Citrus Sinensis ID: 008747

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-----
MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYDNADASVGEKSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW
cEEEEEEcccccccccccHHHHHHHHHcccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEccccccccccccccccccccccccccEEEEEEEEEEEccccccccEEEEEEEccccccccccccEEEEEccccHHHHHHHHHHHccccccEEEEEccccccccccccccccccccccHHHHHHHcccccccccHHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHcccccccHHHHHHHHccccccccccccccccccccEEEEEEEEEEEEccccccEEccccHHHHccccccccccccEEEEEEEcccccccccccccEEEEcccccHHHHHHHHHHHHHHHHHccccccEEEEEccccccccccHHHHHHHHHHccccccEEEcccccccccccccHHHHHcHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccc
cEEEEEEEEEcccEEcHHHHHHHHHHHHcccccccccccEEEEEEEEccccccccHHHHHHHHHHHHcccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEccccccHHHHHHHHcccccccccccccccccEEEEEEcccccccccEEEEEEEEccccEEEccccEEEEEccccHHHHHHHHHHHccccccEEEEEEcccccccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHHHHcHccHHHHHHHHHcccccHHHHHHHcccccccHHHHHHHHccEcccEEEEccccccccccEEEEEEEccEEEcccccEEEcHHHHHHHccccccccccccEEEEEEEcccccccccccccEEEEccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHcHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEc
MKIYVIgcrygdgeptdnaARFYKWFTEQKEGGEWLQKLKYGvfglgnrqyeHFNKIAKVVDEILANqgakrlvpvglgdddqciedDFSAWRELVWPEldnllrddddpttvstpytAAISEYRVVfydnadasvgekswgnanghavydaqhpcrsnvavrkelhtpssdrscthlefdiagtgltyetgdhvGVYCENLSETVEEALSLlglspdtyfslhtdkedgtplgkstlpptfppcslrtALTKYADLLSSPKKSALLALAAhasdpteaDRLRhlaspagkdeYAQWIVASQRSLLEVMsefpsakpplgvFFAAIvprlqpryysisssprvapsrIHVTCALVyektptgrvhkglcstwmknslpmeksndcswapifvrqsnfklpadakvpiimigpgtglapfRGFLQERFALQEAGaelgpsllffgcrnrkmdyiyeDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQeqgsldsskAESMVKNLQMTGRYLRDVW
mkiyvigcrygdgeptdnAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDnllrddddpttVSTPYTAAISEYRVVFYDNADASVGEKSWGNANGHAVYDAQHPCRSNVAVRKELHtpssdrsctHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSisssprvapsrIHVTCALVyektptgrvhkgLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIvqeqgsldsskaesmvknlqmtgrylrdvw
MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYDNADASVGEKSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYadllsspkksallalaahasdpTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW
**IYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYDNADASVGEKSWGNANGHAVYDAQHPCRSNVAVR**********SCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLH********************CSLRTALTKYADLL**********************************EYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIV*****************************
MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDD**********AAISEYRVVFYDN*********************QHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQG**DSSKAESMVKNLQMTGRYLRDVW
MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYDNADASVGEKSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW
MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYDNADASVGEKSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW
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MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYDNADASVGEKSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query555 2.2.26 [Sep-21-2011]
Q05001714 NADPH--cytochrome P450 re N/A no 0.992 0.771 0.801 0.0
Q9SUM3711 NADPH--cytochrome P450 re yes no 0.980 0.765 0.776 0.0
P37116690 NADPH--cytochrome P450 re N/A no 0.994 0.8 0.727 0.0
Q9SB48692 NADPH--cytochrome P450 re no no 0.980 0.786 0.703 0.0
Q3SYT8678 NADPH--cytochrome P450 re yes no 0.949 0.777 0.409 1e-120
P04175678 NADPH--cytochrome P450 re yes no 0.949 0.777 0.412 1e-120
P00389679 NADPH--cytochrome P450 re yes no 0.953 0.779 0.407 1e-119
P16435677 NADPH--cytochrome P450 re yes no 0.958 0.785 0.404 1e-119
P37040678 NADPH--cytochrome P450 re yes no 0.963 0.789 0.400 1e-118
P37039678 NADPH--cytochrome P450 re yes no 0.949 0.777 0.403 1e-118
>sp|Q05001|NCPR_CATRO NADPH--cytochrome P450 reductase OS=Catharanthus roseus GN=CPR PE=2 SV=1 Back     alignment and function desciption
 Score =  935 bits (2416), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/555 (80%), Positives = 501/555 (90%), Gaps = 4/555 (0%)

Query: 4   YVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDE 63
           + I   YGDGEPTDNAARFYKWF E  + G+WL+ L+YGVFGLGNRQYEHFNKIAKVVDE
Sbjct: 161 FFILATYGDGEPTDNAARFYKWFVEGNDRGDWLKNLQYGVFGLGNRQYEHFNKIAKVVDE 220

Query: 64  ILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISE 123
            +A QG KR+VP+ LGDDDQCIEDDF+AWRE VWPELDNLLRD+DD TTVST YTAAI E
Sbjct: 221 KVAEQGGKRIVPLVLGDDDQCIEDDFAAWRENVWPELDNLLRDEDD-TTVSTTYTAAIPE 279

Query: 124 YRVVFYDNADASVGEKSW---GNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEF 180
           YRVVF D +D+ + E +    G ANG+ VYDAQHPCRSNVAVRKELHTP+SDRSCTHL+F
Sbjct: 280 YRVVFPDKSDSLISEANGHANGYANGNTVYDAQHPCRSNVAVRKELHTPASDRSCTHLDF 339

Query: 181 DIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPP 240
           DIAGTGL+Y TGDHVGVYC+NLSETVEEA  LL L P+TYFSLH DKEDGTPL  S+LPP
Sbjct: 340 DIAGTGLSYGTGDHVGVYCDNLSETVEEAERLLNLPPETYFSLHADKEDGTPLAGSSLPP 399

Query: 241 TFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVA 300
            FPPC+LRTALT+YADLL++PKKSALLALAA+ASDP EADRL++LASPAGKDEYAQ +VA
Sbjct: 400 PFPPCTLRTALTRYADLLNTPKKSALLALAAYASDPNEADRLKYLASPAGKDEYAQSLVA 459

Query: 301 SQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTP 360
           +QRSLLEVM+EFPSAKPPLGVFFAAI PRLQPR+YSISSSPR+APSRIHVTCALVYEKTP
Sbjct: 460 NQRSLLEVMAEFPSAKPPLGVFFAAIAPRLQPRFYSISSSPRMAPSRIHVTCALVYEKTP 519

Query: 361 TGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFR 420
            GR+HKG+CSTWMKN++P+E+S DCSWAPIFVRQSNFKLPAD KVP+IMIGPGTGLAPFR
Sbjct: 520 GGRIHKGVCSTWMKNAIPLEESRDCSWAPIFVRQSNFKLPADPKVPVIMIGPGTGLAPFR 579

Query: 421 GFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPT 480
           GFLQER AL+E GAELG ++ FFGCRNRKMDYIYEDELN+F++ GALS+L+VAFSREGPT
Sbjct: 580 GFLQERLALKEEGAELGTAVFFFGCRNRKMDYIYEDELNHFLEIGALSELLVAFSREGPT 639

Query: 481 KEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESM 540
           K+YVQHKM EK+SDIW M+S+GAY+YVCGDAK MARDVHRTLHTI QEQGS+DS++AE  
Sbjct: 640 KQYVQHKMAEKASDIWRMISDGAYVYVCGDAKGMARDVHRTLHTIAQEQGSMDSTQAEGF 699

Query: 541 VKNLQMTGRYLRDVW 555
           VKNLQMTGRYLRDVW
Sbjct: 700 VKNLQMTGRYLRDVW 714
This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5.
Catharanthus roseus (taxid: 4058)
EC: 1EC: .EC: 6EC: .EC: 2EC: .EC: 4
>sp|Q9SUM3|NCPR2_ARATH NADPH--cytochrome P450 reductase 2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1 Back     alignment and function description
>sp|P37116|NCPR_VIGRR NADPH--cytochrome P450 reductase OS=Vigna radiata var. radiata PE=1 SV=1 Back     alignment and function description
>sp|Q9SB48|NCPR1_ARATH NADPH--cytochrome P450 reductase 1 OS=Arabidopsis thaliana GN=ATR1 PE=1 SV=1 Back     alignment and function description
>sp|Q3SYT8|NCPR_BOVIN NADPH--cytochrome P450 reductase OS=Bos taurus GN=POR PE=2 SV=3 Back     alignment and function description
>sp|P04175|NCPR_PIG NADPH--cytochrome P450 reductase OS=Sus scrofa GN=POR PE=1 SV=2 Back     alignment and function description
>sp|P00389|NCPR_RABIT NADPH--cytochrome P450 reductase OS=Oryctolagus cuniculus GN=POR PE=1 SV=1 Back     alignment and function description
>sp|P16435|NCPR_HUMAN NADPH--cytochrome P450 reductase OS=Homo sapiens GN=POR PE=1 SV=2 Back     alignment and function description
>sp|P37040|NCPR_MOUSE NADPH--cytochrome P450 reductase OS=Mus musculus GN=Por PE=1 SV=2 Back     alignment and function description
>sp|P37039|NCPR_CAVPO NADPH--cytochrome P450 reductase OS=Cavia porcellus GN=POR PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query555
359485011 705 PREDICTED: NADPH--cytochrome P450 reduct 0.983 0.774 0.840 0.0
224551852 710 NADPH:cytochrome P450 reductase [Gossypi 0.981 0.767 0.862 0.0
297735398 660 unnamed protein product [Vitis vinifera] 0.983 0.827 0.840 0.0
449461207 708 PREDICTED: NADPH--cytochrome P450 reduct 0.983 0.771 0.835 0.0
449522700 708 PREDICTED: NADPH--cytochrome P450 reduct 0.983 0.771 0.833 0.0
13183566 712 NADPH-cytochrome P450 oxydoreductase iso 0.983 0.766 0.818 0.0
197209812 706 cytochrome P450 reductase [Lotus japonic 0.981 0.771 0.824 0.0
6503253 704 putative NADPH-cytochrome P450 reductase 0.981 0.774 0.819 0.0
449457161 708 PREDICTED: NADPH--cytochrome P450 reduct 0.983 0.771 0.827 0.0
224142245 712 predicted protein [Populus trichocarpa] 0.983 0.766 0.807 0.0
>gi|359485011|ref|XP_002270732.2| PREDICTED: NADPH--cytochrome P450 reductase-like [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1001 bits (2587), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/546 (84%), Positives = 510/546 (93%)

Query: 10  YGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQG 69
           YGDGEPTDNAARFYKWF E KE GEWLQ LKYGVFGLGNRQYEHFNK+AKVVD+I+  QG
Sbjct: 160 YGDGEPTDNAARFYKWFAEGKERGEWLQNLKYGVFGLGNRQYEHFNKVAKVVDDIITEQG 219

Query: 70  AKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFY 129
            KR+VPVGLGDDDQCIEDDF+AWREL+WPELD LLRD+DD TTVSTPYTAA+ EYRVVF+
Sbjct: 220 GKRIVPVGLGDDDQCIEDDFAAWRELLWPELDQLLRDEDDATTVSTPYTAAVLEYRVVFH 279

Query: 130 DNADASVGEKSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTY 189
           D   AS+ +KSWG+ANGH V+DAQHPCR+NVAVRKELHTP+SDRSCTHLEFDI+GTGLTY
Sbjct: 280 DPEGASLQDKSWGSANGHTVHDAQHPCRANVAVRKELHTPASDRSCTHLEFDISGTGLTY 339

Query: 190 ETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRT 249
           ETGDHVGVYCENL ETVEEA  LLG SPD YFS+HT++EDGTPL  S+L P FPPC+LRT
Sbjct: 340 ETGDHVGVYCENLPETVEEAERLLGFSPDVYFSIHTEREDGTPLSGSSLSPPFPPCTLRT 399

Query: 250 ALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVM 309
           ALT+YAD+LSSPKKSAL+ALAAHASDP+EADRL++LASP+GKDEYAQW+VASQRSLLE+M
Sbjct: 400 ALTRYADVLSSPKKSALVALAAHASDPSEADRLKYLASPSGKDEYAQWVVASQRSLLEIM 459

Query: 310 SEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLC 369
           +EFPSAKPPLGVFFAA+ PRLQPRYYSISSSP++ PSRIHVTCALV +K PTGR+HKG+C
Sbjct: 460 AEFPSAKPPLGVFFAAVAPRLQPRYYSISSSPKMVPSRIHVTCALVCDKMPTGRIHKGIC 519

Query: 370 STWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFAL 429
           STWMK ++P+E+S DCSWAPIFVRQSNFKLPAD  VPIIMIGPGTGLAPFRGFLQERFAL
Sbjct: 520 STWMKYAVPLEESQDCSWAPIFVRQSNFKLPADTSVPIIMIGPGTGLAPFRGFLQERFAL 579

Query: 430 QEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMM 489
           +EAGAELG S+LFFGCRNRKMDYIYEDELN FV+SGALS+LIVAFSREGPTKEYVQHKMM
Sbjct: 580 KEAGAELGSSILFFGCRNRKMDYIYEDELNGFVESGALSELIVAFSREGPTKEYVQHKMM 639

Query: 490 EKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGR 549
           EK+SDIWN++S+G Y+YVCGDAK MARDVHRTLHTI+QEQGSLDSSKAESMVKNLQMTGR
Sbjct: 640 EKASDIWNVISQGGYIYVCGDAKGMARDVHRTLHTILQEQGSLDSSKAESMVKNLQMTGR 699

Query: 550 YLRDVW 555
           YLRDVW
Sbjct: 700 YLRDVW 705

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224551852|gb|ACN54324.1| NADPH:cytochrome P450 reductase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|297735398|emb|CBI17838.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449461207|ref|XP_004148333.1| PREDICTED: NADPH--cytochrome P450 reductase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449522700|ref|XP_004168364.1| PREDICTED: NADPH--cytochrome P450 reductase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|13183566|gb|AAK15261.1|AF302498_1 NADPH-cytochrome P450 oxydoreductase isoform 3 [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|197209812|dbj|BAG68945.1| cytochrome P450 reductase [Lotus japonicus] Back     alignment and taxonomy information
>gi|6503253|gb|AAC09468.2| putative NADPH-cytochrome P450 reductase [Pisum sativum] Back     alignment and taxonomy information
>gi|449457161|ref|XP_004146317.1| PREDICTED: NADPH--cytochrome P450 reductase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224142245|ref|XP_002324469.1| predicted protein [Populus trichocarpa] gi|222865903|gb|EEF03034.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query555
TAIR|locus:2121894692 ATR1 "P450 reductase 1" [Arabi 0.980 0.786 0.676 3.1e-202
UNIPROTKB|F1P7R1703 POR "NADPH--cytochrome P450 re 0.947 0.748 0.401 3.6e-105
UNIPROTKB|A5D9D3680 POR "NADPH--cytochrome P450 re 0.962 0.785 0.399 7.5e-105
UNIPROTKB|Q3SYT8678 POR "NADPH--cytochrome P450 re 0.962 0.787 0.399 7.5e-105
UNIPROTKB|F1P2T2679 POR "NADPH--cytochrome P450 re 0.945 0.773 0.401 2.5e-104
UNIPROTKB|P04175678 POR "NADPH--cytochrome P450 re 0.947 0.775 0.403 3.2e-104
UNIPROTKB|P16435677 POR "NADPH--cytochrome P450 re 0.956 0.784 0.395 8.6e-104
FB|FBgn0015623679 Cpr "Cytochrome P450 reductase 0.951 0.777 0.405 7.7e-103
RGD|68335678 Por "P450 (cytochrome) oxidore 0.962 0.787 0.389 1.3e-102
MGI|MGI:97744678 Por "P450 (cytochrome) oxidore 0.962 0.787 0.389 1.6e-102
TAIR|locus:2121894 ATR1 "P450 reductase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1957 (694.0 bits), Expect = 3.1e-202, P = 3.1e-202
 Identities = 370/547 (67%), Positives = 430/547 (78%)

