Citrus Sinensis ID: 008699

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------

MGTSEAVLQVLSGANPLLFNSAKCSGNLDATFPSRFLYKYTKKRVSRYKRLFNCSSTLQSDLGLNWLKGLGYGLSGCREVNRLQLLSCKCQQAESVSGLTAEDGNGTWFVDSAKKLNLKSVANTPNILEFQDVQQFEQEKKSFTSNGAAGTTIDSVSKATVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQVSHGSIVGLYVFHFS

ccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccEEEccccccccccccccccccccccHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHccccccccccEEEEEccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEccccccccccEEEcccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHcccccccccHHHHHHccccccEEEEcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccEEcccccccccHHHHHccccccccccccccccHHHHHHHHHHHHHHHEEEEccc

ccHHHHHHHHHccccccccccccHccccccccccHHHHHHHccccccccEEEEcccccHcccccccccccccccccccEEcccEEEEEEccccccccccEcccccccEEEEcHEccccccccccccccEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHEEccccEEEEEEccccccccccccHEEHHccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccccccccccEEEcccccccHEEEcccccHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHHHccccccccEEEccccccHEcccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcEEcHHHHHHHHccccHcccccHHcccccccccccHHHHHHccccccEEEEccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccEEEccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHEEEcc

MGTSEAVLQVLSGanpllfnsakcsgnldatfpsrflyKYTKKRVSRYKRLFncsstlqsdlglnwlkglgyglsgcrevnrLQLLSckcqqaesvsgltaedgngtwfvdsakklnlksvantpnilefqDVQQFEQEKksftsngaagttidSVSKATVDCLEDEAWNLLRDSMVYycgspigtiaandptssnvlnydqvfiRDFIPSGIAFLLKGEYDIVRNFILHTLQlqswektmdchspgqglmpasfkvrtvpldgddsateevldpdfgeaaigrvapvdsgLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLadgfdmfptllvtdgscmidrrmgihghpLEIQALFYSALLCARemlapedgsADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRykteeysydavnkfniypdqippwlvewmpnkggylignlqpahmdfRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADmplkicypalegqewqiitgsdpkntpwsyhnagswptLLWQVSHGSIVGLYVFHFS

MGTSEAVLQVLSGANPLLFNSAKcsgnldatfpsrFLYKYTKKRVSRYKRLFNCSstlqsdlglNWLKGLGYGLSGCREVNRLQLLSCKCQQAESVSGLTAEDGNGTWFVDSAKKLNLKSVANTPNILEFQDVQQFEQEKKSftsngaagttidsvsKATVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQVSHGSIVGLYVFHFS

******VLQVLSGANPLLFNSAKCSGNLDATFPSRFLYKYTKKRVSRYKRLFNCSSTLQSDLGLNWLKGLGYGLSGCREVNRLQLLSCKCQQAESVSGLTAEDGNGTWFVDSAKKLNLKSVANTPNILEFQDV*****************TTIDSVSKATVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHS****LM**SFKVRT************VLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQVSHGSIVGLYVFHF*

****EAVLQVLSGANPLLFNSAKCSGNLDATFPSRFLYKYTKKRVSRYKRLFNCSSTLQ***********************************************************************************************************EAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQVSHGSIVGLYVFHFS

*****AVLQVLSGANPLLFNSAKCSGNLDATFPSRFLYKYTKKRVSRYKRLFNCSSTLQSDLGLNWLKGLGYGLSGCREVNRLQLLSCKCQQAESVSGLTAEDGNGTWFVDSAKKLNLKSVAN*PN***********************************DCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQVSHGSIVGLYVFHFS

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		557
399138444		650	neutral invertase [Litchi chinensis]	0.983	0.843	0.843	0.0
255582448		663	beta-fructofuranosidase, putative [Ricin	0.982	0.825	0.798	0.0
359486945		714	PREDICTED: uncharacterized protein LOC10	0.980	0.764	0.814	0.0
384371330		663	neutral/alkaline invertase [Manihot escu	0.982	0.825	0.791	0.0
356525551		652	PREDICTED: uncharacterized protein LOC10	0.980	0.837	0.763	0.0
449465541		638	PREDICTED: uncharacterized protein LOC10	0.955	0.833	0.766	0.0
356512768		652	PREDICTED: uncharacterized protein LOC10	0.983	0.840	0.753	0.0
359479382		639	PREDICTED: uncharacterized protein LOC10	0.958	0.835	0.751	0.0
357519691		645	Alkaline/neutral invertase [Medicago tru	0.971	0.838	0.742	0.0
255576365		634	beta-fructofuranosidase, putative [Ricin	0.949	0.834	0.700	0.0

>gi\|399138444\|gb\|AFP23358.1\| neutral invertase [Litchi chinensis]	Back alignment and taxonomy information

 Score =  962 bits (2487), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/548 (84%), Positives = 489/548 (89%)

Query: 1   MGTSEAVLQVLSGANPLLFNSAKCSGNLDATFPSRFLYKYTKKRVSRYKRLFNCSSTLQS 60
           MGTSE  LQ+LSGA   +F S  C  N++ T+PSR  YK  KKR   Y + + CSSTL S
Sbjct: 1   MGTSEMALQILSGAGRWVFTSDLCFCNVNCTYPSRLRYKCMKKRTFEYVKFWRCSSTLHS 60

Query: 61  DLGLNWLKGLGYGLSGCREVNRLQLLSCKCQQAESVSGLTAEDGNGTWFVDSAKKLNLKS 120
            +G   LKGL  G+ G    NRLQLLSCKCQQAESVSGLTAEDGN TWFVDSA +LN+  
Sbjct: 61  HIGSEQLKGLRCGVFGDTAANRLQLLSCKCQQAESVSGLTAEDGNRTWFVDSANELNING 120

