Citrus Sinensis ID: 008862


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550
MGRYYYQRYLKLKKAMQQIPFREHFVNDGDGDDDDDEESRAGAAALVFVCAPPSYHNKRSSSTTSRTKLLSLLLLSLLSCTFILTPHALSLFSFADSFGAEDEGLVAADVNAPLCSSISNGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRISQNCHHQSQ
ccccHHHHHHHHHHcccccccccccccccccccccHHHHHccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEccccccccEEEEcccEEEEccccEEEEEEcccccccccccHHHHHcccccccccccccccccccccEEEEEEccccccccccccccEEEEccEEEEEEccccccccHHHHHccHHHHHHccccccEEEEEEEcccccccccHHHHHHHHcccccccccccccEEEEcEEEEEcccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccccccccccccccEEEEEEcccccccccHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHcccEEEEEcHHHHHHHcccccccEEEEEEcccccccccccHHHHHHHccccEEEEEEccccccccccccccccccccccccccccccccHHHccccccEEEEHHHHHHHHHHHHHHHHHHcccccccccc
ccccccEEHHHccccccccccccEEEEcccccccHHHHHHccccHHEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccccccccccccccccccEEEccccccccEEEEEccEEEcccccEEEEEccccccccccccccccccccccEEccccccccHHHHcccEEEEEEEcccccccccccccEccccEEEEEccccccccccccccEEEEEEEEHHHccccEEEEEEcccHHHHHHHHHHHHHHccccEEEccccccEEccccEEEEEEccccccEccccccccccHHHHHHHHHHHHccccHccccccccHHHHHcccccccccccccccccccccccccEEEEEEccccEEEEcHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHcccEEEEEcccccHcEEEcccccEEEEEEcccHHHHHHHHccccHHHcccEEEEEEEccccccHHHHccccccccccHHHHHHccHHHHHHHHHccccEEEcHHHHHHHHHHHHHHHHHHHHcccccccc
MGRYYYQRYLKLKKAMQqipfrehfvndgdgdddddeeSRAGAAALVFvcappsyhnkrsssttSRTKLLSLLLLSLLSCtfiltphalslfsfadsfgaedeglvaadvnaplcssisngticcdrsgirtdvcimkgdvrtnsassSIFLYKNTNGFINYVSSMVEEKelqhekirpytrkwetsVMDTIDELDLVVKKEnetanhhcdvvhdvpavffstggytgnvyhefndgilplyitsqHLKKKVVFVILEYHNWWIMKYGDILsrlsdyppidfsgdkrthcfpeaivglrihdeltvdpslmrgnknaidFRNVLDQAYWPRIRGLIQDEEREAREklslspssdpsfknvkevqgdqskkpklvILSRngsraitnenSLVKMAEDIgfqvqvvrpdrTSELAKIYRALNSSDVMVGVHGAAMTHFlfmkpgsvfiqviplgtdwaaetyygeparklglkyigytilpresslydqydkndpvlrdpssvnekgwQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSInrisqnchhqsq
MGRYYYQRYLKLKKAMQQIPFREHFVNDGDGDDDDDEESRAGAAALVfvcappsyhnkrsssttSRTKLLSLLLLSLLSCTFILTPHALSLFSFADSFGAEDEGLVAADVNAPLCSsisngticcdrsgIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKelqhekirpytrkwetsvmDTIDELDLVVKKENEtanhhcdvvhDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSlmrgnknaIDFRNVLDQAYWPRIRGLIQDEEREAREKlslspssdpsfknvkevqgdqskkpklvilsrngsraitnenslvkmaediGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKndpvlrdpssvnekgWQYTKtiyldgqnvrlNLRRFQKRLVRAYDYSinrisqnchhqsq
MGryyyqrylklkkAMQQIPFREHFVNdgdgdddddEESRAGAAALVFVCAPPSYHNkrsssttsrtkllsllllsllsCTFILTPHALSLFSFADSFGAEDEGLVAADVNAPLCSSISNGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRISQNCHHQSQ
***YYYQRYLKLKKAMQQIPFREHFV*****************AALVFVCAP**************TKLLSLLLLSLLSCTFILTPHALSLFSFADSFGAEDEGLVAADVNAPLCSSISNGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLI***************************************************NSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYD***********VNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRIS********
*****YQRYLKLKKAMQQI**********************************************RTKLLSLLLLSLLSCTFILTPHALSL*******************************ICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNG****************EKIRPYTRKWETSVMDTIDELDLVVK*****ANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVK****DQSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDY**************
MGRYYYQRYLKLKKAMQQIPFREHFVNDG***********AGAAALVFVCAPPS***********RTKLLSLLLLSLLSCTFILTPHALSLFSFADSFGAEDEGLVAADVNAPLCSSISNGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEE****************************KKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRIS********
**RYYYQRYLKLKKAMQQIPFREHFVNDGDGDDDDDEESRAGAAALVFVCAPPSYHNKRSSSTTSRTKLLSLLLLSLLSCTFILTPHALSLFSFADSFG********************NGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNT*****************HEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLI*******************************SKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRI*********
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGRYYYQRYLKLKKAMQQIPFREHFVNDGDGDDDDDEESRAGAAALVFVCAPPSYHNKRSSSTTSRTKLLSLLLLSLLSCTFILTPHALSLFSFADSFGAEDEGLVAADVNAPLCSSISNGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRISQNCHHQSQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query550 2.2.26 [Sep-21-2011]
A0JND3527 EGF domain-specific O-lin yes no 0.476 0.497 0.255 2e-11
Q5NDL2527 EGF domain-specific O-lin yes no 0.46 0.480 0.251 1e-10
Q5NDL1527 EGF domain-specific O-lin yes no 0.46 0.480 0.251 2e-10
Q5NDL0527 EGF domain-specific O-lin yes no 0.498 0.519 0.250 2e-10
Q5NDL9527 EGF domain-specific O-lin yes no 0.46 0.480 0.248 9e-10
Q8BYW9527 EGF domain-specific O-lin yes no 0.496 0.518 0.244 2e-09
Q5NDL3535 EGF domain-specific O-lin yes no 0.48 0.493 0.241 4e-09
Q5NDE3 579 Glycosyltransferase-like N/A no 0.403 0.383 0.242 3e-07
Q08CY9525 EGF domain-specific O-lin yes no 0.412 0.432 0.243 1e-06
Q5NDE4 590 Glycosyltransferase-like N/A no 0.374 0.349 0.221 3e-06
>sp|A0JND3|EOGT_BOVIN EGF domain-specific O-linked N-acetylglucosamine transferase OS=Bos taurus GN=EOGT PE=2 SV=1 Back     alignment and function desciption
 Score = 71.2 bits (173), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 138/321 (42%), Gaps = 59/321 (18%)