Query:    10 YGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQG 69
             YGDGEPTDNAARFYKWFTE+ E    LQ+L YGVF LGNRQYEHFNKI  V+DE L  +G
Sbjct:   148 YGDGEPTDNAARFYKWFTEENERDIKLQQLAYGVFALGNRQYEHFNKIGIVLDEELCKKG 207

Query:    70 AKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFY 129
             AKRL+ VGLGDDDQ IEDDF+AW+E +W ELD LL+D+DD + V+TPYTA I EYRVV +
Sbjct:   208 AKRLIEVGLGDDDQSIEDDFNAWKESLWSELDKLLKDEDDKS-VATPYTAVIPEYRVVTH 266

Query:   130 DNADASVGEKSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTY 189
             D    +        ANG+   D  HPCR +VAV+KELHT  SDRSC HLEFDI+ TG+TY
Sbjct:   267 DPRFTTQKSMESNVANGNTTIDIHHPCRVDVAVQKELHTHESDRSCIHLEFDISRTGITY 326

Query:   190 ETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFP-PCSLR 248
             ETGDHVGVY EN  E VEEA  LLG S D  FS+H DKEDG+PL +S +PP FP PC+L 
Sbjct:   327 ETGDHVGVYAENHVEIVEEAGKLLGHSLDLVFSIHADKEDGSPL-ESAVPPPFPGPCTLG 385

Query:   249 TALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEV 308
             T L +Y                      +EA++L+HL SP GKDEY+QWIVASQRSLLEV
Sbjct:   386 TGLARYADLLNPPRKSALVALAAYATEPSEAEKLKHLTSPDGKDEYSQWIVASQRSLLEV 445

Query:   309 MSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGL 368
             M+ FPSAKPPLGVFFAAI PRLQPRYYSISSSPR+APSR+HVT ALVY  TPTGR+HKG+
Sbjct:   446 MAAFPSAKPPLGVFFAAIAPRLQPRYYSISSSPRLAPSRVHVTSALVYGPTPTGRIHKGV 505

Query:   369 CSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFA 428
             CSTWMKN++P EKS++CS APIF+R SNFKLP++   PI+M+GPGTGLAPFRGFLQER A
Sbjct:   506 CSTWMKNAVPAEKSHECSGAPIFIRASNFKLPSNPSTPIVMVGPGTGLAPFRGFLQERMA 565

Query:   429 LQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKM 488
             L+E G ELG SLLFFGCRNR+MD+IYEDELNNFV  G +S+LI+AFSREG  KEYVQHKM
Sbjct:   566 LKEDGEELGSSLLFFGCRNRQMDFIYEDELNNFVDQGVISELIMAFSREGAQKEYVQHKM 625

Query:   489 MEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTG 548
             MEK++ +W+++ E  YLYVCGDAK MARDVHRTLHTIVQEQ  + SS+AE++VK LQ  G
Sbjct:   626 MEKAAQVWDLIKEEGYLYVCGDAKGMARDVHRTLHTIVQEQEGVSSSEAEAIVKKLQTEG 685

Query:   549 RYLRDVW 555
             RYLRDVW
Sbjct:   686 RYLRDVW 692
GO:0003958 "NADPH-hemoprotein reductase activity" evidence=IEA;IDA
GO:0005506 "iron ion binding" evidence=IEA
GO:0010181 "FMN binding" evidence=IEA
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009737 "response to abscisic acid stimulus" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0009698 "phenylpropanoid metabolic process" evidence=IDA
GO:0006979 "response to oxidative stress" evidence=IEP
UNIPROTKB|F1P7R1 POR "NADPH--cytochrome P450 reductase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|A5D9D3 POR "NADPH--cytochrome P450 reductase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SYT8 POR "NADPH--cytochrome P450 reductase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1P2T2 POR "NADPH--cytochrome P450 reductase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P04175 POR "NADPH--cytochrome P450 reductase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|P16435 POR "NADPH--cytochrome P450 reductase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0015623 Cpr "Cytochrome P450 reductase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
RGD|68335 Por "P450 (cytochrome) oxidoreductase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:97744 Por "P450 (cytochrome) oxidoreductase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SUM3NCPR2_ARATH1, ., 6, ., 2, ., 40.77650.98010.7651yesno
P37116NCPR_VIGRR1, ., 6, ., 2, ., 40.72740.99450.8N/Ano
Q05001NCPR_CATRO1, ., 6, ., 2, ., 40.80180.99270.7717N/Ano
Q5E841CYSJ_VIBF11, ., 8, ., 1, ., 20.31530.87740.8062yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.6.2.40.991
3rd Layer1.6.20.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query555
cd06204416 cd06204, CYPOR, NADPH cytochrome p450 reductase (C 0.0
COG0369587 COG0369, CysJ, Sulfite reductase, alpha subunit (f 1e-141
cd06207382 cd06207, CyPoR_like, NADPH cytochrome p450 reducta 1e-125
cd06199360 cd06199, SiR, Cytochrome p450- like alpha subunits 1e-119
cd06203398 cd06203, methionine_synthase_red, Human methionine 1e-106
cd06202406 cd06202, Nitric_oxide_synthase, The ferredoxin-red 1e-105
pfam00667217 pfam00667, FAD_binding_1, FAD binding domain 1e-103
TIGR01931597 TIGR01931, cysJ, sulfite reductase [NADPH] flavopr 1e-102
cd06206384 cd06206, bifunctional_CYPOR, These bifunctional pr 1e-95
PRK06214530 PRK06214, PRK06214, sulfite reductase; Provisional 8e-92
cd06182267 cd06182, CYPOR_like, NADPH cytochrome p450 reducta 1e-85
PRK10953600 PRK10953, cysJ, sulfite reductase subunit alpha; P 3e-74
cd06200245 cd06200, SiR_like1, Cytochrome p450- like alpha su 2e-36
cd00322223 cd00322, FNR_like, Ferredoxin reductase (FNR), an 1e-30
cd06201289 cd06201, SiR_like2, Cytochrome p450- like alpha su 1e-29
cd06208286 cd06208, CYPOR_like_FNR, These ferredoxin reductas 2e-29
pfam00258142 pfam00258, Flavodoxin_1, Flavodoxin 8e-23
pfam00175106 pfam00175, NAD_binding_1, Oxidoreductase NAD-bindi 5e-19
PLN03116307 PLN03116, PLN03116, ferredoxin--NADP+ reductase; P 1e-16
TIGR03224411 TIGR03224, benzo_boxA, benzoyl-CoA oxygenase/reduc 5e-12
PLN03115367 PLN03115, PLN03115, ferredoxin--NADP(+) reductase; 5e-10
cd06211238 cd06211, phenol_2-monooxygenase_like, Phenol 2-mon 6e-07
PRK08105149 PRK08105, PRK08105, flavodoxin; Provisional 7e-07
cd06182267 cd06182, CYPOR_like, NADPH cytochrome p450 reducta 6e-06
COG0543252 COG0543, UbiB, 2-polyprenylphenol hydroxylase and 1e-05
cd06216243 cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur bi 4e-05
COG4097438 COG4097, COG4097, Predicted ferric reductase [Inor 4e-05
cd06209228 cd06209, BenDO_FAD_NAD, Benzoate dioxygenase reduc 5e-05
cd06195241 cd06195, FNR1, Ferredoxin-NADP+ (oxido)reductase i 1e-04
PRK09004146 PRK09004, PRK09004, FMN-binding protein MioC; Prov 2e-04
cd06184247 cd06184, flavohem_like_fad_nad_binding, FAD_NAD(P) 0.002
cd06187224 cd06187, O2ase_reductase_like, The oxygenase reduc 0.002
COG1018266 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NA 0.004
>gnl|CDD|99801 cd06204, CYPOR, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information 
 Score =  616 bits (1590), Expect = 0.0
 Identities = 211/424 (49%), Positives = 278/424 (65%), Gaps = 27/424 (6%)

Query: 151 DAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEAL 210
           DA++P  + VAV +EL T S DRSC H+EFDI+G+G+ Y+TGDH+ V+  N SE VE  L
Sbjct: 1   DAKNPFLAPVAVSRELFTGS-DRSCLHIEFDISGSGIRYQTGDHLAVWPTNPSEEVERLL 59

Query: 211 SLLGLS-PDTYFSLHTDKEDGTPLGKSTLPPTFP-PCSLRTALTKYADLLSSPKKSALLA 268
            +LGL   DT  SL +  E       ++    FP P + RTAL  Y D+ +   +  L A
Sbjct: 60  KVLGLDDRDTVISLKSLDEP------ASKKVPFPCPTTYRTALRHYLDITAPVSRQVLAA 113

Query: 269 LAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKP--PLGVFFAAI 326
           LA  A DP E +RL  LAS  GKDEYA+WIV   R+LLEV+ +FPSAKP  P   F   +
Sbjct: 114 LAQFAPDPEEKERLLKLAS-EGKDEYAKWIVEPHRNLLEVLQDFPSAKPTPPPFDFLIEL 172

Query: 327 VPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPME------ 380
           +PRLQPRYYSISSS +V P+RIH+T  +V   TPTGR+ KG+ + W+    P        
Sbjct: 173 LPRLQPRYYSISSSSKVHPNRIHITAVVVKYPTPTGRIIKGVATNWLLALKPALNGEKPP 232

Query: 381 ---------KSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQE 431
                    K    S  P+FVR+SNF+LP     P+IMIGPGTG+APFRGF+QER AL+E
Sbjct: 233 TPYYLSGPRKKGGGSKVPVFVRRSNFRLPTKPSTPVIMIGPGTGVAPFRGFIQERAALKE 292

Query: 432 AGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEK 491
           +G ++GP+LLFFGCR+   D+IY+DEL  + + G L +L+ AFSRE P K YVQH++ E 
Sbjct: 293 SGKKVGPTLLFFGCRHPDEDFIYKDELEEYAKLGGLLELVTAFSREQPKKVYVQHRLAEH 352

Query: 492 SSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYL 551
           +  +W +++EGAY+YVCGDAK+MARDV +TL  I+ EQG +  ++AE  VK L+  GRY 
Sbjct: 353 AEQVWELINEGAYIYVCGDAKNMARDVEKTLLEILAEQGGMTETEAEEYVKKLKTRGRYQ 412

