRSAPLDLGDKILKLRIFVDRSSVE 80 (86)
T ss_dssp CEEEEEEEEETTSSSEEEEEEETTT---TE---EEEEETTSSTT--SCCCEEEEEEEEEETTTTESEEEEEEEEETTEEE
T ss_pred CCeEEEEEECCCccEEEEEEEECCC---CE---EEEeCCCCccc--ccccccCcceEEeeccCCCCcEEEEEEEeCCEEE
Confidence 4789999999999999999999542 32 46799999722 2234444422 222224678999999999999
Q ss_pred EEecCC
Q 008686 506 SFGGGG 511 (557)
Q Consensus 506 VFvNdG 511 (557)
||+|||
T Consensus 81 iFvNdG 86 (86)
T PF08244_consen 81 IFVNDG 86 (86)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 999987
|
It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B .... |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.8e-10 Score=117.61 Aligned_cols=179 Identities=21% Similarity=0.217 Sum_probs=117.0
Q ss_pred CCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCcC-------CCceEeeeEEEccCCeEEEEEe
Q 008686 63 DPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFD-------ANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d-------~~gv~SGsav~~~dg~~~l~YT 135 (557)
||. ++.++|+|+||.... .+..++|+||+||+..+.+|.+...|. ..++|.+.++.. +|+++|||+
T Consensus 2 DP~-vi~~~~~YY~~~T~~-----g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~G~yylyys 74 (279)
T cd08988 2 DPV-IIKEGDTWYVFGTGP-----GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQH-NGKFYLYYS 74 (279)
T ss_pred CCE-EEEECCEEEEEEecC-----CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEEE-CCEEEEEEE
Confidence 894 778899999988732 578899999999999998886443332 357999999875 899999999
Q ss_pred eecCC-CcceEEEEEEcCCCCCcc-ceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEE
Q 008686 136 GIDAG-NKQVQNLAVPKNLSDPYL-KEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYR 213 (557)
Q Consensus 136 g~~~~-~~~~q~lA~s~d~~d~~l-~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~ 213 (557)
+.... ....+++|+|++...|.- ..|++ .++++..... ......||.+++. ++|++||++|+.. +.|.+.+
T Consensus 75 ~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~D-dDG~~Yl~~g~~~---~gi~~~e 147 (279)
T cd08988 75 VSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIFD-QHGQPWLSFGSFW---GGIKLFE 147 (279)
T ss_pred eccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEEc-CCCCEEEEecccC---CCEEEEE
Confidence 86532 346678999987654311 11443 2566653221 1234579996544 7899999998632 2244444
Q ss_pred -eCCCCCCEEcccc--cccC-CCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 214 -SKDFVNWTKAEQS--LYST-NQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 214 -S~Dl~~W~~~~~~--~~~~-~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
+.|+..-...+.. +... ......|-|-+++-+ | +++|..|..
T Consensus 148 L~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~S~g 193 (279)
T cd08988 148 LDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG--D-------------YYYLFVSFG 193 (279)
T ss_pred ECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC--C-------------eEEEEEEcC
Confidence 3454332111111 2111 123578999999987 5 888887753
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.5e-10 Score=116.23 Aligned_cols=131 Identities=15% Similarity=0.257 Sum_probs=93.3
Q ss_pred CCccCCcceEEE--CCEEEEEEEEe--cCC--CeEEEEEEeCCCCcceecCCCCCCCC-CcCCCceEeeeEEEccCCeEE
Q 008686 59 SWMNDPNGPMIY--KGIYHFFYQYK--LWD--TVVWGHSTSTDMVNWTPHDAAIYPSQ-PFDANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 59 gw~nDPnG~~~~--~G~YHlfyq~~--~~g--~~~Wgha~S~DlvhW~~~~~aL~P~~-~~d~~gv~SGsav~~~dg~~~ 131 (557)
.++-||. ++++ +|+||||.... .++ ...+.+.+|+||+||+..+.++.+.. .+...++|.+.++.. +|++|
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~-~G~yy 81 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEY-KGRYY 81 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeee-CCEEE
Confidence 4578995 6777 99999999865 111 34689999999999999998886543 355568999998864 99999
Q ss_pred EEEeeecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEee
Q 008686 132 VLYTGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGS 201 (557)
Q Consensus 132 l~YTg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga 201 (557)
|||+..... ....+++|+|++.. -.|+.....|+... .....||.+ |.+++|++||+++.
T Consensus 82 ly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~-----~~~~iDp~~-f~DdDG~~Yl~~~~ 142 (291)
T cd08981 82 MFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPE-----DWMCLDGTL-YVDEDGKPWMVFCH 142 (291)
T ss_pred EEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCC-----CCceEcCce-EEcCCCCEEEEEEe
Confidence 999876532 22346788887653 35776433344221 124579985 55578999999874
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=99.25 E-value=1e-10 Score=118.17 Aligned_cols=134 Identities=23% Similarity=0.359 Sum_probs=97.6
Q ss_pred CCccCCcceEEEC-CEEEEEEEEec---CCCeEEEEEEeCCCCcceecCCCCC-------CCCCcCCCceEeeeEEEccC
Q 008686 59 SWMNDPNGPMIYK-GIYHFFYQYKL---WDTVVWGHSTSTDMVNWTPHDAAIY-------PSQPFDANSCWSGSVTILPG 127 (557)
Q Consensus 59 gw~nDPnG~~~~~-G~YHlfyq~~~---~g~~~Wgha~S~DlvhW~~~~~aL~-------P~~~~d~~gv~SGsav~~~d 127 (557)
+.+.||. +++.+ |+|||||+... .....+++|+|+|+++|+..+..+. +...++...+.++.++..++
T Consensus 64 ~~~~~p~-v~~~~dg~~~~~Yt~~~~~~~~~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~ 142 (276)
T cd08979 64 GGVWTPS-VVRDPDGTYRMFYTGYDRPKGAVQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEE 142 (276)
T ss_pred CCeEcce-EEEcCCCeEEEEEecccCCCCCcceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEECC
Confidence 3467895 66777 99999999873 4467899999999999999875542 22344556788999987633
Q ss_pred -CeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 008686 128 -GNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSK 202 (557)
Q Consensus 128 -g~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~ 202 (557)
|+++|+|++........+.+|.|.|. ++|++....+ ....+.....+++|.+ ++ .+|+|+|++.+.
T Consensus 143 ~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~--~~~~~~~~~~~e~P~~-~~-~~g~~~l~~~~~ 209 (276)
T cd08979 143 GGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPP--GPRTGYDDGQLEVPQV-VK-IDGRWYLLYSGR 209 (276)
T ss_pred CCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCC--CCCCcccCCcCccceE-EE-ECCEEEEEEEec
Confidence 89999999876545577889998874 7999864322 1122223467899995 44 468999999875
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.21 E-value=6e-10 Score=116.02 Aligned_cols=166 Identities=16% Similarity=0.260 Sum_probs=115.4
Q ss_pred ccCCcceEEECCEEEEEEEEe--cC---CCeEEEEEEeCCCC-cceecC-CCCCCCC------------------CcCCC
Q 008686 61 MNDPNGPMIYKGIYHFFYQYK--LW---DTVVWGHSTSTDMV-NWTPHD-AAIYPSQ------------------PFDAN 115 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~--~~---g~~~Wgha~S~Dlv-hW~~~~-~aL~P~~------------------~~d~~ 115 (557)
+..| .+++++|+|||||+.. .. ...+.|+|+|++.. .|++.. ++|.|+. .||..
T Consensus 112 vwaP-~Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~w~~d~~~~~~~~~~g~wD~~ 190 (349)
T cd08992 112 VFTP-EVLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGIWKGDEDNRFLVKKKGSFDSH 190 (349)
T ss_pred eECc-EEEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCceeeccCceeEeccCCCcccC
Confidence 4467 4778999999999964 21 23578999988887 798764 4566642 36778
Q ss_pred ceEeeeEEEccCCeEEEEEeeecC-------CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEE
Q 008686 116 SCWSGSVTILPGGNPAVLYTGIDA-------GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAW 188 (557)
Q Consensus 116 gv~SGsav~~~dg~~~l~YTg~~~-------~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~ 188 (557)
++..++++.. +|++||||+|+.. ...+.+++|+|++.. ..|+|.+.+||+... + ..+ ||
T Consensus 191 ~v~~P~v~~~-~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GPf~r~~~nPi~~~~------~--~~~-~~ 256 (349)
T cd08992 191 KVHDPCLFPF-NGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GPYVKSPYNPITNSG------H--ETC-VW 256 (349)
T ss_pred ceECCEEEEE-CCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CCCEeCCCCcccCCC------C--ceE-EE
Confidence 8888888765 9999999999753 134678999998874 468998889998421 2 236 68
Q ss_pred ecCCCeE-EEEEeeecCCccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEec
Q 008686 189 IGPDKIW-RVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 189 ~~~~g~~-~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~ 245 (557)
+ .++.+ .|+. ....+.|. +..|+|+++|+-...+...+...+...|||-+.-.
T Consensus 257 ~-~~~~~~~~~~-~d~~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 257 Q-YKGGIAAMLT-TDGPEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred e-cCCceEEEEe-ccCCCCce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 8 45566 4544 33334454 77899999999776433323344566777776654
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.8e-09 Score=109.64 Aligned_cols=174 Identities=16% Similarity=0.177 Sum_probs=114.3
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCc------CCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPF------DANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~------d~~gv~SGsav~~~dg~~~l 132 (557)
+..-||. ++.++|.|+||+....+ ...+...+|+||+||+..+.++.....+ ...++|.+.++.. +|+++|
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~-~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~G~yy~ 82 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW-FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSYY-DGKFWL 82 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc-CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEEE-CCEEEE
Confidence 5567995 78899999999875311 1246788999999999998877543211 2357999999875 999999
Q ss_pred EEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEE
Q 008686 133 LYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILY 212 (557)
Q Consensus 133 ~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly 212 (557)
+|+.........+++|++++..+ .|+. |+... ....||.++ .+++|+.||+.+.. +.|.+.
T Consensus 83 yy~~~~~~~~~~i~va~sd~~~G----pw~~----~~~~~------~~~IDp~~f-~D~dG~~Yl~~~~~----~~i~l~ 143 (269)
T cd08989 83 IYTAVKVWKDCHNYLFTAEDITG----PWSR----PIFLN------YGGFDPSLF-HDDDGKKYLINMGW----SGIRLQ 143 (269)
T ss_pred EEeccccCCCceEEEEEECCCCC----CCcC----CEECC------CCcccCceE-EcCCCCEEEEecCC----CcEEEE
Confidence 99987433345678998876542 4653 44321 235799954 44789999998753 234454
Q ss_pred Ee-CCCCCCEEcccc----cccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 213 RS-KDFVNWTKAEQS----LYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 213 ~S-~Dl~~W~~~~~~----~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
+- .|...= .+.+ +.........|-|.+++.+ | +++|++|...
T Consensus 144 ~l~~~~~~~--~~~~~~~~~~~~~~~~~~Egp~~~k~~--G-------------~YYl~~S~~~ 190 (269)
T cd08989 144 EYSPAEKKL--IGKPLNKVIIKGTDDGLTEGPHLYKIN--G-------------KYYLTTAEGG 190 (269)
T ss_pred EEChhhCCC--CCCceeEEEecCCCCCccccceEEEEC--C-------------EEEEEEeeCC
Confidence 42 232110 1111 1111223478999999987 6 8888888643
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.6e-09 Score=110.10 Aligned_cols=169 Identities=14% Similarity=0.101 Sum_probs=113.4
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCC-----------cCCCceEeeeEEEccC
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQP-----------FDANSCWSGSVTILPG 127 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~-----------~d~~gv~SGsav~~~d 127 (557)
++.-||. +++++|+|+||.....+ ...+...+|+||+||+.++.++.+... .-..++|.+.++.. +
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~~~-~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~ 85 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTMHY-SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLRYH-N 85 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCccc-CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceEEE-C
Confidence 4557995 77889999999985421 134678899999999999877643221 11347999999875 9
Q ss_pred CeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCcc
Q 008686 128 GNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTG 207 (557)
Q Consensus 128 g~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G 207 (557)
|++||+|+... ..+.+|+|++.. ..|+.. +++. ...||.++ .+++|+.||+++..
T Consensus 86 gkyy~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~~---------~~iDp~~f-~D~dG~~Yl~~~~~----- 140 (269)
T cd09001 86 GTFYVFFCTNT----GGTYIYTADDPE----GPWTKT--ALDG---------GYHDPSLL-FDDDGTAYLVYGGG----- 140 (269)
T ss_pred CEEEEEEEecC----CCeEEEEcCCCC----CCCcCC--CcCC---------CcccCceE-EcCCCCEEEEeCCC-----
Confidence 99999999862 346788887653 356543 1221 45799954 44789999999753
Q ss_pred EEEEEE-eCCCCCCEEcccccccCC--CCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 208 LAILYR-SKDFVNWTKAEQSLYSTN--QSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 208 ~i~ly~-S~Dl~~W~~~~~~~~~~~--~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
.|.+.+ ++|+....-....+.... .....|-|.+++-+ | +++|++|..
T Consensus 141 ~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G-------------~YYl~~S~~ 191 (269)
T cd09001 141 TIRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--G-------------YYYIFNIAW 191 (269)
T ss_pred cEEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--C-------------EEEEEEecC
Confidence 345555 566665521111222221 13578999999876 5 888888875
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.2e-09 Score=110.05 Aligned_cols=188 Identities=14% Similarity=0.133 Sum_probs=120.8
Q ss_pred CCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCC--CCCC-CcCCCceEeeeEEEccCCeEEEEEeeecC
Q 008686 63 DPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAI--YPSQ-PFDANSCWSGSVTILPGGNPAVLYTGIDA 139 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL--~P~~-~~d~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (557)
||. ++.++++|+|++.... .....++|+||+||+.....+ .+.. .+...++|++.++.. +|+++|+|+....
T Consensus 2 DP~-v~~~~d~yY~~~T~~~---~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~~-~g~yylyys~~~~ 76 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE---DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHYI-DGKWYIYFAAGDG 76 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC---CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEEE-CCEEEEEEEccCC
Confidence 895 6788889999987431 568899999999999875332 2322 234568999999875 8999999997753
Q ss_pred --CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC---CccEEEEEEe
Q 008686 140 --GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN---DTGLAILYRS 214 (557)
Q Consensus 140 --~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~---~~G~i~ly~S 214 (557)
...+.+++|++++..++ +..|+.. .+++.... ..-.||.+ +.+ +|++||+++.... ....|.+.+.
T Consensus 77 ~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~~----~~~iDp~~-~~d-dG~~Yl~~~~~~~~~~~~~~i~~~~l 147 (288)
T cd08980 77 GGNANHRMYVLENAGADPP-TGPWTFK--GRLADPTD----RWAIDGTV-FEH-NGQLYFVWSGWEGRTNGNQNLYIAKM 147 (288)
T ss_pred CCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCCC----CeeeeeEE-EEE-CCEEEEEEEccCCCCCCCccEEEEEC
Confidence 23456778887652112 3578873 34442211 23469995 453 5999999876432 2234666676
Q ss_pred CCCCCCEEcccc--cccCCC------CCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEEE
Q 008686 215 KDFVNWTKAEQS--LYSTNQ------SGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGT 281 (557)
Q Consensus 215 ~Dl~~W~~~~~~--~~~~~~------~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG~ 281 (557)
++...+. +.+ +..+.. ....|-|.+++.+ | +++|++|........|.+|-
T Consensus 148 ~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~--G-------------~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 148 SNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN--G-------------KVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred CCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC--C-------------EEEEEEECCCCCCCCCEEEE
Confidence 6544443 322 222111 1457999999997 6 88898887544344566654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.2e-09 Score=109.16 Aligned_cols=174 Identities=14% Similarity=0.097 Sum_probs=111.2
Q ss_pred CccCCcceEEE-CCEEEEEEEEecCC---------CeEEEEEEeCCCCcceecCCCCCCCCC------------cCCCce
Q 008686 60 WMNDPNGPMIY-KGIYHFFYQYKLWD---------TVVWGHSTSTDMVNWTPHDAAIYPSQP------------FDANSC 117 (557)
Q Consensus 60 w~nDPnG~~~~-~G~YHlfyq~~~~g---------~~~Wgha~S~DlvhW~~~~~aL~P~~~------------~d~~gv 117 (557)
|+-||. ++.. +|.|+|+......+ ......++|+||+||+.++.++.+... +...++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 688996 5555 67999998865211 345779999999999999887754321 235689
Q ss_pred EeeeEEEccCCeEEEEEeeecCC-CcceEEEEEEcCCCCCccceeecCCCC-ceEecCCCCCCCCccCCeEEEecCCCeE
Q 008686 118 WSGSVTILPGGNPAVLYTGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPEN-PLMVPADQIDPGSFRDPTTAWIGPDKIW 195 (557)
Q Consensus 118 ~SGsav~~~dg~~~l~YTg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~-Pvi~~p~~~~~~~fRDP~V~~~~~~g~~ 195 (557)
|.+.+... +|+++|+|+..... ....+++|++++.. ..|+..... |+ ..-.||.+ |.+++|++
T Consensus 80 WAP~v~~~-~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~-f~D~DG~~ 144 (269)
T cd08986 80 WAPELHYI-KGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSL-FEDDDGKV 144 (269)
T ss_pred CCceEEEE-CCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCce-EEcCCCCE
Confidence 99999875 89999999976532 23456777776543 346653221 11 23479985 55578999
Q ss_pred EEEEeeecCCccEEEEEEeCCCCCCEEcccccccC----CCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 196 RVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYST----NQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 196 ~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~----~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
||+++.. .+ .--+.|+....-....+... ......|-|.+++.+ | +++|++|..
T Consensus 145 Yl~~~~~-----~i-~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYL~yS~~ 202 (269)
T cd08986 145 YLVWHNT-----LI-ARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYG--G-------------KYYLFGTAW 202 (269)
T ss_pred EEEeeCC-----ce-EeccCccccccCCcEEEecccccccCCccccccEEEEEC--C-------------EEEEEEeec
Confidence 9998753 11 11245554432111111111 012357999999976 5 889998863
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.1e-09 Score=107.55 Aligned_cols=151 Identities=17% Similarity=0.244 Sum_probs=115.3
Q ss_pred ccCCcceEEECCEEEEEEEEe------cCCCeEEEEEEeCCCCc-ceecC-CCCCC-CCCcCCCceEeeeEEEccCCeEE
Q 008686 61 MNDPNGPMIYKGIYHFFYQYK------LWDTVVWGHSTSTDMVN-WTPHD-AAIYP-SQPFDANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~------~~g~~~Wgha~S~Dlvh-W~~~~-~aL~P-~~~~d~~gv~SGsav~~~dg~~~ 131 (557)
.-.| +++..++++||+|+-. .-...|.+.|.|+|+++ |+..+ +.+.| ..++|..||.++.++.. +++++
T Consensus 31 vFNp-av~~~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~I-~~~y~ 108 (314)
T COG2152 31 VFNP-AVVLVGGELLLLYRVVEGYYEDHSSISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTKI-GGRYY 108 (314)
T ss_pred Eecc-eeEEECCEEEEEEEEeccccccCccceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEEE-CCEEE
Confidence 4467 7889999999999983 33467999999999999 98774 67899 66788899999999986 99999
Q ss_pred EEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC---CccE
Q 008686 132 VLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN---DTGL 208 (557)
Q Consensus 132 l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~---~~G~ 208 (557)
|.|||.+ +..+..++|+++|. .+|+|. .+++.+ +.||-..+-...+|+|.|+---... ..+-
T Consensus 109 mtYTa~s-~~g~~~~la~t~~f-----~n~~ri--g~i~~p-------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~n 173 (314)
T COG2152 109 MTYTAYS-DKGPRLALAVTKDF-----LNWERI--GAIFPP-------DNKDAALFPKKINGKYALLHRPVLGEYGMKGN 173 (314)
T ss_pred EEEEecC-CCCcccchhhhhhh-----hhhhhc--ccccCC-------CCCCceEeeEEecCcEEEEEeecccccCccCc
Confidence 9999986 35677899999884 789995 344432 2355542212247889888654332 2568
Q ss_pred EEEEEeCCCCCCEEcccccc
Q 008686 209 AILYRSKDFVNWTKAEQSLY 228 (557)
Q Consensus 209 i~ly~S~Dl~~W~~~~~~~~ 228 (557)
|++..|.|+.+|.....++.
T Consensus 174 iwia~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 174 IWIAFSPDLEHWGIHRKLLG 193 (314)
T ss_pred eEEEEcCCccCCCccceeec
Confidence 99999999999998765554
|
|
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.4e-09 Score=108.69 Aligned_cols=98 Identities=18% Similarity=0.285 Sum_probs=76.7
Q ss_pred eeeEEEccCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEec--CCCCCCCCccCCeEEEecCCCeEE
Q 008686 119 SGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP--ADQIDPGSFRDPTTAWIGPDKIWR 196 (557)
Q Consensus 119 SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~--p~~~~~~~fRDP~V~~~~~~g~~~ 196 (557)
.+.++. .+|+++|||++........+++|+|+|+ .+|++.+ +|++.+ ...++...++||.|+ + .+|+||
T Consensus 2 nP~v~~-~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~ 72 (268)
T cd08993 2 NPAVVY-DNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYY 72 (268)
T ss_pred cCeEEE-ECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEE
Confidence 456666 4999999999876556778999999985 7999975 566543 234556789999965 4 478999
Q ss_pred EEEeeec--CCccEEEEEEeCCCCCCEEccc
Q 008686 197 VIIGSKI--NDTGLAILYRSKDFVNWTKAEQ 225 (557)
Q Consensus 197 m~~ga~~--~~~G~i~ly~S~Dl~~W~~~~~ 225 (557)
|++++.. ....+|.+++|+|+.+|++.+.
T Consensus 73 m~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~ 103 (268)
T cd08993 73 ITYAARPNAPNGTRIGLATTKDFITFERLGT 103 (268)
T ss_pred EEEEccCCCCCCcEEEEEEeCCcceEEEecc
Confidence 9998865 3456899999999999999864
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.06 E-value=7.5e-09 Score=105.82 Aligned_cols=121 Identities=19% Similarity=0.224 Sum_probs=86.1
Q ss_pred CccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecC
Q 008686 60 WMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDA 139 (557)
Q Consensus 60 w~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (557)
..-|| .+++.+|+|+|+.....+ ...+...+|+||+||+.++.++.+. ..++|.+.++. .+|+++|+|+....
T Consensus 14 ~~~DP-~i~~~~~~yY~~~t~~~~-~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~~-~~gkyy~yys~~~~ 86 (280)
T cd09002 14 DYPDP-SILRDGEDYYMTHSSFKY-TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLCK-YDGRYYIYFPAIPE 86 (280)
T ss_pred CCCCC-EEEEECCEEEEEEcchhc-CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeEE-ECCEEEEEEEeecC
Confidence 34599 578899999997663211 2357888999999999988877542 34789999876 49999999998765
Q ss_pred CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEee
Q 008686 140 GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGS 201 (557)
Q Consensus 140 ~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga 201 (557)
.....+.+|++.+.. ..|++ |+... .....||.+++. ++|++||+++.
T Consensus 87 ~~~~~~~va~ad~p~----Gpw~~----~~~~~-----~~~~IDp~vf~D-ddG~~Yl~~~~ 134 (280)
T cd09002 87 GGNWTNMVIWADSPE----GPWSK----PIDLK-----IGGCIDPGHVVD-EDGNRYLFLSG 134 (280)
T ss_pred CCCceEEEEEECCCC----CCCcC----CEecC-----CCCccCCceEEc-CCCCEEEEECC
Confidence 445667889887653 34664 22111 112369996554 78999999864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.7e-08 Score=101.97 Aligned_cols=213 Identities=16% Similarity=0.160 Sum_probs=127.0
Q ss_pred CCCCCCCCCCcccccccCCCCCccC------CcceEE-ECCEEEEEEEEe--------cCCCeEEEEEEeCCCC----cc
Q 008686 39 FSSSITSQPYRTGYHFQPPSSWMND------PNGPMI-YKGIYHFFYQYK--------LWDTVVWGHSTSTDMV----NW 99 (557)
Q Consensus 39 ~~~~~~~~~~rp~yH~~p~~gw~nD------PnG~~~-~~G~YHlfyq~~--------~~g~~~Wgha~S~Dlv----hW 99 (557)
+|+..+.+..-+.+-...+.=|+.| +.|-+. ++|.--+|-... .|+..|+++..|++.. +|
T Consensus 34 ~~~~~tipnI~~~~~~~~~dldVWDsWPLqd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY~k~G~~~~~~W 113 (428)
T PF02435_consen 34 YFNASTIPNIPAAFPVMADDLDVWDSWPLQDADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFYSKDGDNANDGW 113 (428)
T ss_dssp SBGGGG----GCGEEECTTE-EEEEEEEEE-TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEEEETT--SGGG-
T ss_pred CCccccCCccCccccccccceeeeccceeecccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEEecCCCCccCCc
Confidence 3444444444445555566667765 444444 478444555544 3678999999999999 99
Q ss_pred eecCCCCCCCCCc-CCCceEeeeEEEcc-CCeEEEEEeeecC--C--CcceE---E--EEEEcCCCCCccceeecCCCCc
Q 008686 100 TPHDAAIYPSQPF-DANSCWSGSVTILP-GGNPAVLYTGIDA--G--NKQVQ---N--LAVPKNLSDPYLKEWIKPPENP 168 (557)
Q Consensus 100 ~~~~~aL~P~~~~-d~~gv~SGsav~~~-dg~~~l~YTg~~~--~--~~~~q---~--lA~s~d~~d~~l~~w~k~~~~P 168 (557)
+..+.++..+... ...--|||||+... ||++.||||.+.. . ..|+. + ++.+.+. ..-+..|+++ ..
T Consensus 114 ~~~G~vf~~g~~~~~~s~EWSGSA~l~~~dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~i~g~~~~--~~ 190 (428)
T PF02435_consen 114 KNGGPVFPEGASFVPGSREWSGSATLNNDDGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVWITGFSNH--HE 190 (428)
T ss_dssp EEEEESS-TTCCCCGCEEEEEEEEEESTTTSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEEEEEEEEE--EE
T ss_pred eECcccCCCCCCCCccCcEecCceEEcCCCCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-ceeEccccce--eE
Confidence 9999877554431 22346999999986 7999999999654 1 22322 1 2222221 1223455553 35
Q ss_pred eEecCCCCC-------CCCccCCeEEEecCCCeEEEEEeeec---C------------------------------CccE
Q 008686 169 LMVPADQID-------PGSFRDPTTAWIGPDKIWRVIIGSKI---N------------------------------DTGL 208 (557)
Q Consensus 169 vi~~p~~~~-------~~~fRDP~V~~~~~~g~~~m~~ga~~---~------------------------------~~G~ 208 (557)
++.++..++ ...||||++|-...+|+-||+.-+.. + ..|+
T Consensus 191 lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~ 270 (428)
T PF02435_consen 191 LFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGA 270 (428)
T ss_dssp EES--SSSB--HHHHHH---EEEEEEEETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEE
T ss_pred eeccchhhhhChhhcCCccccCCeeEECCCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecce
Confidence 555332221 25799999643336889999884322 0 1478
Q ss_pred EEEEEeCC--CCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEee
Q 008686 209 AILYRSKD--FVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSL 269 (557)
Q Consensus 209 i~ly~S~D--l~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~ 269 (557)
|.|.+.+| +..|+...+++.+..-....|-|+++.++ | ||+|+.+.
T Consensus 271 iGi~~~~~~~~~~w~~~~PL~~a~~v~de~ERP~iv~~~--g-------------kyYLFt~s 318 (428)
T PF02435_consen 271 IGIAKLTNDDGTVWELLPPLLSANGVNDELERPHIVFMN--G-------------KYYLFTIS 318 (428)
T ss_dssp EEEEEESTTTTSEEEEEEEEEEETTTBS-EEEEEEEEET--T-------------EEEEEEEE
T ss_pred eeeEEecCCCCCccEEeCcceecccccccccCCcEEEEC--C-------------EEEEEEEe
Confidence 99999865 45799987555544445689999999998 7 99988654
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A .... |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=98.90 E-value=1e-07 Score=95.81 Aligned_cols=201 Identities=19% Similarity=0.351 Sum_probs=128.1
Q ss_pred ccCCCCC---ccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCC----CCCCcCCCceEeeeEEE-c
Q 008686 54 FQPPSSW---MNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIY----PSQPFDANSCWSGSVTI-L 125 (557)
Q Consensus 54 ~~p~~gw---~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~----P~~~~d~~gv~SGsav~-~ 125 (557)
..|+.|| +.||- +++++|+||||-..+. ...|+-+-+. |++|+..+.|+. +.. ...+.|.+.++. .
T Consensus 14 ~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~--~~~~~s~~~S-f~~Ws~~g~A~q~~l~~~~--~~~~fwAPqVfyf~ 87 (303)
T cd08987 14 ISPKSDWIVAIKDPT-VVYYNGRYHVYATTAD--AGNYGSMYFN-FTDWSQAASATQYYLQNGN--MTGYRVAPQVFYFA 87 (303)
T ss_pred ccCCCCCeeeecCCe-EEEECCEEEEEEccCC--CCCceeeeec-ccCHhHhccchhhcccCCC--CCcccccCEEeeec
Confidence 4677899 68995 6788999999999762 1234333333 999998886652 222 234578898873 2
Q ss_pred cCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCC
Q 008686 126 PGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND 205 (557)
Q Consensus 126 ~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~ 205 (557)
+++++||+|+.. ..++|+|.|..+| ..|.. ..|++...........-|+.|+ . ++++.||+... .
T Consensus 88 pk~kwYL~Yq~~------~~~yaTs~dp~~P--~~ws~--~qpl~~~~~~~~~~~~ID~~vI-~-Dd~~~YLff~~---d 152 (303)
T cd08987 88 PQNKWYLIYQWW------PAAYSTNSDISNP--NGWSA--PQPLFSGTPNGSPGGWIDFWVI-C-DDTNCYLFFSD---D 152 (303)
T ss_pred cCCEEEEEEecC------ceEEEeCCCCCCC--CccCC--CcccccCcccCCCCCccceeEE-e-CCCCEEEEEec---C
Confidence 589999999951 1468999998877 46776 4688753222233456899974 3 47788888753 2
Q ss_pred ccEEEEEEeC-CCCCCEEc-cc--cccc-CCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEE
Q 008686 206 TGLAILYRSK-DFVNWTKA-EQ--SLYS-TNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIG 280 (557)
Q Consensus 206 ~G~i~ly~S~-Dl~~W~~~-~~--~~~~-~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG 280 (557)
.| .||+|+ .+.+.... +. .+.. ......+|-|++++++ |. .+++|++++.+..+..|+++
T Consensus 153 nG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~--G~-----------~~YlmiveA~g~~~~rYfrs 217 (303)
T cd08987 153 NG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVK--GQ-----------NQYLLIVEAIGSDGGRYFRS 217 (303)
T ss_pred CC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEEC--CC-----------eEEEEEEEecCCCCCCeEEE
Confidence 35 467763 22222110 11 1121 1234689999999998 52 38999999876544568888
Q ss_pred EEecC--CCeEee
Q 008686 281 TYNIT--TDTYIA 291 (557)
Q Consensus 281 ~~d~~--~~~F~~ 291 (557)
+-.. .|+|+|
T Consensus 218 -~Ts~Sl~GpWt~ 229 (303)
T cd08987 218 -WTATSLDGPWTP 229 (303)
T ss_pred -EEcCCCCCCcee
Confidence 4322 345554
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.88 E-value=9.3e-08 Score=98.51 Aligned_cols=170 Identities=16% Similarity=0.208 Sum_probs=103.1
Q ss_pred cCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCCC
Q 008686 62 NDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGN 141 (557)
Q Consensus 62 nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~~ 141 (557)
-||. ++.++|+|+|+-... + ++.+|+||++|+..+.++. ..++|.+++... +|++|++|+..
T Consensus 4 ~DP~-i~~~~g~YY~~~T~~--~----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~~-~g~~Y~~~~~~---- 65 (295)
T cd08982 4 ADPV-VILFKGEYYLFASMS--G----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFVY-DGTLYYTASTY---- 65 (295)
T ss_pred CCCe-EEEECCEEEEEEeCC--C----CeEECCCcCCceECCcccC------CCCcCcCEEEEE-CCEEEEEEeCC----
Confidence 5995 778899999887742 1 3689999999999987764 457999999875 88876655532
Q ss_pred cceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEE--------
Q 008686 142 KQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYR-------- 213 (557)
Q Consensus 142 ~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~-------- 213 (557)
.+.+|+|.+...+ .|+.. .+ . ......||.++ .+++|+.||++|.+.. +.|.+.+
T Consensus 66 --~~~v~~s~~p~gp---~w~~~--~~----~---~~~~~IDp~vf-~DdDGk~Yl~~g~~~~--~~i~~~eL~~d~~~~ 128 (295)
T cd08982 66 --NSRIYKTADPLSG---PWEEV--DK----S---FPPGLADPALF-IDDDGRLYLYYGCSNN--YPLRGVEVDPDTFRP 128 (295)
T ss_pred --CceEEEeCCCCCC---Ccccc--cc----c---cCCCccCCceE-ECCCCCEEEEEecCCC--CCeEEEEECcccCCc
Confidence 2357887765321 35432 01 0 11345799964 4468999999875321 1122222
Q ss_pred ----------eCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEEE
Q 008686 214 ----------SKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGT 281 (557)
Q Consensus 214 ----------S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG~ 281 (557)
+..-..|+..+.-..........|-|-+++-+ | +++|++|........|.+|-
T Consensus 129 ~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EGP~i~k~~--G-------------~YYL~yS~~~~~~~~Y~v~~ 191 (295)
T cd08982 129 IGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEGAWMTKHN--G-------------KYYLQYAAPGTEFNTYADGV 191 (295)
T ss_pred cCcceEEEeCCCCCcCeEecCcccccccCCccccccEEEEEC--C-------------EEEEEEeCCCcccCcEeEEE
Confidence 22223455433211101123357888888866 5 88888886543334455553
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.5e-07 Score=91.30 Aligned_cols=130 Identities=21% Similarity=0.243 Sum_probs=88.5
Q ss_pred ccCCcceEEECCEEEEEEEEe-cC--CCeEEEEEEeCCCCcceecC--CCCCCCCCcCCCceEeeeEEEcc-CCeEEEEE
Q 008686 61 MNDPNGPMIYKGIYHFFYQYK-LW--DTVVWGHSTSTDMVNWTPHD--AAIYPSQPFDANSCWSGSVTILP-GGNPAVLY 134 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~-~~--g~~~Wgha~S~DlvhW~~~~--~aL~P~~~~d~~gv~SGsav~~~-dg~~~l~Y 134 (557)
+-.|+ ++..+|+|||||..+ .. .....++|+|+|+++|++.+ +.+.+...++...+-.+.++.++ +|+++|+|
T Consensus 62 ~~sgs-~~~~~g~~~l~YTg~~~~~~~~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~ 140 (280)
T cd08995 62 IGTGS-VIKGEGTYHAFYTGHNLDGKPKQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLL 140 (280)
T ss_pred ceEeE-EEeeCCEEEEEEEEECCCCCCcEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEE
Confidence 44564 567899999999987 32 35679999999999999875 33432333444445577777653 58999999
Q ss_pred eeecC----CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec
Q 008686 135 TGIDA----GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI 203 (557)
Q Consensus 135 Tg~~~----~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~ 203 (557)
.+... .....+.++.|+| |++|+.. ++++.+.. ...+.-|.+ ++ .+|+|+|+++.+.
T Consensus 141 g~~~~~~~~~~~g~i~~~~S~D-----l~~W~~~--~~~~~~~~---~~~~E~P~l-~~-~~g~~~L~~s~~~ 201 (280)
T cd08995 141 ATRLLDGPYNRRGCIALFTSKD-----LKNWEYE--EPFYAPGL---YFMPECPDL-FK-MGDWWYLVYSEFS 201 (280)
T ss_pred EeccCCCCCCCCeEEEEEEeCC-----cCcceec--CceecCCC---cceeecceE-EE-ECCEEEEEEEecc
Confidence 87643 2334566777877 4799874 46654322 234678884 45 5789999998764
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.5e-06 Score=88.64 Aligned_cols=153 Identities=13% Similarity=0.105 Sum_probs=99.3
Q ss_pred ccCCcceEEECCEEEEEEEEecC--CCeEEEEEEeCCCC-cceecCCCC-C-CCCCcCCCceEeeeEEEccCCeEEEEEe
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKLW--DTVVWGHSTSTDMV-NWTPHDAAI-Y-PSQPFDANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~~--g~~~Wgha~S~Dlv-hW~~~~~aL-~-P~~~~d~~gv~SGsav~~~dg~~~l~YT 135 (557)
+..| -+++++|+|||||..+.. ....+++|+|+|.. .|+..+..+ . +.. ..++..++++.++||++||+|.
T Consensus 62 ~waP-~v~~~~g~y~~~y~~~~~~~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~~---~~~~~Dp~v~~d~dG~~Yl~~~ 137 (287)
T cd08999 62 FWAP-DVSYVNGKYVLYYSARDKGSGGQCIGVATADSPLGPFTDHGKPPLCCPEG---EGGAIDPSFFTDTDGKRYLVWK 137 (287)
T ss_pred ccCc-eEEEECCEEEEEEEeecCCCCCEEEEEEECCCCCCCCccCCcceEecCCC---CCCccCCCeEECCCCCEEEEEe
Confidence 5567 478899999999998833 46789999999975 999875432 2 222 2346778888876899999997
Q ss_pred eecCC--CcceEEEE-EEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec--CC--ccE
Q 008686 136 GIDAG--NKQVQNLA-VPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI--ND--TGL 208 (557)
Q Consensus 136 g~~~~--~~~~q~lA-~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~--~~--~G~ 208 (557)
+.... ..+.+.++ .+.|. .+|... ...++.+...+....+.-|.+ ++ .+|+|||++.+.. .. .=+
T Consensus 138 ~~~~~~~~~~~i~~~~ls~d~-----~~~~~~-~~~i~~~~~~~~~~~~EgP~i-~k-~~g~yyl~~S~~~~~~~~~~y~ 209 (287)
T cd08999 138 SDGNSIGKPTPIYLQELSADG-----LTLTGE-PVRLLRNDEDWEGPLVEAPYL-VK-RGGYYYLFYSAGGCCSGASTYA 209 (287)
T ss_pred ccCCCCCCCceEEEEEeCCCC-----ccccCC-cEeeecccccccCCceEeeEE-EE-ECCEEEEEEEcCCccCCCCCEE
Confidence 64321 12224444 44442 566542 223433322233345778985 45 4899999997653 21 235
Q ss_pred EEEEEeCCCC-CCEEccc
Q 008686 209 AILYRSKDFV-NWTKAEQ 225 (557)
Q Consensus 209 i~ly~S~Dl~-~W~~~~~ 225 (557)
+.+++|+++. .|+....
T Consensus 210 i~~~~s~~~~Gpw~~~~~ 227 (287)
T cd08999 210 VGVARSKSLLGPYVKAPG 227 (287)
T ss_pred EEEEEeCCCcCCcCCCCC
Confidence 7889999986 7887543
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=98.59 E-value=5.1e-06 Score=84.54 Aligned_cols=150 Identities=11% Similarity=0.040 Sum_probs=96.9
Q ss_pred CCccCCcceEEECCEEEEEEEEe-cCCCeEEEEEEeCCCC-cceecCCC-CCCCCCcCCCceEeeeEEEccCCeEEEEEe
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYK-LWDTVVWGHSTSTDMV-NWTPHDAA-IYPSQPFDANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~-~~g~~~Wgha~S~Dlv-hW~~~~~a-L~P~~~~d~~gv~SGsav~~~dg~~~l~YT 135 (557)
+-+..|. +++++|+|||||... ..+....++|+|+|.. .|+..... +.+ ...+...+.+++++.++||+++|+|.
T Consensus 62 ~~~wAP~-i~~~~g~yy~yy~~~~~~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~yl~~~ 139 (274)
T cd08990 62 GQAWAPD-VVEKNGKYYLYFPARDKDGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAYLYWG 139 (274)
T ss_pred CCcCcCe-EEEECCEEEEEEEeecCCCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEEEEEC
Confidence 4466785 788999999999987 3346789999999977 89987543 332 22233456788888876899999998
Q ss_pred eecCCCcceEEEE-EEcCCCCCccceeecCCCCceEecC---CCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEE
Q 008686 136 GIDAGNKQVQNLA-VPKNLSDPYLKEWIKPPENPLMVPA---DQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAIL 211 (557)
Q Consensus 136 g~~~~~~~~q~lA-~s~d~~d~~l~~w~k~~~~Pvi~~p---~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~l 211 (557)
+. +.+.++ .+.| +.+|+.. ..++..+ .......+.=|.+ ++ .+|+|||++.+.. ...+.+
T Consensus 140 ~~-----~~~~~~~l~~d-----~~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~~~~~ 203 (274)
T cd08990 140 GG-----LGLRVAKLKPD-----MLSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PEEIAY 203 (274)
T ss_pred Cc-----CCEEEEEeCcc-----ccccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--CcEEEE
Confidence 64 223444 3333 3567642 2233211 1111223457874 45 5899999998743 456778
Q ss_pred EEeCCCC-CCEEcccc
Q 008686 212 YRSKDFV-NWTKAEQS 226 (557)
Q Consensus 212 y~S~Dl~-~W~~~~~~ 226 (557)
.+|+++. -|+..+.+
T Consensus 204 a~s~~p~GP~~~~g~~ 219 (274)
T cd08990 204 ATSDSPLGPFTYRGVI 219 (274)
T ss_pred EEcCCCCCCcccCcEE
Confidence 8888874 57765543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.56 E-value=7.4e-06 Score=84.07 Aligned_cols=152 Identities=14% Similarity=0.119 Sum_probs=93.7
Q ss_pred CccCCcceEEECCEEEEEEEEe-cC-CCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEee
Q 008686 60 WMNDPNGPMIYKGIYHFFYQYK-LW-DTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTG 136 (557)
Q Consensus 60 w~nDPnG~~~~~G~YHlfyq~~-~~-g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg 136 (557)
.+..| -+++.+|+|||||... .+ ....+++|+|+|.. .|+..+..+.+.. .....++++.++||++||+|+.
T Consensus 54 ~~waP-~v~~~~g~yyl~ys~~~~~~~~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~~~~ 128 (294)
T cd08991 54 GFWAP-EVYYYNGKFYMYYSANDRDEKTEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLYYSR 128 (294)
T ss_pred cEEcc-EEEEECCEEEEEEEeccCCCCcceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEEEEe
Confidence 45578 4889999999999987 22 46789999999987 8887654433322 2356789988767999999986
Q ss_pred ecCCC--cceEEEEEEcCCCCCccceeecCCCC---ceEec-------C-C---CCCCCCccCCeEEEecCCCeEEEEEe
Q 008686 137 IDAGN--KQVQNLAVPKNLSDPYLKEWIKPPEN---PLMVP-------A-D---QIDPGSFRDPTTAWIGPDKIWRVIIG 200 (557)
Q Consensus 137 ~~~~~--~~~q~lA~s~d~~d~~l~~w~k~~~~---Pvi~~-------p-~---~~~~~~fRDP~V~~~~~~g~~~m~~g 200 (557)
..... ......+.+.|. .+|...... |+..+ + . ..+.....-|.+ ++ .+|+|||++.
T Consensus 129 ~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys 201 (294)
T cd08991 129 NNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTV-LK-HNGRYYLTYS 201 (294)
T ss_pred cCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEE-EE-ECCEEEEEEE
Confidence 54321 123344555553 455421111 11111 0 0 011123456774 44 4789999987
Q ss_pred eec-C-CccEEEEEEeCCC-CCCEEc
Q 008686 201 SKI-N-DTGLAILYRSKDF-VNWTKA 223 (557)
Q Consensus 201 a~~-~-~~G~i~ly~S~Dl-~~W~~~ 223 (557)
+.. . ..-.+.+++|+++ -.|+..
T Consensus 202 ~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 202 ANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred CCCCCCCCceEEEEEcCCCCCCcEec
Confidence 543 1 1125778888874 679875
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.5e-06 Score=84.73 Aligned_cols=155 Identities=14% Similarity=0.101 Sum_probs=98.5
Q ss_pred CCCccCCcceEEECCEEEEEEEEe--cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEe
Q 008686 58 SSWMNDPNGPMIYKGIYHFFYQYK--LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 58 ~gw~nDPnG~~~~~G~YHlfyq~~--~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YT 135 (557)
.+.+.+|. +++++|+|||||... .....+.+.|+|+|+.+|....... +... ...++..++++.++||++||+|.
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~~~~~~i~~a~s~d~~g~~~~~~~~-~~~~-~~~~~iDp~vf~d~dg~~yl~~~ 132 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFDYNGSGIGVATSEDPTGPFEDKVIR-PPTS-NNGNSIDPTVFKDDDGKYYLYYG 132 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCCCCcccEEEEECCCCCCCccccccC-cCcc-CCCCccCcceEEcCCCCEEEEEe
Confidence 45678995 788999999999987 2346789999999999997654211 1111 22457889999876699999998
Q ss_pred eecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC--CccEEEEE
Q 008686 136 GIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN--DTGLAILY 212 (557)
Q Consensus 136 g~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~--~~G~i~ly 212 (557)
+.... ....+.++.+.+. ..+.. ..+++..........+..|.+ ++ .+|+|||++.+... ..-.+.++
T Consensus 133 ~~~~~~~~~~i~~~~l~~~-----~~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~~~~ 203 (271)
T cd08978 133 SGDPGAGFGGIYISELTDD-----LTKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNIGYA 203 (271)
T ss_pred cccCCCCCCcEEEEEECcc-----ccccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceEEEE
Confidence 76421 2334556665543 12222 223321111112235678985 45 47899999876542 23467888
Q ss_pred EeCCCC-CCEEcc
Q 008686 213 RSKDFV-NWTKAE 224 (557)
Q Consensus 213 ~S~Dl~-~W~~~~ 224 (557)
+|++.. -|+..+
T Consensus 204 ~s~~~~Gp~~~~~ 216 (271)
T cd08978 204 TSDSIDGPYVKKG 216 (271)
T ss_pred ECCCCCCCcCcCC
Confidence 898864 466543
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=98.49 E-value=8.9e-07 Score=91.86 Aligned_cols=103 Identities=17% Similarity=0.290 Sum_probs=80.5
Q ss_pred CCceEeeeEEEccCCe--EEEEEeeecCCCcc-eEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEec
Q 008686 114 ANSCWSGSVTILPGGN--PAVLYTGIDAGNKQ-VQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIG 190 (557)
Q Consensus 114 ~~gv~SGsav~~~dg~--~~l~YTg~~~~~~~-~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~ 190 (557)
...||.+.|++. +|. ++|+|.+....... .+++|.|.|+ ++|++. .+||+.|...++.....||-|+..
T Consensus 29 ~~~vfNpgai~~-~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~i- 100 (312)
T PF04041_consen 29 PNAVFNPGAIVF-DGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTKI- 100 (312)
T ss_dssp SSEEEEEEEEEE-TTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEEE-
T ss_pred cceEEcCcEEEE-CCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEEE-
Confidence 456999999875 555 89999887665444 8999999996 689886 479997766667778999997755
Q ss_pred CCCeEEEEEeeecCCccEEEEEEeCCCCCCEEccc
Q 008686 191 PDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQ 225 (557)
Q Consensus 191 ~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~ 225 (557)
+++|||++.+......++.+.+|+|+.+|+..+.
T Consensus 101 -~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~ 134 (312)
T PF04041_consen 101 -DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGK 134 (312)
T ss_dssp -TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEEC
T ss_pred -CCEEEEEEEEecCCCcccceEEccchHhhEEecc
Confidence 6799999988776566889999999999999874
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=98.41 E-value=8.8e-06 Score=82.20 Aligned_cols=155 Identities=14% Similarity=0.109 Sum_probs=101.3
Q ss_pred CCccCCcceEEEC-CEEEEEEEEec--CCCeEEEEEEeCCCCc-ceecC-CCCCCCC--CcCCCceEeeeEEEccCCeEE
Q 008686 59 SWMNDPNGPMIYK-GIYHFFYQYKL--WDTVVWGHSTSTDMVN-WTPHD-AAIYPSQ--PFDANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 59 gw~nDPnG~~~~~-G~YHlfyq~~~--~g~~~Wgha~S~Dlvh-W~~~~-~aL~P~~--~~d~~gv~SGsav~~~dg~~~ 131 (557)
+-+..|. +++.+ |+|+|||.... .+....+.|+|+|+.. |++.. ..+.+.. ..+...+.+++++.++||+++
T Consensus 58 ~~~wap~-v~~~~~g~~~l~yt~~~~~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~~y 136 (286)
T cd08772 58 GGIWAPS-IVYIENGKFYLYYTDVSFTKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGKWY 136 (286)
T ss_pred CcEecce-EEEcCCCCEEEEEEeecCCCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCCEE
Confidence 3466885 66777 99999999872 3577899999999975 56442 1122321 223346788999887569999
Q ss_pred EEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec----CCcc
Q 008686 132 VLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI----NDTG 207 (557)
Q Consensus 132 l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~----~~~G 207 (557)
|+|.+........+.+|.|+|. .+|++....+++.... ....+.-|.++ + .+|+|||++.+.. ...-
T Consensus 137 ~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~~~~~y 207 (286)
T cd08772 137 LVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL-K-KNGKYYLFYSINGTGRVDSTY 207 (286)
T ss_pred EEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE-E-ECCEEEEEEEcCCCcCCCCCc
Confidence 9998765333456788988874 6787653222232221 23467889854 4 4789999997754 1233
Q ss_pred EEEEEEeCC-CCCCEEc
Q 008686 208 LAILYRSKD-FVNWTKA 223 (557)
Q Consensus 208 ~i~ly~S~D-l~~W~~~ 223 (557)
++.+++|++ +-.|+..
T Consensus 208 ~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 208 SIGYARSESDTGPYVPK 224 (286)
T ss_pred ceEEEEccCCCCCcccC
Confidence 567778865 3456544
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.5e-06 Score=84.85 Aligned_cols=121 Identities=16% Similarity=0.119 Sum_probs=73.2
Q ss_pred ccCCeEEEecCCCeEEEEEeeecC---------CccEEEEEEeCCCCCCEEcccccccCC--------------CCCcee
Q 008686 181 FRDPTTAWIGPDKIWRVIIGSKIN---------DTGLAILYRSKDFVNWTKAEQSLYSTN--------------QSGMWE 237 (557)
Q Consensus 181 fRDP~V~~~~~~g~~~m~~ga~~~---------~~G~i~ly~S~Dl~~W~~~~~~~~~~~--------------~~~~~E 237 (557)
+|||+|+.. .+|.|||+..+... ..+.|.+|+|+||.+|+..+..+.... .....+
T Consensus 2 ~rDP~v~~~-~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVTLG-PDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEEec-CCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 799996544 57788888765431 134689999999999999875442211 123556
Q ss_pred ecceEEecCCCCCCeeecccCCceeEEEEEeecCC--ceeEEEEEEEecCCCeEeecCCccCCCCccccccCCCccceee
Q 008686 238 CPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNY--QQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTF 315 (557)
Q Consensus 238 CPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~--~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~fYA~qt~ 315 (557)
+|+++.++ | +|+|.++.... ......+..-+...+.|+..... ..+ ..-.-+..|
T Consensus 81 AP~v~~~~--g-------------~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~------~~~--~~~iD~~~f 137 (269)
T cd08986 81 APELHYIK--G-------------RWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN------KPL--FPGIDPSLF 137 (269)
T ss_pred CceEEEEC--C-------------EEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC------CCC--CCccCCceE
Confidence 99999997 6 88888886431 12223333333334566532110 001 113446788
Q ss_pred eeCCCCcEEEE
Q 008686 316 FDSAKNRRILW 326 (557)
Q Consensus 316 ~d~~~gr~i~~ 326 (557)
.|. +|+..|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 875 6877775
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.6e-06 Score=86.98 Aligned_cols=89 Identities=20% Similarity=0.323 Sum_probs=63.8
Q ss_pred CCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-----CCccEEEEEEeCCCCCCEEcccccccCC-CCCceeec
Q 008686 166 ENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-----NDTGLAILYRSKDFVNWTKAEQSLYSTN-QSGMWECP 239 (557)
Q Consensus 166 ~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-----~~~G~i~ly~S~Dl~~W~~~~~~~~~~~-~~~~~ECP 239 (557)
++||+.+..+ ...+|||+|++..++|+|||+..... .....|.+++|+||.+|+..+..+.... .+.+| ||
T Consensus 5 ~~pvl~~~~g--~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-AP 81 (276)
T cd08983 5 GNPVLTSTAG--TKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-AP 81 (276)
T ss_pred CceEEeCCcC--CCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-Cc
Confidence 5899986433 57899999876546789999876542 1223689999999999998875432222 34466 99
Q ss_pred ceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 240 DFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 240 dlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
++|..+..| +|+|.+|..
T Consensus 82 ev~~d~~~g-------------~y~~~~s~~ 99 (276)
T cd08983 82 EAFWDAERG-------------QYVVYWSSR 99 (276)
T ss_pred cceEcCCCC-------------eEEEEEecc
Confidence 999986434 888888864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.6e-05 Score=78.89 Aligned_cols=152 Identities=15% Similarity=0.110 Sum_probs=93.7
Q ss_pred CCCccCCcceEEECCEEEEEEEEec-C-CCeEEEEEEeCCC--CcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEE
Q 008686 58 SSWMNDPNGPMIYKGIYHFFYQYKL-W-DTVVWGHSTSTDM--VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVL 133 (557)
Q Consensus 58 ~gw~nDPnG~~~~~G~YHlfyq~~~-~-g~~~Wgha~S~Dl--vhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~ 133 (557)
.+-+..|. +++.+|+|||||..+. . .....++|+|+|+ -.|+..++++.+........+..++++.++||++||+
T Consensus 55 ~~~~wAP~-v~~~~g~yyl~ys~~~~~~~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Yl~ 133 (288)
T cd08998 55 SGNLWAPD-VIYLNGKYYLYYSVSTFGSNRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLWLS 133 (288)
T ss_pred CCCccCCe-EEEECCEEEEEEEEEeCCCCceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEEEE
Confidence 34466784 7788999999999882 2 3667899999999 7999887666554322334567889988778999999
Q ss_pred EeeecCCCcceEEEEE-EcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-C---Ccc-
Q 008686 134 YTGIDAGNKQVQNLAV-PKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-N---DTG- 207 (557)
Q Consensus 134 YTg~~~~~~~~q~lA~-s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~---~~G- 207 (557)
|.+.. ..+.++. +.|.+.+ ..+... ...++..+. .......|++ ++ .+|.|||++.+.. . ..+
T Consensus 134 ~~~~~----~~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~--~~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~~~y 202 (288)
T cd08998 134 FGSFW----GGIFLVELDPKTGKP--LYPGGY-GYNIAGRPR--GHGAIEAPYI-IY-RGGYYYLFVSYGGCCAGEDSTY 202 (288)
T ss_pred eeecc----CCEEEEEeCcccCCc--cCCCCc-ceEEeccCC--CCCceeeeEE-EE-eCCEEEEEEEcchhcCCCCCce
Confidence 97542 1123332 2332211 122110 111222221 1234578985 45 5899999986532 1 122
Q ss_pred EEEEEEeCCCC-CCE
Q 008686 208 LAILYRSKDFV-NWT 221 (557)
Q Consensus 208 ~i~ly~S~Dl~-~W~ 221 (557)
++.+++|+++. -|+
T Consensus 203 ~v~~~~s~~~~GP~~ 217 (288)
T cd08998 203 NIRVGRSKSITGPYV 217 (288)
T ss_pred EEEEEEcCCCCCCcC
Confidence 67899998864 355
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.4e-05 Score=82.29 Aligned_cols=129 Identities=15% Similarity=0.113 Sum_probs=88.6
Q ss_pred CCcceEEEC-CEEEEEEEEec----CCCeEEEEEEeC-CCCcceecCCC-CCCCCCcCCCceEeeeEEEccCCeEEEEEe
Q 008686 63 DPNGPMIYK-GIYHFFYQYKL----WDTVVWGHSTST-DMVNWTPHDAA-IYPSQPFDANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 63 DPnG~~~~~-G~YHlfyq~~~----~g~~~Wgha~S~-DlvhW~~~~~a-L~P~~~~d~~gv~SGsav~~~dg~~~l~YT 135 (557)
.++ ++..+ |+|+|||..+. .+....++|+|+ |+++|++.+.. +.+....+..+.-++.++.. +|+++|+|+
T Consensus 65 sGs-av~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~~~~~~~~~~~~RDP~V~~~-~g~~~m~~g 142 (298)
T cd08996 65 SGS-AVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPVIPPPDGYTTHFRDPKVFWH-DGKWYMVLG 142 (298)
T ss_pred eCe-EEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCceEcCCCCCCCcccCCeEEeE-CCEEEEEEE
Confidence 443 33456 99999999872 346788999999 89999987532 22112233455678888875 799999999
Q ss_pred eecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCC--CeEEEEEeeec
Q 008686 136 GIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPD--KIWRVIIGSKI 203 (557)
Q Consensus 136 g~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~--g~~~m~~ga~~ 203 (557)
+...+....+.++.|+| |++|+.. .++...... ....+.-|.+ ++ .+ ++|+|+++.+.
T Consensus 143 ~~~~~~~~~i~ly~S~D-----l~~W~~~--~~~~~~~~~-~~~~~EcP~l-~~-l~~~~k~vL~~s~~~ 202 (298)
T cd08996 143 AGTEDGTGRILLYRSDD-----LKNWEYL--GELLTSLGD-FGYMWECPDL-FP-LDVEGKWVLIFSPQG 202 (298)
T ss_pred EEecCCCcEEEEEECCC-----CCCCEEc--ceecccCCC-ccceEeCCcE-EE-ECCCCeEEEEECCCC
Confidence 87654456678888887 4799974 344322111 2346789985 44 46 89999998764
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.16 E-value=3e-05 Score=79.85 Aligned_cols=124 Identities=10% Similarity=0.088 Sum_probs=76.0
Q ss_pred CCccCCeEEEecCCCeEEEEEeeecCC----ccEEEEEEeCCCCCCEEcccccccCC---CCCceeecceEEecCCCCCC
Q 008686 179 GSFRDPTTAWIGPDKIWRVIIGSKIND----TGLAILYRSKDFVNWTKAEQSLYSTN---QSGMWECPDFFPVSTKSPKG 251 (557)
Q Consensus 179 ~~fRDP~V~~~~~~g~~~m~~ga~~~~----~G~i~ly~S~Dl~~W~~~~~~~~~~~---~~~~~ECPdlf~l~~~g~~~ 251 (557)
..+|||+|++.+++|.|||+..+.... ...+.+|+|+||.+|+..+..+.... ......+|+++..+ |
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~--G--- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK--G--- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC--C---
Confidence 468999987765689999997664321 12479999999999999875443221 12357899999887 6
Q ss_pred eeecccCCceeEEEEEeecCCc----eeEEEEEEEecCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEE
Q 008686 252 VDTSVIGPNIKHVLKVSLSNYQ----QDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILW 326 (557)
Q Consensus 252 ~~~~~~~~~~~~vl~~s~~~~~----~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~ 326 (557)
+|+|.++..... ...+++.+ ...++|+..... .....+. ..-|..|.|. +|+..|+
T Consensus 79 ----------~yyly~s~~~~~~~~~~~~va~s~--~p~GP~~~~~~~------~~~~~~~~~iDp~~f~Dd-DG~~Yl~ 139 (291)
T cd08981 79 ----------RYYMFATFHNPGGERRGTAILVSD--SPEGPFVPHSDG------PVTPEDWMCLDGTLYVDE-DGKPWMV 139 (291)
T ss_pred ----------EEEEEEEeccCCCceeeEEEEECC--CCCCCCEeCCCC------ccCCCCCceEcCceEEcC-CCCEEEE
Confidence 888888764322 22333332 233455422100 0111122 4556678875 6888775
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00029 Score=71.63 Aligned_cols=141 Identities=10% Similarity=0.087 Sum_probs=87.9
Q ss_pred ccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCC-ccee-cC-CCCCCCCCcCCCceEeeeEEEccCCeEEEEEeee
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMV-NWTP-HD-AAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGI 137 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~Dlv-hW~~-~~-~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~ 137 (557)
+.-|. +++++|+|+|||..+ ...++|+|+|.. .|+. .+ +.+.+.. ......+++++.++||+++|+|.+.
T Consensus 66 ~wAP~-v~~~~g~yy~yys~~----~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~~~~~ 138 (275)
T cd09004 66 AWAPS-VIERNGKYYFYFSAN----GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLYWGGW 138 (275)
T ss_pred cCCCe-EEEECCEEEEEEEcC----CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEEEcCc
Confidence 45684 788999999999953 578999999975 7887 33 3333321 1234567888887789999999753
Q ss_pred cCCCcceEEE-EEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-C-CccEEEEEEe
Q 008686 138 DAGNKQVQNL-AVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-N-DTGLAILYRS 214 (557)
Q Consensus 138 ~~~~~~~q~l-A~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~-~~G~i~ly~S 214 (557)
. . ..+ ..+.|. .+|+.. ..++.... ...+.-|.+ ++ .+|+|||++.+.. . ..-++.+++|
T Consensus 139 ~----~-~~i~~l~~d~-----~~~~~~--~~~~~~~~---~~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~~ya~s 201 (275)
T cd09004 139 G----H-CNVAKLNEDM-----ISFDGE--RDGSEITP---KNYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHVAYAMA 201 (275)
T ss_pred C----C-EEEEEECCCc-----ccccCc--ceeeeccC---CCceecceE-EE-ECCEEEEEEECCCCCCCCceEEEEEc
Confidence 1 1 222 334442 456532 11221111 124578884 55 5889999987753 2 2226778888
Q ss_pred CCCC-CCEEccc
Q 008686 215 KDFV-NWTKAEQ 225 (557)
Q Consensus 215 ~Dl~-~W~~~~~ 225 (557)
+++. -|+..+.
T Consensus 202 ~~~~GP~~~~~~ 213 (275)
T cd09004 202 DSPLGPFERPGN 213 (275)
T ss_pred CCCCCCcccCCc
Confidence 8764 4876553
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.0001 Score=75.03 Aligned_cols=148 Identities=16% Similarity=0.126 Sum_probs=92.9
Q ss_pred CcceEEECCEEEEEEEEe-cCCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCC-
Q 008686 64 PNGPMIYKGIYHFFYQYK-LWDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAG- 140 (557)
Q Consensus 64 PnG~~~~~G~YHlfyq~~-~~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~- 140 (557)
| -+++.+|+|||||... .-.....+.|+|++.. .|+..+..+.+ ...+..+++++++||+.||+|.+....
T Consensus 70 P-~i~~~~g~yy~y~~~~~~~~~~~~~va~a~~~~Gp~~~~~~~~~~-----~~~~iD~~vf~d~dG~~Yl~~~~~~~~~ 143 (286)
T PF04616_consen 70 P-EIHYINGKYYMYYSDSGGDAGSGIGVATADSPDGPWTDPGKIPIP-----GGNSIDPSVFVDDDGKYYLYYGSWDNGD 143 (286)
T ss_dssp E-EEEEETTEEEEEEEEESTSTTEEEEEEEESSTTS-EEEEEEEEEE-----SSSSSSEEEEEETTSEEEEEEEESTTTS
T ss_pred C-eEEEcCCeEEEEEEccCCCCCcceeEEEeCCcccccccccceeec-----cccccCceEEEecCCCcEEeCcccCCCc
Confidence 5 3678899999999943 3345679999999986 99987654333 234677899987679999999986542
Q ss_pred CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCccEEEEEEeCCCCC
Q 008686 141 NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDTGLAILYRSKDFVN 219 (557)
Q Consensus 141 ~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~G~i~ly~S~Dl~~ 219 (557)
..+.+.++...+.. .++.......+.............-|++ ++ .+|+|||++.+.. ...=++.+++|+++..
T Consensus 144 ~~~~i~~~~l~~d~----~~~~~~~~~~~~~~~~~~~~~~~Egp~~-~k-~~g~yYl~~s~~~~~~~y~v~~~~s~~~~g 217 (286)
T PF04616_consen 144 PGGGIYIAELDPDG----TSLTGEPVVVIFPGDEGWDGGVVEGPFV-FK-HGGKYYLFYSAGGTGSPYQVGYARSDSPLG 217 (286)
T ss_dssp SEEEEEEEEEETTT----SSEEEEECEEEEEESGSSTTTBEEEEEE-EE-ETTEEEEEEEESGSSTTTEEEEEEESSTTS
T ss_pred cceeEEeecccCcc----ccccCcccccccccccccCCccccceEE-EE-cCCCEEEEEeccCCCCCceEEEeeccCCCC
Confidence 23444555443321 3333321122223221222344567885 45 5899999998654 2224678899999875
Q ss_pred -CEEc
Q 008686 220 -WTKA 223 (557)
Q Consensus 220 -W~~~ 223 (557)
|+..
T Consensus 218 p~~~~ 222 (286)
T PF04616_consen 218 PWEWK 222 (286)
T ss_dssp GGEET
T ss_pred ceeec
Confidence 4443
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.04 E-value=7.4e-05 Score=76.45 Aligned_cols=78 Identities=22% Similarity=0.418 Sum_probs=56.5
Q ss_pred CCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEec
Q 008686 166 ENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 166 ~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~ 245 (557)
.||||. ..+.||.|++. ++.|||+.++.. ..+.+.+|+|+||.+|+..+..+. ...+.+| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~~~--~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~-~~~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSILRD--GEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALP-EYEGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEEEE--CCEEEEEEcchh-cCCCEEEEECCCcCCceEcccccc-CCCCCEE-cCeeEEEC
Confidence 478874 24579997643 689999765422 233589999999999999875332 3345678 89999987
Q ss_pred CCCCCCeeecccCCceeEEEEEeec
Q 008686 246 TKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 246 ~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
| |++|.++..
T Consensus 75 --g-------------kyy~yys~~ 84 (280)
T cd09002 75 --G-------------RYYIYFPAI 84 (280)
T ss_pred --C-------------EEEEEEEee
Confidence 6 888888864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00016 Score=78.43 Aligned_cols=166 Identities=19% Similarity=0.296 Sum_probs=98.0
Q ss_pred cCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCc-------CCCceEeeeEEEccCCeEEEEE
Q 008686 62 NDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPF-------DANSCWSGSVTILPGGNPAVLY 134 (557)
Q Consensus 62 nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~-------d~~gv~SGsav~~~dg~~~l~Y 134 (557)
-||- +|..+.-|+|=-....|-+- -.-+.|+||+||+...-.|.+...+ +..|||.+++. ..||+++|+|
T Consensus 31 PDpS-i~rvg~dyYia~stF~~fpG-l~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~y 107 (549)
T COG3507 31 PDPS-IVRVGDDYYIATSTFEWFPG-LAIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYY 107 (549)
T ss_pred CCCc-eEecCCceEEEcceEEEcCc-eeeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEE
Confidence 5884 66666677774442233222 6678899999999987766665422 35689999987 5699999999
Q ss_pred eeecCCC---cceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCC------
Q 008686 135 TGIDAGN---KQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND------ 205 (557)
Q Consensus 135 Tg~~~~~---~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~------ 205 (557)
|...... ....+..++.+..+ ..|.. |+.-+.. .--||.++ ++++|+-||+.++....
T Consensus 108 tdvk~~~g~~k~~~nyl~t~~s~~---G~WsD----pi~l~~~-----~~iDPslf-~D~dGr~wlv~~~w~~~~~~~~~ 174 (549)
T COG3507 108 TDVKRSGGPYKNAGNYLVTAESID---GPWSD----PIKLNGS-----NAIDPSLF-FDKDGRKWLVNGSWDGGIFMHSF 174 (549)
T ss_pred ecccccCCcccccccEEEEecCCC---CCccc----ceecCCc-----CccCCcee-ecCCCCEEEEecccCCCcccccc
Confidence 8775532 22222333322211 35664 3432211 23599954 55889999999876522
Q ss_pred ccEEEEEEeC---CCCCCEEcccccccCCCCCceeecceEEec
Q 008686 206 TGLAILYRSK---DFVNWTKAEQSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 206 ~G~i~ly~S~---Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~ 245 (557)
.+.++-..++ .|..+.+ + .++........|-|-+++.+
T Consensus 175 ~~i~l~~~~~~~~~l~g~~~-~-~~~~G~~~~~~EGPhl~k~~ 215 (549)
T COG3507 175 AGIILQEYDKTTQKLVGQGY-K-IIFDGGNGGLTEGPHLYKKT 215 (549)
T ss_pred cceeeeeccccccccCCccc-e-eEeccCCCccccCceeeccC
Confidence 1333222221 2333322 1 23333345578999888877
|
|
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00013 Score=76.42 Aligned_cols=144 Identities=19% Similarity=0.198 Sum_probs=93.4
Q ss_pred ECCEEEEEEEEe-c---C---CCeEEEEEEeCCCC----cceecCCCCCCCCC-cC-------------CCceEeeeEEE
Q 008686 70 YKGIYHFFYQYK-L---W---DTVVWGHSTSTDMV----NWTPHDAAIYPSQP-FD-------------ANSCWSGSVTI 124 (557)
Q Consensus 70 ~~G~YHlfyq~~-~---~---g~~~Wgha~S~Dlv----hW~~~~~aL~P~~~-~d-------------~~gv~SGsav~ 124 (557)
.+|+|||||..+ . . -....++++++|+. .|+.+.+.+.++.. |+ ....-.+.++.
T Consensus 80 ~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~ 159 (349)
T cd08997 80 DDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFE 159 (349)
T ss_pred CCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEe
Confidence 469999999997 1 1 14679999999984 45444445556543 21 22345677777
Q ss_pred cc-CCeEEEEEeeecCCC---------------------------cceEEEEEEcCCCCCccceeecCCCCceEecCCCC
Q 008686 125 LP-GGNPAVLYTGIDAGN---------------------------KQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQI 176 (557)
Q Consensus 125 ~~-dg~~~l~YTg~~~~~---------------------------~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~ 176 (557)
++ +|++||+++++.... .-.++||++++. .+.+|+-+ .|++.+...
T Consensus 160 d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~~v- 233 (349)
T cd08997 160 DPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLLEANGV- 233 (349)
T ss_pred cCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--CccccCCCc-
Confidence 64 588999999876421 134567776643 25789874 588764321
Q ss_pred CCCCccCCeEEEecCCCeEEEEEeeecC-------CccEEEEEEeCCCC-CCEE
Q 008686 177 DPGSFRDPTTAWIGPDKIWRVIIGSKIN-------DTGLAILYRSKDFV-NWTK 222 (557)
Q Consensus 177 ~~~~fRDP~V~~~~~~g~~~m~~ga~~~-------~~G~i~ly~S~Dl~-~W~~ 222 (557)
..++.+|.+ ++ .+|+|||+..++.. +...+..|.|++|. .|+.
T Consensus 234 -~d~~E~P~v-~~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 234 -NDELERPHV-VF-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred -CCceEcceE-EE-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 346889995 45 58999999875542 12246677888874 4554
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00083 Score=68.17 Aligned_cols=144 Identities=12% Similarity=0.113 Sum_probs=90.2
Q ss_pred ccCCcceEEE--CCEEEEEEEEe--cCCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEe
Q 008686 61 MNDPNGPMIY--KGIYHFFYQYK--LWDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 61 ~nDPnG~~~~--~G~YHlfyq~~--~~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YT 135 (557)
+.-|. ++|+ +|+|||||... ..+....++|+|++.. .|+.++..+ |.. .+..++++++++||+.||+|.
T Consensus 65 ~waP~-v~y~~~~g~Y~m~~~~~~~~~~~~~igvA~Sd~p~Gpf~~~~~~~-~~~----~~~~Dp~vf~DdDG~~Yl~~~ 138 (265)
T cd08985 65 IERPK-VIYNAKTGKYVMWMHIDSSDYSDARVGVATSDTPTGPYTYLGSFR-PLG----YQSRDFGLFVDDDGTAYLLYS 138 (265)
T ss_pred EECCe-EEEeCCCCEEEEEEEeCCCCCcceeEEEEEeCCCCCCCEECCccC-CCC----CCccCCceEEcCCCCEEEEEe
Confidence 45563 5664 59999999987 3456789999999876 788765433 221 335678898888899999998
Q ss_pred eecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC-CccEEEEEEe
Q 008686 136 GIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN-DTGLAILYRS 214 (557)
Q Consensus 136 g~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~-~~G~i~ly~S 214 (557)
+.. .....++.-++. +..+. ..+.... ......-|. +++ .+|.|||+...... ....+..++|
T Consensus 139 ~~~---~~~i~i~~L~~d----~~~~~---~~~~~~~----~~~~~EaP~-i~K-~~g~YYL~~S~~t~~~~~~~~y~~s 202 (265)
T cd08985 139 DRD---NSDLYIYRLTDD----YLSVT---GEVTTVF----VGAGREAPA-IFK-RNGKYYLLTSGLTGWNPNDARYATA 202 (265)
T ss_pred cCC---CCceEEEEeCCC----ccccc---ceEEEcc----CCCccccce-EEE-ECCEEEEEEccCCCccCCceEEEEe
Confidence 653 123344433221 23332 2233211 123567898 466 58999999876431 1234678888
Q ss_pred CCCC-CCEEcccc
Q 008686 215 KDFV-NWTKAEQS 226 (557)
Q Consensus 215 ~Dl~-~W~~~~~~ 226 (557)
+++. -|+..+.+
T Consensus 203 ~s~~GP~~~~~~~ 215 (265)
T cd08985 203 TSILGPWTDLGNP 215 (265)
T ss_pred cCCCCCccccCcC
Confidence 8764 57776543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00012 Score=73.88 Aligned_cols=114 Identities=20% Similarity=0.285 Sum_probs=86.2
Q ss_pred CCCCCC--CcCCC----ceEeeeEEEccCCeEEEEEeee-----cCCCcceEEEEEEcCCCCCccce-eecCCCCceEec
Q 008686 105 AIYPSQ--PFDAN----SCWSGSVTILPGGNPAVLYTGI-----DAGNKQVQNLAVPKNLSDPYLKE-WIKPPENPLMVP 172 (557)
Q Consensus 105 aL~P~~--~~d~~----gv~SGsav~~~dg~~~l~YTg~-----~~~~~~~q~lA~s~d~~d~~l~~-w~k~~~~Pvi~~ 172 (557)
.+.|.. .+++. .+|.++++.. +++++|+|-.. .........+|.|+|+ .+ |++.+ +|++.|
T Consensus 13 Ii~~~~~~~~~~~~~~~~vFNpav~~~-~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e~-ep~~~P 85 (314)
T COG2152 13 IITRSDYIPPHARFIVVSVFNPAVVLV-GGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIEP-EPTLWP 85 (314)
T ss_pred ceeeccccCCCCceeEEEEecceeEEE-CCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecCC-cceEec
Confidence 455554 34555 7999999886 89999998872 2235677889999987 34 88864 799976
Q ss_pred -CCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEccccc
Q 008686 173 -ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSL 227 (557)
Q Consensus 173 -p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~ 227 (557)
...++.....||-|+. .+++|+|.+.+..+...+..++.++|+.+|++.+.++
T Consensus 86 ~~~~~e~~G~EDPRvt~--I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~ 139 (314)
T COG2152 86 ANYPYEIYGIEDPRVTK--IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIF 139 (314)
T ss_pred CCCchhhhcccCceEEE--ECCEEEEEEEecCCCCcccchhhhhhhhhhhhccccc
Confidence 3345677889999654 4799999999986555578899999999999987533
|
|
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.90 E-value=6e-05 Score=76.63 Aligned_cols=78 Identities=21% Similarity=0.267 Sum_probs=55.4
Q ss_pred CceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccccccC---------CCCCcee
Q 008686 167 NPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYST---------NQSGMWE 237 (557)
Q Consensus 167 ~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~---------~~~~~~E 237 (557)
||||. ..+.||.|+. .++.|||+.++..... .+.+|+|+||.+|+..+..+... ..+.+|
T Consensus 1 NPvi~-------~~~~DP~ii~--~~~~yY~~~t~~~~~~-g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSIIR--AGDDYYMASSTFEWFP-GVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEEE--ECCeEEEEECccccCC-CcEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 57763 3567999764 3689999976543223 37899999999999987544321 123466
Q ss_pred ecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 238 CPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 238 CPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
+|+++.++ | ||+|.++..
T Consensus 70 AP~v~~~~--G-------------~yy~yy~~~ 87 (269)
T cd08989 70 APCLSYYD--G-------------KFWLIYTAV 87 (269)
T ss_pred cceEEEEC--C-------------EEEEEEecc
Confidence 99999987 6 888888764
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00011 Score=80.21 Aligned_cols=129 Identities=12% Similarity=0.070 Sum_probs=82.1
Q ss_pred CCcceEEECCEEEEEEEEe-c---CC-CeEEEEEEeCCCCcceecC-CCCCCCCCcCCCceEeeeEEEccCCeEEEEEee
Q 008686 63 DPNGPMIYKGIYHFFYQYK-L---WD-TVVWGHSTSTDMVNWTPHD-AAIYPSQPFDANSCWSGSVTILPGGNPAVLYTG 136 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~-~---~g-~~~Wgha~S~DlvhW~~~~-~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg 136 (557)
.++ ++..+|++||||..+ . +. ...-++|+|+|+.+|++.+ ++|.+.......+.-++.|+. .+|+++|++.+
T Consensus 88 sGs-av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~~~fRDP~V~~-~~g~~~M~~g~ 165 (445)
T TIGR01322 88 SGS-AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYTAHFRDPKVWK-HNGHWYMVIGA 165 (445)
T ss_pred ECe-EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCcCcCCCCcEEe-ECCEEEEEEEE
Confidence 443 345799999999986 1 22 2334689999999999876 456543221122345677765 48999999987
Q ss_pred ecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCC---CCCCCCccCCeEEEecCCCeEEEEEeee
Q 008686 137 IDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPAD---QIDPGSFRDPTTAWIGPDKIWRVIIGSK 202 (557)
Q Consensus 137 ~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~---~~~~~~fRDP~V~~~~~~g~~~m~~ga~ 202 (557)
..........+..|+| |++|+.. +++..+.. +..-..|.-|-+ +. -+++|+|+++.+
T Consensus 166 ~~~~~~g~i~ly~S~D-----l~~W~~~--g~~~~~~~~~~~~~g~~~ECPdl-f~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 166 QTETEKGSILLYRSKD-----LKNWTFV--GEILGDGQNGLDDRGYMWECPDL-FS-LDGQDVLLFSPQ 225 (445)
T ss_pred ecCCCceEEEEEECCC-----cccCeEe--cccccccccccCCccceEECCeE-EE-ECCcEEEEEecc
Confidence 6543333446666766 5899974 45553321 111235778874 44 478999998754
|
|
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0015 Score=66.83 Aligned_cols=149 Identities=11% Similarity=0.199 Sum_probs=85.8
Q ss_pred CccCCcceEEECCEEEEEEEEecCC--CeEEEEEEeCCCC-c-----ceecCCCCCCCCCcCCCceEeeeEEEccCCeEE
Q 008686 60 WMNDPNGPMIYKGIYHFFYQYKLWD--TVVWGHSTSTDMV-N-----WTPHDAAIYPSQPFDANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 60 w~nDPnG~~~~~G~YHlfyq~~~~g--~~~Wgha~S~Dlv-h-----W~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~ 131 (557)
-+.-|. +.+++|+|||||.....+ ...++.|+|++.. . |+..++.+.+... .......+++++++||++|
T Consensus 56 ~~WAP~-v~~~~G~yylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~~Y 133 (279)
T cd08988 56 HLWAPD-IYQHNGKFYLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQPW 133 (279)
T ss_pred CEecce-EEEECCEEEEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCCEE
Confidence 356674 788999999999877333 4688999999964 3 4433333333322 2234578899988789999
Q ss_pred EEEeeecCCCcceEEEEEEcCCCCCccceeec-CCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-----CC
Q 008686 132 VLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIK-PPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-----ND 205 (557)
Q Consensus 132 l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k-~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-----~~ 205 (557)
|+|.... .+ ....-++.|.. .... .....++..+. +.....=|+ +++ .+|.|||++.+.. +.