Query: 210 CDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKV---VFVILEYHNWWIMK 266
           CD+V + P  F        N+YH F D I  LYIT QH+       V+V++    W    
Sbjct: 227 CDIVIEKPTYFMKLDAGV-NMYHHFCDFI-NLYIT-QHVNNSFSTDVYVVM----WDTSS 279

Query: 267 YG------DILSRLSDYPPIDF-SGDKRTHCFPEAIVGL--RIHDELTVDPSLMRGNKNA 317
           YG      D     +DY  I   + D +  CF EAI  L  R+   L  +  L+ G +N 
Sbjct: 280 YGYGDLFSDTWKAFTDYDVIHLKTYDAKRVCFKEAIFSLLPRMRYGLFYNTPLISGCQNT 339

Query: 318 IDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSKKPKLVILS 377
                           GL +   +    +L+++             +G +  K ++ IL+
Sbjct: 340 ----------------GLFRAFSQHVLHRLNITQ------------EGPKGGKIRVTILA 371

Query: 378 RNGS-RAITNENSLVKMAEDIG-FQVQVVRPDRTSELAKI--YRALNSSDVMVGVHGAAM 433
           R+   R I N+N LV   + +  F+VQ+V   +  EL  +   R  +++D+ +G+HGA +
Sbjct: 372 RSTEYRKILNQNELVNALKTVSTFEVQIV-DYKYKELGFLDQLRITHNTDIFIGMHGAGL 430

Query: 434 THFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDP 493
           TH LF+   +   ++   G     E  Y + AR  G+ YI +    R++ ++ Q   + P
Sbjct: 431 THLLFLPDWAAVFELYNCGD----ERCYLDLARLRGVHYITWR---RQNKVFPQDKGHHP 483