Query: 552 RDVW 555
            DVW
Sbjct: 413 EDVW 416

CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH. Length = 416
>gnl|CDD|223446 COG0369, CysJ, Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|99803 cd06207, CyPoR_like, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>gnl|CDD|99796 cd06199, SiR, Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>gnl|CDD|99800 cd06203, methionine_synthase_red, Human methionine synthase reductase (MSR) restores methionine sythase which is responsible for the regeneration of methionine from homocysteine, as well as the coversion of methyltetrahydrofolate to tetrahydrofolate Back     alignment and domain information
>gnl|CDD|99799 cd06202, Nitric_oxide_synthase, The ferredoxin-reductase (FNR) like C-terminal domain of the nitric oxide synthase (NOS) fuses with a heme-containing N-terminal oxidase domain Back     alignment and domain information
>gnl|CDD|216051 pfam00667, FAD_binding_1, FAD binding domain Back     alignment and domain information
>gnl|CDD|233643 TIGR01931, cysJ, sulfite reductase [NADPH] flavoprotein, alpha-component Back     alignment and domain information
>gnl|CDD|99802 cd06206, bifunctional_CYPOR, These bifunctional proteins fuse N-terminal cytochrome p450 with a cytochrome p450 reductase (CYPOR) Back     alignment and domain information
>gnl|CDD|235745 PRK06214, PRK06214, sulfite reductase; Provisional Back     alignment and domain information
>gnl|CDD|99779 cd06182, CYPOR_like, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>gnl|CDD|182862 PRK10953, cysJ, sulfite reductase subunit alpha; Provisional Back     alignment and domain information
>gnl|CDD|99797 cd06200, SiR_like1, Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>gnl|CDD|99778 cd00322, FNR_like, Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I Back     alignment and domain information
>gnl|CDD|99798 cd06201, SiR_like2, Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>gnl|CDD|99804 cd06208, CYPOR_like_FNR, These ferredoxin reductases are related to the NADPH cytochrome p450 reductases (CYPOR), but lack the FAD-binding region connecting sub-domain Back     alignment and domain information
>gnl|CDD|215823 pfam00258, Flavodoxin_1, Flavodoxin Back     alignment and domain information
>gnl|CDD|215769 pfam00175, NAD_binding_1, Oxidoreductase NAD-binding domain Back     alignment and domain information
>gnl|CDD|215586 PLN03116, PLN03116, ferredoxin--NADP+ reductase; Provisional Back     alignment and domain information
>gnl|CDD|132268 TIGR03224, benzo_boxA, benzoyl-CoA oxygenase/reductase, BoxA protein Back     alignment and domain information
>gnl|CDD|215585 PLN03115, PLN03115, ferredoxin--NADP(+) reductase; Provisional Back     alignment and domain information
>gnl|CDD|99807 cd06211, phenol_2-monooxygenase_like, Phenol 2-monooxygenase (phenol hydroxylase) is a flavoprotein monooxygenase, able to use molecular oxygen as a substrate in the microbial degredation of phenol Back     alignment and domain information
>gnl|CDD|181230 PRK08105, PRK08105, flavodoxin; Provisional Back     alignment and domain information
>gnl|CDD|99779 cd06182, CYPOR_like, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>gnl|CDD|223617 COG0543, UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>gnl|CDD|99812 cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>gnl|CDD|226582 COG4097, COG4097, Predicted ferric reductase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|99805 cd06209, BenDO_FAD_NAD, Benzoate dioxygenase reductase (BenDO) FAD/NAD binding domain Back     alignment and domain information
>gnl|CDD|99792 cd06195, FNR1, Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin Back     alignment and domain information
>gnl|CDD|181608 PRK09004, PRK09004, FMN-binding protein MioC; Provisional Back     alignment and domain information
>gnl|CDD|99781 cd06184, flavohem_like_fad_nad_binding, FAD_NAD(P)H binding domain of flavohemoglobin Back     alignment and domain information
>gnl|CDD|99784 cd06187, O2ase_reductase_like, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant Back     alignment and domain information
>gnl|CDD|223949 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 555
KOG1159574 consensus NADP-dependent flavoprotein reductase [E 100.0
KOG1158645 consensus NADP/FAD dependent oxidoreductase [Energ 100.0
PRK10953600 cysJ sulfite reductase subunit alpha; Provisional 100.0
TIGR01931597 cysJ sulfite reductase [NADPH] flavoprotein, alpha 100.0
COG0369587 CysJ Sulfite reductase, alpha subunit (flavoprotei 100.0
cd06204416 CYPOR NADPH cytochrome p450 reductase (CYPOR) serv 100.0
cd06203398 methionine_synthase_red Human methionine synthase 100.0
cd06207382 CyPoR_like NADPH cytochrome p450 reductase (CYPOR) 100.0
cd06202406 Nitric_oxide_synthase The ferredoxin-reductase (FN 100.0
cd06206384 bifunctional_CYPOR These bifunctional proteins fus 100.0
cd06199360 SiR Cytochrome p450- like alpha subunits of E. col 100.0
PRK06214530 sulfite reductase; Provisional 100.0
PF00667219 FAD_binding_1: FAD binding domain; InterPro: IPR00 100.0
PLN03115367 ferredoxin--NADP(+) reductase; Provisional 100.0
cd06182267 CYPOR_like NADPH cytochrome p450 reductase (CYPOR) 100.0
cd06201289 SiR_like2 Cytochrome p450- like alpha subunits of 100.0
cd06200245 SiR_like1 Cytochrome p450- like alpha subunits of 100.0
TIGR03224411 benzo_boxA benzoyl-CoA oxygenase/reductase, BoxA p 100.0
PLN03116307 ferredoxin--NADP+ reductase; Provisional 100.0
cd06208286 CYPOR_like_FNR These ferredoxin reductases are rel 100.0
PRK05723151 flavodoxin; Provisional 99.93
PRK09004146 FMN-binding protein MioC; Provisional 99.91
cd00322223 FNR_like Ferredoxin reductase (FNR), an FAD and NA 99.91
cd06188283 NADH_quinone_reductase Na+-translocating NADH:quin 99.91
cd06189224 flavin_oxioreductase NAD(P)H dependent flavin oxid 99.91
PRK08105149 flavodoxin; Provisional 99.91
PRK08051232 fre FMN reductase; Validated 99.9
PRK10926248 ferredoxin-NADP reductase; Provisional 99.9
PRK07609339 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validat 99.9
cd06211238 phenol_2-monooxygenase_like Phenol 2-monooxygenase 99.9
cd06190232 T4MO_e_transfer_like Toluene-4-monoxygenase electr 99.9
cd06195241 FNR1 Ferredoxin-NADP+ (oxido)reductase is an FAD-c 99.9
PRK05464409 Na(+)-translocating NADH-quinone reductase subunit 99.9
cd06209228 BenDO_FAD_NAD Benzoate dioxygenase reductase (BenD 99.9
PRK11872340 antC anthranilate dioxygenase reductase; Provision 99.89
cd06187224 O2ase_reductase_like The oxygenase reductase FAD/N 99.89
TIGR01941405 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translo 99.89
PRK08345289 cytochrome-c3 hydrogenase subunit gamma; Provision 99.89
cd06210236 MMO_FAD_NAD_binding Methane monooxygenase (MMO) re 99.89
PRK13289399 bifunctional nitric oxide dioxygenase/dihydropteri 99.89
PRK10684332 HCP oxidoreductase, NADH-dependent; Provisional 99.89
cd06212232 monooxygenase_like The oxygenase reductase FAD/NAD 99.89
cd06191231 FNR_iron_sulfur_binding Iron-sulfur binding Ferred 99.88
cd06194222 FNR_N-term_Iron_sulfur_binding Iron-sulfur binding 99.88
PRK05713312 hypothetical protein; Provisional 99.88
cd06213227 oxygenase_e_transfer_subunit The oxygenase reducta 99.88
cd06221253 sulfite_reductase_like Anaerobic sulfite reductase 99.87
cd06184247 flavohem_like_fad_nad_binding FAD_NAD(P)H binding 99.87
cd06216243 FNR_iron_sulfur_binding_2 Iron-sulfur binding ferr 99.86
TIGR02160352 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, 99.86
cd06215231 FNR_iron_sulfur_binding_1 Iron-sulfur binding ferr 99.86
cd06198216 FNR_like_3 NAD(P) binding domain of ferredoxin red 99.86
cd06218246 DHOD_e_trans FAD/NAD binding domain in the electro 99.85
cd06214241 PA_degradation_oxidoreductase_like NAD(P) binding 99.85
PRK08221263 anaerobic sulfite reductase subunit B; Provisional 99.85
cd06196218 FNR_like_1 Ferredoxin reductase-like proteins cata 99.85
cd06217235 FNR_iron_sulfur_binding_3 Iron-sulfur binding ferr 99.85
PTZ00274325 cytochrome b5 reductase; Provisional 99.85
COG1018266 Hmp Flavodoxin reductases (ferredoxin-NADPH reduct 99.85
cd06183234 cyt_b5_reduct_like Cytochrome b5 reductase catalyz 99.85
TIGR02911261 sulfite_red_B sulfite reductase, subunit B. Member 99.84
cd06185211 PDR_like Phthalate dioxygenase reductase (PDR) is 99.84
PTZ00319300 NADH-cytochrome B5 reductase; Provisional 99.83
cd06197220 FNR_like_2 FAD/NAD(P) binding domain of ferredoxin 99.83
COG2871410 NqrF Na+-transporting NADH:ubiquinone oxidoreducta 99.82
PRK00054250 dihydroorotate dehydrogenase electron transfer sub 99.82
COG0543252 UbiB 2-polyprenylphenol hydroxylase and related fl 99.82
cd06220233 DHOD_e_trans_like2 FAD/NAD binding domain in the e 99.82
cd06192243 DHOD_e_trans_like FAD/NAD binding domain (electron 99.81
cd06219248 DHOD_e_trans_like1 FAD/NAD binding domain in the e 99.8
PRK06222281 ferredoxin-NADP(+) reductase subunit alpha; Review 99.8
PRK05802320 hypothetical protein; Provisional 99.78
PLN02252888 nitrate reductase [NADPH] 99.76
KOG0534286 consensus NADH-cytochrome b-5 reductase [Coenzyme 99.76
COG4097438 Predicted ferric reductase [Inorganic ion transpor 99.75
PTZ003061167 NADH-dependent fumarate reductase; Provisional 99.72
PF00258143 Flavodoxin_1: Flavodoxin; InterPro: IPR008254 This 99.71
PF00175109 NAD_binding_1: Oxidoreductase NAD-binding domain ; 99.71
PRK12778 752 putative bifunctional 2-polyprenylphenol hydroxyla 99.69
cd06186210 NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyz 99.66
cd06193235 siderophore_interacting Siderophore interacting pr 99.65
PRK12779944 putative bifunctional glutamate synthase subunit b 99.63
PRK07308146 flavodoxin; Validated 99.56
PRK12775 1006 putative trifunctional 2-polyprenylphenol hydroxyl 99.55
KOG1160601 consensus Fe-S oxidoreductase [Energy production a 99.51
PLN02292 702 ferric-chelate reductase 99.42
PRK12359172 flavodoxin FldB; Provisional 99.41
PRK06703151 flavodoxin; Provisional 99.41
PLN02844 722 oxidoreductase/ferric-chelate reductase 99.39
PLN02631 699 ferric-chelate reductase 99.36
PRK09271160 flavodoxin; Provisional 99.21
TIGR01752167 flav_long flavodoxin, long chain. Flavodoxins are 99.2
TIGR01754140 flav_RNR ribonucleotide reductase-associated flavo 99.16
TIGR01753140 flav_short flavodoxin, short chain. Flavodoxins ar 99.14
COG0716151 FldA Flavodoxins [Energy production and conversion 99.11
PRK06756148 flavodoxin; Provisional 99.1
TIGR00333125 nrdI ribonucleoside-diphosphate reductase 2, opero 99.04
PRK09267169 flavodoxin FldA; Validated 98.86
KOG3378385 consensus Globins and related hemoproteins [Energy 98.85
PF08030156 NAD_binding_6: Ferric reductase NAD binding domain 98.67
PRK03600134 nrdI ribonucleotide reductase stimulatory protein; 98.6
PRK02551154 flavoprotein NrdI; Provisional 98.38
KOG0039646 consensus Ferric reductase, NADH/NADPH oxidase and 98.16
PRK11921394 metallo-beta-lactamase/flavodoxin domain-containin 97.87
PRK065671028 putative bifunctional glutamate synthase subunit b 97.85
PRK05452479 anaerobic nitric oxide reductase flavorubredoxin; 97.36
PF07972122 Flavodoxin_NdrI: NrdI Flavodoxin like ; InterPro: 97.31
PRK05568142 flavodoxin; Provisional 97.2
PF0097099 FAD_binding_6: Oxidoreductase FAD-binding domain; 97.11
PRK05569141 flavodoxin; Provisional 96.9
PRK06242150 flavodoxin; Provisional 96.65
COG1780141 NrdI Protein involved in ribonucleotide reduction 96.55
PRK07116160 flavodoxin; Provisional 94.37
TIGR01755197 flav_wrbA NAD(P)H:quinone oxidoreductase, type IV. 94.23
PRK03767200 NAD(P)H:quinone oxidoreductase; Provisional 93.53
COG2375265 ViuB Siderophore-interacting protein [Inorganic io 92.6
KOG0560 638 consensus Sulfite reductase (ferredoxin) [Inorgani 92.45
TIGR03567171 FMN_reduc_SsuE FMN reductase, SsuE family. Members 89.63
PF03358152 FMN_red: NADPH-dependent FMN reductase; InterPro: 89.27
PRK10569191 NAD(P)H-dependent FMN reductase; Provisional 89.21
PRK11104177 hemG protoporphyrinogen oxidase; Provisional 87.19
TIGR03566174 FMN_reduc_MsuE FMN reductase, MsuE subfamily. Memb 81.69
PF12724143 Flavodoxin_5: Flavodoxin domain 81.01
PRK13556208 azoreductase; Provisional 80.59
>KOG1159 consensus NADP-dependent flavoprotein reductase [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=4.5e-109  Score=835.74  Aligned_cols=521  Identities=32%  Similarity=0.591  Sum_probs=450.5

Q ss_pred             eEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008747            2 KIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD   81 (555)
Q Consensus         2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d~   81 (555)
                      .|||||||+|+|+.|+||++||++|.+.+.+.+.|++++|||||||||+|++||.++|++++||.+|||+.++++|+||+
T Consensus        50 ~vvFVcSTTGqGe~P~Nmk~~WrfL~rknLps~~L~~~~~AvlGLGDSsY~KfNy~aKKL~~RL~qLGA~~~~~~glgDd  129 (574)
T KOG1159|consen   50 LVVFVCSTTGQGEEPDNMKKFWRFLLRKNLPSTILQHMQFAVLGLGDSSYPKFNYAAKKLHRRLRQLGANSVCPRGLGDD  129 (574)
T ss_pred             eEEEEEecCCCCCCCccHHHHHHHHhhccchHHHHhhhhheeeecCcccchhhhHHHHHHHHHHHHhCcccccccccccc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CC--CchhhHHHHHHHHHHHHHhhhCCCCCCCCcCCCccccccceEEEEecCCCccccccccCCCCCCcccCCCCCeeeE
Q 008747           82 DQ--CIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYDNADASVGEKSWGNANGHAVYDAQHPCRSN  159 (555)
Q Consensus        82 ~~--~~~~~~~~W~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (555)
                      +.  |.+.+|.+|...+|+.|....++..+.....++ ......+++-....+      ...+.  .......+....++
T Consensus       130 Qh~~G~eg~~~pW~~~lw~~L~~i~~p~~~~t~l~~~-~~~~~k~~~l~~~~~------~~~~d--~~~v~~~~~~~~~k  200 (574)
T KOG1159|consen  130 QHEEGIEGVFDPWLKELWSYLKGIYPPYRPETDLIPT-VQITTKYSLLELGKA------SDFSD--SDIVLEPQGQIPAK  200 (574)
T ss_pred             cccccchhhhHHHHHHHHHHHHhhcCCCCCcccCCCc-ccccchhhhhhcccc------ccCCc--chhhhccccccccc
Confidence            64  899999999999999999987632111011111 111222222111111      00100  00011111112378


Q ss_pred             EEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCCCCCCCCCCCC
Q 008747          160 VAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLP  239 (555)
Q Consensus       160 v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N~~~~V~~~l~~l~l~~~~~~~i~~~~~~~~~~~~~~~~  239 (555)
                      ++.|+++|+.+|+++|+|++|++.++...|+|||++.|+|.|+++.|+++++.+||++++...+.....+    .+...|
T Consensus       201 ~~~N~rlT~~~HfQDVR~~~F~i~~s~~~~epGDvl~l~P~N~de~V~~Fie~~gl~~~~~~~l~~~s~~----~~~~~~  276 (574)
T KOG1159|consen  201 LVENRRLTSADHFQDVRLFEFDIPDSYEEFEPGDVLSLLPSNSDETVQRFIEYLGLDEDQLKPLKISSND----RSSPLP  276 (574)
T ss_pred             hhcceeecCcchhheeeEEEEecCCccccccCCCEEEEecCCchHHHHHHHHHcCCChhhccccccccCc----cccccc
Confidence            9999999999999999999999999899999999999999999999999999999999876655432211    112222


Q ss_pred             CCCC-cchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHHHhhCCCCCCC
Q 008747          240 PTFP-PCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPP  318 (555)
Q Consensus       240 ~~~p-~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~dvl~~f~s~~~p  318 (555)
                       -+| |+|+++++++|+|+++.|+++||..|+.|++|++||++|++++|++|.++|.+|+.+++||++|+|++|++.++|
T Consensus       277 -~~~~p~sl~~~lk~~~D~~SvPrrsFFe~l~~~s~~~~EkEkL~efas~qg~ddl~dY~nRpRRtilEvLeDF~sv~lp  355 (574)
T KOG1159|consen  277 -LLPNPLSLLNLLKYVLDFNSVPRRSFFEMLAHFSTDEMEKEKLQEFASAQGIDDLYDYVNRPRRTILEVLEDFRSVKLP  355 (574)
T ss_pred             -ccCCchhHHHHHHHhcccccCcchHHHHHHHHHccChHHHHHHHHhccccchHHHHHHhcchhhhHHHHHHhchhccCC
Confidence             467 999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHhcCCCcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhccCCCCcCCCCceeeEEEecCCCC
Q 008747          319 LGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFK  398 (555)
Q Consensus       319 ~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~v~v~~~~~~F~  398 (555)
                      ++++++.+ |.++||+|||||+|..+  .++|+|++|.++|.....|.|+||+||.++.+++      .+++.+++|++.
T Consensus       356 ~~yl~d~~-P~IrPR~fSIas~~~~~--~leL~VAiV~ykT~l~~pRrGlCS~wl~sL~~g~------~i~~~v~~g~l~  426 (574)
T KOG1159|consen  356 IDYLLDLL-PVIRPRAFSIASSPGAH--HLELLVAIVEYKTILKEPRRGLCSNWLASLKPGD------EIPIKVRPGTLY  426 (574)
T ss_pred             HHHHHHhc-cccccceeeeccCCCCC--ceeEEEEEEEEeeeccccccchhHHHHhhcCCCC------eEEEEEecCccc
Confidence            99999765 99999999999999854  4999999999999999999999999999998865      378999999999


Q ss_pred             CCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceEEEEEccCC
Q 008747          399 LPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREG  478 (555)
Q Consensus       399 lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~Sr~~  478 (555)
                      +|.+.+.|+||||+|||||||||++++|..++.     .+..||||||+++.||+|.+||.+..+.+.    +.|||||+
T Consensus       427 ~p~~~~~PlImVGPGTGvAPfRa~i~er~~q~~-----~~~~lFfGCR~K~~Df~y~~eW~~~~~~~~----~~AFSRDq  497 (574)
T KOG1159|consen  427 FPSDLNKPLIMVGPGTGVAPFRALIQERIYQGD-----KENVLFFGCRNKDKDFLYEDEWTELNKRAF----HTAFSRDQ  497 (574)
T ss_pred             cCCCCCCCeEEEcCCCCcccHHHHHHHHHhhcc-----CCceEEEecccCCccccccchhhhhhcchh----hhhccccc
Confidence            999889999999999999999999999987432     456999999999999999999998887654    45999999