Query: 121 VANTPNILEFQDVQQFEQEKKSFTSNGAAGTTIDSVSKATVDCLEDEAWNLLRDSMVYYC 180
             N  NILEF+ VQQFEQEKK  TSNG  GT  ++V KA+V+ +EDEAW+LLRDSMVYYC
Sbjct: 121 GTNATNILEFEGVQQFEQEKKGLTSNGVVGTGRETVHKASVNSIEDEAWDLLRDSMVYYC 180

Query: 181 GSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKT 240
           GSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKT
Sbjct: 181 GSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKT 240

Query: 241 MDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRA 300
           MDCHSPGQGLMPASFKV TVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRA
Sbjct: 241 MDCHSPGQGLMPASFKVCTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRA 300

Query: 301 YGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEI 360
           YGKCSGDL VQER+DVQTGIKMIL+LCLADGFDMFPTLLVTDGSCM+DRRMGIHGHPLEI
Sbjct: 301 YGKCSGDLSVQERVDVQTGIKMILRLCLADGFDMFPTLLVTDGSCMVDRRMGIHGHPLEI 360

Query: 361 QALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEE 420
           QALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEE
Sbjct: 361 QALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEE 420

Query: 421 YSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATR 480
           YSYDAVNKFNIYPDQI PWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGN+WSIV+ LAT 
Sbjct: 421 YSYDAVNKFNIYPDQISPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNLWSIVSSLATT 480

Query: 481 DQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLL 540
           DQSHAILDL++ KWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLL
Sbjct: 481 DQSHAILDLIDTKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLL 540

Query: 541 WQVSHGSI 548
           WQ++   I
Sbjct: 541 WQLTVACI 548

Source: Litchi chinensis

Species: Litchi chinensis

Genus: Litchi

Family: Sapindaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255582448\|ref\|XP_002532011.1\| beta-fructofuranosidase, putative [Ricinus communis] gi\|223528323\|gb\|EEF30366.1\| beta-fructofuranosidase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|359486945\|ref\|XP_002264960.2\| PREDICTED: uncharacterized protein LOC100248981 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|384371330\|gb\|AFH77954.1\| neutral/alkaline invertase [Manihot esculenta]	Back alignment and taxonomy information

>gi\|356525551\|ref\|XP_003531388.1\| PREDICTED: uncharacterized protein LOC100788719 [Glycine max]	Back alignment and taxonomy information

>gi\|449465541\|ref\|XP_004150486.1\| PREDICTED: uncharacterized protein LOC101217778 [Cucumis sativus] gi\|449516272\|ref\|XP_004165171.1\| PREDICTED: uncharacterized protein LOC101226610 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356512768\|ref\|XP_003525088.1\| PREDICTED: uncharacterized protein LOC100813457 [Glycine max]	Back alignment and taxonomy information

>gi\|359479382\|ref\|XP_003632264.1\| PREDICTED: uncharacterized protein LOC100854602 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|357519691\|ref\|XP_003630134.1\| Alkaline/neutral invertase [Medicago truncatula] gi\|355524156\|gb\|AET04610.1\| Alkaline/neutral invertase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|255576365\|ref\|XP_002529075.1\| beta-fructofuranosidase, putative [Ricinus communis] gi\|223531487\|gb\|EEF33319.1\| beta-fructofuranosidase, putative [Ricinus communis]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		557
TAIR\|locus:2171112		617	INV-E "alkaline/neutral invert	0.721	0.651	0.856	5.5e-196
TAIR\|locus:2027600		616	A/N-InvA "alkaline/neutral inv	0.675	0.610	0.785	1.7e-171
TAIR\|locus:2084329		664	A/N-InvC "alkaline/neutral inv	0.745	0.625	0.700	1.5e-168
TAIR\|locus:2074434		659	INVH "invertase H" [Arabidopsi	0.732	0.619	0.710	2.7e-164
TAIR\|locus:2014676		551	CINV1 "cytosolic invertase 1"	0.676	0.684	0.607	2.5e-129
TAIR\|locus:2133737		558	CINV2 "cytosolic invertase 2"	0.676	0.675	0.602	3.2e-129
TAIR\|locus:2116870		571	A/N-InvB "alkaline/neutral inv	0.675	0.658	0.586	2.1e-125
TAIR\|locus:2016064		499	A/N-InvF "alkaline/neutral inv	0.676	0.755	0.578	2.4e-122
TAIR\|locus:2199690		534	A/N-InvD "alkaline/neutral inv	0.676	0.705	0.573	5.1e-122

TAIR\|locus:2171112 INV-E "alkaline/neutral invertase E" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1898 (673.2 bits), Expect = 5.5e-196, P = 5.5e-196
 Identities = 345/403 (85%), Positives = 380/403 (94%)

Query:   146 NGAAGTTIDSVSKATVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFI 205
             NG+  +  ++ S  T   +EDEAW+LLR S+V+YCGSPIGTIAANDP S++VLNYDQVFI
Sbjct:   114 NGSVSSNGNAQSVGTKS-IEDEAWDLLRQSVVFYCGSPIGTIAANDPNSTSVLNYDQVFI 172

Query:   206 RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGD 265
             RDFIPSGIAFLLKGEYDIVRNFIL+TLQLQSWEKTMDCHSPGQGLMP SFKV+TVPLDGD
Sbjct:   173 RDFIPSGIAFLLKGEYDIVRNFILYTLQLQSWEKTMDCHSPGQGLMPCSFKVKTVPLDGD 232

Query:   266 DSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQTGIKMILK 325
             DS TEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKC+GDL VQER+DVQTGIKMILK
Sbjct:   233 DSMTEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCTGDLSVQERVDVQTGIKMILK 292

Query:   326 LCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLI 385
             LCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSAL+CAREML PEDGSADLI
Sbjct:   293 LCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALVCAREMLTPEDGSADLI 352

Query:   386 RALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMP 445
             RALNNRLVAL+FHIREYYW+DL+K+NEIYRY+TEEYSYDAVNKFNIYPDQIP WLV++MP
Sbjct:   353 RALNNRLVALNFHIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMP 412