Query: 494 VLRDPSSVNEKGWQYTKTIYL 514
            L +        +   + +YL
Sbjct: 484 TLGEHPKFTNYSFDVEEFMYL 504





Bos taurus (taxid: 9913)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -
>sp|Q5NDL2|EOGT_HUMAN EGF domain-specific O-linked N-acetylglucosamine transferase OS=Homo sapiens GN=EOGT PE=2 SV=1 Back     alignment and function description
>sp|Q5NDL1|EOGT_PANTR EGF domain-specific O-linked N-acetylglucosamine transferase OS=Pan troglodytes GN=EOGT PE=2 SV=1 Back     alignment and function description
>sp|Q5NDL0|EOGT_RAT EGF domain-specific O-linked N-acetylglucosamine transferase OS=Rattus norvegicus GN=Eogt PE=2 SV=1 Back     alignment and function description
>sp|Q5NDL9|EOGT_CANFA EGF domain-specific O-linked N-acetylglucosamine transferase OS=Canis familiaris GN=EOGT PE=2 SV=1 Back     alignment and function description
>sp|Q8BYW9|EOGT_MOUSE EGF domain-specific O-linked N-acetylglucosamine transferase OS=Mus musculus GN=Eogt PE=1 SV=1 Back     alignment and function description
>sp|Q5NDL3|EOGT_CHICK EGF domain-specific O-linked N-acetylglucosamine transferase OS=Gallus gallus GN=EOGT PE=2 SV=2 Back     alignment and function description
>sp|Q5NDE3|GTDC2_TETNG Glycosyltransferase-like domain-containing protein 2 OS=Tetraodon nigroviridis GN=gtdc2 PE=2 SV=1 Back     alignment and function description
>sp|Q08CY9|EOGT_XENTR EGF domain-specific O-linked N-acetylglucosamine transferase OS=Xenopus tropicalis GN=eogt PE=2 SV=1 Back     alignment and function description
>sp|Q5NDE4|GTDC2_TAKRU Glycosyltransferase-like domain-containing protein 2 OS=Takifugu rubripes GN=gtdc2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query550
255585488533 glycosyltransferase, putative [Ricinus c 0.947 0.977 0.663 0.0
317106706530 JHL06B08.8 [Jatropha curcas] 0.936 0.971 0.674 0.0
224139884444 predicted protein [Populus trichocarpa] 0.776 0.961 0.770 0.0
356504769537 PREDICTED: uncharacterized glycosyltrans 0.905 0.927 0.665 0.0
356572020530 PREDICTED: uncharacterized glycosyltrans 0.909 0.943 0.658 0.0
357509679541 Glycosyltransferase [Medicago truncatula 0.88 0.894 0.657 0.0
56409840541 glycosyltransferase [Medicago truncatula 0.88 0.894 0.655 0.0
224086964413 predicted protein [Populus trichocarpa] 0.743 0.990 0.782 0.0
225441880529 PREDICTED: uncharacterized protein LOC10 0.929 0.965 0.635 0.0
297817062512 hypothetical protein ARALYDRAFT_486181 [ 0.825 0.886 0.629 1e-179
>gi|255585488|ref|XP_002533436.1| glycosyltransferase, putative [Ricinus communis] gi|223526710|gb|EEF28943.1| glycosyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  723 bits (1865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/556 (66%), Positives = 440/556 (79%), Gaps = 35/556 (6%)

Query: 5   YYQRYLKLKKAMQQIPFREHFVNDGDGDDDDDEESRAGAAALVFVCAPPSYHNKRSSSTT 64
           +Y RY +LKK      +  H    G+ D +          AL  VC    Y+ ++     
Sbjct: 3   HYHRYSQLKKD----EYHHHQQQHGEEDIE----------ALALVCGNSGYYKRK----- 43

Query: 65  SRTKLLSLLLLSLLSCTFILTPHAL---SLFSFADSFGAEDEGLVA-ADVNAPLCSSISN 120
            R KLLSLL LSLL C  IL PH     S FS   SF  E +G++   DVNA LCSSISN
Sbjct: 44  -RPKLLSLLFLSLLCCCLILAPHFFCSSSAFSLLYSFVVETDGVIGDVDVNASLCSSISN 102

Query: 121 GTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEE-KELQHEKIRP 179
           GT+CCDR   R+D+CIMKGD+RT+SASSS+ LY + N      SS++++ +E+QHEKI+P
Sbjct: 103 GTMCCDRRSFRSDICIMKGDIRTHSASSSVLLYTSRN-----TSSLIKDNEEIQHEKIKP 157

