Citrus Sinensis ID: 008885
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 550 | 2.2.26 [Sep-21-2011] | |||||||
| Q84WU9 | 596 | Zinc finger CCCH domain-c | yes | no | 0.965 | 0.890 | 0.711 | 0.0 | |
| Q69NK8 | 613 | Zinc finger CCCH domain-c | yes | no | 0.965 | 0.866 | 0.588 | 0.0 | |
| Q5RGJ5 | 544 | CWF19-like protein 1 OS=D | yes | no | 0.836 | 0.845 | 0.298 | 2e-59 | |
| Q8AVL0 | 540 | CWF19-like protein 1 OS=X | N/A | no | 0.841 | 0.857 | 0.307 | 2e-57 | |
| O16216 | 533 | CWF19-like protein 1 homo | yes | no | 0.82 | 0.846 | 0.285 | 5e-50 | |
| Q8CI33 | 537 | CWF19-like protein 1 OS=M | yes | no | 0.821 | 0.841 | 0.280 | 5e-41 | |
| Q5R8R4 | 538 | CWF19-like protein 1 OS=P | yes | no | 0.530 | 0.542 | 0.334 | 5e-37 | |
| Q69YN2 | 538 | CWF19-like protein 1 OS=H | yes | no | 0.827 | 0.845 | 0.282 | 6e-37 | |
| A1Z8J0 | 545 | CWF19-like protein 1 homo | yes | no | 0.505 | 0.510 | 0.342 | 7e-36 | |
| Q10414 | 561 | CWF19-like protein mug161 | yes | no | 0.787 | 0.771 | 0.24 | 6e-28 |
| >sp|Q84WU9|C3H64_ARATH Zinc finger CCCH domain-containing protein 64 OS=Arabidopsis thaliana GN=At5g56900 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/540 (71%), Positives = 447/540 (82%), Gaps = 9/540 (1%)
Query: 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
PRILLCGD LGRLNQLFKRVQSV+KSAGPFDA++CVGQFFPDS E+LDEF++YVEGR+++
Sbjct: 3 PRILLCGDPLGRLNQLFKRVQSVSKSAGPFDALICVGQFFPDSPEILDEFLDYVEGRAQV 62
Query: 64 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL 123
PIPTYF GDYGV A K+L SK + NQGFKMDG +V NLFWL+GSG F+LHGLSVAYL
Sbjct: 63 PIPTYFTGDYGVVAPKILSTTSKKAENQGFKMDGLEVCHNLFWLRGSGKFSLHGLSVAYL 122
Query: 124 SGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDS 183
SGRQSSE Q FG YSQDDVDALRALAEEPG VDLFLTNEWP+GVTN+AA SD+ VGISDS
Sbjct: 123 SGRQSSESQ-FGKYSQDDVDALRALAEEPGGVDLFLTNEWPAGVTNRAAVSDIPVGISDS 181
Query: 184 SNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIH 243
S +DSTVSELV E+KPRYHIAGS GVFYAREPY N ++ HVTRF+GLA VGNK KQKF+H
Sbjct: 182 SCSDSTVSELVMEVKPRYHIAGSMGVFYAREPYLNAESTHVTRFIGLAQVGNKNKQKFLH 241
Query: 244 ALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQK 303
ALSPTP +TMS A++S K P TTL PY D + SK KRP+DS SDSQYWRYDV K
Sbjct: 242 ALSPTPTSTMSPAELSAKPPKTTLWPYNLQDGAAESK---KRPNDSDSDSQYWRYDVP-K 297
Query: 304 RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPEC 363
RQK G G+K+CFKF+ SGSCPRGE C+F+H+ +AREQC RGVCLD IIKGKCEKGPEC
Sbjct: 298 RQK-SGSQGEKLCFKFVCSGSCPRGEDCHFQHNAEAREQCRRGVCLDLIIKGKCEKGPEC 356
Query: 364 SYKHSLQNDDS-QRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLV 422
SYKH Q++ S QR RSEN ANRSKECWFCLSSPSVESHLIVSVGE +YCALPKG LV
Sbjct: 357 SYKHEFQDESSIQRKPRSEN--ANRSKECWFCLSSPSVESHLIVSVGESFYCALPKGSLV 414
Query: 423 EDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQ 482
EDH+L+IP+EH+PNT+ SPE E EL R+QN L YK+QG +AVFFE +SKR +HANLQ
Sbjct: 415 EDHILIIPIEHLPNTLVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELVSKRVSHANLQ 474
Query: 483 AVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEG 542
VP+P+S+A + +IF+LAAEKLGFK + K + S+DGR+ L+ +++ FYVELP+G
Sbjct: 475 VVPVPSSRARLLPNIFSLAAEKLGFKLVTKKFNDSTDGRKYLQKEYNAALGLFYVELPDG 534
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q69NK8|C3H59_ORYSJ Zinc finger CCCH domain-containing protein 59 OS=Oryza sativa subsp. japonica GN=Os09g0364000 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/544 (58%), Positives = 396/544 (72%), Gaps = 13/544 (2%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFF-PDSSELLD----EFMNYVEG 59
RILL GD GRL+QLFKRV SVN+S GPF A+LCVGQFF PD+ + E +Y+EG
Sbjct: 15 RILLAGDANGRLHQLFKRVTSVNQSTGPFHALLCVGQFFSPDAGDGDGGGGGEVADYLEG 74
Query: 60 RSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLS 119
R+ +PIPTYF GDYG A ++L A+ S+ +GF G ++ NLFWL+GS FTLHGLS
Sbjct: 75 RAAVPIPTYFTGDYGPAAPRLLAKAA--SSARGFSPGGIQICPNLFWLRGSARFTLHGLS 132
Query: 120 VAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVG 179
V YLSGR+ G G YSQDDVDALRALAEEPGIVDLFLTNEWP+GV N S+
Sbjct: 133 VVYLSGRKGPGGP--GCYSQDDVDALRALAEEPGIVDLFLTNEWPAGVVNGVDTSNAPSQ 190
Query: 180 ISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQ 239
ISD D V+ELVAEIKPRYHIAGSKGVFYAREPY + A HVTRF+GLA VGNKEKQ
Sbjct: 191 ISDPHGYDPVVAELVAEIKPRYHIAGSKGVFYAREPYVSDSAAHVTRFIGLANVGNKEKQ 250
Query: 240 KFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYD 299
KFIHA+SPTPA+TMS+ DI + PNTTLSPY + +E KRP++ +D QYWRYD
Sbjct: 251 KFIHAISPTPASTMSSVDIHARPPNTTLSPYISPAKSVPVEETPKRPAED-ADLQYWRYD 309
Query: 300 VSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEK 359
V K+Q+HG G+++CFKF SGSCPRG KCN+RHD +ARE R VC DF+ KGKCEK
Sbjct: 310 V--KKQRHGEAGGNRLCFKFTSSGSCPRGSKCNYRHDEEAREHYNRNVCFDFLNKGKCEK 367
Query: 360 GPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKG 419
GPEC + HSL ++ + R + + CWFCLSSP VESHL++S+GE YYCAL KG
Sbjct: 368 GPECRFAHSLSDEGAVRDTKPRSERRRVESSCWFCLSSPDVESHLVISIGEGYYCALAKG 427
Query: 420 PLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHA 479
PLV +HVLVIPVEH +T+ E E ELGR++++L Y++ QGK A++FEW+S++ HA
Sbjct: 428 PLVPNHVLVIPVEHCSSTLKMPVEAEAELGRYKDALAKYFEKQGKIAIYFEWVSQQSRHA 487
Query: 480 NLQAVPIPTSKAAAVQDIFNLAAEKLGFKF-LATKSSKSSDGRRSLRAQFDRNCSFFYVE 538
NLQAVP+P SKA++V+ IF+LAA++LGF+F + ++ R LR++ D S FYVE
Sbjct: 488 NLQAVPVPLSKASSVKKIFHLAAQRLGFEFSVVNPDGDANRARELLRSECDSKSSLFYVE 547
Query: 539 LPEG 542
LPEG
Sbjct: 548 LPEG 551
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Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q5RGJ5|C19L1_DANRE CWF19-like protein 1 OS=Danio rerio GN=cwf19l1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 166/556 (29%), Positives = 258/556 (46%), Gaps = 96/556 (17%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV GR+N LF RV ++ K +G FD +LCVG FF S E E+ Y G +
Sbjct: 5 PLRVLACGDVEGRINALFNRVNAIQKKSGQFDLLLCVGDFFGSSPEAEAEWATYKSGAKK 64
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI T +G AAS+ + DG ++ +N+ L G FT GL +A
Sbjct: 65 APIHTCILG-----------AASQETVKYFPSSDGCELAENITCLGRRGIFTGASGLQIA 113
Query: 122 YLSGRQS-SEGQQFGTYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTN--KAAASD 175
Y+SGR++ E ++ D+ AL A L VD+ LT++WP GV + +D
Sbjct: 114 YVSGREAHQEPAPSHCFTPKDITALVAPLLSNSKFRGVDILLTSQWPRGVCQYGNSPETD 173
Query: 176 M-LVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLG 229
M G+S ++++L ++KPRYH AG +GV Y R PY N + HV+RF+
Sbjct: 174 MKFCGVS-------SIADLADKLKPRYHFAGLEGVHYERLPYRNHVVLQENTQHVSRFIA 226
Query: 230 LAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDS 289
LA V N K+K+++A + P M + ++ + + T +PY L
Sbjct: 227 LATVNNPAKKKYLYAFNIIPMKNMDSTELVKQPQDVTENPYRKL---------------- 270
Query: 290 VSDSQYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCL 349
+ D + R S TDA+E+
Sbjct: 271 MKDGKKERQSASM----------------------------------TDAQEEPASQFFF 296
Query: 350 DFIIKGKCEKGPECSYKHSLQND-DSQRTHRSENASANRSKECWFCLSSPSVESHLIVSV 408
D +K P+ + Q+D D H+ + CWFCL+SP VE HL++S+
Sbjct: 297 DL-----GQKNPQRQHGRKRQSDGDRPNQHKQPRRPPQPTGPCWFCLASPEVEKHLVISI 351
Query: 409 GEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVF 468
G + Y AL KG L DHVL++P+ H + + + E +E+ +++++ + K++GK V
Sbjct: 352 GTHCYMALAKGGLTPDHVLLLPIGHYQSVVDLASEVVEEMEKYKSAFKKFCKSKGKRCVL 411
Query: 469 FEWLSKRGTHANLQAVPIPTSKAAA--VQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRA 526
FE + R H LQAVP+P K + +++ F AE+ + + + L+
Sbjct: 412 FE-RNYRSQHLQLQAVPVPMEKCSTEDIKEAFMTQAEEQQMELMEIPA------HTDLKQ 464
Query: 527 QFDRNCSFFYVELPEG 542
+FYVEL G
Sbjct: 465 IAPPGTPYFYVELDTG 480
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Danio rerio (taxid: 7955) |
| >sp|Q8AVL0|C19L1_XENLA CWF19-like protein 1 OS=Xenopus laevis GN=cwf19l1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 173/562 (30%), Positives = 266/562 (47%), Gaps = 99/562 (17%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIP 64
R+L CGDV GR + LF RV+ + K +G FD +LCVG FF S E + Y G + P
Sbjct: 7 RVLTCGDVYGRFDVLFNRVRVIQKKSGQFDMLLCVGSFFGTSPESQTHWDEYKSGAKKAP 66
Query: 65 IPTYFIGDYGVGAAKVLLAASKNSANQGFK-MDGFKVTDNLFWLKGSGNFT-LHGLSVAY 122
I TY +G A+ + FK +DG ++ N+ +L G FT GL +AY
Sbjct: 67 IQTYVLG------------ANNQETVKHFKDVDGCELAANITYLGRKGLFTGASGLQIAY 114
Query: 123 LSG-RQSSEGQQFGTYSQDDVDALR-ALAEEPGI--VDLFLTNEWPSGVTNKAAASDMLV 178
LSG SSE ++ DV +L+ +L VD+ LT+ WP V+N A L
Sbjct: 115 LSGIESSSEPAPAYCFTAKDVTSLKMSLMSNSKFKGVDILLTSSWPKDVSNYGNA---LP 171
Query: 179 GISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLAPV 233
+ + +S L +KPRYH A +G Y R PY N +A HV+RF+ LA V
Sbjct: 172 NEASKKCGSALISNLAFNLKPRYHFAALEGENYERLPYRNHLVLQENAQHVSRFISLASV 231
Query: 234 GNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDS 293
GN +K+K+I+A + P + AD+ K+P D V+++
Sbjct: 232 GNLDKKKYIYAFNIVPMSLTDIADL------------------------VKQPLD-VTEN 266
Query: 294 QYWRYDVSQKRQK-HGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFI 352
Y + D + K + + ++ +F + + P+G+K TD
Sbjct: 267 PYRKSDKDTPKSKGNKSAEEEEPTQQFFFDLNKPQGKK----RQTDG------------- 309
Query: 353 IKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYY 412
KG + + KH + CWFCL+SP VE HL+VS+G+
Sbjct: 310 -KGGRQSQAKQPRKH-----------------PQPTGPCWFCLASPEVEKHLVVSIGDNC 351
Query: 413 YCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWL 472
Y AL KG L+ DHVL++P+ H +T+ S + KE+ +++ +L ++K +GK V FE
Sbjct: 352 YVALAKGGLMSDHVLILPIGHYQSTVDLSSDVVKEVEQYKAALRTFFKTKGKRYVMFE-R 410
Query: 473 SKRGTHANLQAVPIPTS--KAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDR 530
+ + H LQ VP+P S +++ F L A++ G + L + SD ++ +
Sbjct: 411 NYKSQHLQLQVVPLPLSCCTTEDIKETFILQAQEQGMELLEI--PEHSDIKQIAQP---- 464
Query: 531 NCSFFYVELPEG---FGRLAEH 549
+FYVEL G F R+ +H
Sbjct: 465 GTPYFYVELDSGEKLFHRIKKH 486
|
Xenopus laevis (taxid: 8355) |
| >sp|O16216|C19L1_CAEEL CWF19-like protein 1 homolog OS=Caenorhabditis elegans GN=F17A9.2 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 156/547 (28%), Positives = 242/547 (44%), Gaps = 96/547 (17%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIP 64
+IL CGDV G +L K++ + K GPFD++ CVG+FF D + ++ +N G E P
Sbjct: 7 KILCCGDVNGNFVELIKKISTTEKKNGPFDSLFCVGEFFGDDDDSNEKVIN---GNIEFP 63
Query: 65 IPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF-TLHGLSVAYL 123
IPTY +G + + + + + + NL +L G T GL +AYL
Sbjct: 64 IPTYILG------------PANPRYSYLYPEESIEFSSNLTYLGKKGLLNTASGLQIAYL 111
Query: 124 SGRQSSEGQQFGTYSQDDVDALR-ALAEEPGI--VDLFLTNEWPSGVTNKAAASDMLVGI 180
SG + S + + + DV+ L L + G D+ LT+ WP+ + +
Sbjct: 112 SGVEGS-SKDLSCFDKADVEELLIPLGTQVGFSGTDILLTSVWPADIARHSHNQP----- 165
Query: 181 SDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLAPVGN 235
S +S+L A +KPRYH AG GV Y R+PY N A H TRF+GLA +GN
Sbjct: 166 SKPQPGSVLLSKLAAHLKPRYHFAGL-GVHYERQPYRNHRVLLEPARHTTRFIGLAAIGN 224
Query: 236 KEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQY 295
EKQK+++A + P M +++ + PN + PY L + +KE R + + +
Sbjct: 225 PEKQKWLYACNVKPMRKMEKEELTAQPPNASEFPYRELLEEIAAKETLSRMNGNGQRPEG 284
Query: 296 WRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKG 355
+Y + G G+G K RH+ + G
Sbjct: 285 SQYRFEMGGAEDGAGNGRK-------------------RHNDGGND-------------G 312
Query: 356 KCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCA 415
K P L N D+++ HL+V++G Y A
Sbjct: 313 PRNKQPVGPCWFCLSNVDAEK--------------------------HLVVAIGNKCYAA 346
Query: 416 LPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKR 475
+PKGPL EDHV+V+ V H+ + +S E E+ +F+++ + QGK V FE + R
Sbjct: 347 MPKGPLTEDHVMVLSVGHIQSQVSAPVEVRDEIEKFKSAFTLMANKQGKALVTFER-NFR 405
Query: 476 GTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFF 535
H +Q V I S + A++ F AA GF+ + + SL + C +F
Sbjct: 406 TQHLQVQMVMIDKSSSKALKSSFTTAAACAGFELVTMGPDE------SLLDMVNEGCPYF 459
Query: 536 YVELPEG 542
ELP+G
Sbjct: 460 VAELPDG 466
|
Caenorhabditis elegans (taxid: 6239) |
| >sp|Q8CI33|C19L1_MOUSE CWF19-like protein 1 OS=Mus musculus GN=Cwf19l1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 156/557 (28%), Positives = 243/557 (43%), Gaps = 105/557 (18%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RV+++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDVLFNRVRTIQKKSGNFDLLLCVGNFFGSAQDA--EWEEYKTGNKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G A ++ +AN DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLG-----------ANNEETANYFQGADGCELAENITYLGRKGVFTGSSGLQIV 111
Query: 122 YLSGRQS-SEGQQFGTYSQDDVDALRAL---AEEPGIVDLFLTNEWPSGVTNKAAASDML 177
YLSG +S E ++S DV +LR + A + VD+ LT+ WP V + +S
Sbjct: 112 YLSGTESLDEPVPAHSFSPKDVSSLRTMLCSASQFKGVDILLTSPWPKYVGSFGNSS--- 168
Query: 178 VGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLA 231
G D+ N S +S L +KPRYH A + +Y R PY N A H TRF+ LA
Sbjct: 169 -GEVDTKNCGSALISSLAVSLKPRYHFAALEKSYYERLPYRNHVVLQESAQHATRFIALA 227
Query: 232 PVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVS 291
VGN EK+K+++A S P M+ A++ + P+ T +PY D G + P+
Sbjct: 228 NVGNPEKKKYLYAFSIVPMKLMAVAELVKQPPDVTENPYR--DSGKQAAGGKHIPAPQEE 285
Query: 292 DSQYWRYDVSQK--RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCL 349
+ + +D+S+K R++ G + C F
Sbjct: 286 SACQFFFDLSEKQGRKRPSTGRDTRPPHAKQPRKPPQPPGPCWF---------------- 329
Query: 350 DFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSV-ESH-LIVS 407
C PE KH + N C+ L+ + + H LI+
Sbjct: 330 -------CLASPEVE-KHLV---------------VNIGTHCYLALAKGGLSDDHVLILP 366
Query: 408 VGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAV 467
+G Y +VE E EK ++ +L ++K++GK V
Sbjct: 367 IGHYQSVVELSAEVVE-------------------EVEK----YKATLQRFFKSRGKRCV 403
Query: 468 FFEWLSKRGTHANLQAVPIPTSKAAA--VQDIFNLAAEKLGFKFLATKSSKSSDGRRSLR 525
FE + R H LQ +P+P S A ++D F A++ + L + SD ++ +
Sbjct: 404 LFE-RNYRSHHLQLQVIPVPLSCCATDDIKDAFITQAQEQQIELLEI--PEHSDIKQIAQ 460
Query: 526 AQFDRNCSFFYVELPEG 542
++FYVEL G
Sbjct: 461 P----GAAYFYVELDTG 473
|
Mus musculus (taxid: 10090) |
| >sp|Q5R8R4|C19L1_PONAB CWF19-like protein 1 OS=Pongo abelii GN=CWF19L1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 163/326 (50%), Gaps = 34/326 (10%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFF---PDSSELLDEFMNYVEG 59
P R+L CGDV G+ + LF RVQ++ K +G FD +LCVG FF PD+ E+ Y G
Sbjct: 5 PLRLLTCGDVEGKFDILFNRVQAIQKKSGNFDLLLCVGNFFGSTPDA-----EWEEYKTG 59
Query: 60 RSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGL 118
+ PI TY +G A ++ + DG ++ +N+ +L G FT GL
Sbjct: 60 TKKAPIQTYVLG-----------ANNQETVKYFQDADGCELAENITYLGRKGIFTGSSGL 108
Query: 119 SVAYLSGRQSSEGQQFG-TYSQDDVDALRAL---AEEPGIVDLFLTNEWPSGVTNKAAAS 174
+ YLSG +S G ++S DV +LR + + VD+ LT+ WP V N +S
Sbjct: 109 QIVYLSGTESLNEPVPGYSFSPKDVSSLRTMLCTTSQFKGVDILLTSPWPKYVGNFGNSS 168
Query: 175 DMLVGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFL 228
G D+ S VS L +KPRYH A + +Y R PY N +A H TRF+
Sbjct: 169 ----GEVDTKKCGSALVSSLATGLKPRYHFAALEKTYYERLPYRNHIVLQENAQHATRFI 224
Query: 229 GLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSD 288
LA VGN EK+K+++A S P M AA++ + P+ T +PY Q + + + P +
Sbjct: 225 ALANVGNPEKKKYLYAFSIVPMKLMDAAELVKQPPDVTENPYRKSGQEASTGKQILAPVE 284
Query: 289 SVSDSQYWRYDVSQKRQKHGGGDGDK 314
+ ++ + Q R++ G K
Sbjct: 285 ESACQFFFDLNEKQGRKRSSTGRDSK 310
|
Pongo abelii (taxid: 9601) |
| >sp|Q69YN2|C19L1_HUMAN CWF19-like protein 1 OS=Homo sapiens GN=CWF19L1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 157/555 (28%), Positives = 240/555 (43%), Gaps = 100/555 (18%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RVQ++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDILFNRVQAIQKKSGNFDLLLCVGNFFGSTQDA--EWEEYKTGIKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G A ++ + DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLG-----------ANNQETVKYFQDADGCELAENITYLGRKGIFTGSSGLQIV 111
Query: 122 YLSGRQSSEGQQFG-TYSQDDVDALRAL---AEEPGIVDLFLTNEWPSGVTNKAAASDML 177
YLSG +S G ++S DV +LR + + VD+ LT+ WP V N +S
Sbjct: 112 YLSGTESLNEPVPGYSFSPKDVSSLRMMLCTTSQFKGVDILLTSPWPKCVGNFGNSS--- 168
Query: 178 VGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLA 231
G D+ S VS L +KPRYH A + +Y R PY N +A H TRF+ LA
Sbjct: 169 -GEVDTKKCGSALVSSLATGLKPRYHFAALEKTYYERLPYRNHIILQENAQHATRFIALA 227
Query: 232 PVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVS 291
VGN EK+K+++A S P M AA++ + P+ T +PY Q + + P + +
Sbjct: 228 NVGNPEKKKYLYAFSIVPMKLMDAAELVKQPPDVTENPYRKSGQEASIGKQILAPVEESA 287
Query: 292 DSQYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDF 351
++ + Q R++ G K S P H R+ F
Sbjct: 288 CQFFFDLNEKQGRKRSSTGRDSK---------SSP--------HPKQPRKPPQPPGPCWF 330
Query: 352 IIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSV-ESH-LIVSVG 409
C PE KH + N C+ L+ + + H LI+ +G
Sbjct: 331 -----CLASPEVE-KHLV---------------VNIGTHCYLALAKGGLSDDHVLILPIG 369
Query: 410 EYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFF 469
Y +VE+ VE T L RF +K++GK V F
Sbjct: 370 HYQSVVELSAEVVEE------VEKYKAT----------LRRF-------FKSRGKWCVVF 406
Query: 470 EWLSKRGTHANLQAVPIPTSKAAA--VQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQ 527
E + + H LQ +P+P S + ++D F A++ + L + SD ++ +
Sbjct: 407 E-RNYKSHHLQLQVIPVPISCSTTDDIKDAFITQAQEQQIELLEI--PEHSDIKQIAQP- 462
Query: 528 FDRNCSFFYVELPEG 542
++FYVEL G
Sbjct: 463 ---GAAYFYVELDTG 474
|
Homo sapiens (taxid: 9606) |
| >sp|A1Z8J0|C19L1_DROME CWF19-like protein 1 homolog OS=Drosophila melanogaster GN=CG7741 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 161/330 (48%), Gaps = 52/330 (15%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIP 64
+IL+ GDV GR QLF+RV+ VNK AGPF+ + CVG FF + + +E + Y G I
Sbjct: 27 KILVVGDVRGRFKQLFQRVEQVNKKAGPFEILCCVGDFFGEDKQ-NEELIAYKNGFKHIT 85
Query: 65 IPTYFIGDYGVGAAKVLLAASKNSANQGFK--MDGFKVTDNLFWLKGSGNFTL-HGLSVA 121
+PTY +G ++ + F+ DG ++ NL +L G +TL G+ +A
Sbjct: 86 VPTYILG------------PNQREHEKYFENLTDG-EICTNLTYLGRRGVYTLSSGVKIA 132
Query: 122 YLSGRQS-----SEGQQFGTYSQDDVDALR-------ALAEEPGIVDLFLTNEWPSGVTN 169
YLSG ++ S G + +++ DV A+R + E VD+ LT++WP G+
Sbjct: 133 YLSGLEAQGTADSAGSEH-EFTKADVIAVRNSCLVSKNCSTEYRGVDVLLTSQWPFGMQE 191
Query: 170 KAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPY-----SNVDAVHV 224
K A+ VS L EIKPRYH G Y P+
Sbjct: 192 KENAT-----------ASKLVSFLCREIKPRYHFCAINGTHYESAPFRMPKDETTQFELC 240
Query: 225 TRFLGLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAK 284
TRF+ LA VGN EK K+I+ALS P D++ KT N P+ LD G A
Sbjct: 241 TRFISLAEVGNAEKAKYIYALSLKPVDKSRLLDLAQKTTNEIPCPFIGLDLG-----GAI 295
Query: 285 RPSDSVSDSQYWRYDVSQKRQKHGGGDGDK 314
+DS + QY+ YD+ R+K GGD +K
Sbjct: 296 GKNDSSENRQYF-YDMDGGRRKRQGGDNNK 324
|
Drosophila melanogaster (taxid: 7227) |
| >sp|Q10414|MU161_SCHPO CWF19-like protein mug161 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug161 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 132/550 (24%), Positives = 220/550 (40%), Gaps = 117/550 (21%)
Query: 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGR 60
+ P +L+ G GR+ + + + ++K G F +C+G F + + +
Sbjct: 7 LKPADVLVIGSADGRVIEAIEYIADLHKQHG-FKFAICLGNLFSHKRTTSADVVKLKNEK 65
Query: 61 SEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF-TLHGLS 119
++PIP YF GVG A + S M G +V NLF + G T + +
Sbjct: 66 VKVPIPVYF----GVGTAGL-----PESIISHMAMYGPEVAPNLFCMGICGFMKTFYKFT 116
Query: 120 VAYLSGRQSSEG-----QQF------GTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVT 168
+A L G + E ++F + + DV L D+ ++EWP V
Sbjct: 117 IAQLGGSYNEEKYYQPPEKFEQSLNEKCFHRSDVQKLSKRC------DILFSSEWPEDVQ 170
Query: 169 NKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHV---- 224
+ + + ++ L A P+Y V+Y REPY N A++V
Sbjct: 171 ENSTLPERKL-----PKGCMPLAALAANCMPQYFFVPGP-VYYEREPYKNSAAINVNTGT 224
Query: 225 -TRFLGLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAA 283
T F+ LAP N + +KF +A + P ++ + PN T SP+ H
Sbjct: 225 VTHFVALAPFKNSKNEKFSYAFTLYP---LTTEYMQPAPPNCTASPF------EHRPIPL 275
Query: 284 KRPS-DSVSDSQYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQ 342
KR S D + Q ++ S+ ++ N H +++
Sbjct: 276 KRASEDQIIPQQTNKFHKSKSSTA-------------LFKSKKDSSSSLNKMHKSES--- 319
Query: 343 CLRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASA---NRSK----ECWFCL 395
HS N+ H+SE+ ++ RSK C+FCL
Sbjct: 320 ------------------------HSALNN----LHKSESGTSLNNRRSKVGPGSCFFCL 351
Query: 396 SSPSVESHLIVSVGEYYYCALPKGPLVED-----------HVLVIPVEHVPNTISTSPEC 444
S+P+V HLIV++G Y ALPKGPL HVL+IP+ H + +ST +
Sbjct: 352 SNPNVALHLIVAIGNEAYMALPKGPLTTTASNTPALASSGHVLIIPIAHA-SALSTLSDT 410
Query: 445 E-----KELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQAVPIPTSKAAAVQDIFN 499
E+ RF+ ++ Y +A+ +E G H + Q +PIP + ++ +F
Sbjct: 411 SYEKTLNEMNRFRKAVTDMYNACDSDALVYEISRANGVHLHWQMIPIPKISSHRIESVFL 470
Query: 500 LAAEKLGFKF 509
A++ G+ F
Sbjct: 471 EMAKEAGYDF 480
|
Has a role in meiosis. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 550 | ||||||
| 255546111 | 606 | nucleic acid binding protein, putative [ | 0.983 | 0.892 | 0.741 | 0.0 | |
| 359484480 | 607 | PREDICTED: zinc finger CCCH domain-conta | 0.985 | 0.892 | 0.748 | 0.0 | |
| 449435870 | 606 | PREDICTED: zinc finger CCCH domain-conta | 0.983 | 0.892 | 0.734 | 0.0 | |
| 224112144 | 606 | predicted protein [Populus trichocarpa] | 0.970 | 0.881 | 0.731 | 0.0 | |
| 297738661 | 593 | unnamed protein product [Vitis vinifera] | 0.96 | 0.890 | 0.722 | 0.0 | |
| 356547875 | 601 | PREDICTED: zinc finger CCCH domain-conta | 0.976 | 0.893 | 0.716 | 0.0 | |
| 356564790 | 552 | PREDICTED: zinc finger CCCH domain-conta | 0.92 | 0.916 | 0.735 | 0.0 | |
| 145362692 | 596 | zinc finger CCCH domain-containing prote | 0.965 | 0.890 | 0.711 | 0.0 | |
| 297796575 | 603 | hypothetical protein ARALYDRAFT_495780 [ | 0.965 | 0.880 | 0.702 | 0.0 | |
| 8777430 | 593 | unnamed protein product [Arabidopsis tha | 0.96 | 0.890 | 0.701 | 0.0 |
| >gi|255546111|ref|XP_002514115.1| nucleic acid binding protein, putative [Ricinus communis] gi|223546571|gb|EEF48069.1| nucleic acid binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/545 (74%), Positives = 474/545 (86%), Gaps = 4/545 (0%)
Query: 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGR 60
M+PPRILLCGDVLGRLNQL+KRVQSVNKSAGPFDA+ CVGQFFP SSE L+EFM+Y++GR
Sbjct: 1 MAPPRILLCGDVLGRLNQLYKRVQSVNKSAGPFDALFCVGQFFPASSEQLEEFMDYIDGR 60
Query: 61 SEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSV 120
S IP+PTYFIGDYGV A KVL AASKN A GFKMDGF+++DNLFWLKGSG F LHGLS+
Sbjct: 61 SHIPLPTYFIGDYGVAAPKVLSAASKNHAKLGFKMDGFEISDNLFWLKGSGKFILHGLSI 120
Query: 121 AYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGI 180
AYLSGRQS++GQQ+GTYSQDD DALRA+AEEPG+VDLFLTNEWPSGVTN+A+ SD+ GI
Sbjct: 121 AYLSGRQSADGQQYGTYSQDDADALRAMAEEPGVVDLFLTNEWPSGVTNRASISDIPTGI 180
Query: 181 SDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQK 240
SDS +DSTVSELVAEIKPRYHIAG+KGVF+AREPYSN DAVHVTRFLGLA VGNK+KQK
Sbjct: 181 SDSVGSDSTVSELVAEIKPRYHIAGTKGVFFAREPYSNSDAVHVTRFLGLASVGNKDKQK 240
Query: 241 FIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDV 300
FIHA+SPTP +TM++A+ISMK NTTLSPYTF++Q + KE KRPSDS+SDSQYWRYDV
Sbjct: 241 FIHAISPTPGSTMTSAEISMKPSNTTLSPYTFIEQAAAPKEGTKRPSDSMSDSQYWRYDV 300
Query: 301 SQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKG 360
SQKR + G DGDK+CFKF++SGSCPR EKC+F HD DAREQ RGVC+DF++KGKCE+G
Sbjct: 301 SQKRHR-TGADGDKLCFKFVFSGSCPREEKCHFLHDMDAREQYSRGVCIDFLVKGKCERG 359
Query: 361 PECSYKHSLQNDDSQRTHRS---ENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALP 417
P+C++KH+L ++ +HR ENA+ NRSKECWFCLSSP VESHLI+S+GE YYCAL
Sbjct: 360 PDCNFKHNLLSEGESYSHRRRGFENANTNRSKECWFCLSSPGVESHLIISIGENYYCALA 419
Query: 418 KGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGT 477
KGPLV+DH+L++P+EH PNT+S ECE EL R + SL +YY QGKE + FEW SKRGT
Sbjct: 420 KGPLVQDHILLVPIEHSPNTLSLPQECESELVRLRKSLKLYYNKQGKETILFEWASKRGT 479
Query: 478 HANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYV 537
HANLQAVP+P+S+AAAVQDIFN+AAEKLGFKF+ K + +SDGR+ LR QFDRN SFFYV
Sbjct: 480 HANLQAVPVPSSRAAAVQDIFNMAAEKLGFKFVTMKFNNNSDGRKWLRTQFDRNYSFFYV 539
Query: 538 ELPEG 542
ELP+G
Sbjct: 540 ELPDG 544
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359484480|ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/545 (74%), Positives = 472/545 (86%), Gaps = 3/545 (0%)
Query: 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGR 60
M+PPRILLCGDVLGRLNQL KR+ SVNKSAGPFDAVLCVGQFFPDS E L EFM+Y+EGR
Sbjct: 1 MAPPRILLCGDVLGRLNQLVKRILSVNKSAGPFDAVLCVGQFFPDSPERLLEFMDYIEGR 60
Query: 61 SEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSV 120
S+IP+PTYFIGDYG+GAAKVL AASK+SAN GFKMDG ++ DNL+WLKGSG FTLHGLSV
Sbjct: 61 SQIPLPTYFIGDYGIGAAKVLSAASKDSANLGFKMDGLRICDNLYWLKGSGKFTLHGLSV 120
Query: 121 AYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGI 180
Y+SGR+S +GQQFG YSQDDVDALRALA+E GIVDLFLTNEWPSGVT A S++ GI
Sbjct: 121 VYISGRRSLDGQQFGKYSQDDVDALRALADESGIVDLFLTNEWPSGVTKGAVTSNIPPGI 180
Query: 181 SDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQK 240
SDSS DS +SELV EIKPRYHIAG+KG+FY REPYSN+DAVHVTRFLGLAPVGNK+KQK
Sbjct: 181 SDSSGCDSAISELVGEIKPRYHIAGTKGIFYDREPYSNLDAVHVTRFLGLAPVGNKDKQK 240
Query: 241 FIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDV 300
FIHA+SP PA+TMS+A+ISMK PNTTL PY +++ + + +A KRPSDS+SD+QYWRYDV
Sbjct: 241 FIHAISPIPASTMSSAEISMKPPNTTLFPYKIIEETAPTNQATKRPSDSISDTQYWRYDV 300
Query: 301 SQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKG 360
SQKRQKHG GDGDK+CFKF+ SGSCPRG KCNF HDT+AREQ +RGVC DFI KGKCE+G
Sbjct: 301 SQKRQKHGAGDGDKLCFKFVSSGSCPRGNKCNFLHDTEAREQYMRGVCFDFINKGKCERG 360
Query: 361 PECSYKHSLQNDD---SQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALP 417
P+C++KHSLQ++D + R SENA ++RSK CWFCLSSP VESHLI+S+GE YYCAL
Sbjct: 361 PDCNFKHSLQDEDEGFASRRSGSENAKSSRSKRCWFCLSSPDVESHLIISIGESYYCALA 420
Query: 418 KGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGT 477
KGPLVED VLVIPVEH NT+S PECE EL RFQ SL MY++ QGKE VFFEW+ KRGT
Sbjct: 421 KGPLVEDQVLVIPVEHSANTLSLPPECEIELDRFQKSLKMYFRTQGKEVVFFEWIFKRGT 480
Query: 478 HANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYV 537
HAN+QAVPIP S+A+AV++IF LAAEKLGF+F+ TKS+ S+GR+SLRAQFD SFFYV
Sbjct: 481 HANIQAVPIPLSRASAVKNIFILAAEKLGFQFVTTKSNNDSEGRKSLRAQFDDKISFFYV 540
Query: 538 ELPEG 542
ELP+G
Sbjct: 541 ELPDG 545
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449435870|ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Cucumis sativus] gi|449489882|ref|XP_004158448.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/543 (73%), Positives = 462/543 (85%), Gaps = 2/543 (0%)
Query: 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGR 60
MSPPRILLCGDV GRLNQL+KRV SVNKSAGPFD +LCVGQFFPDS++ LDEFM+YVEGR
Sbjct: 1 MSPPRILLCGDVFGRLNQLYKRVVSVNKSAGPFDVLLCVGQFFPDSTDQLDEFMDYVEGR 60
Query: 61 SEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSV 120
S IP+ TYFIGDYGVGAAKVLLA+SK+SANQGFKMDG K+ NL WLKGSG FTLHGLSV
Sbjct: 61 SVIPLSTYFIGDYGVGAAKVLLASSKDSANQGFKMDGLKICANLHWLKGSGKFTLHGLSV 120
Query: 121 AYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGI 180
AYLSGR SS+G FGTY+QDDVDALRA+AEEPG+VDLFL+NEWP+ VTN+ SD+ G+
Sbjct: 121 AYLSGRCSSDGLPFGTYTQDDVDALRAIAEEPGVVDLFLSNEWPTEVTNRVPTSDIPPGV 180
Query: 181 SDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQK 240
SD S +D+T+SELV EIKPRYHIAG+KGVF+AREPYSNVDAVHVTRFLGLA VGNKEKQK
Sbjct: 181 SDLSGSDATISELVVEIKPRYHIAGTKGVFFAREPYSNVDAVHVTRFLGLASVGNKEKQK 240
Query: 241 FIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDV 300
FIHA+SP P++TMSA +ISMK PNTTLSPYT ++ S + ++AKR S+SVS+SQYWRY+V
Sbjct: 241 FIHAISPIPSSTMSAVEISMKPPNTTLSPYTLTERKSEASDSAKRSSNSVSESQYWRYEV 300
Query: 301 SQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKG 360
SQKRQK+G D +K+CFKF SGSCPRGEKCNF HD DAREQ RGVC DF+ KGKCE+G
Sbjct: 301 SQKRQKYGTSDTNKLCFKFTSSGSCPRGEKCNFHHDMDAREQSQRGVCFDFLNKGKCERG 360
Query: 361 PECSYKHSLQN--DDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPK 418
P+C++KHS QN D RS NA NRSKECWFCLSSP++ESHLIVSVGE +YCAL K
Sbjct: 361 PDCNFKHSFQNEFDSHSGKRRSGNAGTNRSKECWFCLSSPNIESHLIVSVGESFYCALAK 420
Query: 419 GPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTH 478
GPLV DH+LVIPVEH PNT+S P+ E E+ R QN L Y+K+QGKE VFFEW+SKR TH
Sbjct: 421 GPLVPDHILVIPVEHFPNTLSLGPDYETEINRLQNCLRKYFKSQGKEVVFFEWVSKRSTH 480
Query: 479 ANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVE 538
ANLQAVPIP+S+A VQ+IF++AAEKLGFKF+ +KS S+GR+SLR QFD + SFFY E
Sbjct: 481 ANLQAVPIPSSRAHVVQNIFDMAAEKLGFKFVISKSDAPSEGRKSLRTQFDSDHSFFYAE 540
Query: 539 LPE 541
LPE
Sbjct: 541 LPE 543
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224112144|ref|XP_002332828.1| predicted protein [Populus trichocarpa] gi|222833259|gb|EEE71736.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/552 (73%), Positives = 465/552 (84%), Gaps = 18/552 (3%)
Query: 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEG- 59
MS PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDA+ CVGQFFPDS+E L+EF +Y+EG
Sbjct: 1 MSTPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDALFCVGQFFPDSAEQLEEFTDYIEGG 60
Query: 60 --RSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHG 117
RS+IP+PTYFIGDYGV A KVL AS+NSAN GFKMDGFK+ DNLFWL+GSG FTLHG
Sbjct: 61 GGRSQIPLPTYFIGDYGVAAPKVLSTASRNSANLGFKMDGFKICDNLFWLRGSGKFTLHG 120
Query: 118 LSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDML 177
LSV YLSGRQSS GQ FGTYSQDDVDALRALAEEPG+VD GVTN+A+ASD+
Sbjct: 121 LSVVYLSGRQSSNGQHFGTYSQDDVDALRALAEEPGVVDF--------GVTNRASASDIP 172
Query: 178 VGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKE 237
G D++ +DS+VSELVAEIKPRYH AG+KGVFYAREPYSNVDAVHVTRF GLA VGNK+
Sbjct: 173 AGFLDTTGSDSSVSELVAEIKPRYHFAGTKGVFYAREPYSNVDAVHVTRFFGLAMVGNKD 232
Query: 238 KQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWR 297
KQKFIHA+SPTPA+TMSAA+ISMK PNTTLSPYT + + +E KR + SVSDSQYWR
Sbjct: 233 KQKFIHAISPTPASTMSAAEISMKPPNTTLSPYTLVVDKTALEEVTKRSTASVSDSQYWR 292
Query: 298 YDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKC 357
YDVS KR K G G+G+K+CFKFIYSGSCPRGEKCNF+HD DAREQ L GVCLDF+IKGKC
Sbjct: 293 YDVSHKRHKSGSGEGNKLCFKFIYSGSCPRGEKCNFQHDMDAREQYLGGVCLDFLIKGKC 352
Query: 358 EKGPECSYKHSLQND---DSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYC 414
E+GP+C++KH+LQN+ S+R SEN + NRSKECWFCLSSP+VESHLI+S+GE+YYC
Sbjct: 353 ERGPDCNFKHNLQNEGESHSRRRRGSENDNGNRSKECWFCLSSPNVESHLIISIGEFYYC 412
Query: 415 ALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSK 474
ALPKGPLV+DHVLVIP+EH P T+S + + EL +FQNSL +YYKN+GKEA+ FEW+SK
Sbjct: 413 ALPKGPLVQDHVLVIPIEHAPCTLSLTQQSNSELVKFQNSLKLYYKNRGKEAILFEWISK 472
Query: 475 RGTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATK----SSKSSDGRRSLRAQFDR 530
R +HAN+Q VP+P++KAAAVQDI NLAAEKLGFKF+ K + SSDGR LR QFDR
Sbjct: 473 RSSHANIQVVPVPSTKAAAVQDICNLAAEKLGFKFVVMKFILAVNNSSDGREWLRTQFDR 532
Query: 531 NCSFFYVELPEG 542
N SFFYVEL EG
Sbjct: 533 NYSFFYVELTEG 544
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297738661|emb|CBI27906.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/545 (72%), Positives = 459/545 (84%), Gaps = 17/545 (3%)
Query: 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGR 60
M+PPRILLCGDVLGRLNQL KR+ SVNKSAGPFDAVLCVGQFFPDS E L EFM+Y+EGR
Sbjct: 1 MAPPRILLCGDVLGRLNQLVKRILSVNKSAGPFDAVLCVGQFFPDSPERLLEFMDYIEGR 60
Query: 61 SEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSV 120
S+IP+PTYFIGDYG+GAAKVL AASK+SAN GFKMDG ++ DNL+WLKGSG FTLHGLSV
Sbjct: 61 SQIPLPTYFIGDYGIGAAKVLSAASKDSANLGFKMDGLRICDNLYWLKGSGKFTLHGLSV 120
Query: 121 AYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGI 180
Y+SGR+S +GQQFG YSQDDVDALRALA++ GVT A S++ GI
Sbjct: 121 VYISGRRSLDGQQFGKYSQDDVDALRALADD--------------GVTKGAVTSNIPPGI 166
Query: 181 SDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQK 240
SDSS DS +SELV EIKPRYHIAG+KG+FY REPYSN+DAVHVTRFLGLAPVGNK+KQK
Sbjct: 167 SDSSGCDSAISELVGEIKPRYHIAGTKGIFYDREPYSNLDAVHVTRFLGLAPVGNKDKQK 226
Query: 241 FIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDV 300
FIHA+SP PA+TMS+A+ISMK PNTTL PY +++ + + +A KRPSDS+SD+QYWRYDV
Sbjct: 227 FIHAISPIPASTMSSAEISMKPPNTTLFPYKIIEETAPTNQATKRPSDSISDTQYWRYDV 286
Query: 301 SQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKG 360
SQKRQKHG GDGDK+CFKF+ SGSCPRG KCNF HDT+AREQ +RGVC DFI KGKCE+G
Sbjct: 287 SQKRQKHGAGDGDKLCFKFVSSGSCPRGNKCNFLHDTEAREQYMRGVCFDFINKGKCERG 346
Query: 361 PECSYKHSLQNDD---SQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALP 417
P+C++KHSLQ++D + R SENA ++RSK CWFCLSSP VESHLI+S+GE YYCAL
Sbjct: 347 PDCNFKHSLQDEDEGFASRRSGSENAKSSRSKRCWFCLSSPDVESHLIISIGESYYCALA 406
Query: 418 KGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGT 477
KGPLVED VLVIPVEH NT+S PECE EL RFQ SL MY++ QGKE VFFEW+ KRGT
Sbjct: 407 KGPLVEDQVLVIPVEHSANTLSLPPECEIELDRFQKSLKMYFRTQGKEVVFFEWIFKRGT 466
Query: 478 HANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYV 537
HAN+QAVPIP S+A+AV++IF LAAEKLGF+F+ TKS+ S+GR+SLRAQFD SFFYV
Sbjct: 467 HANIQAVPIPLSRASAVKNIFILAAEKLGFQFVTTKSNNDSEGRKSLRAQFDDKISFFYV 526
Query: 538 ELPEG 542
ELP+G
Sbjct: 527 ELPDG 531
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356547875|ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/539 (71%), Positives = 457/539 (84%), Gaps = 2/539 (0%)
Query: 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
PRILLCGDVLGRLNQLFKRV SVNKSAGPFDA+LCVGQFFPDS E L++F Y+EG S
Sbjct: 3 PRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQLEDFTKYIEGGSHF 62
Query: 64 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL 123
P+PTYF+GDYGV A K+LL ASK+SANQGFKMDGFKV NL+WLKGSG F+L GLSVAYL
Sbjct: 63 PLPTYFVGDYGVAAPKLLLQASKDSANQGFKMDGFKVCHNLYWLKGSGKFSLFGLSVAYL 122
Query: 124 SGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDS 183
SGR+SS QQFGTY++DDVDALRA+AEEPGIVDLFLTNEWPSGVTN+AA SD+ G+SD+
Sbjct: 123 SGRKSSSAQQFGTYTEDDVDALRAIAEEPGIVDLFLTNEWPSGVTNRAADSDIPAGLSDA 182
Query: 184 SNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIH 243
+ DSTVSELV EIKPRYHIAG+KG++YAREPYSNVDAVHVTRF+GLA VGNK+KQKFIH
Sbjct: 183 AGGDSTVSELVQEIKPRYHIAGTKGIYYAREPYSNVDAVHVTRFIGLASVGNKDKQKFIH 242
Query: 244 ALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQK 303
A+SPTPA+TMS+ +I+MKT NTTLSPYT+ ++ + ++ KR SDS+SD QYWRYDVSQK
Sbjct: 243 AISPTPASTMSSTEIAMKTTNTTLSPYTYEEKRTSPMDSTKRSSDSISDPQYWRYDVSQK 302
Query: 304 RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPEC 363
RQKH G GDK+CFKF+ SGSCPRGEKCNFRHDTDAREQC+RGVC DF+ KGKCE+GP+C
Sbjct: 303 RQKHEAGHGDKLCFKFVSSGSCPRGEKCNFRHDTDAREQCMRGVCFDFLNKGKCERGPDC 362
Query: 364 SYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVE 423
++KHSLQ++ + R + RSKECWFCLSSP+VESHLI+S+GE YY AL KGPLVE
Sbjct: 363 NFKHSLQDEGGRLPSR--RPGSGRSKECWFCLSSPNVESHLIISIGENYYLALAKGPLVE 420
Query: 424 DHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQA 483
DHVL+IPVEH+P+T+S S E E EL RFQNSL Y K+Q KE +FFEW+S RGTHAN+QA
Sbjct: 421 DHVLIIPVEHMPSTLSMSSESEIELSRFQNSLKSYCKSQEKEVIFFEWVSVRGTHANIQA 480
Query: 484 VPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEG 542
+PIP+SKA + IFNLAA+KLGF+F+ K S+GR+ L+AQ D + S FY ++P G
Sbjct: 481 IPIPSSKAIMAEKIFNLAAQKLGFEFVTKKFDSISEGRKFLKAQIDGDSSLFYAQIPGG 539
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564790|ref|XP_003550631.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/510 (73%), Positives = 441/510 (86%), Gaps = 4/510 (0%)
Query: 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
PRILLCGDVLGRLNQLFKRV SVNKSAGPFDA+LCVGQFFPDS E L++F Y+EG S
Sbjct: 3 PRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQLEDFTKYIEGGSHF 62
Query: 64 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL 123
P+PTYFIGDYGV A K+LL ASK+SANQGFKMDGFKV NL+WLKGSG F L GLSVAYL
Sbjct: 63 PLPTYFIGDYGVAAPKLLLQASKDSANQGFKMDGFKVCHNLYWLKGSGKFPLFGLSVAYL 122
Query: 124 SGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDS 183
SGR+SS GQQFG Y++DDVDALRA+AEEPG+VDLFLTNEWP+GVTN+AA SD+ G+SD
Sbjct: 123 SGRKSSSGQQFGNYTEDDVDALRAIAEEPGVVDLFLTNEWPNGVTNRAADSDIPAGLSDG 182
Query: 184 SNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIH 243
S DSTVSELV EIKPRYHIAG+KG++YAREPYSNVDAVHVTRF+GLA VGN++KQKFIH
Sbjct: 183 S--DSTVSELVQEIKPRYHIAGTKGIYYAREPYSNVDAVHVTRFIGLASVGNRDKQKFIH 240
Query: 244 ALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQK 303
A+SPTPA+TMS+ +I+MKT NTTLSPYTF ++ + ++AKR SDS+SD QYWRYDV+QK
Sbjct: 241 AISPTPASTMSSTEIAMKTTNTTLSPYTFKEKRTSPMDSAKRSSDSISDPQYWRYDVAQK 300
Query: 304 RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPEC 363
RQKH G GDK+CFKF+ SGSCPRGEKCNF+HDTDAREQC+RGVC DF+ KGKCE+GP+C
Sbjct: 301 RQKHEAGHGDKLCFKFVSSGSCPRGEKCNFQHDTDAREQCMRGVCFDFLNKGKCERGPDC 360
Query: 364 SYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVE 423
++KHSLQ++ ++ R + RSKECWFCLSSP+VESHLI+S+GE YY AL KGPLVE
Sbjct: 361 NFKHSLQDEGNRLPSR--RPGSGRSKECWFCLSSPNVESHLIISIGENYYLALAKGPLVE 418
Query: 424 DHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQA 483
DHVL+IPVEH+P+T+S PE E EL RFQNSL Y K+Q KE +FFEW+S RGTHANLQA
Sbjct: 419 DHVLIIPVEHMPSTLSMPPESEIELSRFQNSLRSYCKSQEKEFIFFEWVSIRGTHANLQA 478
Query: 484 VPIPTSKAAAVQDIFNLAAEKLGFKFLATK 513
+PIP+SKA V+ +FNLAA+KLGF+F+A K
Sbjct: 479 IPIPSSKAIMVEKVFNLAAQKLGFEFVAKK 508
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|145362692|ref|NP_974945.2| zinc finger CCCH domain-containing protein 64 [Arabidopsis thaliana] gi|75243460|sp|Q84WU9.1|C3H64_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 64; Short=AtC3H64 gi|27754231|gb|AAO22569.1| unknown protein [Arabidopsis thaliana] gi|332009438|gb|AED96821.1| zinc finger CCCH domain-containing protein 64 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/540 (71%), Positives = 447/540 (82%), Gaps = 9/540 (1%)
Query: 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
PRILLCGD LGRLNQLFKRVQSV+KSAGPFDA++CVGQFFPDS E+LDEF++YVEGR+++
Sbjct: 3 PRILLCGDPLGRLNQLFKRVQSVSKSAGPFDALICVGQFFPDSPEILDEFLDYVEGRAQV 62
Query: 64 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL 123
PIPTYF GDYGV A K+L SK + NQGFKMDG +V NLFWL+GSG F+LHGLSVAYL
Sbjct: 63 PIPTYFTGDYGVVAPKILSTTSKKAENQGFKMDGLEVCHNLFWLRGSGKFSLHGLSVAYL 122
Query: 124 SGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDS 183
SGRQSSE Q FG YSQDDVDALRALAEEPG VDLFLTNEWP+GVTN+AA SD+ VGISDS
Sbjct: 123 SGRQSSESQ-FGKYSQDDVDALRALAEEPGGVDLFLTNEWPAGVTNRAAVSDIPVGISDS 181
Query: 184 SNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIH 243
S +DSTVSELV E+KPRYHIAGS GVFYAREPY N ++ HVTRF+GLA VGNK KQKF+H
Sbjct: 182 SCSDSTVSELVMEVKPRYHIAGSMGVFYAREPYLNAESTHVTRFIGLAQVGNKNKQKFLH 241
Query: 244 ALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQK 303
ALSPTP +TMS A++S K P TTL PY D + SK KRP+DS SDSQYWRYDV K
Sbjct: 242 ALSPTPTSTMSPAELSAKPPKTTLWPYNLQDGAAESK---KRPNDSDSDSQYWRYDVP-K 297
Query: 304 RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPEC 363
RQK G G+K+CFKF+ SGSCPRGE C+F+H+ +AREQC RGVCLD IIKGKCEKGPEC
Sbjct: 298 RQK-SGSQGEKLCFKFVCSGSCPRGEDCHFQHNAEAREQCRRGVCLDLIIKGKCEKGPEC 356
Query: 364 SYKHSLQNDDS-QRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLV 422
SYKH Q++ S QR RSEN ANRSKECWFCLSSPSVESHLIVSVGE +YCALPKG LV
Sbjct: 357 SYKHEFQDESSIQRKPRSEN--ANRSKECWFCLSSPSVESHLIVSVGESFYCALPKGSLV 414
Query: 423 EDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQ 482
EDH+L+IP+EH+PNT+ SPE E EL R+QN L YK+QG +AVFFE +SKR +HANLQ
Sbjct: 415 EDHILIIPIEHLPNTLVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELVSKRVSHANLQ 474
Query: 483 AVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEG 542
VP+P+S+A + +IF+LAAEKLGFK + K + S+DGR+ L+ +++ FYVELP+G
Sbjct: 475 VVPVPSSRARLLPNIFSLAAEKLGFKLVTKKFNDSTDGRKYLQKEYNAALGLFYVELPDG 534
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297796575|ref|XP_002866172.1| hypothetical protein ARALYDRAFT_495780 [Arabidopsis lyrata subsp. lyrata] gi|297312007|gb|EFH42431.1| hypothetical protein ARALYDRAFT_495780 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/547 (70%), Positives = 449/547 (82%), Gaps = 16/547 (2%)
Query: 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
PRILLCGD LGRLNQLFKRVQSV+KSAGPFDA++CVGQFFPD+ ELLDEF++YVEGR+++
Sbjct: 3 PRILLCGDPLGRLNQLFKRVQSVSKSAGPFDALICVGQFFPDTPELLDEFLDYVEGRTQV 62
Query: 64 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL 123
PIPTYF GDYGV A K+L SK + NQGFKMDG +V NLFWL+GSG FTLHGLSVAYL
Sbjct: 63 PIPTYFTGDYGVVAPKILSMTSKKAENQGFKMDGLEVCHNLFWLRGSGKFTLHGLSVAYL 122
Query: 124 SGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLT-------NEWPSGVTNKAAASDM 176
SGRQSS+ Q FG YSQDDVDALRALAEE G+VDLFLT NEWP+GVTN+AA SD+
Sbjct: 123 SGRQSSDSQ-FGKYSQDDVDALRALAEESGVVDLFLTYPFFLYTNEWPAGVTNRAAVSDI 181
Query: 177 LVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNK 236
VG+SDSS +DSTVSELV E+KPRYHIAGS GVFYAREPY N ++ HVTRF+GLA VGNK
Sbjct: 182 PVGVSDSSCSDSTVSELVMEVKPRYHIAGSMGVFYAREPYLNAESTHVTRFIGLAQVGNK 241
Query: 237 EKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYW 296
KQKF+HALSPTP +TMS A++S K P TTL PY + + SK KRP+DS SDSQYW
Sbjct: 242 NKQKFLHALSPTPTSTMSPAELSAKPPKTTLWPYNLQESAAESK---KRPNDSESDSQYW 298
Query: 297 RYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGK 356
RYDVS KRQK+G G+K+CFKF+ SGSCPRGE C+F+H+ +AREQC RGVCLD IIKGK
Sbjct: 299 RYDVS-KRQKNGS-QGEKLCFKFVCSGSCPRGEDCHFQHNAEAREQCRRGVCLDLIIKGK 356
Query: 357 CEKGPECSYKHSLQNDDS-QRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCA 415
CEKGPECSYKH Q++ S QR RSENA NRSKECWFCLSSPSVESHLIVSVGE +YCA
Sbjct: 357 CEKGPECSYKHEFQDESSIQRKPRSENA--NRSKECWFCLSSPSVESHLIVSVGESFYCA 414
Query: 416 LPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKR 475
LPKG LVEDH+L+IP+EH+PNT+ SPE E EL R+QN L YK+QG +AVFFE +SKR
Sbjct: 415 LPKGSLVEDHILIIPIEHLPNTLVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELVSKR 474
Query: 476 GTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFF 535
+HANLQ VP+P+S+A + +IF+LAAEKLGFK + K S SSDGR+ L+ +++ F
Sbjct: 475 VSHANLQVVPVPSSRARLLPNIFSLAAEKLGFKLVTKKFSDSSDGRKYLQKEYNAALGLF 534
Query: 536 YVELPEG 542
YVELP+G
Sbjct: 535 YVELPDG 541
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|8777430|dbj|BAA97020.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/540 (70%), Positives = 443/540 (82%), Gaps = 12/540 (2%)
Query: 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
PRILLCGD LGRLNQLFKRVQSV+KSAGPFDA++CVGQFFPDS E+LDEF++YVEGR+++
Sbjct: 3 PRILLCGDPLGRLNQLFKRVQSVSKSAGPFDALICVGQFFPDSPEILDEFLDYVEGRAQV 62
Query: 64 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL 123
PIPTYF GDYGV A K+L SK + NQGFKMDG +V NLFWL+GSG F+LHGLSVAYL
Sbjct: 63 PIPTYFTGDYGVVAPKILSTTSKKAENQGFKMDGLEVCHNLFWLRGSGKFSLHGLSVAYL 122
Query: 124 SGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDS 183
SGRQSSE Q FG YSQDDVDALRALAEEPG +TNEWP+GVTN+AA SD+ VGISDS
Sbjct: 123 SGRQSSESQ-FGKYSQDDVDALRALAEEPGGC---ITNEWPAGVTNRAAVSDIPVGISDS 178
Query: 184 SNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIH 243
S +DSTVSELV E+KPRYHIAGS GVFYAREPY N ++ HVTRF+GLA VGNK KQKF+H
Sbjct: 179 SCSDSTVSELVMEVKPRYHIAGSMGVFYAREPYLNAESTHVTRFIGLAQVGNKNKQKFLH 238
Query: 244 ALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQK 303
ALSPTP +TMS A++S K P TTL PY D + SK KRP+DS SDSQYWRYDV K
Sbjct: 239 ALSPTPTSTMSPAELSAKPPKTTLWPYNLQDGAAESK---KRPNDSDSDSQYWRYDVP-K 294
Query: 304 RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPEC 363
RQK G G+K+CFKF+ SGSCPRGE C+F+H+ +AREQC RGVCLD IIKGKCEKGPEC
Sbjct: 295 RQK-SGSQGEKLCFKFVCSGSCPRGEDCHFQHNAEAREQCRRGVCLDLIIKGKCEKGPEC 353
Query: 364 SYKHSLQNDDS-QRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLV 422
SYKH Q++ S QR RSENA NRSKECWFCLSSPSVESHLIVSVGE +YCALPKG LV
Sbjct: 354 SYKHEFQDESSIQRKPRSENA--NRSKECWFCLSSPSVESHLIVSVGESFYCALPKGSLV 411
Query: 423 EDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQ 482
EDH+L+IP+EH+PNT+ SPE E EL R+QN L YK+QG +AVFFE +SKR +HANLQ
Sbjct: 412 EDHILIIPIEHLPNTLVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELVSKRVSHANLQ 471
Query: 483 AVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEG 542
VP+P+S+A + +IF+LAAEKLGFK + K + S+DGR+ L+ +++ FYVELP+G
Sbjct: 472 VVPVPSSRARLLPNIFSLAAEKLGFKLVTKKFNDSTDGRKYLQKEYNAALGLFYVELPDG 531
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 550 | ||||||
| TAIR|locus:2164630 | 596 | AT5G56900 [Arabidopsis thalian | 0.965 | 0.890 | 0.711 | 1.9e-209 | |
| ZFIN|ZDB-GENE-031204-5 | 544 | cwf19l1 "CWF19-like 1, cell cy | 0.534 | 0.540 | 0.329 | 9.8e-66 | |
| MGI|MGI:1919752 | 537 | Cwf19l1 "CWF19-like 1, cell cy | 0.514 | 0.527 | 0.341 | 1.1e-64 | |
| UNIPROTKB|F1S8V2 | 540 | CWF19L1 "Uncharacterized prote | 0.529 | 0.538 | 0.333 | 9.9e-64 | |
| UNIPROTKB|E1BG07 | 539 | CWF19L1 "Uncharacterized prote | 0.529 | 0.539 | 0.330 | 1.6e-63 | |
| RGD|1304716 | 537 | Cwf19l1 "CWF19-like 1, cell cy | 0.529 | 0.541 | 0.330 | 5.4e-63 | |
| UNIPROTKB|Q69YN2 | 538 | CWF19L1 "CWF19-like protein 1" | 0.527 | 0.539 | 0.341 | 7.8e-62 | |
| UNIPROTKB|E2RJE9 | 537 | CWF19L1 "Uncharacterized prote | 0.527 | 0.540 | 0.332 | 1.2e-61 | |
| UNIPROTKB|F1NLI3 | 483 | F1NLI3 "Uncharacterized protei | 0.52 | 0.592 | 0.333 | 3.3e-61 | |
| UNIPROTKB|E1C959 | 548 | E1C959 "Uncharacterized protei | 0.467 | 0.468 | 0.358 | 1.4e-60 |
| TAIR|locus:2164630 AT5G56900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2025 (717.9 bits), Expect = 1.9e-209, P = 1.9e-209
Identities = 384/540 (71%), Positives = 447/540 (82%)
Query: 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
PRILLCGD LGRLNQLFKRVQSV+KSAGPFDA++CVGQFFPDS E+LDEF++YVEGR+++
Sbjct: 3 PRILLCGDPLGRLNQLFKRVQSVSKSAGPFDALICVGQFFPDSPEILDEFLDYVEGRAQV 62
Query: 64 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL 123
PIPTYF GDYGV A K+L SK + NQGFKMDG +V NLFWL+GSG F+LHGLSVAYL
Sbjct: 63 PIPTYFTGDYGVVAPKILSTTSKKAENQGFKMDGLEVCHNLFWLRGSGKFSLHGLSVAYL 122
Query: 124 SGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDS 183
SGRQSSE Q FG YSQDDVDALRALAEEPG VDLFLTNEWP+GVTN+AA SD+ VGISDS
Sbjct: 123 SGRQSSESQ-FGKYSQDDVDALRALAEEPGGVDLFLTNEWPAGVTNRAAVSDIPVGISDS 181
Query: 184 SNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIH 243
S +DSTVSELV E+KPRYHIAGS GVFYAREPY N ++ HVTRF+GLA VGNK KQKF+H
Sbjct: 182 SCSDSTVSELVMEVKPRYHIAGSMGVFYAREPYLNAESTHVTRFIGLAQVGNKNKQKFLH 241
Query: 244 ALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQK 303
ALSPTP +TMS A++S K P TTL PY D + SK KRP+DS SDSQYWRYDV K
Sbjct: 242 ALSPTPTSTMSPAELSAKPPKTTLWPYNLQDGAAESK---KRPNDSDSDSQYWRYDVP-K 297
Query: 304 RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPEC 363
RQK G G+K+CFKF+ SGSCPRGE C+F+H+ +AREQC RGVCLD IIKGKCEKGPEC
Sbjct: 298 RQK-SGSQGEKLCFKFVCSGSCPRGEDCHFQHNAEAREQCRRGVCLDLIIKGKCEKGPEC 356
Query: 364 SYKHSLQNDDS-QRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLV 422
SYKH Q++ S QR RSENA NRSKECWFCLSSPSVESHLIVSVGE +YCALPKG LV
Sbjct: 357 SYKHEFQDESSIQRKPRSENA--NRSKECWFCLSSPSVESHLIVSVGESFYCALPKGSLV 414
Query: 423 EDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQ 482
EDH+L+IP+EH+PNT+ SPE E EL R+QN L YK+QG +AVFFE +SKR +HANLQ
Sbjct: 415 EDHILIIPIEHLPNTLVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELVSKRVSHANLQ 474
Query: 483 AVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEG 542
VP+P+S+A + +IF+LAAEKLGFK + K + S+DGR+ L+ +++ FYVELP+G
Sbjct: 475 VVPVPSSRARLLPNIFSLAAEKLGFKLVTKKFNDSTDGRKYLQKEYNAALGLFYVELPDG 534
|
|
| ZFIN|ZDB-GENE-031204-5 cwf19l1 "CWF19-like 1, cell cycle control" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 413 (150.4 bits), Expect = 9.8e-66, Sum P(2) = 9.8e-66
Identities = 109/331 (32%), Positives = 170/331 (51%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV GR+N LF RV ++ K +G FD +LCVG FF S E E+ Y G +
Sbjct: 5 PLRVLACGDVEGRINALFNRVNAIQKKSGQFDLLLCVGDFFGSSPEAEAEWATYKSGAKK 64
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI T +G AAS+ + DG ++ +N+ L G FT GL +A
Sbjct: 65 APIHTCILG-----------AASQETVKYFPSSDGCELAENITCLGRRGIFTGASGLQIA 113
Query: 122 YLSGRQS-SEGQQFGTYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTN--KAAASD 175
Y+SGR++ E ++ D+ AL A L VD+ LT++WP GV + +D
Sbjct: 114 YVSGREAHQEPAPSHCFTPKDITALVAPLLSNSKFRGVDILLTSQWPRGVCQYGNSPETD 173
Query: 176 M-LVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLG 229
M G+S ++++L ++KPRYH AG +GV Y R PY N + HV+RF+
Sbjct: 174 MKFCGVS-------SIADLADKLKPRYHFAGLEGVHYERLPYRNHVVLQENTQHVSRFIA 226
Query: 230 LAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYT-FLDQGSHSKEAAKRPSD 288
LA V N K+K+++A + P M + ++ + + T +PY + G +++A
Sbjct: 227 LATVNNPAKKKYLYAFNIIPMKNMDSTELVKQPQDVTENPYRKLMKDGKKERQSASMTDA 286
Query: 289 SVSDSQYWRYDVSQK--RQKHGG---GDGDK 314
+ + +D+ QK +++HG DGD+
Sbjct: 287 QEEPASQFFFDLGQKNPQRQHGRKRQSDGDR 317
|
|
| MGI|MGI:1919752 Cwf19l1 "CWF19-like 1, cell cycle control (S. pombe)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 411 (149.7 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 107/313 (34%), Positives = 163/313 (52%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RV+++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDVLFNRVRTIQKKSGNFDLLLCVGNFFGSAQDA--EWEEYKTGNKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G A ++ +AN DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLG-----------ANNEETANYFQGADGCELAENITYLGRKGVFTGSSGLQIV 111
Query: 122 YLSGRQS-SEGQQFGTYSQDDVDALRAL---AEEPGIVDLFLTNEWPSGVTNKAAASDML 177
YLSG +S E ++S DV +LR + A + VD+ LT+ WP V + +S
Sbjct: 112 YLSGTESLDEPVPAHSFSPKDVSSLRTMLCSASQFKGVDILLTSPWPKYVGSFGNSS--- 168
Query: 178 VGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLA 231
G D+ N S +S L +KPRYH A + +Y R PY N A H TRF+ LA
Sbjct: 169 -GEVDTKNCGSALISSLAVSLKPRYHFAALEKSYYERLPYRNHVVLQESAQHATRFIALA 227
Query: 232 PVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVS 291
VGN EK+K+++A S P M+ A++ + P+ T +PY D G + P+
Sbjct: 228 NVGNPEKKKYLYAFSIVPMKLMAVAELVKQPPDVTENPYR--DSGKQAAGGKHIPAPQEE 285
Query: 292 DSQYWRYDVSQKR 304
+ + +D+S+K+
Sbjct: 286 SACQFFFDLSEKQ 298
|
|
| UNIPROTKB|F1S8V2 CWF19L1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 401 (146.2 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
Identities = 107/321 (33%), Positives = 164/321 (51%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RV+++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDILFNRVRAIQKKSGNFDLLLCVGNFFGSTPDT--EWEEYKTGVKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G A ++ + +DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLG-----------ANNQETVKYFQDVDGCELAENITYLGRKGIFTGSSGLQIV 111
Query: 122 YLSGRQSSEGQQFG-TYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTNKAAASDML 177
YLSG +S G ++S DV +LR L P VD+ LT+ WP V N +S
Sbjct: 112 YLSGTESLNEPVPGYSFSPKDVSSLRMMLCSTPQFKGVDILLTSPWPKYVGNFGNSS--- 168
Query: 178 VGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLA 231
G D+ S +S L A +KPRYH A + +Y R PY N +A H TRF+ LA
Sbjct: 169 -GEVDTKKCGSALISSLAAGLKPRYHFAALEKTYYERLPYRNHIVLQENAQHATRFIALA 227
Query: 232 PVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVS 291
VGN EK+K+++A S P M AA++ + P+ T +PY G + + P+
Sbjct: 228 NVGNPEKKKYLYAFSIVPMKLMDAAELVKQPPDVTENPYR--KSGKEASIGKQIPAPEEE 285
Query: 292 DSQYWRYDVSQKRQKHGGGDG 312
+ + +D+++K+ + G
Sbjct: 286 SACQFFFDLNEKQGRKRSSTG 306
|
|
| UNIPROTKB|E1BG07 CWF19L1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 404 (147.3 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 106/321 (33%), Positives = 163/321 (50%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RV+++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDALFNRVRAIQKKSGNFDLLLCVGNFFGSTPDA--EWEEYKTGVKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G A ++ + +DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLG-----------ANNQETVKYFQDVDGCELAENITYLGRKGVFTGSSGLQIV 111
Query: 122 YLSGRQSSEGQQFG-TYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTNKAAASDML 177
YLSG +S G ++S DV +LR L P VD+ LT+ WP V N +S
Sbjct: 112 YLSGTESLNEPVPGYSFSPKDVSSLRTMLCSTPQFKGVDILLTSPWPKYVGNFGNSS--- 168
Query: 178 VGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLA 231
G D+ S +S L +KPRYH A + +Y R PY N +A H TRF+ LA
Sbjct: 169 -GEVDTKKCGSALISSLATGLKPRYHFASLEKTYYERLPYRNHIVLQENAQHATRFIALA 227
Query: 232 PVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVS 291
VGN EK+K+++A S P M AA++ + P+ T +PY G + + P+
Sbjct: 228 NVGNPEKKKYLYAFSIVPMKLMDAAELVKQPPDVTENPYR--KSGKEASTGKQTPAPEEE 285
Query: 292 DSQYWRYDVSQKRQKHGGGDG 312
+ + +D+++K+ + G
Sbjct: 286 SACQFFFDLNEKQGRKRSSTG 306
|
|
| RGD|1304716 Cwf19l1 "CWF19-like 1, cell cycle control (S. pombe)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 400 (145.9 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 106/321 (33%), Positives = 163/321 (50%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RV+++ K +G FD +LCVG FF + + E Y G +
Sbjct: 5 PLRLLACGDVEGKFDVLFNRVRTIQKKSGNFDLLLCVGNFFGSTQDAAWE--EYRTGSKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G A ++ +AN DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLG-----------ANNQETANYFQDADGCELAENITYLGRKGVFTGSSGLQIV 111
Query: 122 YLSGRQS-SEGQQFGTYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTNKAAASDML 177
YLSG +S E ++S DV +LR L P VD+ LT+ WP V + +S
Sbjct: 112 YLSGTESLDEPVPAYSFSPKDVSSLRTMLCSAPQFKGVDILLTSPWPKYVGSFGNSS--- 168
Query: 178 VGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLA 231
G D+ S +S L +KPRYH A + +Y R PY N A H TRF+ LA
Sbjct: 169 -GEVDTKQCGSALISSLAVSLKPRYHFAALEKSYYERLPYRNHVVLQESAQHATRFIALA 227
Query: 232 PVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVS 291
VGN EK+K+++A S P M+ A++ + P+ T +PY + G + + P+
Sbjct: 228 NVGNPEKKKYLYAFSIVPMKLMAVAELVKQPPDVTENPYR--ESGKQAAAGKQIPAPQEE 285
Query: 292 DSQYWRYDVSQKRQKHGGGDG 312
+ + +D+++K+ + G
Sbjct: 286 SACQFFFDLNEKQGRKRSSTG 306
|
|
| UNIPROTKB|Q69YN2 CWF19L1 "CWF19-like protein 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 395 (144.1 bits), Expect = 7.8e-62, Sum P(2) = 7.8e-62
Identities = 110/322 (34%), Positives = 164/322 (50%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RVQ++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDILFNRVQAIQKKSGNFDLLLCVGNFFGSTQDA--EWEEYKTGIKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G K A DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLGANNQETVKYFQDA-----------DGCELAENITYLGRKGIFTGSSGLQIV 111
Query: 122 YLSGRQSSEGQQFG-TYSQDDVDALRAL----AEEPGIVDLFLTNEWPSGVTNKAAASDM 176
YLSG +S G ++S DV +LR + ++ G VD+ LT+ WP V N +S
Sbjct: 112 YLSGTESLNEPVPGYSFSPKDVSSLRMMLCTTSQFKG-VDILLTSPWPKCVGNFGNSS-- 168
Query: 177 LVGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGL 230
G D+ S VS L +KPRYH A + +Y R PY N +A H TRF+ L
Sbjct: 169 --GEVDTKKCGSALVSSLATGLKPRYHFAALEKTYYERLPYRNHIILQENAQHATRFIAL 226
Query: 231 APVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSV 290
A VGN EK+K+++A S P M AA++ + P+ T +PY Q + + P +
Sbjct: 227 ANVGNPEKKKYLYAFSIVPMKLMDAAELVKQPPDVTENPYRKSGQEASIGKQILAPVEE- 285
Query: 291 SDSQYWRYDVSQKRQKHGGGDG 312
S Q++ +D+++K+ + G
Sbjct: 286 SACQFF-FDLNEKQGRKRSSTG 306
|
|
| UNIPROTKB|E2RJE9 CWF19L1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 393 (143.4 bits), Expect = 1.2e-61, Sum P(2) = 1.2e-61
Identities = 107/322 (33%), Positives = 164/322 (50%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RV+++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDVLFNRVRAIQKKSGNFDLLLCVGNFFGSTPDA--EWEKYKTGIKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G K A DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLGANNQETVKYFQDA-----------DGCELAENITYLGRKGIFTGSSGLQIV 111
Query: 122 YLSGRQSSEGQQFG-TYSQDDVDALRAL----AEEPGIVDLFLTNEWPSGVTNKAAASDM 176
YLSG +S G ++S DV +LR + ++ G VD+ LT+ WP V N +S
Sbjct: 112 YLSGTESLNEPVPGYSFSPKDVSSLRTMLCSTSQFKG-VDILLTSPWPKYVGNFGNSS-- 168
Query: 177 LVGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGL 230
G D+ S VS L ++KPRYH A + +Y R PY N +A H TRF+ L
Sbjct: 169 --GEVDTKKCGSALVSSLATDLKPRYHFAALEKTYYERLPYRNHIVLQENAQHATRFIAL 226
Query: 231 APVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSV 290
A VGN EK+K+++A S P M A++ + P+ T +PY + + + P +
Sbjct: 227 ANVGNPEKKKYLYAFSIVPMKLMETAELVKQPPDVTENPYRKSGKEASMGKQISAPEEE- 285
Query: 291 SDSQYWRYDVSQKRQKHGGGDG 312
S Q++ +D+++K+ + G
Sbjct: 286 SACQFF-FDLNEKQGRKRSSTG 306
|
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| UNIPROTKB|F1NLI3 F1NLI3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 394 (143.8 bits), Expect = 3.3e-61, Sum P(2) = 3.3e-61
Identities = 106/318 (33%), Positives = 165/318 (51%)
Query: 7 LLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIP 66
L CGDV GRL LF RV+++ +G FD +LCVG FF +S+ E+ Y G + PIP
Sbjct: 1 LACGDVEGRLETLFGRVRAIQSKSGRFDMLLCVGNFFSSTSDA--EWAEYRSGAKKAPIP 58
Query: 67 TYFIGDYGVGAAKVLLAASKNSANQGFK-MDGFKVTDNLFWLKGSGNFT-LHGLSVAYLS 124
T+ +G A+ F + G ++ +N+ +L G F+ GL +AYLS
Sbjct: 59 TFVLG------------ANNQETMHCFPHVTGCELAENITYLGRRGLFSGSSGLQIAYLS 106
Query: 125 GRQSS-EGQQFGTYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTNKAAASDMLVGI 180
G +S E ++S DV L++ L P VD+ LT+ WP GV + A + G
Sbjct: 107 GTESQDEPTPAYSFSSKDVTELKSSLLSTPDFKGVDILLTSPWPRGVESFANSP----GE 162
Query: 181 SDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSNVDAV-----HVTRFLGLAPVG 234
D+ ST +S+L A +KPRYH A + +Y R PY N + HVTRF+ LA VG
Sbjct: 163 IDTKKCGSTLISDLAASLKPRYHFAALEKAYYERLPYRNHTVLQETPQHVTRFIALAEVG 222
Query: 235 NKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQ 294
N K+K+++A S P + M A++ + + T +PY L +G+ + + + Q
Sbjct: 223 NTSKKKYLYAFSIVPMSLMDPAELVKQPQDVTENPYRKLRKGTQKTKVLVSNQEETA-CQ 281
Query: 295 YWRYDVSQKRQKHGGGDG 312
++ +D+++ + K DG
Sbjct: 282 FF-FDLNKHQGKKRPSDG 298
|
|
| UNIPROTKB|E1C959 E1C959 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 397 (144.8 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 103/287 (35%), Positives = 153/287 (53%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV GRL LF RV+++ +G FD +LCVG FF +S+ E+ Y G +
Sbjct: 5 PLRVLACGDVEGRLETLFGRVRAIQSKSGRFDMLLCVGNFFSSTSDA--EWAEYRSGAKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFK-MDGFKVTDNLFWLKGSGNFT-LHGLSV 120
PIPT+ +G A+ F + G ++ +N+ +L G F+ GL +
Sbjct: 63 APIPTFVLG------------ANNQETMHCFPHVTGCELAENITYLGRRGLFSGSSGLQI 110
Query: 121 AYLSGRQSS-EGQQFGTYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTNKAAASDM 176
AYLSG +S E ++S DV L++ L P VD+ LT+ WP GV + A +
Sbjct: 111 AYLSGTESQDEPTPAYSFSSKDVTELKSSLLSTPDFKGVDILLTSPWPRGVESFANSP-- 168
Query: 177 LVGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSNVDAV-----HVTRFLGL 230
G D+ ST +S+L A +KPRYH A + +Y R PY N + HVTRF+ L
Sbjct: 169 --GEIDTKKCGSTLISDLAASLKPRYHFAALEKAYYERLPYRNHTVLQETPQHVTRFIAL 226
Query: 231 APVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGS 277
A VGN K+K+++A S P + M A++ + + T +PY L +G+
Sbjct: 227 AEVGNTSKKKYLYAFSIVPMSLMDPAELVKQPQDVTENPYRKLRKGT 273
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q69NK8 | C3H59_ORYSJ | No assigned EC number | 0.5882 | 0.9654 | 0.8662 | yes | no |
| Q84WU9 | C3H64_ARATH | No assigned EC number | 0.7111 | 0.9654 | 0.8909 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | eugene3.02850004 | hypothetical protein (606 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 550 | |||
| pfam04677 | 122 | pfam04677, CwfJ_C_1, Protein similar to CwfJ C-ter | 4e-42 | |
| cd07380 | 150 | cd07380, MPP_CWF19_N, Schizosaccharomyces pombe CW | 2e-24 | |
| cd07380 | 150 | cd07380, MPP_CWF19_N, Schizosaccharomyces pombe CW | 8e-24 | |
| cd00844 | 262 | cd00844, MPP_Dbr1_N, Dbr1 RNA lariat debranching e | 7e-05 |
| >gnl|CDD|218208 pfam04677, CwfJ_C_1, Protein similar to CwfJ C-terminus 1 | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 4e-42
Identities = 53/115 (46%), Positives = 75/115 (65%)
Query: 384 SANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPE 443
CWFCLS+P++E HLIVS+G Y ALPKGPLV H L+IP++H+P+T+S E
Sbjct: 7 IKILPDSCWFCLSNPNLEKHLIVSIGNKAYLALPKGPLVSGHCLIIPIQHIPSTLSLDEE 66
Query: 444 CEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQAVPIPTSKAAAVQDIF 498
E+ F+ +L + YK+QGK+AVFFE S+R H ++Q +P+P S + F
Sbjct: 67 VWDEIRNFRKALTLMYKSQGKDAVFFEIASQRRPHLHIQCIPVPKSISKLAPLYF 121
|
This region is found in the N terminus of Schizosaccharomyces pombe protein CwfJ. CwfJ is part of the Cdc5p complex involved in mRNA splicing. Length = 122 |
| >gnl|CDD|163623 cd07380, MPP_CWF19_N, Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 98.9 bits (247), Expect = 2e-24
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 7 LLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIP 66
L+CGDV GRL LF++V ++NK GPFDA+LCVG FF D + +E Y +G ++PIP
Sbjct: 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDED-DEELEAYKDGSKKVPIP 59
Query: 67 TYFIGDYGVGA 77
TYF+G G
Sbjct: 60 TYFLGGNNPGV 70
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 150 |
| >gnl|CDD|163623 cd07380, MPP_CWF19_N, Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 97.4 bits (243), Expect = 8e-24
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
Query: 155 VDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYARE 214
VD+ LT+EWP G++ S + + ++EL ++KPRYH AG +GVFY RE
Sbjct: 70 VDILLTSEWPKGISKL---SKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE 126
Query: 215 PYSNVDAV-----HVTRFLGLAPV 233
PY N + HVTRF+GLAPV
Sbjct: 127 PYRNDSVLEEKAEHVTRFIGLAPV 150
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 150 |
| >gnl|CDD|163619 cd00844, MPP_Dbr1_N, Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 7e-05
Identities = 62/261 (23%), Positives = 102/261 (39%), Gaps = 61/261 (23%)
Query: 14 GRLNQLFKRVQSVNKSAG-PFDAVLCVGQF-------------FPDSSELLDEFMNYVEG 59
G L+++++ ++ + K G D ++C G F P + +F Y G
Sbjct: 9 GELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSG 68
Query: 60 RSEIPIPTYFIGDYGVG---AAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLH 116
+ PI T FIG G A+ L G+ V N+++L +G
Sbjct: 69 EKKAPILTIFIG----GNHEASNYL---------WELPYGGW-VAPNIYYLGYAGVVNFG 114
Query: 117 GLSVAYLSGRQSSEGQQFG-----TYSQD-----------DVDALRALAEEPGIVDLFLT 160
GL +A LSG S + G YS+D +V L+ L + +D+FL+
Sbjct: 115 GLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLKQLKQP---IDIFLS 171
Query: 161 NEWPSGVTNKAAASDML---VGISDSSNTDSTVS----ELVAEIKPRYHIAGSKGVFYA- 212
++WP G+ +L + + S EL+ +KPRY + V +A
Sbjct: 172 HDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFAA 231
Query: 213 ---REPYSNVDAVHVTRFLGL 230
E S + T+FL L
Sbjct: 232 LVPHENKSPGNTNKETKFLAL 252
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 550 | |||
| KOG2476 | 528 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 100.0 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 100.0 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 100.0 | |
| KOG2477 | 628 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| PF04677 | 121 | CwfJ_C_1: Protein similar to CwfJ C-terminus 1; In | 100.0 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.89 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.89 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.86 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.63 | |
| PRK10687 | 119 | purine nucleoside phosphoramidase; Provisional | 99.63 | |
| COG0537 | 138 | Hit Diadenosine tetraphosphate (Ap4A) hydrolase an | 99.54 | |
| cd01275 | 126 | FHIT FHIT (fragile histidine family): FHIT protein | 99.52 | |
| cd01277 | 103 | HINT_subgroup HINT (histidine triad nucleotide-bin | 99.5 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.48 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.43 | |
| cd01276 | 104 | PKCI_related Protein Kinase C Interacting protein | 99.42 | |
| PF01230 | 98 | HIT: HIT domain; InterPro: IPR001310 The Histidine | 99.35 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.33 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 99.32 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.3 | |
| cd01278 | 104 | aprataxin_related aprataxin related: Aprataxin, a | 99.29 | |
| cd00468 | 86 | HIT_like HIT family: HIT (Histidine triad) protein | 99.22 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.19 | |
| KOG3275 | 127 | consensus Zinc-binding protein of the histidine tr | 99.19 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.09 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.08 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.06 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 99.05 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 99.04 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.0 | |
| TIGR00209 | 347 | galT_1 galactose-1-phosphate uridylyltransferase, | 98.93 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.92 | |
| PRK11720 | 346 | galactose-1-phosphate uridylyltransferase; Provisi | 98.9 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 98.86 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.85 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 98.84 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 98.82 | |
| PHA03008 | 234 | hypothetical protein; Provisional | 98.8 | |
| KOG3379 | 150 | consensus Diadenosine polyphosphate hydrolase and | 98.77 | |
| PLN02643 | 336 | ADP-glucose phosphorylase | 98.71 | |
| cd00608 | 329 | GalT Galactose-1-phosphate uridyl transferase (Gal | 98.7 | |
| PF11969 | 116 | DcpS_C: Scavenger mRNA decapping enzyme C-term bin | 98.69 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.68 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 98.67 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.64 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 98.6 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 98.59 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 98.58 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 98.55 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 98.49 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 98.46 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.35 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 98.33 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.3 | |
| PHA02239 | 235 | putative protein phosphatase | 98.27 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 98.22 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 98.21 | |
| PLN02533 | 427 | probable purple acid phosphatase | 98.2 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 98.19 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 98.18 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.18 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 98.15 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 98.12 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.1 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.94 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 97.94 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.94 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 97.85 | |
| KOG4359 | 166 | consensus Protein kinase C inhibitor-like protein | 97.79 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 97.77 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 97.76 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 97.76 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 97.7 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 97.7 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.67 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 97.67 | |
| PF04676 | 98 | CwfJ_C_2: Protein similar to CwfJ C-terminus 2; In | 97.66 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 97.65 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 97.61 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 97.59 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 97.59 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 97.58 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 97.58 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 97.54 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 97.54 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 97.49 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 97.33 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.32 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 97.29 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.21 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 97.2 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 97.18 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 97.17 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 97.04 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 96.93 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 96.92 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 96.91 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 96.81 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 96.76 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 96.73 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 96.69 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 96.61 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 96.6 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 96.59 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 96.57 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 96.52 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 96.48 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 96.48 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 96.41 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 96.4 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 96.34 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 96.26 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 96.2 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 96.02 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 95.88 | |
| COG1085 | 338 | GalT Galactose-1-phosphate uridylyltransferase [En | 95.85 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 95.71 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 95.71 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 95.57 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 95.54 | |
| KOG0371 | 319 | consensus Serine/threonine protein phosphatase 2A, | 95.23 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 95.05 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 94.87 | |
| PF02744 | 166 | GalP_UDP_tr_C: Galactose-1-phosphate uridyl transf | 94.69 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 94.58 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 94.16 | |
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 94.07 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 93.86 | |
| KOG0373 | 306 | consensus Serine/threonine specific protein phosph | 93.68 | |
| KOG0372 | 303 | consensus Serine/threonine specific protein phosph | 93.44 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 93.37 | |
| KOG1595 | 528 | consensus CCCH-type Zn-finger protein [General fun | 93.27 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 93.16 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 92.08 | |
| cd00608 | 329 | GalT Galactose-1-phosphate uridyl transferase (Gal | 91.48 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 91.3 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 91.29 | |
| KOG0374 | 331 | consensus Serine/threonine specific protein phosph | 91.25 | |
| KOG2958 | 354 | consensus Galactose-1-phosphate uridylyltransferas | 91.13 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 90.41 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 89.68 | |
| COG4360 | 298 | APA2 ATP adenylyltransferase (5',5'''-P-1,P-4-tetr | 89.45 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 89.13 | |
| PLN02643 | 336 | ADP-glucose phosphorylase | 88.69 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 88.59 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 88.56 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 87.81 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 84.51 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 84.14 | |
| COG1085 | 338 | GalT Galactose-1-phosphate uridylyltransferase [En | 83.74 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 82.33 |
| >KOG2476 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-104 Score=807.08 Aligned_cols=459 Identities=43% Similarity=0.746 Sum_probs=386.8
Q ss_pred CCC--CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChH
Q 008885 1 MSP--PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAA 78 (550)
Q Consensus 1 M~~--~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~ 78 (550)
|+. .|||||||+.|+|+.+|++|+++++|+||||++||+|+||+. .....+|.+|.+|.+++|+||||.++|...+.
T Consensus 1 Ma~~~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~-~~~~~e~~~ykng~~~vPiptY~~g~~~~~~~ 79 (528)
T KOG2476|consen 1 MAQADAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGH-DTQNAEVEKYKNGTKKVPIPTYFLGDNANETE 79 (528)
T ss_pred CCCCCceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCC-ccchhHHHHHhcCCccCceeEEEecCCCCccc
Confidence 773 599999999999999999999999999999999999999996 33466899999999999999999999986555
Q ss_pred HHHHHhhccccccCcccCCceecCcEEEcCCCCeEEE-cCeEEEEEeCccCCCCCCCCCCCHHHHHHHHH---hhcCCCC
Q 008885 79 KVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL-HGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA---LAEEPGI 154 (550)
Q Consensus 79 ~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i-~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~---l~~~~~~ 154 (550)
.++.. .+|.|||+||+|||++|++++ +|++||||||.++..... ..|+..|+++|+. ..+..++
T Consensus 80 ky~~n-----------~~g~Ei~~Nlt~Lg~~G~~~l~sGl~IaYLsG~e~~~~~~-~~fs~~dv~~l~~~~~~~~~~~g 147 (528)
T KOG2476|consen 80 KYFEN-----------SDGKEIAENLTYLGRKGTYKLASGLTIAYLSGPESSEKGE-SKFSQADVDELRHRLDTQKEFKG 147 (528)
T ss_pred eeccc-----------CCCcccccceeeecccceEeecCCcEEEEeeccccccccc-cccCHHHHHHHhcccccccccCC
Confidence 55542 357899999999999999986 599999999998765442 3789999999883 3345689
Q ss_pred ccEEEeCCCCcccccc-ccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCC-----CCcceeEEE
Q 008885 155 VDLFLTNEWPSGVTNK-AAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNV-----DAVHVTRFL 228 (550)
Q Consensus 155 vDILLTh~wP~gi~~~-~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~-----~~~~~TRFI 228 (550)
||||||++||.+|+.. +.. + +.....||..|++|+.++||||||+|..++||||+||+|+ +..++||||
T Consensus 148 vDILlTseWP~~v~e~~ss~---~--~~~~~~gs~lvs~La~~lkPRYHFa~~~~v~YErePyrn~~~~~~~~~h~TRFI 222 (528)
T KOG2476|consen 148 VDILLTSEWPADVQERNSSL---P--ESKRLCGSELVSELAAELKPRYHFAGSDGVFYEREPYRNHAALNEEAGHVTRFI 222 (528)
T ss_pred ccEEEecCCcchhhhccccC---c--cccCCcchHHHHHHHHhcCcceEeccCCCceeecccccchhhhcccccceeeee
Confidence 9999999999999874 221 1 1124689999999999999999999999999999999996 478999999
Q ss_pred EcCCCCCcccceeEEEeccCCCCCCchhcccCCCCCCCCCCCccccCCCCcccccCCCCCCCCCCcccccccccccccCC
Q 008885 229 GLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQKRQKHG 308 (550)
Q Consensus 229 ~La~~g~~~K~Kw~yAf~i~p~~~~~~~~l~~~p~~~T~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (550)
+||++||++|+||+|||||.|+.+|.+.+|.+.|+|+|+|||.... .. -...+|..++ ++.+|+||+++++.+
T Consensus 223 ~LA~vGN~ek~K~lYAfs~~P~~~~~~~el~a~Ppn~~~~Py~~~d--~~-~qs~kr~~~s--~~~q~ffd~~~~~~~-- 295 (528)
T KOG2476|consen 223 ALAKVGNPEKQKWLYAFSLKPMGTMELAELTAKPPNLIPNPYNLED--VA-IQSNKRPNSS--ESTQYFFDMDKQQLS-- 295 (528)
T ss_pred ehhhcCCccccceeeeecccccccchhhhcccCCCccCCCCcchhh--hh-hhhccCCCCC--ccceeeeccCccccc--
Confidence 9999999999999999999999999999999999999999996211 01 1235555443 245556998633322
Q ss_pred CCCCCCcceeeeccCCCCCCCcccccCCchhhhhhccccchhhhcccccCCCCCccccCCcCCCccccccCCcccccCCC
Q 008885 309 GGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRS 388 (550)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (550)
+.+||++..+++. +++|. +.+.+
T Consensus 296 ------------------------------------------------~~~gr~~h~~~~~-----kgpR~----p~~~p 318 (528)
T KOG2476|consen 296 ------------------------------------------------KMNGRESHSDKSE-----KGPRK----PKIPP 318 (528)
T ss_pred ------------------------------------------------cCCcccccccccc-----cCCCC----CCCCC
Confidence 1223333222211 11111 23557
Q ss_pred CCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCceEE
Q 008885 389 KECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVF 468 (550)
Q Consensus 389 ~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~~~~~v~ 468 (550)
+.||||++||++|+||||+||++||++||||||+.||||||||+|++++..+++|+++||.+|+.+|++||+++|+.+||
T Consensus 319 g~CwFCLSnP~vEkHLIVsIG~~~YlAlaKGpLs~~HvlIipi~H~p~~~~ls~ev~~Ei~kykaal~~myk~~g~~~vv 398 (528)
T KOG2476|consen 319 GSCWFCLSNPNVEKHLIVSIGNHFYLALAKGPLSSDHVLIIPIEHIPSLVPLSAEVTQEINKYKAALRKMYKKQGKDAVV 398 (528)
T ss_pred CceEEEecCCChhhheEEEecceeEEeecCCCCCCCeEEEEEcccccccccCCHHHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCcCeEEEEEeecCCCchHHHHHHHHHHHHHcCCccccccCCCCcchhhhhhhhcCCCCCeEEEEcCCCeeeee
Q 008885 469 FEWLSKRGTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGFGRLA 547 (550)
Q Consensus 469 ~E~~~~~~~H~hi~~vPvp~~~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pYf~ve~~~G~~~v~ 547 (550)
||+.+.++.|+|+|+||||+.....++..|..+|++.++|+.+.+... .|.+....+.|||+||||+|..+++
T Consensus 399 fE~~~~rs~Hlq~Qvipvpks~s~~ik~~F~~~A~eag~ef~t~~~~~------s~~~~~n~~l~yF~vELPdg~~L~h 471 (528)
T KOG2476|consen 399 FERQSYRSVHLQLQVIPVPKSSSRQIKSSFETAAEEAGLEFETYDSHS------SIKNQSNNGLPYFVVELPDGSILIH 471 (528)
T ss_pred EEeecccceeeEEEEEeccchhhhhhhHHHHHHHHHcCceEEecCcch------hhhhhhccCCceEEEECCCCCeehh
Confidence 996689999999999999999999999999999999999999887543 4677777889999999999998875
|
|
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=363.97 Aligned_cols=223 Identities=26% Similarity=0.446 Sum_probs=178.6
Q ss_pred EEEEcCCCCChHHHHHHHHHHhhhcC-CCcEEEEecCCCCCCh-------------hhHHHHHHHhcccCCCCccEEEEe
Q 008885 6 ILLCGDVLGRLNQLFKRVQSVNKSAG-PFDAVLCVGQFFPDSS-------------ELLDEFMNYVEGRSEIPIPTYFIG 71 (550)
Q Consensus 6 ILv~GDvhG~~~~l~~kv~~l~~k~G-pfD~li~~GDff~~~~-------------~~~~~~~~~l~g~~~~p~ptyfv~ 71 (550)
|.|+||+||+|+.++++++.++++++ ++|+|||||||+.... ....+|.+|++|..++|+|||||+
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 68999999999999999999998865 8999999999976421 124578899999999999999999
Q ss_pred cCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCC-----CCCCCCHHHHHHHH
Q 008885 72 DYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQ-----QFGTYSQDDVDALR 146 (550)
Q Consensus 72 GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~-----~~~~~te~di~~L~ 146 (550)
||||+ .+++..+. .|+++++||+||+++++++++|+||+|+||++..... ...+|+++++.++.
T Consensus 81 GNHE~-~~~l~~l~----------~gg~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~rs~y 149 (262)
T cd00844 81 GNHEA-SNYLWELP----------YGGWVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAY 149 (262)
T ss_pred CCCCC-HHHHHhhc----------CCCeecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHHHHhh
Confidence 99997 45666554 3679999999999999999999999999998753321 13478888876533
Q ss_pred --------HhhcCCCCccEEEeCCCCcccccccccc-------ccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcc
Q 008885 147 --------ALAEEPGIVDLFLTNEWPSGVTNKAAAS-------DMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 211 (550)
Q Consensus 147 --------~l~~~~~~vDILLTh~wP~gi~~~~~~~-------~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~ 211 (550)
++.....+|||||||+||.||.+.++.. .+..++...+.||+.+++|++.+|||||||||.|.+|
T Consensus 150 ~~r~~~~~kl~~~~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f 229 (262)
T cd00844 150 HVRNIEVFKLKQLKQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKF 229 (262)
T ss_pred hhhHHHHHHHHhcCCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCccc
Confidence 2222245899999999999998876632 1222223347899999999999999999999999988
Q ss_pred c-cccccCC---CCcceeEEEEcCCCCCccccee
Q 008885 212 A-REPYSNV---DAVHVTRFLGLAPVGNKEKQKF 241 (550)
Q Consensus 212 e-r~Py~~~---~~~~~TRFI~La~~g~~~K~Kw 241 (550)
| ++||+|. +..++|||||||++-+ +++|
T Consensus 230 ~~~~~~~~~~~~~~~~~TRFiaL~k~~~--~~~~ 261 (262)
T cd00844 230 AALVPHENKSPGNTNKETKFLALDKCLP--GRDF 261 (262)
T ss_pred ceecCCcccccCCCCcceEEEEcccccC--CCCC
Confidence 8 5699984 3578999999999977 4444
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=306.39 Aligned_cols=145 Identities=50% Similarity=0.933 Sum_probs=127.6
Q ss_pred EEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHHhhc
Q 008885 7 LLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASK 86 (550)
Q Consensus 7 Lv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~l~~ 86 (550)
||+||+||+++++|++++++++|+||||++|||||||+...+. ++|.+|++|+.++|+||||++|||+
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~-~~~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDD-EELEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccch-hhHHHHhcCCccCCCCEEEECCCCC-----------
Confidence 7999999999999999999999999999999999999976543 6899999999999999999999851
Q ss_pred cccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCCCcc
Q 008885 87 NSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSG 166 (550)
Q Consensus 87 ~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh~wP~g 166 (550)
++||||||+||+|
T Consensus 69 -------------------------------------------------------------------~~DILlTh~wP~g 81 (150)
T cd07380 69 -------------------------------------------------------------------GVDILLTSEWPKG 81 (150)
T ss_pred -------------------------------------------------------------------CCCEEECCCCchh
Confidence 4899999999999
Q ss_pred ccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCC-----CcceeEEEEcCCC
Q 008885 167 VTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVD-----AVHVTRFLGLAPV 233 (550)
Q Consensus 167 i~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~-----~~~~TRFI~La~~ 233 (550)
|.+.++... .....+.||+.|++|++++|||||||||.+.||||+||+|+. ..++||||+||++
T Consensus 82 i~~~~~~~~---~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~Pf~~~~~~~~~~~~~TRFi~La~~ 150 (150)
T cd07380 82 ISKLSKVPF---EETLLICGSDLIAELAKKLKPRYHFAGLEGVFYEREPYRNDSVLEEKAEHVTRFIGLAPV 150 (150)
T ss_pred hhhhCCCcc---cccccCCCCHHHHHHHHHcCCCeEeecCCCceEeecCccCCCccccccCcceeEEeccCC
Confidence 976554211 111247899999999999999999999999999999999986 3789999999985
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-40 Score=326.22 Aligned_cols=227 Identities=25% Similarity=0.441 Sum_probs=183.2
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhc-CCCcEEEEecCCCCC-------------ChhhHHHHHHHhcccCCCCccEEE
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSA-GPFDAVLCVGQFFPD-------------SSELLDEFMNYVEGRSEIPIPTYF 69 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~-GpfD~li~~GDff~~-------------~~~~~~~~~~~l~g~~~~p~ptyf 69 (550)
|||.|-|++||.++.+++.+..++++. +|+|++||||||... .+..+.+|..|++|+.++|+||+|
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 799999999999999999999998874 599999999999753 234677899999999999999999
Q ss_pred EecCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCC-----CCCCCCCHH----
Q 008885 70 IGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEG-----QQFGTYSQD---- 140 (550)
Q Consensus 70 v~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~-----~~~~~~te~---- 140 (550)
|+||||. .+++.+|+ .|+|+++||+|||..||+.++|+||||+||++..-. ..+.+|+.+
T Consensus 81 IGGNHEA-snyL~eLp----------yGGwVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~stiRs 149 (456)
T KOG2863|consen 81 IGGNHEA-SNYLQELP----------YGGWVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNSTIRS 149 (456)
T ss_pred ecCchHH-HHHHHhcc----------cCceeccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccchhhhh
Confidence 9999995 67888886 377999999999999999999999999999976321 113344333
Q ss_pred -------HHHHHHHhhcCCCCccEEEeCCCCccccccccc-------cccccccCCCCCCcHHHHHHHHHhCCCEEEEcc
Q 008885 141 -------DVDALRALAEEPGIVDLFLTNEWPSGVTNKAAA-------SDMLVGISDSSNTDSTVSELVAEIKPRYHIAGS 206 (550)
Q Consensus 141 -------di~~L~~l~~~~~~vDILLTh~wP~gi~~~~~~-------~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh 206 (550)
|+..|+.+ ..++||+|||+||.||...++. +++.++++....||+++.+|+++|||+|||++|
T Consensus 150 iYHvR~~dV~~Lkql---k~piDIfLSHDWP~GI~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~LkP~yWfsAH 226 (456)
T KOG2863|consen 150 IYHVRISDVAKLKQL---KHPIDIFLSHDWPRGIYYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLKPQYWFSAH 226 (456)
T ss_pred hhhhhhhhhHHHHhh---cCcceEEeecCCCcchhhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhCcchhhhhh
Confidence 44455554 5899999999999999887764 234556666689999999999999999999999
Q ss_pred CCCccccccccCCCCcceeEEEEcCCCCCcccceeEEEecc
Q 008885 207 KGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSP 247 (550)
Q Consensus 207 ~~~f~er~Py~~~~~~~~TRFI~La~~g~~~K~Kw~yAf~i 247 (550)
.|+-|...-- +..+.++|.|++|+++-.. ++++.-+++
T Consensus 227 LH~KFaA~v~-H~~~~~~tkflaldKclp~--~~flqile~ 264 (456)
T KOG2863|consen 227 LHVKFAALVQ-HNKRSHVTKFLALDKCLPN--RNFLQILEI 264 (456)
T ss_pred HhhHHhhhhc-ccCcCCCcccccccccCCC--cchhhhccC
Confidence 9986664322 2236889999999999763 334444443
|
|
| >KOG2477 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=336.75 Aligned_cols=164 Identities=22% Similarity=0.453 Sum_probs=150.9
Q ss_pred CCCCCCcccCCCCCCCcceEEEECCEEEEEecCC-CCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 008885 386 NRSKECWFCLSSPSVESHLIVSVGEYYYCALPKG-PLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGK 464 (550)
Q Consensus 386 ~~~~~C~FC~~~~~~~~hliis~g~~~yl~l~kg-pl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~~~ 464 (550)
...++|.||+.++..++|+|||+|..+||+||.. +|..|||+|||.+|.++..+||+++|+||++|+++|+.||++.+.
T Consensus 404 ~~lD~C~rCfds~klpkhlviSlg~~tYLsLp~~~gL~~gHciIvptqH~~~t~slDEdvWDEIrnfrKcL~~Mfas~n~ 483 (628)
T KOG2477|consen 404 HVLDTCPRCFDSEKLPKHLVISLGHRTYLSLPTQPGLAKGHCIIVPTQHRINTLSLDEDVWDEIRNFRKCLALMFASMNL 483 (628)
T ss_pred HHhhhchhhhcccccccceeEEeccceeEeccccCccccCceEEecccccccccccchHHHHHHHHHHHHHHHHHHhcCC
Confidence 3578999999999999999999999999999995 699999999999999999999999999999999999999999999
Q ss_pred ceEEEeec--CCCcCeEEEEEeecCCCchHHHHHHHHHHHHHcCCccccccC-CCCcchhhhhhhhcCCCCCeEEEEc--
Q 008885 465 EAVFFEWL--SKRGTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKS-SKSSDGRRSLRAQFDRNCSFFYVEL-- 539 (550)
Q Consensus 465 ~~v~~E~~--~~~~~H~hi~~vPvp~~~~~~~~~~F~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~i~~~~pYf~ve~-- 539 (550)
+|||||.+ -++.+|+-|||||||.+++++++.||++|+.+++.||++++. ..+++.+++||.+||+|+|||||+|
T Consensus 484 dviFyE~a~~l~rrpH~~IeCIPvpqeig~map~YFKkAI~esE~Ews~~~nkkliets~k~lR~~IpKglpYfhV~Fgl 563 (628)
T KOG2477|consen 484 DVIFYENAPSLQRRPHTAIECIPVPQEIGSMAPAYFKKAISESEEEWSHRKNKKLIETSKKALRKMIPKGLPYFHVWFGL 563 (628)
T ss_pred CeEEEeccCccccCCceeEEEeechHHhhhhhhHHHHHHHhhhHHHHHhhhHHHHHHhhHHHHHHhcccCCCeEEEEEec
Confidence 99999933 245799999999999999999999999999999999975442 3345667899999999999999997
Q ss_pred CCCeeeeecC
Q 008885 540 PEGFGRLAEH 549 (550)
Q Consensus 540 ~~G~~~v~e~ 549 (550)
++|++||||+
T Consensus 564 d~GfaHVIEd 573 (628)
T KOG2477|consen 564 DGGFAHVIED 573 (628)
T ss_pred cCceeeeecc
Confidence 8999999996
|
|
| >PF04677 CwfJ_C_1: Protein similar to CwfJ C-terminus 1; InterPro: IPR006768 This group of sequences contain a conserved C-terminal domain which is found in the Schizosaccharomyces pombe (Fission yeast) protein Cwf19 (Q09909 from SWISSPROT) and its homologues | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-38 Score=279.06 Aligned_cols=116 Identities=43% Similarity=0.850 Sum_probs=110.9
Q ss_pred ccCCCCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 008885 384 SANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQG 463 (550)
Q Consensus 384 ~~~~~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~~ 463 (550)
..+.+++||||++|+++++|||||+|+++||+||+|||.+|||||||++|++|+.++|+++|+||++|+++|++||+++|
T Consensus 6 ~~~~~~~C~fCl~n~~~~khliisiG~~~YLalpkg~L~~gH~lIvPi~H~~s~~~~de~~~~Ei~~f~~~L~~mf~~~~ 85 (121)
T PF04677_consen 6 QNKAPDNCWFCLSNPNVEKHLIISIGDEVYLALPKGPLVPGHCLIVPIQHVPSLTELDEEVWEEIRNFQKSLRKMFASQG 85 (121)
T ss_pred cCCCCCCCCCccCCCCccceEEEEEcCcEEEEeCCCCccCCEEEEEecceecccccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 34568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeecCCCcCeEEEEEeecCCCchHHHHHHHH
Q 008885 464 KEAVFFEWLSKRGTHANLQAVPIPTSKAAAVQDIFN 499 (550)
Q Consensus 464 ~~~v~~E~~~~~~~H~hi~~vPvp~~~~~~~~~~F~ 499 (550)
+++||||+...+..|+||||||||+++++.++.|||
T Consensus 86 ~~vvf~E~~~~~~~H~~iq~vPvp~~~~~~~~~yFk 121 (121)
T PF04677_consen 86 KDVVFFERVRKRNPHTHIQCVPVPKELGEKAPSYFK 121 (121)
T ss_pred CCEEEEEEeCCCCcEEEEEEEEcCHHHHHhhhhhcC
Confidence 999999955677899999999999999999999996
|
Cwf19 is part of the Cdc5p complex involved in mRNA splicing []. This domain is found in association with IPR006767 from INTERPRO, which is generally C-terminal and adjacent to this domain. |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.3e-22 Score=190.21 Aligned_cols=198 Identities=17% Similarity=0.210 Sum_probs=143.7
Q ss_pred CCCCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCC----CCChhhHHHH-HHHhcccCCCCccEEEEecCCC
Q 008885 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFF----PDSSELLDEF-MNYVEGRSEIPIPTYFIGDYGV 75 (550)
Q Consensus 1 M~~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff----~~~~~~~~~~-~~~l~g~~~~p~ptyfv~GNhe 75 (550)
|.+||||++.|.||+.+.+-+.+.....+ .+|+++++||+- ++.....+.+ .+.+ ....+|+|+++||+|
T Consensus 1 ~~~mkil~vtDlHg~~~~~~k~~~~~~~~--~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l---~~~~~~v~avpGNcD 75 (226)
T COG2129 1 IKKMKILAVTDLHGSEDSLKKLLNAAADI--RADLLVIAGDLTYFHFGPKEVAEELNKLEAL---KELGIPVLAVPGNCD 75 (226)
T ss_pred CCcceEEEEeccccchHHHHHHHHHHhhc--cCCEEEEecceehhhcCchHHHHhhhHHHHH---HhcCCeEEEEcCCCC
Confidence 56899999999999997655444443322 589999999985 3322222221 1222 567799999999976
Q ss_pred ChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHH-hhc-CCC
Q 008885 76 GAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA-LAE-EPG 153 (550)
Q Consensus 76 ~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~-l~~-~~~ 153 (550)
+..+.+.+.. . ..|++ ..+.+++|+.|.|+||+.++++++.++|+|+++....+ +.+ ...
T Consensus 76 -~~~v~~~l~~---------~----~~~v~----~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~ 137 (226)
T COG2129 76 -PPEVIDVLKN---------A----GVNVH----GRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN 137 (226)
T ss_pred -hHHHHHHHHh---------c----ccccc----cceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC
Confidence 5666666541 1 23444 36889999999999999999999999999999876443 321 222
Q ss_pred CccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCC
Q 008885 154 IVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPV 233 (550)
Q Consensus 154 ~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~ 233 (550)
.+-||+||.||+|..+.. |.+ ..++||.+|+++++++||+.++|||.|. .+.-+..+.|.|||+|+.
T Consensus 138 ~~~Il~~HaPP~gt~~d~-----~~g--~~hvGS~~vr~~ieefqP~l~i~GHIHE------s~G~d~iG~TivVNPG~~ 204 (226)
T COG2129 138 PVNILLTHAPPYGTLLDT-----PSG--YVHVGSKAVRKLIEEFQPLLGLHGHIHE------SRGIDKIGNTIVVNPGPL 204 (226)
T ss_pred cceEEEecCCCCCccccC-----CCC--ccccchHHHHHHHHHhCCceEEEeeecc------cccccccCCeEEECCCCc
Confidence 223999999999996531 222 1489999999999999999999999773 122236789999999996
Q ss_pred C
Q 008885 234 G 234 (550)
Q Consensus 234 g 234 (550)
+
T Consensus 205 ~ 205 (226)
T COG2129 205 G 205 (226)
T ss_pred c
Confidence 5
|
|
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=193.27 Aligned_cols=195 Identities=17% Similarity=0.209 Sum_probs=134.4
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHH
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLL 82 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~ 82 (550)
.+|||+++|+||++..+-+.++.+ ++. .+|+||++||+...... .+++.+++.-...++.|+|+|+||||.+ +.+
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~-~~~-~~D~vv~~GDl~~~g~~-~~~~~~~l~~l~~l~~pv~~V~GNhD~~--v~~ 78 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLA-PET-GADAIVLIGNLLPKAAK-SEDYAAFFRILGEAHLPTFYVPGPQDAP--LWE 78 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHH-hhc-CCCEEEECCCCCCCCCC-HHHHHHHHHHHHhcCCceEEEcCCCChH--HHH
Confidence 589999999999998765444433 223 48999999999654311 1223333322256778999999999863 334
Q ss_pred HhhccccccCcccCCceecCcEEEcCCCCeEEEcC-eEEEEEeCccCCCCCCCCCCCHHHH--------HH-HHHhhcCC
Q 008885 83 AASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHG-LSVAYLSGRQSSEGQQFGTYSQDDV--------DA-LRALAEEP 152 (550)
Q Consensus 83 ~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~G-lrIa~lgG~~~~~~~~~~~~te~di--------~~-L~~l~~~~ 152 (550)
.+... .+...+-++...|+. +++++.| ++|+|+||+..++ .+++|+++ +. |..+....
T Consensus 79 ~l~~~-------~~~~~~~p~~~~lh~-~~~~~~g~~~~~GlGGs~~~~----~e~sE~e~~~~~~~~~~~~l~~~~~~~ 146 (224)
T cd07388 79 YLREA-------YNAELVHPEIRNVHE-TFAFWRGPYLVAGVGGEIADE----GEPEEHEALRYPAWVAEYRLKALWELK 146 (224)
T ss_pred HHHHH-------hcccccCccceecCC-CeEEecCCeEEEEecCCcCCC----CCcCHHHHhhhhhhHHHHHHHHHHhCC
Confidence 33210 001112245566775 5667755 8999999998754 45678873 22 22232234
Q ss_pred CCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCC
Q 008885 153 GIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAP 232 (550)
Q Consensus 153 ~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~ 232 (550)
...||||||.||.|+.- .++||.++++++++.+|++++|||.|.-+| ..+.|.+||.|+
T Consensus 147 ~~~~VLv~H~PP~g~g~-------------~h~GS~alr~~I~~~~P~l~i~GHih~~~~--------~~g~t~vvNpg~ 205 (224)
T cd07388 147 DYRKVFLFHTPPYHKGL-------------NEQGSHEVAHLIKTHNPLVVLVGGKGQKHE--------LLGASWVVVPGD 205 (224)
T ss_pred CCCeEEEECCCCCCCCC-------------CccCHHHHHHHHHHhCCCEEEEcCCceeEE--------EeCCEEEECCCc
Confidence 67999999999999821 379999999999999999999999874445 466899999999
Q ss_pred CCC
Q 008885 233 VGN 235 (550)
Q Consensus 233 ~g~ 235 (550)
+..
T Consensus 206 ~~~ 208 (224)
T cd07388 206 LSE 208 (224)
T ss_pred ccC
Confidence 754
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.3e-20 Score=175.76 Aligned_cols=187 Identities=15% Similarity=0.125 Sum_probs=129.5
Q ss_pred EEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHHhh
Q 008885 6 ILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAAS 85 (550)
Q Consensus 6 ILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~l~ 85 (550)
||++||+||++..+.. ..++ ..++|+||++||+............+++ ...++|+|+|+||||.. .....+
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~--~~~~D~vv~~GDl~~~~~~~~~~~~~~l---~~~~~p~~~v~GNHD~~-~~~~~~- 71 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILK--AEEADAVIVAGDITNFGGKEAAVEINLL---LAIGVPVLAVPGNCDTP-EILGLL- 71 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhh--ccCCCEEEECCCccCcCCHHHHHHHHHH---HhcCCCEEEEcCCCCCH-HHHHhh-
Confidence 7999999999987654 2222 3368999999999765433211222444 56789999999999863 222211
Q ss_pred ccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCCCc
Q 008885 86 KNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPS 165 (550)
Q Consensus 86 ~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh~wP~ 165 (550)
.++...+. ..++.++|++|++++|...........+++++++.+..+.......+||+||.||.
T Consensus 72 ---------------~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~ilv~H~pp~ 135 (188)
T cd07392 72 ---------------TSAGLNLH-GKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSDGRLNNLLAKNLILVTHAPPY 135 (188)
T ss_pred ---------------hcCcEecC-CCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHhhhhhccCCCCeEEEECCCCc
Confidence 23444555 35667899999999997654444445778888877633333346789999999998
Q ss_pred cc-cccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcC
Q 008885 166 GV-TNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLA 231 (550)
Q Consensus 166 gi-~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La 231 (550)
+. .+... . ....|+..+.+++++.+|+++||||.|..+.. . ....|++||.|
T Consensus 136 ~~~~d~~~-----~---~~~~g~~~l~~li~~~~~~~~l~GH~H~~~~~---~---~~~~~~~~n~G 188 (188)
T cd07392 136 GTAVDRVS-----G---GFHVGSKAIRKFIEERQPLLCICGHIHESRGV---D---KIGNTLVVNPG 188 (188)
T ss_pred CCcccccC-----C---CCccCCHHHHHHHHHhCCcEEEEeccccccce---e---eeCCeEEecCC
Confidence 84 33211 0 12479999999999999999999998876541 1 35579999976
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-14 Score=139.27 Aligned_cols=200 Identities=18% Similarity=0.236 Sum_probs=119.2
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHH--------------------------HHHh
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEF--------------------------MNYV 57 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~--------------------------~~~l 57 (550)
-|||+++|.+|+++.+-+.+..+..+. .|+|+++||+...... .++| ..++
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~--~D~~v~~G~~~~~~a~-~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff 82 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKG--PDAVVFVGDLLKAEAR-SDEYERAQEEQREPDKSEINEEECYDSEALDKFF 82 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT---SEEEEES-SS-TCHH-HHHHHHHHHTT----THHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccC--CCEEEEeccccccchh-hhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHH
Confidence 489999999999998887777777773 6999999999654211 1112 2444
Q ss_pred cccCCCCccEEEEecCCCChHH-HHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcC-eEEEEEeCccCCCCC---
Q 008885 58 EGRSEIPIPTYFIGDYGVGAAK-VLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHG-LSVAYLSGRQSSEGQ--- 132 (550)
Q Consensus 58 ~g~~~~p~ptyfv~GNhe~~~~-~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~G-lrIa~lgG~~~~~~~--- 132 (550)
.-...+++||++||||+|.|.+ ++..+.. ..-+.+|++.+++ +++.+.| +-|+|+||.......
T Consensus 83 ~~L~~~~~p~~~vPG~~Dap~~~~lr~a~~----------~e~v~p~~~~vH~-sf~~~~g~y~v~G~GGeI~~~~~~~~ 151 (255)
T PF14582_consen 83 RILGELGVPVFVVPGNMDAPERFFLREAYN----------AEIVTPHIHNVHE-SFFFWKGEYLVAGMGGEITDDQREEE 151 (255)
T ss_dssp HHHHCC-SEEEEE--TTS-SHHHHHHHHHH----------CCCC-TTEEE-CT-CEEEETTTEEEEEE-SEEESSS-BCS
T ss_pred HHHHhcCCcEEEecCCCCchHHHHHHHHhc----------cceeccceeeeee-eecccCCcEEEEecCccccCCCcccc
Confidence 4447899999999999998755 3444331 2236799999994 7778887 999999997543221
Q ss_pred CCCCCC-HHHHHHHHHhhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcc
Q 008885 133 QFGTYS-QDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 211 (550)
Q Consensus 133 ~~~~~t-e~di~~L~~l~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~ 211 (550)
..-.|- .+..-.|+.+......--|||+|.+|. + . . + ..++||..+++|++..+|+..+|||.|.--
T Consensus 152 ~~LrYP~weaey~lk~l~elk~~r~IlLfhtpPd-~-~--k------g--~~h~GS~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 152 FKLRYPAWEAEYSLKFLRELKDYRKILLFHTPPD-L-H--K------G--LIHVGSAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp SS-EEEHHHHHHHHGGGGGCTSSEEEEEESS-BT-B-C--T------C--TBTTSBHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred ccccchHHHHHHHHHHHHhcccccEEEEEecCCc-c-C--C------C--cccccHHHHHHHHHhcCCcEEEecccccch
Confidence 111111 121222443333334567999999992 1 1 1 1 147999999999999999999999987655
Q ss_pred ccccccCCCCcceeEEEEcCCCCC
Q 008885 212 AREPYSNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 212 er~Py~~~~~~~~TRFI~La~~g~ 235 (550)
..+ ....|-.||+|.+.-
T Consensus 220 ~~e------~lG~TlVVNPGsL~~ 237 (255)
T PF14582_consen 220 GKE------SLGKTLVVNPGSLAE 237 (255)
T ss_dssp --E------EETTEEEEE--BGGG
T ss_pred hhH------HhCCEEEecCccccc
Confidence 322 467899999999854
|
|
| >PRK10687 purine nucleoside phosphoramidase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-15 Score=135.38 Aligned_cols=100 Identities=19% Similarity=0.173 Sum_probs=79.8
Q ss_pred CCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhhc-----C
Q 008885 389 KECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ-----G 463 (550)
Q Consensus 389 ~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~-----~ 463 (550)
++|.||.+........+|+.++.++++++..|+++||+||||.+|++++.+++++++.++..+.+.+.++.++. |
T Consensus 3 ~~CiFC~I~~g~~p~~~v~edd~~~aflD~~P~~~GH~LViPK~H~~~l~dl~~~~~~~l~~l~~~~~~~~~~~~~~~~g 82 (119)
T PRK10687 3 EETIFSKIIRREIPSDIVYQDELVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDG 82 (119)
T ss_pred CCCchhhhhcCCCCCCEEEECCCEEEEEcCCCCCCccEEEEehhHhCChhHCChHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 47999998644444556789999999999999999999999999999999999999999999888777765432 3
Q ss_pred CceEEEe--ecCCCcCeEEEEEeecCC
Q 008885 464 KEAVFFE--WLSKRGTHANLQAVPIPT 488 (550)
Q Consensus 464 ~~~v~~E--~~~~~~~H~hi~~vPvp~ 488 (550)
+.+++.. ...+.+.|+|+|+||...
T Consensus 83 ~~l~~n~G~~agQ~V~HlHiHvI~g~~ 109 (119)
T PRK10687 83 YRLIMNTNRHGGQEVYHIHMHLLGGRP 109 (119)
T ss_pred eEEEEeCCCcCCcccCEEEEEECCCcc
Confidence 4444433 234457899999999743
|
|
| >COG0537 Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=3e-14 Score=130.25 Aligned_cols=99 Identities=22% Similarity=0.202 Sum_probs=79.5
Q ss_pred CCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHh----hcCCc
Q 008885 390 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK----NQGKE 465 (550)
Q Consensus 390 ~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~----~~~~~ 465 (550)
.|.||.+-..-....+|+.+++++++++..|.++||+||||.+|+.++.+++++++.+|....+.+.+.++ +.|+.
T Consensus 2 ~ciFc~ii~~e~~~~~Vye~~~~~afld~~P~~~gH~LviPk~h~~~l~~l~~~~~~~l~~~~~~ia~al~~~~~~~g~n 81 (138)
T COG0537 2 MCIFCKIIRGEIPANKVYEDEHVLAFLDIYPAAPGHTLVIPKRHVSDLEDLDPEELAELFLLAQKIAKALKEAFGADGYN 81 (138)
T ss_pred CceeeeeecCCCCceEEEeCCCEEEEecCCCCCCCeEEEEeccchhhhhhCCHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 69999864333445788999999999999999999999999999999999999999999877766666554 45666
Q ss_pred eEEEe--ecCCCcCeEEEEEeecCC
Q 008885 466 AVFFE--WLSKRGTHANLQAVPIPT 488 (550)
Q Consensus 466 ~v~~E--~~~~~~~H~hi~~vPvp~ 488 (550)
++.+. ..++-+.|+|+|+||...
T Consensus 82 i~~N~g~~agq~V~HlH~HvIPr~~ 106 (138)
T COG0537 82 IGINNGKAAGQEVFHLHIHIIPRYK 106 (138)
T ss_pred EEEecCcccCcCcceEEEEEcCCcC
Confidence 55543 234457899999999754
|
|
| >cd01275 FHIT FHIT (fragile histidine family): FHIT proteins, related to the HIT family carry a motif HxHxH/Qxx (x, is a hydrophobic amino acid), On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified into three branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.4e-14 Score=125.38 Aligned_cols=99 Identities=23% Similarity=0.268 Sum_probs=77.9
Q ss_pred CcccCCCC-CCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh----cCCc
Q 008885 391 CWFCLSSP-SVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGKE 465 (550)
Q Consensus 391 C~FC~~~~-~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~----~~~~ 465 (550)
|.||.+.. +.+...||+.++.++++++..|..+||+||||.+|++++.+|+++++.+|..+.+.+.+.+++ .++.
T Consensus 1 C~fC~i~~~e~~~~~iv~e~~~~~~~~~~~p~~~gh~lIiPk~H~~~~~~L~~~e~~~l~~~~~~v~~~l~~~~~~~~~n 80 (126)
T cd01275 1 CVFCDIPIKPDEDNLVFYRTKHSFAVVNLYPYNPGHVLVVPYRHVPRLEDLTPEEIADLFKLVQLAMKALKVVYKPDGFN 80 (126)
T ss_pred CccccCccCCCccccEEEeCCCEEEEEcCCCCCCCcEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 99998753 332257899999999999999999999999999999999999999999999888766666554 3444
Q ss_pred eEEEe--ecCCCcCeEEEEEeecCCC
Q 008885 466 AVFFE--WLSKRGTHANLQAVPIPTS 489 (550)
Q Consensus 466 ~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (550)
+++.. ...+...|+|+|+||+...
T Consensus 81 ~~~~~g~~~gq~v~H~HiHiiPR~~~ 106 (126)
T cd01275 81 IGINDGKAGGGIVPHVHIHIVPRWNG 106 (126)
T ss_pred EEEeCCcccCCCcCEEEEEEeCCcCC
Confidence 44333 1233468999999997543
|
Fhit plays a very important role in the development of tumours. Infact, Fhit deletions are among the earliest and most frequent genetic alterations in the development of tumours. |
| >cd01277 HINT_subgroup HINT (histidine triad nucleotide-binding protein) subgroup: Members of this CD belong to the superfamily of histidine triad hydrolases that act on alpha-phosphate of ribonucleotides | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-13 Score=118.68 Aligned_cols=97 Identities=22% Similarity=0.260 Sum_probs=75.9
Q ss_pred CCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh----cCCc
Q 008885 390 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGKE 465 (550)
Q Consensus 390 ~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~----~~~~ 465 (550)
+|.||.....-....+|+.++.+++++|..|..|||++|+|.+|+.++.+++++++.++....+.+.+.+.+ .+++
T Consensus 1 ~C~~c~ii~~e~~~~iv~e~~~~~a~~~~~~~~pg~~lI~Pk~H~~~~~~l~~~e~~~l~~~~~~v~~~l~~~~~~~~~n 80 (103)
T cd01277 1 DCIFCKIIAGEIPSYKVYEDDHVLAFLDINPASKGHTLVIPKKHYENLLDLDPEELAELILAAKKVARALKKALKADGLN 80 (103)
T ss_pred CCccccccCCCCCCCEEEeCCCEEEEECCCCCCCeeEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 599998753322234899999999999999999999999999999999999999988888777666555443 4566
Q ss_pred eEEEe--ecCCCcCeEEEEEeec
Q 008885 466 AVFFE--WLSKRGTHANLQAVPI 486 (550)
Q Consensus 466 ~v~~E--~~~~~~~H~hi~~vPv 486 (550)
.++.+ ...+...|+|+|++|+
T Consensus 81 ~~~~~~~~~g~~~~H~HiHiiPR 103 (103)
T cd01277 81 ILQNNGRAAGQVVFHVHVHVIPR 103 (103)
T ss_pred EEEeCCcccCcccCEEEEEEccC
Confidence 55554 1223468999999995
|
This subgroup includes members from all three forms of cellular life. Although the biochemical function has not been characterised for many of the members of this subgroup, the proteins from Yeast have been shown to be involved in secretion, peroxisome formation and gene expression. |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.3e-12 Score=127.64 Aligned_cols=203 Identities=20% Similarity=0.253 Sum_probs=114.1
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHH---
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKV--- 80 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~--- 80 (550)
.||+++||+||++.... ++.+++ . .+|+||++||+.... .++.+.+ ..++.|+|+|.||||.-...
T Consensus 1 ~rIa~isDiHg~~~~~~--~~~l~~-~-~pD~Vl~~GDi~~~~----~~~~~~l---~~l~~p~~~V~GNHD~~~~~~~~ 69 (238)
T cd07397 1 LRIAIVGDVHGQWDLED--IKALHL-L-QPDLVLFVGDFGNES----VQLVRAI---SSLPLPKAVILGNHDAWYDATFR 69 (238)
T ss_pred CEEEEEecCCCCchHHH--HHHHhc-c-CCCEEEECCCCCcCh----HHHHHHH---HhCCCCeEEEcCCCccccccccc
Confidence 48999999999976532 334433 2 479999999997532 2344444 45678999999999853210
Q ss_pred --HHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCcc-CCCCCCC-------CCC---CHHH-HHHHH
Q 008885 81 --LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQ-SSEGQQF-------GTY---SQDD-VDALR 146 (550)
Q Consensus 81 --l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~-~~~~~~~-------~~~---te~d-i~~L~ 146 (550)
.+.+.. .-+..-+ .++. .+.+++..+.++.+|+.- +.+...+ ..| +-+| ++.+.
T Consensus 70 ~k~~~l~~----------~L~~lg~-~~l~-~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~iv 137 (238)
T cd07397 70 KKGDRVQE----------QLELLGD-LHCG-WGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRII 137 (238)
T ss_pred chHHHHHH----------HHHHhCC-cEEe-ecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHH
Confidence 111110 0001111 1222 133345555555555531 1111100 011 2222 22222
Q ss_pred Hhh--cCCCCccEEEeCCCCcccccccccc----ccccccCCCCCCcHHHHHHHHHhC----CCEEEEccCCCc--cccc
Q 008885 147 ALA--EEPGIVDLFLTNEWPSGVTNKAAAS----DMLVGISDSSNTDSTVSELVAEIK----PRYHIAGSKGVF--YARE 214 (550)
Q Consensus 147 ~l~--~~~~~vDILLTh~wP~gi~~~~~~~----~~~~~~~~~~~Gs~~i~~l~~~lk----PRYhf~Gh~~~f--~er~ 214 (550)
+.+ ......+|||||..|.|..+..... ..+. ...+|++.+++.+..++ |+||++||+|.- |...
T Consensus 138 e~~~~~~~~~~~VliaH~~~~G~g~~~~~~cg~d~~~~---~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~l~~~~~ 214 (238)
T cd07397 138 AAAKKAPPDLPLILLAHNGPSGLGSDAEDPCGRDWKPP---GGDWGDPDLALAISQIQQGRQVPLVVFGHMHHRLRRGKG 214 (238)
T ss_pred HHhhhcCCCCCeEEEeCcCCcCCCcccccccccccCCc---CCCCCCHHHHHHHHHHhccCCCCEEEeCCccCccccccc
Confidence 222 2345679999999999997543320 1121 24689999999888877 999999997643 3221
Q ss_pred cccCC--CCcceeEEEEcCCC
Q 008885 215 PYSNV--DAVHVTRFLGLAPV 233 (550)
Q Consensus 215 Py~~~--~~~~~TRFI~La~~ 233 (550)
+|.. .....|.|+|.|.+
T Consensus 215 -~r~~~~~~~~gt~y~N~a~~ 234 (238)
T cd07397 215 -LRNMIAVDREGTVYLNAASV 234 (238)
T ss_pred -ccceeeecCCCeEEEecccc
Confidence 2110 13457999998876
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.4e-12 Score=116.96 Aligned_cols=133 Identities=20% Similarity=0.300 Sum_probs=93.6
Q ss_pred EEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhcccCCCCcc-EEEEecCCCChHHHHH
Q 008885 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGRSEIPIP-TYFIGDYGVGAAKVLL 82 (550)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~-~~~~~~~~~l~g~~~~p~p-tyfv~GNhe~~~~~l~ 82 (550)
||++++|+||++. .+ ...+.|+||++||++.... ...+.+.+++ .+.+.+ +++|+||||..
T Consensus 1 ~i~~isD~H~~~~-------~~--~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l---~~~~~~~~~~v~GNHD~~----- 63 (135)
T cd07379 1 RFVCISDTHSRHR-------TI--SIPDGDVLIHAGDLTERGTLEELQKFLDWL---KSLPHPHKIVIAGNHDLT----- 63 (135)
T ss_pred CEEEEeCCCCCCC-------cC--cCCCCCEEEECCCCCCCCCHHHHHHHHHHH---HhCCCCeEEEEECCCCCc-----
Confidence 6999999999976 11 1235899999999975432 2233455665 344445 58999999731
Q ss_pred HhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCC
Q 008885 83 AASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNE 162 (550)
Q Consensus 83 ~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh~ 162 (550)
. . ..+.+||+||.
T Consensus 64 --------------~----~-------------------------------------------------~~~~~ilv~H~ 76 (135)
T cd07379 64 --------------L----D-------------------------------------------------PEDTDILVTHG 76 (135)
T ss_pred --------------C----C-------------------------------------------------CCCCEEEEECC
Confidence 0 0 03579999999
Q ss_pred CCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcC
Q 008885 163 WPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLA 231 (550)
Q Consensus 163 wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La 231 (550)
+|.++.+.... ....|+..+.+++...+|+++|+||.|..+... .+ .+....|.+||.|
T Consensus 77 ~p~~~~~~~~~--------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~-~~-~~~~~~t~~in~~ 135 (135)
T cd07379 77 PPYGHLDLVSS--------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE-RV-LDTDGETLFVNAS 135 (135)
T ss_pred CCCcCcccccc--------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee-Ee-cccCCCEEEEeCC
Confidence 99987543221 136899999999999999999999988765322 22 2245689999975
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd01276 PKCI_related Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.8e-13 Score=114.15 Aligned_cols=96 Identities=21% Similarity=0.211 Sum_probs=72.0
Q ss_pred CCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhhc-----CC
Q 008885 390 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ-----GK 464 (550)
Q Consensus 390 ~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~-----~~ 464 (550)
+|.||.+...-....||+.++.+++++|..|..+||+||||.+|++++.+|+++.+.++..+.+.++++.+.. ++
T Consensus 1 ~C~fc~i~~~e~~~~iv~e~~~~~a~~~~~p~~~gh~lIiPk~H~~~~~dl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (104)
T cd01276 1 DCIFCKIIRGEIPAKKVYEDDEVLAFHDINPQAPVHILVIPKKHIASLSDATEEDEELLGHLLSAAAKVAKDLGIAEDGY 80 (104)
T ss_pred CCcceecccCCCccCEEEECCCEEEEECCCCCCCCEEEEEecceeCChHHcccccHHHHHHHHHHHHHHHHHhCCCCCCE
Confidence 4999987543223568899999999999999999999999999999999998877777777666665444432 34
Q ss_pred ceEEEe--ecCCCcCeEEEEEee
Q 008885 465 EAVFFE--WLSKRGTHANLQAVP 485 (550)
Q Consensus 465 ~~v~~E--~~~~~~~H~hi~~vP 485 (550)
++++.. ...+...|+|+|+|+
T Consensus 81 n~~~~~g~~~g~~v~H~HiHii~ 103 (104)
T cd01276 81 RLVINCGKDGGQEVFHLHLHLLG 103 (104)
T ss_pred EEEEeCCCCCCCceeEEEEEEeC
Confidence 433333 122346799999997
|
The members of this subgroup have a conserved HxHxHxx motif (x is a hydrophobic residue) that is a signature for this family. No enzymatic activity has been reported however, for PKCI and its related members. |
| >PF01230 HIT: HIT domain; InterPro: IPR001310 The Histidine Triad (HIT) motif, His-x-His-x-His-x-x (x, a hydrophobic amino acid) was identified as being highly conserved in a variety of organisms [] | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.8e-12 Score=109.41 Aligned_cols=85 Identities=21% Similarity=0.286 Sum_probs=68.5
Q ss_pred ceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh----cCCceEEEe--ecCCCc
Q 008885 403 HLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGKEAVFFE--WLSKRG 476 (550)
Q Consensus 403 hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~----~~~~~v~~E--~~~~~~ 476 (550)
..+|+.++.++++++..|.++||+||||.+|+.++.+|+++++.+|....+.+.+.+++ .|++++... ...+.+
T Consensus 6 ~~vv~e~~~~~~~~~~~p~~~gh~LVipk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~~g~~~gq~v 85 (98)
T PF01230_consen 6 ARVVYEDDHFVAFLDIFPISPGHLLVIPKRHVESLSDLPPEERAELMQLVQKVAKALKEAFGPDGYNVIINNGPAAGQSV 85 (98)
T ss_dssp CEEEEE-SSEEEEEESSTSSTTEEEEEESSTGSSGGGSHHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESGGGTSSS
T ss_pred eeEEEECCCEEEEEcCCCCCCeEEEEEecccccchhcCCHHHHHHHHHHHHHHHHHHhcccccceeeccccchhhhcCcc
Confidence 46889999999999999999999999999999999999999999999888887777664 344444433 233457
Q ss_pred CeEEEEEeecC
Q 008885 477 THANLQAVPIP 487 (550)
Q Consensus 477 ~H~hi~~vPvp 487 (550)
+|+|+|+||+.
T Consensus 86 ~HlH~HviPR~ 96 (98)
T PF01230_consen 86 PHLHFHVIPRY 96 (98)
T ss_dssp SS-EEEEEEES
T ss_pred CEEEEEEeccc
Confidence 89999999974
|
Crystal structure of rabbit Hint, purified as an adenosine and AMP-binding protein, showed that proteins in the HIT superfamily are conserved as nucleotide-binding proteins and that Hint homologues, which are found in all forms of life, are structurally related to Fhit homologues and GalT-related enzymes, which have more restricted phylogenetic profiles []. Hint homologues including rabbit Hint and yeast Hnt1 hydrolyse adenosine 5' monophosphoramide substrates such as AMP-NH2 and AMP-lysine to AMP plus the amine product and function as positive regulators of Cdk7/Kin28 in vivo []. Fhit homologues are diadenosine polyphosphate hydrolases [] and function as tumour suppressors in human and mouse [] though the tumour suppressing function of Fhit does not depend on ApppA hydrolysis []. The third branch of the HIT superfamily, which includes GalT homologues, contains a related His-X-His-X-Gln motif and transfers nucleoside monophosphate moieties to phosphorylated second substrates rather than hydrolysing them [].; PDB: 3LB5_B 1EMS_A 1Y23_A 3ANO_B 1KPE_B 1KPC_A 4EQE_B 1KPA_A 1KPB_B 4EQG_B .... |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.1e-11 Score=121.61 Aligned_cols=200 Identities=12% Similarity=0.006 Sum_probs=111.7
Q ss_pred EEEEEcCCCCChHH-----HHH-HHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChH
Q 008885 5 RILLCGDVLGRLNQ-----LFK-RVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAA 78 (550)
Q Consensus 5 KILv~GDvhG~~~~-----l~~-kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~ 78 (550)
||++++|+|.++.. .++ .++.+++. ++|+||++||++.........+..+. ....+|+|+|+||||...
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~--~~d~vv~~GDl~~~~~~~~~~~~~l~---~~~~~pv~~v~GNHD~~~ 75 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQ--KIDHLHIAGDISNDFQRSLPFIEKLQ---ELKGIKVTFNAGNHDMLK 75 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhc--CCCEEEECCccccchhhHHHHHHHHH---HhcCCcEEEECCCCCCCC
Confidence 69999999975321 122 23333332 48999999999864322222222222 114589999999998521
Q ss_pred H-HHHHhhccccccCcccCCceecCcEEEcCCCCeE-EEcCeEEEEEeCccCCCC--------------------CCCCC
Q 008885 79 K-VLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF-TLHGLSVAYLSGRQSSEG--------------------QQFGT 136 (550)
Q Consensus 79 ~-~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~-~i~GlrIa~lgG~~~~~~--------------------~~~~~ 136 (550)
. ....+.. . . +..+|.+..+. +.++++|.|+.|-...+. ...+.
T Consensus 76 ~~~~~~~~~----------~--~--~~~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 141 (239)
T TIGR03729 76 DLTYEEIES----------N--D--SPLYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKRP 141 (239)
T ss_pred CCCHHHHHh----------c--c--chhhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCCC
Confidence 1 1111210 0 0 34456544432 237899999997432110 00111
Q ss_pred C-----CHHHHHHHHH-hhcCCCCccEEEeCCCCccccc--cccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC
Q 008885 137 Y-----SQDDVDALRA-LAEEPGIVDLFLTNEWPSGVTN--KAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG 208 (550)
Q Consensus 137 ~-----te~di~~L~~-l~~~~~~vDILLTh~wP~gi~~--~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~ 208 (550)
. .+++.+.|++ +++...+.-||+||-+|..... ........ .. ....|+..+.+++++.+|++||+||.|
T Consensus 142 ~~~~~~~~~~l~~l~~~l~~~~~~~~ivvtH~pP~~~~~~~~~~~~~~~-~~-~~~~~s~~l~~li~~~~v~~~i~GH~H 219 (239)
T TIGR03729 142 MSDPERTAIVLKQLKKQLNQLDNKQVIFVTHFVPHRDFIYVPMDHRRFD-MF-NAFLGSQHFGQLLVKYEIKDVIFGHLH 219 (239)
T ss_pred CChHHHHHHHHHHHHHHHHhcCCCCEEEEEcccchHHHhcCCCCCcchh-hh-hhccChHHHHHHHHHhCCCEEEECCcc
Confidence 1 2233344443 2223345689999999965311 00000000 00 125689999999999999999999988
Q ss_pred CccccccccCCCCcceeEEEEcC
Q 008885 209 VFYAREPYSNVDAVHVTRFLGLA 231 (550)
Q Consensus 209 ~f~er~Py~~~~~~~~TRFI~La 231 (550)
..+... ..+.||+++-+
T Consensus 220 ~~~~~~------~i~~~~~~~~~ 236 (239)
T TIGR03729 220 RRFGPL------TIGGTTYHNRP 236 (239)
T ss_pred CCCCCE------EECCEEEEecC
Confidence 655321 34689999754
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-11 Score=121.34 Aligned_cols=204 Identities=16% Similarity=0.155 Sum_probs=128.4
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCC-ChhhHHHHHHHhcccCCCCcc-EEEEecCCCChHHH-
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPD-SSELLDEFMNYVEGRSEIPIP-TYFIGDYGVGAAKV- 80 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~-~~~~~~~~~~~l~g~~~~p~p-tyfv~GNhe~~~~~- 80 (550)
.++.+++|.|+....+ + +..+-|++|.+|||-.. ..++...+.+++ -++|.- -+.|.||||+..+-
T Consensus 62 ~r~VcisdtH~~~~~i-------~-~~p~gDvlihagdfT~~g~~~ev~~fn~~~---gslph~yKIVIaGNHELtFd~e 130 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDI-------N-DIPDGDVLIHAGDFTNLGLPEEVIKFNEWL---GSLPHEYKIVIAGNHELTFDHE 130 (305)
T ss_pred eEEEEecCcccccCcc-------c-cCCCCceEEeccCCccccCHHHHHhhhHHh---ccCcceeeEEEeeccceeeccc
Confidence 6899999999976552 2 23345999999999653 334455566665 344444 68899999987541
Q ss_pred -HHHh-h--cccccc------Cc-ccCC-ceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHh
Q 008885 81 -LLAA-S--KNSANQ------GF-KMDG-FKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRAL 148 (550)
Q Consensus 81 -l~~l-~--~~~~~~------~~-~~~g-~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l 148 (550)
...+ . .++..+ +. ..++ ..+-.|.+||.+..+ ++.|++|.+..-. +....|.++...--..|.++
T Consensus 131 f~~~~~k~~~~~~~~p~~s~l~P~a~egv~~lLTN~iYLqD~~v-tv~G~~Iygspw~--p~~~g~~f~l~rg~~~ld~W 207 (305)
T KOG3947|consen 131 FMADLIKDEQDAYYFPGVSKLKPEAYEGVQSLLTNCIYLQDSEV-TVRGVRIYGSPWT--PLLPGWAFNLPRGQSLLDKW 207 (305)
T ss_pred ccchhhccccceecCccccccCccccccccchhceeEEEecCcE-EEEEEEEecCCCC--cccCchhhhhhhhHhhhHHH
Confidence 1100 0 000000 00 0111 236678999998775 7889888854433 21222333332222234445
Q ss_pred hcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHH-HhCCCEEEEccCCCccccccccCCCCcceeEE
Q 008885 149 AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVA-EIKPRYHIAGSKGVFYAREPYSNVDAVHVTRF 227 (550)
Q Consensus 149 ~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~-~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRF 227 (550)
.....++|||+||.+|.|..+... ..+..+.|+..+-.-++ .+||+||++||.|..|--. +.+.|+|
T Consensus 208 ~~ip~~iDvL~tHtPPlG~gd~~~------~~~gqr~GC~ell~tVe~rvqpk~hVfGhvhe~~Gvt------a~G~t~f 275 (305)
T KOG3947|consen 208 NQIPGGIDVLITHTPPLGHGDLVP------VFSGQRNGCVELLNTVERRVQPKYHVFGHVHEGHGVT------ADGYTTF 275 (305)
T ss_pred hcCccccceeccCCCCCCcchhcc------cccCcccCHHHHHHhHhhccccceEEeeeeecCceee------ecCcccc
Confidence 556789999999999999866432 11125789887666555 4999999999987766643 5678999
Q ss_pred EEcCCC
Q 008885 228 LGLAPV 233 (550)
Q Consensus 228 I~La~~ 233 (550)
||-+-+
T Consensus 276 ina~~C 281 (305)
T KOG3947|consen 276 INAELC 281 (305)
T ss_pred ccHHHh
Confidence 987765
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.8e-10 Score=114.34 Aligned_cols=197 Identities=16% Similarity=0.123 Sum_probs=121.7
Q ss_pred EEEEEcCCCCC------------hHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhcccCCCCccEEEEe
Q 008885 5 RILLCGDVLGR------------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGRSEIPIPTYFIG 71 (550)
Q Consensus 5 KILv~GDvhG~------------~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~-~~~~~~~~~l~g~~~~p~ptyfv~ 71 (550)
||++++|+|=. ...+-+.++.+++...++|+||++||++.... ..-+.+.+.+ .++++|+|+|+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l---~~~~~p~~~v~ 77 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELL---AALPIPVYLLP 77 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHH---hhcCCCEEEeC
Confidence 69999999943 22333334555554346899999999976532 2223455555 45689999999
Q ss_pred cCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhh-c
Q 008885 72 DYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALA-E 150 (550)
Q Consensus 72 GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~-~ 150 (550)
||||....+...+.. .. ..+ .+. .-.+.++|++|.++....... ....+++++++.|++.. .
T Consensus 78 GNHD~~~~~~~~~~~---------~~---~~~-~~~--~~~~~~~~~~~i~lds~~~~~--~~~~~~~~ql~wL~~~L~~ 140 (240)
T cd07402 78 GNHDDRAAMRAVFPE---------LP---PAP-GFV--QYVVDLGGWRLILLDSSVPGQ--HGGELCAAQLDWLEAALAE 140 (240)
T ss_pred CCCCCHHHHHHhhcc---------cc---ccc-ccc--ceeEecCCEEEEEEeCCCCCC--cCCEECHHHHHHHHHHHHh
Confidence 999964333332210 00 000 000 124467899999997654321 22345677777666532 2
Q ss_pred CCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeEEEE
Q 008885 151 EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLG 229 (550)
Q Consensus 151 ~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~ 229 (550)
.....-|+++|.+|........ .. .....+..+.+++.+. +++++|+||.|..+.+ ....+++++
T Consensus 141 ~~~~~~il~~H~pp~~~~~~~~-----~~--~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~-------~~~g~~~~~ 206 (240)
T cd07402 141 APDKPTLVFLHHPPFPVGIAWM-----DA--IGLRNAEALAAVLARHPNVRAILCGHVHRPIDG-------SWGGIPLLT 206 (240)
T ss_pred CCCCCEEEEECCCCccCCchhh-----hh--hhCCCHHHHHHHHhcCCCeeEEEECCcCchHHe-------EECCEEEEE
Confidence 2345679999999987632100 00 0134678888999988 8999999998875442 234588888
Q ss_pred cCCCCC
Q 008885 230 LAPVGN 235 (550)
Q Consensus 230 La~~g~ 235 (550)
.+..+.
T Consensus 207 ~gs~~~ 212 (240)
T cd07402 207 APSTCH 212 (240)
T ss_pred cCccee
Confidence 887764
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd01278 aprataxin_related aprataxin related: Aprataxin, a HINT family hydrolase is mutated in ataxia oculomotor apraxia syndrome | Back alignment and domain information |
|---|
Probab=99.29 E-value=2e-11 Score=105.99 Aligned_cols=95 Identities=18% Similarity=0.116 Sum_probs=72.5
Q ss_pred CCcccCCCCC-C-CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhhc-----
Q 008885 390 ECWFCLSSPS-V-ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ----- 462 (550)
Q Consensus 390 ~C~FC~~~~~-~-~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~----- 462 (550)
.|.||.+... . .+..||+.++.+++++|..|..+||+||||.+|++++.+++++.++++..+.+.+.+.+.+.
T Consensus 1 ~c~fc~i~~~e~~~~~~iv~~~~~~~a~~~~~p~~~~h~lIiPk~h~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~ 80 (104)
T cd01278 1 LCHFCDIAKRRDPDPEDQVYEDDRVVVFKDIYPKARHHYLVIPKEHIASLKALTKEDVPLLEHMETVGREKLLRSDNTDP 80 (104)
T ss_pred CCccccCccCCCCCCccEEEeCCCEEEEECCCCCCCceEEEEecCCCCChHHCCHhHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 4999987532 2 24678999999999999999999999999999999999999999999999888777744331
Q ss_pred -CCceEEEeecCCCcCeEEEEEe
Q 008885 463 -GKEAVFFEWLSKRGTHANLQAV 484 (550)
Q Consensus 463 -~~~~v~~E~~~~~~~H~hi~~v 484 (550)
|+++.+.....+...|+|+|+|
T Consensus 81 ~~~n~g~h~~p~~~v~H~H~Hvi 103 (104)
T cd01278 81 SEFRFGFHAPPFTSVSHLHLHVI 103 (104)
T ss_pred cCeEEEeCCCCCcCeeeEEEEee
Confidence 2222111111124679999997
|
All the members of this subgroup have the conserved HxHxHxx (where x is a hydrophobic residue) signature motif. Members of this subgroup are predominantly eukaryotic in origin. |
| >cd00468 HIT_like HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.9e-11 Score=99.45 Aligned_cols=80 Identities=18% Similarity=0.175 Sum_probs=63.6
Q ss_pred EEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCC---ceEEEe--ecCCCcCeE
Q 008885 406 VSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGK---EAVFFE--WLSKRGTHA 479 (550)
Q Consensus 406 is~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~~~---~~v~~E--~~~~~~~H~ 479 (550)
|+.++.+++++|..|..+||+||||.+|+.++.+++++++.++....+.+.+.+++ .+. ++++.. ...+...|+
T Consensus 1 ~~e~~~~~a~~~~~p~~~gh~lIipk~H~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~n~g~~~g~~v~H~ 80 (86)
T cd00468 1 VPDDEHSFAFVNLKPAAPGHVLVCPKRHVETLPDLDEALLADLVITAQRVAAELEKHGNVPSLTVFVNDGAAAGQSVPHV 80 (86)
T ss_pred CeecCcEEEEECCCCCCCCcEEEeCchhhCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCccCCCcCCEE
Confidence 46789999999999999999999999999999999999999999888877776653 232 322222 122346899
Q ss_pred EEEEee
Q 008885 480 NLQAVP 485 (550)
Q Consensus 480 hi~~vP 485 (550)
|+|+||
T Consensus 81 H~hiiP 86 (86)
T cd00468 81 HLHVLP 86 (86)
T ss_pred EEEeCC
Confidence 999998
|
On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified in the literacture into three major branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases. Further sequence analysis reveals several new closely related, yet uncharacterized subgroups. |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.8e-11 Score=107.32 Aligned_cols=192 Identities=12% Similarity=0.101 Sum_probs=97.8
Q ss_pred CEEEEEcCCCCChHHH---HHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHH--hcccCCCCccEEEEecCCCChH
Q 008885 4 PRILLCGDVLGRLNQL---FKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNY--VEGRSEIPIPTYFIGDYGVGAA 78 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l---~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~--l~g~~~~p~ptyfv~GNhe~~~ 78 (550)
|||+++||+|+..... ...+.....+. +.|+||++||++............. .......++|+|++.||||...
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~-~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~ 79 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAEN-KPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYS 79 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHT-TTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccC-CCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccce
Confidence 6999999999998876 44444444444 5799999999976543322222111 1112557799999999999764
Q ss_pred HHHHHhhccccccCcccCCceecCcEEEcCCCC-eEE-EcCeEEEEEeCccCCCCCCCCCCCHHHHH-HHHHhhcCCCCc
Q 008885 79 KVLLAASKNSANQGFKMDGFKVTDNLFWLKGSG-NFT-LHGLSVAYLSGRQSSEGQQFGTYSQDDVD-ALRALAEEPGIV 155 (550)
Q Consensus 79 ~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~g-v~~-i~GlrIa~lgG~~~~~~~~~~~~te~di~-~L~~l~~~~~~v 155 (550)
........... ........+..+..... ... .............. ... ......... ....+.......
T Consensus 80 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~ 151 (200)
T PF00149_consen 80 GNSFYGFYDYQ-----FEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYP-DYG--MEAQQEWWLWLLLLLEAKNDDP 151 (200)
T ss_dssp HHHHHHHHHHH-----HSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTH-HSE--HHHHHHHHHHHHHHHHEEEESE
T ss_pred ecccccccccc-----ccccccccccccccCcceeeeccccccccccccccc-ccc--cccchhcccccccccccccccc
Confidence 32221110000 00001111111111011 111 11111111111000 000 000000011 111122234568
Q ss_pred cEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCc
Q 008885 156 DLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVF 210 (550)
Q Consensus 156 DILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f 210 (550)
.|+++|.+|.......... .....+...+..+.+..+++++|+||.|.|
T Consensus 152 ~iv~~H~p~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 152 VIVFTHHPPYSSSSDSSSY------GNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp EEEEESSSSSTTSSSTHHH------SSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred eeEEEecCCCCcccccccc------chhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 8999999999875422100 001356788999999999999999999864
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >KOG3275 consensus Zinc-binding protein of the histidine triad (HIT) family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.7e-11 Score=100.96 Aligned_cols=97 Identities=16% Similarity=0.155 Sum_probs=79.7
Q ss_pred CCCCcccCCCC-CCCcceEEEECCEEEEEecCCCCCCCeEEEEeccc---cCCCCCCCHHHHHHHHHHHHHHHHHHh-hc
Q 008885 388 SKECWFCLSSP-SVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEH---VPNTISTSPECEKELGRFQNSLMMYYK-NQ 462 (550)
Q Consensus 388 ~~~C~FC~~~~-~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H---~~s~~~l~~~~~~Ei~~~~~~L~~~~~-~~ 462 (550)
...|.||.+-. +++ .-||++++.|+++.+..|..|||.||||..| .+...+.+++....++-..+.+.+.+. ..
T Consensus 15 ~~~tIF~kIi~keIP-a~ii~Edd~~lAF~Di~Pqap~HfLvIPK~hi~~~s~aed~~~e~Lg~ll~~~k~vak~~Gl~~ 93 (127)
T KOG3275|consen 15 AAPTIFCKIIRKEIP-AKIIFEDDRCLAFHDIAPQAPGHFLVIPKKHITQLSKAEDRDDELLGHLLPVAKKVAKALGLED 93 (127)
T ss_pred CCCcEeeeeecccCC-cceEeeccceEEEEecCCCCCceEEEeecccccchhhcccCCHHHHHHHHHHHHHHHHHhCccc
Confidence 46899998764 344 3588999999999999999999999999999 555667788999999988888888777 56
Q ss_pred CCceEEEe-e-cCCCcCeEEEEEee
Q 008885 463 GKEAVFFE-W-LSKRGTHANLQAVP 485 (550)
Q Consensus 463 ~~~~v~~E-~-~~~~~~H~hi~~vP 485 (550)
|+.+|..+ . ..+.+.|+|+|++|
T Consensus 94 gYrvv~NnG~~g~QsV~HvH~Hvlg 118 (127)
T KOG3275|consen 94 GYRVVQNNGKDGHQSVYHVHLHVLG 118 (127)
T ss_pred ceeEEEcCCcccceEEEEEEEEEeC
Confidence 78888776 2 23447899999999
|
|
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.1e-09 Score=104.16 Aligned_cols=177 Identities=12% Similarity=0.104 Sum_probs=100.9
Q ss_pred EEEEcCCCCC---------hH----HHHHHHHHH-hhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhcccCCCCccEEEE
Q 008885 6 ILLCGDVLGR---------LN----QLFKRVQSV-NKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGRSEIPIPTYFI 70 (550)
Q Consensus 6 ILv~GDvhG~---------~~----~l~~kv~~l-~~k~GpfD~li~~GDff~~~~-~~~~~~~~~l~g~~~~p~ptyfv 70 (550)
|.+++|.|-. +. ++.+++.+. ++-..+.|+||++||+..... .......+++ ...+.|+|+|
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l---~~l~~~v~~V 77 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWI---DALPGTKVLL 77 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHH---HhCCCCeEEE
Confidence 5789999965 22 333333333 222236899999999974321 1122333444 4456789999
Q ss_pred ecCCCCh----HHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeC-ccCCCCC-----C-C----C
Q 008885 71 GDYGVGA----AKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSG-RQSSEGQ-----Q-F----G 135 (550)
Q Consensus 71 ~GNhe~~----~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG-~~~~~~~-----~-~----~ 135 (550)
+||||-. ..+.+.+. ++.+++.....+.+++++|+|+.+ +.+.... + . .
T Consensus 78 ~GNHD~~~~~~~~~~~~l~----------------~~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
T cd07393 78 KGNHDYWWGSASKLRKALE----------------ESRLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDE 141 (232)
T ss_pred eCCccccCCCHHHHHHHHH----------------hcCeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHH
Confidence 9999841 22222222 222222223455688999998864 2221110 0 0 0
Q ss_pred CCCHHHHHHHHH----hhcC-CCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCc
Q 008885 136 TYSQDDVDALRA----LAEE-PGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVF 210 (550)
Q Consensus 136 ~~te~di~~L~~----l~~~-~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f 210 (550)
.+..++...|.. .... ..+.-|+++|.+|.... .++..+.+++++..+++.|+||.|.+
T Consensus 142 ~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~----------------~~~~~~~~~~~~~~v~~vl~GH~H~~ 205 (232)
T cd07393 142 KIFERELERLELSLKAAKKREKEKIKIVMLHYPPANEN----------------GDDSPISKLIEEYGVDICVYGHLHGV 205 (232)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCC----------------CCHHHHHHHHHHcCCCEEEECCCCCC
Confidence 112233333332 1111 12367999999986541 23456778888889999999999988
Q ss_pred ccccccc
Q 008885 211 YAREPYS 217 (550)
Q Consensus 211 ~er~Py~ 217 (550)
....||.
T Consensus 206 ~~~~~~~ 212 (232)
T cd07393 206 GRDRAIN 212 (232)
T ss_pred ccccccc
Confidence 7777774
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.08 E-value=9.5e-10 Score=101.26 Aligned_cols=141 Identities=16% Similarity=0.241 Sum_probs=88.6
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHH
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLA 83 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~ 83 (550)
|||+++||+|++.+.+-+.++.+ + ..|+||++||++.. .++.+.+. ++ |+++|.||||... +..
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~---~-~~d~vi~~GDi~~~-----~~~~~~~~---~~--~~~~v~GNHD~~~--~~~ 64 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI---N-EPDFVIILGDIFDP-----EEVLELLR---DI--PVYVVRGNHDNWA--FPN 64 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH---T-TESEEEEES-SCSH-----HHHHHHHH---HH--EEEEE--CCHSTH--HHS
T ss_pred CEEEEEeCCCCChhHHHHHHHHh---c-CCCEEEECCCchhH-----HHHHHHHh---cC--CEEEEeCCccccc--chh
Confidence 89999999999998765555555 2 37999999999872 44555553 22 8999999998532 111
Q ss_pred hhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCC
Q 008885 84 ASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEW 163 (550)
Q Consensus 84 l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh~w 163 (550)
.. ..+. +...-..++ .+..|+++|.-
T Consensus 65 ~~-----------~~~~------~~~~~~~~~-------------------------------------~~~~i~~~H~~ 90 (156)
T PF12850_consen 65 EN-----------DEEY------LLDALRLTI-------------------------------------DGFKILLSHGH 90 (156)
T ss_dssp EE-----------CTCS------SHSEEEEEE-------------------------------------TTEEEEEESST
T ss_pred hh-----------hccc------cccceeeee-------------------------------------cCCeEEEECCC
Confidence 00 0001 000001111 24678888887
Q ss_pred CccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCCcc
Q 008885 164 PSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKE 237 (550)
Q Consensus 164 P~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~~~ 237 (550)
|..+. .+...+.+++...+++++|+||.|..+... ...+.++++|.++...
T Consensus 91 ~~~~~----------------~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-------~~~~~~~~~Gs~~~~~ 141 (156)
T PF12850_consen 91 PYDVQ----------------WDPAELREILSRENVDLVLHGHTHRPQVFK-------IGGIHVINPGSIGGPR 141 (156)
T ss_dssp SSSST----------------TTHHHHHHHHHHTTSSEEEESSSSSEEEEE-------ETTEEEEEE-GSSS-S
T ss_pred Ccccc----------------cChhhhhhhhcccCCCEEEcCCcccceEEE-------ECCEEEEECCcCCCCC
Confidence 76642 345567788889999999999998866642 3469999999998643
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.4e-09 Score=102.08 Aligned_cols=151 Identities=9% Similarity=0.027 Sum_probs=86.3
Q ss_pred EEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHHhh
Q 008885 6 ILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAAS 85 (550)
Q Consensus 6 ILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~l~ 85 (550)
|++++|+|+++......+.+.. ...++|+|+++||++...... .+..++ .....+.|+|+|+||||.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~-~~~~~d~li~~GDi~~~~~~~--~~~~~~-~~~~~~~~v~~v~GNHD~--------- 67 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFP-IAPDADILVLAGDIGYLTDAP--RFAPLL-LALKGFEPVIYVPGNHEF--------- 67 (166)
T ss_pred CceEccccccCccccccccccC-CCCCCCEEEECCCCCCCcchH--HHHHHH-HhhcCCccEEEeCCCcce---------
Confidence 5789999999865433321111 223689999999998643221 111111 124567899999999962
Q ss_pred ccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCCCc
Q 008885 86 KNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPS 165 (550)
Q Consensus 86 ~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh~wP~ 165 (550)
+ ++|.|.++-.. ...++++. +........+..|++||-+|.
T Consensus 68 --------------------~-----------~~~~G~~~w~~-----~~~~~~~~---~~~~~~d~~~~~vv~~HhpP~ 108 (166)
T cd07404 68 --------------------Y-----------VRIIGTTLWSD-----ISLFGEAA---ARMRMNDFRGKTVVVTHHAPS 108 (166)
T ss_pred --------------------E-----------EEEEeeecccc-----cCccchHH---HHhCCCCCCCCEEEEeCCCCC
Confidence 0 33444332111 11222332 222222334678999999998
Q ss_pred cccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccc
Q 008885 166 GVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYA 212 (550)
Q Consensus 166 gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~e 212 (550)
........ ..... ...++..+.++++..+++++||||.|.-+.
T Consensus 109 ~~~~~~~~---~~~~~-~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 109 PLSLAPQY---GDSLV-NAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred ccccCccc---cCCCc-chhhhhccHhHHhhcCCCEEEECCccccce
Confidence 75321100 00100 113455677888888999999999886544
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.8e-09 Score=98.57 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=43.7
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
|||++++|+||+...+-..++.+. .....|.||++||++.. ++.+++ .+...|+++|.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~-~~~~~d~ii~~GD~~~~------~~~~~l---~~~~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFN-LESNVDLVIHAGDLTSP------FVLKEF---EDLAAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHh-hccCCCEEEEcCCCCCH------HHHHHH---HHhCCceEEEccCCCc
Confidence 799999999999865433233333 33258999999999841 233343 3345689999999985
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.7e-09 Score=96.52 Aligned_cols=68 Identities=18% Similarity=0.290 Sum_probs=49.8
Q ss_pred ccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCC
Q 008885 155 VDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPV 233 (550)
Q Consensus 155 vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~ 233 (550)
++||++|.||.++..... ....|+..+.+++.+.+|+++|+||.|..+...- + ......|++||.+-+
T Consensus 57 ~~Ilv~H~pp~~~~~~~~---------~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~~-~-~~~~~~t~~~n~~~~ 124 (129)
T cd07403 57 VDILLTHAPPAGIGDGED---------FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQL-R-IRRVGDTTVINAYGY 124 (129)
T ss_pred cCEEEECCCCCcCcCccc---------ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCccc-c-ccccCCEEEEeCCcE
Confidence 489999999988753211 1357899999999999999999999886554210 0 014678999998754
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.3e-08 Score=100.73 Aligned_cols=195 Identities=15% Similarity=0.153 Sum_probs=107.0
Q ss_pred CCEEEEEcCCC-CC-----------hHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhcccCCCCccEEE
Q 008885 3 PPRILLCGDVL-GR-----------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGRSEIPIPTYF 69 (550)
Q Consensus 3 ~~KILv~GDvh-G~-----------~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~-~~~~~~~~~l~g~~~~p~ptyf 69 (550)
+|||+.++|+| .. .+.+-+.++.+++...+.|+||++||+....+ +.-+.+.+.+ .++++|+|+
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~~~~~~~~~~~l---~~l~~Pv~~ 90 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHSSEAYQHFAEGI---APLRKPCVW 90 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCCHHHHHHHHHHH---hhcCCcEEE
Confidence 68999999999 11 12233334555544346899999999976432 2222344444 567899999
Q ss_pred EecCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhh
Q 008885 70 IGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALA 149 (550)
Q Consensus 70 v~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~ 149 (550)
++||||....+.+.+... + +.++ ..++..++.+|..|..... ....+.+.+++++-|++..
T Consensus 91 v~GNHD~~~~~~~~~~~~---------~--~~~~------~~~~~~~~~~~i~Lds~~~--g~~~G~l~~~ql~wL~~~L 151 (275)
T PRK11148 91 LPGNHDFQPAMYSALQDA---------G--ISPA------KHVLIGEHWQILLLDSQVF--GVPHGELSEYQLEWLERKL 151 (275)
T ss_pred eCCCCCChHHHHHHHhhc---------C--CCcc------ceEEecCCEEEEEecCCCC--CCcCCEeCHHHHHHHHHHH
Confidence 999999744443333210 0 1111 0111223456666654321 1112456778777777532
Q ss_pred -cCCCCccEEEeCCCCccccc-cccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeE
Q 008885 150 -EEPGIVDLFLTNEWPSGVTN-KAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTR 226 (550)
Q Consensus 150 -~~~~~vDILLTh~wP~gi~~-~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~f~er~Py~~~~~~~~TR 226 (550)
......-|++.|..|..... ..+ . .....+..+.+++++. +.+.+|+||.|..+.. ....++
T Consensus 152 ~~~~~~~~vv~~hH~P~~~~~~~~d------~--~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~-------~~~gi~ 216 (275)
T PRK11148 152 ADAPERHTLVLLHHHPLPAGCAWLD------Q--HSLRNAHELAEVLAKFPNVKAILCGHIHQELDL-------DWNGRR 216 (275)
T ss_pred hhCCCCCeEEEEcCCCCCCCcchhh------c--cCCCCHHHHHHHHhcCCCceEEEecccChHHhc-------eECCEE
Confidence 22223334545544432211 001 0 0124567888999886 7899999998864431 123456
Q ss_pred EEEcCCCC
Q 008885 227 FLGLAPVG 234 (550)
Q Consensus 227 FI~La~~g 234 (550)
++..+..+
T Consensus 217 ~~~~ps~~ 224 (275)
T PRK11148 217 LLATPSTC 224 (275)
T ss_pred EEEcCCCc
Confidence 66554443
|
|
| >TIGR00209 galT_1 galactose-1-phosphate uridylyltransferase, family 1 | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.7e-09 Score=111.86 Aligned_cols=99 Identities=13% Similarity=0.076 Sum_probs=77.7
Q ss_pred CCCcccCCC-CCC-CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh-c---
Q 008885 389 KECWFCLSS-PSV-ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-Q--- 462 (550)
Q Consensus 389 ~~C~FC~~~-~~~-~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~--- 462 (550)
..|.||.+- ... ....||+.++.+++++|..|..+||+||||.+|+.++.+++++++.+|....+.+.+.+.+ .
T Consensus 194 g~clfcdIi~~E~~~~~riV~End~fvAf~p~~p~~Pgh~lIiPKrH~~~~~dl~d~e~~~La~~lk~v~~~l~~~~~~~ 273 (347)
T TIGR00209 194 KSPMLVDYVKRELADKSRTVVETEHWIAVVPYWAIWPFETLLLPKAHVLRITDLTDAQRSDLALILKKLTSKYDNLFETS 273 (347)
T ss_pred CCccHHHHHHhHhhcCCeEEEECCCEEEEeccCCCCCCeEEEeeccCCCChhhCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 479999864 233 2457899999999999999999999999999999999999999999999888877776653 2
Q ss_pred -CCceEEEe-ecCC---CcCeEEEEEeecC
Q 008885 463 -GKEAVFFE-WLSK---RGTHANLQAVPIP 487 (550)
Q Consensus 463 -~~~~v~~E-~~~~---~~~H~hi~~vPvp 487 (550)
+++.++.. -.+. ...|+|+|++|.-
T Consensus 274 ~pYn~~~h~~p~~~~~~~~~H~HihiiPrl 303 (347)
T TIGR00209 274 FPYSMGWHGAPFNGEENQHWQLHAHFYPPL 303 (347)
T ss_pred CCcceeEEecccCCCCCcEEEEEEEEeCCc
Confidence 35555544 1222 2358999999973
|
This enzyme is involved in glucose and galactose interconversion. This model describes one of two extremely distantly related branches of the model pfam01087 from PFAM. |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.6e-08 Score=92.30 Aligned_cols=133 Identities=18% Similarity=0.159 Sum_probs=83.2
Q ss_pred EEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHHh
Q 008885 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAA 84 (550)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~l 84 (550)
||++++|+||+.+.+.+.++.+. ..|.||++||+....... . .....|+++|.||||... .
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~----~~d~ii~~GD~~~~~~~~--~--------~~~~~~~~~V~GNhD~~~-~---- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFG----DVDLIIHAGDVLYPGPLN--E--------LELKAPVIAVRGNCDGEV-D---- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhc----CCCEEEECCccccccccc--h--------hhcCCcEEEEeCCCCCcC-C----
Confidence 69999999999866554444432 279999999996542211 1 123468999999997420 0
Q ss_pred hccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCCC
Q 008885 85 SKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWP 164 (550)
Q Consensus 85 ~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh~wP 164 (550)
+..|....+++++| .-|+++|.++
T Consensus 62 -------------------~~~~p~~~~~~~~g-------------------------------------~~i~v~Hg~~ 85 (155)
T cd00841 62 -------------------FPILPEEAVLEIGG-------------------------------------KRIFLTHGHL 85 (155)
T ss_pred -------------------cccCCceEEEEECC-------------------------------------EEEEEECCcc
Confidence 00011011222333 4567777776
Q ss_pred ccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCCc
Q 008885 165 SGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNK 236 (550)
Q Consensus 165 ~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~~ 236 (550)
...... ... .+++......|+++||.|..+.+ ....+++||.|+++.+
T Consensus 86 ~~~~~~----------------~~~-~~~~~~~~~d~vi~GHtH~~~~~-------~~~~~~~inpGs~~~~ 133 (155)
T cd00841 86 YGVKNG----------------LDR-LYLAKEGGADVVLYGHTHIPVIE-------KIGGVLLLNPGSLSLP 133 (155)
T ss_pred cccccc----------------hhh-hhhhhhcCCCEEEECcccCCccE-------EECCEEEEeCCCccCc
Confidence 554210 011 45566778899999999876553 2346899999999865
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >PRK11720 galactose-1-phosphate uridylyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.8e-09 Score=110.77 Aligned_cols=99 Identities=13% Similarity=0.048 Sum_probs=77.3
Q ss_pred CCCcccCCC-CCCC-cceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh-c---
Q 008885 389 KECWFCLSS-PSVE-SHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-Q--- 462 (550)
Q Consensus 389 ~~C~FC~~~-~~~~-~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~--- 462 (550)
..|.||.+- .+.+ ...||+.++++++++|..|..|||+||||.+|+.++.+++++++.+|....+.+.+.+.+ .
T Consensus 194 g~Clfcdii~~E~~~~~RiV~End~fvAf~p~~p~~P~h~lIiPKrH~~~~~dl~dee~~~La~~lk~v~~~l~~~~~~~ 273 (346)
T PRK11720 194 GSPLLVDYVQRELADGERIVVETEHWLAVVPYWAAWPFETLLLPKAHVLRLTDLTDAQRDDLALALKKLTSRYDNLFQCS 273 (346)
T ss_pred CCeEHHHHHHhhhhcCCeEEEECCCEEEEeccccCCCCeEEEecccCCCChhhCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 579999864 2332 247899999999999999999999999999999999999999999999887777766653 2
Q ss_pred -CCceEEEee-cCC---CcCeEEEEEeecC
Q 008885 463 -GKEAVFFEW-LSK---RGTHANLQAVPIP 487 (550)
Q Consensus 463 -~~~~v~~E~-~~~---~~~H~hi~~vPvp 487 (550)
++++++... .+. ...|+|+|++|.-
T Consensus 274 ~pyn~~~h~~p~~~~~~~~~H~HihiiPrl 303 (346)
T PRK11720 274 FPYSMGWHGAPFNGEENDHWQLHAHFYPPL 303 (346)
T ss_pred CCCceeEEecccCCCCCeeEEEEEEEeCCc
Confidence 345454441 111 2579999999963
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.5e-08 Score=87.53 Aligned_cols=131 Identities=19% Similarity=0.242 Sum_probs=87.7
Q ss_pred EEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHHhhc
Q 008885 7 LLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASK 86 (550)
Q Consensus 7 Lv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~l~~ 86 (550)
+++||+|+..............+..+.|+||++||++.............+........|++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 579999999888766542223333457999999999765332221111101222567899999999983
Q ss_pred cccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCCCcc
Q 008885 87 NSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSG 166 (550)
Q Consensus 87 ~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh~wP~g 166 (550)
|+++|.+|..
T Consensus 70 ----------------------------------------------------------------------i~~~H~~~~~ 79 (131)
T cd00838 70 ----------------------------------------------------------------------ILLTHGPPYD 79 (131)
T ss_pred ----------------------------------------------------------------------EEEeccCCCC
Confidence 8999999987
Q ss_pred ccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcC
Q 008885 167 VTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLA 231 (550)
Q Consensus 167 i~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La 231 (550)
....... ........+..++...+|.++|+||.|.++...+ ....+++|++|
T Consensus 80 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~-----~~~~~~~v~~g 131 (131)
T cd00838 80 PLDELSP--------DEDPGSEALLELLEKYGVDLVLSGHTHVYERREP-----DGGGTLYINPG 131 (131)
T ss_pred Cchhhcc--------cchhhHHHHHHHHHHhCCCEEEeCCeeccccccC-----CCCceEEecCC
Confidence 6543221 0123578899999999999999999998777542 13346666553
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.4e-08 Score=93.03 Aligned_cols=68 Identities=7% Similarity=0.087 Sum_probs=46.5
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh-------hhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-------ELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~-------~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
|||++++|+||++..+ +++.++.++. +.|.||++||++.... ...+++.+++ .+...++++|.||||.
T Consensus 1 mri~viSD~Hg~~~~~-~~~l~~~~~~-~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l---~~~~~~v~~V~GNhD~ 75 (182)
T PRK09453 1 MKLMFASDTHGSLPAT-EKALELFAQS-GADWLVHLGDVLYHGPRNPLPEGYAPKKVAELL---NAYADKIIAVRGNCDS 75 (182)
T ss_pred CeEEEEEeccCCHHHH-HHHHHHHHhc-CCCEEEEcccccccCcCCCCccccCHHHHHHHH---HhcCCceEEEccCCcc
Confidence 7999999999998764 4444433333 4799999999974211 0123455554 3455689999999984
|
|
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.4e-08 Score=94.48 Aligned_cols=163 Identities=17% Similarity=0.173 Sum_probs=92.6
Q ss_pred CCEEEEEcCCCCChH----HHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChH
Q 008885 3 PPRILLCGDVLGRLN----QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAA 78 (550)
Q Consensus 3 ~~KILv~GDvhG~~~----~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~ 78 (550)
.|||++++|+|.... .+.+.++.+.+ . ..|+||++||++.......+.+.+++.. ...+.|+|++.||||...
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~-~-~~d~vl~~GD~~~~~~~~~~~~~~~l~~-l~~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINA-L-KPDLVVLTGDLVDGSVDVLELLLELLKK-LKAPLGVYAVLGNHDYYS 77 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhc-c-CCCEEEEcCcccCCcchhhHHHHHHHhc-cCCCCCEEEECCCccccc
Confidence 389999999998643 22222333333 2 4699999999986543322345555543 335689999999999642
Q ss_pred HH----HHHhhccccccCcccCCceecCcEEEcCCCCeE-EEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCC
Q 008885 79 KV----LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF-TLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPG 153 (550)
Q Consensus 79 ~~----l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~-~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~ 153 (550)
.. .+.+. ..++.+|....+. +..|.+|.-+|-.... .. .+.....+... ...
T Consensus 78 ~~~~~~~~~l~---------------~~~v~~L~~~~~~~~~~~~~i~i~G~~~~~-~~-----~~~~~~~~~~~--~~~ 134 (223)
T cd07385 78 GDEENWIEALE---------------SAGITVLRNESVEISVGGATIGIAGVDDGL-GR-----RPDLEKALKGL--DED 134 (223)
T ss_pred CchHHHHHHHH---------------HcCCEEeecCcEEeccCCeEEEEEeccCcc-cc-----CCCHHHHHhCC--CCC
Confidence 21 11121 2456677654433 3567676666522110 00 01111122221 235
Q ss_pred CccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccc
Q 008885 154 IVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPY 216 (550)
Q Consensus 154 ~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py 216 (550)
.+.|+|+|. |..+.. +......|.++||.|.+--+.|+
T Consensus 135 ~~~I~l~H~-P~~~~~------------------------~~~~~~dl~l~GHtHggqi~~~~ 172 (223)
T cd07385 135 DPNILLAHQ-PDTAEE------------------------AAAWGVDLQLSGHTHGGQIRLPG 172 (223)
T ss_pred CCEEEEecC-CChhHH------------------------hcccCccEEEeccCCCCEEeccc
Confidence 689999997 322211 13457789999998876555554
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.9e-07 Score=94.86 Aligned_cols=196 Identities=16% Similarity=0.105 Sum_probs=104.9
Q ss_pred CEEEEEcCCC--CC-----------hHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh----hhHHHHHHHhcccCCCCcc
Q 008885 4 PRILLCGDVL--GR-----------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS----ELLDEFMNYVEGRSEIPIP 66 (550)
Q Consensus 4 ~KILv~GDvh--G~-----------~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~----~~~~~~~~~l~g~~~~p~p 66 (550)
.||++++|+| .+ .+.+-+.++.+++. ++|+||++||+..... ...+.+.+++ ..+++|
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~--~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l---~~l~~p 75 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRE--SLDFVVQLGDIIDGDNARAEEALDAVLAIL---DRLKGP 75 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcC--CCCEEEECCCeecCCCchHHHHHHHHHHHH---HhcCCC
Confidence 3799999999 21 23334445555544 3899999999975432 2223344444 456799
Q ss_pred EEEEecCCCChHHHHHHhhccccccCcccCCceecCcEEEcCC-CCeEEEcCeEEEEEeCccCCCC--------------
Q 008885 67 TYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKG-SGNFTLHGLSVAYLSGRQSSEG-------------- 131 (550)
Q Consensus 67 tyfv~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~-~gv~~i~GlrIa~lgG~~~~~~-------------- 131 (550)
+|+++||||........... .. ....+. .-.++.+|.++.+|-+......
T Consensus 76 ~~~v~GNHD~~~~~~~~~~~--------------~~-~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~ 140 (267)
T cd07396 76 VHHVLGNHDLYNPSREYLLL--------------YT-LLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADD 140 (267)
T ss_pred EEEecCccccccccHhhhhc--------------cc-ccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHH
Confidence 99999999853211111100 00 000110 0122346778877766321100
Q ss_pred ----------C----CCCCCCHHHHHHHHHh-hcC--CCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHH
Q 008885 132 ----------Q----QFGTYSQDDVDALRAL-AEE--PGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELV 194 (550)
Q Consensus 132 ----------~----~~~~~te~di~~L~~l-~~~--~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~ 194 (550)
. ..+.+.+++..-|++. +.. ....=|+++|.+|..... ... ........+.+++
T Consensus 141 ~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~~~viV~~Hhp~~~~~~-~~~--------~~~~~~~~~~~ll 211 (267)
T cd07396 141 NSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANGEKVIIFSHFPLHPEST-SPH--------GLLWNHEEVLSIL 211 (267)
T ss_pred hchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhcCCeEEEEEeccCCCCCC-Ccc--------ccccCHHHHHHHH
Confidence 0 0124456666655542 211 112238999998754321 110 0122356777888
Q ss_pred HHh-CCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCC
Q 008885 195 AEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 195 ~~l-kPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~ 235 (550)
+.. +.+++|+||.|...... ...+.|+..+....
T Consensus 212 ~~~~~V~~v~~GH~H~~~~~~-------~~gi~~~~~~a~~~ 246 (267)
T cd07396 212 RAYGCVKACISGHDHEGGYAQ-------RHGIHFLTLEGMVE 246 (267)
T ss_pred HhCCCEEEEEcCCcCCCCccc-------cCCeeEEEechhhc
Confidence 774 67899999988765422 22455555555443
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PHA03008 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=8.7e-09 Score=96.54 Aligned_cols=116 Identities=14% Similarity=0.108 Sum_probs=71.4
Q ss_pred cCcEEEcCCCCeEEE----cCeEEEEEeCccCCCCCC--------CCCCCHHHHHHHHHhhcCCCCccEEEeCCCCcccc
Q 008885 101 TDNLFWLKGSGNFTL----HGLSVAYLSGRQSSEGQQ--------FGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVT 168 (550)
Q Consensus 101 ~~Nl~~Lg~~gv~~i----~GlrIa~lgG~~~~~~~~--------~~~~te~di~~L~~l~~~~~~vDILLTh~wP~gi~ 168 (550)
..|++||..+++ ++ .|++|.|-+-+..-.++. .|.|..++-+.+.-+...+ .+||||||.||.|+.
T Consensus 98 ~gnIIYLeDs~V-tI~f~~rgIKIYGSP~sP~~~F~~sai~k~~~~wAf~~~~d~~i~wwn~IP-~tDILITHgPP~GhL 175 (234)
T PHA03008 98 ELDIIILRDDLI-EFDFFDDIIKIYGQSHIEDKKFKNSHIHKALEGIAHIKKNDDEINYRNHIP-KCDILITASPPFAIL 175 (234)
T ss_pred CCCEEEEeCCcE-EEEecCCceEEECCCCCcchhcccccccccccccccccCccccchhhccCC-CCCEEEeCCCCcccc
Confidence 358999998887 55 689988544432200211 1344322222222233344 499999999999997
Q ss_pred ccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCC
Q 008885 169 NKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 169 ~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~ 235 (550)
|. ++|++.+.+-+.++|||||++||.-.|-...-| ....-.|||---..|
T Consensus 176 D~-------------~vGC~~Ll~~I~rVKPKyHVFGh~~~~~~p~~~----~y~di~f~nsni~~n 225 (234)
T PHA03008 176 DD-------------DLACGDLFSKVIKIKPKFHIFNGLTQFSHPNIF----IYKDIIFINSNINHN 225 (234)
T ss_pred cc-------------ccCcHHHHHHHHHhCCcEEEeCCccccCCCcEE----EecceEEEecccccC
Confidence 62 479999999999999999999995333221111 122356777555544
|
|
| >KOG3379 consensus Diadenosine polyphosphate hydrolase and related proteins of the histidine triad (HIT) family [Nucleotide transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=5.3e-08 Score=86.27 Aligned_cols=88 Identities=14% Similarity=0.201 Sum_probs=70.3
Q ss_pred CCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCc--eEEEe---ecC
Q 008885 400 VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ-GKE--AVFFE---WLS 473 (550)
Q Consensus 400 ~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~-~~~--~v~~E---~~~ 473 (550)
+...-|++...++|++.+..|+.|||+||+|++-++.+.+|+.++.++|..-.+.+.+++++. +.. .|.+. .++
T Consensus 14 i~~~~VFykT~~sfafvNlkPvvpgHVLv~P~R~vpRl~dLt~~E~aDlF~t~~~v~~~lek~~~~ts~ti~iQDG~~AG 93 (150)
T KOG3379|consen 14 IPPDHVFYKTKHSFAFVNLKPVVPGHVLVSPLRVVPRLTDLTAAETADLFTTVQKVQRVLEKHYNATSLTIAIQDGPEAG 93 (150)
T ss_pred CCcceEEEeccceEEEEeccccccceEEEeccccccccccCCcHHHHHHHHHHHHHHHHHHHHhcccceEEEeccccccC
Confidence 444457888999999999999999999999999999999999999888888877777777753 222 23333 244
Q ss_pred CCcCeEEEEEeecC
Q 008885 474 KRGTHANLQAVPIP 487 (550)
Q Consensus 474 ~~~~H~hi~~vPvp 487 (550)
+.++|+|+|++|+-
T Consensus 94 QTVpHvHvHIlPR~ 107 (150)
T KOG3379|consen 94 QTVPHVHVHILPRK 107 (150)
T ss_pred cccceeEEEEcccc
Confidence 55899999999953
|
|
| >PLN02643 ADP-glucose phosphorylase | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.2e-08 Score=101.95 Aligned_cols=95 Identities=17% Similarity=0.222 Sum_probs=73.3
Q ss_pred CCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh----cCC
Q 008885 389 KECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGK 464 (550)
Q Consensus 389 ~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~----~~~ 464 (550)
..|.||.+-.. +. ||+.++.+.+++|..|..+||++|||.+|+.++.+++++++.+|....+.+.+.+.. .++
T Consensus 198 g~Clfcdii~~-E~--iV~en~~f~Af~p~ap~~P~evlIiPKrH~~~~~dl~~~e~~~La~ilk~v~~~l~~~~~~~py 274 (336)
T PLN02643 198 GKCSLCEVVKK-DL--LIDESSHFVSIAPFAATFPFEIWIIPRDHSSNFHEIDDDKAVDLGGLLKLMLQKISKQLNDPPY 274 (336)
T ss_pred CCCcHHHHHhC-cc--EEEeCCCEEEEeccccCCCCEEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 47999986532 22 899999999999999999999999999999999999999999999888766655442 245
Q ss_pred ceEEEe-ec---CCC--cCeEEEEEeec
Q 008885 465 EAVFFE-WL---SKR--GTHANLQAVPI 486 (550)
Q Consensus 465 ~~v~~E-~~---~~~--~~H~hi~~vPv 486 (550)
++++.. -. .+. ..|+|+|++|.
T Consensus 275 N~~~~~~P~~~~~~~~~~~H~hihi~PR 302 (336)
T PLN02643 275 NYMIQTSPLGVEESNLPYTHWFLQIVPQ 302 (336)
T ss_pred eeeeecCCCccccCcccceEEEEEEecC
Confidence 655555 11 111 35777799995
|
|
| >cd00608 GalT Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.5e-08 Score=103.19 Aligned_cols=100 Identities=17% Similarity=0.195 Sum_probs=76.1
Q ss_pred CCCcccCCC-CCC-CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh-c---
Q 008885 389 KECWFCLSS-PSV-ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-Q--- 462 (550)
Q Consensus 389 ~~C~FC~~~-~~~-~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~--- 462 (550)
..|.||.+- ... ....||+.++.+.+++|-.|..|+|++|||.+|+.++.+++++++.+|....+.+.+.+.+ .
T Consensus 184 g~clfcdii~~E~~~~~riV~end~~va~~p~~~~~P~e~lIiPKrH~~~~~dl~~~e~~~La~~l~~v~~~l~~~~~~~ 263 (329)
T cd00608 184 GRCLLCDYLKLELESKERIVVENEHFVAVVPFWARWPFEVHILPKRHVSRFTDLTDEEREDLAEILKRLLARYDNLFNCS 263 (329)
T ss_pred CCccHHHHHHhhhhcCCeEEEeCCCEEEEEecCCCCCcEEEEecCCCcCChhHCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 479999764 222 2357899999999999999999999999999999999999999999999888877766543 2
Q ss_pred -CCceEEEe-ecC-----CCcCeEEEEEeecCC
Q 008885 463 -GKEAVFFE-WLS-----KRGTHANLQAVPIPT 488 (550)
Q Consensus 463 -~~~~v~~E-~~~-----~~~~H~hi~~vPvp~ 488 (550)
++++++.. -.+ +...|+|+|++|+-+
T Consensus 264 ~pyn~~~h~~P~~~~~~~~~~~H~Hihi~Pr~~ 296 (329)
T cd00608 264 FPYSMGWHQAPTGGKELENWYYHWHFEIPPRRS 296 (329)
T ss_pred CCeEEEEeccCCCCCcCCcceEEEEEEeCCCcC
Confidence 34444433 111 124699999988743
|
The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer. |
| >PF11969 DcpS_C: Scavenger mRNA decapping enzyme C-term binding; PDB: 1VLR_B 1XMM_D 1XML_B 1ST0_A 3BLA_B 3BL9_B 3BL7_B 1ST4_B 1XQU_B | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.2e-08 Score=88.96 Aligned_cols=100 Identities=19% Similarity=0.266 Sum_probs=69.3
Q ss_pred CCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEecc-ccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC----
Q 008885 390 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVE-HVPNTISTSPECEKELGRFQNSLMMYYKNQGK---- 464 (550)
Q Consensus 390 ~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~-H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~~~---- 464 (550)
+|.||.+...-+...|++.++.+.++-+..|..+-|+||||.+ |+.|+.+|+.+-..-|.+++....+++++.+.
T Consensus 1 ~cif~~i~~~~~~~~vly~d~~~v~~~D~~P~a~~H~LviPk~~~i~sl~~L~~~~~~lL~~m~~~~~~~~~~~~~~~~~ 80 (116)
T PF11969_consen 1 NCIFCIIIRGEEPERVLYEDDDFVVFKDIYPKAPVHLLVIPKDPHIRSLRDLTPEHLPLLERMREVARELLKEEYPGDLD 80 (116)
T ss_dssp HHHHHHHTTSSSGGGESEEETSEEEEE-TT-SCCEEEEEEESSSS-SSGGG--GGGHHHHHHHHHHHHHHHHHHH-TT-E
T ss_pred CccceEeEcCCCCCcEEEEeCCEEEeeCCCCCcCcEEEEEeecCCCCChHHcCHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 4999988755445568888999999999999999999999999 99999999887777677766666666554321
Q ss_pred --c-eEEEeecCCCcCeEEEEEeecCCCc
Q 008885 465 --E-AVFFEWLSKRGTHANLQAVPIPTSK 490 (550)
Q Consensus 465 --~-~v~~E~~~~~~~H~hi~~vPvp~~~ 490 (550)
. .+.|- ......|+|+|+|..+...
T Consensus 81 ~~~~~~gfH-~~PS~~HLHlHvi~~~~~s 108 (116)
T PF11969_consen 81 SDDIRLGFH-YPPSVYHLHLHVISPDFDS 108 (116)
T ss_dssp GGGEEEEEE-SS-SSSS-EEEEEETTS--
T ss_pred hhhhccccc-CCCCcceEEEEEccCCCcC
Confidence 1 23344 3346789999999977543
|
|
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.4e-07 Score=84.93 Aligned_cols=140 Identities=16% Similarity=0.094 Sum_probs=89.7
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCC-CCccEEEEecCCCChHHHH
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE-IPIPTYFIGDYGVGAAKVL 81 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~-~p~ptyfv~GNhe~~~~~l 81 (550)
.|||||++|+|+.... ..+..++.... ++|+||++||+..+.. +..+ .. +..++|+|-||+|.... .
T Consensus 1 ~m~ilviSDtH~~~~~-~~~~~~~~~~~-~~d~vih~GD~~~~~~-----~~~l----~~~~~~~i~~V~GN~D~~~~-~ 68 (172)
T COG0622 1 MMKILVISDTHGPLRA-IEKALKIFNLE-KVDAVIHAGDSTSPFT-----LDAL----EGGLAAKLIAVRGNCDGEVD-Q 68 (172)
T ss_pred CcEEEEEeccCCChhh-hhHHHHHhhhc-CCCEEEECCCcCCccc-----hHHh----hcccccceEEEEccCCCccc-c
Confidence 4899999999999863 34444444433 5899999999976532 2222 22 45789999999975210 0
Q ss_pred HHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeC
Q 008885 82 LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTN 161 (550)
Q Consensus 82 ~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh 161 (550)
.-+....+++++|+||+.+=|.
T Consensus 69 -----------------------~~~p~~~~~~~~g~ki~l~HGh----------------------------------- 90 (172)
T COG0622 69 -----------------------EELPEELVLEVGGVKIFLTHGH----------------------------------- 90 (172)
T ss_pred -----------------------ccCChhHeEEECCEEEEEECCC-----------------------------------
Confidence 1122245677888887755442
Q ss_pred CCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCCcc
Q 008885 162 EWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKE 237 (550)
Q Consensus 162 ~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~~~ 237 (550)
=..+ ...-..+..++++......++||.|..... ....+.+||+|++..+.
T Consensus 91 --~~~~----------------~~~~~~l~~la~~~~~Dvli~GHTH~p~~~-------~~~~i~~vNPGS~s~pr 141 (172)
T COG0622 91 --LYFV----------------KTDLSLLEYLAKELGADVLIFGHTHKPVAE-------KVGGILLVNPGSVSGPR 141 (172)
T ss_pred --cccc----------------ccCHHHHHHHHHhcCCCEEEECCCCcccEE-------EECCEEEEcCCCcCCCC
Confidence 2211 012235566667777788899998864432 24459999999986543
|
|
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.5e-07 Score=82.79 Aligned_cols=108 Identities=15% Similarity=0.103 Sum_probs=72.6
Q ss_pred CCcEEEEecCCCCCChh-hHHHHHHHhcccCCCCccEEEEecCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCC
Q 008885 32 PFDAVLCVGQFFPDSSE-LLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGS 110 (550)
Q Consensus 32 pfD~li~~GDff~~~~~-~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~ 110 (550)
++|+||++||++..... ....+.+++.......+|+++++|||| .
T Consensus 35 ~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~GNHD------------------------~---------- 80 (144)
T cd07400 35 DPDLVVITGDLTQRGLPEEFEEAREFLDALPAPLEPVLVVPGNHD------------------------V---------- 80 (144)
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHccccCCcEEEeCCCCe------------------------E----------
Confidence 58999999999875432 223455565433333359999999985 1
Q ss_pred CeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHH
Q 008885 111 GNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTV 190 (550)
Q Consensus 111 gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i 190 (550)
|+++|.+|......... ...+...+
T Consensus 81 ----------------------------------------------iv~~Hhp~~~~~~~~~~---------~~~~~~~~ 105 (144)
T cd07400 81 ----------------------------------------------IVVLHHPLVPPPGSGRE---------RLLDAGDA 105 (144)
T ss_pred ----------------------------------------------EEEecCCCCCCCccccc---------cCCCHHHH
Confidence 89999999887432110 12377889
Q ss_pred HHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcC
Q 008885 191 SELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLA 231 (550)
Q Consensus 191 ~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La 231 (550)
.+++...+++++++||.|..+-.. +. .....|-+|+.|
T Consensus 106 ~~~l~~~~~~~~l~GH~H~~~~~~-~~--~~~~~~~~~~aG 143 (144)
T cd07400 106 LKLLAEAGVDLVLHGHKHVPYVGN-IS--NAGGGLVVIGAG 143 (144)
T ss_pred HHHHHHcCCCEEEECCCCCcCeee-cc--CCCCCEEEEecC
Confidence 999999999999999988755421 11 123456666655
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.64 E-value=9.3e-07 Score=84.47 Aligned_cols=134 Identities=15% Similarity=0.162 Sum_probs=81.6
Q ss_pred EEEEEcCCC-CChH-HHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHH
Q 008885 5 RILLCGDVL-GRLN-QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLL 82 (550)
Q Consensus 5 KILv~GDvh-G~~~-~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~ 82 (550)
.|+|++|+| |.-. .+-+.+.++.+. ..+|.+|+|||+... +..+++ ..+..|+++|.||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~-~~~d~iih~GDi~~~------~~~~~l---~~~~~~~~~V~GN~D~~~---- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP-GKIQHVLCTGNLCSK------ETYDYL---KTIAPDVHIVRGDFDENL---- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc-CCCCEEEECCCCCCH------HHHHHH---HhhCCceEEEECCCCccc----
Confidence 489999999 5422 122223333332 358999999999762 233333 223347899999997410
Q ss_pred HhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCC
Q 008885 83 AASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNE 162 (550)
Q Consensus 83 ~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh~ 162 (550)
. |....+++++|++ |++||-
T Consensus 67 ~-----------------------lp~~~~~~~~g~~-------------------------------------i~l~HG 86 (178)
T cd07394 67 N-----------------------YPETKVITVGQFK-------------------------------------IGLIHG 86 (178)
T ss_pred c-----------------------CCCcEEEEECCEE-------------------------------------EEEEEC
Confidence 0 1111233455544 456676
Q ss_pred CCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCC
Q 008885 163 WPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 163 wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~ 235 (550)
++.+.. .....+..+++...+.+.++||.|..+.+ ....+++||+|+++.
T Consensus 87 ~~~~~~----------------~~~~~~~~~~~~~~~dvii~GHTH~p~~~-------~~~g~~viNPGSv~~ 136 (178)
T cd07394 87 HQVVPW----------------GDPDSLAALQRQLDVDILISGHTHKFEAF-------EHEGKFFINPGSATG 136 (178)
T ss_pred CcCCCC----------------CCHHHHHHHHHhcCCCEEEECCCCcceEE-------EECCEEEEECCCCCC
Confidence 553221 12345667777788899999999864432 233699999999974
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.60 E-value=5.5e-07 Score=92.22 Aligned_cols=215 Identities=16% Similarity=0.122 Sum_probs=113.1
Q ss_pred CCEEEEEcCCCC---ChHHHHHHHHHHhhhcCCCcEEEEecCCCCC-Ch---hhHHHHHHHhcccCCCCccEEEEecCCC
Q 008885 3 PPRILLCGDVLG---RLNQLFKRVQSVNKSAGPFDAVLCVGQFFPD-SS---ELLDEFMNYVEGRSEIPIPTYFIGDYGV 75 (550)
Q Consensus 3 ~~KILv~GDvhG---~~~~l~~kv~~l~~k~GpfD~li~~GDff~~-~~---~~~~~~~~~l~g~~~~p~ptyfv~GNhe 75 (550)
+.+++++||.+. ....++ .++.+...++|+||++||+.-. .. ..-+.|.+.+.. ....+|+++++||||
T Consensus 4 ~~~f~v~gD~~~~~~~~~~~~---~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~-~~~~~P~~~~~GNHD 79 (294)
T cd00839 4 PFKFAVFGDMGQNTNNSTNTL---DHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEP-LASYVPYMVTPGNHE 79 (294)
T ss_pred cEEEEEEEECCCCCCCcHHHH---HHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHH-HHhcCCcEEcCcccc
Confidence 468999999995 334444 4443323468999999999532 11 112233333321 123589999999998
Q ss_pred ChHHHHHHhhccccc-cCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHH-hhcCC-
Q 008885 76 GAAKVLLAASKNSAN-QGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA-LAEEP- 152 (550)
Q Consensus 76 ~~~~~l~~l~~~~~~-~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~-l~~~~- 152 (550)
............... ......+.....+.+| .+++++++|.+|....... ......++++-|++ |+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-----sf~~g~v~fi~Lds~~~~~---~~~~~~~q~~WL~~~L~~~~~ 151 (294)
T cd00839 80 ADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWY-----SFDVGPVHFVSLSTEVDFY---GDGPGSPQYDWLEADLAKVDR 151 (294)
T ss_pred cccCCCCcccccccccccccCCCCCCCCCceE-----EEeeCCEEEEEEecccccc---cCCCCcHHHHHHHHHHHHhcc
Confidence 642111000000000 0000000000111111 2356788999886543211 11233455554543 22211
Q ss_pred --CCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCC---------CC
Q 008885 153 --GIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNV---------DA 221 (550)
Q Consensus 153 --~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~---------~~ 221 (550)
.+.-|+++|.|+.......... . ........+.+|+++.+..+.|+||.|.|--..|..+. ..
T Consensus 152 ~~~~~~iv~~H~P~~~~~~~~~~~----~--~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~~~~~ 225 (294)
T cd00839 152 SKTPWIIVMGHRPMYCSNTDHDDC----I--EGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSN 225 (294)
T ss_pred cCCCeEEEEeccCcEecCcccccc----c--hhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccccccC
Confidence 2456899999987543211100 0 01234567888899999999999999865444665331 12
Q ss_pred cceeEEEEcCCCCC
Q 008885 222 VHVTRFLGLAPVGN 235 (550)
Q Consensus 222 ~~~TRFI~La~~g~ 235 (550)
...|.+|-.|.-|.
T Consensus 226 ~~g~~yiv~G~~G~ 239 (294)
T cd00839 226 PKGPVHIVIGAGGN 239 (294)
T ss_pred CCccEEEEECCCcc
Confidence 34688888887776
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.2e-06 Score=87.67 Aligned_cols=204 Identities=15% Similarity=0.107 Sum_probs=102.2
Q ss_pred CEEEEEcCCCCChH--HHHHH-HHHHhhhcCCCcEEEEecCCCCC----C--hhhHHHHHHHhcccCCCCccEEEEecCC
Q 008885 4 PRILLCGDVLGRLN--QLFKR-VQSVNKSAGPFDAVLCVGQFFPD----S--SELLDEFMNYVEGRSEIPIPTYFIGDYG 74 (550)
Q Consensus 4 ~KILv~GDvhG~~~--~l~~k-v~~l~~k~GpfD~li~~GDff~~----~--~~~~~~~~~~l~g~~~~p~ptyfv~GNh 74 (550)
|||++++|+|.... .+.+. ++.+.......|+|+++||+|.. . .....++.+.+....+.++|+|+|.|||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 78999999995421 11111 22222222357999999999742 1 1112334444433345568999999999
Q ss_pred CChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCC
Q 008885 75 VGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGI 154 (550)
Q Consensus 75 e~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~ 154 (550)
|.. +...+.. ..++..|....+++++|.+|...-|-.... .+.....++++.. .+
T Consensus 81 D~~--~~~~~~~--------------~~g~~~l~~~~~~~~~g~~i~l~HGd~~~~-------~d~~y~~~r~~~r--~~ 135 (241)
T PRK05340 81 DFL--LGKRFAK--------------AAGMTLLPDPSVIDLYGQRVLLLHGDTLCT-------DDKAYQRFRRKVR--NP 135 (241)
T ss_pred chh--hhHHHHH--------------hCCCEEeCCcEEEEECCEEEEEECCccccc-------CCHHHHHHHHHHh--CH
Confidence 842 1111110 123455555556678999999888853211 0111122222211 11
Q ss_pred ccEEEeCCCCccccc----c----ccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeE
Q 008885 155 VDLFLTNEWPSGVTN----K----AAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTR 226 (550)
Q Consensus 155 vDILLTh~wP~gi~~----~----~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TR 226 (550)
.=+.+-+..|..... . +..........-.......+.++++...+++.++||.|.-... .+.+ ....-+
T Consensus 136 ~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~-~~~~--~~~~~~ 212 (241)
T PRK05340 136 WLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIH-QLQA--GGQPAT 212 (241)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCccee-eccC--CCcceE
Confidence 111111223322210 0 0000000000012344567889999999999999998753211 1111 111236
Q ss_pred EEEcCCCCC
Q 008885 227 FLGLAPVGN 235 (550)
Q Consensus 227 FI~La~~g~ 235 (550)
.++||.+..
T Consensus 213 ~~~lgdw~~ 221 (241)
T PRK05340 213 RIVLGDWHE 221 (241)
T ss_pred EEEeCCCCC
Confidence 899999964
|
|
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.9e-07 Score=91.13 Aligned_cols=190 Identities=15% Similarity=0.134 Sum_probs=96.2
Q ss_pred EEEEEcCCC-CCh----------HH---HHHHHHHHhhhcCCCcEEEEecCCCCCCh---hhHHHHHHHhcccCCCCccE
Q 008885 5 RILLCGDVL-GRL----------NQ---LFKRVQSVNKSAGPFDAVLCVGQFFPDSS---ELLDEFMNYVEGRSEIPIPT 67 (550)
Q Consensus 5 KILv~GDvh-G~~----------~~---l~~kv~~l~~k~GpfD~li~~GDff~~~~---~~~~~~~~~l~g~~~~p~pt 67 (550)
||+.++|+| |.. .. .++++.....+. ..|+||++||+|.... .....+.+++.......+|+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEE-KVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhc-CCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCE
Confidence 699999999 321 11 223332222233 4799999999987432 22334555553222247899
Q ss_pred EEEecCCCChHHHHHHhhccccccCcccCCceecCcEEEcC---C-CCeE--E--EcCeEEEEEeCccCCCCCCCCCCCH
Q 008885 68 YFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLK---G-SGNF--T--LHGLSVAYLSGRQSSEGQQFGTYSQ 139 (550)
Q Consensus 68 yfv~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg---~-~gv~--~--i~GlrIa~lgG~~~~~~~~~~~~te 139 (550)
|++.||||.......... .....++..++ . .... . ..++.|.+++-.... ...
T Consensus 80 ~~~~GNHD~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-------~~~ 140 (223)
T cd00840 80 FIIAGNHDSPSRLGALSP------------LLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-------RLR 140 (223)
T ss_pred EEecCCCCCccccccccc------------hHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-------HHH
Confidence 999999986432111000 00113344331 0 1111 1 235666665432110 001
Q ss_pred HHHHHHHH--hhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcccccccc
Q 008885 140 DDVDALRA--LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYS 217 (550)
Q Consensus 140 ~di~~L~~--l~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~ 217 (550)
+..+.+.. ........-||++|....+...... ...+.....+...+..|+++||.|.....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~Il~~H~~~~~~~~~~~------------~~~~~~~~~~~~~~~d~v~~GH~H~~~~~---- 204 (223)
T cd00840 141 DLLADAELRPRPLDPDDFNILLLHGGVAGAGPSDS------------ERAPFVPEALLPAGFDYVALGHIHRPQII---- 204 (223)
T ss_pred HHHHHHHHHhhccCCCCcEEEEEeeeeecCCCCcc------------cccccCcHhhcCcCCCEEECCCcccCeee----
Confidence 11110111 1123456789999999887642110 11223334455678899999998876542
Q ss_pred CCCCcceeEEEEcCCC
Q 008885 218 NVDAVHVTRFLGLAPV 233 (550)
Q Consensus 218 ~~~~~~~TRFI~La~~ 233 (550)
....++++..|+.
T Consensus 205 ---~~~~~~~~ypGS~ 217 (223)
T cd00840 205 ---LGGGPPIVYPGSP 217 (223)
T ss_pred ---cCCCceEEeCCCc
Confidence 1224566665543
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.55 E-value=5e-06 Score=83.93 Aligned_cols=186 Identities=10% Similarity=-0.025 Sum_probs=99.1
Q ss_pred CCEEEEEcCCCCChH----------------HHHHHHHHHhhhcCCCcEEEEecCCCCCChh------hHHHHHHHhccc
Q 008885 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE------LLDEFMNYVEGR 60 (550)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~li~~GDff~~~~~------~~~~~~~~l~g~ 60 (550)
+.++++++|+|-... .+-..++.+++.....|+||++||++..... ..+.+.+.+..
T Consensus 4 ~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~- 82 (262)
T cd07395 4 PFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSL- 82 (262)
T ss_pred CEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhh-
Confidence 568999999998742 1112233333333367999999999754321 12234444432
Q ss_pred CCCCccEEEEecCCCChH----HHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCC
Q 008885 61 SEIPIPTYFIGDYGVGAA----KVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGT 136 (550)
Q Consensus 61 ~~~p~ptyfv~GNhe~~~----~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~ 136 (550)
...++|+|+++||||... ..+..+.. . ..+. .-.++.+|++|..|.............
T Consensus 83 ~~~~vp~~~i~GNHD~~~~~~~~~~~~f~~--------~----~g~~------~y~~~~~~~~~i~lds~~~~~~~~~~~ 144 (262)
T cd07395 83 LDPDIPLVCVCGNHDVGNTPTEESIKDYRD--------V----FGDD------YFSFWVGGVFFIVLNSQLFFDPSEVPE 144 (262)
T ss_pred ccCCCcEEEeCCCCCCCCCCChhHHHHHHH--------H----hCCc------ceEEEECCEEEEEeccccccCcccccc
Confidence 223789999999998521 11111110 0 0011 012346788888875432111110123
Q ss_pred CCHHHHHHHHHh-hcC---CCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcc
Q 008885 137 YSQDDVDALRAL-AEE---PGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 211 (550)
Q Consensus 137 ~te~di~~L~~l-~~~---~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~ 211 (550)
...++++-|++. ... ....-|+++|.||............ .........+.+++++......||||.|...
T Consensus 145 ~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~----~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~ 219 (262)
T cd07395 145 LAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYF----NIPKSVRKPLLDKFKKAGVKAVFSGHYHRNA 219 (262)
T ss_pred chHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccC----CcCHHHHHHHHHHHHhcCceEEEECccccCC
Confidence 445556555542 211 2346799999999643211000000 0001123467778888899999999988643
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.5e-06 Score=85.60 Aligned_cols=206 Identities=13% Similarity=0.108 Sum_probs=109.9
Q ss_pred CEEEEEcCCCCC-h---HHHHHHHHHHhhhcCCCcEEEEecCCCC-CC--h----hhHHHHHHHhcccCCCCccEEEEec
Q 008885 4 PRILLCGDVLGR-L---NQLFKRVQSVNKSAGPFDAVLCVGQFFP-DS--S----ELLDEFMNYVEGRSEIPIPTYFIGD 72 (550)
Q Consensus 4 ~KILv~GDvhG~-~---~~l~~kv~~l~~k~GpfD~li~~GDff~-~~--~----~~~~~~~~~l~g~~~~p~ptyfv~G 72 (550)
++++++||.-.. . ..+.+.+.++.++. +.|+||++||++- .. . ...+.+.+.+.. ....+|+|.++|
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~-~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~G 78 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAEL-GPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLG 78 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhc-CCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecC
Confidence 478999998774 1 24444455555443 5799999999853 21 1 111234455432 225789999999
Q ss_pred CCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEc------CeEEEEEeCccCC-CC--------CCCCCC
Q 008885 73 YGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLH------GLSVAYLSGRQSS-EG--------QQFGTY 137 (550)
Q Consensus 73 Nhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~------GlrIa~lgG~~~~-~~--------~~~~~~ 137 (550)
|||........+.-... .....+..++.+| .+... +++|.+|--.... .. .....+
T Consensus 79 NHD~~~~~~~~~~~~~~----~~~~~~~~~~~~y-----~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~ 149 (277)
T cd07378 79 NHDYSGNVSAQIDYTKR----PNSPRWTMPAYYY-----RVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKL 149 (277)
T ss_pred CcccCCCchheeehhcc----CCCCCccCcchhe-----EEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhh
Confidence 99864221111000000 0001011122111 12233 5788777543211 11 011223
Q ss_pred CHHHHHHHHH-hhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccc
Q 008885 138 SQDDVDALRA-LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPY 216 (550)
Q Consensus 138 te~di~~L~~-l~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py 216 (550)
.+++++-|.+ |.......=|+++|.+|........ .......+.+++++.+..++|+||.|.+....+
T Consensus 150 ~~~Q~~wL~~~L~~~~~~~~iv~~H~P~~~~~~~~~----------~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~~- 218 (277)
T cd07378 150 AEEQLAWLEKTLAASTADWKIVVGHHPIYSSGEHGP----------TSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIKD- 218 (277)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCccceeCCCCCC----------cHHHHHHHHHHHHHcCCCEEEeCCcccceeeec-
Confidence 4455555554 3222334569999999875432111 011245677888888999999999887554221
Q ss_pred cCCCCcceeEEEEcCCCCC
Q 008885 217 SNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 217 ~~~~~~~~TRFI~La~~g~ 235 (550)
....|++|..|.-+.
T Consensus 219 ----~~~~~~~i~~G~~~~ 233 (277)
T cd07378 219 ----DGSGTSFVVSGAGSK 233 (277)
T ss_pred ----CCCCcEEEEeCCCcc
Confidence 124688888875543
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.3e-06 Score=85.16 Aligned_cols=71 Identities=15% Similarity=0.085 Sum_probs=44.8
Q ss_pred CCEEEEEcCCCCC----hHHHHHHHHHHhhhcCCCcEEEEecCCCCC-ChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 3 PPRILLCGDVLGR----LNQLFKRVQSVNKSAGPFDAVLCVGQFFPD-SSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 3 ~~KILv~GDvhG~----~~~l~~kv~~l~~k~GpfD~li~~GDff~~-~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
.+||++++|+|.. .+.+-+.++.+++. +.|+|+++||++.. .....+.+.+.+.... .+.|+|+|.||||.
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~--~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~-~~~pv~~V~GNHD~ 124 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQ--KPDLILLGGDYVLFDMPLNFSAFSDVLSPLA-ECAPTFACFGNHDR 124 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhc--CCCEEEEccCcCCCCccccHHHHHHHHHHHh-hcCCEEEecCCCCc
Confidence 4899999999975 32333333333332 57999999999752 1112233444443322 24799999999985
|
|
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.6e-05 Score=79.00 Aligned_cols=102 Identities=17% Similarity=0.206 Sum_probs=61.3
Q ss_pred EEEEcCCCCCh------HHHHHHHHHHhhhcCCCcEEEEecCCCCC------ChhhHHHHHHHhcccCCCCccEEEEecC
Q 008885 6 ILLCGDVLGRL------NQLFKRVQSVNKSAGPFDAVLCVGQFFPD------SSELLDEFMNYVEGRSEIPIPTYFIGDY 73 (550)
Q Consensus 6 ILv~GDvhG~~------~~l~~kv~~l~~k~GpfD~li~~GDff~~------~~~~~~~~~~~l~g~~~~p~ptyfv~GN 73 (550)
+++++|+|... +.+++.+..+. .+.|+||++||+|.. .....+.+.+.+....+.++|+|+|.||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~---~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GN 77 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEA---RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGN 77 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhh---ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCC
Confidence 47899999542 23444443322 257999999999752 1111223333333334557899999999
Q ss_pred CCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCc
Q 008885 74 GVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGR 126 (550)
Q Consensus 74 he~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~ 126 (550)
||.. .-..+.. ..++.+|....+++++|.+|..+=|-
T Consensus 78 HD~~--~~~~~~~--------------~~gi~~l~~~~~~~~~g~~ill~HGd 114 (231)
T TIGR01854 78 RDFL--IGKRFAR--------------EAGMTLLPDPSVIDLYGQKVLLMHGD 114 (231)
T ss_pred Cchh--hhHHHHH--------------HCCCEEECCCEEEEECCEEEEEEcCc
Confidence 9842 1111110 13456666666667899999888774
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.4e-05 Score=78.04 Aligned_cols=161 Identities=12% Similarity=0.045 Sum_probs=86.1
Q ss_pred CCcEEEEecCCCCCChh-hHHH----HHHHhcccCCC--CccEEEEecCCCChH------HHHHHhhccccccCcccCCc
Q 008885 32 PFDAVLCVGQFFPDSSE-LLDE----FMNYVEGRSEI--PIPTYFIGDYGVGAA------KVLLAASKNSANQGFKMDGF 98 (550)
Q Consensus 32 pfD~li~~GDff~~~~~-~~~~----~~~~l~g~~~~--p~ptyfv~GNhe~~~------~~l~~l~~~~~~~~~~~~g~ 98 (550)
+.|+||++||++..... ..++ +..+..-.... .+|+|.|+||||... ..+..+..
T Consensus 45 ~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~------------ 112 (257)
T cd08163 45 KPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVVLPVRQRFEK------------ 112 (257)
T ss_pred CCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCCHHHHHHHHH------------
Confidence 57999999999864321 1112 22332211222 378999999998521 11111110
Q ss_pred eecCcEEEcCC-CCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHh-hc-CCCCccEEEeCCCCccccccccc--
Q 008885 99 KVTDNLFWLKG-SGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRAL-AE-EPGIVDLFLTNEWPSGVTNKAAA-- 173 (550)
Q Consensus 99 ei~~Nl~~Lg~-~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l-~~-~~~~vDILLTh~wP~gi~~~~~~-- 173 (550)
++|. ..++.++|.+|.+|-+....... ......+..+-|.+. .. .....=|||||.|..-..+....
T Consensus 113 -------~Fg~~~~~~~~~~~~fV~Lds~~l~~~~-~~~~~~~~~~~l~~~l~~~~~~~p~ILl~H~Plyr~~~~~cg~~ 184 (257)
T cd08163 113 -------YFGPTSRVIDVGNHTFVILDTISLSNKD-DPDVYQPPREFLHSFSAMKVKSKPRILLTHVPLYRPPNTSCGPL 184 (257)
T ss_pred -------HhCCCceEEEECCEEEEEEccccccCCc-ccccchhHHHHHHhhhhccCCCCcEEEEeccccccCCCCCCCCc
Confidence 1121 13456778888888775322111 122323333333332 21 12345599999997655431111
Q ss_pred --cc--ccc--ccCCC-CCCcHHHHHHHHHhCCCEEEEccCCCccc
Q 008885 174 --SD--MLV--GISDS-SNTDSTVSELVAEIKPRYHIAGSKGVFYA 212 (550)
Q Consensus 174 --~~--~~~--~~~~~-~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~e 212 (550)
.. .+. +..-. .+..+.-.+|++.+||+..|+||.|.|.+
T Consensus 185 re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~ 230 (257)
T cd08163 185 RESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCE 230 (257)
T ss_pred cccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccce
Confidence 00 111 11111 23445667899999999999999888877
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.5e-06 Score=90.30 Aligned_cols=75 Identities=23% Similarity=0.329 Sum_probs=46.8
Q ss_pred CCEEEEEcCCCCCh-----------HHHHHHHHHHhhhcCCCcEEEEecCCCCCChh-------hHHHHHHHhcc-----
Q 008885 3 PPRILLCGDVLGRL-----------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-------LLDEFMNYVEG----- 59 (550)
Q Consensus 3 ~~KILv~GDvhG~~-----------~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~-------~~~~~~~~l~g----- 59 (550)
.||||+++|+|-.. ...|+++-.+..+. ..|+||++||+|..... ..+.+..|.-|
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~-~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~ 81 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQ-DVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCE 81 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHc-CCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccc
Confidence 58999999999421 12334433333333 58999999999975321 12223332111
Q ss_pred ------------------------cCCCCccEEEEecCCCChH
Q 008885 60 ------------------------RSEIPIPTYFIGDYGVGAA 78 (550)
Q Consensus 60 ------------------------~~~~p~ptyfv~GNhe~~~ 78 (550)
...+.+|+|.|.||||++.
T Consensus 82 ~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 82 LEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1136799999999999875
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.1e-06 Score=85.56 Aligned_cols=78 Identities=10% Similarity=0.115 Sum_probs=53.9
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHH
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLA 83 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~ 83 (550)
|||+++||+||+++.+.+.++.+....++.|.||++||+..-.....+.+..++. ....+.+++++.||||. .+++-
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~-~~~~~~~~~~l~GNHE~--~~l~~ 77 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFD-LMSNDDNVVTLLGNHDD--EFYNI 77 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHH-HhhcCCCeEEEECCcHH--HHHHH
Confidence 6899999999999998877877765444579999999996543322223333322 12334679999999973 45554
Q ss_pred h
Q 008885 84 A 84 (550)
Q Consensus 84 l 84 (550)
+
T Consensus 78 ~ 78 (235)
T PHA02239 78 M 78 (235)
T ss_pred H
Confidence 4
|
|
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.1e-05 Score=76.12 Aligned_cols=72 Identities=14% Similarity=0.018 Sum_probs=46.2
Q ss_pred CCEEEEEcCCCCChH-----------HHHHHHHHHhhhcCCCcEEEEecCCCCCChh---hHHHHHHHhcccCCCCccEE
Q 008885 3 PPRILLCGDVLGRLN-----------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE---LLDEFMNYVEGRSEIPIPTY 68 (550)
Q Consensus 3 ~~KILv~GDvhG~~~-----------~l~~kv~~l~~k~GpfD~li~~GDff~~~~~---~~~~~~~~l~g~~~~p~pty 68 (550)
.+||++++|+|-... ...+.+.++.++. ++|+||++||++..... ....+..++.-.....+|++
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAE-KPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhc-CCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 579999999996322 2333444433333 57999999999653221 23344444432244579999
Q ss_pred EEecCCC
Q 008885 69 FIGDYGV 75 (550)
Q Consensus 69 fv~GNhe 75 (550)
+++||||
T Consensus 81 ~~~GNHD 87 (199)
T cd07383 81 ATFGNHD 87 (199)
T ss_pred EECccCC
Confidence 9999996
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.21 E-value=6.9e-05 Score=75.73 Aligned_cols=191 Identities=12% Similarity=0.081 Sum_probs=100.4
Q ss_pred EEEEcCCCCChH---HH--H-H-HHHHHhhhcCCCcEEEEecCCCCCCh-------hhHH---HHHHHhcccCCC-CccE
Q 008885 6 ILLCGDVLGRLN---QL--F-K-RVQSVNKSAGPFDAVLCVGQFFPDSS-------ELLD---EFMNYVEGRSEI-PIPT 67 (550)
Q Consensus 6 ILv~GDvhG~~~---~l--~-~-kv~~l~~k~GpfD~li~~GDff~~~~-------~~~~---~~~~~l~g~~~~-p~pt 67 (550)
|+.++|+|-... .. . + .++.+++- +.|+||++||+..... .... .+.+.+...... +.|+
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~--~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 79 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVI--KPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKW 79 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhh--CCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceE
Confidence 678999996321 11 1 1 12333322 4799999999864211 1122 333333222222 5899
Q ss_pred EEEecCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCC--eEE--EcCeEEEEEeCccCCCCC----CCCCCCH
Q 008885 68 YFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSG--NFT--LHGLSVAYLSGRQSSEGQ----QFGTYSQ 139 (550)
Q Consensus 68 yfv~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~g--v~~--i~GlrIa~lgG~~~~~~~----~~~~~te 139 (550)
|.|+||||.. .... ... ... .+.. .... .+.... .++ .++++|.+|......+.. ..+.+++
T Consensus 80 ~~v~GNHD~~-~~~~-~~~-~~~-~~~~---y~~~---~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~ 149 (256)
T cd07401 80 FDIRGNHDLF-NIPS-LDS-ENN-YYRK---YSAT---GRDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDK 149 (256)
T ss_pred EEeCCCCCcC-CCCC-ccc-hhh-HHHH---hhee---cCCCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCH
Confidence 9999999852 1100 000 000 0000 0000 011111 111 368899988876432111 1245678
Q ss_pred HHHHHHHH-hhcC-CCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcccccccc
Q 008885 140 DDVDALRA-LAEE-PGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYS 217 (550)
Q Consensus 140 ~di~~L~~-l~~~-~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~ 217 (550)
++++.|++ +... ..+.-|+++|.|+....... ...+.. +.+++++.++.+.||||.|...--.|.-
T Consensus 150 ~ql~wL~~~L~~~~~~~~~IV~~HhP~~~~~~~~-----------~~~~~~-~~~ll~~~~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 150 KLLDRLEKELEKSTNSNYTIWFGHYPTSTIISPS-----------AKSSSK-FKDLLKKYNVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred HHHHHHHHHHHhcccCCeEEEEEcccchhccCCC-----------cchhHH-HHHHHHhcCCcEEEeCCccCCCcceeee
Confidence 88887765 3222 23567999999985432110 112223 8888999999999999988633337776
Q ss_pred CCC
Q 008885 218 NVD 220 (550)
Q Consensus 218 ~~~ 220 (550)
+.+
T Consensus 218 ~~~ 220 (256)
T cd07401 218 YAG 220 (256)
T ss_pred ecC
Confidence 543
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=98.20 E-value=7.1e-05 Score=81.14 Aligned_cols=208 Identities=14% Similarity=0.126 Sum_probs=109.9
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChh--hHHHHHHHhcccCCCCccEEEEecCCCChHH-
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE--LLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK- 79 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~--~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~- 79 (550)
+.|++++||.+-. ......++.+++. .+|+||++||+.-.+.. .-+.|.+++.. ....+|.+.++||||....
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~--~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~-l~s~~P~m~~~GNHE~~~~~ 214 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKW--DYDVFILPGDLSYANFYQPLWDTFGRLVQP-LASQRPWMVTHGNHELEKIP 214 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhc--CCCEEEEcCccccccchHHHHHHHHHHhhh-HhhcCceEEeCccccccccc
Confidence 4689999998532 1111234444332 58999999999643221 11234444322 2235899999999995310
Q ss_pred -----HHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHH-hhc---
Q 008885 80 -----VLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA-LAE--- 150 (550)
Q Consensus 80 -----~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~-l~~--- 150 (550)
.+..+.. .+. .+........|.+| .+..+++.|..|+.-... ....++.+-|++ |++
T Consensus 215 ~~~~~~f~~y~~-rf~--mP~~~~g~~~~~yY-----Sfd~g~vhfI~Lds~~~~------~~~~~Q~~WLe~dL~~~~r 280 (427)
T PLN02533 215 ILHPEKFTAYNA-RWR--MPFEESGSTSNLYY-----SFNVYGVHIIMLGSYTDF------EPGSEQYQWLENNLKKIDR 280 (427)
T ss_pred cccCcCccchhh-ccc--CCccccCCCCCceE-----EEEECCEEEEEEeCCccc------cCchHHHHHHHHHHHhhcc
Confidence 0000000 000 00000000123332 245778899988763211 112333333433 221
Q ss_pred CCCCccEEEeCCCCccccccccccccccccCCCCCC-cHHHHHHHHHhCCCEEEEccCCCcccc-ccccCCC-CcceeEE
Q 008885 151 EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNT-DSTVSELVAEIKPRYHIAGSKGVFYAR-EPYSNVD-AVHVTRF 227 (550)
Q Consensus 151 ~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~G-s~~i~~l~~~lkPRYhf~Gh~~~f~er-~Py~~~~-~~~~TRF 227 (550)
...+.-|++.|.||......... .. ...+ -..+..|+.+.++.+.|+||.|. ||| .|..+.. ....|..
T Consensus 281 ~~~pwiIv~~H~P~y~s~~~~~~----~~---~~~~~r~~le~Ll~~~~VdlvlsGH~H~-YeR~~p~~~~~~~~~gpvy 352 (427)
T PLN02533 281 KTTPWVVAVVHAPWYNSNEAHQG----EK---ESVGMKESMETLLYKARVDLVFAGHVHA-YERFDRVYQGKTDKCGPVY 352 (427)
T ss_pred cCCCEEEEEeCCCeeecccccCC----cc---hhHHHHHHHHHHHHHhCCcEEEecceec-ccccccccCCccCCCCCEE
Confidence 12356789999999865321000 00 0111 24688899999999999999984 666 3433321 2346888
Q ss_pred EEcCCCCCc
Q 008885 228 LGLAPVGNK 236 (550)
Q Consensus 228 I~La~~g~~ 236 (550)
|-.|.-|+.
T Consensus 353 iv~G~gG~~ 361 (427)
T PLN02533 353 ITIGDGGNR 361 (427)
T ss_pred EEeCCCccc
Confidence 888887773
|
|
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.3e-06 Score=86.07 Aligned_cols=68 Identities=15% Similarity=0.198 Sum_probs=49.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
|+|+|+||+||+++.+.+.++++.-. ...|.++++||+..-++... ++.+++ .+++.++++|.||||.
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~-~~~D~li~lGDlVdrGp~s~-~vl~~l---~~l~~~~~~VlGNHD~ 68 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFD-PAKDTLWLVGDLVNRGPDSL-EVLRFV---KSLGDSAVTVLGNHDL 68 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCC-CCCCEEEEeCCccCCCcCHH-HHHHHH---HhcCCCeEEEecChhH
Confidence 57999999999999987777765321 24699999999976443322 444554 3345578999999984
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=3.2e-05 Score=81.46 Aligned_cols=139 Identities=13% Similarity=0.122 Sum_probs=74.6
Q ss_pred CEEEEEcCCC-CC----------hHHHHHHHHHHhhhcCCCcEEEEecCCCCCC---h-hhHHHHHH-HhcccCCCCccE
Q 008885 4 PRILLCGDVL-GR----------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDS---S-ELLDEFMN-YVEGRSEIPIPT 67 (550)
Q Consensus 4 ~KILv~GDvh-G~----------~~~l~~kv~~l~~k~GpfD~li~~GDff~~~---~-~~~~~~~~-~l~g~~~~p~pt 67 (550)
||||.++|+| |. +..+++++-.+..+. .+|+||++||+|... . .....+.+ ++.-..+.++|+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~-~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v 79 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAH-GITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITL 79 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHc-CCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeE
Confidence 7999999999 31 234445544333344 579999999998652 1 11122222 222224568999
Q ss_pred EEEecCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHH
Q 008885 68 YFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA 147 (550)
Q Consensus 68 yfv~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~ 147 (550)
|+|+||||.... ....... ...--...+|++.......++++|++|..+.- ...++...+..
T Consensus 80 ~~I~GNHD~~~~--~~~~~~~-----~~~ll~~~~~v~v~~~~~~v~i~g~~i~~lP~-----------~~~~~~~~~~~ 141 (340)
T PHA02546 80 HVLVGNHDMYYK--NTIRPNA-----PTELLGQYDNITVIDEPTTVDFDGCSIDLIPW-----------ICKENTEEILE 141 (340)
T ss_pred EEEccCCCcccc--cccccCc-----hHHHHhhCCCEEEeCCceEEEECCEEEEECCC-----------CCHHHHHHHHH
Confidence 999999984210 0000000 00000113677766654555677777664422 22333333332
Q ss_pred hhcCCCCccEEEeCC
Q 008885 148 LAEEPGIVDLFLTNE 162 (550)
Q Consensus 148 l~~~~~~vDILLTh~ 162 (550)
... .....|||.|.
T Consensus 142 ~l~-~~~~~ill~H~ 155 (340)
T PHA02546 142 FIK-NSKSEYCVGHW 155 (340)
T ss_pred Hhc-cCCCcEEEEee
Confidence 221 24568999995
|
|
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.4e-05 Score=86.51 Aligned_cols=117 Identities=16% Similarity=0.248 Sum_probs=66.8
Q ss_pred CCEEEEEcCCC-CCh---HHHHHH-HHHHhhh-------cCCCcEEEEecCCCCC-----Ch----------hhHHHHHH
Q 008885 3 PPRILLCGDVL-GRL---NQLFKR-VQSVNKS-------AGPFDAVLCVGQFFPD-----SS----------ELLDEFMN 55 (550)
Q Consensus 3 ~~KILv~GDvh-G~~---~~l~~k-v~~l~~k-------~GpfD~li~~GDff~~-----~~----------~~~~~~~~ 55 (550)
.++|++++|+| |.- ...+.+ +.-++.. ....|.||++||++.. .. ...+.+.+
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 47899999999 542 111222 2222311 2247999999999752 10 01124555
Q ss_pred HhcccCCCCccEEEEecCCCChHHHHHHhhccccccCcccC-Cceec-CcEEEcCCCCeEEEcCeEEEEEeCcc
Q 008885 56 YVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMD-GFKVT-DNLFWLKGSGNFTLHGLSVAYLSGRQ 127 (550)
Q Consensus 56 ~l~g~~~~p~ptyfv~GNhe~~~~~l~~l~~~~~~~~~~~~-g~ei~-~Nl~~Lg~~gv~~i~GlrIa~lgG~~ 127 (550)
++.. ....+|+++++||||.... .++.. .+... ...+. .|+.+|..-..++++|.+|.+..|..
T Consensus 323 ~L~~-L~~~i~V~~ipGNHD~~~~---~lPQ~----~l~~~l~~~l~~~~v~~lsNP~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 323 YLKQ-IPEDIKIIISPGNHDAVRQ---AEPQP----AFPEEIRSLFPEHNVTFVSNPALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHh-hhcCCeEEEecCCCcchhh---ccCCC----CccHHHHHhcCcCCeEEecCCeEEEECCEEEEEECCCC
Confidence 6543 2235899999999984321 11100 00000 00012 47888887566678999999999974
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.4e-05 Score=76.89 Aligned_cols=151 Identities=11% Similarity=0.036 Sum_probs=82.1
Q ss_pred EEEEEcCCCCChH-------HHHHHHHHHhhhcCCCcEEEEecCCCCCCh--hhHHHHHHHhcccCCCCccEEEEecCCC
Q 008885 5 RILLCGDVLGRLN-------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSS--ELLDEFMNYVEGRSEIPIPTYFIGDYGV 75 (550)
Q Consensus 5 KILv~GDvhG~~~-------~l~~kv~~l~~k~GpfD~li~~GDff~~~~--~~~~~~~~~l~g~~~~p~ptyfv~GNhe 75 (550)
+|++++|+|-..+ ...+.+.+...+. +.|+||++||+..... ...+.+.+.+....+.++|.++++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~-~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEAL-NIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHc-CCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCc
Confidence 7999999995222 2333333322222 5799999999976433 2223334444322335699999999997
Q ss_pred ChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHH-hhcCCCC
Q 008885 76 GAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA-LAEEPGI 154 (550)
Q Consensus 76 ~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~-l~~~~~~ 154 (550)
.- + +|. .. .++++++-|.+ ++.....
T Consensus 81 ~~------~---------------------~ld-~~-------------------------~~~~ql~WL~~~L~~~~~~ 107 (214)
T cd07399 81 LV------L---------------------ALE-FG-------------------------PRDEVLQWANEVLKKHPDR 107 (214)
T ss_pred ch------h---------------------hCC-CC-------------------------CCHHHHHHHHHHHHHCCCC
Confidence 20 0 011 00 01333443443 2222222
Q ss_pred ccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccc
Q 008885 155 VDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYA 212 (550)
Q Consensus 155 vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~f~e 212 (550)
-=|+++|.+|..-....+.. ... .....+...+.+|+++. +.+..|+||.|....
T Consensus 108 ~~iv~~H~p~~~~~~~~~~~-~~~--~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~ 163 (214)
T cd07399 108 PAILTTHAYLNCDDSRPDSI-DYD--SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGR 163 (214)
T ss_pred CEEEEecccccCCCCcCccc-ccc--cccccHHHHHHHHHhCCCCEEEEEccccCCCce
Confidence 34899999987432111100 000 00124566788888877 688999999876543
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.12 E-value=7.7e-06 Score=81.84 Aligned_cols=108 Identities=15% Similarity=0.227 Sum_probs=62.0
Q ss_pred EEEcCCC--CCh--HHHHHHH-HHHhhhcC---CCcEEEEecCCCCCCh---------------hhHHHHHHHhcccCCC
Q 008885 7 LLCGDVL--GRL--NQLFKRV-QSVNKSAG---PFDAVLCVGQFFPDSS---------------ELLDEFMNYVEGRSEI 63 (550)
Q Consensus 7 Lv~GDvh--G~~--~~l~~kv-~~l~~k~G---pfD~li~~GDff~~~~---------------~~~~~~~~~l~g~~~~ 63 (550)
++++|+| +.. ...+..+ +.++.... +.|+||++||++.... +....+.+++... ..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L-~~ 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDV-PS 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhc-cc
Confidence 6899999 321 1122222 22222111 4799999999986310 1123455565432 23
Q ss_pred CccEEEEecCCCChHHHH------HHhhccccccCcccCCcee-cCcEEEcCCCCeEEEcCeEEEEEeCcc
Q 008885 64 PIPTYFIGDYGVGAAKVL------LAASKNSANQGFKMDGFKV-TDNLFWLKGSGNFTLHGLSVAYLSGRQ 127 (550)
Q Consensus 64 p~ptyfv~GNhe~~~~~l------~~l~~~~~~~~~~~~g~ei-~~Nl~~Lg~~gv~~i~GlrIa~lgG~~ 127 (550)
.+|+|+++||||.....+ ..+. . .+ ..|+.++.....++++|.+|.+..|..
T Consensus 81 ~~~v~~ipGNHD~~~~~~pq~~l~~~l~-----------~-~~~~~~v~~l~Np~~~~~~g~~i~~~~G~~ 139 (243)
T cd07386 81 HIKIIIIPGNHDAVRQAEPQPALPEEIR-----------K-LFLPGNVEFVSNPALVKIHGVDVLIYHGRS 139 (243)
T ss_pred CCeEEEeCCCCCcccccCCCCCccHHHH-----------h-hcCCCceEEeCCCCEEEECCEEEEEECCCC
Confidence 589999999998531110 1110 0 01 357888876566688999999888853
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00026 Score=72.24 Aligned_cols=205 Identities=12% Similarity=0.053 Sum_probs=110.5
Q ss_pred CEEEEEcCCCCCh----------------HHHHHHHHHHhhhcCCCcEEEE-ecCCCCCChh--hH--------HHHHHH
Q 008885 4 PRILLCGDVLGRL----------------NQLFKRVQSVNKSAGPFDAVLC-VGQFFPDSSE--LL--------DEFMNY 56 (550)
Q Consensus 4 ~KILv~GDvhG~~----------------~~l~~kv~~l~~k~GpfD~li~-~GDff~~~~~--~~--------~~~~~~ 56 (550)
++||.++|+||.+ ..+...++.+.+++ .|+|++ +||++..... .. ....+.
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~--~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ 78 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAEN--PNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAA 78 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcC--CCeEEEeCCccCCccHHHHHhhhcccCCCChHHHH
Confidence 4799999999987 33444555555443 367776 9999754210 00 112223
Q ss_pred hcccCCCCccEEEEecCCCChH--HHH-HHhhccccccCcccCCceecCcEEEcC-------CCCeEEEc-CeEEEEEeC
Q 008885 57 VEGRSEIPIPTYFIGDYGVGAA--KVL-LAASKNSANQGFKMDGFKVTDNLFWLK-------GSGNFTLH-GLSVAYLSG 125 (550)
Q Consensus 57 l~g~~~~p~ptyfv~GNhe~~~--~~l-~~l~~~~~~~~~~~~g~ei~~Nl~~Lg-------~~gv~~i~-GlrIa~lgG 125 (550)
+ ..+.. .+++.||||... +.+ +.+.. .+...++.|+.+.. ..-+++++ |+||+.+|=
T Consensus 79 l---n~~g~-d~~~lGNHe~d~g~~~l~~~~~~--------~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~ 146 (277)
T cd07410 79 M---NALGY-DAGTLGNHEFNYGLDYLDKVIKQ--------ANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGL 146 (277)
T ss_pred H---HhcCC-CEEeecccCcccCHHHHHHHHHh--------CCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEec
Confidence 2 33444 477889999753 222 22221 12346788888764 12355789 999999987
Q ss_pred ccCCCCC--C-----CCCCCHHHHHHHHH----hhcCCCCcc--EEEeCCCCccccccccccccccccCCCCCCcHHHHH
Q 008885 126 RQSSEGQ--Q-----FGTYSQDDVDALRA----LAEEPGIVD--LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSE 192 (550)
Q Consensus 126 ~~~~~~~--~-----~~~~te~di~~L~~----l~~~~~~vD--ILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~ 192 (550)
....... . ...+++ .++++++ +.. .++| |+|+|.--..-.. + .........+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~v~~lr~--~~~D~IIvl~H~g~~~~~~-------~-----~~~~~~~~~~ 211 (277)
T cd07410 147 TTPQIPNWEKPNLIGGLKFTD-PVETAKKYVPKLRA--EGADVVVVLAHGGFERDLE-------E-----SLTGENAAYE 211 (277)
T ss_pred CCcccccccCcccCCCcEEcC-HHHHHHHHHHHHHH--cCCCEEEEEecCCcCCCcc-------c-----ccCCccHHHH
Confidence 5331110 0 012221 1222222 211 3466 4677763322100 0 0122334456
Q ss_pred HHHH-hCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCCcccceeEEEeccC
Q 008885 193 LVAE-IKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPT 248 (550)
Q Consensus 193 l~~~-lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~~~K~Kw~yAf~i~ 248 (550)
|+++ -..-..|.||.|..+..+ ....|.++.-|..|. ++--++|+
T Consensus 212 la~~~~~vD~IlgGHsH~~~~~~------~~~~~~v~q~g~~g~-----~vg~l~l~ 257 (277)
T cd07410 212 LAEEVPGIDAILTGHQHRRFPGP------TVNGVPVVQPGNWGS-----HLGVIDLT 257 (277)
T ss_pred HHhcCCCCcEEEeCCCccccccC------CcCCEEEEcCChhhC-----EEEEEEEE
Confidence 6665 356788899988765421 234688888777765 66655554
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.5e-05 Score=79.34 Aligned_cols=77 Identities=13% Similarity=0.110 Sum_probs=51.0
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhh-------cC-CCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCC
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKS-------AG-PFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGV 75 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k-------~G-pfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe 75 (550)
|||.|+||+||++++|.+.++.+.-. .+ +.|.+|++||+..-... ..+..+++.... ..-.+++|-||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~-s~evl~~l~~l~-~~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPD-SPEVLRLVMSMV-AAGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCC-HHHHHHHHHHHh-hCCcEEEEECCcH
Confidence 68999999999999988888776321 11 36999999999764333 223444442111 1235889999998
Q ss_pred ChHHHHHHh
Q 008885 76 GAAKVLLAA 84 (550)
Q Consensus 76 ~~~~~l~~l 84 (550)
. .++..+
T Consensus 79 ~--~l~~~~ 85 (234)
T cd07423 79 N--KLYRKL 85 (234)
T ss_pred H--HHHHHh
Confidence 3 344433
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.4e-05 Score=78.95 Aligned_cols=74 Identities=23% Similarity=0.307 Sum_probs=47.3
Q ss_pred CEEEEEcCCCC-C----------hHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh---hhHHHHHHHhcccCCCC-ccEE
Q 008885 4 PRILLCGDVLG-R----------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS---ELLDEFMNYVEGRSEIP-IPTY 68 (550)
Q Consensus 4 ~KILv~GDvhG-~----------~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~---~~~~~~~~~l~g~~~~p-~pty 68 (550)
||||.++|+|- . ....++++-.+..+. ..|+||++||+|.... .+...+.+++....... +|+|
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~-~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~ 79 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAE-QIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIV 79 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHc-CCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEE
Confidence 79999999993 2 122334443333333 4899999999987532 22233445554333444 8999
Q ss_pred EEecCCCChH
Q 008885 69 FIGDYGVGAA 78 (550)
Q Consensus 69 fv~GNhe~~~ 78 (550)
+|.||||...
T Consensus 80 ~i~GNHD~~~ 89 (253)
T TIGR00619 80 VISGNHDSAQ 89 (253)
T ss_pred EEccCCCChh
Confidence 9999999753
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.1e-05 Score=76.74 Aligned_cols=66 Identities=18% Similarity=0.174 Sum_probs=46.8
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
.||+++||+||+++.+.+.++.+..+ ...|.+|++||+..-.... .+..+++. . .++++|.||||.
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~-~~~d~~~~~GD~v~~g~~~-~~~~~~l~---~--~~~~~v~GNhe~ 66 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFD-PARDRLISVGDLIDRGPES-LACLELLL---E--PWFHAVRGNHEQ 66 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCC-CCCCEEEEeCCcccCCCCH-HHHHHHHh---c--CCEEEeECCChH
Confidence 37999999999999877666665432 2479999999996533222 23445542 2 368999999984
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0014 Score=65.64 Aligned_cols=201 Identities=12% Similarity=0.052 Sum_probs=106.3
Q ss_pred CEEEEEcCCCCCh---------HHHHHHHHHHhhhcCCCcEEEEecCCCCCChhh----HHHHHHHhcccCCCCccEEEE
Q 008885 4 PRILLCGDVLGRL---------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL----LDEFMNYVEGRSEIPIPTYFI 70 (550)
Q Consensus 4 ~KILv~GDvhG~~---------~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~----~~~~~~~l~g~~~~p~ptyfv 70 (550)
++|+.++|+||.+ .++...++++++.+ +-.+++..||++...... ...+.+.+ ..++ ..+++
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~-~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l---~~~g-~d~~~ 75 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAEN-ENTLLLDAGDNFDGSPPSTATKGEANIELM---NALG-YDAVT 75 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcC-CCeEEEeCCccCCCccchhccCCcHHHHHH---HhcC-CCEEe
Confidence 4899999999876 45555566665543 434889999996542210 11223333 2333 46788
Q ss_pred ecCCCChHH---HHHHhhccccccCcccCCceecCcEEEcC---------CCCeEEEcCeEEEEEeCccCCCCC-----C
Q 008885 71 GDYGVGAAK---VLLAASKNSANQGFKMDGFKVTDNLFWLK---------GSGNFTLHGLSVAYLSGRQSSEGQ-----Q 133 (550)
Q Consensus 71 ~GNhe~~~~---~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg---------~~gv~~i~GlrIa~lgG~~~~~~~-----~ 133 (550)
.||||.... +.+.+.. .+...++.|+.+-+ ...+++++|+||+.+|-....... .
T Consensus 76 ~GNHe~d~g~~~l~~~~~~--------~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~ 147 (252)
T cd00845 76 IGNHEFDYGLDALAELYKD--------ANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGW 147 (252)
T ss_pred eccccccccHHHHHHHHHh--------CCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCc
Confidence 899996422 2222221 12335677776543 123567899999999875432111 0
Q ss_pred CCCCC-HHHHHHHHH-hhcCCCCccE--EEeCCCCccccccccccccccccCCCCCCcHHHHHHHHH-hCCCEEEEccCC
Q 008885 134 FGTYS-QDDVDALRA-LAEEPGIVDL--FLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAE-IKPRYHIAGSKG 208 (550)
Q Consensus 134 ~~~~t-e~di~~L~~-l~~~~~~vDI--LLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~-lkPRYhf~Gh~~ 208 (550)
...+. ++..+++.+ ......++|+ +|+| ||..- -.++++. -..-..++||.|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~D~vIvl~H-~g~~~----------------------~~~la~~~~giDlvlggH~H 204 (252)
T cd00845 148 IIGLPFEDLAEAVAVAEELLAEGADVIILLSH-LGLDD----------------------DEELAEEVPGIDVILGGHTH 204 (252)
T ss_pred ccCceecCHHHHHHHHHHHHhCCCCEEEEEec-cCccc----------------------hHHHHhcCCCccEEEcCCcC
Confidence 01111 111222221 1111245564 5666 44431 1123322 356688899988
Q ss_pred CccccccccCCCCcceeEEEEcCCCCCcccceeEEEeccCCC
Q 008885 209 VFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPTPA 250 (550)
Q Consensus 209 ~f~er~Py~~~~~~~~TRFI~La~~g~~~K~Kw~yAf~i~p~ 250 (550)
..+... .....|..+--|..+ +++-.+.|+..
T Consensus 205 ~~~~~~-----~~~~~~~v~~~g~~~-----~~~~~~~l~~~ 236 (252)
T cd00845 205 HLLEEP-----EVVNGTLIVQAGKYG-----KYVGEIDLELD 236 (252)
T ss_pred cccCCC-----cccCCEEEEeCChhH-----ceEEEEEEEEE
Confidence 644311 123457777666544 37777777644
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >KOG4359 consensus Protein kinase C inhibitor-like protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.79 E-value=3.9e-05 Score=68.41 Aligned_cols=104 Identities=15% Similarity=0.193 Sum_probs=62.4
Q ss_pred CCCCcccCCCC-CC-CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCc
Q 008885 388 SKECWFCLSSP-SV-ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKE 465 (550)
Q Consensus 388 ~~~C~FC~~~~-~~-~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~~~~ 465 (550)
.+.|.||.+.. .. .+.+..-..+++.++=++.|-..-|-|+||.+|+.+..+|..+...=+++..+.=+..|.... .
T Consensus 30 ~~~C~FCDia~r~~~~~ell~~En~~~V~fkDikPaA~~HYLvipK~Hi~~~~~L~k~~V~Lve~m~~~G~~~l~r~~-~ 108 (166)
T KOG4359|consen 30 KSTCVFCDIAGRQDPGTELLHCENEDLVCFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKTILERNN-F 108 (166)
T ss_pred CCceEEEEeecccCCCCceeEecCCcEEEEecCCccccceEEEechHHcCChhhcchhhHHHHHHHHHHHHHHHHHhc-c
Confidence 34799998763 22 233333344444445567999999999999999999999976644444433333333333221 1
Q ss_pred eEEEe-ecCC------CcCeEEEEEeecCCCchH
Q 008885 466 AVFFE-WLSK------RGTHANLQAVPIPTSKAA 492 (550)
Q Consensus 466 ~v~~E-~~~~------~~~H~hi~~vPvp~~~~~ 492 (550)
+++=| ++.. .+.|+|+|+|--|.+++-
T Consensus 109 td~~~~r~GFHLPPf~SV~HLHlH~I~P~~DMgf 142 (166)
T KOG4359|consen 109 TDFTNVRMGFHLPPFCSVSHLHLHVIAPVDDMGF 142 (166)
T ss_pred CCchheeEeccCCCcceeeeeeEeeecchHHhch
Confidence 22222 2222 256999999955555543
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=97.77 E-value=4.7e-05 Score=77.36 Aligned_cols=68 Identities=18% Similarity=0.188 Sum_probs=48.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
|.++||||+||++++|.+.++++.-. ..-|.++++||+..-+.... +..+++ ...+-.+++|.||||.
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~-~~~D~l~~lGDlVdRGP~sl-evL~~l---~~l~~~~~~VlGNHD~ 68 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFD-PGQDTLWLTGDLVARGPGSL-EVLRYV---KSLGDAVRLVLGNHDL 68 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcC-CCCCEEEEeCCccCCCCCHH-HHHHHH---HhcCCCeEEEEChhHH
Confidence 45999999999999988888777422 23699999999976443322 344454 2333346799999984
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=4.5e-05 Score=75.18 Aligned_cols=72 Identities=19% Similarity=0.215 Sum_probs=51.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHH
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLA 83 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~ 83 (550)
.||+|+||+||+++.|.+.++.+..+ ...|.+|++||+..-.+. ..+..+++. + ..+++|.||||. .+++.
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~-~~~D~li~lGDlvDrGp~-s~~vl~~l~---~--~~~~~v~GNHE~--~~l~~ 87 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFD-PWRDLLISVGDLIDRGPQ-SLRCLQLLE---E--HWVRAVRGNHEQ--MALDA 87 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCC-cccCEEEEcCcccCCCcC-HHHHHHHHH---c--CCceEeeCchHH--HHHHH
Confidence 48999999999999998888887543 236999999999754333 234555653 2 236799999973 45554
Q ss_pred h
Q 008885 84 A 84 (550)
Q Consensus 84 l 84 (550)
+
T Consensus 88 ~ 88 (218)
T PRK11439 88 L 88 (218)
T ss_pred H
Confidence 4
|
|
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=7.5e-05 Score=80.43 Aligned_cols=75 Identities=15% Similarity=0.152 Sum_probs=46.8
Q ss_pred CEEEEEcCCCC-C----------hHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh---hhHHHHHHHhcccCCCCccEEE
Q 008885 4 PRILLCGDVLG-R----------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS---ELLDEFMNYVEGRSEIPIPTYF 69 (550)
Q Consensus 4 ~KILv~GDvhG-~----------~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~---~~~~~~~~~l~g~~~~p~ptyf 69 (550)
||||.++|+|- . ...+++++..+..+. ..|+||++||+|.... .....+.+++......++|+|+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~-~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEH-QVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhc-CCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcEEE
Confidence 79999999993 2 112233333332233 5899999999986421 1122233444333456789999
Q ss_pred EecCCCChHH
Q 008885 70 IGDYGVGAAK 79 (550)
Q Consensus 70 v~GNhe~~~~ 79 (550)
|.||||....
T Consensus 80 I~GNHD~~~~ 89 (407)
T PRK10966 80 LAGNHDSVAT 89 (407)
T ss_pred EcCCCCChhh
Confidence 9999997543
|
|
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00011 Score=75.11 Aligned_cols=71 Identities=13% Similarity=0.210 Sum_probs=47.3
Q ss_pred EEEEEcCCCCChHHHHHHHHHHhhhc----CCCcEEEEecCCCCCChhhHHHHHHHhcc-cCCCCc-cEEEEecCCCC
Q 008885 5 RILLCGDVLGRLNQLFKRVQSVNKSA----GPFDAVLCVGQFFPDSSELLDEFMNYVEG-RSEIPI-PTYFIGDYGVG 76 (550)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~----GpfD~li~~GDff~~~~~~~~~~~~~l~g-~~~~p~-ptyfv~GNhe~ 76 (550)
+|+++||+||+++.|-+.++.+.... ...+.+|++||+..-.... .+..++|.. ...-+. .++|+.||||.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS-~eVld~L~~l~~~~~~~~vv~LrGNHE~ 79 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPET-RKVIDFLISLPEKHPKQRHVFLCGNHDF 79 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCH-HHHHHHHHHhhhcccccceEEEecCChH
Confidence 69999999999998888777776542 1357899999996533222 233343322 122222 47899999984
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.70 E-value=6.9e-05 Score=75.72 Aligned_cols=66 Identities=17% Similarity=0.214 Sum_probs=47.1
Q ss_pred EEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 6 ILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 6 ILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
++|+||+||+++.|.+.++++.... ..|.++++||+..-++... +..+++ .++.-.+++|.||||.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~-~~D~Li~lGDlVdRGp~s~-evl~~l---~~l~~~v~~VlGNHD~ 66 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDP-AKDRLWLVGDLVNRGPDSL-ETLRFV---KSLGDSAKTVLGNHDL 66 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCC-CCCEEEEecCcCCCCcCHH-HHHHHH---HhcCCCeEEEcCCchH
Confidence 5899999999999877777764322 3699999999976443333 344554 2333468899999985
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=7.8e-05 Score=74.86 Aligned_cols=77 Identities=12% Similarity=0.111 Sum_probs=50.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhc-------CCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSA-------GPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~-------GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
||+.|+||+||.++.|.+.++++.-.. ..-|.+|++||+..-++... +..+++.... ..-.+++|-||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~-~vl~~~~~~~-~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSL-RMIEIVWELV-EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChH-HHHHHHHHHh-hCCCEEEEeCccHH
Confidence 689999999999999888787754321 12479999999975433222 2333332111 22368999999973
Q ss_pred hHHHHHHh
Q 008885 77 AAKVLLAA 84 (550)
Q Consensus 77 ~~~~l~~l 84 (550)
.++..+
T Consensus 79 --~~l~~~ 84 (245)
T PRK13625 79 --KLYRFF 84 (245)
T ss_pred --HHHHHH
Confidence 455544
|
|
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00011 Score=78.59 Aligned_cols=74 Identities=22% Similarity=0.255 Sum_probs=48.7
Q ss_pred CEEEEEcCCCCC---------hHHHHHHHHHH---hhhcCCCcEEEEecCCCCCC---hhhHHHHHHHhcccCCCCccEE
Q 008885 4 PRILLCGDVLGR---------LNQLFKRVQSV---NKSAGPFDAVLCVGQFFPDS---SELLDEFMNYVEGRSEIPIPTY 68 (550)
Q Consensus 4 ~KILv~GDvhG~---------~~~l~~kv~~l---~~k~GpfD~li~~GDff~~~---~~~~~~~~~~l~g~~~~p~pty 68 (550)
||||.++|+|=. ++..++.+..+ .++. ..|+||++||+|... ..+...+.+.+.-.....+|+|
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~-~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~ 79 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEE-KVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVV 79 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHc-cCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEE
Confidence 799999999954 22222222222 2223 479999999999752 2334444455443356789999
Q ss_pred EEecCCCChH
Q 008885 69 FIGDYGVGAA 78 (550)
Q Consensus 69 fv~GNhe~~~ 78 (550)
.|.||||.+.
T Consensus 80 ~I~GNHD~~~ 89 (390)
T COG0420 80 VIAGNHDSPS 89 (390)
T ss_pred EecCCCCchh
Confidence 9999999764
|
|
| >PF04676 CwfJ_C_2: Protein similar to CwfJ C-terminus 2; InterPro: IPR006767 This group of sequences contain a conserved C-terminal domain which is found in the Schizosaccharomyces pombe (Fission yeast) protein Cwf19 (Q09909 from SWISSPROT) and its homologues | Back alignment and domain information |
|---|
Probab=97.66 E-value=4.1e-05 Score=65.97 Aligned_cols=42 Identities=21% Similarity=0.525 Sum_probs=34.1
Q ss_pred ccccc--cCCCCcchhhhhhhhcCCCCCeEEEEcC--CCeeeeecC
Q 008885 508 KFLAT--KSSKSSDGRRSLRAQFDRNCSFFYVELP--EGFGRLAEH 549 (550)
Q Consensus 508 ~~~~~--~~~~~~~~~~~l~~~i~~~~pYf~ve~~--~G~~~v~e~ 549 (550)
||++| ++.+...++.++++++|+++|||||+|+ .|++||+|+
T Consensus 1 ews~n~~kk~~~~~~~~~~~~~~~~~~~Yf~V~~~~~~~~~~vie~ 46 (98)
T PF04676_consen 1 EWSQNEKKKLIDTSKKKGLRRSIPKGFPYFHVEFPDGKGYAHVIED 46 (98)
T ss_pred CccccccCCcccccChHHHHHhcCCCCCEEEEEEeCCCEEEEECCc
Confidence 69988 6655444468999999999999999996 577788875
|
Cwf19 is part of the Cdc5p complex involved in mRNA splicing []. This domain is found in association with IPR006768 from INTERPRO, which is generally N-terminal and adjacent to this domain. |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0076 Score=61.09 Aligned_cols=199 Identities=13% Similarity=0.081 Sum_probs=103.2
Q ss_pred CEEEEEcCCCCChHH----------------------HHHHHHHHhhhcCCCcEEE-EecCCCCCChhh-H---HHHHHH
Q 008885 4 PRILLCGDVLGRLNQ----------------------LFKRVQSVNKSAGPFDAVL-CVGQFFPDSSEL-L---DEFMNY 56 (550)
Q Consensus 4 ~KILv~GDvhG~~~~----------------------l~~kv~~l~~k~GpfD~li-~~GDff~~~~~~-~---~~~~~~ 56 (550)
+.||.++|+||.+.. +...++++.+.. ..|+|+ -+||++...... . ..+.+.
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~-~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ 79 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAER-NPNTLLLDGGDTWQGSGEALYTRGQAMVDA 79 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhc-CCCeEEEeCCCccCCChHHhhcCChhHHHH
Confidence 369999999997533 233334433331 357775 599997643210 0 112233
Q ss_pred hcccCCCCccEEEEecCCCChH--H-HHHHhhccccccCcccCCceecCcEEEcCC-------CCeEEEcCeEEEEEeCc
Q 008885 57 VEGRSEIPIPTYFIGDYGVGAA--K-VLLAASKNSANQGFKMDGFKVTDNLFWLKG-------SGNFTLHGLSVAYLSGR 126 (550)
Q Consensus 57 l~g~~~~p~ptyfv~GNhe~~~--~-~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~-------~gv~~i~GlrIa~lgG~ 126 (550)
+ .. +...++.||||... . +...+.. .+-..++.|+.+-.. .-+++.+|+||+.+|-.
T Consensus 80 l---~~--~g~da~~GNHefd~g~~~l~~~~~~--------~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~ 146 (264)
T cd07411 80 L---NA--LGVDAMVGHWEFTYGPERVRELFGR--------LNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQT 146 (264)
T ss_pred H---Hh--hCCeEEecccccccCHHHHHHHHhh--------CCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEec
Confidence 3 33 44444459999652 1 2222221 123467888876431 23446799999999976
Q ss_pred cCCCCC-----C--CCCCC--HHHHHHH-HHhhcCCCCccE--EEeCCCCccccccccccccccccCCCCCCcHHHHHHH
Q 008885 127 QSSEGQ-----Q--FGTYS--QDDVDAL-RALAEEPGIVDL--FLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELV 194 (550)
Q Consensus 127 ~~~~~~-----~--~~~~t--e~di~~L-~~l~~~~~~vDI--LLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~ 194 (550)
...... . ...|+ .+.+.++ .++. ...++|+ +|+|..-. .-.+++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~iI~l~H~g~~-----------------------~~~~la 202 (264)
T cd07411 147 FPYVPIANPPRFTPGLTFGIREEELQEVVVKLR-REEGVDVVVLLSHNGLP-----------------------VDVELA 202 (264)
T ss_pred cCCcccccCcCCCCCcEECCHHHHHHHHHHHHH-HhCCCCEEEEEecCCch-----------------------hhHHHH
Confidence 432111 0 11222 1222222 2221 1234564 66665321 011233
Q ss_pred HHh-CCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCCcccceeEEEeccCC
Q 008885 195 AEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPTP 249 (550)
Q Consensus 195 ~~l-kPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~~~K~Kw~yAf~i~p 249 (550)
+++ ..-..+.||.|..+. .|+. ....|.++.-|..+. ++--++|+.
T Consensus 203 ~~~~~iDlilgGH~H~~~~-~~~~---~~~~t~v~~~g~~~~-----~vg~i~l~~ 249 (264)
T cd07411 203 ERVPGIDVILSGHTHERTP-KPII---AGGGTLVVEAGSHGK-----FLGRLDLDV 249 (264)
T ss_pred hcCCCCcEEEeCccccccc-Cccc---ccCCEEEEEcCcccc-----EEEEEEEEE
Confidence 332 345789999887554 2321 234688888887765 777777664
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00011 Score=72.39 Aligned_cols=71 Identities=18% Similarity=0.204 Sum_probs=48.7
Q ss_pred EEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHHh
Q 008885 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAA 84 (550)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~l 84 (550)
||+|+||+||+++.+.+.++.+.-+ ...|.+||+||+..-+.... +..+++. + -.+++|.||||. .+++.+
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~-~~~d~l~~lGD~vdrG~~~~-~~l~~l~---~--~~~~~v~GNHE~--~~~~~~ 86 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFC-PETDLLISVGDNIDRGPESL-NVLRLLN---Q--PWFISVKGNHEA--MALDAF 86 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCC-CCCCEEEECCCCcCCCcCHH-HHHHHHh---h--CCcEEEECchHH--HHHHHH
Confidence 8999999999999987777665322 24699999999976433322 3445542 2 246899999973 344433
|
|
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.012 Score=60.51 Aligned_cols=219 Identities=16% Similarity=0.141 Sum_probs=113.4
Q ss_pred CEEEEEcCCCCChHH--------------HHHHHHHHhhhcCCCcEEEEecCCCCCChh--hH---HHHHHHhcccCCCC
Q 008885 4 PRILLCGDVLGRLNQ--------------LFKRVQSVNKSAGPFDAVLCVGQFFPDSSE--LL---DEFMNYVEGRSEIP 64 (550)
Q Consensus 4 ~KILv~GDvhG~~~~--------------l~~kv~~l~~k~GpfD~li~~GDff~~~~~--~~---~~~~~~l~g~~~~p 64 (550)
++||.++|+||++.. +...++.+.+++ +-.++|-+||+|..... .. +...+.+ ..++
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~-~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~---n~~g 76 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQN-PNSLFVSAGDLIGASPFESALLQDEPTIEAL---NAMG 76 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcC-CCeEEEeCCcccccccchhhcccCCcHHHHH---HhhC
Confidence 479999999998542 444455554443 45699999998753211 00 0112222 3343
Q ss_pred ccEEEEecCCCChH---HHHHHhhcccc-------ccCc-ccCCceecCcEEEcC-------CCCeEEEcCeEEEEEeCc
Q 008885 65 IPTYFIGDYGVGAA---KVLLAASKNSA-------NQGF-KMDGFKVTDNLFWLK-------GSGNFTLHGLSVAYLSGR 126 (550)
Q Consensus 65 ~ptyfv~GNhe~~~---~~l~~l~~~~~-------~~~~-~~~g~ei~~Nl~~Lg-------~~gv~~i~GlrIa~lgG~ 126 (550)
+- +++.||||... .+.+.+..... -+.| ...-..++.|+++-. ..-+++++|+||+.+|=.
T Consensus 77 ~D-a~t~GNHefd~G~~~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~py~i~~~~G~kIgviGl~ 155 (288)
T cd07412 77 VD-ASAVGNHEFDEGYAELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPALPPYTIKDVGGVKVGFIGAV 155 (288)
T ss_pred Ce-eeeecccccccCHHHHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcccCCEEEEEECCEEEEEEeec
Confidence 43 57779999642 23333221000 0000 011236788887642 234557899999999875
Q ss_pred cCCCCC-------CCCCCCHHHHHHHHH----hhcCCCCccE--EEeCCCCccccccccccccccccCCCCCCcHHHHHH
Q 008885 127 QSSEGQ-------QFGTYSQDDVDALRA----LAEEPGIVDL--FLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSEL 193 (550)
Q Consensus 127 ~~~~~~-------~~~~~te~di~~L~~----l~~~~~~vDI--LLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l 193 (550)
...... ....|+. .++++++ +.. .++|+ +|+|.--..-.. .. + .........++
T Consensus 156 ~~~~~~~~~~~~~~g~~f~d-~~e~~~~~v~~lr~--~~~D~IIvL~H~G~~~~~~--~~---~-----~~~~~~~~~~l 222 (288)
T cd07412 156 TKDTPNLVSPDGVAGLEFTD-EVEAINAVAPELKA--GGVDAIVVLAHEGGSTKGG--DD---T-----CSAASGPIADI 222 (288)
T ss_pred CCCccceeccccccCceEcC-HHHHHHHHHHHHHH--CCCCEEEEEeCCCCCCCCC--Cc---c-----ccccChhHHHH
Confidence 321100 0112321 2233332 221 35665 668843321110 00 0 00111234566
Q ss_pred HHHh--CCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCCcccceeEEEeccCC
Q 008885 194 VAEI--KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPTP 249 (550)
Q Consensus 194 ~~~l--kPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~~~K~Kw~yAf~i~p 249 (550)
+.++ ..-..+.||.|..+.. |.. ....|.++..|..|+ ++-.+.|.-
T Consensus 223 ~~~~~~~iD~IlgGHsH~~~~~-~~~---~~~~~~v~q~g~~g~-----~vg~i~l~~ 271 (288)
T cd07412 223 VNRLDPDVDVVFAGHTHQAYNC-TVP---AGNPRLVTQAGSYGK-----AVADVDLTI 271 (288)
T ss_pred HhhcCCCCCEEEeCccCccccc-ccc---CcCCEEEEecChhhc-----eeEEEEEEE
Confidence 6665 4578999999887752 221 245688888888775 666666654
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0017 Score=61.15 Aligned_cols=149 Identities=19% Similarity=0.201 Sum_probs=91.1
Q ss_pred HhhhcCCCcEEEEecCCCCC--ChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHHhhccccccCcccCCceecCc
Q 008885 26 VNKSAGPFDAVLCVGQFFPD--SSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDN 103 (550)
Q Consensus 26 l~~k~GpfD~li~~GDff~~--~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~N 103 (550)
+..+-.|=|.|++.||+--. -+++.++| .|+ ..+|-.-|.+-|||+--..-..++. .-+.+-
T Consensus 37 W~~~v~~eDiVllpGDiSWaM~l~ea~~Dl-~~i---~~LPG~K~m~rGNHDYWw~s~skl~------------n~lp~~ 100 (230)
T COG1768 37 WRSKVSPEDIVLLPGDISWAMRLEEAEEDL-RFI---GDLPGTKYMIRGNHDYWWSSISKLN------------NALPPI 100 (230)
T ss_pred HHhcCChhhEEEecccchhheechhhhhhh-hhh---hcCCCcEEEEecCCccccchHHHHH------------hhcCch
Confidence 33444467999999999321 12223333 344 5688889999999974322223332 124566
Q ss_pred EEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHH-------HHH--hhcCCCCcc--EEEeCCCCcccccccc
Q 008885 104 LFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDA-------LRA--LAEEPGIVD--LFLTNEWPSGVTNKAA 172 (550)
Q Consensus 104 l~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~-------L~~--l~~~~~~vD--ILLTh~wP~gi~~~~~ 172 (550)
++||+. | +.+..+-|+|.-|-.++++. +..+|++|-+. |+- .+....+++ |+.||-||-.=.
T Consensus 101 l~~~n~-~-f~l~n~aI~G~RgW~s~~~~-~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~---- 173 (230)
T COG1768 101 LFYLNN-G-FELLNYAIVGVRGWDSPSFD-SEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPPFSDD---- 173 (230)
T ss_pred Hhhhcc-c-eeEeeEEEEEeecccCCCCC-cCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCC----
Confidence 888874 4 35555777777776554432 34577776543 221 122334444 788999997421
Q ss_pred ccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCC
Q 008885 173 ASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGV 209 (550)
Q Consensus 173 ~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~ 209 (550)
..++ .+.+++++.|+-..+.||.|.
T Consensus 174 -----------~t~~-~~sevlee~rv~~~lyGHlHg 198 (230)
T COG1768 174 -----------GTPG-PFSEVLEEGRVSKCLYGHLHG 198 (230)
T ss_pred -----------CCCc-chHHHHhhcceeeEEeeeccC
Confidence 1112 477888999999999999763
|
|
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0018 Score=65.58 Aligned_cols=73 Identities=16% Similarity=0.175 Sum_probs=47.8
Q ss_pred CEEEEEcCCCCC--hH---HHH-HHHHHHhhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 4 PRILLCGDVLGR--LN---QLF-KRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 4 ~KILv~GDvhG~--~~---~l~-~kv~~l~~k~GpfD~li~~GDff~~~~-~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
|||+.++|+|-. .. .++ +.++.++ ..++|+||+.||+-.... .+-+.+.++|. ....+.|+++++||||.
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~--~~~~D~~v~tGDl~~~~~~~~~~~~~~~l~-~~~~~~~~~~vpGNHD~ 77 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIE--QLKPDLLVVTGDLTNDGEPEEYRRLKELLA-RLELPAPVIVVPGNHDA 77 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHh--cCCCCEEEEccCcCCCCCHHHHHHHHHHHh-hccCCCceEeeCCCCcC
Confidence 689999999976 11 122 2223333 235699999999965422 22334556663 24788999999999986
Q ss_pred hHH
Q 008885 77 AAK 79 (550)
Q Consensus 77 ~~~ 79 (550)
...
T Consensus 78 ~~~ 80 (301)
T COG1409 78 RVV 80 (301)
T ss_pred Cch
Confidence 543
|
|
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.01 Score=60.02 Aligned_cols=112 Identities=15% Similarity=0.072 Sum_probs=66.9
Q ss_pred CEEEEEcCCCC----------ChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChh----hHHHHHHHhcccCCCCccEEE
Q 008885 4 PRILLCGDVLG----------RLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----LLDEFMNYVEGRSEIPIPTYF 69 (550)
Q Consensus 4 ~KILv~GDvhG----------~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~----~~~~~~~~l~g~~~~p~ptyf 69 (550)
++||.+.|+|+ .+..+...++++.+.+ +-.++|.+||++..... .-+...+.+ ..++. .++
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~-~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l---~~l~~-d~~ 75 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKEN-PNTLVLFSGDVLSPSLLSTATKGKQMVPVL---NALGV-DLA 75 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcC-CCEEEEECCCccCCccchhhcCCccHHHHH---HhcCC-cEE
Confidence 47999999993 3566666666666544 43499999999754210 001222333 23333 477
Q ss_pred EecCCCChH--HHHHH-hhccccccCcccCCceecCcEEEcCC---------CCeEEEcCeEEEEEeCccC
Q 008885 70 IGDYGVGAA--KVLLA-ASKNSANQGFKMDGFKVTDNLFWLKG---------SGNFTLHGLSVAYLSGRQS 128 (550)
Q Consensus 70 v~GNhe~~~--~~l~~-l~~~~~~~~~~~~g~ei~~Nl~~Lg~---------~gv~~i~GlrIa~lgG~~~ 128 (550)
+.||||... +.+.. +.. .+...++.|+.+-.. ..+++.+|+||+.+|=..+
T Consensus 76 ~~GNHefd~g~~~l~~~~~~--------~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~ 138 (257)
T cd07406 76 CFGNHEFDFGEDQLQKRLGE--------SKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEE 138 (257)
T ss_pred eecccccccCHHHHHHHHhh--------CCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecc
Confidence 899999642 22222 221 123467888876432 3455679999999986543
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00018 Score=71.20 Aligned_cols=68 Identities=15% Similarity=0.209 Sum_probs=45.9
Q ss_pred EEEcCCCCChHHHHHHHHHHhhhc------CCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 7 LLCGDVLGRLNQLFKRVQSVNKSA------GPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 7 Lv~GDvhG~~~~l~~kv~~l~~k~------GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
.|+||+||+++.|.+.++.+.... .+.|.+|++||+..-.+. ..+..+++..... +-.+++|-||||.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~-S~~vl~~l~~l~~-~~~~~~l~GNHE~ 75 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPE-IRELLEIVKSMVD-AGHALAVMGNHEF 75 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCC-HHHHHHHHHHhhc-CCCEEEEEccCcH
Confidence 589999999999888888775431 246899999999643322 2233444422121 2368999999984
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00016 Score=71.05 Aligned_cols=67 Identities=13% Similarity=0.346 Sum_probs=45.0
Q ss_pred EEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 7 LLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 7 Lv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
+|+||+||+++.+.+.++.+.. .+.|.+|++||++.......+ ...++......+.+++++.||||.
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~--~~~d~li~lGD~vdrg~~~~~-~l~~l~~~~~~~~~~~~l~GNHe~ 67 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGF--PPNDKLIFLGDYVDRGPDSVE-VIDLLLALKILPDNVILLRGNHED 67 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCC--CCCCEEEEECCEeCCCCCcHH-HHHHHHHhcCCCCcEEEEccCchh
Confidence 4899999999988766666543 246999999999754332222 222322112126789999999985
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0002 Score=70.10 Aligned_cols=69 Identities=13% Similarity=0.177 Sum_probs=46.0
Q ss_pred EEEcCCCCChHHHHHHHHHHhh------hcCCCcEEEEecCCCCCChhhHHHHHHHhcc----cCCCCccEEEEecCCCC
Q 008885 7 LLCGDVLGRLNQLFKRVQSVNK------SAGPFDAVLCVGQFFPDSSELLDEFMNYVEG----RSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 7 Lv~GDvhG~~~~l~~kv~~l~~------k~GpfD~li~~GDff~~~~~~~~~~~~~l~g----~~~~p~ptyfv~GNhe~ 76 (550)
+|+||+||+++.+.+.++.+.- -..+.|.++++||++.-.+... ++.+++.. ..+.+.+++++.||||.
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~-~vl~~l~~l~~~~~~~~~~v~~l~GNHE~ 79 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVI-EILWLLYKLEQEAAKAGGKVHFLLGNHEL 79 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHH-HHHHHHHHHHHHHHhcCCeEEEeeCCCcH
Confidence 4899999999998777765531 0135799999999976433322 22232211 12346789999999984
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0056 Score=61.82 Aligned_cols=111 Identities=16% Similarity=0.075 Sum_probs=65.1
Q ss_pred CEEEEEcCCCCChH----------HHHHHHHHHhhhcCCCcEEEEecCCCCCChhh----HHHHHHHhcccCCCCccEEE
Q 008885 4 PRILLCGDVLGRLN----------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL----LDEFMNYVEGRSEIPIPTYF 69 (550)
Q Consensus 4 ~KILv~GDvhG~~~----------~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~----~~~~~~~l~g~~~~p~ptyf 69 (550)
++||.++|+||.+. ++...++++.++ +-+++|-+||++...... ...+.+.+ ..+.+. ++
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~--~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l---n~~g~d-~~ 74 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL--DNDLLVDAGDAIQGLPISDLDKGETIIKIM---NAVGYD-AV 74 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhc--CCEEEEeCCCcCCCchhhhhcCCcHHHHHH---HhcCCc-EE
Confidence 47999999999753 344445554443 568999999997642110 01122232 334344 46
Q ss_pred EecCCCChHH--HHHHhhccccccCcccCCceecCcEEEcC-------CCCeEEEc-CeEEEEEeCcc
Q 008885 70 IGDYGVGAAK--VLLAASKNSANQGFKMDGFKVTDNLFWLK-------GSGNFTLH-GLSVAYLSGRQ 127 (550)
Q Consensus 70 v~GNhe~~~~--~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg-------~~gv~~i~-GlrIa~lgG~~ 127 (550)
+.||||.... .+..+-.. .+-..++.|+.... ..-+++.+ |+||+.+|-..
T Consensus 75 ~~GNHefd~G~~~l~~~~~~-------~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~ 135 (257)
T cd07408 75 TPGNHEFDYGLDRLKELSKE-------ADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTT 135 (257)
T ss_pred ccccccccCCHHHHHHHHhh-------CCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecC
Confidence 7799996522 22221110 12346788887653 12344677 99999999653
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.011 Score=71.94 Aligned_cols=204 Identities=15% Similarity=0.104 Sum_probs=104.8
Q ss_pred CCEEEEEcCCCCCh---HHHHHHHHHHhhhcCCCcEEEE-ecCCCCCChhh----HHHHHHHhcccCCCCccEEEEecCC
Q 008885 3 PPRILLCGDVLGRL---NQLFKRVQSVNKSAGPFDAVLC-VGQFFPDSSEL----LDEFMNYVEGRSEIPIPTYFIGDYG 74 (550)
Q Consensus 3 ~~KILv~GDvhG~~---~~l~~kv~~l~~k~GpfD~li~-~GDff~~~~~~----~~~~~~~l~g~~~~p~ptyfv~GNh 74 (550)
.++||.++|+||.+ .++...++++.+++ .|+|++ +||+|...... -....+.+ ..+.+ -+++.|||
T Consensus 660 ~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~--~~~l~ld~GD~~~gs~~~~~~~g~~~~~~l---n~lg~-d~~~~GNH 733 (1163)
T PRK09419 660 ELTILHTNDFHGHLDGAAKRVTKIKEVKEEN--PNTILVDAGDVYQGSLYSNLLKGLPVLKMM---KEMGY-DASTFGNH 733 (1163)
T ss_pred EEEEEEEeecccCCCCHHHHHHHHHHHHhhC--CCeEEEecCCCCCCcchhhhcCChHHHHHH---hCcCC-CEEEeccc
Confidence 37899999999874 45555566555444 377766 99997542110 01122333 22322 36699999
Q ss_pred CChH---HHHHHhhccc---cccCcc-cCCceecCcEEEcC---------CCCeEEEcCeEEEEEeCccCC-C-----CC
Q 008885 75 VGAA---KVLLAASKNS---ANQGFK-MDGFKVTDNLFWLK---------GSGNFTLHGLSVAYLSGRQSS-E-----GQ 132 (550)
Q Consensus 75 e~~~---~~l~~l~~~~---~~~~~~-~~g~ei~~Nl~~Lg---------~~gv~~i~GlrIa~lgG~~~~-~-----~~ 132 (550)
|... .+.+.+.... ....+. .+-..++.|+++-. ..-|++++|+||+.+|=.... . ..
T Consensus 734 Efd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~p~~ 813 (1163)
T PRK09419 734 EFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTSPGN 813 (1163)
T ss_pred ccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccCCCC
Confidence 9542 2333332110 000000 01246788887532 234456899999999875321 1 10
Q ss_pred -CCCCCCHHHHHHHHHhh---cCCCCcc--EEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEc
Q 008885 133 -QFGTYSQDDVDALRALA---EEPGIVD--LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAG 205 (550)
Q Consensus 133 -~~~~~te~di~~L~~l~---~~~~~vD--ILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~G 205 (550)
....|++ .++++++.. +...++| |+|||.--.. +. ..+.-.+.+|++++ .--..+.|
T Consensus 814 ~~~l~f~d-~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~-----d~----------~~~~~~~~~lA~~v~gIDvIigG 877 (1163)
T PRK09419 814 VKNLEFKD-PAEAAKKWVKELKEKEKVDAIIALTHLGSNQ-----DR----------TTGEITGLELAKKVKGVDAIISA 877 (1163)
T ss_pred cCCcEEcC-HHHHHHHHHHHHHhhcCCCEEEEEecCCccc-----cc----------cccccHHHHHHHhCCCCCEEEeC
Confidence 0123332 233333221 1124566 5888874321 10 01122345666655 35588899
Q ss_pred cCCCccccccccCCCCcceeEEEEcCCCCC
Q 008885 206 SKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 206 h~~~f~er~Py~~~~~~~~TRFI~La~~g~ 235 (550)
|.|..+... ...|-.+..+.+|.
T Consensus 878 HsH~~~~~~-------v~~~~ivqag~~g~ 900 (1163)
T PRK09419 878 HTHTLVDKV-------VNGTPVVQAYKYGR 900 (1163)
T ss_pred CCCcccccc-------CCCEEEEeCChhHc
Confidence 998876521 23455665555553
|
|
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.034 Score=57.12 Aligned_cols=112 Identities=18% Similarity=0.110 Sum_probs=62.6
Q ss_pred CEEEEEcCCCCChHH----------HHHHHHHHhhh---cCCCcEEEEecCCCCCChh-----hHHHHHHHhcccCCCCc
Q 008885 4 PRILLCGDVLGRLNQ----------LFKRVQSVNKS---AGPFDAVLCVGQFFPDSSE-----LLDEFMNYVEGRSEIPI 65 (550)
Q Consensus 4 ~KILv~GDvhG~~~~----------l~~kv~~l~~k---~GpfD~li~~GDff~~~~~-----~~~~~~~~l~g~~~~p~ 65 (550)
+.||.++|+||++.. +...++.+.++ .++--+++-+||++..... ....+ +.+ ..+.+
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~-~~~---n~~g~ 76 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDF-RGM---NLVGY 76 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHH-HHH---HhhCC
Confidence 479999999998533 33334433322 2455799999999743211 00011 122 23334
Q ss_pred cEEEEecCCCChHH--HHHHhhccccccCcccCCceecCcEEEcC------CCCeEEEcCeEEEEEeCcc
Q 008885 66 PTYFIGDYGVGAAK--VLLAASKNSANQGFKMDGFKVTDNLFWLK------GSGNFTLHGLSVAYLSGRQ 127 (550)
Q Consensus 66 ptyfv~GNhe~~~~--~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg------~~gv~~i~GlrIa~lgG~~ 127 (550)
- +.+.||||.... .+..+... ..-..++.|+++-. ..-+++++|+||+.+|=..
T Consensus 77 D-a~~~GNHEfD~G~~~L~~~~~~-------~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~ 138 (285)
T cd07405 77 D-AMAVGNHEFDNPLEVLRQQMKW-------ANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTT 138 (285)
T ss_pred c-EEeecccccccCHHHHHHHHhh-------CCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecc
Confidence 3 445599997632 23222111 11236788887642 1234467999999998754
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.011 Score=66.45 Aligned_cols=36 Identities=8% Similarity=0.074 Sum_probs=29.2
Q ss_pred ecCCCCCCCeEE-EEeccccCCCCCCCHHHHHHHHHH
Q 008885 416 LPKGPLVEDHVL-VIPVEHVPNTISTSPECEKELGRF 451 (550)
Q Consensus 416 l~kgpl~~gH~l-IiP~~H~~s~~~l~~~~~~Ei~~~ 451 (550)
+++|+++-+.++ |.|..=.-.+.+++-....++.+.
T Consensus 409 i~~G~IT~~di~~v~PF~N~l~v~~ltG~~Lk~~LE~ 445 (550)
T TIGR01530 409 ILPGEITFNDAYTFLPFGNTLVLVDMEGAELKQIIED 445 (550)
T ss_pred CCCCCcCHHHhheeCCcCceEEEEEecHHHHHHHHHH
Confidence 567899988877 889888888888888877777764
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0015 Score=63.64 Aligned_cols=42 Identities=14% Similarity=0.062 Sum_probs=30.8
Q ss_pred CCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCC
Q 008885 185 NTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPV 233 (550)
Q Consensus 185 ~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~ 233 (550)
.....+.+++...++++.++||.|...... ...+.++|+|.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~-------~~~~~~~n~G~W 217 (217)
T cd07398 176 VFEEAVARLARRKGVDGVICGHTHRPALHE-------LDGKLYINLGDW 217 (217)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCeEE-------ECCEEEEECCCC
Confidence 455567788889999999999988655432 225788888863
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0038 Score=60.40 Aligned_cols=35 Identities=9% Similarity=0.187 Sum_probs=29.0
Q ss_pred EEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCC
Q 008885 157 LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGV 209 (550)
Q Consensus 157 ILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~ 209 (550)
|+|||.|+... +.+.+.+++.+++|...|+||.|.
T Consensus 112 i~lsH~P~~~~------------------~~~~~~~~~~~~~p~~Ifs~H~H~ 146 (195)
T cd08166 112 IMLSHVPLLAE------------------GGQALKHVVTDLDPDLIFSAHRHK 146 (195)
T ss_pred eeeeccccccc------------------ccHHHHHHHHhcCceEEEEcCccc
Confidence 99999988642 233888999999999999999775
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.031 Score=57.22 Aligned_cols=111 Identities=12% Similarity=0.010 Sum_probs=62.8
Q ss_pred CEEEEEcCCCCCh---------------------HHHHHHHHHHhhhcCCCcEEEEecCCCCCChh----hHHHHHHHhc
Q 008885 4 PRILLCGDVLGRL---------------------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----LLDEFMNYVE 58 (550)
Q Consensus 4 ~KILv~GDvhG~~---------------------~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~----~~~~~~~~l~ 58 (550)
++||.++|+||++ .++...++++.++. +--+++-+||++..... .-+...+.+
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~-~~~l~ld~GD~~~gs~~~~~~~g~~~~~~l- 78 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAEN-PNVLFLNAGDAFQGTLWYTLYKGNADAEFM- 78 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcC-CCEEEEeCCCCCCCcchhhhcCChHHHHHH-
Confidence 4799999999875 44555555555443 33356669998753210 011122333
Q ss_pred ccCCCCccEEEEecCCCChHH---HHHHhhccccccCcccCCceecCcEEEcC----------CCCeEEEcCeEEEEEeC
Q 008885 59 GRSEIPIPTYFIGDYGVGAAK---VLLAASKNSANQGFKMDGFKVTDNLFWLK----------GSGNFTLHGLSVAYLSG 125 (550)
Q Consensus 59 g~~~~p~ptyfv~GNhe~~~~---~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg----------~~gv~~i~GlrIa~lgG 125 (550)
..+.+. +++.||||.... +.+.+.. .....++.|+..-. ...+++.+|+||+.+|=
T Consensus 79 --n~~g~D-~~~lGNHefd~G~~~l~~~~~~--------~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~ 147 (281)
T cd07409 79 --NLLGYD-AMTLGNHEFDDGVEGLAPFLNN--------LKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGY 147 (281)
T ss_pred --HhcCCC-EEEeccccccCCHHHHHHHHHh--------CCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEE
Confidence 345555 445689997632 2222221 12335777776433 12455789999999986
Q ss_pred cc
Q 008885 126 RQ 127 (550)
Q Consensus 126 ~~ 127 (550)
..
T Consensus 148 ~~ 149 (281)
T cd07409 148 TT 149 (281)
T ss_pred ec
Confidence 53
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.037 Score=59.11 Aligned_cols=213 Identities=12% Similarity=0.040 Sum_probs=107.8
Q ss_pred CCEEEEEcCCCCCh---HHHHHHHHHHhhhcCCCcEEEEecCCCCC------ChhhHHHHHHHhcccC-CCCccEEEEec
Q 008885 3 PPRILLCGDVLGRL---NQLFKRVQSVNKSAGPFDAVLCVGQFFPD------SSELLDEFMNYVEGRS-EIPIPTYFIGD 72 (550)
Q Consensus 3 ~~KILv~GDvhG~~---~~l~~kv~~l~~k~GpfD~li~~GDff~~------~~~~~~~~~~~l~g~~-~~p~ptyfv~G 72 (550)
+++++++||.-+.- ..+-+.+.++.++. ++|+||-+||-|.. ++.-...|++.++... .+.+|-|.|.|
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~-~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLG 104 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNE-RVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLG 104 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhC-CCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCC
Confidence 46899999965421 12223344444444 79999999998732 1222334666665432 26789999999
Q ss_pred CCCChHHHHHHhhccc-------------cccCcccCCceecCcEEEcCCCCeEE--------E--cC--eEEEEEeCcc
Q 008885 73 YGVGAAKVLLAASKNS-------------ANQGFKMDGFKVTDNLFWLKGSGNFT--------L--HG--LSVAYLSGRQ 127 (550)
Q Consensus 73 Nhe~~~~~l~~l~~~~-------------~~~~~~~~g~ei~~Nl~~Lg~~gv~~--------i--~G--lrIa~lgG~~ 127 (550)
|||=.-+...++.... ....-.....|..||-+|--...... . .+ +.|.++--..
T Consensus 105 NHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~~yY~~~~~f~~~~~~~~~~~~~~~~~v~fifiDT~~ 184 (394)
T PTZ00422 105 QADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPNYWYHYFTHFTDTSGPSLLKSGHKDMSVAFIFIDTWI 184 (394)
T ss_pred cccccCCchhhhccccccccccccccccccccccccCCCccCCchhheeeeeeecccccccccccCCCCEEEEEEEECch
Confidence 9974222333321000 00000012457778865521001000 0 11 2223332110
Q ss_pred CC-CCCCCCCCCHHHHHHHHH-h--hcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEE
Q 008885 128 SS-EGQQFGTYSQDDVDALRA-L--AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHI 203 (550)
Q Consensus 128 ~~-~~~~~~~~te~di~~L~~-l--~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf 203 (550)
.. ... ....++.+.+-|.+ | +....+-=|++-|-|-.......+. ..-...+..|+++.+-.+.+
T Consensus 185 l~~~~~-~~~~~~~~w~~L~~~L~~a~k~a~WkIVvGHhPIySsG~hg~~----------~~L~~~L~PLL~ky~VdlYi 253 (394)
T PTZ00422 185 LSSSFP-YKKVSERAWQDLKATLEYAPKIADYIIVVGDKPIYSSGSSKGD----------SYLSYYLLPLLKDAQVDLYI 253 (394)
T ss_pred hcccCC-ccccCHHHHHHHHHHHHhhccCCCeEEEEecCceeecCCCCCC----------HHHHHHHHHHHHHcCcCEEE
Confidence 00 000 00123444443443 2 1112334578889888876432110 01123677888999999999
Q ss_pred EccCCCccccccccCCCCcceeEEEEcCCCC
Q 008885 204 AGSKGVFYAREPYSNVDAVHVTRFLGLAPVG 234 (550)
Q Consensus 204 ~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g 234 (550)
+||.|. +|+.. ...|.||.-|.-+
T Consensus 254 sGHDH~-lq~i~------~~gt~yIvSGaGs 277 (394)
T PTZ00422 254 SGYDRN-MEVLT------DEGTAHINCGSGG 277 (394)
T ss_pred Eccccc-eEEec------CCCceEEEeCccc
Confidence 999874 45431 2357888777643
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0016 Score=67.80 Aligned_cols=73 Identities=15% Similarity=0.230 Sum_probs=48.0
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
.++.|+||+||++..|...++...... +-+.+|.+||+..-+....+.+.-++.-+...|--++.+-||||..
T Consensus 51 ~~~~vvGDiHG~~~dL~~il~~~g~~~-~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~ 123 (321)
T cd07420 51 KQVTICGDLHGKLDDLFLIFYKNGLPS-PENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDH 123 (321)
T ss_pred CCeEEEEeCCCCHHHHHHHHHHcCCCC-ccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhh
Confidence 379999999999999876665432110 2367999999976544434434333322234455689999999964
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0021 Score=65.57 Aligned_cols=72 Identities=11% Similarity=0.246 Sum_probs=48.7
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
++|.|+||+||++..+...++.+. ..+-|-++++||+..-+....+.+.-++.-+...|--++.+-||||..
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~~--~~~~~~~vfLGD~VDrG~~s~e~l~~l~~lk~~~p~~v~llrGNHE~~ 99 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLNG--PPPDTNYVFLGDYVDRGPFSIEVILLLFALKILYPNRVVLLRGNHESR 99 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHcC--CCCCceEEEeCCccCCCCChHHHHHHHHHHHhcCCCCEEEEeccccHH
Confidence 689999999999999876665432 224689999999976443333333322211234566689999999963
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0022 Score=63.58 Aligned_cols=68 Identities=12% Similarity=0.111 Sum_probs=45.4
Q ss_pred EEEEEcCCC-CC---------------hHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh--hhHHHHHHHhcccCCCCcc
Q 008885 5 RILLCGDVL-GR---------------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS--ELLDEFMNYVEGRSEIPIP 66 (550)
Q Consensus 5 KILv~GDvh-G~---------------~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~--~~~~~~~~~l~g~~~~p~p 66 (550)
+.|+++|+| |. +.++++++.++-++. ++|.||++||++.... ....++.+++. .+..+
T Consensus 16 ~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~-~~d~vIi~GDl~h~~~~~~~~~~~~~~l~---~~~~~ 91 (225)
T TIGR00024 16 DKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKY-GIEALIINGDLKHEFKKGLEWRFIREFIE---VTFRD 91 (225)
T ss_pred CeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhc-CCCEEEEcCccccccCChHHHHHHHHHHH---hcCCc
Confidence 689999999 42 113445555544444 5899999999974311 33445666763 34568
Q ss_pred EEEEecCCCC
Q 008885 67 TYFIGDYGVG 76 (550)
Q Consensus 67 tyfv~GNhe~ 76 (550)
+++|.||||.
T Consensus 92 v~~V~GNHD~ 101 (225)
T TIGR00024 92 LILIRGNHDA 101 (225)
T ss_pred EEEECCCCCC
Confidence 9999999974
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.036 Score=61.73 Aligned_cols=213 Identities=14% Similarity=0.079 Sum_probs=116.9
Q ss_pred CCEEEEEcCCCCChH---------------HHHHHHHHHhhhcCCCcEEEEecCCCCCCh--hh---HHHHHHHhcccCC
Q 008885 3 PPRILLCGDVLGRLN---------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSS--EL---LDEFMNYVEGRSE 62 (550)
Q Consensus 3 ~~KILv~GDvhG~~~---------------~l~~kv~~l~~k~GpfD~li~~GDff~~~~--~~---~~~~~~~l~g~~~ 62 (550)
++.||.+.|+||++. .+...+..+.++. +-.++|-+||++.... .. -.-..+++ ..
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~-~~~llld~GD~~~G~~l~~~~~~g~~~~~~m---N~ 101 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAEN-KNVLLLDAGDLIQGSPLSDYLTKGEPTVDLL---NA 101 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhc-CCeEEEeCCcccCCccccccccCCChHHHHH---hh
Confidence 578999999999998 6666666666655 3578999999864311 00 00112222 22
Q ss_pred CCccEEEEecCCCChHH--HHHHhhccccccCcccCCceecCcEEEcC--------CCCeEEEcCeEEEEEeCccC--CC
Q 008885 63 IPIPTYFIGDYGVGAAK--VLLAASKNSANQGFKMDGFKVTDNLFWLK--------GSGNFTLHGLSVAYLSGRQS--SE 130 (550)
Q Consensus 63 ~p~ptyfv~GNhe~~~~--~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg--------~~gv~~i~GlrIa~lgG~~~--~~ 130 (550)
++. -+.+.||||.... .+..+... ..-..++.|++.=. ..-|++++|+||+.+|=.-+ ..
T Consensus 102 m~y-Da~tiGNHEFd~g~~~l~~~~~~-------~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~ 173 (517)
T COG0737 102 LGY-DAMTLGNHEFDYGLEALARLLDE-------AKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPT 173 (517)
T ss_pred cCC-cEEeecccccccCHHHHHHHHhc-------cCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccc
Confidence 322 4667789997643 23333211 11236788887661 23355678999999995521 11
Q ss_pred CC-----CCCCCCHHHHHHHHHhhc-C-CCCcc--EEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCE
Q 008885 131 GQ-----QFGTYSQDDVDALRALAE-E-PGIVD--LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRY 201 (550)
Q Consensus 131 ~~-----~~~~~te~di~~L~~l~~-~-~~~vD--ILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRY 201 (550)
.. .-+.|+ +.++.+.++.. . ..++| |+|||..-..-...... .+ +. +.... .....
T Consensus 174 ~~~~~~~~~~~f~-d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~--~~--------~~--~~~~~--~~iD~ 238 (517)
T COG0737 174 WEKPNAIEGVTFR-DPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASE--VP--------GD--VDVAV--PGIDL 238 (517)
T ss_pred cccccccCCcEEc-CHHHHHHHHHHHHHhcCCCEEEEEeccCcCcccccccc--cc--------cc--ccccc--cCcce
Confidence 11 112443 33444443221 1 12266 58899755433221110 01 00 00000 33889
Q ss_pred EEEccCCCccccccccCCCCcceeEEEEcCCCCCcccceeEEEeccCC
Q 008885 202 HIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPTP 249 (550)
Q Consensus 202 hf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~~~K~Kw~yAf~i~p 249 (550)
.|.||.|..++..-+ ......|-.+..|.+|. ++.=+.|+-
T Consensus 239 i~~GH~H~~~~~~~~--~~~~~~t~ivqag~~gk-----~vG~~di~~ 279 (517)
T COG0737 239 IIGGHSHTVFPGGDK--PGTVNGTPIVQAGEYGK-----YVGVLDITF 279 (517)
T ss_pred EeccCCcccccCCcc--cCccCCEEEEccChhhC-----ceeEEEEEE
Confidence 999999876665421 11345688888888875 666666654
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.054 Score=56.44 Aligned_cols=41 Identities=17% Similarity=0.097 Sum_probs=27.5
Q ss_pred CEEEEEcCCCCChH------HHHHHHHHHhhh---cCCCcEEEEecCCCC
Q 008885 4 PRILLCGDVLGRLN------QLFKRVQSVNKS---AGPFDAVLCVGQFFP 44 (550)
Q Consensus 4 ~KILv~GDvhG~~~------~l~~kv~~l~~k---~GpfD~li~~GDff~ 44 (550)
++||.+.|+||++. ++...++++.++ .++--++|-+||+|.
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~q 50 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFI 50 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCcccc
Confidence 47999999999863 333334444332 145569999999864
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0036 Score=64.92 Aligned_cols=72 Identities=13% Similarity=0.211 Sum_probs=47.9
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
.+|.|+||+||++..+...+..... .+-|-++++||+..-+....+.+.-++.-+...|--++.+-||||..
T Consensus 43 ~~i~ViGDIHG~~~dL~~l~~~~g~--~~~~~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~ 114 (305)
T cd07416 43 APVTVCGDIHGQFYDLLKLFEVGGS--PANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 114 (305)
T ss_pred CCEEEEEeCCCCHHHHHHHHHhcCC--CCCceEEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHH
Confidence 4799999999999997765543221 14589999999976444333333333321234555689999999963
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0047 Score=58.24 Aligned_cols=65 Identities=15% Similarity=0.171 Sum_probs=42.4
Q ss_pred EEEcCCCCChHHHHH---------------HHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEe
Q 008885 7 LLCGDVLGRLNQLFK---------------RVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIG 71 (550)
Q Consensus 7 Lv~GDvhG~~~~l~~---------------kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~ 71 (550)
++++|+|=.....+. .++.+++...+.|.||++||++...... ...+++ ...+.|+++|.
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~--~~~~~l---~~~~~~~~~v~ 76 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAG--TELELL---SRLNGRKHLIK 76 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChH--HHHHHH---HhCCCCeEEEe
Confidence 678888865544322 2455555445689999999997653321 113344 34567899999
Q ss_pred cCCCC
Q 008885 72 DYGVG 76 (550)
Q Consensus 72 GNhe~ 76 (550)
|||+.
T Consensus 77 GNHD~ 81 (168)
T cd07390 77 GNHDS 81 (168)
T ss_pred CCCCc
Confidence 99985
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.022 Score=58.54 Aligned_cols=117 Identities=12% Similarity=-0.019 Sum_probs=62.3
Q ss_pred CCEEEEEcCCCCChH----------------HHHHHHHHHhhhcCCCcEEEEecCCCCCCh--h----hHHHHHHHhccc
Q 008885 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSS--E----LLDEFMNYVEGR 60 (550)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~li~~GDff~~~~--~----~~~~~~~~l~g~ 60 (550)
+++||.+.|+||++. .+.+.+++..++.++--++|-+||++.... . .-.-.-+++
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~m--- 81 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIF--- 81 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHH---
Confidence 578999999999864 223334333223344346677999864210 0 001122232
Q ss_pred CCCCccEEEEecCCCChH--HHHHHhhccccccCcccCCceecCcEEEcCC----------CCeEEEc-CeEEEEEeCcc
Q 008885 61 SEIPIPTYFIGDYGVGAA--KVLLAASKNSANQGFKMDGFKVTDNLFWLKG----------SGNFTLH-GLSVAYLSGRQ 127 (550)
Q Consensus 61 ~~~p~ptyfv~GNhe~~~--~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~----------~gv~~i~-GlrIa~lgG~~ 127 (550)
..+++ =+++.||||... ..++.+..... ...-..++.|+++-.. .-+++.+ |+||+.+|=..
T Consensus 82 N~mgy-Da~tlGNHEFd~g~~~l~~l~~~~~----~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt 156 (282)
T cd07407 82 RMMPY-DLLTIGNHELYNYEVADDEYEGFVP----SWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLF 156 (282)
T ss_pred HhcCC-cEEeecccccCccccHHHHHHHHHh----hcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEec
Confidence 22222 368899999741 12232211000 0113478889876431 2234555 99999998653
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.052 Score=61.01 Aligned_cols=113 Identities=18% Similarity=0.068 Sum_probs=62.8
Q ss_pred CCEEEEEcCCCCChHH----------HHHHHHHHhhh---cCCCcEEEEecCCCCCChhh-H---HHHHHHhcccCCCCc
Q 008885 3 PPRILLCGDVLGRLNQ----------LFKRVQSVNKS---AGPFDAVLCVGQFFPDSSEL-L---DEFMNYVEGRSEIPI 65 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~----------l~~kv~~l~~k---~GpfD~li~~GDff~~~~~~-~---~~~~~~l~g~~~~p~ 65 (550)
++.||.+.|+||.+.. +-..++++.++ .++--++|-+||+|...... . .-.-+.+ ..+.+
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~m---N~~g~ 110 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGM---NLIGY 110 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHH---hcCCC
Confidence 4679999999998741 22223333221 24456899999997532110 0 0011222 23333
Q ss_pred cEEEEecCCCChHH--HHHHhhccccccCcccCCceecCcEEEcC-------CCCeEEEcCeEEEEEeCc
Q 008885 66 PTYFIGDYGVGAAK--VLLAASKNSANQGFKMDGFKVTDNLFWLK-------GSGNFTLHGLSVAYLSGR 126 (550)
Q Consensus 66 ptyfv~GNhe~~~~--~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg-------~~gv~~i~GlrIa~lgG~ 126 (550)
- +++.||||.... .+..+-.. ..-..++.|+++-. ..-+++++|+||+.+|=.
T Consensus 111 D-a~tlGNHEFD~G~~~L~~~~~~-------a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~ 172 (551)
T PRK09558 111 D-AMAVGNHEFDNPLSVLRKQEKW-------AKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLT 172 (551)
T ss_pred C-EEcccccccCcCHHHHHHhhcc-------CCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEe
Confidence 3 556699997632 22222111 12347888887642 223446789999999965
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0041 Score=64.13 Aligned_cols=203 Identities=15% Similarity=0.170 Sum_probs=100.8
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHH
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLA 83 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~ 83 (550)
.++.|+||+||++..+...+..... .+-+-+|++||+..-+....+.+.-++.-+...|--++.+-||||.. .+..
T Consensus 50 ~~i~viGDIHG~~~~L~~l~~~~~~--~~~~~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~--~~~~ 125 (293)
T cd07414 50 APLKICGDIHGQYYDLLRLFEYGGF--PPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA--SINR 125 (293)
T ss_pred CceEEEEecCCCHHHHHHHHHhcCC--CCcceEEEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchh--hHhh
Confidence 4699999999999998766654321 24578999999976443333333333322234555689999999963 1211
Q ss_pred hhccccccCccc-----CCce----ecCcEEEcCCCCeE-EEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCC-
Q 008885 84 ASKNSANQGFKM-----DGFK----VTDNLFWLKGSGNF-TLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEP- 152 (550)
Q Consensus 84 l~~~~~~~~~~~-----~g~e----i~~Nl~~Lg~~gv~-~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~- 152 (550)
.. ||.. -+.+ +....-+|. +. .+++..++.=||..+ .. -+.++++.+.......
T Consensus 126 ~~------gf~~e~~~~y~~~l~~~~~~~f~~lP---laa~i~~~i~cvHgGi~p-~~-----~~l~~i~~i~r~~~~~~ 190 (293)
T cd07414 126 IY------GFYDECKRRYNIKLWKTFTDCFNCLP---VAAIIDEKIFCMHGGLSP-DL-----QSMEQIRRIMRPTDVPD 190 (293)
T ss_pred hc------chhhHHHHhhhHHHHHHHHHHHHHhH---HHHhhCCcEEEEccCCCc-cc-----CcHHHHhcccCCCCCCc
Confidence 10 0000 0000 001111111 11 234444444455432 11 1234444433211000
Q ss_pred C--CccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC--CccccccccCCCCcceeEEE
Q 008885 153 G--IVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG--VFYAREPYSNVDAVHVTRFL 228 (550)
Q Consensus 153 ~--~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~--~f~er~Py~~~~~~~~TRFI 228 (550)
. -.|+|-+ +|-..+...... +.+. ....|..++.+++++.+=++.+=||+- ..|+. + .+..-+|-|=
T Consensus 191 ~~~~~dllWs-DP~~~~~~~~~~---~Rg~-g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~--~--~~~~~iTvfS 261 (293)
T cd07414 191 QGLLCDLLWS-DPDKDVQGWGEN---DRGV-SFTFGKDVVAKFLNKHDLDLICRAHQVVEDGYEF--F--AKRQLVTLFS 261 (293)
T ss_pred hhhHhhhhcc-CcccccCCCccC---CCCc-ceecCHHHHHHHHHHcCCeEEEECCccccCeEEE--e--CCCcEEEEec
Confidence 0 1233322 221112111110 1111 124689999999999999999999953 35653 1 1234578887
Q ss_pred EcCCCC
Q 008885 229 GLAPVG 234 (550)
Q Consensus 229 ~La~~g 234 (550)
+..-+|
T Consensus 262 a~~Y~~ 267 (293)
T cd07414 262 APNYCG 267 (293)
T ss_pred CCcccC
Confidence 666555
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0043 Score=63.74 Aligned_cols=205 Identities=14% Similarity=0.115 Sum_probs=101.5
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChH-----
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAA----- 78 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~----- 78 (550)
.++.|+||+||++..+...+..... .+-+-+|++||+..-+....+.+.-++.-+...|-.++++-||||...
T Consensus 42 ~~i~vvGDIHG~~~dL~~ll~~~~~--~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~y 119 (285)
T cd07415 42 SPVTVCGDIHGQFYDLLELFRVGGD--PPDTNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVY 119 (285)
T ss_pred CCEEEEEeCCCCHHHHHHHHHHcCC--CCCCeEEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhc
Confidence 4689999999999998765544321 245789999999764433333332222212345667999999999631
Q ss_pred HHHHHhhccccccCcccCC--ceecCcEEEcCCCCeE-EEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCC---
Q 008885 79 KVLLAASKNSANQGFKMDG--FKVTDNLFWLKGSGNF-TLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEP--- 152 (550)
Q Consensus 79 ~~l~~l~~~~~~~~~~~~g--~ei~~Nl~~Lg~~gv~-~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~--- 152 (550)
.+.++... .+ + ... ..+.....+|. +. .+++..++.=||. ++... +.++++.+.......
T Consensus 120 gf~~e~~~-~y--~--~~~l~~~~~~~f~~lP---laaii~~~i~cvHgGi-~p~~~-----~~~~i~~i~r~~~~~~~~ 185 (285)
T cd07415 120 GFYDECLR-KY--G--NANVWKYCTDLFDYLP---LAALIDNQIFCVHGGL-SPSID-----TLDQIRAIDRFQEVPHEG 185 (285)
T ss_pred chhHHHHH-hc--C--chHHHHHHHHHHHHhH---HHhEeCCeEEEEcCCC-CCCcc-----cHHHhhcccCCCCCCCCC
Confidence 01111100 00 0 000 00001111111 11 2345334433444 22111 234444443321111
Q ss_pred CCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC--CccccccccCCCCcceeEEEEc
Q 008885 153 GIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG--VFYAREPYSNVDAVHVTRFLGL 230 (550)
Q Consensus 153 ~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~--~f~er~Py~~~~~~~~TRFI~L 230 (550)
--.|+|-+ +|-.. ..... .+.+. ....|..++.+++++..-++.+=||+- ..|+.. + +..-+|-|=+.
T Consensus 186 ~~~dllWs-DP~~~-~~~~~---~~Rg~-g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~-~---~~~~~TvfSa~ 255 (285)
T cd07415 186 PMCDLLWS-DPDDI-EGWGI---SPRGA-GYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQWM-F---DDKLVTVWSAP 255 (285)
T ss_pred CccceEec-CCCcc-CCCCc---CCCCC-ccccCHHHHHHHHHHCCCeEEEEcCccccceEEEe-c---CCcEEEEecCC
Confidence 12455444 22211 11111 11121 124689999999999999999999953 355532 2 13457888766
Q ss_pred CCCC
Q 008885 231 APVG 234 (550)
Q Consensus 231 a~~g 234 (550)
.-++
T Consensus 256 ~y~~ 259 (285)
T cd07415 256 NYCY 259 (285)
T ss_pred cccC
Confidence 5553
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0051 Score=63.70 Aligned_cols=206 Identities=13% Similarity=0.074 Sum_probs=102.6
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHH----
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK---- 79 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~---- 79 (550)
..+.|+||+||++..+...+..+.. -+-+-+|++||+..-+....+.+.-++.-+...|--++++-||||...-
T Consensus 43 ~~i~vvGDIHG~~~~L~~l~~~~~~--~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~ 120 (303)
T PTZ00239 43 APVNVCGDIHGQFYDLQALFKEGGD--IPNANYIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVY 120 (303)
T ss_pred CCEEEEEeCCCCHHHHHHHHHhcCC--CCCceEEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhc
Confidence 3589999999999998766654321 1457899999996544333333333332223445568999999996310
Q ss_pred -HHHHhhccccccCcccCCc--eecCcEEEcCCCCeE-EEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCC---
Q 008885 80 -VLLAASKNSANQGFKMDGF--KVTDNLFWLKGSGNF-TLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEP--- 152 (550)
Q Consensus 80 -~l~~l~~~~~~~~~~~~g~--ei~~Nl~~Lg~~gv~-~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~--- 152 (550)
+.++... .+ + .... .+.....+|. +. .+++..++.=||..+. .. +.++++.+.......
T Consensus 121 gf~~e~~~-ky--~--~~~~~~~~~~~f~~LP---laaii~~~i~cvHgGi~p~-~~-----~l~~i~~i~r~~~~~~~~ 186 (303)
T PTZ00239 121 GFYEEILR-KY--G--NSNPWRLFMDVFDCLP---LAALIEGQILCVHGGLSPD-MR-----TIDQIRTIDRKIEIPHEG 186 (303)
T ss_pred ChHHHHHH-Hh--c--ChhHHHHHHHHHHhCc---hheEEcCeEEEEcCccCcc-cc-----cHhhhccccCCCCCCCCC
Confidence 1111110 00 0 0000 0011111222 11 2456555555565321 11 233344433211110
Q ss_pred CCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC--CccccccccCCCCcceeEEEEc
Q 008885 153 GIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG--VFYAREPYSNVDAVHVTRFLGL 230 (550)
Q Consensus 153 ~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~--~f~er~Py~~~~~~~~TRFI~L 230 (550)
--.|+|-+ +|. ....... .+.+. ....|..++.+++++.+=++.+=||+- ..|+.. |. +..-+|-|=+.
T Consensus 187 ~~~dllWs-DP~-~~~~~~~---~~Rg~-g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~-~~--~~~~iTvfSa~ 257 (303)
T PTZ00239 187 PFCDLMWS-DPE-EVEYWAV---NSRGA-GYLFGAKVTKEFCRLNDLTLICRAHQLVMEGYKYW-FP--DQNLVTVWSAP 257 (303)
T ss_pred CceeeEec-Ccc-ccCCCcc---CCCCC-ccccCHHHHHHHHHHCCCcEEEEcChhhccceEEE-eC--CCeEEEEECCC
Confidence 11354433 221 1111111 01121 124789999999999999999999953 255531 21 12347888766
Q ss_pred CCCC
Q 008885 231 APVG 234 (550)
Q Consensus 231 a~~g 234 (550)
.-++
T Consensus 258 ~Y~~ 261 (303)
T PTZ00239 258 NYCY 261 (303)
T ss_pred cccC
Confidence 5543
|
|
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.12 Score=53.10 Aligned_cols=175 Identities=11% Similarity=0.042 Sum_probs=87.2
Q ss_pred HHHHHHHHhhhcCCCcEEEEecCCCCCChh-----h-----HHHHHHHhcccCCCCccEEEEecCCCChHH---------
Q 008885 19 LFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-----L-----LDEFMNYVEGRSEIPIPTYFIGDYGVGAAK--------- 79 (550)
Q Consensus 19 l~~kv~~l~~k~GpfD~li~~GDff~~~~~-----~-----~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~--------- 79 (550)
+-+.++.+.+...++|+||+.||+...... . ...+.+.+.. .-..+|+|++.||||..+.
T Consensus 55 ~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~pv~~~~GNHD~~p~~~~~~~~~~ 133 (296)
T cd00842 55 VESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKK-AFPDTPVYPALGNHDSYPVNQFPPNNSP 133 (296)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHH-hCCCCCEEEcCCCCCCCcccccCCcccc
Confidence 333455555444678999999999654211 0 1122222211 1246899999999986421
Q ss_pred --HHHHhhccccccCcccCCceecCc--EEEcCCCCeE--E-EcCeEEEEEeCccCCCCCC-----CCCCCHHHHHHHHH
Q 008885 80 --VLLAASKNSANQGFKMDGFKVTDN--LFWLKGSGNF--T-LHGLSVAYLSGRQSSEGQQ-----FGTYSQDDVDALRA 147 (550)
Q Consensus 80 --~l~~l~~~~~~~~~~~~g~ei~~N--l~~Lg~~gv~--~-i~GlrIa~lgG~~~~~~~~-----~~~~te~di~~L~~ 147 (550)
.++.+.. .|. .++..+ -.+. ++|-+ . ..|++|.+|.-..-..... ......++++-|++
T Consensus 134 ~~~~~~~~~-~w~-------~~l~~~~~~~~~-~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~ 204 (296)
T cd00842 134 SWLYDALAE-LWK-------SWLPEEAEETFK-KGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLED 204 (296)
T ss_pred cHHHHHHHH-HHH-------hhcCHHHHHHhh-cceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHH
Confidence 1222210 010 000000 0011 12323 3 4688888886543211110 01112334443433
Q ss_pred h-h--cCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhC--CCEEEEccCCCccccc
Q 008885 148 L-A--EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIK--PRYHIAGSKGVFYARE 214 (550)
Q Consensus 148 l-~--~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lk--PRYhf~Gh~~~f~er~ 214 (550)
. . +....-=|++.|.||...... . .......+.+|+++.+ ....|+||.|...-+.
T Consensus 205 ~L~~a~~~~~~v~I~~HiPp~~~~~~-~----------~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~ 265 (296)
T cd00842 205 ELQEAEQAGEKVWIIGHIPPGVNSYD-T----------LENWSERYLQIINRYSDTIAGQFFGHTHRDEFRV 265 (296)
T ss_pred HHHHHHHCCCeEEEEeccCCCCcccc-c----------chHHHHHHHHHHHHHHHhhheeeecccccceEEE
Confidence 1 1 111222368899988653210 0 0134677888898887 7889999988644443
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0054 Score=63.88 Aligned_cols=211 Identities=14% Similarity=0.162 Sum_probs=102.7
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHH
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLA 83 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~ 83 (550)
.++.|+||+||++..+...+....-. .+-|-+|.+||+..-+....+.+.-++.=+...|--++.+-||||.. .+..
T Consensus 60 ~~~~VvGDIHG~~~dL~~ll~~~g~~-~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~--~~~~ 136 (316)
T cd07417 60 EKITVCGDTHGQFYDLLNIFELNGLP-SETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETD--NMNK 136 (316)
T ss_pred ceeEEeecccCCHHHHHHHHHhcCCC-CccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchH--HHHH
Confidence 46999999999999987655433211 12268999999975444333333333221233455588999999963 2221
Q ss_pred hhc--cccccCcccCC-ceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCC---CCccE
Q 008885 84 ASK--NSANQGFKMDG-FKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEP---GIVDL 157 (550)
Q Consensus 84 l~~--~~~~~~~~~~g-~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~---~~vDI 157 (550)
... .+....+...- ..+...+.+|.-.- .+++..++.=||..+.. ..+-++++.+....... --.|+
T Consensus 137 ~~gf~~e~~~k~~~~l~~~~~~~f~~LPlaa--ii~~~~~~vHgGi~~~~-----~~~l~~i~~i~r~~~~~~~~~~~dl 209 (316)
T cd07417 137 MYGFEGEVKAKYNEQMFDLFSEVFNWLPLAH--LINGKVLVVHGGLFSDD-----GVTLDDIRKIDRFRQPPDSGLMCEL 209 (316)
T ss_pred HhhhcchhhhcccHHHHHHHHHHHHhchHhh--eeCCeEEEEccccccCC-----CccHHHhhcccCCCCCCccccceee
Confidence 110 00000000000 00111111221111 24454455555653321 12344444443321110 11343
Q ss_pred EEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC--CccccccccCCCCcceeEEEEcCCCC
Q 008885 158 FLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG--VFYAREPYSNVDAVHVTRFLGLAPVG 234 (550)
Q Consensus 158 LLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~--~f~er~Py~~~~~~~~TRFI~La~~g 234 (550)
|-+ +|-. ...... .+.+.. ...|.+++.+++++..=++.+-||+- ..|+.. + +..-+|-|=+..-+|
T Consensus 210 lWs-DP~~-~~~~~~---s~Rg~g-~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~-~---~~~~~TvfSa~~Y~~ 278 (316)
T cd07417 210 LWS-DPQP-QPGRSP---SKRGVG-CQFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVE-H---DGKCITVFSAPNYCD 278 (316)
T ss_pred eec-CCCC-CCCCCc---cCCCCc-eEeCHHHHHHHHHHcCCcEEEECCcccceeEEEe-c---CCeEEEEeCCccccC
Confidence 333 2211 111111 111111 24689999999999999999999963 356632 1 235578887665544
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0067 Score=63.17 Aligned_cols=205 Identities=16% Similarity=0.150 Sum_probs=103.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHH
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLA 83 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~ 83 (550)
.+|.|+||+||++..+...+..... .+-+-.|++||+..-+....+.+.-++.-+...|-.++.+-||||.. .+..
T Consensus 59 ~~i~vvGDIHG~~~dL~~l~~~~g~--~~~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~--~~~~ 134 (320)
T PTZ00480 59 APLKICGDVHGQYFDLLRLFEYGGY--PPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA--SINR 134 (320)
T ss_pred CCeEEEeecccCHHHHHHHHHhcCC--CCcceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchh--hhhh
Confidence 4699999999999998765543221 14577889999975443333333333322244566689999999963 1111
Q ss_pred hhccccccCccc-----CCce----ecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCC--
Q 008885 84 ASKNSANQGFKM-----DGFK----VTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEP-- 152 (550)
Q Consensus 84 l~~~~~~~~~~~-----~g~e----i~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~-- 152 (550)
.. ||.. -+.+ +.....+|.=.- .+++..+..=||+.+ ... +-++++.+..-....
T Consensus 135 ~y------gF~~e~~~~y~~~l~~~~~~~F~~LPlaA--iI~~~i~cvHGGI~p-~~~-----~l~~i~~i~rp~~~~~~ 200 (320)
T PTZ00480 135 IY------GFYDECKRRYTIKLWKTFTDCFNCLPVAA--LIDEKILCMHGGLSP-ELS-----NLEQIRRIMRPTDVPDT 200 (320)
T ss_pred hc------chHHHHHhhcCHHHHHHHHHHHHhccHhh--eecCcEEEEcCCcCc-ccC-----CHHHHhcccCCCCCCcc
Confidence 10 0000 0000 001111111101 245544555555532 111 233343333211000
Q ss_pred -CCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC--CccccccccCCCCcceeEEEE
Q 008885 153 -GIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG--VFYAREPYSNVDAVHVTRFLG 229 (550)
Q Consensus 153 -~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~--~f~er~Py~~~~~~~~TRFI~ 229 (550)
--.|+|-+ +|-..+..... .+.+. ....|..++.+++++..-.+.+=||+- ..|+.. .+..-+|-|=+
T Consensus 201 ~~~~dllWS-DP~~~~~~~~~---s~RG~-g~~FG~~~~~~Fl~~n~l~~IiR~Hq~v~~G~~~~----~~~~~iTvFSa 271 (320)
T PTZ00480 201 GLLCDLLWS-DPDKDVQGWAD---NERGV-SYVFSQEIVQVFLKKHELDLICRAHQVVEDGYEFF----SKRQLVTLFSA 271 (320)
T ss_pred chhhheeec-CcccccCCCcc---CCCCC-ccccCHHHHHHHHHhCCCcEEEEcCccccCceEEe----CCCcEEEEeCC
Confidence 01344433 22222211111 01121 124799999999999999999999953 355531 12456888887
Q ss_pred cCCCCC
Q 008885 230 LAPVGN 235 (550)
Q Consensus 230 La~~g~ 235 (550)
..-+|.
T Consensus 272 ~~Y~~~ 277 (320)
T PTZ00480 272 PNYCGE 277 (320)
T ss_pred cccCCC
Confidence 766654
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0053 Score=63.33 Aligned_cols=206 Identities=13% Similarity=0.138 Sum_probs=102.2
Q ss_pred EEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHH-----
Q 008885 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK----- 79 (550)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~----- 79 (550)
.+.|+||+||++..+...++.+.. .+.|-++++||+..-+....+.+.-++.-+...|-.++.+-||||...-
T Consensus 53 p~~ViGDIHG~~~~L~~l~~~~~~--~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g 130 (294)
T PTZ00244 53 PVRVCGDTHGQYYDLLRIFEKCGF--PPYSNYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYG 130 (294)
T ss_pred CceeeccCCCCHHHHHHHHHHcCC--CCcccEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccC
Confidence 488999999999998766655422 2567888999996644433333332222123346679999999996310
Q ss_pred HHHHhhccccccCcccC-CceecCcEEEcCCCCeE-EEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCC-C--C
Q 008885 80 VLLAASKNSANQGFKMD-GFKVTDNLFWLKGSGNF-TLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEP-G--I 154 (550)
Q Consensus 80 ~l~~l~~~~~~~~~~~~-g~ei~~Nl~~Lg~~gv~-~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~-~--~ 154 (550)
+.++... .+ ... -..+.....+|. +. .+++-.+..=||..+. . -+.++++.+..-.... . -
T Consensus 131 f~~e~~~-~y----~~~l~~~~~~~f~~lP---laaii~~~il~vHgGi~p~-~-----~~l~~i~~i~rp~~~~~~~~~ 196 (294)
T PTZ00244 131 FFDDVKR-RY----NIKLFKAFTDVFNTMP---VCCVISEKIICMHGGLSPD-L-----TSLASVNEIERPCDVPDRGIL 196 (294)
T ss_pred hHHHHHH-Hh----hHHHHHHHHHHHHhCc---hheEecCeeEEEcCCCCch-h-----hHHHHhhhhccccCCCccchh
Confidence 1111110 00 000 000111111111 11 2344444444554321 0 0223333333211100 1 1
Q ss_pred ccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC--CccccccccCCCCcceeEEEEcCC
Q 008885 155 VDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG--VFYAREPYSNVDAVHVTRFLGLAP 232 (550)
Q Consensus 155 vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~--~f~er~Py~~~~~~~~TRFI~La~ 232 (550)
.|+|-+ +|-..+..... .+.+.. ...|.+++.+++++..-++.+=||+- ..|+. . .+..-+|-|=+..-
T Consensus 197 ~dllWs-DP~~~~~~~~~---~~Rg~g-~~fg~~~~~~Fl~~n~l~~iiR~Hq~~~~G~~~---~-~~~~~iTvfSa~~Y 267 (294)
T PTZ00244 197 CDLLWA-DPEDEVRGFLE---SDRGVS-YLFGEDIVNDFLDMVDMDLIVRAHQVMERGYGF---F-ASRQLVTVFSAPNY 267 (294)
T ss_pred heeeec-CcccccCCCCc---CCCCCc-cccCHHHHHHHHHHcCCcEEEEcCccccCceEE---c-CCCeEEEEeCCccc
Confidence 344433 22111111111 111211 35799999999999999999999963 35552 1 22456788876665
Q ss_pred CCC
Q 008885 233 VGN 235 (550)
Q Consensus 233 ~g~ 235 (550)
+|.
T Consensus 268 ~~~ 270 (294)
T PTZ00244 268 CGE 270 (294)
T ss_pred cCC
Confidence 543
|
|
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0079 Score=63.87 Aligned_cols=73 Identities=14% Similarity=0.231 Sum_probs=46.2
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
.+|+|+||+||++..+...++...-. .+-+.+|++||+..-+....+-+.-++.-+...|--+|.+-||||..
T Consensus 66 ~~i~VvGDIHG~~~dL~~ll~~~g~~-~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~ 138 (377)
T cd07418 66 CEVVVVGDVHGQLHDVLFLLEDAGFP-DQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESK 138 (377)
T ss_pred CCEEEEEecCCCHHHHHHHHHHhCCC-CCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccc
Confidence 46899999999999987666542211 11246899999965433333333322221234556689999999963
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.13 Score=56.18 Aligned_cols=130 Identities=14% Similarity=0.117 Sum_probs=69.1
Q ss_pred EcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHH-hhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHH
Q 008885 115 LHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA-LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSEL 193 (550)
Q Consensus 115 i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~-l~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l 193 (550)
.+|++|..|--.... ......+.+++++-|++ |+.....-=|+++|.+|-.+.........+ + ........+.++
T Consensus 299 ~ggvrfIvLDSt~~~-G~~~G~L~eeQL~WLeqeLa~a~~k~VVVf~HHPp~s~g~~~~Dp~~p-g--~~~~n~~eLldL 374 (496)
T TIGR03767 299 AGGVRGISMDTTNRA-GGDEGSLGQTQFKWIKDTLRASSDTLFVLFSHHTSWSMVNELTDPVDP-G--EKRHLGTELVSL 374 (496)
T ss_pred ECCEEEEEEeCCCcC-CCcCCccCHHHHHHHHHHHhcCCCCCEEEEECCCCccccccccccccc-c--ccccCHHHHHHH
Confidence 356777766544221 11234567777777775 333334456888999886542211100001 0 012234567777
Q ss_pred HHHh-CCCEEEEccCCCcccccccc-----------CC-------CCcceeEEEEcCCCCCcccceeEEEeccCCCC
Q 008885 194 VAEI-KPRYHIAGSKGVFYAREPYS-----------NV-------DAVHVTRFLGLAPVGNKEKQKFIHALSPTPAA 251 (550)
Q Consensus 194 ~~~l-kPRYhf~Gh~~~f~er~Py~-----------~~-------~~~~~TRFI~La~~g~~~K~Kw~yAf~i~p~~ 251 (550)
++.. +-+.+|+||.|..... ++. |+ +-.+.=|.|-+.. |.+..-++.+-+|+-++
T Consensus 375 L~~ypnV~aVfsGHvH~n~i~-~~~~~~~~~p~~gfweI~TaSlvdfPq~~Ri~Ei~~--n~dgt~si~tt~vd~~~ 448 (496)
T TIGR03767 375 LLEHPNVLAWVNGHTHSNKIT-AHRRVEGVGKDKGFWEINTASHIDFPQQGRIIELAD--NQDGTVSIFTTLIESAA 448 (496)
T ss_pred HhcCCCceEEEECCcCCCccc-cccCCCCCCCcCCeEEEeccccccCCCCceEEEEEe--CCCCcEEEEEEecccCC
Confidence 7776 6788999997743311 111 11 1234556666653 33456688888876444
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.011 Score=55.06 Aligned_cols=44 Identities=14% Similarity=0.137 Sum_probs=26.9
Q ss_pred CCcEEEEecCCCCCChh-hHHH----HHHHhcccC-CCCccEEEEecCCC
Q 008885 32 PFDAVLCVGQFFPDSSE-LLDE----FMNYVEGRS-EIPIPTYFIGDYGV 75 (550)
Q Consensus 32 pfD~li~~GDff~~~~~-~~~~----~~~~l~g~~-~~p~ptyfv~GNhe 75 (550)
+.|+||++||++..... ...+ +..+..-.. ...+|+|+|.||||
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD 87 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHD 87 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCC
Confidence 57999999999864221 1111 222321111 23689999999997
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.016 Score=60.29 Aligned_cols=73 Identities=18% Similarity=0.304 Sum_probs=44.9
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhh----cCC--CcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKS----AGP--FDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k----~Gp--fD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
..+.|+||+||++..+...++.+.-. .|. ..-+|++||+..-+....+.+.-++.-+...|--+|.+-||||.
T Consensus 48 ~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~ 126 (311)
T cd07419 48 APIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHED 126 (311)
T ss_pred CCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccch
Confidence 35899999999999987766554211 111 12478999996543332333332221123445668999999996
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.046 Score=55.57 Aligned_cols=70 Identities=14% Similarity=0.108 Sum_probs=45.2
Q ss_pred CEEEEEcCCCCC--hHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhcccCCCCccEEEEecCCCChHH
Q 008885 4 PRILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK 79 (550)
Q Consensus 4 ~KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~-~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~ 79 (550)
||||++||+=|+ ...+-+.+..+.+++ +.|++|+-||.....- -..+....+ .+.++-++- .|||..+..
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~-~~D~vIaNgEn~~gG~Gi~~~~~~~L----~~~GvDviT-~GNH~~Dkg 73 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKY-QADLVIANGENTTHGKGLTLKIYEFL----KQSGVNYIT-MGNHTWFQK 73 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhC-CCCEEEEcCcccCCCCCCCHHHHHHH----HhcCCCEEE-ccchhccCc
Confidence 799999999999 455566677776666 5899999999853210 112223333 334455444 479987643
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >COG1085 GalT Galactose-1-phosphate uridylyltransferase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.024 Score=58.97 Aligned_cols=97 Identities=23% Similarity=0.291 Sum_probs=71.3
Q ss_pred CCCcccCCC--CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhhc-C--
Q 008885 389 KECWFCLSS--PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ-G-- 463 (550)
Q Consensus 389 ~~C~FC~~~--~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~-~-- 463 (550)
..|.||..- ..-.+.+||..+++.-++.|=...-|-+++|+|.+|+..+.++++++.++|-...+.+...|.+. +
T Consensus 185 ~~~~~~~~ve~E~~~~~R~v~e~~~~~a~~Pf~a~~pfEv~i~pk~hv~~l~~~sdee~~~lA~ilk~~~~~y~~~~~~~ 264 (338)
T COG1085 185 GSCMYCDLVEREKGDGERIVVENDHFLAFVPFWARWPFEVLIYPKEHVSFLTDLSDEELKDLAEILKKLLARYDNLFGNS 264 (338)
T ss_pred CCchHHHHHHHHhccCceEEecCceeEEeccccccCceEEEeccHHHhhhhhhCCHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 479999764 23334578877777666666677889999999999999999999999999998888877776642 2
Q ss_pred --CceEEEe-ecC--CCcCeEEEEEee
Q 008885 464 --KEAVFFE-WLS--KRGTHANLQAVP 485 (550)
Q Consensus 464 --~~~v~~E-~~~--~~~~H~hi~~vP 485 (550)
+...|.- ..+ ....|+|++++|
T Consensus 265 fpY~m~~h~ap~~~~~~~~~~h~~~~p 291 (338)
T COG1085 265 FPYSMGFHQAPFNEVNEHYHLHAEIYP 291 (338)
T ss_pred CceeeeeecCCCCcccccceEEEEEcc
Confidence 3334443 112 224699999998
|
|
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.2 Score=50.68 Aligned_cols=109 Identities=14% Similarity=0.139 Sum_probs=61.0
Q ss_pred EEEEEcCCCCC--hHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHH-HH
Q 008885 5 RILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK-VL 81 (550)
Q Consensus 5 KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~-~l 81 (550)
|||++||+=|+ ...+.+.|.++.++. +.|++|.-||.............+.| ..+++- +++.|||+.+.. ++
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~-~~D~vi~NgEn~~gg~gl~~~~~~~L---~~~G~D-~iTlGNH~fD~gel~ 75 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEY-KIDFVIANGENAAGGKGITPKIAKEL---LSAGVD-VITMGNHTWDKKEIL 75 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHC-CCCEEEECCccccCCCCCCHHHHHHH---HhcCCC-EEEecccccCcchHH
Confidence 69999999997 445566677776666 58999999998432111112223333 334444 455589987644 33
Q ss_pred HHhhccccccCcccCCceecCcEEE--cCC-CCeEEEcCeEEEEEeCc
Q 008885 82 LAASKNSANQGFKMDGFKVTDNLFW--LKG-SGNFTLHGLSVAYLSGR 126 (550)
Q Consensus 82 ~~l~~~~~~~~~~~~g~ei~~Nl~~--Lg~-~gv~~i~GlrIa~lgG~ 126 (550)
+.+... .-...+-|+.. .++ ..+++.+|++|+.+|=.
T Consensus 76 ~~l~~~--------~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~ 115 (255)
T cd07382 76 DFIDEE--------PRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLM 115 (255)
T ss_pred HHHhcC--------cCceEeeecCCCCCCCCeEEEEECCEEEEEEEEe
Confidence 333211 00011223211 122 23456789999988743
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.022 Score=53.85 Aligned_cols=58 Identities=10% Similarity=0.086 Sum_probs=34.5
Q ss_pred HHHHHHHHHhhhcCCCcEEEEecCCCCCChh-hHHHHHHH-hcccCCCCccEEEEecCCCC
Q 008885 18 QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-LLDEFMNY-VEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 18 ~l~~kv~~l~~k~GpfD~li~~GDff~~~~~-~~~~~~~~-l~g~~~~p~ptyfv~GNhe~ 76 (550)
+.++++.++..+. +.|.||++||++..... ....+... +.......+++++|.||||.
T Consensus 28 ~~~~~l~~~~~~~-~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~ 87 (172)
T cd07391 28 DTLERLDRLIEEY-GPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDG 87 (172)
T ss_pred HHHHHHHHHHHhc-CCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCcc
Confidence 4556666655554 47999999999843111 11111110 11124567899999999985
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.12 Score=47.28 Aligned_cols=111 Identities=20% Similarity=0.276 Sum_probs=66.8
Q ss_pred CEEEEEcCCCC--ChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHH
Q 008885 4 PRILLCGDVLG--RLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVL 81 (550)
Q Consensus 4 ~KILv~GDvhG--~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l 81 (550)
|-+|++||.|= +-..|-.|.+++. --|++.-++|.|.+.. .+..+|+ +.+.--+-+|-|.-+
T Consensus 1 mLvL~lgD~HiP~Ra~~Lp~KFkklL-vPgki~hilctGNlcs------~e~~dyl---k~l~~dvhiVrGeFD------ 64 (183)
T KOG3325|consen 1 MLVLVLGDLHIPHRANDLPAKFKKLL-VPGKIQHILCTGNLCS------KESYDYL---KTLSSDVHIVRGEFD------ 64 (183)
T ss_pred CEEEEeccccCCccccccCHHHHhcc-CCCceeEEEEeCCcch------HHHHHHH---HhhCCCcEEEecccC------
Confidence 45899999985 2333333333333 2468899999999765 3566776 334334555666322
Q ss_pred HHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEe
Q 008885 82 LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLT 160 (550)
Q Consensus 82 ~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLT 160 (550)
+|+.|-. .++++++-+||+...|-.-.+.. +.+.+..|.. .-+||||||
T Consensus 65 --------------------~~~~yP~-~kvvtvGqfkIG~chGhqViP~g-----d~~sL~~LaR----qldvDILl~ 113 (183)
T KOG3325|consen 65 --------------------ENLKYPE-NKVVTVGQFKIGLCHGHQVIPWG-----DPESLALLAR----QLDVDILLT 113 (183)
T ss_pred --------------------ccccCCc-cceEEeccEEEEeecCcEeecCC-----CHHHHHHHHH----hcCCcEEEe
Confidence 2222332 46789999999999997543332 2333333332 247999997
|
|
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.04 Score=55.30 Aligned_cols=206 Identities=13% Similarity=0.121 Sum_probs=113.3
Q ss_pred CCEEEEEcCC--CCChHHHHH--HHHHHhhhcCCCcEEEEecCCCC---C----ChhhHHHHHHHhcccCCCCccEEEEe
Q 008885 3 PPRILLCGDV--LGRLNQLFK--RVQSVNKSAGPFDAVLCVGQFFP---D----SSELLDEFMNYVEGRSEIPIPTYFIG 71 (550)
Q Consensus 3 ~~KILv~GDv--hG~~~~l~~--kv~~l~~k~GpfD~li~~GDff~---~----~~~~~~~~~~~l~g~~~~p~ptyfv~ 71 (550)
.+++||+||. +|.|.+--. ...+|.+|. .+|+||-+||=|- . ++.-.+.|+..++. ..+-.|-|-|.
T Consensus 43 slsflvvGDwGr~g~~nqs~va~qmg~ige~l-~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~-pSLQkpWy~vl 120 (336)
T KOG2679|consen 43 SLSFLVVGDWGRRGSFNQSQVALQMGEIGEKL-DIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTA-PSLQKPWYSVL 120 (336)
T ss_pred ceEEEEEcccccCCchhHHHHHHHHHhHHHhc-cceEEEecCCcccccCCCCCCChhHHhhhhhcccC-cccccchhhhc
Confidence 4689999997 454544322 233344455 5999999999432 1 22233456666654 44667999999
Q ss_pred cCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEe--Ccc-CCC-CCCCC------CCCHHH
Q 008885 72 DYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLS--GRQ-SSE-GQQFG------TYSQDD 141 (550)
Q Consensus 72 GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lg--G~~-~~~-~~~~~------~~te~d 141 (550)
|||+---++.++++.--. ..+..|+|+..+|+.. -++++-+..+.-+. -.. .++ ...|. .|....
T Consensus 121 GNHDyrGnV~AQls~~l~----~~d~RW~c~rsf~~~a-e~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v~PR~~~~~~~ 195 (336)
T KOG2679|consen 121 GNHDYRGNVEAQLSPVLR----KIDKRWICPRSFYVDA-EIVEMFFVDTTPFMDDTFTLCTDDVYDWRGVLPRVKYLRAL 195 (336)
T ss_pred cCccccCchhhhhhHHHH----hhccceecccHHhhcc-eeeeeeccccccchhhheecccccccccccCChHHHHHHHH
Confidence 999854444444431000 1346799999888873 44444332222221 110 110 01111 111111
Q ss_pred HHHHHH-hhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCC--ccccccccC
Q 008885 142 VDALRA-LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGV--FYAREPYSN 218 (550)
Q Consensus 142 i~~L~~-l~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~--f~er~Py~~ 218 (550)
..-|+. +.+...+--|++-|-+-..+...++. ..--+.+.-|+++.+-...++||.|+ ++..
T Consensus 196 l~~le~~L~~S~a~wkiVvGHh~i~S~~~HG~T----------~eL~~~LlPiL~~n~VdlY~nGHDHcLQhis~----- 260 (336)
T KOG2679|consen 196 LSWLEVALKASRAKWKIVVGHHPIKSAGHHGPT----------KELEKQLLPILEANGVDLYINGHDHCLQHISS----- 260 (336)
T ss_pred HHHHHHHHHHhhcceEEEecccceehhhccCCh----------HHHHHHHHHHHHhcCCcEEEecchhhhhhccC-----
Confidence 111221 22234456678888877776554431 12244677788899999999999664 3331
Q ss_pred CCCcceeEEEEcCC
Q 008885 219 VDAVHVTRFLGLAP 232 (550)
Q Consensus 219 ~~~~~~TRFI~La~ 232 (550)
....+.|+--|.
T Consensus 261 --~e~~iqf~tSGa 272 (336)
T KOG2679|consen 261 --PESGIQFVTSGA 272 (336)
T ss_pred --CCCCeeEEeeCC
Confidence 255688886553
|
|
| >KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.035 Score=55.17 Aligned_cols=69 Identities=16% Similarity=0.277 Sum_probs=47.0
Q ss_pred EEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 6 ILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 6 ILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
+.||||+||+|+.+++.. ++-.. +|----|..||+..-++...+.+.-+++=+.+-|--+-++.||||.
T Consensus 62 vtvcGDvHGqf~dl~ELf-kiGG~-~pdtnylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEs 130 (319)
T KOG0371|consen 62 VTVCGDVHGQFHDLIELF-KIGGL-APDTNYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHES 130 (319)
T ss_pred eEEecCcchhHHHHHHHH-HccCC-CCCcceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHH
Confidence 789999999999998766 33322 2445677899997654443444444444334455558999999984
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.028 Score=53.32 Aligned_cols=57 Identities=18% Similarity=0.214 Sum_probs=32.9
Q ss_pred HHHHHHHHhhhcCCCcEEEEecCCCCCChh----h----HHHHHHHhcccCC--CCccEEEEecCCCC
Q 008885 19 LFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----L----LDEFMNYVEGRSE--IPIPTYFIGDYGVG 76 (550)
Q Consensus 19 l~~kv~~l~~k~GpfD~li~~GDff~~~~~----~----~~~~~~~l~g~~~--~p~ptyfv~GNhe~ 76 (550)
+.+++..+..+. +.|+||++||+|..... . .+.|..++..... ..+|+|+|+||||.
T Consensus 33 ~~~~~~~~i~~~-~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~ 99 (171)
T cd07384 33 MRRAFKTALQRL-KPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDI 99 (171)
T ss_pred HHHHHHHHHHhc-CCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCcccc
Confidence 334455554444 57999999999864321 1 1122233221110 26899999999973
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.064 Score=58.41 Aligned_cols=75 Identities=20% Similarity=0.291 Sum_probs=50.0
Q ss_pred CCEEEEEcCCCC------------ChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChh-------hHH------------
Q 008885 3 PPRILLCGDVLG------------RLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-------LLD------------ 51 (550)
Q Consensus 3 ~~KILv~GDvhG------------~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~-------~~~------------ 51 (550)
.+||||..|+|- .|..+-+ |-.|...+ ..|+|+.-||+|-.... ..+
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeE-Il~iA~e~-~VDmiLlGGDLFHeNkPSr~~L~~~i~lLRryClgdkP~ 90 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEE-ILEIAQEN-DVDMILLGGDLFHENKPSRKTLHRCLELLRRYCLGDKPV 90 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHH-HHHHHHhc-CCcEEEecCcccccCCccHHHHHHHHHHHHHHccCCCce
Confidence 489999999995 3433322 33333333 69999999999975211 111
Q ss_pred -----------------HHHHHhcccCCCCccEEEEecCCCChHH
Q 008885 52 -----------------EFMNYVEGRSEIPIPTYFIGDYGVGAAK 79 (550)
Q Consensus 52 -----------------~~~~~l~g~~~~p~ptyfv~GNhe~~~~ 79 (550)
....|.+....+.+|++=|.|||+++..
T Consensus 91 ~le~lSD~s~~f~~~~f~~VNY~DpNlNIsIPVFsIHGNHDDpSG 135 (646)
T KOG2310|consen 91 QLEILSDQSVNFGNSVFGNVNYEDPNLNISIPVFSIHGNHDDPSG 135 (646)
T ss_pred eeEEecccceeccccccceecccCCCcceeeeeEEeecCCCCCcc
Confidence 1123555667788999999999999853
|
|
| >PF02744 GalP_UDP_tr_C: Galactose-1-phosphate uridyl transferase, C-terminal domain; InterPro: IPR005850 Galactose-1-phosphate uridyl transferase catalyses the conversion of UDP-glucose and alpha-D-galactose 1-phosphate to alpha-D-glucose 1-phosphate and UDP-galactose during galactose metabolism | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.056 Score=51.12 Aligned_cols=72 Identities=22% Similarity=0.356 Sum_probs=45.5
Q ss_pred CCCcccCCC--CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 008885 389 KECWFCLSS--PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK 460 (550)
Q Consensus 389 ~~C~FC~~~--~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~ 460 (550)
+.|.||..- ...+.-.||..+++.-++.|-..--|--++|+|.+|..++.++++++..++-...+.+.+.+.
T Consensus 13 Gs~L~~D~~~~E~~~~~Riv~en~~f~a~vP~~a~wP~ev~ilpkrh~~~l~~l~~~E~~dlA~~l~~i~~r~d 86 (166)
T PF02744_consen 13 GSCLFCDHLQMELAEGERIVYENEHFVAFVPFAARWPFEVWILPKRHVPSLADLTDEERDDLAAILKPILRRYD 86 (166)
T ss_dssp SS-HHHHHHHHHHHH-TTEEEE-SSEEEE--TT--STT-EEEEESS--SSGGG--HHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHhhcCCCEEEEECCceEEEEECcccCCcEEEEecCCChhhHHHhhhHHHhhHHHHHHHHHHHhc
Confidence 479999753 233445788888887677776667788999999999999999999988887776666665554
|
The enzyme is present in prokaryotes and eukaryotes. Defects in GalT in humans is the cause of galactosemia, an inherited disorder of galactose metabolism that leads to jaundice, cataracts and mental retardation. This domain describes the C-terminal of Galactose-1-phosphate uridyl transferase. SCOP reports fold duplication of the C-terminal with the N-terminal domain. Both are involved in Zn and Fe binding; GO: 0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity, 0006012 galactose metabolic process; PDB: 1GUP_C 1HXP_A 1HXQ_A 1GUQ_C. |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=94.58 E-value=2 Score=50.19 Aligned_cols=41 Identities=20% Similarity=0.135 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCCChHH----------------HHHHHHHHhhhcCCCcEEEEecCCCC
Q 008885 3 PPRILLCGDVLGRLNQ----------------LFKRVQSVNKSAGPFDAVLCVGQFFP 44 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~----------------l~~kv~~l~~k~GpfD~li~~GDff~ 44 (550)
.++||.+.|+||++.. +...|+++.+++ +--++|-.||++.
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~-~ntlllD~GD~iq 95 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEA-KNSVLFDDGDALQ 95 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhC-CCeEEEECCCCCC
Confidence 3689999999998632 223344443333 4579999999864
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=94.16 E-value=2.5 Score=51.92 Aligned_cols=204 Identities=13% Similarity=0.075 Sum_probs=101.5
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHhhhcCCCcEEEEecCCCCCChhh-------------HHHHH
Q 008885 4 PRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL-------------LDEFM 54 (550)
Q Consensus 4 ~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~-------------~~~~~ 54 (550)
++||.++|+||++. ++...++++.+++ +--++|-.||++....-. ..-..
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~-~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i 120 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKEN-PNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMI 120 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhC-CCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHH
Confidence 68999999999863 3344444444444 334555599997532100 00011
Q ss_pred HHhcccCCCCccEEEEecCCCChHH--HHHHhhccccccCcccCCceecCcEEEcC------CCCeEEE---------cC
Q 008885 55 NYVEGRSEIPIPTYFIGDYGVGAAK--VLLAASKNSANQGFKMDGFKVTDNLFWLK------GSGNFTL---------HG 117 (550)
Q Consensus 55 ~~l~g~~~~p~ptyfv~GNhe~~~~--~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg------~~gv~~i---------~G 117 (550)
+.+ ..+.+ -+++.||||.... .+..+-.. ..-..||.|++.-. ..-|++. +|
T Consensus 121 ~~m---N~lgy-Da~~lGNHEFd~G~~~L~~~~~~-------a~fp~l~aNv~~~~~~~~~~py~I~~~~~~~~~g~~~g 189 (1163)
T PRK09419 121 KAM---NALGY-DAGTLGNHEFNYGLDFLDGTIKG-------ANFPVLNANVKYKNGKNVYTPYKIKEKTVTDENGKKQG 189 (1163)
T ss_pred HHH---hhcCc-cEEeecccccccCHHHHHHHHhc-------CCCCEEEeeeecCCCCcccCCEEEEEEEeeccCCCCCC
Confidence 111 11222 2677999996522 23222111 12246888885432 2234556 89
Q ss_pred eEEEEEeCccCCCCCCC--------CCCCHHHHHHHHHhhc--CCCCcc--EEEeCCCCccccccccccccccccCCCCC
Q 008885 118 LSVAYLSGRQSSEGQQF--------GTYSQDDVDALRALAE--EPGIVD--LFLTNEWPSGVTNKAAASDMLVGISDSSN 185 (550)
Q Consensus 118 lrIa~lgG~~~~~~~~~--------~~~te~di~~L~~l~~--~~~~vD--ILLTh~wP~gi~~~~~~~~~~~~~~~~~~ 185 (550)
+||+.+|=..+.- ..| ..|+ +.++++++... ...++| |+|+|.--..- . ...
T Consensus 190 vkIgiiG~~~p~~-~~~~~~~~~g~~~~~-d~v~~~~~~v~~lk~~gaDvII~l~H~G~~~~--~------------~~~ 253 (1163)
T PRK09419 190 VKVGYIGFVPPQI-MTWDKKNLKGKVEVK-NIVEEANKTIPEMKKGGADVIVALAHSGIESE--Y------------QSS 253 (1163)
T ss_pred eEEEEEecCCcch-hhcchhhccCcEEEC-CHHHHHHHHHHHHHhcCCCEEEEEeccCcCCC--C------------CCC
Confidence 9999998753211 011 1121 12333332110 023566 47788542210 0 011
Q ss_pred C-cHHHHHHHHHh-CCCEEEEccCCCccccccccCC-------CCcceeEEEEcCCCCC
Q 008885 186 T-DSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNV-------DAVHVTRFLGLAPVGN 235 (550)
Q Consensus 186 G-s~~i~~l~~~l-kPRYhf~Gh~~~f~er~Py~~~-------~~~~~TRFI~La~~g~ 235 (550)
| ...+.+|++++ .-...+.||.|..+....|... .....|-.+-.|.+|.
T Consensus 254 ~~en~~~~la~~~~gID~Il~GHsH~~~~~~~~~~~~~~~~~~~~i~g~~ivqag~~g~ 312 (1163)
T PRK09419 254 GAEDSVYDLAEKTKGIDAIVAGHQHGLFPGADYKGVPQFDNAKGTINGIPVVMPKSWGK 312 (1163)
T ss_pred CcchHHHHHHHhCCCCcEEEeCCCcccccCcccccccccccccceECCEEEEccChhhc
Confidence 2 22445666554 4678999999987763333211 1123455666666654
|
|
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.07 E-value=1.1 Score=48.63 Aligned_cols=189 Identities=18% Similarity=0.087 Sum_probs=91.5
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCC-CCChh--hHHHHHHHhcccCCCCccEEEEecCCCChHH
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFF-PDSSE--LLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK 79 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff-~~~~~--~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~ 79 (550)
+.++.++||.--.... .....+...+.++|+||.+|||- ..... .-++|...+.- ...-+|..++.||||....
T Consensus 147 ~~~~~i~GDlG~~~~~--~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp-~As~vPymv~~GNHE~d~~ 223 (452)
T KOG1378|consen 147 PTRAAIFGDMGCTEPY--TSTLRNQEENLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEP-IASYVPYMVCSGNHEIDWP 223 (452)
T ss_pred ceeEEEEccccccccc--cchHhHHhcccCCcEEEEecchhhcCCCCccchHHHHhhhhh-hhccCceEEecccccccCC
Confidence 3578889986432211 01122233444699999999993 22211 22334444322 3355899999999996432
Q ss_pred H---HHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCC---C
Q 008885 80 V---LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEP---G 153 (550)
Q Consensus 80 ~---l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~---~ 153 (550)
- +..+... + ..+..+.+--.|++|- +..++..|.+||=-... .....++...-.-+.|++.+ .
T Consensus 224 ~~~~F~~y~~R-f--~mP~~~s~s~~~l~YS-----fd~G~vhfv~lsse~~~---~~~~~~~QY~WL~~dL~~v~r~~t 292 (452)
T KOG1378|consen 224 PQPCFVPYSAR-F--NMPGNSSESDSNLYYS-----FDVGGVHFVVLSTETYY---NFLKGTAQYQWLERDLASVDRKKT 292 (452)
T ss_pred Cccccccccee-e--ccCCCcCCCCCceeEE-----EeeccEEEEEEeccccc---cccccchHHHHHHHHHHHhcccCC
Confidence 0 1111000 0 0000001111245542 35677888887642111 11122332211111122222 3
Q ss_pred CccEEEeCCCCccccccccccccccccCCCCCCc--HHHHHHHHHhCCCEEEEccCCCcccc
Q 008885 154 IVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTD--STVSELVAEIKPRYHIAGSKGVFYAR 213 (550)
Q Consensus 154 ~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs--~~i~~l~~~lkPRYhf~Gh~~~f~er 213 (550)
+==|++-|.|=..-..... ..++ ...+ ..+.+|.-+.+-...|+||.| -|||
T Consensus 293 PWlIv~~HrP~Y~S~~~~~---~reG----~~~~~~~~LE~l~~~~~VDvvf~GHvH-~YER 346 (452)
T KOG1378|consen 293 PWLIVQGHRPMYCSSNDAH---YREG----EFESMREGLEPLFVKYKVDVVFWGHVH-RYER 346 (452)
T ss_pred CeEEEEecccceecCCchh---hccC----cchhhHHHHHHHHHHhceeEEEeccce-ehhc
Confidence 4456666654333221000 0111 1112 379999999999999999987 5677
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.19 Score=46.60 Aligned_cols=70 Identities=11% Similarity=0.127 Sum_probs=45.8
Q ss_pred CCCCEEEEEcCCCC------------ChHHHHH-HHHHHhhhcCCCcEEEEecCCCCCCh--hhHHHHHHHhcccCCCCc
Q 008885 1 MSPPRILLCGDVLG------------RLNQLFK-RVQSVNKSAGPFDAVLCVGQFFPDSS--ELLDEFMNYVEGRSEIPI 65 (550)
Q Consensus 1 M~~~KILv~GDvhG------------~~~~l~~-kv~~l~~k~GpfD~li~~GDff~~~~--~~~~~~~~~l~g~~~~p~ 65 (550)
|+..+|+++||+|= +++..-+ .+..+++--+|=|.|-++|||-.... .+...+.+.|.|
T Consensus 1 ~sm~mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerLnG------ 74 (186)
T COG4186 1 ASMTMMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERLNG------ 74 (186)
T ss_pred CceeEEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHcCC------
Confidence 55558999999994 2222211 25556666678899999999955322 333345555544
Q ss_pred cEEEEecCCCC
Q 008885 66 PTYFIGDYGVG 76 (550)
Q Consensus 66 ptyfv~GNhe~ 76 (550)
-..+|+|||+-
T Consensus 75 rkhlv~GNhDk 85 (186)
T COG4186 75 RKHLVPGNHDK 85 (186)
T ss_pred cEEEeeCCCCC
Confidence 45899999973
|
|
| >KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.15 Score=49.64 Aligned_cols=68 Identities=18% Similarity=0.371 Sum_probs=48.7
Q ss_pred EEEEEcCCCCChHHHHHHHHHHhhhcC--CCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 5 RILLCGDVLGRLNQLFKRVQSVNKSAG--PFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~G--pfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
-|-||||+||+|-.|.+..+. .| |----|..|||..-++-..+.|.-++.=+.+-|-.+-.+-||||.
T Consensus 47 PVTvCGDIHGQFyDL~eLFrt----gG~vP~tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEs 116 (306)
T KOG0373|consen 47 PVTVCGDIHGQFYDLLELFRT----GGQVPDTNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHES 116 (306)
T ss_pred CeeEeeccchhHHHHHHHHHh----cCCCCCcceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchh
Confidence 378999999999887665543 23 434567899997765555666665554346667778899999984
|
|
| >KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.17 Score=50.20 Aligned_cols=67 Identities=18% Similarity=0.364 Sum_probs=46.4
Q ss_pred EEEEcCCCCChHHHHHHHHHHhhhcC--CCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 6 ILLCGDVLGRLNQLFKRVQSVNKSAG--PFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 6 ILv~GDvhG~~~~l~~kv~~l~~k~G--pfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
|-||||+||+|..+.+..+. .| |--=-|.+||+..-+....+.+.-++.=+..-|--+-.+-||||.
T Consensus 45 vtvcGDIHGQf~Dllelf~i----gG~~~~t~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEs 113 (303)
T KOG0372|consen 45 VTVCGDIHGQFYDLLELFRI----GGDVPETNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHES 113 (303)
T ss_pred cEEeecccchHHHHHHHHHh----CCCCCCCceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchh
Confidence 78999999999998765432 33 334568899997655444555555544335556668999999985
|
|
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.34 Score=48.11 Aligned_cols=79 Identities=14% Similarity=0.105 Sum_probs=47.5
Q ss_pred CCcEEEEecCCCCC----C---hhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHHhhccccccCcccCCceecCcE
Q 008885 32 PFDAVLCVGQFFPD----S---SELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNL 104 (550)
Q Consensus 32 pfD~li~~GDff~~----~---~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl 104 (550)
..|.|+++||+|.. + +...+...+++. ...-+.++||++|||+ .++...... -.-++
T Consensus 29 ~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~-~a~~G~~v~~i~GN~D---fll~~~f~~------------~~g~~ 92 (237)
T COG2908 29 QADALYILGDIFDGWIGDDEPPQLHRQVAQKLLR-LARKGTRVYYIHGNHD---FLLGKRFAQ------------EAGGM 92 (237)
T ss_pred cCcEEEEechhhhhhhcCCcccHHHHHHHHHHHH-HHhcCCeEEEecCchH---HHHHHHHHh------------hcCce
Confidence 45999999999742 1 111122222221 2456789999999996 234332210 02235
Q ss_pred EEcCCCCeEEEcCeEEEEEeCc
Q 008885 105 FWLKGSGNFTLHGLSVAYLSGR 126 (550)
Q Consensus 105 ~~Lg~~gv~~i~GlrIa~lgG~ 126 (550)
..+.+.-+.+..|.++.-+=|-
T Consensus 93 ~l~~~~~~~~l~g~~~Ll~HGD 114 (237)
T COG2908 93 TLLPDPIVLDLYGKRILLAHGD 114 (237)
T ss_pred EEcCcceeeeecCcEEEEEeCC
Confidence 5666656667889999888883
|
|
| >KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.15 Score=55.65 Aligned_cols=103 Identities=22% Similarity=0.460 Sum_probs=65.8
Q ss_pred CCCCCcccceeEEEeccCCCCCCchhcccCCCCCCCCCCCccccCCCCcccccCCCCCCCCCCcccccccccccccCCCC
Q 008885 231 APVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQKRQKHGGG 310 (550)
Q Consensus 231 a~~g~~~K~Kw~yAf~i~p~~~~~~~~l~~~p~~~T~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (550)
|.|+.+.- -||+|.|.|=+.- .=-+=|+|||...- +..++|.+ ..|. |.
T Consensus 187 ~~ys~DeF--rMy~fKir~C~R~-------~shDwteCPf~Hpg-----EkARRRDP-----Rkyh-Ys----------- 235 (528)
T KOG1595|consen 187 GIYSSDEF--RMYSFKIRRCSRP-------RSHDWTECPFAHPG-----EKARRRDP-----RKYH-YS----------- 235 (528)
T ss_pred ccccccce--EEEeeeecccCCc-------cCCCcccCCccCCC-----cccccCCc-----cccc-cc-----------
Confidence 77777554 6999999987642 33588999997521 11122211 1110 10
Q ss_pred CCCCcceeeeccCCCCCCCcccccCCc----hhhhhhccccchhhhcccccCCCCCccccCCcCC
Q 008885 311 DGDKMCFKFIYSGSCPRGEKCNFRHDT----DAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQN 371 (550)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 371 (550)
.-+|=.|+. |.|.+|+.|+|||-- .+.+.|-.+.|-| .|.|.. |=|.|.|..+.
T Consensus 236 --~tpCPefrk-G~C~rGD~CEyaHgvfEcwLHPa~YRT~~CkD---g~~C~R-rvCfFAH~~eq 293 (528)
T KOG1595|consen 236 --STPCPEFRK-GSCERGDSCEYAHGVFECWLHPARYRTRKCKD---GGYCPR-RVCFFAHSPEQ 293 (528)
T ss_pred --CccCccccc-CCCCCCCccccccceehhhcCHHHhccccccC---CCCCcc-ceEeeecChHH
Confidence 014555554 789999999999974 4668888888844 466665 66888888664
|
|
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.22 Score=51.24 Aligned_cols=72 Identities=8% Similarity=0.135 Sum_probs=47.4
Q ss_pred CCEEEEEcCCCCChHH--HHHHHHHHhhhcCCCcEEEEecCCCCC-ChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 3 PPRILLCGDVLGRLNQ--LFKRVQSVNKSAGPFDAVLCVGQFFPD-SSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~--l~~kv~~l~~k~GpfD~li~~GDff~~-~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
..||+.++|.|-..-. ..+.+.++-... | |+|+..||++.- .......+...+.. .+.+.++|+|.|||+-.
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~-~-DlivltGD~~~~~~~~~~~~~~~~L~~-L~~~~gv~av~GNHd~~ 118 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANEL-P-DLIVLTGDYVDGDRPPGVAALALFLAK-LKAPLGVFAVLGNHDYG 118 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcC-C-CEEEEEeeeecCCCCCCHHHHHHHHHh-hhccCCEEEEecccccc
Confidence 3589999999986433 222233333333 3 999999999772 33334445555543 45788999999999743
|
|
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.08 E-value=0.42 Score=47.53 Aligned_cols=67 Identities=18% Similarity=0.257 Sum_probs=44.1
Q ss_pred CEEEEEcCCCCChHHHH----------------HHHHHHhhhcCCCcEEEEecCCCCC---Ch----hhHHHHHHHhccc
Q 008885 4 PRILLCGDVLGRLNQLF----------------KRVQSVNKSAGPFDAVLCVGQFFPD---SS----ELLDEFMNYVEGR 60 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~----------------~kv~~l~~k~GpfD~li~~GDff~~---~~----~~~~~~~~~l~g~ 60 (550)
-+.||++|+|=-++..+ +++.++-.+.+ .+.||++||++-+ .. .+...|.+++.+
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~-p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~- 97 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYG-PKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE- 97 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcC-CCEEEEcCccccccCccccccHHHHHHHHHHhcc-
Confidence 36899999996554444 55555555664 6999999999543 11 123345555432
Q ss_pred CCCCccEEEEecCCCC
Q 008885 61 SEIPIPTYFIGDYGVG 76 (550)
Q Consensus 61 ~~~p~ptyfv~GNhe~ 76 (550)
. -+.+|.||||.
T Consensus 98 --~--evi~i~GNHD~ 109 (235)
T COG1407 98 --R--EVIIIRGNHDN 109 (235)
T ss_pred --C--cEEEEeccCCC
Confidence 1 48999999975
|
|
| >cd00608 GalT Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate | Back alignment and domain information |
|---|
Probab=91.48 E-value=1.3 Score=46.63 Aligned_cols=75 Identities=16% Similarity=0.081 Sum_probs=44.6
Q ss_pred EEEEeccccCCCCCCCHHHHHHHHH-HHHHHHHHHhhcCC-ceEEEeec---CC-CcCeEEEEEeec---CCCch---HH
Q 008885 426 VLVIPVEHVPNTISTSPECEKELGR-FQNSLMMYYKNQGK-EAVFFEWL---SK-RGTHANLQAVPI---PTSKA---AA 493 (550)
Q Consensus 426 ~lIiP~~H~~s~~~l~~~~~~Ei~~-~~~~L~~~~~~~~~-~~v~~E~~---~~-~~~H~hi~~vPv---p~~~~---~~ 493 (550)
++|-.-.|..++.+++.+.+.++.. +++.+.++.+..+. -+.+||+- .+ ...|-|.|++-. |.... +.
T Consensus 96 Vii~sp~H~~~l~~~~~~~i~~v~~~~~~r~~~l~~~~~~~yv~if~N~G~~aGaSl~HpH~Qi~a~~~vp~~~~~e~~~ 175 (329)
T cd00608 96 VICFSPDHNLTLAEMSVAEIREVVEAWAERTRELGKNPRIKYVQIFENKGAEMGASLPHPHGQIWALPFLPPEVARELRN 175 (329)
T ss_pred EEEECCcccCChhhCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeecCcccccCCCCCCeeeeeCCcCChHHHHHHHH
Confidence 5567789999999999887666654 55665555543332 35567721 11 246888887643 33332 34
Q ss_pred HHHHHHH
Q 008885 494 VQDIFNL 500 (550)
Q Consensus 494 ~~~~F~~ 500 (550)
+..||.+
T Consensus 176 ~~~y~~~ 182 (329)
T cd00608 176 QKAYYEK 182 (329)
T ss_pred HHHHHHH
Confidence 5566654
|
The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer. |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.30 E-value=0.54 Score=45.51 Aligned_cols=46 Identities=20% Similarity=0.134 Sum_probs=27.6
Q ss_pred CCCcEEEEecCCCCCChhhHHHHHHHhc--------ccC--------------CCCccEEEEecCCCC
Q 008885 31 GPFDAVLCVGQFFPDSSELLDEFMNYVE--------GRS--------------EIPIPTYFIGDYGVG 76 (550)
Q Consensus 31 GpfD~li~~GDff~~~~~~~~~~~~~l~--------g~~--------------~~p~ptyfv~GNhe~ 76 (550)
...|.|+++||+|+..-...++|.+++. ... .-.++++.|+||||-
T Consensus 43 l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDI 110 (193)
T cd08164 43 LKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDV 110 (193)
T ss_pred cCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccC
Confidence 3579999999999752212223332211 101 014889999999973
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=91.29 E-value=0.44 Score=51.76 Aligned_cols=60 Identities=18% Similarity=0.313 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhccc-------------------------CCCCccEEE
Q 008885 16 LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGR-------------------------SEIPIPTYF 69 (550)
Q Consensus 16 ~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~-~~~~~~~~~l~g~-------------------------~~~p~ptyf 69 (550)
++.++.+|++|+.+. |||++|.+||-....+ .++.-+.+.|+|+ ....+|-|.
T Consensus 84 ~~AaVqtvNal~~~~-p~df~is~GD~~nn~~~nElrWyidvldG~~I~p~SG~~~~~e~v~~~~p~~a~GL~~~iPWY~ 162 (492)
T TIGR03768 84 LDAAVQTVNDLHKRD-RFDFGISLGDACNSTQYNELRWYIDVLDGKPITPSSGAHAGADTIDYQKPFQAAGLDKSIPWYQ 162 (492)
T ss_pred HHHHHHHHHHhhcCC-CceEEEeccccccchhHHHHHHHHHHhcCCeeccCCCCCCCccCCCCCCcccccccCCCCceEE
Confidence 456666777775544 8999999999976532 3344455666654 112389999
Q ss_pred EecCCCC
Q 008885 70 IGDYGVG 76 (550)
Q Consensus 70 v~GNhe~ 76 (550)
+.|||+.
T Consensus 163 v~GNHD~ 169 (492)
T TIGR03768 163 VLGNHDH 169 (492)
T ss_pred eecCCcc
Confidence 9999974
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=91.25 E-value=0.25 Score=51.85 Aligned_cols=208 Identities=13% Similarity=0.142 Sum_probs=103.7
Q ss_pred EEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHH-----
Q 008885 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK----- 79 (550)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~----- 79 (550)
-|.++||+||++..|...+......- |-.-.+.+||...-+....+.+.-+++=++..|--++.+-||||...-
T Consensus 60 PV~i~GDiHGq~~DLlrlf~~~g~~p-p~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yG 138 (331)
T KOG0374|consen 60 PVKIVGDIHGQFGDLLRLFDLLGSFP-PDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYG 138 (331)
T ss_pred CEEEEccCcCCHHHHHHHHHhcCCCC-CcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceee
Confidence 48999999999999876665533111 557788999985433322222222333235667778899999997521
Q ss_pred HHHHhhccccccCcccCCceec-CcE-EEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcC-CC--C
Q 008885 80 VLLAASKNSANQGFKMDGFKVT-DNL-FWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEE-PG--I 154 (550)
Q Consensus 80 ~l~~l~~~~~~~~~~~~g~ei~-~Nl-~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~-~~--~ 154 (550)
++++... .+ .....|-. .+. .+|.-.. .+++..+..=||..+ .-. +.+++..+..-... .. -
T Consensus 139 FydE~~r-r~----~~~~~w~~F~~~f~~mp~~a--~i~~kI~CmhGGlsp-~l~-----~~~~i~~i~rp~~~~~~gll 205 (331)
T KOG0374|consen 139 FYDECKR-RY----GEIKLWKAFNDAFNCLPLAA--LIDGKILCMHGGLSP-HLK-----SLDQIRAIPRPTDSPDKGLL 205 (331)
T ss_pred eHHHHHH-hc----chHHHHHHHHHHHhhCchhh--eecceEEEecCCCCh-hhc-----ChHHHhhccCCcCCCcccee
Confidence 2222210 00 00000000 001 1111111 134433333344422 111 13444443321000 01 2
Q ss_pred ccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccC--CCccccccccCCCCcceeEEEEcCC
Q 008885 155 VDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSK--GVFYAREPYSNVDAVHVTRFLGLAP 232 (550)
Q Consensus 155 vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~--~~f~er~Py~~~~~~~~TRFI~La~ 232 (550)
.|+|-++.= ..+.....+ ..++. ...|..+++++++++.=...+=+|. ...||. .. +..-+|-|-++.-
T Consensus 206 ~DLlWsdp~-~~~~g~~~n---~Rg~s-~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyef---fa-~r~lvTIFSAP~Y 276 (331)
T KOG0374|consen 206 CDLLWSDPD-DDVPGWEEN---DRGVS-FTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEF---FA-GRKLVTIFSAPNY 276 (331)
T ss_pred eeeeecCCC-CCCCCcccC---CCcee-eEecHHHHHHHHHHhCcceEEEcCccccccceE---ec-CceEEEEecCchh
Confidence 444422211 111111000 01111 2468899999999999999999993 335552 22 2345999998888
Q ss_pred CCC
Q 008885 233 VGN 235 (550)
Q Consensus 233 ~g~ 235 (550)
+|.
T Consensus 277 cg~ 279 (331)
T KOG0374|consen 277 CGE 279 (331)
T ss_pred ccc
Confidence 876
|
|
| >KOG2958 consensus Galactose-1-phosphate uridylyltransferase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.39 Score=48.61 Aligned_cols=62 Identities=19% Similarity=0.247 Sum_probs=50.5
Q ss_pred CCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 008885 399 SVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK 460 (550)
Q Consensus 399 ~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~ 460 (550)
..+|+.||-..++..+..|=-.+-|--.||||.+|+.++.++++-+..+|-...+.|...|.
T Consensus 211 ~l~Kervv~enehfivvvPywA~wPfEtllipk~h~~~~~~l~~~~k~dLasiLK~ll~Kyd 272 (354)
T KOG2958|consen 211 ALEKERVVVENEHFIVVVPYWATWPFETLLIPKRHVSRFHELDEVEKVDLASILKLLLIKYD 272 (354)
T ss_pred HhhhceEEeecCceEEEeehhhcCcceeeeechhhhhhhcccchHHHhhHHHHHHHHHHHHH
Confidence 46789999887777777776667788999999999999999999888888777766665544
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=90.41 E-value=20 Score=35.50 Aligned_cols=104 Identities=11% Similarity=0.077 Sum_probs=50.6
Q ss_pred CChHHHHHHHHHHhhhcCCCcEEEEecCC------C-CC-Ch---hhHHHHHHHhcccCCCCccEEEEecCCCChHH---
Q 008885 14 GRLNQLFKRVQSVNKSAGPFDAVLCVGQF------F-PD-SS---ELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK--- 79 (550)
Q Consensus 14 G~~~~l~~kv~~l~~k~GpfD~li~~GDf------f-~~-~~---~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~--- 79 (550)
.+++.+|+.+..+-+. .|++++=-.. . .. .. ....+..+.| ..+++-.+-+++||+.+..
T Consensus 22 ~~~~~~~~~v~~~~~~---~D~~~~NlE~~~~~~~~~~~~~~~~f~~~~~~~~~L---~~~G~d~~tlaNNH~fD~G~~g 95 (239)
T cd07381 22 YDFDPLFEDVKPLLRA---ADLAIGNLETPLTDKGSPAPSKYPHFRAPPEVADAL---KAAGFDVVSLANNHTLDYGEEG 95 (239)
T ss_pred CCchhHHHHHHHHHhc---CCEEEEEeecCccCCCCcCCCCceEecCCHHHHHHH---HHhCCCEEEcccccccccchHH
Confidence 3567788888777654 4777543221 1 00 00 0112233333 4466777777889987532
Q ss_pred HHHHhhccccccCcccCCceecCcEEE--cCCCCeEEEcCeEEEEEeCccC
Q 008885 80 VLLAASKNSANQGFKMDGFKVTDNLFW--LKGSGNFTLHGLSVAYLSGRQS 128 (550)
Q Consensus 80 ~l~~l~~~~~~~~~~~~g~ei~~Nl~~--Lg~~gv~~i~GlrIa~lgG~~~ 128 (550)
+.+.+..-. ..++. .+..|... ..+.-+++++|++|+.+|-...
T Consensus 96 l~~t~~~l~-~~~i~----~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~ 141 (239)
T cd07381 96 LLDTLDALD-EAGIA----HAGAGRNLEEARRPAILEVNGIKVAFLAYTYG 141 (239)
T ss_pred HHHHHHHHH-HcCCc----eeECCCCHHHhcCcEEEEECCEEEEEEEEECC
Confidence 222221100 00000 11111110 0122345789999999998654
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=89.68 E-value=23 Score=35.15 Aligned_cols=189 Identities=12% Similarity=0.112 Sum_probs=92.9
Q ss_pred EEEEEcCCC-------CChHHHHHHHHHHhhhcCCCcEEEEe------cCC--CCCC-h---hhHHHHHHHhcccCCCCc
Q 008885 5 RILLCGDVL-------GRLNQLFKRVQSVNKSAGPFDAVLCV------GQF--FPDS-S---ELLDEFMNYVEGRSEIPI 65 (550)
Q Consensus 5 KILv~GDvh-------G~~~~l~~kv~~l~~k~GpfD~li~~------GDf--f~~~-~---~~~~~~~~~l~g~~~~p~ 65 (550)
+|+++||+- .+++.+|+.+..+-++ .|++++= ++- .... . ....+..+.| ..+++
T Consensus 1 ~i~~~GDi~~~~~~~~~~~~~~~~~v~~~~~~---aD~~~~NlE~~~~~~~~~~~~~~~~~f~~~~~~~~~l---~~~G~ 74 (239)
T smart00854 1 TLSFVGDVMLGRGVYKADFSPPFAGVKPLLRA---ADLAIGNLETPITGSGSPASGKKYPNFRAPPENAAAL---KAAGF 74 (239)
T ss_pred CEEEEeeecccCcccccCcchHHHHHHHHHhc---CCEeEEEeeccccCCCCCCCCCCceEecCCHHHHHHH---HHhCC
Confidence 478889872 3468888888776553 4766652 111 1100 0 0112333343 45667
Q ss_pred cEEEEecCCCChHH---HHHHhhccccccCcccCCceecCcEEEcC---------CCCeEEEcCeEEEEEeCccCCCC--
Q 008885 66 PTYFIGDYGVGAAK---VLLAASKNSANQGFKMDGFKVTDNLFWLK---------GSGNFTLHGLSVAYLSGRQSSEG-- 131 (550)
Q Consensus 66 ptyfv~GNhe~~~~---~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg---------~~gv~~i~GlrIa~lgG~~~~~~-- 131 (550)
-...+++||+.+.. +.+.+.... ..|+.++| +.-+++++|++|+.+|-+.....
T Consensus 75 d~~~laNNH~fD~G~~gl~~t~~~l~------------~a~i~~~g~~~~~~~~~~~~i~~~~g~kIg~ig~t~~~~~~~ 142 (239)
T smart00854 75 DVVSLANNHSLDYGEEGLLDTLAALD------------AAGIAHVGAGRNLAEARKPAIVEVKGIKIALLAYTYGTNNGW 142 (239)
T ss_pred CEEEeccCcccccchHHHHHHHHHHH------------HCCCCEeeCCCChHHhhCcEEEEECCEEEEEEEEEcCCCCCc
Confidence 77778889997633 222221100 11222222 12345689999999997644221
Q ss_pred ----CCCC--CC---CHHHHHH-HHHhhcCCCCccEE-EeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh---
Q 008885 132 ----QQFG--TY---SQDDVDA-LRALAEEPGIVDLF-LTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI--- 197 (550)
Q Consensus 132 ----~~~~--~~---te~di~~-L~~l~~~~~~vDIL-LTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l--- 197 (550)
...+ .. ..+.+.+ +..+ ..++|++ +...|-..... .-++...++++++
T Consensus 143 ~~~~~~~g~~~~~~~~~~~i~~~i~~l---r~~~D~vIv~~H~G~e~~~---------------~p~~~~~~~A~~l~~~ 204 (239)
T smart00854 143 AASKDRPGVALLPDLDREKILADIARA---RKKADVVIVSLHWGVEYQY---------------EPTDEQRELAHALIDA 204 (239)
T ss_pred ccCCCCCCeeecCcCCHHHHHHHHHHH---hccCCEEEEEecCccccCC---------------CCCHHHHHHHHHHHHc
Confidence 0011 11 1232222 2222 2347764 33345443210 1133334455443
Q ss_pred CCCEEEEccCCCccccccccCCCCcceeEEEEcCCCC
Q 008885 198 KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVG 234 (550)
Q Consensus 198 kPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g 234 (550)
.-...+.||.|..-.-+=|+ ..--|-+||.+-
T Consensus 205 G~DvIiG~H~H~~~~~e~~~-----~~~I~YslGNfi 236 (239)
T smart00854 205 GADVVIGHHPHVLQPIEIYK-----GKLIAYSLGNFI 236 (239)
T ss_pred CCCEEEcCCCCcCCceEEEC-----CEEEEEcccccc
Confidence 67899999988643322222 234466777663
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >COG4360 APA2 ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.45 E-value=0.54 Score=46.36 Aligned_cols=76 Identities=22% Similarity=0.287 Sum_probs=43.4
Q ss_pred EEEECCEEEE-EecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCceEEEe---ecCCCcCeEE
Q 008885 405 IVSVGEYYYC-ALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFE---WLSKRGTHAN 480 (550)
Q Consensus 405 iis~g~~~yl-~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~~~~~v~~E---~~~~~~~H~h 480 (550)
.+.-++..|+ .|+|.|+++-|.|||..+--.--..|+..- |..+..-+-... +.|||. .+.....|-|
T Consensus 86 fvg~~s~th~~llNKF~VVdeHlLiVTrefedQ~s~LTl~D------f~ta~~vL~~ld--glvFYNsGp~aGaSq~HkH 157 (298)
T COG4360 86 FVGDISDTHKLLLNKFPVVDEHLLIVTREFEDQESALTLAD------FTTAYAVLCGLD--GLVFYNSGPIAGASQDHKH 157 (298)
T ss_pred hccCCchhHhhhhhcCCcccceeEEeehhhhhccccCCHHH------HHHHHHHHhccc--ceEEecCCCCcCcCCCccc
Confidence 3333444664 688999999999999875333222233221 111111111123 378888 1222246999
Q ss_pred EEEeecCC
Q 008885 481 LQAVPIPT 488 (550)
Q Consensus 481 i~~vPvp~ 488 (550)
+|+||.|-
T Consensus 158 LQi~pmPf 165 (298)
T COG4360 158 LQIVPMPF 165 (298)
T ss_pred eeEeeccc
Confidence 99999994
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=89.13 E-value=2.8 Score=47.94 Aligned_cols=113 Identities=12% Similarity=-0.097 Sum_probs=61.1
Q ss_pred CCEEEEEcCCCCChHH----------------HHHHHHHHhhhcCCCcEEEEecCCCCCChhhH------------HHHH
Q 008885 3 PPRILLCGDVLGRLNQ----------------LFKRVQSVNKSAGPFDAVLCVGQFFPDSSELL------------DEFM 54 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~----------------l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~------------~~~~ 54 (550)
.++||.+.|+||++.. +...++++.+++ +--++|-.||++....-.. .-..
T Consensus 2 ~l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~-~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~ 80 (626)
T TIGR01390 2 DLRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEV-KNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVY 80 (626)
T ss_pred eEEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhC-CCeEEEECCCcCCCccchhhhhhccccCCCcChHH
Confidence 4689999999999743 333344444333 4469999999865311000 0011
Q ss_pred HHhcccCCCCccEEEEecCCCChHH--HHHHhhccccccCcccCCceecCcEEEcC-------CCCeEEE-----c----
Q 008885 55 NYVEGRSEIPIPTYFIGDYGVGAAK--VLLAASKNSANQGFKMDGFKVTDNLFWLK-------GSGNFTL-----H---- 116 (550)
Q Consensus 55 ~~l~g~~~~p~ptyfv~GNhe~~~~--~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg-------~~gv~~i-----~---- 116 (550)
+.+ ..+.+ -..+.||||.... .+..+-.. ..-..|+.|++... ..-|++. +
T Consensus 81 ~~m---N~lgy-Da~tlGNHEFd~G~~~L~~~~~~-------a~fP~l~aNv~~~~~~~~~~~py~I~~~~~~~~~G~~~ 149 (626)
T TIGR01390 81 KAM---NLLKY-DVGNLGNHEFNYGLPFLKQAIAA-------AKFPIVNANVVDAGTGQPAFTPYLIQERSVVDTDGKPH 149 (626)
T ss_pred HHH---hhcCc-cEEecccccccccHHHHHHHHHh-------CCCCEEEEEEEeCCCCCcccCCeEEEEEEeeccCCCcc
Confidence 111 12222 2578899996532 23222111 11246888886532 1223333 2
Q ss_pred CeEEEEEeCcc
Q 008885 117 GLSVAYLSGRQ 127 (550)
Q Consensus 117 GlrIa~lgG~~ 127 (550)
|+||+.+|=.-
T Consensus 150 ~~kIGiIG~~~ 160 (626)
T TIGR01390 150 TLKVGYIGFVP 160 (626)
T ss_pred ceEEEEEEecC
Confidence 69999998753
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PLN02643 ADP-glucose phosphorylase | Back alignment and domain information |
|---|
Probab=88.69 E-value=7.2 Score=41.15 Aligned_cols=74 Identities=11% Similarity=0.135 Sum_probs=43.5
Q ss_pred EEEeccccCCCCCCCHHHHHHHHH-HHHHHHHHHhhcCC-ceEEEeecC---C-CcCeEEEEEeec---CCCch---HHH
Q 008885 427 LVIPVEHVPNTISTSPECEKELGR-FQNSLMMYYKNQGK-EAVFFEWLS---K-RGTHANLQAVPI---PTSKA---AAV 494 (550)
Q Consensus 427 lIiP~~H~~s~~~l~~~~~~Ei~~-~~~~L~~~~~~~~~-~~v~~E~~~---~-~~~H~hi~~vPv---p~~~~---~~~ 494 (550)
+|-.=+|..++.+++.+.+..+.+ +++.+..+.+..+. -+.+||+.. + ...|-|-|++-. |.... +.+
T Consensus 111 ii~sp~H~~~l~~~~~~~i~~v~~~~~~r~~~l~~~~~i~yv~iF~N~G~~aGaSl~HPH~Qi~a~~~vP~~~~~el~~~ 190 (336)
T PLN02643 111 VIETPVHSVQLSDLPARHIGEVLKAYKKRINQLQSDSRFKYVQVFKNHGASAGASMSHSHSQIIALPVVPPSVSARLDGS 190 (336)
T ss_pred EEeCCccCCChHHCCHHHHHHHHHHHHHHHHHHhcCCCceEEEEEeecCccCCcCCCCCceeeEecCcCChHHHHHHHHH
Confidence 444568999999999887666654 55555544443333 355677221 1 245778777644 44443 345
Q ss_pred HHHHHH
Q 008885 495 QDIFNL 500 (550)
Q Consensus 495 ~~~F~~ 500 (550)
+.||++
T Consensus 191 ~~y~~~ 196 (336)
T PLN02643 191 KEYFEK 196 (336)
T ss_pred HHHHHH
Confidence 666655
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=88.59 E-value=1.5 Score=47.09 Aligned_cols=75 Identities=21% Similarity=0.212 Sum_probs=44.7
Q ss_pred CCEEEEEcCCC--C---------ChHHHH-----HHHHHHhhhcCCCcEEEEecCCCCCChh-hHHHHHHHhcc-----c
Q 008885 3 PPRILLCGDVL--G---------RLNQLF-----KRVQSVNKSAGPFDAVLCVGQFFPDSSE-LLDEFMNYVEG-----R 60 (550)
Q Consensus 3 ~~KILv~GDvh--G---------~~~~l~-----~kv~~l~~k~GpfD~li~~GDff~~~~~-~~~~~~~~l~g-----~ 60 (550)
..||+.++|.| | .++++. .+.-...-.....|+++++||+|..+.. ..++|.+++.. .
T Consensus 48 ~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~ 127 (410)
T KOG3662|consen 48 STKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFG 127 (410)
T ss_pred ceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhC
Confidence 46899999976 3 222221 1222222233467999999999975321 23344444321 1
Q ss_pred CCCCccEEEEecCCCCh
Q 008885 61 SEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 61 ~~~p~ptyfv~GNhe~~ 77 (550)
.+..+++..++||||--
T Consensus 128 ~k~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 128 RKGNIKVIYIAGNHDIG 144 (410)
T ss_pred CCCCCeeEEeCCccccc
Confidence 34578999999999853
|
|
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=88.56 E-value=3.4 Score=47.48 Aligned_cols=112 Identities=11% Similarity=-0.064 Sum_probs=61.3
Q ss_pred CCEEEEEcCCCCChH----------------HHHHHHHHHhhhcCCCcEEEEecCCCCCChhhH------------HHHH
Q 008885 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELL------------DEFM 54 (550)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~------------~~~~ 54 (550)
.++||.+.|+||++. ++-..++++.+++ +--++|-.||++....-.. .-.-
T Consensus 25 ~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~-~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 25 DLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEA-KNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred eEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhC-CCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 578999999999863 3333444444443 4469999999965321100 0011
Q ss_pred HHhcccCCCCccEEEEecCCCChH--HHHHHhhccccccCcccCCceecCcEEEcC-------CCCeEEE-----c----
Q 008885 55 NYVEGRSEIPIPTYFIGDYGVGAA--KVLLAASKNSANQGFKMDGFKVTDNLFWLK-------GSGNFTL-----H---- 116 (550)
Q Consensus 55 ~~l~g~~~~p~ptyfv~GNhe~~~--~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg-------~~gv~~i-----~---- 116 (550)
+.+ ..+.+ -..+.||||... +.+..+-.. ..-..|+.|++... ..-|++. +
T Consensus 104 ~am---N~lgy-Da~tlGNHEFd~G~~~L~~~~~~-------a~fP~l~ANv~~~~~~~~~~~py~I~e~~v~~~~G~~~ 172 (649)
T PRK09420 104 KAM---NTLDY-DVGNLGNHEFNYGLDYLKKALAG-------AKFPYVNANVIDAKTGKPLFTPYLIKEKEVKDKDGKEH 172 (649)
T ss_pred HHH---HhcCC-cEEeccchhhhcCHHHHHHHHhc-------CCCCEEEEEEEecCCCCcccCCeEEEEEEeeccCCCcc
Confidence 111 11111 367889999653 233332111 12246888887432 1223333 3
Q ss_pred CeEEEEEeCc
Q 008885 117 GLSVAYLSGR 126 (550)
Q Consensus 117 GlrIa~lgG~ 126 (550)
|+||+.+|=.
T Consensus 173 ~vkIGiIGl~ 182 (649)
T PRK09420 173 TIKIGYIGFV 182 (649)
T ss_pred ceEEEEEEec
Confidence 5999999854
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=87.81 E-value=3.1 Score=48.89 Aligned_cols=112 Identities=13% Similarity=-0.028 Sum_probs=61.7
Q ss_pred CCEEEEEcCCCCChH----------------HHHHHHHHHhhhcCCCcEEEEecCCCCCChh----h------HH---HH
Q 008885 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----L------LD---EF 53 (550)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~li~~GDff~~~~~----~------~~---~~ 53 (550)
.++||.+.|+||++. ++...++++.+++ +--++|-.||++....- . .. -.
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~-~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~ 193 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKEN-PNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPM 193 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhC-CCEEEEecCCCCCCCcccchhhhccccccCcchHH
Confidence 368999999999864 3333344444443 45699999998642110 0 00 01
Q ss_pred HHHhcccCCCCccEEEEecCCCChH--HHHHHhhccccccCcccCCceecCcEEEcCC-------CCeEEE-----cC--
Q 008885 54 MNYVEGRSEIPIPTYFIGDYGVGAA--KVLLAASKNSANQGFKMDGFKVTDNLFWLKG-------SGNFTL-----HG-- 117 (550)
Q Consensus 54 ~~~l~g~~~~p~ptyfv~GNhe~~~--~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~-------~gv~~i-----~G-- 117 (550)
.+.+ ..+.+ =..+.||||... +.+..+-.. ..-..|+.||+.... .-|++. +|
T Consensus 194 i~am---N~LGy-DA~tLGNHEFDyG~d~L~~~l~~-------a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~d~~G~~ 262 (814)
T PRK11907 194 YAAL---EALGF-DAGTLGNHEFNYGLDYLEKVIAT-------ANMPIVNANVLDPTTGDFLYTPYTIVTKTFTDTEGKK 262 (814)
T ss_pred HHHH---hccCC-CEEEechhhcccCHHHHHHHHHh-------CCCCEEEeeeeecCCCCccCCCeEEEEEEEecCCCcc
Confidence 2222 22222 267889999653 233332111 112468888875432 223333 55
Q ss_pred --eEEEEEeCc
Q 008885 118 --LSVAYLSGR 126 (550)
Q Consensus 118 --lrIa~lgG~ 126 (550)
+||+.+|=.
T Consensus 263 ~~vKIGiIGlv 273 (814)
T PRK11907 263 VTLNIGITGIV 273 (814)
T ss_pred cceEEEEEEeC
Confidence 999999864
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.51 E-value=3.6 Score=41.08 Aligned_cols=64 Identities=19% Similarity=0.242 Sum_probs=43.5
Q ss_pred CEEEEEcCCCCC--hHHHHHHHHHHhhhcCCCcEEEEecCC----CCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 4 PRILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQF----FPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 4 ~KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~li~~GDf----f~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
||||++||+-|+ .+.+.+.+..+-+|. +.|++|+=|.. |+...+ .+.+++. ..+- +++.|||-=
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~ky-k~dfvI~N~ENaa~G~Git~k---~y~~l~~----~G~d-viT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKY-KIDFVIVNGENAAGGFGITEK---IYKELLE----AGAD-VITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhh-cCcEEEEcCccccCCcCCCHH---HHHHHHH----hCCC-EEecccccc
Confidence 799999999997 556777787776666 58999999986 343322 3344432 2222 577888853
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=84.14 E-value=5 Score=40.69 Aligned_cols=184 Identities=13% Similarity=0.116 Sum_probs=89.2
Q ss_pred CCcEEEEecCCCCCC---------------------hhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHH--hhccc
Q 008885 32 PFDAVLCVGQFFPDS---------------------SELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLA--ASKNS 88 (550)
Q Consensus 32 pfD~li~~GDff~~~---------------------~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~--l~~~~ 88 (550)
.+.-||++||..... ....+++..||.. ....+|+..+|||||-....+.+ +....
T Consensus 42 ~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~-l~~~i~V~imPG~~Dp~~~~lPQqplh~~l 120 (257)
T cd07387 42 SIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQ-LASSVPVDLMPGEFDPANHSLPQQPLHRCL 120 (257)
T ss_pred ceEEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHh-hhcCCeEEECCCCCCcccccCCCCCCCHHH
Confidence 345699999985521 1123456666654 33468999999999743222211 00000
Q ss_pred cccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCCCCcccc
Q 008885 89 ANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVT 168 (550)
Q Consensus 89 ~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh~wP~gi~ 168 (550)
|+. +. --.|+..+..-..++++|++|.+.+|..-.+-.....+ ++.++.|+...+ + =|-.|..=
T Consensus 121 ----fp~-s~-~~~~~~~vtNP~~~~i~g~~vLgtsGqni~Di~ky~~~-~~~l~~me~~L~--w------rHlaPTaP- 184 (257)
T cd07387 121 ----FPK-SS-NYSTLNLVTNPYEFSIDGVRVLGTSGQNVDDILKYSSL-ESRLDILERTLK--W------RHIAPTAP- 184 (257)
T ss_pred ----hhc-cc-ccCCcEEeCCCeEEEECCEEEEEECCCCHHHHHHhCCC-CCHHHHHHHHHH--h------cccCCCCC-
Confidence 000 00 01356655554566899999999999643111000011 122333332110 0 12222110
Q ss_pred ccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCCcccceeEEEeccC
Q 008885 169 NKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPT 248 (550)
Q Consensus 169 ~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~~~K~Kw~yAf~i~ 248 (550)
|... ..|- . .-+-++-.--|-..|+||.+.|--+. |.+. ....+|.|++..|-. ..-+--+++.
T Consensus 185 DTL~--~yP~------~---~~Dpfvi~~~PhVyf~Gnq~~f~t~~-~~~~-~~~~v~lv~vP~Fs~---t~~~vlvdl~ 248 (257)
T cd07387 185 DTLW--CYPF------T---DRDPFILEECPHVYFAGNQPKFGTKL-VEGE-EGQRVLLVCVPSFSK---TGTAVLVNLR 248 (257)
T ss_pred Cccc--cccC------C---CCCceeecCCCCEEEeCCCcceeeeE-EEcC-CCCeEEEEEeCCcCc---CCEEEEEECC
Confidence 0000 0010 0 00111223359999999987654332 4332 256799999999943 3345555544
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >COG1085 GalT Galactose-1-phosphate uridylyltransferase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=83.74 E-value=5.6 Score=41.76 Aligned_cols=99 Identities=19% Similarity=0.149 Sum_probs=57.5
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCC--------------------CCeEEEE--eccccCCCCCCCHHHH
Q 008885 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLV--------------------EDHVLVI--PVEHVPNTISTSPECE 445 (550)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~--------------------~gH~lIi--P~~H~~s~~~l~~~~~ 445 (550)
...|.||-.|.... ..--.+.+.|+.=++.|.. -|++.|| .=+|..++.+++.+..
T Consensus 39 ~~~CpfC~gn~~~t--~~~~~~~~~~~~~N~fp~v~~d~p~~~~~~~~~~~~~~~~g~~~VIvesp~H~~~l~~~~~~~~ 116 (338)
T COG1085 39 DPTCPFCPGNERTT--EENPRYWHVRVFPNDFPAVSEDPPDAPGSEDPLFKIQEARGKSRVIVESPDHSKTLPELPVEEI 116 (338)
T ss_pred CCcCCccCCcceec--ccCCCCcceeecCCcchhhcCCCCCCCccccchhcccccCcceEEEEECCcccCccccCCHHHH
Confidence 35799999883221 1111233444443334422 2555444 5589999999998887
Q ss_pred HHHHH-HHHHHHHHHhhcC-CceEEEeecC----CCcCeEEEEEeecCC
Q 008885 446 KELGR-FQNSLMMYYKNQG-KEAVFFEWLS----KRGTHANLQAVPIPT 488 (550)
Q Consensus 446 ~Ei~~-~~~~L~~~~~~~~-~~~v~~E~~~----~~~~H~hi~~vPvp~ 488 (550)
.++.+ ++...+++.+... +-|.+|++-. -...|-|.|++-+|.
T Consensus 117 ~~vv~~~~e~~~~L~~~~~~~yV~iF~N~Gk~~G~S~~HPH~Qi~a~~~ 165 (338)
T COG1085 117 EEVVKLWQERVRELYEREKYKYVQIFENKGKAAGASLPHPHGQIVALPV 165 (338)
T ss_pred HHHHHHHHHHHHHHhhccCcceEEeeeccCcccCccCCCCCcceeeccc
Confidence 77776 4555556666532 3466777211 114688888876554
|
|
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=82.33 E-value=3.6 Score=39.78 Aligned_cols=114 Identities=12% Similarity=0.190 Sum_probs=53.3
Q ss_pred EEEEcCCCCC-hHHHHHHHHHHhhh---cCCCcEEEEecCCCCCCh------------hh----HHHHHHHhcccCCCCc
Q 008885 6 ILLCGDVLGR-LNQLFKRVQSVNKS---AGPFDAVLCVGQFFPDSS------------EL----LDEFMNYVEGRSEIPI 65 (550)
Q Consensus 6 ILv~GDvhG~-~~~l~~kv~~l~~k---~GpfD~li~~GDff~~~~------------~~----~~~~~~~l~g~~~~p~ 65 (550)
|++++|+|=. =...++.+..+-.. ..+.+++|++|+|..... .. ...+..++.. ....+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~ 79 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLES-ILPST 79 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCC-CHCCS
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhh-ccccc
Confidence 5677777654 22234444444432 236799999999976311 01 1122233321 22347
Q ss_pred cEEEEecCCCChHHHHHHhhccccccCcccC-CceecC--cEEEcCCCCeEEEcCeEEEEEeCc
Q 008885 66 PTYFIGDYGVGAAKVLLAASKNSANQGFKMD-GFKVTD--NLFWLKGSGNFTLHGLSVAYLSGR 126 (550)
Q Consensus 66 ptyfv~GNhe~~~~~l~~l~~~~~~~~~~~~-g~ei~~--Nl~~Lg~~gv~~i~GlrIa~lgG~ 126 (550)
.+++|+|++|.... ..++.... ... -..+.. ++.++..=-.+.++|++|+..+|-
T Consensus 80 ~vvlvPg~~D~~~~--~~lPq~pl----~~~~~~~~~~~~~~~~~sNP~~~~i~~~~i~~~s~d 137 (209)
T PF04042_consen 80 QVVLVPGPNDPTSS--PVLPQPPL----HSKLFPKLKKYSNIHFVSNPCRISINGQEIGVTSGD 137 (209)
T ss_dssp EEEEE--TTCTT-S---SCSB--------TTTTCHHCTTTTEEE--CSEEEEETTEEEEE-SSH
T ss_pred EEEEeCCCcccccc--CCCCCCCC----CHHHHhhhhhcCceEEeCCCeEEEEeCCcEEEECCc
Confidence 89999998875433 11221000 000 001112 277776656678999999998884
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A Length = 77 | Back alignment and structure |
|---|
Score = 61.9 bits (150), Expect = 2e-12
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRHDTDA------REQCLRGVCLDFIIKGKCEKGPECSYKH 367
++C + SG C G KC F H + +C F ++G+C G C + H
Sbjct: 13 ELCRTYSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFKLQGRCPYGSRCHFIH 72
Query: 368 SLQND 372
+ D
Sbjct: 73 NPTED 77
|
| >2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens} Length = 72 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 2e-09
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 301 SQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKG 360
H G+ +C ++ G C +G++C F H+ D + C + G+C
Sbjct: 4 HHHHHSHMSGEKTVVCKHWL-RGLCKKGDQCEFLHEYDMTKM---SECYFYSKFGEC-SN 58
Query: 361 PECSYKH 367
EC + H
Sbjct: 59 KECPFLH 65
|
| >2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 77 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 2e-09
Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 309 GGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHS 368
G+ +C ++ G C +G++C F H+ D + C + G+C EC + H
Sbjct: 6 SGEKTVVCKHWLR-GLCKKGDQCEFLHEYDMTKM---PECYFYSKFGEC-SNKECPFLHI 60
Query: 369 LQNDDSQ 375
+
Sbjct: 61 DPESKIK 67
|
| >2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1 Length = 98 | Back alignment and structure |
|---|
Score = 51.6 bits (123), Expect = 1e-08
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQNDD 373
++C KF +G C R E C + H C + G C G +C + H ++
Sbjct: 14 ELC-KFYITGFCARAENCPYMHGDF--------PCKLYHTTGNCINGDDCMFSHDPLTEE 64
Query: 374 SQ 375
++
Sbjct: 65 TR 66
|
| >2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1 Length = 98 | Back alignment and structure |
|---|
Score = 38.5 bits (89), Expect = 5e-04
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 312 GDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECS 364
GD C + +G+C G+ C F HD E LD ++ E G E
Sbjct: 35 GDFPCKLYHTTGNCINGDDCMFSHDPLTEETR---ELLDKMLADDAEAGAEDE 84
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 2e-06
Identities = 78/582 (13%), Positives = 148/582 (25%), Gaps = 198/582 (34%)
Query: 6 ILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFF-----PDSSELLDEF------- 53
I++ D + +LF + S + V +F + L+
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQEEM--------VQKFVEEVLRINYKFLMSPIKTEQRQP 105
Query: 54 ----MNYVEGRSEI-----PIPTYF----------------------IGDYGV-GAAK-V 80
Y+E R + Y + GV G+ K
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW 165
Query: 81 LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL---------SGRQSSEG 131
+ S KMD FK+ FWL N + L + S+
Sbjct: 166 VALDVCLSYKVQCKMD-FKI----FWLN-LKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219
Query: 132 QQFGTYSQDDV-DALRALAEEPGIVD--LFLTNEWPSGVTNKAAASD----MLVGISDSS 184
+ LR L + + L L N + N A + +L+
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN---AFNLSCKILLTTRFKQ 276
Query: 185 NTDSTVSELVAEIKPRYHIAG-----SKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQ 239
TD + I +H K + ++L P
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLL--------------LKYLDCRP------- 315
Query: 240 KFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYD 299
L P T + +S+ A+ D ++ W++
Sbjct: 316 ---QDL-PREVLTTNPRRLSI---------------------IAESIRDGLATWDNWKH- 349
Query: 300 VSQKRQKHGGGDGDKMCFKFIYSGSC-PRGEKCN-FRHDT------------DAREQCLR 345
V+ + + + ++ + F D + +
Sbjct: 350 VNCDKLTT----IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVM 405
Query: 346 GVCLDFIIKGKCEKGP-ECSYK-HSLQ------NDDSQRTHRS--ENASANRSKECWFCL 395
V EK P E + S+ ++ HRS ++ + ++ + L
Sbjct: 406 VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDD-L 464
Query: 396 SSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSL 455
P ++ Y+Y + H H+ N E
Sbjct: 465 IPPYLDQ--------YFYSHIG-------H-------HLKNI---------EHPERMTLF 493
Query: 456 MMYYKNQGKEAVFFEWLSKRGTHANLQAVPIPTSKAAAVQDI 497
M + + F +L ++ H + A S +Q +
Sbjct: 494 RMVFLD-------FRFLEQKIRHDST-AWNASGSILNTLQQL 527
|
| >3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis} Length = 218 | Back alignment and structure |
|---|
Score = 47.7 bits (113), Expect = 3e-06
Identities = 21/93 (22%), Positives = 30/93 (32%), Gaps = 13/93 (13%)
Query: 387 RSKECWFC-LSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECE 445
S F + S E L+V+ G+ Y L P H++V+P V +
Sbjct: 67 ASPAQPFTEIPQLSDEEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRRVSELEDLTDLES 126
Query: 446 KELGRFQNSLMMYYK------------NQGKEA 466
EL F + K N G A
Sbjct: 127 AELMAFTQKAIRVIKNVSRPHGFNVGLNLGTSA 159
|
| >1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A* Length = 147 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 9e-06
Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 14/89 (15%)
Query: 390 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELG 449
F ++ ++ E + + + P+V HVLV P+ V P+ +L
Sbjct: 2 SFRFG--QHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLF 59
Query: 450 RF----QNSLMMYYK--------NQGKEA 466
+ + ++ G EA
Sbjct: 60 QTTQRVGTVVEKHFHGTSLTFSMQDGPEA 88
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 550 | |||
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.81 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.75 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.74 | |
| 3imi_A | 147 | HIT family protein; structural genomics, infectiou | 99.57 | |
| 1y23_A | 145 | HIT, histidine triad protein; HIT protein, PKCI-1, | 99.57 | |
| 3o0m_A | 149 | HIT family protein; ssgcid, NIH, niaid, SBRI, UW, | 99.56 | |
| 3lb5_A | 161 | HIT-like protein involved in cell-cycle regulatio; | 99.56 | |
| 3n1s_A | 119 | HIT-like protein HINT; histidine triad nucleotide | 99.56 | |
| 2oik_A | 154 | Histidine triad (HIT) protein; HIT-like fold, stru | 99.55 | |
| 3p0t_A | 138 | Uncharacterized protein; ssgcid, HIT-like protein, | 99.54 | |
| 3l7x_A | 173 | SMU.412C, putative HIT-like protein involved in ce | 99.53 | |
| 4egu_A | 119 | Histidine triad (HIT) protein; structural genomics | 99.53 | |
| 3oj7_A | 117 | Putative histidine triad family protein; hydrolase | 99.52 | |
| 3r6f_A | 135 | HIT family protein; structural genomics, seattle s | 99.52 | |
| 3ano_A | 218 | AP-4-A phosphorylase; diadenosine polyphosphate, H | 99.52 | |
| 2eo4_A | 149 | 150AA long hypothetical histidine triad nucleotid | 99.52 | |
| 3o1c_A | 126 | Histidine triad nucleotide-binding protein 1; hydr | 99.48 | |
| 1xqu_A | 147 | HIT family hydrolase; protein STRU initiative, PSI | 99.47 | |
| 3ksv_A | 149 | Uncharacterized protein; HIT family, structural ge | 99.47 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.44 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.34 | |
| 1fit_A | 147 | FragIle histidine protein; FHIT, fragIle histidine | 99.3 | |
| 3ohe_A | 137 | Histidine triad (HIT) protein; structural genomics | 99.22 | |
| 3i24_A | 149 | HIT family hydrolase; structural genomics, PSI-2, | 99.2 | |
| 1ems_A | 440 | Nitfhit, NIT-fragIle histidine triad fusion protei | 99.2 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.15 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.13 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.08 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.02 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 98.99 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 98.96 | |
| 3nrd_A | 135 | Histidine triad (HIT) protein; structural genomics | 98.94 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 98.92 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 98.92 | |
| 1z84_A | 351 | Galactose-1-phosphate uridyl transferase-like prot | 98.92 | |
| 1gup_A | 348 | Galactose-1-phosphate uridylyltransferase; nucleot | 98.91 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 98.85 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 98.85 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.8 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 98.79 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 98.79 | |
| 3i4s_A | 149 | Histidine triad protein; hydrolase, phosphatase, H | 98.78 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 98.77 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 98.76 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.63 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.39 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 98.35 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.34 | |
| 3sp4_A | 204 | Aprataxin-like protein; HIT domain, zinc finger, D | 98.33 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 98.24 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.16 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.15 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.12 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 98.06 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 97.99 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.93 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.88 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 97.82 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 97.63 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 97.61 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 97.58 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 97.57 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 97.56 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 97.55 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 97.51 | |
| 1z84_A | 351 | Galactose-1-phosphate uridyl transferase-like prot | 97.51 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 97.42 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 97.37 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 97.36 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 97.3 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 97.29 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 97.1 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 97.07 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 96.82 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 96.04 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 95.74 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 95.73 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 95.06 | |
| 1m9o_A | 77 | Tristetraproline; Cys3His type zinc finger, metal | 94.43 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 93.47 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 93.14 | |
| 3bl9_A | 301 | Scavenger mRNA-decapping enzyme DCPS; ligand compl | 91.5 | |
| 1vlr_A | 350 | MRNA decapping enzyme; 16740816, structural genomi | 90.59 | |
| 3d2q_A | 70 | Muscleblind-like protein 1; tandem zinc finger dom | 88.3 | |
| 2cqe_A | 98 | KIAA1064 protein; CCCH zinc-finger, structural gen | 86.87 | |
| 1gup_A | 348 | Galactose-1-phosphate uridylyltransferase; nucleot | 86.77 | |
| 3d2n_A | 83 | Muscleblind-like protein 1; tandem zinc finger dom | 84.82 | |
| 2d9n_A | 77 | Cleavage and polyadenylation specificity factor, 3 | 83.6 | |
| 2rpp_A | 89 | Muscleblind-like protein 2; zinc finger domain, C3 | 80.88 | |
| 2e5s_A | 98 | Otthump00000018578; ZF-CCCHX2 domain, muscleblind- | 80.33 |
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-19 Score=182.59 Aligned_cols=205 Identities=13% Similarity=0.110 Sum_probs=134.6
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhcccCCCC-ccEEEEecCCCCh--H
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGRSEIP-IPTYFIGDYGVGA--A 78 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~-~~~~~~~~~l~g~~~~p-~ptyfv~GNhe~~--~ 78 (550)
.|||++++|+|++...+ +..+.|+||++||++.... .+...+.++|. +++ .++|+|.||||.. .
T Consensus 59 ~mri~~iSD~H~~~~~l---------~i~~~D~vi~aGDl~~~g~~~e~~~~~~~L~---~l~~~~v~~V~GNHD~~~d~ 126 (296)
T 3rl5_A 59 HTRFVCISDTRSRTDGI---------QMPYGDILLHTGDFTELGLPSEVKKFNDWLG---NLPYEYKIVIAGNHELTFDK 126 (296)
T ss_dssp EEEEEEEBCCTTCCTTC---------CCCSCSEEEECSCCSSSCCHHHHHHHHHHHH---TSCCSEEEECCCTTCGGGCH
T ss_pred CeEEEEEeeCCCCcchh---------ccCCCCEEEECCcccCCCCHHHHHHHHHHHH---hCCCCeEEEEcCCcccccch
Confidence 48999999999987542 1235799999999976432 23345666663 444 4589999999964 2
Q ss_pred HHHHHhhccccc--c---Cc----ccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHH-HHHh
Q 008885 79 KVLLAASKNSAN--Q---GF----KMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDA-LRAL 148 (550)
Q Consensus 79 ~~l~~l~~~~~~--~---~~----~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~-L~~l 148 (550)
.+++.+...... . +. ..+...+..+++||.. ++++++|++|+|.+++ ++.+.+.|.+++.+. +..+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~-~~~~i~Gl~i~Gsp~t---P~~~~~~f~~~~~~~~~~~~ 202 (296)
T 3rl5_A 127 EFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQD-SEVTVKGFRIYGAPWT---PWFNGWGFNLPRGQSLLDKW 202 (296)
T ss_dssp HHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSS-EEEEETTEEEEEECCB---CC--CCTTBCCTTHHHHHHH
T ss_pred hhhhhhhcccccccccccccccchhhhHhhhcCCeEEecC-CcEEECCEEEEEecCC---CCCCCcCCCcchHHHHHHHH
Confidence 333333100000 0 00 0011234578899995 6668999999986664 223345554433333 3334
Q ss_pred hcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHH-HHhCCCEEEEccCCCccccccccCCCCcceeEE
Q 008885 149 AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELV-AEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRF 227 (550)
Q Consensus 149 ~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~-~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRF 227 (550)
.....++||||||.+|+++.+.... . ..++|+..+.+++ ++.+|+||++||.|..+... ....|.|
T Consensus 203 ~~ip~~~dILvTH~PP~g~~D~~~~----~---~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~------~~g~t~v 269 (296)
T 3rl5_A 203 NLIPEGTDILMTHGPPLGFRDWVPK----E---LQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM------TDGYTTY 269 (296)
T ss_dssp TTSCTTCSEEEESSCBTTSSCEEGG----G---TEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE------ECSSCEE
T ss_pred hhCCCCCeEEEECCCcccccccccc----c---cCcCChHHHHHHHHHhcCCCEEEECCccCCCceE------EECCEEE
Confidence 4456789999999999999764310 0 1368999999999 69999999999988655421 2457999
Q ss_pred EEcCCCCCc
Q 008885 228 LGLAPVGNK 236 (550)
Q Consensus 228 I~La~~g~~ 236 (550)
||.|.++..
T Consensus 270 vNpGs~~~~ 278 (296)
T 3rl5_A 270 INASTCTVS 278 (296)
T ss_dssp EECBCSCTT
T ss_pred EECCcCCcC
Confidence 999999863
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-17 Score=164.05 Aligned_cols=206 Identities=14% Similarity=0.104 Sum_probs=129.1
Q ss_pred CC--CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhH-------------------------HHH
Q 008885 1 MS--PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELL-------------------------DEF 53 (550)
Q Consensus 1 M~--~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~-------------------------~~~ 53 (550)
|+ .|||++++|+|++.+.+.+.++.++.. +.|+||++||++....... +.+
T Consensus 1 ~~~~~mri~~iSDlH~~~~~~~~~l~~~~~~--~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 78 (260)
T 2yvt_A 1 MGIMPRKVLAIKNFKERFDLLPKLKGVIAEK--QPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETL 78 (260)
T ss_dssp ---CCCEEEEEECCTTCGGGHHHHHHHHHHH--CCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred CCcceEEEEEEeecCCChHHHHHHHHHHHhc--CCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHH
Confidence 55 589999999999987765555555433 4799999999987532200 223
Q ss_pred HHHhcccCCCCccEEEEecCCCChHHH--HHHhhccccccCcccCCceecCcEEEcCCCCe-EEEcCeEEEEEeCccCCC
Q 008885 54 MNYVEGRSEIPIPTYFIGDYGVGAAKV--LLAASKNSANQGFKMDGFKVTDNLFWLKGSGN-FTLHGLSVAYLSGRQSSE 130 (550)
Q Consensus 54 ~~~l~g~~~~p~ptyfv~GNhe~~~~~--l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv-~~i~GlrIa~lgG~~~~~ 130 (550)
.+++....+.++|+|+|+||||..... .+.+.. .+ +.+|+.+|.. .. ++++|++|+++|+....+
T Consensus 79 ~~~l~~l~~~~~pv~~v~GNHD~~~~~~~~~~~~~---------~~--~~~~~~~l~~-~~~~~~~~~~i~g~~~~~~~~ 146 (260)
T 2yvt_A 79 DKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEA---------ET--AYPNIRVLHE-GFAGWRGEFEVIGFGGLLTEH 146 (260)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSCCHHHHHHHHHHT---------TT--TCTTEEECSS-EEEEETTTEEEEEECSEEESS
T ss_pred HHHHHHHHhcCCcEEEEcCCCCchhhhhHHHHhhh---------cc--CCcceEEecC-cceEEECCEEEEecCCCcCCC
Confidence 444433345578999999999975321 122221 11 2467788864 44 678899999999875322
Q ss_pred CCCCCCCC----HHHHHHHHHhhcCCCCccEEEeCCCCccc-cccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEc
Q 008885 131 GQQFGTYS----QDDVDALRALAEEPGIVDLFLTNEWPSGV-TNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAG 205 (550)
Q Consensus 131 ~~~~~~~t----e~di~~L~~l~~~~~~vDILLTh~wP~gi-~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~G 205 (550)
.-...... -...+.|..+.......+||+||.+|.+. .+.. +.. ....|+..+.+++++.+|+++++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~Il~~H~pp~~~~~d~~-----~~~--~~~~~~~~l~~~~~~~~~~~vl~G 219 (260)
T 2yvt_A 147 EFEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFVDRT-----PED--PKHHGSAVVNTIIKSLNPEVAIVG 219 (260)
T ss_dssp CCBSSSSCEEEHHHHHHHGGGGGGSCCCEEEEEESSCCSCSSTTCB-----TTB--SCCCSCHHHHHHHHHHCCSEEEEC
T ss_pred CcCHHHHhhcchhhHHHHHHHHHhcCCCCEEEEECCCccccccccC-----ccc--ccccCcHHHHHHHHHhCCCEEEEC
Confidence 10000111 00002232222223467899999999875 2211 000 136799999999999999999999
Q ss_pred cCCCccccccccCCCCcceeEEEEcCCCCC
Q 008885 206 SKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 206 h~~~f~er~Py~~~~~~~~TRFI~La~~g~ 235 (550)
|.|.... ....|++||.|.++.
T Consensus 220 H~H~~~~--------~~~~~~~in~Gs~~~ 241 (260)
T 2yvt_A 220 HVGKGHE--------LVGNTIVVNPGEFEE 241 (260)
T ss_dssp SSCCEEE--------EETTEEEEECCBGGG
T ss_pred CccCCcE--------EeCCEEEEeCCCCCC
Confidence 9983322 134588999999874
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.7e-17 Score=158.84 Aligned_cols=194 Identities=18% Similarity=0.169 Sum_probs=125.0
Q ss_pred CC--CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCC--hhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 1 MS--PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDS--SELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 1 M~--~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~--~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
|. +|||+++||+|+++..+-+.++.+++. ++|+||++||++... .....++.+.+ .+.++|+|+|+||||.
T Consensus 1 ~~~~~mri~~iSD~H~~~~~~~~~~~~~~~~--~~D~vi~~GDl~~~~~~~~~~~~~~~~l---~~~~~pv~~v~GNHD~ 75 (228)
T 1uf3_A 1 MRRTVRYILATSNPMGDLEALEKFVKLAPDT--GADAIALIGNLMPKAAKSRDYAAFFRIL---SEAHLPTAYVPGPQDA 75 (228)
T ss_dssp CCCCCCEEEEEECCTTCHHHHHHHHTHHHHH--TCSEEEEESCSSCTTCCHHHHHHHHHHH---GGGCSCEEEECCTTSC
T ss_pred CccceEEEEEEeeccCCHHHHHHHHHHHhhc--CCCEEEECCCCCCCCCCHHHHHHHHHHH---HhcCCcEEEECCCCCc
Confidence 65 479999999999987654444444332 479999999997643 12122344444 4567899999999997
Q ss_pred hHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEc-CeEEEEEeCccCCCCCCCCCCCHHHH--------HHHHH
Q 008885 77 AAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLH-GLSVAYLSGRQSSEGQQFGTYSQDDV--------DALRA 147 (550)
Q Consensus 77 ~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~-GlrIa~lgG~~~~~~~~~~~~te~di--------~~L~~ 147 (550)
... +.+... + ....+.+++++|.. ..++++ +++|++++|....+. .++++++ ..+..
T Consensus 76 ~~~--~~~~~~-~------~~~~~~~~~~~l~~-~~~~~~~~~~i~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 141 (228)
T 1uf3_A 76 PIW--EYLREA-A------NVELVHPEMRNVHE-TFTFWRGPYLVAGVGGEIADEG----EPEEHEALRYPAWVAEYRLK 141 (228)
T ss_dssp SHH--HHHHHH-H------HHHHHCTTEEECBT-SEEEETTTEEEEEECSEEESSS----CCBSSSSCEEEHHHHHHHHG
T ss_pred hhH--HHHHhh-h------hhhccCcceEEccc-ceEeeCCCcEEecCCCCcCCCC----ccChhhcccchhhhHHHHHH
Confidence 542 222110 0 00112356677763 556777 999999998653221 1222211 11111
Q ss_pred -hhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeE
Q 008885 148 -LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTR 226 (550)
Q Consensus 148 -l~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TR 226 (550)
+.......+||+||.+|.+.. . ...|+..+.++++..+|+++++||.|.... ....|+
T Consensus 142 ~l~~~~~~~~il~~H~p~~~~~---~----------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~--------~~~~~~ 200 (228)
T 1uf3_A 142 ALWELKDYPKIFLFHTMPYHKG---L----------NEQGSHEVAHLIKTHNPLLVLVAGKGQKHE--------MLGASW 200 (228)
T ss_dssp GGGGSCSCCEEEEESSCBCBTT---T----------BTTSBHHHHHHHHHHCCSEEEECCSSCEEE--------EETTEE
T ss_pred HHHhCCCCCeEEEEccCcccCC---c----------cccCHHHHHHHHHHhCCCEEEEcccccCcc--------ccCCce
Confidence 222234589999999998751 1 246889999999999999999999983332 234689
Q ss_pred EEEcCCCC
Q 008885 227 FLGLAPVG 234 (550)
Q Consensus 227 FI~La~~g 234 (550)
+||.|+++
T Consensus 201 ~in~Gs~~ 208 (228)
T 1uf3_A 201 VVVPGDLS 208 (228)
T ss_dssp EEECCBGG
T ss_pred EEEecccC
Confidence 99999986
|
| >3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-15 Score=137.18 Aligned_cols=105 Identities=18% Similarity=0.188 Sum_probs=82.4
Q ss_pred ccCCCCCCcccCCCC-CCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHh--
Q 008885 384 SANRSKECWFCLSSP-SVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK-- 460 (550)
Q Consensus 384 ~~~~~~~C~FC~~~~-~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~-- 460 (550)
+...+++|.||.+.. ..+ ..||+.++.++++++..|..|||+||||.+|++++.+|+++++.+|....+.+.+.+.
T Consensus 4 ~~~~m~~CifC~i~~~e~~-~~iV~e~~~~~a~~d~~p~~pgh~lViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~ 82 (147)
T 3imi_A 4 MNHTADNCIFCKIIDGQIL-CSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAE 82 (147)
T ss_dssp -CCCGGGCHHHHHHTTSSC-CCEEEECSSEEEEECTTCSSTTCEEEEESSCCCSGGGCCHHHHHHHHHTHHHHHHHHHHH
T ss_pred hhcccCCCcCcccccCCCc-CCEEEECCCEEEEEcCCCCCCcEEEEEEeeccCChhhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 344567899998743 344 4689999999999999999999999999999999999999999998877666665544
Q ss_pred --hcCCceEEEe--ecCCCcCeEEEEEeecCCC
Q 008885 461 --NQGKEAVFFE--WLSKRGTHANLQAVPIPTS 489 (550)
Q Consensus 461 --~~~~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (550)
..|+++++.. ...+.+.|+|+|+||+...
T Consensus 83 ~~~~~~ni~~n~g~~aGq~v~HlHiHiiPR~~~ 115 (147)
T 3imi_A 83 FNPVGFNLLNNNGEKAGQTVFHFHLHLIPRYGE 115 (147)
T ss_dssp HCCSEEEEEEEESGGGTCCSSSCCEEEEEECST
T ss_pred cCCCCEEEEEeCCcccCCCcCEEEEEEeCCccC
Confidence 4455655554 2345578999999998653
|
| >1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.8e-15 Score=138.03 Aligned_cols=101 Identities=18% Similarity=0.220 Sum_probs=79.3
Q ss_pred CCCCcccCCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHH----Hhhc
Q 008885 388 SKECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMY----YKNQ 462 (550)
Q Consensus 388 ~~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~----~~~~ 462 (550)
+++|+||.+. ...+ ..||+.++.++++++.+|..+||+||||.+|++++.+|+++++.+|....+.+.+. |...
T Consensus 4 ~~~C~fC~i~~~e~~-~~iv~e~~~~~a~~~~~p~~pgh~LViPk~h~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~ 82 (145)
T 1y23_A 4 AENCIFCKIIAGDIP-SAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPI 82 (145)
T ss_dssp -CCCHHHHHHHTSSC-CCEEEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHCCS
T ss_pred CCCCcCCccccCCCC-CCEEEECCCEEEEECCCCCCCCeEEEEEhhhhhhHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4579999864 3333 47889999999999999999999999999999999999999988887655555544 4445
Q ss_pred CCceEEEe--ecCCCcCeEEEEEeecCCC
Q 008885 463 GKEAVFFE--WLSKRGTHANLQAVPIPTS 489 (550)
Q Consensus 463 ~~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (550)
|+++++.. ...+...|+|+|+||+...
T Consensus 83 ~~ni~~n~g~~~g~~v~HlH~HiiPr~~~ 111 (145)
T 1y23_A 83 GLNTLNNNGEKAGQSVFHYHMHIIPRYGK 111 (145)
T ss_dssp EEEEEEEESGGGTCCSSSCCEEEEEECST
T ss_pred CEEEEEcCCcCCCCCcCEEEEEEEccccC
Confidence 66666655 2334578999999997654
|
| >3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=99.56 E-value=4.5e-15 Score=136.27 Aligned_cols=102 Identities=20% Similarity=0.283 Sum_probs=80.6
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhhc--C--
Q 008885 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ--G-- 463 (550)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~--~-- 463 (550)
+.+|.||.+...-....||+.++.++++++..|..|||+||||.+|+.++.+|+++++.+|....+.+.+.+++. +
T Consensus 4 m~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~ 83 (149)
T 3o0m_A 4 SMSCVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMAAVGQRIARAARESGLHAD 83 (149)
T ss_dssp TTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCCSTTTSCHHHHHHHHHHHHHHHHHHHHSTTCCS
T ss_pred CCCCccCccccCCCCCCEEEECCCEEEEEcCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 568999986433223578999999999999999999999999999999999999999999999888888876654 2
Q ss_pred -CceEEEe--ecCCCcCeEEEEEeecCCC
Q 008885 464 -KEAVFFE--WLSKRGTHANLQAVPIPTS 489 (550)
Q Consensus 464 -~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (550)
+++++.. ...+.+.|+|+|+||+...
T Consensus 84 ~~ni~~n~g~~aGq~v~HlHiHiiPR~~~ 112 (149)
T 3o0m_A 84 GNNIAINDGKAAFQTVFHIHLHVVPRRNG 112 (149)
T ss_dssp EEEEECCCSGGGTCCSSSCCEEEEEECTT
T ss_pred ceEEEEecCCCCCCccceEEEEEECCccC
Confidence 3322222 1234478999999997554
|
| >3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=99.56 E-value=7.3e-15 Score=136.59 Aligned_cols=102 Identities=14% Similarity=0.104 Sum_probs=81.8
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHH----hhcC
Q 008885 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYY----KNQG 463 (550)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~----~~~~ 463 (550)
.++|+||.+........||+.++.+++++|..|..+||+||||.+|++++.+|+++++.+|....+.+.+.+ ...|
T Consensus 27 ~~~CiFC~i~~~e~p~~iV~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~g 106 (161)
T 3lb5_A 27 DNNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQADG 106 (161)
T ss_dssp CTTSHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSTTTSCHHHHHHHHHHHHHHHHHHHHHHTCSE
T ss_pred CCCCcccccccCCCCccEEEECCCEEEEECCCcCCCcEEEEEEeeccchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 568999987543334578999999999999999999999999999999999999999998887776666554 4456
Q ss_pred CceEEEe--ecCCCcCeEEEEEeecCCC
Q 008885 464 KEAVFFE--WLSKRGTHANLQAVPIPTS 489 (550)
Q Consensus 464 ~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (550)
+++++.. ...+.+.|+|+|+||+...
T Consensus 107 ~ni~~n~g~~aGq~V~HlHiHiiPR~~~ 134 (161)
T 3lb5_A 107 ITVMQFNEAASQQTVYHLHFHIIPRMEG 134 (161)
T ss_dssp EEEEEEESGGGTCCSCSCCEEEEEECTT
T ss_pred EEEEEecCcccCCCCCEEEEEEEcccCC
Confidence 6666555 2344578999999998553
|
| >3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=4.5e-15 Score=131.13 Aligned_cols=98 Identities=18% Similarity=0.195 Sum_probs=76.1
Q ss_pred CCCcccCCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHh-----hc
Q 008885 389 KECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK-----NQ 462 (550)
Q Consensus 389 ~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~-----~~ 462 (550)
++|.||.+- .+.+ ..||+.++.+|++++..|..|||+||||.+|++++.+|+++.+.++..+.+.+++..+ ..
T Consensus 3 ~~CiFC~I~~ge~~-~~iv~ede~~~af~d~~P~~pgH~LViPk~Hv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~~ 81 (119)
T 3n1s_A 3 EETIFSKIIRREIP-SDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAED 81 (119)
T ss_dssp CCCHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHTTCTTT
T ss_pred CCChhhhhhcCCCc-CCEEEECCCEEEEECCCCCCCCeEEEEehhHhCCHhHcCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 579999864 3333 4789999999999999999999999999999999999999977666665555544443 34
Q ss_pred CCceEEEe--ecCCCcCeEEEEEeecC
Q 008885 463 GKEAVFFE--WLSKRGTHANLQAVPIP 487 (550)
Q Consensus 463 ~~~~v~~E--~~~~~~~H~hi~~vPvp 487 (550)
|+++++.. ...+.+.|+|+|+||..
T Consensus 82 g~ni~~n~g~~agq~V~HlH~Hiipr~ 108 (119)
T 3n1s_A 82 GYRLIMNTNRHGGQEVYHIHMHLLGGR 108 (119)
T ss_dssp CEEEEEEEHHHHTCCSSSCCEEEEESS
T ss_pred CeEEEEeCCCCcCCCcCEEEEEEeCCc
Confidence 55655554 24556889999999963
|
| >2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=2.3e-14 Score=132.19 Aligned_cols=98 Identities=13% Similarity=0.106 Sum_probs=77.6
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCce
Q 008885 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEA 466 (550)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~~~~~ 466 (550)
+.+|+||...+ ..||+.+++++++++.+|..|||+||||++|+.++.+|+++++.+|....+.+.+.+.+ .+...
T Consensus 9 ~~~C~FC~~~~----~~iv~e~~~~~a~~d~~p~~pgh~LViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~g 84 (154)
T 2oik_A 9 HKNCELCTTAG----GEILWQDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMRPDK 84 (154)
T ss_dssp CTTCHHHHSCC----SEEEEECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSE
T ss_pred CCCCccCCCCC----CeEEEECCcEEEEEcCCCCCCeEEEEEecCCcCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 45799998543 47899999999999999999999999999999999999999998888777766666553 23322
Q ss_pred EEEeecCCCcCeEEEEEeecCCC
Q 008885 467 VFFEWLSKRGTHANLQAVPIPTS 489 (550)
Q Consensus 467 v~~E~~~~~~~H~hi~~vPvp~~ 489 (550)
+.+....+...|+|+|+||+...
T Consensus 85 ~ni~~~gq~v~HlHiHiiPr~~~ 107 (154)
T 2oik_A 85 INLASLGNMTPHVHWHVIPRFKR 107 (154)
T ss_dssp EEEEECCSSSCSCEEEEEEECTT
T ss_pred EEhHHhCCCCCEEEEEEeCCCCC
Confidence 22222445678999999998654
|
| >3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.1e-14 Score=131.72 Aligned_cols=98 Identities=13% Similarity=0.076 Sum_probs=80.1
Q ss_pred CCcccCCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCceE
Q 008885 390 ECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK-NQGKEAV 467 (550)
Q Consensus 390 ~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~-~~~~~~v 467 (550)
+|.||.+. .+.+ ..+|+.++.++++++..|..+||+||||.+|+.++.+|+++++.+|....+.+.+.+. ..+..-+
T Consensus 6 ~CiFC~i~~~e~p-~~iV~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ 84 (138)
T 3p0t_A 6 ASIFTKIINRELP-GRFVYEDDDVVAFLTIEPMTQGHTLVVPREEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFRTERS 84 (138)
T ss_dssp HHHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEE
T ss_pred CChhhHHhcCCCC-cCEEEeCCCEEEEecCCCCCCcEEEEEEhHHhCchhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 69999754 3444 4688999999999999999999999999999999999999999999988887777655 3455444
Q ss_pred EEeecCCCcCeEEEEEeecCC
Q 008885 468 FFEWLSKRGTHANLQAVPIPT 488 (550)
Q Consensus 468 ~~E~~~~~~~H~hi~~vPvp~ 488 (550)
.+....+.++|+|+|+||+..
T Consensus 85 n~~~~gq~v~HlH~HiiPr~~ 105 (138)
T 3p0t_A 85 GLIIAGLEVPHLHVHVFPTRS 105 (138)
T ss_dssp EEEECCSSCSSCCEEEEEESC
T ss_pred cEEECCcccCEEEEEEecccc
Confidence 454345567899999999754
|
| >3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.53 E-value=8.7e-15 Score=137.57 Aligned_cols=102 Identities=22% Similarity=0.208 Sum_probs=80.3
Q ss_pred CCCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHH----hhc
Q 008885 387 RSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYY----KNQ 462 (550)
Q Consensus 387 ~~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~----~~~ 462 (550)
.+++|+||.+........||+.++.+++++|..|..|||+||||.+|+.++.+|+++++.+|....+.+.+.+ ...
T Consensus 34 ~m~~CiFC~Ii~~e~p~~iV~e~e~~~afld~~P~~pgH~LVIPkrHv~~l~dL~~ee~~~L~~~~~~v~~~l~~~~~~~ 113 (173)
T 3l7x_A 34 SMNDCLFCKIVAGDIPSSKVYEDEDVLAFLDISQATKGHTLVIPKEHVRNALEMTQTQAANLFARIPKIARALQKATKAD 113 (173)
T ss_dssp CCTTCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHTHHHHHHHHHHHHTCS
T ss_pred CCCCCcccccccCCCCceEEEECCCEEEEEcCCCCCCcEEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3678999987533223468999999999999999999999999999999999999999988887666555544 444
Q ss_pred CCceEEEe--ecCCCcCeEEEEEeecCC
Q 008885 463 GKEAVFFE--WLSKRGTHANLQAVPIPT 488 (550)
Q Consensus 463 ~~~~v~~E--~~~~~~~H~hi~~vPvp~ 488 (550)
++++++.. ...+...|+|+|+||+..
T Consensus 114 g~ni~~n~g~~aGq~V~HlHiHiIPR~~ 141 (173)
T 3l7x_A 114 GLNIINNNEETAGQTVFHAHVHLVPRFA 141 (173)
T ss_dssp EEEEEECCSGGGTCCSCSCCEEEEEECC
T ss_pred CEEEEEecCcccCCCcCEEEEEEEeccc
Confidence 55655544 233457899999999865
|
| >4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.1e-14 Score=128.49 Aligned_cols=99 Identities=14% Similarity=0.129 Sum_probs=74.6
Q ss_pred CCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHh-----hcC
Q 008885 389 KECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK-----NQG 463 (550)
Q Consensus 389 ~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~-----~~~ 463 (550)
.+|.||.+...-....||+.++.+++++|..|..|||+||||.+|++++.+|+++.+.++....+.+.++.+ ..|
T Consensus 4 ~~C~FC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~~~~~~~~~~~~~~~ 83 (119)
T 4egu_A 4 MDCIFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKIAKEKGFDQTG 83 (119)
T ss_dssp TTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGSCGGGTHHHHHHHHHHHHHHHHHTHHHHC
T ss_pred CCccCeecccCCCCCCEEEECCCEEEEECCCCCCCceEEEEechhhCCHhHCCHhHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 479999864332235789999999999999999999999999999999999998865555555444443333 346
Q ss_pred CceEEEe--ecCCCcCeEEEEEeecC
Q 008885 464 KEAVFFE--WLSKRGTHANLQAVPIP 487 (550)
Q Consensus 464 ~~~v~~E--~~~~~~~H~hi~~vPvp 487 (550)
+++++.. ...+...|+|+|+||..
T Consensus 84 ~ni~~n~g~~agq~v~HlH~Hiip~~ 109 (119)
T 4egu_A 84 FRVINNCGSDGGQEVKHLHYHILAGK 109 (119)
T ss_dssp EEEEEEETTTTTCCSCSCCEEEEESS
T ss_pred EEEEEeCCCCCCCCcCEEEEEEeCCc
Confidence 6665554 23345789999999974
|
| >3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=7.5e-15 Score=129.18 Aligned_cols=99 Identities=19% Similarity=0.253 Sum_probs=73.1
Q ss_pred CCC-CcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh---cC
Q 008885 388 SKE-CWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN---QG 463 (550)
Q Consensus 388 ~~~-C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~---~~ 463 (550)
+++ |.||.+........||+.++.++++++..|..+||+||||.+|++++.+|+++.++++....+.+.++.++ .|
T Consensus 5 m~~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~g 84 (117)
T 3oj7_A 5 MADSCIFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVSLIGKKECPEG 84 (117)
T ss_dssp ----CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCTTTHHHHHHHHHHHHHHHHHHCTTC
T ss_pred cCCCCcccccccCCCCCCEEEECCcEEEEECCCCCCCceEEEEechHhCCHHHCCHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 345 99998743323457999999999999999999999999999999999999988777777666655555443 24
Q ss_pred CceEEEe--ecCCCcCeEEEEEeec
Q 008885 464 KEAVFFE--WLSKRGTHANLQAVPI 486 (550)
Q Consensus 464 ~~~v~~E--~~~~~~~H~hi~~vPv 486 (550)
+++++.. ...+...|+|+|+||.
T Consensus 85 ~ni~~n~g~~agq~v~H~H~Hiipr 109 (117)
T 3oj7_A 85 YRVVNNIGEDAGQTVKHIHFHILGG 109 (117)
T ss_dssp EEEECCCSTTTTCCSSSCCEEEEES
T ss_pred eEEEEcCCCCCCeeeeEEEEEEeCC
Confidence 4443332 1234468999999996
|
| >3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.1e-15 Score=136.23 Aligned_cols=100 Identities=18% Similarity=0.260 Sum_probs=81.7
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCceE
Q 008885 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAV 467 (550)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~~~~~v 467 (550)
+++|.||.+.. ....||+.++.++++++..|..+||+||||.+|+.++.+|+++++.+|....+.+.+.+...+++++
T Consensus 5 ~~~C~fC~i~~--~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~~~~~~~ni~ 82 (135)
T 3r6f_A 5 MEGCIFCTLYR--KGANIIYETDRLFALIDRYPLSKGHFLVIPKAHHPYLHNYKPEELSGVLDTIRHLVQKFGFERYNIL 82 (135)
T ss_dssp -CCCHHHHHHH--HCCSCCEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCGGGGTTHHHHHHHHHHHHTCCSEEEE
T ss_pred CCCCcCccccc--CCceEEEECCCEEEEECCCCCCCCeEEEEEhhHhCCHhHCCHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 56899998743 3346889999999999999999999999999999999999999999999988888888876665544
Q ss_pred EEeecCCCcCeEEEEEeecCCC
Q 008885 468 FFEWLSKRGTHANLQAVPIPTS 489 (550)
Q Consensus 468 ~~E~~~~~~~H~hi~~vPvp~~ 489 (550)
+.....+...|+|+|+||+...
T Consensus 83 ~n~g~gq~v~HlH~HiiPR~~~ 104 (135)
T 3r6f_A 83 QNNGNHQEVFHVHFHVIPFVSA 104 (135)
T ss_dssp CCSSSSCSSSSCCEEEEECCBT
T ss_pred EEcCCCCCccEEEEEEeccccC
Confidence 3331234478999999998654
|
| >3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.52 E-value=1e-14 Score=141.71 Aligned_cols=102 Identities=22% Similarity=0.186 Sum_probs=81.2
Q ss_pred CCCCcccCCCCC-CCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh----c
Q 008885 388 SKECWFCLSSPS-VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----Q 462 (550)
Q Consensus 388 ~~~C~FC~~~~~-~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~----~ 462 (550)
.++|+||.+... .....||+.++.+|++++.+|+++||+||||++|++++.+|+++++.+|..+.+.+.+.+++ .
T Consensus 68 ~~~CiFC~i~~~e~~~~~iV~edd~~~afld~~P~~pGH~LVIPkrHv~~l~dL~~ee~~~L~~l~~~v~~~l~~~~~~~ 147 (218)
T 3ano_A 68 SPAQPFTEIPQLSDEEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRRVSELEDLTDLESAELMAFTQKAIRVIKNVSRPH 147 (218)
T ss_dssp --CCHHHHGGGSCHHHHTEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHCCCS
T ss_pred CCCCcCcccccCCCCCceEEEECCcEEEEEccCCCCCcEEEEEechhhCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 457999987643 34568999999999999999999999999999999999999999999999877776666554 3
Q ss_pred CCceEEEe--ecCCCc-CeEEEEEeecCCC
Q 008885 463 GKEAVFFE--WLSKRG-THANLQAVPIPTS 489 (550)
Q Consensus 463 ~~~~v~~E--~~~~~~-~H~hi~~vPvp~~ 489 (550)
|++++++. ...+.. .|+|+|+||+...
T Consensus 148 g~ni~~n~G~~aGq~V~~HlHiHIIPR~~g 177 (218)
T 3ano_A 148 GFNVGLNLGTSAGGSLAEHLHVHVVPRWGG 177 (218)
T ss_dssp EEEEEEEESGGGTCTTTTSCCEEEEEECTT
T ss_pred CEEEEEecCcccCCcccCEEEEEEEcccCC
Confidence 45555554 123445 8999999998654
|
| >2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.52 E-value=1e-14 Score=133.79 Aligned_cols=98 Identities=22% Similarity=0.289 Sum_probs=77.6
Q ss_pred CcccCCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh----cCCc
Q 008885 391 CWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGKE 465 (550)
Q Consensus 391 C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~----~~~~ 465 (550)
|+||.+. ...+ ..||+.++.++++++..|..+||+||||.+|++++.+|+++++.+|....+.+.+.+.+ .|++
T Consensus 1 CiFC~i~~~e~~-~~iv~e~~~~~a~~d~~p~~pgh~lViPk~H~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~n 79 (149)
T 2eo4_A 1 CTFCSIINRELE-GYFVYEDEKFAAILDKYPVSLGHTLVIPKKHFENYLEADEDTLAELAKVVKLVSLGIKDAVKADGLR 79 (149)
T ss_dssp CHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred CcCcccccCCCC-ccEEEECCCEEEEECCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHhcCCCCeE
Confidence 9999864 3343 47889999999999999999999999999999999999999999998877777666553 3444
Q ss_pred eEEEe--ecCCCcCeEEEEEeecCCC
Q 008885 466 AVFFE--WLSKRGTHANLQAVPIPTS 489 (550)
Q Consensus 466 ~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (550)
+++.. ...+...|+|+|+||+...
T Consensus 80 i~~n~g~~~gq~v~HlHiHviPr~~~ 105 (149)
T 2eo4_A 80 LLTNIGRSAGQVIFHLHVHIIPTWEG 105 (149)
T ss_dssp EECCCSGGGTCCSCSCCEEEEEECSS
T ss_pred EEEecCcCCCCCcCEEEEEEECCcCC
Confidence 44333 1234478999999997643
|
| >3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A | Back alignment and structure |
|---|
Probab=99.48 E-value=2.3e-14 Score=127.81 Aligned_cols=98 Identities=17% Similarity=0.123 Sum_probs=74.3
Q ss_pred CCCCcccCCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh----c
Q 008885 388 SKECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----Q 462 (550)
Q Consensus 388 ~~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~----~ 462 (550)
.++|.||.+- .+.+ ..||+.++.++++++..|..+||+||||.+|+.++.+|+++.+.++..+.+.++++.+. .
T Consensus 14 ~~~CiFC~i~~~e~~-~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~~ 92 (126)
T 3o1c_A 14 GGDTIFGKIIRKEIP-AKIIFEDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLKK 92 (126)
T ss_dssp TCSSHHHHHHHTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCCCGGGCCGGGHHHHHHHHHHHHHHHHHTTCTT
T ss_pred CCCCCcchhhcCCCc-CCEEEECCCEEEEECCCCCCCceEEEEechHhchHhhCchhHHHHHHHHHHHHHHHHHHhCCCC
Confidence 5689999864 3344 47899999999999999999999999999999999999988766666655444444333 3
Q ss_pred CCceEEEe--ecCCCcCeEEEEEeec
Q 008885 463 GKEAVFFE--WLSKRGTHANLQAVPI 486 (550)
Q Consensus 463 ~~~~v~~E--~~~~~~~H~hi~~vPv 486 (550)
|+++++.. ...+.+.|+|+|+||.
T Consensus 93 g~ni~~n~g~~agq~v~HlH~Hiipr 118 (126)
T 3o1c_A 93 GYRMVVNEGSDGGQSVYHVHLHVLGG 118 (126)
T ss_dssp CEEEECCCHHHHTCCSSSCCEEEEES
T ss_pred CeEEEEecCCccCCccCEeEEEEeCC
Confidence 45544333 2245578999999996
|
| >1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1 | Back alignment and structure |
|---|
Probab=99.47 E-value=2.3e-14 Score=131.19 Aligned_cols=100 Identities=17% Similarity=0.128 Sum_probs=76.3
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC----
Q 008885 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQG---- 463 (550)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~~---- 463 (550)
+++|+||.+........||+.++.+++++|.+|..|||+||||++|++++.+|+++.+.++..+.+.++++.+..+
T Consensus 34 m~~CiFC~ii~~e~~~~iV~e~e~~~af~d~~P~~pgH~LViPkrHv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~~ 113 (147)
T 1xqu_A 34 LENCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILIDIHKAANKVAEDLGIAEK 113 (147)
T ss_dssp CTTCHHHHHHTTSSCBCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cCCCcccccccCCCCcEEEEECCcEEEEEecCCCCccEEEEEeCcccCChhHCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 5689999874332235799999999999999999999999999999999999988887777777766666655443
Q ss_pred -CceEEEe--ecCCCcCeEEEEEeecC
Q 008885 464 -KEAVFFE--WLSKRGTHANLQAVPIP 487 (550)
Q Consensus 464 -~~~v~~E--~~~~~~~H~hi~~vPvp 487 (550)
+++++.. ...+...|+|+|+||..
T Consensus 114 gyni~~n~g~~aGq~v~HlHlHiiP~~ 140 (147)
T 1xqu_A 114 GYRLITNCGVAAGQTVFHLHYHLLGGV 140 (147)
T ss_dssp CEEEECCCSTTTTCCSCSCCEEEEESS
T ss_pred CEEEEEecCcccCCCccEEEEEEeCCC
Confidence 3333322 11244689999999963
|
| >3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=5.1e-14 Score=129.21 Aligned_cols=100 Identities=17% Similarity=0.223 Sum_probs=80.7
Q ss_pred CCCcccCCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh-c---C
Q 008885 389 KECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-Q---G 463 (550)
Q Consensus 389 ~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~---~ 463 (550)
.+|.||.+- .+.+ ..+|+.++.+++++|..|..+||+||||.+|++++.+|+++++.+|....+.+.+.+.. . |
T Consensus 11 ~~~iFc~Ii~geip-~~iV~ed~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~g 89 (149)
T 3ksv_A 11 ANCIFCKIIKGDIP-CAKVAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVGVLLAKASRAVAGPDGSMQ 89 (149)
T ss_dssp TTCHHHHHHHTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHCTTSCCE
T ss_pred ccCHHHHHHcCCCC-ccEEEECCCEEEEECCCCCCCCEEEEEeChhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 479999864 4454 46889999999999999999999999999999999999999999999988888887764 2 3
Q ss_pred CceEEEe--ecCCCcCeEEEEEeecCCC
Q 008885 464 KEAVFFE--WLSKRGTHANLQAVPIPTS 489 (550)
Q Consensus 464 ~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (550)
+++++.. ...+...|+|+|+||+...
T Consensus 90 ~ni~~n~g~~aGq~v~HlHiHiiPR~~~ 117 (149)
T 3ksv_A 90 YNVLQNNGSLAHQEVPHVHFHIIPKTDE 117 (149)
T ss_dssp EEEEECCSTTTTCCSSSCCEEEEEECCT
T ss_pred EEEEEecCcccCCCCCEEEEEEEecccC
Confidence 4433332 1234478999999998664
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.44 E-value=6.3e-12 Score=124.57 Aligned_cols=201 Identities=12% Similarity=0.054 Sum_probs=122.2
Q ss_pred CEEEEEcCCCCCh------------HHHHHHHHHHhhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhcccCCCCccEEEE
Q 008885 4 PRILLCGDVLGRL------------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGRSEIPIPTYFI 70 (550)
Q Consensus 4 ~KILv~GDvhG~~------------~~l~~kv~~l~~k~GpfD~li~~GDff~~~~-~~~~~~~~~l~g~~~~p~ptyfv 70 (550)
|||++++|+|++. ..+-+.++.+++...+.|+||++||++.... ...+.+.+++ ..+++|+|+|
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l---~~l~~p~~~v 77 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQIL---GSLNYPLYLI 77 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHH---TTCSSCEEEE
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHH---HhcCCCEEEE
Confidence 7999999999985 3444445555544335899999999976432 2223445555 4567899999
Q ss_pred ecCCCChHHHHHHhhccccccCcccCCceecCcEEEcCC-CCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHh-
Q 008885 71 GDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKG-SGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRAL- 148 (550)
Q Consensus 71 ~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~-~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l- 148 (550)
.||||....+.+.+... +. . +..|. +. .-++..+|++|.+|...... .....+++++++.|.+.
T Consensus 78 ~GNHD~~~~~~~~~~~~-~~---~-----~~~~~---~~~~~~~~~~~~~~i~ld~~~~~--~~~~~~~~~~~~wl~~~l 143 (274)
T 3d03_A 78 PGNHDDKALFLEYLQPL-CP---Q-----LGSDA---NNMRCAVDDFATRLLFIDSSRAG--TSKGWLTDETISWLEAQL 143 (274)
T ss_dssp CCTTSCHHHHHHHHGGG-SG---G-----GCSCG---GGCCEEECSSSSEEEECCCCCTT--CSSBCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhhhh-hc---C-----cccCC---CceEEEEEeCCEEEEEEeCCCCC--CCCCeeCHHHHHHHHHHH
Confidence 99999755443333210 00 0 00000 00 11233568999988765432 12245677777666653
Q ss_pred hcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeEE
Q 008885 149 AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRF 227 (550)
Q Consensus 149 ~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~f~er~Py~~~~~~~~TRF 227 (550)
........|+++|.+|......... . ....+...+.+++++. +++++|+||.|..+... + ...+-+
T Consensus 144 ~~~~~~~~iv~~H~p~~~~~~~~~~-----~--~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~-~-----~g~~~~ 210 (274)
T 3d03_A 144 FEGGDKPATIFMHHPPLPLGNAQMD-----P--IACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ-Y-----RQALIS 210 (274)
T ss_dssp HHHTTSCEEEEESSCSSCCSCTTTG-----G--GSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE-E-----TTEEEE
T ss_pred HhCCCCCEEEEECCCCcccCCcccC-----c--ccCcCHHHHHHHHHhCCCceEEEeCCCCCchhhe-E-----CCEEEE
Confidence 2223457899999999865321100 0 0124678899999988 79999999998755431 1 224566
Q ss_pred EEcCCCC
Q 008885 228 LGLAPVG 234 (550)
Q Consensus 228 I~La~~g 234 (550)
++.|..+
T Consensus 211 ~~pg~~~ 217 (274)
T 3d03_A 211 TLPGTVH 217 (274)
T ss_dssp ECCCSSC
T ss_pred EcCCcce
Confidence 7777665
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.34 E-value=2.2e-11 Score=124.12 Aligned_cols=201 Identities=11% Similarity=0.019 Sum_probs=125.6
Q ss_pred CCEEEEEcCCCCC------------hHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhccc-CCCCccEE
Q 008885 3 PPRILLCGDVLGR------------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGR-SEIPIPTY 68 (550)
Q Consensus 3 ~~KILv~GDvhG~------------~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~-~~~~~~~~~l~g~-~~~p~pty 68 (550)
+|||++++|+|.. ...+-+.++.+++.....|+||++||++.... .....+.+++... ..+.+|+|
T Consensus 25 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~pv~ 104 (330)
T 3ib7_A 25 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELV 104 (330)
T ss_dssp SEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCCEE
Confidence 5899999999962 34444445555442336899999999986532 2223344444221 12468999
Q ss_pred EEecCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHh
Q 008885 69 FIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRAL 148 (550)
Q Consensus 69 fv~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l 148 (550)
+|.||||....+...+... . ...+ ...-++.++|++|.++.+... ......+.+++++-|.+.
T Consensus 105 ~v~GNHD~~~~~~~~~~~~---------~--~~~~----~~~~~~~~~~~~~i~lds~~~--~~~~~~~~~~q~~wl~~~ 167 (330)
T 3ib7_A 105 WVMGNHDDRAELRKFLLDE---------A--PSMA----PLDRVCMIDGLRIIVLDTSVP--GHHHGEIRASQLGWLAEE 167 (330)
T ss_dssp ECCCTTSCHHHHHHHHHCC---------C--CCCS----CCCEEEEETTEEEEECCCCCT--TCCSBCCCHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHhccc---------c--cccC----CcceEEEeCCEEEEEecCCCC--CCCCCccCHHHHHHHHHH
Confidence 9999999755444444310 0 0000 112345688999999887643 122345678888777764
Q ss_pred h-cCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEE
Q 008885 149 A-EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRF 227 (550)
Q Consensus 149 ~-~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRF 227 (550)
. .......|+++|.+|......... . ....+...+.+++...+++++|+||.|..+... ...+.+
T Consensus 168 l~~~~~~~~iv~~Hh~p~~~~~~~~~-----~--~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~-------~~g~~~ 233 (330)
T 3ib7_A 168 LATPAPDGTILALHHPPIPSVLDMAV-----T--VELRDQAALGRVLRGTDVRAILAGHLHYSTNAT-------FVGIPV 233 (330)
T ss_dssp TTSCCTTCEEEECSSCSSCCSSGGGG-----G--GSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE-------ETTEEE
T ss_pred HHhcccCCeEEEEECCCCCCCccccc-----c--ccccCHHHHHHHHhccCceEEEECCCCCcccce-------ECCEEE
Confidence 3 223344799999999875321110 0 023567889999999999999999998765421 234777
Q ss_pred EEcCCCC
Q 008885 228 LGLAPVG 234 (550)
Q Consensus 228 I~La~~g 234 (550)
++.+..+
T Consensus 234 ~~~gs~~ 240 (330)
T 3ib7_A 234 SVASATC 240 (330)
T ss_dssp EECCCSS
T ss_pred EecCcce
Confidence 8777765
|
| >1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=4.7e-12 Score=115.70 Aligned_cols=90 Identities=14% Similarity=0.220 Sum_probs=72.6
Q ss_pred CCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh----cCCceEEEe--ecC
Q 008885 400 VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGKEAVFFE--WLS 473 (550)
Q Consensus 400 ~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~----~~~~~v~~E--~~~ 473 (550)
++...||+.++.++++++..|..+||+||||.+|++++.+|+++++.+|....+.+.+.+.+ .|+++++.. ...
T Consensus 10 ip~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~ag 89 (147)
T 1fit_A 10 IKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAG 89 (147)
T ss_dssp ECGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSGGGT
T ss_pred cCCcEEEEECCCEEEEECCCCCCCcEEEEEEccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCCccC
Confidence 45567899999999999999999999999999999999999999999888877777666553 344444433 123
Q ss_pred CCcCeEEEEEeecCCC
Q 008885 474 KRGTHANLQAVPIPTS 489 (550)
Q Consensus 474 ~~~~H~hi~~vPvp~~ 489 (550)
+.+.|+|+|+||+...
T Consensus 90 q~v~HlH~HiiPr~~~ 105 (147)
T 1fit_A 90 QTVKHVHVHVLPRKAG 105 (147)
T ss_dssp CCSSSCCEEEEEECTT
T ss_pred CCccEEEEEEECCcCC
Confidence 4578999999998654
|
| >3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.6e-11 Score=110.86 Aligned_cols=89 Identities=11% Similarity=-0.050 Sum_probs=72.5
Q ss_pred CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCceEEEeecCCCcCeE
Q 008885 401 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK-NQGKEAVFFEWLSKRGTHA 479 (550)
Q Consensus 401 ~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~-~~~~~~v~~E~~~~~~~H~ 479 (550)
+..++|+.++.||+.|.+.|..|||+||+|.+|+.++.+++++++.++....+.+.+.++ ..+.+.+.+....+.++|+
T Consensus 11 ~d~~~v~~~~~~~v~l~~~p~~pGh~lV~~k~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~~aGq~V~Hl 90 (137)
T 3ohe_A 11 ADTHKLGESRLCDVLLMNDNTWPWVILVPRVSGIREIYELPNEQQQRLLFESSALSEGMMELFGGDKMNVAALGNMVPQL 90 (137)
T ss_dssp HHEEEEEECSSEEEEEESCTTSCEEEEEESCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSSCCSC
T ss_pred cccEEEEECCcEEEEEcCCCCCCEEEEEecccccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeeccCcCCEE
Confidence 345789999999999999999999999999999999999999988888877776666655 3455444444455668999
Q ss_pred EEEEeecCCC
Q 008885 480 NLQAVPIPTS 489 (550)
Q Consensus 480 hi~~vPvp~~ 489 (550)
|+|+||+...
T Consensus 91 H~HviPR~~~ 100 (137)
T 3ohe_A 91 HLHHIVRYQG 100 (137)
T ss_dssp CEEEEEECTT
T ss_pred EEEEeCCCCC
Confidence 9999997654
|
| >3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.8e-11 Score=112.04 Aligned_cols=89 Identities=10% Similarity=0.055 Sum_probs=73.1
Q ss_pred CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCceEEEeecCCCcCeE
Q 008885 401 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK-NQGKEAVFFEWLSKRGTHA 479 (550)
Q Consensus 401 ~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~-~~~~~~v~~E~~~~~~~H~ 479 (550)
+...+|+.++.||+.|++.|..|||+||+|.+|+.++.+|+++++.++....+.+.+.++ ..+.+.+.+....+.++|+
T Consensus 11 ~d~~~v~~~~~~~v~L~~~p~~pGh~LV~pk~Hv~~l~dL~~e~~~~l~~~~~~va~al~~~~~~~~~Ni~~aGq~V~Hl 90 (149)
T 3i24_A 11 QDCIVLGNLPLCKVLLIKEDIGPWLILVPRIEELKEIHHMTDEQQIQFIKESSAVAQLLEDNFSPDKINIGALGNLVPQL 90 (149)
T ss_dssp HHEEEEEECSSEEEEEECBSSTTEEEEEESCTTCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEECCSSCCSC
T ss_pred cCCEEEEECCCEEEEEcCCCCCCEEEEEeCccccCChhHCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEhhhhCCCCEE
Confidence 345789999999999999999999999999999999999999998888877776666655 3455555555455668999
Q ss_pred EEEEeecCCC
Q 008885 480 NLQAVPIPTS 489 (550)
Q Consensus 480 hi~~vPvp~~ 489 (550)
|+|+||+...
T Consensus 91 H~HvIPR~~~ 100 (149)
T 3i24_A 91 HIHHIARFTT 100 (149)
T ss_dssp CEEEEEECTT
T ss_pred EEEEeCCccC
Confidence 9999997653
|
| >1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1 | Back alignment and structure |
|---|
Probab=99.20 E-value=2e-11 Score=130.86 Aligned_cols=100 Identities=13% Similarity=0.152 Sum_probs=79.2
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cC---
Q 008885 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QG--- 463 (550)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~~--- 463 (550)
.+.|.||. ...+...||+.+++++++++..|..+||+||||.+|+.++.+|+++++.+|....+.+.+.+.+ .+
T Consensus 296 ~~~c~fc~--~e~p~~~iv~e~~~~~a~~~~~p~~pgh~lviPk~h~~~~~~l~~~~~~~l~~~~~~v~~~l~~~~~~~~ 373 (440)
T 1ems_A 296 TGGLKFAR--FNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTS 373 (440)
T ss_dssp SSCCEETT--EECCGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred cCceeeec--cccCCceEEEECCCEEEEEcCCcCCCCeEEEEEccccCChhHCCHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 55799998 2345567899999999999999999999999999999999999999999999888777776653 33
Q ss_pred CceEEEe--ecCCCcCeEEEEEeecCCC
Q 008885 464 KEAVFFE--WLSKRGTHANLQAVPIPTS 489 (550)
Q Consensus 464 ~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (550)
+++++.. ...+.+.|+|+|+||....
T Consensus 374 ~n~~~~~g~~~gq~v~HlH~Hiipr~~~ 401 (440)
T 1ems_A 374 TTICVQDGKDAGQTVPHVHIHILPRRAG 401 (440)
T ss_dssp EEEECCCSGGGTCCSSSCCEEEEEECSS
T ss_pred eEEEEecCCCCCCCccEEEEEEeCCCCC
Confidence 3333322 1234478999999997654
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.15 E-value=4.2e-10 Score=105.27 Aligned_cols=132 Identities=14% Similarity=-0.029 Sum_probs=90.9
Q ss_pred CCCCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHH
Q 008885 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKV 80 (550)
Q Consensus 1 M~~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~ 80 (550)
|.+|||+++||+||+.+.+.+.++.+.+ +.|+||++||+... .+..+ . .|+|+|.||||...
T Consensus 4 m~~m~i~~isD~H~~~~~~~~~~~~~~~---~~d~i~~~GD~~~~------~l~~l----~---~~~~~v~GNhD~~~-- 65 (176)
T 3ck2_A 4 MAKQTIIVMSDSHGDSLIVEEVRDRYVG---KVDAVFHNGDSELR------PDSPL----W---EGIRVVKGNMDFYA-- 65 (176)
T ss_dssp CCCEEEEEECCCTTCHHHHHHHHHHHTT---TSSEEEECSCCCSC------TTCGG----G---TTEEECCCTTCCST--
T ss_pred ccCcEEEEEecCCCCHHHHHHHHHHhhc---CCCEEEECCCCchH------HHHhh----h---CCeEEecCcccchh--
Confidence 7789999999999998876655655543 57999999998321 11111 1 28999999998421
Q ss_pred HHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEe
Q 008885 81 LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLT 160 (550)
Q Consensus 81 l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLT 160 (550)
.+.+. .++++ .+..|+++
T Consensus 66 ------------------~~p~~-------~~~~~-------------------------------------~~~~i~~~ 83 (176)
T 3ck2_A 66 ------------------GYPER-------LVTEL-------------------------------------GSTKIIQT 83 (176)
T ss_dssp ------------------TCCSE-------EEEEE-------------------------------------TTEEEEEE
T ss_pred ------------------cCCcE-------EEEEE-------------------------------------CCeEEEEE
Confidence 00100 01111 23578999
Q ss_pred CCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCC
Q 008885 161 NEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 161 h~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~ 235 (550)
|.+|.++ ..+...+.+++...++.+.++||.|..+.. ....+++||.|.++.
T Consensus 84 Hg~~~~~----------------~~~~~~l~~~~~~~~~d~vi~GHtH~~~~~-------~~~~~~~inpGs~~~ 135 (176)
T 3ck2_A 84 HGHLFDI----------------NFNFQKLDYWAQEEEAAICLYGHLHVPSAW-------LEGKILFLNPGSISQ 135 (176)
T ss_dssp CSGGGTT----------------TTCSHHHHHHHHHTTCSEEECCSSCCEEEE-------EETTEEEEEECCSSS
T ss_pred CCCccCC----------------CCCHHHHHHHHHhcCCCEEEECCcCCCCcE-------EECCEEEEECCCCCc
Confidence 9988653 135677888888899999999999875542 123589999998874
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.5e-09 Score=103.17 Aligned_cols=65 Identities=14% Similarity=0.150 Sum_probs=48.7
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChH
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAA 78 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~ 78 (550)
+|||++++|+||+...+-+.++.+++. ..|+||++||++.+ +..+++ .+++.|+|+|.||||...
T Consensus 25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~--~~D~ii~~GDl~~~------~~~~~l---~~l~~~~~~V~GNhD~~~ 89 (190)
T 1s3l_A 25 HMKIGIMSDTHDHLPNIRKAIEIFNDE--NVETVIHCGDFVSL------FVIKEF---ENLNANIIATYGNNDGER 89 (190)
T ss_dssp -CEEEEECCCTTCHHHHHHHHHHHHHS--CCSEEEECSCCCST------HHHHHG---GGCSSEEEEECCTTCCCH
T ss_pred CeEEEEEeeCCCCHHHHHHHHHHHhhc--CCCEEEECCCCCCH------HHHHHH---HhcCCCEEEEeCCCcchH
Confidence 389999999999988766666655432 47999999999753 234444 345689999999999753
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.08 E-value=8.6e-10 Score=108.55 Aligned_cols=188 Identities=11% Similarity=0.058 Sum_probs=101.6
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHh---hhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHH
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVN---KSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKV 80 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~---~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~ 80 (550)
|||+++||+||++..+.+.++.+. ......|+||++||++..... ..++.+++....+ ..++|+|.||||.. .
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~-~~~~~~~l~~l~~-~~~~~~v~GNhD~~--~ 77 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPY-PKEVIEVIKDLTK-KENVKIIRGKYDQI--I 77 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSC-HHHHHHHHHHHHH-HSCEEEECCHHHHH--H
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCC-HHHHHHHHHhhHh-hcCeeEEecchHHH--h
Confidence 799999999999988776666665 332147999999999754321 1223334321111 14799999999732 2
Q ss_pred HHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcC----CCCcc
Q 008885 81 LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEE----PGIVD 156 (550)
Q Consensus 81 l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~----~~~vD 156 (550)
..... . +.+ +.. ...+++.++. ..+. . .+...++++.++.|..+... ..+.+
T Consensus 78 ~~~~~-----------~---~~~--~~~-~~~~~~~~~~---~~~~-~---~~~~~l~~~~~~~L~~lp~~~~~~~~~~~ 133 (252)
T 1nnw_A 78 AMSDP-----------H---ATD--PGY-IDKLELPGHV---KKAL-K---FTWEKLGHEGREYLRDLPIYLVDKIGGNE 133 (252)
T ss_dssp HHSCT-----------T---CSS--SGG-GGGSSCCHHH---HHHH-H---HHHHHHHHHHHHHHHTSCSCEEEEETTEE
T ss_pred hcccc-----------c---cCC--ccc-ccchhhhHHH---HHHH-H---HHHHHCCHHHHHHHHhCCceEEEeeCCcE
Confidence 21110 0 000 000 0000000000 0000 0 00001223333444432110 02358
Q ss_pred EEEeCCCCc-cccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeEEEEcCCCC
Q 008885 157 LFLTNEWPS-GVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVG 234 (550)
Q Consensus 157 ILLTh~wP~-gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g 234 (550)
|+++|..|. ...... ........+.+++... ++++.|+||.|..+.. ....+.+||.|+++
T Consensus 134 i~~~H~~p~~~~~~~~----------~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~-------~~~~~~~in~Gs~~ 196 (252)
T 1nnw_A 134 VFGVYGSPINPFDGEV----------LAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDA-------MTRYGRVVCPGSVG 196 (252)
T ss_dssp EEEESSCSSCTTTCCC----------CSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEE-------EETTEEEEEECCSS
T ss_pred EEEEcCCCCCCccccc----------CCCCCHHHHHHHHhcCCCCCEEEECCccccceE-------ecCCeEEEECCCcc
Confidence 999999884 321110 0123557888888888 9999999999875543 12358999999998
Q ss_pred Cc
Q 008885 235 NK 236 (550)
Q Consensus 235 ~~ 236 (550)
.+
T Consensus 197 ~~ 198 (252)
T 1nnw_A 197 FP 198 (252)
T ss_dssp SC
T ss_pred CC
Confidence 53
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.02 E-value=1.4e-09 Score=105.28 Aligned_cols=144 Identities=13% Similarity=0.116 Sum_probs=88.0
Q ss_pred CEEEEEcCCCCChHH--HHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHH
Q 008885 4 PRILLCGDVLGRLNQ--LFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVL 81 (550)
Q Consensus 4 ~KILv~GDvhG~~~~--l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l 81 (550)
|||++++|+|++... +.+.+..+.+ ..+.|+||++||++. . +..++| .+++.|+|+|.||||...
T Consensus 26 m~i~~iSD~H~~~~~~~l~~~l~~~~~-~~~~D~vi~~GDl~~--~----~~l~~l---~~~~~~v~~V~GNHD~~~--- 92 (215)
T 2a22_A 26 DLVLLIGDLKIPYGAKELPSNFRELLA-TDKINYVLCTGNVCS--Q----EYVEML---KNITKNVYIVSGDLDSAI--- 92 (215)
T ss_dssp EEEEEECCCCTTTTCSSCCGGGHHHHH-CTTCCEEEECSCCCC--H----HHHHHH---HHHCSCEEECCCTTCCSC---
T ss_pred cEEEEEecCCCCCChHHHHHHHHHHHh-cCCCCEEEECCCCCC--H----HHHHHH---HHcCCCEEEecCCCcCcc---
Confidence 799999999997532 2233333322 235799999999985 1 233444 234468999999998521
Q ss_pred HHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeC
Q 008885 82 LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTN 161 (550)
Q Consensus 82 ~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh 161 (550)
. ...+. ++...... .+ + ...+..|+++|
T Consensus 93 ---------------~-~~~~~--~~~~lp~~-----~~---------------------------~--~~~~~~i~l~H 120 (215)
T 2a22_A 93 ---------------F-NPDPE--SNGVFPEY-----VV---------------------------V--QIGEFKIGLMH 120 (215)
T ss_dssp ---------------C-BCCGG--GTBCCCSE-----EE---------------------------E--EETTEEEEEEC
T ss_pred ---------------c-ccChh--hHhhCCce-----EE---------------------------E--ecCCeEEEEEc
Confidence 0 00000 00000000 00 0 01346789999
Q ss_pred CCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCC
Q 008885 162 EWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 162 ~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~ 235 (550)
..|... ..+...+.+++...++.|.++||.|..+.. ....+++||.|.++.
T Consensus 121 g~~~~~----------------~~~~~~l~~~~~~~~~d~vl~GHtH~~~~~-------~~~~~~~inpGS~~~ 171 (215)
T 2a22_A 121 GNQVLP----------------WDDPGSLEQWQRRLDCDILVTGHTHKLRVF-------EKNGKLFLNPGTATG 171 (215)
T ss_dssp STTSSS----------------TTCHHHHHHHHHHHTCSEEEECSSCCCEEE-------EETTEEEEECCCSSC
T ss_pred CCccCC----------------CCCHHHHHHHHhhcCCCEEEECCcCCCccE-------eeCCEEEEECCcccc
Confidence 777532 134567888888889999999999875432 234589999999864
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.7e-09 Score=102.57 Aligned_cols=135 Identities=13% Similarity=0.130 Sum_probs=86.6
Q ss_pred CEEEEEcCCCCChH--HHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHH
Q 008885 4 PRILLCGDVLGRLN--QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVL 81 (550)
Q Consensus 4 ~KILv~GDvhG~~~--~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l 81 (550)
|||++++|+|++.. .+.+++.++.++ ...|+||++||++. . +..+++ .+++.|+|+|.||||...
T Consensus 11 m~i~~iSD~H~~~~~~~~~~~l~~~~~~-~~~d~ii~~GDl~~--~----~~~~~l---~~~~~~~~~v~GNhD~~~--- 77 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRCNSLPAKFKKLLVP-GKIQHILCTGNLCT--K----ESYDYL---KTLAGDVHIVRGDFDENL--- 77 (192)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCT-TSCSEEEECSCCBS--H----HHHHHH---HHHCSEEEECCCTTCCCT---
T ss_pred eEEEEEecCCCCccchhHHHHHHHHhcc-CCCCEEEEcCCCCC--H----HHHHHH---HhcCCCEEEEcCCcCccc---
Confidence 89999999998642 233334433222 35899999999985 1 233343 233468999999998421
Q ss_pred HHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeC
Q 008885 82 LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTN 161 (550)
Q Consensus 82 ~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh 161 (550)
.+.. ..++++ .+..|+++|
T Consensus 78 -----------------~lp~-------~~~~~~-------------------------------------~~~~i~l~H 96 (192)
T 1z2w_A 78 -----------------NYPE-------QKVVTV-------------------------------------GQFKIGLIH 96 (192)
T ss_dssp -----------------TSCS-------EEEEEE-------------------------------------TTEEEEEEC
T ss_pred -----------------cCCc-------ceEEEE-------------------------------------CCEEEEEEC
Confidence 0000 001112 235678888
Q ss_pred CCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCC
Q 008885 162 EWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 162 ~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~ 235 (550)
..|.... .+...+.++++..++.|.++||.|..+.. ....+++||.|+++.
T Consensus 97 g~~~~~~----------------~~~~~l~~~~~~~~~d~vi~GHtH~~~~~-------~~~~~~~inpGS~~~ 147 (192)
T 1z2w_A 97 GHQVIPW----------------GDMASLALLQRQFDVDILISGHTHKFEAF-------EHENKFYINPGSATG 147 (192)
T ss_dssp SCCCCBT----------------TCHHHHHHHHHHHSSSEEECCSSCCCEEE-------EETTEEEEECCCTTC
T ss_pred CCcCCCC----------------CCHHHHHHHHHhcCCCEEEECCcCcCccE-------eECCEEEEECCcccc
Confidence 7775421 24556778888889999999999875542 234689999999864
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=98.96 E-value=2.7e-10 Score=112.42 Aligned_cols=178 Identities=13% Similarity=0.037 Sum_probs=102.6
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHH
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLL 82 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~ 82 (550)
.|||+++||+||++..+.+.++.+. +.|.+|++||++..... ..++.+++.. .+ .+++|.||||.. +..
T Consensus 3 ~mri~~isDiHg~~~~l~~~l~~~~----~~d~ii~~GDl~~~g~~-~~~~~~~l~~---~~-~~~~v~GNhD~~--~~~ 71 (246)
T 3rqz_A 3 AMRILIISDVHANLVALEAVLSDAG----RVDDIWSLGDIVGYGPR-PRECVELVRV---LA-PNISVIGNHDWA--CIG 71 (246)
T ss_dssp CCCEEEECCCTTCHHHHHHHHHHHC----SCSEEEECSCCSSSSSC-HHHHHHHHHH---HC-SSEECCCHHHHH--HTC
T ss_pred CcEEEEEeecCCCHHHHHHHHHhcc----CCCEEEECCCcCCCCCC-HHHHHHHHHh---cC-CCEEEeCchHHH--Hhc
Confidence 5899999999999988766565553 57999999999864332 2233444421 12 269999999631 111
Q ss_pred HhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCC-CCCCCCCCHHHHHHHHHhhcCCCCccEEEeC
Q 008885 83 AASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSE-GQQFGTYSQDDVDALRALAEEPGIVDLFLTN 161 (550)
Q Consensus 83 ~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~-~~~~~~~te~di~~L~~l~~~~~~vDILLTh 161 (550)
.. .. .. .. +..... ..+...++++.++.|..+......-+|+++|
T Consensus 72 ~~-----------~~----~~-----------~~--------~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~i~~~H 117 (246)
T 3rqz_A 72 RL-----------SL----DE-----------FN--------PVARFASYWTTMQLQAEHLQYLESLPNRMIDGDWTVVH 117 (246)
T ss_dssp CC-----------CC----C-------------C--------GGGGCHHHHHHHHCCHHHHHHHHHCCSEEEETTEEEES
T ss_pred cC-----------Cc----cc-----------cC--------HHHHHHHHHHHHHcCHHHHHHHHhCCcEEEECCEEEEE
Confidence 00 00 00 00 000000 0001134556666666643211223899999
Q ss_pred CCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccc----------cccCCC----CcceeEE
Q 008885 162 EWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYARE----------PYSNVD----AVHVTRF 227 (550)
Q Consensus 162 ~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~----------Py~~~~----~~~~TRF 227 (550)
..|...... .......+.++++..++++.|+||.|.-+.+. +..... -...+++
T Consensus 118 g~p~~~~~~------------~~~~~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~i 185 (246)
T 3rqz_A 118 GSPRHPIWE------------YIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDVSSGRYI 185 (246)
T ss_dssp SCSSSTTTC------------CCCSHHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEECSSSCEE
T ss_pred CCcCCcccc------------ccCChHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeecCCCeEE
Confidence 988764210 11234677888888999999999999754432 000000 0113899
Q ss_pred EEcCCCCCcc
Q 008885 228 LGLAPVGNKE 237 (550)
Q Consensus 228 I~La~~g~~~ 237 (550)
||.|++|.+.
T Consensus 186 vNpGSVG~Pr 195 (246)
T 3rqz_A 186 INPGAVGQPR 195 (246)
T ss_dssp EEECCSSCCC
T ss_pred EECCccCCCC
Confidence 9999998753
|
| >3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.94 E-value=3.6e-09 Score=95.20 Aligned_cols=88 Identities=10% Similarity=0.055 Sum_probs=68.3
Q ss_pred CcceEEEECCEEEEEecCCCCCCCeEEEEec-cccCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCceEEEeecCCCcCe
Q 008885 401 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPV-EHVPNTISTSPECEKELGRFQNSLMMYYK-NQGKEAVFFEWLSKRGTH 478 (550)
Q Consensus 401 ~~hliis~g~~~yl~l~kgpl~~gH~lIiP~-~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~-~~~~~~v~~E~~~~~~~H 478 (550)
+...+|+.++.|++.|.+.|..|| .||||. +|+.++.+|+++++.++....+.+.+.++ ..+.+-+.+....+.++|
T Consensus 13 ~~~~~v~~~~~~~v~l~~~~~~p~-~lvVpkr~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~~aGq~V~H 91 (135)
T 3nrd_A 13 RDGIPIGTLGLCQMRLMNDRRWPW-LILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIGALGNIVRQ 91 (135)
T ss_dssp HHEEEEEECSSEEEEEESCTTSCE-EEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECCSSCCS
T ss_pred cCCEEEEECCcEEEEEcCCCCCCE-EEEEcCccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccCCCCE
Confidence 345789999999999999999995 577777 89999999999988888877776666655 345444444445566899
Q ss_pred EEEEEeecCCC
Q 008885 479 ANLQAVPIPTS 489 (550)
Q Consensus 479 ~hi~~vPvp~~ 489 (550)
+|+|+||+...
T Consensus 92 lH~HviPR~~~ 102 (135)
T 3nrd_A 92 LHVHVIARREG 102 (135)
T ss_dssp CCEEEEEECTT
T ss_pred EEEEEecCCCC
Confidence 99999997543
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=98.92 E-value=1.3e-08 Score=102.49 Aligned_cols=206 Identities=13% Similarity=0.024 Sum_probs=112.5
Q ss_pred CCEEEEEcCCCCCh-------------------HHHHHHHHHHhhhcCCCcEEEEecCCCCCCh-------hhHHHHHHH
Q 008885 3 PPRILLCGDVLGRL-------------------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-------ELLDEFMNY 56 (550)
Q Consensus 3 ~~KILv~GDvhG~~-------------------~~l~~kv~~l~~k~GpfD~li~~GDff~~~~-------~~~~~~~~~ 56 (550)
.|||++++|+|... ..+-+.++.+++ .+.|+||++||++.... ...+.+.+.
T Consensus 5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRR--ERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHH--TTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHh--cCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 58999999999865 334444455544 35799999999976532 111223344
Q ss_pred hcccCCCCccEEEEecCCCCh----HHHHHHhhccccccCcccCCceecCcEEEcCC-CCeEEE-cCeEEEEEeCccCC-
Q 008885 57 VEGRSEIPIPTYFIGDYGVGA----AKVLLAASKNSANQGFKMDGFKVTDNLFWLKG-SGNFTL-HGLSVAYLSGRQSS- 129 (550)
Q Consensus 57 l~g~~~~p~ptyfv~GNhe~~----~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~-~gv~~i-~GlrIa~lgG~~~~- 129 (550)
+ ..+++|+|+|+||||.. ..+.+.+..... ......+..+.. .+. .-.+.. +|++|.+|.+....
T Consensus 83 l---~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~y~~~~~~~~~~i~ld~~~~~~ 154 (322)
T 2nxf_A 83 L---DACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQ-RTGTDTGSDLIG----DDIYAYEFSPAPNFRFVLLDAYDLSV 154 (322)
T ss_dssp H---HTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC-------CEECGG----GTCCCEEEEEETTEEEEECCTTSBCS
T ss_pred H---HhcCCcEEEecCCCCcccCCHHHHhhhhCCccc-ccccccccccCC----CCceEEEEecCCCEEEEEEcCceecc
Confidence 4 44678999999999741 111111110000 000000000110 111 112344 78888888764310
Q ss_pred ---------------------CC------------------CCCCCCCHHHHHHHHHh-hcCC--CCccEEEeCCCCccc
Q 008885 130 ---------------------EG------------------QQFGTYSQDDVDALRAL-AEEP--GIVDLFLTNEWPSGV 167 (550)
Q Consensus 130 ---------------------~~------------------~~~~~~te~di~~L~~l-~~~~--~~vDILLTh~wP~gi 167 (550)
+. .....+.+++++-|++. .... ...-|+++|.+|...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~~~~~iv~~H~p~~~~ 234 (322)
T 2nxf_A 155 IGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPC 234 (322)
T ss_dssp SSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHTCEEEEEESSCCCTT
T ss_pred cccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhcCCcEEEEEccCCCCC
Confidence 00 00123456666655542 1111 234599999999765
Q ss_pred cccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeEEEEcCCC
Q 008885 168 TNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPV 233 (550)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~ 233 (550)
.. + +. ....+...+.+++.+. +.+++|+||.|....... ...+++|+.+..
T Consensus 235 ~~--~----~~---~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~------~~g~~~i~~~~~ 286 (322)
T 2nxf_A 235 AA--D----PI---CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD------SSGAQHITLEGV 286 (322)
T ss_dssp SS--C----GG---GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC------TTSCEEEECCCG
T ss_pred CC--C----cc---ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec------cCCceEEEecch
Confidence 32 1 00 0124678888888887 678899999887554321 234778877665
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=5.6e-09 Score=104.69 Aligned_cols=184 Identities=11% Similarity=0.104 Sum_probs=107.6
Q ss_pred CCCCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHH
Q 008885 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKV 80 (550)
Q Consensus 1 M~~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~ 80 (550)
|...||++++|+||++..+-+.++.+.+. +.|.|||+||++..... ..++.+++. +. .|+++|.||||. .+
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~--~~D~ii~~GDlv~~g~~-~~~~~~~l~---~~-~~~~~v~GNhD~--~~ 79 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQL--GVDEYWLLGDILMPGTG-RRRILDLLD---QL-PITARVLGNWED--SL 79 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHT--TCCEEEECSCCSSSSSC-SHHHHHHHH---TS-CEEEECCCHHHH--HH
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhc--CCCEEEEcCCCCCCCCC-HHHHHHHHH---cc-CCEEEEcCChHH--HH
Confidence 44679999999999998877777766543 47999999999764332 234556653 22 278999999963 33
Q ss_pred HHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhc----CCCCcc
Q 008885 81 LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAE----EPGIVD 156 (550)
Q Consensus 81 l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~----~~~~vD 156 (550)
+..... ... +.......+. -... -+...++++.++.|..+-. ...+..
T Consensus 80 ~~~~~~----------~~~-------~~~~~~~~~~--------~~~~---~~~~~L~~~~~~~L~~LP~~~~~~~~g~~ 131 (270)
T 3qfm_A 80 WHGVRK----------ELD-------STRPSQRYLL--------RQCQ---YVLEEISLEEIEVLHNQPLQIHRQFGDLT 131 (270)
T ss_dssp HHHHTT----------CSC-------TTSHHHHHHH--------HHHH---HHHTTSCHHHHHHHHSCCSEEEEEETTEE
T ss_pred HHhhcc----------ccC-------CCcHHHHHHH--------HHHH---HHHHHcCHHHHHHHHhCCCceEEEECCcE
Confidence 332210 000 0000000000 0000 0012345666666665421 114568
Q ss_pred EEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCCc
Q 008885 157 LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNK 236 (550)
Q Consensus 157 ILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~~ 236 (550)
|+++|..|.......- . .......+.+++......+.|+||.|.-+.+. ....+.+||.|++|.+
T Consensus 132 i~lvHg~p~~~~~~~~---~------~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~------~~~~~~~iNpGSvg~p 196 (270)
T 3qfm_A 132 VGISHHLPDKNWGREL---I------HTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY------GTGGQLIVNPGSIGQP 196 (270)
T ss_dssp EEEESSBTTBSSSSTT---S------TTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE------CTTSCEEEEECCSSSC
T ss_pred EEEEECCCCCCCCcee---c------CCCcHHHHHHHhcccCCCEEEECCcCchHhee------ccCCEEEEECCCccCC
Confidence 9999988875421100 0 11234557777777889999999998644421 1235889999999975
|
| >1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=1.4e-09 Score=113.04 Aligned_cols=98 Identities=16% Similarity=0.229 Sum_probs=76.0
Q ss_pred CCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHh-h---cCC
Q 008885 389 KECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK-N---QGK 464 (550)
Q Consensus 389 ~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~-~---~~~ 464 (550)
.+|.||.+-.. .+||+.++++++++|..|..|||+||||.+|+.++.+|+++++.+|....+.+.+.+. . .++
T Consensus 214 ~~ciFc~ii~~---E~iV~E~e~~~af~~~~p~~P~h~lViPk~Hv~~l~dl~~~e~~~La~~l~~v~~~l~~~~~~~~y 290 (351)
T 1z84_A 214 GKCCLCEAKSK---HFVIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPY 290 (351)
T ss_dssp SSCTTTTHHHH---SEEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTSCCE
T ss_pred CCCHHHHHHhc---CeEEecCCcEEEEeccCCCCCeEEEEEeccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 47999986421 1289999999999999999999999999999999999999999999988876655443 2 345
Q ss_pred ceEEEe-ecC-----CCcCeEEEEEeecCCC
Q 008885 465 EAVFFE-WLS-----KRGTHANLQAVPIPTS 489 (550)
Q Consensus 465 ~~v~~E-~~~-----~~~~H~hi~~vPvp~~ 489 (550)
++++.. -.. +...|+|+|++|+-+.
T Consensus 291 n~~~n~gp~~g~~~~q~v~HlHiHiiPR~~~ 321 (351)
T 1z84_A 291 NYMIHTSPLKVTESQLPYTHWFLQIVPQLSG 321 (351)
T ss_dssp EEEEECCCTTCCGGGGGGCCCEEEEEECCCC
T ss_pred EEEEeCCCccCCCCCCccceEEEEEEccCCC
Confidence 554444 112 2357999999996544
|
| >1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=8.4e-10 Score=114.74 Aligned_cols=97 Identities=13% Similarity=0.087 Sum_probs=74.4
Q ss_pred CCCcccCCCC-CC-CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh-c---
Q 008885 389 KECWFCLSSP-SV-ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-Q--- 462 (550)
Q Consensus 389 ~~C~FC~~~~-~~-~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~--- 462 (550)
++|.||.+-. +. ....||+.++++++++|..|..+||+||||.+|+.++.+|+++++.+|....+.+.+.+.. .
T Consensus 194 ~~Cifc~ii~~E~~~~~~iV~E~e~~~af~~~~p~~pgh~lViPK~Hv~~l~dL~~~e~~~La~~l~~v~~~l~~~~~~~ 273 (348)
T 1gup_A 194 KSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCS 273 (348)
T ss_dssp SSCHHHHHHHHHHHHCTTEEEECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCCchhHHHhhccccCceEEEeCCcEEEEEccCCCCceEEEEEeCcccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5799997632 11 1236889999999999999999999999999999999999999999998776666655442 2
Q ss_pred -CCceEEEee-cC---CCcCeEEEEEee
Q 008885 463 -GKEAVFFEW-LS---KRGTHANLQAVP 485 (550)
Q Consensus 463 -~~~~v~~E~-~~---~~~~H~hi~~vP 485 (550)
++++++.-. .+ +...|+|+|+||
T Consensus 274 ~~Yn~g~~~~p~~g~~q~v~HlHiHiiP 301 (348)
T 1gup_A 274 FPYSMGWHGAPFNGEENQHWQLHAHFYP 301 (348)
T ss_dssp CCEEEEEECCCSSSSCCTTCCCEEEEEC
T ss_pred CCeEEEEEeCCCCCCCCcccEEEEEEec
Confidence 444444431 12 235799999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=98.85 E-value=5.3e-09 Score=107.76 Aligned_cols=219 Identities=11% Similarity=0.082 Sum_probs=104.1
Q ss_pred CCCEEEEEcCCC-C----Ch----------HHHHHHHHHHhhhcCCCcEEEEecC-CCCCC---hhhHHHHHHHhcccCC
Q 008885 2 SPPRILLCGDVL-G----RL----------NQLFKRVQSVNKSAGPFDAVLCVGQ-FFPDS---SELLDEFMNYVEGRSE 62 (550)
Q Consensus 2 ~~~KILv~GDvh-G----~~----------~~l~~kv~~l~~k~GpfD~li~~GD-ff~~~---~~~~~~~~~~l~g~~~ 62 (550)
..||||.++|+| | +. ...++++-....+. ..|+||++|| +|... ......+.+++.....
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~-~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~ 95 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKR-EVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMR 95 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHH-TCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHh-CCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHh
Confidence 468999999999 8 32 23344433332233 4799999999 87532 1222334555533222
Q ss_pred CCccEEEEecCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeE---EE--cCeEEEEEeCccCCCCCC-CCC
Q 008885 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF---TL--HGLSVAYLSGRQSSEGQQ-FGT 136 (550)
Q Consensus 63 ~p~ptyfv~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~---~i--~GlrIa~lgG~~~~~~~~-~~~ 136 (550)
. +|+|+|+||||... +.....- . ....+|++++++.... .+ +++.|.+++......... ...
T Consensus 96 ~-~pv~~i~GNHD~~~--~~~~~~~-------l--~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~ 163 (336)
T 2q8u_A 96 T-APVVVLPGNHDWKG--LKLFGNF-------V--TSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEG 163 (336)
T ss_dssp H-SCEEECCC--------CHHHHHH-------H--HHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC-------CCSS
T ss_pred c-CCEEEECCCCCccc--cccHHHH-------H--HhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHhhH
Confidence 2 79999999998643 2211100 0 0011568888764432 12 356777775432110000 000
Q ss_pred CCHHHHHHH-HHhhc---CCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccc
Q 008885 137 YSQDDVDAL-RALAE---EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYA 212 (550)
Q Consensus 137 ~te~di~~L-~~l~~---~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~e 212 (550)
..++.++.+ ..+.. ......||++|.++.+.... +.. .......+...+....+.|+++||.|....
T Consensus 164 ~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~-~~~--------~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~ 234 (336)
T 2q8u_A 164 DFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY-AGI--------EQGREIIINRALIPSVVDYAALGHIHSFRE 234 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC-----------------CCCEECGGGSCTTSSEEEEESCSSCEE
T ss_pred HHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCC-CCc--------cchhhcccCHHHccccCCEEEEccccCceE
Confidence 011223322 22221 24568899999999876321 100 000000111112234679999999987655
Q ss_pred cccccCCCCcceeEEEEcCCCCC----c-ccceeEEEeccCCC
Q 008885 213 REPYSNVDAVHVTRFLGLAPVGN----K-EKQKFIHALSPTPA 250 (550)
Q Consensus 213 r~Py~~~~~~~~TRFI~La~~g~----~-~K~Kw~yAf~i~p~ 250 (550)
.. ..+++++.|.... . ...|-+.-+.+++.
T Consensus 235 ~~--------~~~~i~y~GS~~~~s~~e~~~~~~~~lv~i~~~ 269 (336)
T 2q8u_A 235 IQ--------KQPLTIYPGSLIRIDFGEEADEKGAVFVELKRG 269 (336)
T ss_dssp EE--------ETTEEEECCCSSCCSGGGTTCCCEEEEEEEETT
T ss_pred eC--------CCccEEECCCCcCCCccccCCCCEEEEEEEeCC
Confidence 31 1246677775421 1 11355555666543
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=1.1e-08 Score=102.56 Aligned_cols=205 Identities=11% Similarity=0.020 Sum_probs=110.1
Q ss_pred CCEEEEEcCCCCCh---------HHHHHHHHHHhhhcCCCcEEEEecCCCCC---ChhhHHHHHHHhccc---CCC-Ccc
Q 008885 3 PPRILLCGDVLGRL---------NQLFKRVQSVNKSAGPFDAVLCVGQFFPD---SSELLDEFMNYVEGR---SEI-PIP 66 (550)
Q Consensus 3 ~~KILv~GDvhG~~---------~~l~~kv~~l~~k~GpfD~li~~GDff~~---~~~~~~~~~~~l~g~---~~~-p~p 66 (550)
.+||+++||+|... ..+.+.+..+.++. +.|+||++||++.. ......++.+.+... ..+ ++|
T Consensus 6 ~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~-~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p 84 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTL-GADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVP 84 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHH-CCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCC
T ss_pred ceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhc-CCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCC
Confidence 58999999999863 24555555533333 47999999998532 111111344433221 124 789
Q ss_pred EEEEecCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEE------cCeEEEEEeCccCCC----------
Q 008885 67 TYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL------HGLSVAYLSGRQSSE---------- 130 (550)
Q Consensus 67 tyfv~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i------~GlrIa~lgG~~~~~---------- 130 (550)
+|+|+||||........+.-.. ....+..++.+| .+.+ ++++|.+|.......
T Consensus 85 ~~~v~GNHD~~~~~~~~~~~~~------~~~~~~~~~~~y-----~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~ 153 (313)
T 1ute_A 85 WHVLAGNHDHLGNVSAQIAYSK------ISKRWNFPSPYY-----RLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQP 153 (313)
T ss_dssp EEECCCHHHHHSCHHHHHHGGG------TSTTEECCSSSE-----EEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSC
T ss_pred EEEECCCCccCCCccccccccc------cCCCccCcccce-----EEEEecCCCCceEEEEEEEChHHhCcCcccccccc
Confidence 9999999975322222211000 001111122111 1122 367787776542100
Q ss_pred -CCCCCCCCHHHHHHHHH-hhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC
Q 008885 131 -GQQFGTYSQDDVDALRA-LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG 208 (550)
Q Consensus 131 -~~~~~~~te~di~~L~~-l~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~ 208 (550)
......+.+++++-|.+ +.......-|+++|.+|........ .......+.+++.+.+..++|+||.|
T Consensus 154 ~~~~~~~~~~~q~~wL~~~L~~~~~~~~iv~~H~p~~~~~~~~~----------~~~~~~~l~~~l~~~~v~~~l~GH~H 223 (313)
T 1ute_A 154 ERPRNLALARTQLAWIKKQLAAAKEDYVLVAGHYPVWSIAEHGP----------THCLVKQLLPLLTTHKVTAYLCGHDH 223 (313)
T ss_dssp CSCSCHHHHHHHHHHHHHHHHHCCCSEEEEECSSCSSCCSSSCC----------CHHHHHHTHHHHHHTTCSEEEECSSS
T ss_pred CCccccchHHHHHHHHHHHHHhCCCCeEEEEECCCCccCCCCCC----------cHHHHHHHHHHHHHcCCcEEEECChh
Confidence 00011223445555554 3333346789999999987532111 00112456777888899999999998
Q ss_pred CccccccccCCCCcceeEEEEcCCCCC
Q 008885 209 VFYAREPYSNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 209 ~f~er~Py~~~~~~~~TRFI~La~~g~ 235 (550)
.+.-..+ ...+.+|+.|..+.
T Consensus 224 ~~~~~~~------~~g~~~i~~gs~~~ 244 (313)
T 1ute_A 224 NLQYLQD------ENGLGFVLSGAGNF 244 (313)
T ss_dssp SEEEEEC------TTCCEEEEECBSSC
T ss_pred hhhhccC------CCCceEEEECCCcC
Confidence 5322111 23578898887764
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.80 E-value=3.6e-09 Score=99.55 Aligned_cols=62 Identities=18% Similarity=0.195 Sum_probs=43.1
Q ss_pred CEEEEEcCCCC--ChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 4 PRILLCGDVLG--RLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 4 ~KILv~GDvhG--~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
|||++++|+|| +...+.+.++.+. .+.|+||++||++.. ++.+++. +...|+|+|.||||..
T Consensus 23 mri~~iSD~Hg~~~~~~l~~~l~~~~---~~~D~ii~~GD~~~~------~~~~~l~---~~~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 23 KRFLLISDSHVPVRMASLPDEILNSL---KEYDGVIGLGDYVDL------DTVILLE---KFSKEFYGVHGNMDYP 86 (178)
T ss_dssp EEEEEECCCCBTTTTCCCCHHHHHGG---GGCSEEEESSCBSCH------HHHHHHH---HHTSSEEECCCSSSCG
T ss_pred eEEEEEecccCCCCHHHHHHHHHHHh---cCCCEEEECCCCCCH------HHHHHHH---hcCCCEEEEECCCCcH
Confidence 79999999997 5544444444443 247999999999752 2334442 2336899999999853
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.9e-07 Score=99.43 Aligned_cols=211 Identities=9% Similarity=0.024 Sum_probs=113.2
Q ss_pred CCEEEEEcCCCCCh-------------------------HHHHHH-HHHHhhhcCCCcEEEEecCCCCCCh-hhHHHHHH
Q 008885 3 PPRILLCGDVLGRL-------------------------NQLFKR-VQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMN 55 (550)
Q Consensus 3 ~~KILv~GDvhG~~-------------------------~~l~~k-v~~l~~k~GpfD~li~~GDff~~~~-~~~~~~~~ 55 (550)
.|||++++|+|... ...+++ ++.+++ . +.|+||++||++.... ...+.+.+
T Consensus 39 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-~~d~vi~~GDl~~~~~~~~~~~~~~ 116 (443)
T 2xmo_A 39 NLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVES-K-KTDVLIISGDLTNNGEKTSHEELAK 116 (443)
T ss_dssp CEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHH-H-TCSEEEEESCCBSSCCHHHHHHHHH
T ss_pred CeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHH-c-CCCEEEECCCCCCCCCHHHHHHHHH
Confidence 47999999999742 122222 233322 3 3699999999975432 11223334
Q ss_pred HhcccCCCCccEEEEecCCCChHHH-------------------HHHhhccccccCcccCCceecCcEEEcCCCCeE---
Q 008885 56 YVEGRSEIPIPTYFIGDYGVGAAKV-------------------LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF--- 113 (550)
Q Consensus 56 ~l~g~~~~p~ptyfv~GNhe~~~~~-------------------l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~--- 113 (550)
++......++|+|+|+||||..... +...-. ..+ ....+.--....-+
T Consensus 117 ~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~~~~y~~~ 186 (443)
T 2xmo_A 117 KLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYS--------DFG--YEDAISSDEFSLSYLAA 186 (443)
T ss_dssp HHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTC--------CCC--CTTCSEECSSSSCEEEC
T ss_pred HHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhh--------hcC--hhhhhccCCCCceEEEe
Confidence 4432233478999999999863210 000000 000 00000000001112
Q ss_pred EEcCeEEEEEeCccCC------CCCCCCCCCHHHHHHHHHhh---cCCCCccEEEeCCCCccccccccccccccccCCCC
Q 008885 114 TLHGLSVAYLSGRQSS------EGQQFGTYSQDDVDALRALA---EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSS 184 (550)
Q Consensus 114 ~i~GlrIa~lgG~~~~------~~~~~~~~te~di~~L~~l~---~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~ 184 (550)
..+|++|++|+..... +......+++++++-|.+.. ......-|+++|.+|....+... .. ...
T Consensus 187 ~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~~~~Iv~~H~p~~~~~~~~~-----~~--~~~ 259 (443)
T 2xmo_A 187 PSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQ-----KG--YTI 259 (443)
T ss_dssp SBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTTCEEEEECSSBSSCSSCC-------CC--SBC
T ss_pred cCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcCCeEEEEECCCCcccccccc-----cc--ccc
Confidence 2468999998875421 11223456777776666532 11133459999999987642111 00 012
Q ss_pred CCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCC
Q 008885 185 NTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVG 234 (550)
Q Consensus 185 ~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g 234 (550)
.+...+.+++++.+++++|+||.|....+. +... .......|+-|.+.
T Consensus 260 ~~~~~l~~ll~~~~v~lvl~GH~H~~~~~~-~~~~-~g~~~~~i~~gs~~ 307 (443)
T 2xmo_A 260 NYNQQVIDALTEGAMDFSLSGHIHTQNIRS-AKST-DGKEITDIVTNALS 307 (443)
T ss_dssp TTHHHHHHHHHHTTCCEEEECSSCSCEEEE-EECT-TSCEEEEEECCCTT
T ss_pred ccHHHHHHHHHHcCCeEEEECCcccCchhh-cccC-CCCceEEEEcCccc
Confidence 467889999999999999999988754432 1111 12234555555554
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=98.79 E-value=2.3e-08 Score=94.86 Aligned_cols=140 Identities=10% Similarity=0.025 Sum_probs=82.1
Q ss_pred CCEEEEEcCCCCChHH------------HHHHH-HHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEE
Q 008885 3 PPRILLCGDVLGRLNQ------------LFKRV-QSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYF 69 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~------------l~~kv-~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyf 69 (550)
.|||++++|+|+.... +.+++ +.+++...+.|+||++||++... .....+.+++ ..++.|+++
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~-~~~~~~~~~l---~~l~~~~~~ 76 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF-NDKNEYLRIW---KALPGRKIL 76 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS-CCTTSHHHHH---HHSSSEEEE
T ss_pred CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc-hhHHHHHHHH---HHCCCCEEE
Confidence 4799999999964322 22222 23333224689999999996542 1122344555 334568999
Q ss_pred EecCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhh
Q 008885 70 IGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALA 149 (550)
Q Consensus 70 v~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~ 149 (550)
|.||||.... .+. .. + . .+..... |..
T Consensus 77 v~GNhD~~~~---~~~----------~~-~--~-----------~l~~~~~------------------------l~~-- 103 (195)
T 1xm7_A 77 VMGNHDKDKE---SLK----------EY-F--D-----------EIYDFYK------------------------IIE-- 103 (195)
T ss_dssp ECCTTCCCHH---HHT----------TT-C--S-----------EEESSEE------------------------EEE--
T ss_pred EeCCCCCchh---hhh----------hh-h--h-----------chhHHHH------------------------HHh--
Confidence 9999986421 111 00 0 0 0000000 000
Q ss_pred cCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccc
Q 008885 150 EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYA 212 (550)
Q Consensus 150 ~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~e 212 (550)
..+..|++||.+|....... ...+.+.+.+++....+++.++||.|..+.
T Consensus 104 --~~~~~i~~~H~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 104 --HKGKRILLSHYPAKDPITER-----------YPDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp --ETTEEEEEESSCSSCSSCCS-----------CHHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred --cCCcEEEEEccCCcCCCccc-----------ccchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 02468999999987653210 013467888888888999999999887554
|
| >3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum} | Back alignment and structure |
|---|
Probab=98.78 E-value=2.6e-08 Score=91.00 Aligned_cols=89 Identities=10% Similarity=0.010 Sum_probs=69.2
Q ss_pred CCcceEEEECCEEEEEecCCCCCCCeEEEEecc-ccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCceEEEeecCCCcC
Q 008885 400 VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVE-HVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGT 477 (550)
Q Consensus 400 ~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~-H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~~~~~v~~E~~~~~~~ 477 (550)
.+...++.....|+|.+.+.+ +.+|+||||.+ |+.++.+|+++++.+|....+.+.+.+++ .+.+.+.+....+.++
T Consensus 15 ~~d~~~~~e~p~~~v~l~~~~-~~~H~LVIPk~~H~~~l~dL~~e~~~~l~~~~~~va~~l~~~~~~~g~N~~~aGq~V~ 93 (149)
T 3i4s_A 15 KEDTIDIGDLPLSKVLVIKDA-NYPWLLLVPRRPDAVEIIDLDEVQQAQLMTEISRVSRALKEITKCDKLNIAALGNLVP 93 (149)
T ss_dssp HHHEEEEEECSSEEEEEESCT-TSCEEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECCSSCC
T ss_pred hhCCEEEEEcCceEEEECCCC-CCCEEEEEecccccCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeecCCcCC
Confidence 344578889999999998654 56799999999 99999999999999988877777776553 3444444444556689
Q ss_pred eEEEEEeecCCC
Q 008885 478 HANLQAVPIPTS 489 (550)
Q Consensus 478 H~hi~~vPvp~~ 489 (550)
|+|+|+||+...
T Consensus 94 HlH~HvIPR~~~ 105 (149)
T 3i4s_A 94 QLHVHIIARRTG 105 (149)
T ss_dssp SCCEEEEEECTT
T ss_pred EEEEEEECCcCC
Confidence 999999997653
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=2.1e-08 Score=105.54 Aligned_cols=204 Identities=13% Similarity=0.033 Sum_probs=106.1
Q ss_pred CCCEEEEEcCCCCChH------------HHHHHHHHHhhhcCCCcEEEEecCCCCCCh---hhHHHHHHHhcccCCCCcc
Q 008885 2 SPPRILLCGDVLGRLN------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSS---ELLDEFMNYVEGRSEIPIP 66 (550)
Q Consensus 2 ~~~KILv~GDvhG~~~------------~l~~kv~~l~~k~GpfD~li~~GDff~~~~---~~~~~~~~~l~g~~~~p~p 66 (550)
..|||++++|+|.... ..++++-....+. ..|+||++||+|.... .....+.+++......++|
T Consensus 19 ~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~-~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~p 97 (386)
T 3av0_A 19 SHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEI-KPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIK 97 (386)
T ss_dssp CCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTT-CCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHc-CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence 3699999999997621 1222222222223 4799999999986432 2223344444322334789
Q ss_pred EEEEecCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEE--cCeEEEEEeCccCCCCCCCCCCCHHH-HH
Q 008885 67 TYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL--HGLSVAYLSGRQSSEGQQFGTYSQDD-VD 143 (550)
Q Consensus 67 tyfv~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i--~GlrIa~lgG~~~~~~~~~~~~te~d-i~ 143 (550)
+|+|.||||.....-.... . ..+..++.+|+...++.. .++.|.+++.... ...++ .+
T Consensus 98 v~~v~GNHD~~~~~~~~~~---------~--~~l~~~v~~l~~~~v~~~~~~~v~i~gl~~~~~--------~~~~~~~~ 158 (386)
T 3av0_A 98 VYIVAGNHEMPRRLGEESP---------L--ALLKDYVKILDGKDVINVNGEEIFICGTYYHKK--------SKREEMLD 158 (386)
T ss_dssp EEECCCGGGSCSSTTSCCG---------G--GGGTTTCEECSEEEEEEETTEEEEEEEECCCCS--------TTHHHHHH
T ss_pred EEEEcCCCCCCccccccCH---------H--HHHHHHeEEcCCCcEEEeCCCCEEEEeCCCCCH--------HHHHHHHH
Confidence 9999999985421100000 0 001122455553333222 4567777665321 11222 22
Q ss_pred HHHHhhc--CCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCC
Q 008885 144 ALRALAE--EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDA 221 (550)
Q Consensus 144 ~L~~l~~--~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~ 221 (550)
.|..+.. ......|||+|.++.++... . .... +..+ -++.|+++||.|... ..++
T Consensus 159 ~l~~l~~~~~~~~~~Ill~H~~~~~~~~~-~----------~~~~---~~~l---~~~d~v~~GH~H~~~-~~~~----- 215 (386)
T 3av0_A 159 KLKNFESEAKNYKKKILMLHQGINPYIPL-D----------YELE---HFDL---PKFSYYALGHIHKRI-LERF----- 215 (386)
T ss_dssp HHHHHHHHHHTCSSEEEEECCCCTTTSSS-S----------CSSC---GGGS---CCCSEEEECSCCSCE-EEEC-----
T ss_pred HHHHhhhhcccCCCEEEEECcCccccCCC-C----------cccC---HHHh---hhCCeEEccCCCCCc-cccC-----
Confidence 2332211 13568899999998765220 0 0000 1111 137999999998763 2222
Q ss_pred cceeEEEEcCCCCC-c--c------cceeEEEeccCC
Q 008885 222 VHVTRFLGLAPVGN-K--E------KQKFIHALSPTP 249 (550)
Q Consensus 222 ~~~TRFI~La~~g~-~--~------K~Kw~yAf~i~p 249 (550)
..+.+++.|.... . . ..|-++-+.+..
T Consensus 216 -~~~~i~ypGS~~~~~~~e~~~~~~~~kg~~lv~i~~ 251 (386)
T 3av0_A 216 -NDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFSG 251 (386)
T ss_dssp -SSSEEEECCCSSCCSGGGTHHHHHHCSEEEEEECCS
T ss_pred -CCceEEECCcccccCcchhccccCCCCEEEEEEEec
Confidence 2467888877632 1 1 135555566654
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=98.76 E-value=5e-08 Score=102.47 Aligned_cols=215 Identities=12% Similarity=0.092 Sum_probs=111.0
Q ss_pred CEEEEEcCCCCChH---------------HHHHHHHHHhhhcCCCcEEEEecCCC-CC---ChhhHHHHHHHhcccCCCC
Q 008885 4 PRILLCGDVLGRLN---------------QLFKRVQSVNKSAGPFDAVLCVGQFF-PD---SSELLDEFMNYVEGRSEIP 64 (550)
Q Consensus 4 ~KILv~GDvhG~~~---------------~l~~kv~~l~~k~GpfD~li~~GDff-~~---~~~~~~~~~~~l~g~~~~p 64 (550)
||||+++|+|.... .+++++-.+..+. ..|+||++||+| .. .......+.+++......
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~-~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~- 78 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKR-EVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT- 78 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHH-TCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH-
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhc-CCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC-
Confidence 79999999997543 3444444433333 479999999999 42 222233344444322334
Q ss_pred ccEEEEecCCCChH-HHHHHhhccccccCcccCCceecCcEEEcCCCCeEEE---cC--eEEEEEeCccCCCCCCCCCCC
Q 008885 65 IPTYFIGDYGVGAA-KVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL---HG--LSVAYLSGRQSSEGQQFGTYS 138 (550)
Q Consensus 65 ~ptyfv~GNhe~~~-~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i---~G--lrIa~lgG~~~~~~~~~~~~t 138 (550)
+|+|+|.||||... .++..+. ..+.+|+.++.....+.+ .| +.|.++...... .....+.
T Consensus 79 ~~v~~i~GNHD~~~~~~~~~~~------------~~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~--~~~~~~~ 144 (379)
T 3tho_B 79 APVVVLPGNQDWKGLKLFGNFV------------TSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDES--EALRKNE 144 (379)
T ss_dssp SCEEECCCTTSCTTHHHHHHHH------------HTTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC------CHH
T ss_pred CCEEEEcCCCccccCccccccc------------cccCCcceeecccceEEEEcCCCCEEEEEECCCCCHH--HHhhhhc
Confidence 89999999998542 1222221 123467766654344443 35 666666543221 1111121
Q ss_pred HHHHH----HHHH---hhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcc
Q 008885 139 QDDVD----ALRA---LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 211 (550)
Q Consensus 139 e~di~----~L~~---l~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~ 211 (550)
.+... .+.. .......+.|+++|..+.|....+... .... ..+...+....+.|+++||.|...
T Consensus 145 ~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~se--------~~~~-~~v~~~~~~~~~dyvalGH~H~~q 215 (379)
T 3tho_B 145 GDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIE--------QGRE-IIINRALIPSVVDYAALGHIHSFR 215 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------------CS-CCBCGGGSCTTSSEEEEESCSSCE
T ss_pred cchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCccCCCCc--------cccc-cccCHHHcCcCCCEEEcccccCCe
Confidence 22111 1221 111246789999999988753211100 0000 111111112468999999998764
Q ss_pred ccccccCCCCcceeEEEEcCCCCC----ccc-ceeEEEeccCCCC
Q 008885 212 AREPYSNVDAVHVTRFLGLAPVGN----KEK-QKFIHALSPTPAA 251 (550)
Q Consensus 212 er~Py~~~~~~~~TRFI~La~~g~----~~K-~Kw~yAf~i~p~~ 251 (550)
.. ....++++.|.... ... .|-++-+.+++..
T Consensus 216 ~~--------~~~~~i~y~GS~~~~~f~E~~~~k~~~lv~~~~~~ 252 (379)
T 3tho_B 216 EI--------QKQPLTIYPGSLIRIDFGEEADEKGAVFVELKRGE 252 (379)
T ss_dssp EE--------EETTEEEECCCSSCCSGGGSSSCCEEEEEECCSSS
T ss_pred Ee--------CCCCcEEecCCCCCCCcccccCCCEEEEEEEcCCC
Confidence 31 11135666666521 112 4677777776543
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.63 E-value=1.8e-07 Score=96.25 Aligned_cols=73 Identities=18% Similarity=0.234 Sum_probs=47.1
Q ss_pred CEEEEEcCCCCChH------------HHHHHHHHHhhhcCCCcEEEEecCCCCCC---hhhHHHHHHHhcccCCCCccEE
Q 008885 4 PRILLCGDVLGRLN------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDS---SELLDEFMNYVEGRSEIPIPTY 68 (550)
Q Consensus 4 ~KILv~GDvhG~~~------------~l~~kv~~l~~k~GpfD~li~~GDff~~~---~~~~~~~~~~l~g~~~~p~pty 68 (550)
|||++++|+|.... ..++++-.+..+. ..|+||++||+|... ......+.+++......++|+|
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~ 79 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQE-NVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVF 79 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHT-TCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhc-CCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEE
Confidence 79999999998642 2333332222233 479999999998632 1223334444433244578999
Q ss_pred EEecCCCCh
Q 008885 69 FIGDYGVGA 77 (550)
Q Consensus 69 fv~GNhe~~ 77 (550)
+|.||||..
T Consensus 80 ~v~GNHD~~ 88 (333)
T 1ii7_A 80 AIEGNHDRT 88 (333)
T ss_dssp EECCTTTCC
T ss_pred EeCCcCCCc
Confidence 999999964
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.39 E-value=5.2e-07 Score=86.72 Aligned_cols=69 Identities=9% Similarity=0.151 Sum_probs=50.0
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChh-------hHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-------LLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~-------~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
|||++++|+||+++.+-+.++.+++. +.|+||++||++..... ...++.+++ .+++.|+|+|.||||.
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~--~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l---~~~~~~v~~V~GNHD~ 100 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQS--GAQWLVILGDVLNHGPRNALPEGYAPAKVVERL---NEVAHKVIAVRGNCDS 100 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHH--TCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHH---HTTGGGEEECCCTTCC
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhc--CCCEEEECCCccccCcccccccccCHHHHHHHH---HhcCCceEEEECCCch
Confidence 79999999999988766666665543 36999999999743211 134555666 3445799999999986
Q ss_pred h
Q 008885 77 A 77 (550)
Q Consensus 77 ~ 77 (550)
.
T Consensus 101 ~ 101 (208)
T 1su1_A 101 E 101 (208)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=98.35 E-value=6.7e-06 Score=87.30 Aligned_cols=209 Identities=12% Similarity=0.039 Sum_probs=112.0
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh------hhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS------ELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~------~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
.+||+++||.|.... ..+.++.+.+...+.|+||++||+.-... ...+++.+++.. ....+|+|++.||||.
T Consensus 126 ~~~f~~~gD~~~~~~-~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~-l~~~~P~~~v~GNHD~ 203 (426)
T 1xzw_A 126 PYVFGLIGDIGQTHD-SNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSER-SVAYQPWIWTAGNHEI 203 (426)
T ss_dssp CEEEEEECSCTTBHH-HHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHH-HHTTSCEECCCCGGGC
T ss_pred CeEEEEEEeCCCCCc-hHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHH-HHhcCCEEEecccccc
Confidence 479999999998643 23445555544336899999999974211 112234444432 2236899999999985
Q ss_pred hHHH-------HHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHH-h
Q 008885 77 AAKV-------LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA-L 148 (550)
Q Consensus 77 ~~~~-------l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~-l 148 (550)
.... +..+.. .+ ..+..+.....+.+ -.++.++++|.+|...... . ...++.+-|++ |
T Consensus 204 ~~~~~~~~~~~~~~~~~-~f--~~p~~~~~~~~~~~-----ys~~~g~~~~i~Ldt~~~~-----~-~~~~Q~~WL~~~L 269 (426)
T 1xzw_A 204 DYAPDIGEYQPFVPFTN-RY--PTPHEASGSGDPLW-----YAIKRASAHIIVLSSYSGF-----V-KYSPQYKWFTSEL 269 (426)
T ss_dssp CCBGGGTBCSTTHHHHH-HS--CCCCGGGTCSSTTS-----EEEEETTEEEEECCTTSCC-----S-TTSHHHHHHHHHH
T ss_pred ccCCccccccCChhheE-EE--eCCcccCCCCCCCe-----EEEEECCEEEEEeeCcccC-----C-CCHHHHHHHHHHH
Confidence 3210 000000 00 00000000001111 1235678888888753211 1 12333444443 2
Q ss_pred hcC---CCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCC-----
Q 008885 149 AEE---PGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVD----- 220 (550)
Q Consensus 149 ~~~---~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~----- 220 (550)
+.. ..+--|+++|.|+........ .. ...-...+.+++.+.+....|+||.|.+.-..|+.+..
T Consensus 270 ~~~~~~~~~w~Iv~~H~P~~~~~~~~~----~~----~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~ 341 (426)
T 1xzw_A 270 EKVNRSETPWLIVLVHAPLYNSYEAHY----ME----GEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVN 341 (426)
T ss_dssp HHCCTTTCCEEEEECSSCSSCCBSTTT----TT----THHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTT
T ss_pred HhhhhcCCCEEEEEeccCceeCCCccc----CC----CHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccC
Confidence 221 233569999999875422100 00 00013466778888899999999999755555654321
Q ss_pred -------CcceeEEEEcCCCCC
Q 008885 221 -------AVHVTRFLGLAPVGN 235 (550)
Q Consensus 221 -------~~~~TRFI~La~~g~ 235 (550)
....|.+|..|.-|+
T Consensus 342 g~~~~~~~~~g~~yi~~G~gG~ 363 (426)
T 1xzw_A 342 AKCTPVSDESAPVYITIGDGGN 363 (426)
T ss_dssp CCCCCEECTTSCEEEEECCSCC
T ss_pred CccccccCCCccEEEEeCCCcc
Confidence 134677888777665
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.34 E-value=1.3e-05 Score=87.22 Aligned_cols=211 Identities=11% Similarity=0.015 Sum_probs=109.7
Q ss_pred CCEEEEEcCCCCChH----------HHHHHHHHHhhh---cCCCcEEEEecCCCCCChh----hHHHHHHHhcccCCCCc
Q 008885 3 PPRILLCGDVLGRLN----------QLFKRVQSVNKS---AGPFDAVLCVGQFFPDSSE----LLDEFMNYVEGRSEIPI 65 (550)
Q Consensus 3 ~~KILv~GDvhG~~~----------~l~~kv~~l~~k---~GpfD~li~~GDff~~~~~----~~~~~~~~l~g~~~~p~ 65 (550)
.++||.++|+||++. .+...++++.+. .++-|++|.+||++..... ..+.+.+.| ..++
T Consensus 8 ~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~l---n~lg- 83 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGM---NLVG- 83 (516)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHH---HHHT-
T ss_pred EEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHH---hccC-
Confidence 478999999999743 344444444432 2456899999999753211 011222333 2233
Q ss_pred cEEEEecCCCChH--HHH-HHhhccccccCcccCCceecCcEEEcC-------CCCeEEEcCeEEEEEeCccCCCCC--C
Q 008885 66 PTYFIGDYGVGAA--KVL-LAASKNSANQGFKMDGFKVTDNLFWLK-------GSGNFTLHGLSVAYLSGRQSSEGQ--Q 133 (550)
Q Consensus 66 ptyfv~GNhe~~~--~~l-~~l~~~~~~~~~~~~g~ei~~Nl~~Lg-------~~gv~~i~GlrIa~lgG~~~~~~~--~ 133 (550)
+.+++.||||... +.+ +.+.. .+-..++.|++.-. ...+++.+|++|+.+|-....... .
T Consensus 84 ~d~~~~GNHEfd~g~~~l~~~~~~--------~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~ 155 (516)
T 1hp1_A 84 YDAMAIGNHEFDNPLTVLRQQEKW--------AKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGN 155 (516)
T ss_dssp CCEEECCGGGGSSCHHHHHHHHHH--------CSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSS
T ss_pred CCEEeeccccccCCHHHHHHHHhh--------CCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccC
Confidence 3488999998642 122 22221 11235677876422 224567899999999865332110 0
Q ss_pred -----CCCCC--HHHHHH-HHHhhc-CCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEE
Q 008885 134 -----FGTYS--QDDVDA-LRALAE-EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIA 204 (550)
Q Consensus 134 -----~~~~t--e~di~~-L~~l~~-~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~ 204 (550)
...|. .+.++. +..+.. ....+=|+|+|........... ...+...+.+.+...++...++
T Consensus 156 p~~~~~~~~~d~~~~~~~~v~~l~~~~~~d~iI~l~H~g~~~~~~~~~----------~~~~~~~la~~~~~~~iDlilg 225 (516)
T 1hp1_A 156 PEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGS----------NAPGDVEMARALPAGSLAMIVG 225 (516)
T ss_dssp CCSCTTEEECCHHHHHHHHHHHHHHHTCCSEEEEEEESCCCGGGCCTT----------SCCCHHHHHHHSCTTSSSEEEC
T ss_pred cCccCCcEEeCHHHHHHHHHHHHHhcCCCCEEEEEecCCccCCCcccc----------cCchHHHHHHhCCCCceeEEEC
Confidence 01222 122322 222221 1223447889987754321100 1134444433333334789999
Q ss_pred ccCCCcccc-------ccccCC-----CCcceeEEEEcCCCCC
Q 008885 205 GSKGVFYAR-------EPYSNV-----DAVHVTRFLGLAPVGN 235 (550)
Q Consensus 205 Gh~~~f~er-------~Py~~~-----~~~~~TRFI~La~~g~ 235 (550)
||.|..+.. .+|... .....|-++..+.+|.
T Consensus 226 GHtH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ag~~g~ 268 (516)
T 1hp1_A 226 GHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGK 268 (516)
T ss_dssp CSSCCBCCEEETTEECSSCCTTSCCCCEEETTEEEECBCSTTS
T ss_pred CCCCcccccCCccccccccCCCccccccCCCCcEEEecChhhh
Confidence 999876542 112110 0124588888888775
|
| >3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=3.5e-07 Score=87.20 Aligned_cols=86 Identities=6% Similarity=0.052 Sum_probs=62.6
Q ss_pred EEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCC------HHHHHHHHHHHH-H-HHHHHhh-----------cCC-
Q 008885 405 IVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTS------PECEKELGRFQN-S-LMMYYKN-----------QGK- 464 (550)
Q Consensus 405 iis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~------~~~~~Ei~~~~~-~-L~~~~~~-----------~~~- 464 (550)
||+.++.++++++..|.++||+||||.+|+.++..+. .++..+|..+.. . |.+++.. .|+
T Consensus 23 ~v~edd~~~af~D~~P~a~~H~LVIPk~h~~~~~~p~~al~d~~~Ll~~m~~la~~~~l~~~~~~~~~~~~~~~~~~~~~ 102 (204)
T 3sp4_A 23 VIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQLTNEALC 102 (204)
T ss_dssp EEEECSSEEEEECSSCSSSSEEEEEECCTTTTTSCHHHHHHHCHHHHHHHHHHHHTTTHHHHHHHHHHHSCTTCCHHHHH
T ss_pred EEEEcCCEEEEeCCCCCCCccEEEEeccccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCcCCee
Confidence 8999999999999999999999999999999988643 356777777766 5 5555531 111
Q ss_pred ceEEEe-ecCCCcCeEEEEEeecCCCc
Q 008885 465 EAVFFE-WLSKRGTHANLQAVPIPTSK 490 (550)
Q Consensus 465 ~~v~~E-~~~~~~~H~hi~~vPvp~~~ 490 (550)
..+-+. .......|+|+|||-.+..-
T Consensus 103 ~~i~~GfHa~PSm~HLHLHVIS~Df~s 129 (204)
T 3sp4_A 103 NYIKVGFHAGPSMNNLHLHIMTLDHVS 129 (204)
T ss_dssp TTEEEEEESSCSSSSCCEEEEESCCCC
T ss_pred eeEeccCCCCCcccceeEEEeccCCCC
Confidence 122222 24445789999999876553
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=1.1e-05 Score=85.55 Aligned_cols=191 Identities=15% Similarity=0.081 Sum_probs=101.3
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh------hhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS------ELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~------~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
.+||+++||+|..... .+.++.+.+.....|+||++||+.-... ...+++.+++.. ....+|+|++.||||.
T Consensus 119 ~~~f~~igD~~~~~~~-~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~-~~~~~P~~~v~GNHD~ 196 (424)
T 2qfp_A 119 PYTFGLIGDLGQSFDS-NTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTER-SVAYQPWIWTAGNHEI 196 (424)
T ss_dssp CEEEEEECSCTTBHHH-HHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHH-HHTTSCEEECCCHHHH
T ss_pred CeEEEEEEeCCCCCCh-HHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHH-HHhcCCeEeecCCccc
Confidence 5799999999987643 3345555544335799999999975321 112334444432 1235899999999973
Q ss_pred hHH--H-----HHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHH-h
Q 008885 77 AAK--V-----LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA-L 148 (550)
Q Consensus 77 ~~~--~-----l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~-l 148 (550)
... + +..+.. .+ ..+..+.....+++ -.+++++++|.+|..... ....+ ++.+-|++ |
T Consensus 197 ~~~~~~~~~~~~~~~~~-~f--~~P~~~~~~~~~~~-----ys~~~g~~~~i~Ldt~~~-----~~~~~-~Q~~WL~~~L 262 (424)
T 2qfp_A 197 EFAPEINETEPFKPFSY-RY--HVPYEASQSTSPFW-----YSIKRASAHIIVLSSYSA-----YGRGT-PQYTWLKKEL 262 (424)
T ss_dssp CCBGGGTBCSTTHHHHH-HC--CCCGGGGTCSSTTS-----EEEEETTEEEEECCTTSC-----CSTTS-HHHHHHHHHH
T ss_pred ccCCcccccccchhhhh-hc--cCCccccCCCCCcE-----EEEEECCEEEEEecCCcc-----CCCcH-HHHHHHHHHH
Confidence 210 0 000000 00 00000000001111 134577889998864321 11223 33444443 2
Q ss_pred hcC---CCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcccccccc
Q 008885 149 AEE---PGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYS 217 (550)
Q Consensus 149 ~~~---~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~ 217 (550)
+.. ..+.-|+++|.|+........ ..+ ..-...+.+++.+.+..+.|+||.|.+--..|..
T Consensus 263 ~~~~~~~~~~~Iv~~H~P~~~~~~~~~----~~~----~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~ 326 (424)
T 2qfp_A 263 RKVKRSETPWLIVLMHSPLYNSYNHHF----MEG----EAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVS 326 (424)
T ss_dssp HHCCTTTCCEEEEECSSCSSCCBSTTT----TTT----HHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEE
T ss_pred hhhcccCCCEEEEEeCcCceecCcccc----ccc----HHHHHHHHHHHHHhCCcEEEECChhhhheecccc
Confidence 222 134579999999875421100 000 0012456678888999999999998744444543
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.16 E-value=1.3e-05 Score=84.92 Aligned_cols=50 Identities=10% Similarity=-0.071 Sum_probs=31.7
Q ss_pred hCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCC------cccceeEEEeccCC
Q 008885 197 IKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN------KEKQKFIHALSPTP 249 (550)
Q Consensus 197 lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~------~~K~Kw~yAf~i~p 249 (550)
....|++.||.|..+... ..+ ....+.+++.|.... ....|-++-+.|+.
T Consensus 237 ~~~DyvalGH~H~~~~~~-~~~--~~~g~~i~~PGS~~~~s~~e~E~~~kg~~lvei~~ 292 (417)
T 4fbw_A 237 DFYDFVLWGHEHECLIDG-SYN--PTQKFTVVQPGSTIATSLSPGETAPKHCGILNITG 292 (417)
T ss_dssp TTCSEEEEESCCSCEEEE-EEE--TTTTEEEEECCCSSCSSCCHHHHSCCEEEEEEEET
T ss_pred cCCCEEEecCccccceec-ccc--CCCCEEEEECCCCCcCCCccccCCCCEEEEEEEEC
Confidence 457899999999765421 111 133588999998632 11356777777764
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=1.2e-05 Score=86.22 Aligned_cols=49 Identities=10% Similarity=-0.052 Sum_probs=30.6
Q ss_pred CCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCC------cccceeEEEeccCC
Q 008885 198 KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN------KEKQKFIHALSPTP 249 (550)
Q Consensus 198 kPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~------~~K~Kw~yAf~i~p 249 (550)
...|++.||.|..+.. +..+ ....+.+++.|.... ....|-++-+.|+.
T Consensus 301 g~DyValGH~H~~~~~-~~~~--~~~g~~ivyPGS~~~~s~~e~E~~~kg~~lveI~~ 355 (472)
T 4fbk_A 301 FYDFVLWGHEHECLID-GSYN--PTQKFTVVQPGSTIATSLSPGETAPKHCGILNITG 355 (472)
T ss_dssp TCSEEEEESCCSCEEE-EEEE--TTTTEEEEECCCSSCSSCCGGGCSCCEEEEEEEET
T ss_pred CCCEEEecCcccceee-eccc--CCCCeEEEECCCccccccCccCCCCCEEEEEEEEC
Confidence 5679999999876542 1111 123578999988631 11356777777764
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.12 E-value=3.3e-05 Score=84.38 Aligned_cols=205 Identities=9% Similarity=0.022 Sum_probs=110.3
Q ss_pred CCEEEEEcCCCCChH----------------HHHHHHHHHhhhcCCCcEEEEecCCCCCChhh---------HHHHHHHh
Q 008885 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL---------LDEFMNYV 57 (550)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~---------~~~~~~~l 57 (550)
+++||.++|+||++. ++...++++.++. +-.++|.+||++...... .....+.+
T Consensus 19 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~-~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~l 97 (527)
T 3qfk_A 19 NIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQY-DQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFY 97 (527)
T ss_dssp EEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTS-SEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHHH
T ss_pred cEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcC-CCEEEEECCCcCCCcHHHHHHhhcccCcchHHHHH
Confidence 478999999999863 5555566665543 445778899997643111 02233343
Q ss_pred cccCCCCccEEEEecCCCChH---HHHHHhhccccccCcccCCceecCcEEEc------CCCCeEEEcCeEEEEEeCccC
Q 008885 58 EGRSEIPIPTYFIGDYGVGAA---KVLLAASKNSANQGFKMDGFKVTDNLFWL------KGSGNFTLHGLSVAYLSGRQS 128 (550)
Q Consensus 58 ~g~~~~p~ptyfv~GNhe~~~---~~l~~l~~~~~~~~~~~~g~ei~~Nl~~L------g~~gv~~i~GlrIa~lgG~~~ 128 (550)
..+++. +++.||||... .+.+.+.. .+-..++.|++.. ....+++.+|++|+.+|-...
T Consensus 98 ---n~lg~D-~~t~GNHefd~G~~~l~~~~~~--------~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~ 165 (527)
T 3qfk_A 98 ---NRMAFD-FGTLGNHEFNYGLPYLKDTLRR--------LNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQ 165 (527)
T ss_dssp ---HHTCCC-EECCCGGGGTTCHHHHHHHHHH--------CSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECT
T ss_pred ---HhcCCc-EEeccccccccCHHHHHHHHHh--------CCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccC
Confidence 334433 67789998432 22233321 1123567787753 123455789999999987543
Q ss_pred CCCC--C-----CCCCC--HHHHHH-HHHhhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-
Q 008885 129 SEGQ--Q-----FGTYS--QDDVDA-LRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI- 197 (550)
Q Consensus 129 ~~~~--~-----~~~~t--e~di~~-L~~l~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l- 197 (550)
.... . ...|. .+.+++ +..+. ..-.+=|+|+| |+......... +. ....|.....+|++++
T Consensus 166 ~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H-~G~~~d~~~~~---~~---~~~~~e~~~~~la~~~~ 237 (527)
T 3qfk_A 166 FIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYH-GGFEKDLESGT---PT---EVLTGENEGYAMLEAFS 237 (527)
T ss_dssp TGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEE-CCCSBCTTTCC---BS---SCCSSSCCHHHHHHHHG
T ss_pred CcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeC-cCcccccccCc---cc---cccccchHHHHHHHhcC
Confidence 1100 0 01222 122222 22221 11234468888 43322100000 00 0012333455666665
Q ss_pred -CCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCC
Q 008885 198 -KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 198 -kPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~ 235 (550)
.....++||.|..+.. ....|..+..|.+|.
T Consensus 238 ~giDlIlgGHtH~~~~~-------~v~~~~ivqag~~g~ 269 (527)
T 3qfk_A 238 KDIDIFITGHQHRQIAE-------RFKQTAVIQPGTRGT 269 (527)
T ss_dssp GGCSEEECCSSCCEEEE-------EETTEEEEEECSTTS
T ss_pred CCCcEEEECCCCcccce-------EECCEEEeccChhhC
Confidence 6889999999886651 234688888888875
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=98.06 E-value=4.4e-06 Score=86.48 Aligned_cols=209 Identities=11% Similarity=0.024 Sum_probs=108.2
Q ss_pred CCEEEEEcCCCCChH---HHHHHHHHHhhhcCCCcEEEEecCCCCCCh------hhHHHHHHHhccc-CCCCccEEEEec
Q 008885 3 PPRILLCGDVLGRLN---QLFKRVQSVNKSAGPFDAVLCVGQFFPDSS------ELLDEFMNYVEGR-SEIPIPTYFIGD 72 (550)
Q Consensus 3 ~~KILv~GDvhG~~~---~l~~kv~~l~~k~GpfD~li~~GDff~~~~------~~~~~~~~~l~g~-~~~p~ptyfv~G 72 (550)
+++++++||.+.... .+.+.+.++.++. ++|+||.+||++-.+. ...+.|...+... ....+|.|.|.|
T Consensus 3 ~l~f~~igD~g~g~~~q~~va~~m~~~~~~~-~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNE-RVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CEEEEECCSCBSCCHHHHHHHHHHHHHHHHT-TCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred eEEEEEEecCCCCCchHHHHHHHHHHHHhhc-CCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 579999999997432 2233344444444 6899999999864321 1112333333332 346799999999
Q ss_pred CCCChHHHHHHhhccc--------------cccCcccCCceecCcEEEcCCCCeEEE--------cC-----eEEEEEeC
Q 008885 73 YGVGAAKVLLAASKNS--------------ANQGFKMDGFKVTDNLFWLKGSGNFTL--------HG-----LSVAYLSG 125 (550)
Q Consensus 73 Nhe~~~~~l~~l~~~~--------------~~~~~~~~g~ei~~Nl~~Lg~~gv~~i--------~G-----lrIa~lgG 125 (550)
|||-..+...++.-.. .... .....|..|+.+|--. ..+++ .| ++|..|--
T Consensus 82 NHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~-~~~~rw~~P~~yY~~~-~~f~~~~~~~~~~~g~~~~~v~fi~LDT 159 (342)
T 3tgh_A 82 TRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADA-TNYPKWIMPNYWYHYF-THFTVSSGPSIVKTGHKDLAAAFIFIDT 159 (342)
T ss_dssp HHHHTSCHHHHHHHHHC---------------CC-CSSCEEECSSSSEEEE-EEEEEC---------CEEEEEEEEECCT
T ss_pred CCccCCCchHhhhhhhcccccccccccccccccc-cCCCCccCCcceEEEE-EEeeccccccccccCCCCceEEEEEEeC
Confidence 9974322222221000 0000 0123466666544210 00111 13 45555533
Q ss_pred ccCCCCCCCCCC-------CHHHHHHHHHhhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhC
Q 008885 126 RQSSEGQQFGTY-------SQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIK 198 (550)
Q Consensus 126 ~~~~~~~~~~~~-------te~di~~L~~l~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lk 198 (550)
...... ..| .+++.+-|++..+ ....=|++.|.|+.......+. ..-...+..|+.+.+
T Consensus 160 ~~l~~~---~~~~~~~~~~~~~Ql~WLe~~L~-~~~~~IV~~HhP~~~~~~~~~~----------~~l~~~l~~ll~~~~ 225 (342)
T 3tgh_A 160 WVLSSN---FPYKKIHEKAWNDLKSQLSVAKK-IADFIIVVGDQPIYSSGYSRGS----------SYLAYYLLPLLKDAE 225 (342)
T ss_dssp TTTSTT---CSCHHHHHHHHHHHHHHHHHHHH-HCSEEEEECSSCSSCSSTTCCC----------HHHHHHTHHHHHHTT
T ss_pred cccccC---CcccccchHHHHHHHHHHHHhhc-cCCcEEEEECCCCCCCCCCCCc----------HHHHHHHHHHHHHcC
Confidence 211110 111 1122222333111 2356689999999865321110 011356778899999
Q ss_pred CCEEEEccCCCccccccccCCCCcceeEEEEcCCCCC
Q 008885 199 PRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 199 PRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~ 235 (550)
....|+||.|.+.-..+ ..+.+|..|..+.
T Consensus 226 VdlvlsGH~H~~~~~~~-------~g~~~iv~Ga~g~ 255 (342)
T 3tgh_A 226 VDLYISGHDNNMEVIED-------NDMAHITCGSGSM 255 (342)
T ss_dssp CCEEEECSSSSEEEEEE-------TTEEEEEECCSSC
T ss_pred CCEEEECCCcceeEEee-------CCcEEEEeCcccc
Confidence 99999999886543221 2388888887654
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.99 E-value=4.1e-06 Score=80.77 Aligned_cols=67 Identities=15% Similarity=0.183 Sum_probs=47.9
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
.|||+++||+||+++.+.+.++.+... ...|.+|++||+....... .+..+++. ..++++|.||||.
T Consensus 12 ~~~i~visDiHg~~~~l~~~l~~~~~~-~~~d~~i~~GD~~~~g~~~-~~~~~~l~-----~~~~~~v~GNhd~ 78 (221)
T 1g5b_A 12 YRNIWVVGDLHGCYTNLMNKLDTIGFD-NKKDLLISVGDLVDRGAEN-VECLELIT-----FPWFRAVRGNHEQ 78 (221)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCC-TTTCEEEECSCCSSSSSCH-HHHHGGGG-----STTEEECCCHHHH
T ss_pred CceEEEEEcCCCCHHHHHHHHHHccCC-CCCCEEEEeCCccCCCCCh-HHHHHHHh-----cCCEEEEccCcHH
Confidence 489999999999998877666665432 2479999999997643322 23444442 2489999999973
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.93 E-value=4.7e-06 Score=83.88 Aligned_cols=68 Identities=18% Similarity=0.210 Sum_probs=47.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
|||+|+||+||+++.+.+.++.+... .+.|.+|++||+..-..... +..+++ ..++.++++|.||||.
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~-~~~d~~v~lGD~vdrG~~s~-~~l~~l---~~l~~~~~~v~GNHe~ 68 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFT-PGKDTLWLTGDLVARGPGSL-DVLRYV---KSLGDSVRLVLGNHDL 68 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCC-TTTCEEEECSCCSSSSSCHH-HHHHHH---HHTGGGEEECCCHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCC-CCCCEEEEeCCcCCCCCccH-HHHHHH---HhCCCceEEEECCCcH
Confidence 68999999999999877666655431 24699999999975433222 334444 2344589999999973
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.88 E-value=8.6e-06 Score=81.04 Aligned_cols=66 Identities=17% Similarity=0.291 Sum_probs=46.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
+||+++||+||+++.+.+.++.+.. .++.|.+|++||+........ +..+++. . .++|+|.||||.
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~-~~~~d~ii~~GD~vd~g~~~~-~~l~~l~---~--~~~~~v~GNHd~ 84 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSF-KQGSDTLVAVGDLVNKGPDSF-GVVRLLK---R--LGAYSVLGNHDA 84 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTC-CTTTSEEEECSCCSSSSSCHH-HHHHHHH---H--HTCEECCCHHHH
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhc-cCCCCEEEEecCCCCCCCCHH-HHHHHHH---H--CCCEEEeCcChH
Confidence 4999999999999887666665543 224599999999975433222 3334442 1 479999999973
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00099 Score=72.36 Aligned_cols=204 Identities=14% Similarity=0.092 Sum_probs=104.4
Q ss_pred CCEEEEEcCCCCChH------------------HHHHHHHHHhhhcCCCcEEEE-ecCCCCCChh----hHHHHHHHhcc
Q 008885 3 PPRILLCGDVLGRLN------------------QLFKRVQSVNKSAGPFDAVLC-VGQFFPDSSE----LLDEFMNYVEG 59 (550)
Q Consensus 3 ~~KILv~GDvhG~~~------------------~l~~kv~~l~~k~GpfD~li~-~GDff~~~~~----~~~~~~~~l~g 59 (550)
.++||.++|+||++. .+...++.+.+++ + |+|++ +||++..... ..+.+.+.+
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~-~-~~llldaGD~~~g~~~~~~~~g~~~~~~l-- 81 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKN-K-ATWFFDAGDYFTGPYISSLTKGKAIIDIM-- 81 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHC-S-SEEEEECSCCSSSSHHHHTTTTHHHHHHH--
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcC-C-CeEEEECCCCCCCchhhhhcCChHHHHHH--
Confidence 479999999998753 4455555555544 3 66666 9998754210 011233444
Q ss_pred cCCCCccEEEEecCCCChH---HHHHHhhccccccCcccCCceecCcEEEcC--------CCCeEEEcCeEEEEEeCccC
Q 008885 60 RSEIPIPTYFIGDYGVGAA---KVLLAASKNSANQGFKMDGFKVTDNLFWLK--------GSGNFTLHGLSVAYLSGRQS 128 (550)
Q Consensus 60 ~~~~p~ptyfv~GNhe~~~---~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg--------~~gv~~i~GlrIa~lgG~~~ 128 (550)
..+.. -+++.||||... .+.+.+.. .+-..++.|++.-. ..-+++.+|++|+.+|-...
T Consensus 82 -n~lg~-D~~tlGNHEfd~G~~~l~~~l~~--------~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~ 151 (509)
T 3ive_A 82 -NTMPF-DAVTIGNHEFDHGWDNTLLQLSQ--------AKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGV 151 (509)
T ss_dssp -TTSCC-SEECCCGGGGTTCHHHHHHHHTT--------CSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECH
T ss_pred -HhcCC-cEEeecccccccCHHHHHHHHhh--------CCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccC
Confidence 33433 367789999432 23333331 11235778887532 12355789999999987421
Q ss_pred ------CC-CC-CCCCCCH--HHHHH-HHHhhcCCCCcc--EEEeCCCCccccccccccccccccCCCCCCcHHHHHHHH
Q 008885 129 ------SE-GQ-QFGTYSQ--DDVDA-LRALAEEPGIVD--LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVA 195 (550)
Q Consensus 129 ------~~-~~-~~~~~te--~di~~-L~~l~~~~~~vD--ILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~ 195 (550)
.. .. ....|.+ +.+++ +..+. ..+| |+|+|.--.+-.. .. ... ....|...-.++++
T Consensus 152 ~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk---~~~D~iIvl~H~G~~~~~~-~~---~~~---~~~~~~~~d~~la~ 221 (509)
T 3ive_A 152 FAFNDTVSAATRVGIEARDEIKWLQRYIDELK---GKVDLTVALIHEGVPARQS-SM---GGT---DVRRALDKDIQTAS 221 (509)
T ss_dssp HHHHHHSCGGGCTTEEECCHHHHHHHHHHHHT---TTCSEEEEEEECSSCCCCC-CC---------CCCCCCHHHHHHHH
T ss_pred cccccccccccCCCCEEcCHHHHHHHHHHHHH---hcCCEEEEEeccCcCCccc-cc---ccc---ccccccchHHHHHh
Confidence 00 00 0112221 22222 22232 2255 4778864211100 00 000 01234444456666
Q ss_pred Hh-CCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCC
Q 008885 196 EI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 196 ~l-kPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~ 235 (550)
++ .....++||.|..+.. |. ....|-.+..+.+|.
T Consensus 222 ~~~giDlIlgGHtH~~~~~-~~----~~~~~~ivqag~~g~ 257 (509)
T 3ive_A 222 QVKGLDILITGHAHVGTPE-PI----KVGNTLILSTDSGGI 257 (509)
T ss_dssp HCSSCCEEEEESSCCCCSS-CE----EETTEEEECCCSTTS
T ss_pred cCCCCcEEEeCCcCccCCC-Ce----eeCCEEEEecChhhc
Confidence 54 3679999998865432 11 123466666666654
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00015 Score=77.14 Aligned_cols=74 Identities=18% Similarity=0.299 Sum_probs=45.7
Q ss_pred CCEEEEEcCCCCCh-----------HHHHHHHHHHhhhcCCCcEEEEecCCCCCCh---hhHHHHHHHhc----c-----
Q 008885 3 PPRILLCGDVLGRL-----------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS---ELLDEFMNYVE----G----- 59 (550)
Q Consensus 3 ~~KILv~GDvhG~~-----------~~l~~kv~~l~~k~GpfD~li~~GDff~~~~---~~~~~~~~~l~----g----- 59 (550)
.||||+++|+|-.. ...++++-.+..+. ..|+||++||+|.... .....+.+.|. |
T Consensus 32 ~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~-~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~~~ 110 (431)
T 3t1i_A 32 TFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQEN-EVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRPVQ 110 (431)
T ss_dssp EEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHT-TCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSCCC
T ss_pred CEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhc-CCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCccc
Confidence 48999999999532 12333333322333 4799999999986432 22222222222 1
Q ss_pred ------------------------cCCCCccEEEEecCCCCh
Q 008885 60 ------------------------RSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 60 ------------------------~~~~p~ptyfv~GNhe~~ 77 (550)
...+.+|+|+|.||||.+
T Consensus 111 ~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 111 FEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp CEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred ceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 124579999999999976
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=97.61 E-value=7.9e-05 Score=75.99 Aligned_cols=74 Identities=14% Similarity=0.187 Sum_probs=48.6
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
.+||.|+||+||++..|.+.++..... ..-+.+|++||+..-+....+.+.-++.-+...|-.++++-||||..
T Consensus 59 ~~ri~viGDIHG~~~~L~~ll~~~g~~-~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 59 TEKITVCGDTHGQFYDLLNIFELNGLP-SETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETD 132 (315)
T ss_dssp TCEEEEECCCTTCHHHHHHHHHHHCCC-BTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CceEEEEecCCCCHHHHHHHHHHhCCC-CCCCEEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccc
Confidence 378999999999999987766543221 12356999999976544433333322211133456699999999964
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.58 E-value=8.5e-05 Score=76.35 Aligned_cols=74 Identities=18% Similarity=0.239 Sum_probs=49.1
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
.|||.||||+||++..|.+.++.+... ..-+.+|++||+..-+....+.+.-++.-+...|-.++++-||||..
T Consensus 63 ~~ri~viGDIHG~~~~L~~ll~~~g~~-~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~ 136 (335)
T 3icf_A 63 DVKISVCGDTHGQFYDVLNLFRKFGKV-GPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESD 136 (335)
T ss_dssp TCEEEEECCCTTCHHHHHHHHHHHCCC-BTTEEEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred CceEEEEecCCCCHHHHHHHHHHcCCC-CCCcEEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhh
Confidence 378999999999999987766554221 12356999999976544433333322221234566699999999963
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=97.57 E-value=6.4e-05 Score=76.59 Aligned_cols=72 Identities=14% Similarity=0.240 Sum_probs=48.6
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcc-cCCCCccEEEEecCCCCh
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEG-RSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g-~~~~p~ptyfv~GNhe~~ 77 (550)
.++|+|+||+||++..+.+.++.+.. .+.|.+|++||+..-+....+. ..++.. +...|-.++++-||||..
T Consensus 49 ~~~i~viGDIHG~~~~L~~ll~~~~~--~~~~~~vflGD~VDRG~~s~ev-l~lL~~lk~~~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 49 RCPVTVCGDVHGQFHDLMELFRIGGK--SPDTNYLFMGDYVDRGYYSVET-VTLLVALKVRYRERITILRGNHESR 121 (309)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHCC--TTTSCEEECSCCSSSSTTHHHH-HHHHHHHHHHCTTTEEECCCTTSST
T ss_pred cCCEEEEecCCCCHHHHHHHHHHcCC--CCCCEEEEeCCccCCCCChHHH-HHHHHHHHhhCCCcEEEEeCCCCHH
Confidence 46899999999999988766654422 2457789999997544333333 233321 123456699999999974
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=97.56 E-value=8.1e-05 Score=80.08 Aligned_cols=74 Identities=14% Similarity=0.187 Sum_probs=49.5
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
.|||+||||+||++..|.+.++.+.. .++-|.+|++||+..-+....+.+.-++.-+...|-.++++.||||..
T Consensus 212 ~~~~~vigDiHG~~~~l~~~l~~~~~-~~~~~~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~ 285 (477)
T 1wao_1 212 TEKITVCGDTHGQFYDLLNIFELNGL-PSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETD 285 (477)
T ss_dssp SCEEEEECBCTTCHHHHHHHHHHHCC-CBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CcceEEEeCCCCCHHHHHHHHHHcCC-CCCcCeEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHH
Confidence 37899999999999988766655432 123467999999975443333333333211234567899999999963
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=97.55 E-value=5.2e-05 Score=78.33 Aligned_cols=73 Identities=8% Similarity=0.075 Sum_probs=48.0
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhc------CCCcEEEEecCCCCCChhhHHHHHHHhcccC----CCCccEEEEec
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSA------GPFDAVLCVGQFFPDSSELLDEFMNYVEGRS----EIPIPTYFIGD 72 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~------GpfD~li~~GDff~~~~~~~~~~~~~l~g~~----~~p~ptyfv~G 72 (550)
.|||+|+||+||+++.+.+.++.+.... ...|.+|++||+..-.....+ ..+++.... ..|..++++.|
T Consensus 70 ~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~e-vl~~l~~l~~~~~~~~~~v~~v~G 148 (342)
T 2z72_A 70 IKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNE-VLWFMYQLDQQARDAGGMVHLLMG 148 (342)
T ss_dssp CCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHH-HHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHH-HHHHHHHHHHHHhhCCCeEEEEec
Confidence 4799999999999988766665432110 136999999999754332222 223332111 35667999999
Q ss_pred CCCC
Q 008885 73 YGVG 76 (550)
Q Consensus 73 Nhe~ 76 (550)
|||.
T Consensus 149 NHE~ 152 (342)
T 2z72_A 149 NHEQ 152 (342)
T ss_dssp HHHH
T ss_pred CCcH
Confidence 9974
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.51 E-value=7.2e-05 Score=76.86 Aligned_cols=73 Identities=15% Similarity=0.283 Sum_probs=48.9
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
.++|+||||+||+++.|.+.++.+.. .+-|.+|++||+..-+....+.+.-++.-+...|-.++++-||||..
T Consensus 56 ~~~i~viGDIHG~~~~L~~ll~~~g~--~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 56 EAPLKICGDIHGQYYDLLRLFEYGGF--PPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp CSSEEEECBCTTCHHHHHHHHHHHCS--TTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cCceEEecCCCCCHHHHHHHHHHhCC--CCcceEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHh
Confidence 46899999999999998776665432 24588999999975443333333222211123456699999999964
|
| >1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00069 Score=70.19 Aligned_cols=111 Identities=12% Similarity=0.110 Sum_probs=73.7
Q ss_pred CCcccCCCCCCCcceEEE-----ECCEEEEEecCCCCCC------------C-----------eEEEEeccccCCCCCCC
Q 008885 390 ECWFCLSSPSVESHLIVS-----VGEYYYCALPKGPLVE------------D-----------HVLVIPVEHVPNTISTS 441 (550)
Q Consensus 390 ~C~FC~~~~~~~~hliis-----~g~~~yl~l~kgpl~~------------g-----------H~lIiP~~H~~s~~~l~ 441 (550)
.|.||-.+......-+.. -+-.++++.+++|..+ | ++||.+-+|..++.+|+
T Consensus 62 ~CpfCpg~~~~t~~e~~~~~~~~~~~~~~v~~N~fP~l~~~~~~~~~~~~~~l~~~~~~~G~~~Vii~sp~H~~~l~~ls 141 (351)
T 1z84_A 62 SCPFCIGREQECAPELFRVPDHDPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVHSIQLSDID 141 (351)
T ss_dssp CCTTSTTCGGGSSCEEEEESTTCSSCSEEEEECSSCSSBGGGTTTC--------CEEECBCEEEEEECCSSSSCCGGGSC
T ss_pred CCcCCCCCcccCCcccccccccCCCceEEEEcCCCccccCCCCCcccccccchhhccccCcceEEEEeCCCCCCCcHHCC
Confidence 699999875432222333 2567899999999773 5 88999999999999999
Q ss_pred HHHHHHHHHHH-HHHHHHHhhcCC-ceEEEeec----CCCcCeEEEEEeecCCC------chHHHHHHHHH
Q 008885 442 PECEKELGRFQ-NSLMMYYKNQGK-EAVFFEWL----SKRGTHANLQAVPIPTS------KAAAVQDIFNL 500 (550)
Q Consensus 442 ~~~~~Ei~~~~-~~L~~~~~~~~~-~~v~~E~~----~~~~~H~hi~~vPvp~~------~~~~~~~~F~~ 500 (550)
.+.+.++..+- +.+..+.+..+. .+.+||+. .-...|.|.|++-.|.- ..+.++.||++
T Consensus 142 ~~e~~~vi~~~~~~~~~L~~~~~~~yv~iF~N~G~~aGaSl~HpH~QI~a~~~~p~~~~~e~~~~~~y~~~ 212 (351)
T 1z84_A 142 PVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALPVVPPTVSSRLDGTKDYFEE 212 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCEEEEEEEcCcccCCCCcCccceeEecCcCChHHHHHHHHHHHHHhh
Confidence 99888887644 444444433333 45667721 12246888888876543 12356667765
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00012 Score=74.23 Aligned_cols=73 Identities=15% Similarity=0.283 Sum_probs=49.0
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
.++|.|+||+||++..|.+.++.+.. .+.|.+|++||+..-+....+.+.-++.-+...|-.++++-||||..
T Consensus 55 ~~~i~viGDIHG~~~~L~~ll~~~g~--~~~~~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 55 EAPLKICGDIHGQYYDLLRLFEYGGF--PPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp CSSEEEECBCTTCHHHHHHHHHHHCS--TTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CCCEEEEecCCCCHHHHHHHHHHhCC--CCCccEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhh
Confidence 36799999999999998766654322 24578999999976544333333222211234566799999999964
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00016 Score=77.85 Aligned_cols=73 Identities=14% Similarity=0.230 Sum_probs=48.5
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
.++|.||||+||++..|.+.++ +.. ..+.|.+|++||+..-+....+.+.-++.-+...|-.++++-||||..
T Consensus 82 ~~pI~VIGDIHGq~~dL~~LL~-~~g-~p~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 82 DAPVTVCGDIHGQFFDLMKLFE-VGG-SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp CSSEEEECCCTTCHHHHHHHHH-HHC-CTTTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCCHHHHHHHHH-hcC-CCCcceEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHH
Confidence 4689999999999999877665 222 235689999999975443323322222211123455699999999964
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0097 Score=65.61 Aligned_cols=110 Identities=16% Similarity=0.024 Sum_probs=64.8
Q ss_pred CEEEEEcCCCCChH---------------------HHHHHHHHHhhhcCCCcEEEEecCCCCCChh----hHHHHHHHhc
Q 008885 4 PRILLCGDVLGRLN---------------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----LLDEFMNYVE 58 (550)
Q Consensus 4 ~KILv~GDvhG~~~---------------------~l~~kv~~l~~k~GpfD~li~~GDff~~~~~----~~~~~~~~l~ 58 (550)
++||.++|+||++. ++...++.+.+++ +-.++|.+||++..... .-+...+.|
T Consensus 13 l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~-~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l- 90 (579)
T 3ztv_A 13 LSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKY-KNPLVLHAGDAITGTLYFTLFGGSADAAVM- 90 (579)
T ss_dssp EEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHS-SSEEEEECSCCSCSSHHHHTTTTHHHHHHH-
T ss_pred EEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCceeeeecCCHHHHHHH-
Confidence 78999999999854 3445555555554 44699999999754210 001122232
Q ss_pred ccCCCCccEEEEecCCCChHH--HH-HHhhccccccCcccCCceecCcEEEcC---------CCCeEEEcCeEEEEEeCc
Q 008885 59 GRSEIPIPTYFIGDYGVGAAK--VL-LAASKNSANQGFKMDGFKVTDNLFWLK---------GSGNFTLHGLSVAYLSGR 126 (550)
Q Consensus 59 g~~~~p~ptyfv~GNhe~~~~--~l-~~l~~~~~~~~~~~~g~ei~~Nl~~Lg---------~~gv~~i~GlrIa~lgG~ 126 (550)
..+.+ -+++.||||.... .+ ..+.. .+-..++.|++... ..-+++.+|++|+.+|=.
T Consensus 91 --n~lg~-D~~tlGNHEfd~G~~~l~~~~~~--------~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t 159 (579)
T 3ztv_A 91 --NAGNF-HYFTLGNHEFDAGNEGLLKLLEP--------LKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLD 159 (579)
T ss_dssp --HHHTC-SEEECCSGGGTTHHHHHHHHHTT--------CCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEE
T ss_pred --HhcCc-CeeeccccccccCHHHHHHHHHh--------cCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEE
Confidence 22223 3578899985432 22 22221 12235778887532 123556899999999873
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00022 Score=73.71 Aligned_cols=73 Identities=12% Similarity=0.200 Sum_probs=48.8
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
.++|.|+||+||++..|.+.++... ..+.|.+|++||+..-+....+.+.-++.-+...|-.++++-||||..
T Consensus 69 ~~pi~ViGDIHG~~~dL~~ll~~~g--~~~~~~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 69 DAPVTVCGDIHGQFFDLMKLFEVGG--SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHC--CTTTCCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred cccceeeccCCCCHHHHHHHHHhcC--CCCCcEEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhh
Confidence 3579999999999998876554321 224688999999976544333333322221234556699999999963
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.014 Score=63.98 Aligned_cols=111 Identities=10% Similarity=-0.088 Sum_probs=65.7
Q ss_pred CCEEEEEcCCCCCh-----------------HHHHHHHHHHhhhcCCCcEEEEecCCCCCChh----hHHHHHHHhcccC
Q 008885 3 PPRILLCGDVLGRL-----------------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----LLDEFMNYVEGRS 61 (550)
Q Consensus 3 ~~KILv~GDvhG~~-----------------~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~----~~~~~~~~l~g~~ 61 (550)
.++||.++|+||++ ..+...++++.+.+ |-.++|.+||++..... ....+.+.+ .
T Consensus 29 ~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~-~~~l~l~~GD~~~gs~~~~~~~~~~~~~~l---n 104 (552)
T 2z1a_A 29 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARA-KNPLFLDAGDVFQGTLYFNQYRGLADRYFM---H 104 (552)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHS-SSEEEEECSCCSSSSHHHHHHTTHHHHHHH---H
T ss_pred eEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCcHHHHHhCCcHHHHHH---H
Confidence 37899999999864 35556666666554 43488999999754211 011223333 2
Q ss_pred CCCccEEEEecCCCChH---HHHHHhhccccccCcccCCceecCcEEEcC---------CCCeEEEcCeEEEEEeCc
Q 008885 62 EIPIPTYFIGDYGVGAA---KVLLAASKNSANQGFKMDGFKVTDNLFWLK---------GSGNFTLHGLSVAYLSGR 126 (550)
Q Consensus 62 ~~p~ptyfv~GNhe~~~---~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg---------~~gv~~i~GlrIa~lgG~ 126 (550)
.+.. .+++.||||... .+.+.+.. .+-..++.|+..-+ ..-+++.+|++|+.+|=.
T Consensus 105 ~lg~-d~~~lGNHEfd~g~~~l~~~l~~--------~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~ 172 (552)
T 2z1a_A 105 RLRY-RAMALGNHEFDLGPGPLADFLKG--------ARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLT 172 (552)
T ss_dssp HTTC-CEEECCGGGGTTCHHHHHHHHTT--------CCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEE
T ss_pred hcCC-CccccccccccCCHHHHHHHHhh--------CCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEec
Confidence 3333 488999998642 23333321 12235667876422 122556789999998754
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.012 Score=64.73 Aligned_cols=172 Identities=10% Similarity=0.034 Sum_probs=86.2
Q ss_pred HHHHHhhh--c-CCCc-EEEEecCCCCCChhh----HHHHHHHhcccCCCCccEEEEecCCCChHH---HHHHhhccccc
Q 008885 22 RVQSVNKS--A-GPFD-AVLCVGQFFPDSSEL----LDEFMNYVEGRSEIPIPTYFIGDYGVGAAK---VLLAASKNSAN 90 (550)
Q Consensus 22 kv~~l~~k--~-GpfD-~li~~GDff~~~~~~----~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~---~l~~l~~~~~~ 90 (550)
.++++.+. + | .| ++|.+||++...... .+...+++ ..++.+. ++ ||||.... +.+.+..
T Consensus 110 ~v~~~r~~~~~~g-pd~Lll~~GD~~~gs~~~~~~~g~~~~~~l---n~lg~d~-~~-GNHEfd~G~~~l~~~l~~---- 179 (562)
T 2wdc_A 110 LIRDQKARVEAEG-GKALVLDGGDTWTNSGLSLLTRGEAVVRWQ---NLVGVDH-MV-SHWEWTLGRERVEELLGL---- 179 (562)
T ss_dssp HHHHHHHHHHHTT-CCEEEEECSCCSSSSHHHHHHTTHHHHHHH---HHHTCCE-EC-CSGGGGGCHHHHHHHHHH----
T ss_pred HHHHHHhhhhcCC-CCEEEEeCCCCCCcchhhhhhCCHHHHHHH---HhhCCcE-Ee-cchhcccCHHHHHHHHHh----
Confidence 34444443 3 4 36 899999997642210 11223333 3344554 47 99996421 2222221
Q ss_pred cCcccCCceecCcEEEcC-------CCCeEEEcCeEEEEEeCccCCC---CC----CCCCCC--HHHHHHHH-HhhcCCC
Q 008885 91 QGFKMDGFKVTDNLFWLK-------GSGNFTLHGLSVAYLSGRQSSE---GQ----QFGTYS--QDDVDALR-ALAEEPG 153 (550)
Q Consensus 91 ~~~~~~g~ei~~Nl~~Lg-------~~gv~~i~GlrIa~lgG~~~~~---~~----~~~~~t--e~di~~L~-~l~~~~~ 153 (550)
.+-..++.|+..-. ..-+++++|++|+.+|-..... .. ..+.|. .+.++.+. .+.....
T Consensus 180 ----~~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 255 (562)
T 2wdc_A 180 ----FRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARAEGA 255 (562)
T ss_dssp ----CCSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHHTTC
T ss_pred ----CCCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHHCCC
Confidence 11234566766431 1235578999999998653210 00 011222 23343322 2321122
Q ss_pred CccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHH-hCCCEEEEccCCCccccccccCCCCcceeEEEEcCC
Q 008885 154 IVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAE-IKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAP 232 (550)
Q Consensus 154 ~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~-lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~ 232 (550)
.+=|+|+|.... . + .+++++ -.....++||.|..+... .. ...|-.+..+.
T Consensus 256 d~iIvLsH~g~~-~----d------------------~~la~~~~giDlIlgGHtH~~~~~~-~~----~~~t~vvqag~ 307 (562)
T 2wdc_A 256 NAVVLLSHNGMQ-L----D------------------AALAERIRGIDLILSGHTHDLTPRP-WR----VGKTWIVAGSA 307 (562)
T ss_dssp SEEEEEECSCHH-H----H------------------HHHHTTSSSCCEEEECSSCCCCSSC-EE----ETTEEEEECCS
T ss_pred CEEEEEeCCCCc-c----h------------------HHHHhcCCCCcEEEeCCCCCCCccC-EE----ECCEEEEecCc
Confidence 344788885422 1 0 123333 246799999998766421 11 13577788888
Q ss_pred CCC
Q 008885 233 VGN 235 (550)
Q Consensus 233 ~g~ 235 (550)
+|.
T Consensus 308 ~g~ 310 (562)
T 2wdc_A 308 AGK 310 (562)
T ss_dssp TTC
T ss_pred ccc
Confidence 775
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.038 Score=60.59 Aligned_cols=205 Identities=9% Similarity=-0.072 Sum_probs=105.6
Q ss_pred CCEEEEEcCCCCChH----------------HHHHHHHHHhhhcCCCc-EEEEecCCCCCChhh------HHHHHHHhcc
Q 008885 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFD-AVLCVGQFFPDSSEL------LDEFMNYVEG 59 (550)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD-~li~~GDff~~~~~~------~~~~~~~l~g 59 (550)
.++||.++|+||++. .+...++++.++.++ | ++|-+||++....-. -+...+.+
T Consensus 15 ~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~-~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~l-- 91 (557)
T 3c9f_A 15 DINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQ-DLLLIDSGDRHDGNGLSDITSPNGLKSTPIF-- 91 (557)
T ss_dssp SEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTC-EEEEEECSCCCSSCHHHHSSSSTTTTTHHHH--
T ss_pred EEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCC-CEEEEecCCCCCCccchhhcccCCHHHHHHH--
Confidence 478999999999753 333444443323444 5 679999997532100 00122333
Q ss_pred cCCCCccEEEEecCCCChHH------HHHHhhccccccCcccCCceecCcEEEcC----------CCCeEEE--cCeEEE
Q 008885 60 RSEIPIPTYFIGDYGVGAAK------VLLAASKNSANQGFKMDGFKVTDNLFWLK----------GSGNFTL--HGLSVA 121 (550)
Q Consensus 60 ~~~~p~ptyfv~GNhe~~~~------~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg----------~~gv~~i--~GlrIa 121 (550)
..+++. +++.||||.... +.+.+.. .+...++.|+.+.. ...++++ +|+||+
T Consensus 92 -n~lg~D-a~tlGNHEfD~G~~~l~~~~~~l~~--------a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIg 161 (557)
T 3c9f_A 92 -IKQDYD-LLTIGNHELYLWENSKQEYETVVNH--------FQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVM 161 (557)
T ss_dssp -TTSCCS-EECCCGGGSSSHHHHHHHHHHHHHH--------TTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEE
T ss_pred -HhcCCC-EEeecchhcccchHHHHHHHHHHHh--------CCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEE
Confidence 344444 667799997532 2222221 12235677877532 2345677 899999
Q ss_pred EEeCccCCCCC-CCCCC-CHHH-HH--HHHHhhcCCCCcc--EEEeCCCCccccccccccccccccCCCCCCcHHHHHHH
Q 008885 122 YLSGRQSSEGQ-QFGTY-SQDD-VD--ALRALAEEPGIVD--LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELV 194 (550)
Q Consensus 122 ~lgG~~~~~~~-~~~~~-te~d-i~--~L~~l~~~~~~vD--ILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~ 194 (550)
.+|=....... ....| ...+ +. .+.++. ..++| |+|+|..-.+-. + .. ......++
T Consensus 162 iiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~--~~~~D~IIvL~H~G~~~~~---d-----------~~-~~~~~~lA 224 (557)
T 3c9f_A 162 AFGFLFDFKRFNSGTRVTPMAETIHEPWFQEAL--KHEVDLIIIVGHTPISHNW---G-----------EF-YQVHQYLR 224 (557)
T ss_dssp EEECCCCCCCCCTTEEECCHHHHTTSHHHHHHT--TSCCSEEEEECSSCCCTTT---C-----------HH-HHHHHHHH
T ss_pred EEEeecCCCCCCCCcEECCHHHHHHHHHHHHHH--hcCCCEEEEecccCccccC---c-----------cc-cHHHHHHH
Confidence 99865431111 01122 2222 12 233322 23566 567774321110 0 01 22334455
Q ss_pred HHhCCC---EEEEccCCCccccccccCCCCcceeEEEEcCCCCCcccceeEEEeccCC
Q 008885 195 AEIKPR---YHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPTP 249 (550)
Q Consensus 195 ~~lkPR---Yhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~~~K~Kw~yAf~i~p 249 (550)
+.+ |- ..+.||.|.... .+|. ..|-.+..|.++. ++--++|+-
T Consensus 225 ~~~-~giDilIlgGHtH~~~~-~~~~-----~~t~ivqaG~~g~-----~lG~l~l~~ 270 (557)
T 3c9f_A 225 QFF-PDTIIQYFGGHSHIRDF-TVFD-----SLSTGLQSGRYCE-----TVGWTSVNL 270 (557)
T ss_dssp HHC-TTSEEEEEECSSCCEEE-EEEE-----TTEEEEEECSTTS-----EEEEEEECC
T ss_pred HhC-CCCCEEEECCCCCCCCc-ceec-----CCeEeeeccchhc-----EEEEEEEEE
Confidence 544 43 478999987643 3342 2466677777764 555555553
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0044 Score=67.83 Aligned_cols=114 Identities=14% Similarity=0.062 Sum_probs=67.9
Q ss_pred CCEEEEEcCCCCCh--------------------HHHHHHHHHHhhhcCCCcEEEEecCCCCCChhh----HHHHHHHhc
Q 008885 3 PPRILLCGDVLGRL--------------------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL----LDEFMNYVE 58 (550)
Q Consensus 3 ~~KILv~GDvhG~~--------------------~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~----~~~~~~~l~ 58 (550)
+++||.++|+||++ .++...++++.+++ |-+++|.+||++...... ...+.+.+
T Consensus 25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~-~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l- 102 (546)
T 4h2g_A 25 ELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAE-PNVLLLDAGDQYQGTIWFTVYKGAEVAHFM- 102 (546)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHC-SSEEEEECSCCSSSSHHHHHHTTHHHHHHH-
T ss_pred EEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhC-CCEEEEECCccCCCchhhhhhCChHHHHHH-
Confidence 36899999999864 45566666666555 458999999997643210 01222333
Q ss_pred ccCCCCccEEEEecCCCChHHHHHHhh-ccccccCcccCCceecCcEEEcC-----------CCCeEEEcCeEEEEEeCc
Q 008885 59 GRSEIPIPTYFIGDYGVGAAKVLLAAS-KNSANQGFKMDGFKVTDNLFWLK-----------GSGNFTLHGLSVAYLSGR 126 (550)
Q Consensus 59 g~~~~p~ptyfv~GNhe~~~~~l~~l~-~~~~~~~~~~~g~ei~~Nl~~Lg-----------~~gv~~i~GlrIa~lgG~ 126 (550)
..+.+. +++.||||.... .+.+. .... ..+-..++.|+...+ ..-+++.+|+||+.+|=.
T Consensus 103 --n~lg~d-~~~~GNHEfd~g-~~~l~~~~~~----~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~ 174 (546)
T 4h2g_A 103 --NALRYD-AMALGNHEFDNG-VEGLIEPLLK----EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYT 174 (546)
T ss_dssp --HHHTCS-EEECCGGGGTTH-HHHHHTTTTT----TCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEEE
T ss_pred --HhcCCc-EEeccCcccccC-HHHHHHHHHh----hcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEec
Confidence 223333 788999985432 12221 1000 012246788887543 234557899999999854
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0051 Score=61.61 Aligned_cols=73 Identities=16% Similarity=0.195 Sum_probs=43.2
Q ss_pred CCCCEEEEEcCCCCCh--HHHHHHHHHHhhhcCCCcEEEEecCCCCCC-hhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 1 MSPPRILLCGDVLGRL--NQLFKRVQSVNKSAGPFDAVLCVGQFFPDS-SELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 1 M~~~KILv~GDvhG~~--~~l~~kv~~l~~k~GpfD~li~~GDff~~~-~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
|.+||||++||+||+- ..+...+.++.++.. .|++|+-||-+... .-.......+ ..+++- ..+.|||+-+
T Consensus 2 ~~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~-~d~vi~Ngen~~gG~g~~~~~~~~l----n~~G~D-a~TlGNHefD 75 (281)
T 1t71_A 2 MNSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQ-ADLVIVNAENTTHGKGLSLKHYEFL----KEAGVN-YITMGNHTWF 75 (281)
T ss_dssp CCCCEEEEECEEBHHHHHHHHHTTHHHHHHHHT-CSEEEEECTBTTTTSSCCHHHHHHH----HHHTCC-EEECCTTTTC
T ss_pred cceEEEEEECCcCChHHHHHHHHHHHHHHHhcC-CCEEEEcCCCCCCCCCcCHHHHHHH----HhcCCC-EEEEccCccc
Confidence 6689999999999974 344555666655543 58999998863211 1011122222 222233 3456899976
Q ss_pred HH
Q 008885 78 AK 79 (550)
Q Consensus 78 ~~ 79 (550)
..
T Consensus 76 ~g 77 (281)
T 1t71_A 76 QK 77 (281)
T ss_dssp CG
T ss_pred CC
Confidence 43
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.073 Score=54.60 Aligned_cols=112 Identities=10% Similarity=-0.070 Sum_probs=63.9
Q ss_pred CCEEEEEcCCCCChH----------------HHHHHHHHHhhhcCCCcEEEEecCCCCCChhhH------------HHHH
Q 008885 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELL------------DEFM 54 (550)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~------------~~~~ 54 (550)
+++||.+.|+||++. ++...++++.++. +-.++|-+||++....-.. ....
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~-~n~llld~GD~~qGs~~~~~~~~~~~~~g~~~p~~ 86 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEV-KNSVLVDNGDVIQGSPLGDYMAAKGLKEGDVHPVY 86 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTC-SCEEEEECSCCSSSSHHHHHHHHHCCCTTCCCHHH
T ss_pred eEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhC-CCEEEEECCCCCCCchhHHhhhhcccccccchHHH
Confidence 478999999999863 3444455554444 4468899999975321100 0112
Q ss_pred HHhcccCCCCccEEEEecCCCChH--HHH-HHhhccccccCcccCCceecCcEEEc-------CCCCeEEE-----c---
Q 008885 55 NYVEGRSEIPIPTYFIGDYGVGAA--KVL-LAASKNSANQGFKMDGFKVTDNLFWL-------KGSGNFTL-----H--- 116 (550)
Q Consensus 55 ~~l~g~~~~p~ptyfv~GNhe~~~--~~l-~~l~~~~~~~~~~~~g~ei~~Nl~~L-------g~~gv~~i-----~--- 116 (550)
+.+ ..+++- +++.||||... +.+ +.+.. .+-..++.|++.- ....|++. +
T Consensus 87 ~~m---n~lg~D-~~t~GNHEfd~G~~~l~~~~~~--------a~fp~l~aNv~~~~~g~~~~~py~I~~~~v~~~~G~~ 154 (339)
T 3jyf_A 87 KAM---NTLNYA-VGNLGNHEFNYGLDFLHKALAG--------AKFPYVNANIIDAKTGKPMFTPYLIQDTRVVDSDGQI 154 (339)
T ss_dssp HHH---TTSCCS-EEECCGGGGTTCHHHHHHHHHT--------CSSCEECSSEEETTTSSBSSCCEEEEEEEEECTTSCE
T ss_pred HHH---HhcCCC-EEecchhhhhccHHHHHHHHHh--------cCCceeeeeeeecCCCCcccCCeEEEEEEeeccCCCc
Confidence 222 334433 56789999542 223 32321 1234688888762 12234444 4
Q ss_pred -CeEEEEEeCcc
Q 008885 117 -GLSVAYLSGRQ 127 (550)
Q Consensus 117 -GlrIa~lgG~~ 127 (550)
|+||+.+|=..
T Consensus 155 ~gvkIgviG~~~ 166 (339)
T 3jyf_A 155 HTLRIGYIGFVP 166 (339)
T ss_dssp EEEEEEEEEECC
T ss_pred CCeEEEEEeccc
Confidence 69999999753
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.042 Score=56.45 Aligned_cols=112 Identities=11% Similarity=-0.020 Sum_probs=63.3
Q ss_pred CCEEEEEcCCCCChH----------------HHHHHHHHHhhhcCCCcEEEEecCCCCCChh----hH------------
Q 008885 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----LL------------ 50 (550)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~li~~GDff~~~~~----~~------------ 50 (550)
+++||.++|+||++. ++...++++.+++ +-.++|-+||++....- ..
T Consensus 11 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~-~~~llld~GD~~qGs~~~~~~~~~~~~~g~~~g~~ 89 (341)
T 3gve_A 11 HLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQN-PNTLLVDNGDLIQGNPLGEYAVKYQKDDIISGTKT 89 (341)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHC-SSEEEEECSCCSCSSHHHHHHHHHHHHHHHHTSSC
T ss_pred EEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcC-CCEEEEecCccCCCcHHHHHhhhcccccccccccc
Confidence 368999999999863 4444555555444 44688899999753211 00
Q ss_pred HHHHHHhcccCCCCccEEEEecCCCChH--HHH-HHhhccccccCcccCCceecCcEEE------cCCCCeEEE-----c
Q 008885 51 DEFMNYVEGRSEIPIPTYFIGDYGVGAA--KVL-LAASKNSANQGFKMDGFKVTDNLFW------LKGSGNFTL-----H 116 (550)
Q Consensus 51 ~~~~~~l~g~~~~p~ptyfv~GNhe~~~--~~l-~~l~~~~~~~~~~~~g~ei~~Nl~~------Lg~~gv~~i-----~ 116 (550)
....+.+ ..+++- +++.||||... +.+ +.+.. ..-..++.|++. +....|++. +
T Consensus 90 ~~~~~~l---n~lg~D-a~tlGNHEfd~G~~~L~~~~~~--------~~fp~l~aNv~~~~g~~~~~py~I~~~~~~~~~ 157 (341)
T 3gve_A 90 HPIISVM---NALKYD-AGTLGNHEFNYGLDFLDGTIKG--------ADFPIVNANVKTTSGENRYTPYVINEKTLIDEN 157 (341)
T ss_dssp CHHHHHH---HHTTCC-BEECCGGGGTTCHHHHHHHHHT--------CSSCEECSSEECTTSCBSSCCEEEEEEEEECTT
T ss_pred cHHHHHH---HhhCCC-eeeccchhhccCHHHHHHHHHh--------cCCCEEEEeeECCCCCCccCCeEEEEEeeeccC
Confidence 0112222 223333 56789999542 223 32321 123467888864 222234454 3
Q ss_pred ----CeEEEEEeCcc
Q 008885 117 ----GLSVAYLSGRQ 127 (550)
Q Consensus 117 ----GlrIa~lgG~~ 127 (550)
|+||+.+|=..
T Consensus 158 G~~~gvkIgviG~t~ 172 (341)
T 3gve_A 158 GNEQKVKVGYIGFVP 172 (341)
T ss_dssp SCEEEEEEEEEEECC
T ss_pred CCcCCeEEEEEEecc
Confidence 69999999653
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.06 E-value=0.1 Score=56.67 Aligned_cols=113 Identities=15% Similarity=0.102 Sum_probs=66.4
Q ss_pred CCEEEEEcCCCCChH--------------------HHHHHHHHHhhhcCCCcEEEEecCCCCCChhh----HHHHHHHhc
Q 008885 3 PPRILLCGDVLGRLN--------------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL----LDEFMNYVE 58 (550)
Q Consensus 3 ~~KILv~GDvhG~~~--------------------~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~----~~~~~~~l~ 58 (550)
++.||.+.|+||+|. ++...++++.+++ |--++|-+||++....-. -+..-++++
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~-~n~llldaGD~~qGs~~~~~~~g~~~i~~mN 81 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAE-PNVLLLDAGDQYQGTIWFTVYKGAEVAHFMN 81 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHC-SSEEEEECSCCSCSSHHHHHHTTHHHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhC-cCeEEEEeCCcccchHHHHHhCChHHHHHHh
Confidence 368999999998763 4555566555544 445788899997642110 001112221
Q ss_pred ccCCCCccEEEEecCCCChHH---HHHHhhccccccCcccCCceecCcEEEcC-----------CCCeEEEcCeEEEEEe
Q 008885 59 GRSEIPIPTYFIGDYGVGAAK---VLLAASKNSANQGFKMDGFKVTDNLFWLK-----------GSGNFTLHGLSVAYLS 124 (550)
Q Consensus 59 g~~~~p~ptyfv~GNhe~~~~---~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg-----------~~gv~~i~GlrIa~lg 124 (550)
.+++ -+.+.||||.... +++.+... .....|+.|++.-+ ..-|++.+|+||+.+|
T Consensus 82 ---~lgy-Da~~lGNHEFd~G~~~l~~~~~~~-------a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviG 150 (530)
T 4h1s_A 82 ---ALRY-DAMALGNHEFDNGVEGLIEPLLKE-------AKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVG 150 (530)
T ss_dssp ---HTTC-CEEECCGGGGTTTTHHHHTTTTTT-------CSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEE
T ss_pred ---ccCC-CEEEEchhhhccCHHHHHHHHHhh-------CCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeecc
Confidence 2222 3678899986432 22222111 12347899997643 1245678999999999
Q ss_pred Ccc
Q 008885 125 GRQ 127 (550)
Q Consensus 125 G~~ 127 (550)
-..
T Consensus 151 ltt 153 (530)
T 4h1s_A 151 YTS 153 (530)
T ss_dssp EEC
T ss_pred ccc
Confidence 653
|
| >1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A | Back alignment and structure |
|---|
Probab=94.43 E-value=0.016 Score=46.11 Aligned_cols=56 Identities=30% Similarity=0.746 Sum_probs=22.1
Q ss_pred cceeeeccCCCCCCCcccccCCchhhhh------hccccchhhhcccccCCCCCccccCCcC
Q 008885 315 MCFKFIYSGSCPRGEKCNFRHDTDAREQ------CLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (550)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (550)
+|..|...|.|+.|+.|+|.|+...... +-...|..|.+.|.|..|.+|++.|..+
T Consensus 14 ~C~~f~~~G~C~~G~~C~f~H~~~e~~~~~~~~~~k~~~C~~f~~~G~C~~G~~C~f~H~~~ 75 (77)
T 1m9o_A 14 LCRTYSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFKLQGRCPYGSRCHFIHNPT 75 (77)
T ss_dssp CCSGGGGTSCCTTTTTCSSCSSSCCGGGTC--------------------------------
T ss_pred hCHHhhhCCCcCCCCCccCCCCChhhccccccccccCCcccchhhCcCCCCcCcCCCCCCCC
Confidence 6777777889999999999999754332 2356898899999999999999998764
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=93.47 E-value=0.21 Score=48.96 Aligned_cols=105 Identities=17% Similarity=0.167 Sum_probs=55.6
Q ss_pred CEEEEEcCCCCC--hHHHHHHHHHHhhhcCCCcEEEEecC-CC-CCChhhHHHHHHHhcccCCCCccEEEEecCCCChHH
Q 008885 4 PRILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQ-FF-PDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK 79 (550)
Q Consensus 4 ~KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~li~~GD-ff-~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~ 79 (550)
||||++||+=|+ ...+.+.+.++.+++ |++|+-|. .+ +.... ......+ .++++-. ++.|||+-+..
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~---d~vi~ngen~~~G~g~~-~~~~~~l----~~~G~D~-~T~GNHefD~~ 71 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY---DLVIANGENAARGKGLD-RRSYRLL----REAGVDL-VSLGNHAWDHK 71 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC---SEEEEECTTTTTTSSCC-HHHHHHH----HHHTCCE-EECCTTTTSCT
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC---CEEEEeCCCccCCCCcC-HHHHHHH----HhCCCCE-EEeccEeeECc
Confidence 799999999886 455666677766554 77777655 43 22111 1223333 2333444 46799996643
Q ss_pred -HHHHhhcc--ccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeC
Q 008885 80 -VLLAASKN--SANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSG 125 (550)
Q Consensus 80 -~l~~l~~~--~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG 125 (550)
++..+... -...+++. + .+ ..+..|++.+|.+|+.+|-
T Consensus 72 ~l~~~l~~~~~vrpaN~~~-~---~p----g~~~~i~~~~G~kIgVi~l 112 (252)
T 2z06_A 72 EVYALLESEPVVRPLNYPP-G---TP----GKGFWRLEVGGESLLFVQV 112 (252)
T ss_dssp THHHHHHHSSEECCTTSCS-S---CS----SCSEEEEEETTEEEEEEEE
T ss_pred hHHHHhccCCceEeecCCC-C---CC----CCCeEEEEECCEEEEEEEc
Confidence 33323210 00001111 0 11 1123466789999998874
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=93.14 E-value=0.15 Score=50.16 Aligned_cols=106 Identities=15% Similarity=0.076 Sum_probs=55.3
Q ss_pred CEEEEEcCCCCCh--HHHHHHHHHHhhhcCCCcEEEEecCCC-CC-ChhhHHHHHHHhcccCCCCccEEEEecCCCChHH
Q 008885 4 PRILLCGDVLGRL--NQLFKRVQSVNKSAGPFDAVLCVGQFF-PD-SSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK 79 (550)
Q Consensus 4 ~KILv~GDvhG~~--~~l~~kv~~l~~k~GpfD~li~~GDff-~~-~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~ 79 (550)
||||++||+=|+. ..+.+.+.++.++. |++|+-|+-. .. ... ......+ ..+++- .++.|||+-+..
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~---d~vi~nge~~~~G~g~~-~~~~~~l----~~~G~D-a~TlGNHefD~~ 71 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF---DFVIVNMENSAGGFGMH-RDAARGA----LEAGAG-CLTLGNHAWHHK 71 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC---SEEEEECTBTTTTSSCC-HHHHHHH----HHHTCS-EEECCTTTTSST
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC---CEEEECCCCccCCcCCC-HHHHHHH----HhCCCC-EEEeccccccCc
Confidence 7999999998864 34445555555444 8888887753 21 111 1222222 223333 345589997643
Q ss_pred -HHHHhhccccccCcccCCceecCcEE---EcCC-CCeEEEcCeEEEEEeC
Q 008885 80 -VLLAASKNSANQGFKMDGFKVTDNLF---WLKG-SGNFTLHGLSVAYLSG 125 (550)
Q Consensus 80 -~l~~l~~~~~~~~~~~~g~ei~~Nl~---~Lg~-~gv~~i~GlrIa~lgG 125 (550)
+++.+.... | -.-.+-|+- ..++ ..|++.+|++|+.+|-
T Consensus 72 ~l~~~l~~~~----~---~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl 115 (255)
T 1t70_A 72 DIYPMLSEDT----Y---PIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNL 115 (255)
T ss_dssp THHHHHHTTC----S---CEECCSCCCCTTCSSCSEEEEECSSSEEEEEEE
T ss_pred hHHHHHhhCC----C---cEEEEeccCCCCCCCCCeEEEEECCEEEEEEEe
Confidence 333332110 0 001123321 1122 2355778999998874
|
| >3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A* | Back alignment and structure |
|---|
Probab=91.50 E-value=0.59 Score=46.80 Aligned_cols=85 Identities=13% Similarity=0.093 Sum_probs=55.9
Q ss_pred cceEEEECCE---EEEEecC-----CCCCCCeEEEEeccc-cCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCC---c-eE
Q 008885 402 SHLIVSVGEY---YYCALPK-----GPLVEDHVLVIPVEH-VPNTISTSPECEKELGRFQNSLMMYYKN-QGK---E-AV 467 (550)
Q Consensus 402 ~hliis~g~~---~yl~l~k-----gpl~~gH~lIiP~~H-~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~~~---~-~v 467 (550)
...|++.+++ -||++|. .|+..=|+|+||.+| +.|+.+|..+-..=+++++....+...+ +|. . .+
T Consensus 150 ~e~ilyeD~d~~~gFvllpDlkWd~~~~~~lhlLaI~~~~~I~SlrdL~~~HlpLL~~M~~~~~~~i~~~y~~~~~~~rl 229 (301)
T 3bl9_A 150 ADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRV 229 (301)
T ss_dssp GGGCCEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred cccEEEecCCCCcCEEEeccCccCCCcccccEEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeEE
Confidence 3345665554 2777773 389999999999998 9999999887655555555555555443 231 2 23
Q ss_pred EEeecCCCcCeEEEEEeecC
Q 008885 468 FFEWLSKRGTHANLQAVPIP 487 (550)
Q Consensus 468 ~~E~~~~~~~H~hi~~vPvp 487 (550)
+|-+. -...|+|+|+|-+-
T Consensus 230 gfHy~-PS~yHLHlHvis~~ 248 (301)
T 3bl9_A 230 YLHYL-PSYYHLHVHFTALG 248 (301)
T ss_dssp EEESS-CSSSSCEEEEEETT
T ss_pred EecCC-CCcceEEEEEEecC
Confidence 34422 24579999999875
|
| >1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B* | Back alignment and structure |
|---|
Probab=90.59 E-value=0.65 Score=47.23 Aligned_cols=83 Identities=13% Similarity=0.085 Sum_probs=54.8
Q ss_pred eEEEECCE---EEEEecC-----CCCCCCeEEEEeccc-cCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCC---c-eEEE
Q 008885 404 LIVSVGEY---YYCALPK-----GPLVEDHVLVIPVEH-VPNTISTSPECEKELGRFQNSLMMYYKN-QGK---E-AVFF 469 (550)
Q Consensus 404 liis~g~~---~yl~l~k-----gpl~~gH~lIiP~~H-~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~~~---~-~v~~ 469 (550)
.|++.+++ =||++|. .|+..=|+|+||.+| +.|+.+|..+-..=|.+++....++... +|. . .++|
T Consensus 199 ~vlyeD~d~~~gFvllpDlKWd~~~~~~lhlLaI~~~~dI~SlRdL~~~HlpLL~~M~~~~~~ii~~~yg~~~~~lRlgf 278 (350)
T 1vlr_A 199 RIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKRYQVTGDRLRVYL 278 (350)
T ss_dssp CCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred cEEEecCCCCCCeEEeccCccCCCccccceEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeEEEe
Confidence 45555544 2777773 389999999999998 9999999887555555555555555443 231 2 2344
Q ss_pred eecCCCcCeEEEEEeecC
Q 008885 470 EWLSKRGTHANLQAVPIP 487 (550)
Q Consensus 470 E~~~~~~~H~hi~~vPvp 487 (550)
=+. -...|+|+|+|-+-
T Consensus 279 Hy~-PS~yHLHlHvis~~ 295 (350)
T 1vlr_A 279 HYL-PSYYHLHVHFTALG 295 (350)
T ss_dssp ESS-CSSSSCEEEEEETT
T ss_pred cCC-CCcceEEEEEEecc
Confidence 422 24579999999875
|
| >3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A | Back alignment and structure |
|---|
Probab=88.30 E-value=0.24 Score=38.63 Aligned_cols=53 Identities=36% Similarity=0.921 Sum_probs=40.3
Q ss_pred cceeeeccCCCCCCC-cccccCCchh----hhhhccccchhhhcccccCCCCCccccCCcC
Q 008885 315 MCFKFIYSGSCPRGE-KCNFRHDTDA----REQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (550)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (550)
+|..| ..|.|.+|+ .|+|.|.... .......+|.+|.. |.|..| +|++.|..+
T Consensus 8 vC~~f-~~G~C~rg~~~C~f~H~~~~~~~~~~~~~~~vC~~flk-G~C~r~-~C~y~H~~~ 65 (70)
T 3d2q_A 8 VCREY-QRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIK-GRCSRE-KCKYFHPPA 65 (70)
T ss_dssp BCHHH-HTTCCSSCTTTCSSBCCCTTSCCBTTTTEEEBCHHHHT-TCCCCT-TCCSBCCCH
T ss_pred hCHHH-hcCCCCCCCCCCCCccCcccccccccCCcceeccccCc-CCCCCC-CcCeeCCHH
Confidence 68778 679999999 5999998643 23344567888875 889888 898888653
|
| >2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1 | Back alignment and structure |
|---|
Probab=86.87 E-value=0.47 Score=39.61 Aligned_cols=47 Identities=28% Similarity=0.730 Sum_probs=40.0
Q ss_pred cceeeeccCCCCCCCcccccCCchhhhhhccccchhhhcccccCCCCCccccCCcC
Q 008885 315 MCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (550)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (550)
+|.-| ..|.|..|+.|+|.|+ ..+|..|...|.|..|.+|++.|...
T Consensus 15 lC~~f-~~G~C~~G~~C~f~H~--------~~~C~~f~~~G~C~~G~~C~f~H~~~ 61 (98)
T 2cqe_A 15 LCKFY-ITGFCARAENCPYMHG--------DFPCKLYHTTGNCINGDDCMFSHDPL 61 (98)
T ss_dssp BCTTT-TTTCCSCSTTCSSBSS--------SSBCSHHHHTSCCSSCTTCSSBCCCC
T ss_pred cCccc-ccCcCCCCCCCCCCCC--------CCcCcCcccCCcCCCCCCCcccCCCC
Confidence 67666 4688999999999999 46788888899999999999999854
|
| >1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A* | Back alignment and structure |
|---|
Probab=86.77 E-value=3.6 Score=42.02 Aligned_cols=97 Identities=12% Similarity=0.066 Sum_probs=55.6
Q ss_pred CCCcccCCCCCCCcceEEEECC-EEEEEecCCCCC-C-------------------C-eEEEE-eccccCCCCCCCHHHH
Q 008885 389 KECWFCLSSPSVESHLIVSVGE-YYYCALPKGPLV-E-------------------D-HVLVI-PVEHVPNTISTSPECE 445 (550)
Q Consensus 389 ~~C~FC~~~~~~~~hliis~g~-~~yl~l~kgpl~-~-------------------g-H~lIi-P~~H~~s~~~l~~~~~ 445 (550)
..|.||-.|...... ..-+- .++++-++.|.. + | |-+|| .-.|..++.+++.+..
T Consensus 50 ~~CpfCpg~~~~t~~--~~p~~~~~~v~~N~fpal~~~~~~~~~~~~~l~~~~~~~G~~~VIi~sp~H~~~l~~l~~~~~ 127 (348)
T 1gup_A 50 PDCFLCAGNVRVTGD--KNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPELSVAAL 127 (348)
T ss_dssp TTCTTSTTCBCTTSC--BCCCCSSCEEEECTTCSCCTTCCCCCCCCCSSSCEEECCEEEEEEESCSCTTCCGGGSCHHHH
T ss_pred CCCCCCCCCcccCCC--CCCCCceEEEecCCCceeccCCCCccccCccceecCccceeEEEEEcCCcccCChhhCCHHHH
Confidence 369999887543110 01111 256665666533 1 2 44444 4489999999998776
Q ss_pred HHHHH-HHHHHHHHHhhcCCceEEEeec----CCCcCeEEEEEeecCC
Q 008885 446 KELGR-FQNSLMMYYKNQGKEAVFFEWL----SKRGTHANLQAVPIPT 488 (550)
Q Consensus 446 ~Ei~~-~~~~L~~~~~~~~~~~v~~E~~----~~~~~H~hi~~vPvp~ 488 (550)
.++.. +++.+..+. ..-.-|.+||+- +-...|-|.|++-.|.
T Consensus 128 ~~vi~~~~~r~~~l~-~~~~yV~iF~N~G~~~G~Sl~HpH~Qi~a~~~ 174 (348)
T 1gup_A 128 TEIVKTWQEQTAELG-KTYPWVQVFENKGAAMGCSNPHPGGQIWANSF 174 (348)
T ss_dssp HHHHHHHHHHHHHHH-HHCSEEEEEEEESGGGTCSCCSSEEEEEEESS
T ss_pred HHHHHHHHHHHHHHh-hcCCEEEEecccCCcCCcCCCCCceeEEeccc
Confidence 66654 455555555 333346677721 2224688888876554
|
| >3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.82 E-value=0.55 Score=37.96 Aligned_cols=53 Identities=32% Similarity=0.795 Sum_probs=40.5
Q ss_pred cceeeeccCCCCCCC-cccccCCchhh--hhhccccchhhhcccccCCCCCccccCCcC
Q 008885 315 MCFKFIYSGSCPRGE-KCNFRHDTDAR--EQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (550)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (550)
+|.+|.. |.|.+++ .|+|.|....- ....-.+|.+|. +|.|..+ .|++-|...
T Consensus 11 VCr~Flr-G~C~r~d~~C~f~H~~~~~~~~~~~~~vC~dfl-kG~C~r~-~C~y~H~~~ 66 (83)
T 3d2n_A 11 VCREFQR-GTCSRPDTECKFAHPSKSCQVENGRVIACFDSL-KGRCSRE-NCKYLHPPP 66 (83)
T ss_dssp BCTTGGG-TCCCSCTTTCSSBCCCTTCCEETTEEECCHHHH-TTCCCCS-SCSSCCCCH
T ss_pred hcHHHhc-CCCCCCCCCCCCcCCCccccccCCceeehhHhh-hccccCC-CcceeCChH
Confidence 7888888 9999997 99999997531 122346788884 6888888 888888754
|
| >2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.60 E-value=0.65 Score=36.84 Aligned_cols=52 Identities=27% Similarity=0.713 Sum_probs=41.3
Q ss_pred cceeeeccCCCCCCCcccccCCchhhhhhccccchhhhcccccCCCCCccccCCcCC
Q 008885 315 MCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQN 371 (550)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 371 (550)
+|.-|.+ |.|..|+.|+|.|+..... ..+|..|...|.|. |.+|++.|....
T Consensus 12 ~C~~fl~-G~C~~G~~C~fsH~~~~~~---~~~C~~f~~~G~C~-~~~C~f~H~~~~ 63 (77)
T 2d9n_A 12 VCKHWLR-GLCKKGDQCEFLHEYDMTK---MPECYFYSKFGECS-NKECPFLHIDPE 63 (77)
T ss_dssp BCHHHHT-TCCSCTTSSSSBCSCCTTT---SCBCHHHHHTCCCC-CSSCSSBCCCTT
T ss_pred eCHhHcc-CcCCCCCCCCCccccccCc---CCCCcccCCCCccC-CCCeeccCCCcc
Confidence 6777776 9999999999999975432 23687777768998 889999998753
|
| >2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.88 E-value=0.68 Score=37.93 Aligned_cols=53 Identities=32% Similarity=0.803 Sum_probs=40.7
Q ss_pred cceeeeccCCCCCCC-cccccCCchh--hhhhccccchhhhcccccCCCCCccccCCcC
Q 008885 315 MCFKFIYSGSCPRGE-KCNFRHDTDA--REQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (550)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (550)
+|.+|.+ |.|.+++ .|+|.|.... .++..-.+|.+|. +|.|..+ .|++-|...
T Consensus 19 VCrdFlr-G~C~r~d~~CrfsH~~~~~~v~~~~~~vC~dfl-kG~C~r~-~Cky~H~~~ 74 (89)
T 2rpp_A 19 VCRQFQR-GTCSRSDEECKFAHPPKSCQVENGRVIACFDSL-KGRCSRE-NCKYLHPPT 74 (89)
T ss_dssp BCHHHHH-TCCCCCTTTSSSBCCCSSSCCBTTBEEBCHHHH-HTCCCCT-TCCSBCCCH
T ss_pred hchHHhc-CCCCCCCCCCCCcCCCccccccCCceeeehhhh-hCcCCCC-CcceecCHH
Confidence 7888888 9999998 9999998753 1223356888985 7888877 788887654
|
| >2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.33 E-value=0.42 Score=39.91 Aligned_cols=54 Identities=37% Similarity=0.902 Sum_probs=42.5
Q ss_pred CcceeeeccCCCCCCC-cccccCCchhh----hhhccccchhhhcccccCCCCCccccCCcC
Q 008885 314 KMCFKFIYSGSCPRGE-KCNFRHDTDAR----EQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (550)
Q Consensus 314 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (550)
.+|..|.+ |.|.+|+ .|+|.|..... .+....+|.+|+. |.|..| +|++.|...
T Consensus 21 ~VCr~Flr-G~C~rgd~~C~FsH~~~~~~~~~~~~~~~vC~~flk-G~C~r~-~C~y~H~~~ 79 (98)
T 2e5s_A 21 EVCREFQR-GNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIK-GRCMRE-KCKYFHPPA 79 (98)
T ss_dssp EBCSHHHH-TCCSSHHHHCSSBCCSSCCSCCTTTCEEEBCHHHHH-TCCCCT-TCCSBCCCH
T ss_pred hhhHHHhc-CcCCCCCCCCCCcCCchhccccccCCccccchhhcc-CCCCCC-CcCccCChH
Confidence 38888887 9999999 79999997532 2344568888864 899988 999998764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 550 | ||||
| d1guqa2 | 171 | d.13.1.2 (A:178-348) Galactose-1-phosphate uridyly | 2e-05 | |
| d1rgoa2 | 34 | g.66.1.1 (A:187-220) Butyrate response factor 2 (T | 7e-05 | |
| d1rgoa1 | 36 | g.66.1.1 (A:151-186) Butyrate response factor 2 (T | 8e-05 | |
| d1m9oa_ | 40 | g.66.1.1 (A:) Tristetraproline (ttp, tis11, nup475 | 1e-04 | |
| d1z84a2 | 156 | d.13.1.2 (A:196-351) Galactose-1-phosphate uridyly | 1e-04 | |
| d1xqua_ | 113 | d.13.1.1 (A:) Putative hydrolase {Clostridium ther | 0.004 |
| >d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: Hexose-1-phosphate uridylyltransferase domain: Galactose-1-phosphate uridylyltransferase species: Escherichia coli [TaxId: 562]
Score = 43.1 bits (101), Expect = 2e-05
Identities = 15/102 (14%), Positives = 30/102 (29%), Gaps = 8/102 (7%)
Query: 372 DDSQRTHRSENASANRSKECWFC--LSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVI 429
D Q+ + +E K + + V E++ +P L++
Sbjct: 6 DRLQKEYFAEQ------KSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLL 59
Query: 430 PVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEW 471
P HV + +L L Y N + + +
Sbjct: 60 PKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSM 101
|
| >d1rgoa2 g.66.1.1 (A:187-220) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]} Length = 34 | Back information, alignment and structure |
|---|
class: Small proteins fold: CCCH zinc finger superfamily: CCCH zinc finger family: CCCH zinc finger domain: Butyrate response factor 2 (Tis11D) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.1 bits (89), Expect = 7e-05
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRHDTD 338
++C F G CP G +C+F H+ D
Sbjct: 9 ELCRTFHTIGFCPYGPRCHFIHNAD 33
|
| >d1rgoa1 g.66.1.1 (A:151-186) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]} Length = 36 | Back information, alignment and structure |
|---|
class: Small proteins fold: CCCH zinc finger superfamily: CCCH zinc finger family: CCCH zinc finger domain: Butyrate response factor 2 (Tis11D) species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.8 bits (88), Expect = 8e-05
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGV 347
++C F SG+C GEKC F H LR +
Sbjct: 7 ELCRPFEESGTCKYGEKCQFAHGFHE----LRSL 36
|
| >d1m9oa_ g.66.1.1 (A:) Tristetraproline (ttp, tis11, nup475) {Mouse (Mus musculus) [TaxId: 10090]} Length = 40 | Back information, alignment and structure |
|---|
class: Small proteins fold: CCCH zinc finger superfamily: CCCH zinc finger family: CCCH zinc finger domain: Tristetraproline (ttp, tis11, nup475) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 37.4 bits (87), Expect = 1e-04
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRHDTD 338
++C + SG C G KC F H
Sbjct: 10 ELCRTYSESGRCRYGAKCQFAHGLG 34
|
| >d1z84a2 d.13.1.2 (A:196-351) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: Hexose-1-phosphate uridylyltransferase domain: Galactose-1-phosphate uridylyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 40.1 bits (93), Expect = 1e-04
Identities = 12/99 (12%), Positives = 29/99 (29%), Gaps = 9/99 (9%)
Query: 373 DSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVE 432
D + + E +C C + H ++ ++ P + +IP +
Sbjct: 9 DGTKDYFEET------GKCCLC---EAKSKHFVIDESSHFVSVAPFAATYPFEIWIIPKD 59
Query: 433 HVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEW 471
H + +LG ++ Q + +
Sbjct: 60 HSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPYNYM 98
|
| >d1xqua_ d.13.1.1 (A:) Putative hydrolase {Clostridium thermocellum [TaxId: 1515]} Length = 113 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: Putative hydrolase species: Clostridium thermocellum [TaxId: 1515]
Score = 35.2 bits (80), Expect = 0.004
Identities = 20/96 (20%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Query: 390 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELG 449
C FC I E P HVL+IP EH+ N + + L
Sbjct: 3 NCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILI 62
Query: 450 RFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQAVP 485
+ ++ G + ++ G A Q V
Sbjct: 63 DIHKAANKVAEDLGIAEKGYRLITNCGVAAG-QTVF 97
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 550 | |||
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.79 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.73 | |
| d1y23a_ | 139 | Hit {Bacillus subtilis [TaxId: 1423]} | 99.61 | |
| d2oika1 | 139 | Histidine triad protein Mfla2506 {Methylobacillus | 99.57 | |
| d1kpfa_ | 111 | Protein kinase C inhibitor-1, PKCI-1 {Human (Homo | 99.56 | |
| d1xqua_ | 113 | Putative hydrolase {Clostridium thermocellum [TaxI | 99.55 | |
| d1emsa1 | 160 | NIT-FHIT fusion protein, C-terminal domain {Nemato | 99.48 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.39 | |
| d1fita_ | 146 | FHIT (fragile histidine triad protein) {Human (Hom | 99.35 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.31 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.25 | |
| d1z84a2 | 156 | Galactose-1-phosphate uridylyltransferase {Thale c | 99.18 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.17 | |
| d1guqa2 | 171 | Galactose-1-phosphate uridylyltransferase {Escheri | 99.14 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.04 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 98.96 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.87 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 98.84 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 98.39 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 98.22 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.15 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 98.06 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 98.01 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 97.83 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.37 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 96.87 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 96.83 | |
| d1vlra1 | 192 | mRNA decapping enzyme DcpS C-terminal domain {Mous | 96.73 | |
| d1z84a1 | 173 | Galactose-1-phosphate uridylyltransferase {Thale c | 96.36 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 96.27 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 95.92 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 95.87 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 95.6 | |
| d1guqa1 | 176 | Galactose-1-phosphate uridylyltransferase {Escheri | 93.28 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 91.8 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 85.71 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 83.87 |
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.79 E-value=1.7e-18 Score=164.03 Aligned_cols=198 Identities=17% Similarity=0.154 Sum_probs=132.2
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHH-
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVL- 81 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l- 81 (550)
+.+||++||+||++++|-+.++.++.+. .|+||++||++..... ..++..++....+..+|+|+|+||||.+....
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~~~--~D~vv~~GDl~~~~~~-~~~~~~~~~~L~~~~~pv~~i~GNHD~~~~~~~ 81 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPDTG--ADAIALIGNLMPKAAK-SRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYL 81 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHT--CSEEEEESCSSCTTCC-HHHHHHHHHHHGGGCSCEEEECCTTSCSHHHHH
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhhcC--CCEEEECCCCCCCCcc-chHHHHhhhhhccccceEEEEecCCCchhhhhh
Confidence 5799999999999998766666665543 6999999999864221 12333333333677899999999999753211
Q ss_pred -HHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCC----CCCCCHHHHHHHHHhh-cCCCCc
Q 008885 82 -LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQ----FGTYSQDDVDALRALA-EEPGIV 155 (550)
Q Consensus 82 -~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~----~~~~te~di~~L~~l~-~~~~~v 155 (550)
..... ......+..+.........+..+.++++........ ......+..+.+.... ......
T Consensus 82 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 150 (228)
T d1uf3a_ 82 REAANV-----------ELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYP 150 (228)
T ss_dssp HHHHHH-----------HHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCSCC
T ss_pred hhhccc-----------ccccccccccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHHHHHHHHHhhccCCc
Confidence 11110 012344445543333345678888888876544332 1223455555555433 334567
Q ss_pred cEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCC
Q 008885 156 DLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 156 DILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~ 235 (550)
+||++|.+|.+-.. ...|+..+.++++..+|+|+++||.|..++ ....|.+++.|.++.
T Consensus 151 ~il~~H~p~~~~~~-------------~~~~~~~~~~~~~~~~~~lvl~GH~H~~~~--------~~g~~~~v~pG~~~~ 209 (228)
T d1uf3a_ 151 KIFLFHTMPYHKGL-------------NEQGSHEVAHLIKTHNPLLVLVAGKGQKHE--------MLGASWVVVPGDLSE 209 (228)
T ss_dssp EEEEESSCBCBTTT-------------BTTSBHHHHHHHHHHCCSEEEECCSSCEEE--------EETTEEEEECCBGGG
T ss_pred eEEEEeeeccCccc-------------cccccHHHHHHHHhcCCcEEEEcccccchh--------ccCCEEEEECCcccc
Confidence 99999999986421 257899999999999999999999886544 234688999998864
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.73 E-value=4.6e-17 Score=156.46 Aligned_cols=204 Identities=13% Similarity=0.093 Sum_probs=130.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChh-------------------------hHHHHHHHhc
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-------------------------LLDEFMNYVE 58 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~-------------------------~~~~~~~~l~ 58 (550)
.|||+++|+|++++.+-+.++.++++ .+|+||++||++..... ..+.+..++.
T Consensus 3 ~ri~~isD~h~~~~~l~~l~~~~~~~--~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~~ 80 (257)
T d2yvta1 3 RKVLAIKNFKERFDLLPKLKGVIAEK--QPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFR 80 (257)
T ss_dssp CEEEEEECCTTCGGGHHHHHHHHHHH--CCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHhhc--CCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccccchhhHHHHHH
Confidence 69999999999998765555555554 37999999999864211 1122333333
Q ss_pred ccCCCCccEEEEecCCCChHHHH--HHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCC-CCC
Q 008885 59 GRSEIPIPTYFIGDYGVGAAKVL--LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQ-QFG 135 (550)
Q Consensus 59 g~~~~p~ptyfv~GNhe~~~~~l--~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~-~~~ 135 (550)
...+.++|+|+|+||||...... ..+. ......++..+....+...+++.|+++++....... ...
T Consensus 81 ~L~~~~~pv~~i~GNHD~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (257)
T d2yvta1 81 EIGELGVKTFVVPGKNDAPLKIFLRAAYE-----------AETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDF 149 (257)
T ss_dssp HHHTTCSEEEEECCTTSCCHHHHHHHHHH-----------TTTTCTTEEECSSEEEEETTTEEEEEECSEEESSCCBSSS
T ss_pred HHHhcCCcEEEEeCCCcchhhHHHHHhcc-----------ccccccccccccceeEEecCCeEEEEeccccCCccccchh
Confidence 33567899999999999653322 2121 111235566666433433478999999987543221 111
Q ss_pred C--CCHHHHHHHHHh-hcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccc
Q 008885 136 T--YSQDDVDALRAL-AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYA 212 (550)
Q Consensus 136 ~--~te~di~~L~~l-~~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~e 212 (550)
. +.+.....+... .......+|++||.+|.+.... . .+.. ....|+..+.++++..+|.|+++||.|..++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~Il~~H~pp~~~~~~-~---~~~~--~~~~g~~~l~~~l~~~~~~~~~~GHiH~~~~ 223 (257)
T d2yvta1 150 VLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFVD-R---TPED--PKHHGSAVVNTIIKSLNPEVAIVGHVGKGHE 223 (257)
T ss_dssp SCEEEHHHHHHHGGGGGGSCCCEEEEEESSCCSCSSTT-C---BTTB--SCCCSCHHHHHHHHHHCCSEEEECSSCCEEE
T ss_pred hhhhhhhHHHHHHHHhhhcccccEEEEEcccccccccc-c---cccc--hhhhhhHHHHHhhhhcCCcEEEEEeecCCeE
Confidence 1 122222223322 2334578899999999875321 1 1111 2468999999999999999999999987554
Q ss_pred cccccCCCCcceeEEEEcCCCC
Q 008885 213 REPYSNVDAVHVTRFLGLAPVG 234 (550)
Q Consensus 213 r~Py~~~~~~~~TRFI~La~~g 234 (550)
....|.+++.|.+.
T Consensus 224 --------~~g~~~~~~pGs~~ 237 (257)
T d2yvta1 224 --------LVGNTIVVNPGEFE 237 (257)
T ss_dssp --------EETTEEEEECCBGG
T ss_pred --------ecCCeEEEECCccc
Confidence 24579999998764
|
| >d1y23a_ d.13.1.1 (A:) Hit {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: Hit species: Bacillus subtilis [TaxId: 1423]
Probab=99.61 E-value=2e-16 Score=141.27 Aligned_cols=99 Identities=18% Similarity=0.220 Sum_probs=78.5
Q ss_pred CCCcccCCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHH----HhhcC
Q 008885 389 KECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMY----YKNQG 463 (550)
Q Consensus 389 ~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~----~~~~~ 463 (550)
++|.||.+. .+.+ ..+|+.++.+++++++.|.++||+||||.+|++++.+|+++++.+|....+.+.++ +...|
T Consensus 1 e~CiFC~I~~~e~p-~~~i~ede~~~af~d~~P~~~GH~LViPk~H~~~~~dL~~~~~~~l~~~~~~~~~~l~~~~~~~g 79 (139)
T d1y23a_ 1 ENCIFCKIIAGDIP-SAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPIG 79 (139)
T ss_dssp CCCHHHHHHHTSSC-CCEEEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHCCSE
T ss_pred CcCccCccccCCCC-ccEEEECCCEEEEecCCCCCCcEEEEEEecccccccccchHHHHHHHHHHHHHHHHHhhhcccCC
Confidence 579999764 3344 45789999999999999999999999999999999999999999888655555544 44456
Q ss_pred CceEEEe--ecCCCcCeEEEEEeecCC
Q 008885 464 KEAVFFE--WLSKRGTHANLQAVPIPT 488 (550)
Q Consensus 464 ~~~v~~E--~~~~~~~H~hi~~vPvp~ 488 (550)
++++++. ...+.++|+|+|+||+..
T Consensus 80 ~~i~~n~g~~agq~v~H~H~HviPR~~ 106 (139)
T d1y23a_ 80 LNTLNNNGEKAGQSVFHYHMHIIPRYG 106 (139)
T ss_dssp EEEEEEESGGGTCCSSSCCEEEEEECS
T ss_pred cEEEeCCCccccEecCEEEEEEEcccc
Confidence 6666554 234557899999999853
|
| >d2oika1 d.13.1.1 (A:6-144) Histidine triad protein Mfla2506 {Methylobacillus flagellatus [TaxId: 405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: Histidine triad protein Mfla2506 species: Methylobacillus flagellatus [TaxId: 405]
Probab=99.57 E-value=5.2e-15 Score=132.06 Aligned_cols=96 Identities=14% Similarity=0.110 Sum_probs=81.9
Q ss_pred CCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCceE
Q 008885 389 KECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAV 467 (550)
Q Consensus 389 ~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~~~~~v 467 (550)
.+|.||...+ ..||+.++.+++.++..|.++||+||||.+|+.++.+|+++++.++....+.+.+.+++ .+...+
T Consensus 4 ~~C~fC~~~~----~~ii~e~~~~~v~l~~~p~~pGh~Lvipk~H~~~l~dL~~~e~~~l~~~~~~~~~~l~~~~~~~~~ 79 (139)
T d2oika1 4 KNCELCTTAG----GEILWQDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMRPDKI 79 (139)
T ss_dssp TTCHHHHSCC----SEEEEECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEE
T ss_pred CcCccccCcC----CeEEEECCCEEEEEcCCCCCCcEEEEecccccchhhhccHHHHHHHHHHHHHHhHHHHhhcchhhh
Confidence 4799997643 46899999999999999999999999999999999999999999999988888887764 566655
Q ss_pred EEeecCCCcCeEEEEEeecCC
Q 008885 468 FFEWLSKRGTHANLQAVPIPT 488 (550)
Q Consensus 468 ~~E~~~~~~~H~hi~~vPvp~ 488 (550)
.+...++.++|+|+|+||+..
T Consensus 80 n~~~~g~~v~HlH~HviPR~~ 100 (139)
T d2oika1 80 NLASLGNMTPHVHWHVIPRFK 100 (139)
T ss_dssp EEEECCSSSCSCEEEEEEECT
T ss_pred HHHHhcCCCCeEEEEEecccC
Confidence 555455668999999999754
|
| >d1kpfa_ d.13.1.1 (A:) Protein kinase C inhibitor-1, PKCI-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: Protein kinase C inhibitor-1, PKCI-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=1.1e-15 Score=131.29 Aligned_cols=97 Identities=18% Similarity=0.099 Sum_probs=77.2
Q ss_pred CCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhhc----CCc
Q 008885 390 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ----GKE 465 (550)
Q Consensus 390 ~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~----~~~ 465 (550)
+|.||.+...-....+|+.++.++++++..|+++||+||||.+|+.++.+++++.+.++..+.+.+.++.++. |++
T Consensus 1 dCiFc~I~~~e~p~~ivyede~~~af~D~~P~~~gH~LViPk~H~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 80 (111)
T d1kpfa_ 1 DTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYR 80 (111)
T ss_dssp CCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCSCGGGCCGGGHHHHHHHHHHHHHHHHHTTCTTCEE
T ss_pred CCcccccccCCCCccEEEeCCCEEEEecCCCCCCceEEEeecchhcchhhhhhHHHHHHHHHHHHHHHHHHHhCCCCCEE
Confidence 6999986433233458899999999999999999999999999999999999998888888888777776653 334
Q ss_pred eEEEe--ecCCCcCeEEEEEeec
Q 008885 466 AVFFE--WLSKRGTHANLQAVPI 486 (550)
Q Consensus 466 ~v~~E--~~~~~~~H~hi~~vPv 486 (550)
++... .+.+.+.|+|+|+||.
T Consensus 81 i~~n~g~~agq~V~HlH~Hiip~ 103 (111)
T d1kpfa_ 81 MVVNEGSDGGQSVYHVHLHVLGG 103 (111)
T ss_dssp EECCCHHHHTCCSSSCCEEEEES
T ss_pred EEEeCCccCCcccceeEEEEeCC
Confidence 33322 2345678999999995
|
| >d1xqua_ d.13.1.1 (A:) Putative hydrolase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: Putative hydrolase species: Clostridium thermocellum [TaxId: 1515]
Probab=99.55 E-value=9.2e-16 Score=132.19 Aligned_cols=99 Identities=17% Similarity=0.135 Sum_probs=79.7
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhhc-----
Q 008885 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ----- 462 (550)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~~----- 462 (550)
+++|.||.+...-....+|+.+++++++++..|.++||+||||.+|++++.+++++.++++....+.+.+++++.
T Consensus 1 m~~CiFC~I~~~e~p~~ivyede~~~af~d~~P~~~gH~LViPk~H~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (113)
T d1xqua_ 1 LENCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILIDIHKAANKVAEDLGIAEK 80 (113)
T ss_dssp CTTCHHHHHHTTSSCBCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHHHHHHHHHHTTCTTT
T ss_pred CCCCcCCcccCCCCcccEEEeCCCEEEEECCCCCCCceEEEeecccccchhhccchhHHHHHHHHHHHHHHHHhhccCCC
Confidence 368999987544445578999999999999999999999999999999999999988888888888888777653
Q ss_pred CCceEEEe--ecCCCcCeEEEEEeec
Q 008885 463 GKEAVFFE--WLSKRGTHANLQAVPI 486 (550)
Q Consensus 463 ~~~~v~~E--~~~~~~~H~hi~~vPv 486 (550)
|+.+++.. ...+.+.|+|+|+||.
T Consensus 81 g~~~~~~~g~~agq~v~HlH~Hvip~ 106 (113)
T d1xqua_ 81 GYRLITNCGVAAGQTVFHLHYHLLGG 106 (113)
T ss_dssp CEEEECCCSTTTTCCSCSCCEEEEES
T ss_pred ceEEEEeCccccccccCeeEEEEeCc
Confidence 34433333 1234578999999995
|
| >d1emsa1 d.13.1.1 (A:281-440) NIT-FHIT fusion protein, C-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: NIT-FHIT fusion protein, C-terminal domain species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.48 E-value=3.6e-14 Score=129.48 Aligned_cols=99 Identities=13% Similarity=0.156 Sum_probs=77.3
Q ss_pred CCCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cC---
Q 008885 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QG--- 463 (550)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~~--- 463 (550)
.+.|.||.- .++...||+.++++|++++..|+++||+||||.+|++++.+|+++++.+|....+.+.+++.+ .+
T Consensus 16 ~~~~~~~~~--eiP~~~ii~ede~~~af~Di~P~~pgH~LVIPK~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~g 93 (160)
T d1emsa1 16 TGGLKFARF--NIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTS 93 (160)
T ss_dssp SSCCEETTE--ECCGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred cCCceEcCC--cCCcceEEEeCCCEEEEECCCCCCCCeEEEEEecccchhhhhhhHHHHHHHHHHHHhhhhhhhccccce
Confidence 445666642 345556899999999999999999999999999999999999999999999988888777664 23
Q ss_pred CceEEEe--ecCCCcCeEEEEEeecCC
Q 008885 464 KEAVFFE--WLSKRGTHANLQAVPIPT 488 (550)
Q Consensus 464 ~~~v~~E--~~~~~~~H~hi~~vPvp~ 488 (550)
+++++.. .+++.++|+|+|+||+..
T Consensus 94 ~ni~~n~G~~aGq~V~HlHiHIIPR~~ 120 (160)
T d1emsa1 94 TTICVQDGKDAGQTVPHVHIHILPRRA 120 (160)
T ss_dssp EEEECCCSGGGTCCSSSCCEEEEEECS
T ss_pred EEEecccCCCCCeEEeEEEEEEECCcC
Confidence 3333322 234457899999999754
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.39 E-value=2.4e-12 Score=117.30 Aligned_cols=150 Identities=11% Similarity=0.037 Sum_probs=97.8
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHH-
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLL- 82 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~- 82 (550)
|||++++|+||++..+-+.++.+.+. .+|.+||+||+.+. +.+..+ .....|++++.|||+.....+.
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~--~~D~ii~~GD~~~~-----~~~~~l----~~~~~~~~~v~GN~D~~~~~~~~ 69 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDE--NVETVIHCGDFVSL-----FVIKEF----ENLNANIIATYGNNDGERCKLKE 69 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHS--CCSEEEECSCCCST-----HHHHHG----GGCSSEEEEECCTTCCCHHHHHH
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhc--CCCEEEECCCccCH-----HHHHHH----hhcCccEEEEcccccccchhhhH
Confidence 89999999999998877777665543 47999999999864 223333 4456789999999986432221
Q ss_pred HhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCC
Q 008885 83 AASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNE 162 (550)
Q Consensus 83 ~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh~ 162 (550)
..... .. .. .+.....++++ +..|++||.
T Consensus 70 ~~~~~--------~~----~~--~~~~~~~~~~~-------------------------------------~~~i~l~Hg 98 (165)
T d1s3la_ 70 WLKDI--------NE----EN--IIDDFISVEID-------------------------------------DLKFFITHG 98 (165)
T ss_dssp HHHHH--------CT----TC--EEESEEEEEET-------------------------------------TEEEEEEES
T ss_pred hhhhh--------cc----cc--cCChhhceEEC-------------------------------------CcEEEEEEC
Confidence 11100 00 01 11111112222 357889998
Q ss_pred CCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCCcccceeE
Q 008885 163 WPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFI 242 (550)
Q Consensus 163 wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~~~K~Kw~ 242 (550)
+|..+ +++++...++++.|+||.|..+.+ ....|.|||+|++|.+.+.+--
T Consensus 99 ~~~~~----------------------~~~~~~~~~~d~v~~GHtH~~~~~-------~~~~~~~iNPGSvg~p~~~~~s 149 (165)
T d1s3la_ 99 HHQSV----------------------LEMAIKSGLYDVVIYGHTHERVFE-------EVDDVLVINPGECCGYLTGIPT 149 (165)
T ss_dssp CCHHH----------------------HHHHHHHSCCSEEEEECSSCCEEE-------EETTEEEEECCCSSCTTTSCCE
T ss_pred CcccH----------------------HHHHhhcCCCCEEEECCcCcceEE-------EECCEEEEECCCCCCCCCCCCE
Confidence 77643 345677889999999999875443 3457999999999875443334
Q ss_pred EE
Q 008885 243 HA 244 (550)
Q Consensus 243 yA 244 (550)
||
T Consensus 150 ~~ 151 (165)
T d1s3la_ 150 IG 151 (165)
T ss_dssp EE
T ss_pred EE
Confidence 44
|
| >d1fita_ d.13.1.1 (A:) FHIT (fragile histidine triad protein) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins domain: FHIT (fragile histidine triad protein) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.35 E-value=6.9e-13 Score=119.05 Aligned_cols=88 Identities=15% Similarity=0.199 Sum_probs=71.6
Q ss_pred cceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh-c---CCceEEEe--ecCCC
Q 008885 402 SHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-Q---GKEAVFFE--WLSKR 475 (550)
Q Consensus 402 ~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~---~~~~v~~E--~~~~~ 475 (550)
...||+.++.++++++..|+++||+||||.+|++++.+|+++++.+|.+..+.+.+++.+ . |+++++.. ...+.
T Consensus 11 p~~ii~e~e~~~afld~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~~~g~~agq~ 90 (146)
T d1fita_ 11 PSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQT 90 (146)
T ss_dssp GGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSGGGTCC
T ss_pred cceEEEECCCEEEEECCCCCCCcEEEEEecceehHHHHhhHHHHHHHHHHHHHHHHHHHhhcccceEEEEEccccccCCC
Confidence 456899999999999999999999999999999999999999999999988887777664 2 33333332 12345
Q ss_pred cCeEEEEEeecCCC
Q 008885 476 GTHANLQAVPIPTS 489 (550)
Q Consensus 476 ~~H~hi~~vPvp~~ 489 (550)
+.|+|+|+||+...
T Consensus 91 v~HlH~HiiPR~~g 104 (146)
T d1fita_ 91 VKHVHVHVLPRKAG 104 (146)
T ss_dssp SSSCCEEEEEECTT
T ss_pred CCEEEEEEecCcCC
Confidence 78999999997653
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.31 E-value=4.8e-11 Score=116.89 Aligned_cols=186 Identities=13% Similarity=0.105 Sum_probs=109.3
Q ss_pred CEEEEEcCCC---------CCh---HHHHHHHHHHhhhcCCCcEEEEecCCCCCChh-hHHHHHHHhcccCCCCccEEEE
Q 008885 4 PRILLCGDVL---------GRL---NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-LLDEFMNYVEGRSEIPIPTYFI 70 (550)
Q Consensus 4 ~KILv~GDvh---------G~~---~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~-~~~~~~~~l~g~~~~p~ptyfv 70 (550)
|||+.++|+| |.. +.+-+.++.+++.....|+||++||+...... +-+.+.++| .++++|+|++
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~~~~y~~~~~~l---~~l~~p~~~i 77 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQIL---GSLNYPLYLI 77 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHH---TTCSSCEEEE
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCCcchhHHHHHHHH---hccCCCEEEE
Confidence 8999999999 221 22333345555444467999999999764332 223456666 5678999999
Q ss_pred ecCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHH-hh
Q 008885 71 GDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRA-LA 149 (550)
Q Consensus 71 ~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~-l~ 149 (550)
+||||....+.+.+...... ... ...+. ...+...+.+|.+|...... .....+.+++++-|.+ +.
T Consensus 78 ~GNHD~~~~~~~~~~~~~~~----~~~--~~~~~-----~~~~~~~~~~~i~ldt~~~~--~~~~~l~~~ql~wL~~~L~ 144 (271)
T d3d03a1 78 PGNHDDKALFLEYLQPLCPQ----LGS--DANNM-----RCAVDDFATRLLFIDSSRAG--TSKGWLTDETISWLEAQLF 144 (271)
T ss_dssp CCTTSCHHHHHHHHGGGSGG----GCS--CGGGC-----CEEECSSSSEEEECCCCCTT--CSSBCCCHHHHHHHHHHHH
T ss_pred ecCccchHHHHHHhhhhhhc----ccc--ccCcc-----eEEEecCCeEEEecccccCC--CCcceecHHHHHHHHHHHh
Confidence 99999865555554321100 000 00010 01112347778777554321 1123567777776654 33
Q ss_pred cCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccc
Q 008885 150 EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYA 212 (550)
Q Consensus 150 ~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~f~e 212 (550)
+.....-|+++|.+|..+...... +. .......+.+++++. ..++.||||.|..+.
T Consensus 145 ~~~~~~~iv~~Hh~p~~~~~~~~d---~~----~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~ 201 (271)
T d3d03a1 145 EGGDKPATIFMHHPPLPLGNAQMD---PI----ACENGHRLLALVERFPSLTRIFCGHNHSLTM 201 (271)
T ss_dssp HHTTSCEEEEESSCSSCCSCTTTG---GG----SBTTTHHHHHHHHHCTTEEEEEECSSSSCEE
T ss_pred hhccceeEEEeccCccccCccccc---cc----cccchHHHHHHHHhcCCeEEEEeCCcchhhc
Confidence 223445688899999766432111 10 123466788888876 588999999986554
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.25 E-value=5.6e-11 Score=114.97 Aligned_cols=186 Identities=12% Similarity=0.068 Sum_probs=111.6
Q ss_pred CCEEEEEcCCCC----C--------hHHHHHHHHHHhhhcCCCcEEEEecCCCCCChh-hHHHHHHHhccc-CCCCccEE
Q 008885 3 PPRILLCGDVLG----R--------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-LLDEFMNYVEGR-SEIPIPTY 68 (550)
Q Consensus 3 ~~KILv~GDvhG----~--------~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~-~~~~~~~~l~g~-~~~p~pty 68 (550)
.|||+.++|+|= + .+.+.+.++.+++...+.|+||++||++..... +-+.+.+++... ..+++|+|
T Consensus 4 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~~~~~~~~~~~l~~~~~~~~~p~~ 83 (256)
T d2hy1a1 4 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELV 83 (256)
T ss_dssp SEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCCHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCChhHHHHHHHHhhhhhhhcCCCEE
Confidence 489999999992 1 223333445555444468999999999764332 122333433221 34678999
Q ss_pred EEecCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHh
Q 008885 69 FIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRAL 148 (550)
Q Consensus 69 fv~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l 148 (550)
+|.||||....+...+... . .+. ......+.++|.+|.++.-... ......++++.++.|.+.
T Consensus 84 ~v~GNHD~~~~~~~~~~~~---------~----~~~--~~~~~~~~~~~~~~~~ldt~~~--~~~~g~~~~~~~~wl~~~ 146 (256)
T d2hy1a1 84 WVMGNHDDRAELRKFLLDE---------A----PSM--APLDRVCMIDGLRIIVLDTSVP--GHHHGEIRASQLGWLAEE 146 (256)
T ss_dssp ECCCTTSCHHHHHHHTTCC---------C----CCC--SCCCEEEEETTEEEEECCCBCT--TCSSBCCCHHHHHHHHHH
T ss_pred EEcccccchhhhhhhhccc---------c----ccc--cccceEEEecccceeeeeeeec--CCcCCcccHHHHHHHHHH
Confidence 9999998754444433211 0 000 0112244678888887743321 111235677777777764
Q ss_pred h-cCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccc
Q 008885 149 A-EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYA 212 (550)
Q Consensus 149 ~-~~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~e 212 (550)
. ......-|+++|.+|......... . .....+..+.+++++.+.++.||||.|..+.
T Consensus 147 L~~~~~~~~iv~~Hhpp~~~~~~~~~-----~--~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~ 204 (256)
T d2hy1a1 147 LATPAPDGTILALHHPPIPSVLDMAV-----T--VELRDQAALGRVLRGTDVRAILAGHLHYSTN 204 (256)
T ss_dssp HTSCCTTCEEEECSSCSSCCSSHHHH-----T--TSBCCHHHHHHHHTTSSEEEEEECSSSSCEE
T ss_pred HHhhhccCceeeeecCCccccccccc-----c--cccccHHHHHHHHhccCceEEEccccchhhc
Confidence 3 233345589999999876321110 0 1124577899999999999999999886443
|
| >d1z84a2 d.13.1.2 (A:196-351) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: Hexose-1-phosphate uridylyltransferase domain: Galactose-1-phosphate uridylyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.18 E-value=3.2e-11 Score=109.09 Aligned_cols=99 Identities=15% Similarity=0.220 Sum_probs=76.9
Q ss_pred CCCcccCCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCceE
Q 008885 389 KECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAV 467 (550)
Q Consensus 389 ~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~~~~~v 467 (550)
..|.||... .+.+||+.++++++++|..|..|||+||||.+|++++.+++++++.+|....+.+.+++.+ .+....
T Consensus 19 ~~Cifc~i~---~~~riV~e~~~~~a~~p~~p~~p~h~lIiPk~h~~~~~~l~~~e~~~l~~~~~~v~~~l~~~~~~~~~ 95 (156)
T d1z84a2 19 GKCCLCEAK---SKHFVIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPY 95 (156)
T ss_dssp SSCTTTTHH---HHSEEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTSCCE
T ss_pred CCCceEEec---CCCEEEEECCCEEEEEccCCCcCcEEEEEecchhhhhccCCHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 479999653 3347999999999999999999999999999999999999999999999988888888764 333222
Q ss_pred EEe-e-c--CCC-----cCeEEEEEeecCCCc
Q 008885 468 FFE-W-L--SKR-----GTHANLQAVPIPTSK 490 (550)
Q Consensus 468 ~~E-~-~--~~~-----~~H~hi~~vPvp~~~ 490 (550)
.+- . . +.. ..|+|+|++|.-+..
T Consensus 96 n~~~~~~p~~~~~~~~~~~H~hi~~~Pr~~~~ 127 (156)
T d1z84a2 96 NYMIHTSPLKVTESQLPYTHWFLQIVPQLSGV 127 (156)
T ss_dssp EEEEECCCTTCCGGGGGGCCCEEEEEECCCCC
T ss_pred cHhhhcCCCCCcccCceeEEEEEEecCCCCcc
Confidence 221 1 1 111 359999999965443
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.17 E-value=1.2e-10 Score=107.03 Aligned_cols=133 Identities=15% Similarity=0.016 Sum_probs=90.7
Q ss_pred CCCCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHH
Q 008885 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKV 80 (550)
Q Consensus 1 M~~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~ 80 (550)
|+++||+|++|+||++..|-+.++.+. +.+|+||++||+..... .....++++|.|||+...
T Consensus 1 m~~~kI~viSD~Hgn~~al~~vl~~~~---~~~D~iih~GD~~~~~~-------------~~~~~~~~~V~GN~D~~~-- 62 (173)
T d3ck2a1 1 MAKQTIIVMSDSHGDSLIVEEVRDRYV---GKVDAVFHNGDSELRPD-------------SPLWEGIRVVKGNMDFYA-- 62 (173)
T ss_dssp CCCEEEEEECCCTTCHHHHHHHHHHHT---TTSSEEEECSCCCSCTT-------------CGGGTTEEECCCTTCCST--
T ss_pred CCCCEEEEEeccCCCHHHHHHHHHHhh---cCCCEEEECCcccCccc-------------chhhcCCeEEecCccccc--
Confidence 999999999999999987666554432 25899999999865421 112246899999997420
Q ss_pred HHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEe
Q 008885 81 LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLT 160 (550)
Q Consensus 81 l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLT 160 (550)
. +.. ..+++++|++| +++
T Consensus 63 ----------------~--~~~-------~~~~~~~~~~~-------------------------------------~~~ 80 (173)
T d3ck2a1 63 ----------------G--YPE-------RLVTELGSTKI-------------------------------------IQT 80 (173)
T ss_dssp ----------------T--CCS-------EEEEEETTEEE-------------------------------------EEE
T ss_pred ----------------c--cce-------EEEEEECCEEE-------------------------------------EEE
Confidence 0 011 12345555554 455
Q ss_pred CCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCCc
Q 008885 161 NEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNK 236 (550)
Q Consensus 161 h~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~~ 236 (550)
|-.|.+. ..+...+.+++....+.+.|+||.|..+-+ ....+.|||+|++|.+
T Consensus 81 Hg~~~~~----------------~~~~~~l~~~~~~~~~dvvi~GHTH~p~~~-------~~~~~~~iNPGSvg~p 133 (173)
T d3ck2a1 81 HGHLFDI----------------NFNFQKLDYWAQEEEAAICLYGHLHVPSAW-------LEGKILFLNPGSISQP 133 (173)
T ss_dssp CSGGGTT----------------TTCSHHHHHHHHHTTCSEEECCSSCCEEEE-------EETTEEEEEECCSSSC
T ss_pred eCcCCCC----------------CCCHHHHHHHHHhcCCCEEEeCCcCcceEE-------EECCEEEEECCCCCCC
Confidence 5544432 124456788888899999999999975543 2457999999999864
|
| >d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: Hexose-1-phosphate uridylyltransferase domain: Galactose-1-phosphate uridylyltransferase species: Escherichia coli [TaxId: 562]
Probab=99.14 E-value=1.6e-11 Score=112.61 Aligned_cols=98 Identities=13% Similarity=0.072 Sum_probs=75.3
Q ss_pred CCCcccCCC-CC-CCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cC--
Q 008885 389 KECWFCLSS-PS-VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QG-- 463 (550)
Q Consensus 389 ~~C~FC~~~-~~-~~~hliis~g~~~yl~l~kgpl~~gH~lIiP~~H~~s~~~l~~~~~~Ei~~~~~~L~~~~~~-~~-- 463 (550)
..|.||.+- .. -.+..||+.++++.+++|..|..|||+||||.+|++++.+|+++++++|....+.+.+++.+ .+
T Consensus 17 ~~clfcdii~~E~~~~~RiV~e~e~~~af~~~~p~~p~h~lIiPk~h~~~~~~l~~~e~~~L~~~~~~v~~~l~~~~~~~ 96 (171)
T d1guqa2 17 KSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCS 96 (171)
T ss_dssp SSCHHHHHHHHHHHHCTTEEEECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCCcHHHHHHhhccCCCeEEEECCeEEEEEcCCCCCcceEEEecchhcCChhhCCHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 479999753 11 23457999999999999999999999999999999999999999999999888877777654 22
Q ss_pred --CceEEEee-cC---CCcCeEEEEEeec
Q 008885 464 --KEAVFFEW-LS---KRGTHANLQAVPI 486 (550)
Q Consensus 464 --~~~v~~E~-~~---~~~~H~hi~~vPv 486 (550)
+...+... .+ ....|+|+|++|.
T Consensus 97 ~~y~~~~~~~p~~~~~~~~~H~Hihi~Pr 125 (171)
T d1guqa2 97 FPYSMGWHGAPFNGEENQHWQLHAHFYPP 125 (171)
T ss_dssp CCEEEEEECCCSSSSCCTTCCCEEEEECC
T ss_pred cchhhhhhcCccccCCCceeEEEEEEccC
Confidence 23333331 11 1246999999994
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.04 E-value=3.2e-10 Score=105.02 Aligned_cols=136 Identities=13% Similarity=0.106 Sum_probs=87.0
Q ss_pred CEEEEEcCCCCChHH--HHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHH
Q 008885 4 PRILLCGDVLGRLNQ--LFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVL 81 (550)
Q Consensus 4 ~KILv~GDvhG~~~~--l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l 81 (550)
|||||++|+||+... +-+++.++-+ .+++|.+||+||+.+. +..++| .++..++++|.|||+...
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~-~~~~D~Ii~~GDi~~~------e~l~~l---~~~~~~v~~V~GN~D~~~--- 67 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLV-PGKIQHILCTGNLCTK------ESYDYL---KTLAGDVHIVRGDFDENL--- 67 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCC-TTSCSEEEECSCCBSH------HHHHHH---HHHCSEEEECCCTTCCCT---
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhc-ccCCCEEEEccCccch------hhHHHH---HhhCCceEEEeCCcCccc---
Confidence 899999999986543 2233443322 3469999999999751 233343 334457899999997420
Q ss_pred HHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeC
Q 008885 82 LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTN 161 (550)
Q Consensus 82 ~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh 161 (550)
. +....++++.|.+ |++||
T Consensus 68 --------------~----------~p~~~~~~~~g~~-------------------------------------i~~~H 86 (182)
T d1z2wa1 68 --------------N----------YPEQKVVTVGQFK-------------------------------------IGLIH 86 (182)
T ss_dssp --------------T----------SCSEEEEEETTEE-------------------------------------EEEEC
T ss_pred --------------c----------cceEEEEEEcCcE-------------------------------------EEEEe
Confidence 0 0011233455544 45566
Q ss_pred CCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCCc
Q 008885 162 EWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNK 236 (550)
Q Consensus 162 ~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~~ 236 (550)
..+... ......+.++++..++.+.|+||.|..+-. ....+.|||+|+++-+
T Consensus 87 g~~~~~----------------~~~~~~l~~~~~~~~~divi~GHTH~p~~~-------~~~~~~~iNPGSv~~p 138 (182)
T d1z2wa1 87 GHQVIP----------------WGDMASLALLQRQFDVDILISGHTHKFEAF-------EHENKFYINPGSATGA 138 (182)
T ss_dssp SCCCCB----------------TTCHHHHHHHHHHHSSSEEECCSSCCCEEE-------EETTEEEEECCCTTCC
T ss_pred CCCCCC----------------CCCHHHHHHHHhccCCCEEEECCcCcceEE-------EECCEEEEeCCCCCCC
Confidence 543321 123456788888999999999999875442 2457999999999753
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=98.96 E-value=1.6e-09 Score=101.07 Aligned_cols=144 Identities=12% Similarity=0.100 Sum_probs=85.3
Q ss_pred EEEEEcCCCCChHH--HHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHH
Q 008885 5 RILLCGDVLGRLNQ--LFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLL 82 (550)
Q Consensus 5 KILv~GDvhG~~~~--l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~ 82 (550)
-|||+||+|++... +.+++.++.+ .+++|.|||+||+.+. + ..++| .++..++++|.||||... ..
T Consensus 5 lIlviSD~H~~~~~~~l~~~~~~~~~-~~~vD~ii~~GDi~~~--~----~l~~l---~~l~~~v~~V~GN~D~~~--~~ 72 (193)
T d2a22a1 5 LVLLIGDLKIPYGAKELPSNFRELLA-TDKINYVLCTGNVCSQ--E----YVEML---KNITKNVYIVSGDLDSAI--FN 72 (193)
T ss_dssp EEEEECCCCTTTTCSSCCGGGHHHHH-CTTCCEEEECSCCCCH--H----HHHHH---HHHCSCEEECCCTTCCSC--CB
T ss_pred EEEEEeCCCCCcccchhhHHHHHHhc-cCCCCEEEECCCCCCH--H----HHHHH---HhhCCCEEEEcCCCCcch--hh
Confidence 49999999985332 2222333322 3479999999999752 2 23333 223346899999998521 00
Q ss_pred HhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeCC
Q 008885 83 AASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNE 162 (550)
Q Consensus 83 ~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~~~~~vDILLTh~ 162 (550)
......-.|....+++++|++| +++|.
T Consensus 73 ----------------~~~~~~~~lp~~~~~~~~~~~i-------------------------------------~l~H~ 99 (193)
T d2a22a1 73 ----------------PDPESNGVFPEYVVVQIGEFKI-------------------------------------GLMHG 99 (193)
T ss_dssp ----------------CCGGGTBCCCSEEEEEETTEEE-------------------------------------EEECS
T ss_pred ----------------hhHHHHhhCCccEEEEECCEEE-------------------------------------EEEec
Confidence 0001111122223345566555 44443
Q ss_pred CCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCCc
Q 008885 163 WPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNK 236 (550)
Q Consensus 163 wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~~ 236 (550)
.+... ......+.+++...++++.|+||.|..+-+ ....|.|||+|+++.+
T Consensus 100 ~~~~~----------------~~~~~~l~~~~~~~~~dvvi~GHTH~~~~~-------~~~g~~~iNPGSvg~p 150 (193)
T d2a22a1 100 NQVLP----------------WDDPGSLEQWQRRLDCDILVTGHTHKLRVF-------EKNGKLFLNPGTATGA 150 (193)
T ss_dssp TTSSS----------------TTCHHHHHHHHHHHTCSEEEECSSCCCEEE-------EETTEEEEECCCSSCC
T ss_pred cCCCC----------------CCCHHHHHHHHhhcCCCEEEEcCccCceEE-------EECCEEEEECCCCCcC
Confidence 32211 112346788899999999999999874442 3457999999999753
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.87 E-value=1.2e-08 Score=93.02 Aligned_cols=69 Identities=9% Similarity=0.124 Sum_probs=49.0
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh-------hhHHHHHHHhcccCCCCccEEEEecCCC
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-------ELLDEFMNYVEGRSEIPIPTYFIGDYGV 75 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~-------~~~~~~~~~l~g~~~~p~ptyfv~GNhe 75 (550)
.|||+++||+||++..+-+.++.+.+. ..|.+||+||++.... ....++.+.+ .....++++|.|||+
T Consensus 1 mMki~iiSDiHg~~~al~~vl~~~~~~--~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~GNhD 75 (184)
T d1su1a_ 1 MMKLMFASDIHGSLPATERVLELFAQS--GAQWLVILGDVLNHGPRNALPEGYAPAKVVERL---NEVAHKVIAVRGNCD 75 (184)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHH--TCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHH---HTTGGGEEECCCTTC
T ss_pred CcEEEEEeecCCCHHHHHHHHHHHhhc--CCCEEEEcCcccccCccchhhhccCcHHHHHHH---HhcCCcEEEecCCCC
Confidence 489999999999998776656555543 4799999999975311 1122333333 456678999999998
Q ss_pred C
Q 008885 76 G 76 (550)
Q Consensus 76 ~ 76 (550)
.
T Consensus 76 ~ 76 (184)
T d1su1a_ 76 S 76 (184)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.84 E-value=1.3e-08 Score=96.45 Aligned_cols=189 Identities=11% Similarity=0.086 Sum_probs=99.2
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhh---hcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHH
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNK---SAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKV 80 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~---k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~ 80 (550)
++|+++||+||++..|-+.++.+.. ...++|.+|++||++.-... ..+..+++....+ ..++++|.||||. .+
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~~-~~evi~~l~~l~~-~~~v~~v~GNHD~--~~ 76 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPY-PKEVIEVIKDLTK-KENVKIIRGKYDQ--II 76 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSC-HHHHHHHHHHHHH-HSCEEEECCHHHH--HH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCCC-cHHHHHHHHHHhh-cCCEEEEeccHHH--HH
Confidence 5899999999998877666665543 34578999999999753322 2233344321111 2368999999972 23
Q ss_pred HHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhh----cCCCCcc
Q 008885 81 LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALA----EEPGIVD 156 (550)
Q Consensus 81 l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~----~~~~~vD 156 (550)
+...... .... ..... ...+... .. +... ...++++.++-+..+. ....+.+
T Consensus 77 ~~~~~~~-------~~~~--~~~~~--~~~~~~~-~~-----~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~ 132 (251)
T d1nnwa_ 77 AMSDPHA-------TDPG--YIDKL--ELPGHVK-KA-----LKFT-------WEKLGHEGREYLRDLPIYLVDKIGGNE 132 (251)
T ss_dssp HHSCTTC-------SSSG--GGGGS--SCCHHHH-HH-----HHHH-------HHHHHHHHHHHHHTSCSCEEEEETTEE
T ss_pred Hhccccc-------cccc--hhhhh--ccchhHH-Hh-----hHHH-------hhhcCHHHHHHHHhcccceEEeeCCCc
Confidence 3221100 0000 00000 0000000 00 0000 0001122222233221 1124578
Q ss_pred EEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeEEEEcCCCCC
Q 008885 157 LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (550)
Q Consensus 157 ILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~La~~g~ 235 (550)
++++|.+|......... ....+.......... ..++.|+||.|.-+.+ ....+++||.|++|-
T Consensus 133 ~~~~H~~p~~~~~~~~~---------~~~~~~~~~~~~~~~~~~d~vv~GHtH~~~~~-------~~~~~~~in~Gsvg~ 196 (251)
T d1nnwa_ 133 VFGVYGSPINPFDGEVL---------AEQPTSYYEAIMRPVKDYEMLIVASPMYPVDA-------MTRYGRVVCPGSVGF 196 (251)
T ss_dssp EEEESSCSSCTTTCCCC---------SSCCHHHHHHHHGGGTTSSEEEESTTCSEEEE-------EETTEEEEEECCSSS
T ss_pred EEEEecCccCcccchhh---------hhhHHHHHhhhcccccCceEEEEeccceEEEE-------Eeeeeeccccccccc
Confidence 99999999875432211 123444455544433 4689999998865543 245689999999985
Q ss_pred c
Q 008885 236 K 236 (550)
Q Consensus 236 ~ 236 (550)
+
T Consensus 197 ~ 197 (251)
T d1nnwa_ 197 P 197 (251)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=98.39 E-value=1.4e-06 Score=83.43 Aligned_cols=71 Identities=10% Similarity=-0.018 Sum_probs=45.5
Q ss_pred CEEEEEcCCCC-------------------ChHHHHHHHHHHhhhcCCCcEEEEecCCCCCCh----hhHHHHHHHhccc
Q 008885 4 PRILLCGDVLG-------------------RLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS----ELLDEFMNYVEGR 60 (550)
Q Consensus 4 ~KILv~GDvhG-------------------~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~----~~~~~~~~~l~g~ 60 (550)
.||++++|+|= .+..+-+.++.+++. .+|+||++||++.... ...+.+..++.-.
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~--~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRE--RVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL 81 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHT--TCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhC--CCCEEEECCCCCCCCCcchhHHHHHHHHHHHHH
Confidence 58999999992 133344445555543 4799999999975311 1122333333322
Q ss_pred CCCCccEEEEecCCCC
Q 008885 61 SEIPIPTYFIGDYGVG 76 (550)
Q Consensus 61 ~~~p~ptyfv~GNhe~ 76 (550)
..+++|+++++|||+.
T Consensus 82 ~~~~~p~~~v~GNHD~ 97 (320)
T d2nxfa1 82 DACSVDVHHVWGNHEF 97 (320)
T ss_dssp HTTCSEEEECCCHHHH
T ss_pred HHcCCCEEEecccCcc
Confidence 5678999999999974
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=98.22 E-value=1.4e-05 Score=79.05 Aligned_cols=204 Identities=16% Similarity=0.135 Sum_probs=107.2
Q ss_pred CCEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCC-C--Ch---hhHHHHHHHhcccCCCCccEEEEecCCCC
Q 008885 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFP-D--SS---ELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (550)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~-~--~~---~~~~~~~~~l~g~~~~p~ptyfv~GNhe~ 76 (550)
+.|++|+||.+..... ...+..+.......|+||++||+.- . .. ..-++|.+.+.. ....+|.++++||||.
T Consensus 7 p~~F~v~GD~g~~~~~-~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~-~~~~~P~~~~~GNHD~ 84 (312)
T d2qfra2 7 PYTFGLIGDLGQSFDS-NTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTER-SVAYQPWIWTAGNHEI 84 (312)
T ss_dssp CEEEEEECSCCSBHHH-HHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHH-HHTTSCEEECCCGGGT
T ss_pred CEEEEEEeeCCCCCch-HHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHH-HhhcceEEEecccccc
Confidence 5799999998765443 3444444333446799999999852 1 11 111233333332 1234799999999983
Q ss_pred hH-----------HHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHH
Q 008885 77 AA-----------KVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDAL 145 (550)
Q Consensus 77 ~~-----------~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L 145 (550)
.. .+...... +..+..-..+.+| .+..+++.+..|.-.... ...+ ++.+-|
T Consensus 85 ~~~~~~~~~~~~~~~~~~f~~-------P~~~~~~~~~~~Y-----sf~~g~v~fi~Lds~~~~-----~~~~-~Q~~WL 146 (312)
T d2qfra2 85 EFAPEINETEPFKPFSYRYHV-------PYEASQSTSPFWY-----SIKRASAHIIVLSSYSAY-----GRGT-PQYTWL 146 (312)
T ss_dssp CCBGGGTBCSTTHHHHHHCCC-------CGGGGTCSSTTSE-----EEEETTEEEEECCTTSCC-----STTS-HHHHHH
T ss_pred cccccccccccccchhhhccC-------CccccCCCCCceE-----EEEECCEEEEEeeccccc-----cchH-HHHHHH
Confidence 11 01111100 0000000011111 245678888877643211 1112 334444
Q ss_pred HH-hhcC-CCCcc--EEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcccc-ccccCCC
Q 008885 146 RA-LAEE-PGIVD--LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAR-EPYSNVD 220 (550)
Q Consensus 146 ~~-l~~~-~~~vD--ILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er-~Py~~~~ 220 (550)
++ |+.. ....+ |++.|.|+..-...... ........+..|+.+.+-.++|+||.| .||| .|..+..
T Consensus 147 ~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~--------~~~~~r~~l~~l~~~~~Vdlv~~GH~H-~YeRt~p~~~~~ 217 (312)
T d2qfra2 147 KKELRKVKRSETPWLIVLMHSPLYNSYNHHFM--------EGEAMRTKFEAWFVKYKVDVVFAGHVH-AYERSERVSNIA 217 (312)
T ss_dssp HHHHHTCCTTTCCEEEEECSSCSSCCBSTTTT--------TTHHHHHHHHHHHHHTTCSEEEECSSS-SEEEECSEECCC
T ss_pred HHHHHHHhhcCCCEEEEEccccccccCCCCcc--------cchhHHHHHHHHHHHcCcEEEEEccCc-ceEEEeeccCCc
Confidence 43 3322 23333 78899998764321110 001123467788889999999999988 5665 4443221
Q ss_pred ------------CcceeEEEEcCCCCC
Q 008885 221 ------------AVHVTRFLGLAPVGN 235 (550)
Q Consensus 221 ------------~~~~TRFI~La~~g~ 235 (550)
....|..|-.|.-|+
T Consensus 218 ~~~~~~~~~~~~~~~g~vyiv~G~gG~ 244 (312)
T d2qfra2 218 YKITNGLCTPVKDQSAPVYITIGDAGN 244 (312)
T ss_dssp CCSSSCCCSCEECTTSCEEEEECCSCT
T ss_pred ccccCCccccccCCCcCEEEEECcCCC
Confidence 123566777777775
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.15 E-value=8.9e-06 Score=74.70 Aligned_cols=157 Identities=10% Similarity=-0.017 Sum_probs=88.4
Q ss_pred CEEEEEcCCCCChHH------------HH-HHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEE
Q 008885 4 PRILLCGDVLGRLNQ------------LF-KRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFI 70 (550)
Q Consensus 4 ~KILv~GDvhG~~~~------------l~-~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv 70 (550)
.+|++++|+|=.... .- .-++.+++.-++-|.|+++|||...... .+++.+++ .+++...++|
T Consensus 2 ~mi~fiSD~Hfgh~~i~~~r~f~~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~-~~~~~~~l---~~L~g~~~lI 77 (188)
T d1xm7a_ 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFND-KNEYLRIW---KALPGRKILV 77 (188)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCC-TTSHHHHH---HHSSSEEEEE
T ss_pred CeEEEEeCcCCCCcchhhcCCCCCHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCC-HHHHHHHH---HHCCCceEEE
Confidence 369999999921111 11 1256677766788999999999532111 12345555 4456678999
Q ss_pred ecCCCChHHHHHHhhccccccCcccCCceecCcEEEcCCCCeEEEcCeEEEEEeCccCCCCCCCCCCCHHHHHHHHHhhc
Q 008885 71 GDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAE 150 (550)
Q Consensus 71 ~GNhe~~~~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~gv~~i~GlrIa~lgG~~~~~~~~~~~~te~di~~L~~l~~ 150 (550)
.||||.....+.. ....+.+.. .++.+
T Consensus 78 ~GNHD~~~~~~~~------------~~~~~~~~~------~~~~~----------------------------------- 104 (188)
T d1xm7a_ 78 MGNHDKDKESLKE------------YFDEIYDFY------KIIEH----------------------------------- 104 (188)
T ss_dssp CCTTCCCHHHHTT------------TCSEEESSE------EEEEE-----------------------------------
T ss_pred ecCCCchhhhhhh------------chhhHHHHH------HHhhh-----------------------------------
Confidence 9999864221110 000111110 01111
Q ss_pred CCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEc
Q 008885 151 EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGL 230 (550)
Q Consensus 151 ~~~~vDILLTh~wP~gi~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f~er~Py~~~~~~~~TRFI~L 230 (550)
.+-.|+|||.|+..-... . .......+.++..+.+..++++||.|.......... .....|+++.
T Consensus 105 --~g~~i~l~H~P~~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~lhGH~H~~~~~~~~~~--~~~~~~~~nV 169 (188)
T d1xm7a_ 105 --KGKRILLSHYPAKDPITE-R----------YPDRQEMVREIYFKENCDLLIHGHVHWNREGIKCAC--KDYRIECINA 169 (188)
T ss_dssp --TTEEEEEESSCSSCSSCC-S----------CHHHHHHHHHHHHHTTCSEEEECCCCCCSCC--CCT--TSSSCCEEEC
T ss_pred --CCeEEEEEeCCCcccccc-c----------cccchhHHHHHHHhcCceEEEEeeccCCcccccccc--ccCCCCEEEe
Confidence 234689999998643210 0 112345677888899999999999886544322211 2334667776
Q ss_pred CC
Q 008885 231 AP 232 (550)
Q Consensus 231 a~ 232 (550)
|-
T Consensus 170 ~v 171 (188)
T d1xm7a_ 170 NV 171 (188)
T ss_dssp BG
T ss_pred ee
Confidence 64
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.06 E-value=2.5e-06 Score=82.36 Aligned_cols=72 Identities=21% Similarity=0.138 Sum_probs=43.5
Q ss_pred CCEEEEEcCCCCChH---------HHHHHHHHHhhhcCCCcEEEEecCCCC---CChhhHHHHHHHhc----ccCCCCcc
Q 008885 3 PPRILLCGDVLGRLN---------QLFKRVQSVNKSAGPFDAVLCVGQFFP---DSSELLDEFMNYVE----GRSEIPIP 66 (550)
Q Consensus 3 ~~KILv~GDvhG~~~---------~l~~kv~~l~~k~GpfD~li~~GDff~---~~~~~~~~~~~~l~----g~~~~p~p 66 (550)
++|++|+||+|+.-. ...+.+.++.++. +.|+||++||+.- ..+.....|...+. ......+|
T Consensus 4 ~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~P 82 (302)
T d1utea_ 4 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTL-GADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVP 82 (302)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHH-CCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCC
T ss_pred CeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhC-CCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcCCc
Confidence 579999999986311 2223333333333 5799999999852 11111223443332 22346789
Q ss_pred EEEEecCCC
Q 008885 67 TYFIGDYGV 75 (550)
Q Consensus 67 tyfv~GNhe 75 (550)
+|++.||||
T Consensus 83 ~~~~~GNHD 91 (302)
T d1utea_ 83 WHVLAGNHD 91 (302)
T ss_dssp EEECCCHHH
T ss_pred eEEeecccc
Confidence 999999997
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.01 E-value=3.4e-06 Score=82.24 Aligned_cols=73 Identities=19% Similarity=0.284 Sum_probs=46.5
Q ss_pred CEEEEEcCCC-CC-----------hHHHHHHHHHHhhhcCCCcEEEEecCCCCCC---hhhHHHHHHHhcccCCCCccEE
Q 008885 4 PRILLCGDVL-GR-----------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDS---SELLDEFMNYVEGRSEIPIPTY 68 (550)
Q Consensus 4 ~KILv~GDvh-G~-----------~~~l~~kv~~l~~k~GpfD~li~~GDff~~~---~~~~~~~~~~l~g~~~~p~pty 68 (550)
||||.++|+| |. +...++++-....+. ..|+||++||+|... ......+.+++......++|+|
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~-~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v~ 79 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQE-NVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVF 79 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHT-TCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEE
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHc-CCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcEE
Confidence 8999999999 21 122333332222233 479999999998642 2233334444443356789999
Q ss_pred EEecCCCCh
Q 008885 69 FIGDYGVGA 77 (550)
Q Consensus 69 fv~GNhe~~ 77 (550)
+++||||..
T Consensus 80 ~i~GNHD~~ 88 (333)
T d1ii7a_ 80 AIEGNHDRT 88 (333)
T ss_dssp EECCTTTCC
T ss_pred EeCCCCccc
Confidence 999999864
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=97.83 E-value=4.8e-06 Score=77.59 Aligned_cols=71 Identities=14% Similarity=0.196 Sum_probs=51.1
Q ss_pred EEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCChHHHHHHh
Q 008885 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAA 84 (550)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~~~~l~~l 84 (550)
||+||||+||+++.|.+.++++.... +-|.+|++||++.-..+.. +..+++.. .-+.+|-||||. .++..+
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~-~~d~lv~lGD~vDrGp~s~-~vl~~l~~-----~~~~~i~GNHE~--~ll~~~ 84 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDN-KKDLLISVGDLVDRGAENV-ECLELITF-----PWFRAVRGNHEQ--MMIDGL 84 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCT-TTCEEEECSCCSSSSSCHH-HHHGGGGS-----TTEEECCCHHHH--HHHHHH
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCC-CCCEEEEeCCccccCccHH-HHHHHhhc-----cccccccCcHHH--HHHHHH
Confidence 79999999999999888888775433 4599999999976544322 44556532 347899999973 344443
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.37 E-value=0.0016 Score=64.43 Aligned_cols=114 Identities=14% Similarity=0.025 Sum_probs=61.4
Q ss_pred CCEEEEEcCCCCChH----------HHHHHHHHHhh---hcCCCcEEEEecCCCCCChhh----HHHHHHHhcccCCCCc
Q 008885 3 PPRILLCGDVLGRLN----------QLFKRVQSVNK---SAGPFDAVLCVGQFFPDSSEL----LDEFMNYVEGRSEIPI 65 (550)
Q Consensus 3 ~~KILv~GDvhG~~~----------~l~~kv~~l~~---k~GpfD~li~~GDff~~~~~~----~~~~~~~l~g~~~~p~ 65 (550)
++.||.+.|+||+|. .+...++.+.+ ..++--++|-+||+|...... -....+++ ..+++
T Consensus 8 ~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s~~~~g~~~~~~m---n~~g~ 84 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGM---NLVGY 84 (337)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHHHTTTTHHHHHHH---HHHTC
T ss_pred EEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHHHHHhCChHHHHHH---HhcCC
Confidence 367999999999763 33333444432 234434555599997542110 01112222 22333
Q ss_pred cEEEEecCCCChH--HHHHHhhccccccCcccCCceecCcEEEcC-------CCCeEEEcCeEEEEEeCcc
Q 008885 66 PTYFIGDYGVGAA--KVLLAASKNSANQGFKMDGFKVTDNLFWLK-------GSGNFTLHGLSVAYLSGRQ 127 (550)
Q Consensus 66 ptyfv~GNhe~~~--~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg-------~~gv~~i~GlrIa~lgG~~ 127 (550)
- ..+.||||... +.+..+... .....++.|++.-. ..-|++.+|+||+.+|-..
T Consensus 85 D-a~~~GNHEfd~G~~~l~~~~~~-------~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~ 147 (337)
T d1usha2 85 D-AMAIGNHEFDNPLTVLRQQEKW-------AKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTT 147 (337)
T ss_dssp C-EEECCGGGGSSCHHHHHHHHHH-------CSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEEC
T ss_pred e-EEEechhhhccchHHHHHHHHh-------cCceEeeccccccccccccccceeeeecCCeEEEeecccc
Confidence 3 46679999642 223222111 12346777775433 2235568999999998754
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=96.87 E-value=0.0059 Score=59.81 Aligned_cols=117 Identities=9% Similarity=-0.097 Sum_probs=59.4
Q ss_pred CCEEEEEcCCCCChH----------------HHHHHHHHHhhhcCCCcEEEEecCCCCCChh-----hH-HHHHHHhccc
Q 008885 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-----LL-DEFMNYVEGR 60 (550)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~li~~GDff~~~~~-----~~-~~~~~~l~g~ 60 (550)
+++||.+.|+||.+. .+.+.+++..++.++--++|-+||+|....- .. ....+++
T Consensus 11 ~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~m--- 87 (322)
T d3c9fa2 11 DINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIF--- 87 (322)
T ss_dssp SEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHH---
T ss_pred EEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCChHHHHHH---
Confidence 578999999999653 3344444433334443355569999743110 00 0112222
Q ss_pred CCCCccEEEEecCCCChHH--HHHHhhccccccCcccCCceecCcEEEcCCC----------CeEEEc--CeEEEEEeCc
Q 008885 61 SEIPIPTYFIGDYGVGAAK--VLLAASKNSANQGFKMDGFKVTDNLFWLKGS----------GNFTLH--GLSVAYLSGR 126 (550)
Q Consensus 61 ~~~p~ptyfv~GNhe~~~~--~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~~----------gv~~i~--GlrIa~lgG~ 126 (550)
..+++ -+++.||||.... .+..+...... .+...|+.||.+.... .+++.. +++|+++|-.
T Consensus 88 n~lgy-Da~t~GNHEfd~g~~~l~~~~~~~~~----~~fp~l~aNv~~~~~~~~~~~~~~~y~i~~~~~~~i~i~g~~~~ 162 (322)
T d3c9fa2 88 IKQDY-DLLTIGNHELYLWENSKQEYETVVNH----FQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFL 162 (322)
T ss_dssp TTSCC-SEECCCGGGSSSHHHHHHHHHHHHHH----TTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECC
T ss_pred hccCC-cEEeecceecccchHHHHHHHHHHHh----cCCCEEeeeEEecCCCCcccccCCceEEEEECCCcEEEEEEeec
Confidence 23333 3677799996422 22222110000 1234688888654432 234444 5666666554
Q ss_pred c
Q 008885 127 Q 127 (550)
Q Consensus 127 ~ 127 (550)
.
T Consensus 163 ~ 163 (322)
T d3c9fa2 163 F 163 (322)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=96.83 E-value=0.007 Score=58.70 Aligned_cols=112 Identities=12% Similarity=-0.054 Sum_probs=66.8
Q ss_pred CEEEEEcCCCCChH-----------------HHHHHHHHHhhhcCCCcEEEEecCCCCCChhh----HHHHHHHhcccCC
Q 008885 4 PRILLCGDVLGRLN-----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL----LDEFMNYVEGRSE 62 (550)
Q Consensus 4 ~KILv~GDvhG~~~-----------------~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~----~~~~~~~l~g~~~ 62 (550)
+.||.+.|+||++. ++...++.+.+++ +--++|-+||+|...... -....+.+ ..
T Consensus 3 l~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~-~~~l~ldaGD~~~Gs~~~~~~~g~~~~~~~---n~ 78 (302)
T d2z1aa2 3 LTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARA-KNPLFLDAGDVFQGTLYFNQYRGLADRYFM---HR 78 (302)
T ss_dssp EEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHS-SSEEEEECSCCSSSSHHHHHHTTHHHHHHH---HH
T ss_pred EEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhC-CCeEEEEcCCCCCCCHhHhhhcchhHHHHH---Hh
Confidence 57999999999764 4555566555444 557899999998643210 00111222 12
Q ss_pred CCccEEEEecCCCChH--HHHHHhhccccccCcccCCceecCcEEEcCC---------CCeEEEcCeEEEEEeCcc
Q 008885 63 IPIPTYFIGDYGVGAA--KVLLAASKNSANQGFKMDGFKVTDNLFWLKG---------SGNFTLHGLSVAYLSGRQ 127 (550)
Q Consensus 63 ~p~ptyfv~GNhe~~~--~~l~~l~~~~~~~~~~~~g~ei~~Nl~~Lg~---------~gv~~i~GlrIa~lgG~~ 127 (550)
++ .-..+.||||... ..+..+... .....++.|+.+-.. .-+++.+|+||+.+|-..
T Consensus 79 ~g-yDa~~~GNHEfd~G~~~l~~~~~~-------~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t 146 (302)
T d2z1aa2 79 LR-YRAMALGNHEFDLGPGPLADFLKG-------ARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTT 146 (302)
T ss_dssp TT-CCEEECCGGGGTTCHHHHHHHHTT-------CCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEEC
T ss_pred cc-cccccccchhhhcChhHHHHHhhh-------cccceeEeeeeccccccccCccceeEEEEECCeEEEEEeccc
Confidence 22 2377889998652 233332211 223578899876432 124467899999999763
|
| >d1vlra1 d.13.1.3 (A:146-337) mRNA decapping enzyme DcpS C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: mRNA decapping enzyme DcpS C-terminal domain domain: mRNA decapping enzyme DcpS C-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.73 E-value=0.0016 Score=58.97 Aligned_cols=98 Identities=11% Similarity=0.051 Sum_probs=60.5
Q ss_pred cccCCCCCCCcceEEEECCE---EEEEecC-----CCCCCCeEEEEeccc-cCCCCCCCHHHHHHHHHHHHHHHHHHh-h
Q 008885 392 WFCLSSPSVESHLIVSVGEY---YYCALPK-----GPLVEDHVLVIPVEH-VPNTISTSPECEKELGRFQNSLMMYYK-N 461 (550)
Q Consensus 392 ~FC~~~~~~~~hliis~g~~---~yl~l~k-----gpl~~gH~lIiP~~H-~~s~~~l~~~~~~Ei~~~~~~L~~~~~-~ 461 (550)
.+...+.+.|...|++.+.. -|+.+|. .|+..-|+|+||.+| +.|+.+|.++-..=|.++++..++... .
T Consensus 30 v~nIL~~~~E~e~i~y~D~d~~~gFvllpD~kWd~~~~~~lhlL~I~~r~~I~SlrDL~~ehlpLL~~m~~~~~~~i~~~ 109 (192)
T d1vlra1 30 VYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKR 109 (192)
T ss_dssp HHHHHTC----CCCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCccceeEEeCCCCCCCEEEecccccCCCcccCeEEEEEEccCCCCChHHCCHhHHHHHHHHHHHHHHHHHHH
Confidence 34443445566677777644 3677663 389999999999988 999999977655545454444444332 2
Q ss_pred cCC---c-eEEEeecCCCcCeEEEEEeecCCCc
Q 008885 462 QGK---E-AVFFEWLSKRGTHANLQAVPIPTSK 490 (550)
Q Consensus 462 ~~~---~-~v~~E~~~~~~~H~hi~~vPvp~~~ 490 (550)
+|. + -++|- ......|+|+|++-++.+.
T Consensus 110 ~gi~~~~~Rig~H-~~PSv~HLHlHvi~~~~~~ 141 (192)
T d1vlra1 110 YQVTGDRLRVYLH-YLPSYYHLHVHFTALGFEA 141 (192)
T ss_dssp HCCCGGGEEEEEE-SSCSSSSCEEEEEETTSCC
T ss_pred hCCChhheEEEEE-CCCCEeeeEEEEEeccCCC
Confidence 232 1 24454 3445789999999886553
|
| >d1z84a1 d.13.1.2 (A:23-195) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: Hexose-1-phosphate uridylyltransferase domain: Galactose-1-phosphate uridylyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.36 E-value=0.011 Score=52.56 Aligned_cols=100 Identities=13% Similarity=0.160 Sum_probs=63.5
Q ss_pred CCCCcccCCCCCCCcceEEEECC-----EEEEEecCCCCC---------------------CC-e-EEEEeccccCCCCC
Q 008885 388 SKECWFCLSSPSVESHLIVSVGE-----YYYCALPKGPLV---------------------ED-H-VLVIPVEHVPNTIS 439 (550)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~-----~~yl~l~kgpl~---------------------~g-H-~lIiP~~H~~s~~~ 439 (550)
...|.||-.|......-+..+.+ .++++-+++|.. -| | ++|---.|..++.+
T Consensus 38 ~~~CPfCpGne~~~~~~~~~~~~~~~~w~vrv~~N~fPal~~~~~~~~~~~~~~~~~~~~~~G~heVIi~sp~H~~~l~~ 117 (173)
T d1z84a1 38 PSSCPFCIGREQECAPELFRVPDHDPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVHSIQLSD 117 (173)
T ss_dssp -CCCTTSTTCGGGSSCEEEEESTTCSSCSEEEEECSSCSSBGGGTTTC--------CEEECBCEEEEEECCSSSSCCGGG
T ss_pred cccCCCCCCCcccCCCcceeccccCCCceEEEeCCCCcccccccccccccCcCcceeecccccceeeEEeCccccCChhh
Confidence 45799998875433333333322 466777778742 12 3 44447799999999
Q ss_pred CCHHHHHHHHH-HHHHHHHHHhhcCC-ceEEEeec----CCCcCeEEEEEeecC
Q 008885 440 TSPECEKELGR-FQNSLMMYYKNQGK-EAVFFEWL----SKRGTHANLQAVPIP 487 (550)
Q Consensus 440 l~~~~~~Ei~~-~~~~L~~~~~~~~~-~~v~~E~~----~~~~~H~hi~~vPvp 487 (550)
++.+.+..+.+ +++.++.+.+..+. -|.+||+. .-...|-|.|++-.|
T Consensus 118 ~~~e~i~~v~~~~~~r~~~l~~~~~i~yV~iF~N~G~~aGaSl~HPH~QI~a~p 171 (173)
T d1z84a1 118 IDPVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALP 171 (173)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEEES
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCceEEEEEeecCccCccCCCCCCeeeeeec
Confidence 99887777764 66667766554443 46678822 122579999998765
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.27 E-value=0.0032 Score=61.84 Aligned_cols=69 Identities=17% Similarity=0.284 Sum_probs=48.3
Q ss_pred EEEEEcCCCCChHHHHHHHHHHhhhcC-CC--cEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 5 RILLCGDVLGRLNQLFKRVQSVNKSAG-PF--DAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~G-pf--D~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
.|.||||+||+|..|+.-++. .| |. .-.|.+||+..-++...+.+.-++.=+...|--+|.+-||||..
T Consensus 61 pv~VvGDiHGq~~DL~~if~~----~g~p~~~~~ylFLGDYVDRG~~slEvi~lL~~lKi~yP~~v~LLRGNHE~~ 132 (324)
T d1s95a_ 61 KITVCGDTHGQFYDLLNIFEL----NGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETD 132 (324)
T ss_dssp EEEEECCCTTCHHHHHHHHHH----HCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CEEEEEECCCCHHHHHHHHHH----CCCCCCCCeEEEecccccCcCcceeehHHHHHHHHhCCCcEEeccCCcccc
Confidence 789999999999998755442 33 32 24788999987655555544433332345677799999999974
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.92 E-value=0.0041 Score=60.12 Aligned_cols=71 Identities=14% Similarity=0.213 Sum_probs=49.5
Q ss_pred EEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
.|.|+||+||++..|+..++... ..+-.-.|.+||+..-++...+.+.-++.=+...|--+|.+-||||..
T Consensus 46 pv~VvGDlHG~~~DL~~if~~~g--~p~~~~ylFLGDYVDRG~~slEvl~lL~alKi~~P~~v~lLRGNHE~~ 116 (288)
T d3c5wc1 46 PVTVCGDVHGQFHDLMELFRIGG--KSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESR 116 (288)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHC--CTTTSCEEECSCCCCSSSSHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred CeEEEeeCCCCHHHHHHHHHhcC--CCccceEEecCcccCCCCcceeHHHHHHHHHhhCCCeEEEeccCCccc
Confidence 58999999999999886665422 123345788999976555445444444332356777799999999975
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=95.87 E-value=0.0043 Score=60.12 Aligned_cols=72 Identities=15% Similarity=0.294 Sum_probs=49.0
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
..|.|+||+||++..|+.-++..- ..+-.-.|.+||+..-++...+.+.-++.=+...|--+|.+-||||.+
T Consensus 52 ~pv~VvGDiHG~~~DL~~if~~~g--~p~~~~ylFLGDYVDRG~~slE~i~lL~aLKi~~P~~v~lLRGNHE~~ 123 (294)
T d1jk7a_ 52 APLKICGDIHGQYYDLLRLFEYGG--FPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 123 (294)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHC--CTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CCeEEEEECCCChHhHHHHHhhcC--CCccceEEeeccccCCCccchHHHHHHHHHHhhCCCeEEEecCCcccc
Confidence 358999999999999876554321 114456788999976555445444333332355777799999999975
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.60 E-value=0.0056 Score=62.70 Aligned_cols=71 Identities=13% Similarity=0.202 Sum_probs=47.8
Q ss_pred EEEEEcCCCCChHHHHHHHHHHhhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 5 KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~li~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
-|.||||+||+|..|+.-++..-. .+-.-.|.+||+..-++...+.+.-++.-+...|-.+|.+-||||..
T Consensus 71 Pv~VvGDIHGq~~DLl~If~~~G~--P~~~~yLFLGDYVDRG~~SlEvlllL~aLKi~yP~~V~LLRGNHE~~ 141 (473)
T d1auia_ 71 PVTVCGDIHGQFFDLMKLFEVGGS--PANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 141 (473)
T ss_dssp SEEEECCCTTCHHHHHHHHHHHCC--TTTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCC--CCcceEEecCccccCCcccHHHHHHHHHHHHhCCCeEEEeCCCCccH
Confidence 489999999999998765543211 12345678899976554444444433333355677799999999964
|
| >d1guqa1 d.13.1.2 (A:2-177) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: HIT-like superfamily: HIT-like family: Hexose-1-phosphate uridylyltransferase domain: Galactose-1-phosphate uridylyltransferase species: Escherichia coli [TaxId: 562]
Probab=93.28 E-value=0.29 Score=43.14 Aligned_cols=97 Identities=14% Similarity=0.089 Sum_probs=56.1
Q ss_pred CCCcccCCCCCCCcceEEEECCEEEEEecCCC-CC-------------------CC-eEEEE-eccccCCCCCCCHHHHH
Q 008885 389 KECWFCLSSPSVESHLIVSVGEYYYCALPKGP-LV-------------------ED-HVLVI-PVEHVPNTISTSPECEK 446 (550)
Q Consensus 389 ~~C~FC~~~~~~~~hliis~g~~~yl~l~kgp-l~-------------------~g-H~lIi-P~~H~~s~~~l~~~~~~ 446 (550)
..|.||-.|....... ..-+-.++++-+++| |. -| |-+|| --.|..++.+++.+.+.
T Consensus 49 ~~CPfCpgn~~~~~~~-~~~~~~vrv~~N~~pal~~~~~~~~~~~~~l~~~~~~~G~heVIi~sp~H~~~l~~~~~~~i~ 127 (176)
T d1guqa1 49 PDCFLCAGNVRVTGDK-NPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPELSVAALT 127 (176)
T ss_dssp TTCTTSTTCBCTTSCB-CCCCSSCEEEECTTCSCCTTCCCCCCCCCSSSCEEECCEEEEEEESCSCTTCCGGGSCHHHHH
T ss_pred CCCCCCCCcccccccC-CCCccceeeecCCCcccccCcccccccCCcccccCCCCCceeEEEECcccccChhhCCHHHHH
Confidence 4699998763321111 111233556656655 21 12 55555 88999999999988777
Q ss_pred HHHH-HHHHHHHHHhhcCCceEEEeec----CCCcCeEEEEEeecC
Q 008885 447 ELGR-FQNSLMMYYKNQGKEAVFFEWL----SKRGTHANLQAVPIP 487 (550)
Q Consensus 447 Ei~~-~~~~L~~~~~~~~~~~v~~E~~----~~~~~H~hi~~vPvp 487 (550)
.+.. +++.+.++-+...+ +.+||+. .-...|-|.|++-.|
T Consensus 128 ~vl~a~~~R~~~l~~~i~y-v~iFkN~G~~aGaSl~HPH~QI~a~p 172 (176)
T d1guqa1 128 EIVKTWQEQTAELGKTYPW-VQVFENKGAAMGCSNPHPGGQIWANS 172 (176)
T ss_dssp HHHHHHHHHHHHHHHHCSE-EEEEEEESGGGTCSCCSSEEEEEEES
T ss_pred HHHHHHHHHHHHhcCCCCE-EEEEeecCccccCCCCCCCeeeeecC
Confidence 7654 55555554333344 4567722 112468888887654
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=91.80 E-value=0.084 Score=49.96 Aligned_cols=76 Identities=16% Similarity=0.098 Sum_probs=51.4
Q ss_pred CC-CCEEEEEcCCCCC--hHHHHHHHHHHhhhcCCCcEEEEecCC----CCCChhhHHHHHHHhcccCCCCccEEEEecC
Q 008885 1 MS-PPRILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQF----FPDSSELLDEFMNYVEGRSEIPIPTYFIGDY 73 (550)
Q Consensus 1 M~-~~KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~li~~GDf----f~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN 73 (550)
|. .||||++||+-|+ .+.+.+.|..|.++.+ .|+||+=|.- ++...+. ..+++.-... +++.||
T Consensus 1 m~~~MkILfiGDIvG~~GR~~v~~~Lp~Lr~~~~-iDfVIaNgENaa~G~Git~k~---~~eL~~~GvD-----vIT~GN 71 (281)
T d1t71a_ 1 MMNSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQ-ADLVIVNAENTTHGKGLSLKH---YEFLKEAGVN-----YITMGN 71 (281)
T ss_dssp CCCCCEEEEECEEBHHHHHHHHHTTHHHHHHHHT-CSEEEEECTBTTTTSSCCHHH---HHHHHHHTCC-----EEECCT
T ss_pred CCccceEEEEEccCCHHHHHHHHHHhHHHHHHhC-CCEEEECCccCCCCcCCCHHH---HHHHHHhCCc-----EEEcCc
Confidence 56 8999999999997 4556666777777774 7999999985 3333333 3344321122 678999
Q ss_pred CC-ChHHHHHHhh
Q 008885 74 GV-GAAKVLLAAS 85 (550)
Q Consensus 74 he-~~~~~l~~l~ 85 (550)
|- +..++++.+.
T Consensus 72 H~wd~kei~~~i~ 84 (281)
T d1t71a_ 72 HTWFQKLDLAVVI 84 (281)
T ss_dssp TTTCCGGGHHHHT
T ss_pred hhhhchhhHHHHh
Confidence 96 4455666664
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=85.71 E-value=0.72 Score=42.73 Aligned_cols=71 Identities=18% Similarity=0.221 Sum_probs=45.0
Q ss_pred CEEEEEcCCCCC--hHHHHHHHHHHhhhcCCCcEEEEecCC----CCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 4 PRILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQF----FPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 4 ~KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~li~~GDf----f~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
||||++||+-|+ .+.+.+.|..|.++ +|+||+=|.- ++.....-++|.++ | .. +++.|||--+
T Consensus 1 MkILfiGDIvG~~Gr~~v~~~Lp~lk~~---~DfVIaNgENaa~G~Git~~~~~~l~~~--G-vD-----viT~GNH~wd 69 (255)
T d1t70a_ 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQ---FDFVIVNMENSAGGFGMHRDAARGALEA--G-AG-----CLTLGNHAWH 69 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGG---CSEEEEECTBTTTTSSCCHHHHHHHHHH--T-CS-----EEECCTTTTS
T ss_pred CeEEEEecCCCHHHHHHHHHHhHHHHhh---CCEEEECCccCCCCcCCCHHHHHHHHHc--C-Cc-----EEEcCchhhc
Confidence 899999999997 34455667776443 6999999985 34433333333332 2 22 5789999543
Q ss_pred -HHHHHHhh
Q 008885 78 -AKVLLAAS 85 (550)
Q Consensus 78 -~~~l~~l~ 85 (550)
.++++.+.
T Consensus 70 kkei~~~i~ 78 (255)
T d1t70a_ 70 HKDIYPMLS 78 (255)
T ss_dssp STTHHHHHH
T ss_pred chhHHHHHh
Confidence 34555553
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=83.87 E-value=1.1 Score=41.18 Aligned_cols=63 Identities=16% Similarity=0.183 Sum_probs=40.8
Q ss_pred CEEEEEcCCCCC--hHHHHHHHHHHhhhcCCCcEEEEecCC----CCCChhhHHHHHHHhcccCCCCccEEEEecCCCCh
Q 008885 4 PRILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQF----FPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (550)
Q Consensus 4 ~KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~li~~GDf----f~~~~~~~~~~~~~l~g~~~~p~ptyfv~GNhe~~ 77 (550)
||||++||+-|+ .+.+.+.|..|.++ +|+||+=|.= ++...+ ...++++-... +++.|||--+
T Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~Lk~~---~DfVIaNgENaa~G~Git~k---~~~~L~~~GVD-----vIT~GNH~wd 69 (252)
T d2z06a1 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDR---YDLVIANGENAARGKGLDRR---SYRLLREAGVD-----LVSLGNHAWD 69 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGG---CSEEEEECTTTTTTSSCCHH---HHHHHHHHTCC-----EEECCTTTTS
T ss_pred CeEEEEeccCCHHHHHHHHHHhHHHHhh---CCEEEEeeeccCCCcCCCHH---HHHHHHHhCCC-----EEEcCccccc
Confidence 899999999996 45556667766443 6999998874 333333 23444321122 5789999654
|