T Consensus 134 l~~g~~~-~g--i~~~eL~~d~~-----~~~~~~~~~~i~~~~~--~~~~~Egp~-i~k-~~g~YYl~~S~g~~~~~~~~ 201 (279)
T cd08988 134 LSFGSFW-GG--IKLFELDKDTM-----KPAEPGELHSIAGRER--SSAAIEAPF-ILY-RGDYYYLFVSFGLCCRGGDS 201 (279)
T ss_pred EEecccC-CC--EEEEEECcccC-----CccCCCcceEEeccCC--CCCceEeeE-EEE-cCCeEEEEEEcCcccCCCCC
Confidence 9996432 11 11222333321 1100 00112222211 123456788 456 5899999876532 12
Q ss_pred ccEEEEEEeCCCC-CCEE
Q 008686 206 TGLAILYRSKDFV-NWTK 222 (557)
Q Consensus 206 ~G~i~ly~S~Dl~-~W~~ 222 (557)
.-++.+++|+++. -|+.
T Consensus 202 ~y~v~~arS~~~~GPy~~ 219 (279)
T cd08988 202 TYKIAVGRSKNITGPYLD 219 (279)
T ss_pred CeEEEEEEeCCCCCCCCC
Confidence 2368899999874 3443
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00027 Score=76.94 Aligned_cols=127 Identities=13% Similarity=0.134 Sum_probs=81.5
Q ss_pred eEEECCEEEEEEEEe--c-----CCCe-EEEEEEeCCCCcceec--CCCCCCCCCcCCCceEeeeEEEccCCeEEEEEee
Q 008686 67 PMIYKGIYHFFYQYK--L-----WDTV-VWGHSTSTDMVNWTPH--DAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTG 136 (557)
Q Consensus 67 ~~~~~G~YHlfyq~~--~-----~g~~-~Wgha~S~DlvhW~~~--~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg 136 (557)
++..+|+||+||..+ . .... .-.+|+|+|+++|++. .++|.+...+.....-++.++..++|+++|++.+
T Consensus 74 av~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~ 153 (437)
T smart00640 74 AVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGA 153 (437)
T ss_pred EEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEE
Confidence 445688899999876 1 1112 2367889999999997 3666554333333445677766434689999987
Q ss_pred ecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCC-----eEEEEEeee
Q 008686 137 IDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDK-----IWRVIIGSK 202 (557)
Q Consensus 137 ~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g-----~~~m~~ga~ 202 (557)
...+....+.++.|+| |++|+.. +++..++.+..-..|..|-. +. -++ +|+|+++.+
T Consensus 154 ~~~~~~G~i~ly~S~D-----l~~W~~~--~~~~~~~~~~~g~~wECPdl-f~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 154 SDEDKTGIALLYRSTD-----LKNWTLL--GELLHSGVGDTGGMWECPDL-FP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EecCCCeEEEEEECCC-----cccCeEC--CcccccCCCCccceEECCcE-EE-eCCCCCceeEEEEECcC
Confidence 6544455577888877 5899874 45554321211246788873 33 344 899998775
|
|
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0033 Score=65.38 Aligned_cols=150 Identities=14% Similarity=0.105 Sum_probs=88.2
Q ss_pred ccCCcceEEEC----CEEEEEEEEecCCCeEEEEEEeCCCC-cceec-CCCC-CCCCC-cC-CCceEeeeEEEccCCeEE
Q 008686 61 MNDPNGPMIYK----GIYHFFYQYKLWDTVVWGHSTSTDMV-NWTPH-DAAI-YPSQP-FD-ANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 61 ~nDPnG~~~~~----G~YHlfyq~~~~g~~~Wgha~S~Dlv-hW~~~-~~aL-~P~~~-~d-~~gv~SGsav~~~dg~~~ 131 (557)
+.-| -+++++ |+|+|||... ....+.|+|++.. .|+++ +..| .+... .+ .....++++++++||+.|
T Consensus 78 ~WAP-~v~~~~~~~~gkyylyy~~~---~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdDG~~Y 153 (311)
T cd09003 78 SWAP-SIAVKKINGKGKFYLYFANG---GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDDGQGY 153 (311)
T ss_pred cCCC-ceEEeccCCCCEEEEEEecC---CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCCCCEE
Confidence 3467 467888 9999999742 4568999999965 99975 3223 22111 11 122468898887789999
Q ss_pred EEEeeecC----CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec----
Q 008686 132 VLYTGIDA----GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI---- 203 (557)
Q Consensus 132 l~YTg~~~----~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~---- 203 (557)
|+|.+... ...+.+.+|.-++. +.+.. ..++....+ ..+.=|.+ ++ .+|.|||++++.-
T Consensus 154 l~~g~~~~~~~~~~~~~i~i~~l~~D----~~~~~---g~~~~i~~~----~~~Egp~~-~K-~~G~YYL~ys~~~~~~~ 220 (311)
T cd09003 154 LYFGGGVPGGRWANPNTARVIKLGDD----MISVD---GSAVTIDAP----YFFEASGL-HK-INGTYYYSYCTNFGGRD 220 (311)
T ss_pred EEECCccCCCccccCCCEEEEEeCCC----ceecc---CCceEccCC----CceEeeeE-EE-ECCEEEEEEeCCCCccC
Confidence 99975321 11123444433321 12222 223321111 24577884 55 6899999886541
Q ss_pred ---CCccEEEEEEeCCCC-CCEEccccc
Q 008686 204 ---NDTGLAILYRSKDFV-NWTKAEQSL 227 (557)
Q Consensus 204 ---~~~G~i~ly~S~Dl~-~W~~~~~~~ 227 (557)
....++.+++|++.. -|+..+.++
T Consensus 221 ~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 221 PGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred CCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 224467778887754 587755433
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0017 Score=66.00 Aligned_cols=134 Identities=12% Similarity=0.062 Sum_probs=82.4
Q ss_pred ccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecC
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDA 139 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (557)
+..| -+++.+|+|||||..+. .+.+.|+|++.. .|++.+... ...+++++.++||+.||+|.+.
T Consensus 76 ~WAP-~v~~~~gkyy~yys~~~---~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~~~-- 140 (269)
T cd09001 76 QWAP-SLRYHNGTFYVFFCTNT---GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYGGG-- 140 (269)
T ss_pred EECC-ceEEECCEEEEEEEecC---CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeCCC--
Confidence 4567 47889999999998752 235678887754 787665322 2467788887789999998643
Q ss_pred CCcceEEEE-EEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCC
Q 008686 140 GNKQVQNLA-VPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFV 218 (557)
Q Consensus 140 ~~~~~q~lA-~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~ 218 (557)
.+.++ ++.|. ..... +...++..+.. ......-|++ ++ .+|.|||++.+.......+.+++|+++.
T Consensus 141 ----~i~~~~l~~d~-----~~~~~-~~~~~~~~~~~-~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~~s~~~~ 207 (269)
T cd09001 141 ----TIRLVELSPDL-----TGVGG-KDQVIIDAGEE-IGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCLRSKSLT 207 (269)
T ss_pred ----cEEEEEECccc-----CCcCC-CceEEEeCCCc-cccccccCeE-EE-ECCEEEEEEecCCCCCceEEEEEeCCCC
Confidence 23343 33332 22211 12233443321 1235577884 55 5899999987653223356788998864
Q ss_pred C-CEE
Q 008686 219 N-WTK 222 (557)
Q Consensus 219 ~-W~~ 222 (557)
. |+.
T Consensus 208 GP~~~ 212 (269)
T cd09001 208 GPYES 212 (269)
T ss_pred CCcCC
Confidence 3 554
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0035 Score=64.23 Aligned_cols=153 Identities=12% Similarity=0.117 Sum_probs=84.6
Q ss_pred CccCCcceEEECCEEEEEEEEecC---CCeEEEEEEeCC----CCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEE
Q 008686 60 WMNDPNGPMIYKGIYHFFYQYKLW---DTVVWGHSTSTD----MVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 60 w~nDPnG~~~~~G~YHlfyq~~~~---g~~~Wgha~S~D----lvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l 132 (557)
-+.-| .+.+.+|+|||||..... .....+.++|++ +-.|++.+..+.+.. .....++++.+ +|++||
T Consensus 54 ~~WAP-~i~~~~g~yylyys~~~~~~~~~~~~~v~~a~~~~~~~Gpw~~~~~~~~~~~----~~~iDp~~~~d-dG~~Yl 127 (288)
T cd08980 54 NLWAP-ELHYIDGKWYIYFAAGDGGGNANHRMYVLENAGADPPTGPWTFKGRLADPTD----RWAIDGTVFEH-NGQLYF 127 (288)
T ss_pred cEECc-eEEEECCEEEEEEEccCCCCCcceeEEEEEeCCCCCCCCCceEeeEeccCCC----CeeeeeEEEEE-CCEEEE
Confidence 34556 367889999999987732 234556677664 568998765442222 23577888875 799999
Q ss_pred EEeeecCC--CcceEEEEEEcCCCCCccceeecCCCCceE-ecC-CCCCC---CCccCCeEEEecCCCeEEEEEeeecC-
Q 008686 133 LYTGIDAG--NKQVQNLAVPKNLSDPYLKEWIKPPENPLM-VPA-DQIDP---GSFRDPTTAWIGPDKIWRVIIGSKIN- 204 (557)
Q Consensus 133 ~YTg~~~~--~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi-~~p-~~~~~---~~fRDP~V~~~~~~g~~~m~~ga~~~- 204 (557)
+|.+.... ......++...+. .++. +.++. ..| ..++. .-..=|+++ + .+|.|||++++..-
T Consensus 128 ~~~~~~~~~~~~~~i~~~~l~~~-----~~~~---g~~~~i~~p~~~we~~~~~~~EgP~~~-k-~~G~yYl~yS~~~~~ 197 (288)
T cd08980 128 VWSGWEGRTNGNQNLYIAKMSNP-----WTLT---GPRVLISRPEYDWERQGPGVNEGPAAL-K-RNGKVFLTYSASGSW 197 (288)
T ss_pred EEEccCCCCCCCccEEEEECCCC-----CccC---CcceEecCCCCCceecCceeeECcEEE-E-ECCEEEEEEECCCCC
Confidence 99865421 1233344433332 2232 12322 222 22221 124567754 4 46999999986542
Q ss_pred Ccc-EEEEEEeC---C-C--CCCEEcccccc
Q 008686 205 DTG-LAILYRSK---D-F--VNWTKAEQSLY 228 (557)
Q Consensus 205 ~~G-~i~ly~S~---D-l--~~W~~~~~~~~ 228 (557)
... ++.+++|+ + + ..|+..+.++.
T Consensus 198 ~~~Y~v~~a~~~~~~~~~~~~~~~~~~~pil 228 (288)
T cd08980 198 TPDYCLGLLTADGGADLLDPASWTKSPTPVF 228 (288)
T ss_pred CCCCEEEEEEEcCCCCCCChhhCcCCCCCce
Confidence 111 45556654 2 2 23765544443
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.013 Score=57.53 Aligned_cols=185 Identities=17% Similarity=0.219 Sum_probs=105.0
Q ss_pred ccCCCCCc--cCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEE-ccCCeE
Q 008686 54 FQPPSSWM--NDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTI-LPGGNP 130 (557)
Q Consensus 54 ~~p~~gw~--nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~-~~dg~~ 130 (557)
..|+.||. .|| -+++++|+||+|...+.- ...|+...=.-+-+|.+..-| +...-+ .+.-.+.++. .+.+.+
T Consensus 16 ~~Pk~g~~slKD~-T~V~ynGk~~VyAtt~d~-~~~y~sm~f~~Ftdws~~~sA--~q~~m~-~~~vAP~vFYFaPk~~W 90 (271)
T PF03664_consen 16 AQPKSGWVSLKDF-TIVPYNGKHHVYATTADT-GGGYGSMNFGPFTDWSQMASA--SQNYMD-QSAVAPQVFYFAPKNIW 90 (271)
T ss_pred ccCCCCceeccCc-eEEeECCEEEEEEEeccC-CCccceEeeeccCCHHHhhcc--ccccCC-cccccceEEEecCCcEE
Confidence 45778984 699 588999999999997711 124655544556678776543 222111 1223344443 257888
Q ss_pred EEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEE
Q 008686 131 AVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAI 210 (557)
Q Consensus 131 ~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ 210 (557)
||.|--.. ..-...++.|.++| ..|.. ..|++...-.-.....-|..|+.+ +..-||+... ..|.
T Consensus 91 ~L~yQwg~----~~fsY~Ts~Dptnp--ngWSa--pq~lf~g~i~~~~~g~iD~~vI~D--~~n~yLFfa~---DnGk-- 155 (271)
T PF03664_consen 91 YLAYQWGP----AAFSYSTSSDPTNP--NGWSA--PQPLFSGSISGSGTGPIDQWVICD--DTNMYLFFAG---DNGK-- 155 (271)
T ss_pred EEEEecCC----CcceeecCCCCCCC--ccCCC--CcccccccccCCCCCceeeEEEec--CCceEEEEcC---CCCc--
Confidence 99886221 11123456777776 56886 356653211111245689987754 3344555443 2354
Q ss_pred EEEeCC-CCCC----EEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 211 LYRSKD-FVNW----TKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 211 ly~S~D-l~~W----~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
||||.- +-+. .-....+........+|.++++++. |. .++.|++-..+
T Consensus 156 iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~--G~-----------~~YLmiVEaiG 208 (271)
T PF03664_consen 156 IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVK--GQ-----------NQYLMIVEAIG 208 (271)
T ss_pred EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEc--CC-----------ceEEEEEEEec
Confidence 788843 2222 1011123333345689999999998 52 27888776544
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.012 Score=59.47 Aligned_cols=164 Identities=16% Similarity=0.170 Sum_probs=94.6
Q ss_pred CCCCCCcccccccCCC---CCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCC-CCcceecCCCCCCCCCcCC
Q 008686 43 ITSQPYRTGYHFQPPS---SWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTD-MVNWTPHDAAIYPSQPFDA 114 (557)
Q Consensus 43 ~~~~~~rp~yH~~p~~---gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~D-lvhW~~~~~aL~P~~~~d~ 114 (557)
+....|-+.-=+.... .=..||.-+.-.+|+.||||... .|......+.+|+| ..+|.... .|.+......
T Consensus 27 D~G~tWs~~~~v~~~~~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~ 105 (275)
T PF13088_consen 27 DGGKTWSEPRIVADGPKPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNF 105 (275)
T ss_dssp CCTTEEEEEEEEETSTBTTCEEEEEEEEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSC
T ss_pred CCCCeeCCCEEEeeccccCCcccCcEEEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccce
Confidence 3445565443333322 33568853333499999999665 34455555599999 89999764 2333322223
Q ss_pred CceEeeeEEEccCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCe
Q 008686 115 NSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKI 194 (557)
Q Consensus 115 ~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~ 194 (557)
.+...+.++...+|++++-+.... .......+.+|.|++ ++|+... ++.. ....--|.++.. .+|+
T Consensus 106 ~~~~~~~~i~~~~G~l~~~~~~~~-~~~~~~~~~~S~D~G----~tW~~~~--~~~~------~~~~~e~~~~~~-~dG~ 171 (275)
T PF13088_consen 106 SGPGRGPPIQLPDGRLIAPYYHES-GGSFSAFVYYSDDGG----KTWSSGS--PIPD------GQGECEPSIVEL-PDGR 171 (275)
T ss_dssp EECSEEEEEEECTTEEEEEEEEES-SCEEEEEEEEESSTT----SSEEEEE--ECEC------SEEEEEEEEEEE-TTSE
T ss_pred eccceeeeeEecCCCEEEEEeecc-ccCcceEEEEeCCCC----ceeeccc--cccc------cCCcceeEEEEC-CCCc
Confidence 344555555556888777533222 234666778899875 8998742 2210 112234554333 6788
Q ss_pred EEEEEeeecCCccEEEEEEeCC-CCCCEEc
Q 008686 195 WRVIIGSKINDTGLAILYRSKD-FVNWTKA 223 (557)
Q Consensus 195 ~~m~~ga~~~~~G~i~ly~S~D-l~~W~~~ 223 (557)
.+|++... ..+.+.+++|.| +.+|+..
T Consensus 172 l~~~~R~~--~~~~~~~~~S~D~G~TWs~~ 199 (275)
T PF13088_consen 172 LLAVFRTE--GNDDIYISRSTDGGRTWSPP 199 (275)
T ss_dssp EEEEEEEC--SSTEEEEEEESSTTSS-EEE
T ss_pred EEEEEEcc--CCCcEEEEEECCCCCcCCCc
Confidence 88877653 223778888877 6899863
|
... |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0089 Score=61.22 Aligned_cols=145 Identities=12% Similarity=-0.018 Sum_probs=86.2
Q ss_pred CCccCCcceEEECCEEEEEEEEec-CCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEee
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKL-WDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTG 136 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~-~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg 136 (557)
+-+.-| -+++.+|+|||||.... .+....+.++|+|.- .|++. . +.+. .+..++++.++||+.||+|..
T Consensus 66 ~~~WAP-~v~~~~g~yy~yy~~~~~~~~~~~~v~~s~~p~gpw~~~-~-~~~~------~~iDp~vf~d~dG~~Y~~~~~ 136 (288)
T cd09000 66 GGIWAP-TIRYHDGTFYLITTNVDGMKDGGNFIVTADDPAGPWSDP-V-WLDS------GGIDPSLFFDDDGKVYLVGNG 136 (288)
T ss_pred CceEcc-eEEEECCEEEEEEEecCCCCCCceEEEEeCCCCCCCcCC-E-ecCC------CccCCceeEcCCCCEEEEecc
Confidence 335568 47889999999999872 124456788999883 78742 1 2222 456788888778999998865
Q ss_pred ecCC----CcceEEEEEEcCCCCCccceeecCC-CCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCccEEE
Q 008686 137 IDAG----NKQVQNLAVPKNLSDPYLKEWIKPP-ENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDTGLAI 210 (557)
Q Consensus 137 ~~~~----~~~~q~lA~s~d~~d~~l~~w~k~~-~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~G~i~ 210 (557)
.... +...+.++..+. ..++-.. ..++..... .....-|.+ ++ .+|+|||++.... ...-.+.
T Consensus 137 ~~~~~~~~~~~~i~~~~l~~------~~~~~~~~~~~~~~~~~---~~~~Egp~v-~k-~~g~YYl~ys~~~~~~~~~v~ 205 (288)
T cd09000 137 WDERRGYNGHGGIWLQEIDL------ETGKLLGEPKVIWNGTG---GRWPEGPHL-YK-RDGWYYLLIAEGGTGYGHSVT 205 (288)
T ss_pred cCCccccCCCCcEEEEEEcc------ccCCCCCCcEEEEeCCC---CCCcccCeE-EE-ECCEEEEEEecCCCCCCeEEE
Confidence 4221 123344553322 1222111 112222111 124467884 55 5899999986543 2234688
Q ss_pred EEEeCCCC-CCEEc
Q 008686 211 LYRSKDFV-NWTKA 223 (557)
Q Consensus 211 ly~S~Dl~-~W~~~ 223 (557)
+++|+++. -|+..
T Consensus 206 ~~~s~~~~Gp~~~~ 219 (288)
T cd09000 206 VARSRSITGPYEPA 219 (288)
T ss_pred EEEeCCCCCCCccC
Confidence 99999876 67664
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.039 Score=57.92 Aligned_cols=164 Identities=16% Similarity=0.199 Sum_probs=98.1
Q ss_pred CCCCCCcccccccCCC---CCccCCcceEEEC-CEEEEEEEEec-----------CCCeEEEEEEeCCC-CcceecCCCC
Q 008686 43 ITSQPYRTGYHFQPPS---SWMNDPNGPMIYK-GIYHFFYQYKL-----------WDTVVWGHSTSTDM-VNWTPHDAAI 106 (557)
Q Consensus 43 ~~~~~~rp~yH~~p~~---gw~nDPnG~~~~~-G~YHlfyq~~~-----------~g~~~Wgha~S~Dl-vhW~~~~~aL 106 (557)
+....|.+.--+.... ..+.||. ++... |+.+|||.... +...+..+.+|+|. ..|... ..|
T Consensus 55 D~G~tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~p-~~l 132 (351)
T cd00260 55 DGGKTWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSSP-RDL 132 (351)
T ss_pred cCCCcccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecCC-ccC
Confidence 3446777654344332 3567895 56666 99999997761 12456778888887 899853 334
Q ss_pred CCCC---CcCCCceEeeeEEEccCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccC
Q 008686 107 YPSQ---PFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRD 183 (557)
Q Consensus 107 ~P~~---~~d~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRD 183 (557)
.+.. .+.....-.|+.+...+|++++.+.+....+.....+.+|+|.| ++|+... +. . + ......
T Consensus 133 ~~~~~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~-~-~----~~~~~e 200 (351)
T cd00260 133 TPSVKGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV-N-D----AGGCSE 200 (351)
T ss_pred CccccCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC-C-C----CCCCcC
Confidence 3332 22211111233455557888776555443344556777888875 7997632 11 1 1 123456
Q ss_pred CeEEEecCCCeEEEEEeeecCCccEEEEEEeCCC-CCCEEc
Q 008686 184 PTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDF-VNWTKA 223 (557)
Q Consensus 184 P~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl-~~W~~~ 223 (557)
|.++-. .+|+.+|+..... .+.+.++.|.|. ..|+..
T Consensus 201 ~~i~el-~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~ 238 (351)
T cd00260 201 CSVVEL-SDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEA 238 (351)
T ss_pred CEEEEe-cCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccC
Confidence 776543 5788888765542 466778888774 899864
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.23 Score=50.01 Aligned_cols=160 Identities=16% Similarity=0.104 Sum_probs=87.8
Q ss_pred CEEEEEEEEe-cCCCeEEEEEEe--CCC-CcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCCC---cce
Q 008686 72 GIYHFFYQYK-LWDTVVWGHSTS--TDM-VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGN---KQV 144 (557)
Q Consensus 72 G~YHlfyq~~-~~g~~~Wgha~S--~Dl-vhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~~---~~~ 144 (557)
|+...++... ..+.......+| +|. .+|.....+..+. -....+..++++...+|+++|||+...... ...
T Consensus 1 G~l~a~~~~~~~~~~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~~~~ 78 (275)
T PF13088_consen 1 GRLLAVWEGGSDEGAIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWSGSR 78 (275)
T ss_dssp SEEEEEEEESSCSCCEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESCCTCE
T ss_pred CeEEEEEECCcccCCCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCCCcee
Confidence 4455555555 455666666666 987 7899865444333 122456777777667999999995544321 122
Q ss_pred EEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCC-CCCCEEc
Q 008686 145 QNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKD-FVNWTKA 223 (557)
Q Consensus 145 q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~D-l~~W~~~ 223 (557)
....+|.|+| ++|++.. .|...+........+.+- +-. .+|++++..-........+.++.|+| .+.|+..
T Consensus 79 ~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~-i~~-~~G~l~~~~~~~~~~~~~~~~~~S~D~G~tW~~~ 150 (275)
T PF13088_consen 79 IYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPP-IQL-PDGRLIAPYYHESGGSFSAFVYYSDDGGKTWSSG 150 (275)
T ss_dssp EEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEE-EEE-CTTEEEEEEEEESSCEEEEEEEEESSTTSSEEEE
T ss_pred EEEEEECCCC----CCCCCcc--ccccccccceeccceeee-eEe-cCCCEEEEEeeccccCcceEEEEeCCCCceeecc
Confidence 2238899975 8999742 333221111122234433 223 47877766322222334556666655 6899876
Q ss_pred ccccccCCCCCceeecceEEec
Q 008686 224 EQSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 224 ~~~~~~~~~~~~~ECPdlf~l~ 245 (557)
.. .. .....-.|.++++.
T Consensus 151 ~~-~~---~~~~~~e~~~~~~~ 168 (275)
T PF13088_consen 151 SP-IP---DGQGECEPSIVELP 168 (275)
T ss_dssp EE-CE---CSEEEEEEEEEEET
T ss_pred cc-cc---ccCCcceeEEEECC
Confidence 43 22 11123346666666
|
... |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.024 Score=58.52 Aligned_cols=139 Identities=12% Similarity=0.108 Sum_probs=73.3
Q ss_pred CCCCCccCCcceEEE-CCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCC----CCCCCcCC----------CceEee
Q 008686 56 PPSSWMNDPNGPMIY-KGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAI----YPSQPFDA----------NSCWSG 120 (557)
Q Consensus 56 p~~gw~nDPnG~~~~-~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL----~P~~~~d~----------~gv~SG 120 (557)
....+.-||+ ++.+ ||+.+|+|-...++ .-+.---+.|+..=.-.+..| .|+..|+. .++.-|
T Consensus 86 ~~~~~~IDp~-vf~DdDGk~Yl~~g~~~~~-~i~~~eL~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EG 163 (295)
T cd08982 86 SFPPGLADPA-LFIDDDGRLYLYYGCSNNY-PLRGVEVDPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEG 163 (295)
T ss_pred ccCCCccCCc-eEECCCCCEEEEEecCCCC-CeEEEEECcccCCccCcceEEEeCCCCCcCeEecCcccccccCCccccc
Confidence 3345667995 5555 59999998532111 123333344443211111111 12223322 234556
Q ss_pred eEEEccCCeEEEEEeeecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEE
Q 008686 121 SVTILPGGNPAVLYTGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVII 199 (557)
Q Consensus 121 sav~~~dg~~~l~YTg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ 199 (557)
..+...+|++||+|++.... ..-.+.+|+|++. +..|++...+||+..+.+. ...--...+ +..++|+||+++
T Consensus 164 P~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p----~GP~~~~~~~pil~~~~~~-~~g~GH~s~-v~~~~G~~~~~y 237 (295)
T cd08982 164 AWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSP----LGPFTYQPHNPFSYKPGGF-ITGAGHGST-FQDKYGNYWHVG 237 (295)
T ss_pred cEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCC----CCCCCcCCCCccccCCCCe-EecCCcccE-EECCCCCEEEEE
Confidence 66666799999999865322 2234678888765 3457766567888543221 011112233 355678898876
Q ss_pred eee
Q 008686 200 GSK 202 (557)
Q Consensus 200 ga~ 202 (557)
=+.
T Consensus 238 h~~ 240 (295)
T cd08982 238 TMT 240 (295)
T ss_pred EEE
Confidence 433
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.054 Score=56.19 Aligned_cols=118 Identities=20% Similarity=0.217 Sum_probs=77.3
Q ss_pred cCCcceE-----EECCEEEEEEEEe-cCCCeEEEEEEe-CCCCcceecC---CCCCCCCCcCCCceEeeeEEEccCCeEE
Q 008686 62 NDPNGPM-----IYKGIYHFFYQYK-LWDTVVWGHSTS-TDMVNWTPHD---AAIYPSQPFDANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 62 nDPnG~~-----~~~G~YHlfyq~~-~~g~~~Wgha~S-~DlvhW~~~~---~aL~P~~~~d~~gv~SGsav~~~dg~~~ 131 (557)
.|.+|+. .+++++++||..+ ..+...-.+|+| +|.+||+..+ ++|......+..+.-++.++...+++++
T Consensus 64 ~d~~g~~SGs~~~~~~~~~~~YTg~~~~~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~~~~~~ 143 (308)
T PF00251_consen 64 YDADGCFSGSAVVDDDNLVLFYTGNNRDGKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWREDGRWY 143 (308)
T ss_dssp GGTTEEEEEEEEEETTCEEEEEEEEETTTEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEECTTEEE
T ss_pred CCcCccCcceEEEECCEEEEEEeccCCCCCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEecCCEEE
Confidence 3666632 2578999999998 323567788999 8899999953 4454222225567788998555679999
Q ss_pred EEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEE
Q 008686 132 VLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAW 188 (557)
Q Consensus 132 l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~ 188 (557)
|+..+... ......+..|+| |++|+.. +++...... ....+.-|-++.
T Consensus 144 m~~g~~~~-~~g~i~~y~S~D-----l~~W~~~--~~l~~~~~~-~g~~~ECPdlf~ 191 (308)
T PF00251_consen 144 MLLGAGRD-GRGCILLYTSDD-----LIHWEYL--GPLFIPGDN-GGGMWECPDLFP 191 (308)
T ss_dssp EEEEEEET-TEEEEEEEEESS-----SSSEEEE--EEESEEETT-TSSEEEEEEEEE
T ss_pred EEEecccc-CcceEEEEEcCC-----cccCcee--Ccccccccc-cccccccceEEE
Confidence 98877654 445566777877 5899984 355433221 124677887443
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.21 Score=50.97 Aligned_cols=144 Identities=12% Similarity=0.155 Sum_probs=81.9
Q ss_pred ccCCcceEEE--CCEEEEEEEEecCCCeEEEEEEeCCCC---cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEe
Q 008686 61 MNDPNGPMIY--KGIYHFFYQYKLWDTVVWGHSTSTDMV---NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 61 ~nDPnG~~~~--~G~YHlfyq~~~~g~~~Wgha~S~Dlv---hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YT 135 (557)
.--|. ++|+ +++|+|+||+ + +.+.+||+|.. .|....+.+.........+..+-.+ +.+|++.|||+.
T Consensus 78 fwAPq-Vfyf~pk~kwYL~Yq~---~--~~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YLff~ 150 (303)
T cd08987 78 RVAPQ-VFYFAPQNKWYLIYQW---W--PAAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYLFFS 150 (303)
T ss_pred cccCE-EeeeccCCEEEEEEec---C--ceEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEEEEe
Confidence 45784 6655 6999999996 3 46799999975 6776555443322222335556666 456899999998
Q ss_pred eecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCC--eEEEEEeeecCCccE-EEEE
Q 008686 136 GIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDK--IWRVIIGSKINDTGL-AILY 212 (557)
Q Consensus 136 g~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g--~~~m~~ga~~~~~G~-i~ly 212 (557)
+-+ + .+..|-... .+|-.....++......-...-|.-|.| ++ .+| +|+|++-+.....++ -.-+
T Consensus 151 ~dn--G--~iyra~~~~------~nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~rYfrs~ 218 (303)
T cd08987 151 DDN--G--KLYRSSTTL------GNFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGRYFRSW 218 (303)
T ss_pred cCC--C--eEEEEecch------hhCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCCeEEEE
Confidence 643 2 344443322 1222211223332111111245677884 55 445 999999776432222 1226
Q ss_pred EeCCCC-CCEEc
Q 008686 213 RSKDFV-NWTKA 223 (557)
Q Consensus 213 ~S~Dl~-~W~~~ 223 (557)
+|+.|. .|+..
T Consensus 219 Ts~Sl~GpWt~~ 230 (303)
T cd08987 219 TATSLDGPWTPL 230 (303)
T ss_pred EcCCCCCCceec
Confidence 667763 68765
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=94.50 E-value=6.7 Score=41.01 Aligned_cols=150 Identities=17% Similarity=0.192 Sum_probs=84.4
Q ss_pred cCC-CeEEEEEEeCCC-CcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCC----------CcceEEEEE
Q 008686 82 LWD-TVVWGHSTSTDM-VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAG----------NKQVQNLAV 149 (557)
Q Consensus 82 ~~g-~~~Wgha~S~Dl-vhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~----------~~~~q~lA~ 149 (557)
..+ .+....++|+|. .+|.... ++..... ....+++++++.+.+|+++|||...... ......+..
T Consensus 41 D~~~~~~iv~~~S~D~G~tW~~~~-~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (351)
T cd00260 41 DRSNAIDIVARRSTDGGKTWSPST-VISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVY 118 (351)
T ss_pred CCCcccceeEEEeccCCCcccccE-EehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEE
Confidence 444 667888889884 8999853 3444332 2345788888876339999999876431 234577888
Q ss_pred EcCCCCCccceeecCCCCceEecC--CCCCCCCccCCe-EEEecCCCeEEEEEeeecCC--ccEEEEEEeCCCCCCEEcc
Q 008686 150 PKNLSDPYLKEWIKPPENPLMVPA--DQIDPGSFRDPT-TAWIGPDKIWRVIIGSKIND--TGLAILYRSKDFVNWTKAE 224 (557)
Q Consensus 150 s~d~~d~~l~~w~k~~~~Pvi~~p--~~~~~~~fRDP~-V~~~~~~g~~~m~~ga~~~~--~G~i~ly~S~Dl~~W~~~~ 224 (557)
|.|.+ ++|.+. ..+.... ..+ ..-++-|- .+-. ++|++++-+-..... .-...+|..++...|+..
T Consensus 119 S~D~G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~l-~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~- 189 (351)
T cd00260 119 SDDDG----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQM-KDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLG- 189 (351)
T ss_pred EEcCC----ceecCC--ccCCccccCcce-eEEEecCcCeEEe-cCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEEC-
Confidence 98875 799863 2333211 111 11223331 1223 468877665443321 223344544557999863
Q ss_pred cccccCCCCCceeecceEEec
Q 008686 225 QSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 225 ~~~~~~~~~~~~ECPdlf~l~ 245 (557)
.... ......| |.++++.
T Consensus 190 ~~~~--~~~~~~e-~~i~el~ 207 (351)
T cd00260 190 EGVN--DAGGCSE-CSVVELS 207 (351)
T ss_pred CCCC--CCCCCcC-CEEEEec
Confidence 3221 1123344 7788885
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.50 E-value=1.1 Score=49.43 Aligned_cols=146 Identities=12% Similarity=0.114 Sum_probs=78.1
Q ss_pred CCCCCccCCcceEEECCEEEEEEEEe-----cCCCeEEEEEEeCC-CCcceecCCCCCCCCCcCCCceEeeeEEEccCCe
Q 008686 56 PPSSWMNDPNGPMIYKGIYHFFYQYK-----LWDTVVWGHSTSTD-MVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGN 129 (557)
Q Consensus 56 p~~gw~nDPnG~~~~~G~YHlfyq~~-----~~g~~~Wgha~S~D-lvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~ 129 (557)
|-.|=+.-|+ |+|+||+|+|+|.-. .|.+++--..+.++ .=.|.+ |+.| |.. ..+++|.+.++||+
T Consensus 86 ~~S~giWAPd-l~y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~G~WsD-pi~l-~~~-----~~iDPslf~D~dGr 157 (549)
T COG3507 86 PYSGGIWAPD-LSYHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESIDGPWSD-PIKL-NGS-----NAIDPSLFFDKDGR 157 (549)
T ss_pred CCCCceeccc-eecCCCcEEEEEecccccCCcccccccEEEEecCCCCCccc-ceec-CCc-----CccCCceeecCCCC
Confidence 5566677885 889999999999544 22233333333333 225664 2222 222 25778888888999
Q ss_pred EEEEEeeecCC--CcceEEEEEEcCCCCCccceeecCCC--CceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-C
Q 008686 130 PAVLYTGIDAG--NKQVQNLAVPKNLSDPYLKEWIKPPE--NPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-N 204 (557)
Q Consensus 130 ~~l~YTg~~~~--~~~~q~lA~s~d~~d~~l~~w~k~~~--~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~ 204 (557)
.+|+|-+.+.. ....-.+-.+.... .+ .|..+ -.++-. +.+...-.-|. +++ ++|-|||+.+-+. .
T Consensus 158 ~wlv~~~w~~~~~~~~~~~i~l~~~~~----~~-~~l~g~~~~~~~~--G~~~~~~EGPh-l~k-~~gYYYL~~a~gG~t 228 (549)
T COG3507 158 KWLVNGSWDGGIFMHSFAGIILQEYDK----TT-QKLVGQGYKIIFD--GGNGGLTEGPH-LYK-KTGYYYLYVAEGGLT 228 (549)
T ss_pred EEEEecccCCCcccccccceeeeeccc----cc-cccCCccceeEec--cCCCccccCce-eec-cCCEEEEEEEcCCCC
Confidence 99999988642 11111112221110 11 12111 111211 11112334565 566 6888888875443 3
Q ss_pred Ccc-EEEEEEeCCCC
Q 008686 205 DTG-LAILYRSKDFV 218 (557)
Q Consensus 205 ~~G-~i~ly~S~Dl~ 218 (557)
..| .+.++||+.+.
T Consensus 229 ~~gh~~~vaRSKsid 243 (549)
T COG3507 229 TYGHAIRVARSKSID 243 (549)
T ss_pred ccceeEEEEeccCCC
Confidence 333 57899998764
|
|
| >PF13810 DUF4185: Domain of unknown function (DUF4185) | Back alignment and domain information |
|---|
Probab=92.00 E-value=4.2 Score=42.44 Aligned_cols=150 Identities=18% Similarity=0.173 Sum_probs=89.1
Q ss_pred CCcceEEECCEEEEEEEEe-cCCCe-------EEEEEEeCC-CCcceecCCCCCCCCCc-CCCc----eEeeeEEEccCC
Q 008686 63 DPNGPMIYKGIYHFFYQYK-LWDTV-------VWGHSTSTD-MVNWTPHDAAIYPSQPF-DANS----CWSGSVTILPGG 128 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~-~~g~~-------~Wgha~S~D-lvhW~~~~~aL~P~~~~-d~~g----v~SGsav~~~dg 128 (557)
=|.+.|-.+|+-+|.|+.. .|++. .=+.+.|+| .-+|+..+..+.+..+. .... -|.-.+....||
T Consensus 96 iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~~g~~~~~~~fq~~a~~~~dg 175 (316)
T PF13810_consen 96 IPTDGISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPFHPGFNQGNWNFQMAAFVKDDG 175 (316)
T ss_pred cccceEEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCcccccccccCCccccccccccccccCCCC
Confidence 4888899999999999998 66652 457899999 68999998666555411 1001 122234443567
Q ss_pred eEEEEEeeecCCCcceEEEEEEcCC--CCCc------cce--eecCCC--CceEecCCCCCCCCccCCeEEEecCCCeEE
Q 008686 129 NPAVLYTGIDAGNKQVQNLAVPKNL--SDPY------LKE--WIKPPE--NPLMVPADQIDPGSFRDPTTAWIGPDKIWR 196 (557)
Q Consensus 129 ~~~l~YTg~~~~~~~~q~lA~s~d~--~d~~------l~~--w~k~~~--~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~ 196 (557)
-.|+|=|...+ .....||...-. .|+. ... |.+... .||+..+. ---+|.|.+..|+|+
T Consensus 176 yVYv~gt~~~R--~g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~v-------gElSv~~~~~~gk~V 246 (316)
T PF13810_consen 176 YVYVYGTPFGR--NGGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGPV-------GELSVRYNEYLGKWV 246 (316)
T ss_pred EEEEEeCCCCC--CCcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCCc-------cceEEEEeCCCCEEE
Confidence 67777665443 233445543211 1100 012 654221 35654332 233466776789999
Q ss_pred EEEeeecCCccEEEEEEeCCCC-CCEEc
Q 008686 197 VIIGSKINDTGLAILYRSKDFV-NWTKA 223 (557)
Q Consensus 197 m~~ga~~~~~G~i~ly~S~Dl~-~W~~~ 223 (557)
|+.... ..+.|.+.++++.. .|...
T Consensus 247 l~~~~~--~~~~I~~RtA~~P~GpWs~~ 272 (316)
T PF13810_consen 247 LSYFDA--GTGGIVLRTAPSPTGPWSEP 272 (316)
T ss_pred EEEecc--cCCcEEEEecCCCCCCCCCC
Confidence 998643 33578888888876 58743
|
|
| >PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A | Back alignment and domain information |
|---|
Probab=90.83 E-value=1.7 Score=45.15 Aligned_cols=142 Identities=16% Similarity=0.218 Sum_probs=71.1
Q ss_pred CCcceEEECCEEEEEEEEe--cCCC--eEEEEEEeCCC-CcceecCCCCCCC--CCcCCCceE--eeeEEEccCCeEEEE
Q 008686 63 DPNGPMIYKGIYHFFYQYK--LWDT--VVWGHSTSTDM-VNWTPHDAAIYPS--QPFDANSCW--SGSVTILPGGNPAVL 133 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~--~~g~--~~Wgha~S~Dl-vhW~~~~~aL~P~--~~~d~~gv~--SGsav~~~dg~~~l~ 133 (557)
.|- .+..+++.+|+.-.+ ..+. -..-++.|+|- +.|.+... |... ..+. ... -||-|+.+||++++=
T Consensus 62 rPT-tvvkgn~IymLvG~y~~~~~~~~~~llLvks~~~g~~W~~~~~-l~~~~~~~~~--~figgGGSGV~m~dGTLVFP 137 (310)
T PF13859_consen 62 RPT-TVVKGNKIYMLVGSYSRSAGADDWGLLLVKSTDGGIKWGDTKS-LPSTSFQSWK--QFIGGGGSGVVMEDGTLVFP 137 (310)
T ss_dssp EEE-EEEETTEEEEEEEEESS--SSTTEEEEEEEEESSSSEE---EE--GGGS-EEEE--EEEE-SEE-EE-TTS-EEEE
T ss_pred eee-eeecceeEEEEEEEEeccccccccceeeeeccCCcceeeeccc-CCchhccccc--eeecCCCCceEEcCCCEEEE
Confidence 564 344566777776444 2232 33345566654 68987532 2111 1111 111 145566679998877
Q ss_pred EeeecCCCc-ceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEE
Q 008686 134 YTGIDAGNK-QVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILY 212 (557)
Q Consensus 134 YTg~~~~~~-~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly 212 (557)
-.+....+. ..-.|.+|+|.+ .+|+-..+ .....++||.|+-. ++|+-.|+.. ..+ |+-.+|
T Consensus 138 v~a~~~~~~~~~SlIiYS~d~g----~~W~lskg---------~s~~gC~~psv~EW-e~gkLlM~~~-c~~--g~rrVY 200 (310)
T PF13859_consen 138 VQATKKNGDGTVSLIIYSTDDG----KTWKLSKG---------MSPAGCSDPSVVEW-EDGKLLMMTA-CDD--GRRRVY 200 (310)
T ss_dssp EEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE--TTEEEEEEE--TT--S---EE
T ss_pred EeeeccCccceEEEEEEECCCc----cceEeccc---------cCCCCcceEEEEec-cCCeeEEEEe-ccc--ceEEEE
Confidence 777665555 366788998864 78985322 12257889997755 5778777743 322 445689
Q ss_pred EeCCC-CCCEEccc
Q 008686 213 RSKDF-VNWTKAEQ 225 (557)
Q Consensus 213 ~S~Dl-~~W~~~~~ 225 (557)
+|.|. ..|+..-.
T Consensus 201 eS~DmG~tWtea~g 214 (310)
T PF13859_consen 201 ESGDMGTTWTEALG 214 (310)
T ss_dssp EESSTTSS-EE-TT
T ss_pred EEcccceehhhccC
Confidence 99886 78997543
|
|
| >COG3940 Predicted beta-xylosidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.76 E-value=1.4 Score=42.79 Aligned_cols=102 Identities=15% Similarity=0.272 Sum_probs=64.6
Q ss_pred eEEECC-EEEEEEEEe--cCCCeEEEEEEeCCCCcceecCCCC-CCCCCcCCCceEe--eeEEEccCCeEEEEEeeecCC
Q 008686 67 PMIYKG-IYHFFYQYK--LWDTVVWGHSTSTDMVNWTPHDAAI-YPSQPFDANSCWS--GSVTILPGGNPAVLYTGIDAG 140 (557)
Q Consensus 67 ~~~~~G-~YHlfyq~~--~~g~~~Wgha~S~DlvhW~~~~~aL-~P~~~~d~~gv~S--Gsav~~~dg~~~l~YTg~~~~ 140 (557)
.++++| .|+++-|.. .-|+..+..|.-.+-.+-+-.|+.| .|.-+|+..|.|- |.||+..+|++.+-|++...+
T Consensus 137 tfeh~gk~yyvwaqkdp~i~gnsniyiaemenpwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ysasatd 216 (324)
T COG3940 137 TFEHNGKLYYVWAQKDPNIKGNSNIYIAEMENPWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYSASATD 216 (324)
T ss_pred eeeeCCEEEEEEeccCCCccCCcceEEEeccCCceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEeccccc
Confidence 345666 577777776 5677777777766643333345555 4556788778664 888887899999999876543
Q ss_pred CcceEEEEEEcCC---CCCccceeecCCCCceEe
Q 008686 141 NKQVQNLAVPKNL---SDPYLKEWIKPPENPLMV 171 (557)
Q Consensus 141 ~~~~q~lA~s~d~---~d~~l~~w~k~~~~Pvi~ 171 (557)
-.-..+|-+.... -|+ .+|+|.+ .||+.
T Consensus 217 ~nycmgllwanen~dlldp--aswtksp-tpvf~ 247 (324)
T COG3940 217 VNYCMGLLWANENSDLLDP--ASWTKSP-TPVFK 247 (324)
T ss_pred cceeeeeeeecccCCcCCc--hhcccCC-Cccee
Confidence 2222333333222 233 5899974 78884
|
|
| >COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.51 E-value=9.9 Score=41.94 Aligned_cols=111 Identities=16% Similarity=0.125 Sum_probs=66.6
Q ss_pred CCCCCC--cCCCceEeeeEEEccCCeEEEEEeeecC---CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCC
Q 008686 106 IYPSQP--FDANSCWSGSVTILPGGNPAVLYTGIDA---GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGS 180 (557)
Q Consensus 106 L~P~~~--~d~~gv~SGsav~~~dg~~~l~YTg~~~---~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~ 180 (557)
+.|... .|.+| ++..+|+|++||-=+.. .+...=+.|+|+| |.+|+.. .+++.|...++...
T Consensus 34 ftP~~G~mNDPNG------~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~--piaL~Pd~~~d~~g 100 (486)
T COG1621 34 FTPPTGWLNDPNG------LIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKD-----LVHWEHL--PIALAPDDDYDSHG 100 (486)
T ss_pred ecCCcCceECCCc------eeEECCEEEEEEecCCCCCCCCCceeeeeccCC-----cccceEC--CceecCCCccccCC
Confidence 445443 36666 33348999999975432 1334447799987 5899974 24555555445555
Q ss_pred ccCCeEEEecCCCeEEEEEeeecC---Ccc-EEEEEEeCCCCCCEEc-ccccccC
Q 008686 181 FRDPTTAWIGPDKIWRVIIGSKIN---DTG-LAILYRSKDFVNWTKA-EQSLYST 230 (557)
Q Consensus 181 fRDP~V~~~~~~g~~~m~~ga~~~---~~G-~i~ly~S~Dl~~W~~~-~~~~~~~ 230 (557)
..--.+|-. .++.+.|+-|...+ .+. .=.++.|+|..++++. +.++...
T Consensus 101 ~ySGSAV~~-~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~~ 154 (486)
T COG1621 101 CYSGSAVVD-DGNLSLFYTGNVRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIIDQ 154 (486)
T ss_pred ceeeeEEEe-CCcEEEEEccceeccCCcceeEEEEEEEcCCCceEeccCCceecC
Confidence 555554433 46677777665442 122 2357888888888773 5555543
|
|
| >PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=84.65 E-value=36 Score=36.93 Aligned_cols=124 Identities=15% Similarity=0.183 Sum_probs=81.1
Q ss_pred CCEEEEEEEEe-----cCC-----CeEEEEEEeCC----CCcceecCCCCCCCCCcCC-------CceEeeeEEEc-cCC
Q 008686 71 KGIYHFFYQYK-----LWD-----TVVWGHSTSTD----MVNWTPHDAAIYPSQPFDA-------NSCWSGSVTIL-PGG 128 (557)
Q Consensus 71 ~G~YHlfyq~~-----~~g-----~~~Wgha~S~D----lvhW~~~~~aL~P~~~~d~-------~gv~SGsav~~-~dg 128 (557)
+|+..|||... .-. ...-++..+.| +-.|+.+.+.+.|++.+.. ...-.+.++.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 69999999995 111 24556777777 5577777777888875321 34567888876 589
Q ss_pred eEEEEEeeecCC--------C------------------------cceEEEEEEcCCCCCccceeecCCCCceEecCCCC
Q 008686 129 NPAVLYTGIDAG--------N------------------------KQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQI 176 (557)
Q Consensus 129 ~~~l~YTg~~~~--------~------------------------~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~ 176 (557)
+.||++.|+... + ...++||...+.. ...|+-+ .|+|....
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~--~PL~~a~~-- 295 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELL--PPLLSANG-- 295 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEE--EEEEEETT--
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEe--Ccceeccc--
Confidence 999999987531 0 1236788877643 3568875 48996532
Q ss_pred CCCCccCCeEEEecCCCeEEEEEeeec
Q 008686 177 DPGSFRDPTTAWIGPDKIWRVIIGSKI 203 (557)
Q Consensus 177 ~~~~fRDP~V~~~~~~g~~~m~~ga~~ 203 (557)
-.....-|.||.+ +|+||++..++.
T Consensus 296 v~de~ERP~iv~~--~gkyYLFt~s~~ 320 (428)
T PF02435_consen 296 VNDELERPHIVFM--NGKYYLFTISHL 320 (428)
T ss_dssp TBS-EEEEEEEEE--TTEEEEEEEEEG
T ss_pred ccccccCCcEEEE--CCEEEEEEEecc
Confidence 1345677887655 899999988875
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 557 | ||||
| 2ac1_A | 541 | Crystal Structure Of A Cell-Wall Invertase From Ara | 0.0 | ||
| 2xqr_A | 537 | Crystal Structure Of Plant Cell Wall Invertase In C | 0.0 | ||
| 2qqu_A | 535 | Crystal Structure Of A Cell-Wall Invertase (D239a) | 0.0 | ||
| 2oxb_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203q) | 0.0 | ||
| 2qqw_A | 537 | Crystal Structure Of A Cell-Wall Invertase (D23a) F | 0.0 | ||
| 2qqv_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203a) | 0.0 | ||
| 1st8_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia Fro | 1e-178 | ||
| 2aez_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia (E2 | 1e-178 | ||
| 3ugf_A | 546 | Crystal Structure Of A 6-Sst6-Sft From Pachysandra | 1e-115 | ||
| 1uyp_A | 432 | The Three-Dimensional Structure Of Beta-Fructosidas | 3e-29 | ||
| 1w2t_A | 432 | Beta-Fructosidase From Thermotoga Maritima In Compl | 1e-28 | ||
| 3pig_A | 526 | Beta-Fructofuranosidase From Bifidobacterium Longum | 2e-28 | ||
| 1y9m_A | 518 | Crystal Structure Of Exo-Inulinase From Aspergillus | 2e-22 | ||
| 3sc7_X | 516 | First Crystal Structure Of An Endo-Inulinase, From | 2e-19 | ||
| 3kf5_A | 512 | Structure Of Invertase From Schwanniomyces Occident | 2e-12 | ||
| 3kf3_A | 509 | Structure Of Fructofuranosidase From Schwanniomyces | 2e-12 | ||
| 3u75_A | 535 | Structure Of E230a-Fructofuranosidase From Schwanni | 1e-11 | ||
| 4ffg_A | 492 | Crystal Structure Of Levan Fructotransferase From A | 1e-11 | ||
| 4fff_A | 490 | Crystal Structure Of Levan Fructotransferase From A | 2e-11 | ||
| 3u14_A | 535 | Structure Of D50a-Fructofuranosidase From Schwannio | 2e-11 | ||
| 4ffh_A | 492 | Crystal Structure Of Levan Fructotransferase D54n M | 6e-11 |
| >pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From Arabidopsis Thaliana Length = 541 | Back alignment and structure |
|
| >pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor Length = 537 | Back alignment and structure |
|
| >pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From Arabidopsis Thaliana In Complex With Sucrose Length = 535 | Back alignment and structure |
|
| >pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From Cichorium Intybus Length = 543 | Back alignment and structure |
|
| >pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q) From Cichorium Intybus In Complex With 1-Kestose Length = 543 | Back alignment and structure |
|
| >pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis Length = 546 | Back alignment and structure |
|
| >pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase (Invertase) From Thermotoga Maritima Length = 432 | Back alignment and structure |
|
| >pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With Raffinose Length = 432 | Back alignment and structure |
|
| >pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum Length = 526 | Back alignment and structure |
|
| >pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus Awamori In Spacegroup P212121 Length = 518 | Back alignment and structure |
|
| >pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From Aspergillus Ficuum: Structural Analysis And Comparison With Other Gh32 Enzymes. Length = 516 | Back alignment and structure |
|
| >pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis Length = 512 | Back alignment and structure |
|
| >pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructose Length = 509 | Back alignment and structure |
|
| >pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructosylnystose Length = 535 | Back alignment and structure |
|
| >pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens In Complex With Dfa-Iv Length = 492 | Back alignment and structure |
|
| >pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens Length = 490 | Back alignment and structure |
|
| >pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Inulin Length = 535 | Back alignment and structure |
|
| >pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant From Arthrobacter Ureafaciens In Complex With Sucrose Length = 492 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 557 | |||
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 0.0 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 0.0 | |
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 0.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 0.0 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 1e-164 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 1e-161 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 1e-160 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 1e-150 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 1e-136 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 1e-123 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 1e-08 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 4e-07 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 6e-07 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 2e-06 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 2e-04 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 1e-05 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 3e-05 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 1e-04 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 6e-04 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 1e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-04 |
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* Length = 543 | Back alignment and structure |
|---|
Score = 665 bits (1716), Expect = 0.0
Identities = 286/534 (53%), Positives = 390/534 (73%), Gaps = 22/534 (4%)
Query: 44 TSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQY----KLW-DTVVWGHSTSTDMVN 98
QPYRTGYHFQPPS+WMNDPNGPM+Y+G+YHFFYQY + D ++WGH+ S D+VN
Sbjct: 3 IEQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVN 62
Query: 99 WTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYL 158
W D AIYP+Q D+ SCWSGS TILPG PA+LYTG D+ ++QVQ+LA PKNLSDP+L
Sbjct: 63 WIHLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFL 122
Query: 159 KEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFV 218
+EW+K P+NPL+ P + + FRDP+TAW+GPD +WR+++G ++ G+A LY+S DFV
Sbjct: 123 REWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFV 182
Query: 219 NWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYT 278
NW + +Q L S + +G WECPDF+PV S G+DTSV G +++HV+K + D+YT
Sbjct: 183 NWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFEGH--DWYT 240
Query: 279 IGTYNITTDTYIAEEGSFDDNS--GLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRS 336
IGTY+ + ++ + G S LRYDYG+FY SK+FFD AKNRR+LW W+ E+ +++
Sbjct: 241 IGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQA 300
Query: 337 DNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGI 396
D+++KGWAGLQ+ PR LW+D++G+QL+QWP+ EIE+LR NQV K L+ GS++ I GI
Sbjct: 301 DDIEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGI 360
Query: 397 TAAQADVEISFQTTAFEKAEVLDSIWTNPQFLC------------PFGLLVLASNGLQEY 444
A+QADV ISF+ ++AEVLD+ +PQ LC PFGLL +AS L+E
Sbjct: 361 AASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLKEQ 420
Query: 445 TAVFFRIFKGQD-RHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSI 503
+A+FFR+F+ Q R+ VLMCSD SRS++ + D TSYGAF+D+DP E++S+R+LID SI
Sbjct: 421 SAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDHSI 480
Query: 504 VESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
+ESFG GGK CIT+RIYP +++AHL+ FNNGT+ V I+ + AWSMK A+
Sbjct: 481 IESFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAKFV 534
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* Length = 541 | Back alignment and structure |
|---|
Score = 659 bits (1701), Expect = 0.0
Identities = 316/542 (58%), Positives = 402/542 (74%), Gaps = 26/542 (4%)
Query: 41 SSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQY----KLWDTVVWGHSTSTDM 96
S +QPYRTG+HFQPP +WMNDPNGPMIYKGIYH FYQ+ +W +VW HSTSTD+
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL 60
Query: 97 VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDP 156
+NW PH AI+PS PFD N CWSGS TILP G P +LYTGID N+QVQN+A PKNLSDP
Sbjct: 61 INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP 120
Query: 157 YLKEWIKPPENPLMVPADQIDPGS--FRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRS 214
YL+EW K P NPLM P + FRDPTTAW+G DK WRVIIGSKI+ GLAI Y S
Sbjct: 121 YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS 180
Query: 215 KDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPN---IKHVLKVSLSN 271
KDF+ W K+ + L+ + SGMWECPDFFPV+ GV+TS G +KHVLK+SL +
Sbjct: 181 KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 240
Query: 272 YQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINE 331
+ DYYTIGTY+ D ++ + G D + RYDYGK+Y SKTFFDSAKNRRILWGW NE
Sbjct: 241 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE 300
Query: 332 SSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVK-WPAKLLERGSM 390
SS+ D+++KGW+G+Q PR +WLD+SG+QL+QWP+ E+E+LR QVK K+L+ GS
Sbjct: 301 SSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSR 360
Query: 391 VGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLC------------PFGLLVLAS 438
+ + G+TAAQADVE+ F+ EKA+V++ WT+PQ +C PFGL+VLAS
Sbjct: 361 LEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLAS 420
Query: 439 NGLQEYTAVFFRIFKGQD---RHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSI 495
L+EYT+V+FRIFK + +++VLMCSDQSRSS+ +DNDKT+YGAF+D++P H+ LS+
Sbjct: 421 KNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSL 479
Query: 496 RSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQ 555
R+LID S+VESFGG G+ACIT+R+YP LAI +HL+AFN G + V++ +L AWSM AQ
Sbjct: 480 RALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQ 539
Query: 556 IN 557
I+
Sbjct: 540 IS 541
|
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* Length = 546 | Back alignment and structure |
|---|
Score = 629 bits (1624), Expect = 0.0
Identities = 218/536 (40%), Positives = 309/536 (57%), Gaps = 23/536 (4%)
Query: 41 SSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQY----KLWDTVVWGHSTSTDM 96
S+ RT +HFQP SWM+DP+GP+ YKG YHFFYQY +W WGH+ S D+
Sbjct: 11 SNAQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDL 70
Query: 97 VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDP 156
++W A+ Q +D +SGS T LP G +LYTG+ ++ +LA P +LSDP
Sbjct: 71 IHWLYLPLALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDP 130
Query: 157 YLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKD 216
L EW+K P NP++ + P FRD +T W + WR+ IG+K N TG+A++Y +KD
Sbjct: 131 LLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVYETKD 190
Query: 217 FVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDY 276
F ++ E+ L++ +G+WEC D +PVST KG++TSV GP +KHVLK S+ Q+DY
Sbjct: 191 FKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQRDY 250
Query: 277 YTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRS 336
Y IGTY++ T+ + + D GLRYD+GK+Y SKTF+D K RR++W W E +
Sbjct: 251 YAIGTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEV 310
Query: 337 DNLKKGWAGLQATPRNLWLD-KSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITG 395
+ +KGWA +Q PR + LD K+G ++ WP+ E+E LR + ++ GS+V +
Sbjct: 311 ADREKGWANVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDV 370
Query: 396 ITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLC-------------PFGLLVLASNGLQ 442
TA Q D+ F+ +K + +I + + C PFGLLV A+ L
Sbjct: 371 GTATQLDIIAEFE---IDKEALEGTIEADMGYNCTTSGGAAERGVLGPFGLLVSATENLS 427
Query: 443 EYTAVFFRIFKGQD-RHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDR 501
E T V+F I KG D C D+SRSS D K G + + EK ++R L+D
Sbjct: 428 EQTPVYFYIAKGTDGNFKTFFCLDESRSSKASDVSKQVKGFTVPVLD-GEKFTMRLLVDH 486
Query: 502 SIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
SIVESF GG++CIT+R+YPT AI+ A L+ FNN T SL+ W M A I
Sbjct: 487 SIVESFAQGGRSCITSRVYPTEAIYGAAKLFLFNNATGASITASLKIWEMNSAFIQ 542
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* Length = 518 | Back alignment and structure |
|---|
Score = 520 bits (1341), Expect = 0.0
Identities = 123/547 (22%), Positives = 195/547 (35%), Gaps = 71/547 (12%)
Query: 45 SQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQY----KLWDTVVWGHSTSTDMVNWT 100
QPYR YHF P +WMNDPNG + + G YH F+QY W + WGH+ S D+ +W
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWE 63
Query: 101 PHDAAIYPSQPFD--ANSCWSGSVTILPGGNPA----------VLYTGI----------- 137
A+ +SGS +YT
Sbjct: 64 EKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQ 123
Query: 138 -DAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPAD---QIDPGSFRDPTTAWIGPDK 193
++Q Q++A D L NP++ + + +FRDP W +
Sbjct: 124 TVQEDQQSQSIAYS---LDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQ 180
Query: 194 IWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKG-- 251
W V+ I + +Y S + +W + Q G+WECP + S
Sbjct: 181 KWVVVTS--IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSGNSTK 238
Query: 252 -VDTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-F 309
V TS + P S Y +G ++ TT T A+ +++ D+G F
Sbjct: 239 WVITSGLNPGGPPGTVGS-----GTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPDF 293
Query: 310 YGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQ--LMQWPI 367
Y + + + N + GW+N ++ W A PR++ L G + L+Q P
Sbjct: 294 YAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQPQ 353
Query: 368 SEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQF 427
+ + + T T V++SF +
Sbjct: 354 EAWSSISNKRPIYSRTFKTLSEGSTNTTTTGETFKVDLSFSAKSKAS------------- 400
Query: 428 LCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLD 487
F + + AS E T V + K Q I L + S D+ + Y L D
Sbjct: 401 --TFAIALRASANFTEQTLVGYDFAKQQ---IFLDRTH-SGDVSFDETFASVYHGPLTPD 454
Query: 488 PVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLR 547
+ + +DRS VE FGG G+ +TA+I+P+ D H + G
Sbjct: 455 S-TGVVKLSIFVDRSSVEVFGGQGETTLTAQIFPS---SDAVHARLASTGGT-TEDVRAD 509
Query: 548 AWSMKKA 554
+ +
Sbjct: 510 IYKIAST 516
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* Length = 526 | Back alignment and structure |
|---|
Score = 476 bits (1227), Expect = e-164
Identities = 117/527 (22%), Positives = 189/527 (35%), Gaps = 60/527 (11%)
Query: 41 SSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQY----KLWDTVVWGHSTSTDM 96
++ + + YH W+NDPNG YKG +H FYQ W + WGH +STDM
Sbjct: 32 AAKRNNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDM 91
Query: 97 VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGI--------DAGNKQVQNLA 148
+NW PS + + +SGS I G+ YTG G+ QVQ A
Sbjct: 92 LNWKREPIMFAPSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTA 151
Query: 149 VPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSK-INDTG 207
+P + L + ++ +RDP W + G + G
Sbjct: 152 LPD---NDEL--TSATKQGMIIDCPTDKVDHHYRDPKVWK--TGDTWYMTFGVSSADKRG 204
Query: 208 LAILYRSKDFVNWTKAEQSLYSTNQSG-MWECPDFFPVSTKSPKGVDTSVIGPNIKHVLK 266
L+ SKD V W + M ECPDF P+ K
Sbjct: 205 QMWLFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGFSAMGSKPSG 264
Query: 267 VSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRIL 325
N Y IGT+ + + +D G +Y ++F R+I+
Sbjct: 265 FMNRNVSNAGYMIGTWEPGGEF-------KPETEFRLWDCGHNYYAPQSFNV--DGRQIV 315
Query: 326 WGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLL 385
+GW++ GW G PR + L G ++ P++E+E LR + + + L
Sbjct: 316 YGWMSPFVQPIPMEDDGWCGQLTLPREITLGDDGD-VVTAPVAEMEGLREDTLDHGSVTL 374
Query: 386 ERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCPFGLLVLASNGLQEYT 445
+ I A ++E++ A GL + A+ YT
Sbjct: 375 DMDGEQ-IIADDAEAVEIEMTIDLAASTAE--------------RAGLKIHATED-GAYT 418
Query: 446 AVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVE 505
V + GQ +V+ R ++ + + D + KL +R +DR VE
Sbjct: 419 YVAYD---GQIGRVVV-----DRQAMANGDRGYRAAPLTDAELASGKLDLRVFVDRGSVE 470
Query: 506 SFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMK 552
+ GG +++ Y + + + + SL+ MK
Sbjct: 471 VYVNGGHQVLSSYSYAS---EGPRAIKLVAESGS-LKVDSLKLHHMK 513
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} Length = 516 | Back alignment and structure |
|---|
Score = 468 bits (1207), Expect = e-161
Identities = 119/553 (21%), Positives = 204/553 (36%), Gaps = 92/553 (16%)
Query: 37 QSFSSSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQY----KLWDTVVWGHST 92
+ S S YR YHF P WMN+PNG + +H F+Q+ +W + WGH+T
Sbjct: 17 LTLPSQAQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHAT 76
Query: 93 STDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPA----------VLYTG-IDAGN 141
STD+++W AI + ++G+ P +TG +
Sbjct: 77 STDLMHWAHKPTAIADENGVE---AFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQ 133
Query: 142 KQVQNLAVPKNLSDPYLKEWIKPPENPLM-----VPADQIDPGSFRDPTTAWIGPDKIWR 196
Q Q LA + W K NP++ P D RDP + W
Sbjct: 134 TQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQSGNWI 189
Query: 197 VIIGSKINDTGLAILYRSKDFVNWT-----KAEQSLYSTNQSGMWECPDFFPVSTKSPKG 251
+++ D + S D +NWT K+ ++ WE PD F + + +
Sbjct: 190 MVLAHGGQDK--LSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELPVEGTEE 247
Query: 252 VDTSVIGPNIKHVLKVSL-----SNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDY 306
V+ ++ + G+++ + T D S + D
Sbjct: 248 T---------TWVVMMTPAEGSPAGGNGVLAITGSFDGKSFTAD-----PVDASTMWLDN 293
Query: 307 GK-FYGSKTFFD--SAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQ-- 361
G+ F G+ ++ + ++ RRI+ +N + W G+ + PR L L K G Q
Sbjct: 294 GRDFDGALSWVNVPASDGRRIIAAVMNSYGSNPP--TTTWKGMLSFPRTLSLKKVGTQQH 351
Query: 362 LMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSI 421
+Q PI+E++ + + + + G + ++ I DV ++F A
Sbjct: 352 FVQQPITELDTISTSLQILANQTITPGQTL-LSSIRGTALDVRVAFYPDAGSV------- 403
Query: 422 WTNPQFLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDND--KTS 479
L V G E T + + + D++ S +
Sbjct: 404 ---------LSLAV--RKGASEQTVIKYTQSDAT------LSVDRTESGDISYDPAAGGV 446
Query: 480 YGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTE 539
+ A L+ D +SIR L+D VE FGG G+A I+ I+P+ + D L
Sbjct: 447 HTAKLEEDG-TGLVSIRVLVDTCSVEVFGGQGEAVISDLIFPSDSS-DGLALEVTGG--- 501
Query: 540 KVNITSLRAWSMK 552
+ S+ S+
Sbjct: 502 NAVLQSVDVRSVS 514
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A Length = 492 | Back alignment and structure |
|---|
Score = 464 bits (1196), Expect = e-160
Identities = 104/534 (19%), Positives = 189/534 (35%), Gaps = 81/534 (15%)
Query: 52 YHFQPPSSWMNDPNGPMIYKGIYHFFYQY--KLWDTVVWGHSTSTDMVNWTPHDAAIYPS 109
YH PPS W+ +P P+ G Y +Y + + W H+++TD V +T H +
Sbjct: 4 YHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNNGPGGWDHASTTDGVAFTHHGTVMPLR 63
Query: 110 QPFDANSCWSGSVTILPG-------GNPAVLYTGIDAGNK--QVQNLAVPKN-------L 153
F WSGS + G L T G + Q Q L + L
Sbjct: 64 PDFP---VWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFTAL 120
Query: 154 SDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYR 213
DP + + PA+ + FRDP W W +IG A Y
Sbjct: 121 PDPVI---VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIGRL----RYAAFYT 173
Query: 214 SKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQ 273
S + +WT Y + G ECPD F ++ VL S+ Y
Sbjct: 174 SPNLRDWTLRRNFDYPNHALGGIECPDLFEITAD----------DGTRHWVLAASMDAYG 223
Query: 274 QDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTF--FDSAKNRRILWGWIN 330
Y T T+ E+ DD + D+G +Y + T+ D+ + +R+ W+N
Sbjct: 224 IGLPMTYAY--WTGTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAPETKRLAIAWMN 281
Query: 331 ESSTRSDNL----KKGWAGLQATPRNLWLDK---SGRQLMQWPISEIEKLRGNQVKWPAK 383
+ ++ G+ G + R L L + L+ P++ + P +
Sbjct: 282 NWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLPDR 341
Query: 384 LLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCPFGLLVLASNGLQE 443
++ +++ G A + +++I++ T G+ V S
Sbjct: 342 TVDGSAVLPWNG-RAYEIELDIAWDTAT------------------NVGISVGRSPDGTR 382
Query: 444 YTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSI 503
+T + ++ + D+ S + + A +DP + +R L+D
Sbjct: 383 HTNI--------GKYGADLYVDRGPSDLAGYSLAPYSRAAAPIDPGARSVHLRILVDTQS 434
Query: 504 VESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557
VE F G ++ +++ + + +G + T + + +A +
Sbjct: 435 VEVFVNAGHTVLSQQVHFA---EGDTGISLYTDGGP-AHFTGIVVREIGQAILE 484
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* Length = 509 | Back alignment and structure |
|---|
Score = 440 bits (1133), Expect = e-150
Identities = 100/548 (18%), Positives = 180/548 (32%), Gaps = 75/548 (13%)
Query: 41 SSITSQPYRTGYHFQPPSSWMNDPNGPMIYK--GIYHFFYQY----KLW-DTVVWGHSTS 93
S TS+ R HF P WMNDPNG K ++H ++QY W + WGH+TS
Sbjct: 2 SVDTSEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATS 61
Query: 94 TDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNK----------- 142
D+V+W H+ AI P D +SGS+ + + ID +
Sbjct: 62 NDLVHWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPD 119
Query: 143 -QVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGS 201
Q Q++A + + K NP++ + FRDP W W +++
Sbjct: 120 NQTQDIAFSLDGG----YTFTKYENNPVI----DVSSNQFRDPKVFWHEDSNQWIMVVSK 171
Query: 202 KINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGV-DTSVIGPN 260
++ S + NW + S +ECP V ++ + N
Sbjct: 172 S--QEYKIQIFGSANLKNWVL-NSNFSSGYYGNQYECPGLIEVPIENSDKSKWVMFLAIN 228
Query: 261 IKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSA 319
L S + Y +G ++ DD+ D GK FY +TF +
Sbjct: 229 PGSPLGGS-----INQYFVGDFDGFQ-------FVPDDSQTRFVDIGKDFYAFQTFSE-V 275
Query: 320 KNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWL-------DKSGRQLMQWPISEIEK 372
++ + W + W + RN L + L+Q P+
Sbjct: 276 EHGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSI 335
Query: 373 LRGNQVKWPAKLLERGSMVGIT-GITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCPF 431
+++K L + + D I+F+ + F
Sbjct: 336 NVVDKLKKKNVKLTNKKPIKTNFKGSTGLFDFNITFKVLNLNVSPGKT----------HF 385
Query: 432 GLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDND------KTSYGAFLD 485
+L+ + ++ Q + D+ ++ +Y LD
Sbjct: 386 DILINSQELNSSVDSIKIGFDSSQSSFYI----DRHIPNVEFPRKQFFTDKLAAYLEPLD 441
Query: 486 LDPVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITS 545
D S+ ++D++I+E + G +T + + + + S
Sbjct: 442 YDQDLRVFSLYGIVDKNIIELYFNDGTVAMTNTFFMGEGKYPHDIQIVTDTEEPLFELES 501
Query: 546 LRAWSMKK 553
+ + K
Sbjct: 502 VIIRELNK 509
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* Length = 432 | Back alignment and structure |
|---|
Score = 400 bits (1030), Expect = e-136
Identities = 111/516 (21%), Positives = 205/516 (39%), Gaps = 100/516 (19%)
Query: 48 YRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQY----KLWDTVVWGHSTSTDMVNWTPHD 103
++ YHF P + WMNDPNG + +KG YH FYQY W + WGH+ S D+V+W
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLP 61
Query: 104 AAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGI-----DAGNKQVQNLAVPKNLSDPYL 158
A+YP + + +SGS + G ++YT + G K+ Q + + +N D
Sbjct: 62 VALYPDD--ETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLD--- 115
Query: 159 KEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND-TGLAILYRSKDF 217
++K NP++ + +FRDP + WR+++GS ++ G +LY S D
Sbjct: 116 --FVKYDGNPVISKPPEEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDDL 171
Query: 218 VNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYY 277
+W E +++ + +CPD + K +L S+++ +
Sbjct: 172 FHWKY-EGAIFEDETTKEIDCPDLVRI---------------GEKDILIYSITSTNSVLF 215
Query: 278 TIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINE--SST 334
++G EG + D+G FY ++TFF +R ++ GW+ +
Sbjct: 216 SMGELK---------EGKLNVEKRGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRTG 264
Query: 335 RSDNLKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGIT 394
++GW G+ + PR L+++ +L P+ E+ LR +V AK +
Sbjct: 265 LYPTKREGWNGVMSLPRELYVE--NNELKVKPVDELLALRKRKVFETAKSGTF-----LL 317
Query: 395 GITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCPFGLLVLASNGLQEYTAVFFRIFKG 454
+ ++ F + E L + + +
Sbjct: 318 DVKENSYEIVCEF-SGEIE--------------------LRMGNESEEVV-------ITK 349
Query: 455 QDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKAC 514
+++ D +RS ++ + S IR+ +D VE F
Sbjct: 350 SRDELIV---DTTRSGVSGGEVRKSTV------EDEATNRIRAFLDSCSVEFFFNDSI-A 399
Query: 515 ITARIYPTLAIHDKAHLYAFNNGTEKVNITSLR-AW 549
+ RI+P + ++ + + K+ + L W
Sbjct: 400 FSFRIHPE----NVYNILSVKSNQVKLEVFELENIW 431
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* Length = 634 | Back alignment and structure |
|---|
Score = 374 bits (961), Expect = e-123
Identities = 82/628 (13%), Positives = 179/628 (28%), Gaps = 133/628 (21%)
Query: 37 QSFSSSITSQPYRTGYHFQPPSSWMNDPNGPM--IYKGIYHFFYQYKLWDTVVWGHSTST 94
+ ++ +R H P + DP G++H + D +T+
Sbjct: 15 STLPNNTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFL---HDGDGIAGATTA 71
Query: 95 DMVNWTPHD----AAIYPSQPFDANSCWSGS-VTILPGGNPAVLYTGIDA---------- 139
++ +T I P D + + G+ + + P +LYT +
Sbjct: 72 NLATYTDTSDNGSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYT 131
Query: 140 GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMV-PADQIDPGSFRDP-------------- 184
+ Q+LAV + + + K + P++ +D +FR P
Sbjct: 132 RGSETQSLAV----ARDGGRRFDKLDQGPVIADHPFAVDVTAFRAPFVFRSARLDVLLSL 187
Query: 185 --------------TTAWIGPDKIWRVIIGSKINDTGLAIL------YRSKDFVNWT--- 221
W + W V + ++ G A + +F W
Sbjct: 188 DEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEFQYWEYLG 247
Query: 222 ----------KAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTS---VIGPNIKHVLKVS 268
++ ++ +E + ++ + +G + V
Sbjct: 248 EWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHDPQTGEVFVTLGTEGSGLPIVP 307
Query: 269 LSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSA-------- 319
+ D + F + D+G Y + A
Sbjct: 308 QVSSIHDMLWAAGEVGVGSEQEGAKVEFSPSMAGFLDWGFSAYAAAGKVLPASSAVSKTS 367
Query: 320 ---KNRRILWGWINESSTRSDNL----KKGWAGLQATPRNLWL---------DKSGRQLM 363
+R + + W+ + ++GW G PR L + + + +
Sbjct: 368 GVEVDRYVSFVWLTGDQYEQADGFPTAQQGWTGSLLLPRELKVQTVENVVDNELVREEGV 427
Query: 364 QWPISE-------IEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAE 416
W + E + L + L V Q + F + K
Sbjct: 428 SWVVGESDNQTATLRTLGITIARETKAALLANGSVTAEEDRTLQTAAVVPFAQSPSSKFF 487
Query: 417 VLDSIW----TNPQFLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSIN 472
VL + + G +LAS E TA++++ + D+S++S
Sbjct: 488 VLTAQLEFPASARSSPLQSGFEILASE--LERTAIYYQFSNES------LVVDRSQTSAA 539
Query: 473 DDNDK-----------TSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARIYP 521
+ + + E L + ++D ++VE + G+ ++
Sbjct: 540 APTNPGLDSFTESGKLRLFDVIENGQEQVETLDLTVVVDNAVVEVY-ANGRFALSTWARS 598
Query: 522 TLAIHDKAHLYAFNNGTEKVNITSLRAW 549
+ + F+NG +V ++
Sbjct: 599 WYD--NSTQIRFFHNGEGEVQFRNVSVS 624
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} Length = 408 | Back alignment and structure |
|---|
Score = 56.0 bits (134), Expect = 1e-08
Identities = 35/236 (14%), Positives = 65/236 (27%), Gaps = 29/236 (12%)
Query: 39 FSSSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQY-----------------K 81
F QP + ++ DP+ + G Y+ +Y
Sbjct: 74 FIQFGPLQPLKGDLAYEEGV-VRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVF 132
Query: 82 LWDTVVWGHSTSTDMVNWTPHDAAIYPSQP--FDANSCWSGSVTILPGGNPAVLYTGIDA 139
WD ++TS D W A+ + +D S ++ + + + Y + +
Sbjct: 133 PWDRCDIWYATSEDGWTWKEEGPAVTRGEKGAYDDRSVFTVEI-MKWEDKYYLCYQTVKS 191
Query: 140 GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVII 199
V +D W K E L + + G +D D +
Sbjct: 192 PYNVRVKNQVGLAWADSPDGPWTKSEEPILSPADNGVWKGEEQDRFAVIKKGDFDSHKVH 251
Query: 200 GSKIN-DTGLAILYRSKDFVNWTKAEQS-------LYSTNQSGMWECPDFFPVSTK 247
I G LY + + + N G + + P+S
Sbjct: 252 DPCIIPYKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPKGPYVKSPYNPISNS 307
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* Length = 374 | Back alignment and structure |
|---|
Score = 51.3 bits (122), Expect = 4e-07
Identities = 17/96 (17%), Positives = 29/96 (30%), Gaps = 20/96 (20%)
Query: 46 QPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQY-----------------KLWDTVVW 88
P + ++ DP+ + YH +Y WD
Sbjct: 36 TPLKGDLAYEEGVIR-RDPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEV 94
Query: 89 GHSTSTDMVNWTPHDAAIYPSQP--FDANSCWSGSV 122
H+TS D + W AI +D + ++ V
Sbjct: 95 WHATSKDKITWKEIGPAIQRGAAGAYDDRAVFTPEV 130
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Length = 404 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 6e-07
Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 30/152 (19%)
Query: 46 QPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQY-----------------KLWDTVVW 88
+P + ++ DP+ + Y+ +Y WD
Sbjct: 76 EPLKGDLAYEEGV-VRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDI 134
Query: 89 GHSTSTDMVNWTPHDAAI--YPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAG----NK 142
++TS D + W A+ +D S ++ V + G + Y + + K
Sbjct: 135 WYATSKDGLTWKEQGIAVKRGEKGAYDDRSVFTPEV-MEWKGKYYLCYQAVKSPYTVRVK 193
Query: 143 QVQNLAVPKNLSDPYLKEWIKPPENPLMVPAD 174
+A + + + P++ P+D
Sbjct: 194 NTIGMACADSPEGLW-----TKTDKPVLEPSD 220
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 49.0 bits (116), Expect = 2e-06
Identities = 27/173 (15%), Positives = 48/173 (27%), Gaps = 25/173 (14%)
Query: 70 YKGIYHFFY-------QYKLWDTVVWGHSTSTDMVNWTPHDAAI-YPSQPFDANSCWSGS 121
Y G Y T G++TSTD ++ + YP W G
Sbjct: 61 YNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQREKTPVFYPDNDSQKELEWPGG 120
Query: 122 -----VTILPGGNPAVLYTGIDAGNKQVQNLAVPKNL-----SDPYLKEWIKPPENPLMV 171
+ + G ++YT + ++ +A +NL P + L
Sbjct: 121 CEDPRIAVTDDGLYVMMYTQWNRHVPRLA-VATSRNLKDWTKHGPAFAKAFDGKFFNLGC 179
Query: 172 PADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAE 224
+ I + K + + S D ++WT
Sbjct: 180 KSGSILTEVVKGKQVIKKVNGKYFMYWGEEHVF------AATSDDLIHWTPIV 226
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 42.8 bits (100), Expect = 2e-04
Identities = 20/147 (13%), Positives = 42/147 (28%), Gaps = 17/147 (11%)
Query: 108 PSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQN------LAVPKNLSDPYLKEW 161
S +++N ++ + L G VLY D + + A + + +
Sbjct: 44 DSIAWESNDTFNPAA-TLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTH-----F 97
Query: 162 IKPPENPLMVPAD----QIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDF 217
+ D PG DP A D ++ ++ + S++
Sbjct: 98 QREKTPVFYPDNDSQKELEWPGGCEDPRIAVTD-DGLYVMMYTQWNRHVPRLAVATSRNL 156
Query: 218 VNWTKAEQSLYSTNQSGMWECPDFFPV 244
+WTK + +
Sbjct: 157 KDWTKHGPAFAKAFDGKFFNLGCKSGS 183
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* Length = 447 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 1e-05
Identities = 31/202 (15%), Positives = 50/202 (24%), Gaps = 37/202 (18%)
Query: 59 SW-MNDPNG-PMIYKGIYHFFYQY---KLWD----TVVWGHSTSTDMVNWTPH------- 102
SW + + +G Y G + F K D + + T + +W
Sbjct: 61 SWPLQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDS 120
Query: 103 -DAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLA-----VPKNLSDP 156
S D WSGS T G + YT + Q L V + S
Sbjct: 121 DKFDANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSL 180
Query: 157 YLKEWIKPPE--------------NPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSK 202
+ D + RDP + V +
Sbjct: 181 NINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHY-VEDKGHKYLVFEANT 239
Query: 203 INDTGLAILYRSKDFVNWTKAE 224
+ G + + K+
Sbjct: 240 GTEDGYQGEESLFNKAYYGKST 261
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Length = 356 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 3e-05
Identities = 31/174 (17%), Positives = 55/174 (31%), Gaps = 19/174 (10%)
Query: 66 GPMIYKGIYHFFY-------QYKLWDTVVWGHSTSTDMVNWTPHD-AAIYPSQPFDANSC 117
IY G Y Q T G++TSTD +++ A YP++ A +
Sbjct: 54 AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFYPAKDNQAENE 113
Query: 118 WSGS-----VTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP 172
G + + G +LYT + ++ +A K+L
Sbjct: 114 CPGGTEDPRIAMTEDGTYVLLYTQWNRKVPRLA-VATSKDLKHWTKFGPAFEKAYNGKFK 172
Query: 173 ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILY--RSKDFVNWTKAE 224
+ S T G ++ + G G +Y S + ++W
Sbjct: 173 DEATKSASLV---TTLKGDKQVIAKVNGKYFMYWGEKNVYAATSDNLIDWDPLL 223
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 | Back alignment and structure |
|---|
Score = 43.5 bits (102), Expect = 1e-04
Identities = 17/133 (12%), Positives = 43/133 (32%), Gaps = 11/133 (8%)
Query: 106 IYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPP 165
I + ++ +V + G ++ + + K+ + W P
Sbjct: 45 IGRNPVPKGARVFNSAV-VPYNGEFVGVFRIDHKNTRPFLHFGRSKDGIN-----WEIEP 98
Query: 166 ENPLMVPAD--QIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKA 223
E V + P DP I + + + + + + + +KDF + +
Sbjct: 99 EEIQWVDVNGEPFQPSYAYDPRVVKI--EDTYYITFCTDDHGPTIG-VGMTKDFKTFVRL 155
Query: 224 EQSLYSTNQSGMW 236
+ N++G+
Sbjct: 156 PNAYVPFNRNGVL 168
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 | Back alignment and structure |
|---|
Score = 41.1 bits (96), Expect = 6e-04
Identities = 23/174 (13%), Positives = 48/174 (27%), Gaps = 19/174 (10%)
Query: 70 YKGIYHFFYQYKLWDTV-VWGHSTSTDMVNWTPHDAAI----YPSQPFDANSCWSGSVTI 124
Y G + ++ +T S D +NW I +PF + + V
Sbjct: 64 YNGEFVGVFRIDHKNTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVK 123
Query: 125 LPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDP 184
+ + + D G + ++ K +++ L + P
Sbjct: 124 IEDT-YYITFCTDDHGP------TIGVGMTK-DFKTFVR-----LPNAYVPFNRNGVLFP 170
Query: 185 TTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWEC 238
+ R + G L S D ++W L ++ +
Sbjct: 171 RKINGKYVMLNR-PSDNGHTPFGDIFLSESPDMIHWGNHRFVLGRSSYNWWENL 223
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* Length = 571 | Back alignment and structure |
|---|
Score = 43.4 bits (101), Expect = 1e-04
Identities = 28/179 (15%), Positives = 43/179 (24%), Gaps = 33/179 (18%)
Query: 70 YKGIYHFFYQY---KLWDT---VVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVT 123
+ G + D +++ D +W P WSGS T
Sbjct: 144 WNGYQLVIGMMGVPNVNDNHIYLLYNKYGDNDFNHWKNAGPIFGLGTPVIQQ--WSGSAT 201
Query: 124 ILPGGNPAVLYTGID--AGNKQVQNLAVPKN----LSDPYLKEWIKPPENPLMVPAD--- 174
+ G+ + YT +D N Q LA D + ++ D
Sbjct: 202 LNKDGSIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGYH 261
Query: 175 ------------QIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWT 221
D + RD + V S TG W
Sbjct: 262 YQTYDQWKETNKGADNIAMRDAHVIDDDNGNRYLVFEAS----TGTENYQGDDQIYQWL 316
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 3e-04
Identities = 37/302 (12%), Positives = 78/302 (25%), Gaps = 74/302 (24%)
Query: 253 DTSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEE-----GSFDDNSGLRYDYG 307
+T K +L V + ++ ++ EE S D SG +
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69
Query: 308 KF--YGSKT---FFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRN-LWLDKSGRQ 361
+ F + + ++ + R+ L+ D +
Sbjct: 70 TLLSKQEEMVQKFVEEVLRIN--YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND--NQV 125
Query: 362 LMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSI 421
++ +S ++ +++ L V I G+
Sbjct: 126 FAKYNVSRLQPY--LKLRQALLELRPAKNVLIDGVLG----------------------- 160
Query: 422 WTNPQFLCPFGLLVLASNGLQEY---TAVFFRIF----KGQDRHIVLMCSDQSRSSINDD 474
G +A + Y + F+IF K + ++ Q D
Sbjct: 161 ---------SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211
Query: 475 NDKT----SYGAFLDLDPVHEKLSI--------RSLI------DRSIVESFGGGGKACIT 516
N + S L + + +L L+ + +F K +T
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLT 271
Query: 517 AR 518
R
Sbjct: 272 TR 273
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 557 | |||
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 100.0 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 100.0 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 100.0 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 100.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 100.0 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 100.0 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 100.0 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 100.0 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 100.0 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 100.0 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 99.97 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 99.97 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.92 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.92 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 99.91 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.91 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.91 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 99.88 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.86 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 99.84 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 99.82 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 99.82 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 99.8 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 99.8 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.8 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 99.78 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 99.69 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.64 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.64 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 99.59 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 99.59 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 99.58 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.58 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 99.57 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.57 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.48 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 99.47 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.39 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 99.37 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 99.26 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 99.09 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 99.03 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 99.0 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 98.98 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 98.65 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 98.53 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 98.38 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 98.33 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 98.23 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 98.22 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 98.16 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 98.14 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 98.03 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 97.98 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 97.97 | |
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 97.94 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 97.91 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 97.88 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 97.81 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 97.79 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 97.78 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 97.68 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 97.68 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 97.6 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 97.55 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 97.41 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 97.34 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 97.15 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 97.1 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 97.07 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 97.06 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 96.75 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 96.5 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 96.41 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 96.08 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 95.76 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 95.24 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 95.21 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 95.11 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 94.42 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 93.98 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 92.98 | |
| 4b1m_A | 185 | Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacil | 92.56 | |
| 4azz_A | 172 | Levanase; hydrolase; 1.70A {Bacillus subtilis} | 89.63 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 89.94 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 89.37 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 89.08 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 88.65 | |
| 3sil_A | 379 | Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1 | 87.53 | |
| 1w0p_A | 781 | Sialidase; hydrolase, neuraminidase, lectin; HET: | 86.51 | |
| 1so7_A | 382 | Sialidase 2; neuraminidase, ganglioside, sugar-ind | 84.2 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 83.71 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 81.81 | |
| 2w20_A | 471 | Sialidase A; secreted, cell WALL, hydrolase, glyco | 80.05 |
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-117 Score=964.25 Aligned_cols=514 Identities=42% Similarity=0.777 Sum_probs=440.1
Q ss_pred CCCCCCcccccccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceE
Q 008686 43 ITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCW 118 (557)
Q Consensus 43 ~~~~~~rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~ 118 (557)
+..+.+||+|||+|+.||||||||++|++|+|||||||+ .||+++||||+|+|||||+++|+||.|+.+||++|||
T Consensus 13 ~~~~~~Rp~yH~~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~DLvhW~~~p~AL~P~~~~D~~G~~ 92 (546)
T 3ugf_A 13 AQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDLIHWLYLPLALAADQWYDMQGVF 92 (546)
T ss_dssp HHHHHTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESSSSSCEECCCCBCSCSGGGTTCEE
T ss_pred hhhhhcCCeEEEeCCCCCccCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCCcCccccCCCCCCCCcccccCCcC
Confidence 334568999999999999999999999999999999999 6899999999999999999999999999999999999
Q ss_pred eeeEEEccCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEE
Q 008686 119 SGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVI 198 (557)
Q Consensus 119 SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~ 198 (557)
||||++.+||+++|||||+.+.+.|.|++|+|+|++|+.|++|+|++.||||.+|+++...+||||+|+|++++|+|+|+
T Consensus 93 SGSavv~~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~fRDPkVvw~~~~g~w~Mv 172 (546)
T 3ugf_A 93 SGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIA 172 (546)
T ss_dssp EEEEEECTTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSCCCBCCCEECSTTCEEEE
T ss_pred cceEEEeeCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCcceeeccceEeECCCCEEEEE
Confidence 99998767999999999998767899999999999999999999998899998888877789999998898778999999
Q ss_pred EeeecCCccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEE
Q 008686 199 IGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYT 278 (557)
Q Consensus 199 ~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~ 278 (557)
+|++.+..|+|++|+|+||++|++.+.++......+||||||||+|+..+.+++++|++|.+.||||+.|.+..+..+|+
T Consensus 173 iGa~~~~~G~vllY~S~DL~~W~~~~~~~~~~~~~gmwECPDlf~l~~~~~~gl~~s~~g~~~k~Vl~~s~~~~~~~~Y~ 252 (546)
T 3ugf_A 173 IGAKYNTTGIAMVYETKDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQRDYYA 252 (546)
T ss_dssp EEEEETTEEEEEEEEESSSSSCEECSSCSEEETTCCCEEEEEEEEEESSCSSCCCTTCCSTTEEEEEEEEETTTTEEEEE
T ss_pred EEEccCCcceEEEEECCCCCCceEcccccccCCCCCeEECCeEEEECCcCccceeecccCCceeEEEEecccCCCceEEE
Confidence 99998778999999999999999998766544445699999999999666678999999888999999998877788999
Q ss_pred EEEEecCCCeEeecCCccCCCCccccccCCCccceeeeeCCCCcEEEEEEecCCCCCCCCCCCCccccccccEEEEEec-
Q 008686 279 IGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDK- 357 (557)
Q Consensus 279 vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~fYA~qt~~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~- 357 (557)
+|+||+.+.+|+|+....|...+.+||+|.|||||||.++++|||||||||++|++..++.+.||+|+|||||||+|++
T Consensus 253 iG~~d~~~~~f~~~~~~~d~g~~~~lD~GdfYA~qtf~d~~~gRril~gWm~~~d~~~~~~~~gW~g~ltlPRel~l~~~ 332 (546)
T 3ugf_A 253 IGTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADREKGWANVQTIPRTVLLDQK 332 (546)
T ss_dssp EEEEETTTTEEEESCGGGCTTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCEEEEECTT
T ss_pred EeeecCCCCeeecCCcccccCccccccCCCccCcceeecCCCCCEEEEEeCCCCCcCCCCcccCccCcceeCEEEEEEeC
Confidence 9999998889999875555445678999999999999997679999999999998766666789999999999999974
Q ss_pred cCCeEEecchHHHHhhhcCccccCCeEecCCceEEecccccceeEEEEEEEecc--cccccccccccC--------CCCc
Q 008686 358 SGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTA--FEKAEVLDSIWT--------NPQF 427 (557)
Q Consensus 358 ~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~--------~~~~ 427 (557)
+|.+|+|+|++||++||.+...+.+..+..+..+.+.+..+.++||+++|+++. .+.....+..+. ....