Query: 180 YTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGIL 239
           YTRKWETSVM TID+LDL++K+E  + NH CDV HDVPAVFFSTGGYTGNVYHEFNDGI+
Sbjct: 158 YTRKWETSVMGTIDQLDLILKQEKSSVNHRCDVKHDVPAVFFSTGGYTGNVYHEFNDGIV 217

Query: 240 PLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLR 299
           PLYITSQHLK+KVVFVILEYH WW+MKYGDILSRLSDYP ID+SGDKRTHCFPEAIVGLR
Sbjct: 218 PLYITSQHLKRKVVFVILEYHTWWMMKYGDILSRLSDYPAIDYSGDKRTHCFPEAIVGLR 277

Query: 300 IHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLS-----LSPSSD 354
           IHDELTVD SLM+GNK+ +DF N+LD+AY PRI+GLI++EE EA +KL      LSPSS+
Sbjct: 278 IHDELTVDSSLMKGNKSIVDFHNLLDKAYRPRIKGLIREEEHEALKKLKQKVLPLSPSSE 337

Query: 355 PSFKNVKEVQGDQSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAK 414
              +  K+VQ  + K+PKLVILSRN SRAITNE+ LVKMAE IGF+V+V+RP+RT+ELAK
Sbjct: 338 TLLEFRKDVQESKHKRPKLVILSRNASRAITNEDLLVKMAEGIGFRVEVLRPERTTELAK 397

Query: 415 IYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIG 474
           IYRALNSS+VM+GVHGAAMTHFLFMKPGSVFIQVIPLGT+WAAETYYGEPARKLGLKYIG
Sbjct: 398 IYRALNSSEVMIGVHGAAMTHFLFMKPGSVFIQVIPLGTEWAAETYYGEPARKLGLKYIG 457

Query: 475 YTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAY 534
           Y ILPRESSLYD+YDKNDPVL+DP+S++ KGWQYTKTIYLD QNVRL+L RFQK+LV AY
Sbjct: 458 YQILPRESSLYDKYDKNDPVLQDPASISNKGWQYTKTIYLDSQNVRLDLERFQKQLVLAY 517

Query: 535 DYSINRISQNCHHQSQ 550
           ++S+ +++ +  H S 
Sbjct: 518 EHSMKKMNHSSRHHSH 533




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317106706|dbj|BAJ53206.1| JHL06B08.8 [Jatropha curcas] Back     alignment and taxonomy information
>gi|224139884|ref|XP_002323324.1| predicted protein [Populus trichocarpa] gi|222867954|gb|EEF05085.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356504769|ref|XP_003521167.1| PREDICTED: uncharacterized glycosyltransferase AGO61-like [Glycine max] Back     alignment and taxonomy information
>gi|356572020|ref|XP_003554168.1| PREDICTED: uncharacterized glycosyltransferase AGO61-like [Glycine max] Back     alignment and taxonomy information
>gi|357509679|ref|XP_003625128.1| Glycosyltransferase [Medicago truncatula] gi|355500143|gb|AES81346.1| Glycosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|56409840|emb|CAI30145.1| glycosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|224086964|ref|XP_002308019.1| predicted protein [Populus trichocarpa] gi|222853995|gb|EEE91542.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225441880|ref|XP_002284307.1| PREDICTED: uncharacterized protein LOC100245312 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297817062|ref|XP_002876414.1| hypothetical protein ARALYDRAFT_486181 [Arabidopsis lyrata subsp. lyrata] gi|297322252|gb|EFH52673.1| hypothetical protein ARALYDRAFT_486181 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query550
TAIR|locus:2062709500 AT2G41640 [Arabidopsis thalian 0.458 0.504 0.634 2e-160
TAIR|locus:2082598504 AT3G57380 [Arabidopsis thalian 0.46 0.501 0.631 3.4e-156
TAIR|locus:2076274494 AT3G10320 [Arabidopsis thalian 0.658 0.732 0.638 2.6e-127
TAIR|locus:2063793452 AT2G03370 [Arabidopsis thalian 0.305 0.371 0.438 9.7e-72
TAIR|locus:2063809455 AT2G03360 [Arabidopsis thalian 0.3 0.362 0.416 1.1e-70
TAIR|locus:2092757384 AT3G18170 [Arabidopsis thalian 0.3 0.429 0.380 1.5e-57
TAIR|locus:2092762470 AT3G18180 [Arabidopsis thalian 0.309 0.361 0.375 4.4e-28
UNIPROTKB|F1SFQ3527 EOGT "Uncharacterized protein" 0.245 0.256 0.288 2.6e-11
UNIPROTKB|Q5NDL9527 EOGT "EGF domain-specific O-li 0.267 0.278 0.25 7.1e-10
WB|WBGene00010386523 H12D21.10 [Caenorhabditis eleg 0.301 0.317 0.247 2.4e-08
TAIR|locus:2062709 AT2G41640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 882 (315.5 bits), Expect = 2.0e-160, Sum P(2) = 2.0e-160
 Identities = 170/268 (63%), Positives = 207/268 (77%)