Query:   446 NKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKI 505
             N+GGYLIGNLQPAHMDFRFF+LGN+WSIV+ LA+ DQSHAILD +EAKWA+LVADMPLKI
Sbjct:   413 NRGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLASNDQSHAILDFIEAKWAELVADMPLKI 472

Query:   506 CYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQVSHGSI 548
             CYPA+EG+EW+IITGSDPKNTPWSYHN G+WPTLLWQ++  SI
Sbjct:   473 CYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQLTVASI 515

GO:0003824 "catalytic activity" evidence=IEA

GO:0004564 "beta-fructofuranosidase activity" evidence=ISS

GO:0004575 "sucrose alpha-glucosidase activity" evidence=IDA;IMP

GO:0005982 "starch metabolic process" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0005987 "sucrose catabolic process" evidence=IDA

GO:0048825 "cotyledon development" evidence=IMP

TAIR\|locus:2027600 A/N-InvA "alkaline/neutral invertase A" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2084329 A/N-InvC "alkaline/neutral invertase C" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2074434 INVH "invertase H" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2014676 CINV1 "cytosolic invertase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2133737 CINV2 "cytosolic invertase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2116870 A/N-InvB "alkaline/neutral invertase B" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2016064 A/N-InvF "alkaline/neutral invertase F" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2199690 A/N-InvD "alkaline/neutral invertase D" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00034936001	SubName- Full=Chromosome chr13 scaffold_74, whole genome shotgun sequence; (651 aa)
		(Vitis vinifera)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		557
PLN02703		618	PLN02703, PLN02703, beta-fructofuranosidase	0.0
pfam12899		437	pfam12899, Glyco_hydro_100, Alkaline and neutral i	0.0
PLN03005		550	PLN03005, PLN03005, beta-fructofuranosidase	0.0
PLN02973		571	PLN02973, PLN02973, beta-fructofuranosidase	1e-170

>gnl\|CDD\|178306 PLN02703, PLN02703, beta-fructofuranosidase	Back alignment and domain information

 Score =  821 bits (2123), Expect = 0.0
 Identities = 372/556 (66%), Positives = 426/556 (76%), Gaps = 48/556 (8%)

Query: 1   MGTSEAVLQVLSGANPLLFNSAKCSGNLDATFPSRFLYK---YTKKRVS-----RYKRLF 52
           M  SE VL+V  G+     + +    +          +K   Y +K+V       Y  + 
Sbjct: 1   MAASETVLRVPLGS----LSQSCYLASFFVNSTPNLSFKPVSYNRKKVRCTNSHEYSSVS 56

Query: 53  NCSSTLQSDLGLNWLKGLGYGLSGCREVNRLQLLSCKCQQAESVSGLTAEDGNGTWFVDS 112
            C              G  +  + C +  +   + CKCQ+ +    + +     T     
Sbjct: 57  ACQDA----------DGSFHSSNECLKGKKFVQMRCKCQKHDVEESIRS-----TLLPSD 101

Query: 113 AKKLNLKSVANTPNILEFQDVQQFEQEKKSFTSNGAAGTTIDSVSKATVDCLEDEAWNLL 172
             K +L  +    N               SF+SNG A     SV   +++   DEAW+LL
Sbjct: 102 GLKSDLDEMPLPVN--------------GSFSSNGNA----QSVGTKSIE---DEAWDLL 140

Query: 173 RDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTL 232
           R S+V+YCGSPIGTIAANDP+S++VLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFIL+TL
Sbjct: 141 RQSVVFYCGSPIGTIAANDPSSTSVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILYTL 200

Query: 233 QLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGL 292
           QLQSWEKTMDCHSPGQGLMP SFKV+TVPLDGDDS TEEVLDPDFGEAAIGRVAPVDSGL
Sbjct: 201 QLQSWEKTMDCHSPGQGLMPCSFKVKTVPLDGDDSMTEEVLDPDFGEAAIGRVAPVDSGL 260

Query: 293 WWIILLRAYGKCSGDLLVQERIDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMG 352
           WWIILLRAYGKC+GDL VQER+DVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMG
Sbjct: 261 WWIILLRAYGKCTGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMG 320

Query: 353 IHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNE 412
           IHGHPLEIQALFYSAL+CAREML PEDGS DLIRALNNRLVAL+FHIREYYW+DL+K+NE
Sbjct: 321 IHGHPLEIQALFYSALVCAREMLTPEDGSVDLIRALNNRLVALNFHIREYYWLDLKKINE 380

Query: 413 IYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWS 472
           IYRY+TEEYSYDAVNKFNIYPDQIP WLV++MPN+GGYLIGNLQPAHMDFRFF+LGN+WS
Sbjct: 381 IYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQPAHMDFRFFTLGNLWS 440

Query: 473 IVNGLATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHN 532
           IV+ LAT DQSHAILDL+EAKWA+LVADMPLKICYPA+EG+EW+IITGSDPKNTPWSYHN
Sbjct: 441 IVSSLATNDQSHAILDLIEAKWAELVADMPLKICYPAMEGEEWRIITGSDPKNTPWSYHN 500

Query: 533 AGSWPTLLWQVSHGSI 548
            G+WPTLLWQ++  SI
Sbjct: 501 GGAWPTLLWQLTVASI 516

Length = 618

>gnl\|CDD\|221840 pfam12899, Glyco_hydro_100, Alkaline and neutral invertase	Back alignment and domain information

>gnl\|CDD\|178582 PLN03005, PLN03005, beta-fructofuranosidase	Back alignment and domain information