T Consensus 333 ~g~~L~q~Pv~El~~LR~~~~~~~~~~~~~g~~~~l~~~~~~q~di~~~f~~~~~~l~~~~~~~~~~~c~~~~ga~~~g~ 412 (546)
T 3ugf_A 333 TGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDVGTATQLDIIAEFEIDKEALEGTIEADMGYNCTTSGGAAERGV 412 (546)
T ss_dssp TSSSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCCSCCSEEEEEEEEEECC-----------CCCGGGSCGGGSCBT
T ss_pred CCCEEEEEehHHHHHHhcCcceecceEecCCCeEEecCCCccEEEEEEEEEecccccccccccccccccccccCccccCc
Confidence 345799999999999999988887778888777777777788999999998852 010000011110 0111
Q ss_pred ccceEEEEEEcCCCceeEEEEEEEeeC-CCceEEEEeecCCCCCCCCCCCCCcceeEEeecCCCCeEEEEEEEeCCeEEE
Q 008686 428 LCPFGLLVLASNGLQEYTAVFFRIFKG-QDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVES 506 (557)
Q Consensus 428 ~~~fgl~l~~s~d~~e~t~i~~d~~~~-~~~~~~~~~vDr~rS~~~~~~~~~~~~~~~~~~~~~~~~~LrIfvD~S~vEV 506 (557)
..+|||.|+++++++|+|.|+|++.+. +++..+.+|+||+||++.+++.++.+++.+++ +.+++++||||||+|+||+
T Consensus 413 ~g~fgl~v~a~~~~~E~T~v~f~~~~~~~~~~~~~~~~D~srSs~~~~~~~~~~~~~v~v-~~~~~lsLRilvD~SiVE~ 491 (546)
T 3ugf_A 413 LGPFGLLVSATENLSEQTPVYFYIAKGTDGNFKTFFCLDESRSSKASDVSKQVKGFTVPV-LDGEKFTMRLLVDHSIVES 491 (546)
T ss_dssp TBCEEEEEEECTTCSSCEEEEEEEEC----CCEEEEEEECTTSCSCSSSCCCEEEEECCC-CTTCCEEEEEEEETTEEEE
T ss_pred ccceEEEEEeCCCCceEEEEEEEeeccCCCcceEEEeeccccccCCcCCcccccceEeec-CCCCcEEEEEEEecceeee
Confidence 337999999999999999999998864 34456678999999999888888888888776 3468899999999999999
Q ss_pred EecCCceEEEEEeecCCCcCCceEEEEEecCceeEEEEEEEeeccCccccC
Q 008686 507 FGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557 (557)
Q Consensus 507 FvNdG~~~lTsRiyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~m~~~~~~ 557 (557)
|+||||.++|+||||..+..++++|++|++|+..+.+.+|++|+|++++++
T Consensus 492 F~~~Gr~~iTsrvYP~~~~~~~~~l~~fnn~~~~~~~~sl~~W~m~~~~~~ 542 (546)
T 3ugf_A 492 FAQGGRSCITSRVYPTEAIYGAAKLFLFNNATGASITASLKIWEMNSAFIQ 542 (546)
T ss_dssp EETTTTEEEEEECCCSSSCGGGCEEEEEECCSSCCEEEEEEEEEECCCCCE
T ss_pred eccCCeEEEEEEecCCcccCCCcEEEEEeCCCCceEEEEEEEeccccccCc
Confidence 999999999999999986546789999999875444459999999999874
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-111 Score=929.52 Aligned_cols=516 Identities=62% Similarity=1.159 Sum_probs=437.0
Q ss_pred CCCCCCCCcccccccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCc
Q 008686 41 SSITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANS 116 (557)
Q Consensus 41 ~~~~~~~~rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~g 116 (557)
|+..+++|||+|||+||.||||||||++|++|+||||||++ .||+++||||+|+|||||+++|+||.|+.++|.+|
T Consensus 1 ~~~~~~~~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~G 80 (541)
T 2ac1_A 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDING 80 (541)
T ss_dssp ----CCTTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSBEEEEEEECCCSGGGTTC
T ss_pred CCCcCcccccceeecCccCCeeCCCccEEECCEEEEEEeeCCCCCCCCCcEEEEEECCCccceEECceeecCCCccccCC
Confidence 35678899999999999999999999999999999999999 68999999999999999999999999999999999
Q ss_pred eEeeeEEEccCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecC--CCCCCCCccCCeEEEecCCCe
Q 008686 117 CWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPA--DQIDPGSFRDPTTAWIGPDKI 194 (557)
Q Consensus 117 v~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p--~~~~~~~fRDP~V~~~~~~g~ 194 (557)
||||||++.++|+++|||||+.....+.|++|+|+|++|++|.+|+|++.+|||.+| +++...+||||+|+|++++|+
T Consensus 81 ~~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~~~~~~~~~fRDP~vvw~~~~g~ 160 (541)
T 2ac1_A 81 CWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKK 160 (541)
T ss_dssp EEEEEEEECTTSCEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTTCCCTTSEECCCCCEECTTSC
T ss_pred EEcceEEEeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCceeEEecCCCcEEcCCCCCCCCCCceECCeEEeEeCCCe
Confidence 999999886699999999997655689999999999999989999999889999877 776678999999779866899
Q ss_pred EEEEEeeecCCccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCc---eeEEEEEeecC
Q 008686 195 WRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPN---IKHVLKVSLSN 271 (557)
Q Consensus 195 ~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~---~~~vl~~s~~~ 271 (557)
|||++|++.+..|++++|+|+||++|++.+.++.....++||||||||+|+..|.+++++|++|.+ .||||..|.++
T Consensus 161 w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~~~~vl~~s~~~ 240 (541)
T 2ac1_A 161 WRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 240 (541)
T ss_dssp EEEEEEEEETTEEEEEEEEESSSSSCEECSSCSEEEETSCCEEEEEEEEEESSCSCCCCTTCCCBTTBCEEEEEEEEETT
T ss_pred EEEEEEEecCCceEEEEEECCCCCCcEEcccccccCCCCCcccCCcEEEECCCCcceeEecCCCCCcccceeEEEeeecC
Confidence 999999988778999999999999999988777654556899999999999777788999998765 69999999887
Q ss_pred CceeEEEEEEEecCCCeEeecCCccCCCCccccccCCCccceeeeeCCCCcEEEEEEecCCCCCCCCCCCCccccccccE
Q 008686 272 YQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPR 351 (557)
Q Consensus 272 ~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~fYA~qt~~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPR 351 (557)
...+.|++|+||..+.+|+|+..+.+...+++||+|.|||||||.++++||||+||||+++++..++.+.||+|+|||||
T Consensus 241 ~~~~~Y~~G~~d~~~~~f~~~~~~~~~~~~~~lD~GdfYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPR 320 (541)
T 2ac1_A 241 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPR 320 (541)
T ss_dssp TTEEEEEEEEEETTTTEEEECTTCCSSTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCSSCHHHHHHHTEECEECCCE
T ss_pred CcceEEEEEEEecCCCeEeeCCccccccceeeecCCCcccccEEecCCCCCEEEEEEeCCCCcCCCCCCCCcccccccCE
Confidence 78899999999987789999876555444679999999999999997569999999999998755556789999999999
Q ss_pred EEEEeccCCeEEecchHHHHhhhcCcc-ccCCeEecCCceEEecccccceeEEEEEEEecccccccccccccCCCCc---
Q 008686 352 NLWLDKSGRQLMQWPISEIEKLRGNQV-KWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQF--- 427 (557)
Q Consensus 352 eL~l~~~g~~L~q~Pv~el~~LR~~~~-~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--- 427 (557)
||+|+++|.+|+|+|++||++||.+.. .+.+..+..+..+.+.+..+.++|++++|++...+.++.++++|.++..
T Consensus 321 el~l~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (541)
T 2ac1_A 321 KIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICS 400 (541)
T ss_dssp EEEECTTSSSEEEEECGGGGGGBCSSCEEEEEEEECTTEEEECCSSCTTEEEEEEEEECSCGGGSEECCTTCCCHHHHHH
T ss_pred EEEEEcCCCEEEEeeHHHHHHhhccccccccceEecCCceeEecCCccceeeeEEEEecccccccccccccccccccccc
Confidence 999976775699999999999999876 6666666656556666666778899999987643333334433322111
Q ss_pred ---------ccceEEEEEEcCCCceeEEEEEEEeeC-C--CceEEEEeecCCCCCCCCCCCCCcceeEEeecCCCCeEEE
Q 008686 428 ---------LCPFGLLVLASNGLQEYTAVFFRIFKG-Q--DRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSI 495 (557)
Q Consensus 428 ---------~~~fgl~l~~s~d~~e~t~i~~d~~~~-~--~~~~~~~~vDr~rS~~~~~~~~~~~~~~~~~~~~~~~~~L 495 (557)
...|||.|+++++++|.|.|+|++.+. + ++.++++|+||+||+......++.+++.+++++ +++++|
T Consensus 401 ~~g~~~~~~~~~fgl~~~~~~~~~e~t~i~~~~~~~~~~~~~~~~~~~~Dr~rs~~~~~~~~~~~~~~~~~~~-~~~~~L 479 (541)
T 2ac1_A 401 KMNVSVKSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSL 479 (541)
T ss_dssp HTCTTSCCSEEEEEEEEEECTTSSSCEEEEEEEEESSTTCSCEEEEEEEECTTSCSCTTSCCCCEEEEECCCT-TSCEEE
T ss_pred ccccccccCccceEEEEEccCCCcccEEEEEEeccCcccCCceEEEEEeecCccCccccccccccceEEEecC-CCceEE
Confidence 136999999998888999999998865 3 455566899999998765555555666666644 578999
Q ss_pred EEEEeCCeEEEEecCCceEEEEEeecCCCcCCceEEEEEecCceeEEEEEEEeeccCccccC
Q 008686 496 RSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557 (557)
Q Consensus 496 rIfvD~S~vEVFvNdG~~~lTsRiyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~m~~~~~~ 557 (557)
|||||+|+||||+||||.|||+||||..+..++.+|.+|++|++.+++.++++|+|+++++|
T Consensus 480 ri~vD~S~vEvF~n~G~~~~Tsrvyp~~~~~~~~~~~~~~~g~~~~~~~~~~~w~l~~~~~~ 541 (541)
T 2ac1_A 480 RALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 541 (541)
T ss_dssp EEEEETTEEEEEETTTTEEEEEECCCSSSCGGGCEEEEEECSSSCEEEEEEEEEEBCCCCBC
T ss_pred EEEEeCCEEEEEECCCEEEEEEEeeCCCccCCcceEEEEeCCCceEEEEEEEEEecceeecC
Confidence 99999999999999999999999999875334678888988766788889999999999986
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-110 Score=919.89 Aligned_cols=512 Identities=55% Similarity=1.085 Sum_probs=435.8
Q ss_pred CCCCCcccccccCCCCCccCCcceEEECCEEEEEEEEe----cCCC-eEEEEEEeCCCCcceecCCCCCCCCCcCCCceE
Q 008686 44 TSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDT-VVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCW 118 (557)
Q Consensus 44 ~~~~~rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~-~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~ 118 (557)
.+++|||+|||+||.||||||||++|++|+||||||++ .||+ ++||||+|+|||||+++|+||.|+.++|.+|||
T Consensus 3 ~~~~~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFYQ~~P~~~~~g~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~Gv~ 82 (543)
T 1st8_A 3 IEQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWIHLDPAIYPTQEADSKSCW 82 (543)
T ss_dssp CSSTTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSCCSCCEEEEEEESSSSSEEECCCSBCCCSGGGTTEEE
T ss_pred cCccccccccccCCcCCeECCcccEEECCEEEEEEeeCCCCCCCCCccEEEEEECCCccceEECCeeccCCCccccCCEE
Confidence 46789999999999999999999999999999999999 6888 999999999999999999999999999999999
Q ss_pred eeeEEEccCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEE
Q 008686 119 SGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVI 198 (557)
Q Consensus 119 SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~ 198 (557)
||||++.++|+++|||||.+....+.||+|+|+|++||+|.+|+|++.||||.+|+++...+||||+|+|++++|+|||+
T Consensus 83 SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~g~~~~~fRDP~vvw~~~~g~w~mv 162 (543)
T 1st8_A 83 SGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIV 162 (543)
T ss_dssp EEEEEEETTTEEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTCCTTSEECCCCCEECTTSCEEEE
T ss_pred cceEEEeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCcceeEEcCCCcEEeCCCCCCcCccCCCeEEEECCCCcEEEE
Confidence 99998766999999999965556899999999999999999999998899998777777789999997798678999999
Q ss_pred EeeecCCccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEE
Q 008686 199 IGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYT 278 (557)
Q Consensus 199 ~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~ 278 (557)
+|++.+..|++++|+|+||++|++.+.++.....++||||||||+|+..|.+++++|++|.+.||||++|. ...+.|+
T Consensus 163 ~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~vl~~s~--~~~~~Y~ 240 (543)
T 1st8_A 163 VGGDRDNNGMAFLYQSTDFVNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDWYT 240 (543)
T ss_dssp EEEEETTEEEEEEEEESSSSSCEECSSCSEEETTCCCCEEEEEEEEETTCSCCCCTTCCSTTEEEEEEEEE--TTEEEEE
T ss_pred EEEecCCceEEEEEECCCCCCcEECccccccCCCCCceeCCcEEEECCCCccceEecCCCCCceEEEEecc--CCccEEE
Confidence 99988778999999999999999988777654456899999999999878789999999888899999987 5678999
Q ss_pred EEEEecCCCeEeecCCcc--CCCCccccccCCCccceeeeeCCCCcEEEEEEecCCCCCCCCCCCCccccccccEEEEEe
Q 008686 279 IGTYNITTDTYIAEEGSF--DDNSGLRYDYGKFYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLD 356 (557)
Q Consensus 279 vG~~d~~~~~F~~~~~~~--~~~~~~~lD~G~fYA~qt~~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~ 356 (557)
+|+||..+.+|+|+..+. |...+.+||+|.|||||||.++++||||+||||+++++..++.+.||+|+|||||||+|+
T Consensus 241 iG~~d~~~~~f~~~~~~~~~d~~~~~~lD~GdfYA~qtf~~~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPRel~l~ 320 (543)
T 1st8_A 241 IGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEKGWAGLQSFPRALWID 320 (543)
T ss_dssp EEEEETTTTEEEETTCCCCCSSTTSEESBSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCEEEEEC
T ss_pred EEEEeCCCCeEeeCCccccccccceeeccCCCcccccEeecCCCCCEEEEEecCCCCcCCCCCCCCccceeeeCEEEEEE
Confidence 999998778999976543 333356899999999999999756999999999999876556678999999999999997
Q ss_pred ccCCeEEecchHHHHhhhcCccccCCeEecCCceEEecccccceeEEEEEEEecccccccccccccCCC-----------
Q 008686 357 KSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNP----------- 425 (557)
Q Consensus 357 ~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----------- 425 (557)
++|.+|+|+|++||++||.+.+.+.+..+..+..+.+.+..+.+++++++|++...+.++.++++|.++
T Consensus 321 ~~g~~L~q~Pv~El~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (543)
T 1st8_A 321 RNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASS 400 (543)
T ss_dssp TTSSSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCSSCTTEEEEEEEEEECCGGGSEECCCSSCCHHHHHHHSCTTS
T ss_pred eCCCEEEEeEhHHHHHhhcCcccceeEEecCCceEEecccccceeeEEEEEeeccccccccccccccccccccccccccc
Confidence 677569999999999999987766666666565566666677889999999886333334444433211
Q ss_pred -CcccceEEEEEEcCCCceeEEEEEEEeeC-CCceEEEEeecCCCCCCCCCCCCCcceeEEeecCCCCeEEEEEEEeCCe
Q 008686 426 -QFLCPFGLLVLASNGLQEYTAVFFRIFKG-QDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSI 503 (557)
Q Consensus 426 -~~~~~fgl~l~~s~d~~e~t~i~~d~~~~-~~~~~~~~~vDr~rS~~~~~~~~~~~~~~~~~~~~~~~~~LrIfvD~S~ 503 (557)
.....|||.|+++++++|.|.|+|++.+. +++.++++|+||+||+......++.+++.+++++.++.++||||||+|+
T Consensus 401 ~~~~~~fgl~~~~~~~~~e~t~i~~~~~~~~~~~~~~~~~~Dr~rs~~~~~~~~~~~~~~~~~~~~~~~~~LrI~vD~Ss 480 (543)
T 1st8_A 401 RGALGPFGLLAMASKDLKEQSAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDHSI 480 (543)
T ss_dssp CCSSCCEEEEEEECTTSSSCEEEEEEEEECTTSCEEEEEEEECTTSCSCSSCCCCCEEEEECCCTTTSCEEEEEEEETTE
T ss_pred cccccceEEEEEccCCCcccEEEEEEeecccCCeEEEEEEecccccCccccccccccceEEEEeccCCeEEEEEEEeCCE
Confidence 11247999999998888999999998875 4465667899999998765555556666666654567899999999999
Q ss_pred EEEEecCCceEEEEEeecCCCcCCceEEEEEecCceeEEEEEEEeeccCccccC
Q 008686 504 VESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQIN 557 (557)
Q Consensus 504 vEVFvNdG~~~lTsRiyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~m~~~~~~ 557 (557)
||||+||||.|||+||||.....++.+|.++++|++.+++.++++|+|+++++|
T Consensus 481 vEvF~n~G~~~~TsRvyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~l~~~~~~ 534 (543)
T 1st8_A 481 IESFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAKFV 534 (543)
T ss_dssp EEEEEGGGTEEEEEECCCSGGGTSCCEEEEEECSSSCEEEEEEEEEEECCCCEE
T ss_pred EEEEECCCEEEEEEEeecCCccCCcceEEEEeCCCceEEEEEEEEEechhheec
Confidence 999999999999999999875334678998888766788889999999999874
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-101 Score=839.89 Aligned_cols=456 Identities=27% Similarity=0.468 Sum_probs=370.4
Q ss_pred CCCCCcccccccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEe
Q 008686 44 TSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWS 119 (557)
Q Consensus 44 ~~~~~rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~S 119 (557)
.+++|||+|||+||.||||||||++|++|+|||||||+ .||+++||||+|+|||||+++|+||.|+.++|.+||||
T Consensus 35 ~~~~~Rp~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DLvhW~~~~~aL~P~~~~d~~g~~S 114 (526)
T 3pij_A 35 RNNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPIMFAPSLEQEKDGVFS 114 (526)
T ss_dssp CCCSSCCSSSCBCSSEEEEEEEEEEEETTEEEEEEEEETTCSSSCSBEEEEEEESSSSSEEECCCCBCCCBGGGTTEEEE
T ss_pred cCCCccccEeEeCCcCCeeCCeEEEEECCEEEEEEEcCCCCCCcCCcEEEEEEeCCCCCceeCeeccCCCCccccCCeEe
Confidence 46789999999999999999999999999999999999 68999999999999999999999999999999999999
Q ss_pred eeEEEccCCeEEEEEeeecC--------CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecC
Q 008686 120 GSVTILPGGNPAVLYTGIDA--------GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGP 191 (557)
Q Consensus 120 Gsav~~~dg~~~l~YTg~~~--------~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~ 191 (557)
|||+++.||+++|||||+.+ ...|.|++|+|+|++ |++|+|+ .|||..|+.....+||||+| |+ +
T Consensus 115 GSav~~~dg~~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~g---l~~w~K~--~pvi~~P~~~~~~~fRDP~V-~~-~ 187 (526)
T 3pij_A 115 GSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDE---LTSATKQ--GMIIDCPTDKVDHHYRDPKV-WK-T 187 (526)
T ss_dssp EEEEECTTSCEEEEEEEEEETTSSSGGGCEEEEEEEEEESSTT---CSCEEEE--EEEECCCGGGEEEEEEEEEE-EE-E
T ss_pred ceEEEccCCEEEEEEecccCcccccCCCCceeEEEEEEECCCC---cceEEEC--CccccCCCCccccccccCEE-EE-E
Confidence 99998768899999999852 124889999999864 5899997 38886554445679999996 55 6
Q ss_pred CCeEEEEEeeec-CCccEEEEEEeCCCCCCEEccccccc-CCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEee
Q 008686 192 DKIWRVIIGSKI-NDTGLAILYRSKDFVNWTKAEQSLYS-TNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSL 269 (557)
Q Consensus 192 ~g~~~m~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~~~~-~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~ 269 (557)
+|+|||++|++. +..|+|++|+|+||++|++.+.++.. ...++||||||||+|+ |.+ ++.||||++|+
T Consensus 188 ~g~w~mv~ga~~~~~~G~i~ly~S~Dl~~W~~~g~l~~~~~~~g~mwECPdlf~l~--~~~--------g~~k~vL~~s~ 257 (526)
T 3pij_A 188 GDTWYMTFGVSSADKRGQMWLFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIK--DKD--------GNEKWVIGFSA 257 (526)
T ss_dssp TTEEEEEEEEEETTSCEEEEEEEESSSSSCEEEEEEEECSCTTCCEEEEEEEEEEE--CTT--------SCEEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCcEEEEEECCCCCcceEcCcccccCCCccCeEECCEEEEEC--CCC--------CceeEEEEEec
Confidence 899999999876 66899999999999999999864433 3457899999999998 321 24699999886
Q ss_pred cC----------CceeEEEEEEEecCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCCCCC
Q 008686 270 SN----------YQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTRSDN 338 (557)
Q Consensus 270 ~~----------~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~~~~ 338 (557)
.+ ...+.|++|+||. +.+|+|+.. +++||+|+ |||||||. + +||||+||||++|++..+.
T Consensus 258 ~g~~~~~~~~~~~~~~~Y~vG~~d~-~~~f~~~~~------~~~lD~G~dfYA~qtf~-~-~gRri~~gW~~~~~~~~~~ 328 (526)
T 3pij_A 258 MGSKPSGFMNRNVSNAGYMIGTWEP-GGEFKPETE------FRLWDCGHNYYAPQSFN-V-DGRQIVYGWMSPFVQPIPM 328 (526)
T ss_dssp ESCCCBTTBSCSSSEEEEEEEEECT-TSCEEESSC------CEESCCSSSCEEEEEEE-E-TTEEEEEEEECCCSSCCGG
T ss_pred cccCCCccccccccceeEEEEEEcC-CCcEEECCc------ceeeeeCCCccccceeC-C-CCCEEEEEecCCCcccCCC
Confidence 43 2467999999994 258998753 57899999 99999998 4 7999999999999987777
Q ss_pred CCCCccccccccEEEEEeccCCeEEecchHHHHhhhcCccccCCeEecCCceEEecccccceeEEEEEEEeccccccccc
Q 008686 339 LKKGWAGLQATPRNLWLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVL 418 (557)
Q Consensus 339 ~~~gW~g~ltlPReL~l~~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~ 418 (557)
.+.||+|+|||||||+|+++| +|+|+|++||++||.+.+.+.+..+..+....+.. .+.+++|+++|++...
T Consensus 329 ~~~gW~g~ltlPRel~l~~~g-~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~-~~~~~el~~~~~~~~~------ 400 (526)
T 3pij_A 329 EDDGWCGQLTLPREITLGDDG-DVVTAPVAEMEGLREDTLDHGSVTLDMDGEQIIAD-DAEAVEIEMTIDLAAS------ 400 (526)
T ss_dssp GGGTEECEECCCEEEEECTTS-SEEEEECGGGGGGBSCCEEEEEEEECSSEEEEEES-CCSSEEEEEEEETTTC------
T ss_pred CCCCccceEEeCEEEEEEeCC-cEEEeecHHHHHhhhCcccccceEeccCCceEecC-CCcEEEEEEEEEECCC------
Confidence 789999999999999998777 69999999999999987766555554433333332 3567888888876421
Q ss_pred ccccCCCCcccceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCCCCCCcceeEE--eecCCCCeEEEE
Q 008686 419 DSIWTNPQFLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFL--DLDPVHEKLSIR 496 (557)
Q Consensus 419 ~~~~~~~~~~~~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~~~~~~~~~~~--~~~~~~~~~~Lr 496 (557)
....|||.|+++.++ |.|.|+|+... +. +++||++|+... ..++... ++.+.++.++||
T Consensus 401 --------~~~~~gl~l~~~~~~-e~t~i~yd~~~---~~---l~~DR~~s~~~~----~~~~~~~~~~~~~~~~~~~Lr 461 (526)
T 3pij_A 401 --------TAERAGLKIHATEDG-AYTYVAYDGQI---GR---VVVDRQAMANGD----RGYRAAPLTDAELASGKLDLR 461 (526)
T ss_dssp --------CCSEEEEEEEECTTS-CCEEEEEETTT---TE---EEEECTTCSSSC----CCEEEEECCHHHHHHSEEEEE
T ss_pred --------CcceEEEEEEECCCC-cEEEEEEEeCC---CE---EEEECCCCCCCC----CccceEEEeeecCCCCcEEEE
Confidence 123699999887775 88999998542 32 357999997542 1222211 111224689999
Q ss_pred EEEeCCeEEEEecCCceEEEEEeecCCCcCCceEEEEEecCceeEEEEEEEeeccCcccc
Q 008686 497 SLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQI 556 (557)
Q Consensus 497 IfvD~S~vEVFvNdG~~~lTsRiyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~m~~~~~ 556 (557)
||||+|+||||+||||.|||+||||... ..+|.++++++ .+++.+|++|+|+++..
T Consensus 462 I~vD~SsvEvF~n~G~~v~Tsrvyp~~~---~~~i~l~a~gg-~~~~~~l~~~~l~~~~~ 517 (526)
T 3pij_A 462 VFVDRGSVEVYVNGGHQVLSSYSYASEG---PRAIKLVAESG-SLKVDSLKLHHMKSIGL 517 (526)
T ss_dssp EEECSSEEEEEETTTTEEEEEECCCCSS---CCEEEEEEESS-CEEEEEEEEEEBCCCSS
T ss_pred EEEeCCEEEEEECCCeEEEEEEEcCCCC---CceEEEEEcCC-eEEEEEEEEEecccchh
Confidence 9999999999999999999999999865 34666676654 57889999999999875
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-98 Score=818.08 Aligned_cols=463 Identities=24% Similarity=0.447 Sum_probs=365.9
Q ss_pred CCCCCcccccccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCC----CCCCCcCCC
Q 008686 44 TSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAI----YPSQPFDAN 115 (557)
Q Consensus 44 ~~~~~rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL----~P~~~~d~~ 115 (557)
++++|||+|||+||.||||||||++|++|+||||||++ .||+++||||+|+|||||+++|+|| .|+ +|.+
T Consensus 3 ~~~~~Rp~~H~~P~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~wg~~~WgHa~S~Dlv~W~~~~~al~~~g~P~--~d~~ 80 (518)
T 1y4w_A 3 YDQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGS--DVTE 80 (518)
T ss_dssp CCCTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSCEEEEEEECCBTTTS--CCCB
T ss_pred CCCCccccEeeeCCcCceECCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCccEEECCceEecCCCCC--CCCC
Confidence 56889999999999999999999999999999999999 6899999999999999999999999 665 5778
Q ss_pred ceEeeeEEEccCC----------eEEEEEeeecCC------------CcceEEEEEEcCCCCCccceeecC-CCCceEec
Q 008686 116 SCWSGSVTILPGG----------NPAVLYTGIDAG------------NKQVQNLAVPKNLSDPYLKEWIKP-PENPLMVP 172 (557)
Q Consensus 116 gv~SGsav~~~dg----------~~~l~YTg~~~~------------~~~~q~lA~s~d~~d~~l~~w~k~-~~~Pvi~~ 172 (557)
|||||||+++++| +++|||||+.+. +.|.|++|+|+|++ .+|+|+ +.+|||.+
T Consensus 81 g~~SGsav~~~~~~~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g----~~w~k~~~~~pvi~~ 156 (518)
T 1y4w_A 81 MYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPN 156 (518)
T ss_dssp EEEEEEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCS
T ss_pred ceEeeeEEEcCCCccccccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCC----ceEEEcCCCCCeEec
Confidence 9999999987554 899999998642 24899999999853 799998 77999976
Q ss_pred CCC---CCCCCccCCeEEEecCCCeEEEE--EeeecCCccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEecCC
Q 008686 173 ADQ---IDPGSFRDPTTAWIGPDKIWRVI--IGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTK 247 (557)
Q Consensus 173 p~~---~~~~~fRDP~V~~~~~~g~~~m~--~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~ 247 (557)
++. ....+||||+|+|.+++|+|||+ +|++ .+|++|+|+||++|++.+.+......++||||||||+|..+
T Consensus 157 ~~~~y~~~~~~fRDP~V~~~~~~g~w~mv~~~g~~----~~i~ly~S~DL~~W~~~~~~~~~~~~~~mwECPdlf~l~~~ 232 (518)
T 1y4w_A 157 PPSPYEAEYQNFRDPFVFWHDESQKWVVVTSIAEL----HKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLD 232 (518)
T ss_dssp CCTTCGGGTTSEEEEEEEEETTTTEEEEEEEEGGG----TEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEBT
T ss_pred CCcccccCCCCcCCCcEeEECCCCcEEEEEEecCC----CeEEEEECCCCCCCeECccccccCCCCCeEECCeEEEeecC
Confidence 543 24689999998777567999999 6654 26999999999999999865443345789999999999543
Q ss_pred CCCCeeecccCCceeEEEEEeecC-------CceeEEEEEEEecCCCeEeecCCcc--CCCCccccccCC-Cccceeeee
Q 008686 248 SPKGVDTSVIGPNIKHVLKVSLSN-------YQQDYYTIGTYNITTDTYIAEEGSF--DDNSGLRYDYGK-FYGSKTFFD 317 (557)
Q Consensus 248 g~~~~~~~~~~~~~~~vl~~s~~~-------~~~~~Y~vG~~d~~~~~F~~~~~~~--~~~~~~~lD~G~-fYA~qt~~d 317 (557)
|. .+.||||++|.+. ...+.|++|+||+. +|+|+.... ....+++||+|+ |||||||.+
T Consensus 233 g~---------~~~k~vL~~s~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~d 301 (518)
T 1y4w_A 233 SG---------NSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYNG 301 (518)
T ss_dssp TS---------SCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECBS
T ss_pred CC---------CceeEEEEeccCCCCccccccCCcEEEEEEeeCC--EEEeCCcccccccccceEEccCCCCcccccccc
Confidence 41 2359999999754 24689999999974 799875211 012367999998 999999998
Q ss_pred CCCCcEEEEEEecCCCCCCCCCCCCccccccccEEEEEec-cC-CeEEecchHHHHhhhcCccccCCeEecCCceEEecc
Q 008686 318 SAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDK-SG-RQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITG 395 (557)
Q Consensus 318 ~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~-~g-~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~l~~ 395 (557)
.++||||+||||++|++....++.+|+|+|||||||+|++ +| .+|+|+|++||++||.+...+.+..+..+....+..
T Consensus 302 ~~~gRri~~gWm~~~~~~~~~pt~gW~g~ltlPRel~l~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~~~~~~~ 381 (518)
T 1y4w_A 302 LSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQPQEAWSSISNKRPIYSRTFKTLSEGSTNTT 381 (518)
T ss_dssp CCGGGCEEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEECSCGGGTBCSSCSEEEEEEEECSEECCCE
T ss_pred CCCCCEEEEEecCCCccccccCCCCcCcccccCeEEEEEecCCcCeEEEeehHHHHhhhccceeccceeeccccceeecC
Confidence 5479999999999998754444579999999999999985 33 389999999999999987655444443332223333
Q ss_pred cccceeEEEEEEE-ecccccccccccccCCCCcccceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCC
Q 008686 396 ITAAQADVEISFQ-TTAFEKAEVLDSIWTNPQFLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDD 474 (557)
Q Consensus 396 ~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~ 474 (557)
..+.+++|+++|+ .. ....|||.|+++.+++|.|.|+|+..+ +. +++||++|+...
T Consensus 382 ~~~~~~el~~~~~~~~----------------~~~~~gl~l~~~~~~~e~~~i~~~~~~---~~---l~~dr~~s~~~~- 438 (518)
T 1y4w_A 382 TTGETFKVDLSFSAKS----------------KASTFAIALRASANFTEQTLVGYDFAK---QQ---IFLDRTHSGDVS- 438 (518)
T ss_dssp ECCSSEEEEEEEETTC----------------SSSEEEEEEEECTTSSSCEEEEEETTT---TE---EEEECTTSSCCT-
T ss_pred CCCeEEEEEEEEecCC----------------CCccEEEEEEcCCCCceeEEEEEEecC---CE---EEEecCCCCCCc-
Confidence 4456778877775 21 123699999988887889999998643 22 578999997531
Q ss_pred CCCCccee--EEee-cCCCCeEEEEEEEeCCeEEEEecCCceEEEEEeecCCCcCCceEEEEEecCceeEEEEEEEeecc
Q 008686 475 NDKTSYGA--FLDL-DPVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSM 551 (557)
Q Consensus 475 ~~~~~~~~--~~~~-~~~~~~~~LrIfvD~S~vEVFvNdG~~~lTsRiyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~m 551 (557)
. ...+++ ..++ ...++.++||||||+|+||||+||||.|||+||||... ..+|.+++++ +.+++.++++|+|
T Consensus 439 ~-~~~~~~~~~~~~~~~~~~~~~lri~vD~SsvEvF~n~G~~~~T~rvyp~~~---~~~i~~~~~~-g~~~~~~~~~~~l 513 (518)
T 1y4w_A 439 F-DETFASVYHGPLTPDSTGVVKLSIFVDRSSVEVFGGQGETTLTAQIFPSSD---AVHARLASTG-GTTEDVRADIYKI 513 (518)
T ss_dssp T-CTTTSCEEEEECCCCTTSEEEEEEEEETTEEEEEETTTTEEEEEECCCCTT---CCEEEEEEES-SCEEEEEEEEEEB
T ss_pred c-cCcccceEEEEeecCCCCeEEEEEEEeCCEEEEEECCCEEEEEEEecCCCC---CCEEEEEECC-CeEEEEEEEEEec
Confidence 1 122222 2344 22357899999999999999999999999999999864 4677777765 4678889999999
Q ss_pred Cccc
Q 008686 552 KKAQ 555 (557)
Q Consensus 552 ~~~~ 555 (557)
+||.
T Consensus 514 ~s~w 517 (518)
T 1y4w_A 514 ASTW 517 (518)
T ss_dssp CCCC
T ss_pred cccc
Confidence 9973
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-97 Score=810.94 Aligned_cols=452 Identities=25% Similarity=0.444 Sum_probs=355.2
Q ss_pred CCCCCCcccccccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCce-
Q 008686 43 ITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSC- 117 (557)
Q Consensus 43 ~~~~~~rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv- 117 (557)
+.+++|||+|||+||.||||||||++|++|+|||||||+ .||+|+||||+|+|||||+++|+|| | |.+||
T Consensus 23 ~~~~~~Rp~yH~~P~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DLvhW~~~~~aL-~----d~~g~~ 97 (516)
T 3sc7_X 23 AQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTDLMHWAHKPTAI-A----DENGVE 97 (516)
T ss_dssp -CCSTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTCSTTCCCEEEEEEESSSSSCEEEEEEE-C----CBTTEE
T ss_pred hcCCCccccEeecCCcCCcCCCeeeEEECCEEEEEEeCCCCCCccCCCEEEEEEeCCCCcceecCccc-c----CCCCce
Confidence 567899999999999999999999999999999999999 6899999999999999999999999 4 34565
Q ss_pred -EeeeEEEccCC----------eEEEEEeeecC-CCcceEEEEEEcCCCCCccceeecCCCCceEecCC----CCC-CCC
Q 008686 118 -WSGSVTILPGG----------NPAVLYTGIDA-GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPAD----QID-PGS 180 (557)
Q Consensus 118 -~SGsav~~~dg----------~~~l~YTg~~~-~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~----~~~-~~~ 180 (557)
|||||++++++ .++|||||+.+ .+.|.|++|+|+|.+ ++|+|++.||||.+++ ++. ..+
T Consensus 98 ~~SGSav~~~~~~~g~~~~~~~~l~l~YTg~~~~~~~q~q~lA~s~D~g----~~w~k~~~nPVi~~~~~~~~~~~~~~~ 173 (516)
T 3sc7_X 98 AFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLE 173 (516)
T ss_dssp EEEEEEEECTTCTTSSSCSSSCCEEEEEEEEETTTTEEEEEEEEESSTT----SCCEECTTCCSBCHHHHTTTCTTSSSS
T ss_pred eEeceEEEeCCcccccccCCCCeEEEEEeeeeCCCCceEEEEEEecCCC----ceEEEcCCCceEcCCCcccccccCCCc
Confidence 99999987543 49999999865 357999999999864 7999998899996432 221 247
Q ss_pred ccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccccccCCC-----CCceeecceEEecCCCCCCeeec
Q 008686 181 FRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQ-----SGMWECPDFFPVSTKSPKGVDTS 255 (557)
Q Consensus 181 fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~-----~~~~ECPdlf~l~~~g~~~~~~~ 255 (557)
||||+|+|.+++|+|+|++|++ ..|+|++|+|+||++|++.+.+...... ++||||||||+|+.+|.
T Consensus 174 fRDPkV~~~~~~g~w~mv~g~~--~~~~i~ly~S~DL~~W~~~~~l~~~~~~g~~~~~~mwECPdlf~l~~~g~------ 245 (516)
T 3sc7_X 174 SRDPKVFFHRQSGNWIMVLAHG--GQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELPVEGT------ 245 (516)
T ss_dssp CEEEEEEEETTTTEEEEEEECB--TTCEEEEEEESSSSSCEEEEEEEGGGSTTCCTTCCCBCCCEEEEEECSSS------
T ss_pred ccCCeEEEECCCCeEEEEEEEC--CCCEEEEEECCCCCCceEcccccccCCCCcccccceEECCcEEEecccCC------
Confidence 9999988876789999999864 3468999999999999999865433222 26999999999985442
Q ss_pred ccCCceeEEEEEeecC-----CceeEEEEEEEecCCCeEeecCCccCCCCccccccCC-Cccceeeee--CCCCcEEEEE
Q 008686 256 VIGPNIKHVLKVSLSN-----YQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFD--SAKNRRILWG 327 (557)
Q Consensus 256 ~~~~~~~~vl~~s~~~-----~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d--~~~gr~i~~g 327 (557)
.+.||||++|++. ...+.|++|+||+. +|+++... ...++||+|+ |||||||.+ .++||||+|+
T Consensus 246 ---~~~k~VL~~s~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~---~~~~~lD~G~DfYA~qtf~~~~~~~gRri~w~ 317 (516)
T 3sc7_X 246 ---EETTWVVMMTPAEGSPAGGNGVLAITGSFDGK--SFTADPVD---ASTMWLDNGRDFDGALSWVNVPASDGRRIIAA 317 (516)
T ss_dssp ---SCEEEEEEECCSSCCTTSSSCCEEEEEEECSS--CEEECCCC---TTTSBSCSSSSCEEEEECBSCCTTTCCCEEEE
T ss_pred ---CCceEEEEECCCCCCCCCCCceEEEEEEccCC--eeEeCCCC---ccceeEEcCCCccccccccCCcCCCCCEEEEE
Confidence 2359999999853 24678999999975 68875321 1256899999 999999974 2368999999
Q ss_pred EecCCCCCCCCCCCCccccccccEEEEEec-cC-CeEEecchHHHHhhhcCccccCCeEecCCceEEecccccceeEEEE
Q 008686 328 WINESSTRSDNLKKGWAGLQATPRNLWLDK-SG-RQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEI 405 (557)
Q Consensus 328 W~~~~~~~~~~~~~gW~g~ltlPReL~l~~-~g-~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~ 405 (557)
||++++... ++.+|+|+|||||||+|++ +| .+|+|+|++||++||.+...+.+..+..+.. .+.+..+.++||++
T Consensus 318 w~~~~~~~~--pt~gW~g~ltlPRel~l~~~~~~~~L~q~Pv~El~~Lr~~~~~~~~~~~~~~~~-~l~~~~~~~~el~~ 394 (516)
T 3sc7_X 318 VMNSYGSNP--PTTTWKGMLSFPRTLSLKKVGTQQHFVQQPITELDTISTSLQILANQTITPGQT-LLSSIRGTALDVRV 394 (516)
T ss_dssp EECCSTTCS--SCSSEECEECCCEEEEEEEETTEEEEEEEECGGGGGGEEEEEEEEEEEECTTCC-BSTTCCCSSEEEEE
T ss_pred ECCCccCCC--CCCCcccccccCEEEEEEecCCceEEEeCCHHHHHhhhccceeecceEecCCce-EccCCCceEEEEEE
Confidence 998876543 3579999999999999985 23 3799999999999999776555555554432 24444567888988
Q ss_pred EEEecccccccccccccCCCCcccceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCCCCCCcceeEE-
Q 008686 406 SFQTTAFEKAEVLDSIWTNPQFLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFL- 484 (557)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~~~~~~~~~~~- 484 (557)
+|+... ...|||.|+++. +|+|.|+|+..+ +. +++||++|+... ..+.+++.+
T Consensus 395 ~~~~~~----------------~~~fgl~l~~~~--~e~t~i~~d~~~---~~---l~~DR~~sg~~~--~~~~~~~~~~ 448 (516)
T 3sc7_X 395 AFYPDA----------------GSVLSLAVRKGA--SEQTVIKYTQSD---AT---LSVDRTESGDIS--YDPAAGGVHT 448 (516)
T ss_dssp EEEECT----------------TCEEEEEEEECS--SCCEEEEEETTT---TE---EEEECTTSSCCC--SCTTSSSEEE
T ss_pred EEEcCC----------------CCEEEEEEecCC--CcEEEEEEEccC---CE---EEEecCCCCCcc--ccCCcceEEE
Confidence 887631 125899998764 688999998643 22 468999996421 223333333
Q ss_pred -eecC-CCCeEEEEEEEeCCeEEEEecCCceEEEEEeecCCCcCCceEEEEEecCceeEEEEEEEeeccC
Q 008686 485 -DLDP-VHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMK 552 (557)
Q Consensus 485 -~~~~-~~~~~~LrIfvD~S~vEVFvNdG~~~lTsRiyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~m~ 552 (557)
++.+ .++.++||||||+||||||+||||.|||+||||... +.+|+++++|+ .+++.++++|+|+
T Consensus 449 ~~l~~~~~~~~~Lri~vD~SsvEvF~n~G~~v~Tsrvyp~~~---~~~i~l~a~gG-~~~~~~l~v~~l~ 514 (516)
T 3sc7_X 449 AKLEEDGTGLVSIRVLVDTCSVEVFGGQGEAVISDLIFPSDS---SDGLALEVTGG-NAVLQSVDVRSVS 514 (516)
T ss_dssp EECCCCTTSCEEEEEEEETTEEEEEETTTTEEEEEECCCCTT---CCEEEEEEESS-CEEEEEEEEEEEC
T ss_pred eeeccCCCCcEEEEEEEeCcEEEEEECCCEEEEEEEecCCCC---CCeEEEEEcCC-cEEEEEEEEEEee
Confidence 3322 257899999999999999999999999999999865 46777777654 5789999999986
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-96 Score=798.29 Aligned_cols=462 Identities=20% Similarity=0.350 Sum_probs=359.0
Q ss_pred CCCCCCCCcccccccCCCCCccCCcceEEE--CCEEEEEEEEe----cCC-CeEEEEEEeCCCCcceecCCCCCCCCCcC
Q 008686 41 SSITSQPYRTGYHFQPPSSWMNDPNGPMIY--KGIYHFFYQYK----LWD-TVVWGHSTSTDMVNWTPHDAAIYPSQPFD 113 (557)
Q Consensus 41 ~~~~~~~~rp~yH~~p~~gw~nDPnG~~~~--~G~YHlfyq~~----~~g-~~~Wgha~S~DlvhW~~~~~aL~P~~~~d 113 (557)
++...+.|||+|||+||.||||||||++|+ +|+|||||||+ .|| +|+||||+|+|||||+++|+||.|+. |
T Consensus 2 ~~~~~~~~Rp~~H~~P~~gwmNDPNG~~y~~~~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~DLvhW~~~~~aL~P~~--d 79 (509)
T 3kf3_A 2 SVDTSEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDEHEIAIGPEH--D 79 (509)
T ss_dssp CCCCHHHHSCSSSCCCSSEEEEEEEEEEEETTTTEEEEEEEEETTCSSCCSSBEEEEEEESSSSSCEECSCCBCCSS--T
T ss_pred cccccccccccEeecCCcCCeeCCcceEEeCCCCEEEEEEecCCCCCCCCCcCEEEEEEccCCCCcEECcccccccc--c
Confidence 345667899999999999999999999998 49999999999 688 49999999999999999999999986 7
Q ss_pred CCceEeeeEEEcc-------------CCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCC
Q 008686 114 ANSCWSGSVTILP-------------GGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGS 180 (557)
Q Consensus 114 ~~gv~SGsav~~~-------------dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~ 180 (557)
.+|||||||+++. +|+++|+|||+.+ ..|.|++|+|.|++ .+|+|++.||||.. ...+
T Consensus 80 ~~G~~SGSav~d~~~t~g~~~~~~~p~~~l~~~YTg~~~-~~q~q~lA~S~D~g----~~~~k~~~nPVi~~----~~~~ 150 (509)
T 3kf3_A 80 NEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIP-DNQTQDIAFSLDGG----YTFTKYENNPVIDV----SSNQ 150 (509)
T ss_dssp TCEEEEEEEEECTTCTTSCCCTTSCGGGCEEEEEEEEET-TEEEEEEEEESSSS----SSCEECTTCCSBCC----SCSS
T ss_pred CCCEEeceEEEeCCccccccccccCCCCceEEEECCCCC-CCeeEEEEEECCCC----cceEEcCCCceEcC----CCCc
Confidence 8999999999853 2579999999864 57999999999964 69999988999964 2479
Q ss_pred ccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCc
Q 008686 181 FRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPN 260 (557)
Q Consensus 181 fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~ 260 (557)
||||+|+|++++|+|+|++|+.. .|+|++|+|+||++|++.+.+.. ...++||||||||+|+.+| +.+
T Consensus 151 fRDPkVfw~~~~g~w~Mv~g~~~--~g~i~ly~S~DL~~W~~~~~~~~-~~~G~mwECPdlf~l~~~~---------~~~ 218 (509)
T 3kf3_A 151 FRDPKVFWHEDSNQWIMVVSKSQ--EYKIQIFGSANLKNWVLNSNFSS-GYYGNQYECPGLIEVPIEN---------SDK 218 (509)
T ss_dssp CEEEEEEEETTTTEEEEEEEEGG--GTEEEEEEESSSSSCEEEEEECC-BCCCSCEEEEEEEEEEBTT---------SSC
T ss_pred ccCCeEEEECCCCEEEEEEEECC--CCEEEEEECCCCCCceEcccccc-CCccceeECCeEEEECccC---------CCC
Confidence 99999888877899999998643 57899999999999999987655 4567799999999998543 124
Q ss_pred eeEEEEEeecC-----CceeEEEEEEEecCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCC
Q 008686 261 IKHVLKVSLSN-----YQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESST 334 (557)
Q Consensus 261 ~~~vl~~s~~~-----~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~ 334 (557)
.||||++|.++ ...++|++|+||+. +|+|+.. .+++||+|+ |||||||.++ +||||+||||++|++
T Consensus 219 ~k~vL~~s~~~~~p~g~~~~~Y~vG~~d~~--~f~~~~~-----~~~~lD~G~DfYA~qtf~~~-~grri~igWm~~~~~ 290 (509)
T 3kf3_A 219 SKWVMFLAINPGSPLGGSINQYFVGDFDGF--QFVPDDS-----QTRFVDIGKDFYAFQTFSEV-EHGVLGLAWASNWQY 290 (509)
T ss_dssp EEEEEEEEECSCCTTSSCEEEEEEEEECSS--CEEESSC-----BCEESCCSSSCEEEEECBSC-SSSEEEEEECSCTTT
T ss_pred ceEEEEEccCCCCCCCCCceEEEEEEEeCC--EEEecCc-----cceeeccCCcceeeceeeCC-CCCEEEEEecCCccc
Confidence 69999998653 34679999999974 8998753 257899999 9999999654 799999999999987
Q ss_pred CCCCCCCCccccccccEEEEEecc--C-----CeEEecchH-HHHhhhcCccccCCeEecCCceEEec--ccccceeEEE
Q 008686 335 RSDNLKKGWAGLQATPRNLWLDKS--G-----RQLMQWPIS-EIEKLRGNQVKWPAKLLERGSMVGIT--GITAAQADVE 404 (557)
Q Consensus 335 ~~~~~~~gW~g~ltlPReL~l~~~--g-----~~L~q~Pv~-el~~LR~~~~~~~~~~~~~~~~~~l~--~~~~~~~~i~ 404 (557)
..+.++.+|+|+|||||||+|++. | .+|+|+||+ ||++||.... +.+..+..+..+.+. +. ..++|++
T Consensus 291 ~~~~p~~~W~g~~tlPRel~l~~~~~~~~~~~~~L~q~Pv~~el~~lr~~~~-~~~~~~~~~~~~~~~~~~~-~~~~el~ 368 (509)
T 3kf3_A 291 ADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSINVVDKLK-KKNVKLTNKKPIKTNFKGS-TGLFDFN 368 (509)
T ss_dssp TTTSSCCSEECCBCCCEEEEEEEEESSSSCEEEEEEEEECCCTTSEEEEEEE-EEEEECCTTSCEECCCSCC-CSEEEEE
T ss_pred ccCCCCCCcccccccCEEEEEEecccCCCCCccEEEEEEcHHHHHHhhCcce-ecceEecCCceeEEecCCC-CceEEEE
Confidence 665667899999999999999861 1 279999999 9999996543 555555544433222 22 2367788
Q ss_pred EEEEecccccccccccccCCCCcccceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCCCCC-CcceeE
Q 008686 405 ISFQTTAFEKAEVLDSIWTNPQFLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDK-TSYGAF 483 (557)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~~~~-~~~~~~ 483 (557)
++|+..... .+. ......|+|.++.+.+..|+|.|.||... +. +.+||++|+.. +.. +.+...
T Consensus 369 ~~~~~~~~~---~~~-----~~~~~~~~l~l~~~~~~~e~~~i~yd~~~---~~---l~~DR~~sg~~--~~~~~~~~~~ 432 (509)
T 3kf3_A 369 ITFKVLNLN---VSP-----GKTHFDILINSQELNSSVDSIKIGFDSSQ---SS---FYIDRHIPNVE--FPRKQFFTDK 432 (509)
T ss_dssp EEEEECSCC---CCG-----GGSEEEEEEEECCSSSCCCEEEEEEETTT---TE---EEEECCCTTCC--CTTGGGCCCE
T ss_pred EEEeccccc---ccc-----cccceeEEEEEEecCCCCcEEEEEEECCC---CE---EEEECCCCCCC--cccCccccce
Confidence 777664210 000 00123578887766677889999998642 32 35699999741 111 111111
Q ss_pred --EeecC-----CCCeEEEEEEEeCCeEEEEecCCceEEEEEeecCCCcCCceEEEEEecCce-eEEEEEEEeeccC
Q 008686 484 --LDLDP-----VHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTE-KVNITSLRAWSMK 552 (557)
Q Consensus 484 --~~~~~-----~~~~~~LrIfvD~S~vEVFvNdG~~~lTsRiyp~~~~~~~~~i~~~~~g~~-~~~~~~l~~w~m~ 552 (557)
..+.+ ..+.++||||||+||||||+|||+.|||+||||.++. ...+|++++++++ .++|.++++.+|.
T Consensus 433 ~~~~~~p~~~~~~~~~~~L~i~vD~ssvEvF~ndG~~v~T~~iFP~~~~-~~~~l~~~s~~~g~~~~i~~~~~~~l~ 508 (509)
T 3kf3_A 433 LAAYLEPLDYDQDLRVFSLYGIVDKNIIELYFNDGTVAMTNTFFMGEGK-YPHDIQIVTDTEEPLFELESVIIRELN 508 (509)
T ss_dssp EEEECCCSEEETTEEEEEEEEEEETTEEEEEETTTTEEEEEECCCSTTC-CEEEEEEEECCSSCSEEEEEEEEEEEE
T ss_pred eEEeeccccccccCCeEEEEEEEeccEEEEEECCCEEEEEEEEcCCCCC-CCceEEEEEcCCCeEEEEEEEEEEecC
Confidence 22222 2358999999999999999999999999999998752 1346777776444 4788999998875
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-96 Score=794.31 Aligned_cols=442 Identities=21% Similarity=0.365 Sum_probs=349.0
Q ss_pred cccccccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEE
Q 008686 49 RTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTI 124 (557)
Q Consensus 49 rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~ 124 (557)
.|+|||+||.||||||||++|++|+|||||||+ .||+ ||||+|+|||||+++|+||.|+. .+|||||||++
T Consensus 1 ~P~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~~g~--WgHa~S~DLvhW~~~~~aL~P~~---~~g~~SGSav~ 75 (492)
T 4ffh_A 1 MAVYHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNNGPGG--WDHASTTDGVAFTHHGTVMPLRP---DFPVWSGSAVV 75 (492)
T ss_dssp -CCSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSTTCCCE--EEEEEESSSSSCEEEEEEECCBT---TBCCCCEEEEE
T ss_pred CCcEeEcCCCCCeeCCeeeEEECCEEEEEEECCCCCCCCCc--EEEEEeCCCCccEECCCCCCCCC---CCCEEeceEEE
Confidence 489999999999999999999999999999999 5776 99999999999999999999976 47999999998
Q ss_pred ccCCe-------EEEEEeeecC--CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCC------------ccC
Q 008686 125 LPGGN-------PAVLYTGIDA--GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGS------------FRD 183 (557)
Q Consensus 125 ~~dg~-------~~l~YTg~~~--~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~------------fRD 183 (557)
+++|+ ++|||||+.+ .+.|.|++|+|+|++ ++|+|+ .||||.+|.. .+ |||
T Consensus 76 ~~~~~~g~~~~~~~l~YTg~~~~~~~~q~q~lA~S~D~g----~~w~k~-~nPvi~~p~~---~~~~~~~~~~~~~~fRD 147 (492)
T 4ffh_A 76 DTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGG----FTFTAL-PDPVIVNTDG---RAATTPAEIENAEWFRD 147 (492)
T ss_dssp ETTCSSSSCTTEEEEEEEEEGGGCGGGEEEEEEEESSSS----SSCEEC-SSCSBCCTTT---TTCCSHHHHHHHTCEEE
T ss_pred eCCCccccCCCcEEEEEeecccCCCCcEEEEEEEeCCCC----ceEEEc-CccccCCCCc---cccccccccccCCCCcC
Confidence 75664 9999999864 357999999999864 799999 7899976533 35 999
Q ss_pred CeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeE
Q 008686 184 PTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKH 263 (557)
Q Consensus 184 P~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~ 263 (557)
|+|+|.+++|+|||++ ++ .++|+||+|+||++|++.+.+......++||||||||+|+.++ ++.||
T Consensus 148 P~V~~~~~~g~w~mv~-a~---~~~i~ly~S~DL~~W~~~~~~~~~~~~g~mwECPdlf~l~~~~----------~~~k~ 213 (492)
T 4ffh_A 148 PKIHWDTARGEWVCVI-GR---LRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD----------GTRHW 213 (492)
T ss_dssp EEEEEETTTTEEEEEE-EE---TTEEEEEEESSSSSCEECCCEECSCGGGCCCEEEEEEEEECTT----------SCEEE
T ss_pred CEEEEECCCCEEEEEE-EC---CCeEEEEECCCCCCceEeccccccCCccceEECCeEEEECCCC----------CCceE
Confidence 9987765689999999 54 3699999999999999998755443456899999999998432 24699
Q ss_pred EEEEeecC-----CceeEEEEEEEecCCCeEeecCCccCCCCccccccCC-Cccceeee--eCCCCcEEEEEEecCCCCC
Q 008686 264 VLKVSLSN-----YQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFF--DSAKNRRILWGWINESSTR 335 (557)
Q Consensus 264 vl~~s~~~-----~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~--d~~~gr~i~~gW~~~~~~~ 335 (557)
||++|.++ ...+.|++|+||+ .+|+|+.. .+++||+|+ |||||||. +.++||||+||||++|++.
T Consensus 214 vL~~s~~~~~~~~~~~~~Y~vG~~d~--~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~~grri~~gW~~~~~~~ 286 (492)
T 4ffh_A 214 VLAASMDAYGIGLPMTYAYWTGTWDG--EQFHADDL-----TPQWLDWGWDWYAAVTWPSIDAPETKRLAIAWMNNWKYA 286 (492)
T ss_dssp EEEEECCCGGGTCCSSEEEEEEEECS--SCEEESCS-----SCEESCCSSCCEEEEEEECSSCTTTCEEEEEECCCTTTC
T ss_pred EEEEccCCCCCCCccceEEEEEEeeC--CEEEeCCC-----CccceeeCCCcccCCeEccCCCCCCCEEEEEecCCCccc
Confidence 99999643 3467999999995 58998753 267999999 99999999 3447999999999999854
Q ss_pred ---CCCC-CCCccccccccEEEEEec-cCC--eEEecchHHHHhhhcCccccCCeEecCCceEEecccccceeEEEEEEE
Q 008686 336 ---SDNL-KKGWAGLQATPRNLWLDK-SGR--QLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQ 408 (557)
Q Consensus 336 ---~~~~-~~gW~g~ltlPReL~l~~-~g~--~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~ 408 (557)
.++. ..||+|+|||||||+|++ +|+ +|+|+|++||++||.+.+.+.+..+..+. .+ ...+..++++++++
T Consensus 287 ~~~~pt~~~~gW~g~~tlPRel~l~~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~--~~-~~~~~~~el~~~~~ 363 (492)
T 4ffh_A 287 ARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLPDRTVDGSA--VL-PWNGRAYEIELDIA 363 (492)
T ss_dssp SSCCHHHHHHSEECCBCCCEEEEEEECTTSCEEEEEEECGGGGGGEEEEEEECCEEESSEE--EC-SCCCSSEEEEEEEE
T ss_pred cccCCcccccCcccccccCEEEEEEEcCCCeeEEEEeehHHHHHhhccceeecceeccCce--ee-cCCCceEEEEEEEc
Confidence 3333 378999999999999984 243 89999999999999988766665554322 12 22345677777665
Q ss_pred ecccccccccccccCCCCcccceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCCCCCCcceeEEeecC
Q 008686 409 TTAFEKAEVLDSIWTNPQFLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDP 488 (557)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~~~~~~~~~~~~~~~ 488 (557)
.. ....|||.|+.+++ +.+.|.||... +. +.+||++|+...-..........++.+
T Consensus 364 ~~----------------~~~~~gl~l~~~~~--~~~~i~yd~~~---~~---l~ldR~~sg~~~~~~~~~~~~~~~~~~ 419 (492)
T 4ffh_A 364 WD----------------TATNVGISVGRSPD--GTRHTNIGKYG---AD---LYVDRGPSDLAGYSLAPYSRAAAPIDP 419 (492)
T ss_dssp ES----------------SCSEEEEEEEECTT--SSCCEEEEEET---TE---EEEECGGGCCTTSCCTTCCEEEEECCT
T ss_pred cC----------------CccEEEEEEEECCC--CeEEEEEECcC---CE---EEEEccCCCCccccccCCceEEEEecC
Confidence 42 12368999988765 34789998753 32 357999987432110101112234434
Q ss_pred CCCeEEEEEEEeCCeEEEEecCCceEEEEEeecCCCcCCceEEEEEecCceeEEEEEEEeeccCccc
Q 008686 489 VHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQ 555 (557)
Q Consensus 489 ~~~~~~LrIfvD~S~vEVFvNdG~~~lTsRiyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~m~~~~ 555 (557)
.++.++||||||+|+||||+|||+.|||+||||... +.+|+++++++ .++|.++++|+|+++-
T Consensus 420 ~~~~~~L~I~vD~SsvEvFvndG~~v~T~rifp~~~---~~~i~~~a~gg-~~~~~~l~v~~l~~~~ 482 (492)
T 4ffh_A 420 GARSVHLRILVDTQSVEVFVNAGHTVLSQQVHFAEG---DTGISLYTDGG-PAHFTGIVVREIGQAI 482 (492)
T ss_dssp TCCEEEEEEEEETTEEEEEETTTTEEEEEECCCCTT---CCEEEEEEESS-CEEEEEEEEEEECCC-
T ss_pred CCCcEEEEEEEeCCEEEEEECCCEEEEEEEEeCCCC---CCeEEEEEcCC-eEEEEEEEEEeCchhh
Confidence 468999999999999999999999999999999865 46777777654 5789999999999864
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-96 Score=812.60 Aligned_cols=474 Identities=18% Similarity=0.260 Sum_probs=365.3
Q ss_pred CccccccCCCCCCCCCCcccccccCCCCCccCCcceEE--ECCEEEEEEEEecCCCeEEEEEEeCCCCcceec----CCC
Q 008686 32 TLQTCQSFSSSITSQPYRTGYHFQPPSSWMNDPNGPMI--YKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPH----DAA 105 (557)
Q Consensus 32 ~~~~~~~~~~~~~~~~~rp~yH~~p~~gw~nDPnG~~~--~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~----~~a 105 (557)
+|++| -++...++|||+|||+||.||||||||++| ++|+|||||||++|| ||||+|+|||||+++ |+|
T Consensus 13 ~l~~~---~~~~~~~~~Rp~~H~~p~~gwmNDPnG~~yD~~~G~YHlFYQ~~P~g---WgHa~S~DLvhW~~~~~~~~~a 86 (634)
T 3lig_A 13 NLSTL---PNNTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGDG---IAGATTANLATYTDTSDNGSFL 86 (634)
T ss_dssp CGGGS---CTTTTTTTSCCSSSCCCSSEEEEEECCCEECTTTCCEEEEEEETTSC---EEEEEESSSSCCEESCSTTCEE
T ss_pred HHHHh---hhcccccccCccEeEcCCCCcccCCccceEeCCCCEEEEEEecCCCc---eeEEEecCcCceeECcCCCCce
Confidence 88898 677888999999999999999999999999 899999999999988 999999999999999 899
Q ss_pred CCCCCCcCCCceEeeeEEEc-cCCeEEEEEeeecC----------CCcceEEEEEEcCCCCCccceeecCCCCceEe-cC
Q 008686 106 IYPSQPFDANSCWSGSVTIL-PGGNPAVLYTGIDA----------GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMV-PA 173 (557)
Q Consensus 106 L~P~~~~d~~gv~SGsav~~-~dg~~~l~YTg~~~----------~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~-~p 173 (557)
|.|+..+|.+|||||||+++ .+|+++|||||+.+ .+.|.|++|+|+|. +++|+|++.||||. +|
T Consensus 87 L~P~~~~D~~G~~SGSav~~~~~g~~~~~YTg~~~~~~~~~~~~~~~~q~Q~lA~S~D~----g~~w~K~~~nPVi~~~p 162 (634)
T 3lig_A 87 IQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTRGSETQSLAVARDG----GRRFDKLDQGPVIADHP 162 (634)
T ss_dssp ECSCSSSCSSEEEEEEEESSCGGGSCEEEEEEECSCCCCTTSCCCTTSEEEEEEEEEGG----GTEEEECSSSCSBCSSS
T ss_pred ecCCCCCCCCCcEeeEEEEECCCCEEEEEEEecccccccccCcCCCCcEEEEEEEECCC----CCEEEECCCCceEcCCC
Confidence 99999999999999999864 27899999999853 24689999999985 38999998899996 46
Q ss_pred CCCCCCCccCCeEEE----------------------------ecCCCeEEEEEeeec-CCccEEEEEE--eCC---CCC
Q 008686 174 DQIDPGSFRDPTTAW----------------------------IGPDKIWRVIIGSKI-NDTGLAILYR--SKD---FVN 219 (557)
Q Consensus 174 ~~~~~~~fRDP~V~~----------------------------~~~~g~~~m~~ga~~-~~~G~i~ly~--S~D---l~~ 219 (557)
+++...+||||+|+| ..++|+|||++|++. +..|+|+||+ |+| |.+
T Consensus 163 ~g~~~~~fRDPkV~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ymvlg~~~~~~~g~v~lY~~~s~dd~~l~~ 242 (634)
T 3lig_A 163 FAVDVTAFRAPFVFRSARLDVLLSLDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEFQY 242 (634)
T ss_dssp TTCCEEEEEEEEEECCHHHHHHHHSCTTTTTSHHHHHHHHHTCCGGGCCCEEEEEEEETTTEEEEEEEEEGGGCTTCCSC
T ss_pred cccCCCccCCCeEccccCccccccccccccccccccccccccccCCCCeEEEEEEEecCCCCCEEEEEEeCCCCccccCC
Confidence 666678999999766 124789999999987 5678999999 778 999
Q ss_pred CEEccccccc-------------CCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC-----------Ccee
Q 008686 220 WTKAEQSLYS-------------TNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN-----------YQQD 275 (557)
Q Consensus 220 W~~~~~~~~~-------------~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~-----------~~~~ 275 (557)
|+|.|.+... ...++||||||||+|+.+|.. ....+|||++|+++ .+.+
T Consensus 243 W~~~g~l~~~~~~~~~g~~~~~~~~~G~~wECPdlf~l~~~g~~-------~~~~~~vl~~~~~g~~~~~~~~~~~~~~~ 315 (634)
T 3lig_A 243 WEYLGEWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHD-------PQTGEVFVTLGTEGSGLPIVPQVSSIHDM 315 (634)
T ss_dssp EEEEEEEEECCTTCCSSSSSCSSCCCCSEEEEEEEEEECSSSBC-------TTTSEEEEEEEEEECCSSCCTTCCCEEEE
T ss_pred ceEecccccccccccccccccccCceeeEEECCCEEEECCcccC-------CCCCcEEEEECCCCCCCcccccccccccc
Confidence 9999865431 124679999999999954310 01248999988743 1356
Q ss_pred EEEEEEEe--cC----CCeEeecCCccCCCCccccccCC-CccceeeeeCC----------C-CcEEEEEEecCCCCC--
Q 008686 276 YYTIGTYN--IT----TDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSA----------K-NRRILWGWINESSTR-- 335 (557)
Q Consensus 276 ~Y~vG~~d--~~----~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~----------~-gr~i~~gW~~~~~~~-- 335 (557)
.|++|+|+ .. +.+|.|+. +++||+|+ |||||||.++. + |||||||||++|++.