Q ss_pred             CCcccccchhhccHHHHHHHH-hCCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCEEEeeC
Q 008747          479 PTKEYVQHKMMEKSSDIWNML-SEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW  555 (555)
Q Consensus       479 ~~k~yVq~~l~~~~~~v~~~l-~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dvw  555 (555)
                      ++|.||||.|+++++.+|+++ +.++.|||||++..|..+|.++|.+|+.+.++.+.|.|. |++.|++.+||+.|+|
T Consensus       498 e~kvYVQh~i~e~g~~v~~Ll~~~gA~~fvaGsS~~MP~~V~~al~eI~~~e~g~~~e~a~-~l~~lekt~ryq~ETW  574 (574)
T KOG1159|consen  498 EQKVYVQHKIRENGEEVWDLLDNLGAYFFVAGSSGKMPKDVKEALIEIVGKEGGFSKEVAS-YLKALEKTRRYQQETW  574 (574)
T ss_pred             ccceeHHHHHHHhhHHHHHHHhccCCEEEEecCCCCCcHHHHHHHHHHhhhhcCCChHHHH-HHHHHHHhccccccCC
Confidence            999999999999999999988 589999999999999999999999999999999887777 9999999999999999

>KOG1158 consensus NADP/FAD dependent oxidoreductase [Energy production and conversion] Back     alignment and domain information
>PRK10953 cysJ sulfite reductase subunit alpha; Provisional Back     alignment and domain information
>TIGR01931 cysJ sulfite reductase [NADPH] flavoprotein, alpha-component Back     alignment and domain information
>COG0369 CysJ Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd06204 CYPOR NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>cd06203 methionine_synthase_red Human methionine synthase reductase (MSR) restores methionine sythase which is responsible for the regeneration of methionine from homocysteine, as well as the coversion of methyltetrahydrofolate to tetrahydrofolate Back     alignment and domain information
>cd06207 CyPoR_like NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>cd06202 Nitric_oxide_synthase The ferredoxin-reductase (FNR) like C-terminal domain of the nitric oxide synthase (NOS) fuses with a heme-containing N-terminal oxidase domain Back     alignment and domain information
>cd06206 bifunctional_CYPOR These bifunctional proteins fuse N-terminal cytochrome p450 with a cytochrome p450 reductase (CYPOR) Back     alignment and domain information
>cd06199 SiR Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>PRK06214 sulfite reductase; Provisional Back     alignment and domain information
>PF00667 FAD_binding_1: FAD binding domain; InterPro: IPR003097 This domain is found in sulphite reductase, NADPH cytochrome P450 reductase, nitric oxide synthase and methionine synthase reductase Back     alignment and domain information
>PLN03115 ferredoxin--NADP(+) reductase; Provisional Back     alignment and domain information
>cd06182 CYPOR_like NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>cd06201 SiR_like2 Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>cd06200 SiR_like1 Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>TIGR03224 benzo_boxA benzoyl-CoA oxygenase/reductase, BoxA protein Back     alignment and domain information
>PLN03116 ferredoxin--NADP+ reductase; Provisional Back     alignment and domain information
>cd06208 CYPOR_like_FNR These ferredoxin reductases are related to the NADPH cytochrome p450 reductases (CYPOR), but lack the FAD-binding region connecting sub-domain Back     alignment and domain information
>PRK05723 flavodoxin; Provisional Back     alignment and domain information
>PRK09004 FMN-binding protein MioC; Provisional Back     alignment and domain information
>cd00322 FNR_like Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I Back     alignment and domain information
>cd06188 NADH_quinone_reductase Na+-translocating NADH:quinone oxidoreductase (Na+-NQR) FAD/NADH binding domain Back     alignment and domain information
>cd06189 flavin_oxioreductase NAD(P)H dependent flavin oxidoreductases use flavin as a substrate in mediating electron transfer from iron complexes or iron proteins Back     alignment and domain information
>PRK08105 flavodoxin; Provisional Back     alignment and domain information
>PRK08051 fre FMN reductase; Validated Back     alignment and domain information
>PRK10926 ferredoxin-NADP reductase; Provisional Back     alignment and domain information
>PRK07609 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated Back     alignment and domain information
>cd06211 phenol_2-monooxygenase_like Phenol 2-monooxygenase (phenol hydroxylase) is a flavoprotein monooxygenase, able to use molecular oxygen as a substrate in the microbial degredation of phenol Back     alignment and domain information
>cd06190 T4MO_e_transfer_like Toluene-4-monoxygenase electron transfer component of Pseudomonas mendocina hydroxylates toluene and forms p-cresol as part of a three component toluene-4-monoxygenase system Back     alignment and domain information
>cd06195 FNR1 Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin Back     alignment and domain information
>PRK05464 Na(+)-translocating NADH-quinone reductase subunit F; Provisional Back     alignment and domain information
>cd06209 BenDO_FAD_NAD Benzoate dioxygenase reductase (BenDO) FAD/NAD binding domain Back     alignment and domain information
>PRK11872 antC anthranilate dioxygenase reductase; Provisional Back     alignment and domain information
>cd06187 O2ase_reductase_like The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant Back     alignment and domain information
>TIGR01941 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit Back     alignment and domain information
>PRK08345 cytochrome-c3 hydrogenase subunit gamma; Provisional Back     alignment and domain information
>cd06210 MMO_FAD_NAD_binding Methane monooxygenase (MMO) reductase of methanotrophs catalyzes the NADH-dependent hydroxylation of methane to methanol Back     alignment and domain information
>PRK13289 bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2; Provisional Back     alignment and domain information
>PRK10684 HCP oxidoreductase, NADH-dependent; Provisional Back     alignment and domain information
>cd06212 monooxygenase_like The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons Back     alignment and domain information
>cd06191 FNR_iron_sulfur_binding Iron-sulfur binding Ferredoxin Reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with a C-terminal iron-sulfur binding cluster domain Back     alignment and domain information
>cd06194 FNR_N-term_Iron_sulfur_binding Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an N-terminal Iron-Sulfur binding cluster domain Back     alignment and domain information
>PRK05713 hypothetical protein; Provisional Back     alignment and domain information
>cd06213 oxygenase_e_transfer_subunit The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons Back     alignment and domain information
>cd06221 sulfite_reductase_like Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases Back     alignment and domain information
>cd06184 flavohem_like_fad_nad_binding FAD_NAD(P)H binding domain of flavohemoglobin Back     alignment and domain information
>cd06216 FNR_iron_sulfur_binding_2 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>TIGR02160 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, PaaK subunit Back     alignment and domain information
>cd06215 FNR_iron_sulfur_binding_1 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>cd06198 FNR_like_3 NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) domain, which varies in orientation with respect to the NAD(P) binding domain Back     alignment and domain information
>cd06218 DHOD_e_trans FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase Back     alignment and domain information
>cd06214 PA_degradation_oxidoreductase_like NAD(P) binding domain of ferredoxin reductase like phenylacetic acid (PA) degradation oxidoreductase Back     alignment and domain information
>PRK08221 anaerobic sulfite reductase subunit B; Provisional Back     alignment and domain information
>cd06196 FNR_like_1 Ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which varies in orientation with respect to the NAD(P) binding domain Back     alignment and domain information
>cd06217 FNR_iron_sulfur_binding_3 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>PTZ00274 cytochrome b5 reductase; Provisional Back     alignment and domain information
>COG1018 Hmp Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] Back     alignment and domain information
>cd06183 cyt_b5_reduct_like Cytochrome b5 reductase catalyzes the reduction of 2 molecules of cytochrome b5 using NADH as an electron donor Back     alignment and domain information
>TIGR02911 sulfite_red_B sulfite reductase, subunit B Back     alignment and domain information
>cd06185 PDR_like Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster Back     alignment and domain information
>PTZ00319 NADH-cytochrome B5 reductase; Provisional Back     alignment and domain information
>cd06197 FNR_like_2 FAD/NAD(P) binding domain of ferredoxin reductase-like proteins Back     alignment and domain information
>COG2871 NqrF Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF [Energy production and conversion] Back     alignment and domain information
>PRK00054 dihydroorotate dehydrogenase electron transfer subunit; Reviewed Back     alignment and domain information
>COG0543 UbiB 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>cd06220 DHOD_e_trans_like2 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>cd06192 DHOD_e_trans_like FAD/NAD binding domain (electron transfer subunit) of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>cd06219 DHOD_e_trans_like1 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>PRK06222 ferredoxin-NADP(+) reductase subunit alpha; Reviewed Back     alignment and domain information
>PRK05802 hypothetical protein; Provisional Back     alignment and domain information
>PLN02252 nitrate reductase [NADPH] Back     alignment and domain information
>KOG0534 consensus NADH-cytochrome b-5 reductase [Coenzyme transport and metabolism; Energy production and conversion] Back     alignment and domain information
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PTZ00306 NADH-dependent fumarate reductase; Provisional Back     alignment and domain information
>PF00258 Flavodoxin_1: Flavodoxin; InterPro: IPR008254 This domain is found in a number of proteins including flavodoxin and nitric-oxide synthase Back     alignment and domain information
>PF00175 NAD_binding_1: Oxidoreductase NAD-binding domain ; InterPro: IPR001433 Bacterial ferredoxin-NADP+ reductase may be bound to the thylakoid membrane or anchored to the thylakoid-bound phycobilisomes Back     alignment and domain information
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>cd06186 NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide Back     alignment and domain information
>cd06193 siderophore_interacting Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family Back     alignment and domain information
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional Back     alignment and domain information
>PRK07308 flavodoxin; Validated Back     alignment and domain information
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional Back     alignment and domain information
>KOG1160 consensus Fe-S oxidoreductase [Energy production and conversion] Back     alignment and domain information
>PLN02292 ferric-chelate reductase Back     alignment and domain information
>PRK12359 flavodoxin FldB; Provisional Back     alignment and domain information
>PRK06703 flavodoxin; Provisional Back     alignment and domain information
>PLN02844 oxidoreductase/ferric-chelate reductase Back     alignment and domain information
>PLN02631 ferric-chelate reductase Back     alignment and domain information
>PRK09271 flavodoxin; Provisional Back     alignment and domain information
>TIGR01752 flav_long flavodoxin, long chain Back     alignment and domain information
>TIGR01754 flav_RNR ribonucleotide reductase-associated flavodoxin, putative Back     alignment and domain information
>TIGR01753 flav_short flavodoxin, short chain Back     alignment and domain information
>COG0716 FldA Flavodoxins [Energy production and conversion] Back     alignment and domain information
>PRK06756 flavodoxin; Provisional Back     alignment and domain information
>TIGR00333 nrdI ribonucleoside-diphosphate reductase 2, operon protein nrdI Back     alignment and domain information
>PRK09267 flavodoxin FldA; Validated Back     alignment and domain information
>KOG3378 consensus Globins and related hemoproteins [Energy production and conversion] Back     alignment and domain information
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins Back     alignment and domain information
>PRK03600 nrdI ribonucleotide reductase stimulatory protein; Reviewed Back     alignment and domain information
>PRK02551 flavoprotein NrdI; Provisional Back     alignment and domain information
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional Back     alignment and domain information
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated Back     alignment and domain information
>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional Back     alignment and domain information
>PF07972 Flavodoxin_NdrI: NrdI Flavodoxin like ; InterPro: IPR004465 Ribonucleotide reductases (RNRs) are enzymes that provide the precursors of DNA synthesis Back     alignment and domain information
>PRK05568 flavodoxin; Provisional Back     alignment and domain information
>PF00970 FAD_binding_6: Oxidoreductase FAD-binding domain; InterPro: IPR008333 These sequences contain an oxidoreductase FAD-binding domain Back     alignment and domain information
>PRK05569 flavodoxin; Provisional Back     alignment and domain information
>PRK06242 flavodoxin; Provisional Back     alignment and domain information
>COG1780 NrdI Protein involved in ribonucleotide reduction [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK07116 flavodoxin; Provisional Back     alignment and domain information
>TIGR01755 flav_wrbA NAD(P)H:quinone oxidoreductase, type IV Back     alignment and domain information
>PRK03767 NAD(P)H:quinone oxidoreductase; Provisional Back     alignment and domain information
>COG2375 ViuB Siderophore-interacting protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0560 consensus Sulfite reductase (ferredoxin) [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR03567 FMN_reduc_SsuE FMN reductase, SsuE family Back     alignment and domain information
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1 Back     alignment and domain information
>PRK10569 NAD(P)H-dependent FMN reductase; Provisional Back     alignment and domain information
>PRK11104 hemG protoporphyrinogen oxidase; Provisional Back     alignment and domain information
>TIGR03566 FMN_reduc_MsuE FMN reductase, MsuE subfamily Back     alignment and domain information
>PF12724 Flavodoxin_5: Flavodoxin domain Back     alignment and domain information
>PRK13556 azoreductase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query555
3qe2_A618 Crystal Structure Of Human Nadph-Cytochrome P450 Re 1e-112
3qfr_A618 Crystal Structure Of Human Nadph-Cytochrome P450 Re 1e-112
3qfc_A618 Crystal Structure Of Human Nadph-Cytochrome P450 (V 1e-111
1amo_A615 Three-Dimensional Structure Of Nadph-Cytochrome P45 1e-111
3es9_A618 Nadph-Cytochrome P450 Reductase In An Open Conforma 1e-110
1j9z_A622 Cypor-W677g Length = 622 1e-110
1ja0_A620 Cypor-W677x Length = 620 1e-110
1ja1_A622 Cypor-Triple Mutant Length = 622 1e-109
3ojx_A622 Disulfide Crosslinked Cytochrome P450 Reductase Ina 1e-109
3fjo_A637 Structure Of Chimeric Yh Cpr Length = 637 1e-101
3qfs_A458 Crystal Structure Of Nadph-Cytochrome P450 Reductas 9e-87
3qft_A458 Crystal Structure Of Nadph-Cytochrome P450 Reductas 5e-86
2bpo_A682 Crystal Structure Of The Yeast Cpr Triple Mutant: D 9e-66
2bf4_A682 A Second Fmn-Binding Site In Yeast Nadph-Cytochrome 1e-65
1tll_A688 Crystal Structure Of Rat Neuronal Nitric-Oxide Synt 2e-60
2qtz_A539 Crystal Structure Of The Nadp+-Bound Fad-Containing 2e-53
4dqk_A391 Crystal Structure Of The Fad Binding Domain Of Cyto 2e-52
4dql_A393 Crystal Structure Of The Fad Binding Domain Of Cyto 3e-52
2qtl_A539 Crystal Structure Of The Fad-Containing Fnr-Like Mo 4e-52
1f20_A435 Crystal Structure Of Rat Neuronal Nitric-Oxide Synt 7e-51
1ddg_A374 Crystal Structure Of Sir-Fp60 Length = 374 2e-46
1b1c_A181 Crystal Structure Of The Fmn-Binding Domain Of Huma 2e-21
3lvb_A311 Crystal Structure Of The Ferredoxin:nadp+ Reductase 6e-12
3lo8_A311 Crystal Structure Of The Oxidized Form Of Ferredoxi 6e-12
1jb9_A316 Crystal Structure Of The Ferredoxin:nadp+ Reductase 7e-12
3vo1_A314 Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ 1e-10
2b5o_A402 Ferredoxin-nadp Reductase Length = 402 2e-10
3vo2_A310 Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ 2e-10
1gaq_A314 Crystal Structure Of The Complex Between Ferredoxin 4e-10
4af6_A308 Pea Fnr L268v Mutant Length = 308 3e-09
1qga_A308 Pea Fnr Y308w Mutant In Complex With Nadp+ Length = 3e-09
3mhp_A296 Fnr-Recruitment To The Thylakoid Length = 296 3e-09
1qg0_A308 Wild-type Pea Fnr Length = 308 4e-09
1qfy_A308 Pea Fnr Y308s Mutant In Complex With Nadp+ Length = 4e-09
1fnb_A314 Refined Crystal Structure Of Spinach Ferredoxin Red 2e-08
1sm4_A296 Crystal Structure Analysis Of The Ferredoxin-Nadp+ 2e-08
1bx1_A314 Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reducta 2e-08
1bx0_A314 Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reducta 2e-08
1frq_A314 Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reducta 2e-08
1w35_A304 Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W) Leng 3e-08
1quf_A304 X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+ 5e-08
1frn_A314 The Involvement Of Ser96 In The Catalytic Mechanism 6e-08
1bvy_F191 Complex Of The Heme And Fmn-Binding Domains Of The 6e-08
4af7_A308 Pea Fnr C266m Mutant Length = 308 6e-08
1ewy_A303 Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reduct 6e-08
1e64_A304 Ferredoxin:nadp+ Reductase Mutant With Lys 75 Repla 7e-08
2x3u_A303 Ferredoxin-Nadp Reductase Mutant With Tyr 303 Repla 7e-08
3hr4_A219 Human Inos Reductase And Calmodulin Complex Length 1e-07
1go2_A304 Structure Of Ferredoxin-nadp+ Reductase With Lys 72 1e-07
1e63_A304 Ferredoxin:nadp+ Reductase Mutant With Lys 75 Repla 1e-07
1que_A303 X-Ray Structure Of The Ferredoxin:nadp+ Reductase F 1e-07
1e62_A304 Ferredoxin:nadp+ Reductase Mutant With Lys 75 Repla 1e-07
1gr1_A303 Structure Of Ferredoxin-Nadp+ Reductase With Glu 13 1e-07
1gjr_A304 Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By 1e-07
1w34_A304 Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Lengt 1e-07
2xnc_A315 Crystal Structure Of An Engineered Ferredoxin Nadp 1e-07
1bjk_A295 Ferredoxin:nadp+ Reductase Mutant With Arg 264 Repl 1e-07
1qh0_A295 Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutat 1e-07
1b2r_A304 Ferredoxin-Nadp+ Reductase (Mutation: E 301 A) Leng 1e-07
1ogj_A303 Ferredoxin:nadp+ Reductase Mutant With Leu 263 Repl 1e-07
1qgy_A295 Ferredoxin:nadp+ Reductase Mutant With Lys 75 Repla 1e-07
1qgz_A295 Ferredoxin:nadp+ Reductase Mutant With Leu 78 Repla 1e-07
2bsa_A303 Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Compl 2e-07
1bqe_A295 Ferredoxin:nadp+ Reductase Mutant With Thr 155 Repl 2e-07
1h85_A295 Ferredoxin:nadp+ Reductase Mutant With Val 136 Repl 2e-07
2vyq_A304 Ferredoxin:nadp Reductase Mutant With Thr 155 Repla 3e-07
1ogi_A303 Ferredoxin:nadp+ Reductase Mutant With Thr 155 Repl 4e-07
1h42_A304 Ferredoxin:nadp+ Reductase Mutant With Thr 155 Repl 5e-07
2bmw_A304 Ferredoxin: Nadp+reductase Mutant With Thr 155 Repl 5e-07
2rc5_A314 Refined Structure Of Fnr From Leptospira Interrogan 8e-07
3jqq_A316 Crystal Structure Of The H286k Mutant Of Ferredoxin 3e-05
3jqp_A316 Crystal Structure Of The H286l Mutant Of Ferredoxin 4e-05
2ok7_A316 Ferredoxin-Nadp+ Reductase From Plasmodium Falcipar 4e-05
1ykg_A167 Solution Structure Of The Flavodoxin-Like Domain Fr 5e-04
2hna_A147 Solution Structure Of A Bacterial Apo-Flavodoxin Le 7e-04
>pdb|3QE2|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase Length = 618 Back     alignment and structure 
Iteration: 1