Query:    80 CTFILTPHAL---SLFSFADSFGAEDEGLVAAD-VNAPLCSSISNGTICCDRSGIRTDVC 135
             C F+L+P+ L   S  S  DSF  E EGL + + V  PLCS ISNGTICCDR+G+R+D+C
Sbjct:    52 CCFVLSPYYLFGFSTLSLLDSFRREIEGLSSYEPVITPLCSEISNGTICCDRTGLRSDIC 111

Query:   136 IMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDEL 195
             +MKGDVRTNSASSSIFL+ ++                + EKI+PYTRKWETSVMDT+ EL
Sbjct:   112 VMKGDVRTNSASSSIFLFTSSTN-----------NNTKPEKIKPYTRKWETSVMDTVQEL 160

Query:   196 DLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFV 255
             +L+ K  N++++  CDV HDVPAVFFSTGGYTGNVYHEFNDGI+PL+ITSQH  KKVVFV
Sbjct:   161 NLITKDSNKSSDRVCDVYHDVPAVFFSTGGYTGNVYHEFNDGIIPLFITSQHYNKKVVFV 220

Query:   256 ILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNK 315
             I+EYH+WW MKYGD++S+LSDYP +DF+GD RTHCF EA VGLRIHDELTV+ SL+ GN+
Sbjct:   221 IVEYHDWWEMKYGDVVSQLSDYPLVDFNGDTRTHCFKEATVGLRIHDELTVNSSLVIGNQ 280

Query:   316 NAIDFRNVLDQAYWPRIRGLIQDEEREA 343
               +DFRNVLD+ Y  RI+ L Q EE EA
Sbjct:   281 TIVDFRNVLDRGYSHRIQSLTQ-EETEA 307


GO:0005576 "extracellular region" evidence=ISM
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA
GO:0010200 "response to chitin" evidence=RCA
TAIR|locus:2082598 AT3G57380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076274 AT3G10320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063793 AT2G03370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063809 AT2G03360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092757 AT3G18170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092762 AT3G18180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1SFQ3 EOGT "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q5NDL9 EOGT "EGF domain-specific O-linked N-acetylglucosamine transferase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
WB|WBGene00010386 H12D21.10 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00160503
hypothetical protein (444 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query550
pfam04577206 pfam04577, DUF563, Protein of unknown function (DU 4e-16
COG4421368 COG4421, COG4421, Capsular polysaccharide biosynth 5e-04
>gnl|CDD|218156 pfam04577, DUF563, Protein of unknown function (DUF563) Back     alignment and domain information
 Score = 76.7 bits (189), Expect = 4e-16
 Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 12/113 (10%)

Query: 368 SKKPKLVILSR--NGSRAITNENSLVKMAEDIGFQVQVVRPDRTS--ELAKIYRALNSSD 423
             KP+ V +SR   G R I NE+ L +     GF++  V P+  S  E  K++    S+ 
Sbjct: 99  KIKPRKVYISRKKAGRRRILNEDELEEALPKYGFEI--VDPETLSLEEQVKLFS---SAK 153

Query: 424 VMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYT 476
           V+VG HG+A+T+ +FM PG+  ++++P       +  +   A  LGL Y    
Sbjct: 154 VIVGPHGSALTNLIFMPPGTGVVELVPPNR---LDPSFRNLAALLGLDYYYVY 203


Family of uncharacterized proteins. Length = 206

>gnl|CDD|226845 COG4421, COG4421, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 550
KOG4698475 consensus Uncharacterized conserved protein [Funct 100.0
PF04577206 DUF563: Protein of unknown function (DUF563); Inte 99.95
COG4421368 Capsular polysaccharide biosynthesis protein [Carb 99.7
cd05212140 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom 80.29
PF02882160 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl 80.14
>KOG4698 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=6.4e-83  Score=674.83  Aligned_cols=446  Identities=46%  Similarity=0.729  Sum_probs=392.6

Q ss_pred             cCCCCccccchhHHHHHHHHHHHHHhhcCCcchhhc---cccccCcccccccc-cccCCCCcccCCCCceeecCCCCCcc
Q 008862           58 KRSSSTTSRTKLLSLLLLSLLSCTFILTPHALSLFS---FADSFGAEDEGLVA-ADVNAPLCSSISNGTICCDRSGIRTD  133 (550)
Q Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~Cd~s~~r~d  133 (550)
                      |+...+.-.||.-+-=+++++.+|++..|..+.+-.   .++....+.+.... ...+.++|+..+++.++||+++.++|
T Consensus        17 ~~~~~~~~~~~~f~~~~~~vl~~~~v~kp~~l~~~~~~~~~~tg~~~~~~~~~~~~~~q~~~~~~e~~~~~C~~~g~~s~   96 (475)
T KOG4698|consen   17 KKNLLGLLIYGVFHSSLLSVLPKCVVVKPYLLLLPRFQPDLPTGSFEDELLPLSQLLRQPPGSALEDSSFFCDRSGTRSD   96 (475)
T ss_pred             hhcCccceecCcchhhhhhhcccceecCCeecccCccccCcccceeeccCCChhhcccCCCCcccCCceEEeeccccccc
Confidence            333334444444444467899999999888766322   22323345554444 44557999999999999999999999


Q ss_pred             eeEEeCcEEeeCCCceEEEEecCCCcccccccchhhcccceeeecCCCCCCcccccCccceeEEEeccCCCcCCCCCcee
Q 008862          134 VCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVV  213 (550)
Q Consensus       134 ~C~~~GdvR~~~~~~tv~l~~~~~~~~~~~~~~~~~~~~~~~~irPY~RK~~~~~m~~v~Evtv~~~~~~~~~~p~C~v~  213 (550)
                      +|+|+||+|+|+.++|+++....--         ++-.+.+|+||||+||||..+|..|+|+++...+.+  ...+|+++
T Consensus        97 ~c~~kg~~r~h~~~~~~~~~~~~~~---------~~s~~~~e~ikpy~rk~~~~vmp~vre~~l~~~~~~--~~r~c~v~  165 (475)
T KOG4698|consen   97 FCEMKGDVRTHPDSSTVLLTLGRLL---------TFSGRLVEKIKPYTRKGETWVMPEVRELNLLVRPGS--EIRRCDVN  165 (475)
T ss_pred             hhhhcCccccCcchhhhhhhccchh---------hhccccchhcccccccccccccccccccceEEcCCc--ccceeeee
Confidence            9999999999999999987765311         011357999999999999999999999999988743  45789999


Q ss_pred             eecceEEEEcCCccccccchhhhhhhhHHhhHh--hcCCeeEEEEecccchhhccHHHHHHhcCCCCCcccCCCCcceee
Q 008862          214 HDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQ--HLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCF  291 (550)
Q Consensus       214 h~~Pavvfs~ggytgN~fH~f~D~liPLfiT~~--~f~~~Vq~vi~d~~~ww~~kY~~ll~~LS~y~vIdl~~d~~v~CF  291 (550)
                      |++||+||++|||+||.||+|+|+++|||+|.+  .|+++||+|+++.++||+.||.+++++||+||+++++++..+|||
T Consensus       166 ~~~pa~vfs~Gg~tgn~yhdf~d~~ipL~it~~~~~~n~ev~~li~~~~~ww~~kf~Dvv~~lSn~~~v~~~~~~~ThcF  245 (475)
T KOG4698|consen  166 HEVPAIVFSTGGYTGNEYHDFNDGIIPLFITEAELRFNKEVQFLITETHSWWDMKFGDVVRQLSNYPVVDFDAELRTHCF  245 (475)
T ss_pred             cccchheeecCCcchhhHHHHHhhhhhhhcccchhcccccEEEEEEEcchhhhhhHHHHHHhcCCCceEEecCCceEEEe
Confidence            999999999999999999999999999999999  789999999999999999999999999999999999999999999


Q ss_pred             CeeEEccccccccccCCCCCCCC--ccHHHHHHHHHHhhccccccccchHHHHHHHhccCCCCCCCCCCccccccCCCCC
Q 008862          292 PEAIVGLRIHDELTVDPSLMRGN--KNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSK  369 (550)
Q Consensus       292 ~~aiVGL~~h~~L~idp~~~p~~--~si~dFr~FLr~ay~~r~~~L~~~~~r~~~~~l~i~p~g~~~~~~~~~~~~~~~~  369 (550)
                      .+++|||..|.++++||...+++  ++|.+|++||..+|++|+...            +++             ..+..+
T Consensus       246 ~~~~vgL~~h~~y~v~~t~~~~~~~~s~~~fr~~l~~a~~~~i~~~------------~~t-------------~~~~~k  300 (475)
T KOG4698|consen  246 KEAIVGLVSHFPYAVNPTQPPPNGTLSMLDFRNLLDKALSPRIPEA------------NVT-------------APEPWK  300 (475)
T ss_pred             eeeeeeeeecccccccCCcCCCccccccccHHHHHHHHhccccccc------------ccC-------------CcChhh
Confidence            99999999999999999998866  899999999999999775311            100             122456


Q ss_pred             CCEEEEEEcCCCccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhhhhhhhccCCCcEEEEEe
Q 008862          370 KPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVI  449 (550)
Q Consensus       370 rprlviIsR~~sR~IlNe~evv~~l~~~Gf~V~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAGLTN~lFmppga~VIEI~  449 (550)
                      +||+++++|.++|.|+|++||.+++++.||+|.+++++. .++++|+++.+++|||||||||||||++|+||++++|||.
T Consensus       301 kpri~~lsR~~~r~Ilne~el~~~~~~~gf~v~~~~~~~-t~v~~~~~i~~s~~vmiGvHGa~lth~lfl~~~~~~iqi~  379 (475)
T KOG4698|consen  301 KPRITILSRAGSRAILNEDELPRMLEDIGFEVSVLRPDR-TEVAKQLRITNSSDVMIGVHGAGLTHLLFLPPWAGVIQIY  379 (475)
T ss_pred             CCceEEEecccchhhhcchhhhHHHHhCCCceEEecccc-cchhhhhheeeccceeeeccCccceeEEecCCcceEEEEE
Confidence            899999999999999999999999999999999999854 9999999999999999999999999999999999999999


Q ss_pred             cCC-CCcccccchHHHHhhcCCceEEEEecCCCCcccccCCCCCCccCCCCcccccCcceee-eeecCCccEEEehHHHH
Q 008862          450 PLG-TDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTK-TIYLDGQNVRLNLRRFQ  527 (550)
Q Consensus       450 P~g-~~~~~~~~Y~~~A~~~Gl~Y~~y~i~~eEssL~~~y~~dh~v~~dP~~i~~kgW~~~~-~~yL~~QnV~lDi~rF~  527 (550)
                      |+| ..|.+..+|..+|+.|+++|.+|+|.++|++|.++|++||+++.||.+..++||+.++ .+||..|+|++|+.||+
T Consensus       380 pcg~~~w~a~~a~~~p~k~~~l~y~~ykI~~~es~l~~~y~~d~~~v~dp~s~~~~~f~~~k~~~yl~~q~v~ld~nRf~  459 (475)
T KOG4698|consen  380 PCGDPGWAAKLARLRPAKYMTLEYAEYKIRAEESELYHKYGGDNTIVFDPISFQKKGFEETKKKVYLELQAVRLDINRFR  459 (475)
T ss_pred             ECCCccchhhhhhccccceeccccceeEEeecccceeeeccCCCceecccceeccccceeeeeeeeEeEeeeehhhhhcc
Confidence            999 8999999999999999999999999999999999999999999999999999999987 89999999999999999


Q ss_pred             HHHHHHHHHHHhh
Q 008862          528 KRLVRAYDYSINR  540 (550)
Q Consensus       528 ~~L~~A~~~l~~~  540 (550)
                      +.+.+|+...+.+
T Consensus       460 ~~~~~a~~~~~~~  472 (475)
T KOG4698|consen  460 KTLVKAYLKEITQ  472 (475)
T ss_pred             cchhHHHHHHHHh
Confidence            9999999887765



>PF04577 DUF563: Protein of unknown function (DUF563); InterPro: IPR007657 This is a family of uncharacterised glycosyltransferases belonging to glycosyltransferase family 61 Back     alignment and domain information
>COG4421 Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase Back     alignment and domain information
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query550
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-07
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 51.0 bits (121), Expect = 8e-07
 Identities = 76/483 (15%), Positives = 151/483 (31%), Gaps = 130/483 (26%)

Query: 184 WETSVMDTIDELDLV-VKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFND--GILP 240
           +ET       + D++ V ++    N  C  V D+P    S      ++    +   G L 
Sbjct: 9   FETGEHQYQYK-DILSVFEDAFVDNFDCKDVQDMPKSILSKEEID-HIIMSKDAVSGTLR 66

Query: 241 LYITSQHLKKKVV--FV--ILEYHNWWIM---------------KYGDILSRLSDYPPID 281
           L+ T    ++++V  FV  +L  +  ++M                Y +   RL +   + 
Sbjct: 67  LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV- 125

Query: 282 FSGDKRTHCFPEAIVGLRIH-DELTVDPSL----MRGN-K-----NAIDFRNVL----DQ 326
           F+  K      +  + LR    EL    ++    + G+ K     +      V      +
Sbjct: 126 FA--KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK 183

Query: 327 AYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSKKPKLVILSRNG--SRAI 384
            +W  +       E        L    DP++ +    + D S   KL I S      R +
Sbjct: 184 IFWLNL-KNCNSPETVLEMLQKLLYQIDPNWTS----RSDHSSNIKLRIHSIQAELRRLL 238

Query: 385 TNE---NSL-----VKMAEDI---GFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAM 433
            ++   N L     V+ A+         +++   R  ++     A  ++ + +  H   +
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298

Query: 434 THF----LFMK---------PGSVFIQVIPLGTDWAAETYYGEPAR-------------- 466
           T      L +K         P  V +   P      AE+     A               
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREV-LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357

Query: 467 --KLGLK----------YIGYTILPRE--------SSLYDQYDKNDPV-----LRDPSSV 501
             +  L           +   ++ P          S ++    K+D +     L   S V
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLV 417

Query: 502 NEKGWQYTKTI---YLDGQNVRLNLRRFQKRLVRAYD----YSINRISQNC--------- 545
            ++  + T +I   YL+ +    N     + +V  Y+    +  + +             
Sbjct: 418 EKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477

Query: 546 -HH 547
            HH
Sbjct: 478 GHH 480


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query550
d1gdha2129 D-glycerate dehydrogenase {Hyphomicrobium methylov 80.98
>d1gdha2 c.23.12.1 (A:2-100,A:292-321) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Formate/glycerate dehydrogenase catalytic domain-like
family: Formate/glycerate dehydrogenases, substrate-binding domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=80.98  E-value=3.8  Score=33.97  Aligned_cols=91  Identities=14%  Similarity=0.203  Sum_probs=65.2

Q ss_pred             CCEEEEEEcCCCccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhhhhhhhc--cCCCcEEEE
Q 008862          370 KPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLF--MKPGSVFIQ  447 (550)
Q Consensus       370 rprlviIsR~~sR~IlNe~evv~~l~~~Gf~V~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAGLTN~lF--mppga~VIE  447 (550)
                      ||||++. +    .+  .++.++.+++. |+|+....+..++-+|.++.+.++|++|...+..++.-+|  +|++=.+|-
T Consensus         1 K~kVlit-~----~~--~~~~~~~l~~~-~~v~~~~~~~~~s~~el~~~~~~~d~ii~~~~~~i~~~~l~~~~~~LK~I~   72 (129)
T d1gdha2           1 KKKILIT-W----PL--PEAAMARARES-YDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRIPENIKCIS   72 (129)
T ss_dssp             CCEEEES-S----CC--CHHHHHHHHTT-SEEEECCSTTCCCHHHHHHHHTTCSEEEEETTSCBCHHHHHHSCTTCCEEE
T ss_pred             CCEEEEe-C----CC--CHHHHHHHHcC-CcEEEeCCCCCCCHHHHHHHhcCCCEEEEcCCchhhhHHHhhhhhcceeee
Confidence            5787643 2    22  44677788765 5877655445689999999999999998888888999988  666777777


Q ss_pred             EecCCCCcccccchHHHHhhcCCce
Q 008862          448 VIPLGTDWAAETYYGEPARKLGLKY  472 (550)
Q Consensus       448 I~P~g~~~~~~~~Y~~~A~~~Gl~Y  472 (550)
                      -+--|+++..    -..|+..|+.-
T Consensus        73 ~~gvG~d~ID----~~~a~~~gI~V   93 (129)
T d1gdha2          73 TYSIGFDHID----LDACKARGIKV   93 (129)
T ss_dssp             EESSCCTTBC----HHHHHHTTCEE
T ss_pred             ecccCCcccc----HHHHHhCCCEE
Confidence            7777765443    24566677764