T Consensus 316 ~y~~G~~~~d~~~~~~~~~f~~~~-------~~~lD~G~dfYA~qtf~~~~~~~~~~~~~~~~gRri~igWm~~~~~~~~ 388 (634)
T 3lig_A 316 LWAAGEVGVGSEQEGAKVEFSPSM-------AGFLDWGFSAYAAAGKVLPASSAVSKTSGVEVDRYVSFVWLTGDQYEQA 388 (634)
T ss_dssp EEEEEEEEECTTSSSCSEEEEEEE-------EEEEECCTTEEEEEEEEECTTSHHHHHHTCCSCEEEEEEEECSSTTTTC
T ss_pred EEEEEEEecCcccccCceeEecCC-------ccccccCcCceecceecccccccccccccCCCCCEEEEEeCCCCccccc
Confidence 89999994 43 45788764 57899999 99999999873 2 999999999999864
Q ss_pred --CCCCCCCccccccccEEEEEec-----cC----------------------CeEEecchHHH-HhhhcCccc--cCCe
Q 008686 336 --SDNLKKGWAGLQATPRNLWLDK-----SG----------------------RQLMQWPISEI-EKLRGNQVK--WPAK 383 (557)
Q Consensus 336 --~~~~~~gW~g~ltlPReL~l~~-----~g----------------------~~L~q~Pv~el-~~LR~~~~~--~~~~ 383 (557)
.++.+.||+|+|||||||+|++ +| .+|+|+|++|| ++||.+... ..+.
T Consensus 389 ~~~pt~~~gW~g~ltlPReL~l~~~~~v~~~~l~~~~~~s~~~~~~~~G~~t~~~L~q~Pv~El~~~Lr~~~~~~~~~~~ 468 (634)
T 3lig_A 389 DGFPTAQQGWTGSLLLPRELKVQTVENVVDNELVREEGVSWVVGESDNQTATLRTLGITIARETKAALLANGSVTAEEDR 468 (634)
T ss_dssp SSCCHHHHSEECEECCCEEEEEEEEEEEECSHHHHCSSCSCEEEEECSSEEEEEEEEEEECHHHHHHHHHTCEEEEECCE
T ss_pred ccCCCCCCCCccccccCEEEEEEEecCccCccccccccccceeccccCCccccCEEEEeecHHHHHHhhccceeecccce
Confidence 3455789999999999999961 22 27999999999 889987643 2223
Q ss_pred EecCCceEEec-ccccceeEEEEEEEecccccccccccccCCCCcccceEEEEEEcCCCceeEEEEEEEeeCCCceEEEE
Q 008686 384 LLERGSMVGIT-GITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLM 462 (557)
Q Consensus 384 ~~~~~~~~~l~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~ 462 (557)
.+.....+.+. ...+..+||++++++..... ....++||.|+++. .|.|.|+||... +. +
T Consensus 469 ~~~~~~~~~~~~~~~~~~~El~~~i~~~~~~~-----------~~a~~~Gl~L~~s~--~e~T~I~Yd~~~---~~---l 529 (634)
T 3lig_A 469 TLQTAAVVPFAQSPSSKFFVLTAQLEFPASAR-----------SSPLQSGFEILASE--LERTAIYYQFSN---ES---L 529 (634)
T ss_dssp EECSEEEEECSSCCSSSEEEEEEEEECCGGGT-----------TSCCEEEEEEEESS--SCCEEEEEETTT---TE---E
T ss_pred eccccceecccccCCCcEEEEEEEEecCCCCc-----------CcccEEEEEEEeCC--CcEEEEEEECCC---CE---E
Confidence 33322222211 23456788888776531000 01236899998874 478999998642 33 3
Q ss_pred eecCCCCCCCC----CCC-CCcceeEEeecCC------CCeEEEEEEEeCCeEEEEecCCceEEEEEeecCCCcCCceEE
Q 008686 463 CSDQSRSSIND----DND-KTSYGAFLDLDPV------HEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHL 531 (557)
Q Consensus 463 ~vDr~rS~~~~----~~~-~~~~~~~~~~~~~------~~~~~LrIfvD~S~vEVFvNdG~~~lTsRiyp~~~~~~~~~i 531 (557)
.+||++|+... ++. .+..+..+.+.+. .+.++||||||+||||||||| |.|||+||||... ++.+|
T Consensus 530 ~vDRs~Sg~~~~~~~~~~~~~e~g~~R~~~~~~~~~~~~e~l~LrIfVD~SSVEVFvNd-e~vmTsRIyP~~~--~s~gI 606 (634)
T 3lig_A 530 VVDRSQTSAAAPTNPGLDSFTESGKLRLFDVIENGQEQVETLDLTVVVDNAVVEVYANG-RFALSTWARSWYD--NSTQI 606 (634)
T ss_dssp EEECTTSCTTTTTCTTSCCCCEEEECCCCEEESSSSEEECCEEEEEEEETTEEEEEETT-TEEEEEECCCCCT--TTTEE
T ss_pred EEECCCCCCcccccccccccccccceEEEeecCcccccCCceEEEEEEECCEEEEEECC-cEEEEEEecCCCC--CCCcE
Confidence 56999997532 121 1222322222221 378999999999999999998 9999999999832 35788
Q ss_pred EEEecCceeEEEEEEEeecc
Q 008686 532 YAFNNGTEKVNITSLRAWSM 551 (557)
Q Consensus 532 ~~~~~g~~~~~~~~l~~w~m 551 (557)
+++++|.+.++|.++++|+.
T Consensus 607 ~l~a~G~G~a~~~~l~vw~g 626 (634)
T 3lig_A 607 RFFHNGEGEVQFRNVSVSEG 626 (634)
T ss_dssp EEEEESSSCEEEEEEEEEEC
T ss_pred EEEECCCccEEEEEEEEecC
Confidence 88887634688999999984
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-89 Score=736.22 Aligned_cols=418 Identities=25% Similarity=0.489 Sum_probs=338.8
Q ss_pred CCcccccccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeE
Q 008686 47 PYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSV 122 (557)
Q Consensus 47 ~~rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsa 122 (557)
+|||+|||+||.||||||||++|++|+||||||++ .||+++||||+|+||+||+++++||.|+.. .+|||||||
T Consensus 1 ~~Rp~~H~~p~~gw~nDPng~~~~~G~yhlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~~~aL~p~~~--~~g~~sgsa 78 (432)
T 1w2t_A 1 LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDE--THGVFSGSA 78 (432)
T ss_dssp CCSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSCCSCEEEEEEESSSSSCEEEEEEECCSST--TEEEEEEEE
T ss_pred CCCcCCcccCCCCCeECCCcCeEECCEEEEEEecCCCCCCCCCcEEEEEEcCCCcCeEECCccCCCCCC--CCCEEeeEE
Confidence 58999999999999999999999999999999999 589999999999999999999999999876 679999999
Q ss_pred EEccCCeEEEEEeeecC-----CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEE
Q 008686 123 TILPGGNPAVLYTGIDA-----GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRV 197 (557)
Q Consensus 123 v~~~dg~~~l~YTg~~~-----~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m 197 (557)
+. .+|+++|||||+.. .+.+.|++|+|+|+ .+|+|++.+||+..++.....+||||+| |+ ++|+|||
T Consensus 79 v~-~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~-----~~w~k~~~~Pvi~~~p~~~~~~fRDP~V-f~-~dg~~~m 150 (432)
T 1w2t_A 79 VE-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKPPEEGTHAFRDPKV-NR-SNGEWRM 150 (432)
T ss_dssp EE-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSCSSTTEEEEEEEEE-EE-CSSSEEE
T ss_pred EE-ECCEEEEEEecCccCCCCCCceEEEEEEEeCCC-----CeEEecCCCceEeCCCccccccccCCEE-EE-ECCEEEE
Confidence 98 49999999999864 24688999999984 5899987899997544323679999995 66 4899999
Q ss_pred EEeeec-CCccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeE
Q 008686 198 IIGSKI-NDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDY 276 (557)
Q Consensus 198 ~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~ 276 (557)
++|++. +..|+|.+|+|+||++|++.+.+..... ++|||||+||+++ | +|||++|.++...+.
T Consensus 151 ~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~-g~~~EcP~lf~~~--g-------------~~vL~~s~~g~~~~~ 214 (432)
T 1w2t_A 151 VLGSGKDEKIGRVLLYTSDDLFHWKYEGAIFEDET-TKEIDCPDLVRIG--E-------------KDILIYSITSTNSVL 214 (432)
T ss_dssp EEEEEETTTEEEEEEEEESSSSSCEEEEEEEEETT-CSCCEEEEEEEET--T-------------EEEEEEEETTTTEEE
T ss_pred EEEEecCCCCcEEEEEECCCCCCceEccccccCCC-CCEEECCeEEEEC--C-------------EEEEEEeCCCCcceE
Confidence 999985 5678999999999999999986554433 7899999999998 6 999999998777889
Q ss_pred EEEEEEecCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCC--CCCCCCCCccccccccEEE
Q 008686 277 YTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESST--RSDNLKKGWAGLQATPRNL 353 (557)
Q Consensus 277 Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~--~~~~~~~gW~g~ltlPReL 353 (557)
|++|+|| . ..|.++. +++||+|+ |||||||.++ + |||+||||++|++ ..++.+.+|+|+|||||||
T Consensus 215 Y~~G~~d-~-~~~~~~~-------~~~lD~G~dfYA~qtf~~~-~-rri~~gW~~~~~~~~~~pt~~~gW~g~~tlPR~l 283 (432)
T 1w2t_A 215 FSMGELK-E-GKLNVEK-------RGLLDHGTDFYAAQTFFGT-D-RVVVIGWLQSWLRTGLYPTKREGWNGVMSLPREL 283 (432)
T ss_dssp EEEEEEE-T-TEEEEEE-------EEESCCSSSCEEEEECBSC-S-SEEEEEESSCTTTGGGCCGGGGTEECCBCCCEEE
T ss_pred EEEEEec-C-CEEcCCc-------cceeccCCCccccceecCC-C-CEEEEEEecCcccccccCcccCCCcCceeccEEE
Confidence 9999999 5 4555532 67999999 9999999987 4 9999999999987 4556678999999999999
Q ss_pred EEeccCCeEEecchHHHHhhhcCccccCCeEecCCceEEecccccceeEEEEEEEecccccccccccccCCCCcccceEE
Q 008686 354 WLDKSGRQLMQWPISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCPFGL 433 (557)
Q Consensus 354 ~l~~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fgl 433 (557)
+|+ +| +|+|+|++|+++||.+.+.+.+ .+ ...+....+.+++++++++. .|||
T Consensus 284 ~l~-~g-~L~q~Pv~el~~lr~~~~~~~~-~~----~~~~~~~~~~~~e~~~~~~~--------------------~~~l 336 (432)
T 1w2t_A 284 YVE-NN-ELKVKPVDELLALRKRKVFETA-KS----GTFLLDVKENSYEIVCEFSG--------------------EIEL 336 (432)
T ss_dssp EEE-TT-EEEEEECGGGGGGEEEEEEEES-SC----EEEECCCSSSCEEEEEEEEE--------------------EEEE
T ss_pred EEe-CC-EEEEEEcHHHHHhhccceeccc-cc----eeEecCCCCeEEEEEEEEec--------------------eEEE
Confidence 996 67 8999999999999998654433 11 12344444556666666531 3788
Q ss_pred EEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCCCCCCcceeEEeecCCCCeEEEEEEEeCCeEEEEecCCce
Q 008686 434 LVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKA 513 (557)
Q Consensus 434 ~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~~~~~~~~~~~~~~~~~~~~~LrIfvD~S~vEVFvNdG~~ 513 (557)
.+..+ .|.|.|.|+ . +. +++||++|+.. . .. ...+++. .++.++||||||+|+||||+|||+
T Consensus 337 ~~~~~---~~~~~i~~~--~---~~---~~~dr~~~~~~--~--g~-~~~~~~~-~~~~~~l~i~vD~s~vEvF~n~G~- 398 (432)
T 1w2t_A 337 RMGNE---SEEVVITKS--R---DE---LIVDTTRSGVS--G--GE-VRKSTVE-DEATNRIRAFLDSCSVEFFFNDSI- 398 (432)
T ss_dssp EEECS---SCEEEEEEE--T---TE---EEEECTTSSTT--C--CC-EEEEECC-CCSSEEEEEEEETTEEEEEETTTE-
T ss_pred EEeCC---CCeEEEEEE--C---CE---EEEEcCCCCCC--C--Ce-EEEEEeC-CCCeeEEEEEEcCCEEEEEECCCE-
Confidence 88532 367999998 2 22 46799988643 1 01 1123332 346799999999999999999999
Q ss_pred EEEEEeecCCCcCCceEEEEEecCceeEEEEEEEeeccCccc
Q 008686 514 CITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKAQ 555 (557)
Q Consensus 514 ~lTsRiyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~m~~~~ 555 (557)
|||+||||..+ +.+|.+++++ .++++|+|++|-
T Consensus 399 ~~t~r~yp~~~---~~~i~~~~~~------~~~~~~~l~~~w 431 (432)
T 1w2t_A 399 AFSFRIHPENV---YNILSVKSNQ------VKLEVFELENIW 431 (432)
T ss_dssp EEEEECCCSSC---CCEEEEEEEE------EEEEEEEECCSC
T ss_pred EEEEEEeCCCC---CCeEEEEeCC------cEEEEEEchhhc
Confidence 99999999865 3556665432 257999999874
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=279.17 Aligned_cols=271 Identities=15% Similarity=0.115 Sum_probs=186.2
Q ss_pred cCC-cceEE-ECCEEEEEEEEe--cCCCeEEEEEEeC----CCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEE
Q 008686 62 NDP-NGPMI-YKGIYHFFYQYK--LWDTVVWGHSTST----DMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVL 133 (557)
Q Consensus 62 nDP-nG~~~-~~G~YHlfyq~~--~~g~~~Wgha~S~----DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~ 133 (557)
+|| +|.++ ++|.+|+|++.+ .++..||.|..++ ||+||++.|++|.|+.++ +|||||||++..||+++||
T Consensus 134 ~D~~~G~v~~~~G~~vvf~L~~dP~~~d~Hi~~~ys~~g~~DLvhW~~~G~~~~~~~~~--~g~WSGSAi~~~DG~l~LF 211 (571)
T 2yfr_A 134 QDAKTGYVSNWNGYQLVIGMMGVPNVNDNHIYLLYNKYGDNDFNHWKNAGPIFGLGTPV--IQQWSGSATLNKDGSIQLY 211 (571)
T ss_dssp BCTTTCCBCCBTTEEEEEEEEECTTSCCCEEEEEEEETTCCCGGGCEEEEETTCSCCTT--EEEEEEEEEECTTSCEEEE
T ss_pred EecCCCcEEEecCceEEEEEccCCCCCCcEEEEEECcCCccccCCccCCCeEcCCCCCC--CceECCeeEECcCCEEEEE
Confidence 577 78877 789999999966 5788999999998 679999999988887433 7999999998459999999
Q ss_pred EeeecCC--CcceEEEEEE-------cCCCCCccceeecCCCCceEecCC--------------CCCCCCccCCeEEEec
Q 008686 134 YTGIDAG--NKQVQNLAVP-------KNLSDPYLKEWIKPPENPLMVPAD--------------QIDPGSFRDPTTAWIG 190 (557)
Q Consensus 134 YTg~~~~--~~~~q~lA~s-------~d~~d~~l~~w~k~~~~Pvi~~p~--------------~~~~~~fRDP~V~~~~ 190 (557)
|||+... +...|++|+. .+..+..+..|++. .+++.+++ +....+||||+| |++
T Consensus 212 YTG~~~~~~~~~~Q~Ia~a~~~l~~~~s~dgv~~~kw~~~--~~l~~~dg~~Yqt~~q~~~~~~~~~~~~FRDP~V-f~d 288 (571)
T 2yfr_A 212 YTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDND--HIVFEGDGYHYQTYDQWKETNKGADNIAMRDAHV-IDD 288 (571)
T ss_dssp EEEEECTTTTCCEEEEEEEEEEEEEEGGGTEEEEEEEEEE--EEEECCCSSSBCCHHHHHHHCSSCCCCCCEEEEE-EEC
T ss_pred EeccccCCCCcccceEEEEEeeeeecccCCCcceecccCC--CceecCCCcccccccccccccccCCcccCcCCeE-EEe
Confidence 9998653 2345666652 11111113445542 45554432 115689999995 664
Q ss_pred CCCeEEEEEeeecCC------------------------------------------ccEEEEEEeCCC----CCCEEcc
Q 008686 191 PDKIWRVIIGSKIND------------------------------------------TGLAILYRSKDF----VNWTKAE 224 (557)
Q Consensus 191 ~~g~~~m~~ga~~~~------------------------------------------~G~i~ly~S~Dl----~~W~~~~ 224 (557)
++|+|||++|++... .|+|.||+|+|+ ..|++.+
T Consensus 289 ~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~~n~~~We~~~ 368 (571)
T 2yfr_A 289 DNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDVKNPSVAKVYS 368 (571)
T ss_dssp TTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCTTSCCEEEECC
T ss_pred CCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCcCCcccceecc
Confidence 469999999998632 589999999775 5899987
Q ss_pred cccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCc-----------------eeEE-EEEEEecCC
Q 008686 225 QSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQ-----------------QDYY-TIGTYNITT 286 (557)
Q Consensus 225 ~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~-----------------~~~Y-~vG~~d~~~ 286 (557)
+++.....+.|||||++|+++ | +|||++|.+..+ ...| +++ +...
T Consensus 369 pL~~~~~v~dm~EcP~lf~~d--G-------------~yyL~~S~q~~~~t~~~~~~~A~g~~g~~~~~y~~vS--dsl~ 431 (571)
T 2yfr_A 369 PLISAPMVSDEIERPDVVKLG--N-------------KYYLFAATRLNRGSNDDAWMATNKAVGDNVAMIGYVS--DNLT 431 (571)
T ss_dssp CSEECTTTBSCCEEEEEEEET--T-------------EEEEEEEEEGGGBSCHHHHHHHHHHHSCCEEEEEEEE--SSSS
T ss_pred ccccCCCcCceeecCcEEEEC--C-------------EEEEEEeCCCCcccccccccccccCcCCceEEEEEEe--CCCC
Confidence 544333345699999999998 6 889988865321 2344 444 2335
Q ss_pred CeEeecCCc--cC-C--CCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCCCCCCCCCccccccccEEEEEeccCC
Q 008686 287 DTYIAEEGS--FD-D--NSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGR 360 (557)
Q Consensus 287 ~~F~~~~~~--~~-~--~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~~g~ 360 (557)
++|.|-+.. .- . .....++ +. +||..+..+ .+++++++||..+... ....|.|.|+-+..|.+..||.
T Consensus 432 GPy~plng~glVL~~~~P~~~~~~-tyS~Ya~p~~~~--~~~~lv~s~i~~r~~~---~~~~~~GTlap~~~vq~~~dgt 505 (571)
T 2yfr_A 432 HGYVPLNESGVVLTASVPANWRTA-TYSYYAVPVEGR--DDQLLITSYITNRGEV---AGKGMHATWAPSFLLQINPDNT 505 (571)
T ss_dssp SCCEETTTTSEEEECCSCTTSTTC-EEEEEEEEETTE--EEEEEEEEEESCSTTT---TCTTCCCEECEEEEEEEETTTE
T ss_pred CCCeeCCCCceeecCCCCCccccc-cceeEEEecccC--CCcEEEEEEeCCcCCC---CCcccceeecCcEEEEEcCCCC
Confidence 677762110 00 0 0011222 33 788776543 2468899999998753 2467999998777788877773
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-30 Score=271.21 Aligned_cols=268 Identities=15% Similarity=0.126 Sum_probs=185.0
Q ss_pred CCCccCC------cceEE-ECCEEEEEEEEe---cCCCeEEEEEEeC----CCCcceecCCCCCCC------CCc--CCC
Q 008686 58 SSWMNDP------NGPMI-YKGIYHFFYQYK---LWDTVVWGHSTST----DMVNWTPHDAAIYPS------QPF--DAN 115 (557)
Q Consensus 58 ~gw~nDP------nG~~~-~~G~YHlfyq~~---~~g~~~Wgha~S~----DlvhW~~~~~aL~P~------~~~--d~~ 115 (557)
..|+.|+ .|-+. ++|..++||+.. .++..||+|+.|+ ||+||++.|+++.+. .++ +.+
T Consensus 55 ~~~VWDsWpl~d~~G~~~~~~g~~lif~L~~dp~~~~~~hi~~~ys~~g~~dl~~W~~~G~vfp~~~~~~~~~~~~~~~~ 134 (447)
T 1oyg_A 55 GLDVWDSWPLQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQT 134 (447)
T ss_dssp TCEEEEEEEEECTTSSBCCBTTEEEEEEEEECTTCTTCCEEEEEEEETTCCSGGGCEEEEESCCTTHHHHTTCTTGGGCC
T ss_pred CCcccccceEECCCCCEEEecCcEEEEEEcCCCCCCCceEEEEEECcCCCcccCCccCCCeecCCCccccccccccCCCC
Confidence 5788765 33332 356667999988 3568999999999 569999999844332 233 368
Q ss_pred ceEeeeEEEccCCeEEEEEeeecCC--CcceEEEEE-----EcCCCCCccceeecCCCCceEecCCC-------------
Q 008686 116 SCWSGSVTILPGGNPAVLYTGIDAG--NKQVQNLAV-----PKNLSDPYLKEWIKPPENPLMVPADQ------------- 175 (557)
Q Consensus 116 gv~SGsav~~~dg~~~l~YTg~~~~--~~~~q~lA~-----s~d~~d~~l~~w~k~~~~Pvi~~p~~------------- 175 (557)
+||||||++..||+++|||||+.+. ..|++..|. ++|+ ..+..|++ .++|+.+++.
T Consensus 135 g~WSGSAi~~~dG~i~LfYTg~~~~~~~~q~I~~a~~~l~~~~dg--v~~~~~~~--~~~l~~~Dg~~Yq~~~q~~~~~~ 210 (447)
T 1oyg_A 135 QEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSS--LNINGVED--YKSIFDGDGKTYQNVQQFIDEGN 210 (447)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSC--EEEEEEEE--EEEEECCCSSSBCCHHHHHHHTG
T ss_pred CEECCceEECcCCEEEEEEEeecCCCCCceEEEEEecceeecCCC--cceecccC--CCceEcCCCcccccccccccccc
Confidence 9999999985699999999998653 234444343 2332 11345554 2466654321
Q ss_pred ---CCCCCccCCeEEEecCCCeEEEEEeeecCC------------------------------------------ccEEE
Q 008686 176 ---IDPGSFRDPTTAWIGPDKIWRVIIGSKIND------------------------------------------TGLAI 210 (557)
Q Consensus 176 ---~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~------------------------------------------~G~i~ 210 (557)
.+..+||||+| |+ ++|+|||++|++... .|+|+
T Consensus 211 ~~~~~~~~fRDP~V-f~-d~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ig 288 (447)
T 1oyg_A 211 YSSGDNHTLRDPHY-VE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALG 288 (447)
T ss_dssp GGGTCCCCCEEEEE-EE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEE
T ss_pred ccCCCccccCCCeE-Ee-ECCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcEEE
Confidence 13579999995 66 379999999998632 37998
Q ss_pred EE-EeCCCCCCEEcccccccC-CCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCc--------eeEEEEE
Q 008686 211 LY-RSKDFVNWTKAEQSLYST-NQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQ--------QDYYTIG 280 (557)
Q Consensus 211 ly-~S~Dl~~W~~~~~~~~~~-~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~--------~~~Y~vG 280 (557)
|+ .|+|+.+|++.++ +... ....+||||++|+++ | +|||++|.+... ...|++|
T Consensus 289 l~~~s~Dl~~W~~~~p-L~~~~~v~d~~EcPdlfk~d--G-------------kyyLf~S~~~s~~~~~g~~~~~vy~~g 352 (447)
T 1oyg_A 289 MIELNDDYTLKKVMKP-LIASNTVTDEIERANVFKMN--G-------------KWYLFTDSRGSKMTIDGITSNDIYMLG 352 (447)
T ss_dssp EEEECTTSSEEEEEEE-EEECTTTCSCCEEEEEEEET--T-------------EEEEEEEEEGGGCCCTTCCTTCEEEEE
T ss_pred EEEcCCCCCCceEccc-cccCCCCCCceEcCcEEEEC--C-------------EEEEEEecCCCcccccCcCCCcEEEEE
Confidence 87 6999999999864 5433 345699999999998 6 999999875322 2478777
Q ss_pred E-EecCCCeEeecC--------CccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCCCCCCCCCcccccccc
Q 008686 281 T-YNITTDTYIAEE--------GSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATP 350 (557)
Q Consensus 281 ~-~d~~~~~F~~~~--------~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlP 350 (557)
- -+...+.|.|-+ +.+ ....++ +. +||..+. +. +++++++||..... ...|.|.|+-+
T Consensus 353 ~vsdsl~GPy~plngsGlVl~~~~p---~~~~~~-~ys~ya~p~~-~~--~~~~v~sf~~~~~~-----~~~~ggtlap~ 420 (447)
T 1oyg_A 353 YVSNSLTGPYKPLNKTGLVLKMDLD---PNDVTF-TYSHFAVPQA-KG--NNVVITSYMTNRGF-----YADKQSTFAPS 420 (447)
T ss_dssp EEESSTTCCCEEGGGTSEEEEECCC---TTCTTC-EEEEEEECCS-SS--SEEEEEEEESCTTS-----CSSCCCEECBC
T ss_pred EEcCCCCCCCeeCCCCceeecCCCC---Cccccc-cceeEEEecC-CC--CeEEEEEEeCCCCc-----ccccceeecCc
Confidence 4 233456777611 000 012344 44 8998887 53 58999999998753 24699999988
Q ss_pred EEEEEeccC
Q 008686 351 RNLWLDKSG 359 (557)
Q Consensus 351 ReL~l~~~g 359 (557)
..|.++.++
T Consensus 421 ~~v~~~gd~ 429 (447)
T 1oyg_A 421 FLLNIKGKK 429 (447)
T ss_dssp EEEEEETTE
T ss_pred EEEEEcCCc
Confidence 888887543
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-24 Score=228.44 Aligned_cols=190 Identities=17% Similarity=0.242 Sum_probs=146.9
Q ss_pred CCCCCCcccc-cccCCCC--------CccCCcceEEECCEEEEEEEEec-----------------CCCeEEEEEEeCCC
Q 008686 43 ITSQPYRTGY-HFQPPSS--------WMNDPNGPMIYKGIYHFFYQYKL-----------------WDTVVWGHSTSTDM 96 (557)
Q Consensus 43 ~~~~~~rp~y-H~~p~~g--------w~nDPnG~~~~~G~YHlfyq~~~-----------------~g~~~Wgha~S~Dl 96 (557)
..++.|||.| |++|+.| ++||||++++++|+||||||+.. |+.++|+||+|+||
T Consensus 68 ~~~~~~~~~~~~~~p~~g~~~~~~~v~~~DP~~vi~~dG~Yylfyt~~~~~~~G~~~~~~~~~~~p~~~~~i~~A~S~Dl 147 (408)
T 3p2n_A 68 DLGNEWFIQFGPLQPLKGDLAYEEGVVRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWDRCDIWYATSEDG 147 (408)
T ss_dssp TCCSTTCEEECCCEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTTTCEEEEEEESSS
T ss_pred ccCCchhhcccccCCcCCCccccCCcEeCCCCEEEEECCEEEEEEEeCCCcccccccccccccccccccceEEEEEcCCC
Confidence 4688999999 9999999 89999999999999999999862 35789999999999
Q ss_pred CcceecCCCCCCCC--CcCCCceEeeeEEEccCCeEEEEEeeecCC---C-cceEEEEEEcCCCCCccceeecCCCCceE
Q 008686 97 VNWTPHDAAIYPSQ--PFDANSCWSGSVTILPGGNPAVLYTGIDAG---N-KQVQNLAVPKNLSDPYLKEWIKPPENPLM 170 (557)
Q Consensus 97 vhW~~~~~aL~P~~--~~d~~gv~SGsav~~~dg~~~l~YTg~~~~---~-~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi 170 (557)
+||++.+++|.|.. .||..+||+++++.. +|+++||||++... + ...+++|++.+.. +. |++. .+||+
T Consensus 148 v~W~~~g~~l~~~~~~~wd~~gv~aPsVi~~-dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~D---G~-W~~~-~~pli 221 (408)
T 3p2n_A 148 WTWKEEGPAVTRGEKGAYDDRSVFTVEIMKW-EDKYYLCYQTVKSPYNVRVKNQVGLAWADSPD---GP-WTKS-EEPIL 221 (408)
T ss_dssp SEEEEEEEEECCCSTTSTTSSEEEEEEEEEE-TTEEEEEEEEECSSCCTTCCCEEEEEEESSTT---CC-CEEC-SSCSB
T ss_pred CeeeEeCceeCCCCCCCcccCceEeeEEEEE-CCEEEEEEEeecCCCCCcCCCceEEEEEECCC---CC-EEEC-Cccee
Confidence 99999999998864 789999999999875 99999999997431 1 3456777765431 34 9997 57887
Q ss_pred ecC------------------CCCCCCCccCCeEEEecCCCeEEEEEeeecCC--------ccEEEEEEeCCCC-CCEEc
Q 008686 171 VPA------------------DQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND--------TGLAILYRSKDFV-NWTKA 223 (557)
Q Consensus 171 ~~p------------------~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~--------~G~i~ly~S~Dl~-~W~~~ 223 (557)
.+. ..++...+++|.|+. .+|+|||++.+...+ .-++.+++|+|+. .|+..
T Consensus 222 ~~~~~~~~~~e~d~~~~~~~~~~wd~~~v~~P~v~~--~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~Gpw~k~ 299 (408)
T 3p2n_A 222 SPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCIIP--YKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPKGPYVKS 299 (408)
T ss_dssp CCCSCCEECSSSCCTTCEEECCSTTSSEEEEEEEEE--ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEEC
T ss_pred CCCCCceEEEecCCcccccccceecCCCeEcceEEE--ECCEEEEEEEcccCccccccCCCccEEEEEEECCCCCCcEEC
Confidence 543 344555689999654 479999999886421 2468899999976 89986
Q ss_pred c-cccccCCCCCceeecceEEec
Q 008686 224 E-QSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 224 ~-~~~~~~~~~~~~ECPdlf~l~ 245 (557)
. .|+.... .| |-+|+-+
T Consensus 300 ~~nPVl~~~----~d-p~Vw~~~ 317 (408)
T 3p2n_A 300 PYNPISNSG----HE-ICVWPYN 317 (408)
T ss_dssp TTCCSCSSC----SS-CCEEEET
T ss_pred CCCCcccCC----CC-CeeEecC
Confidence 4 3554322 12 6677654
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-24 Score=225.02 Aligned_cols=190 Identities=17% Similarity=0.296 Sum_probs=149.8
Q ss_pred CCCCCCcccccccCCCC--------CccCCcceEEECCEEEEEEEEec-----------------CCCeEEEEEEeCCCC
Q 008686 43 ITSQPYRTGYHFQPPSS--------WMNDPNGPMIYKGIYHFFYQYKL-----------------WDTVVWGHSTSTDMV 97 (557)
Q Consensus 43 ~~~~~~rp~yH~~p~~g--------w~nDPnG~~~~~G~YHlfyq~~~-----------------~g~~~Wgha~S~Dlv 97 (557)
+.+..|+++||++|..| |+||||++++++|+||||||++. |+.++|+||+|+||+
T Consensus 24 ~~~g~~f~~~~~~P~~g~~~~~e~~~~~DP~~v~~~dG~Yymfyt~~~~~~~G~~~~~~~~~~~~w~~~~i~~a~S~DLv 103 (374)
T 3r4z_A 24 EKGPEWLFEFDITPLKGDLAYEEGVIRRDPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEVWHATSKDKI 103 (374)
T ss_dssp GSCSTTCEEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSCSCTTSCSSTTTTCEEEEEEESSSS
T ss_pred CCCCchHHhcccccccCCccccCCcCcCCCCeEEEECCEEEEEEEcCCCcccccccccccccccccCccEEEEEECCCCc
Confidence 45788999999999999 99999999999999999999971 467899999999999
Q ss_pred cceecCCCCCCCC--CcCCCceEeeeEEEccCCeEEEEEeeecCC----CcceEEEEEEcCCCCCccceeecCCCCceEe
Q 008686 98 NWTPHDAAIYPSQ--PFDANSCWSGSVTILPGGNPAVLYTGIDAG----NKQVQNLAVPKNLSDPYLKEWIKPPENPLMV 171 (557)
Q Consensus 98 hW~~~~~aL~P~~--~~d~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~ 171 (557)
||++++.+|.|.. .||..+||+|+++.. +|+++||||+.... ..+.+++|+|+|.. ..|++. .+||+.
T Consensus 104 ~W~~~g~~l~~~~~~~~d~~gvwaPsvi~~-dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~~----Gpw~~~-~~Pvi~ 177 (374)
T 3r4z_A 104 TWKEIGPAIQRGAAGAYDDRAVFTPEVLRH-NGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPF----GPWTKS-DAPILS 177 (374)
T ss_dssp EEEEEEEEECCCCTTSTTSSEEEEEEEEEE-TTEEEEEEEEECSSCCTTCCBEEEEEEESSTT----CCCEEC-SSCSBC
T ss_pred CcEeCcccCCCCCCCCccCCCEECCEEEEE-CCEEEEEEEeccCCCCCCCcceEEEEEECCCC----CCeEEC-CCCEeC
Confidence 9999999998864 789999999999875 99999999998642 34789999998863 579996 689986
Q ss_pred cCCC------------------CCCCCccCCeEEEecCCCeEEEEEeeecCC-----c---cEEEEEEeCCCC-CCEEcc
Q 008686 172 PADQ------------------IDPGSFRDPTTAWIGPDKIWRVIIGSKIND-----T---GLAILYRSKDFV-NWTKAE 224 (557)
Q Consensus 172 ~p~~------------------~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~-----~---G~i~ly~S~Dl~-~W~~~~ 224 (557)
+.+. ++...++||.|+ + .+|+|||++++.... . -++.+++|+++. .|+...
T Consensus 178 ~~~~~~w~~ddd~~~~~~~~~~~d~~~~~~P~v~-~-~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~Gpw~~~~ 255 (374)
T 3r4z_A 178 PENDGVWDTDEDNRFLVKEKGSFDSHKVHDPCLM-F-FNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPLGPYTKSE 255 (374)
T ss_dssp CCCCSEECSSSSCTTCEEECCSTTSSEEEEEEEE-E-ETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTTCCCEECT
T ss_pred CCcCCceeecCCceEEEecCCccccCccccceEE-E-ECCEEEEEEEecCCCCccccCCCcceEEEEEECCCCCCCEECC
Confidence 5321 233457999964 5 589999999876421 1 268899998754 698853
Q ss_pred -cccccCCCCCceeecceEEec
Q 008686 225 -QSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 225 -~~~~~~~~~~~~ECPdlf~l~ 245 (557)
.|+.... .=|.+|+.+
T Consensus 256 ~~Pi~~~~-----~dp~V~~~~ 272 (374)
T 3r4z_A 256 YNPITNSG-----HEVAVWPYK 272 (374)
T ss_dssp TCCCCSSC-----SSCCEEEET
T ss_pred CCCEeCCC-----CCCceEEeC
Confidence 4554321 136677765
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-24 Score=228.89 Aligned_cols=202 Identities=15% Similarity=0.232 Sum_probs=144.7
Q ss_pred ccccCCCCCc------cCCcc-eEEECCEEEEEEEEe---c---CCC----eEEEEEEeCC---------CCcceecCCC
Q 008686 52 YHFQPPSSWM------NDPNG-PMIYKGIYHFFYQYK---L---WDT----VVWGHSTSTD---------MVNWTPHDAA 105 (557)
Q Consensus 52 yH~~p~~gw~------nDPnG-~~~~~G~YHlfyq~~---~---~g~----~~Wgha~S~D---------lvhW~~~~~a 105 (557)
+-.+.+..|+ +||+| ++.++|.||||||.. . |+. .++||+.|+| |+||++.+.+
T Consensus 63 ~~~~~~d~wVWDsWPl~D~dg~~v~~~G~~~vF~L~a~r~~~~~~~drH~~a~I~~~yskdg~~~~~~~~l~~W~~~G~v 142 (493)
T 1w18_A 63 FPVINPDVWVWDTWTLIDKHADQFSYNGWEVIFCLTADPNAGYGFDDRHVHARIGFFYRRAGIPASRRPVNGGWTYGGHL 142 (493)
T ss_dssp CCCSCTTCEEEEEEEEECTTCCBEEETTEEEEEEEEECTTSSCCGGGCGGGCEEEEEEEESSCCGGGSCTTCCCEEEEES
T ss_pred cccccCCcceEcCeeEECCCCCEEEECCeEEEEEEecCCccCCCccCCCccceeeeEEecCccccccccccCCceECCcc
Confidence 3344577886 46888 778899999999999 2 333 4555999999 7999999998
Q ss_pred CCCCCC--------cCCCceEeeeEEEc--cCCeEEEEEeeecCC----C----cceEEEEEEc-----CCCCCccceee
Q 008686 106 IYPSQP--------FDANSCWSGSVTIL--PGGNPAVLYTGIDAG----N----KQVQNLAVPK-----NLSDPYLKEWI 162 (557)
Q Consensus 106 L~P~~~--------~d~~gv~SGsav~~--~dg~~~l~YTg~~~~----~----~~~q~lA~s~-----d~~d~~l~~w~ 162 (557)
|.++.. ++..++|||||++. .||+++|||||+... + ...|+||.+. +..+..+.+|+
T Consensus 143 f~~g~~~~~~~~~~~d~~~~WSGSAi~~~~~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a~~dgv~~~~w~ 222 (493)
T 1w18_A 143 FPDGASAQVYAGQTYTNQAEWSGSSRLMQIHGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFT 222 (493)
T ss_dssp SCTTGGGGGSTTSCCSEEEEEEEEEEESSTTSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEECSSCEEEEEEE
T ss_pred ccCCCccccccccccCcCCeEcCceEEeccCCCEEEEEEEecccccccccccCCcceeEEEEeccceeccCCCccccccc
Confidence 866543 45678999999985 699999999998531 1 1247776432 21112367898
Q ss_pred cCCCCceEecCCC-C------CCCCccCCeEEEecC-CCeEEEEEeeecC------------------------------
Q 008686 163 KPPENPLMVPADQ-I------DPGSFRDPTTAWIGP-DKIWRVIIGSKIN------------------------------ 204 (557)
Q Consensus 163 k~~~~Pvi~~p~~-~------~~~~fRDP~V~~~~~-~g~~~m~~ga~~~------------------------------ 204 (557)
|. ++|+.++.. | ...+||||+|+..++ +|+|||++++...
T Consensus 223 k~--~~l~~~DG~~Yqt~~q~~~~~fRDP~vf~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~ 300 (493)
T 1w18_A 223 AH--TPLLQPDGVLYQNGAQNEFFNFRDPFTFEDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLD 300 (493)
T ss_dssp EE--EEEECCCSSSBCCTTTCTTCCCEEEEEEECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHH
T ss_pred cC--CceeecCccccccccccCCccccCCEEEecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhccc
Confidence 85 567754321 1 246999999654432 4999999998651
Q ss_pred -----CccEEEEEEe--CCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 205 -----DTGLAILYRS--KDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 205 -----~~G~i~ly~S--~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
..|+|.|+++ +|+.+|++..+++.......++|||++|+++ | ||+|+.|.+
T Consensus 301 ~~a~~~~g~IGLa~~~s~Dl~~We~~~PL~~a~~v~deiErP~V~~~~--G-------------kyYLFtSs~ 358 (493)
T 1w18_A 301 SGAYYQKANIGLAIATDSTLSKWKFLSPLISANCVNDQTERPQVYLHN--G-------------KYYIFTISH 358 (493)
T ss_dssp TTGGGCCEEEEEEEESSTTSCCEEEEEEEEECTTTBSCCEEEEEEEET--T-------------EEEEEEEEC
T ss_pred ccchhccceEEEEEeCCCCCccceecCccccCCCCCCcEECCeEEEEC--C-------------EEEEEEEcc
Confidence 1468866665 5899999886444444455699999999998 6 999988854
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=217.66 Aligned_cols=188 Identities=14% Similarity=0.192 Sum_probs=146.9
Q ss_pred CCCccCCcceEEECCEEEEEEEEe-cCCCeEEEEEEeCCCCcceec-CCCCCCC--CCcCCCce-EeeeEEEccCCeEEE
Q 008686 58 SSWMNDPNGPMIYKGIYHFFYQYK-LWDTVVWGHSTSTDMVNWTPH-DAAIYPS--QPFDANSC-WSGSVTILPGGNPAV 132 (557)
Q Consensus 58 ~gw~nDPnG~~~~~G~YHlfyq~~-~~g~~~Wgha~S~DlvhW~~~-~~aL~P~--~~~d~~gv-~SGsav~~~dg~~~l 132 (557)
.|..| | ++++++|+||||||++ .++.++|+||+|+|++||++. +++|.|+ ..++..|| |+++++.. +|+++|
T Consensus 54 ~gv~n-~-~~i~~~g~~~lfY~~~~~~~~~~~~~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~g~~yDP~v~~~-~d~yym 130 (338)
T 1vkd_A 54 ARVFN-S-AVVPYNGEFVGVFRIDHKNTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVKI-EDTYYI 130 (338)
T ss_dssp EEEEE-E-EEEEETTEEEEEEEEEETTSCEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEEE-TTEEEE
T ss_pred CeEEc-c-EEEEECCEEEEEEEEECCCCcEEEEEEEeCCCCccEECCCCEEeCCCCCccccCCEEeCcEEEEE-CCEEEE
Confidence 34455 4 8899999999999999 667899999999999999987 5788888 67888999 89999985 899999
Q ss_pred EEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecC-CCeEEEEEeeec---CCccE
Q 008686 133 LYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGP-DKIWRVIIGSKI---NDTGL 208 (557)
Q Consensus 133 ~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~-~g~~~m~~ga~~---~~~G~ 208 (557)
+||+ .. ..+.+++|.|+|. ++|+|. ++++. + ..|||. +|.+. +|+|+|+++.+. ...|.
T Consensus 131 ~yt~-~~-~~~~i~la~S~Dl-----~~W~~~--~~i~~-~------~~rd~~-~fp~~i~Gky~m~~~~q~~~~~~~~~ 193 (338)
T 1vkd_A 131 TFCT-DD-HGPTIGVGMTKDF-----KTFVRL--PNAYV-P------FNRNGV-LFPRKINGKYVMLNRPSDNGHTPFGD 193 (338)
T ss_dssp EEEE-ES-SSEEEEEEEESSS-----SSEEEE--CCSSS-S------SEEEEE-ECSSCBTTBEEEEEEECCSSSCSCCC
T ss_pred EEEE-cC-CcceEEEEEECCC-----CeEEEC--CccCC-C------cCCceE-EEEEEECCEEEEEEEecCCCCCCCcE
Confidence 9999 64 5688999999884 799985 34432 1 469997 56533 899999998764 35688
Q ss_pred EEEEEeCCCCCCEEcccccccCCCCCcee------ecceEEecCCCCCCeeecccCCceeEEEEEeecC--CceeEEEEE
Q 008686 209 AILYRSKDFVNWTKAEQSLYSTNQSGMWE------CPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN--YQQDYYTIG 280 (557)
Q Consensus 209 i~ly~S~Dl~~W~~~~~~~~~~~~~~~~E------CPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~--~~~~~Y~vG 280 (557)
|.+++|+||.+|+..+ ++..+..+.||| ||+.|+++ + .|+|+++... .....|.+|
T Consensus 194 I~~a~S~Dl~~W~~~~-~l~~~~~~~~wE~~~ig~gp~~i~~~--~-------------gwll~y~G~~~~~~~~~Y~~G 257 (338)
T 1vkd_A 194 IFLSESPDMIHWGNHR-FVLGRSSYNWWENLKIGAGPYPIETS--E-------------GWLLIYHGVTLTCNGYVYSFG 257 (338)
T ss_dssp EEEEEESSSSCBEEEE-EEECCCSSCGGGSSEEEECSCCEEET--T-------------EEEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEcCCcccCCcCc-eEEcCCCCCCcccCccccCCCcEEeC--C-------------cEEEEEecccCCCCCcEEEEE
Confidence 9999999999999765 454443444899 79999997 3 5887765321 123457777
Q ss_pred E
Q 008686 281 T 281 (557)
Q Consensus 281 ~ 281 (557)
-
T Consensus 258 ~ 258 (338)
T 1vkd_A 258 A 258 (338)
T ss_dssp E
T ss_pred E
Confidence 6
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-23 Score=220.96 Aligned_cols=190 Identities=17% Similarity=0.290 Sum_probs=146.3
Q ss_pred CCCCCCcccccccCCCC-------Cc-cCCcceEEECCEEEEEEEEec-----------------CCCeEEEEEEeCCCC
Q 008686 43 ITSQPYRTGYHFQPPSS-------WM-NDPNGPMIYKGIYHFFYQYKL-----------------WDTVVWGHSTSTDMV 97 (557)
Q Consensus 43 ~~~~~~rp~yH~~p~~g-------w~-nDPnG~~~~~G~YHlfyq~~~-----------------~g~~~Wgha~S~Dlv 97 (557)
.....++++||.+|..| |+ ||||++++++|+||||||++. |+.++|+||+|+||+
T Consensus 64 ~~~~~~f~r~~~~Pi~g~~~~~~g~~~~DP~~v~~~dG~yymfY~~~~~~~~G~~~~~~~~~~~~~~~~~i~~a~S~Dlv 143 (404)
T 4ak5_A 64 NHDNKWFFEYKMEPLKGDLAYEEGVVRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDIWYATSKDGL 143 (404)
T ss_dssp CCCSTTCCEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTTTCEEEEEEESSSS
T ss_pred CCCCchhhhcccccccCCcccccceeecCCcEEEEECCEEEEEEEeCCCcccccccccccccccccCccEEEEEECCCCC
Confidence 45678888888666666 87 999999999999999999982 346899999999999
Q ss_pred cceecCCCCCCC--CCcCCCceEeeeEEEccCCeEEEEEeeecCC----CcceEEEEEEcCCCCCccceeecCCCCceEe
Q 008686 98 NWTPHDAAIYPS--QPFDANSCWSGSVTILPGGNPAVLYTGIDAG----NKQVQNLAVPKNLSDPYLKEWIKPPENPLMV 171 (557)
Q Consensus 98 hW~~~~~aL~P~--~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~ 171 (557)
||++++.+|.|. ..||..+||+++|+.. +|+++||||+.... ..+.+++|+|++.. ..|++. .+||+.
T Consensus 144 ~W~~~g~~L~~~~~~~wd~~gv~aP~Vi~~-~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~----Gpwt~~-~~Pvl~ 217 (404)
T 4ak5_A 144 TWKEQGIAVKRGEKGAYDDRSVFTPEVMEW-KGKYYLCYQAVKSPYTVRVKNTIGMACADSPE----GLWTKT-DKPVLE 217 (404)
T ss_dssp EEEEEEEEECCCSTTSTTSSEEEEEEEEEE-TTEEEEEEEEECSCCCTTCCCEEEEEEESSTT----CCCEEC-SSCSBC
T ss_pred CceeCceEeecCCCCccccCCEEeeEEEEE-CCEEEEEEEeccCCCCCCCcceEEEEEEeCCC----CCceEC-CCceec
Confidence 999999999885 4789999999999875 99999999998642 34678999998743 369985 689986
Q ss_pred cCCC------------------CCCCCccCCeEEEecCCCeEEEEEeeecCC--------ccEEEEEEeCCCC-CCEEcc
Q 008686 172 PADQ------------------IDPGSFRDPTTAWIGPDKIWRVIIGSKIND--------TGLAILYRSKDFV-NWTKAE 224 (557)
Q Consensus 172 ~p~~------------------~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~--------~G~i~ly~S~Dl~-~W~~~~ 224 (557)
+.+. ++...++||.|+ + .+|+|||++.+.... .-++.++.|+|+. .|+...
T Consensus 218 ~~~~~~W~~ddd~~~~~~~~~~wD~~~~~~P~v~-~-~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~~Gpw~k~~ 295 (404)
T 4ak5_A 218 PSDTGEWEGDEDNRFKVVSKGDFDSHKVHDPCII-P-YNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPMGPYVKSE 295 (404)
T ss_dssp CCSCCEECSSSSCTTCEEECCSTTSSEEEEEEEE-E-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEECT
T ss_pred CCCCcceeeccCceeeeccCCcccCCcEECCEEE-E-ECCEEEEEEECCCCCCccccCCCcceEEEEEECCCCCCcEECC
Confidence 5321 234567899965 4 478999999876421 2378999999986 798753
Q ss_pred -cccccCCCCCceeecceEEec
Q 008686 225 -QSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 225 -~~~~~~~~~~~~ECPdlf~l~ 245 (557)
.|+.... .|+ .+|+-+
T Consensus 296 ~nPv~~~~----~e~-~Vw~~~ 312 (404)
T 4ak5_A 296 YNPISNSG----HEV-CVWPYK 312 (404)
T ss_dssp TCCSCSSC----SSC-CEEEET
T ss_pred CCceecCC----Ccc-eEEEeC
Confidence 3554321 344 566554
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-22 Score=206.13 Aligned_cols=186 Identities=11% Similarity=0.169 Sum_probs=143.3
Q ss_pred CCccCCcceEEEC--CEEEEEEEEe---cCCCeEEEEEEeCCCCcceecCCCCCCCC--CcCCCceEeeeEEEcc---CC
Q 008686 59 SWMNDPNGPMIYK--GIYHFFYQYK---LWDTVVWGHSTSTDMVNWTPHDAAIYPSQ--PFDANSCWSGSVTILP---GG 128 (557)
Q Consensus 59 gw~nDPnG~~~~~--G~YHlfyq~~---~~g~~~Wgha~S~DlvhW~~~~~aL~P~~--~~d~~gv~SGsav~~~---dg 128 (557)
||.+||+ +++.+ |+||||+++. .|+.++|.|++|+||+||+..+.+|.+.. .|+..++|+++++..+ +|
T Consensus 13 g~~~DP~-i~~~~~dg~yyl~~t~~~~~~~~~~~~~~~~S~DLv~W~~~g~~l~~~~~~~~~~~~~wAP~v~~~~~~~~G 91 (311)
T 3qz4_A 13 GFHADPE-VLYSHQTKRYYIYPTSDGFPGWGGSYFKVFSSKNLKTWKEETVILEMGKNVSWANGNAWAPCIEEKKIDGKY 91 (311)
T ss_dssp SSEEEEE-EEEETTTTEEEEEEEECSSGGGCCCEECCEEESSSSSCEECCCCEEBTTTBTTEEEEEEEEEEEEEEETTEE
T ss_pred CCcCCce-EEEECCCCEEEEEEecCCCCCCCCcEEEEEECCCCCCcEECceecccccCCCcccCCcCCCeeEEeeecCCC
Confidence 7899998 88887 9999999976 46678899999999999999999997764 6777899999998753 89
Q ss_pred eEEEEEeeecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecC-CCeEEEEEeeecCCc
Q 008686 129 NPAVLYTGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGP-DKIWRVIIGSKINDT 206 (557)
Q Consensus 129 ~~~l~YTg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~-~g~~~m~~ga~~~~~ 206 (557)
+++||||+.... ..+.+++|+|+|.. ..|++. .+||+...+. ...+++||.|+ .++ +|++||++|+
T Consensus 92 kyylyyt~~~~~~~~~~i~va~s~~p~----Gpw~~~-~~p~~~~~~~-g~~~~iDp~vf-~dd~dG~~yl~~g~----- 159 (311)
T 3qz4_A 92 KYFFYYSANPTTNKGKQIGVAVADSPT----GPFTDL-GKPIITSSPT-GRGQQIDVDVF-TDPVSGKSYLYWGN----- 159 (311)
T ss_dssp EEEEEEEEEETTCSSCEEEEEEESSTT----CCCEEC-SSCSBCSCTT-SSSBSCCCEEE-ECTTTCCEEEEECB-----
T ss_pred EEEEEEEeccCCCCCeeEEEEEECCCC----CCceEC-CcceEcCCCC-CCcccccccEE-EECCCCcEEEEEcC-----
Confidence 999999998643 35788999998763 479984 5788854322 13578999964 545 8999999986
Q ss_pred cEEEEEE-eCCCCCCEEcccccccCC-----CCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCC
Q 008686 207 GLAILYR-SKDFVNWTKAEQSLYSTN-----QSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNY 272 (557)
Q Consensus 207 G~i~ly~-S~Dl~~W~~~~~~~~~~~-----~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~ 272 (557)
|.|.+++ |+|+.+|......+..+. ...++|||.+|+.+ | +++|++|....
T Consensus 160 ~~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--g-------------~YyL~~s~~~~ 216 (311)
T 3qz4_A 160 GYMAGAELNDDMLSIKEETTVVLTPKGGTLQTYAYREAPYVIYRK--G-------------IYYFFWSVDDT 216 (311)
T ss_dssp SSCEEEEBCTTSSSBCGGGCEECCCCCCCTTTTCCCEEEEEEEET--T-------------EEEEEEEESCT
T ss_pred CCEEEEEeCCcccccCCCceEEeCCCCCcccccceeeccEEEEEC--C-------------EEEEEEEcCCC
Confidence 3466777 788888864322233221 12479999999997 6 89999987543
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.1e-21 Score=198.66 Aligned_cols=149 Identities=19% Similarity=0.308 Sum_probs=115.1
Q ss_pred ccCCcceEEECCEEEEEEEEe-c------CCCeEEEEEEeCCCCcceec-CCCCCCCCCcCC-----CceEeeeEEEccC
Q 008686 61 MNDPNGPMIYKGIYHFFYQYK-L------WDTVVWGHSTSTDMVNWTPH-DAAIYPSQPFDA-----NSCWSGSVTILPG 127 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~-~------~g~~~Wgha~S~DlvhW~~~-~~aL~P~~~~d~-----~gv~SGsav~~~d 127 (557)
+-.| ++++++|+||||||++ . ++.++|+||+|+|++||++. .++|.|+..++. .||++++++..+|
T Consensus 53 vfnp-~ai~~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DGi~w~~~~~Pvl~P~~~~~~~~e~~~gv~DP~v~~~ed 131 (364)
T 3qc2_A 53 TFNP-AATLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQREKTPVFYPDNDSQKELEWPGGCEDPRIAVTDD 131 (364)
T ss_dssp EEEE-EEEEETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTT
T ss_pred eECc-eEEEECCEEEEEEEEECCCCcccCCCceEEEEEEeCCCceeeEcCcCeEcCCCccccccccCCcEECCEEEEeCC
Confidence 3456 6888999999999999 1 25799999999999999985 478999987664 7999999998558
Q ss_pred CeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCC--CCCCCCccCCeEE--------E-ecCCCeEE
Q 008686 128 GNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPAD--QIDPGSFRDPTTA--------W-IGPDKIWR 196 (557)
Q Consensus 128 g~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~--~~~~~~fRDP~V~--------~-~~~~g~~~ 196 (557)
|+++|+||+... ....+++|+|+|. ++|+|. ++++.+.. .+.....+|+.++ + ...+|+|+
T Consensus 132 G~yym~Yta~~~-~~~~i~lA~S~Dl-----~~W~k~--g~i~~p~~~g~f~~~~~kd~~i~~~~r~~~lfp~ki~GkY~ 203 (364)
T 3qc2_A 132 GLYVMMYTQWNR-HVPRLAVATSRNL-----KDWTKH--GPAFAKAFDGKFFNLGCKSGSILTEVVKGKQVIKKVNGKYF 203 (364)
T ss_dssp SCEEEEEEEECS-SCEEEEEEEESSS-----SSCEEE--EETTSSHHHHTTTTCCCCCEEEEEEEETTEEEECEETTEEE
T ss_pred CEEEEEEEecCC-CCeEEEEEEECCC-----CEEEEe--eeccCccccccccccccccceeeeeccccceeeEEECCEEE
Confidence 999999999864 4678999999984 899996 35553310 1112244677632 1 12589999
Q ss_pred EEEeeecCCccEEEEEEeCCCCCCEEc
Q 008686 197 VIIGSKINDTGLAILYRSKDFVNWTKA 223 (557)
Q Consensus 197 m~~ga~~~~~G~i~ly~S~Dl~~W~~~ 223 (557)
|++| .+.|.+++|+||++|+..
T Consensus 204 M~~g-----~~~I~la~S~Dl~~W~~~ 225 (364)
T 3qc2_A 204 MYWG-----EEHVFAATSDDLIHWTPI 225 (364)
T ss_dssp EEEC-----SSSBEEEEESSSSSEEEC
T ss_pred EEEc-----CCeEEEEeCCCcccceEc
Confidence 9986 257899999999999873
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.6e-20 Score=190.05 Aligned_cols=195 Identities=15% Similarity=0.152 Sum_probs=143.2
Q ss_pred CCccCCcceEEECCEEEEEEEEe-------cCCCeEEEEEEeCCCCcceecCCCCCCC-CCcCCCceEeeeEEEccCCeE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYK-------LWDTVVWGHSTSTDMVNWTPHDAAIYPS-QPFDANSCWSGSVTILPGGNP 130 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~-------~~g~~~Wgha~S~DlvhW~~~~~aL~P~-~~~d~~gv~SGsav~~~dg~~ 130 (557)
.+.+||+.+ .++|+||||+++. .++...|.+++|+||+||+.++.+|.+. ..|+..++|+++++.. +|++
T Consensus 10 ~~~~DP~i~-~~~g~yYl~~t~~~~~~~~~~~~~~~~~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~WAP~i~~~-~Gky 87 (307)
T 3qee_A 10 VFTADPAAL-VHKGRVYLYAGRDEAPDNTTFFVMNEWLVYSSDDMANWEAHGPGLRAKDFTWAKGDAWASQVIER-NGKF 87 (307)
T ss_dssp SEEEEEEEE-EETTEEEEEEEEECCSSSSSCCCEEEEEEEEESSSSSCEEEEEEEEGGGSTTEEEEEEEEEEEEE-TTEE
T ss_pred CccCCCceE-EECCEEEEEEccCcccCCccccccCcEEEEECCCCCCceECccccccCCCCcccCCccCceEEEE-CCEE
Confidence 356999855 5899999999987 2346899999999999999999988764 4677789999999874 9999
Q ss_pred EEEEeeecCCC--cceEEEEEEcCCCCCccceeecCCCCceEecC-CC--CCCCCccCCeEEEecCCCeEEEEEeeecCC
Q 008686 131 AVLYTGIDAGN--KQVQNLAVPKNLSDPYLKEWIKPPENPLMVPA-DQ--IDPGSFRDPTTAWIGPDKIWRVIIGSKIND 205 (557)
Q Consensus 131 ~l~YTg~~~~~--~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p-~~--~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~ 205 (557)
|||||+...+. .+.+++|+|++.. ..|++...+|++... .. ....+++||.+ |.+++|++||++|+.
T Consensus 88 ylyyt~~~~~~~~~~~i~va~s~~p~----Gpw~~~~~~pl~~~~~~~~~~~~~~~iDp~v-f~DddG~~Yl~~g~~--- 159 (307)
T 3qee_A 88 YWYVTVRHDDTKPGFAIGVAVGDSPI----GPFKDALGKALITNDMTTDTPIDWDDIDPSV-FIDDDGQAYLFWGNT--- 159 (307)
T ss_dssp EEEEEEEECTTSCSEEEEEEEESSTT----CCCEESSSSCSBCGGGCCSSCCSCCSCCCEE-EECTTSCEEEEECSS---
T ss_pred EEEEEeccCCCCCceEEEEEEECCCC----CCCEeCCCCeeEecCccccCCCCcCcccCce-EECCCCCEEEEEeCC---
Confidence 99999986432 3678999998753 479985457888531 11 11235899996 454789999999874
Q ss_pred ccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeEEEEEE
Q 008686 206 TGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGT 281 (557)
Q Consensus 206 ~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~Y~vG~ 281 (557)
+..+.--|+|+.+|......+. ....++|||.+|+.+ | +++|++|........|...+
T Consensus 160 -~i~~~~l~~d~~~~~g~~~~i~--~~~~~~EgP~i~k~~--g-------------~YyL~~s~~~~~~~~~~~s~ 217 (307)
T 3qee_A 160 -RPRYAKLKKNMVELDGPIRAIE--GLPEFTEAIWVHKYQ--D-------------NYYLSYAMGFPEKIGYAMGK 217 (307)
T ss_dssp -SCEEEEECTTSSSEEEEEEECC--CCTTEEEEEEEEECC----------------CEEEEEEETTTTEEEEEEES
T ss_pred -cEEEEEECCccccccCceEEeC--CCCCccCceEEEEEC--C-------------EEEEEEECCCCcEEEEEECC
Confidence 2222333789988864322222 245689999999987 6 89999988655556666553
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-19 Score=184.63 Aligned_cols=183 Identities=19% Similarity=0.173 Sum_probs=133.1
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCcC-------CCceEeeeEEEccCCeEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFD-------ANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d-------~~gv~SGsav~~~dg~~~ 131 (557)
-+++||+. ++++|+||||++. .+|.|++|+||+||+..+.+|.+...|+ ..++|+++++.. +|+++
T Consensus 5 ~~~~DP~i-~~~~g~yyl~~t~-----~~i~~~~S~DL~~W~~~g~~l~~~~~~~~~~~~~~~~~~wAP~v~~~-~g~~y 77 (318)
T 1gyh_A 5 VDVHDPVM-TREGDTWYLFSTG-----PGITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQH-KGLFY 77 (318)
T ss_dssp CCCSSCEE-EEETTEEEEEESE-----ETCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEEE-TTEEE
T ss_pred eecCCCEE-EEECCEEEEEECC-----CCcEEEECCCCCCccCCCcccCCCcccccccCCCcCcccccCeEEEE-CCEEE
Confidence 35789975 7789999999996 4699999999999999999998876665 478999999875 99999
Q ss_pred EEEeeecCC-CcceEEEEEEcCCCCCcc--ceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccE
Q 008686 132 VLYTGIDAG-NKQVQNLAVPKNLSDPYL--KEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGL 208 (557)
Q Consensus 132 l~YTg~~~~-~~~~q~lA~s~d~~d~~l--~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~ 208 (557)
||||+.... ..+.+++|+|++. ||.. .+|++. ++|+...+.....+++||.|+ .+++|++||++|+.. +.
T Consensus 78 lyyt~~~~~~~~~~igva~s~~~-dp~gp~~~w~~~--~~v~~~~~~~~~~~~iDp~vf-~D~dG~~Yl~~g~~~---~~ 150 (318)
T 1gyh_A 78 LYYSVSAFGKNTSAIGVTVNKTL-NPASPDYRWEDK--GIVIESVPQRDLWNAIAPAII-ADDHGQVWMSFGSFW---GG 150 (318)
T ss_dssp EEEEECCTTSCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEECTTTCSSCCCCCEEE-ECTTSCEEEEECBST---TC
T ss_pred EEEEeccCCCCcceEEEEEeCCC-CCCCCCcceecC--CcccccCCCCCCCCcccCCeE-ECCCCCEEEEeeccC---CC
Confidence 999987543 4577889999762 2211 129884 567754322234578999964 446899999998742 34
Q ss_pred EEEEEe-CC------CCCCEEccc-----cccc-CCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 209 AILYRS-KD------FVNWTKAEQ-----SLYS-TNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 209 i~ly~S-~D------l~~W~~~~~-----~~~~-~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
|.+++. +| +..|+.... .+.. .....++|||.+|+.+ | +++|++|..
T Consensus 151 i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--g-------------~yYL~~s~~ 210 (318)
T 1gyh_A 151 LKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKG--D-------------YYYLFASWG 210 (318)
T ss_dssp EEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred EEEEEeCCccccccceeecceecccCcceeecccCCCCcceeccEEEEEC--C-------------EEEEEEEeC
Confidence 677773 55 346764310 1111 1235689999999997 6 899998864
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=99.82 E-value=4.2e-19 Score=180.63 Aligned_cols=183 Identities=17% Similarity=0.159 Sum_probs=133.3
Q ss_pred CccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCcC-------CCceEeeeEEEccCCeEEE
Q 008686 60 WMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFD-------ANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 60 w~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d-------~~gv~SGsav~~~dg~~~l 132 (557)
+++||+. +.++|+||||++...+ ..+|.+++|+||+||+.++.+|.+...|+ ..++|+++++.. +|+++|
T Consensus 11 ~~~DP~i-~~~~g~yYl~~t~~~~-~~~i~i~~S~DLv~W~~~g~~l~~~~~w~~~~~~~~~~~~wAP~v~~~-~G~yyl 87 (293)
T 1uv4_A 11 LLHDPTM-IKEGSSWYALGTGLTE-ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQYY-NGKYWL 87 (293)
T ss_dssp ECSSCEE-EEETTEEEEEEECCTT-SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEEE-TTEEEE
T ss_pred cCCCCeE-EEECCEEEEEEcCCCC-CCceEEEECCCCCCccCCCccCCCCCcccccccccCCCceecceEEEE-CCEEEE
Confidence 4789974 5679999999997532 46899999999999999999988775554 368999999875 999999
Q ss_pred EEeeecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEE
Q 008686 133 LYTGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAIL 211 (557)
Q Consensus 133 ~YTg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~l 211 (557)
|||+.... +.+.+++|+|+|.. ...|++. ++++..++. ...+++||.|+ .+++|++||++|+.. +.|.+
T Consensus 88 yyt~~~~~~~~~~i~va~s~~p~---~Gpw~~~--~~~l~~~~~-~~~~~iDp~vf-~d~dG~~Yl~~g~~~---~~i~~ 157 (293)
T 1uv4_A 88 YYSVSSFGSNTSAIGLASSTSIS---SGGWKDE--GLVIRSTSS-NNYNAIDPELT-FDKDGNPWLAFGSFW---SGIKL 157 (293)
T ss_dssp EEEECCTTCSCEEEEEEEESCTT---TTCCEEE--EEEEEECTT-SSSCCCSCEEE-ECTTSCEEEEECBST---TCEEE
T ss_pred EEEecCCCCCcceEEEEECCCCC---CCCCccC--CccEecCCC-CCCCCCCCCeE-ECCCCCEEEEEEecC---CCEEE
Confidence 99987543 45678999998752 0279884 355543221 23478999964 446899999998642 34667
Q ss_pred EE-eCCCCCCEEcccccc-cCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 212 YR-SKDFVNWTKAEQSLY-STNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 212 y~-S~Dl~~W~~~~~~~~-~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
++ ++|+..+.-....+. ......++|||.+|+.+ | +++|++|..
T Consensus 158 ~~l~~d~~~~~g~~~~i~~~~~~~~~~EgP~i~k~~--g-------------~yyL~~s~~ 203 (293)
T 1uv4_A 158 TKLDKSTMKPTGSLYSIAARPNNGGALEAPTLTYQN--G-------------YYYLMVSFD 203 (293)
T ss_dssp EEECTTTCSEEEEEEEEECCTTTTTCEEEEEEEEET--T-------------EEEEEEEEE
T ss_pred EEECchhCccCCcceEEeecCCCCCccCccEEEEEC--C-------------EEEEEEEeC
Confidence 77 567765542211122 22345699999999997 6 899998874
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-19 Score=182.33 Aligned_cols=198 Identities=13% Similarity=0.157 Sum_probs=142.9
Q ss_pred CCCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEE-ccCCeEEEEEee
Q 008686 58 SSWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTI-LPGGNPAVLYTG 136 (557)
Q Consensus 58 ~gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~-~~dg~~~l~YTg 136 (557)
.-...||+. +.++|+||||++.......+|.+++|+||+||+..+.+|.+...|+..++|+++++. ..+|++|||||+
T Consensus 21 ~~~~~DP~i-~~~~g~yyl~~t~~~~~~~~i~~~~S~DLv~W~~~g~~l~~~~~~~~~~~wAP~v~~~~~~g~~yl~yt~ 99 (306)
T 3kst_A 21 YLPIADPYV-MFYNNKYYAYGTGGTTAGEGFACFSSDDLKNWKREGQALSATDSYGTWGFWAPEVYYVESKKKFYLFYSA 99 (306)
T ss_dssp SBCCEEEEE-EEETTEEEEEEESCCSSSSEEEEEEESSSSEEEEEEEEEEGGGSSCSSCCEEEEEEEETTTTEEEEEEEE
T ss_pred cccCCCCEE-EEECCEEEEEEecCCcCCCCEEEEEeCCccccEECceecCCCCcccccccccCeEEEECCCCEEEEEEEC
Confidence 335779975 567999999999763234689999999999999999999887778888999999864 348999999998
Q ss_pred ecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEE-eC
Q 008686 137 IDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYR-SK 215 (557)
Q Consensus 137 ~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~-S~ 215 (557)
. +.+++|+|++.. ..|++....|++. .+.+||.+ |.+++|++||+++...++. .|.+.+ |+
T Consensus 100 ~-----~~i~va~s~~p~----Gpw~~~~~~p~~~-------~~~iDp~v-f~D~dG~~Yl~~~~~~~g~-~i~~~~ls~ 161 (306)
T 3kst_A 100 E-----EHICVATSTTPE----GPFRQEVKQPIWS-------EKSIDTSL-FIDDDGTPYLYFVRFTDGN-VIWVAQMTD 161 (306)
T ss_dssp T-----TEEEEEEESSTT----CCCBCSSCCCSSS-------SCCEEEEE-EECTTSCEEEEEEEESSSE-EEEEEEBCT
T ss_pred C-----CcEEEEEcCCCC----CCcEeCCCccccC-------CCcccceE-EEeCCCCEEEEEEEeCCCC-EEEEEEeCc
Confidence 5 358899998763 4688765556653 46799995 4547899999998654333 355555 78
Q ss_pred CCCCCEEcccc-cccC------CCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCc----eeEEEEEEEec
Q 008686 216 DFVNWTKAEQS-LYST------NQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQ----QDYYTIGTYNI 284 (557)
Q Consensus 216 Dl~~W~~~~~~-~~~~------~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~----~~~Y~vG~~d~ 284 (557)
|+.+|...... +... ....++|||.+|+.+ | +++|++|..... ...|+..+ .
T Consensus 162 d~~~~~~~~~~~~~~~~~~w~~~~~~~~EgP~i~k~~--G-------------~YYL~~S~~~~~~~~y~v~~a~S~--s 224 (306)
T 3kst_A 162 DLMSIKTETLNQCIKAEVSWELLQGKVAEGPSLLKKN--G-------------VYYLIYSANHYENKGYGVGYATSD--T 224 (306)
T ss_dssp TSSCBCGGGCEEEECCCSGGGCSSSSBEEEEEEEEET--T-------------EEEEEEEESCTTSTTCEEEEEEES--S
T ss_pred ccccccCcceeeeccCCccceecCCCceecceEEEEC--C-------------EEEEEEEeCCCCCCCceEEEEEeC--C
Confidence 99998754311 1111 125699999999997 6 899999875422 23344432 2
Q ss_pred CCCeEee
Q 008686 285 TTDTYIA 291 (557)
Q Consensus 285 ~~~~F~~ 291 (557)
..+.|+.
T Consensus 225 ~~GPw~~ 231 (306)
T 3kst_A 225 PMGPWVK 231 (306)
T ss_dssp TTCCCEE
T ss_pred CCCCCEe
Confidence 3456764
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-19 Score=192.21 Aligned_cols=193 Identities=16% Similarity=0.110 Sum_probs=131.4
Q ss_pred cCCcc-eEEECCEEEEEEEEe--------cCCCeEEEEEEeC---------CCCcceecCCCCCCCC--------CcCCC
Q 008686 62 NDPNG-PMIYKGIYHFFYQYK--------LWDTVVWGHSTST---------DMVNWTPHDAAIYPSQ--------PFDAN 115 (557)
Q Consensus 62 nDPnG-~~~~~G~YHlfyq~~--------~~g~~~Wgha~S~---------DlvhW~~~~~aL~P~~--------~~d~~ 115 (557)
.||.| ++-++|..++|++.. .|....++|..|+ |+.+|+..+.++.++. .++..
T Consensus 81 qd~~g~~~~~~Gy~lvf~L~a~~~~~~~drH~~a~iglfy~k~G~~~~~s~d~~~W~~~G~vf~~~~~~~~~~~~~~~~~ 160 (496)
T 3vss_A 81 TDEDANQYSVNGWEIIFSLVADRNLGFDDRHVFAKIGYFYRPAGVPAAERPENGGWTYGGLVFKEGVTGQIFEDQSFSHQ 160 (496)
T ss_dssp ECTTCCBEEETTEEEEEEEEEETTSCGGGGGGGCEEEEEEEESSCCTTTSCTTCCCEEEEESSCTTSGGGGCSCTTCSEE
T ss_pred ECCCCCEEEECCEEEEEEEEcCCCCCCCcCcceeEEeeeeccCCcccccCcccCCcEECccccCCCCCcccccCCCccCC
Confidence 46765 566799888999975 3345678896655 5679999988776542 12333
Q ss_pred ceEeeeEEEccCCeEEEEEeeecCC--------CcceEEEEEEcCC--CCCccceeecCCCCceEecCCC--------CC
Q 008686 116 SCWSGSVTILPGGNPAVLYTGIDAG--------NKQVQNLAVPKNL--SDPYLKEWIKPPENPLMVPADQ--------ID 177 (557)
Q Consensus 116 gv~SGsav~~~dg~~~l~YTg~~~~--------~~~~q~lA~s~d~--~d~~l~~w~k~~~~Pvi~~p~~--------~~ 177 (557)
.-|||||++.+||+++||||++... ..+.|+||++... .+.....|++.+.+++|-.+.+ ..
T Consensus 161 ~eWSGSAi~~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~~ 240 (496)
T 3vss_A 161 TQWSGSARVSKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQNE 240 (496)
T ss_dssp EEEEEEEEECTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTCT
T ss_pred ceEecceEECCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhcccccc
Confidence 4699999987799999999997421 2356777764311 0111256777666666633222 23
Q ss_pred CCCccCCeEEEec-CCCeEEEEEeeecC-----------------------------------CccEEEEE--EeCCCCC
Q 008686 178 PGSFRDPTTAWIG-PDKIWRVIIGSKIN-----------------------------------DTGLAILY--RSKDFVN 219 (557)
Q Consensus 178 ~~~fRDP~V~~~~-~~g~~~m~~ga~~~-----------------------------------~~G~i~ly--~S~Dl~~ 219 (557)
..+||||+|++.. .+|.+||++.+... ..|+|.|+ +|+|+..