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/556 (39%), Positives = 324/556 (58%), Gaps = 29/556 (5%)
Query: 10  YGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQG 69
           YG+G+PTDNA  FY W  E       L  +K+ VFGLGN+ YEHFN + K VD+ L   G
Sbjct: 81  YGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLG 137
Query: 70  AKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFY 129
           A+R+  +GLGDDD  +E+DF  WRE  W      L   +     +T   ++I +Y +V +
Sbjct: 138 AQRIFELGLGDDDGNLEEDFITWREQFW------LAVCEHFGVEATGEESSIRQYELVVH 191
Query: 130 DNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDI 182
            + DA+   +GE    KS+ N      +DA++P  + V   ++L+   ++R   HLE DI
Sbjct: 192 TDIDAAKVYMGEMGRLKSYENQK--PPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDI 248
Query: 183 AGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTF 242
           + + + YE+GDHV VY  N S  V +   +LG   D   SL+   E+      S     F
Sbjct: 249 SDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE------SNKKHPF 302
Query: 243 P-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEYAQWIV 299
           P P S RTALT Y                      +E + LR +AS +G  K+ Y  W+V
Sbjct: 303 PCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVV 362
Query: 300 ASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKT 359
            ++R +L ++ + PS +PP+      ++PRLQ RYYSI+SS +V P+ +H+   +V  +T
Sbjct: 363 EARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYET 421
Query: 360 PTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPF 419
             GR++KG+ + W++   P+ ++   +  P+FVR+S F+LP  A  P+IM+GPGTG+APF
Sbjct: 422 KAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPF 481
Query: 420 RGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGP 479
            GF+QER  L++ G E+G +LL++GCR    DY+Y +EL  F + GAL+QL VAFSRE  
Sbjct: 482 IGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQS 541
Query: 480 TKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAES 539
            K YVQH + +    +W ++  GA++YVCGDA++MARDV  T + IV E G+++ ++A  
Sbjct: 542 HKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVD 601
Query: 540 MVKNLQMTGRYLRDVW 555
            +K L   GRY  DVW
Sbjct: 602 YIKKLMTKGRYSLDVW 617
>pdb|3QFR|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase (R457h Mutant) Length = 618 Back     alignment and structure
>pdb|3QFC|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e Mutant) Length = 618 Back     alignment and structure
>pdb|1AMO|A Chain A, Three-Dimensional Structure Of Nadph-Cytochrome P450 Reductase: Prototype For Fmn-And Fad-Containing Enzymes Length = 615 Back     alignment and structure
>pdb|3ES9|A Chain A, Nadph-Cytochrome P450 Reductase In An Open Conformation Length = 618 Back     alignment and structure
>pdb|1J9Z|A Chain A, Cypor-W677g Length = 622 Back     alignment and structure
>pdb|1JA0|A Chain A, Cypor-W677x Length = 620 Back     alignment and structure
>pdb|1JA1|A Chain A, Cypor-Triple Mutant Length = 622 Back     alignment and structure
>pdb|3OJX|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive Length = 622 Back     alignment and structure
>pdb|3FJO|A Chain A, Structure Of Chimeric Yh Cpr Length = 637 Back     alignment and structure
>pdb|3QFS|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase (FadNADPH Domain) Length = 458 Back     alignment and structure
>pdb|3QFT|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase (FadNADPH DOMAIN And R457h Mutant) Length = 458 Back     alignment and structure
>pdb|2BPO|A Chain A, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g, Y75f, K78a. Length = 682 Back     alignment and structure
>pdb|2BF4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450 Reductase Suggests A Novel Mechanism Of Electron Transfer By Diflavin Reductases. Length = 682 Back     alignment and structure
>pdb|1TLL|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase Reductase Module At 2.3 A Resolution. Length = 688 Back     alignment and structure
>pdb|2QTZ|A Chain A, Crystal Structure Of The Nadp+-Bound Fad-Containing Fnr-Like Module Of Human Methionine Synthase Reductase Length = 539 Back     alignment and structure
>pdb|4DQK|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome P450 Bm3 Length = 391 Back     alignment and structure
>pdb|4DQL|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome P450 Bm3 In Complex With Nadp+ Length = 393 Back     alignment and structure
>pdb|2QTL|A Chain A, Crystal Structure Of The Fad-Containing Fnr-Like Module Of Human Methionine Synthase Reductase Length = 539 Back     alignment and structure
>pdb|1F20|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase FadNADP+ Domain At 1.9a Resolution Length = 435 Back     alignment and structure
>pdb|1DDG|A Chain A, Crystal Structure Of Sir-Fp60 Length = 374 Back     alignment and structure
>pdb|1B1C|A Chain A, Crystal Structure Of The Fmn-Binding Domain Of Human Cytochrome P450 Reductase At 1.93a Resolution Length = 181 Back     alignment and structure
>pdb|3LVB|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From Maize Root At 1.7 Angstroms - Test Set Withheld Length = 311 Back     alignment and structure
>pdb|3LO8|A Chain A, Crystal Structure Of The Oxidized Form Of Ferredoxin:nadp+ Reductase From Maize Root At 1.05 Angstroms Length = 311 Back     alignment and structure
>pdb|1JB9|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From Maize Root At 1.7 Angstroms Length = 316 Back     alignment and structure
>pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ Reductase Ii Length = 314 Back     alignment and structure
>pdb|2B5O|A Chain A, Ferredoxin-nadp Reductase Length = 402 Back     alignment and structure
>pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ Reductase Iii Length = 310 Back     alignment and structure
>pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And Ferredoxin-Nadp+ Reductase Length = 314 Back     alignment and structure
>pdb|4AF6|A Chain A, Pea Fnr L268v Mutant Length = 308 Back     alignment and structure
>pdb|1QGA|A Chain A, Pea Fnr Y308w Mutant In Complex With Nadp+ Length = 308 Back     alignment and structure
>pdb|3MHP|A Chain A, Fnr-Recruitment To The Thylakoid Length = 296 Back     alignment and structure
>pdb|1QG0|A Chain A, Wild-type Pea Fnr Length = 308 Back     alignment and structure
>pdb|1QFY|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadp+ Length = 308 Back     alignment and structure
>pdb|1FNB|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'- Phospho-5'-Amp Bound States Length = 314 Back     alignment and structure
>pdb|1SM4|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+ Reductase From Paprika Length = 296 Back     alignment and structure
>pdb|1BX1|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase) Mutant E312q Length = 314 Back     alignment and structure
>pdb|1BX0|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase) Mutant E312l Length = 314 Back     alignment and structure
>pdb|1FRQ|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase) Mutant E312a Length = 314 Back     alignment and structure
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W) Length = 304 Back     alignment and structure
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+ Reductase From The Cyanobacterium Anabaena Pcc 7119 At 2.25 Angstroms Length = 304 Back     alignment and structure
>pdb|1FRN|A Chain A, The Involvement Of Ser96 In The Catalytic Mechanism Of Ferredoxin-Nadp+ Reductase: Structure-Function Relationship As Studied By Site-Directed Mutagenesis And X- Ray Crystallography Length = 314 Back     alignment and structure
>pdb|1BVY|F Chain F, Complex Of The Heme And Fmn-Binding Domains Of The Cytochrome P450(Bm-3) Length = 191 Back     alignment and structure
>pdb|4AF7|A Chain A, Pea Fnr C266m Mutant Length = 308 Back     alignment and structure
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase Complex Length = 303 Back     alignment and structure
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By Gln (K75q) Length = 304 Back     alignment and structure
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By Phe (Y303f) Length = 303 Back     alignment and structure
>pdb|3HR4|A Chain A, Human Inos Reductase And Calmodulin Complex Length = 219 Back     alignment and structure
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72 Replaced By Glu (k72e) Length = 304 Back     alignment and structure
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By Ser (K75s) Length = 304 Back     alignment and structure
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms Length = 303 Back     alignment and structure
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By Arg (K75r) Length = 304 Back     alignment and structure
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139 Replaced By Lys (E139k) Length = 303 Back     alignment and structure
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By Cocrystallization Length = 304 Back     alignment and structure
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Length = 304 Back     alignment and structure
>pdb|2XNC|A Chain A, Crystal Structure Of An Engineered Ferredoxin Nadp Reductase (Fnr) From Pisum Sativum Length = 315 Back     alignment and structure
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By Glu (r264e) Length = 295 Back     alignment and structure
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By Asp And Leu 78 Mutated By Asp Length = 295 Back     alignment and structure
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A) Length = 304 Back     alignment and structure
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By Pro (L263p) Length = 303 Back     alignment and structure
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By Glu (K75e) Length = 295 Back     alignment and structure
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By Asp (L78d) Length = 295 Back     alignment and structure
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed With Nadp Length = 303 Back     alignment and structure
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By Gly (T155g) Length = 295 Back     alignment and structure
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By Leu (V136l) Length = 295 Back     alignment and structure
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s) Length = 304 Back     alignment and structure
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By Gly And Ala 160 Replaced By Thr (T155g-A160t) Length = 303 Back     alignment and structure
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro (T155g-A160t-L263p) Length = 304 Back     alignment and structure
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro, Arg 264 Replaced By Pro And Gly 265 Replaced By Pro (T155g- A160t-L263p-R264p-G265p) Length = 304 Back     alignment and structure
>pdb|2RC5|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans Length = 314 Back     alignment and structure
>pdb|3JQQ|A Chain A, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum In Complex With 2'p- Amp Length = 316 Back     alignment and structure
>pdb|3JQP|A Chain A, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With 2'p-Amp Length = 316 Back     alignment and structure
>pdb|2OK7|A Chain A, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With 2'p-Amp Length = 316 Back     alignment and structure
>pdb|1YKG|A Chain A, Solution Structure Of The Flavodoxin-Like Domain From The Escherichia Coli Sulfite Reductase Length = 167 Back     alignment and structure
>pdb|2HNA|A Chain A, Solution Structure Of A Bacterial Apo-Flavodoxin Length = 147 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query555
3qe2_A618 CPR, P450R, NADPH--cytochrome P450 reductase; cypo 0.0
1tll_A688 Nitric-oxide synthase, brain; reductase module, FM 0.0
2bpo_A682 CPR, P450R, NADPH-cytochrom P450 reductase; NADPH- 0.0
3qfs_A458 CPR, P450R, NADPH--cytochrome P450 reductase; flav 0.0
2qtl_A539 MSR;, methionine synthase reductase; alpha-beta-al 0.0
1f20_A435 Nitric-oxide synthase; nitric-xoide synthase, redu 0.0
4dql_A393 Bifunctional P-450/NADPH-P450 reductase; rossmann 0.0
1ddg_A374 Sulfite reductase (NADPH) flavoprotein alpha- comp 0.0
3lo8_A311 Ferredoxin--NADP reductase; electron transport, ox 1e-105
1fnb_A314 Ferredoxin-NADP+ reductase; oxidoreductase (NADP+( 1e-105
2bmw_A304 Ferredoxin--NADP reductase; oxidoreductase, flavop 1e-104
2rc5_A314 Ferredoxin-NADP reductase; FAD, oxidoreductase; HE 1e-104
2b5o_A402 FNR, ferredoxin--NADP reductase; complex with FAD, 4e-97
2b5o_A402 FNR, ferredoxin--NADP reductase; complex with FAD, 3e-05
3jqq_A316 Ferredoxin NADP reductase; FAD, oxidoreductase; HE 4e-93
1bvy_F191 Protein (cytochrome P450 BM-3); fatty acid monooxy 7e-39
3hr4_A219 Nitric oxide synthase, inducible; inducible nitric 1e-36
1ykg_A167 SIR-FP, sulfite reductase [NADPH] flavoprotein alp 3e-34
2hna_A147 Protein MIOC, flavodoxin; alpha-beta sandwich, fla 2e-29
1f4p_A147 Flavodoxin; electron transport, flavoprotein, FMN, 1e-18
3f6r_A148 Flavodoxin; FMN binding, oxidized, electron transp 8e-13
1gvh_A396 Flavohemoprotein; oxidoreductase, NADP, heme, flav 8e-12
1cqx_A403 Flavohemoprotein; globin fold, six-stranded antipa 2e-11
2fcr_A173 Flavodoxin; electron transport; HET: FMN; 1.80A {C 3e-11
1tvc_A250 Methane monooxygenase component C, methane monooxy 1e-10
1krh_A338 Benzoate 1,2-dioxygenase reductase; alpha-beta, FA 5e-10
1qfj_A232 Protein (flavin reductase); riboflavin, ferredoxin 1e-09
2wc1_A182 Flavodoxin; electron transport, flavoprotein; HET: 6e-09
1yob_A179 Flavodoxin 2, flavodoxin II; alpha-beta fold, non- 2e-06
2r6h_A290 NADH:ubiquinone oxidoreductase, Na translocating, 3e-06
2qdx_A257 Ferredoxin reductase; oxidoreductase; HET: FAD; 1. 1e-05
2bgi_A272 Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxi 3e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
4fk8_A271 Ferredoxin--NADP reductase; ssgcid, NIH, niaid, st 8e-05
2cnd_A270 NADH-dependent nitrate reductase; nitrate assimila 4e-04
1czn_A169 Flavodoxin; FMN binding, redox potential, electron 5e-04
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A* Length = 618 Back     alignment and structure
 Score =  736 bits (1901), Expect = 0.0
 Identities = 214/548 (39%), Positives = 320/548 (58%), Gaps = 13/548 (2%)