>gnl\|CDD\|178556 PLN02973, PLN02973, beta-fructofuranosidase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		557
PLN02703		618	beta-fructofuranosidase	100.0
PF12899		436	Glyco_hydro_100: Alkaline and neutral invertase; I	100.0
PLN03005		550	beta-fructofuranosidase	100.0
PLN02973		571	beta-fructofuranosidase	100.0
TIGR01561		575	gde_arch glycogen debranching enzyme, archaeal typ	100.0
PF06202		370	GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR	100.0
TIGR01531		1464	glyc_debranch glycogen debranching enzymye. glycog	100.0
COG3408		641	GDB1 Glycogen debranching enzyme [Carbohydrate tra	100.0
KOG3625		1521	consensus Alpha amylase [Carbohydrate transport an	99.91
PRK10137		786	alpha-glucosidase; Provisional	99.86
TIGR01577		616	oligosac_amyl oligosaccharide amylase. The name of	99.67
PF05592		509	Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; Int	99.26
PRK13271		569	treA trehalase; Provisional	99.15
PF04685		365	DUF608: Protein of unknown function, DUF608; Inter	99.08
COG3459		1056	Cellobiose phosphorylase [Carbohydrate transport a	98.93
PLN02567		554	alpha,alpha-trehalase	98.84
PRK13272		542	treA trehalase; Provisional	98.66
PRK13270		549	treF trehalase; Provisional	98.56
PF01204		512	Trehalase: Trehalase; InterPro: IPR001661 O-Glycos	98.55
COG3387		612	SGA1 Glucoamylase and related glycosyl hydrolases	98.54
TIGR01535		648	glucan_glucosid glucan 1,4-alpha-glucosidase. Gluc	98.45
PF06824		424	DUF1237: Protein of unknown function (DUF1237); In	97.66
PF03200		801	Glyco_hydro_63: Mannosyl oligosaccharide glucosida	97.25
COG1626		558	TreA Neutral trehalase [Carbohydrate transport and	97.12
COG3538		434	Uncharacterized conserved protein [Function unknow	96.93
PF00723		448	Glyco_hydro_15: Glycosyl hydrolases family 15; Int	96.67
COG4354		721	Predicted bile acid beta-glucosidase [Carbohydrate	96.53
KOG0602		600	consensus Neutral trehalase [Carbohydrate transpor	95.89
KOG2161		849	consensus Glucosidase I [Carbohydrate transport an	94.1
KOG2119		879	consensus Predicted bile acid beta-glucosidase [Ca	83.94

>PLN02703 beta-fructofuranosidase	Back alignment and domain information

Probab=100.00  E-value=1.5e-133  Score=1069.47  Aligned_cols=518  Identities=71%  Similarity=1.174  Sum_probs=479.8

Q ss_pred             CchhHHHHHHhcCCCCccccccCCCCCCCcccCcchhhhhhccchhhcccccccchhhhcccccccccCCCcCCC---Cc
Q 008699            1 MGTSEAVLQVLSGANPLLFNSAKCSGNLDATFPSRFLYKYTKKRVSRYKRLFNCSSTLQSDLGLNWLKGLGYGLS---GC   77 (557)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~   77 (557)
                      |.|||+|||+++|+++..++++.+|+|+....  .|+       ..+|++..+.+...+....+..++...-+++   .+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (618)
T PLN02703          1 MAASETVLRVPLGSLSQSCYLASFFVNSTPNL--SFK-------PVSYNRKKVRCTNSHEYSSVSACQDADGSFHSSNEC   71 (618)
T ss_pred             CchhhhHHhccccccCCcchhhhhhcCCcccc--ccc-------cccccccccccccccceeccCcccccccccccchhh
Confidence            89999999999999999999999999977664  222       5566666666666777777788877764444   45


Q ss_pred             ccccccccccccccccccccCccccCCCCceeeeccccccccccCCCCccccchhhhhhhhhhhccccCCCCCccccccc
Q 008699           78 REVNRLQLLSCKCQQAESVSGLTAEDGNGTWFVDSAKKLNLKSVANTPNILEFQDVQQFEQEKKSFTSNGAAGTTIDSVS  157 (557)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (557)
                      .+.+++..++||||+++..++..            ...+++||+.++-.   --.+    +.+++||++|+..+.     
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~-----  127 (618)
T PLN02703         72 LKGKKFVQMRCKCQKHDVEESIR------------STLLPSDGLKSDLD---EMPL----PVNGSFSSNGNAQSV-----  127 (618)
T ss_pred             hhhhhHHHHhhhhhhhhhhcccc------------cccccccccccccc---cccC----cccCcCCCCCccccc-----
Confidence            56899999999999999888776            78899988876421   1111    778889988866555     


Q ss_pred             ccchHHHHHHHHHHHHHhhcccCCCcceEEeecCCCCCccCCCCccchhhhHHHHHHHHccCCHHHHHHHHHHHHhhhhh
Q 008699          158 KATVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSW  237 (557)
Q Consensus       158 ~~~~~~~~~~A~~lLr~~~~~~~~~p~GtiAa~d~~~a~~~nY~~vfgRDt~ISllglL~~G~peiar~~L~~~~~Lqs~  237 (557)
                        ..++++++||++||+|+|+|+|+|+||+||.|+.+..++||++||+||++||++++|++|++||||+||.++++||++
T Consensus       128 --~~~~~~~eA~elL~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qVFiRDfVpsaLafLl~Ge~eIVrnFl~~tL~lq~~  205 (618)
T PLN02703        128 --GTKSIEDEAWDLLRQSVVFYCGSPIGTIAANDPSSTSVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILYTLQLQSW  205 (618)
T ss_pred             --CCChHHHHHHHHHHHhhhhhcCccceeEeccCCccccccCCCceeecccHHHHHHHHHCCCHHHHHHHHHHHHhhhhh
Confidence              778999999999999999999999999999998654569999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhhHhhhhHH
Q 008699          238 EKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQ  317 (557)
Q Consensus       238 ~~~~d~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad~Ge~aig~y~sVDAtLWfIial~~Y~k~TGD~sf~~~~e~~  317 (557)
                      +|+||+|++++|+||+||||.|+|+++++.++|++++||||+++|||+++|||+|||||++++|.++|||.+|++++++|
T Consensus       206 ektld~~q~g~G~mPaSfkv~~~~~~~~~~~~ee~l~aDfGe~AIgRV~pVDS~LWWIIllraY~k~TgD~sf~e~~~~Q  285 (618)
T PLN02703        206 EKTMDCHSPGQGLMPCSFKVKTVPLDGDDSMTEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCTGDLSVQERVDVQ  285 (618)
T ss_pred             HHHHHhccCCCCCcCceeeecccccccccccccccccCCcCccceeeeccccchhHHHHHHHHHHHhhccHHHhhhhhHH
Confidence            99999999999999999999999999888889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCcceecCCCcccccccCCCCCceeehHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHH
Q 008699          318 TGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSF  397 (557)
Q Consensus       318 ~~ik~IL~~~~~~~f~~~p~lLv~dG~~wmD~r~pR~G~PVEIQALwYnALr~a~~L~~~~~~~~~~~~~l~~ra~~L~~  397 (557)
                      ++|++||++|++++|+++|+++|+||++|||+|||++|||+|||||||+||||+.+|+....+..+.++++.+|+.+|++
T Consensus       286 ~gI~liL~LcLa~~Fd~fPtLlVpDgs~miDRrMgv~G~PLEiQaLfy~ALR~a~~~L~~~~~~~e~i~~i~~rl~~L~~  365 (618)
T PLN02703        286 TGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALVCAREMLTPEDGSVDLIRALNNRLVALNF  365 (618)
T ss_pred             HHHHHHHHHHccCcCCCCceEeccCCCchhccccCcCCccHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhhhhhhhHH
Confidence            99999999999999999999999999999999999999999999999999999999998866778999999999999999


Q ss_pred             HHHhhccccccchhhhhhccccccchhhhhccCCCCCCCCcccccccCCCCceeeccccCCccccccccccchhhhhcCC
Q 008699          398 HIREYYWIDLRKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGL  477 (557)
Q Consensus       398 ~f~~~FW~d~~~l~~i~r~~~e~y~~~avn~fni~pd~ipd~L~d~~~~~ggYl~gnv~P~~~D~R~falGNlLAl~~gL  477 (557)
                      |++++||+|.+++|+||||+||+|+++|+|+|||+|++||+||+||||++||||+|||+|++||||||++||+||+++||
T Consensus       366 hir~~yWld~~~ln~iyRykteey~~~A~NkfNi~p~siP~WL~dwlp~~gGYligNv~Pa~mDfRffsLGNlLAILs~L  445 (618)
T PLN02703        366 HIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQPAHMDFRFFTLGNLWSIVSSL  445 (618)
T ss_pred             HHHHHHhhcHHHhhHHHhhhhhhcchhhhhhcccCCCCcchHhhhhccccCceeeeeecccccccchhhhhhHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHhhhhhhccCCccccCCCCCCCCceeeeCCCCCCCCCccccCCcchhhhHHHHHHHHHhhhc
Q 008699          478 ATRDQSHAILDLMEAKWADLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQVSHGSIVGLYV  553 (557)
Q Consensus       478 l~~eqa~aVld~v~~~~~eLltp~pLRsl~P~i~d~~Wr~~t~gd~knrp~SYHNGgvWPwLLg~y~~A~lk~~~v  553 (557)
                      ++++|+++||++|+++|++|++.||||+|+|||++++||++|++||||.||||||||+||+|+|+|++|++|+=+.
T Consensus       446 at~~Qs~aIm~lIe~~w~~Lvg~MPlkIcyPaie~~EWRi~TG~DpKN~PWSYHNGGsWP~LlWf~~aA~iK~Gr~  521 (618)
T PLN02703        446 ATNDQSHAILDLIEAKWAELVADMPLKICYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQLTVASIKMGRP  521 (618)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhccCccccccCCcCCccceeeeCcCCCCCCccccCCCcchHHHHHHHHHHHHcCCH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999998654

>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases	Back alignment and domain information

>PLN03005 beta-fructofuranosidase	Back alignment and domain information

>PLN02973 beta-fructofuranosidase	Back alignment and domain information

>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative	Back alignment and domain information

>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT	Back alignment and domain information

>TIGR01531 glyc_debranch glycogen debranching enzymye	Back alignment and domain information

>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]	Back alignment and domain information

>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK10137 alpha-glucosidase; Provisional	Back alignment and domain information

>TIGR01577 oligosac_amyl oligosaccharide amylase	Back alignment and domain information

>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes	Back alignment and domain information

>PRK13271 treA trehalase; Provisional	Back alignment and domain information

>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []	Back alignment and domain information

>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PLN02567 alpha,alpha-trehalase	Back alignment and domain information

>PRK13272 treA trehalase; Provisional	Back alignment and domain information

>PRK13270 treF trehalase; Provisional	Back alignment and domain information

>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase	Back alignment and domain information

>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function	Back alignment and domain information

>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG3538 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism]	Back alignment and domain information

>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism]	Back alignment and domain information

>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		557
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1v7w_A		807	Chitobiose phosphorylase; beta-sandwich, (alpha/al	8e-09

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 58.3 bits (140), Expect = 5e-09
 Identities = 66/407 (16%), Positives = 121/407 (29%), Gaps = 107/407 (26%)

Query: 109 FVDSAKK-LNLKSVANTP-NIL---EFQDV----QQFEQEKKSFTSNGAAGTTIDSVSKA 159
           F D+     + K V + P +IL   E   +           + F +  +    +  V K 
Sbjct: 25  FEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM--VQKF 82

Query: 160 TVDCLEDEAWNLLRDSMVYYCGSPIGTIAANDPTSSNVLNYDQVFIRDFIPSGIAFL-LK 218
             + L    +  L   +      P             + N +QVF +  +     +L L+
Sbjct: 83  VEEVLRIN-YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLR 141

Query: 219 G---EYDIVRNFILH--------TLQLQS---------------WEKTMDCHSPGQGLMP 252
               E    +N ++          + L                 W    +C+SP   L  
Sbjct: 142 QALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM 201

Query: 253 A---SFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLL 309
                +++        D ++   L     +A + R          ++  + Y  C   LL
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR----------LLKSKPYENC---LL 248

Query: 310 VQERIDVQTGIKMILKLCLADGFDMF-PTLLVTDGSCMIDRRMGIHG------------H 356
           V    +VQ            + F++    LL T    + D                    
Sbjct: 249 VLL--NVQN--AKAW-----NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT 299

Query: 357 PLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREY-----YW--IDLRK 409
           P E+++L    L C  + L  E             ++A S  IR+       W  ++  K
Sbjct: 300 PDEVKSLLLKYLDCRPQDLPRE---VLTTNPRRLSIIAES--IRDGLATWDNWKHVNCDK 354

Query: 410 LNEIYRYKTEEYSYDAVN---------KFNIYPD--QIPPWLVE--W 443
           L  I      E S + +          + +++P    IP  L+   W
Sbjct: 355 LTTII-----ESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW 396

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* Length = 807	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		557
1v7w_A		807	Chitobiose phosphorylase; beta-sandwich, (alpha/al	99.94
3qde_A		811	Cellobiose phosphorylase; cellulase, phosphate, tr	99.93
3rrs_A		822	Cellobiose phosphorylase; GH94, alpha barrel, disa	99.93
3c68_A		761	Uncharacterized protein YGJK; GH63, processing alp	99.91
2z07_A		420	Putative uncharacterized protein TTHA0978; unchara	99.91
2jg0_A		535	Periplasmic trehalase; family 37, hydrolase, inhib	99.89
2okx_A		956	Rhamnosidase B; alpha barrel, glycoside hydrolase	99.76
3cih_A		739	Putative alpha-rhamnosidase; structural genomics,	99.73
1ulv_A		1020	Glucodextranase; GH family 15, (alpha-alpha)6-barr	99.33
1lf6_A		684	Glucoamylase; (alpha/alpha) barrel, 6 alpha-helica	99.14
3qry_B		426	Putative uncharacterized protein; alpha-alpha six	98.66
3qt9_A		427	Putative uncharacterized protein CPE0426; alpha-al	98.6
2p0v_A		489	Hypothetical protein BT3781; alpha-beta protein, s	98.59
3p2c_A		463	Putative glycosyl hydrolase; structural genomics,	98.45
2fba_A		492	Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hy	98.1
2vn4_A		599	Glucoamylase; hydrolase, carbohydrate binding, gly	97.95
1gai_A		472	Glucoamylase-471; hydrolase, glycosidase, polysacc	97.93
2rdy_A		803	BH0842 protein; PSI-II, structural genomics, prote	86.31
2eab_A		899	Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifi	83.89

>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*	Back alignment and structure

Probab=99.94  E-value=1.1e-26  Score=261.01  Aligned_cols=289  Identities=15%  Similarity=0.102  Sum_probs=198.0

Q ss_pred             ccch-hhhHHHHHHHHccCCHHHHHHHHHHHHhhhhhhhhcCCCCCCCC-CCCCcceeecccCCCCCCCccc------cc
Q 008699          202 QVFI-RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQG-LMPASFKVRTVPLDGDDSATEE------VL  273 (557)
Q Consensus       202 ~vfg-RDt~ISllglL~~G~peiar~~L~~~~~Lqs~~~~~d~~~~~~G-liP~sfKv~h~~~r~~~~~~e~------~l  273 (557)
                      ..|| ||++|++++++ .++|+++|++|+.++..|.          .+| ++|..+...+++..     |+.      .+
T Consensus       344 ~~~G~RD~~~~~~~l~-~~~p~~ar~~l~~~~~~Q~----------~~G~~~p~~~p~~~~~~~-----g~~~~~~~~~~  407 (807)
T 1v7w_A          344 TGLGYRDTAQDAISVP-HANPEMTRKRIVDLLRGQV----------KAGYGLHLFDPDWFDPEK-----EDVAPSKSPTV  407 (807)
T ss_dssp             CSEEHHHHHHHTTSCT-TTCHHHHHHHHHHHHHTBC----------TTSCBCSEECGGGGCC------------------
T ss_pred             CccCchHHhHHHHHHh-hcCHHHHHHHHHHHHhccc----------cCCCcceeeeeccccccc-----cccCCcccccc
Confidence            4699 99999999966 8899999999988887665          445 56764311121100     100      00


Q ss_pred             CCCCCCCc--cC-ccCCCCcHHHHHHHHHHHHHHhCChhhHhhhhHHH-----------HHHHHHHHHHhCCCCCCCcce
Q 008699          274 DPDFGEAA--IG-RVAPVDSGLWWIILLRAYGKCSGDLLVQERIDVQT-----------GIKMILKLCLADGFDMFPTLL  339 (557)
Q Consensus       274 ~ad~Ge~a--ig-~y~sVDAtLWfIial~~Y~k~TGD~sf~~~~e~~~-----------~ik~IL~~~~~~~f~~~p~lL  339 (557)
                      +++.|+..  ++ +....|+++||++++++|+++|||.+|++  ++.+           +++.+++++...   ..++++
T Consensus       408 ~g~~~~~~~~~g~~~~~~D~~lw~~~~~~~y~~~tGD~~~L~--e~~p~~~~~~~~v~e~~~~~~~~~~~~---~~~~GL  482 (807)
T 1v7w_A          408 VPTPSDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFD--QMIPYADGGEASVYEHMKAALDFSAEY---VGQTGI  482 (807)
T ss_dssp             ---------CCCGGGCBSSGGGGHHHHHHHHHHHHCCGGGGG--CEEECTTSCEEEHHHHHHHHHHHHHHS---BCTTSC
T ss_pred             ccCCCcchhhcCCCCCccchhhHHHHHHHHHHHHhCCHHHHh--cccccccCCcchHHHHHHHHHHHHHhc---CCCCCC
Confidence            01112111  11 12334999999999999999999999985  3433           688999998762   223455


Q ss_pred             ec-CCCcccccccC-CCCCceeehHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhcc
Q 008699          340 VT-DGSCMIDRRMG-IHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYK  417 (557)
Q Consensus       340 v~-dG~~wmD~r~p-R~G~PVEIQALwYnALr~a~~L~~~~~~~~~~~~~l~~ra~~L~~~f~~~FW~d~~~l~~i~r~~  417 (557)
                      +. ...+|.|. |. ..|.+||+|||||.||+.+++|++. .++.+.++++.+++++|++.|+++||.+..+.   |.  
T Consensus       483 ~~~~~~DW~D~-~~~~~g~~v~~~a~~y~al~~~a~la~~-lG~~~~a~~~~~~A~~lk~~~~~~~w~~~~~~---f~--  555 (807)
T 1v7w_A          483 CKGLRADWNDC-LNLGGGESSMVSFLHFWALQEFIDLAKF-LGKDQDVNTYTEMAANVREACETHLWDDEGGW---YI--  555 (807)
T ss_dssp             BEEETCSSSTT-CCCEEEEEHHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHHHSEETTTTE---EC--
T ss_pred             cccCCCCCCCc-CCCCCCeehhHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHhccCCCCCe---ee--
Confidence            43 34688776 42 3789999999999999999999987 46677788899999999999999999753211   10  


Q ss_pred             ccccchhhhhccCCCCCCCCcccccccCCCCceeeccccCCccccccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhh
Q 008699          418 TEEYSYDAVNKFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADL  497 (557)
Q Consensus       418 ~e~y~~~avn~fni~pd~ipd~L~d~~~~~ggYl~gnv~P~~~D~R~falGNlLAl~~gLl~~eqa~aVld~v~~~~~eL  497 (557)
                       ..|                       ..+|.. +|+.  ...+.++++.+|.+|+++++++++|++++++.|.+   +|
T Consensus       556 -~~~-----------------------~~d~~~-~g~~--~~~~~~~~~~~~~~al~~g~~~~e~a~~~l~~v~~---~L  605 (807)
T 1v7w_A          556 -RGL-----------------------TKNGDK-IGTA--QQQEGRVHLESNTLAVLSGLASQERGEQAMDAVDE---HL  605 (807)
T ss_dssp             -CEE-----------------------CTTSCE-ESCT--TCSSCCEEHHHHHHHHHTTCSCHHHHHHHHHHHHH---HH
T ss_pred             -eee-----------------------ccCCCC-cCCc--cCCCCcCcccchHHHHhhCCCCHHHHHHHHHHHHH---hc
Confidence             000                       000000 1111  11123577788999999999999999999999998   89


Q ss_pred             hccCCccccCCCCCCCCceeeeCCCCCCCCCccccCCcchhhhHHHHHHHHHh
Q 008699          498 VADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQVSHGSIVG  550 (557)
Q Consensus       498 ltp~pLRsl~P~i~d~~Wr~~t~gd~knrp~SYHNGgvWPwLLg~y~~A~lk~  550 (557)
                      ++|.|+|+++|+...  +....++-..+.|..||||++||+-...++.|+.|.
T Consensus       606 ~~~~G~~~~~p~~~~--~~~~~g~~~~y~~~~~enG~~~~~~~~w~~~al~~~  656 (807)
T 1v7w_A          606 FSPYGLHLNAPSFST--PNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKL  656 (807)
T ss_dssp             EETTEECSEESCCCS--CCTTTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHT
T ss_pred             CCCCceeecCCcccc--cCcCCceeeccCCccccccccccchHHHHHHHHHHc
Confidence            999999999996432  111112223466788999999999877777777664

PyMOL of 1v7w

>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}	Back alignment and structure

>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*	Back alignment and structure

>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}	Back alignment and structure

>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*	Back alignment and structure

>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}	Back alignment and structure

>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}	Back alignment and structure

>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*	Back alignment and structure

>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*	Back alignment and structure

>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*	Back alignment and structure

>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A	Back alignment and structure

>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8	Back alignment and structure

>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*	Back alignment and structure

>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A	Back alignment and structure

>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*	Back alignment and structure

>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*	Back alignment and structure

>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}	Back alignment and structure

>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		557
d1v7wa1		531	Chitobiose phosphorylase ChbP {Vibrio proteolyticu	99.85
d1lf6a1		397	Bacterial glucoamylase, C-terminal domain {Thermoa	99.74
d2jg0a1		511	Periplasmic trehalase TreA {Escherichia coli [TaxI	99.51
d1ulva1		413	Glucodextranase, domain A {Arthrobacter globiformi	99.33
d2p0va1		443	Hypothetical protein BT3781 {Bacteroides thetaiota	98.01
d2nvpa1		426	Hypothetical protein CPF0428 {Clostridium perfring	97.72
d2fbaa1		492	Glucoamylase {Yeast (Saccharomycopsis fibuligera)	97.57
d1gaia_		472	Glucoamylase {Aspergillus awamori, variant x100 [T	96.25
d1h54a1		485	Lactobacillus maltose phosphorylase, central domai	89.78

>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Glycosyltransferase family 36 C-terminal domain
domain: Chitobiose phosphorylase ChbP
species: Vibrio proteolyticus [TaxId: 671]

Probab=99.85  E-value=2.3e-21  Score=200.53  Aligned_cols=304  Identities=15%  Similarity=0.044  Sum_probs=196.6

Q ss_pred             CCCccchhhhHHHHHHHHccCCHHHHHHHHHHHHhhhhhhhhcCCCCCCCCCCCCcceeecccCCCCCCCcccccCCCC-
Q 008699          199 NYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDF-  277 (557)
Q Consensus       199 nY~~vfgRDt~ISllglL~~G~peiar~~L~~~~~Lqs~~~~~d~~~~~~GliP~sfKv~h~~~r~~~~~~e~~l~ad~-  277 (557)
                      .|...|.||+++.+++++ .++||+||++|+.+...|.....+-+-....|.++......     .+.. +.....+.. 
T Consensus        72 ~~~~~~~rD~~~~~~~~~-~~~pe~Ar~~L~~~~~~q~~~g~~~~~~~~~g~~~~~~~~~-----~~~~-~~~~~~~~~~  144 (531)
T d1v7wa1          72 GRTGLGYRDTAQDAISVP-HANPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEKEDVA-----PSKS-PTVVPTPSDE  144 (531)
T ss_dssp             SCCSEEHHHHHHHTTSCT-TTCHHHHHHHHHHHHHTBCTTSCBCSEECGGGGCC--------------------------
T ss_pred             CCCcEEEcHHHHHHHHHH-hcCHHHHHHHHHHHHhhhhhcccchhhcCCCcCcCCccccc-----cccc-CcCCCCCccc
Confidence            455666799999999976 46999999999988776653221000000112221111000     0000 000000000 


Q ss_pred             CCCccCccCCCCcHHHHHHHHHHHHHHhCChhhHhh--h-------hHHHHHHHHHHHHHhCCCCCCCcceec-CCCccc
Q 008699          278 GEAAIGRVAPVDSGLWWIILLRAYGKCSGDLLVQER--I-------DVQTGIKMILKLCLADGFDMFPTLLVT-DGSCMI  347 (557)
Q Consensus       278 Ge~aig~y~sVDAtLWfIial~~Y~k~TGD~sf~~~--~-------e~~~~ik~IL~~~~~~~f~~~p~lLv~-dG~~wm  347 (557)
                      +.........+|.++|+++++++|+++|||.+|++.  +       .+...++...++....   ..+.++.. ....|.
T Consensus       145 ~~~~~~~~~~~d~~~~i~~a~~~Y~~~TgD~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~gl~~~g~~dw~  221 (531)
T d1v7wa1         145 DKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEY---VGQTGICKGLRADWN  221 (531)
T ss_dssp             --CCCGGGCBSSGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHS---BCTTSCBEEETCSSS
T ss_pred             cccccccccccccHHHHHHHHHHHHHhhCCHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhhe---eCCCCCcccCCCccc
Confidence            000111345679999999999999999999999741  0       1334444444444332   23444433 346788


Q ss_pred             ccccCCCCCceeehHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhhccccccchhhhhhccccccchhhhh
Q 008699          348 DRRMGIHGHPLEIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDLRKLNEIYRYKTEEYSYDAVN  427 (557)
Q Consensus       348 D~r~pR~G~PVEIQALwYnALr~a~~L~~~~~~~~~~~~~l~~ra~~L~~~f~~~FW~d~~~l~~i~r~~~e~y~~~avn  427 (557)
                      |.-.++.|..+++|+++|.||+.+++|++. .++.+.++++.+.+..|+..|+++||.+..+.+                
T Consensus       222 d~~~~~~~~~~~~~~~~~~al~~~~~la~~-~g~~~~a~~~~~~a~~l~~~~~~~~~~~~~~~~----------------  284 (531)
T d1v7wa1         222 DCLNLGGGESSMVSFLHFWALQEFIDLAKF-LGKDQDVNTYTEMAANVREACETHLWDDEGGWY----------------  284 (531)
T ss_dssp             TTCCCEEEEEHHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEE----------------
T ss_pred             ccccCCCCccHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHhcCCccccce----------------
Confidence            875566778899999999999999999987 567778888899999999999999997533211                


Q ss_pred             ccCCCCCCCCcccccccCCCCceeeccccCCccccccccccchhhhhcCCCCHHHHHHHHHHHHHhhhhhhccCCccccC
Q 008699          428 KFNIYPDQIPPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNIWSIVNGLATRDQSHAILDLMEAKWADLVADMPLKICY  507 (557)
Q Consensus       428 ~fni~pd~ipd~L~d~~~~~ggYl~gnv~P~~~D~R~falGNlLAl~~gLl~~eqa~aVld~v~~~~~eLltp~pLRsl~  507 (557)
                                   .+++..++ .-++...+  .+.+++..+|.+++++++++++|++++++.+.+   +|+++.+++++.
T Consensus       285 -------------~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~---~l~~~~~~~~~~  345 (531)
T d1v7wa1         285 -------------IRGLTKNG-DKIGTAQQ--QEGRVHLESNTLAVLSGLASQERGEQAMDAVDE---HLFSPYGLHLNA  345 (531)
T ss_dssp             -------------CCEECTTS-CEESCTTC--SSCCEEHHHHHHHHHTTCSCHHHHHHHHHHHHH---HHEETTEECSEE
T ss_pred             -------------eEEEcCCC-CcccccCc--cccccchhhcchhhhcCCCCHHHHHHHHHHHHH---hhcCchhhhccc
Confidence                         01111111 11122222  334678888999999999999999999999998   999999999999


Q ss_pred             CCCCCCCceeeeCCCCCCCCCccccCCcchhhhHHHHHHHHHh
Q 008699          508 PALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQVSHGSIVG  550 (557)
Q Consensus       508 P~i~d~~Wr~~t~gd~knrp~SYHNGgvWPwLLg~y~~A~lk~  550 (557)
                      |+  ...+......-..+.|..||||++||+....++.|+.+.
T Consensus       346 ~~--~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~al~~~  386 (531)
T d1v7wa1         346 PS--FSTPNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKL  386 (531)
T ss_dssp             SC--CCSCCTTTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHT
T ss_pred             cc--cccchhhcccccccCCccccCCCcCcHHHHHHHHHHHHc
Confidence            94  334333333334567889999999999988888776654

PyMOL of d1v7wa1

>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]}	Back information, alignment and structure

>d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]}	Back information, alignment and structure

>d2p0va1 a.102.1.8 (A:39-481) Hypothetical protein BT3781 {Bacteroides thetaiotaomicron [TaxId: 818]}	Back information, alignment and structure

>d2nvpa1 a.102.1.8 (A:2-427) Hypothetical protein CPF0428 {Clostridium perfringens [TaxId: 1502]}	Back information, alignment and structure

>d2fbaa1 a.102.1.1 (A:1-492) Glucoamylase {Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]}	Back information, alignment and structure

>d1gaia_ a.102.1.1 (A:) Glucoamylase {Aspergillus awamori, variant x100 [TaxId: 105351]}	Back information, alignment and structure

>d1h54a1 a.102.1.4 (A:269-753) Lactobacillus maltose phosphorylase, central domain {Lactobacillus brevis [TaxId: 1580]}	Back information, alignment and structure