T Consensus 241 ~~~fRDP~vf~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~D~~~ 320 (496)
T 3vss_A 241 FFNFRDPFTFEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNKQLTE 320 (496)
T ss_dssp TCCCEEEEEECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESSTTSCC
T ss_pred ccccCCCeeEecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCCCCCc
Confidence 4689999964332 36889999866431 14677665 5789999
Q ss_pred CEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEee
Q 008686 220 WTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSL 269 (557)
Q Consensus 220 W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~ 269 (557)
|++.++++....-..|||||++|+++ | ||||+.+.
T Consensus 321 We~~~PL~~a~~v~deiErP~vf~~d--G-------------KyYLFt~s 355 (496)
T 3vss_A 321 WEFLPPILSANCVTDQTERPQIYFKD--G-------------KSYLFTIS 355 (496)
T ss_dssp EEEEEEEEEEETTBSCCEEEEEEEET--T-------------EEEEEEEE
T ss_pred cEEeCccccCCCCCCceeCCcEEEEC--C-------------EEEEEEec
Confidence 99997544444456799999999998 7 99998765
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.3e-19 Score=184.85 Aligned_cols=145 Identities=21% Similarity=0.329 Sum_probs=111.7
Q ss_pred ccCCcceEEECCEEEEEEEEe-c-----C-CCeEEEEEEeCCCCcceec-CCCCCCCCCcC-----CCceEeeeEEEccC
Q 008686 61 MNDPNGPMIYKGIYHFFYQYK-L-----W-DTVVWGHSTSTDMVNWTPH-DAAIYPSQPFD-----ANSCWSGSVTILPG 127 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~-~-----~-g~~~Wgha~S~DlvhW~~~-~~aL~P~~~~d-----~~gv~SGsav~~~d 127 (557)
+-+| ++++++|+||||||.+ . + +.++|+||+|+|++||++. .++|.|+..++ ..+|++++++..+|
T Consensus 50 v~sg-sai~~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~~~~~~~DP~v~~~~d 128 (356)
T 3taw_A 50 TFNP-AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFYPAKDNQAENECPGGTEDPRIAMTED 128 (356)
T ss_dssp EEEE-EEEEETTEEEEEEEEECSSSCSTTSSCEEECCEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTT
T ss_pred eECc-EEEEECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCCccceECCcceecCCCccccccccCCceECCEEEEECC
Confidence 4467 6788999999999999 2 1 4689999999999999985 57888887644 47999999988658
Q ss_pred CeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCcc-----CCeE----------EEecCC
Q 008686 128 GNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFR-----DPTT----------AWIGPD 192 (557)
Q Consensus 128 g~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fR-----DP~V----------~~~~~~ 192 (557)
|+++|+||+... ....+++|.|+|. .+|++. ++++.++. ..+|| |..+ +++ .+
T Consensus 129 g~y~m~yt~~~~-~~~~i~la~S~Dl-----~~W~~~--g~i~~~~~---~~~~~~~~~k~~~l~p~~~~g~p~v~k-~~ 196 (356)
T 3taw_A 129 GTYVLLYTQWNR-KVPRLAVATSKDL-----KHWTKF--GPAFEKAY---NGKFKDEATKSASLVTTLKGDKQVIAK-VN 196 (356)
T ss_dssp SCEEEEEEEECS-SCEEEEEEEESSS-----SSCEEE--EETTSSHH---HHTTTTSCCCCEEEEEEEETTEEEECC-BT
T ss_pred CEEEEEEEEeCC-CCceEEEEECCCC-----CCceEe--eeEcCCcc---ccccccccCCccEEeecccCCCceEEE-EC
Confidence 899999999763 4678899999984 899985 45554321 11233 3221 233 68
Q ss_pred CeEEEEEeeecCCccEEEEEEeCCCCCCEEc
Q 008686 193 KIWRVIIGSKINDTGLAILYRSKDFVNWTKA 223 (557)
Q Consensus 193 g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~ 223 (557)
|+|+|++|. +.|.+++|+||.+|+..
T Consensus 197 G~y~m~~g~-----~~I~la~S~Dl~~W~~~ 222 (356)
T 3taw_A 197 GKYFMYWGE-----KNVYAATSDNLIDWDPL 222 (356)
T ss_dssp TBEEEEECS-----SSBEEEEESSSSSCEEC
T ss_pred CEEEEEeCC-----ceeeEEECCCcccCeec
Confidence 999999972 56899999999999974
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=99.78 E-value=4.1e-18 Score=175.03 Aligned_cols=181 Identities=19% Similarity=0.180 Sum_probs=130.1
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCcC--------CCceEeeeEEEccCCeE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFD--------ANSCWSGSVTILPGGNP 130 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d--------~~gv~SGsav~~~dg~~ 130 (557)
.+++||+ +++++|+||||++. .+|.|++|+||+||+..+.+|.+...|+ ..++|+++++.. +|++
T Consensus 22 ~~~~DP~-i~~~~g~yYl~~t~-----~~i~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~~~wAP~v~~~-~g~y 94 (314)
T 3cu9_A 22 LWAHDPV-IAKEGSRWYVFHTG-----SGIQIKTSEDGVHWENMGWVFPSLPDWYKQYVPEKDEDHLWAPDICFY-NGIY 94 (314)
T ss_dssp CBCSSCE-EEEETTEEEEEESE-----ETSEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEEE-TTEE
T ss_pred cCcCCCE-EEEECCEEEEEECC-----CCeeEEECcCCCCccCCCcccCCcchhhhccCCCcccCceecCcEEEE-CCEE
Confidence 4589997 57789999999995 4699999999999999999998876665 478999999875 9999
Q ss_pred EEEEeeecCC-CcceEEEEEEcCCCCCcc--ceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCcc
Q 008686 131 AVLYTGIDAG-NKQVQNLAVPKNLSDPYL--KEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTG 207 (557)
Q Consensus 131 ~l~YTg~~~~-~~~~q~lA~s~d~~d~~l--~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G 207 (557)
+||||+.... ..+.+++|+|++. +|.. .+|++. ++++..+.. ...+.+||.|+ .+++|++||++|+.. +
T Consensus 95 ylyyt~~~~~~~~~~igva~s~~~-dP~gp~~~w~~~--~~~~~~~~~-~~~~~iDp~vf-~D~dG~~Yl~~g~~~---~ 166 (314)
T 3cu9_A 95 YLYYSVSTFGKNTSVIGLATNQTL-DPRDPDYEWKDM--GPVIHSTAS-DNYNAIDPNVV-FDQEGQPWLSFGSFW---S 166 (314)
T ss_dssp EEEEEECCTTCCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEECTT-SSSCCCSCEEE-ECTTSCEEEEECBST---T
T ss_pred EEEEEeccCCCCCceEEEEEeCCC-CCCCCCcCcccC--CeEecCCCC-CCCCccCCCeE-EcCCCCEEEEEeccC---C
Confidence 9999987543 4577899998762 2211 139884 467654322 23468999964 446899999998742 3
Q ss_pred EEEEEEe-CCCCC----CEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 208 LAILYRS-KDFVN----WTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 208 ~i~ly~S-~Dl~~----W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
.|.+++. +|... |+.. .+........++|||.+|+.+ | +++|++|..
T Consensus 167 ~i~~~~l~~d~~~~~~~~~~~-~~~~~~~~~~~~EgP~i~k~~--G-------------~yyL~~s~~ 218 (314)
T 3cu9_A 167 GIQLIQLDTETMKPAAQAELL-TIASRGEEPNAIEAPFIVCRN--G-------------YYYLFVSFD 218 (314)
T ss_dssp CEEEEECCTTTCSCCTTCCCE-EEECCSSSSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred cEEEEEECcccCcccCCCceE-EecccCCCCCccCccEEEEEC--C-------------EEEEEEEcC
Confidence 4667774 44322 3211 111112235689999999997 6 899998864
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=5.4e-15 Score=162.41 Aligned_cols=197 Identities=15% Similarity=0.196 Sum_probs=136.4
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCcC------CCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFD------ANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d------~~gv~SGsav~~~dg~~~l 132 (557)
|+.+||+ +++++|+||||++...+ ...|.+++|+||+||+..+.+|.+...++ ..++|+++++. .+|++||
T Consensus 12 g~~~DP~-i~~~~~~yY~~~s~~~~-~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~wAP~i~~-~~g~~yl 88 (528)
T 1yrz_A 12 GFHPDPS-IVRVGDDYYIATSTFEW-FPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSY-HDGTFYL 88 (528)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE-ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETTEEEE
T ss_pred CCCCCCe-EEEECCEEEEEEccCcc-CCCeEEEECCCccCceECccccCCcccccccCCCCCCCEECCeEEE-ECCEEEE
Confidence 6899997 68899999999986532 24689999999999999998887654332 46899999987 4999999
Q ss_pred EEeeecC-C---CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEE---EeeecC-
Q 008686 133 LYTGIDA-G---NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVI---IGSKIN- 204 (557)
Q Consensus 133 ~YTg~~~-~---~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~---~ga~~~- 204 (557)
|||+... . +.+.+++|+|+|.. ..|++ |+.. ....+||.+++ +++|++||+ ++++..
T Consensus 89 ~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~------~~~~iDp~vf~-D~dG~~Yl~~~~~~~~~~~ 153 (528)
T 1yrz_A 89 IYTDVKQWHGAFKDAHNYLVTAQNIE----GPWSD----PIYL------NSSGFDPSLFH-DDDGRKWLVNMIWDYRKGN 153 (528)
T ss_dssp EEEEEEECSSSCCEEEEEEEEESSSS----SCCCC----CEEC------CCSCSCCEEEE-CTTSCEEEEEEEECCCTTS
T ss_pred EEecccCCCCCcccceEEEEEeCCCC----CCccc----cEEC------CCCcCCCceEE-CCCCCEEEEEeeccCCCCC
Confidence 9997642 1 23458899998753 35875 4432 13679999654 478999999 555432
Q ss_pred -CccEEEEEE-eCCCCCCEEccc--ccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCc---eeEE
Q 008686 205 -DTGLAILYR-SKDFVNWTKAEQ--SLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQ---QDYY 277 (557)
Q Consensus 205 -~~G~i~ly~-S~Dl~~W~~~~~--~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~---~~~Y 277 (557)
..+.|.+++ ++|. ++..+. .+.......++|||.+|+.+ | +++|++|..... ...|
T Consensus 154 ~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~~g~~~~~~~~~ 216 (528)
T 1yrz_A 154 HPFAGIILQEYSEAE--QKLVGPVKNIYKGTDIQLTEGPHLYKKD--G-------------YYYLLVAEGGTEYEHAATL 216 (528)
T ss_dssp CSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESCSSTTCEEEE
T ss_pred CCCCeEEEEEECCcc--CCCCCCCEEEEcCCCCCccCCCEEEEEC--C-------------EEEEEEeCCCCCCCcEEEE
Confidence 245688888 4554 444443 23333345689999999997 6 899998874322 2334
Q ss_pred EEEEEecCCCeEeec
Q 008686 278 TIGTYNITTDTYIAE 292 (557)
Q Consensus 278 ~vG~~d~~~~~F~~~ 292 (557)
+..+ ...++|+..
T Consensus 217 ~rs~--~~~GP~~~~ 229 (528)
T 1yrz_A 217 ARSQ--SIDGPYETD 229 (528)
T ss_dssp EEES--STTCCCEEC
T ss_pred EEEC--CCCCCCCcC
Confidence 4432 234566543
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=8.5e-16 Score=160.57 Aligned_cols=122 Identities=20% Similarity=0.323 Sum_probs=97.8
Q ss_pred cceecC---CCCCCCC------------CcCCCceEeeeEEEccCCeEEEEEeeecCC------CcceEEEEEEcCCCCC
Q 008686 98 NWTPHD---AAIYPSQ------------PFDANSCWSGSVTILPGGNPAVLYTGIDAG------NKQVQNLAVPKNLSDP 156 (557)
Q Consensus 98 hW~~~~---~aL~P~~------------~~d~~gv~SGsav~~~dg~~~l~YTg~~~~------~~~~q~lA~s~d~~d~ 156 (557)
-|++.+ ++|.|.. .||..+||+|+|+.. +|+++||||++... +.+.|++|+|+|+
T Consensus 16 pf~R~~~~nPIl~p~~~~~~~~~~~~~~~~D~~gv~sgsai~~-dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dg--- 91 (356)
T 3taw_A 16 GFERPTGVNPVIKPLPTKFYCPMREDSVAWEESDTFNPAATIY-DGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDG--- 91 (356)
T ss_dssp CCBCCTTTCCSBCCCCCEEEETTTTEEEETTSSEEEEEEEEEE-TTEEEEEEEEECSSSCSTTSSCEEECCEEESSS---
T ss_pred ceeeCCCCCCeEccCCccccCcccccCCccccCCeECcEEEEE-CCEEEEEEEEEcCCCccCCCceeEEEEEEeCCC---
Confidence 366653 5798876 689999999999984 99999999998753 4578999999985
Q ss_pred ccceeecCCCCceEecCCCCC-----CCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEccccc
Q 008686 157 YLKEWIKPPENPLMVPADQID-----PGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSL 227 (557)
Q Consensus 157 ~l~~w~k~~~~Pvi~~p~~~~-----~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~ 227 (557)
++|+|.+ +||+.+.+..+ ..++|||+|++. ++|+|+|++++..+..+++.+|+|+||.+|++.+.++
T Consensus 92 --i~w~~~~-~pvl~p~~~~~~~~~~~~~~~DP~v~~~-~dg~y~m~yt~~~~~~~~i~la~S~Dl~~W~~~g~i~ 163 (356)
T 3taw_A 92 --IHFERDT-KPAFYPAKDNQAENECPGGTEDPRIAMT-EDGTYVLLYTQWNRKVPRLAVATSKDLKHWTKFGPAF 163 (356)
T ss_dssp --SSCEECS-SCSBCCCSSTTHHHHTTTEEEEEEEEEC-TTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETT
T ss_pred --ccceECC-cceecCCCccccccccCCceECCEEEEE-CCCEEEEEEEEeCCCCceEEEEECCCCCCceEeeeEc
Confidence 6899974 79996544422 468999996543 5889999988766567889999999999999988644
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.1e-15 Score=160.00 Aligned_cols=149 Identities=18% Similarity=0.247 Sum_probs=113.3
Q ss_pred ccCCcceEEECCEEEEEEEEe--c-----CCCeEEEEEEeCCCCcceecCC-CCCCC------------------CCcCC
Q 008686 61 MNDPNGPMIYKGIYHFFYQYK--L-----WDTVVWGHSTSTDMVNWTPHDA-AIYPS------------------QPFDA 114 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~--~-----~g~~~Wgha~S~DlvhW~~~~~-aL~P~------------------~~~d~ 114 (557)
+.+|. +++++|+|||||+.+ . .+...|++|+|+|+. |++++. .+.|. ..||.
T Consensus 170 v~aPs-Vi~~dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~DG~-W~~~~~pli~~~~~~~~~~e~d~~~~~~~~~~wd~ 247 (408)
T 3p2n_A 170 VFTVE-IMKWEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPDGP-WTKSEEPILSPADNGVWKGEEQDRFAVIKKGDFDS 247 (408)
T ss_dssp EEEEE-EEEETTEEEEEEEEECSSCCTTCCCEEEEEEESSTTCC-CEECSSCSBCCCSCCEECSSSCCTTCEEECCSTTS
T ss_pred eEeeE-EEEECCEEEEEEEeecCCCCCcCCCceEEEEEECCCCC-EEECCcceeCCCCCceEEEecCCcccccccceecC
Confidence 55785 778999999999986 1 246789999999998 999754 44553 46787
Q ss_pred CceEeeeEEEccCCeEEEEEeeecCC-------CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEE
Q 008686 115 NSCWSGSVTILPGGNPAVLYTGIDAG-------NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTA 187 (557)
Q Consensus 115 ~gv~SGsav~~~dg~~~l~YTg~~~~-------~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~ 187 (557)
.+++.++++. .+|+++|+|++...+ ....+++|+|+|.. ..|+|.+.+||+... .||+ +
T Consensus 248 ~~v~~P~v~~-~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~----Gpw~k~~~nPVl~~~--------~dp~-V 313 (408)
T 3p2n_A 248 HKVHDPCIIP-YKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPK----GPYVKSPYNPISNSG--------HEIC-V 313 (408)
T ss_dssp SEEEEEEEEE-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT----CCCEECTTCCSCSSC--------SSCC-E
T ss_pred CCeEcceEEE-ECCEEEEEEEcccCccccccCCCccEEEEEEECCCC----CCcEECCCCCcccCC--------CCCe-e
Confidence 8899999887 499999999998631 24778999998853 479998778998522 3798 5
Q ss_pred EecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccccc
Q 008686 188 WIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLY 228 (557)
Q Consensus 188 ~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~ 228 (557)
|++++|.|+|+ + .++.|.+.+++|+|+.+|.+.+.+..
T Consensus 314 w~~~dG~y~mi-~--~~g~gh~~i~~S~Dg~~W~~~~~i~~ 351 (408)
T 3p2n_A 314 WPYNGGIASLI-T--TDGPEKNTIQWAPDGINFEIKSVIPG 351 (408)
T ss_dssp EEETTEEEEEE-C--SSSTTCSEEEEESSSSCCEEEEECSC
T ss_pred EecCCCEEEEE-E--ECCCCcEEEEECCCCCEEEEEeeccc
Confidence 77567777776 3 23445556799999999999986543
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=2.6e-14 Score=155.46 Aligned_cols=182 Identities=15% Similarity=0.198 Sum_probs=129.9
Q ss_pred CccCCcceEEECCEEEEEEEEec--------------CCCeEEEEEEeCCCCcceecCCCCCCC----------CCcCCC
Q 008686 60 WMNDPNGPMIYKGIYHFFYQYKL--------------WDTVVWGHSTSTDMVNWTPHDAAIYPS----------QPFDAN 115 (557)
Q Consensus 60 w~nDPnG~~~~~G~YHlfyq~~~--------------~g~~~Wgha~S~DlvhW~~~~~aL~P~----------~~~d~~ 115 (557)
+..||. +++++|+||||..+.. .....|.+++|+||+||+.++.+|.+. ..|. .
T Consensus 21 ~~~DP~-i~~~~g~yYly~t~~~~~~~~~g~~~~~~~~~~~~i~i~~S~DLv~W~~~g~v~~~~~~~~~~g~~~~~w~-~ 98 (487)
T 3c7f_A 21 LGADPV-ALTYNGRVYIYMSSDDYEYNSNGTIKDNSFANLNRVFVISSADMVNWTDHGAIPVAGANGANGGRGIAKWA-G 98 (487)
T ss_dssp CCEEEE-EEEETTEEEEEEECCCCEECTTSCEECCCSTTCCSEEEEEESSSSSEEEEEEECCBCSTTGGGGTCSBTTC-S
T ss_pred cCCCCC-eEEECCEEEEEEcCCcccccccccccccccccccceEEEECCCCcCcEEccccccCCcccccccccccCcc-c
Confidence 578995 5678999999999741 124679999999999999998887665 2343 4
Q ss_pred ceEeeeEEEc-cC--CeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecC-CCCC-CCCccCCeEEEec
Q 008686 116 SCWSGSVTIL-PG--GNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPA-DQID-PGSFRDPTTAWIG 190 (557)
Q Consensus 116 gv~SGsav~~-~d--g~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p-~~~~-~~~fRDP~V~~~~ 190 (557)
++|+++++.. .| |++|||||... +.+++|+|+|.. ..|++....|++... ++.. ....+||.|++.
T Consensus 99 ~~WAP~v~~~~~~g~g~yylyyt~~~----~~i~va~s~~p~----Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~D- 169 (487)
T 3c7f_A 99 ASWAPSIAVKKINGKDKFFLYFANSG----GGIGVLTADSPI----GPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFVD- 169 (487)
T ss_dssp CCEEEEEEEEEETTEEEEEEEEESTT----BCEEEEEESSTT----CCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEEC-
T ss_pred cCcchheEEEecCCCCeEEEEEEcCC----cEEEEEEeCCCC----CCcccCCCCeEeecCCCCccCCCCccCCceEEc-
Confidence 7999999863 13 69999999642 568999998863 358875456887532 2221 246799996544
Q ss_pred CCCeEEEEEeeecC-----------CccEEEEE-EeCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccC
Q 008686 191 PDKIWRVIIGSKIN-----------DTGLAILY-RSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIG 258 (557)
Q Consensus 191 ~~g~~~m~~ga~~~-----------~~G~i~ly-~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~ 258 (557)
++|++||++|+... ....+.+. -++|+..|......+. ...+.|+|.+++.+ |
T Consensus 170 ddG~~Yl~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~g~~~~i~---~p~~~Egp~i~k~~--G---------- 234 (487)
T 3c7f_A 170 DDGTGYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPDMTSVVGSASTID---APFMFEDSGLHKYN--G---------- 234 (487)
T ss_dssp TTSCEEEEEECCCSSTTSCCHHHHHCCCCEEEEEECTTSSSEEEEEEEEC---CTTEEEEEEEEEET--T----------
T ss_pred CCCCEEEEECCcccCccccccccccCCCceEEEEECCCeeeccCccEEec---CCceEecceEEEEC--C----------
Confidence 68999999987421 11234454 4789999976432222 23579999999997 6
Q ss_pred CceeEEEEEeec
Q 008686 259 PNIKHVLKVSLS 270 (557)
Q Consensus 259 ~~~~~vl~~s~~ 270 (557)
+++|++|..
T Consensus 235 ---~YYl~ys~~ 243 (487)
T 3c7f_A 235 ---TYYYSYCIN 243 (487)
T ss_dssp ---EEEEEEEEC
T ss_pred ---EEEEEEECC
Confidence 888887764
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.59 E-value=2e-14 Score=152.68 Aligned_cols=191 Identities=17% Similarity=0.180 Sum_probs=135.2
Q ss_pred cCCcceEEECCEEEEEEEEe---cCCCeEEEEEEeCCCCcceecCCCCCCCCC--cCC-CceEeeeEEEc-cCCeEEEEE
Q 008686 62 NDPNGPMIYKGIYHFFYQYK---LWDTVVWGHSTSTDMVNWTPHDAAIYPSQP--FDA-NSCWSGSVTIL-PGGNPAVLY 134 (557)
Q Consensus 62 nDPnG~~~~~G~YHlfyq~~---~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~--~d~-~gv~SGsav~~-~dg~~~l~Y 134 (557)
-|| ++++++|+||||.++. ......|.+++|+||+||+.++.+|.+... +.. .++|.+.++.. .+|++||||
T Consensus 25 HDP-sIi~~~g~YYly~T~~~~~~~~~~gi~v~sS~DLvnW~~~G~aL~~~~~~~~~~~~~~WAP~V~y~~~dGkYYLyy 103 (441)
T 3nqh_A 25 HGA-CIVEENGRYYLFGEYKSDKSNAFPGFSCYSSDDLVNWKFERVVLPMQSSGILGPDRVGERVKVMKCPSTGEYVMYM 103 (441)
T ss_dssp EEE-EEEEETTEEEEEEECCCSSCSSCCCEEEEEESSSSSCEEEEEEECCCSSSTTSTTEEEEEEEEEECTTTCCEEEEE
T ss_pred cCC-EEEEECCEEEEEEEcCCccCCCCCCeeEEECCCCCCcEECceeeccCCccccCCCCccCCceeEEEccCCEEEEEE
Confidence 489 6899999999999976 223578999999999999999998877653 332 35799999863 489999999
Q ss_pred eeecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEE
Q 008686 135 TGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYR 213 (557)
Q Consensus 135 Tg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~ 213 (557)
|+.... +.+.+++|+|++.. ..|+. .+|++.... ....+||.++ .+++|++||++|+ +.| ++
T Consensus 104 t~~~~~~~~~~igVAtSdsP~----GPwt~--~gpl~~~g~---~~~~IDPsvF-~DdDGk~YL~~g~-----~~I--~e 166 (441)
T 3nqh_A 104 HADDMNYKDPHIGYATCSTIA----GEYKL--HGPLLYEGK---PIRRWDMGTY-QDTDGTGYLLLHG-----GIV--YR 166 (441)
T ss_dssp EEEETTSCSCEEEEEEESSTT----SCCEE--EEECEETTE---ECCCCSEEEE-ECTTSCEEEEEGG-----GEE--EE
T ss_pred EeCCCCCCcceEEEEEeCCCC----CCceE--cceeecCCC---cccccCceEE-EeCCCCEEEEeCC-----CcE--EE
Confidence 987642 35778999998764 35775 357774321 1256899964 5578999999985 333 44
Q ss_pred -eCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC---CceeEEEEEEEecCCCeE
Q 008686 214 -SKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN---YQQDYYTIGTYNITTDTY 289 (557)
Q Consensus 214 -S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~---~~~~~Y~vG~~d~~~~~F 289 (557)
++|+.++.-....+. .+...|||.+|+.+ | +++|++|... .....|...+ ...++|
T Consensus 167 Ls~D~~~~~g~~~~i~---~g~~~EgP~i~K~~--G-------------~YYL~~S~~~g~~~~~~~~arS~--s~~GPw 226 (441)
T 3nqh_A 167 LSKDYRTAEEKVVSGV---GGSHGESPAMFKKD--G-------------TYFFLFSNLTSWEKNDNFYFTAP--SVKGPW 226 (441)
T ss_dssp ECTTSSSEEEEEESCS---TTCCCEEEEEEEET--T-------------EEEEEEECSCTTSCCCCEEEEES--STTCCC
T ss_pred eCCccccccCceEEeC---CCCceECcEEEEEC--C-------------EEEEEEeCCCCcCCCceEEEEeC--CCCCCc
Confidence 688888864322222 24578999999987 6 8999988632 1233455443 334566
Q ss_pred e
Q 008686 290 I 290 (557)
Q Consensus 290 ~ 290 (557)
+
T Consensus 227 ~ 227 (441)
T 3nqh_A 227 T 227 (441)
T ss_dssp E
T ss_pred e
Confidence 5
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=4.3e-14 Score=155.40 Aligned_cols=178 Identities=13% Similarity=0.158 Sum_probs=126.9
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCc------CCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPF------DANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~------d~~gv~SGsav~~~dg~~~l 132 (557)
|++.||+ +++++|.||||++...|. ..|.+++|+||+||+..+.+|.+...+ ...++|+++++. .+|++||
T Consensus 10 g~~~DP~-ii~~~~~yY~~~s~~~~~-~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~g~~yl 86 (533)
T 1yif_A 10 GFNPDPS-ICRAGEDYYIAVSTFEWF-PGVQIHHSKDLVNWHLVAHPLQRVSQLDMKGNPNSGGVWAPCLSY-SDGKFWL 86 (533)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTEE-SBCEEEEESSSSSEEEEECSBCSTTTCCCTTCCTTCBBCSCEEEE-ETTEEEE
T ss_pred CCCCCCe-EEEECCEEEEEEecCCCC-CCeEEEEeCCCCCCeECCccccCcccccccCCCCCCCEECceEEE-ECCEEEE
Confidence 6789997 678899999998865332 358999999999999999888765422 246899999987 4999999
Q ss_pred EEeeecCC----CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec--C--
Q 008686 133 LYTGIDAG----NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI--N-- 204 (557)
Q Consensus 133 ~YTg~~~~----~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~--~-- 204 (557)
|||+.... ....+++|+|+|.. ..|++ |+.-. ...+||.+++. ++|++||+++... .
T Consensus 87 ~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~------~~~iDp~~f~D-~dG~~Yl~~~~~~~~~g~ 151 (533)
T 1yif_A 87 IYTDVKVVDGAWKDCHNYLVTCETIN----GDWSE----PIKLN------SSGFDASLFHD-TDGKKYLLNMLWDHRIDR 151 (533)
T ss_dssp EEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEEC-TTSCEEEEEEEECCCTTS
T ss_pred EEEeccCCCCCcccccEEEEEeCCCC----CCccc----cEEcC------CCcCCCceEEC-CCCCEEEEEEecccccCC
Confidence 99986531 23567899998753 35875 44321 24689996544 7899999988532 1
Q ss_pred -CccEEEEEE-eCCCCCCEEccc--ccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 205 -DTGLAILYR-SKDFVNWTKAEQ--SLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 205 -~~G~i~ly~-S~Dl~~W~~~~~--~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
..+.|.+++ ++|+. +..+. .+.......++|||.+|+.+ | +++|++|...
T Consensus 152 ~~~~~i~~~~l~~d~~--~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~gg 205 (533)
T 1yif_A 152 HSFGGIVIQEYSDKEQ--KLIGKPKVIFEGTDRKLTEAPHLYHIG--N-------------YYYLLTAEGG 205 (533)
T ss_dssp CSEEEEEEEEEETTTT--EECSCCEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CCCCCEEEEEECCccC--CCCCCcEEEEcCCCCCccccceEEEEC--C-------------EEEEEEeCCC
Confidence 124577777 56653 33332 23333344589999999997 6 8889888643
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.1e-14 Score=151.14 Aligned_cols=121 Identities=11% Similarity=0.146 Sum_probs=100.0
Q ss_pred CCCCcceecCCCCCCCC-CcCCCceEeeeEEEccCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEec
Q 008686 94 TDMVNWTPHDAAIYPSQ-PFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP 172 (557)
Q Consensus 94 ~DlvhW~~~~~aL~P~~-~~d~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~ 172 (557)
..+++|+..| +|.|+. +| ..|||+++|+.. +|+++|||++....+...+++|+|+|+ .+|++.+ +|++.+
T Consensus 34 ~~~~r~~~~P-iL~p~~~~~-~~gv~n~~~i~~-~g~~~lfY~~~~~~~~~~~~~A~S~Dg-----i~w~~~~-~pvl~p 104 (338)
T 1vkd_A 34 GPVWRYSKNP-IIGRNPVPK-GARVFNSAVVPY-NGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQWV 104 (338)
T ss_dssp SSEEECTTCC-SBCBSCSTT-EEEEEEEEEEEE-TTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCEE
T ss_pred CceEECCCCc-eECCCCCcc-cCeEEccEEEEE-CCEEEEEEEEECCCCcEEEEEEEeCCC-----CccEECC-CCEEeC
Confidence 3578888767 799985 77 789999999885 999999999987767789999999985 6999964 788865
Q ss_pred C--CCCCCCCcc-CCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccc
Q 008686 173 A--DQIDPGSFR-DPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQS 226 (557)
Q Consensus 173 p--~~~~~~~fR-DP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~ 226 (557)
. ..++..++| ||+|+ + .+++|||++++ ....+++.+|+|+|+.+|++.+.+
T Consensus 105 ~~~~~~~~~g~~yDP~v~-~-~~d~yym~yt~-~~~~~~i~la~S~Dl~~W~~~~~i 158 (338)
T 1vkd_A 105 DVNGEPFQPSYAYDPRVV-K-IEDTYYITFCT-DDHGPTIGVGMTKDFKTFVRLPNA 158 (338)
T ss_dssp CTTSCBCCCSSEEEEEEE-E-ETTEEEEEEEE-ESSSEEEEEEEESSSSSEEEECCS
T ss_pred CCCCccccCCEEeCcEEE-E-ECCEEEEEEEE-cCCcceEEEEEECCCCeEEECCcc
Confidence 4 445678999 99965 4 36799999998 656678999999999999998643
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=7.3e-14 Score=153.68 Aligned_cols=178 Identities=14% Similarity=0.147 Sum_probs=128.2
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCc------CCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPF------DANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~------d~~gv~SGsav~~~dg~~~l 132 (557)
|+..||+ +++++|+||||++...| ...|.+++|+||+||+..+.+|.+...+ +..++|+++++. .+|++||
T Consensus 11 g~~~DP~-i~~~~~~yY~~~s~~~~-~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~g~~yl 87 (535)
T 2exh_A 11 GFHPDPS-ICRVGDDYYIAVSTFEW-FPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSY-SDGKFWL 87 (535)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE-ESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEEE-ETTEEEE
T ss_pred CCCCCCE-EEEECCEEEEEECCCCC-CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-ECCEEEE
Confidence 6899996 67889999999886422 2468999999999999999888765322 347899999987 4999999
Q ss_pred EEeeecCC----CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC----
Q 008686 133 LYTGIDAG----NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN---- 204 (557)
Q Consensus 133 ~YTg~~~~----~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~---- 204 (557)
|||+.... ....+++|+|+|.. ..|++ |+... ...+||.+++. ++|++||+++....
T Consensus 88 yyt~~~~~~g~~~~~~~~va~s~~~~----Gpw~~----p~~~~------~~~iDp~vf~D-ddG~~Yl~~~~~~~~~~~ 152 (535)
T 2exh_A 88 IYTDVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYLN------SSGFDPSLFHD-EDGRKYLVNMYWDHRVDH 152 (535)
T ss_dssp EEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEEC-TTSCEEEEEEEECCCTTS
T ss_pred EEEeccCCCCCccccceEEEEeCCCC----CCccc----cEecC------CCcCCCceEEC-CCCCEEEEEEecCCccCC
Confidence 99986531 23567899998753 35875 44321 25699996544 68999999885321
Q ss_pred -CccEEEEEE-eCCCCCCEEccc--ccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 205 -DTGLAILYR-SKDFVNWTKAEQ--SLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 205 -~~G~i~ly~-S~Dl~~W~~~~~--~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
..+.|.+++ +.|+ |+..++ .+........+|||.+|+.+ | +++|++|...
T Consensus 153 ~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~gg 206 (535)
T 2exh_A 153 HPFYGIVLQEYSVEQ--KKLVGEPKIIFKGTDLRITEGPHLYKIN--G-------------YYYLLTAEGG 206 (535)
T ss_dssp CSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CCCCcEEEEEECCcc--CCCCCCcEEEEcCCCCCccccceEEEEC--C-------------EEEEEEeCCC
Confidence 124577777 4564 555443 23333344589999999997 6 8889888643
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.1e-14 Score=152.19 Aligned_cols=123 Identities=17% Similarity=0.330 Sum_probs=98.1
Q ss_pred CcceecCCCCCCCC-------------CcCCCceEeeeEEEccCCeEEEEEeeecCC------CcceEEEEEEcCCCCCc
Q 008686 97 VNWTPHDAAIYPSQ-------------PFDANSCWSGSVTILPGGNPAVLYTGIDAG------NKQVQNLAVPKNLSDPY 157 (557)
Q Consensus 97 vhW~~~~~aL~P~~-------------~~d~~gv~SGsav~~~dg~~~l~YTg~~~~------~~~~q~lA~s~d~~d~~ 157 (557)
++|+...++|.|+. .||..+||+|+|+.. +|+++||||++... +.+.+++|+|+|+
T Consensus 20 ~r~~~~~Pil~p~~~~~~~~~~~~~~~~wD~~gvfnp~ai~~-dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DG---- 94 (364)
T 3qc2_A 20 ERPKNVNPVISPIENTKFYCPLTKDSIAWESNDTFNPAATLY-NGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDG---- 94 (364)
T ss_dssp BCCTTTCCSBCCCSSCCEEETTTTEEECTTSSEEEEEEEEEE-TTEEEEEEEEECSSSSSTTCSCEEEEEEEESSS----
T ss_pred eeCCCCCCeEecCCcccccccccccccccccCceECceEEEE-CCEEEEEEEEECCCCcccCCCceEEEEEEeCCC----
Confidence 34444356899986 789999999999975 99999999998753 4578999999985
Q ss_pred cceeecCCCCceEecCCCCCC-----CCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEccccc
Q 008686 158 LKEWIKPPENPLMVPADQIDP-----GSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSL 227 (557)
Q Consensus 158 l~~w~k~~~~Pvi~~p~~~~~-----~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~ 227 (557)
++|++. .+||+.+....+. .++|||+|+ ..++|+|+|++++.....+++.+++|+|+++|++.+.++
T Consensus 95 -i~w~~~-~~Pvl~P~~~~~~~~e~~~gv~DP~v~-~~edG~yym~Yta~~~~~~~i~lA~S~Dl~~W~k~g~i~ 166 (364)
T 3qc2_A 95 -THFQRE-KTPVFYPDNDSQKELEWPGGCEDPRIA-VTDDGLYVMMYTQWNRHVPRLAVATSRNLKDWTKHGPAF 166 (364)
T ss_dssp -SSCEEC-SSCSBCCCSSTTHHHHTTTEEEEEEEE-ECTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETT
T ss_pred -ceeeEc-CcCeEcCCCccccccccCCcEECCEEE-EeCCCEEEEEEEecCCCCeEEEEEEECCCCEEEEeeecc
Confidence 789996 4699866544332 579999965 435889999999876556789999999999999987543
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.1e-12 Score=137.93 Aligned_cols=150 Identities=15% Similarity=0.177 Sum_probs=107.9
Q ss_pred ccCCcceEEECCEEEEEEEEe--c---CCCeEEEEEEeCCC-CcceecC-CCCCCC------------------CCcCCC
Q 008686 61 MNDPNGPMIYKGIYHFFYQYK--L---WDTVVWGHSTSTDM-VNWTPHD-AAIYPS------------------QPFDAN 115 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~--~---~g~~~Wgha~S~Dl-vhW~~~~-~aL~P~------------------~~~d~~ 115 (557)
+-.|. +++++|+|||||..+ . ....++++|+|+|+ .+|++.+ ++|.|. ..|+..
T Consensus 125 vwaPs-vi~~dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~~Gpw~~~~~Pvi~~~~~~~w~~ddd~~~~~~~~~~~d~~ 203 (374)
T 3r4z_A 125 VFTPE-VLRHNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPFGPWTKSDAPILSPENDGVWDTDEDNRFLVKEKGSFDSH 203 (374)
T ss_dssp EEEEE-EEEETTEEEEEEEEECSSCCTTCCBEEEEEEESSTTCCCEECSSCSBCCCCCSEECSSSSCTTCEEECCSTTSS
T ss_pred EECCE-EEEECCEEEEEEEeccCCCCCCCcceEEEEEECCCCCCeEECCCCEeCCCcCCceeecCCceEEEecCCccccC
Confidence 34574 677899999999987 2 13579999999997 6999874 445443 234556
Q ss_pred ceEeeeEEEccCCeEEEEEeeecCCC-------cceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEE
Q 008686 116 SCWSGSVTILPGGNPAVLYTGIDAGN-------KQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAW 188 (557)
Q Consensus 116 gv~SGsav~~~dg~~~l~YTg~~~~~-------~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~ 188 (557)
+++.++++. .+|++||+|++...+. ...+++|+|++.. ..|+|.+.+||+.. -+||+ ||
T Consensus 204 ~~~~P~v~~-~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~----Gpw~~~~~~Pi~~~--------~~dp~-V~ 269 (374)
T 3r4z_A 204 KVHDPCLMF-FNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPL----GPYTKSEYNPITNS--------GHEVA-VW 269 (374)
T ss_dssp EEEEEEEEE-ETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTT----CCCEECTTCCCCSS--------CSSCC-EE
T ss_pred ccccceEEE-ECCEEEEEEEecCCCCccccCCCcceEEEEEECCCC----CCCEECCCCCEeCC--------CCCCc-eE
Confidence 788888887 4999999999985421 3579999998753 36999878899852 24999 57
Q ss_pred ecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccccc
Q 008686 189 IGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLY 228 (557)
Q Consensus 189 ~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~ 228 (557)
..+ ++|+++++....+.+ .++.|+|+++|++.+.+..
T Consensus 270 ~~~-~g~~~mv~~~g~~~~--~l~~S~Dg~~W~~~~~i~~ 306 (374)
T 3r4z_A 270 PYK-GGMATMLTTDGPEKN--TCQWAEDGINFDIMSHIKG 306 (374)
T ss_dssp EET-TEEEEEECSSSTTCS--EEEEETTSSSCEEEEECSC
T ss_pred EeC-CEEEEEEEecCCCce--EEEECCCcCCeEEcceecc
Confidence 744 556444453333344 5677999999999986544
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=8.1e-13 Score=145.06 Aligned_cols=183 Identities=14% Similarity=0.099 Sum_probs=126.5
Q ss_pred ccCCcceEEECCEEEEEEEEe--cCCCeEEEEEEeCCCCcceecCCCCCCCC--CcCCCceEeeeEEEc-cCCeEEEEEe
Q 008686 61 MNDPNGPMIYKGIYHFFYQYK--LWDTVVWGHSTSTDMVNWTPHDAAIYPSQ--PFDANSCWSGSVTIL-PGGNPAVLYT 135 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~--~~g~~~Wgha~S~DlvhW~~~~~aL~P~~--~~d~~gv~SGsav~~-~dg~~~l~YT 135 (557)
.-|| .+++++|+||||.... ......+..++|+||+||+..+.+|.+.. .|+..++|.+.++.. .+|++||||+
T Consensus 58 a~DP-~Ii~~~g~YY~~~T~~~~~~~~~gi~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~~WAP~v~~~~~~Gkyymy~~ 136 (526)
T 3vsf_A 58 AHGG-GMLKHGDYYYWYGEYRDDSNLFLGVSCYRSKDLVNWEYRGEVLSRNSAPELNHCNIERPKVMYNASTGEFVMWMH 136 (526)
T ss_dssp CEEE-EEEEETTEEEEEEEEECTTSSEEEEEEEEESSSSSCEEEEEEEETTSSGGGSSCEEEEEEEEECTTTCCEEEEEE
T ss_pred ccCC-eEEEECCEEEEEEecCCCCCCcCcEEEEECCCCCCcCCCCccCCCCCCcCcccCceECCEEEEECCCCEEEEEEE
Confidence 4599 5888999999999976 23347899999999999999998886654 466677999999875 3899999999
Q ss_pred eecC--CCcceEEEEEEcCCCCCccceeecCC-CCceEec---CCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEE
Q 008686 136 GIDA--GNKQVQNLAVPKNLSDPYLKEWIKPP-ENPLMVP---ADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLA 209 (557)
Q Consensus 136 g~~~--~~~~~q~lA~s~d~~d~~l~~w~k~~-~~Pvi~~---p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i 209 (557)
.... .+...+++|+|++.. ..|+... ..|+... +.+......+||.+ |.+++|++||++++.. .+.|
T Consensus 137 ~~~~~~~~~~~igvats~~p~----Gpw~~~g~~~p~~~~g~~~~~~~~~~~iDp~v-f~D~dG~~Yl~~~~~~--~~~i 209 (526)
T 3vsf_A 137 WENGINYGQARAAVAYSKTPD----GKFTYIRSFRPMQDTGVMDHGLPGYMSRDCNV-FVDTDGKGYFISAANE--NMDL 209 (526)
T ss_dssp EECSSCSCCCEEEEEEESSSS----SCCEEEEEECSSCTTCCEETTEESCCCCSEEE-EECTTSCEEEEEEETT--TTEE
T ss_pred eeCCCCCCcceEEEEEcCCCC----CCCEeccccccccccccccCCCCCcccccccE-EECCCCCEEEEEEecC--CCce
Confidence 6521 135788999998864 3466421 1233210 01111245699996 4547899999998642 2345
Q ss_pred EEEE-eCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEee
Q 008686 210 ILYR-SKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSL 269 (557)
Q Consensus 210 ~ly~-S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~ 269 (557)
.+++ ++|+..+......+. .+...|+|.+|+.+ | +|+|++|.
T Consensus 210 ~i~~l~~d~~~~~~~~~~~~---~g~~~EgP~i~k~~--G-------------~YYL~~S~ 252 (526)
T 3vsf_A 210 HLYELTPDYKNIASLKAKLF---VGQQREAPCLIKRN--G-------------YYYLITSG 252 (526)
T ss_dssp EEEEECTTSSSEEEEEEEES---TTSCCEEEEEEESS--S-------------CEEEEEEC
T ss_pred EEEEcCCCcccccCceEEeC---CCCCcCCeEEEEEC--C-------------EEEEEEcC
Confidence 5666 466666543222122 23568999999987 6 88888884
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.39 E-value=9.2e-12 Score=131.91 Aligned_cols=150 Identities=21% Similarity=0.261 Sum_probs=108.6
Q ss_pred ccCCcceEEECCEEEEEEEEe-c----CCCeEEEEEEeCC-CCcceecC-CCCCCCC------------------CcCCC
Q 008686 61 MNDPNGPMIYKGIYHFFYQYK-L----WDTVVWGHSTSTD-MVNWTPHD-AAIYPSQ------------------PFDAN 115 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~-~----~g~~~Wgha~S~D-lvhW~~~~-~aL~P~~------------------~~d~~ 115 (557)
+.+|. +++++|+|+|||..+ . .+...+|+|+|++ .-.|++.+ ++|.|.. .||..
T Consensus 165 v~aP~-Vi~~~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~Gpwt~~~~Pvl~~~~~~~W~~ddd~~~~~~~~~~wD~~ 243 (404)
T 4ak5_A 165 VFTPE-VMEWKGKYYLCYQAVKSPYTVRVKNTIGMACADSPEGLWTKTDKPVLEPSDTGEWEGDEDNRFKVVSKGDFDSH 243 (404)
T ss_dssp EEEEE-EEEETTEEEEEEEEECSCCCTTCCCEEEEEEESSTTCCCEECSSCSBCCCSCCEECSSSSCTTCEEECCSTTSS
T ss_pred EEeeE-EEEECCEEEEEEEeccCCCCCCCcceEEEEEEeCCCCCceECCCceecCCCCcceeeccCceeeeccCCcccCC
Confidence 45774 678899999999987 2 1357899999986 34899875 4455532 35667
Q ss_pred ceEeeeEEEccCCeEEEEEeeecCCC-------cceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEE
Q 008686 116 SCWSGSVTILPGGNPAVLYTGIDAGN-------KQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAW 188 (557)
Q Consensus 116 gv~SGsav~~~dg~~~l~YTg~~~~~-------~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~ 188 (557)
+++.++++. .+|++||||+|...+. .+.+++|+|++.. ..|+|.+.+||+.. + .+++ ||
T Consensus 244 ~~~~P~v~~-~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~~----Gpw~k~~~nPv~~~--~------~e~~-Vw 309 (404)
T 4ak5_A 244 KVHDPCIIP-YNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPM----GPYVKSEYNPISNS--G------HEVC-VW 309 (404)
T ss_dssp EEEEEEEEE-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT----CCCEECTTCCSCSS--C------SSCC-EE
T ss_pred cEECCEEEE-ECCEEEEEEECCCCCCccccCCCcceEEEEEECCCC----CCcEECCCCceecC--C------Ccce-EE
Confidence 899999887 4999999999986431 4689999998852 47999888999852 1 2556 68
Q ss_pred ecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccccc
Q 008686 189 IGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLY 228 (557)
Q Consensus 189 ~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~ 228 (557)
+.+++.|+|+.. ...+.| .++.|+|+++|++.+.+..
T Consensus 310 ~~~dg~~~ll~~-~g~~~g--~l~~S~Dg~~W~~~~~l~~ 346 (404)
T 4ak5_A 310 PYKGGIASLITT-DGPEKN--TLQWSPDGINFEIMSVVKG 346 (404)
T ss_dssp EETTEEEEEECS-SSTTCS--EEEEESSSSCCEEEEECSC
T ss_pred EeCCcEEEEEEe-cCCCce--EEEECCCCCeEEEeeeecc
Confidence 855554466543 223445 5777999999999986544
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=8.1e-11 Score=129.47 Aligned_cols=178 Identities=14% Similarity=0.155 Sum_probs=124.0
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCC------cCCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQP------FDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~------~d~~gv~SGsav~~~dg~~~l 132 (557)
|+..||. ++.++|.||||.....| ...+..++|+||+||+..+.+|.+... .+..++|.++++.. +|++||
T Consensus 10 ~~~~DP~-i~~~~~~yY~~~s~~~~-~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~~-~g~~yl 86 (538)
T 3c2u_A 10 GFNPDPS-IVRAGDDYYIATSTFEW-FPGVQIHHSKDLVHWHLVAHPLSTTEFLDMKGNPDSGGIWAPDLSYA-DGKFWL 86 (538)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE-ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEEE-TTEEEE
T ss_pred CCCCCCE-EEEECCEEEEEEccCCC-CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEEE-CCEEEE
Confidence 6789995 78889999998764321 235789999999999999988865431 13468999999875 999999
Q ss_pred EEeeecC-C---CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC----
Q 008686 133 LYTGIDA-G---NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN---- 204 (557)
Q Consensus 133 ~YTg~~~-~---~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~---- 204 (557)
|||.... . ..+.+++|+|+|.. ..|++ |+.-. ...+||.+++. ++|+.||+++....
T Consensus 87 y~t~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~------~~~iDp~~f~D-ddG~~Yl~~~~~~~~~~~ 151 (538)
T 3c2u_A 87 IYTDVKVVDGMWKDCHNYLTTAEDIK----GPWSK----PILLN------GAGFDASLFHD-PSGKKYLVNMYWDQRVYH 151 (538)
T ss_dssp EEEEECCCSSSCCCEEEEEEEESSTT----CCCCC----CEEEE------CSCSCCEEEEC-TTSCEEEEEEEECCCTTS
T ss_pred EEEeccCCCCCcccccEEEEEECCCC----CCccc----cEecC------CCcCCCeeEEC-CCCCEEEEEEecCCccCC
Confidence 9997653 1 23567899998753 35875 44321 13589996544 68999999875321
Q ss_pred -CccEEEEEEe-CCCCCCEEcccc--cccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 205 -DTGLAILYRS-KDFVNWTKAEQS--LYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 205 -~~G~i~ly~S-~Dl~~W~~~~~~--~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
..+.|.+.+. .|. |+..+.+ +.........|+|.+++.+ | +|+|++|...
T Consensus 152 ~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~gg 205 (538)
T 3c2u_A 152 HNFYGIALQEYSVAE--EKLIGKPEIIYKGTDIAYTEGPHLYYIN--D-------------MYYLMTAEGG 205 (538)
T ss_dssp CSEEEEEEEEEETTT--TEECSCCEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CCCCCEEEEEECCcc--CCCCCCCEEEecCCCCCccccceEEEEC--C-------------EEEEEEecCC
Confidence 1245777774 454 4544432 3333334579999999987 6 8899888753
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=99.26 E-value=7e-11 Score=127.70 Aligned_cols=179 Identities=16% Similarity=0.225 Sum_probs=115.1
Q ss_pred ccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCC--------------CcC-CCceEeeeEEEc
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQ--------------PFD-ANSCWSGSVTIL 125 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~--------------~~d-~~gv~SGsav~~ 125 (557)
.-||. +++++|+|+||... ...++|+||+||+.++.+|.+.. .|. ..++|.++++..
T Consensus 36 ~~DPs-ii~~~g~YYl~~T~-------~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~l~~~~~w~~~~~~WAP~vi~~ 107 (470)
T 2x8s_A 36 VHDPS-IIETNGTFYVFGSH-------LASAKSNDLMQWQQLTTSVSNDNPLIPNVYEELKETFEWAQSDTLWAADVTQL 107 (470)
T ss_dssp CSSCE-EEEETTEEEEECST-------TCEEEESSSSBCEEEECSCSTTCTTSTTHHHHTHHHHHHHTCSSCCCCEEEEC
T ss_pred CCCCE-EEEECCEEEEEECc-------CceEECCCcccceeccccccccccccccccccccccccccCCCceECCeEEEe
Confidence 56994 77889999997652 24689999999999987775432 122 358999999875
Q ss_pred cCCeEEEEEeeecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecC-----CC--C---CCCCccCCeEEEecCCCe
Q 008686 126 PGGNPAVLYTGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPA-----DQ--I---DPGSFRDPTTAWIGPDKI 194 (557)
Q Consensus 126 ~dg~~~l~YTg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p-----~~--~---~~~~fRDP~V~~~~~~g~ 194 (557)
.||++||||+..... ....+++|+|+|.. ..|+.. +.++.... .+ + .....+||.+++. ++|+
T Consensus 108 ~dGkyylyys~~~~~~~~~~IgvatSddp~----GPw~~~-g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~vf~D-dDG~ 181 (470)
T 2x8s_A 108 ADGKYYMYYNACRGDSPRSAMGVAVADNIE----GPYKNK-GIFLKSGMEGTSSDGTPYDATKHPNVVAPHTFFD-KDGK 181 (470)
T ss_dssp TTSCEEEEEEEECSSSCCEEEEEEEESSTT----CCCEEE-EEEEEECCSSBCTTSSBCCTTTSCCSCCCEEEEC-TTSC
T ss_pred cCCEEEEEEEeccCCCCccEEEEEEeCCCC----CCceeC-CeeeccCcccccccccccccccCCCCCCCCEEEc-CCCC
Confidence 589999999987532 34678899998763 358874 23443321 00 1 1235789996544 6899
Q ss_pred EEEEEeeecCCccEEEEEEeC-CC---CCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 195 WRVIIGSKINDTGLAILYRSK-DF---VNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 195 ~~m~~ga~~~~~G~i~ly~S~-Dl---~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
+||++|+.. |.|.+.+.+ |. ..|+..+..+. .......|.|.+|+....| +++|++|..
T Consensus 182 ~Yl~~g~~~---~gI~~~eL~~d~~~~~~~~~~~~~i~-~g~~~~~EGP~i~~~K~~G-------------~YYL~~S~g 244 (470)
T 2x8s_A 182 LWMVYGSYS---GGIFILEMNPKTGFPLPGQGYGKKLL-GGNHSRIEGPYVLYNPDTQ-------------YYYLYLSYG 244 (470)
T ss_dssp EEEEECBST---TCEEEEEBCTTTSSBCTTCTTCEEEE-CCSSCSEEEEEEEEETTTT-------------EEEEEEEES
T ss_pred EEEEeeecC---CcEEEEEECCccCcCcCCcccceEec-CCCCCceeccEEEEEccCC-------------EEEEEEEeC
Confidence 999998642 345666643 32 11211111111 1123468999999542225 889988864
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.1e-08 Score=103.08 Aligned_cols=183 Identities=13% Similarity=0.118 Sum_probs=111.8
Q ss_pred cCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCC--C-CCCCCcCCCceEeeeEEEccCCeEEEEEeeec
Q 008686 62 NDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAA--I-YPSQPFDANSCWSGSVTILPGGNPAVLYTGID 138 (557)
Q Consensus 62 nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~a--L-~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~ 138 (557)
-||. ++.+++.|+||+....+ ...+...+|+||++|+..+.. + .+...+...++|.+.++.. +|++||||+...
T Consensus 18 aDP~-ii~~~d~yY~~~st~~~-~~g~~i~~S~DL~~w~~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~G~yylyys~~~ 94 (330)
T 3k1u_A 18 ADPM-IYKHNDGYYYFTASVPE-YDRIEVRKAKTIEGLRNAEPVDVWRRHESGEMSNLIWAPEIHFI-NGAWYIYFAAAP 94 (330)
T ss_dssp EEEE-EEECTTSCEEEEEECTT-CCEEEEEEESSTGGGTTSCCEEEEECCSSSTTSEEEEEEEEEEE-TTEEEEEEEEES
T ss_pred CCCE-EEEECCEEEEEEeccCC-CCCEEEEEcCCcCCccCCcceeecccCCCCccCCCeECCEEEEE-CCeEEEEEEecc
Confidence 5995 77888899999886533 236778899999999876532 2 2233444568999999875 999999999765
Q ss_pred CC-----CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec--CCccEEEE
Q 008686 139 AG-----NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI--NDTGLAIL 211 (557)
Q Consensus 139 ~~-----~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~--~~~G~i~l 211 (557)
.. .......+++.+..+|.-..|+.. ..+.... .....||.|+ .+++++|+|+.+... ...+.|.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~gP~~~~~~~~---~~~~~~~---~~~~IDp~vf-~Ddd~~~~~~~~~~~~~~~~~~i~i 167 (330)
T 3k1u_A 95 DKNIEDDTFNHRMFVIQNENENPFTGNWVEK---GRIKTAW---ESFSLDATIF-EHNEKLYYVWAQQDINIKGHSNIYI 167 (330)
T ss_dssp SSCCBTTBCCCEEEEEEECSSSTTSSCCEEE---EECCCSS---CSCEEEEEEE-EETTEEEEEEEECCTTSSSSBEEEE
T ss_pred CCCCCCcccceeeeEEEeCCCCCcccccccc---ccccCCC---CCCccCceEE-EECCccEEEEeecCCCcCCCceEEE
Confidence 32 112234455544444433345531 1121111 1234799965 446667776655433 23345667
Q ss_pred EEeCCCCCCEEcccc--cccC------CCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 212 YRSKDFVNWTKAEQS--LYST------NQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 212 y~S~Dl~~W~~~~~~--~~~~------~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
.+.++. ++..+++ +... ......|-|-+++.+ | +++|++|...
T Consensus 168 ~~l~~~--~~~~g~~~~i~~~~~~~e~~~~~~~EGp~i~k~~--G-------------~YYL~ys~~~ 218 (330)
T 3k1u_A 168 AEMENP--WTLKTKPVMLTKPELEWEIKGFWVNEGPAVLKKN--G-------------KIFITYSASA 218 (330)
T ss_dssp EEEEET--TEECSCCEEEECSCSGGGCSSSCBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred EECCCC--ccccCCcEEecCCCccccccCCceeeCCEEEEEC--C-------------EEEEEEEeCC
Confidence 775442 4444432 1111 123456999999987 6 8999988754
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=4e-09 Score=113.99 Aligned_cols=178 Identities=13% Similarity=0.150 Sum_probs=117.8
Q ss_pred cCCcceEE-ECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCC--CC-CCCcCCCceEeeeEEEccCCeEEEEEeee
Q 008686 62 NDPNGPMI-YKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAI--YP-SQPFDANSCWSGSVTILPGGNPAVLYTGI 137 (557)
Q Consensus 62 nDPnG~~~-~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL--~P-~~~~d~~gv~SGsav~~~dg~~~l~YTg~ 137 (557)
-||. ++. .+|+|+||+.... ...+..++|+||+||+..+.++ .+ .......++|.+.++.. +|++||+|+..
T Consensus 20 ~DP~-iir~~dg~YY~~~T~~~--~~~i~i~~S~DLv~W~~~~~~~~w~~~~~~~~~~~~WAP~v~~~-~Gkyylyys~~ 95 (468)
T 3akh_A 20 ADPH-IFKHTDGYYYFTATVPE--YDRIVLRRATTLQGLATAPETTIWTKHASGVMGAHIWAPEIHFI-DGKWYVYFAAG 95 (468)
T ss_dssp EEEE-EEECTTSCEEEEEECTT--CCEEEEEEESSTGGGGGCCCEEEEECCSSSTTCEEEEEEEEEEE-TTEEEEEEEEE
T ss_pred CCCE-EEEecCCEEEEEEEeCC--CCCEEEEECCCccccccCCCcceecCCCCCCCCCCEecceEEEE-CCEEEEEEEeE
Confidence 7995 666 5999999988532 3579999999999999876433 22 12223467999999875 99999999987
Q ss_pred cCCC--cceEEEEE--EcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec---CCccEEE
Q 008686 138 DAGN--KQVQNLAV--PKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI---NDTGLAI 210 (557)
Q Consensus 138 ~~~~--~~~q~lA~--s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~---~~~G~i~ 210 (557)
...+ ...+++|+ +.|. .-..|+.. +.++.+. + ....||.++ . ++|++||+++... ...+.|.
T Consensus 96 ~~~~~~~~~i~va~~~s~dp---~~Gpw~~~--g~~~~~~-~---~~~IDp~vf-~-ddG~~Yl~~g~~~~~~~~~~~i~ 164 (468)
T 3akh_A 96 STSDVWAIRMYVLESGAANP---LTGSWTEK--GQIATPV-S---SFSLDATTF-V-VNGVRHLAWAQRNPAEDNNTSLF 164 (468)
T ss_dssp CSSCTTCCEEEEEEECCSCT---TTSCCEEE--EECCCSS-C---SCEEEEEEE-E-ETTEEEEEEEECCTTSSSSBEEE
T ss_pred CCCCCCceeEEEEEccCCCC---CCCCCccc--ceeecCC-C---CCcCcCeEE-E-ECCEEEEEEEccCCCCCCCCcEE
Confidence 5322 34566766 4443 11368763 2333221 1 246899965 4 6899999998643 1234677
Q ss_pred EEEeCCCCCCEEcccc--cccCC------CCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 211 LYRSKDFVNWTKAEQS--LYSTN------QSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 211 ly~S~Dl~~W~~~~~~--~~~~~------~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
+.+.+|. |+..+.+ +..+. .....|-|-+++.+ | +++|++|...
T Consensus 165 i~~l~~~--~~~~g~~~~i~~~~~~we~~g~~~~EGP~i~k~~--G-------------~YYL~ys~~g 216 (468)
T 3akh_A 165 IAKMANP--WTISGTPTEISQPTLSWETVGYKVNEGPAVIQHG--G-------------KVFLTYSASA 216 (468)
T ss_dssp EEEEEET--TEEEEEEEEEECCCSGGGCSSSCBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred EEEeCCC--ceecCccEEecCCCcccccCCCccccCCEEEEEC--C-------------EEEEEEEeCC
Confidence 8887764 6655542 22111 12368999999986 5 8888888754
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=9e-09 Score=113.00 Aligned_cols=174 Identities=10% Similarity=0.062 Sum_probs=113.2
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCC---C---------cCCCceEeeeEEEcc
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQ---P---------FDANSCWSGSVTILP 126 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~---~---------~d~~gv~SGsav~~~ 126 (557)
|+.-||. ++.++|.|+||-....+ ...+...+|+||+||+..+.+|.... . ....|+|.+++...+
T Consensus 15 g~~~DP~-iir~~~~YY~~~st~~~-~pg~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~WAP~i~~~~ 92 (542)
T 3zxk_A 15 EDHPALE-VFRVGSVFYYSSSTFAY-SPGAPVLKSYDLVHWTPVTHSVPRLNFGSNYDLPSGTPGAYVKGIWASTLRYRR 92 (542)
T ss_dssp SCCCSCE-EEEETTEEEEECCCBTE-ESEEEEEEESSSSSCEEEEEEESSCCSCGGGGCCSSTTTTTTCSBCSCEEEEET
T ss_pred CCCCCCe-EEEECCEEEEEEecCcc-CCCeEEEEcCCCCCccccccccccCCccccccccCCcccccCCceECCcEEEEC
Confidence 5668995 77889999998764321 13577889999999999987774321 0 124689999998752
Q ss_pred -CCeEEEEEeeecCCCcceEEEEEEcCCCCCc-----cce---eecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEE
Q 008686 127 -GGNPAVLYTGIDAGNKQVQNLAVPKNLSDPY-----LKE---WIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRV 197 (557)
Q Consensus 127 -dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~-----l~~---w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m 197 (557)
+|++||+|+.. ..+++|+|++..+|+ |++ |++ |+... ....||.+++ +++|+.||
T Consensus 93 ~~G~fYly~~~~-----~~~~v~~a~~p~GPf~~g~~l~~~~~ws~----~~~~~------~~~iDp~~f~-DdDG~~Yl 156 (542)
T 3zxk_A 93 SNDRFYWYGCVE-----GRTYLWTSPGGNALANNGEVPPSAWNWQH----TATID------NCYYDAGLLI-DDDDTMYI 156 (542)
T ss_dssp TTTEEEEEEEET-----TEEEEEEEECTTGGGTTTCCCGGGCCCEE----EEEES------SCCTTCEEEE-CTTSCEEE
T ss_pred CCCEEEEEEECC-----CcEEEEEECCCCCCccccccccccCcccc----ccccC------CCCCCCcEEE-cCCCCEEE
Confidence 49999999863 457889988875432 000 443 11111 2457999655 47899999
Q ss_pred EEeeecCCccEEEEEEe-CCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 198 IIGSKINDTGLAILYRS-KDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 198 ~~ga~~~~~G~i~ly~S-~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
++|. +.|.+.+- +|+..=.-....+.....+...|-|-+++.+ | +++|++|..
T Consensus 157 ~~g~-----~~i~~~eL~~d~~~~~~~~~~i~~~~~g~~~EgP~i~k~~--G-------------~YYL~~s~~ 210 (542)
T 3zxk_A 157 AYGN-----PTINVAQLSPDGTRQVRVQQRVYAHPQGQTVEGARMYKIR--G-------------NYYILVTRP 210 (542)
T ss_dssp EECS-----SSEEEEEECTTSSSEEEEEEEEECCTTCCCCEEEEEEEET--T-------------EEEEEEEET
T ss_pred EEcC-----CCEEEEEeCCccCcccCCcEEEEeCCCCccccccEEEEEC--C-------------EEEEEEEeC
Confidence 9974 34556664 4543322111113322333478999999987 6 888888764
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.65 E-value=1e-06 Score=89.78 Aligned_cols=169 Identities=11% Similarity=0.020 Sum_probs=104.9
Q ss_pred ccCCcceEEE----CCEEEEEEEEec--CCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEcc-CCeEEE
Q 008686 61 MNDPNGPMIY----KGIYHFFYQYKL--WDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILP-GGNPAV 132 (557)
Q Consensus 61 ~nDPnG~~~~----~G~YHlfyq~~~--~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~-dg~~~l 132 (557)
+..|. ++++ +|+|||||..+. .+....++|+|+|.. .|++++..|..........+.+++++.++ ||++||
T Consensus 77 ~wAP~-v~~~~~~~~Gkyylyyt~~~~~~~~~~i~va~s~~p~Gpw~~~~~p~~~~~~~g~~~~iDp~vf~dd~dG~~yl 155 (311)
T 3qz4_A 77 AWAPC-IEEKKIDGKYKYFFYYSANPTTNKGKQIGVAVADSPTGPFTDLGKPIITSSPTGRGQQIDVDVFTDPVSGKSYL 155 (311)
T ss_dssp EEEEE-EEEEEETTEEEEEEEEEEEETTCSSCEEEEEEESSTTCCCEECSSCSBCSCTTSSSBSCCCEEEECTTTCCEEE
T ss_pred cCCCe-eEEeeecCCCEEEEEEEeccCCCCCeeEEEEEECCCCCCceECCcceEcCCCCCCcccccccEEEECCCCcEEE
Confidence 34674 7788 999999999882 236789999999986 99997643333222112346789999876 899999
Q ss_pred EEeeecCCCcceEEEEE-EcCCCCCccceeecCCCCceEecCCCC---CCCCccCCeEEEecCCCeEEEEEeeecCCc--
Q 008686 133 LYTGIDAGNKQVQNLAV-PKNLSDPYLKEWIKPPENPLMVPADQI---DPGSFRDPTTAWIGPDKIWRVIIGSKINDT-- 206 (557)
Q Consensus 133 ~YTg~~~~~~~~q~lA~-s~d~~d~~l~~w~k~~~~Pvi~~p~~~---~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~-- 206 (557)
+|.+ ..+.++. +.| +.+|... ...++. +.+. ......-|++ ++ .+|+|||++++.....
T Consensus 156 ~~g~------~~i~~~~l~~d-----~~~~~~~-~~~i~~-~~~~~~~~~~~~EgP~i-~k-~~g~YyL~~s~~~~~~~~ 220 (311)
T 3qz4_A 156 YWGN------GYMAGAELNDD-----MLSIKEE-TTVVLT-PKGGTLQTYAYREAPYV-IY-RKGIYYFFWSVDDTGSPN 220 (311)
T ss_dssp EECB------SSCEEEEBCTT-----SSSBCGG-GCEECC-CCCCCTTTTCCCEEEEE-EE-ETTEEEEEEEESCTTSTT
T ss_pred EEcC------CCEEEEEeCCc-----ccccCCC-ceEEeC-CCCCcccccceeeccEE-EE-ECCEEEEEEEcCCCCCCC
Confidence 9975 1233443 343 2455542 233333 2221 1234678985 55 5899999998764222
Q ss_pred cEEEEEEeCCCC-CCEEccc-c-cccCC--CCCceeecceEEec
Q 008686 207 GLAILYRSKDFV-NWTKAEQ-S-LYSTN--QSGMWECPDFFPVS 245 (557)
Q Consensus 207 G~i~ly~S~Dl~-~W~~~~~-~-~~~~~--~~~~~ECPdlf~l~ 245 (557)
=++.+++|+++. -|+..+. + +.... .....-.+++|+.+
T Consensus 221 y~~~~~~S~~~~GPw~~~~~~pil~~~~~~~~~g~gH~~~~~~~ 264 (311)
T 3qz4_A 221 YHVVYGTAQSPLGPIEVAKEPIVLIQNPKEEIYGPAHNSILQVP 264 (311)
T ss_dssp CEEEEEEESSTTCCCEEEEEEEEECCBGGGTBEEEEEEEEEECT
T ss_pred ceEEEEEcCCCCCCCEeCCCCcEEecCCCCceEcCCCCeEEEcC
Confidence 278899999986 4988642 2 32211 11234455666655
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.53 E-value=4.8e-06 Score=84.73 Aligned_cols=149 Identities=15% Similarity=0.156 Sum_probs=95.1
Q ss_pred ccCCcceEEE--CCEEEEEEEEecCCCeEEEEEEeCCCC-cceecCC-CCCCCCCcCCCceEeeeEEEccCCeEEEEEee
Q 008686 61 MNDPNGPMIY--KGIYHFFYQYKLWDTVVWGHSTSTDMV-NWTPHDA-AIYPSQPFDANSCWSGSVTILPGGNPAVLYTG 136 (557)
Q Consensus 61 ~nDPnG~~~~--~G~YHlfyq~~~~g~~~Wgha~S~Dlv-hW~~~~~-aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg 136 (557)
+..|. +++. +|+|||||..+ .+.++|+|+|.. .|++... .+.. ....+++++.++||++||+|..
T Consensus 79 ~wAP~-v~~~~~~g~~yl~yt~~----~~i~va~s~~p~Gpw~~~~~~p~~~------~~~iDp~vf~D~dG~~Yl~~~~ 147 (306)
T 3kst_A 79 FWAPE-VYYVESKKKFYLFYSAE----EHICVATSTTPEGPFRQEVKQPIWS------EKSIDTSLFIDDDGTPYLYFVR 147 (306)
T ss_dssp CEEEE-EEEETTTTEEEEEEEET----TEEEEEEESSTTCCCBCSSCCCSSS------SCCEEEEEEECTTSCEEEEEEE
T ss_pred cccCe-EEEECCCCEEEEEEECC----CcEEEEEcCCCCCCcEeCCCccccC------CCcccceEEEeCCCCEEEEEEE
Confidence 44563 5677 99999999963 478999999987 8997532 1221 3468899998778999999975
Q ss_pred ecCCCcceEEEEE-EcCCCCCccceeecCCCCceEecCCCCC---CCCccCCeEEEecCCCeEEEEEeeec--CCccEEE
Q 008686 137 IDAGNKQVQNLAV-PKNLSDPYLKEWIKPPENPLMVPADQID---PGSFRDPTTAWIGPDKIWRVIIGSKI--NDTGLAI 210 (557)
Q Consensus 137 ~~~~~~~~q~lA~-s~d~~d~~l~~w~k~~~~Pvi~~p~~~~---~~~fRDP~V~~~~~~g~~~m~~ga~~--~~~G~i~ 210 (557)
.. ..+.+.++. +.| +.+|......+++.+...++ ...+.-|.+ ++ .+|+|||++.+.. ...-++.
T Consensus 148 ~~--~g~~i~~~~ls~d-----~~~~~~~~~~~~~~~~~~w~~~~~~~~EgP~i-~k-~~G~YYL~~S~~~~~~~~y~v~ 218 (306)
T 3kst_A 148 FT--DGNVIWVAQMTDD-----LMSIKTETLNQCIKAEVSWELLQGKVAEGPSL-LK-KNGVYYLIYSANHYENKGYGVG 218 (306)
T ss_dssp ES--SSEEEEEEEBCTT-----SSCBCGGGCEEEECCCSGGGCSSSSBEEEEEE-EE-ETTEEEEEEEESCTTSTTCEEE
T ss_pred eC--CCCEEEEEEeCcc-----cccccCcceeeeccCCccceecCCCceecceE-EE-ECCEEEEEEEeCCCCCCCceEE
Confidence 43 123344454 333 35665432222332222221 234568884 45 5899999997653 2223688
Q ss_pred EEEeCCCC-CCEE-ccccccc
Q 008686 211 LYRSKDFV-NWTK-AEQSLYS 229 (557)
Q Consensus 211 ly~S~Dl~-~W~~-~~~~~~~ 229 (557)
+++|+++. -|+. .+.++..
T Consensus 219 ~a~S~s~~GPw~~~~~~pil~ 239 (306)
T 3kst_A 219 YATSDTPMGPWVKYSKNPLLQ 239 (306)
T ss_dssp EEEESSTTCCCEECTTCCSBS
T ss_pred EEEeCCCCCCCEeCCCCeeEe
Confidence 99999986 7998 3445554
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=98.38 E-value=5.5e-06 Score=83.54 Aligned_cols=153 Identities=17% Similarity=0.241 Sum_probs=96.6
Q ss_pred CccCCcceEEECCEEEEEEEEecC--CCeEEEEEEeCCCC--cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEe
Q 008686 60 WMNDPNGPMIYKGIYHFFYQYKLW--DTVVWGHSTSTDMV--NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYT 135 (557)
Q Consensus 60 w~nDPnG~~~~~G~YHlfyq~~~~--g~~~Wgha~S~Dlv--hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YT 135 (557)
-+..|. +++++|+|||||..+.. .....++|+|+|+. +|++.+..|..... ....+..++++.++||++||+|.
T Consensus 72 ~~wAP~-v~~~~G~yylyyt~~~~~~~~~~i~va~s~~p~~Gpw~~~~~~l~~~~~-~~~~~iDp~vf~d~dG~~Yl~~g 149 (293)
T 1uv4_A 72 NQWAPD-IQYYNGKYWLYYSVSSFGSNTSAIGLASSTSISSGGWKDEGLVIRSTSS-NNYNAIDPELTFDKDGNPWLAFG 149 (293)
T ss_dssp BCEEEE-EEEETTEEEEEEEECCTTCSCEEEEEEEESCTTTTCCEEEEEEEEECTT-SSSCCCSCEEEECTTSCEEEEEC
T ss_pred ceecce-EEEECCEEEEEEEecCCCCCcceEEEEECCCCCCCCCccCCccEecCCC-CCCCCCCCCeEECCCCCEEEEEE
Confidence 355774 67889999999998732 35679999999997 99987544433221 12245788998877899999996
Q ss_pred eecCCCcceEEEEEE-cCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-----CCccEE
Q 008686 136 GIDAGNKQVQNLAVP-KNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-----NDTGLA 209 (557)
Q Consensus 136 g~~~~~~~~q~lA~s-~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-----~~~G~i 209 (557)
+.. ..+.++.. .|. .++... ...++..+. ....+.-|.+ ++ .+|+|||++.+.. +..-++
T Consensus 150 ~~~----~~i~~~~l~~d~-----~~~~g~-~~~i~~~~~--~~~~~EgP~i-~k-~~g~yyL~~s~~~~~~g~~~~y~~ 215 (293)
T 1uv4_A 150 SFW----SGIKLTKLDKST-----MKPTGS-LYSIAARPN--NGGALEAPTL-TY-QNGYYYLMVSFDKCCDGVNSTYKI 215 (293)
T ss_dssp BST----TCEEEEEECTTT-----CSEEEE-EEEEECCTT--TTTCEEEEEE-EE-ETTEEEEEEEEECSSSSSCCEEEE
T ss_pred ecC----CCEEEEEECchh-----CccCCc-ceEEeecCC--CCCccCccEE-EE-ECCEEEEEEEeCCCcCCCCCcceE
Confidence 532 22444543 332 222210 112332222 1245678985 55 5899999987652 222368
Q ss_pred EEEEeCCCC-CCEEc-ccccc
Q 008686 210 ILYRSKDFV-NWTKA-EQSLY 228 (557)
Q Consensus 210 ~ly~S~Dl~-~W~~~-~~~~~ 228 (557)
.+++|+++. -|+.. +.++.
T Consensus 216 ~~~~s~~~~GP~~~~~~~p~~ 236 (293)
T 1uv4_A 216 AYGRSKSITGPYLDKSGKSML 236 (293)
T ss_dssp EEEEESSTTCCCBCTTSCBGG
T ss_pred EEEEeCCCCCCCCccCCCeee
Confidence 899999875 57765 44444
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=4.8e-06 Score=88.89 Aligned_cols=126 Identities=10% Similarity=0.030 Sum_probs=87.9
Q ss_pred CCcceEEECCEEEEEEEEecC------CCeEEEEEEeCCCCccee--cCCCCCCCCCcCCCceEeeeEEEccCCeEEEEE
Q 008686 63 DPNGPMIYKGIYHFFYQYKLW------DTVVWGHSTSTDMVNWTP--HDAAIYPSQPFDANSCWSGSVTILPGGNPAVLY 134 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~~~------g~~~Wgha~S~DlvhW~~--~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~Y 134 (557)
.|. ++.++|+|+|||..+.. .....++|+|+|+.+|++ ..++|.+.......+.-++.++.. +|+++|++
T Consensus 75 sgs-av~~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-dg~~~m~~ 152 (432)
T 1w2t_A 75 SGS-AVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRS-NGEWRMVL 152 (432)
T ss_dssp EEE-EEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCSCSSTTEEEEEEEEEEEC-SSSEEEEE
T ss_pred eeE-EEEECCEEEEEEecCccCCCCCCceEEEEEEEeCCCCeEEecCCCceEeCCCccccccccCCEEEEE-CCEEEEEE
Confidence 453 44589999999998722 246789999999999998 456665432111234677888765 89999999
Q ss_pred eeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 008686 135 TGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSK 202 (557)
Q Consensus 135 Tg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~ 202 (557)
.+..........++.|+| |++|+.. +++... .. ...+.-|.+ ++ .+|+|+|+++.+
T Consensus 153 g~~~~~~~g~i~ly~S~D-----l~~W~~~--g~~~~~-~~--g~~~EcP~l-f~-~~g~~vL~~s~~ 208 (432)
T 1w2t_A 153 GSGKDEKIGRVLLYTSDD-----LFHWKYE--GAIFED-ET--TKEIDCPDL-VR-IGEKDILIYSIT 208 (432)
T ss_dssp EEEETTTEEEEEEEEESS-----SSSCEEE--EEEEEE-TT--CSCCEEEEE-EE-ETTEEEEEEEET
T ss_pred EEecCCCCcEEEEEECCC-----CCCceEc--cccccC-CC--CCEEECCeE-EE-ECCEEEEEEeCC
Confidence 876443445677888877 4899975 355433 11 246789985 45 478999998865
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=98.23 E-value=1.4e-05 Score=81.45 Aligned_cols=160 Identities=14% Similarity=0.186 Sum_probs=95.3
Q ss_pred ccCCcceEEECCEEEEEEEEecC--CCeEEEEEEeCCC--Cc----ceecCCCCCCCCCcCCCceEeeeEEEccCCeEEE
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKLW--DTVVWGHSTSTDM--VN----WTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~~--g~~~Wgha~S~Dl--vh----W~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l 132 (557)
+..|. +++++|+|||||..+.. .....++|+|+++ .. |++.+..+.+....+...+..++++.++||++||
T Consensus 64 ~wAP~-v~~~~g~~ylyyt~~~~~~~~~~igva~s~~~dp~gp~~~w~~~~~v~~~~~~~~~~~~iDp~vf~D~dG~~Yl 142 (318)
T 1gyh_A 64 LWAPD-IYQHKGLFYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHGQVWM 142 (318)
T ss_dssp EEEEE-EEEETTEEEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTSCEEE
T ss_pred cccCe-EEEECCEEEEEEEeccCCCCcceEEEEEeCCCCCCCCCcceecCCcccccCCCCCCCCcccCCeEECCCCCEEE
Confidence 45674 67889999999998732 3567899999983 33 9987654543222233346789998877899999
Q ss_pred EEeeecCCCcceEEEEEE-cCCC-CCccceeecCC--CCce-EecCCCCCCCCccCCeEEEecCCCeEEEEEeee-----
Q 008686 133 LYTGIDAGNKQVQNLAVP-KNLS-DPYLKEWIKPP--ENPL-MVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSK----- 202 (557)
Q Consensus 133 ~YTg~~~~~~~~q~lA~s-~d~~-d~~l~~w~k~~--~~Pv-i~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~----- 202 (557)
+|.+.. ..+.++.. .|.. ...+..|+... ..++ +... ......+.-|.+ ++ .+|+|||++.+.