Query: 10  YGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQG 69
           YG+G+PTDNA  FY W  E       L  +K+ VFGLGN+ YEHFN + K VD+ L   G
Sbjct: 81  YGEGDPTDNAQDFYDWLQETDV---DLSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLG 137

Query: 70  AKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFY 129
           A+R+  +GLGDDD  +E+DF  WRE  W  +      +      S      +  +  +  
Sbjct: 138 AQRIFELGLGDDDGNLEEDFITWREQFWLAVCEHFGVEATGEESSIR-QYELVVHTDIDA 196

Query: 130 DNADASVGEKSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTY 189
                    +     N    +DA++P  + V   ++L    ++R   HLE DI+ + + Y
Sbjct: 197 AKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKL-NQGTERHLMHLELDISDSKIRY 255

Query: 190 ETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRT 249
           E+GDHV VY  N S  V +   +LG   D   SL+   E+          P   P S RT
Sbjct: 256 ESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEESNKK-----HPFPCPTSYRT 310

Query: 250 ALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPA--GKDEYAQWIVASQRSLLE 307
           ALT Y D+ + P+ + L  LA +AS+P+E + LR +AS +  GK+ Y  W+V ++R +L 
Sbjct: 311 ALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILA 370

Query: 308 VMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKG 367
           ++ + PS +PP+      ++PRLQ RYYSI+SS +V P+ +H+   +V  +T  GR++KG
Sbjct: 371 ILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKG 429

Query: 368 LCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERF 427
           + + W++   P+ ++   +  P+FVR+S F+LP  A  P+IM+GPGTG+APF GF+QER 
Sbjct: 430 VATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERA 489

Query: 428 ALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHK 487
            L++ G E+G +LL++GCR    DY+Y +EL  F + GAL+QL VAFSRE   K YVQH 
Sbjct: 490 WLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSHKVYVQHL 549

Query: 488 MMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMT 547
           + +    +W ++  GA++YVCGDA++MARDV  T + IV E G+++ ++A   +K L   
Sbjct: 550 LKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTK 609

Query: 548 GRYLRDVW 555
           GRY  DVW
Sbjct: 610 GRYSLDVW 617
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4 Length = 688 Back     alignment and structure
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A* Length = 682 Back     alignment and structure
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A* Length = 458 Back     alignment and structure
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A* Length = 539 Back     alignment and structure
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4 Length = 435 Back     alignment and structure
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A* Length = 393 Back     alignment and structure
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A* Length = 374 Back     alignment and structure
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A* Length = 311 Back     alignment and structure
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A* Length = 314 Back     alignment and structure
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ... Length = 304 Back     alignment and structure
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A* Length = 314 Back     alignment and structure
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP} Length = 402 Back     alignment and structure
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP} Length = 402 Back     alignment and structure
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A* Length = 316 Back     alignment and structure
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1 Length = 191 Back     alignment and structure
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, alternative splicing, calcium, calmodulin-binding, FAD, FMN, heme, iron, metal-binding; HET: FMN; 2.50A {Homo sapiens} Length = 219 Back     alignment and structure
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2 Length = 167 Back     alignment and structure
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A Length = 147 Back     alignment and structure
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ... Length = 147 Back     alignment and structure
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A* Length = 148 Back     alignment and structure
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 Length = 396 Back     alignment and structure
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A* Length = 403 Back     alignment and structure
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1 Length = 173 Back     alignment and structure
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2 Length = 250 Back     alignment and structure
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Length = 338 Back     alignment and structure
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 Length = 232 Back     alignment and structure
>2wc1_A Flavodoxin; electron transport, flavoprotein; HET: FMN; 2.17A {Rhodobacter capsulatus} Length = 182 Back     alignment and structure
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1 Length = 179 Back     alignment and structure
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis} Length = 290 Back     alignment and structure
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A* Length = 257 Back     alignment and structure
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A* Length = 272 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A* Length = 271 Back     alignment and structure
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A* Length = 270 Back     alignment and structure
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A* Length = 169 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query555
3qe2_A618 CPR, P450R, NADPH--cytochrome P450 reductase; cypo 100.0
2bpo_A682 CPR, P450R, NADPH-cytochrom P450 reductase; NADPH- 100.0
1tll_A688 Nitric-oxide synthase, brain; reductase module, FM 100.0
3qfs_A458 CPR, P450R, NADPH--cytochrome P450 reductase; flav 100.0
2qtl_A539 MSR;, methionine synthase reductase; alpha-beta-al 100.0
4dql_A393 Bifunctional P-450/NADPH-P450 reductase; rossmann 100.0
1f20_A435 Nitric-oxide synthase; nitric-xoide synthase, redu 100.0
1ddg_A374 Sulfite reductase (NADPH) flavoprotein alpha- comp 100.0
1fnb_A314 Ferredoxin-NADP+ reductase; oxidoreductase (NADP+( 100.0
2bmw_A304 Ferredoxin--NADP reductase; oxidoreductase, flavop 100.0
2b5o_A402 FNR, ferredoxin--NADP reductase; complex with FAD, 100.0
3vo2_A310 Putative uncharacterized protein; rossmann fold, o 100.0
2rc5_A314 Ferredoxin-NADP reductase; FAD, oxidoreductase; HE 100.0
3lo8_A311 Ferredoxin--NADP reductase; electron transport, ox 100.0
3jqq_A316 Ferredoxin NADP reductase; FAD, oxidoreductase; HE 100.0
1tvc_A250 Methane monooxygenase component C, methane monooxy 99.91
3hr4_A219 Nitric oxide synthase, inducible; inducible nitric 99.9
1qfj_A232 Protein (flavin reductase); riboflavin, ferredoxin 99.9
2r6h_A290 NADH:ubiquinone oxidoreductase, Na translocating, 99.9
1fdr_A248 Flavodoxin reductase; ferredoxin reductase, flavin 99.89
1krh_A338 Benzoate 1,2-dioxygenase reductase; alpha-beta, FA 99.89
4eh1_A243 Flavohemoprotein; structural genomics, niaid, nati 99.89
2eix_A243 NADH-cytochrome B5 reductase; flavoprotein, FAD-bi 99.89
1gvh_A396 Flavohemoprotein; oxidoreductase, NADP, heme, flav 99.88
4fk8_A271 Ferredoxin--NADP reductase; ssgcid, NIH, niaid, st 99.88
1umk_A275 B5R, NADH-cytochrome B5 reductase; flavoprotein, b 99.88
1ep3_B262 Dihydroorotate dehydrogenase B (PYRK subunit); het 99.87
4g1v_A399 Flavohemoglobin; three domains: globin fold, antip 99.87
2bgi_A272 Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxi 99.87
2qdx_A257 Ferredoxin reductase; oxidoreductase; HET: FAD; 1. 99.87
1cqx_A403 Flavohemoprotein; globin fold, six-stranded antipa 99.86
2cnd_A270 NADH-dependent nitrate reductase; nitrate assimila 99.86
2pia_A321 Phthalate dioxygenase reductase; HET: FMN; 2.00A { 99.84
1bvy_F191 Protein (cytochrome P450 BM-3); fatty acid monooxy 99.75
2gpj_A252 Siderophore-interacting protein; structural genomi 99.65
1ykg_A167 SIR-FP, sulfite reductase [NADPH] flavoprotein alp 99.64
2hna_A147 Protein MIOC, flavodoxin; alpha-beta sandwich, fla 99.62
3a1f_A186 Cytochrome B-245 heavy chain; GP91(PHOX), NADPH bi 99.62
3lyu_A142 Putative hydrogenase; the C-terminal has AN alpha- 99.59
3lrx_A158 Putative hydrogenase; alpha-beta protein, structur 99.59
3f6r_A148 Flavodoxin; FMN binding, oxidized, electron transp 99.44
1f4p_A147 Flavodoxin; electron transport, flavoprotein, FMN, 99.31
2wc1_A182 Flavodoxin; electron transport, flavoprotein; HET: 99.29
1yob_A179 Flavodoxin 2, flavodoxin II; alpha-beta fold, non- 99.28
2fcr_A173 Flavodoxin; electron transport; HET: FMN; 1.80A {C 99.24
1ag9_A175 Flavodoxin; electron transport, reductive activati 99.2
2bmv_A164 Flavodoxin; electron transport, flavoprotein, FMN, 99.12
1obo_A169 Flavodoxin; electron transfer, flavoprotein, elect 99.1
2xod_A119 NRDI protein, NRDI; flavoprotein, redox protein, r 99.09
1czn_A169 Flavodoxin; FMN binding, redox potential, electron 99.08
1rlj_A139 NRDI protein; flavoprotein, FMN, thioredoxin, alph 98.96
5nul_A138 Flavodoxin; electron transport, flavoprotein, FMN; 98.74
3n3a_C153 Protein NRDI; ribonucleotide reductase, four-helix 98.49
2fz5_A137 Flavodoxin; alpha/beta doubly-wound topology, non- 98.25
3fni_A159 Putative diflavin flavoprotein A 3; alpha-beta pro 98.12
3hly_A161 Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein 98.11
1ycg_A398 Nitric oxide reductase; DIIRON site, oxidoreductas 97.48
1e5d_A402 Rubredoxin\:oxygen oxidoreductase; oxygenreductase 97.44
2ohh_A404 Type A flavoprotein FPRA; beta-lactamase like doma 96.83
2a5l_A200 Trp repressor binding protein WRBA; APC5760, PA094 96.66
2q9u_A414 A-type flavoprotein; flavodoxin like, beta lactama 96.55
3d7n_A193 Flavodoxin, WRBA-like protein; structural genomics 96.12
2ark_A188 Flavodoxin; FMN, structural genomics, PSI, structu 95.98
3klb_A162 Putative flavoprotein; structural genomi center fo 95.98
4ici_A171 Putative flavoprotein; PF12682 family protein, fla 95.82
2vzf_A197 NADH-dependent FMN reductase; oxidoreductase; 2.50 95.73
3b6i_A198 Flavoprotein WRBA; flavoproteins, NADH:quinone oxi 95.61
2zki_A199 199AA long hypothetical Trp repressor binding prot 95.54
1t5b_A201 Acyl carrier protein phosphodiesterase; structural 95.36
1ydg_A211 Trp repressor binding protein WRBA; tetramer, stru 95.13
4dik_A410 Flavoprotein; TM0755, electron transport, DI-iron 94.81
3gfs_A174 FMN-dependent NADPH-azoreductase; flavoproteins, q 94.8
1rtt_A193 Conserved hypothetical protein; protein structure 93.73
1t0i_A191 YLR011WP; FMN binding protein, flavodoxin, azoredu 93.63
1sqs_A242 Conserved hypothetical protein; structural genomic 92.16
3k1y_A191 Oxidoreductase; structural genomics, PSI-2, protei 91.93
3edo_A151 Flavoprotein, putative Trp repressor binding prote 91.75
4hs4_A199 Chromate reductase; triple-layered, A/B/A structur 90.66
3lcm_A196 SMU.1420, putative oxidoreductase; NADPH:quinone o 90.46
2hpv_A208 FMN-dependent NADH-azoreductase; structural genomi 89.32
3fvw_A192 Putative NAD(P)H-dependent FMN reductase; Q8DWD8_s 89.28
3svl_A193 Protein YIEF; E. coli CHRR enzyme, chromate biorem 89.03
3ha2_A177 NADPH-quinone reductase; structural genomics, PSI- 88.53
2q62_A247 ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobi 88.47
3u7r_A190 NADPH-dependent FMN reductase; alpha/beta twisted 87.85
1rli_A184 Trp repressor binding protein; structural genomics 87.57
3rpe_A218 MDAB, modulator of drug activity B; structural gen 86.36
2fzv_A279 Putative arsenical resistance protein; flavin bind 85.97
3r6w_A212 FMN-dependent NADH-azoreductase 1; nitrofurazone, 85.95
3p0r_A211 Azoreductase; structural genomics, center for stru 85.58
3vo2_A310 Putative uncharacterized protein; rossmann fold, o 84.8
2amj_A204 Modulator of drug activity B; oxidoreductase, mena 84.74
3s2y_A199 Chromate reductase; uranium reductase, oxidoreduct 84.79
3tem_A228 Ribosyldihydronicotinamide dehydrogenase [quinone; 80.96
3f2v_A192 General stress protein 14; alpha-beta protein., st 80.82
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A* Back     alignment and structure
Probab=100.00  E-value=3.6e-104  Score=878.04  Aligned_cols=537  Identities=41%  Similarity=0.770  Sum_probs=466.8

Q ss_pred             eEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008747            2 KIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD   81 (555)
Q Consensus         2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d~   81 (555)
                      .+||++||||+|++|+||+.||++|.+..   ..|++++||||||||++|++||+++|+++++|+++||++++++|++|+
T Consensus        73 ~vi~~~sT~G~G~~pd~~~~F~~~L~~~~---~~l~~~~~avfGlGd~~Y~~f~~~~k~~d~~L~~lGa~~~~~~g~~D~  149 (618)
T 3qe2_A           73 LVVFCMATYGEGDPTDNAQDFYDWLQETD---VDLSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGAQRIFELGLGDD  149 (618)
T ss_dssp             EEEEEEECBGGGBCCGGGHHHHHHHHHCC---CCCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEESSCCEEEET
T ss_pred             EEEEEcCccCCCCCCHHHHHHHHHHhhcc---ccccCCEEEEEeCCCCCcHhHhHHHHHHHHHHHhCCCCEeeccccccc
Confidence            58999999999999999999999999743   359999999999999999999999999999999999999999999999


Q ss_pred             CCCchhhHHHHHHHHHHHHHhhhCCCCCCCCcCCCccccccceEEEEecCCCc---ccccc--ccCCCCCCcccCCCCCe
Q 008747           82 DQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYDNADA---SVGEK--SWGNANGHAVYDAQHPC  156 (555)
Q Consensus        82 ~~~~~~~~~~W~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~  156 (555)
                      +.+.+++|++|++.+|++|.+.++.+...   ..   ...+.+++........   ...+.  .........+++..+|+
T Consensus       150 ~~~~~~~~~~W~~~l~~~l~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (618)
T 3qe2_A          150 DGNLEEDFITWREQFWLAVCEHFGVEATG---EE---SSIRQYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPF  223 (618)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHTCCCC---------CCCCSEEEEECTTCCGGGSBCSCCSSTTTTTSCCSCCSSSSCE
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHhCCCccc---cc---ccccceeEEecccccccccccccccccccccccCCCcccCCcE
Confidence            99999999999999999999988643211   00   1223455554321110   00000  00111223346677899