T Consensus 143 ~~g~~~----~~i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~-~~~~~~~EgP~i-~k-~~g~yYL~~s~~~~~~g 215 (318)
T 1gyh_A 143 SFGSFW----GGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDS-QAGSAQIEAPFI-LR-KGDYYYLFASWGLCCRK 215 (318)
T ss_dssp EECBST----TCEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTT-SCCSCCEEEEEE-EE-ETTEEEEEEEESCCSCG
T ss_pred EeeccC----CCEEEEEeCCccccccceeecceecccCcceeeccc-CCCCcceeccEE-EE-ECCEEEEEEEeCCCcCC
Confidence 997542 22444543 3310 00123443210 0111 1110 111235678885 55 589999998763
Q ss_pred cCCccEEEEEEeCCCC-CCEEc-ccccc
Q 008686 203 INDTGLAILYRSKDFV-NWTKA-EQSLY 228 (557)
Q Consensus 203 ~~~~G~i~ly~S~Dl~-~W~~~-~~~~~ 228 (557)
....-++.+++|+++. -|+.. +.++.
T Consensus 216 ~~~~y~~~~~rS~s~~GP~~~~~g~p~~ 243 (318)
T 1gyh_A 216 GDSTYHLVVGRSKQVTGPYLDKTGRDMN 243 (318)
T ss_dssp GGCCCEEEEEEESSTTSCCBCTTSBBGG
T ss_pred CCCcceEEEEEcCCCCCCCCcCCCCEee
Confidence 1222368899999875 58765 44544
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=98.22 E-value=5.4e-05 Score=77.00 Aligned_cols=155 Identities=17% Similarity=0.245 Sum_probs=93.6
Q ss_pred CccCCcceEEECCEEEEEEEEecC--CCeEEEEEEeCCC---Cc---ceecCCCCCCCCCcCCCceEeeeEEEccCCeEE
Q 008686 60 WMNDPNGPMIYKGIYHFFYQYKLW--DTVVWGHSTSTDM---VN---WTPHDAAIYPSQPFDANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 60 w~nDPnG~~~~~G~YHlfyq~~~~--g~~~Wgha~S~Dl---vh---W~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~ 131 (557)
-+..|. +++++|+|||||..+.. .....++|+|+|+ -. |++.+..+.+. ..+...+..++++.++||++|
T Consensus 81 ~~wAP~-v~~~~g~yylyyt~~~~~~~~~~igva~s~~~dP~gp~~~w~~~~~~~~~~-~~~~~~~iDp~vf~D~dG~~Y 158 (314)
T 3cu9_A 81 HLWAPD-ICFYNGIYYLYYSVSTFGKNTSVIGLATNQTLDPRDPDYEWKDMGPVIHST-ASDNYNAIDPNVVFDQEGQPW 158 (314)
T ss_dssp EEEEEE-EEEETTEEEEEEEECCTTCCCEEEEEEEESCSCTTSTTCCCEEEEEEEEEC-TTSSSCCCSCEEEECTTSCEE
T ss_pred ceecCc-EEEECCEEEEEEEeccCCCCCceEEEEEeCCCCCCCCCcCcccCCeEecCC-CCCCCCccCCCeEEcCCCCEE
Confidence 345674 67789999999998732 3577899999984 23 99876543321 112234578999887789999
Q ss_pred EEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCce-EecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-----CC
Q 008686 132 VLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPL-MVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-----ND 205 (557)
Q Consensus 132 l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pv-i~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-----~~ 205 (557)
|+|.+.. ..+.++...+.. ..... ...++ +... +.....+.-|.+ ++ .+|+|||++.+.. ..
T Consensus 159 l~~g~~~----~~i~~~~l~~d~----~~~~~-~~~~~~~~~~-~~~~~~~EgP~i-~k-~~G~yyL~~s~~~~~~g~~~ 226 (314)
T 3cu9_A 159 LSFGSFW----SGIQLIQLDTET----MKPAA-QAELLTIASR-GEEPNAIEAPFI-VC-RNGYYYLFVSFDFCCRGIES 226 (314)
T ss_dssp EEECBST----TCEEEEECCTTT----CSCCT-TCCCEEEECC-SSSSCCEEEEEE-EE-ETTEEEEEEEESCCSSGGGC
T ss_pred EEEeccC----CcEEEEEECccc----CcccC-CCceEEeccc-CCCCCccCccEE-EE-ECCEEEEEEEcCCcccCCCC
Confidence 9998642 224455432211 11110 01122 2211 111235788985 55 5899999987531 22
Q ss_pred ccEEEEEEeCCCC-CCEEc-ccccc
Q 008686 206 TGLAILYRSKDFV-NWTKA-EQSLY 228 (557)
Q Consensus 206 ~G~i~ly~S~Dl~-~W~~~-~~~~~ 228 (557)
.-++.+++|+++. -|+.. +.++.
T Consensus 227 ~y~~~~~~s~s~~GP~~~~~~~p~~ 251 (314)
T 3cu9_A 227 TYKIAVGRSKDITGPYVDKNGVSMM 251 (314)
T ss_dssp CCEEEEEEESSTTSCCBCTTSCBGG
T ss_pred cceEEEEEeCCCCCCCCcCCCCccc
Confidence 2368899999875 68865 44554
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=6.8e-05 Score=80.78 Aligned_cols=155 Identities=11% Similarity=0.120 Sum_probs=98.2
Q ss_pred CCccCCcceEEECCEEEEEEEEecCC---CeEEEEEE--eCCC--CcceecCCCCCCCCCcCCCceEeeeEEEccCCeEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWD---TVVWGHST--STDM--VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g---~~~Wgha~--S~Dl--vhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~ 131 (557)
+-+..|. +++++|+|+|||.....+ ....+.|+ |+|. -.|++.+..+.|.. ..+.+++++. +||++|
T Consensus 74 ~~~WAP~-v~~~~Gkyylyys~~~~~~~~~~~i~va~~~s~dp~~Gpw~~~g~~~~~~~----~~~IDp~vf~-ddG~~Y 147 (468)
T 3akh_A 74 AHIWAPE-IHFIDGKWYVYFAAGSTSDVWAIRMYVLESGAANPLTGSWTEKGQIATPVS----SFSLDATTFV-VNGVRH 147 (468)
T ss_dssp EEEEEEE-EEEETTEEEEEEEEECSSCTTCCEEEEEEECCSCTTTSCCEEEEECCCSSC----SCEEEEEEEE-ETTEEE
T ss_pred CCEecce-EEEECCEEEEEEEeECCCCCCceeEEEEEccCCCCCCCCCcccceeecCCC----CCcCcCeEEE-ECCEEE
Confidence 3466784 778999999999987322 45677776 8886 48999776555532 3478999988 699999
Q ss_pred EEEeeecCC--CcceEEEEEEcCCCCCccceeecCCCCceE-ecC-CCCCC---CCccCCeEEEecCCCeEEEEEeeec-
Q 008686 132 VLYTGIDAG--NKQVQNLAVPKNLSDPYLKEWIKPPENPLM-VPA-DQIDP---GSFRDPTTAWIGPDKIWRVIIGSKI- 203 (557)
Q Consensus 132 l~YTg~~~~--~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi-~~p-~~~~~---~~fRDP~V~~~~~~g~~~m~~ga~~- 203 (557)
|+|.+.... ....+.+|..++. .+.. ..|+. ..+ ..++. ....-|++ ++ .+|.|||++.+..
T Consensus 148 l~~g~~~~~~~~~~~i~i~~l~~~-----~~~~---g~~~~i~~~~~~we~~g~~~~EGP~i-~k-~~G~YYL~ys~~g~ 217 (468)
T 3akh_A 148 LAWAQRNPAEDNNTSLFIAKMANP-----WTIS---GTPTEISQPTLSWETVGYKVNEGPAV-IQ-HGGKVFLTYSASAT 217 (468)
T ss_dssp EEEEECCTTSSSSBEEEEEEEEET-----TEEE---EEEEEEECCCSGGGCSSSCBEEEEEE-EE-ETTEEEEEEEESCS
T ss_pred EEEEccCCCCCCCCcEEEEEeCCC-----ceec---CccEEecCCCcccccCCCccccCCEE-EE-ECCEEEEEEEeCCC
Confidence 999865321 2244556655442 2222 12332 222 12221 23567884 55 5899999987654
Q ss_pred CCccEEEEEEeC---CCCC---CEEccccccc
Q 008686 204 NDTGLAILYRSK---DFVN---WTKAEQSLYS 229 (557)
Q Consensus 204 ~~~G~i~ly~S~---Dl~~---W~~~~~~~~~ 229 (557)
+..-++.+++|+ ++.. |+..+.++..
T Consensus 218 ~~~y~v~~a~s~~~~~~~gP~~w~~~~~pvl~ 249 (468)
T 3akh_A 218 DANYCLGMLSASASADLLNAASWTKSSQPVFK 249 (468)
T ss_dssp STTCEEEEEEEETTSCTTSGGGCEECSSCSBC
T ss_pred CCCceEEEEEECCCCCCCCcHHhccCCceEEE
Confidence 222368889987 6654 9887656554
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=7.7e-05 Score=75.79 Aligned_cols=141 Identities=11% Similarity=-0.004 Sum_probs=89.6
Q ss_pred ccCCcceEEECCEEEEEEEEecCC---CeEEEEEEeCCCC-cceec-CC-CCCCCC---CcCCCceEeeeEEEccCCeEE
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKLWD---TVVWGHSTSTDMV-NWTPH-DA-AIYPSQ---PFDANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~~g---~~~Wgha~S~Dlv-hW~~~-~~-aL~P~~---~~d~~gv~SGsav~~~dg~~~ 131 (557)
+.-|. +++++|+|||||..+..+ ....++|+|+|.. .|++. +. .+.... ........+++++.++||++|
T Consensus 75 ~WAP~-i~~~~Gkyylyyt~~~~~~~~~~~i~va~s~~p~Gpw~~~~~~pl~~~~~~~~~~~~~~~iDp~vf~DddG~~Y 153 (307)
T 3qee_A 75 AWASQ-VIERNGKFYWYVTVRHDDTKPGFAIGVAVGDSPIGPFKDALGKALITNDMTTDTPIDWDDIDPSVFIDDDGQAY 153 (307)
T ss_dssp EEEEE-EEEETTEEEEEEEEEECTTSCSEEEEEEEESSTTCCCEESSSSCSBCGGGCCSSCCSCCSCCCEEEECTTSCEE
T ss_pred ccCce-EEEECCEEEEEEEeccCCCCCceEEEEEEECCCCCCCEeCCCCeeEecCccccCCCCcCcccCceEECCCCCEE
Confidence 45674 678999999999988222 4789999999964 89983 43 232110 001123578899887789999
Q ss_pred EEEeeecCCCcceEEEE-EEcCCCCCccceeecCCCCce-EecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEE
Q 008686 132 VLYTGIDAGNKQVQNLA-VPKNLSDPYLKEWIKPPENPL-MVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLA 209 (557)
Q Consensus 132 l~YTg~~~~~~~~q~lA-~s~d~~d~~l~~w~k~~~~Pv-i~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i 209 (557)
|+|.+.. ..++ .+.| +.+|.. .+. |..+ ...+.-|.+ ++ .+|+|||++++. ..-++
T Consensus 154 l~~g~~~------i~~~~l~~d-----~~~~~g---~~~~i~~~----~~~~EgP~i-~k-~~g~YyL~~s~~--~~~~~ 211 (307)
T 3qee_A 154 LFWGNTR------PRYAKLKKN-----MVELDG---PIRAIEGL----PEFTEAIWV-HK-YQDNYYLSYAMG--FPEKI 211 (307)
T ss_dssp EEECSSS------CEEEEECTT-----SSSEEE---EEEECCCC----TTEEEEEEE-EE-CC-CEEEEEEET--TTTEE
T ss_pred EEEeCCc------EEEEEECCc-----cccccC---ceEEeCCC----CCccCceEE-EE-ECCEEEEEEECC--CCcEE
Confidence 9996531 2233 2333 245543 122 2111 124578884 56 689999998874 23467
Q ss_pred EEEEeCCCC-CCEEcc
Q 008686 210 ILYRSKDFV-NWTKAE 224 (557)
Q Consensus 210 ~ly~S~Dl~-~W~~~~ 224 (557)
.+++|+++. -|++.+
T Consensus 212 ~~~~s~~~~GP~~~~~ 227 (307)
T 3qee_A 212 GYAMGKSIKGPWVYKG 227 (307)
T ss_dssp EEEEESSTTCCCEEEE
T ss_pred EEEECCCCCCCcEECC
Confidence 888999986 688764
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=0.00043 Score=75.72 Aligned_cols=151 Identities=13% Similarity=0.127 Sum_probs=93.5
Q ss_pred CCccCCcceEEECCEEEEEEEEe-c----CCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYK-L----WDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~-~----~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l 132 (557)
+-+.-|. ++|++|+|||||... . +.....++|+|+|.. .|++ +..+. ....+++++.++||+.||
T Consensus 70 ~~~WAP~-i~~~~g~~yly~t~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~~-------~~~iDp~~f~DddG~~Yl 140 (538)
T 3c2u_A 70 GGIWAPD-LSYADGKFWLIYTDVKVVDGMWKDCHNYLTTAEDIKGPWSK-PILLN-------GAGFDASLFHDPSGKKYL 140 (538)
T ss_dssp CEECSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTCCCCC-CEEEE-------CSCSCCEEEECTTSCEEE
T ss_pred CCEECCe-EEEECCEEEEEEEeccCCCCCcccccEEEEEECCCCCCccc-cEecC-------CCcCCCeeEECCCCCEEE
Confidence 3466784 788999999999965 2 124678999999987 4986 33231 124678998877899999
Q ss_pred EEeeecC--C--CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCc-c
Q 008686 133 LYTGIDA--G--NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDT-G 207 (557)
Q Consensus 133 ~YTg~~~--~--~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~-G 207 (557)
+|..... . ....+.++...+.. .+..- +...|..+ .+ .....-|++ ++ .+|.|||++.+..... -
T Consensus 141 ~~~~~~~~~~~~~~~~i~~~~l~~d~----~~~~g-~~~~i~~~-~~--~~~~EgP~i-~k-~~G~YYL~~s~gg~~~~~ 210 (538)
T 3c2u_A 141 VNMYWDQRVYHHNFYGIALQEYSVAE----EKLIG-KPEIIYKG-TD--IAYTEGPHL-YY-INDMYYLMTAEGGTTYQH 210 (538)
T ss_dssp EEEEECCCTTSCSEEEEEEEEEETTT----TEECS-CCEEEECC-CT--TCCCEEEEE-EE-ETTEEEEEEEESCSSTTC
T ss_pred EEEecCCccCCCCCCCEEEEEECCcc----CCCCC-CCEEEecC-CC--CCccccceE-EE-ECCEEEEEEecCCCCCCe
Confidence 9985432 1 12334455432211 11111 11223322 11 235678985 55 5899999987653222 2
Q ss_pred EEEEEEeCCCC-CCEEcc-cccc
Q 008686 208 LAILYRSKDFV-NWTKAE-QSLY 228 (557)
Q Consensus 208 ~i~ly~S~Dl~-~W~~~~-~~~~ 228 (557)
++.+++|+++. -|+... .++.
T Consensus 211 ~~~~~rS~s~~GP~~~~~~~pil 233 (538)
T 3c2u_A 211 SETIARSKTIHGPYEIQPDYPLL 233 (538)
T ss_dssp EEEEEEESSTTCCCEECTTCCSB
T ss_pred EEEEEEECCCCCCCccCCCCceE
Confidence 68899999986 688764 3444
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00062 Score=74.35 Aligned_cols=150 Identities=12% Similarity=0.106 Sum_probs=94.4
Q ss_pred CCccCCcceEEECCEEEEEEEEe-c----CCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYK-L----WDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~-~----~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l 132 (557)
+-+..|. +++++|+|||||... . +...+.+.|+|+|.. .|++ ++.+ .. ..++++++.++||+.||
T Consensus 70 ~~~WAP~-i~~~~g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~-~~------~~iDp~~f~D~dG~~Yl 140 (533)
T 1yif_A 70 GGVWAPC-LSYSDGKFWLIYTDVKVVDGAWKDCHNYLVTCETINGDWSE-PIKL-NS------SGFDASLFHDTDGKKYL 140 (533)
T ss_dssp CBBCSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEEC-CC------SCSCCEEEECTTSCEEE
T ss_pred CCEECce-EEEECCEEEEEEEeccCCCCCcccccEEEEEeCCCCCCccc-cEEc-CC------CcCCCceEECCCCCEEE
Confidence 4467884 788999999999965 2 224678999999986 7986 3323 11 24678998877899999
Q ss_pred EEeeecC-CC---cceEEEEE-EcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCc
Q 008686 133 LYTGIDA-GN---KQVQNLAV-PKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDT 206 (557)
Q Consensus 133 ~YTg~~~-~~---~~~q~lA~-s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~ 206 (557)
+|.+... .+ ...+.++. +.|. .+... +...|+.... .....-|++ ++ .+|+|||++.+.. ...
T Consensus 141 ~~~~~~~~~g~~~~~~i~~~~l~~d~-----~~~~g-~~~~i~~~~~---~~~~EgP~i-~k-~~G~YYL~~s~gg~~~~ 209 (533)
T 1yif_A 141 LNMLWDHRIDRHSFGGIVIQEYSDKE-----QKLIG-KPKVIFEGTD---RKLTEAPHL-YH-IGNYYYLLTAEGGTRYE 209 (533)
T ss_dssp EEEEECCCTTSCSEEEEEEEEEETTT-----TEECS-CCEEEECCCT---TCCCEEEEE-EE-ETTEEEEEEEESCSSTT
T ss_pred EEEecccccCCCCCCCEEEEEECCcc-----CCCCC-CcEEEEcCCC---CCccccceE-EE-ECCEEEEEEeCCCCCCC
Confidence 9985431 11 23344553 3332 12211 1123333211 235678885 55 5899999987643 222
Q ss_pred cEEEEEEeCCCC-CCEEcc-cccc
Q 008686 207 GLAILYRSKDFV-NWTKAE-QSLY 228 (557)
Q Consensus 207 G~i~ly~S~Dl~-~W~~~~-~~~~ 228 (557)
-++.+++|+++. -|+... .++.
T Consensus 210 ~~v~~~rs~s~~GP~~~~~~~pil 233 (533)
T 1yif_A 210 HAATIARSANIEGPYEVHPDNPIL 233 (533)
T ss_dssp CEEEEEEESSTTCCCEECTTCCSE
T ss_pred eEEEEEEECCCCceeeeCCCCceE
Confidence 268899999875 688763 3444
|
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=5.8e-05 Score=82.34 Aligned_cols=138 Identities=14% Similarity=0.189 Sum_probs=93.8
Q ss_pred EeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCC---CcceEEEEEEcCCCCCccceeecCCCCc
Q 008686 92 TSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAG---NKQVQNLAVPKNLSDPYLKEWIKPPENP 168 (557)
Q Consensus 92 ~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~s~d~~d~~l~~w~k~~~~P 168 (557)
.|.++++|.+..--+.|...| +=.+..++..+|+|+|||.-+... +...-++|+|+| |.||+..+ +
T Consensus 10 ~~~~~~~~~Rp~yH~~P~~gw----mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~D-----LvhW~~~p--~ 78 (546)
T 3ugf_A 10 WSNAQLSWQRTAFHFQPERSW----MSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRD-----LIHWLYLP--L 78 (546)
T ss_dssp CCHHHHHHTSCSSSCCCSSEE----EEEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESS-----SSSCEECC--C
T ss_pred cchhhhhhcCCeEEEeCCCCC----ccCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCC-----cCccccCC--C
Confidence 366788898877778887754 223343444589999999865432 235678999998 48999863 6
Q ss_pred eEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC-CccEEEEEEeCCC-----CCCEEcc-cccccCCCC---Cceee
Q 008686 169 LMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN-DTGLAILYRSKDF-----VNWTKAE-QSLYSTNQS---GMWEC 238 (557)
Q Consensus 169 vi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~-~~G~i~ly~S~Dl-----~~W~~~~-~~~~~~~~~---~~~EC 238 (557)
+|.|...++....-.+.++.. ++|+++|++.+... ..-...++.|+|+ .+|+... .|+...+.+ ..+.-
T Consensus 79 AL~P~~~~D~~G~~SGSavv~-~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~fRD 157 (546)
T 3ugf_A 79 ALAADQWYDMQGVFSGSATCL-PDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFRD 157 (546)
T ss_dssp CBCSCSGGGTTCEEEEEEEEC-TTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSCCC
T ss_pred CCCCCcccccCCcCcceEEEe-eCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCcceeec
Confidence 676655455566677775433 68899999977643 3345678899885 8999864 455543322 35777
Q ss_pred cce
Q 008686 239 PDF 241 (557)
Q Consensus 239 Pdl 241 (557)
|.+
T Consensus 158 PkV 160 (546)
T 3ugf_A 158 AST 160 (546)
T ss_dssp BCC
T ss_pred cce
Confidence 874
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00039 Score=75.83 Aligned_cols=151 Identities=13% Similarity=0.071 Sum_probs=93.2
Q ss_pred CCccCCcceEEECCEEEEEEEEe-c-CC---CeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYK-L-WD---TVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~-~-~g---~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l 132 (557)
+-+..|. +++++|+|||||... . .+ ..+.++|+|+|.. .|++ +..+ ....++++++.++||+.||
T Consensus 72 ~~~wAP~-i~~~~g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~-------~~~~iDp~vf~D~dG~~Yl 142 (528)
T 1yrz_A 72 GGIWAPC-LSYHDGTFYLIYTDVKQWHGAFKDAHNYLVTAQNIEGPWSD-PIYL-------NSSGFDPSLFHDDDGRKWL 142 (528)
T ss_dssp CEECSCE-EEEETTEEEEEEEEEEECSSSCCEEEEEEEEESSSSSCCCC-CEEC-------CCSCSCCEEEECTTSCEEE
T ss_pred CCEECCe-EEEECCEEEEEEecccCCCCCcccceEEEEEeCCCCCCccc-cEEC-------CCCcCCCceEECCCCCEEE
Confidence 3466884 788999999999965 2 23 3458899999987 5986 3223 1235788998877899999
Q ss_pred EEeeecC-C---CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCcc
Q 008686 133 LYTGIDA-G---NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDTG 207 (557)
Q Consensus 133 ~YTg~~~-~---~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~G 207 (557)
+|..... . ....+.++...+.. .+... +..+|+... ....+.-|.+ ++ .+|+|||++.+.. ...-
T Consensus 143 ~~~~~~~~~~~~~~~~i~~~~l~~d~----~~~~g-~~~~i~~~~---~~~~~EgP~i-~k-~~G~YYL~~s~~g~~~~~ 212 (528)
T 1yrz_A 143 VNMIWDYRKGNHPFAGIILQEYSEAE----QKLVG-PVKNIYKGT---DIQLTEGPHL-YK-KDGYYYLLVAEGGTEYEH 212 (528)
T ss_dssp EEEEECCCTTSCSEEEEEEEEEETTT----TEEEE-EEEEEECCC---TTCCCEEEEE-EE-ETTEEEEEEEESCSSTTC
T ss_pred EEeeccCCCCCCCCCeEEEEEECCcc----CCCCC-CCEEEEcCC---CCCccCCCEE-EE-ECCEEEEEEeCCCCCCCc
Confidence 9654321 1 12344555433211 12221 112233221 1235678984 55 5899999987653 2223
Q ss_pred EEEEEEeCCCC-CCEEcc-cccc
Q 008686 208 LAILYRSKDFV-NWTKAE-QSLY 228 (557)
Q Consensus 208 ~i~ly~S~Dl~-~W~~~~-~~~~ 228 (557)
++.+++|+++. -|+... .++.
T Consensus 213 ~~~~~rs~~~~GP~~~~~~~pil 235 (528)
T 1yrz_A 213 AATLARSQSIDGPYETDPSYPLV 235 (528)
T ss_dssp EEEEEEESSTTCCCEECTTCCSE
T ss_pred EEEEEEECCCCCCCCcCCCCeEE
Confidence 68899999986 798863 3444
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00031 Score=76.71 Aligned_cols=165 Identities=12% Similarity=0.058 Sum_probs=99.4
Q ss_pred ccCCcceEEE--CCEEEEEEEEe---cCCCeEEEEEEeCCCC-cceecCCCCCCCC-------CcCCCceEeeeEEEccC
Q 008686 61 MNDPNGPMIY--KGIYHFFYQYK---LWDTVVWGHSTSTDMV-NWTPHDAAIYPSQ-------PFDANSCWSGSVTILPG 127 (557)
Q Consensus 61 ~nDPnG~~~~--~G~YHlfyq~~---~~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~-------~~d~~gv~SGsav~~~d 127 (557)
+.-|. ++|+ +|+|||||... .++..+.++|+|+|.. .|++.+. +.|-. .++...+.+++++.++|
T Consensus 117 ~WAP~-v~~~~~~Gkyymy~~~~~~~~~~~~~igvats~~p~Gpw~~~g~-~~p~~~~g~~~~~~~~~~~iDp~vf~D~d 194 (526)
T 3vsf_A 117 IERPK-VMYNASTGEFVMWMHWENGINYGQARAAVAYSKTPDGKFTYIRS-FRPMQDTGVMDHGLPGYMSRDCNVFVDTD 194 (526)
T ss_dssp EEEEE-EEECTTTCCEEEEEEEECSSCSCCCEEEEEEESSSSSCCEEEEE-ECSSCTTCCEETTEESCCCCSEEEEECTT
T ss_pred eECCE-EEEECCCCEEEEEEEeeCCCCCCcceEEEEEcCCCCCCCEeccc-cccccccccccCCCCCcccccccEEECCC
Confidence 45563 6665 89999999976 3456899999999997 8997642 11211 11124568899988779
Q ss_pred CeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCC-c
Q 008686 128 GNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND-T 206 (557)
Q Consensus 128 g~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~-~ 206 (557)
|+.||+|.+... ..+.++.-.+. +.++... +...-+ ......|++ ++ .+|+|||++.+.... .
T Consensus 195 G~~Yl~~~~~~~---~~i~i~~l~~d----~~~~~~~---~~~~~~----g~~~EgP~i-~k-~~G~YYL~~S~~tg~~~ 258 (526)
T 3vsf_A 195 GKGYFISAANEN---MDLHLYELTPD----YKNIASL---KAKLFV----GQQREAPCL-IK-RNGYYYLITSGCTGWNP 258 (526)
T ss_dssp SCEEEEEEETTT---TEEEEEEECTT----SSSEEEE---EEEEST----TSCCEEEEE-EE-SSSCEEEEEECCCTTSC
T ss_pred CCEEEEEEecCC---CceEEEEcCCC----cccccCc---eEEeCC----CCCcCCeEE-EE-ECCEEEEEEcCCCCcCC
Confidence 999999986431 23344433321 1333321 111111 135679994 56 689999998643321 2
Q ss_pred cEEEEEEeCCCC-CCEEcccccccCCCCCceeecceEEec
Q 008686 207 GLAILYRSKDFV-NWTKAEQSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 207 G~i~ly~S~Dl~-~W~~~~~~~~~~~~~~~~ECPdlf~l~ 245 (557)
-.+.+++|+++. -|+..+.+. ....+.-....+|++.
T Consensus 259 ~~~~~a~S~s~~GPw~~~~~~~--~~~~~~~q~~~v~~~~ 296 (526)
T 3vsf_A 259 NQAKYAYSKDLASGWSQLYNLG--NSTTYRSQPTFIIPVQ 296 (526)
T ss_dssp CCEEECEESCSSSCCCCCEEES--STTTTTCEEEEEEEEE
T ss_pred CceEEEEeCCCCCCceeCCccC--CCCccCCCCeeEEEec
Confidence 267889999875 577655433 1222334445555554
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00028 Score=75.47 Aligned_cols=124 Identities=15% Similarity=0.201 Sum_probs=83.5
Q ss_pred ECCEEEEEEEEec-----CC------CeEEEEEE-----eCC---CCcceecCCCCCCCCC-cC------CCceEeeeEE
Q 008686 70 YKGIYHFFYQYKL-----WD------TVVWGHST-----STD---MVNWTPHDAAIYPSQP-FD------ANSCWSGSVT 123 (557)
Q Consensus 70 ~~G~YHlfyq~~~-----~g------~~~Wgha~-----S~D---lvhW~~~~~aL~P~~~-~d------~~gv~SGsav 123 (557)
.+|+|||||.... .| ...++.++ |+| |.+|+++++.|.++.. |+ ....-.+.++
T Consensus 173 ~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a~~dgv~~~~w~k~~~l~~~DG~~Yqt~~q~~~~~fRDP~vf 252 (493)
T 1w18_A 173 HGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFTAHTPLLQPDGVLYQNGAQNEFFNFRDPFTF 252 (493)
T ss_dssp TSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEEE
T ss_pred CCCEEEEEEEecccccccccccCCcceeEEEEeccceeccCCCccccccccCCceeecCccccccccccCCccccCCEEE
Confidence 5899999999871 12 24455222 444 6789988888888653 22 2456778888
Q ss_pred Ecc--CCeEEEEEeeecCCC----------------------------------cceEEEEEEcCCCCCccceeecCCCC
Q 008686 124 ILP--GGNPAVLYTGIDAGN----------------------------------KQVQNLAVPKNLSDPYLKEWIKPPEN 167 (557)
Q Consensus 124 ~~~--dg~~~l~YTg~~~~~----------------------------------~~~q~lA~s~d~~d~~l~~w~k~~~~ 167 (557)
.++ ||+.||++.++.... ...++||++.+. .+..|+-. .
T Consensus 253 ~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~a~~~~g~IGLa~~~s~---Dl~~We~~--~ 327 (493)
T 1w18_A 253 EDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSGAYYQKANIGLAIATDS---TLSKWKFL--S 327 (493)
T ss_dssp ECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTTGGGCCEEEEEEEESST---TSCCEEEE--E
T ss_pred ecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhcccccchhccceEEEEEeCCC---CCccceec--C
Confidence 875 389999999875321 234666877643 25789854 5
Q ss_pred ceEecCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 008686 168 PLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSK 202 (557)
Q Consensus 168 Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~ 202 (557)
|++..+.. ...+.-|.|+ + .+|+|||+...+
T Consensus 328 PL~~a~~v--~deiErP~V~-~-~~GkyYLFtSs~ 358 (493)
T 1w18_A 328 PLISANCV--NDQTERPQVY-L-HNGKYYIFTISH 358 (493)
T ss_dssp EEEECTTT--BSCCEEEEEE-E-ETTEEEEEEEEC
T ss_pred ccccCCCC--CCcEECCeEE-E-ECCEEEEEEEcc
Confidence 88775532 3567899965 4 489999998766
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.79 E-value=7.3e-05 Score=79.39 Aligned_cols=136 Identities=13% Similarity=0.215 Sum_probs=89.2
Q ss_pred eEE--ECCEEEEEEEEe--cCCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCCC
Q 008686 67 PMI--YKGIYHFFYQYK--LWDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGN 141 (557)
Q Consensus 67 ~~~--~~G~YHlfyq~~--~~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~~ 141 (557)
++| ++|+|||||..+ ..+....+.|+|++.. .|+++++.+..+.++ ..++++++.++||+.||+|.+.
T Consensus 90 V~y~~~dGkYYLyyt~~~~~~~~~~igVAtSdsP~GPwt~~gpl~~~g~~~---~~IDPsvF~DdDGk~YL~~g~~---- 162 (441)
T 3nqh_A 90 VMKCPSTGEYVMYMHADDMNYKDPHIGYATCSTIAGEYKLHGPLLYEGKPI---RRWDMGTYQDTDGTGYLLLHGG---- 162 (441)
T ss_dssp EEECTTTCCEEEEEEEEETTSCSCEEEEEEESSTTSCCEEEEECEETTEEC---CCCSEEEEECTTSCEEEEEGGG----
T ss_pred eEEEccCCEEEEEEEeCCCCCCcceEEEEEeCCCCCCceEcceeecCCCcc---cccCceEEEeCCCCEEEEeCCC----
Confidence 566 499999999988 3346789999999976 899876544333221 3578999988789999999642
Q ss_pred cceEEEE-EEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC-CccEEEEEEeCCCC-
Q 008686 142 KQVQNLA-VPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN-DTGLAILYRSKDFV- 218 (557)
Q Consensus 142 ~~~q~lA-~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~-~~G~i~ly~S~Dl~- 218 (557)
.++ .+.| +.++.. .++...+ + ....-|++ ++ .+|.|||++..... ....+.+++|+++.
T Consensus 163 ----~I~eLs~D-----~~~~~g---~~~~i~~-g---~~~EgP~i-~K-~~G~YYL~~S~~~g~~~~~~~~arS~s~~G 224 (441)
T 3nqh_A 163 ----IVYRLSKD-----YRTAEE---KVVSGVG-G---SHGESPAM-FK-KDGTYFFLFSNLTSWEKNDNFYFTAPSVKG 224 (441)
T ss_dssp ----EEEEECTT-----SSSEEE---EEESCST-T---CCCEEEEE-EE-ETTEEEEEEECSCTTSCCCCEEEEESSTTC
T ss_pred ----cEEEeCCc-----cccccC---ceEEeCC-C---CceECcEE-EE-ECCEEEEEEeCCCCcCCCceEEEEeCCCCC
Confidence 233 3333 244442 1221111 1 24678984 56 58999999876421 11245789999876
Q ss_pred CCEEccccc
Q 008686 219 NWTKAEQSL 227 (557)
Q Consensus 219 ~W~~~~~~~ 227 (557)
-|++.+.++
T Consensus 225 Pw~~~g~i~ 233 (441)
T 3nqh_A 225 PWTRQGLFA 233 (441)
T ss_dssp CCEEEEESS
T ss_pred CceECCccC
Confidence 688876544
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=0.0012 Score=72.05 Aligned_cols=146 Identities=11% Similarity=0.039 Sum_probs=91.3
Q ss_pred CCccCCcceEEECCEEEEEEEEe-c----CCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYK-L----WDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~-~----~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l 132 (557)
+-+..|. ++|++|+|||||... . +...+.++|+|+|.. .|++ +..+. ....+++++.++||+.||
T Consensus 71 ~~~WAP~-i~~~~g~~ylyyt~~~~~~g~~~~~~~~va~s~~~~Gpw~~-p~~~~-------~~~iDp~vf~DddG~~Yl 141 (535)
T 2exh_A 71 GGVWAPH-LSYSDGKFWLIYTDVKVVEGQWKDGHNYLVTCDTIDGAWSD-PIYLN-------SSGFDPSLFHDEDGRKYL 141 (535)
T ss_dssp CBBCSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEECC-------CSCSCCEEEECTTSCEEE
T ss_pred CCEECCe-EEEECCEEEEEEEeccCCCCCccccceEEEEeCCCCCCccc-cEecC-------CCcCCCceEECCCCCEEE
Confidence 4467884 788999999999975 2 224678999999986 6986 32231 134788998877899999
Q ss_pred EEeeecC-CC---cceEEEEE-EcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC-Cc
Q 008686 133 LYTGIDA-GN---KQVQNLAV-PKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN-DT 206 (557)
Q Consensus 133 ~YTg~~~-~~---~~~q~lA~-s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~-~~ 206 (557)
+|..... .+ ...+.++. +.|. +..... ...|+.+. . .....-|++ ++ .+|.|||++.+... ..
T Consensus 142 ~~~~~~~~~~~~~~~~i~~~~l~~d~----~~~~g~--~~~i~~~~-~--~~~~EgP~i-~k-~~G~YYL~~s~ggt~~~ 210 (535)
T 2exh_A 142 VNMYWDHRVDHHPFYGIVLQEYSVEQ----KKLVGE--PKIIFKGT-D--LRITEGPHL-YK-INGYYYLLTAEGGTRYN 210 (535)
T ss_dssp EEEEECCCTTSCSEEEEEEEEEETTT----TEEEEE--EEEEECCC-T--TCCCEEEEE-EE-ETTEEEEEEEESCSSTT
T ss_pred EEEecCCccCCCCCCcEEEEEECCcc----CCCCCC--cEEEEcCC-C--CCccccceE-EE-ECCEEEEEEeCCCCCCC
Confidence 9985432 11 13344443 3332 111111 12233221 1 235678985 55 58999999876432 22
Q ss_pred cEEEEEEeCCCC-CCEEcc
Q 008686 207 GLAILYRSKDFV-NWTKAE 224 (557)
Q Consensus 207 G~i~ly~S~Dl~-~W~~~~ 224 (557)
-++.+++|+++. -|+...
T Consensus 211 ~~~~~~rs~s~~GP~~~~~ 229 (535)
T 2exh_A 211 HAATIARSTSLYGPYEVHP 229 (535)
T ss_dssp CEEEEEEESSTTCCCEECT
T ss_pred eEEEEEEeCCCCCCCccCC
Confidence 268899999875 687754
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00042 Score=74.63 Aligned_cols=158 Identities=9% Similarity=0.043 Sum_probs=95.2
Q ss_pred CCccCCcceEE-ECCEEEEEEEEec--CCCeEEEEEEeCCCC-cceecCCCCCCC--------CCcC---CCceEeeeEE
Q 008686 59 SWMNDPNGPMI-YKGIYHFFYQYKL--WDTVVWGHSTSTDMV-NWTPHDAAIYPS--------QPFD---ANSCWSGSVT 123 (557)
Q Consensus 59 gw~nDPnG~~~-~~G~YHlfyq~~~--~g~~~Wgha~S~Dlv-hW~~~~~aL~P~--------~~~d---~~gv~SGsav 123 (557)
+-+..|. +++ .+|+|||||.... .+...+++|+|+|+. .|++.+..|.+. ..|+ ...+.+++++
T Consensus 97 ~~~WAP~-vi~~~dGkyylyys~~~~~~~~~~IgvatSddp~GPw~~~g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~vf 175 (470)
T 2x8s_A 97 DTLWAAD-VTQLADGKYYMYYNACRGDSPRSAMGVAVADNIEGPYKNKGIFLKSGMEGTSSDGTPYDATKHPNVVAPHTF 175 (470)
T ss_dssp SSCCCCE-EEECTTSCEEEEEEEECSSSCCEEEEEEEESSTTCCCEEEEEEEEECCSSBCTTSSBCCTTTSCCSCCCEEE
T ss_pred CceECCe-EEEecCCEEEEEEEeccCCCCccEEEEEEeCCCCCCceeCCeeeccCcccccccccccccccCCCCCCCCEE
Confidence 3467885 566 4899999998872 235689999999998 699986544321 1222 2356789999
Q ss_pred EccCCeEEEEEeeecCCCcceEEEEEE-cCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 008686 124 ILPGGNPAVLYTGIDAGNKQVQNLAVP-KNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSK 202 (557)
Q Consensus 124 ~~~dg~~~l~YTg~~~~~~~~q~lA~s-~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~ 202 (557)
.++||++||+|.+.. ..+.++.. .+.+.+ ..+... ...+... ......-|+++++..+|.|||++++.
T Consensus 176 ~DdDG~~Yl~~g~~~----~gI~~~eL~~d~~~~--~~~~~~-~~~i~~g----~~~~~EGP~i~~~K~~G~YYL~~S~g 244 (470)
T 2x8s_A 176 FDKDGKLWMVYGSYS----GGIFILEMNPKTGFP--LPGQGY-GKKLLGG----NHSRIEGPYVLYNPDTQYYYLYLSYG 244 (470)
T ss_dssp ECTTSCEEEEECBST----TCEEEEEBCTTTSSB--CTTCTT-CEEEECC----SSCSEEEEEEEEETTTTEEEEEEEES
T ss_pred EcCCCCEEEEeeecC----CcEEEEEECCccCcC--cCCccc-ceEecCC----CCCceeccEEEEEccCCEEEEEEEeC
Confidence 877899999997643 12334432 221111 111111 1122211 11245788854434689999998764
Q ss_pred c-C--CccEEEEEEeCCCC-CCEE-cccccc
Q 008686 203 I-N--DTGLAILYRSKDFV-NWTK-AEQSLY 228 (557)
Q Consensus 203 ~-~--~~G~i~ly~S~Dl~-~W~~-~~~~~~ 228 (557)
. . ..-++.+++|+++. -|+. .+.++.
T Consensus 245 ~~~~~~~y~v~~arS~s~~GP~~~~~g~pl~ 275 (470)
T 2x8s_A 245 GLDATGGYNIRVARSKKPDGPYYDAEGNPML 275 (470)
T ss_dssp BSSTTSBCEEEEEEESSTTCCCBCTTCCBGG
T ss_pred CCCCCCCceEEEEEECCCCCCCCcCCCCccc
Confidence 3 2 12368899999875 5763 344444
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00024 Score=76.82 Aligned_cols=148 Identities=13% Similarity=0.135 Sum_probs=91.7
Q ss_pred ccCCcceEEE--C--CEEEEEEEEecCCCeEEEEEEeCCCCc-ceec-C-CCCCCCCC-cC-CCceEeeeEEEccCCeEE
Q 008686 61 MNDPNGPMIY--K--GIYHFFYQYKLWDTVVWGHSTSTDMVN-WTPH-D-AAIYPSQP-FD-ANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 61 ~nDPnG~~~~--~--G~YHlfyq~~~~g~~~Wgha~S~Dlvh-W~~~-~-~aL~P~~~-~d-~~gv~SGsav~~~dg~~~ 131 (557)
+..|. ++++ + |+|||||... ....++|+|+|... |++. + +.+.++.+ .+ .....++++++++||+.|
T Consensus 100 ~WAP~-v~~~~~~g~g~yylyyt~~---~~~i~va~s~~p~Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~DddG~~Y 175 (487)
T 3c7f_A 100 SWAPS-IAVKKINGKDKFFLYFANS---GGGIGVLTADSPIGPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFVDDDGTGY 175 (487)
T ss_dssp CEEEE-EEEEEETTEEEEEEEEEST---TBCEEEEEESSTTCCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEECTTSCEE
T ss_pred Ccchh-eEEEecCCCCeEEEEEEcC---CcEEEEEEeCCCCCCcccCCCCeEeecCCCCccCCCCccCCceEEcCCCCEE
Confidence 45674 6665 4 7999999743 35699999999985 9975 3 23332211 11 124688999987789999
Q ss_pred EEEeeecCC----------CcceEEEE-EEcCCCCCccceeecCCCCce-EecCCCCCCCCccCCeEEEecCCCeEEEEE
Q 008686 132 VLYTGIDAG----------NKQVQNLA-VPKNLSDPYLKEWIKPPENPL-MVPADQIDPGSFRDPTTAWIGPDKIWRVII 199 (557)
Q Consensus 132 l~YTg~~~~----------~~~~q~lA-~s~d~~d~~l~~w~k~~~~Pv-i~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ 199 (557)
|+|.+.... ......++ .+.| +.+|... |+ +..| ..+.-|.+ ++ .+|+|||++
T Consensus 176 l~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d-----~~~~~g~---~~~i~~p-----~~~Egp~i-~k-~~G~YYl~y 240 (487)
T 3c7f_A 176 LYAGGGVPGVSNPTQGQWANPKTARVIKLGPD-----MTSVVGS---ASTIDAP-----FMFEDSGL-HK-YNGTYYYSY 240 (487)
T ss_dssp EEEECCCSSTTSCCHHHHHCCCCEEEEEECTT-----SSSEEEE---EEEECCT-----TEEEEEEE-EE-ETTEEEEEE
T ss_pred EEECCcccCccccccccccCCCceEEEEECCC-----eeeccCc---cEEecCC-----ceEecceE-EE-ECCEEEEEE
Confidence 999863211 01234444 3444 3566542 22 2221 24567884 55 589999987
Q ss_pred eeec--C-----CccEEEEEEeCCCC-CCEEccccc
Q 008686 200 GSKI--N-----DTGLAILYRSKDFV-NWTKAEQSL 227 (557)
Q Consensus 200 ga~~--~-----~~G~i~ly~S~Dl~-~W~~~~~~~ 227 (557)
.+.. . ...++.+++|+++. -|++.+.++
T Consensus 241 s~~~~~t~~~~~~~~~i~~~~S~s~~GP~~~~~~il 276 (487)
T 3c7f_A 241 CINFGGTHPADKPPGEIGYMTSSSPMGPFTYRGHFL 276 (487)
T ss_dssp EECSSSCCCTTSCTTSEEEEEESSTTCCCEEEEEEE
T ss_pred ECCCCCCcccCCCCceeEEEEcCCCCCCceECceec
Confidence 7642 1 12468899999875 698875433
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0053 Score=62.44 Aligned_cols=152 Identities=9% Similarity=0.081 Sum_probs=80.2
Q ss_pred ccCCcceEEECCEEEEEEEEecCC-------CeEEEEEEe--CCCC--cceecCCCCCCCCCcCCCceEeeeEEEccCCe
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKLWD-------TVVWGHSTS--TDMV--NWTPHDAAIYPSQPFDANSCWSGSVTILPGGN 129 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~~g-------~~~Wgha~S--~Dlv--hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~ 129 (557)
+.-|. +++++|+|||||.....+ ......+.+ .|-. .|++.+....+.. ..+..++++.+ ||.
T Consensus 74 ~WAP~-v~~~~G~yylyys~~~~~~~~~~~~~~~~~~~~~~~~gP~~~~~~~~~~~~~~~~----~~~IDp~vf~D-dd~ 147 (330)
T 3k1u_A 74 IWAPE-IHFINGAWYIYFAAAPDKNIEDDTFNHRMFVIQNENENPFTGNWVEKGRIKTAWE----SFSLDATIFEH-NEK 147 (330)
T ss_dssp EEEEE-EEEETTEEEEEEEEESSSCCBTTBCCCEEEEEEECSSSTTSSCCEEEEECCCSSC----SCEEEEEEEEE-TTE
T ss_pred eECCE-EEEECCeEEEEEEeccCCCCCCcccceeeeEEEeCCCCCccccccccccccCCCC----CCccCceEEEE-CCc
Confidence 34573 788999999999877211 122222222 2322 5666543222211 24688999886 666
Q ss_pred EEEEEeeecC--CCcceEEEEEEcCCCCCccceeecCCCCceE--ecCCCCCC---CCccCCeEEEecCCCeEEEEEeee
Q 008686 130 PAVLYTGIDA--GNKQVQNLAVPKNLSDPYLKEWIKPPENPLM--VPADQIDP---GSFRDPTTAWIGPDKIWRVIIGSK 202 (557)
Q Consensus 130 ~~l~YTg~~~--~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi--~~p~~~~~---~~fRDP~V~~~~~~g~~~m~~ga~ 202 (557)
.+++|.+... ...+.+.++..++. .+.. ..|+. .+...++. ....-|++ ++ .+|.|||++++.
T Consensus 148 ~~~~~~~~~~~~~~~~~i~i~~l~~~-----~~~~---g~~~~i~~~~~~~e~~~~~~~EGp~i-~k-~~G~YYL~ys~~ 217 (330)
T 3k1u_A 148 LYYVWAQQDINIKGHSNIYIAEMENP-----WTLK---TKPVMLTKPELEWEIKGFWVNEGPAV-LK-KNGKIFITYSAS 217 (330)
T ss_dssp EEEEEEECCTTSSSSBEEEEEEEEET-----TEEC---SCCEEEECSCSGGGCSSSCBEEEEEE-EE-ETTEEEEEEEES
T ss_pred cEEEEeecCCCcCCCceEEEEECCCC-----cccc---CCcEEecCCCccccccCCceeeCCEE-EE-ECCEEEEEEEeC
Confidence 6666655432 13344455544332 1111 23332 22211111 22367884 55 589999998765
Q ss_pred c-CCccEEEEEEeCCCC------CCEEcccccc
Q 008686 203 I-NDTGLAILYRSKDFV------NWTKAEQSLY 228 (557)
Q Consensus 203 ~-~~~G~i~ly~S~Dl~------~W~~~~~~~~ 228 (557)
. ...=++.+++|+... .|+..+.++.
T Consensus 218 ~~~~~y~~~~~~s~~~~gP~~~~~~~~~~~pi~ 250 (330)
T 3k1u_A 218 ATDVNYCIGMLTAEENSNLLDKNSWTKSQTPVF 250 (330)
T ss_dssp CSSTTCEEEEEEEETTSCTTSGGGCEECSSCSB
T ss_pred CCCCCceEEEEEECCCCCCCCCccccccCCCEE
Confidence 4 222367788886542 3776655444
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0011 Score=72.68 Aligned_cols=124 Identities=17% Similarity=0.261 Sum_probs=80.8
Q ss_pred CCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCC---Cc-ceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCc
Q 008686 106 IYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAG---NK-QVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSF 181 (557)
Q Consensus 106 L~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~---~~-~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~f 181 (557)
+.|...| +-.+..++..+|+|+|||.-+... +. ..-+.|+|+| |.+|+.. .|+|.|...++....
T Consensus 13 ~~p~~gw----~NDPnG~~~~~G~yHlFYQ~~P~~~~~g~~~~WgHa~S~D-----lv~W~~~--~~aL~P~~~~D~~Gv 81 (543)
T 1st8_A 13 FQPPSNW----MNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYD-----LVNWIHL--DPAIYPTQEADSKSC 81 (543)
T ss_dssp CCCSSEE----EEEEEEEEEETTEEEEEEEEESSCSSCCSCCEEEEEEESS-----SSSEEEC--CCSBCCCSGGGTTEE
T ss_pred ccCCcCC----eECCcccEEECCEEEEEEeeCCCCCCCCCccEEEEEECCC-----ccceEEC--CeeccCCCccccCCE
Confidence 5555533 344554444599999999877543 22 5678999998 4899985 467766544444555
Q ss_pred cCCeEEEecCCCeEEEEEeeec-CCccEEEEEEeCCC-----CCCEEcc-cccccCCCC---Cceeecce
Q 008686 182 RDPTTAWIGPDKIWRVIIGSKI-NDTGLAILYRSKDF-----VNWTKAE-QSLYSTNQS---GMWECPDF 241 (557)
Q Consensus 182 RDP~V~~~~~~g~~~m~~ga~~-~~~G~i~ly~S~Dl-----~~W~~~~-~~~~~~~~~---~~~ECPdl 241 (557)
-.+.++.. ++|+++|++.+.. +......++.|+|. .+|+... .|+...+.+ ..+.-|..
T Consensus 82 ~SGsav~~-~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~g~~~~~fRDP~v 150 (543)
T 1st8_A 82 WSGSATIL-PGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPPEGVKDDCFRDPST 150 (543)
T ss_dssp EEEEEEEE-TTTEEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTCCTTSEECCCC
T ss_pred EcceEEEe-eCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCcceeEEcCCCcEEeCCCCCCcCccCCCeE
Confidence 66765444 5889999997733 33446678889875 8899863 455543322 46778874
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0017 Score=69.00 Aligned_cols=140 Identities=9% Similarity=0.104 Sum_probs=91.6
Q ss_pred ECCEEEEEEEEe-c--CCCeEEEEEE-----eCCC---CcceecCCCCCCCCC-c---------------CCCceEeeeE
Q 008686 70 YKGIYHFFYQYK-L--WDTVVWGHST-----STDM---VNWTPHDAAIYPSQP-F---------------DANSCWSGSV 122 (557)
Q Consensus 70 ~~G~YHlfyq~~-~--~g~~~Wgha~-----S~Dl---vhW~~~~~aL~P~~~-~---------------d~~gv~SGsa 122 (557)
.+|++||||..+ . .....+++|+ |+|. ..|+++.+.|.++.. | +....-.+.+
T Consensus 145 ~dG~i~LfYTg~~~~~~~~q~I~~a~~~l~~~~dgv~~~~~~~~~~l~~~Dg~~Yq~~~q~~~~~~~~~~~~~~fRDP~V 224 (447)
T 1oyg_A 145 SDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHY 224 (447)
T ss_dssp TTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEEE
T ss_pred cCCEEEEEEEeecCCCCCceEEEEEecceeecCCCcceecccCCCceEcCCCccccccccccccccccCCCccccCCCeE
Confidence 599999999998 2 2245678877 6784 566656777777642 1 1234667888
Q ss_pred EEccCCeEEEEEeeecCCC-----------------------------------------cceEEEEE-EcCCCCCccce
Q 008686 123 TILPGGNPAVLYTGIDAGN-----------------------------------------KQVQNLAV-PKNLSDPYLKE 160 (557)
Q Consensus 123 v~~~dg~~~l~YTg~~~~~-----------------------------------------~~~q~lA~-s~d~~d~~l~~ 160 (557)
+.+ +|++||+..+..... ...++|+. |.| +..
T Consensus 225 f~d-~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~Igl~~~s~D-----l~~ 298 (447)
T 1oyg_A 225 VED-KGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDD-----YTL 298 (447)
T ss_dssp EEE-TTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTT-----SSE
T ss_pred EeE-CCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcEEEEEEcCCC-----CCC
Confidence 775 899999998875421 12445553 443 478
Q ss_pred eecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC-C-------ccE-EEEEEeCCCC-CCE
Q 008686 161 WIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN-D-------TGL-AILYRSKDFV-NWT 221 (557)
Q Consensus 161 w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~-~-------~G~-i~ly~S~Dl~-~W~ 221 (557)
|+-. .|++.+... ...+.-|.+ ++ .+|+|||++..+.. . .+. +..|.|+.+. -|+
T Consensus 299 W~~~--~pL~~~~~v--~d~~EcPdl-fk-~dGkyyLf~S~~~s~~~~~g~~~~~vy~~g~vsdsl~GPy~ 363 (447)
T 1oyg_A 299 KKVM--KPLIASNTV--TDEIERANV-FK-MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYK 363 (447)
T ss_dssp EEEE--EEEEECTTT--CSCCEEEEE-EE-ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCE
T ss_pred ceEc--cccccCCCC--CCceEcCcE-EE-ECCEEEEEEecCCCcccccCcCCCcEEEEEEEcCCCCCCCe
Confidence 9864 577765321 245889995 45 58999999887641 1 123 4478899885 464
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0023 Score=70.09 Aligned_cols=126 Identities=13% Similarity=0.239 Sum_probs=81.6
Q ss_pred CCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCC---CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCcc
Q 008686 106 IYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAG---NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFR 182 (557)
Q Consensus 106 L~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fR 182 (557)
+.|...| +-.+..++..+|+++|||.-+... +...-+.|+|+| |.+|+.. .|+|.|...++....-
T Consensus 14 ~~p~~gw----~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~--~~aL~P~~~~D~~G~~ 82 (541)
T 2ac1_A 14 FQPPKNW----MNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTD-----LINWDPH--PPAIFPSAPFDINGCW 82 (541)
T ss_dssp CCCSSEE----EEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESS-----SSSBEEE--EEEECCCSGGGTTCEE
T ss_pred ecCccCC----eeCCCccEEECCEEEEEEeeCCCCCCCCCcEEEEEECCC-----ccceEEC--ceeecCCCccccCCEE
Confidence 5555433 344454444599999999876543 334568899998 4899985 4677665445555666
Q ss_pred CCeEEEecCCCeEEEEEeeec-CCccEEEEEEeCCC-----CCCEEcc-cccccCC--C---CCceeecc-eEE
Q 008686 183 DPTTAWIGPDKIWRVIIGSKI-NDTGLAILYRSKDF-----VNWTKAE-QSLYSTN--Q---SGMWECPD-FFP 243 (557)
Q Consensus 183 DP~V~~~~~~g~~~m~~ga~~-~~~G~i~ly~S~Dl-----~~W~~~~-~~~~~~~--~---~~~~ECPd-lf~ 243 (557)
.+.++.. ++|+++|++.+.. +....+.++.|+|. .+|+... .|+...+ . ...+.-|. ++.
T Consensus 83 SGsav~~-~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~~~~~~~~~fRDP~vvw~ 155 (541)
T 2ac1_A 83 SGSATIL-PNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWL 155 (541)
T ss_dssp EEEEEEC-TTSCEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTTCCCTTSEECCCCCEE
T ss_pred cceEEEe-eCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCceeEEecCCCcEEcCCCCCCCCCCceECCeEEeE
Confidence 7775443 5889999987743 33446678889874 8999863 4555433 2 23577787 444
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0061 Score=66.33 Aligned_cols=131 Identities=10% Similarity=0.074 Sum_probs=81.7
Q ss_pred CCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCC---CcceEEEEEEcCCCCCccceeecCCCCceEec--CCCCCCCC
Q 008686 106 IYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAG---NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP--ADQIDPGS 180 (557)
Q Consensus 106 L~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~--p~~~~~~~ 180 (557)
+.|...| +=.+..++..+|+++|||.-+... +...-++|+|+| |.||+.. .++|.+ .|..+...
T Consensus 13 ~~P~~gw----~NDPnG~~~~~G~yHlfyQ~~P~~~~wg~~~WgHa~S~D-----lv~W~~~--~~al~~~g~P~~d~~g 81 (518)
T 1y4w_A 13 FSPQKNW----MNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISED-----LTHWEEK--PVALLARGFGSDVTEM 81 (518)
T ss_dssp CCCSSEE----EEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESS-----SSSCEEE--EEEECCBTTTSCCCBE
T ss_pred eeCCcCc----eECCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCC-----CccEEEC--CceEecCCCCCCCCCc
Confidence 5555533 233443333599999999865432 345678999998 4899985 355511 11123456
Q ss_pred ccCCeEEEecCCC----------eEEEEEeeecC-C------------ccEEEEEEeCC-CCCCEEc--ccccccCCC--
Q 008686 181 FRDPTTAWIGPDK----------IWRVIIGSKIN-D------------TGLAILYRSKD-FVNWTKA--EQSLYSTNQ-- 232 (557)
Q Consensus 181 fRDP~V~~~~~~g----------~~~m~~ga~~~-~------------~G~i~ly~S~D-l~~W~~~--~~~~~~~~~-- 232 (557)
.-++.++.. .+| +++|++.+... . .-.+.++.|+| +.+|+.. +.|+...+.
T Consensus 82 ~~SGsav~~-~~~~~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g~~w~k~~~~~pvi~~~~~~ 160 (518)
T 1y4w_A 82 YFSGSAVAD-VNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSP 160 (518)
T ss_dssp EEEEEEEEC-TTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTTSSCEECTTTCCSBCSCCTT
T ss_pred eEeeeEEEc-CCCccccccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCCceEEEcCCCCCeEecCCcc
Confidence 677876544 343 89999866431 1 23567888988 8899986 245554322
Q ss_pred ----CCceeecceEEecCCC
Q 008686 233 ----SGMWECPDFFPVSTKS 248 (557)
Q Consensus 233 ----~~~~ECPdlf~l~~~g 248 (557)
...+.-|.+|+.+..|
T Consensus 161 y~~~~~~fRDP~V~~~~~~g 180 (518)
T 1y4w_A 161 YEAEYQNFRDPFVFWHDESQ 180 (518)
T ss_dssp CGGGTTSEEEEEEEEETTTT
T ss_pred cccCCCCcCCCcEeEECCCC
Confidence 2568899999875334
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0088 Score=65.02 Aligned_cols=142 Identities=11% Similarity=0.068 Sum_probs=90.8
Q ss_pred ECCEEEEEEEEecCC-----CeEEEEEE-------eCC---CCcceecCCCCCCCCCc--------------CCCceEee
Q 008686 70 YKGIYHFFYQYKLWD-----TVVWGHST-------STD---MVNWTPHDAAIYPSQPF--------------DANSCWSG 120 (557)
Q Consensus 70 ~~G~YHlfyq~~~~g-----~~~Wgha~-------S~D---lvhW~~~~~aL~P~~~~--------------d~~gv~SG 120 (557)
.+|++||||..+.++ ....+.++ |+| +..|+..++.+.|+..+ +....-.+
T Consensus 204 ~DG~l~LFYTG~~~~~~~~~~Q~Ia~a~~~l~~~~s~dgv~~~kw~~~~~l~~~dg~~Yqt~~q~~~~~~~~~~~~FRDP 283 (571)
T 2yfr_A 204 KDGSIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGYHYQTYDQWKETNKGADNIAMRDA 283 (571)
T ss_dssp TTSCEEEEEEEEECTTTTCCEEEEEEEEEEEEEEGGGTEEEEEEEEEEEEEECCCSSSBCCHHHHHHHCSSCCCCCCEEE
T ss_pred cCCEEEEEEeccccCCCCcccceEEEEEeeeeecccCCCcceecccCCCceecCCCcccccccccccccccCCcccCcCC
Confidence 599999999997221 24555532 467 45676666667776422 33456678
Q ss_pred eEEEccCCeEEEEEeeecCCC-----------------------------------------cceEEEEEEcCCCCCccc
Q 008686 121 SVTILPGGNPAVLYTGIDAGN-----------------------------------------KQVQNLAVPKNLSDPYLK 159 (557)
Q Consensus 121 sav~~~dg~~~l~YTg~~~~~-----------------------------------------~~~q~lA~s~d~~d~~l~ 159 (557)
.++.+++|++||++.+..... ...++|+.|.|.. ..+.
T Consensus 284 ~Vf~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~-~n~~ 362 (571)
T 2yfr_A 284 HVIDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDV-KNPS 362 (571)
T ss_dssp EEEECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCT-TSCC
T ss_pred eEEEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCc-CCcc
Confidence 888754599999998875321 2456788886632 1136
Q ss_pred eeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCC----------------ccEEEEEEeCCCC
Q 008686 160 EWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND----------------TGLAILYRSKDFV 218 (557)
Q Consensus 160 ~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~----------------~G~i~ly~S~Dl~ 218 (557)
.|+-. .|++.+.. ....+.-|.+ ++ .+|+|||++..+... ...+..|.|+.+.
T Consensus 363 ~We~~--~pL~~~~~--v~dm~EcP~l-f~-~dG~yyL~~S~q~~~~t~~~~~~~A~g~~g~~~~~y~~vSdsl~ 431 (571)
T 2yfr_A 363 VAKVY--SPLISAPM--VSDEIERPDV-VK-LGNKYYLFAATRLNRGSNDDAWMATNKAVGDNVAMIGYVSDNLT 431 (571)
T ss_dssp EEEEC--CCSEECTT--TBSCCEEEEE-EE-ETTEEEEEEEEEGGGBSCHHHHHHHHHHHSCCEEEEEEEESSSS
T ss_pred cceec--cccccCCC--cCceeecCcE-EE-ECCEEEEEEeCCCCcccccccccccccCcCCceEEEEEEeCCCC
Confidence 89853 57775432 1346789985 44 589999998776411 1244567888874
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0036 Score=68.16 Aligned_cols=118 Identities=10% Similarity=0.101 Sum_probs=76.0
Q ss_pred eeeEEEccCCeEEEEEeeecCC---CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeE
Q 008686 119 SGSVTILPGGNPAVLYTGIDAG---NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIW 195 (557)
Q Consensus 119 SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~ 195 (557)
++..++..+|+|+|||.-+... +...-+.|+|+| |.+|+..+ ++|.|...++....-.+.++-. .+|++
T Consensus 54 DPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~D-----LvhW~~~~--~aL~P~~~~d~~g~~SGSav~~-~dg~~ 125 (526)
T 3pij_A 54 DPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTD-----MLNWKREP--IMFAPSLEQEKDGVFSGSAVID-DNGDL 125 (526)
T ss_dssp EEEEEEEETTEEEEEEEEETTCSSSCSBEEEEEEESS-----SSSEEECC--CCBCCCBGGGTTEEEEEEEEEC-TTSCE
T ss_pred CCeEEEEECCEEEEEEEcCCCCCCcCCcEEEEEEeCC-----CCCceeCe--eccCCCCccccCCeEeceEEEc-cCCEE
Confidence 3443444599999999866432 335678999998 48999853 5565543345556667775533 57789
Q ss_pred EEEEeeec-----CCc----cEEEEEEeCCC--CCCEEcccccccCCC---CCceeecceEEec
Q 008686 196 RVIIGSKI-----NDT----GLAILYRSKDF--VNWTKAEQSLYSTNQ---SGMWECPDFFPVS 245 (557)
Q Consensus 196 ~m~~ga~~-----~~~----G~i~ly~S~Dl--~~W~~~~~~~~~~~~---~~~~ECPdlf~l~ 245 (557)
+|++.+.. +.. -...++.|+|+ .+|+..+ ++...+. ...+.=|.+|+-+
T Consensus 126 ~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~gl~~w~K~~-pvi~~P~~~~~~~fRDP~V~~~~ 188 (526)
T 3pij_A 126 RFYYTGHRWANGHDNTGGDWQVQMTALPDNDELTSATKQG-MIIDCPTDKVDHHYRDPKVWKTG 188 (526)
T ss_dssp EEEEEEEEETTSSSGGGCEEEEEEEEEESSTTCSCEEEEE-EEECCCGGGEEEEEEEEEEEEET
T ss_pred EEEEecccCcccccCCCCceeEEEEEEECCCCcceEEECC-ccccCCCCccccccccCEEEEEC
Confidence 88886652 111 24678889887 8999876 3432221 1357778888843
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.014 Score=63.00 Aligned_cols=111 Identities=10% Similarity=0.028 Sum_probs=73.5
Q ss_pred EEccCCeEEEEEeeecCC--CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCC-------
Q 008686 123 TILPGGNPAVLYTGIDAG--NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDK------- 193 (557)
Q Consensus 123 v~~~dg~~~l~YTg~~~~--~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g------- 193 (557)
++..+|+|+|||.-+... ... -+.|+|+| |.+|+..+ ++|.|.+ ....-.+.++-. .++
T Consensus 19 ~~y~~G~YHlFYQ~~P~~~~~g~-WgHa~S~D-----LvhW~~~~--~aL~P~~---~~g~~SGSav~~-~~~~~g~~~~ 86 (492)
T 4ffh_A 19 PVTTHGAYQLYYLHSDQNNGPGG-WDHASTTD-----GVAFTHHG--TVMPLRP---DFPVWSGSAVVD-TANTAGFGAG 86 (492)
T ss_dssp EEEETTEEEEEEEEESSTTCCCE-EEEEEESS-----SSSCEEEE--EEECCBT---TBCCCCEEEEEE-TTCSSSSCTT
T ss_pred eEEECCEEEEEEECCCCCCCCCc-EEEEEeCC-----CCccEECC--CCCCCCC---CCCEEeceEEEe-CCCccccCCC
Confidence 333589999999865432 112 78999998 58999853 5555432 345667775544 444
Q ss_pred eEEEEEeeecC---CccEEEEEEeCC-CCCCEEcccccccCCCCCc------------eeecceEEec
Q 008686 194 IWRVIIGSKIN---DTGLAILYRSKD-FVNWTKAEQSLYSTNQSGM------------WECPDFFPVS 245 (557)
Q Consensus 194 ~~~m~~ga~~~---~~G~i~ly~S~D-l~~W~~~~~~~~~~~~~~~------------~ECPdlf~l~ 245 (557)
.++|++.+... ..-...++.|+| +.+|+..+.|+...+.... +.-|.+|+.+
T Consensus 87 ~~~l~YTg~~~~~~~~q~q~lA~S~D~g~~w~k~~nPvi~~p~~~~~~~~~~~~~~~~fRDP~V~~~~ 154 (492)
T 4ffh_A 87 AVVALATQPTDGVRKYQEQYLYWSTDGGFTFTALPDPVIVNTDGRAATTPAEIENAEWFRDPKIHWDT 154 (492)
T ss_dssp EEEEEEEEEGGGCGGGEEEEEEEESSSSSSCEECSSCSBCCTTTTTCCSHHHHHHHTCEEEEEEEEET
T ss_pred cEEEEEeecccCCCCcEEEEEEEeCCCCceEEEcCccccCCCCccccccccccccCCCCcCCEEEEEC
Confidence 48888876532 233567889998 6899987556654322233 8899999864
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.15 Score=52.58 Aligned_cols=183 Identities=12% Similarity=0.077 Sum_probs=100.9
Q ss_pred cccCCCCCccCCcce----EE-ECCEEEEEEEEecC--CCeEEEEEEeCCC-CcceecCCCCCCCCCcCCCceEeeeEEE
Q 008686 53 HFQPPSSWMNDPNGP----MI-YKGIYHFFYQYKLW--DTVVWGHSTSTDM-VNWTPHDAAIYPSQPFDANSCWSGSVTI 124 (557)
Q Consensus 53 H~~p~~gw~nDPnG~----~~-~~G~YHlfyq~~~~--g~~~Wgha~S~Dl-vhW~~~~~aL~P~~~~d~~gv~SGsav~ 124 (557)
=|.|+.++ .|++.. +. .+|.+-+++..... +..+++..+|+|. .+|++......+...+ .-|+.++++.
T Consensus 11 if~~~~~~-~~~~~~yp~~v~L~dG~lLa~~~~~~~~~~~~~~~v~rS~DgG~TW~~~~~v~~~~~g~--~~~~~P~l~~ 87 (355)
T 3a72_A 11 IFSPPSDY-IVPRTLYPRNEQLPNGDLLATWENYSPEPPAVYFPIYRSKDHGKTWNEISRVHDTVNGY--GLRYQPFLYS 87 (355)
T ss_dssp EECCCTTS-CTTSEEEEEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTTSCCEEEEEECCTTTSS--CEEEEEEEEE
T ss_pred EecCCccc-CCCCCccceEEEcCCCCEEEEEEeecCCCCCceEEEEEEcCCCcCcCCCcccCCCcCCc--ccccCCcEEe
Confidence 35666653 466422 22 38887777665533 5567788899996 8999865433222222 1244677666
Q ss_pred cc-------CCeEEEEEeeecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecC-CCC--CCCCccCCeEEEecCCC
Q 008686 125 LP-------GGNPAVLYTGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPA-DQI--DPGSFRDPTTAWIGPDK 193 (557)
Q Consensus 125 ~~-------dg~~~l~YTg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p-~~~--~~~~fRDP~V~~~~~~g 193 (557)
.+ +|++.+.+.....+ ....+.+..|+|+| ++|++.. .+.... +.. .....-.|++. . .+|
T Consensus 88 lp~~v~~~~~G~ll~~~~~~~~d~~~~~~~v~~S~D~G----~TW~~~~--~i~~~~~~~~~~g~~~v~eP~~~-~-~~G 159 (355)
T 3a72_A 88 LPERVGSFKKGTLLLAGSSIPTDLSSTDIVLYASQDDG----MTWDFVS--HIAAGGEARPNNGLTPVWEPFLL-A-NKG 159 (355)
T ss_dssp CSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSTT----SCCEEEE--EEEEESCSSCCTTCCCEEEEEEE-E-ETT
T ss_pred cCcccccCCCCcEEEEEeeecCCCCCceEEEEEECCCC----ccCccCc--cccccCccccccCCCccccceEE-c-cCC
Confidence 55 78877765433221 23456788999986 8999852 332211 110 00112245532 2 467
Q ss_pred eEEEEEeeec-C--CccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEecC
Q 008686 194 IWRVIIGSKI-N--DTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVST 246 (557)
Q Consensus 194 ~~~m~~ga~~-~--~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~ 246 (557)
+.++++..+. + ....+.+..|+|+++|...............--.|.+.+|.+
T Consensus 160 ~l~~~~~~~~~~~~~~~~~~~~~S~DG~TWs~~~~~~~~~~~~~rpg~p~v~~l~d 215 (355)
T 3a72_A 160 KLICYYSDQRDNATYGQTMVHQVTNDLKNWGPVVEDVTYPTYTDRPGMPVVTKLPN 215 (355)
T ss_dssp EEEEEEEECCCTTTCSCEEEEEEESSSSSCCCCEEEECCSSTTCEEEEEEEEECTT
T ss_pred eEEEEECCCCCCCCCCcEEEEEECCCCCCCCCCeeccccCccCCCCCceEEEECCC
Confidence 8777775443 1 223566778999999965322111111111223478888874
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=96.50 E-value=0.27 Score=50.84 Aligned_cols=183 Identities=11% Similarity=0.141 Sum_probs=101.2
Q ss_pred cccCCCCCccCCcce----EE-ECCEEEEEEEEecC--CCeEEEEEEeCCC-CcceecCCCCCCCCCcCCCceEeeeEEE
Q 008686 53 HFQPPSSWMNDPNGP----MI-YKGIYHFFYQYKLW--DTVVWGHSTSTDM-VNWTPHDAAIYPSQPFDANSCWSGSVTI 124 (557)
Q Consensus 53 H~~p~~gw~nDPnG~----~~-~~G~YHlfyq~~~~--g~~~Wgha~S~Dl-vhW~~~~~aL~P~~~~d~~gv~SGsav~ 124 (557)
=|.|+.+ .+|+++. +. .+|.+-++|..... +..++...+|+|. .+|++......+...+ .-|+.++++.
T Consensus 16 if~~~~~-~~~~~~~yp~~v~L~dG~LLa~~~~~~~~~~~~~~~v~rS~DgG~TW~~~~~v~~~~~g~--~~~~~P~l~~ 92 (367)
T 2ydt_A 16 IFDPPTN-YRDPQVLYARPLELSDGTLLGTWENYSPEPPNVWFPIVKSKDGGKTWKEISKVKDTQNNW--GLRYQPQLYE 92 (367)
T ss_dssp EECCCTT-SCTTSEEEEEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTTSSCEEEEEECCCSSSS--CEEEEEEEEE
T ss_pred EecCCcc-cCCCCCCceeEEEcCCCCEEEEEEeccCCCCCeEEEEEEECCCCcCcCcCcccCCCCCCc--ccccCCeEEE
Confidence 3556665 3366422 22 38888887765533 5677888999996 8999865433232222 2245777766
Q ss_pred cc-------CCeEEEEEeeecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCC---CCCCccCCeEEEecCCC
Q 008686 125 LP-------GGNPAVLYTGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQI---DPGSFRDPTTAWIGPDK 193 (557)
Q Consensus 125 ~~-------dg~~~l~YTg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~---~~~~fRDP~V~~~~~~g 193 (557)
.+ +|++.+.+.....+ ....+.+..|+|+| ++|++. ..|....... .....-+|+++ . .+|
T Consensus 93 lP~~i~~~~~G~lL~~~~s~~~d~~~~~i~v~~S~D~G----~TW~~~--~~i~~g~~~~~~~g~~~v~eP~~~-~-~~G 164 (367)
T 2ydt_A 93 LPRAFGKYPKGTVLCSGSSIPSDLSETLIEVYASRDKG----YTWEFV--SHVALGGEALPNPGLTPVWEPFLM-T-YKE 164 (367)
T ss_dssp CSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSSS----SCCEEE--EEEEEESCSSCCTTCCCEEEEEEE-E-ETT
T ss_pred ccccccccCCCcEEEEEecccCCCCCCeEEEEEECCCC----CCCcCC--eecccCCCcccccCCCccccceEE-C-CCC
Confidence 54 67777766543221 23456788899986 899974 2333221110 00112256532 2 467
Q ss_pred eEEEEEeeecC--Ccc-EEEEEEeCCCCCCEEcccccccCCCCCceeecceEEecC
Q 008686 194 IWRVIIGSKIN--DTG-LAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVST 246 (557)
Q Consensus 194 ~~~m~~ga~~~--~~G-~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~ 246 (557)
+.++++....+ ..+ .+.+..|+|+++|...............-..|.+.+|.+
T Consensus 165 ~l~v~~~d~~~~~~~~q~l~~~~S~DG~TWs~~~~~~~~~~~~~rpg~p~v~~l~d 220 (367)
T 2ydt_A 165 KLILYYSDQRDNATHSQKLVHQTTTDLKKWSKVVDDTKYANYYARPGMPTVAKLPN 220 (367)
T ss_dssp EEEEEEEECCSTTTCSSEEEEEEESSSSSCCCCEEEECCSSTTCEEEEEEEEECTT
T ss_pred cEEEEECCCCCCCCCCcEEEEEECCCCCCCCCceeccccCCcCCCCCcceEEECCC
Confidence 77766654432 223 467778999999965322111111122233577778873
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.03 Score=61.15 Aligned_cols=82 Identities=12% Similarity=0.073 Sum_probs=54.1
Q ss_pred CCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccccccCC--------------
Q 008686 166 ENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTN-------------- 231 (557)
Q Consensus 166 ~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~-------------- 231 (557)
.||||. ..+-||.|+.. ++.|||+..+. +....+-+|+|+||.+|+..+..+....
T Consensus 9 ~NPil~-------g~~~DP~iir~--~~~YY~~~st~-~~~pg~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~~~~~~ 78 (542)
T 3zxk_A 9 TNPVLW-------EDHPALEVFRV--GSVFYYSSSTF-AYSPGAPVLKSYDLVHWTPVTHSVPRLNFGSNYDLPSGTPGA 78 (542)
T ss_dssp ESCSCC-------SCCCSCEEEEE--TTEEEEECCCB-TEESEEEEEEESSSSSCEEEEEEESSCCSCGGGGCCSSTTTT
T ss_pred cCCccC-------CCCCCCeEEEE--CCEEEEEEecC-ccCCCeEEEEcCCCCCccccccccccCCccccccccCCcccc
Confidence 378874 24679997644 67899875442 2223478999999999999986542210
Q ss_pred CCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 232 QSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 232 ~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
.....-.|++...+..| +++|.++.+
T Consensus 79 ~~~~~WAP~i~~~~~~G-------------~fYly~~~~ 104 (542)
T 3zxk_A 79 YVKGIWASTLRYRRSND-------------RFYWYGCVE 104 (542)
T ss_dssp TTCSBCSCEEEEETTTT-------------EEEEEEEET
T ss_pred cCCceECCcEEEECCCC-------------EEEEEEECC
Confidence 12345578887775223 788877664
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=96.08 E-value=0.068 Score=57.81 Aligned_cols=110 Identities=15% Similarity=0.094 Sum_probs=70.4
Q ss_pred CCeEEEEEeeecCC---C-cceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEec------------
Q 008686 127 GGNPAVLYTGIDAG---N-KQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIG------------ 190 (557)
Q Consensus 127 dg~~~l~YTg~~~~---~-~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~------------ 190 (557)
+|+|+|||.-+... + ...-++|+|+| |.||+..+ ++|.|.. +....-...++-.+
T Consensus 34 ~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~D-----LvhW~~~~--~aL~P~~--d~~G~~SGSav~d~~~t~g~~~~~~~ 104 (509)
T 3kf3_A 34 AKLWHLYFQYNPNATAWGQPLYWGHATSND-----LVHWDEHE--IAIGPEH--DNEGIFSGSIVVDHNNTSGFFNSSID 104 (509)
T ss_dssp TTEEEEEEEEETTCSSCCSSBEEEEEEESS-----SSSCEECS--CCBCCSS--TTCEEEEEEEEECTTCTTSCCCTTSC
T ss_pred CCEEEEEEecCCCCCCCCCcCEEEEEEccC-----CCCcEECc--ccccccc--cCCCEEeceEEEeCCccccccccccC
Confidence 69999999755332 2 24568999998 58999853 5665432 23344555543321
Q ss_pred CCCeEEEEEeeecCCccEEEEEEeCC-CCCCEEcc-cccccCCCCCceeecceEEecC
Q 008686 191 PDKIWRVIIGSKINDTGLAILYRSKD-FVNWTKAE-QSLYSTNQSGMWECPDFFPVST 246 (557)
Q Consensus 191 ~~g~~~m~~ga~~~~~G~i~ly~S~D-l~~W~~~~-~~~~~~~~~~~~ECPdlf~l~~ 246 (557)
.+++++|++.+.....-...++.|+| +.+|+... .|+... ....+.-|.+|..+.
T Consensus 105 p~~~l~~~YTg~~~~~q~q~lA~S~D~g~~~~k~~~nPVi~~-~~~~fRDPkVfw~~~ 161 (509)
T 3kf3_A 105 PNQRIVAIYTNNIPDNQTQDIAFSLDGGYTFTKYENNPVIDV-SSNQFRDPKVFWHED 161 (509)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEESSSSSSCEECTTCCSBCC-SCSSCEEEEEEEETT
T ss_pred CCCceEEEECCCCCCCeeEEEEEECCCCcceEEcCCCceEcC-CCCcccCCeEEEECC
Confidence 13578888876443344567888988 68999864 355432 234678899987653
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=95.76 E-value=0.11 Score=55.79 Aligned_cols=126 Identities=15% Similarity=0.046 Sum_probs=80.1
Q ss_pred EECCEEEEEEEEe---cC--C------CeEEEEEE-----eCCCCccee---cCCCCCCCCCcC-------CCceEeeeE
Q 008686 69 IYKGIYHFFYQYK---LW--D------TVVWGHST-----STDMVNWTP---HDAAIYPSQPFD-------ANSCWSGSV 122 (557)
Q Consensus 69 ~~~G~YHlfyq~~---~~--g------~~~Wgha~-----S~DlvhW~~---~~~aL~P~~~~d-------~~gv~SGsa 122 (557)
..||+++|||... .- + ....++|+ |.|.++|+. +++.+.|+..+. ....-.+.+
T Consensus 170 ~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~~~~~fRDP~v 249 (496)
T 3vss_A 170 SKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQNEFFNFRDPFT 249 (496)
T ss_dssp CTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEE
T ss_pred CCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhccccccccccCCCee
Confidence 3699999999976 11 1 23566665 678777654 456677775432 123456777
Q ss_pred EEc--cCCeEEEEEeeecCC-C---------------------------------cceEEEEEEcCCCCCccceeecCCC
Q 008686 123 TIL--PGGNPAVLYTGIDAG-N---------------------------------KQVQNLAVPKNLSDPYLKEWIKPPE 166 (557)
Q Consensus 123 v~~--~dg~~~l~YTg~~~~-~---------------------------------~~~q~lA~s~d~~d~~l~~w~k~~~ 166 (557)
+.+ .+|..||++.|+... + ...++||..++. .+..|+-.
T Consensus 250 f~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~---D~~~We~~-- 324 (496)
T 3vss_A 250 FEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNK---QLTEWEFL-- 324 (496)
T ss_dssp ECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESST---TSCCEEEE--
T ss_pred EecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCC---CCCccEEe--
Confidence 765 368899999886431 0 123566766542 25789865
Q ss_pred CceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec
Q 008686 167 NPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI 203 (557)
Q Consensus 167 ~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~ 203 (557)
.|++.+... ...+.-|.|| + .+|+||++..++.
T Consensus 325 ~PL~~a~~v--~deiErP~vf-~-~dGKyYLFt~s~~ 357 (496)
T 3vss_A 325 PPILSANCV--TDQTERPQIY-F-KDGKSYLFTISHR 357 (496)
T ss_dssp EEEEEEETT--BSCCEEEEEE-E-ETTEEEEEEEECS
T ss_pred CccccCCCC--CCceeCCcEE-E-ECCEEEEEEeccc
Confidence 488865332 3467899965 4 4899999987654
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.72 Score=47.37 Aligned_cols=163 Identities=15% Similarity=0.017 Sum_probs=90.1
Q ss_pred CCEEEEEEEEec--CCCeEEEEEEeCCC-CcceecCC-CCC--CCCCcCCCceEeeeEEEccCCeEEEEEeeec--CCCc
Q 008686 71 KGIYHFFYQYKL--WDTVVWGHSTSTDM-VNWTPHDA-AIY--PSQPFDANSCWSGSVTILPGGNPAVLYTGID--AGNK 142 (557)
Q Consensus 71 ~G~YHlfyq~~~--~g~~~Wgha~S~Dl-vhW~~~~~-aL~--P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~--~~~~ 142 (557)
+|+..+.+.... .........+|+|. .+|+.... +-. |.......++|.+-.+ ..+|+++++|.... ....
T Consensus 97 ~G~ll~~~~~~~~d~~~~~~~v~~S~D~G~TW~~~~~i~~~~~~~~~~g~~~v~eP~~~-~~~G~l~~~~~~~~~~~~~~ 175 (355)
T 3a72_A 97 KGTLLLAGSSIPTDLSSTDIVLYASQDDGMTWDFVSHIAAGGEARPNNGLTPVWEPFLL-ANKGKLICYYSDQRDNATYG 175 (355)
T ss_dssp TTCEEEEEEECCTTCCCEEEEEEEESSTTSCCEEEEEEEEESCSSCCTTCCCEEEEEEE-EETTEEEEEEEECCCTTTCS
T ss_pred CCcEEEEEeeecCCCCCceEEEEEECCCCccCccCccccccCccccccCCCccccceEE-ccCCeEEEEECCCCCCCCCC
Confidence 676666544321 12345567778885 89998643 111 1111233468888444 46899999997442 1234
Q ss_pred ceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccC--CeEEEecCCCeEEEEEeeecC----C-ccEEEEEEeC
Q 008686 143 QVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRD--PTTAWIGPDKIWRVIIGSKIN----D-TGLAILYRSK 215 (557)
Q Consensus 143 ~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRD--P~V~~~~~~g~~~m~~ga~~~----~-~G~i~ly~S~ 215 (557)
+...+++|+| | ++|.+. .++. .+.. ...|+ |.|+ .-.+|+++|++-.... . +..+.+-.|+
T Consensus 176 ~~~~~~~S~D-G----~TWs~~--~~~~-~~~~---~~~rpg~p~v~-~l~dG~l~l~y~~~~~~~~~~~~~~~~~~iS~ 243 (355)
T 3a72_A 176 QTMVHQVTND-L----KNWGPV--VEDV-TYPT---YTDRPGMPVVT-KLPNGQYFYVYEYGSFFGTETYSFPLYYRLSS 243 (355)
T ss_dssp CEEEEEEESS-S----SSCCCC--EEEE-CCSS---TTCEEEEEEEE-ECTTSCEEEEEEEEBCTTSSSCBCBEEEEEES
T ss_pred cEEEEEECCC-C----CCCCCC--eecc-ccCc---cCCCCCceEEE-ECCCCCEEEEEEECCCcccCCCceeEEEEECC
Confidence 5667788988 4 799752 1222 2211 12232 3443 3368999998765431 1 2235666689
Q ss_pred CCCCCEEcc-cccccCCCCCceeecceEEecC
Q 008686 216 DFVNWTKAE-QSLYSTNQSGMWECPDFFPVST 246 (557)
Q Consensus 216 Dl~~W~~~~-~~~~~~~~~~~~ECPdlf~l~~ 246 (557)
|..+|.... ..+...+....+..|-+...+.
T Consensus 244 DG~tw~~~~~~~~~~~~~~~~~g~p~v~~~~~ 275 (355)
T 3a72_A 244 DPENIASAPGQRLVVSSGTQPTSSPYAVWTPY 275 (355)
T ss_dssp STTCCTTSCCEECCBTTCCCCBSSCEEEEEST
T ss_pred CcccccCcCCcceecCCCcccCCCCeEEECcC
Confidence 999996442 1122222223578886665543
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=95.21 E-value=0.31 Score=50.46 Aligned_cols=170 Identities=14% Similarity=0.154 Sum_probs=93.7
Q ss_pred cCCCCCCCCCCcccccccCCC--CC------ccCCcceEEECCEEEEEEEEe-c--CCCeEEEEEEeCCCCcceecCCCC
Q 008686 38 SFSSSITSQPYRTGYHFQPPS--SW------MNDPNGPMIYKGIYHFFYQYK-L--WDTVVWGHSTSTDMVNWTPHDAAI 106 (557)
Q Consensus 38 ~~~~~~~~~~~rp~yH~~p~~--gw------~nDPnG~~~~~G~YHlfyq~~-~--~g~~~Wgha~S~DlvhW~~~~~aL 106 (557)
-+.|.+....|.+.-++.... .+ +.+| -++..+|...++|... . .....+.|++|+|+.+|...-. +
T Consensus 123 v~~S~D~G~TW~~~~~i~~g~~~~~~~g~~~v~eP-~~~~~~G~l~v~~~d~~~~~~~~q~l~~~~S~DG~TWs~~~~-~ 200 (367)
T 2ydt_A 123 VYASRDKGYTWEFVSHVALGGEALPNPGLTPVWEP-FLMTYKEKLILYYSDQRDNATHSQKLVHQTTTDLKKWSKVVD-D 200 (367)
T ss_dssp EEEESSSSSCCEEEEEEEEESCSSCCTTCCCEEEE-EEEEETTEEEEEEEECCSTTTCSSEEEEEEESSSSSCCCCEE-E
T ss_pred EEEECCCCCCCcCCeecccCCCcccccCCCccccc-eEECCCCcEEEEECCCCCCCCCCcEEEEEECCCCCCCCCcee-c
Confidence 345556667787765543211 11 1134 3345799999999655 2 2245789999999999975421 1
Q ss_pred CCCCCcC-CCceEeeeEEEccCCeEEEEEeeecCC-------CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCC
Q 008686 107 YPSQPFD-ANSCWSGSVTILPGGNPAVLYTGIDAG-------NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDP 178 (557)
Q Consensus 107 ~P~~~~d-~~gv~SGsav~~~dg~~~l~YTg~~~~-------~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~ 178 (557)
.+...+. ..| -..++...||+++|.|.-.... ......+++|.|+ .+|......+++. +.+ .
T Consensus 201 ~~~~~~~~rpg--~p~v~~l~dG~l~~~y~~~~~~~~~~~~~~~~~~~~~~S~DG-----~tw~~~~~~~l~~-~~~--~ 270 (367)
T 2ydt_A 201 TKYANYYARPG--MPTVAKLPNNEYIYVYEYGGGPNPPAGSDYWFPVYYRLSKDP-----QKFLNKAHHQIVS-NDG--T 270 (367)
T ss_dssp ECCSSTTCEEE--EEEEEECTTSCEEEEEEEETCSCCCTTCSCCCBEEEEEESST-----TCCTTSCCEECCC-TTC--C
T ss_pred cccCCcCCCCC--cceEEECCCCcEEEEEEecCCCCcccccccccceEEEEcCCc-----cccCCcCCceeec-CCC--c
Confidence 1211111 112 1345556789999988754311 1234567888875 6898753222322 222 1
Q ss_pred CCccCCeEEEec---CCCeEEEEEeeecCCccEEEEEEeCCC-C--CCEEccc
Q 008686 179 GSFRDPTTAWIG---PDKIWRVIIGSKINDTGLAILYRSKDF-V--NWTKAEQ 225 (557)
Q Consensus 179 ~~fRDP~V~~~~---~~g~~~m~~ga~~~~~G~i~ly~S~Dl-~--~W~~~~~ 225 (557)
..---|+++|.. .+|+-++. +. . .. .+|.|.|+ . .|+....
T Consensus 271 ~~~~sp~v~~~p~~~~~g~l~~s-~~-~--~~--~v~~~~~~g~~~~W~~~~~ 317 (367)
T 2ydt_A 271 TPAGSPYVVWTPYGGKNGTIVVS-CG-T--RS--EIFTNQALGDASAWKKWDV 317 (367)
T ss_dssp CCBSSCEEEEESTTSTTCEEEEE-CS-S--CS--CEEEESSTTCTTCCEEECC
T ss_pred ccCcCceEEECcCCCCCCeEEEE-cC-C--Cc--eEEEECCCCCCCcceeccC
Confidence 234678888863 34533322 22 1 11 36777654 4 7987643
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=95.11 E-value=0.067 Score=59.27 Aligned_cols=109 Identities=16% Similarity=0.141 Sum_probs=68.0
Q ss_pred cCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCC--CceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec
Q 008686 126 PGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPE--NPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI 203 (557)
Q Consensus 126 ~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~--~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~ 203 (557)
.+|.|+|||--+.. + -+.|+|+| |.||+..+. .+.|.|...++....-.-.++-...+|+.+|++.+-.
T Consensus 50 ~~G~YHlFYQ~~P~-g---WgHa~S~D-----LvhW~~~~~~~~~aL~P~~~~D~~G~~SGSav~~~~~g~~~~~YTg~~ 120 (634)
T 3lig_A 50 STGLFHVGFLHDGD-G---IAGATTAN-----LATYTDTSDNGSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVS 120 (634)
T ss_dssp TTCCEEEEEEETTS-C---EEEEEESS-----SSCCEESCSTTCEEECSCSSSCSSEEEEEEEESSCGGGSCEEEEEEEC
T ss_pred CCCEEEEEEecCCC-c---eeEEEecC-----cCceeECcCCCCceecCCCCCCCCCcEeeEEEEECCCCEEEEEEEecc
Confidence 48999999985432 2 78999998 589998632 4666655444444444444332212678888886542
Q ss_pred -----------CCccEEEEEEeCC-CCCCEEcc-cccccC-CCC---CceeecceEE
Q 008686 204 -----------NDTGLAILYRSKD-FVNWTKAE-QSLYST-NQS---GMWECPDFFP 243 (557)
Q Consensus 204 -----------~~~G~i~ly~S~D-l~~W~~~~-~~~~~~-~~~---~~~ECPdlf~ 243 (557)
.+.-...++.|+| +.+|+... .|+... +.+ .-|-=|-+|+
T Consensus 121 ~~~~~~~~~~~~~~q~Q~lA~S~D~g~~w~K~~~nPVi~~~p~g~~~~~fRDPkV~~ 177 (634)
T 3lig_A 121 FLPIHWSIPYTRGSETQSLAVARDGGRRFDKLDQGPVIADHPFAVDVTAFRAPFVFR 177 (634)
T ss_dssp SCCCCTTSCCCTTSEEEEEEEEEGGGTEEEECSSSCSBCSSSTTCCEEEEEEEEEEC
T ss_pred cccccccCcCCCCcEEEEEEEECCCCCEEEECCCCceEcCCCcccCCCccCCCeEcc
Confidence 1122456788876 78999874 355532 222 2467788887
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=94.42 E-value=0.14 Score=55.55 Aligned_cols=142 Identities=15% Similarity=0.187 Sum_probs=84.3
Q ss_pred ccCCcceEEE--CCEEEEEEEEe-c------C-C---------CeEEEEEEeCC-CCcceecCCCCCCC---CCcCCCce
Q 008686 61 MNDPNGPMIY--KGIYHFFYQYK-L------W-D---------TVVWGHSTSTD-MVNWTPHDAAIYPS---QPFDANSC 117 (557)
Q Consensus 61 ~nDPnG~~~~--~G~YHlfyq~~-~------~-g---------~~~Wgha~S~D-lvhW~~~~~aL~P~---~~~d~~gv 117 (557)
..||+ ++++ +|+.+|||.+. . | + .......+|+| ..+|.+. ..|.+. ..| ..+
T Consensus 248 ~~nP~-lvvD~~tG~I~L~~~~~~g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G~TWs~p-~~l~~~~~~~~~--~~~ 323 (523)
T 4fj6_A 248 VGDPS-ILVDEKTNTIWVVAAWTHGMGNERAWWNSMPGMTPDETAQLMLVKSEDDGKTWSEP-INITSQVKDPSW--YFL 323 (523)
T ss_dssp EEEEE-EEECTTTCCEEEEEEECCSCTTSCGGGTCCSSSSTTTSCEEEEEEESSTTSSCCCC-EECHHHHCCTTC--SEE
T ss_pred ccCce-EEEECCCCeEEEEEEecccccccccccccccCCCCCcceEEEEEEcCCCCccCCCC-eeecccccCCcc--eEE
Confidence 46884 6664 69999998774 1 1 0 12455677776 5999873 223222 112 122
Q ss_pred E--eeeEEEccCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeE
Q 008686 118 W--SGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIW 195 (557)
Q Consensus 118 ~--SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~ 195 (557)
+ .|+.+...+|++++--.+....+...-.+.+|+|.| .+|+... ++- ....+|.++-. ++|+.
T Consensus 324 ~~g~G~GI~l~dGrLv~P~~~~~~~g~~~s~i~~S~D~G----~TW~~~~--~~~--------~~~~e~~vve~-~dG~L 388 (523)
T 4fj6_A 324 LQGPGRGITMQDGTLVFPIQFIDATRVPNAGIMYSKDRG----KTWHLHN--LAR--------TNTTEAQVAEV-EPGVL 388 (523)
T ss_dssp EECSEECEECTTSCEEEEEEEECTTSCEEEEEEEESSTT----SSCEECC--CSE--------ETEEEEEEEEE-ETTEE
T ss_pred ecCCCcceEEeCCeEEEEEEEEcCCCCEEEEEEEECCCC----CeEEECC--CCC--------ccccCCEEEEe-cCCEE
Confidence 2 355566678987642222222334455677898875 8999753 221 13578886533 47887
Q ss_pred EEEEeeecCCccEEEEEEeCC-CCCCEEc
Q 008686 196 RVIIGSKINDTGLAILYRSKD-FVNWTKA 223 (557)
Q Consensus 196 ~m~~ga~~~~~G~i~ly~S~D-l~~W~~~ 223 (557)
+|.+.+... |...+|+|.| +..|+..
T Consensus 389 ~~~~R~~~~--g~r~v~~S~D~G~TWt~~ 415 (523)
T 4fj6_A 389 MLNMRDNRG--GSRAVATTKDLGKTWTEH 415 (523)
T ss_dssp EEEEEETTC--SBCEEEEESSTTSSCEEC
T ss_pred EEEEEecCC--CcEEEEEECCCCCccCcC
Confidence 776654322 4457889976 5899864
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=93.98 E-value=0.46 Score=51.38 Aligned_cols=129 Identities=16% Similarity=0.136 Sum_probs=72.7
Q ss_pred CCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCC---CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCc
Q 008686 105 AIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAG---NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSF 181 (557)
Q Consensus 105 aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~f 181 (557)
-+.|...| +=++..++..+|+|+|||.-+... +...-+.|+|+| |.||+..+ +.| ++.. -...
T Consensus 33 H~~P~~gw----mNDPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~D-----LvhW~~~~--~aL-~d~~--g~~~ 98 (516)
T 3sc7_X 33 HFTPDQYW----MNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTD-----LMHWAHKP--TAI-ADEN--GVEA 98 (516)
T ss_dssp SCCCSSEE----EEEEEEEEEETTEEEEEEEEETTCSTTCCCEEEEEEESS-----SSSCEEEE--EEE-CCBT--TEEE
T ss_pred eecCCcCC----cCCCeeeEEECCEEEEEEeCCCCCCccCCCEEEEEEeCC-----CCcceecC--ccc-cCCC--Ccee
Confidence 35555533 123333333589999999865432 234568899998 58999853 344 2211 1111
Q ss_pred cCCeEEEecCC----------CeEEEEEeeecC--CccEEEEEEeCC-CCCCEEcc-cccccCC-C---C----Cceeec
Q 008686 182 RDPTTAWIGPD----------KIWRVIIGSKIN--DTGLAILYRSKD-FVNWTKAE-QSLYSTN-Q---S----GMWECP 239 (557)
Q Consensus 182 RDP~V~~~~~~----------g~~~m~~ga~~~--~~G~i~ly~S~D-l~~W~~~~-~~~~~~~-~---~----~~~ECP 239 (557)
-...++-. .+ +.++|++.+-.. ..-...++.|+| +.+|+... .|+.... . . ..+.=|
T Consensus 99 ~SGSav~~-~~~~~g~~~~~~~~l~l~YTg~~~~~~~q~q~lA~s~D~g~~w~k~~~nPVi~~~~~~~~~~~~~~~fRDP 177 (516)
T 3sc7_X 99 FTGTAYYD-PNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSVDNGATWTKFQGNPIISTSQEAPHDITGGLESRDP 177 (516)
T ss_dssp EEEEEEEC-TTCTTSSSCSSSCCEEEEEEEEETTTTEEEEEEEEESSTTSCCEECTTCCSBCHHHHTTTCTTSSSSCEEE
T ss_pred EeceEEEe-CCcccccccCCCCeEEEEEeeeeCCCCceEEEEEEecCCCceEEEcCCCceEcCCCcccccccCCCcccCC
Confidence 33443323 22 258888766432 223467888887 58999864 3554321 0 1 146889
Q ss_pred ceEEecCCC
Q 008686 240 DFFPVSTKS 248 (557)
Q Consensus 240 dlf~l~~~g 248 (557)
.+|+.+..|
T Consensus 178 kV~~~~~~g 186 (516)
T 3sc7_X 178 KVFFHRQSG 186 (516)
T ss_dssp EEEEETTTT
T ss_pred eEEEECCCC
Confidence 999876333
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=92.98 E-value=1.7 Score=47.33 Aligned_cols=164 Identities=14% Similarity=0.021 Sum_probs=87.1
Q ss_pred eEEE-CCEEEEEEEEe-----cCCCeEEEEEEeCCC-CcceecCCCCCCCC-CcCCCceEeeeEEEc-cCCeEEEEEeee
Q 008686 67 PMIY-KGIYHFFYQYK-----LWDTVVWGHSTSTDM-VNWTPHDAAIYPSQ-PFDANSCWSGSVTIL-PGGNPAVLYTGI 137 (557)
Q Consensus 67 ~~~~-~G~YHlfyq~~-----~~g~~~Wgha~S~Dl-vhW~~~~~aL~P~~-~~d~~gv~SGsav~~-~dg~~~l~YTg~ 137 (557)
++.. +|....||... ..+.......+|+|. .+|+.... |..+. .-...++..++.+++ .+|+++|+|...
T Consensus 26 L~~~~~G~lla~~~~~~~~~~~~~~~~i~~~rS~DgG~TW~~~~~-l~~~~~~~~~~~~~~P~~~~d~~~g~i~l~~~~~ 104 (601)
T 1w8o_A 26 LTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGGRTWGEQQV-VSAGQTTAPIKGFSDPSYLVDRETGTIFNFHVYS 104 (601)
T ss_dssp EEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTTSSCCCCEE-EECCBCSSSCBEEEEEEEEECTTTCCEEEEEEEE
T ss_pred EEECCCCCEEEEEcccCCCCCCCCcceEEEEEeCCCCCCCCCCEE-EecCccCCCCCccccceEEEECCCCeEEEEEEee
Confidence 4444 66667777655 224557778899986 89997543 33322 112245666777765 378999999753
Q ss_pred cC-------------C-CcceEEEEEEcCCCCCccceeecCCCCceEec---CCCCCCCCccCCe-EEEec---CCCeEE
Q 008686 138 DA-------------G-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP---ADQIDPGSFRDPT-TAWIG---PDKIWR 196 (557)
Q Consensus 138 ~~-------------~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~---p~~~~~~~fRDP~-V~~~~---~~g~~~ 196 (557)
.. + ......+..|+|+| ++|++.. .+.. .+++ ...+..|- .+-.. ..|+++
T Consensus 105 ~~~~~~~~~~g~~~~~~~~~~~~~~~S~D~G----~TWs~~~---~~~~~~~~~~~-~~~~~~~g~gi~~~~~~~~G~l~ 176 (601)
T 1w8o_A 105 QRQGFAGSRPGTDPADPNVLHANVATSTDGG----LTWSHRT---ITADITPDPGW-RSRFAASGEGIQLRYGPHAGRLI 176 (601)
T ss_dssp SSCCTTTCCSCCCTTCTTSCEEEEEEESSTT----SSCEEEE---CGGGSCCSTTC-CEEEECSEECEECCSSTTTTCEE
T ss_pred cCCCccccccCCCccCCceEEEEEEEecCCC----CCCCCcc---cccccccCCCe-eEEEecCCeEEEccCCCcCceEE
Confidence 21 0 11235778899875 7999742 1211 1121 11233442 12111 136666
Q ss_pred EEEeeecCC-ccEEEEEEeCC-CCCCEEcccccccCCCCCceeecceEEec
Q 008686 197 VIIGSKIND-TGLAILYRSKD-FVNWTKAEQSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 197 m~~ga~~~~-~G~i~ly~S~D-l~~W~~~~~~~~~~~~~~~~ECPdlf~l~ 245 (557)
+.+...... .....++.|+| ..+|+.... +.. ...| |.++++.
T Consensus 177 ~~~~~~~g~~~~~~~~~~S~D~G~TW~~~~~-~~~----~~~~-~~v~~~~ 221 (601)
T 1w8o_A 177 QQYTIINAAGAFQAVSVYSDDHGRTWRAGEA-VGV----GMDE-NKTVELS 221 (601)
T ss_dssp EEEEEECTTSCEEEEEEEESSTTSSCEECCC-BCS----SCCS-EEEEECT
T ss_pred EEEEEcCCCCceeEEEEEECCCCcCccCCCC-CCC----CCCc-CEEEEeC
Confidence 543322111 12456667776 799997542 221 2233 3667765
|
| >4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A | Back alignment and structure |
|---|
Probab=92.56 E-value=4.2 Score=37.43 Aligned_cols=102 Identities=7% Similarity=0.020 Sum_probs=56.9
Q ss_pred ceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCCCCCCcceeEEeecCCCCeEEEEEEEeCCeEEEEec
Q 008686 430 PFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGG 509 (557)
Q Consensus 430 ~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~~~~~~~~~~~~~~~~~~~~~LrIfvD~S~vEVFvN 509 (557)
..||.+|.++|......+.++. .. ..+.+.... .+ ..........++. .++..+|||.++.+.|++|+|
T Consensus 82 ~~Gi~fR~~~d~~~gY~~~i~~--~~-~~~~l~k~~---~g----~~~~L~~~~~~~~-~g~w~~l~I~~~G~~i~~~vn 150 (185)
T 4b1m_A 82 AGALMFRSDKDAKNGYLANVDA--KH-DLVKFFKFE---NG----AASVIAEYKTPID-VNKKYHLKTEAEGDRFKIYLD 150 (185)
T ss_dssp EEEEEEEECTTSSSEEEEEEET--TT-TEEEEEEEE---TT----EEEEEEEEECCCC-SSCCEEEEEEEETTEEEEEET
T ss_pred eEEEEEEEcCCCCCcEEEEEEC--CC-CEEEEEEEe---CC----cEEEeeeccccCC-CCCeEEEEEEEECCEEEEEEC
Confidence 4788888867766665555542 11 223222211 00 0000000111222 367889999999999999997
Q ss_pred CCceEEEEEeecCCCcCCceEEEEEecCceeEEEEEEEe
Q 008686 510 GGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRA 548 (557)
Q Consensus 510 dG~~~lTsRiyp~~~~~~~~~i~~~~~g~~~~~~~~l~~ 548 (557)
|+.+++.+-..-.. -.++|.+.. ..+.+.+++|
T Consensus 151 -G~~v~~~~D~~~~~--G~iGl~~~~---~~v~F~ni~V 183 (185)
T 4b1m_A 151 -DRLVIDAHDSVFSE--GQFGLNVWD---ATAVFQNVTK 183 (185)
T ss_dssp -TEEEEEEECCSCCC--EEEEEEEEE---EEEEEEEEEE
T ss_pred -CEEEEEEECCCCCC--CcEEEEEcC---CeEEEEEEEE
Confidence 68888877543221 235666542 2466777665
|
| >4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=89.63 E-value=0.055 Score=49.50 Aligned_cols=105 Identities=8% Similarity=-0.015 Sum_probs=60.6
Q ss_pred ceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCCCCCCcceeEEeecCCCCeEEEEEEEeCCeEEEEec
Q 008686 430 PFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGG 509 (557)
Q Consensus 430 ~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~~~~~~~~~~~~~~~~~~~~~LrIfvD~S~vEVFvN 509 (557)
.+||.++.++|....+.+.++... ..+. +.+...+.. ........++. .++..+|||.++.+.|++|+|
T Consensus 61 ~~Gi~fR~~~d~~~~Y~~~i~~~~---~~~~---l~~~~~G~~----~~l~~~~~~~~-~g~w~~l~I~~~G~~i~~~vn 129 (172)
T 4azz_A 61 AGALMFRSDKDAKNGYLANVDAKH---DLVK---FFKFENGAA----SVIAEYKTPID-VNKKYHLKTEAEGDRFKIYLD 129 (172)
Confidence 578888876665556555555321 1121 222222110 00011112222 467889999999999999997
Q ss_pred CCceEEEEEeecCCCcCCceEEEEEecCceeEEEEEEEeecc
Q 008686 510 GGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSM 551 (557)
Q Consensus 510 dG~~~lTsRiyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~m 551 (557)
|+.+++.+.+.-.. -.++|.+. ++ .+.+.++++=+|
T Consensus 130 -G~~v~~~~D~~~~~--G~iGl~~~-~g--~~~f~ni~v~~~ 165 (172)
T 4azz_A 130 -DRLVIDAHDSVFSE--GQFGLNVW-DA--TAVFQNVTKESL 165 (172)
Confidence 68999998876432 34666543 22 355666665444
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=89.94 E-value=4.2 Score=43.95 Aligned_cols=161 Identities=17% Similarity=0.103 Sum_probs=87.9
Q ss_pred CCEEEEEEEEe-----cC-CCeEEEEEEeCCC-CcceecCCCCCCCC----CcCCCceEeeeEEEcc-CCeEEEEEeeec
Q 008686 71 KGIYHFFYQYK-----LW-DTVVWGHSTSTDM-VNWTPHDAAIYPSQ----PFDANSCWSGSVTILP-GGNPAVLYTGID 138 (557)
Q Consensus 71 ~G~YHlfyq~~-----~~-g~~~Wgha~S~Dl-vhW~~~~~aL~P~~----~~d~~gv~SGsav~~~-dg~~~l~YTg~~ 138 (557)
+|....||-.. .+ +.......+|+|. .+|.....+...+. +-..+++..++.++++ +|++++||+...
T Consensus 191 ~G~Lla~~~~r~~~~~D~~~~i~i~~~rS~DgG~tWs~~~~v~~~~~~~~~~~~~~~~~nP~lvvD~~tG~I~L~~~~~~ 270 (523)
T 4fj6_A 191 NGTLLGVYDIRYNSSVDLQEKIDIGVSRSTDKGQTWEPMRVAMTFKQTDGLPHGQNGVGDPSILVDEKTNTIWVVAAWTH 270 (523)
T ss_dssp TSCEEEEEEEESSCSCCSSSSEEEEEEEESSTTSSCCCCEEEECCTTGGGCCGGGSCEEEEEEEECTTTCCEEEEEEECC
T ss_pred CCcEEEEEeceeccCCCCcCcEEEEEEEeCCCCCEeCCcEEeecccccccCccccccccCceEEEECCCCeEEEEEEecc
Confidence 78777777654 11 3556778899985 79986433332221 1123578899998864 799999987421
Q ss_pred C----------------CCcceEEEEEEcCCCCCccceeecCCCCceEec--CCCCCCCCccCCe-EEEecCCCeEEEEE
Q 008686 139 A----------------GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVP--ADQIDPGSFRDPT-TAWIGPDKIWRVII 199 (557)
Q Consensus 139 ~----------------~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~--p~~~~~~~fRDP~-V~~~~~~g~~~m~~ 199 (557)
. ......++..|+|+| ++|.+.. .+... .+.+ ..-+.-|- .+-. ++|++++-+
T Consensus 271 g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G----~TWs~p~--~l~~~~~~~~~-~~~~~g~G~GI~l-~dGrLv~P~ 342 (523)
T 4fj6_A 271 GMGNERAWWNSMPGMTPDETAQLMLVKSEDDG----KTWSEPI--NITSQVKDPSW-YFLLQGPGRGITM-QDGTLVFPI 342 (523)
T ss_dssp SCTTSCGGGTCCSSSSTTTSCEEEEEEESSTT----SSCCCCE--ECHHHHCCTTC-SEEEECSEECEEC-TTSCEEEEE
T ss_pred cccccccccccccCCCCCcceEEEEEEcCCCC----ccCCCCe--eecccccCCcc-eEEecCCCcceEE-eCCeEEEEE
Confidence 0 011345678899876 8998631 12111 1111 00111221 1212 577776544
Q ss_pred eeec-CCccEEEEEEeC-CCCCCEEcccccccCCCCCceeecceEEec
Q 008686 200 GSKI-NDTGLAILYRSK-DFVNWTKAEQSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 200 ga~~-~~~G~i~ly~S~-Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~ 245 (557)
-... ++.....++.|+ +...|+... .... . .--|.++++.
T Consensus 343 ~~~~~~g~~~s~i~~S~D~G~TW~~~~-~~~~----~-~~e~~vve~~ 384 (523)
T 4fj6_A 343 QFIDATRVPNAGIMYSKDRGKTWHLHN-LART----N-TTEAQVAEVE 384 (523)
T ss_dssp EEECTTSCEEEEEEEESSTTSSCEECC-CSEE----T-EEEEEEEEEE
T ss_pred EEEcCCCCEEEEEEEECCCCCeEEECC-CCCc----c-ccCCEEEEec
Confidence 3332 222233444555 479999754 2221 1 3446788886
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=89.37 E-value=2.8 Score=44.24 Aligned_cols=125 Identities=14% Similarity=0.188 Sum_probs=68.4
Q ss_pred EEEEEEeCC-CCcceecCCCCCCC--CCcCCC-ceEeeeEEEccC----CeEEE-EEeeecCCCcceEEEEEEcCCCCCc
Q 008686 87 VWGHSTSTD-MVNWTPHDAAIYPS--QPFDAN-SCWSGSVTILPG----GNPAV-LYTGIDAGNKQVQNLAVPKNLSDPY 157 (557)
Q Consensus 87 ~Wgha~S~D-lvhW~~~~~aL~P~--~~~d~~-gv~SGsav~~~d----g~~~l-~YTg~~~~~~~~q~lA~s~d~~d~~ 157 (557)
+....+|+| ..+|.... .|.+. ..|... +.-.|+.+...+ |++++ .|.... .+.....+.+|+|++
T Consensus 188 ~~~~~~S~D~G~TWs~p~-~l~~~~~~~~~~~~~~~~g~Gi~l~~g~~~Grlv~p~~~~~~-~g~~~~~v~~S~D~G--- 262 (449)
T 2bf6_A 188 YINLVYSDDDGKTWSEPQ-NINFQVKKDWMKFLGIAPGRGIQIKNGEHKGRIVVPVYYTNE-KGKQSSAVIYSDDSG--- 262 (449)
T ss_dssp EEEEEEESSTTSSCCCCE-ECHHHHCCTTCSCEEECSEECEECCSSTTTTCEEEEEEEECT-TCCEEEEEEEESSTT---
T ss_pred EEEEEEEcCCCccCCCCc-cCccccccccceeecccCCeEEEeccCCcCCEEEEEEEEEcC-CCCEEEEEEEECCCC---
Confidence 345677887 59998632 22211 122111 222345455444 67766 343222 233455778899875
Q ss_pred cceeecCCCCceEec---CCC-------C--CCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCC-CCCCEEc
Q 008686 158 LKEWIKPPENPLMVP---ADQ-------I--DPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKD-FVNWTKA 223 (557)
Q Consensus 158 l~~w~k~~~~Pvi~~---p~~-------~--~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~D-l~~W~~~ 223 (557)
.+|+... ++... +.+ . ...+..+|.++-. ++|+.+|+.... .|.+.+|+|.| ...|+..
T Consensus 263 -~tW~~~~--~~~~~~~~~~G~~~~~~~~~~g~~~~~e~~vve~-~dG~l~~~~R~~---~g~~~v~~S~D~G~TWs~~ 334 (449)
T 2bf6_A 263 -KNWTIGE--SPNDNRKLENGKIINSKTLSDDAPQLTECQVVEM-PNGQLKLFMRNL---SGYLNIATSFDGGATWDET 334 (449)
T ss_dssp -SSCEECC--CTTTTEECTTSCEECTTTCCCSTTCEEEEEEEEC-TTSCEEEEEEES---SSEEEEEEESSTTSCCCSC
T ss_pred -CceeECC--ccCcccccccccccccccccccCCCCCCCEEEEe-cCCEEEEEEEeC---CCCEEEEEECCCCccccCc
Confidence 7999743 21110 000 0 0124567776533 578888876443 46788999977 5899853
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=89.08 E-value=2.2 Score=46.45 Aligned_cols=101 Identities=14% Similarity=0.115 Sum_probs=63.5
Q ss_pred EeeeEEEccCCeEEEEEeeecCC----CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCC
Q 008686 118 WSGSVTILPGGNPAVLYTGIDAG----NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDK 193 (557)
Q Consensus 118 ~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g 193 (557)
-.++.+..++|.++++|.+.... +...+.+..|.|++ ++|++. ..+...+.......+.||.++...++|
T Consensus 22 ~~P~L~~~~~G~lla~~~~~~~~~~~~~~~~i~~~rS~DgG----~TW~~~--~~l~~~~~~~~~~~~~~P~~~~d~~~g 95 (601)
T 1w8o_A 22 RIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ--QVVSAGQTTAPIKGFSDPSYLVDRETG 95 (601)
T ss_dssp EEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC--EEEECCBCSSSCBEEEEEEEEECTTTC
T ss_pred eEeeEEECCCCCEEEEEcccCCCCCCCCcceEEEEEeCCCC----CCCCCC--EEEecCccCCCCCccccceEEEECCCC
Confidence 45777766789999999987542 12246788899875 799863 222222111112357789855443578
Q ss_pred eEEEEEeeecC---------------CccEEEEEEeCC-CCCCEEcc
Q 008686 194 IWRVIIGSKIN---------------DTGLAILYRSKD-FVNWTKAE 224 (557)
Q Consensus 194 ~~~m~~ga~~~---------------~~G~i~ly~S~D-l~~W~~~~ 224 (557)
+.+|+++.... ....+.+++|+| .+.|+...
T Consensus 96 ~i~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~S~D~G~TWs~~~ 142 (601)
T 1w8o_A 96 TIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRT 142 (601)
T ss_dssp CEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEE
T ss_pred eEEEEEEeecCCCccccccCCCccCCceEEEEEEEecCCCCCCCCcc
Confidence 88888765310 113577888876 68998753
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=88.65 E-value=1.8 Score=44.77 Aligned_cols=133 Identities=12% Similarity=0.148 Sum_probs=76.8
Q ss_pred ccCCcceEEE-CCEEEEEEEEec-----------------------C-CCeEEEEEEeCC-CCcceecCCCCCC---CCC
Q 008686 61 MNDPNGPMIY-KGIYHFFYQYKL-----------------------W-DTVVWGHSTSTD-MVNWTPHDAAIYP---SQP 111 (557)
Q Consensus 61 ~nDPnG~~~~-~G~YHlfyq~~~-----------------------~-g~~~Wgha~S~D-lvhW~~~~~aL~P---~~~ 111 (557)
..+|. ++.. +|+.+|||.+.. | ........+|+| ..+|... ..|.+ ...
T Consensus 102 ~~~Pt-~v~~~~g~I~l~~~~~~g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G~TWs~p-~~l~~~~~~~~ 179 (386)
T 2xzi_A 102 WGNPT-PVVDDDNTIYLFLSWNGATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDGNTWSKP-VDLTKELTPDG 179 (386)
T ss_dssp EEEEE-EEECTTSCEEEEEEEECTTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTTSCCCCC-EECHHHHSCTT
T ss_pred ccccE-EEEeCCCCEEEEEEeccccccccCcceeccCceecccccccccccEEEEEEECCCCccCCCc-ccCcccccccc
Confidence 44674 4555 789999996531 0 123456777887 6999853 12211 112
Q ss_pred cCCCceEeeeEEEccCCeEEEEEeeecCCCcceEEEEEEcC--CCCCccceeecCCCCceEecCCCCCCCCccCCeEEEe
Q 008686 112 FDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKN--LSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWI 189 (557)
Q Consensus 112 ~d~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d--~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~ 189 (557)
|.....-.|+.|...+|++++-.. ..+.+|+| ++ .+|+... ++ +. -.+|.++-.
T Consensus 180 ~~~~~~~~g~gI~l~dGrLv~p~~---------~~~~~S~D~~~G----~tW~~~~--~~---~~------~~e~~vve~ 235 (386)
T 2xzi_A 180 WAWDAVGPGNGIRLTTGELVIPAM---------GRNIIGRGAPGN----RTWSVQR--LS---GA------GAEGTIVQT 235 (386)
T ss_dssp CCSCCBCSSCCEECTTSCEEEEET---------TEEEEEESSTTS----CEEEEEE--CT---TC------CSSEEEEEC
T ss_pred ceeeccCCccEEEecCCEEEEEeE---------EEEEEccCCCCC----CcccccC--cC---CC------CCcCEEEEe
Confidence 222111224445566888775432 24567888 65 7998632 21 11 147775533
Q ss_pred cCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEc
Q 008686 190 GPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKA 223 (557)
Q Consensus 190 ~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~ 223 (557)
++|+.+|+.... ..+...+|+|.| .+|+..
T Consensus 236 -~dG~L~~~~r~~--~g~~r~v~~S~D-~tWt~~ 265 (386)
T 2xzi_A 236 -PDGKLYRNDRPS--QKGYRMVARGTL-EGFGAF 265 (386)
T ss_dssp -TTSCEEEEECCS--SSEEEEEEEEET-TEECCC
T ss_pred -CCCcEEEEEeCC--CCccEEEEEEeC-CccCcc
Confidence 578887775432 222568999999 999854
|
| >3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A* | Back alignment and structure |
|---|
Probab=87.53 E-value=4.9 Score=41.54 Aligned_cols=142 Identities=16% Similarity=0.097 Sum_probs=79.3
Q ss_pred ccCCcceEEE-CC--EEEEEEEEec-----C---------CCeEEEEEEeCC-CCcceecCCCCCCC-----CCcCCCce
Q 008686 61 MNDPNGPMIY-KG--IYHFFYQYKL-----W---------DTVVWGHSTSTD-MVNWTPHDAAIYPS-----QPFDANSC 117 (557)
Q Consensus 61 ~nDPnG~~~~-~G--~YHlfyq~~~-----~---------g~~~Wgha~S~D-lvhW~~~~~aL~P~-----~~~d~~gv 117 (557)
..||.-++-. .| +.+||+.... | .....-+.+|+| .++|.+.. .+.+. ..|-..-.
T Consensus 95 v~~Pt~vv~~~tG~~~I~llvg~~~~~~~~~~~~~~~~~~~~~~l~lv~S~D~G~tWs~~~-~~~~~~~~~~~~~~~~~~ 173 (379)
T 3sil_A 95 VMDPTCIVANIQGRETILVMVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKVE-TNIHDIVTKNGTISAMLG 173 (379)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEESSCCSCGGGCCSSSSCTTCEEEEEEESSTTSCCEEEC-CSHHHHHHHHCSEEEEEE
T ss_pred EecCceEEeCCCCCeeEEEEEEeecCCCcceeeccccCCCCceeEEEEEccCCCCcCCCCc-ccccccccccceeeeecC
Confidence 5688654443 47 8788764331 1 122345677777 59998843 11111 11111001
Q ss_pred EeeeEEEccCCeEEEE-EeeecC--CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCe
Q 008686 118 WSGSVTILPGGNPAVL-YTGIDA--GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKI 194 (557)
Q Consensus 118 ~SGsav~~~dg~~~l~-YTg~~~--~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~ 194 (557)
=.|+.++..+|++++= |..... .+...-.+.+|+| + .+|+... ++-. ....+|.|+-. +|+
T Consensus 174 g~G~GI~l~~G~Lv~P~~~~~~~~~~~~~~s~~iyS~D-G----~tW~~~~--~~~~-------~~~~ep~vvE~--dG~ 237 (379)
T 3sil_A 174 GVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTD-G----ITWSLPS--GYCE-------GFGSENNIIEF--NAS 237 (379)
T ss_dssp CSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESS-S----SSEECCS--CCEE-------CTTCCEEEEEE--TTE
T ss_pred CCCceEEEcCCcEEEEEEEeeccCCCCCEEEEEEEcCC-C----CCeEECC--CCCC-------ccCCCCEEEEE--CCE
Confidence 2355677778987653 222211 1233445668888 5 7998742 2211 24679997633 688
Q ss_pred EEEEEeeecCCccEEEEEEeCC-CCCCEEc
Q 008686 195 WRVIIGSKINDTGLAILYRSKD-FVNWTKA 223 (557)
Q Consensus 195 ~~m~~ga~~~~~G~i~ly~S~D-l~~W~~~ 223 (557)
.+|.... .|...+|.|.| +..|+..
T Consensus 238 L~m~~R~----~g~r~v~~S~D~G~tWt~~ 263 (379)
T 3sil_A 238 LVNNIRN----SGLRRSFETKDFGKTWTEF 263 (379)
T ss_dssp EEEEECC----SSBCBCEEESSSSSCCEEC
T ss_pred EEEEEEe----CCCEEEEEEcCCCccCCCC
Confidence 8777654 34446788866 5899975
|
| >1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A* | Back alignment and structure |
|---|
Probab=86.51 E-value=2.8 Score=47.52 Aligned_cols=153 Identities=15% Similarity=0.095 Sum_probs=83.8
Q ss_pred CCcceEEECCEEEE-EEEEe--cCCCeEEEEEE-eCCCCccee-cCCCCCCCCCcCCCceEeeeEEEcc--CCeEEEEEe
Q 008686 63 DPNGPMIYKGIYHF-FYQYK--LWDTVVWGHST-STDMVNWTP-HDAAIYPSQPFDANSCWSGSVTILP--GGNPAVLYT 135 (557)
Q Consensus 63 DPnG~~~~~G~YHl-fyq~~--~~g~~~Wgha~-S~DlvhW~~-~~~aL~P~~~~d~~gv~SGsav~~~--dg~~~l~YT 135 (557)
.|.--+|.||+.++ -.... .-....||-.. |+|+.++-. ...-..+...++ .+---++++..+ +|.+++|+.
T Consensus 165 ~~~~~f~~dG~l~~~~~~~~~~~~~~~~~G~~~~s~dG~~~~~~v~~~~~~~~~f~-~~yRIPaL~~~~~~~GtLLA~ad 243 (781)
T 1w0p_A 165 NPSASFYFDGKLIRDNIQPTASKQNMIVWGNGSSNTDGVAAYRDIKFEIQGDVIFR-GPDRIPSIVASSVTPGVVTAFAE 243 (781)
T ss_dssp SCEEEEEETTEEEEEEECCEECCCCEEEEEECCSSSCEEEEEEEEEEEECCEEEEC-TTCEEEEEEECSSSTTCEEEEEE
T ss_pred CceeEEecCCcEEEEeccCCCCcccEEEeccccccCCCcccceeEEEecCCCcccC-CCCcCcEEEEccCCCCeEEEEEc
Confidence 44455677887776 22211 11234566666 677776532 211122222221 111234555555 699999998
Q ss_pred eecCCC-------cceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC----
Q 008686 136 GIDAGN-------KQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN---- 204 (557)
Q Consensus 136 g~~~~~-------~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~---- 204 (557)
+..... .-.+.+..|+|+| ++|... ..|...+..-....++||.++...++|++++++.....
T Consensus 244 ~R~~~~D~g~~~~~~~Iv~rRS~DgG----~TWs~~--~~v~~~~~~~~~~~~~dP~~v~D~~tG~I~lf~~~~~~~~~~ 317 (781)
T 1w0p_A 244 KRVGGGDPGALSNTNDIITRTSRDGG----ITWDTE--LNLTEQINVSDEFDFSDPRPIYDPSSNTVLVSYARWPTDAAQ 317 (781)
T ss_dssp EEETCSSTTCTTCEEEEEEEEESSSS----SSCCCC--EESSGGGCTTSCEEEEEEEEEEETTTTEEEEEEEEEETTCCS
T ss_pred ccccCCCcccccCCceEEEEEcCCCC----cccCCc--EEEecCCCCCCCCeeeCCEEEEECCCCEEEEEEEeccCCccc
Confidence 764211 1135677899876 799862 22223211111357899997776557888887753211
Q ss_pred --------CccEEEEEEeC-CCCCCEE
Q 008686 205 --------DTGLAILYRSK-DFVNWTK 222 (557)
Q Consensus 205 --------~~G~i~ly~S~-Dl~~W~~ 222 (557)
....+++.+|+ +...|..
T Consensus 318 eg~~~~~~~~~~v~~~~S~D~G~TWS~ 344 (781)
T 1w0p_A 318 NGDRIKPWMPNGIFYSVYDVASGNWQA 344 (781)
T ss_dssp GGGCCCTTSCCEEEEEEEETTTTEECC
T ss_pred cccccccCCCceEEEEEecCCCCcccC
Confidence 01356677775 5788975
|
| >1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A* | Back alignment and structure |
|---|
Probab=84.20 E-value=5 Score=40.96 Aligned_cols=100 Identities=8% Similarity=0.061 Sum_probs=60.1
Q ss_pred ceEe-eeEE-EccCCeEEEEEeeecCC---CcceEEEEEEcCCCCCccc----eeecCCCCceEecCCCCCCCCccCCeE
Q 008686 116 SCWS-GSVT-ILPGGNPAVLYTGIDAG---NKQVQNLAVPKNLSDPYLK----EWIKPPENPLMVPADQIDPGSFRDPTT 186 (557)
Q Consensus 116 gv~S-Gsav-~~~dg~~~l~YTg~~~~---~~~~q~lA~s~d~~d~~l~----~w~k~~~~Pvi~~p~~~~~~~fRDP~V 186 (557)
.+|. ++.+ ..++|.+++++.+.... ....+.+..|+|++ + +|++. .++.... .....+.+|.+
T Consensus 20 ~s~riP~Lv~~~~~G~l~a~~e~~~~~~~~~~~~i~~~rS~D~G----~~~~~tW~~~---~~~~~~~-~~~~~~~~P~~ 91 (382)
T 1so7_A 20 HAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDA----PTHQVQWQAQ---EVVAQAR-LDGHRSMNPCP 91 (382)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEECC-------CEEEEEEEEEEG----GGTEEEECCC---EECTTSC-CTTEEEEEEEE
T ss_pred eEEEeCeEEEECCCCeEEEEEccCcCCCCCCCCEEEEEEeeeCC----ccccceeCCc---EEeccCC-CCCCccccceE
Confidence 3554 6666 55689999999876431 11125667788865 7 99862 2222211 11234789986
Q ss_pred EEecCCCeEEEEEeeecC------------CccEEEEEEeCC-CCCCEEc
Q 008686 187 AWIGPDKIWRVIIGSKIN------------DTGLAILYRSKD-FVNWTKA 223 (557)
Q Consensus 187 ~~~~~~g~~~m~~ga~~~------------~~G~i~ly~S~D-l~~W~~~ 223 (557)
+...++|+-+|+++.... ....+.+++|+| .+.|+..
T Consensus 92 v~d~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~DgG~TW~~~ 141 (382)
T 1so7_A 92 LYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSP 141 (382)
T ss_dssp EECTTTCCEEEEEEEEESSCCHHHHHCTTCCCCEEEEEEESSTTSSCCCC
T ss_pred EEECCCCcEEEEEEEecCCCccceeecCCCCccEEEEEEEcCCCCcCCCC
Confidence 665446888888765421 123578888876 6899854
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=83.71 E-value=11 Score=38.63 Aligned_cols=154 Identities=10% Similarity=0.044 Sum_probs=84.0
Q ss_pred ceEEE-CCEEEEEEEEe-----cCCCeEEEEEEeC---CC----CcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEE
Q 008686 66 GPMIY-KGIYHFFYQYK-----LWDTVVWGHSTST---DM----VNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 66 G~~~~-~G~YHlfyq~~-----~~g~~~Wgha~S~---Dl----vhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l 132 (557)
+|+.. +|..-.||... .++...+...+|+ |. .+|... ..|.... ...+..++.+++.+|+++|
T Consensus 42 sLv~~~~G~l~A~~e~~~~~~~d~g~~~i~~~rS~~~~D~G~~~~tW~~~-~~l~~~~---~~~~~~Pt~v~~~~g~I~l 117 (386)
T 2xzi_A 42 AVVRTTTGRILAFAEGRRHTNQDFGDINLVYKRTKTTANNGASPSDWEPL-REVVGSG---AGTWGNPTPVVDDDNTIYL 117 (386)
T ss_dssp EEEECTTSCEEEEEEEESSSSCSSSSEEEEEEEBSSSSSTTCSGGGBCCC-EEEECCS---SSEEEEEEEEECTTSCEEE
T ss_pred EEEEeCCCcEEEEEEeeeCCCCCCCceeEEEEEeeeecCCCcCceeccCc-EEEeeCC---CCcccccEEEEeCCCCEEE
Confidence 45555 67766777544 2466778888998 86 799853 3343332 2345666777654789999
Q ss_pred EEeeec------CC-----------------CcceEEEEEEcCCCCCccceeecCCCCceEe--cCCCCCCCCccCC-eE
Q 008686 133 LYTGID------AG-----------------NKQVQNLAVPKNLSDPYLKEWIKPPENPLMV--PADQIDPGSFRDP-TT 186 (557)
Q Consensus 133 ~YTg~~------~~-----------------~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~--~p~~~~~~~fRDP-~V 186 (557)
+|+... .. ......+..|.|++ ++|.+. ..+.. .++.+ ...+..| ..
T Consensus 118 ~~~~~~g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G----~TWs~p--~~l~~~~~~~~~-~~~~~~~g~g 190 (386)
T 2xzi_A 118 FLSWNGATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDG----NTWSKP--VDLTKELTPDGW-AWDAVGPGNG 190 (386)
T ss_dssp EEEEECTTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTT----SCCCCC--EECHHHHSCTTC-CSCCBCSSCC
T ss_pred EEEeccccccccCcceeccCceecccccccccccEEEEEEECCCC----ccCCCc--ccCccccccccc-eeeccCCccE
Confidence 996321 00 11245678888865 899862 12221 11122 1123344 21
Q ss_pred EEecCCCeEEEEEeeecCCccEEEEEEeC--CCCCCEEcccccccCCCCCceeecceEEec
Q 008686 187 AWIGPDKIWRVIIGSKINDTGLAILYRSK--DFVNWTKAEQSLYSTNQSGMWECPDFFPVS 245 (557)
Q Consensus 187 ~~~~~~g~~~m~~ga~~~~~G~i~ly~S~--Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~ 245 (557)
+-. ++|++++-+- ...+|+.+ ...+|+... .... .-| |.++++.
T Consensus 191 I~l-~dGrLv~p~~-------~~~~~S~D~~~G~tW~~~~-~~~~-----~~e-~~vve~~ 236 (386)
T 2xzi_A 191 IRL-TTGELVIPAM-------GRNIIGRGAPGNRTWSVQR-LSGA-----GAE-GTIVQTP 236 (386)
T ss_dssp EEC-TTSCEEEEET-------TEEEEEESSTTSCEEEEEE-CTTC-----CSS-EEEEECT
T ss_pred EEe-cCCEEEEEeE-------EEEEEccCCCCCCcccccC-cCCC-----CCc-CEEEEeC
Confidence 223 4776665432 12344334 479999643 3321 123 3677775
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=81.81 E-value=7.8 Score=40.69 Aligned_cols=76 Identities=12% Similarity=0.039 Sum_probs=47.1
Q ss_pred ceE-eeeEEEccCCeEEEEEeeecCC--C---c-ceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEE
Q 008686 116 SCW-SGSVTILPGGNPAVLYTGIDAG--N---K-QVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAW 188 (557)
Q Consensus 116 gv~-SGsav~~~dg~~~l~YTg~~~~--~---~-~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~ 188 (557)
.+| .++++..++|.++++|.+.... . . ..+.+..|+|++ .+|++. ..|...+ + ...+-||.++-
T Consensus 21 ~~~riP~l~~~~~G~lla~~~~r~~~~~d~~~~~~~i~~~rS~DgG----~TWs~~--~~v~~~~-~--~~~~~dp~l~~ 91 (449)
T 2bf6_A 21 SNYRIPALFKTKEGTLIASIDARRHGGADAPNNDIDTAVRRSEDGG----KTWDEG--QIIMDYP-D--KSSVIDTTLIQ 91 (449)
T ss_dssp SEEEEEEEEECTTSCEEEEEEEETTSSCCTTSSCEEEEEEEESSTT----SSCCCC--EEEECCS-T--TCEEEEEEEEE
T ss_pred ceEEcceEEECCCCCEEEEEeCccCccccCCCCcceEEEEEcCCCC----CCCCCC--EEeecCC-C--ccccccceeEE
Confidence 466 4777666799999999876431 1 1 247788999986 799862 2333332 2 24677887433
Q ss_pred ecCCCeEEEEEe
Q 008686 189 IGPDKIWRVIIG 200 (557)
Q Consensus 189 ~~~~g~~~m~~g 200 (557)
..+.|+-+|++.
T Consensus 92 d~~~G~i~l~~~ 103 (449)
T 2bf6_A 92 DDETGRIFLLVT 103 (449)
T ss_dssp CTTTCCEEEEEE
T ss_pred ECCCCeEEEEEe
Confidence 323566666654
|
| >2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A* | Back alignment and structure |
|---|
Probab=80.05 E-value=4 Score=43.32 Aligned_cols=128 Identities=19% Similarity=0.211 Sum_probs=70.3
Q ss_pred CeEEEEEEeCC-CCcceecCCCCCCC--CCcCCC-ceEeeeEEEccC----CeEEE-EEeeecC---CCcceEEEEEEcC
Q 008686 85 TVVWGHSTSTD-MVNWTPHDAAIYPS--QPFDAN-SCWSGSVTILPG----GNPAV-LYTGIDA---GNKQVQNLAVPKN 152 (557)
Q Consensus 85 ~~~Wgha~S~D-lvhW~~~~~aL~P~--~~~d~~-gv~SGsav~~~d----g~~~l-~YTg~~~---~~~~~q~lA~s~d 152 (557)
..+.-..+|+| ..+|... ..|.+. ..|... +.-.|+.+...+ |++++ +|+.... .+.....+.+|.|
T Consensus 213 t~~~~~~~S~D~G~TWs~p-~~l~~~~~~~~~~f~~~gpg~gI~l~d~~~~GrLv~p~~~~~~~~~~~g~~~~~v~~SdD 291 (471)
T 2w20_A 213 DSYLWMSYSDDDGKTWSAP-QDITPMVKADWMKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDD 291 (471)
T ss_dssp SCEEEEEEESSTTSSCCCC-EECHHHHCCTTCSCEEECCEECEECCSSTTTTCEEEEEEECCTTTHHHHCCEEEEEEESS
T ss_pred CceEEEEEECCCcCcCCCC-cccCcccccccccccccCCcceEEecCCCcCCeEEEEEEEeccccCCCCcEEEEEEEECC
Confidence 45566788888 6999863 223221 222111 111234455545 78766 4543211 1224557788998
Q ss_pred CCCCccceeecCCCCceEec-C-CC-------CC--CCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCC-CCCC
Q 008686 153 LSDPYLKEWIKPPENPLMVP-A-DQ-------ID--PGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKD-FVNW 220 (557)
Q Consensus 153 ~~d~~l~~w~k~~~~Pvi~~-p-~~-------~~--~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~D-l~~W 220 (557)
.| .+|+... ++-.. + .+ .. .....+|.++ .-++|+.+|+... ..|.+.+|+|.| ...|
T Consensus 292 ~G----~TW~~~~--~v~~~~~~~g~~~~~~~~~~~~~~~~ep~vv-e~~dG~L~~~~R~---~~G~~~v~~S~DgG~TW 361 (471)
T 2w20_A 292 HG----KTWHAGE--AVNDNRQVDGQKIHSSTMNNRRAQNTESTVV-QLNNGDVKLFMRG---LTGDLQVATSKDGGVTW 361 (471)
T ss_dssp TT----SSCEECC--CTTTTEEETTEEECTTTCCCGGGCCCSEEEE-ECTTSCEEEEECC---SSSEEEEEEESSSSSSC
T ss_pred CC----CCcccCC--ccCcccccCccccccccccccCcCccCCEEE-EcCCCeEEEEEEe---CCCCEEEEEEcCCCcCC
Confidence 75 8999743 22111 0 01 00 0134688854 3367888877643 246788999977 5899
Q ss_pred EEc
Q 008686 221 TKA 223 (557)
Q Consensus 221 ~~~ 223 (557)
+..
T Consensus 362 s~~ 364 (471)
T 2w20_A 362 EKD 364 (471)
T ss_dssp CSC
T ss_pred CCc
Confidence 854
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 557 | ||||
| d1y4wa2 | 353 | b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awa | 3e-82 | |
| d1uypa2 | 294 | b.67.2.3 (A:1-294) Beta-fructosidase (invertase), | 1e-65 | |
| d1oyga_ | 440 | b.67.2.2 (A:) Levansucrase {Bacillus subtilis [Tax | 1e-26 | |
| d1y4wa1 | 164 | b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus a | 1e-23 | |
| d1uypa1 | 138 | b.29.1.19 (A:295-432) Beta-fructosidase (invertase | 8e-08 | |
| d1vkda_ | 327 | b.67.2.4 (A:) Hypothetical protein TM1225 {Thermot | 3e-05 | |
| d1yrza2 | 317 | b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-termina | 0.002 |
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Length = 353 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Score = 258 bits (661), Expect = 3e-82
Identities = 83/356 (23%), Positives = 135/356 (37%), Gaps = 41/356 (11%)
Query: 45 SQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQY----KLWDTVVWGHSTSTDMVNWT 100
QPYR YHF P +WMNDPNG + + G YH F+QY W + WGH+ S D+ +W
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWE 63
Query: 101 PHDAAIYPSQP--FDANSCWSGSVTILPGGNPAV----------LYTGI----------- 137
A+ +SGS +YT
Sbjct: 64 EKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQ 123
Query: 138 -DAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPAD---QIDPGSFRDPTTAWIGPDK 193
++Q Q++A D L NP++ + + +FRDP W +
Sbjct: 124 TVQEDQQSQSIAYSL---DDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQ 180
Query: 194 IWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVD 253
W V+ I + +Y S + +W + Q G+WECP + G
Sbjct: 181 KWVVVTS--IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPL--DSGNS 236
Query: 254 TSVIGPNIKHVLKVSLSNYQQDYYTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGS 312
T + + + + Y +G ++ TT T A+ +++ D+G FY +
Sbjct: 237 TKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPDFYAA 296
Query: 313 KTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSGRQ--LMQWP 366
+ + N + GW+N ++ W A PR++ L G + L+Q P
Sbjct: 297 AGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 294 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 213 bits (543), Expect = 1e-65
Identities = 82/327 (25%), Positives = 143/327 (43%), Gaps = 42/327 (12%)
Query: 48 YRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQY----KLWDTVVWGHSTSTDMVNWTPHD 103
++ YHF P + WMNDPNG + +KG YH FYQY W + WGH+ S D+V+W
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLP 61
Query: 104 AAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIK 163
A+Y + + +SGS G ++YT + +++K
Sbjct: 62 VALY--PDDETHGVFSGSAVE-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVK 118
Query: 164 PPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN-DTGLAILYRSKDFVNWTK 222
NP++ + +FRDP + WR+++GS + G +LY S D +W K
Sbjct: 119 YDGNPVISKPPEEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDDLFHW-K 175
Query: 223 AEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGTY 282
E +++ + ECPD + K +L S+++ +++G
Sbjct: 176 YEGAIFEDETTKEIECPDLVRI---------------GEKDILIYSITSTNSVLFSMGEL 220
Query: 283 NITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINE--SSTRSDNL 339
+EG + D+G FY ++TFF +R ++ GW+ +
Sbjct: 221 ---------KEGKLNVEKRGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRTGLYPTK 269
Query: 340 KKGWAGLQATPRNLWLDKSGRQLMQWP 366
++GW G+ + PR L+++ + +L P
Sbjct: 270 REGWNGVMSLPRELYVENN--ELKVKP 294
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} Length = 440 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Score = 110 bits (276), Expect = 1e-26
Identities = 47/385 (12%), Positives = 99/385 (25%), Gaps = 95/385 (24%)
Query: 59 SW-MNDPNG-PMIYKGIYHFFYQ---YKLWDT----VVWGHSTSTDMVNWTPHDAAIYPS 109
SW + + +G Y G + F K D + + T + +W S
Sbjct: 54 SWPLQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDS 113
Query: 110 QPFDANSC--------WSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNL--SDPYLK 159
FDAN WSGS T G + YT + Q L + +
Sbjct: 114 DKFDANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSL 173
Query: 160 EWIKPPENPLMVPADQI-----------------------DPGSFRDPTTAWIGPDKIWR 196
+ + D DP D ++ +
Sbjct: 174 NINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTG 233
Query: 197 VIIGSKINDT-----------------------------------GLAILYRSKDFVNWT 221
G + ++ L ++ + D+
Sbjct: 234 TEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKK 293
Query: 222 KAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDYYTIGT 281
+ + S + E + F ++ K + T K+++ + +
Sbjct: 294 VMKPLIASNTVTDEIERANVFKMNGKW--YLFTD------SRGSKMTIDGITSNDIYMLG 345
Query: 282 Y---NITTDTYIAEEGSFDDNSGLRYDYGKF-YGSKTFFDSAKNRRILWGWINESSTRSD 337
Y ++T + L + F Y + N ++ ++ +D
Sbjct: 346 YVSNSLTGPYKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYAD 405
Query: 338 NLKKGWA-----GLQATPRNLWLDK 357
+ +A ++ ++ D
Sbjct: 406 -KQSTFAPSFLLNIKGKKTSVVKDS 429
|
| >d1y4wa1 b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Length = 164 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Score = 95.4 bits (237), Expect = 1e-23
Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 16/177 (9%)
Query: 379 KWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCPFGLLVLAS 438
W + +R + T T ++ + F+ +D ++ F + + AS
Sbjct: 2 AWSSISNKRP-IYSRTFKTLSEGSTNTTTTGETFK----VDLSFSAKSKASTFAIALRAS 56
Query: 439 NGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDP-VHEKLSIRS 497
E T V + K Q + D++ S ++ + L P + +
Sbjct: 57 ANFTEQTLVGYDFAKQQ------IFLDRTHSGDVSFDETFASVYHGPLTPDSTGVVKLSI 110
Query: 498 LIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKA 554
+DRS VE FGG G+ +TA+I+P+ D H + G + +
Sbjct: 111 FVDRSSVEVFGGQGETTLTAQIFPS---SDAVHARLASTGGT-TEDVRADIYKIAST 163
|
| >d1uypa1 b.29.1.19 (A:295-432) Beta-fructosidase (invertase), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Beta-fructosidase (invertase), C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 49.2 bits (117), Expect = 8e-08
Identities = 28/190 (14%), Positives = 56/190 (29%), Gaps = 52/190 (27%)
Query: 367 ISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQ 426
+ E+ LR +V TA + + ++E
Sbjct: 1 VDELLALRKRKVFE----------------TAKSGTFLLDVKENSYE------------- 31
Query: 427 FLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDL 486
+C F + G + V + +++ D +RS ++ + S
Sbjct: 32 IVCEFSGEIELRMGNESEEVVITK----SRDELIV---DTTRSGVSGGEVRKST------ 78
Query: 487 DPVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSL 546
IR+ +D VE F + RI+P +N + K N L
Sbjct: 79 VEDEATNRIRAFLDSCSVEFFFNDSI-AFSFRIHPE---------NVYNILSVKSNQVKL 128
Query: 547 RAWSMKKAQI 556
+ ++ +
Sbjct: 129 EVFELENIWL 138
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} Length = 327 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Score = 43.9 bits (103), Expect = 3e-05
Identities = 24/180 (13%), Positives = 46/180 (25%), Gaps = 27/180 (15%)
Query: 66 GPMIYKGIYHFFYQYKLWDTV-VWGHSTSTDMVNWTPHDAAIY----PSQPFDANSCWSG 120
+ Y G + ++ +T S D +NW I +PF + +
Sbjct: 49 AVVPYNGEFVGVFRIDHKNTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDP 108
Query: 121 SVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGS 180
V + T + + + K+ P N V + G
Sbjct: 109 RVVKIEDTYYITFCTD---DHGPTIGVGMTKDFKTFVRLPNAYVPFNRNGVLFPRKINGK 165
Query: 181 F----RDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMW 236
+ R I+ L S D ++W L ++ +
Sbjct: 166 YVMLNRPSDNGHTPFGDIF---------------LSESPDMIHWGNHRFVLGRSSYNWWE 210
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Score = 38.4 bits (88), Expect = 0.002
Identities = 28/188 (14%), Positives = 58/188 (30%), Gaps = 12/188 (6%)
Query: 60 WMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWS 119
+ DP+ + Y+ W V H S D+ +W + + + D +
Sbjct: 10 FHPDPS-IVRVGDDYYIATSTFEWFPGVRIHH-SRDLKHWRFVSSPLTRTSQLDMKGNMN 67
Query: 120 GSVTILP-----GGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPAD 174
P G ++YT + + ++ + P +P+ + +
Sbjct: 68 SGGIWAPCLSYHDGTFYLIYTDVKQWHGAFKDAHNYLVTAQN----IEGPWSDPIYLNSS 123
Query: 175 QIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSG 234
DP F D + IW G G+ + S+ +++Y
Sbjct: 124 GFDPSLFHDDDGRKWLVNMIWDYRKG-NHPFAGIILQEYSEAEQKLVGPVKNIYKGTDIQ 182
Query: 235 MWECPDFF 242
+ E P +
Sbjct: 183 LTEGPHLY 190
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 557 | |||
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 100.0 | |
| d1y4wa2 | 353 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 100.0 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 99.92 | |
| d1y4wa1 | 164 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 99.88 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.75 | |
| d1uypa1 | 138 | Beta-fructosidase (invertase), C-terminal domain { | 99.72 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 99.66 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 99.53 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 99.48 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 99.37 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 99.37 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 99.29 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.2 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 98.21 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 98.01 | |
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 97.93 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 97.57 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 97.54 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 97.39 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 97.31 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 97.25 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 96.97 | |
| d1w8oa3 | 356 | Micromonospora sialidase, N-terminal domain {Micro | 92.56 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 90.73 | |
| d1y4wa2 | 353 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 81.74 | |
| d3sila_ | 379 | Salmonella sialidase {Salmonella typhimurium, stra | 81.28 |
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=4e-75 Score=593.14 Aligned_cols=281 Identities=30% Similarity=0.668 Sum_probs=247.6
Q ss_pred CCcccccccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeE
Q 008686 47 PYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSV 122 (557)
Q Consensus 47 ~~rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsa 122 (557)
.|||+|||+|+.||||||||++|++|+||||||++ .||+++||||+|+|||||+++|+||.|+. |.+|||||||
T Consensus 1 ~~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~al~p~~--d~~g~~sGsa 78 (294)
T d1uypa2 1 LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDD--ETHGVFSGSA 78 (294)
T ss_dssp CCSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSSCSCEEEEEEESSSSSCEEEEEEECCSS--TTEEEEEEEE
T ss_pred CCCccCcccCCCCCcCCCccceEECCEEEEEEecCCCCCCCCCcEEEEEEeCCcCCeEECCccccccc--CCCCeEEEEE
Confidence 38999999999999999999999999999999999 78999999999999999999999999986 6789999999
Q ss_pred EEccCCeEEEEEeeecC-----CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEE
Q 008686 123 TILPGGNPAVLYTGIDA-----GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRV 197 (557)
Q Consensus 123 v~~~dg~~~l~YTg~~~-----~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m 197 (557)
++. +|++++||||+.. ...+.|++|+|+|+ ++|+|++.|||+..++.....+||||+| |. ++|+|+|
T Consensus 79 v~~-~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg-----~~w~k~~~npvi~~~~~~~~~~fRDP~V-~~-~~g~w~M 150 (294)
T d1uypa2 79 VEK-DGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKPPEEGTHAFRDPKV-NR-SNGEWRM 150 (294)
T ss_dssp EEE-TTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSCSSTTEEEEEEEEE-EE-ETTEEEE
T ss_pred Eec-CCeEEEEEEEeeCCCCCCcceeeeEEEECCCC-----CceEeecCCceecCCCccCccccCCCcc-cc-cCCEEEE
Confidence 985 9999999999753 24577888998774 7999999999998766556789999996 55 4799999
Q ss_pred EEeeec-CCccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCCceeE
Q 008686 198 IIGSKI-NDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNYQQDY 276 (557)
Q Consensus 198 ~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~~~~~ 276 (557)
++|++. +..|+|++|+|+||++|++.+. +...+.+.||||||||+|+ + ||||++|........
T Consensus 151 ~~g~~~~~~~G~i~ly~S~Dl~~W~~~g~-l~~~~~~~~~ECPdlf~l~--~-------------~~vl~~s~~~~~~~~ 214 (294)
T d1uypa2 151 VLGSGKDEKIGRVLLYTSDDLFHWKYEGA-IFEDETTKEIECPDLVRIG--E-------------KDILIYSITSTNSVL 214 (294)
T ss_dssp EEEEEETTTEEEEEEEEESSSSSEEEEEE-EEEETTCSCEEEEEEEEET--T-------------EEEEEEEETTTTEEE
T ss_pred EEEeeecCCccEEEEEEcCCccceeEecc-ceeCCCCCceeeceEEEeC--C-------------eeEEEEEecCCCCee
Confidence 999987 5679999999999999999874 5555667899999999997 5 999999998888899
Q ss_pred EEEEEEecCCCeEeecCCccCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCC--CCCCCCCccccccccEEE
Q 008686 277 YTIGTYNITTDTYIAEEGSFDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTR--SDNLKKGWAGLQATPRNL 353 (557)
Q Consensus 277 Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~--~~~~~~gW~g~ltlPReL 353 (557)
|++|+++. ++|.++. .++||+|+ |||+|||.+ ++|||+||||+++... .++.+.+|+|+|||||||
T Consensus 215 y~~G~~~~--~~f~~~~-------~~~lD~G~dfYA~qtf~~--~~R~i~~gW~~~~~~~~~~p~~~~gw~g~lslPRel 283 (294)
T d1uypa2 215 FSMGELKE--GKLNVEK-------RGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPREL 283 (294)
T ss_dssp EEEEEEET--TEEEEEE-------EEESCCSSSCEEEEECBS--CSSEEEEEESSCTTTGGGCCGGGGTEECCBCCCEEE
T ss_pred eEeeeecC--CeEEeec-------ceEEccCCceeeccCccC--CCCEEEEEECCCCcccccCCCccCCcccceeeCEEE
Confidence 99999986 4898764 47899999 999999987 4899999999998754 345577999999999999
Q ss_pred EEeccCCeEEecc
Q 008686 354 WLDKSGRQLMQWP 366 (557)
Q Consensus 354 ~l~~~g~~L~q~P 366 (557)
+|+ +| +|+|+|
T Consensus 284 ~l~-~~-~L~q~P 294 (294)
T d1uypa2 284 YVE-NN-ELKVKP 294 (294)
T ss_dssp EEE-TT-EEEEEE
T ss_pred EEE-CC-EEEecC
Confidence 996 66 799998
|
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=100.00 E-value=1.5e-73 Score=596.24 Aligned_cols=307 Identities=27% Similarity=0.540 Sum_probs=247.3
Q ss_pred CCCCCCcccccccCCCCCccCCcceEEECCEEEEEEEEe----cCCCeEEEEEEeCCCCcceecCCCCCCCCC-cC-CCc
Q 008686 43 ITSQPYRTGYHFQPPSSWMNDPNGPMIYKGIYHFFYQYK----LWDTVVWGHSTSTDMVNWTPHDAAIYPSQP-FD-ANS 116 (557)
Q Consensus 43 ~~~~~~rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyq~~----~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~-~d-~~g 116 (557)
.++++|||+|||+|+.||||||||++|++|+||||||++ .||+|+||||+|+|||||+++|+||.|+.. .| ..+
T Consensus 2 ~y~~p~Rp~~H~~p~~gwlNDPnGl~y~~G~yHlFyQ~nP~~~~~g~~~WgHa~S~DLv~W~~~p~al~p~~~~~d~~~~ 81 (353)
T d1y4wa2 2 NYDQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGSDVTEM 81 (353)
T ss_dssp CCCCTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSCEEEEEEECCBTTTSCCCBE
T ss_pred CCCCCCcCcEeecCCCCCcCCCccceEECCEEEEEEecCCCCCCCCCeEEEEEEeccccceeECCccccCCccCcCCCCc
Confidence 478999999999999999999999999999999999999 789999999999999999999999999853 33 467
Q ss_pred eEeeeEEEccCC----------eEEEEEeeecC------------CCcceEEEEEEcCCCCCccceeecC-CCCceEecC
Q 008686 117 CWSGSVTILPGG----------NPAVLYTGIDA------------GNKQVQNLAVPKNLSDPYLKEWIKP-PENPLMVPA 173 (557)
Q Consensus 117 v~SGsav~~~dg----------~~~l~YTg~~~------------~~~~~q~lA~s~d~~d~~l~~w~k~-~~~Pvi~~p 173 (557)
||||||++..++ .+++||||+.. .+.+.|++|+|.|.+ ++|+|+ +.||||..+
T Consensus 82 ~~SGsav~~~~~~~~~~~~g~~~l~~~YT~~~~~~~~~~~~~~~~~~~~~q~~A~s~d~g----~~~~~~~~~npvi~~~ 157 (353)
T d1y4wa2 82 YFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPNP 157 (353)
T ss_dssp EEEEEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCSC
T ss_pred cccCceEecCCCccccccCCCceEEEEEeeeecccccccCcccccCCcEEEEEEEECCCC----cceEEecCCCeEecCC
Confidence 999999986432 57899999843 235789999998864 677775 579999644
Q ss_pred C-CC--CCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccccccCCCCCceeecceEEecCCCCC
Q 008686 174 D-QI--DPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPK 250 (557)
Q Consensus 174 ~-~~--~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~ 250 (557)
+ +. ...+||||+|+|. +++.|+|+++ .....|+|+||+|+||.+|++.+.+......++||||||||+|+..+
T Consensus 158 ~~~~~~~~~~fRDP~V~~~-~~~~~~~~~~-~~~~~g~v~ly~S~Dl~~W~~~g~l~~~~~~g~~wECPdlf~l~~~~-- 233 (353)
T d1y4wa2 158 PSPYEAEYQNFRDPFVFWH-DESQKWVVVT-SIAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS-- 233 (353)
T ss_dssp CTTCGGGTTSEEEEEEEEE-TTTTEEEEEE-EEGGGTEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEBTT--
T ss_pred CCCCcccccccCCCceEEE-CCCCEEEEEE-eecCCCeEEEEecCCCCceEEeccccccCCCCcceeeeEEEEeecCC--
Confidence 3 32 3469999998776 4444444444 44456899999999999999998754444567899999999997543
Q ss_pred CeeecccCCceeEEEEEeecC-------CceeEEEEEEEecCCCeEeecCCcc--CCCCccccccCC-CccceeeeeCCC
Q 008686 251 GVDTSVIGPNIKHVLKVSLSN-------YQQDYYTIGTYNITTDTYIAEEGSF--DDNSGLRYDYGK-FYGSKTFFDSAK 320 (557)
Q Consensus 251 ~~~~~~~~~~~~~vl~~s~~~-------~~~~~Y~vG~~d~~~~~F~~~~~~~--~~~~~~~lD~G~-fYA~qt~~d~~~ 320 (557)
+++.+|||+.+... ..++.|++|+||+. +|+|+.+.. ....+++||+|+ |||||||.++++
T Consensus 234 -------~~~~~~vl~~g~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~d~~~ 304 (353)
T d1y4wa2 234 -------GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSL 304 (353)
T ss_dssp -------SSCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECBSCCG
T ss_pred -------CCceEEEEEecccCCCCcccccccceEEEEEecCc--eeeecCCccccCCCccceeecCcCeeECCceeCCCC
Confidence 23469999887532 24588999999864 788765321 123457899999 999999998767
Q ss_pred CcEEEEEEecCCCCCCCCCCCCccccccccEEEEEeccC--CeEEecc
Q 008686 321 NRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKSG--RQLMQWP 366 (557)
Q Consensus 321 gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~~g--~~L~q~P 366 (557)
|||||||||++++...+..+.+|+|+|||||||+|+++| .+|+|+|
T Consensus 305 gRri~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~~~~~~L~Q~P 352 (353)
T d1y4wa2 305 NDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352 (353)
T ss_dssp GGCEEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEecCCCccCCCCCCCCcceeeEeCEEEEEEECCCCCEEEEcC
Confidence 999999999999877666778999999999999998643 3799998
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=1.1e-24 Score=230.16 Aligned_cols=271 Identities=15% Similarity=0.138 Sum_probs=181.3
Q ss_pred ccCCcceEE-ECCEEEEEEEEe---cCCCe----EEEEEEeCCCCcceecCCCCCCCC--------CcCCCceEeeeEEE
Q 008686 61 MNDPNGPMI-YKGIYHFFYQYK---LWDTV----VWGHSTSTDMVNWTPHDAAIYPSQ--------PFDANSCWSGSVTI 124 (557)
Q Consensus 61 ~nDPnG~~~-~~G~YHlfyq~~---~~g~~----~Wgha~S~DlvhW~~~~~aL~P~~--------~~d~~gv~SGsav~ 124 (557)
+.|++|-.. ++|.+++|++.. .+... .+.|+.|+||.||++.+.+|.+.. .++..+-|||||++
T Consensus 57 l~d~~g~~~~~~G~~~~f~L~a~~~~~~d~~i~~~y~~~~s~dl~~W~~~G~vf~d~~~~~~~~~~~~~~~~eWSGSAv~ 136 (440)
T d1oyga_ 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATF 136 (440)
T ss_dssp EECTTSSBCCBTTEEEEEEEEECTTCTTCCEEEEEEEETTCCSGGGCEEEEESCCTTHHHHTTCTTGGGCCEEEEEEEEE
T ss_pred eECCCCCEEEECCEEEEEEEeCCCCCCCCCeEEEEEeecCCCccCCCEECccccCCCccccccccccCCCCccCccceEE
Confidence 568887655 699999999988 22333 345555889999999998775542 23345679999998
Q ss_pred ccCCeEEEEEeeecCCC--cceEEEEE---EcCCCCCccceeecCCCCceEecCCC--C---------------CCCCcc
Q 008686 125 LPGGNPAVLYTGIDAGN--KQVQNLAV---PKNLSDPYLKEWIKPPENPLMVPADQ--I---------------DPGSFR 182 (557)
Q Consensus 125 ~~dg~~~l~YTg~~~~~--~~~q~lA~---s~d~~d~~l~~w~k~~~~Pvi~~p~~--~---------------~~~~fR 182 (557)
..||+++|||||+.... .+++..|. +.+ +....|++...+++|-.|++ + +..+||
T Consensus 137 ~~DG~~~LfYTg~~~~~~~~q~i~~a~~~~~~d---~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fR 213 (440)
T d1oyga_ 137 TSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSAS---DSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLR 213 (440)
T ss_dssp CTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEEC---SSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCE
T ss_pred ccCCeEEEEEEeccCCCCCcceEEEEEEEEeec---CCcceeecccCCceeecCCCccceeeecccccCCCCCCCccccc
Confidence 77999999999976432 23222221 122 12366776555555533322 1 245899
Q ss_pred CCeEEEecCCCeEEEEEeeecC-C-----------------------------------------ccEEEEE-EeCCCCC
Q 008686 183 DPTTAWIGPDKIWRVIIGSKIN-D-----------------------------------------TGLAILY-RSKDFVN 219 (557)
Q Consensus 183 DP~V~~~~~~g~~~m~~ga~~~-~-----------------------------------------~G~i~ly-~S~Dl~~ 219 (557)
||+| |. .+|+|||++++... . .|.|.|+ .|+|+.+
T Consensus 214 DP~v-~~-~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~D~~~ 291 (440)
T d1oyga_ 214 DPHY-VE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTL 291 (440)
T ss_dssp EEEE-EE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTTSSE
T ss_pred CCce-ee-eCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCCCccc
Confidence 9995 55 47999999987541 0 2455555 5899999
Q ss_pred CEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC-------Cce----eEEEEEEEecCCCe
Q 008686 220 WTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN-------YQQ----DYYTIGTYNITTDT 288 (557)
Q Consensus 220 W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~-------~~~----~~Y~vG~~d~~~~~ 288 (557)
|+..++++.......|||||++|+++ | ||+|+.|.+. .+. ..++|| |...+.
T Consensus 292 We~~~pLl~a~~v~d~~ErP~I~~~n--G-------------KYYLFtss~~~~~a~~~~~~~~~~~~g~Vs--dsl~Gp 354 (440)
T d1oyga_ 292 KKVMKPLIASNTVTDEIERANVFKMN--G-------------KWYLFTDSRGSKMTIDGITSNDIYMLGYVS--NSLTGP 354 (440)
T ss_dssp EEEEEEEEECTTTCSCCEEEEEEEET--T-------------EEEEEEEEEGGGCCCTTCCTTCEEEEEEEE--SSTTCC
T ss_pred ceecCcceeccCCCCeEECCEEEEEC--C-------------EEEEEEecccccccCCCcCCCCceEEEEEC--CCCCCC
Confidence 99987655555567799999999998 7 9999877531 111 223455 445668
Q ss_pred EeecCCc-cCCCCccccccCC-CccceeeeeCCCCcEEEEEEecCCCCCCCCCCCCccccccccEEEEEecc
Q 008686 289 YIAEEGS-FDDNSGLRYDYGK-FYGSKTFFDSAKNRRILWGWINESSTRSDNLKKGWAGLQATPRNLWLDKS 358 (557)
Q Consensus 289 F~~~~~~-~~~~~~~~lD~G~-fYA~qt~~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~~ 358 (557)
|+|.+.. .........|+++ .|+..++.+....++++++||.++.... ...|.++-+.+|.|+.+
T Consensus 355 y~PlN~sGlvl~~~~~~~~~~~~Ys~~~~p~g~~~~~lv~s~~~~~~~~~-----~~g~t~APt~~l~l~g~ 421 (440)
T d1oyga_ 355 YKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYA-----DKQSTFAPSFLLNIKGK 421 (440)
T ss_dssp CEEGGGTSEEEEECCCTTCTTCEEEEEEECCSSSSEEEEEEEESCTTSCS-----SCCCEECBCEEEEEETT
T ss_pred CeecCCCcceeccCCCCCcCcccceeEEecCCCCceEEEEEeecCcCccc-----ccCCccCCcEEEEEcCC
Confidence 8886521 1111112557788 6999999866456889999999987422 24578888889999744
|
| >d1y4wa1 b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=99.88 E-value=3.7e-22 Score=183.97 Aligned_cols=133 Identities=23% Similarity=0.318 Sum_probs=99.4
Q ss_pred ccceeEEEEEEEecccccccccccccCCCCcccceEEEEEEcCCCceeEEEEEEEeeCCCceEEEEeecCCCCCCCCCCC
Q 008686 397 TAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCPFGLLVLASNGLQEYTAVFFRIFKGQDRHIVLMCSDQSRSSINDDND 476 (557)
Q Consensus 397 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fgl~l~~s~d~~e~t~i~~d~~~~~~~~~~~~~vDr~rS~~~~~~~ 476 (557)
.+..++|+++|++.. ....|||.|++++|++|+|.|.||... +. +++||++|+...-..
T Consensus 30 ~g~~~el~l~~~~~~---------------~a~~fgl~lr~s~d~~e~t~i~yd~~~---~~---l~vDRs~sg~~~~~~ 88 (164)
T d1y4wa1 30 TGETFKVDLSFSAKS---------------KASTFAIALRASANFTEQTLVGYDFAK---QQ---IFLDRTHSGDVSFDE 88 (164)
T ss_dssp CCSSEEEEEEEETTC---------------SSSEEEEEEEECTTSSSCEEEEEETTT---TE---EEEECTTSSCCTTCT
T ss_pred cCcEEEEEEEEEcCC---------------CccEEEEEEEEcCCCCEEEEEEEECCC---CE---EEEECCCCCCCcccc
Confidence 456778888776421 123699999999999999999999643 32 467999997432111
Q ss_pred CCcceeEEeecC-CCCeEEEEEEEeCCeEEEEecCCceEEEEEeecCCCcCCceEEEEEecCceeEEEEEEEeeccCcc
Q 008686 477 KTSYGAFLDLDP-VHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIHDKAHLYAFNNGTEKVNITSLRAWSMKKA 554 (557)
Q Consensus 477 ~~~~~~~~~~~~-~~~~~~LrIfvD~S~vEVFvNdG~~~lTsRiyp~~~~~~~~~i~~~~~g~~~~~~~~l~~w~m~~~ 554 (557)
........++.+ .++.++||||||+|+||||+|||+.|||+|+||..+ ..+|.++++|+ .+++.++++|+|+||
T Consensus 89 ~~~~~~~~~~~~~~~~~l~Lri~vD~ssvEvF~NdG~~~~T~~~fp~~~---~~~i~~~s~gg-~~~~~~l~v~~lksi 163 (164)
T d1y4wa1 89 TFASVYHGPLTPDSTGVVKLSIFVDRSSVEVFGGQGETTLTAQIFPSSD---AVHARLASTGG-TTEDVRADIYKIAST 163 (164)
T ss_dssp TTSCEEEEECCCCTTSEEEEEEEEETTEEEEEETTTTEEEEEECCCCTT---CCEEEEEEESS-CEEEEEEEEEEBCCC
T ss_pred cccceeEEecccCCCCeEEEEEEEECcEEEEEECCCeEEEEEEecCCCC---CCEEEEEEcCC-eEEEEEEEEEecccc
Confidence 111122233332 468999999999999999999999999999999764 56788887764 578889999999987
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.75 E-value=3.4e-17 Score=166.68 Aligned_cols=155 Identities=15% Similarity=0.245 Sum_probs=118.1
Q ss_pred CCcceEEECCEEEEEEEEe-cCCCeEEEEEEeCCCCcceecC-CCCCCCC---CcCCCceEeeeEEEccCCeEEEEEeee
Q 008686 63 DPNGPMIYKGIYHFFYQYK-LWDTVVWGHSTSTDMVNWTPHD-AAIYPSQ---PFDANSCWSGSVTILPGGNPAVLYTGI 137 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~-~~g~~~Wgha~S~DlvhW~~~~-~aL~P~~---~~d~~gv~SGsav~~~dg~~~l~YTg~ 137 (557)
+| |+++++|+|||+|+.. ..+.++|++|+|+|++||+..+ +++.|+. .++..||++++++.. +|++||+||+.
T Consensus 47 Np-~~i~~~g~~~ll~r~~~~~~~~~ig~A~S~DGi~w~~~~~pv~~p~~~~~~~~~~gv~DPrv~~~-~d~yym~yt~~ 124 (327)
T d1vkda_ 47 NS-AVVPYNGEFVGVFRIDHKNTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVKI-EDTYYITFCTD 124 (327)
T ss_dssp EE-EEEEETTEEEEEEEEEETTSCEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEEE-TTEEEEEEEEE
T ss_pred cc-EEEEECCEEEEEEEecCCCCceEEEEEEcCCccCCEeCCCCeecCCCCCcccccCcEEcceEEEE-CCEEEEEEEec
Confidence 36 8999999999999998 7789999999999999999764 5677764 366789999999985 89999999987
Q ss_pred cCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEec-CCCeEEEEEeeec---CCccEEEEEE
Q 008686 138 DAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIG-PDKIWRVIIGSKI---NDTGLAILYR 213 (557)
Q Consensus 138 ~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~-~~g~~~m~~ga~~---~~~G~i~ly~ 213 (557)
. ...++++|+|+|. ++|+|.+ +++. ..-+|+. +|.+ .+|+|+|+..... ...|.|.+.+
T Consensus 125 ~--~~~~i~lA~S~D~-----~~w~k~g--~~~~-------~~~kd~~-lfpeki~Gky~ml~Rp~~~~~~~~~~I~la~ 187 (327)
T d1vkda_ 125 D--HGPTIGVGMTKDF-----KTFVRLP--NAYV-------PFNRNGV-LFPRKINGKYVMLNRPSDNGHTPFGDIFLSE 187 (327)
T ss_dssp S--SSEEEEEEEESSS-----SSEEEEC--CSSS-------SSEEEEE-ECSSCBTTBEEEEEEECCSSSCSCCCEEEEE
T ss_pred C--CCcEEEEEEecCc-----chheecC--CccC-------ccccCce-EeeeeccCeEEEEEeeccCCCcccceEEEEc
Confidence 5 4567899999984 8999963 3322 1347887 4543 4789999964432 2356799999
Q ss_pred eCCCCCCEEcccccccCCCCCcee
Q 008686 214 SKDFVNWTKAEQSLYSTNQSGMWE 237 (557)
Q Consensus 214 S~Dl~~W~~~~~~~~~~~~~~~~E 237 (557)
|+||.+|+....++. ....+.||
T Consensus 188 S~Dl~~W~~~~~v~~-~~~~~~wd 210 (327)
T d1vkda_ 188 SPDMIHWGNHRFVLG-RSSYNWWE 210 (327)
T ss_dssp ESSSSCBEEEEEEEC-CCSSCGGG
T ss_pred CCCcccccccceecc-cCCCCcee
Confidence 999999997654333 23334444
|
| >d1uypa1 b.29.1.19 (A:295-432) Beta-fructosidase (invertase), C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Beta-fructosidase (invertase), C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=99.72 E-value=6.1e-17 Score=144.50 Aligned_cols=138 Identities=17% Similarity=0.202 Sum_probs=85.9
Q ss_pred hHHHHhhhcCccccCCeEecCCceEEecccccceeEEEEEEEecccccccccccccCCCCcccceEEEEEEcCCCceeEE
Q 008686 367 ISEIEKLRGNQVKWPAKLLERGSMVGITGITAAQADVEISFQTTAFEKAEVLDSIWTNPQFLCPFGLLVLASNGLQEYTA 446 (557)
Q Consensus 367 v~el~~LR~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fgl~l~~s~d~~e~t~ 446 (557)
|+||++||++++. .........+. ..+..+|++++|+.. +.+.+ +.++ +.
T Consensus 1 V~El~~LRk~~~~----~~~~~~~~~l~-~~~~~~El~~~~~~~--------------------~~~~~--~~~~---~~ 50 (138)
T d1uypa1 1 VDELLALRKRKVF----ETAKSGTFLLD-VKENSYEIVCEFSGE--------------------IELRM--GNES---EE 50 (138)
T ss_dssp CGGGGGGEEEEEE----EESSCEEEECC-CSSSCEEEEEEEEEE--------------------EEEEE--ECSS---CE
T ss_pred CHHHHHhhhcccc----ccccCCcEEec-cCCceEEEEEEeeCC--------------------ceeee--cCCc---eE
Confidence 5799999987642 11111222222 344567777766431 23332 3332 23
Q ss_pred EEEEEeeCCCceEEEEeecCCCCCCCCCCCCCcceeEEeecCCCCeEEEEEEEeCCeEEEEecCCceEEEEEeecCCCcC
Q 008686 447 VFFRIFKGQDRHIVLMCSDQSRSSINDDNDKTSYGAFLDLDPVHEKLSIRSLIDRSIVESFGGGGKACITARIYPTLAIH 526 (557)
Q Consensus 447 i~~d~~~~~~~~~~~~~vDr~rS~~~~~~~~~~~~~~~~~~~~~~~~~LrIfvD~S~vEVFvNdG~~~lTsRiyp~~~~~ 526 (557)
+.|+..+ +. +.+||++|+...+. ....+++ .++.++||||||+|+||||+|||+ |||+||||...
T Consensus 51 ~~~~~~~---~~---l~~dR~~s~~~~~~-----~r~~~~~-~~~~~~LrIfvD~SsvEiFiNdg~-v~t~rvfP~~~-- 115 (138)
T d1uypa1 51 VVITKSR---DE---LIVDTTRSGVSGGE-----VRKSTVE-DEATNRIRAFLDSCSVEFFFNDSI-AFSFRIHPENV-- 115 (138)
T ss_dssp EEEEEET---TE---EEEECTTSSTTCCC-----EEEEECC-CCSSEEEEEEEETTEEEEEETTTE-EEEEECCCSSC--
T ss_pred EEEEecC---CE---EEEEeeccccCCCc-----eEEEEcC-CCCcEEEEEEEEeeEEEEEECCCE-EEEEEEcCCCC--
Confidence 5566542 32 35799998743211 1123332 468899999999999999999996 89999999875
Q ss_pred CceEEEEEecCceeEEEEEEEeeccCcccc
Q 008686 527 DKAHLYAFNNGTEKVNITSLRAWSMKKAQI 556 (557)
Q Consensus 527 ~~~~i~~~~~g~~~~~~~~l~~w~m~~~~~ 556 (557)
...|.+.++ ..++++|+|+||-+
T Consensus 116 -~~~i~~~~~------~~~~~~~~Lksiw~ 138 (138)
T d1uypa1 116 -YNILSVKSN------QVKLEVFELENIWL 138 (138)
T ss_dssp -CCEEEEEEE------EEEEEEEEECCSCC
T ss_pred -CcEEEEEec------ccEEEEEEcccccC
Confidence 345655432 12589999999854
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=99.66 E-value=3.4e-15 Score=149.03 Aligned_cols=191 Identities=17% Similarity=0.166 Sum_probs=128.9
Q ss_pred ccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCCc-------CCCceEeeeEEEccCCeEEEE
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQPF-------DANSCWSGSVTILPGGNPAVL 133 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~-------d~~gv~SGsav~~~dg~~~l~ 133 (557)
++||+ ++.++|+||||+....+ ...+.+++|+||+||+.++.++.+...+ ...++|+++++.. +|+++||
T Consensus 10 ihDP~-vi~~~g~YY~~~t~~~~-~~g~~i~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~g~yyly 86 (291)
T d1uv4a1 10 LHDPT-MIKEGSSWYALGTGLTE-ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQYY-NGKYWLY 86 (291)
T ss_dssp CSSCE-EEEETTEEEEEEECCTT-SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEEE-TTEEEEE
T ss_pred ccCCE-EEEECCEEEEEEecCCC-CCcEEEEECCCCCCCEECcccccCCcccccccCCccCCcccceEEEEE-CCEEEEE
Confidence 56996 89999999999875422 3458899999999999988777554322 1357999999875 9999999
Q ss_pred EeeecCC-CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEE
Q 008686 134 YTGIDAG-NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILY 212 (557)
Q Consensus 134 YTg~~~~-~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly 212 (557)
|++.... ....+++|+|++.. ...|+.. ++++...+. .....+||.|++. ++|++||+++... +.|.++
T Consensus 87 y~~~~~~~~~~~i~~a~s~~~~---~Gpw~~~--~~~~~~~~~-~~~~~iDp~vf~D-~dG~~Y~~~~~~~---~~i~i~ 156 (291)
T d1uv4a1 87 YSVSSFGSNTSAIGLASSTSIS---SGGWKDE--GLVIRSTSS-NNYNAIDPELTFD-KDGNPWLAFGSFW---SGIKLT 156 (291)
T ss_dssp EEECCTTCSCEEEEEEEESCTT---TTCCEEE--EEEEEECTT-SSSCCCSCEEEEC-TTSCEEEEECBST---TCEEEE
T ss_pred EEecCCCCCcceEEEEEeCCCC---CCCCCcC--ccccccccC-CCCCccCceEEEe-cCCcEEEEecccC---CceEEE
Confidence 9987653 45667899987631 1357763 344433222 2346789997655 7899999997542 235556
Q ss_pred Ee-CCCCCCEEcccc--cc-cCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecCC---ceeEEEEEE
Q 008686 213 RS-KDFVNWTKAEQS--LY-STNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSNY---QQDYYTIGT 281 (557)
Q Consensus 213 ~S-~Dl~~W~~~~~~--~~-~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~~---~~~~Y~vG~ 281 (557)
+. .|. +...+.+ +. .......+|+|.+|+.+ | +++|++|.... ....|.++-
T Consensus 157 ~l~~~~--~~~~g~~~~i~~~~~~~~~~EgP~i~k~~--g-------------~Yyl~~S~~~~~~~~~~~y~v~~ 215 (291)
T d1uv4a1 157 KLDKST--MKPTGSLYSIAARPNNGGALEAPTLTYQN--G-------------YYYLMVSFDKCCDGVNSTYKIAY 215 (291)
T ss_dssp EECTTT--CSEEEEEEEEECCTTTTTCEEEEEEEEET--T-------------EEEEEEEEECSSSSSCCEEEEEE
T ss_pred eecccc--ccCcCceeEEEecCCCCccccccEEEEEC--C-------------EEEEEEecCcccCCCCCCceeEE
Confidence 54 333 3333332 22 22345689999999997 6 89999886431 234565553
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=99.53 E-value=1.3e-13 Score=137.91 Aligned_cols=182 Identities=18% Similarity=0.155 Sum_probs=119.9
Q ss_pred ccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCCC-------cCCCceEeeeEEEccCCeEEEE
Q 008686 61 MNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQP-------FDANSCWSGSVTILPGGNPAVL 133 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~-------~d~~gv~SGsav~~~dg~~~l~ 133 (557)
+.||+ ++.++|+||||.... ++...+|+||+||+.++.+|.+... +...++|++.++.. +|++++|
T Consensus 7 ~~DP~-v~~~~g~yYl~~t~~-----gi~~~~S~DLvnW~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~g~~~~~ 79 (318)
T d1gyha_ 7 VHDPV-MTREGDTWYLFSTGP-----GITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQH-KGLFYLY 79 (318)
T ss_dssp CSSCE-EEEETTEEEEEESEE-----TCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEEE-TTEEEEE
T ss_pred CCCCE-EEEECCEEEEEEeeC-----CEEEEECCCCCCCeECCccccCCccccccCCCcCCCceECCEEEEE-cCceEEE
Confidence 56997 788999999987643 3557789999999999988865432 23457999999875 8999999
Q ss_pred EeeecCC-CcceEEEEEEcCCC-CCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEE
Q 008686 134 YTGIDAG-NKQVQNLAVPKNLS-DPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAIL 211 (557)
Q Consensus 134 YTg~~~~-~~~~q~lA~s~d~~-d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~l 211 (557)
|++...+ ....+++|++.... +.....|++. .++....+......++||.|++ +++|++||++++... .+.+
T Consensus 80 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~iDp~v~~-d~dG~~Yl~~~~~~~---~~~~ 153 (318)
T d1gyha_ 80 YSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDK--GIVIESVPQRDLWNAIAPAIIA-DDHGQVWMSFGSFWG---GLKL 153 (318)
T ss_dssp EEECCTTSCCEEEEEEEESCSCTTSTTCCCEEE--EEEEEECTTTCSSCCCCCEEEE-CTTSCEEEEECBSTT---CEEE
T ss_pred EEEecCCCcccceeEEEEeccCCCccccccccC--ceecccCCCCCCCceEccceEe-ecCCcEEEeccCCCC---Ceee
Confidence 9987653 34566777764321 1113467763 2344433344456789999654 478999999986432 2333
Q ss_pred EEe-CCCC------CCEEccc----ccccC--CCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 212 YRS-KDFV------NWTKAEQ----SLYST--NQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 212 y~S-~Dl~------~W~~~~~----~~~~~--~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
.+. .|+. .|..... ++... ....++|||.+|+.+ | +++|++|..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~yS~~ 210 (318)
T d1gyha_ 154 FKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKG--D-------------YYYLFASWG 210 (318)
T ss_dssp EEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred EecCccceeeccccccccccccccceeeccCCCCCceeecCEEEEEC--C-------------EEEEEEecC
Confidence 333 2322 2222211 11111 134689999999998 5 899998864
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=99.48 E-value=4.4e-13 Score=134.39 Aligned_cols=182 Identities=19% Similarity=0.193 Sum_probs=120.6
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCC--------CcCCCceEeeeEEEccCCeE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQ--------PFDANSCWSGSVTILPGGNP 130 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~--------~~d~~gv~SGsav~~~dg~~ 130 (557)
-|..||+ +++++|+||||... .++..++|+||+||+..+.+|.+.. ..+..++|++.++.. +|++
T Consensus 22 ~~~~DP~-i~~~~g~yY~~~t~-----~gi~i~~S~DL~nW~~~g~~l~~~~~~~~~~~~~~~~~~~WAP~v~~~-~g~y 94 (312)
T d1wl7a1 22 LWAHDPV-IAKEGSRWYVFHTG-----SGIQIKTSEDGVHWENMGRVFPSLPDWCKQYVPEKDEDHLWAPDICFY-NGIY 94 (312)
T ss_dssp CBCSSCE-EEEETTEEEEEESE-----ETCEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEEE-TTEE
T ss_pred cCcCCCE-EEEECCEEEEEEec-----CCceEEEcCCCCCceECcccccCCcccccccCCcccCCceEcceEEEe-CCEE
Confidence 4778996 78899999998753 2567899999999999988875432 245678999999875 8999
Q ss_pred EEEEeeecCC-CcceEEEEEEcC--CCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCcc
Q 008686 131 AVLYTGIDAG-NKQVQNLAVPKN--LSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTG 207 (557)
Q Consensus 131 ~l~YTg~~~~-~~~~q~lA~s~d--~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G 207 (557)
+||||+.... ....+++|.+.. ..++ ...|++ .+|++..+.. +...++||.++ .+++|++||+.+... +
T Consensus 95 yl~~t~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~--~~~~~~~~~~-~~~~~iD~~~f-~d~dG~~y~~~~~~~---~ 166 (312)
T d1wl7a1 95 YLYYSVSTFGKNTSVIGLATNRTLDPRDP-DYEWKD--MGPVIHSTAS-DNYNAIDPNVV-FDQEGQPWLSFGSFW---S 166 (312)
T ss_dssp EEEEEECCTTCCCEEEEEEEESCSCTTST-TCCCEE--EEEEEEECTT-SSSCCCSCEEE-ECTTSCEEEEECBST---T
T ss_pred EEEEEeecCCcccceeeEEEEecccCCCC-cccccc--ccceecCCCC-CCCCcCCCcee-EccCCcEEEeecCCC---C
Confidence 9999988653 344556665432 1222 245555 3465543322 34578999965 447899999887543 2
Q ss_pred EEEEEEe-CCCCCCEEccccccc---CCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 208 LAILYRS-KDFVNWTKAEQSLYS---TNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 208 ~i~ly~S-~Dl~~W~~~~~~~~~---~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
.+.+++. .|..........+.. .......|+|.+|+.+ | +++|++|..
T Consensus 167 ~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~EgP~v~k~~--g-------------~yYl~ys~~ 218 (312)
T d1wl7a1 167 GIQLIQLDTETMKPAAQAELLTIASRGEEPNAIEAPFIVCRN--G-------------YYYLFVSFD 218 (312)
T ss_dssp CEEEEEBCTTTCSBCTTCCCEEEECCSSSSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred ceeEEEEcCcCCcCcCCceEEEecccCCCCCcccccEEEEEC--C-------------cEEEEEecC
Confidence 3555553 343322111112211 1234578999999987 5 899998864
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=99.37 E-value=9e-11 Score=117.59 Aligned_cols=178 Identities=15% Similarity=0.168 Sum_probs=114.5
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCC------CcCCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQ------PFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~------~~d~~gv~SGsav~~~dg~~~l 132 (557)
|+..||. +++++|+||||+....+ ...+..++|+||+||+.++.+|.... .+....+|.+.+... +|++||
T Consensus 9 ~~~aDP~-vi~~~~~yY~~~tt~~~-~~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~G~~yl 85 (317)
T d1yrza2 9 GFHPDPS-IVRVGDDYYIATSTFEW-FPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSYH-DGTFYL 85 (317)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE-ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEEE-TTEEEE
T ss_pred CCCCCCE-EEEECCEEEEEEccCCC-CCCeEEEECCCCCCCeECCccccCccccccCCCcccceeecceEEEE-CCEEEE
Confidence 5678996 78899999999874421 11355679999999999988775443 234456899998874 999999
Q ss_pred EEeeecCC----CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCC---
Q 008686 133 LYTGIDAG----NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND--- 205 (557)
Q Consensus 133 ~YTg~~~~----~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~--- 205 (557)
||++.... ....+.+|++.+.. ..|+. |+.. .....||.++ .+++|+.||+.+.....
T Consensus 86 yy~~~~~~~~~~~~~~~~~~~a~~p~----gp~~~----~~~~------~~~~iDp~~f-~D~dG~~Yl~~~~~~~~~~~ 150 (317)
T d1yrza2 86 IYTDVKQWHGAFKDAHNYLVTAQNIE----GPWSD----PIYL------NSSGFDPSLF-HDDDGRKWLVNMIWDYRKGN 150 (317)
T ss_dssp EEEEEEECSSSCCEEEEEEEEESSSS----SCCCC----CEEC------CCSCSCCEEE-ECTTSCEEEEEEEECCCTTS
T ss_pred EEEEeccCCCCcccceEEEEecCCCC----CCccc----eeee------cCCccCCcEE-EecCCCEEEEEeccCcCCCC
Confidence 99975431 23445567766543 24542 3332 1345799964 45789999988765421
Q ss_pred --ccEEEEEE-eCCCCCCEEccccc--ccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 206 --TGLAILYR-SKDFVNWTKAEQSL--YSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 206 --~G~i~ly~-S~Dl~~W~~~~~~~--~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
...+.+.. +.+ .++..+.+. .........|.|.+|+.+ | +++|++|...
T Consensus 151 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--g-------------~yyl~~s~~~ 204 (317)
T d1yrza2 151 HPFAGIILQEYSEA--EQKLVGPVKNIYKGTDIQLTEGPHLYKKD--G-------------YYYLLVAEGG 204 (317)
T ss_dssp CSEEEEEEEEEETT--TTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred ccccceeeeecCcc--cCeEcCCceEEEeccCCCcccCceEEEEC--C-------------EEEEEEccCC
Confidence 11233333 233 344444322 222345578999999987 5 8888888653
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.37 E-value=1e-10 Score=117.09 Aligned_cols=179 Identities=15% Similarity=0.126 Sum_probs=116.3
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCC------CcCCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQ------PFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~------~~d~~gv~SGsav~~~dg~~~l 132 (557)
|+..||. +++++|+|+||+....++ ..+..++|+||+||+.++.+|.... .....++|.+.++.. +|++||
T Consensus 8 ~~~aDP~-v~~~~~~yY~~~tt~~~~-~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~g~yyl 84 (321)
T d1y7ba2 8 GFNPDPS-ICRADTDYYIATSTFEWF-PGVQIHHSKDLVNWHLVAHPLNRTSLLDMKGNPNSGGIWAPDLSYH-DGKFWL 84 (321)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTEE-SBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEEE-TTEEEE
T ss_pred CCCCCCE-EEEECCEEEEEEecCCCC-CCeEEEECCCccCCEEccccccCCcccccCCCcccCcccCceEEEE-CCEEEE
Confidence 4567996 788999999999754221 1355679999999999987764332 334567999999875 999999
Q ss_pred EEeeecCC----CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC----
Q 008686 133 LYTGIDAG----NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN---- 204 (557)
Q Consensus 133 ~YTg~~~~----~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~---- 204 (557)
||+..... ..+.+.+|++++.. ..|+.. ..+ .....||.++ .+++|+.+|+++....
T Consensus 85 yys~~~~~~~~~~~~~~~~a~a~~p~----Gp~~~~---~~~-------~~~~~D~~~~-~d~dg~~~~~~~~~~~~~~~ 149 (321)
T d1y7ba2 85 IYTDVKVTDGMWKDCHNYLTTCESVD----GVWSDP---ITL-------NGSGFDASLF-HDNDGKKYLVNMYWDQRTYN 149 (321)
T ss_dssp EEEEESCCSSSCCCEEEEEEEESSTT----SCCCCC---EEC-------CCSCSCCEEE-ECTTSCEEEEEEEECCCTTS
T ss_pred EEEeeccCCCCccceeeEeeecCCCC----CCcccc---eee-------cccccCCcEE-EEcCCCEEEEEeccCCCccc
Confidence 99987542 23456778887653 345431 111 1245799854 4478888888875431
Q ss_pred -CccEEEEEE-eCCCCCCEEcccccccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeec
Q 008686 205 -DTGLAILYR-SKDFVNWTKAEQSLYSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLS 270 (557)
Q Consensus 205 -~~G~i~ly~-S~Dl~~W~~~~~~~~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~ 270 (557)
..+.+.+.. +.|..+..-....+.........|.|.+|+-+ | +++|++|..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~yyl~~s~~ 202 (321)
T d1y7ba2 150 HNFYGIVLQEYSDKEKKLIGKAKIIYKGTDIKYTEGPHIYHIG--D-------------YYYLFTAEG 202 (321)
T ss_dssp CSEEEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEES
T ss_pred cCccceeeEeeCCCcceEcCCceEEeeccCCCccccceEEEEC--C-------------EEEEEEcCC
Confidence 122333333 45655443322223333344567999999976 5 788887764
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=99.29 E-value=1.2e-09 Score=109.47 Aligned_cols=179 Identities=13% Similarity=0.123 Sum_probs=116.1
Q ss_pred CCccCCcceEEECCEEEEEEEEecCCCeEEEEEEeCCCCcceecCCCCCCCC------CcCCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYKLWDTVVWGHSTSTDMVNWTPHDAAIYPSQ------PFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~~~g~~~Wgha~S~DlvhW~~~~~aL~P~~------~~d~~gv~SGsav~~~dg~~~l 132 (557)
|+..||. ++.++|+||||+....+ ...+..++|+||+||+.++.+|.... ..+..++|++.+... +|++||
T Consensus 9 ~~~aDP~-v~~~~~~yY~~~tt~~~-~~g~~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAPev~~~-~G~yyl 85 (322)
T d2exha2 9 GFHPDPS-ICRVGDDYYIAVSTFEW-FPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSYS-DGKFWL 85 (322)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE-ESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEEEE-TTEEEE
T ss_pred CCCCCCE-EEEECCEEEEEEcCCCC-CCCcEEEECCCcCCcEEcccccccccccccCCCcccCCcccceEEEE-CCEEEE
Confidence 6678996 78899999999874311 12355689999999999887764322 234567999998874 999999
Q ss_pred EEeeecCC----CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecCC---
Q 008686 133 LYTGIDAG----NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIND--- 205 (557)
Q Consensus 133 ~YTg~~~~----~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~--- 205 (557)
||+..... ......++.+++.. ..|++ |+.. .....||.++ .+++|+.||+.+.....
T Consensus 86 yys~~~~~~~~~~~~~~~~~~sd~~~----gp~~~----~~~~------~~~~~dp~~f-~d~dG~~Yl~~~~~~~~~~~ 150 (322)
T d2exha2 86 IYTDVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYL------NSSGFDPSLF-HDEDGRKYLVNMYWDHRVDH 150 (322)
T ss_dssp EEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEEC------CCSCSCCEEE-ECTTSCEEEEEEEECCCTTS
T ss_pred EEEeecccCCCccccceEEEecCCCC----CCccc----ceEe------cCCCCCCCeE-EEcCCCEEEEecccCCccCc
Confidence 99976542 12334566665542 23443 3332 1245799854 44789999998765421
Q ss_pred --ccEEEEEEeCCCCCCEEccccc--ccCCCCCceeecceEEecCCCCCCeeecccCCceeEEEEEeecC
Q 008686 206 --TGLAILYRSKDFVNWTKAEQSL--YSTNQSGMWECPDFFPVSTKSPKGVDTSVIGPNIKHVLKVSLSN 271 (557)
Q Consensus 206 --~G~i~ly~S~Dl~~W~~~~~~~--~~~~~~~~~ECPdlf~l~~~g~~~~~~~~~~~~~~~vl~~s~~~ 271 (557)
...+.+. ..+...|+..+.+. .........|.|.+|+.+ | +++|++|...
T Consensus 151 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~s~~~ 204 (322)
T d2exha2 151 HPFYGIVLQ-EYSVEQKKLVGEPKIIFKGTDLRITEGPHLYKIN--G-------------YYYLLTAEGG 204 (322)
T ss_dssp CSEEEEEEE-EEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CCccceEEe-eecCcCCeECCCcEEEEEecCCCcccCcEEEEEC--C-------------EEEEEEeCCC
Confidence 1122222 23344566665432 222345578999999987 6 8888888643
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.20 E-value=8.4e-11 Score=118.83 Aligned_cols=123 Identities=13% Similarity=0.164 Sum_probs=94.4
Q ss_pred eCCCCcceec-CCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEe
Q 008686 93 STDMVNWTPH-DAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMV 171 (557)
Q Consensus 93 S~DlvhW~~~-~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~ 171 (557)
|++++ |++. -++|.|...++..+||.+.|+.. +|+++|+|.+.+..+...+++|+|+|+ +||+|.+ .|++.
T Consensus 21 ~~~~~-~R~~~NPil~~~~~~~~~~vfNp~~i~~-~g~~~ll~r~~~~~~~~~ig~A~S~DG-----i~w~~~~-~pv~~ 92 (327)
T d1vkda_ 21 YTGPV-WRYSKNPIIGRNPVPKGARVFNSAVVPY-NGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQW 92 (327)
T ss_dssp CCSSE-EECTTCCSBCBSCSTTEEEEEEEEEEEE-TTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCE
T ss_pred CCCCc-eecCCCccccCCCCcchhceeccEEEEE-CCEEEEEEEecCCCCceEEEEEEcCCc-----cCCEeCC-CCeec
Confidence 34443 4433 25688887677788999999885 999999999887777888999999996 7999875 57774
Q ss_pred cCC---CCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCCCCEEcccc
Q 008686 172 PAD---QIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFVNWTKAEQS 226 (557)
Q Consensus 172 ~p~---~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~ 226 (557)
+.. .++...++||.|++. +++|||++.+.. ...++.+++|+|+++|++.+..
T Consensus 93 p~~~~~~~~~~gv~DPrv~~~--~d~yym~yt~~~-~~~~i~lA~S~D~~~w~k~g~~ 147 (327)
T d1vkda_ 93 VDVNGEPFQPSYAYDPRVVKI--EDTYYITFCTDD-HGPTIGVGMTKDFKTFVRLPNA 147 (327)
T ss_dssp ECTTSCBCCCSSEEEEEEEEE--TTEEEEEEEEES-SSEEEEEEEESSSSSEEEECCS
T ss_pred CCCCCcccccCcEEcceEEEE--CCEEEEEEEecC-CCcEEEEEEecCcchheecCCc
Confidence 322 245668899997655 678999998764 3347899999999999998743
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=98.21 E-value=9.6e-06 Score=79.17 Aligned_cols=142 Identities=16% Similarity=0.213 Sum_probs=87.8
Q ss_pred eEEECCEEEEEEEEe--cCCCeEEEEEEeCCCCc--ceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecCCCc
Q 008686 67 PMIYKGIYHFFYQYK--LWDTVVWGHSTSTDMVN--WTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDAGNK 142 (557)
Q Consensus 67 ~~~~~G~YHlfyq~~--~~g~~~Wgha~S~Dlvh--W~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~~~~ 142 (557)
+++++|+|||||... ..+....++|+|+|... |++.+..+.+....+ ....+++++.++||+.||+|.....
T Consensus 76 v~~~~g~yylyy~~~~~~~~~~~i~~a~s~~~~~Gpw~~~~~~~~~~~~~~-~~~iDp~vf~D~dG~~Y~~~~~~~~--- 151 (291)
T d1uv4a1 76 IQYYNGKYWLYYSVSSFGSNTSAIGLASSTSISSGGWKDEGLVIRSTSSNN-YNAIDPELTFDKDGNPWLAFGSFWS--- 151 (291)
T ss_dssp EEEETTEEEEEEEECCTTCSCEEEEEEEESCTTTTCCEEEEEEEEECTTSS-SCCCSCEEEECTTSCEEEEECBSTT---
T ss_pred EEEECCEEEEEEEecCCCCCcceEEEEEeCCCCCCCCCcCccccccccCCC-CCccCceEEEecCCcEEEEecccCC---
Confidence 788999999999987 33468899999999765 998765443333222 3346789988778999999965321
Q ss_pred ceEEEEEE-cCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeecC----C-ccEEEEEEeCC
Q 008686 143 QVQNLAVP-KNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKIN----D-TGLAILYRSKD 216 (557)
Q Consensus 143 ~~q~lA~s-~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~----~-~G~i~ly~S~D 216 (557)
.+.++.. .+. ...... ...+...+. ....+.-|.+ ++ .+|+|||++++..- . .=++.+++|++
T Consensus 152 -~i~i~~l~~~~-----~~~~g~-~~~i~~~~~--~~~~~EgP~i-~k-~~g~Yyl~~S~~~~~~~~~~~y~v~~~~s~~ 220 (291)
T d1uv4a1 152 -GIKLTKLDKST-----MKPTGS-LYSIAARPN--NGGALEAPTL-TY-QNGYYYLMVSFDKCCDGVNSTYKIAYGRSKS 220 (291)
T ss_dssp -CEEEEEECTTT-----CSEEEE-EEEEECCTT--TTTCEEEEEE-EE-ETTEEEEEEEEECSSSSSCCEEEEEEEEESS
T ss_pred -ceEEEeecccc-----ccCcCc-eeEEEecCC--CCccccccEE-EE-ECCEEEEEEecCcccCCCCCCceeEEEEcCC
Confidence 2333322 221 111110 112222221 1234467885 45 58999999987541 1 12578899998
Q ss_pred CCC-CEEc
Q 008686 217 FVN-WTKA 223 (557)
Q Consensus 217 l~~-W~~~ 223 (557)
+.. |+..
T Consensus 221 ~~GP~~~~ 228 (291)
T d1uv4a1 221 ITGPYLDK 228 (291)
T ss_dssp TTCCCBCT
T ss_pred CCCCCccC
Confidence 865 7543
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=98.01 E-value=2.1e-05 Score=76.79 Aligned_cols=137 Identities=9% Similarity=-0.014 Sum_probs=97.5
Q ss_pred CCcceEEECCEEEEEEEEe---cCCCeEEEEEEeCCCCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecC
Q 008686 63 DPNGPMIYKGIYHFFYQYK---LWDTVVWGHSTSTDMVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDA 139 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~---~~g~~~Wgha~S~DlvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (557)
+|..++.++|+|||+++.- .|...+.+.+.+++..+|+..+. | . .|+..+.+... +|++++-||...+
T Consensus 31 N~~apf~~~Gk~~l~~RvE~rd~~s~s~v~lf~~~g~~~f~~~~~---p--~---~glEDPrvt~i-~g~lv~~~t~~~~ 101 (310)
T d2b4wa1 31 NCSVPFSYKGKTHIYGRVEKRDIWAASHVRLFEETGKDEFTAVPE---L--S---WELEDPYIAKI-NNEMIFGGTRVRK 101 (310)
T ss_dssp SCCCCEEETTEEEEEEEEECTTCSSCCEEEEEEEEETTEEEECTT---C--C---BSCEEEEEEEE-TTEEEEEEEEEC-
T ss_pred cCCcEEEECCEEEEEEEEEccCcceEEEEEEEEecCCcceEECCc---c--c---ccCCCCCEEeE-CCEEEEEEEEecC
Confidence 5767788999999999988 56678888889999999997653 1 2 27888998885 8999999998875
Q ss_pred CCcceEEEEEEcCCCCCccceeecCCCCceEe-cCCCCCCCCccCCeEEEecCCCeEEEEEeeecCCccEEEEEEeCCCC
Q 008686 140 GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMV-PADQIDPGSFRDPTTAWIGPDKIWRVIIGSKINDTGLAILYRSKDFV 218 (557)
Q Consensus 140 ~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~-~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~~~~G~i~ly~S~Dl~ 218 (557)
. ....++|.+.+ +++|.+ ..|++. .|++ .+|-. +..-.+|+|.|+.--+..+.|.|.+..++||.
T Consensus 102 ~-~~~~~~~~t~~-----~r~~~~--~l~~f~~gp~~-----~Kdi~-L~e~~dGKy~~ftRP~~g~~g~Ig~~~~d~l~ 167 (310)
T d2b4wa1 102 N-GNAILSYYGYF-----YRGTPD--ELTYFTRGPGC-----MKDIR-VLQLQDGRLGVFSRPRVGRKASIGFVILNSID 167 (310)
T ss_dssp -----CCCEEEEE-----EEEETT--EEEEEEECCTT-----CCCCE-EEECTTSCEEEEECCCC---CCEEEEEESCGG
T ss_pred C-CCcceEEEeee-----eecchh--cCceeecCCCc-----cccEE-eEEeeCCEEEEEEccccCCCCeeEEEEeCChh
Confidence 3 34455676665 467765 356664 3332 25554 33436899999987665567789999999999
Q ss_pred CCEE
Q 008686 219 NWTK 222 (557)
Q Consensus 219 ~W~~ 222 (557)
+|+.
T Consensus 168 ~~t~ 171 (310)
T d2b4wa1 168 ELGA 171 (310)
T ss_dssp GCSH
T ss_pred hCCH
Confidence 9974
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.93 E-value=6e-05 Score=73.79 Aligned_cols=122 Identities=10% Similarity=0.025 Sum_probs=85.6
Q ss_pred EEECCEEEEEEEEe-----cCC-CeEEEEEEeCCCCcceec--CCCCCCCCCcCCCceEeeeEEEccCCeEEEEEeeecC
Q 008686 68 MIYKGIYHFFYQYK-----LWD-TVVWGHSTSTDMVNWTPH--DAAIYPSQPFDANSCWSGSVTILPGGNPAVLYTGIDA 139 (557)
Q Consensus 68 ~~~~G~YHlfyq~~-----~~g-~~~Wgha~S~DlvhW~~~--~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~YTg~~~ 139 (557)
+..+|++++||..+ ..+ .....+|+|+|+.+|++. .++|.+.......+.-.+.|.. ++|+++|++.+...
T Consensus 79 v~~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg~~w~k~~~npvi~~~~~~~~~~fRDP~V~~-~~g~w~M~~g~~~~ 157 (294)
T d1uypa2 79 VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNR-SNGEWRMVLGSGKD 157 (294)
T ss_dssp EEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCSCSSTTEEEEEEEEEEE-ETTEEEEEEEEEET
T ss_pred EecCCeEEEEEEEeeCCCCCCcceeeeEEEECCCCCceEeecCCceecCCCccCccccCCCcccc-cCCEEEEEEEeeec
Confidence 45799999999877 112 456788999999999986 3455544333334567788876 58999999877655
Q ss_pred CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 008686 140 GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSK 202 (557)
Q Consensus 140 ~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~ 202 (557)
++.....+..|+| |++|+.. +++...+.. ..+.-|- ++. -+++|+|+++..
T Consensus 158 ~~~G~i~ly~S~D-----l~~W~~~--g~l~~~~~~---~~~ECPd-lf~-l~~~~vl~~s~~ 208 (294)
T d1uypa2 158 EKIGRVLLYTSDD-----LFHWKYE--GAIFEDETT---KEIECPD-LVR-IGEKDILIYSIT 208 (294)
T ss_dssp TTEEEEEEEEESS-----SSSEEEE--EEEEEETTC---SCEEEEE-EEE-ETTEEEEEEEET
T ss_pred CCccEEEEEEcCC-----ccceeEe--ccceeCCCC---Cceeece-EEE-eCCeeEEEEEec
Confidence 5555667788887 5899873 577654332 3567887 444 578999998764
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=97.57 E-value=0.0017 Score=62.80 Aligned_cols=153 Identities=12% Similarity=0.114 Sum_probs=84.6
Q ss_pred CCcceEEECCEEEEEEEEe--cCCCeEEEEEEeCC------CCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEEEE
Q 008686 63 DPNGPMIYKGIYHFFYQYK--LWDTVVWGHSTSTD------MVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAVLY 134 (557)
Q Consensus 63 DPnG~~~~~G~YHlfyq~~--~~g~~~Wgha~S~D------lvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l~Y 134 (557)
-| -+++.+|+|||||... ..+....+-++++. ..+|++.+..+......+.....+++++.++||+.|++|
T Consensus 66 AP-~v~~~~g~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDp~v~~d~dG~~Yl~~ 144 (318)
T d1gyha_ 66 AP-DIYQHKGLFYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHGQVWMSF 144 (318)
T ss_dssp EE-EEEEETTEEEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTSCEEEEE
T ss_pred CC-EEEEEcCceEEEEEEecCCCcccceeEEEEeccCCCccccccccCceecccCCCCCCCceEccceEeecCCcEEEec
Confidence 35 4788999999999988 33344455555432 468988765543333222233456788888789999998
Q ss_pred eeecCCCcceEEEEEEcCC-C----CCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-C----
Q 008686 135 TGIDAGNKQVQNLAVPKNL-S----DPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-N---- 204 (557)
Q Consensus 135 Tg~~~~~~~~q~lA~s~d~-~----d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~---- 204 (557)
.+... .+.++...+. . ........+. ..+++..........+..|.+ ++ .+|+|||++.+.. .
T Consensus 145 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~EgP~i-~k-~~g~yyl~yS~~~~~~~~~ 217 (318)
T d1gyha_ 145 GSFWG----GLKLFKLNDDLTRPAEPQEWHSIAKL-ERSVLMDDSQAGSAQIEAPFI-LR-KGDYYYLFASWGLCCRKGD 217 (318)
T ss_dssp CBSTT----CEEEEEBCTTSSSBCSSCCEEEEECC-CCCTTSCTTSCCSCCEEEEEE-EE-ETTEEEEEEEESCCSCGGG
T ss_pred cCCCC----CeeeEecCccceeecccccccccccc-ccceeeccCCCCCceeecCEE-EE-ECCEEEEEEecCCCCCCCc
Confidence 75432 1222222111 0 0000111111 122222222223345578885 45 5889999987643 1
Q ss_pred CccEEEEEEeCCCC-CCEEc
Q 008686 205 DTGLAILYRSKDFV-NWTKA 223 (557)
Q Consensus 205 ~~G~i~ly~S~Dl~-~W~~~ 223 (557)
....+.+++|+++. -|+..
T Consensus 218 ~~y~~~~~~s~~~~Gp~~~~ 237 (318)
T d1gyha_ 218 STYHLVVGRSKQVTGPYLDK 237 (318)
T ss_dssp CCCEEEEEEESSTTSCCBCT
T ss_pred ccceeeeecccCCCCCcccC
Confidence 22367888998876 35543
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=97.54 E-value=0.00064 Score=66.36 Aligned_cols=148 Identities=12% Similarity=0.068 Sum_probs=84.6
Q ss_pred CCccCCcceEEECCEEEEEEEEe-c----CCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYK-L----WDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~-~----~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l 132 (557)
+++.-| -+.+++|+|||||... . ......+.++|+|.. .|++... + . .....++++.++||+.||
T Consensus 69 ~~~WAP-~v~~~~G~~ylyy~~~~~~~~~~~~~~~~~~~a~~p~gp~~~~~~-~--~-----~~~iDp~~f~D~dG~~Yl 139 (317)
T d1yrza2 69 GGIWAP-CLSYHDGTFYLIYTDVKQWHGAFKDAHNYLVTAQNIEGPWSDPIY-L--N-----SSGFDPSLFHDDDGRKWL 139 (317)
T ss_dssp CEECSC-EEEEETTEEEEEEEEEEECSSSCCEEEEEEEEESSSSSCCCCCEE-C--C-----CSCSCCEEEECTTSCEEE
T ss_pred ceeecc-eEEEECCEEEEEEEEeccCCCCcccceEEEEecCCCCCCccceee-e--c-----CCccCCcEEEecCCCEEE
Confidence 344557 4788999999999876 1 224566778888865 6765322 1 1 112457888888999999
Q ss_pred EEeeecCC--CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCccEE
Q 008686 133 LYTGIDAG--NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDTGLA 209 (557)
Q Consensus 133 ~YTg~~~~--~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~G~i 209 (557)
+|.+.... ......+.......+ .++-. ..+... ..+.+.....-|++ ++ .+|+|||++.+.. ...-++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~-~~~~~~~~~Egp~i-~k-~~g~yyl~~s~~~~~~~y~v 211 (317)
T d1yrza2 140 VNMIWDYRKGNHPFAGIILQEYSEA----EQKLV-GPVKNI-YKGTDIQLTEGPHL-YK-KDGYYYLLVAEGGTEYEHAA 211 (317)
T ss_dssp EEEEECCCTTSCSEEEEEEEEEETT----TTEEE-EEEEEE-ECCCTTCCCEEEEE-EE-ETTEEEEEEEESCSSTTCEE
T ss_pred EEeccCcCCCCccccceeeeecCcc----cCeEc-CCceEE-EeccCCCcccCceE-EE-ECCEEEEEEccCCCCCcceE
Confidence 99876532 222223332211100 01110 011111 11112234578885 55 5889999987654 223367
Q ss_pred EEEEeCCCC-CCEEc
Q 008686 210 ILYRSKDFV-NWTKA 223 (557)
Q Consensus 210 ~ly~S~Dl~-~W~~~ 223 (557)
.+++|+++. .|+..
T Consensus 212 ~~~~s~~~~Gp~~~~ 226 (317)
T d1yrza2 212 TLARSQSIDGPYETD 226 (317)
T ss_dssp EEEEESSTTCCCEEC
T ss_pred EEEEECCCCCccccC
Confidence 889999875 66654
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=97.39 E-value=0.001 Score=64.62 Aligned_cols=148 Identities=18% Similarity=0.248 Sum_probs=86.7
Q ss_pred ccCCcceEEECCEEEEEEEEe--cCCCeEEEEEEeC-----C-CCcceecCCCCCCCCCcCCCceEeeeEEEccCCeEEE
Q 008686 61 MNDPNGPMIYKGIYHFFYQYK--LWDTVVWGHSTST-----D-MVNWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 61 ~nDPnG~~~~~G~YHlfyq~~--~~g~~~Wgha~S~-----D-lvhW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l 132 (557)
+.-| .+++.+|+|||||... ..+....+.+++. + ...|++.++.+.+... +......++++.++||+.++
T Consensus 82 ~WAP-~v~~~~g~yyl~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~iD~~~f~d~dG~~y~ 159 (312)
T d1wl7a1 82 LWAP-DICFYNGIYYLYYSVSTFGKNTSVIGLATNRTLDPRDPDYEWKDMGPVIHSTAS-DNYNAIDPNVVFDQEGQPWL 159 (312)
T ss_dssp EEEE-EEEEETTEEEEEEEECCTTCCCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTT-SSSCCCSCEEEECTTSCEEE
T ss_pred eEcc-eEEEeCCEEEEEEEeecCCcccceeeEEEEecccCCCCccccccccceecCCCC-CCCCcCCCceeEccCCcEEE
Confidence 3445 4788999999999988 3445556666533 2 2466666544433322 22345677888888999999
Q ss_pred EEeeecCCCcceEEEEE-EcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-----CCc
Q 008686 133 LYTGIDAGNKQVQNLAV-PKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-----NDT 206 (557)
Q Consensus 133 ~YTg~~~~~~~~q~lA~-s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-----~~~ 206 (557)
+|.+... ...++. +.|. ..... +...+.....+.+..-+.-|++ ++ .+|+|||++.+.. ...
T Consensus 160 ~~~~~~~----~i~~~~l~~d~-----~~~~~-~~~~i~~~~~~~~~~~~EgP~v-~k-~~g~yYl~ys~~~~~~~~~~~ 227 (312)
T d1wl7a1 160 SFGSFWS----GIQLIQLDTET-----MKPAA-QAELLTIASRGEEPNAIEAPFI-VC-RNGYYYLFVSFDFCCRGIEST 227 (312)
T ss_dssp EECBSTT----CEEEEEBCTTT-----CSBCT-TCCCEEEECCSSSSCCEEEEEE-EE-ETTEEEEEEEESCCSSGGGCC
T ss_pred eecCCCC----ceeEEEEcCcC-----CcCcC-CceEEEecccCCCCCcccccEE-EE-ECCcEEEEEecCCCcCCCCCC
Confidence 9875431 223332 2221 11111 1234444433334445678985 45 5899999987643 123
Q ss_pred cEEEEEEeCCCCC-CEE
Q 008686 207 GLAILYRSKDFVN-WTK 222 (557)
Q Consensus 207 G~i~ly~S~Dl~~-W~~ 222 (557)
.++.+++|+++.. |+.
T Consensus 228 ~~~~~a~s~~~~GP~~~ 244 (312)
T d1wl7a1 228 YKIAVGRSKDITGPYVD 244 (312)
T ss_dssp CEEEEEEESSTTCCCBC
T ss_pred ceEEEEecCCCCccccc
Confidence 4788999988753 443
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=97.31 E-value=0.0021 Score=62.80 Aligned_cols=148 Identities=11% Similarity=0.097 Sum_probs=82.9
Q ss_pred CCCccCCcceEEECCEEEEEEEEe-----cCCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEE
Q 008686 58 SSWMNDPNGPMIYKGIYHFFYQYK-----LWDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPA 131 (557)
Q Consensus 58 ~gw~nDPnG~~~~~G~YHlfyq~~-----~~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~ 131 (557)
.+.+.-|. +.+++|+|||||... .+...+...++|++.. .|++.. .+.. ....+++++++||+.|
T Consensus 68 ~~~~WAPe-v~~~~G~yylyys~~~~~~~~~~~~~~~~~~sd~~~gp~~~~~-~~~~-------~~~dp~~f~d~dG~~Y 138 (322)
T d2exha2 68 SGGVWAPH-LSYSDGKFWLIYTDVKVVEGQWKDGHNYLVTCDTIDGAWSDPI-YLNS-------SGFDPSLFHDEDGRKY 138 (322)
T ss_dssp TCBBCSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCCCE-ECCC-------SCSCCEEEECTTSCEE
T ss_pred cCCcccce-EEEECCEEEEEEEeecccCCCccccceEEEecCCCCCCcccce-EecC-------CCCCCCeEEEcCCCEE
Confidence 34466784 888999999999876 1223444556666653 565422 2211 1245667777799999
Q ss_pred EEEeeecCC--CcceEEEEEEcCCCCCccceeecCCCCceEe-cCCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCcc
Q 008686 132 VLYTGIDAG--NKQVQNLAVPKNLSDPYLKEWIKPPENPLMV-PADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDTG 207 (557)
Q Consensus 132 l~YTg~~~~--~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~-~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~G 207 (557)
|+|.+.... ......+...+... ..++.. ..|... ... +...+.-|++ ++ .+|.|||++.... ...-
T Consensus 139 l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~--~~~~~Egp~i-~k-~~g~YYl~~s~~~~~~~y 209 (322)
T d2exha2 139 LVNMYWDHRVDHHPFYGIVLQEYSV----EQKKLV-GEPKIIFKGT--DLRITEGPHL-YK-INGYYYLLTAEGGTRYNH 209 (322)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEET----TTTEEE-EEEEEEECCC--TTCCCEEEEE-EE-ETTEEEEEEEESCSSTTC
T ss_pred EEecccCCccCcCCccceEEeeecC----cCCeEC-CCcEEEEEec--CCCcccCcEE-EE-ECCEEEEEEeCCCCCCCc
Confidence 998776432 11222333322111 112221 123321 111 2235678885 45 5789999987643 2233
Q ss_pred EEEEEEeCCCC-CCEEc
Q 008686 208 LAILYRSKDFV-NWTKA 223 (557)
Q Consensus 208 ~i~ly~S~Dl~-~W~~~ 223 (557)
++.+++|+++. -|+..
T Consensus 210 ~v~~~rS~~~~GP~~~~ 226 (322)
T d2exha2 210 AATIARSTSLYGPYEVH 226 (322)
T ss_dssp EEEEEEESSTTCCCEEC
T ss_pred eEEEEEeCCCCcccccC
Confidence 78899999875 46543
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=97.25 E-value=0.0029 Score=61.41 Aligned_cols=145 Identities=12% Similarity=0.067 Sum_probs=84.9
Q ss_pred CCccCCcceEEECCEEEEEEEEe-----cCCCeEEEEEEeCCCC-cceecCCCCCCCCCcCCCceEeeeEEEccCCeEEE
Q 008686 59 SWMNDPNGPMIYKGIYHFFYQYK-----LWDTVVWGHSTSTDMV-NWTPHDAAIYPSQPFDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 59 gw~nDPnG~~~~~G~YHlfyq~~-----~~g~~~Wgha~S~Dlv-hW~~~~~aL~P~~~~d~~gv~SGsav~~~dg~~~l 132 (557)
+-+.-| -+++.+|+|||||... .+.....+.++|++.. .|++.... +.. ...++++.++||+.++
T Consensus 68 ~~~WAP-~v~~~~g~yylyys~~~~~~~~~~~~~~~~a~a~~p~Gp~~~~~~~--~~~------~~D~~~~~d~dg~~~~ 138 (321)
T d1y7ba2 68 GGIWAP-DLSYHDGKFWLIYTDVKVTDGMWKDCHNYLTTCESVDGVWSDPITL--NGS------GFDASLFHDNDGKKYL 138 (321)
T ss_dssp CEECSC-EEEEETTEEEEEEEEESCCSSSCCCEEEEEEEESSTTSCCCCCEEC--CCS------CSCCEEEECTTSCEEE
T ss_pred CcccCc-eEEEECCEEEEEEEeeccCCCCccceeeEeeecCCCCCCcccceee--ccc------ccCCcEEEEcCCCEEE
Confidence 336678 4888999999999987 2336788999999875 66654321 111 2456777777899999
Q ss_pred EEeeecCC----CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-CCcc
Q 008686 133 LYTGIDAG----NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-NDTG 207 (557)
Q Consensus 133 ~YTg~~~~----~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-~~~G 207 (557)
+|.+.... ......++...+. ..+.... ...++.... .....-|++ ++ .+|.|||+.+... ...-
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~---~~~~Egp~v-~k-~~g~yyl~~s~~~~~~~y 208 (321)
T d1y7ba2 139 VNMYWDQRTYNHNFYGIVLQEYSDK----EKKLIGK-AKIIYKGTD---IKYTEGPHI-YH-IGDYYYLFTAEGGTTYEH 208 (321)
T ss_dssp EEEEECCCTTSCSEEEEEEEEEETT----TTEEEEE-EEEEECCCT---TCCCEEEEE-EE-ETTEEEEEEEESCSSTTC
T ss_pred EEeccCCCccccCccceeeEeeCCC----cceEcCC-ceEEeeccC---CCccccceE-EE-ECCEEEEEEcCCCCCCCc
Confidence 98765432 1122223322221 1222221 112222221 224578885 55 5788888876543 2233
Q ss_pred EEEEEEeCCCC-CCEE
Q 008686 208 LAILYRSKDFV-NWTK 222 (557)
Q Consensus 208 ~i~ly~S~Dl~-~W~~ 222 (557)
.+.+++|+++. -|+.
T Consensus 209 ~~~~~rs~~~~Gp~~~ 224 (321)
T d1y7ba2 209 SETVARSKNIDGPYEI 224 (321)
T ss_dssp EEEEEEESSTTCCCEE
T ss_pred ceEEEEEcccCCcccc
Confidence 68899998875 3544
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=96.97 E-value=0.0063 Score=62.18 Aligned_cols=142 Identities=10% Similarity=0.087 Sum_probs=85.7
Q ss_pred ECCEEEEEEEEe---cCCCeEE----EE-EEeCCCCcce---ecCCCCCCCCCc----------------CCCceEeeeE
Q 008686 70 YKGIYHFFYQYK---LWDTVVW----GH-STSTDMVNWT---PHDAAIYPSQPF----------------DANSCWSGSV 122 (557)
Q Consensus 70 ~~G~YHlfyq~~---~~g~~~W----gh-a~S~DlvhW~---~~~~aL~P~~~~----------------d~~gv~SGsa 122 (557)
.||+++|||... ..+.... ++ +.|.+.+.|+ ..++.+.|+..+ +....-.+.+
T Consensus 138 ~DG~~~LfYTg~~~~~~~~q~i~~a~~~~~~d~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fRDP~v 217 (440)
T d1oyga_ 138 SDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHY 217 (440)
T ss_dssp TTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEEE
T ss_pred cCCeEEEEEEeccCCCCCcceEEEEEEEEeecCCcceeecccCCceeecCCCccceeeecccccCCCCCCCcccccCCce
Confidence 599999999976 2232222 33 3455556654 345667776532 1223557777
Q ss_pred EEccCCeEEEEEeeecCC--Cc---------------------------------------ceEEEEEEcCCCCCcccee
Q 008686 123 TILPGGNPAVLYTGIDAG--NK---------------------------------------QVQNLAVPKNLSDPYLKEW 161 (557)
Q Consensus 123 v~~~dg~~~l~YTg~~~~--~~---------------------------------------~~q~lA~s~d~~d~~l~~w 161 (557)
+.+ +|+.||++.|+... +. ..++|+...+ ++..|
T Consensus 218 ~~~-~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~----D~~~W 292 (440)
T d1oyga_ 218 VED-KGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELND----DYTLK 292 (440)
T ss_dssp EEE-TTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECT----TSSEE
T ss_pred eee-CCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCC----Ccccc
Confidence 764 89999999987531 00 1234444222 25789
Q ss_pred ecCCCCceEecCCCCCCCCccCCeEEEecCCCeEEEEEeeec-----C---Ccc-EEEEEEeCCCC-CCEE
Q 008686 162 IKPPENPLMVPADQIDPGSFRDPTTAWIGPDKIWRVIIGSKI-----N---DTG-LAILYRSKDFV-NWTK 222 (557)
Q Consensus 162 ~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g~~~m~~ga~~-----~---~~G-~i~ly~S~Dl~-~W~~ 222 (557)
+.. .|++..... ...+..|.++ + .+|+|||+..++. + ..+ .+..|.|+.+. .|+-
T Consensus 293 e~~--~pLl~a~~v--~d~~ErP~I~-~-~nGKYYLFtss~~~~~a~~~~~~~~~~~~g~Vsdsl~Gpy~P 357 (440)
T d1oyga_ 293 KVM--KPLIASNTV--TDEIERANVF-K-MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKP 357 (440)
T ss_dssp EEE--EEEEECTTT--CSCCEEEEEE-E-ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCEE
T ss_pred eec--CcceeccCC--CCeEECCEEE-E-ECCEEEEEEecccccccCCCcCCCCceEEEEECCCCCCCCee
Confidence 975 488865432 3457889854 4 5899999887653 1 112 45677787765 4653
|
| >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Micromonospora sialidase, N-terminal domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=92.56 E-value=0.4 Score=44.93 Aligned_cols=102 Identities=13% Similarity=0.100 Sum_probs=63.2
Q ss_pred eE-eeeEEEccCCeEEEEEeeecC----CCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecC
Q 008686 117 CW-SGSVTILPGGNPAVLYTGIDA----GNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGP 191 (557)
Q Consensus 117 v~-SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~ 191 (557)
+| .++++..+||.++++|.+... .+...+.+..|+|+| ++|++. ..|...+.......+.+|.++....
T Consensus 20 ~~RiPslv~~~~G~lla~~~~r~~~~~d~~~~~i~~~rS~D~G----~TWs~~--~~v~~~~~~~~~~~~~~~~~v~~~~ 93 (356)
T d1w8oa3 20 NYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ--QVVSAGQTTAPIKGFSDPSYLVDRE 93 (356)
T ss_dssp CEEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC--EEEECCBCSSSCBEEEEEEEEECTT
T ss_pred eeEeCEEEEECCCCEEEEEeeeeCCCCCCCCceEEEEEccCCC----CCCCCC--EEeecCCCCCcccccccceEEEeCC
Confidence 56 577777779999999987532 134556778899986 899862 2333333332345567888666655
Q ss_pred CCeEEEEEeeecC---------------CccEEEEEEeCC-CCCCEEcc
Q 008686 192 DKIWRVIIGSKIN---------------DTGLAILYRSKD-FVNWTKAE 224 (557)
Q Consensus 192 ~g~~~m~~ga~~~---------------~~G~i~ly~S~D-l~~W~~~~ 224 (557)
+|.-++.+..... ....+.+++|+| ...|....
T Consensus 94 ~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~ 142 (356)
T d1w8oa3 94 TGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRT 142 (356)
T ss_dssp TCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEE
T ss_pred CCeEEEEEeeeccCCcccccccCCCCCCcEEEEEEEecCCccccccccc
Confidence 6765444432210 012567888865 58898754
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=90.73 E-value=0.074 Score=51.06 Aligned_cols=97 Identities=10% Similarity=0.008 Sum_probs=59.8
Q ss_pred CceEeeeEEEccCCeEEEEEeeecCCCcceEEEEE-EcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecCCC
Q 008686 115 NSCWSGSVTILPGGNPAVLYTGIDAGNKQVQNLAV-PKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGPDK 193 (557)
Q Consensus 115 ~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~-s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~~g 193 (557)
..||..+|....+|+++|++--..++......++. +..++ .+|+..+ .|+. ...||.|.+. +|
T Consensus 27 ~DVyN~~apf~~~Gk~~l~~RvE~rd~~s~s~v~lf~~~g~----~~f~~~~-~p~~---------glEDPrvt~i--~g 90 (310)
T d2b4wa1 27 YDVYNCSVPFSYKGKTHIYGRVEKRDIWAASHVRLFEETGK----DEFTAVP-ELSW---------ELEDPYIAKI--NN 90 (310)
T ss_dssp CEEESCCCCEEETTEEEEEEEEECTTCSSCCEEEEEEEEET----TEEEECT-TCCB---------SCEEEEEEEE--TT
T ss_pred cceecCCcEEEECCEEEEEEEEEccCcceEEEEEEEEecCC----cceEECC-cccc---------cCCCCCEEeE--CC
Confidence 44999998544589999999877665434334443 33332 5777654 4543 5679997664 68
Q ss_pred eEEEEEeeecCCccEEEEEEeCCCCCCEEccccc
Q 008686 194 IWRVIIGSKINDTGLAILYRSKDFVNWTKAEQSL 227 (557)
Q Consensus 194 ~~~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~ 227 (557)
+|+|-..+.....+.+.+|++.|++.|+..+..+
T Consensus 91 ~lv~~~t~~~~~~~~~~~~~t~~~r~~~~~l~~f 124 (310)
T d2b4wa1 91 EMIFGGTRVRKNGNAILSYYGYFYRGTPDELTYF 124 (310)
T ss_dssp EEEEEEEEEC-----CCCEEEEEEEEETTEEEEE
T ss_pred EEEEEEEEecCCCCcceEEEeeeeecchhcCcee
Confidence 8876544333344566788999988886544333
|
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=81.74 E-value=22 Score=33.51 Aligned_cols=119 Identities=17% Similarity=0.141 Sum_probs=66.3
Q ss_pred EEEEEEEEe-c------------CCCeEEEEEEeCC-CCcceec---CCCCCC-CCC--cCCCceEeeeEEEccCCeEEE
Q 008686 73 IYHFFYQYK-L------------WDTVVWGHSTSTD-MVNWTPH---DAAIYP-SQP--FDANSCWSGSVTILPGGNPAV 132 (557)
Q Consensus 73 ~YHlfyq~~-~------------~g~~~Wgha~S~D-lvhW~~~---~~aL~P-~~~--~d~~gv~SGsav~~~dg~~~l 132 (557)
..++||..+ . .+...-..|.|+| +++|++. .++|.. ... .+....-++.|+..+++.+++
T Consensus 104 ~l~~~YT~~~~~~~~~~~~~~~~~~~~~q~~A~s~d~g~~~~~~~~~npvi~~~~~~~~~~~~~fRDP~V~~~~~~~~~~ 183 (353)
T d1y4wa2 104 PLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQKWV 183 (353)
T ss_dssp CEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTTSSCEECTTTCCSBCSCCTTCGGGTTSEEEEEEEEETTTTEEE
T ss_pred eEEEEEeeeecccccccCcccccCCcEEEEEEEECCCCcceEEecCCCeEecCCCCCCcccccccCCCceEEECCCCEEE
Confidence 578899876 1 1223445677665 8999874 234432 222 233467889888754454444
Q ss_pred EEeeecCCCcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEe-c---CCCeEEEEEeee
Q 008686 133 LYTGIDAGNKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWI-G---PDKIWRVIIGSK 202 (557)
Q Consensus 133 ~YTg~~~~~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~-~---~~g~~~m~~ga~ 202 (557)
+=.+... .....|..|+| |.+|+.. +++..... ....+.-|-.+.- . .+.+|+|+.|..
T Consensus 184 ~~~~~~~--~g~v~ly~S~D-----l~~W~~~--g~l~~~~~--~g~~wECPdlf~l~~~~~~~~~~vl~~g~~ 246 (353)
T d1y4wa2 184 VVTSIAE--LHKLAIYTSDN-----LKDWKLV--SEFGPYNA--QGGVWECPGLVKLPLDSGNSTKWVITSGLN 246 (353)
T ss_dssp EEEEEGG--GTEEEEEEESS-----SSSCEEE--EEECCCSC--CSSEEEEEEEEEEEBTTSSCEEEEEEEEEE
T ss_pred EEEeecC--CCeEEEEecCC-----CCceEEe--ccccccCC--CCcceeeeEEEEeecCCCCceEEEEEeccc
Confidence 4333332 24567778877 4899874 35433221 1245677763322 1 234778777654
|
| >d3sila_ b.68.1.1 (A:) Salmonella sialidase {Salmonella typhimurium, strain lt2 [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Salmonella sialidase species: Salmonella typhimurium, strain lt2 [TaxId: 90371]
Probab=81.28 E-value=4 Score=38.80 Aligned_cols=75 Identities=12% Similarity=0.025 Sum_probs=46.6
Q ss_pred eE-eeeEEEccCCeEEEEEeeecCC----CcceEEEEEEcCCCCCccceeecCCCCceEecCCCCCCCCccCCeEEEecC
Q 008686 117 CW-SGSVTILPGGNPAVLYTGIDAG----NKQVQNLAVPKNLSDPYLKEWIKPPENPLMVPADQIDPGSFRDPTTAWIGP 191 (557)
Q Consensus 117 v~-SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~s~d~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~V~~~~~ 191 (557)
+| .++.+...+|.+++++.+.... +...+.++.|+|+| ++|++. ..|...+.......+.||..++...
T Consensus 32 ~yRiP~L~~~~~G~llA~~e~R~~~~~d~~~~div~~rS~DgG----kTWs~~--~~i~~~~~~~~~~~~~~p~~v~~~~ 105 (379)
T d3sila_ 32 YFRIPAMCTTSKGTIVVFADARHNTASDQSFIDTAAARSTDGG----KTWNKK--IAIYNDRVNSKLSRVMDPTCIVANI 105 (379)
T ss_dssp EEEEEEEEECTTCCEEEEEEEESSCSCSSSCEEEEEEEESSSS----SCCEEE--EEECCCCSCTTTCEEEEEEEEEEEE
T ss_pred eEeccEEEEECCCcEEEEEeeEECCCCCCCCceEEEEEecCCc----cCCCCC--EEccCCCCCccccccCCccEEEECC
Confidence 45 5777767799999999775431 22334566888876 899873 2333322222345677998666655
Q ss_pred CCeEEE
Q 008686 192 DKIWRV 197 (557)
Q Consensus 192 ~g~~~m 197 (557)
+|.-.+
T Consensus 106 ~g~~~~ 111 (379)
T d3sila_ 106 QGRETI 111 (379)
T ss_dssp TTEEEE
T ss_pred CCCEEE
Confidence 665543
|