Q ss_pred             eeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCCCCCCCCC
Q 008747          157 RSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKS  236 (555)
Q Consensus       157 ~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N~~~~V~~~l~~l~l~~~~~~~i~~~~~~~~~~~~~  236 (555)
                      .++|+.|++|+. +++++|+||+|++++++++|+|||+|+|||.|+++.|+++|++||+++|+.|++......      .
T Consensus       224 ~a~v~~n~~Lt~-~~~~~~~hie~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~l~~d~~v~~~~~~~~------~  296 (618)
T 3qe2_A          224 LAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE------S  296 (618)
T ss_dssp             EEEEEEEEECSC-CSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCTTCEEEEEESCTT------C
T ss_pred             EEEEEeEEEcCC-CCCCcEEEEEEEcCCCCcccccCCEEEEEcCCCHHHHHHHHHHhCcCCCceEEEecCCcc------c
Confidence            999999999995 578999999999998899999999999999999999999999999999999999754321      1


Q ss_pred             CCCCCCC-cchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhc--CccCHHHHHHHHHhcCCCHHHHHhhCC
Q 008747          237 TLPPTFP-PCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLA--SPAGKDEYAQWIVASQRSLLEVMSEFP  313 (555)
Q Consensus       237 ~~~~~~p-~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~--~~~~~~~~~~~~~~~~~~~~dvl~~f~  313 (555)
                      ..+.|+| |+|++++|++|+||+++|++.||+.||.||+|+.+|++|++|+  +++|+++|.+|+.+.+++++|||.+||
T Consensus       297 ~~~~~~p~~~tl~~~l~~~~di~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~i~dvL~~fp  376 (618)
T 3qe2_A          297 NKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCP  376 (618)
T ss_dssp             SCCSSSSSSEEHHHHHHHTBCCSSCCCHHHHHHHGGGBCSHHHHHHHHHTTCSSSHHHHHHHHHTTTTTCCHHHHHHHST
T ss_pred             cCCCCCCCceEHHHhhhhEeecCCCCcHHHHHHHHHHcCCHHHHHHHHHhhccChhhHHHHHHHHhhcCCCHHHHHHhCC
Confidence            2345788 9999999999999999999999999999999999999999999  778999999999999999999999999


Q ss_pred             CCCCChHHHHHHhcCCCcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhccCCCCcCCCCceeeEEEe
Q 008747          314 SAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVR  393 (555)
Q Consensus       314 s~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~v~v~~~  393 (555)
                      ++++|+++|++.+ |+++||+|||||+|..++++++|+|+++.+.++.++.+.|+||+||+++.+.|+......++|+++
T Consensus       377 s~~~p~~~l~~~l-p~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~~~Gd~~~~~~v~v~~p  455 (618)
T 3qe2_A          377 SLRPPIDHLCELL-PRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVR  455 (618)
T ss_dssp             TBCCCHHHHHHHS-CBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCCC-----CCEEEEEEE
T ss_pred             ccCCCHHHHHHhc-cccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhcccCCCCcceEEEEEEe
Confidence            9999999999765 999999999999998778999999999988888899999999999999987322101125889999


Q ss_pred             cCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceEEEE
Q 008747          394 QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVA  473 (555)
Q Consensus       394 ~~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a  473 (555)
                      .|.|++|.++.+|+||||+|||||||+||++++......+...++++||||||+++.|++|++||+++.+.+.+++++++
T Consensus       456 ~g~F~lp~~~~~piimIg~GtGIAPfrs~l~~r~~~~~~g~~~~~~~L~~G~R~~~~D~ly~~el~~~~~~g~l~~l~~a  535 (618)
T 3qe2_A          456 KSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVA  535 (618)
T ss_dssp             CCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHHTSSSEEEEE
T ss_pred             cCcccCCCCCCCCeEEEcCCcchhhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCccccchHHHHHHHHhcCCCcEEEEE
Confidence            99999998888999999999999999999999987654444457899999999985699999999999999988899999


Q ss_pred             EccCCCCcccccchhhccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCEEEe
Q 008747          474 FSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRD  553 (555)
Q Consensus       474 ~Sr~~~~k~yVq~~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~d  553 (555)
                      |||++..++||||+|.++.+.+++++.++++||||||+..|+++|.++|.+|++++++++.++|++|+++|+++|||++|
T Consensus       536 ~Srd~~~k~yVqd~l~~~~~~l~~~l~~~a~vYvCGp~~~M~~~V~~~L~~i~~~~g~~~~~~a~~~~~~l~~~~RY~~D  615 (618)
T 3qe2_A          536 FSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLD  615 (618)
T ss_dssp             ETTSSSSCCCHHHHHHHTHHHHHHHHHHTCEEEEEEETTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred             EcCCCCCCCcHHHHHHHhHHHHHHHHhCCcEEEEECCchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCeEEe
Confidence            99998889999999999999999988889999999995599999999999999999999999999999999999999999


Q ss_pred             eC
Q 008747          554 VW  555 (555)
Q Consensus       554 vw  555 (555)
                      ||
T Consensus       616 v~  617 (618)
T 3qe2_A          616 VW  617 (618)
T ss_dssp             EE
T ss_pred             ec
Confidence            99
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A* Back     alignment and structure
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4 Back     alignment and structure
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A* Back     alignment and structure
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A* Back     alignment and structure
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A* Back     alignment and structure
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4 Back     alignment and structure
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A* Back     alignment and structure
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A* Back     alignment and structure
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ... Back     alignment and structure
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP} Back     alignment and structure
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A* Back     alignment and structure
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A* Back     alignment and structure
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A* Back     alignment and structure
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A* Back     alignment and structure
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2 Back     alignment and structure
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens} Back     alignment and structure
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 Back     alignment and structure
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis} Back     alignment and structure
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A* Back     alignment and structure
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Back     alignment and structure
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum} Back     alignment and structure
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 Back     alignment and structure
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A* Back     alignment and structure
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A* Back     alignment and structure
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B* Back     alignment and structure
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A* Back     alignment and structure
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A* Back     alignment and structure
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A* Back     alignment and structure
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A* Back     alignment and structure
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A* Back     alignment and structure
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Back     alignment and structure
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1 Back     alignment and structure
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens} Back     alignment and structure
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2 Back     alignment and structure
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A Back     alignment and structure
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens} Back     alignment and structure
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus} Back     alignment and structure
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus} Back     alignment and structure
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A* Back     alignment and structure
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ... Back     alignment and structure
>2wc1_A Flavodoxin; electron transport, flavoprotein; HET: FMN; 2.17A {Rhodobacter capsulatus} Back     alignment and structure
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1 Back     alignment and structure
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1 Back     alignment and structure
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A* Back     alignment and structure
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A* Back     alignment and structure
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A* Back     alignment and structure
>2xod_A NRDI protein, NRDI; flavoprotein, redox protein, ribonucleotide reductase; HET: FMN; 0.96A {Bacillus anthracis} PDB: 2xoe_A* 2x2o_A* 2x2p_A* Back     alignment and structure
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A* Back     alignment and structure
>1rlj_A NRDI protein; flavoprotein, FMN, thioredoxin, alpha/beta/alpha sandwich, structural genomics, PSI, protein structure initiative; HET: FMN; 2.00A {Bacillus subtilis} SCOP: c.23.5.7 Back     alignment and structure
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A* Back     alignment and structure
>3n3a_C Protein NRDI; ribonucleotide reductase, four-helix bundle, dimanganese CLU flavoprotein, oxidoreductase; HET: FMN; 1.99A {Escherichia coli} PDB: 3n39_C* 3n3b_C* Back     alignment and structure
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1 Back     alignment and structure
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A Back     alignment and structure
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301} Back     alignment and structure
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A* Back     alignment and structure
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 Back     alignment and structure
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A* Back     alignment and structure
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A* Back     alignment and structure
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} Back     alignment and structure
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens} Back     alignment and structure
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8 Back     alignment and structure
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343} Back     alignment and structure
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii} Back     alignment and structure
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A* Back     alignment and structure
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A* Back     alignment and structure
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii} Back     alignment and structure
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A* Back     alignment and structure
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A* Back     alignment and structure
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A* Back     alignment and structure
>3gfs_A FMN-dependent NADPH-azoreductase; flavoproteins, quinone reductase, flavodoxin, oligomerization, flavoprotein, oxidoreductase; HET: FMN; 2.10A {Bacillus subtilis} SCOP: c.23.5.4 PDB: 1nni_1* 2gsw_A* 3gfr_A* 3gfq_A* Back     alignment and structure
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A* Back     alignment and structure
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4 Back     alignment and structure
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A* Back     alignment and structure
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A Back     alignment and structure
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A* Back     alignment and structure
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A* Back     alignment and structure
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis} Back     alignment and structure
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans} Back     alignment and structure
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli} Back     alignment and structure
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745} Back     alignment and structure
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti} Back     alignment and structure
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans} Back     alignment and structure
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6 Back     alignment and structure
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis} Back     alignment and structure
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4 Back     alignment and structure
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A* Back     alignment and structure
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis} Back     alignment and structure
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A* Back     alignment and structure
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A* Back     alignment and structure
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii} Back     alignment and structure
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ... Back     alignment and structure
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 555
d1ja1a1279 b.43.4.1 (A:240-518) NADPH-cytochrome p450 reducta 3e-88
d1f20a1270 b.43.4.1 (A:963-1232) Neuronal nitric-oxide syntha 2e-68
d1ja1a3160 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reducta 5e-59
d1ddga1221 b.43.4.1 (A:226-446) Sulfite reductase flavoprotei 1e-51
d1f20a2165 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synth 2e-47
d1ddga2153 c.25.1.4 (A:447-599) Sulfite reductase flavoprotei 7e-45
d1fnda2160 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodo 3e-35
d1jb9a2154 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodo 3e-34
d2bmwa2162 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodo 2e-28
d1ja1a2177 c.23.5.2 (A:63-239) NADPH-cytochrome p450 reductas 6e-27
d1ykga1146 c.23.5.2 (A:63-208) Sulfite reductase alpha-compon 4e-21
d1tlla2202 c.23.5.2 (A:750-951) Nitric oxide (NO) synthase FM 3e-20
d1bvyf_152 c.23.5.1 (F:) FMN-binding domain of the cytochrome 3e-19
d1f4pa_147 c.23.5.1 (A:) Flavodoxin {Desulfovibrio vulgaris [ 7e-13
d1a8pa2158 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodo 4e-12
d1tvca2141 c.25.1.2 (A:111-251) Methane monooxygenase compone 5e-12
d2cnda2146 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea 6e-12
d2fcra_173 c.23.5.1 (A:) Flavodoxin {Chondrus crispus [TaxId: 3e-11
d1yoba1179 c.23.5.1 (A:1-179) Flavodoxin {Azotobacter vinelan 5e-11
d1gvha3143 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal d 5e-11
d1cqxa3142 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal d 8e-11
d1rlja_135 c.23.5.7 (A:) Flavoprotein NrdI {Bacillus subtilis 6e-10
d1qfja2135 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase 9e-10
d1krha2133 c.25.1.2 (A:206-338) Benzoate dioxygenase reductas 2e-09
d1umka2147 c.25.1.1 (A:154-300) cytochrome b5 reductase {Huma 4e-08
d2piaa2120 c.25.1.2 (A:104-223) Phthalate dioxygenase reducta 1e-07
d1jb9a1157 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxi 1e-07
d1czna_169 c.23.5.1 (A:) Flavodoxin {Synechococcus elongatus 2e-06
d1fdra2148 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodo 2e-06
d1ag9a_175 c.23.5.1 (A:) Flavodoxin {Escherichia coli [TaxId: 1e-05
d2bmwa1133 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxi 8e-05
d2bmwa1133 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxi 4e-04
d1fnda1136 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodox 9e-05
d1oboa_169 c.23.5.1 (A:) Flavodoxin {Anabaena, pcc 7119 and 7 3e-04
d2fz5a1137 c.23.5.1 (A:1-137) Flavodoxin {Megasphaera elsdeni 4e-04
d1fuea_163 c.23.5.1 (A:) Flavodoxin {Helicobacter pylori [Tax 5e-04
d1ep3b2160 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase 0.002
>d1ja1a1 b.43.4.1 (A:240-518) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 279 Back     information, alignment and structure

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: NADPH-cytochrome p450 reductase FAD-binding domain-like
domain: NADPH-cytochrome p450 reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  271 bits (694), Expect = 3e-88
 Identities = 93/286 (32%), Positives = 162/286 (56%), Gaps = 14/286 (4%)

Query: 119 AAISEYRVVFYDNADAS---VGE--KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDR 173
           ++I +Y +V +++ D +    GE  +     N    +DA++P  + V   ++L+  + +R
Sbjct: 1   SSIRQYELVVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQGT-ER 59

Query: 174 SCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPL 233
              HLE DI+ + + YE+GDHV VY  N S  V +   +LG   D   SL+   E+    
Sbjct: 60  HLMHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEESNKK 119

Query: 234 GKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAG--K 291
                 P   P + RTALT Y D+ + P+ + L  LA +AS+P+E + L  +AS +G  K
Sbjct: 120 -----HPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGK 174

Query: 292 DEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVT 351
           + Y  W+V ++R +L ++ ++PS +PP+      ++PRLQ RYY+I+SS +V P+ +H+ 
Sbjct: 175 ELYLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYAIASSSKVHPNSVHIC 233

Query: 352 CALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNF 397
              V  +  +GRV+KG+ ++W++   P  ++   +  P+FVR+S F
Sbjct: 234 AVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQF 279
>d1f20a1 b.43.4.1 (A:963-1232) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 270 Back     information, alignment and structure
>d1ja1a3 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 160 Back     information, alignment and structure
>d1ddga1 b.43.4.1 (A:226-446) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Length = 221 Back     information, alignment and structure
>d1f20a2 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 165 Back     information, alignment and structure
>d1ddga2 c.25.1.4 (A:447-599) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Length = 153 Back     information, alignment and structure
>d1fnda2 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodoxin reductase) {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 160 Back     information, alignment and structure
>d1jb9a2 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodoxin reductase) {Maize (Zea mays), root isoform [TaxId: 4577]} Length = 154 Back     information, alignment and structure
>d2bmwa2 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodoxin reductase) {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Length = 162 Back     information, alignment and structure
>d1ja1a2 c.23.5.2 (A:63-239) NADPH-cytochrome p450 reductase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 177 Back     information, alignment and structure
>d1ykga1 c.23.5.2 (A:63-208) Sulfite reductase alpha-component CysJ N-terminal domain {Escherichia coli [TaxId: 562]} Length = 146 Back     information, alignment and structure
>d1tlla2 c.23.5.2 (A:750-951) Nitric oxide (NO) synthase FMN domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 202 Back     information, alignment and structure
>d1bvyf_ c.23.5.1 (F:) FMN-binding domain of the cytochrome P450bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 152 Back     information, alignment and structure
>d1f4pa_ c.23.5.1 (A:) Flavodoxin {Desulfovibrio vulgaris [TaxId: 881]} Length = 147 Back     information, alignment and structure
>d1a8pa2 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodoxin reductase) {Azotobacter vinelandii [TaxId: 354]} Length = 158 Back     information, alignment and structure
>d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Length = 141 Back     information, alignment and structure
>d2cnda2 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} Length = 146 Back     information, alignment and structure
>d2fcra_ c.23.5.1 (A:) Flavodoxin {Chondrus crispus [TaxId: 2769]} Length = 173 Back     information, alignment and structure
>d1yoba1 c.23.5.1 (A:1-179) Flavodoxin {Azotobacter vinelandii [TaxId: 354]} Length = 179 Back     information, alignment and structure
>d1gvha3 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 143 Back     information, alignment and structure
>d1cqxa3 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal domain {Alcaligenes eutrophus [TaxId: 106590]} Length = 142 Back     information, alignment and structure
>d1rlja_ c.23.5.7 (A:) Flavoprotein NrdI {Bacillus subtilis [TaxId: 1423]} Length = 135 Back     information, alignment and structure
>d1qfja2 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Length = 135 Back     information, alignment and structure
>d1krha2 c.25.1.2 (A:206-338) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Length = 133 Back     information, alignment and structure
>d1umka2 c.25.1.1 (A:154-300) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 147 Back     information, alignment and structure
>d2piaa2 c.25.1.2 (A:104-223) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Length = 120 Back     information, alignment and structure
>d1jb9a1 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Maize (Zea mays), root isoform [TaxId: 4577]} Length = 157 Back     information, alignment and structure
>d1czna_ c.23.5.1 (A:) Flavodoxin {Synechococcus elongatus PCC 7942 [TaxId: 1140]} Length = 169 Back     information, alignment and structure
>d1fdra2 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodoxin reductase) {Escherichia coli [TaxId: 562]} Length = 148 Back     information, alignment and structure
>d1ag9a_ c.23.5.1 (A:) Flavodoxin {Escherichia coli [TaxId: 562]} Length = 175 Back     information, alignment and structure
>d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Length = 133 Back     information, alignment and structure
>d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Length = 133 Back     information, alignment and structure
>d1fnda1 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 136 Back     information, alignment and structure
>d1oboa_ c.23.5.1 (A:) Flavodoxin {Anabaena, pcc 7119 and 7120 [TaxId: 1163]} Length = 169 Back     information, alignment and structure
>d2fz5a1 c.23.5.1 (A:1-137) Flavodoxin {Megasphaera elsdenii [TaxId: 907]} Length = 137 Back     information, alignment and structure
>d1fuea_ c.23.5.1 (A:) Flavodoxin {Helicobacter pylori [TaxId: 210]} Length = 163 Back     information, alignment and structure
>d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Length = 160 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query555
d1ja1a1279 NADPH-cytochrome p450 reductase {Rat (Rattus norve 100.0
d1f20a1270 Neuronal nitric-oxide synthase FAD/NADP+ domain {R 100.0
d1ja1a3160 NADPH-cytochrome p450 reductase {Rat (Rattus norve 100.0
d1ddga1221 Sulfite reductase flavoprotein {Escherichia coli [ 100.0
d1f20a2165 Neuronal nitric-oxide synthase FAD/NADP+ domain {R 100.0
d1ddga2153 Sulfite reductase flavoprotein {Escherichia coli [ 99.98
d1fnda2160 Ferredoxin reductase (flavodoxin reductase) {Spina 99.96
d1jb9a2154 Ferredoxin reductase (flavodoxin reductase) {Maize 99.96
d2bmwa2162 Ferredoxin reductase (flavodoxin reductase) {Cyano 99.94
d1ja1a2177 NADPH-cytochrome p450 reductase, N-terminal domain 99.93
d1ykga1146 Sulfite reductase alpha-component CysJ N-terminal 99.92
d1tlla2202 Nitric oxide (NO) synthase FMN domain {Rat (Rattus 99.91
d1bvyf_152 FMN-binding domain of the cytochrome P450bm-3 {Bac 99.91
d1tvca2141 Methane monooxygenase component C, MmoC {Methyloco 99.85
d1krha2133 Benzoate dioxygenase reductase {Acinetobacter sp. 99.83
d1f4pa_147 Flavodoxin {Desulfovibrio vulgaris [TaxId: 881]} 99.79
d1qfja2135 NAD(P)H:flavin oxidoreductase {Escherichia coli [T 99.78
d1fdra2148 Ferredoxin reductase (flavodoxin reductase) {Esche 99.77
d1gvha3143 Flavohemoglobin, C-terminal domain {Escherichia co 99.75
d1cqxa3142 Flavohemoglobin, C-terminal domain {Alcaligenes eu 99.75
d2fcra_173 Flavodoxin {Chondrus crispus [TaxId: 2769]} 99.74
d2piaa2120 Phthalate dioxygenase reductase {Pseudomonas cepac 99.73
d1yoba1179 Flavodoxin {Azotobacter vinelandii [TaxId: 354]} 99.72
d1umka2147 cytochrome b5 reductase {Human (Homo sapiens) [Tax 99.71
d1jb9a1157 Ferredoxin reductase (flavodoxin reductase) N-term 99.7
d2cnda2146 Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} 99.69
d1czna_169 Flavodoxin {Synechococcus elongatus PCC 7942 [TaxI 99.68
d1rlja_135 Flavoprotein NrdI {Bacillus subtilis [TaxId: 1423] 99.67
d1ag9a_175 Flavodoxin {Escherichia coli [TaxId: 562]} 99.66
d1a8pa2158 Ferredoxin reductase (flavodoxin reductase) {Azoto 99.66
d1fnda1136 Ferredoxin reductase (flavodoxin reductase) N-term 99.52
d1ep3b2160 Dihydroorotate dehydrogenase B, PyrK subunit {Lact 99.47
d1oboa_169 Flavodoxin {Anabaena, pcc 7119 and 7120 [TaxId: 11 99.45
d2bmwa1133 Ferredoxin reductase (flavodoxin reductase) N-term 99.44
d1fuea_163 Flavodoxin {Helicobacter pylori [TaxId: 210]} 99.37
d2fz5a1137 Flavodoxin {Megasphaera elsdenii [TaxId: 907]} 98.84
d5nula_138 Flavodoxin {Clostridium beijerinckii [TaxId: 1520] 98.53
d1vmea1148 ROO-like flavoprotein TM0755, C-terminal domain {T 98.39
d1e5da1152 Rubredoxin oxygen:oxidoreductase (ROO), C-terminal 98.17
d1ycga1149 Nitric oxide reductase C-terminal domain {Moorella 97.82
d1fdra199 Ferredoxin reductase (flavodoxin reductase) N-term 97.63
d1qfja197 NAD(P)H:flavin oxidoreductase {Escherichia coli [T 97.44
d1a8pa199 Ferredoxin reductase (flavodoxin reductase) N-term 97.25
d1cqxa2111 Flavohemoglobin, central domain {Alcaligenes eutro 97.16
d1krha1100 Benzoate dioxygenase reductase {Acinetobacter sp. 97.0
d2piaa1103 Phthalate dioxygenase reductase {Pseudomonas cepac 96.81
d2cnda1114 Nitrate reductase core domain {Corn (Zea mays) [Ta 96.76
d1tvca1109 Methane monooxygenase component C, MmoC {Methyloco 96.64
d1gvha2107 Flavohemoglobin, central domain {Escherichia coli 96.13
d1ep3b1101 Dihydroorotate dehydrogenase B, PyrK subunit {Lact 96.13
d1umka1124 cytochrome b5 reductase {Human (Homo sapiens) [Tax 95.74
d2arka1184 Flavodoxin FldA {Aquifex aeolicus [TaxId: 63363]} 95.62
d1nni1_171 Azobenzene reductase {Bacillus subtilis [TaxId: 14 89.07
d1sqsa_232 Hypothetical protein SP1951 {(Streptococcus pneumo 89.0
d1rtta_174 Hypothetical protein PA1204 {Pseudomonas aeruginos 87.56
d1t0ia_185 Hypothetical protein Ylr011wp {Baker's yeast (Sacc 86.11
d2z98a1200 ACP phosphodiesterase AcpD {Escherichia coli [TaxI 84.04
>d1ja1a1 b.43.4.1 (A:240-518) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: NADPH-cytochrome p450 reductase FAD-binding domain-like
domain: NADPH-cytochrome p450 reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.5e-49  Score=393.09  Aligned_cols=245  Identities=36%  Similarity=0.693  Sum_probs=223.9

Q ss_pred             CCCcccCCCCCeeeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEe
Q 008747          145 NGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLH  224 (555)
Q Consensus       145 ~~~~~~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N~~~~V~~~l~~l~l~~~~~~~i~  224 (555)
                      ..+.+|+.++|+.|+|+.|++|+. +++|+|+||+||+++++++|+|||+|+|||.|+++.|+++|++||+++++.+.+.
T Consensus        32 ~~~~~y~~~nP~~A~v~~n~~L~~-~s~k~~~Hie~dl~~s~l~Y~~GD~l~V~P~N~~~~V~~~l~~lgl~~d~~v~~~  110 (279)
T d1ja1a1          32 NQKPPFDAKNPFLAAVTANRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLN  110 (279)
T ss_dssp             SCCSSCBTTBCEEEEEEEEEECCS-SSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCTTCEEEEE
T ss_pred             cCCCCCCCCCCEEeEEEEEEEeCC-CCCccEEEEEEEcCCCCceecCCCEEEEEeCCCHHHHHHHHHHcCCCCceEEEec
Confidence            345678899999999999999994 6789999999999988999999999999999999999999999999999999998


Q ss_pred             eCCCCCCCCCCCCCCCCCC-cchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCc--cCHHHHHHHHHhc
Q 008747          225 TDKEDGTPLGKSTLPPTFP-PCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASP--AGKDEYAQWIVAS  301 (555)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~p-~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~--~~~~~~~~~~~~~  301 (555)
                      ....+      ...+.|+| |+|++++|++|+||+++|++.+|+.||.||+|+.+|++|+.|++.  ++++.|.+|+.+.
T Consensus       111 ~~~~~------~~~~~p~p~~~tl~~lL~~~~Di~~~p~k~~l~~La~~a~~~~~k~~L~~l~~~~~~~~~~y~~~~~~~  184 (279)
T d1ja1a1         111 NLDEE------SNKKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEA  184 (279)
T ss_dssp             ESCTT------CSCCCSSSSSEEHHHHHHHTBCCSSCCCHHHHHHHGGGBCSHHHHHHHHGGGCSSSHHHHHHHHHTTTT
T ss_pred             cCCCc------cccccCCCCchhHHHHHHhhccccCCCcHHHHHHHHHHcCChHHHHHHHHHhcCcHHHHHHHHHHHHhc
Confidence            65432      23456788 999999999999999999999999999999999999999999764  4678999999999


Q ss_pred             CCCHHHHHhhCCCCCCChHHHHHHhcCCCcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhccCCCCc
Q 008747          302 QRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEK  381 (555)
Q Consensus       302 ~~~~~dvl~~f~s~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~~~~~~~  381 (555)
                      +++++|+|.+||++++|++.|++. +|+++||+|||||||..++++++|||++|.+.++.|+.+.|+||+||.++.++++
T Consensus       185 ~~~ildlL~~fps~~~pl~~ll~~-lp~L~PR~YSISSSp~~~p~~v~ltv~vV~y~~~~g~~r~GvcS~~L~~l~~~~~  263 (279)
T d1ja1a1         185 RRHILAILQDYPSLRPPIDHLCEL-LPRLQARYYAIASSSKVHPNSVHICAVAVEYEAKSGRVNKGVATSWLRAKEPAGE  263 (279)
T ss_dssp             TCCHHHHHHHSTTBCCCHHHHHHH-SCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSEEECHHHHHHHHCCCCST
T ss_pred             CCCHHHHHhhCcccCCCHHHHHHh-CccCCCceeeEecCcccCCCEEEEEEEEEEeecCCCCcccccchHHHhhcCCCCC
Confidence            999999999999999999999976 5999999999999999999999999999999999999999999999999998877


Q ss_pred             CCCCceeeEEEecCCC
Q 008747          382 SNDCSWAPIFVRQSNF  397 (555)
Q Consensus       382 ~~~~~~v~v~~~~~~F  397 (555)
                      ...+..++|+++.++|
T Consensus       264 ~~~~~~vpifir~s~F  279 (279)
T d1ja1a1         264 NGGRALVPMFVRKSQF  279 (279)
T ss_dssp             TSSCCEEEEEEECCSC
T ss_pred             cCCceEEEEEEcCCCC
Confidence            6556679999999887
>d1f20a1 b.43.4.1 (A:963-1232) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ja1a3 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ddga1 b.43.4.1 (A:226-446) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f20a2 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ddga2 c.25.1.4 (A:447-599) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fnda2 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodoxin reductase) {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d1jb9a2 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodoxin reductase) {Maize (Zea mays), root isoform [TaxId: 4577]} Back     information, alignment and structure
>d2bmwa2 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodoxin reductase) {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Back     information, alignment and structure
>d1ja1a2 c.23.5.2 (A:63-239) NADPH-cytochrome p450 reductase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ykga1 c.23.5.2 (A:63-208) Sulfite reductase alpha-component CysJ N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tlla2 c.23.5.2 (A:750-951) Nitric oxide (NO) synthase FMN domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1bvyf_ c.23.5.1 (F:) FMN-binding domain of the cytochrome P450bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Back     information, alignment and structure
>d1krha2 c.25.1.2 (A:206-338) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Back     information, alignment and structure
>d1f4pa_ c.23.5.1 (A:) Flavodoxin {Desulfovibrio vulgaris [TaxId: 881]} Back     information, alignment and structure
>d1qfja2 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fdra2 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodoxin reductase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gvha3 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1cqxa3 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal domain {Alcaligenes eutrophus [TaxId: 106590]} Back     information, alignment and structure
>d2fcra_ c.23.5.1 (A:) Flavodoxin {Chondrus crispus [TaxId: 2769]} Back     information, alignment and structure
>d2piaa2 c.25.1.2 (A:104-223) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Back     information, alignment and structure
>d1yoba1 c.23.5.1 (A:1-179) Flavodoxin {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1umka2 c.25.1.1 (A:154-300) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jb9a1 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Maize (Zea mays), root isoform [TaxId: 4577]} Back     information, alignment and structure
>d2cnda2 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1czna_ c.23.5.1 (A:) Flavodoxin {Synechococcus elongatus PCC 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1rlja_ c.23.5.7 (A:) Flavoprotein NrdI {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ag9a_ c.23.5.1 (A:) Flavodoxin {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a8pa2 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodoxin reductase) {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1fnda1 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Back     information, alignment and structure
>d1oboa_ c.23.5.1 (A:) Flavodoxin {Anabaena, pcc 7119 and 7120 [TaxId: 1163]} Back     information, alignment and structure
>d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Back     information, alignment and structure
>d1fuea_ c.23.5.1 (A:) Flavodoxin {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d2fz5a1 c.23.5.1 (A:1-137) Flavodoxin {Megasphaera elsdenii [TaxId: 907]} Back     information, alignment and structure
>d5nula_ c.23.5.1 (A:) Flavodoxin {Clostridium beijerinckii [TaxId: 1520]} Back     information, alignment and structure
>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]} Back     information, alignment and structure
>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]} Back     information, alignment and structure
>d1fdra1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qfja1 b.43.4.2 (A:1-97) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a8pa1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1cqxa2 b.43.4.2 (A:151-261) Flavohemoglobin, central domain {Alcaligenes eutrophus [TaxId: 106590]} Back     information, alignment and structure
>d1krha1 b.43.4.2 (A:106-205) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Back     information, alignment and structure
>d2piaa1 b.43.4.2 (A:1-103) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Back     information, alignment and structure
>d2cnda1 b.43.4.2 (A:11-124) Nitrate reductase core domain {Corn (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1tvca1 b.43.4.2 (A:2-110) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Back     information, alignment and structure
>d1gvha2 b.43.4.2 (A:147-253) Flavohemoglobin, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ep3b1 b.43.4.2 (B:2-102) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Back     information, alignment and structure
>d1umka1 b.43.4.2 (A:30-153) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2arka1 c.23.5.8 (A:1-184) Flavodoxin FldA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1nni1_ c.23.5.4 (1:) Azobenzene reductase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1sqsa_ c.23.5.5 (A:) Hypothetical protein SP1951 {(Streptococcus pneumoniae) [TaxId: 1313]} Back     information, alignment and structure
>d1rtta_ c.23.5.4 (A:) Hypothetical protein PA1204 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1t0ia_ c.23.5.4 (A:) Hypothetical protein Ylr011wp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2z98a1 c.23.5.3 (A:1-200) ACP phosphodiesterase AcpD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure