Citrus Sinensis ID: 008907

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------55
Protein Sequence
MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEQVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccEEEEEEEEEEEccccccccccccEEEEEccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccHHHHHcccccccccccEEEEEEEEEEcccEEccccccccccccccEEEEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccHHHHHHHHHHHHHccccccEEEEEEEEEEcccccccccHccccccccEEEEEccccccccccccccccccccEEEEcccccEEcccccEEEEEEEEEEEcccccccccccEEEEEEEcccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccEEEccccccccccEEEEEEEEEEccEEEccccccccccccccEEEEEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEcc
Coil and Loop (DISEMBL)
mgrefastslapgfrfhptdEELVRYYLKRKVchrslrfnpicvtdiyksepwdlpdksslktrdkEWYFFSMLdkkygngsrtnratekgywkttgkdrpvhhntrtvgMKKTLVYhmgraphgertnwVMHEYRLtdddlekagvaQDTFVLCRIFqksgsgpkngeqygapfieeeweddeavdaalvpghdvvadelvvsddayfetndldqnidvanqsenaprhlnfyhgessnhvehsrdlspdnqkpmigvgatqhnselmdarpvkdeyidssngvnaggvnyflnepyldatdnpqfsdglyleandlsstveadsqgFDMVEEYLNFfdanddnseyltfdaseilgsgdnnsdqvpltteqvtEVTDQMSMAGQHQvevhgndvastseqkpdivksesdvkypFLKQASQMLGNvaaapafasefptkDAALRLnslahpsssvhvtAGMIRIRNItlsgsgldwsvgkngdmnIVFSFdlsqnvispsptsfepagnifsgktgSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Flexible Loop (DISEMBL)
mgrefastslapgfrfhptdEELVRYYLKRkvchrslrfnpicvtdiyksepwdlpdksslktrdkEWYFFSMldkkygngsrtnratekgywkttgkdrpvhhntrtvgmkktlVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIfqksgsgpkngeqYGAPFIEEEWEDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILgsgdnnsdqvpLTTEQVTEVTDQMSMAGQHQVEVHGndvastseqkpdivkseSDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Low Complexity Region (SEG)
MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIeeeweddeavdaaLVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEQVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGsvvfrslwlllflwiiilsvGFKIGACVSAK
Disordered region (IsUnstruct)
************GFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPD***LKTRDKEWYFFSMLDKKYGN*********KGYWKTTGK*RPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQK**********YGAPFIEEEWEDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNI****************************************************************NGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLS*TVEADSQGFDMVEEYLNFFDANDDNSEYLTFDA***************************************************************F*******LGNVAAAPAFA********ALRLN*L*****SVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVIS*****FEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACV***
Disordered Region (DISOPRED)
************GFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRL*************TFVLCRIFQ**************************************************************************************************************************************************QFSDGLYLEANDL***********DMVEEYLNFFDANDDNSEYLTFDA*******************QVTEV********************************************SQMLGNVAAAPA*****************************MIRIRNIT*******WSVGKNGDMNIVFSFDL*****************IFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Disordered Region (DISEMBL)
MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGE*************DNQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEQVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Disordered Region (DISPRO)
********SLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSG****************************************************DQNIDVANQSENAPRHLNFYH*ES*************NQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTE***************************************DVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQN****************SGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPMIGVGATQHNSELMDARPVKDEYIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEQVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	549	2.2.26 [Sep-21-2011]
Q84K00	567	NAC domain-containing pro	yes	no	0.956	0.925	0.478	1e-136
Q7GCL7	489	NAC domain-containing pro	no	no	0.433	0.486	0.405	5e-46
Q9SV87	341	Protein BEARSKIN1 OS=Arab	no	no	0.275	0.442	0.513	9e-45
Q9FLJ2	336	NAC domain-containing pro	no	no	0.291	0.476	0.529	2e-44
Q39013	289	NAC domain-containing pro	no	no	0.357	0.678	0.447	4e-43
Q52QH4	318	NAC domain-containing pro	no	no	0.278	0.481	0.527	9e-43
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.265	0.478	0.506	2e-42
Q5Z6B6	276	NAC domain-containing pro	no	no	0.278	0.554	0.506	2e-42
Q9MA17	371	Protein SOMBRERO OS=Arabi	no	no	0.271	0.401	0.506	5e-42
Q8H4S4	425	NAC transcription factor	no	no	0.287	0.371	0.462	2e-41

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score =  484 bits (1245), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 283/591 (47%), Positives = 367/591 (62%), Gaps = 66/591 (11%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGR  + TSLAPGFRFHPTDEELVRYYLKRKVC++  +F+ I VTDIYKSEPWDLPDKS 
Sbjct: 1   MGRG-SVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFSMLDKKY NGS+TNRATEKGYWKTTGKDR + + +R VGMKKTLVYH G
Sbjct: 60  LKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEW 180
           RAP GERTNWVMHEYRL+D+DL+KAGV Q+ +VLCRIFQKSG+GPKNGEQYGAP++EEEW
Sbjct: 120 RAPRGERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGPKNGEQYGAPYLEEEW 179

Query: 181 EDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSN 240
           E+D       VP  D  ++ L ++DD Y + +D+D+  +     +  P   N+ HGESSN
Sbjct: 180 EED---GMTYVPAQDAFSEGLALNDDVYVDIDDIDEKPENLVVYDAVPILPNYCHGESSN 236

Query: 241 HVE------HSRDLSPDN-------------------QKPMIGVGATQHNSELMDAR--- 272
           +VE          + P N                   +KP+I  G+ Q  S   + +   
Sbjct: 237 NVESGNYSDSGNYIQPGNNVVDSGGYFEQPIETFEEDRKPIIREGSIQPCSLFPEEQIGC 296

Query: 273 PVKDEYI----DSSNGVNAGGV---------NYFLNEPYLDATDNPQFSDGLYLEANDLS 319
            V+DE +     S+N V              NY  +EP++D  +N   +DGLYLE NDLS
Sbjct: 297 GVQDENVVNLESSNNNVFVADTCYSDIPIDHNYLPDEPFMDPNNNLPLNDGLYLETNDLS 356

Query: 320 STVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEQVTEVTD 379
              + D       E+YL+FFD      E LTFD S ++G  D   +Q  L  +   +  +
Sbjct: 357 CAQQDDFN----FEDYLSFFD-----DEGLTFDDSLLMGPEDFLPNQEALDQKPAPKELE 407

Query: 380 QMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFP 439
           +    G+  VE   +   S+S+Q  D    +S  KYPFLK+ S MLG +    +FAS+F 
Sbjct: 408 KEVAGGKEAVEEKESGEGSSSKQDTDFKDFDSAPKYPFLKKTSHMLGAIPTPSSFASQFQ 467

Query: 440 TKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSG-SGLDWSVGKNGDMNIVFSFDLSQNV 498
           TKD A+RL++ A  S SVHVTAGM+RI N+TL+  SG+ WS  KNG++N+V SF + Q  
Sbjct: 468 TKD-AMRLHA-AQSSGSVHVTAGMMRISNMTLAADSGMGWSYDKNGNLNVVLSFGVVQQ- 524

Query: 499 ISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK 549
                   + A      KTG    R++ + + LW+++LSV FKI   VSA+
Sbjct: 525 --------DDAMTASGSKTGITATRAMLVFMCLWVLLLSVSFKIVTMVSAR 567

Arabidopsis thaliana (taxid: 3702)

>sp|Q7GCL7|NAC74_ORYSJ NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1

 Score =  186 bits (471), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 105/259 (40%), Positives = 143/259 (55%), Gaps = 21/259 (8%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWY 69
           L PGF FHP D EL+ +YLK+K+  + + +  I   DIYK EPWDLP K  + T+D +W+
Sbjct: 9   LPPGFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWH 68

Query: 70  FFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTN 129
           FF+  D+KY NGSR+NRAT  GYWK+TGKDR +    +T+G KKTLV+H GR P G RT 
Sbjct: 69  FFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGRRTE 128

Query: 130 WVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNG----------EQYGAPFIEEE 179
           W+MHEY + + + +     +D +VLCRI +++   P NG          E Y AP     
Sbjct: 129 WIMHEYYIDERECQACPDMKDAYVLCRITKRNDWIPGNGNELDNSDPHPEPYDAP---PS 185

Query: 180 WEDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLN-----FY 234
               E ++ A  P   V A  + V++     T+ +  NI   +   N    LN     F+
Sbjct: 186 VISTEQLNPAAEPVVGVEAAPVTVAEPDGVTTSAITANIPSPSDDINLDDWLNELFDPFF 245

Query: 235 HGESSNHVEHSRDLSPDNQ 253
             E S     S DLSPD Q
Sbjct: 246 DPEQS---LASADLSPDEQ 261

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SV87|BRN2_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1

 Score =  181 bits (460), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 78/152 (51%), Positives = 110/152 (72%), Gaps = 1/152 (0%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSL-KTRDKEW 68
           + PGFRFHPTDEEL+ YYLK+K+ ++      I   D+ K EPWDL ++  +  T   EW
Sbjct: 9   VPPGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERCKIGSTPQNEW 68

Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERT 128
           YFFS  D+KY  GSRTNRAT  G+WK TG+D+ + ++ + +GM+KTLV++ GRAPHG++T
Sbjct: 69  YFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKT 128

Query: 129 NWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQK 160
           +W+MHEYRL D D  +A  ++D +V+CR+F K
Sbjct: 129 DWIMHEYRLEDADDPQANPSEDGWVVCRVFMK 160

Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score =  181 bits (458), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 89/168 (52%), Positives = 113/168 (67%), Gaps = 8/168 (4%)

Query: 3   REFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLK 62
           +E     L PGFRFHPTDEEL+ +YL +KV   S     I   D+ KSEPW+LP  +  K
Sbjct: 9   KEEEQMDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMA--K 66

Query: 63  TRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRA 122
             +KEWYFF + D+KY  G RTNRATE GYWK TGKD+ ++     VGMKKTLV++ GRA
Sbjct: 67  MGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRA 126

Query: 123 PHGERTNWVMHEYRL----TDDDLEKAGVAQDTFVLCRIFQKSGSGPK 166
           P G++TNWVMHEYRL    +  +L K   A++ +V+CR+FQKS  G K
Sbjct: 127 PKGQKTNWVMHEYRLEGKFSAHNLPK--TAKNEWVICRVFQKSAGGKK 172

Arabidopsis thaliana (taxid: 3702)

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score =  176 bits (446), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 93/208 (44%), Positives = 125/208 (60%), Gaps = 12/208 (5%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWY 69
           L PGFRFHPTDEELV +YL RK   +S+    I   D+YK +PW+LP  +     +KEWY
Sbjct: 7   LPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYG--EKEWY 64

Query: 70  FFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTN 129
           FFS  D+KY NGSR NR+   GYWK TG D+P+    + VG+KK LV++ G+AP GE+TN
Sbjct: 65  FFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGL-PKPVGIKKALVFYAGKAPKGEKTN 123

Query: 130 WVMHEYRLTDDDL----EKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEA 185
           W+MHEYRL D D     +K  +  D +VLCRI+ K G+  + G      + +E  E+   
Sbjct: 124 WIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGPPPPVVYGDEIMEEKPK 183

Query: 186 VDAALVPGHDVVADELVVSDDAYFETND 213
           V   ++P       E      AYF+T+D
Sbjct: 184 VTEMVMPPPPQQTSEF-----AYFDTSD 206

Arabidopsis thaliana (taxid: 3702)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  175 bits (443), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 85/161 (52%), Positives = 108/161 (67%), Gaps = 8/161 (4%)

Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
           A  +L PGFRFHPTDEELV +YL RKV  + L    I   D+YK +PWDLP+K+      
Sbjct: 17  AELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGR-- 74

Query: 66  KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPV--HHNTRTVGMKKTLVYHMGRAP 123
           KEWYFF+  D+KY NGSR NRA  +GYWK TG D+PV    + RTVG+KK LV++ G+AP
Sbjct: 75  KEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAP 134

Query: 124 HGERTNWVMHEYRLTDDDL----EKAGVAQDTFVLCRIFQK 160
            G +T+W+MHEYRL D D     +K     D +VLCR++ K
Sbjct: 135 RGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNK 175

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score =  174 bits (441), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 78/154 (50%), Positives = 109/154 (70%), Gaps = 8/154 (5%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSL-KTRDKEW 68
           + PGFRFHPTDEEL+ YYLK+K+ +       I   D+ K EPWDL D+  +  T   EW
Sbjct: 8   VPPGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWDLQDRCKIGSTPQNEW 67

Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERT 128
           YFFS  D+KY  GSRTNRAT  G+WK TG+D+ + ++ + +GM+KTLV++ GRAPHG++T
Sbjct: 68  YFFSHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKT 127

Query: 129 NWVMHEYRL--TDDDLEKAGVAQDTFVLCRIFQK 160
           +W+MHEYR+  T+DD       +D +V+CR+F+K
Sbjct: 128 DWIMHEYRIEDTEDD-----PCEDGWVVCRVFKK 156

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5Z6B6|NAC76_ORYSJ NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2

 Score =  174 bits (441), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 80/158 (50%), Positives = 114/158 (72%), Gaps = 5/158 (3%)

Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
            + S+ PGFRFHPTDEEL+ YYL++KV + ++  + I   D+ K EPWDL D+  + T  
Sbjct: 6   GALSVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGP 65

Query: 66  K-EWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVH-HNTRTVGMKKTLVYHMGRAP 123
           + EWYFFS  DKKY  G+RTNRAT  G+WK TG+D+ +   N   +GM+KTLV+++GRAP
Sbjct: 66  QNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAP 125

Query: 124 HGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKS 161
           HG++T+W+MHEYRL  D+++   V +D +V+CR+F K 
Sbjct: 126 HGKKTDWIMHEYRLDQDNVD---VQEDGWVVCRVFMKK 160

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9MA17|SMB_ARATH Protein SOMBRERO OS=Arabidopsis thaliana GN=SMB PE=1 SV=1

 Score =  172 bits (437), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 78/154 (50%), Positives = 113/154 (73%), Gaps = 5/154 (3%)

Query: 9   SLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDK-E 67
           S+ PGFRFHPT+EEL+ YYLK+KV +  +  + I   D+ K EPW+L +K  + +  + E
Sbjct: 16  SVPPGFRFHPTEEELLYYYLKKKVSYEPIDLDVIREVDLNKLEPWELKEKCRIGSGPQNE 75

Query: 68  WYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHN-TRTVGMKKTLVYHMGRAPHGE 126
           WYFFS  DKKY  G+RTNRAT  G+WK TG+D+ +H N ++ +G++KTLV++ GRAPHG+
Sbjct: 76  WYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKSIHLNSSKKIGLRKTLVFYTGRAPHGQ 135

Query: 127 RTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQK 160
           +T W+MHEYRL D + E   + +D +V+CR+F+K
Sbjct: 136 KTEWIMHEYRLDDSENE---IQEDGWVVCRVFKK 166

Transcription regulator. Together with BRN1 and BRN2, regulates cellular maturation of root cap. Represses stem cell-like divisions in the root cap daughter cells, and thus promotes daughter cell fate. Inhibits expression of its positive regulator FEZ in a feedback loop for controlled switches in cell division plane. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  171 bits (432), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 86/186 (46%), Positives = 113/186 (60%), Gaps = 28/186 (15%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWY 69
           L PGFRFHPTDEELV +YLK+K     L    I   D+YK +PWDLP+K++    ++EWY
Sbjct: 29  LPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLPEKANFG--EQEWY 86

Query: 70  FFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRT---VGMKKTLVYHMGRAPHGE 126
           FFS  D+KY NG+R NRA   GYWK TG D+P+  +  T   VG+KK LV++ G+ P G 
Sbjct: 87  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGKPPKGV 146

Query: 127 RTNWVMHEYRLTDDDLEKAGVAQ--------------------DTFVLCRIFQKS---GS 163
           +TNW+MHEYRLTD     A VA                     D +VLCRI++K+   G+
Sbjct: 147 KTNWIMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVLCRIYKKTNKAGA 206

Query: 164 GPKNGE 169
           G ++ E
Sbjct: 207 GQRSME 212

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	549
255583748	514	conserved hypothetical protein [Ricinus	0.888	0.949	0.590	1e-179
224109872	551	NAC domain protein, IPR003441 [Populus t	0.961	0.958	0.578	1e-175
224100709	565	NAC domain protein, IPR003441 [Populus t	0.952	0.925	0.553	1e-170
359486687	559	PREDICTED: NAC domain-containing protein	0.989	0.971	0.550	1e-169
302399033	607	NAC domain class transcription factor [M	0.972	0.879	0.525	1e-164
147802301	573	hypothetical protein VITISV_021988 [Viti	0.967	0.926	0.553	1e-163
449532398	566	PREDICTED: NAC domain-containing protein	0.974	0.945	0.524	1e-152
449449383	524	PREDICTED: NAC domain-containing protein	0.890	0.933	0.554	1e-146
449465328	555	PREDICTED: NAC domain-containing protein	0.965	0.954	0.540	1e-143
297806417	568	hypothetical protein ARALYDRAFT_908325 [	0.958	0.926	0.482	1e-134

>gi|255583748|ref|XP_002532627.1| conserved hypothetical protein [Ricinus communis] gi|223527647|gb|EEF29758.1| conserved hypothetical protein [Ricinus communis]

 Score =  636 bits (1640), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 333/564 (59%), Positives = 402/564 (71%), Gaps = 76/564 (13%)

Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
           ++ SLAPGFRFHPTDEELVRYYLKRKV ++  RF+ I V DIYK+EPWDLPDKS LKTRD
Sbjct: 7   SAASLAPGFRFHPTDEELVRYYLKRKVTNKPFRFDAIAVVDIYKTEPWDLPDKSKLKTRD 66

Query: 66  KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
            EWYFFSMLDKKYGNGS+TNRATEKGYWKTTGKDRPV  N+R VGMKKTLVYH+GRAP G
Sbjct: 67  LEWYFFSMLDKKYGNGSKTNRATEKGYWKTTGKDRPVRWNSRNVGMKKTLVYHLGRAPRG 126

Query: 126 ERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEA 185
           ERTNWVMHEYRLTD+DLEKAG+ QD FVLCRIFQKSG+GPKNGEQYGAPF+EEEW++D+ 
Sbjct: 127 ERTNWVMHEYRLTDEDLEKAGIVQDAFVLCRIFQKSGTGPKNGEQYGAPFVEEEWDNDDE 186

Query: 186 VDAALVPGHDVV-ADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEH 244
           V   L+PG ++V  DELV+ DDAY ETNDLDQN DVA  S+NA   +NFYHGE+SN+VE 
Sbjct: 187 V--VLLPGEEMVMTDELVLGDDAYGETNDLDQNFDVAVVSDNAALPVNFYHGETSNYVEQ 244

Query: 245 SRDLSPDNQKPMIGVGATQHNSEL--------------MDARPVKDEYI-DSSNGVNAGG 289
           S + S D++KP+I  G  Q+ S+L              +DA+ V+ EYI +SSN V+A  
Sbjct: 245 SGNSSGDDKKPVIDRGGAQYCSDLPDDKVLFSFPEQYEIDAKSVRHEYIAESSNNVDATD 304

Query: 290 VNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQG----FDMVEEYLNFFDANDDN 345
            NY L+EP+LDATDNP F++GL+LEANDLS+ VE ++ G    F+MV+EYLNFFDANDDN
Sbjct: 305 DNYLLDEPFLDATDNPPFNEGLFLEANDLSNPVEPETAGDSTIFEMVDEYLNFFDANDDN 364

Query: 346 SEYLTFDASEILGSGDNNSDQVPLTTEQVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPD 405
              LTFD SEILGS +  SD   L+                                   
Sbjct: 365 ---LTFDPSEILGSENIVSDGASLS----------------------------------- 386

Query: 406 IVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIR 465
                        ++AS MLG++ A PAFASEFP K  AL+LN  A  SSS+ VTAGMIR
Sbjct: 387 -------------EKASHMLGSIPAPPAFASEFPLKGTALQLNG-APSSSSIRVTAGMIR 432

Query: 466 IRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSL 525
           I +IT    G+DWS GKNG++NIV SF +SQ  +SP+ ++  PAGN FSGKT S+V R  
Sbjct: 433 IESITFGSDGMDWSFGKNGNVNIVLSFVMSQGNVSPAGSA--PAGNSFSGKTWSLVSRGW 490

Query: 526 WLLLFLWIIILSVGFKIGACVSAK 549
           + L+F W++ILSV +KIG  +S K
Sbjct: 491 FFLMFFWVLILSVSYKIGTYISTK 514

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109872|ref|XP_002315338.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222864378|gb|EEF01509.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  621 bits (1601), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 328/567 (57%), Positives = 399/567 (70%), Gaps = 39/567 (6%)

Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
           ++TSLAPGFRFHPTDEELVRYYLKRKV ++  R + I VTD+YKSEPWDLP KS LK+RD
Sbjct: 1   SATSLAPGFRFHPTDEELVRYYLKRKVTNKPFRLDAISVTDVYKSEPWDLPVKSKLKSRD 60

Query: 66  KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
            EWYFFSMLDKKYGNG++TNRATEKGYWKTTGKDRP++ N+R VGMKKTLVYH GRAP G
Sbjct: 61  LEWYFFSMLDKKYGNGAKTNRATEKGYWKTTGKDRPINWNSRVVGMKKTLVYHQGRAPRG 120

Query: 126 ERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEA 185
           ER+NWVMHEYRL D++LEKAG+AQD FVLCRIFQKSG+GPKNGEQYGAPFIEEEWE+DE 
Sbjct: 121 ERSNWVMHEYRLADEELEKAGIAQDAFVLCRIFQKSGTGPKNGEQYGAPFIEEEWENDE- 179

Query: 186 VDAALVPGHDVV-ADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSNHVEH 244
               L+P  ++V A E  V D +Y E N+LDQN D    SEN    LNFY+GE+SNHVE 
Sbjct: 180 --VPLLPSEEMVPAGEAPVGDGSYLELNELDQNFDSGITSENTALPLNFYYGETSNHVEQ 237

Query: 245 SRDLSPDNQKPMIGVGATQHNSEL--------------MDARPVKDEYIDSSNGVNAGGV 290
             + S ++ KP+I  GA   N                 MDA   K+   +  N VNA   
Sbjct: 238 PSNFSDNDIKPVI-RGAENRNGPAPPADQNLDLPGQYEMDAD-KKEHNAEPINIVNALNA 295

Query: 291 NYFLNEPYLDATDNPQFSDGLYLEANDLSSTVE----ADSQGFDMVEEYLNFFDANDDNS 346
           NY  +E YLDA  +   S+G +LEANDLS  VE     DS GFDMV+EYLNFFDA D+N 
Sbjct: 296 NYLFDESYLDALGDLPPSEGFFLEANDLSKPVEPETGGDSSGFDMVDEYLNFFDAVDEN- 354

Query: 347 EYLTFDASEILGSGDNNSDQVPLTTEQVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDI 406
             ++FD S+I GS    SDQ+P   E V   T+++S A  + +E HG    S+S+QKP+ 
Sbjct: 355 --MSFDPSDIFGSETAVSDQLP-PQEDVKGQTEELSTASLNLLETHGTIDPSSSKQKPEA 411

Query: 407 VK--SESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHP--SSSVHVTAG 462
           +K  S +D KYPF+KQAS  LGN+ A PA ASEFP+KDAAL L    HP  SSS++VTAG
Sbjct: 412 MKFDSGADFKYPFIKQASHRLGNIPAPPALASEFPSKDAALHL----HPASSSSINVTAG 467

Query: 463 MIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVF 522
           MIRI N++L G+ ++WS GKNG++NI+ SF L Q      P S  P  ++F GKT SVV 
Sbjct: 468 MIRIENMSLGGNEMEWSFGKNGNVNIILSFGLPQQG---GPASLVPMNSLFPGKTESVVS 524

Query: 523 RSLWLLLFLWIIILSVGFKIGACVSAK 549
           R    L+F W++ILSV +KIG C+ AK
Sbjct: 525 RGWLYLMFFWVLILSVSYKIGTCICAK 551

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100709|ref|XP_002311983.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222851803|gb|EEE89350.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 327/591 (55%), Positives = 400/591 (67%), Gaps = 68/591 (11%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGR  ++TSLAPGFRFHPTDEELVRYYLKRKV ++  RF+ I VTDIYKSEPWDLPDKS 
Sbjct: 1   MGRSDSATSLAPGFRFHPTDEELVRYYLKRKVTNKPFRFDAISVTDIYKSEPWDLPDKSK 60

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFSMLDKKYGNGS+TNRATEKGYWKTTGKDRP+  N++ VGMKKTLVYH G
Sbjct: 61  LKSRDLEWYFFSMLDKKYGNGSKTNRATEKGYWKTTGKDRPIRQNSQVVGMKKTLVYHQG 120

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEW 180
           RAP G+R+NWVMHEYRL D++LEKAG+AQD FVLCRIFQKSG+GPKNGEQYGAPFIEEEW
Sbjct: 121 RAPRGQRSNWVMHEYRLVDEELEKAGIAQDAFVLCRIFQKSGTGPKNGEQYGAPFIEEEW 180

Query: 181 EDDEAVDAALVPGHD-VVADELVVSDDAYFETNDLDQ----------------------- 216
           +DDE     L+P  + V+ +E  V DDAY E N+L Q                       
Sbjct: 181 DDDE---VPLLPSEEMVLTEEAPVGDDAYLEMNELGQVCTCIVTCVSVTCSLGSICHQTS 237

Query: 217 -NIDVANQSENAPRHLNFYHGESSNHVEHSRDLSPDNQKPMIGVGATQHNSEL------- 268
            N D    SEN     NFY+GE+SN+VE  RD S D+ KPM+     +H   L       
Sbjct: 238 HNFDTGITSENTALPQNFYYGEASNYVEQPRDFSEDDLKPMLRGAENRHGPSLPAEENLD 297

Query: 269 ----MDARPVKDEYIDSS--NGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTV 322
                +   VK+EY ++   N VNA  VNY  +E YLDA +N   S+GL+LEANDLS+ V
Sbjct: 298 LPGQYETDAVKNEYNNAEPMNNVNAVDVNYLFDESYLDALNNLPQSEGLFLEANDLSNPV 357

Query: 323 E----ADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEQVTEVT 378
           E     DS GFDM+EEYLNFFDA+D+N   ++FD S+I  S    S+Q P   E     T
Sbjct: 358 EPETGGDSSGFDMLEEYLNFFDADDEN---MSFDPSDIFASDTAVSNQQPPPQEG---GT 411

Query: 379 DQMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEF 438
           D++  A Q  +E HGN   S+S+QKP+ ++ +SD KYPF+KQAS MLG + A PA ASEF
Sbjct: 412 DEVLKAIQKPLETHGNVGPSSSKQKPEAMEFDSDFKYPFIKQASHMLGKIPAPPALASEF 471

Query: 439 PTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNV 498
           P+KDAALRL S +  SSS+HVTAG+IRI N++L G+G +WS GKNG+++++ SF L Q  
Sbjct: 472 PSKDAALRLRSAS--SSSIHVTAGVIRIENMSLGGNGTEWSFGKNGNVDVILSFGLPQQE 529

Query: 499 ISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK 549
                           G   SVV R    L+F W++ILSV +KIG C+ AK
Sbjct: 530 ---------------GGPAKSVVSRGWLFLMFFWVLILSVSYKIGTCICAK 565

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486687|ref|XP_002265345.2| PREDICTED: NAC domain-containing protein 78-like [Vitis vinifera] gi|296085948|emb|CBI31389.3| unnamed protein product [Vitis vinifera]

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 311/565 (55%), Positives = 401/565 (70%), Gaps = 22/565 (3%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGRE A+ SLAPGFRFHPTDEELV YYLKRKVC +  RF+ I   DIYKSEPWDLP +S 
Sbjct: 1   MGRESAA-SLAPGFRFHPTDEELVWYYLKRKVCGKLFRFDTISEIDIYKSEPWDLPGQSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFS+LDKKYGNGSRTNRAT++GYWKTTGKDR V H  RTVGMKKTLVYH G
Sbjct: 60  LKSRDLEWYFFSVLDKKYGNGSRTNRATDRGYWKTTGKDREVRHRARTVGMKKTLVYHSG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEW 180
           RAP GERTNWVMHEYRL D++L+K GVAQD FVLCRIFQKSGSGPKNGEQYGAPF+EEE 
Sbjct: 120 RAPRGERTNWVMHEYRLMDEELKKTGVAQDAFVLCRIFQKSGSGPKNGEQYGAPFVEEE- 178

Query: 181 EDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSN 240
            D++      VPG ++ A+E+V   +   E  DL++ +D+    EN P  LNFY+G+ S 
Sbjct: 179 WDEDEDVVVFVPG-ELAAEEVVAGHEPSDEAVDLEKCLDIGLPPENDPLPLNFYYGDCSK 237

Query: 241 HVEHSRDLSPDNQKPMIGVGATQHNSEL--------------MDARPVKDE-YIDSSNGV 285
           + E SR  + + QKP IG+      SEL              +DA+ VKDE Y++ SN V
Sbjct: 238 YAEDSRVFNENEQKPFIGMEENHCGSELPNDQKIFDLSEQYEVDAKSVKDEYYVEQSNDV 297

Query: 286 NAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDN 345
           N+  V+Y L+EPYLDA++N  F DG +LE +DLS+ VE D  GFD ++EYL F DA+ DN
Sbjct: 298 NSVEVDYLLDEPYLDASENLAFEDGFFLETDDLSNPVETDPSGFD-IDEYLAFLDADGDN 356

Query: 346 SEYLTFDASEILGSGDNNSDQVPLTTEQVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPD 405
            + + F + E++GS +  SD  PL  E V    +++ +  Q   E +G+  AS+S++ P+
Sbjct: 357 LQQMAFGSFEMMGSENPLSDLAPLDQEPVNGGAEKLPIGSQQLSEAYGDSGASSSKKNPE 416

Query: 406 IVKSESDVKYPFLKQAS-QMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMI 464
             + ESD+ YPF+KQAS Q+LG + A  A AS+ PTKD ALRLNS    SSSVH+TAGMI
Sbjct: 417 ATEFESDIPYPFIKQASYQLLGGIPAPFASASDAPTKDVALRLNSAMQSSSSVHLTAGMI 476

Query: 465 RIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRS 524
           +IR+ TLSG+G+DWS GK+G++N + SF L Q   + +  S EP  ++ SGK G V+ R+
Sbjct: 477 QIRDTTLSGNGVDWSYGKSGNINFMLSFGLPQGETNSA--SLEPIASLMSGKAGPVISRA 534

Query: 525 LWLLLFLWIIILSVGFKIGACVSAK 549
            + L+F+W++ILSV +KIG C+ ++
Sbjct: 535 GFYLIFIWVLILSVSYKIGTCICSR 559

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302399033|gb|ADL36811.1| NAC domain class transcription factor [Malus x domestica]

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 319/607 (52%), Positives = 400/607 (65%), Gaps = 73/607 (12%)

Query: 9   SLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEW 68
           SLAPGFRFHPTDEELV YYLKRKV  ++ RF+PI V DIYK+EPWDLP KS LKTRD EW
Sbjct: 8   SLAPGFRFHPTDEELVWYYLKRKVSGKNFRFDPISVIDIYKTEPWDLPGKSKLKTRDLEW 67

Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERT 128
           YFFS LDKKYGN SRTNRATEKGYWKTTGKDRPV HN+R VGMKKTLV+H GRAP G RT
Sbjct: 68  YFFSFLDKKYGNSSRTNRATEKGYWKTTGKDRPVKHNSRDVGMKKTLVFHSGRAPTGART 127

Query: 129 NWVMHEYRLTDDDLEKAGVAQ-DTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEAVD 187
           NWVMHEYRL++++LEKAG+ Q D +VLCRIFQKSG+GPKNGE+YGAP +EEEW+DD   D
Sbjct: 128 NWVMHEYRLSNEELEKAGIQQKDPYVLCRIFQKSGTGPKNGEKYGAPVMEEEWDDD---D 184

Query: 188 AALVPGHDVVAD-----------ELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHG 236
              VPG +  AD            + V+D AY E  DLDQN+D    SE+AP   NFY+G
Sbjct: 185 VTCVPGEEAAADVVALSEEPHVEAICVNDGAYVEAFDLDQNLDTGIPSESAPPPSNFYYG 244

Query: 237 ESSNHVEHSRDLSPDNQKPMIGVGAT-------------QHN--------SELM------ 269
           E+S+++EHS D   D+ K +IG G T             +HN        +E M      
Sbjct: 245 ETSHYIEHSGDFVEDDTKAVIGTGETLEYHGDQMFFNYPEHNETVGNPVKNEYMTSQSPE 304

Query: 270 -------------DARPVKDE-YIDSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEA 315
                        DA+ VKDE +++ S+  N   VNY LNEPYL+AT+N    DGL+LEA
Sbjct: 305 DLKFVDLPEHNEADAKSVKDECFLEPSDDANPAVVNYSLNEPYLNATENTPIGDGLFLEA 364

Query: 316 NDLSSTVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEQVT 375
           NDLS+ VE+ + GFDM++EYL +FDANDD S+Y+ FD+  ++G  +   D+ P   + V 
Sbjct: 365 NDLSNPVES-TAGFDMLDEYLTYFDANDDISQYIDFDSYGMMGVENYVPDEAPADQKLVN 423

Query: 376 EVTDQMSM------------AGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQ 423
             T+   M             G+H V+    D AS+S++  +  K ESD  YPF+K+AS 
Sbjct: 424 GETEPQPMGGEHVQPEPQPLGGEHLVQPVDTDDASSSKKTAEF-KFESDGNYPFIKKASH 482

Query: 424 -MLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSGSGLDWSVGK 482
            MLG++ A PAFASEFP K+A  RLNS A  SSSVHVTA MIRIR+IT S + +DWS GK
Sbjct: 483 MMLGSIPAPPAFASEFPGKEAMRRLNSGAASSSSVHVTAAMIRIRDITSSDNRMDWSFGK 542

Query: 483 NGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKI 542
           +G +N+VFS  LSQ+    +  +  P G   SGKTG VV R  +L +F W++ LS+  KI
Sbjct: 543 DGVVNLVFSVQLSQD--DGNSGNLVPVGGSLSGKTGCVVMRGWFLFMFFWVLFLSMSLKI 600

Query: 543 GACVSAK 549
           G+ +  +
Sbjct: 601 GSYIYTR 607

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147802301|emb|CAN70406.1| hypothetical protein VITISV_021988 [Vitis vinifera]

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 306/553 (55%), Positives = 390/553 (70%), Gaps = 22/553 (3%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGRE A+ SLAPGFRFHPTDEELV YYLKRKVC +  RF+ I   DIYKSEPWDLP +S 
Sbjct: 1   MGRESAA-SLAPGFRFHPTDEELVWYYLKRKVCGKLFRFDTISEIDIYKSEPWDLPGQSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFS+LDKKYGNGSRTNRAT++GYWKTTGKDR V H  RTVGMKKTLVYH G
Sbjct: 60  LKSRDLEWYFFSVLDKKYGNGSRTNRATDRGYWKTTGKDREVRHRARTVGMKKTLVYHSG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEW 180
           RAP GERTNWVMHEYRL D++L+K GVAQD FVLCRIFQKSGSGPKNGEQYGAPF+EEE 
Sbjct: 120 RAPRGERTNWVMHEYRLMDEELKKTGVAQDAFVLCRIFQKSGSGPKNGEQYGAPFVEEE- 178

Query: 181 EDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSN 240
            D++      VPG ++ A+E+V   +   E  DL++ +D+    EN P  LNFY+G+ S 
Sbjct: 179 WDEDEDVVVFVPG-ELAAEEVVAGHEPSDEAVDLEKCLDIGLPPENDPLPLNFYYGDCSK 237

Query: 241 HVEHSRDLSPDNQKPMIGVGATQHNSEL--------------MDARPVKDE-YIDSSNGV 285
           + E SR  + + QKP IG+      SEL              +DA+ VKDE Y++ SN V
Sbjct: 238 YAEDSRVFNENEQKPFIGMEENHCGSELPNDQKIFDLSEQYEVDAKSVKDEYYVEQSNDV 297

Query: 286 NAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFFDANDDN 345
           N+  V+Y L+EPYLDA++N  F DG +LE +DLS+ VE D  GFD ++EYL F DA+ DN
Sbjct: 298 NSVEVDYLLDEPYLDASENLAFEDGFFLETDDLSNPVETDPSGFD-IDEYLAFLDADGDN 356

Query: 346 SEYLTFDASEILGSGDNNSDQVPLTTEQVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPD 405
            + + F + E++GS +  SD  PL  E V    ++  +  Q   E +G+  AS+S++ P 
Sbjct: 357 LQQMAFGSFEMMGSENPLSDLAPLDQEPVNGGAEKXPIGSQQLSEAYGDSGASSSKKNPX 416

Query: 406 IVKSESDVKYPFLKQAS-QMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHVTAGMI 464
             + ESD+ YPF+KQAS Q+LG + A  A AS+ PTKD ALRLNS    SSSVH+TAGMI
Sbjct: 417 ATEFESDIPYPFIKQASYQLLGGIPAPFASASDAPTKDVALRLNSAMQSSSSVHLTAGMI 476

Query: 465 RIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTGSVVFRS 524
           +IR+ TLSG+G+DWS GK+G++N + SF L Q   + +  S EP  ++ SGK G V+ R+
Sbjct: 477 QIRDTTLSGNGVDWSYGKSGNINFMLSFGLPQGETNSA--SLEPIASLMSGKAGPVISRA 534

Query: 525 LWLLLFLWIIILS 537
            + L+F+W++ILS
Sbjct: 535 GFYLIFIWVLILS 547

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449532398|ref|XP_004173168.1| PREDICTED: NAC domain-containing protein 78-like [Cucumis sativus]

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 304/580 (52%), Positives = 390/580 (67%), Gaps = 45/580 (7%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGR+ ++TSLAPGFRFHPTDEELV YYLKRKV  +  RF+PI V DIYKSEPWDLP KS 
Sbjct: 1   MGRD-SATSLAPGFRFHPTDEELVSYYLKRKVSGKPFRFDPISVIDIYKSEPWDLPGKSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFS LDKKYGN SRTNRATEKGYWKTTGKDRPV H+ RTVGMKKTLVYH+G
Sbjct: 60  LKSRDLEWYFFSALDKKYGNSSRTNRATEKGYWKTTGKDRPVRHSARTVGMKKTLVYHIG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLE----KAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFI 176
           RAP G RTNWVMHEY+LTD++++    K G+ QD FVLCRIFQKSG+GPKNGEQYGAPFI
Sbjct: 120 RAPRGARTNWVMHEYKLTDEEMDEEMGKIGIVQDAFVLCRIFQKSGTGPKNGEQYGAPFI 179

Query: 177 EEEWEDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENA-PRHLNFYH 235
           EEEWE++E +  A+VPG D  ADEL+       E +D  +N++    SE+A P   N+Y+
Sbjct: 180 EEEWEENEEL--AVVPGDDQAADELLGVGGVCIEGDDFSENVEEGILSESAPPPPFNYYY 237

Query: 236 GESSNHVEHSRDLSPDNQKPMIGVGATQHNSELMDA--------------RPVKDEYI-- 279
           GE+SN +E S +   D+QKP +G+  T   SEL D               R VK EY+  
Sbjct: 238 GETSNSIEQSDNYIEDDQKPAVGICET---SELPDGQKFFVLPDECGLHDRLVKHEYLAE 294

Query: 280 -------DSSNGVNAGGVN--YFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFD 330
                  ++++ VNAG ++  Y LNE +   +DN  FSD L LE N+LS+  E+D   FD
Sbjct: 295 SSNDAGANAADEVNAGDMDGRYVLNEAFYSTSDNLSFSDELLLEPNELSNPTESDPADFD 354

Query: 331 MVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEQVTEVTDQMSMAGQHQVE 390
           ++EEYL FFDA+ DN + ++FD SEILGSG      +P  TE V   T+  S + Q    
Sbjct: 355 VLEEYLTFFDADGDNVD-MSFDPSEILGSG----SPIPDQTEAVGGATEHASASKQTADL 409

Query: 391 VHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSL 450
            H N  +S+S Q+P+  KSESD+KYPFLK  S MLG++ A   FAS+F +KDAA+ LNS 
Sbjct: 410 RHDNGASSSSMQRPEDPKSESDIKYPFLKHTSHMLGSIPA--PFASQFTSKDAAIHLNSA 467

Query: 451 AHPSSSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAG 510
              SSSV VTAGM+ IRNI L+G  ++   GKN D+NI++ + + +  I  S      AG
Sbjct: 468 PQASSSVRVTAGMLVIRNIALNGYEVNNMYGKNSDLNIIYLYGIVEGNIDSSQLLPNAAG 527

Query: 511 NIFSGKTGSVVFRS-LWLLLFLWIIILSVGFKIGACVSAK 549
            + S K+  ++ R  L+  +  W++ILS  FK+  C+ ++
Sbjct: 528 -VNSSKSEPLISRYFLYFFILFWVLILSASFKVARCIHSR 566

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449383|ref|XP_004142444.1| PREDICTED: NAC domain-containing protein 78-like [Cucumis sativus]

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 293/528 (55%), Positives = 363/528 (68%), Gaps = 39/528 (7%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGR+ ++TSLAPGFRFHPTDEELV YYLKRKV  +  RF+PI V DIYKSEPWDLP KS 
Sbjct: 1   MGRD-SATSLAPGFRFHPTDEELVSYYLKRKVSGKPFRFDPISVIDIYKSEPWDLPGKSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFS LDKKYGN SRTNRATEKGYWKTTGKDRPV H+ RTVGMKKTLVYH+G
Sbjct: 60  LKSRDLEWYFFSALDKKYGNSSRTNRATEKGYWKTTGKDRPVRHSARTVGMKKTLVYHIG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEW 180
           RAP G RTNWVMHEY+LTD+++ K  + QD FVLCRIFQKSG+GPKNGEQYGAPFIEEEW
Sbjct: 120 RAPRGARTNWVMHEYKLTDEEMGKIAIVQDAFVLCRIFQKSGTGPKNGEQYGAPFIEEEW 179

Query: 181 EDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENA-PRHLNFYHGESS 239
           E++E +  A+VPG D  ADEL+       E +D  +N++    SE+A P   N+Y+GE+S
Sbjct: 180 EENEEL--AVVPGDDQAADELLGVGGVCIEGDDFSENVEEGILSESAPPPPFNYYYGETS 237

Query: 240 NHVEHSRDLSPDNQKPMIGVGATQHNSELMDA--------------RPVKDEYI-DSSNG 284
           N +E S +   D+QKP +G+  T   SEL D               R VK EY+ +SSN 
Sbjct: 238 NSIEQSDNYIEDDQKPAVGICET---SELPDGQKFFVLPDECGLHDRLVKHEYLAESSND 294

Query: 285 --------VNAGGVN--YFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEE 334
                   VNAG ++  Y LNE +   +DN  FSD L LE N+LS+  E+D   FD++EE
Sbjct: 295 AGANAADEVNAGDMDGRYVLNEAFYSTSDNLSFSDELLLEPNELSNPTESDPADFDVLEE 354

Query: 335 YLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEQVTEVTDQMSMAGQHQVEVHGN 394
           YL FFDA+ DN + ++FD SEILGSG      +P  TE V   T+  S + Q     H N
Sbjct: 355 YLTFFDADGDNVD-MSFDPSEILGSG----SPIPDQTEAVGGATEHASASKQTADLRHDN 409

Query: 395 DVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPS 454
             +S+S Q+P+  KSESD+KYPFLK  S MLG++ A   FAS+F +KDAA+ LNS    S
Sbjct: 410 GASSSSMQRPEDPKSESDIKYPFLKHTSHMLGSIPA--PFASQFTSKDAAIHLNSAPQAS 467

Query: 455 SSVHVTAGMIRIRNITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISPS 502
           SSV VTAGM+ IRNI L+G  ++   GKN D+NI++ + + +  I  S
Sbjct: 468 SSVRVTAGMLVIRNIALNGYEVNNMYGKNSDLNIIYLYGIVEGNIDSS 515

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465328|ref|XP_004150380.1| PREDICTED: NAC domain-containing protein 78-like [Cucumis sativus] gi|449513036|ref|XP_004164210.1| PREDICTED: NAC domain-containing protein 78-like [Cucumis sativus]

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 307/568 (54%), Positives = 378/568 (66%), Gaps = 38/568 (6%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MG + +STSLAPGFRFHPTDEE+VRYYL+RKV  +SLRF+PI VT+IYKSEPWDLP KS 
Sbjct: 1   MGSD-SSTSLAPGFRFHPTDEEIVRYYLRRKVSGKSLRFDPISVTEIYKSEPWDLPGKSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LKTRD EWYFFS LDKKYGN SRTNRATE GYWKTTGKDRPV HN+R VGMKKTLVYH G
Sbjct: 60  LKTRDLEWYFFSPLDKKYGNSSRTNRATEHGYWKTTGKDRPVRHNSRVVGMKKTLVYHSG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEW 180
           RAP G R+NWVMHEYRLTD+DLEKAGV QD +VLCRIFQKSGSGPKNGEQYGAPFIEEEW
Sbjct: 120 RAPRGARSNWVMHEYRLTDEDLEKAGVVQDAYVLCRIFQKSGSGPKNGEQYGAPFIEEEW 179

Query: 181 EDDEAVDAALVPGHDVVADELVVSDDAY--FETNDLDQNIDVANQSENAPRHLNFYHGES 238
           EDDE +    +PG +VVA+E +V  D Y  FE +D+ Q  D     E     L  Y  E+
Sbjct: 180 EDDEEL---TLPGEEVVANEGLVDVDDYMHFEVDDIAQYFDGELPGEYGQPPL-IYPQET 235

Query: 239 SNHVEHSRDLSPDNQKPMIGVGATQHNSELMDARPVKDEY-------------------I 279
           SNHVE    L  ++ KP +  G T      ++   + ++Y                    
Sbjct: 236 SNHVELPNGLVENDNKPEVCAGDTFELQPSLNFFQLPEQYGTGESSERDDRFAESSGNLA 295

Query: 280 DSSNGVNAGGVNYFLNEPYLDATDNPQFSDGLYLEANDLSSTVEADSQGFDMVEEYLNFF 339
           +SS+  N   +NY L+EPY    D+   ++ L+LEANDLS+ VE+D    D++EEY  FF
Sbjct: 296 ESSDNFNQEDINYLLDEPYPSVPDDLALNEELFLEANDLSNPVESDPSALDVLEEYFTFF 355

Query: 340 DANDDNSEYLTFDASEILGSGDNNSDQVPLTTEQVTEVTDQMSMAGQHQVEVHGNDVAST 399
           DA DDN + L FD S++  S +  S Q   + E+V+EV ++  MA +       ND AST
Sbjct: 356 DA-DDNLQ-LAFDPSDLFDSEEPISSQT-TSEEKVSEVAEKEFMAAKQSSVTFVND-AST 411

Query: 400 SEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFPTKDAALRLNSLAHPSSSVHV 459
           S+Q P  +++ SD K PF K AS MLGN+ A PAFASE+P+KD A+RLNS A  SSSVHV
Sbjct: 412 SKQDPKAIETSSDSKSPFFKGASYMLGNIPAPPAFASEYPSKDMAIRLNSAAQTSSSVHV 471

Query: 460 TAGMIRIRNITLSGSGL-DWSVGKNGDMNIVFSFDLSQNVISPSPTSFEPAGNIFSGKTG 518
           TAGMI IRN+T +G  + D   GKN D+N++ SF   Q+ +     S E  G I  G  G
Sbjct: 472 TAGMIHIRNLTSNGDLVNDPLYGKNADVNLILSFAQHQHQVESDHQS-EKNGTIV-GSRG 529

Query: 519 SVVFRSLWLLLFLWIIILSVGFKIGACV 546
            + F  L      W++ILSV FK+G+C+
Sbjct: 530 FLFFFLL-----FWVLILSVSFKVGSCI 552

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806417|ref|XP_002871092.1| hypothetical protein ARALYDRAFT_908325 [Arabidopsis lyrata subsp. lyrata] gi|297316929|gb|EFH47351.1| hypothetical protein ARALYDRAFT_908325 [Arabidopsis lyrata subsp. lyrata]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 285/591 (48%), Positives = 366/591 (61%), Gaps = 65/591 (10%)

Query: 1   MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
           MGR  + TSLAPGFRFHPTDEELVRYYLKRKVC++  +F+ I VTDIYKSEPWDLPDKS 
Sbjct: 1   MGRG-SVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSK 59

Query: 61  LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
           LK+RD EWYFFSMLDKKY NGS+TNRATEKGYWKTTGKDR + + +R VGMKKTLVYH G
Sbjct: 60  LKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKG 119

Query: 121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEW 180
           RAP GERTNWVMHEYRL+D+DL+KAGV Q+ +VLCRIFQKSG+GPKNGEQYGAPF+EEEW
Sbjct: 120 RAPRGERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGPKNGEQYGAPFLEEEW 179

Query: 181 EDDEAVDAALVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSN 240
           E+D       VP  D  ++ L V DD Y + +D+D+  +     +  P   N+ HGESSN
Sbjct: 180 EEDAMT---YVPDQDSFSEGLAVDDDVYVDIDDIDEKPENLVVYDAVPILPNYCHGESSN 236

Query: 241 HVE------HSRDLSPDN-------------------QKPMIGVGATQHNSELMDAR--- 272
           +VE          + P N                   QKP+I  G+ Q  S   + +   
Sbjct: 237 NVESGNYSDSGNYIQPGNYVVDSGGYFEQPIETFEEDQKPIIRDGSIQPCSLFPEEQIGC 296

Query: 273 PVKDEYI----DSSNGVNAG---------GVNYFLNEPYLDATDNPQFSDGLYLEANDLS 319
            V+DE       S+N V              NY  +EP++D  +N   +DGLYLE NDLS
Sbjct: 297 GVQDENAVNLESSNNNVFVADTCYSDIPIDTNYLPDEPFMDPNNNLPLNDGLYLETNDLS 356

Query: 320 STVEADSQGFDMVEEYLNFFDANDDNSEYLTFDASEILGSGDNNSDQVPLTTEQVTEVTD 379
              + D   F+  E+YLNFFD      E  T D S+++G      +   L  +   E  +
Sbjct: 357 CAQQDD---FNF-EDYLNFFD-----DESFTLDDSQLMGPEAALPNLEGLDQKPTPEELE 407

Query: 380 QMSMAGQHQVEVHGNDVASTSEQKPDIVKSESDVKYPFLKQASQMLGNVAAAPAFASEFP 439
           +    G+  VE   +   S+S+Q  D+   +S  KYPFLK+ S MLG +    +FAS+F 
Sbjct: 408 KEVAGGKEAVEEKESGEGSSSKQDADVKDFDSASKYPFLKKTSHMLGAIPTPSSFASQFQ 467

Query: 440 TKDAALRLNSLAHPSSSVHVTAGMIRIRNITLSG-SGLDWSVGKNGDMNIVFSFDLSQNV 498
           TKDAA+RL++ A  S SVHVTAGMIRI N+TL+  SG+ WS  KNG++N+V SF + Q  
Sbjct: 468 TKDAAMRLHA-AQSSGSVHVTAGMIRISNMTLAADSGMGWSYDKNGNLNVVLSFGVVQR- 525

Query: 499 ISPSPTSFEPAGNIFSGKTGSVVFRSLWLLLFLWIIILSVGFKIGACVSAK 549
                   + A +    KT +   R++ + + LW+++LSV FKI   V A+
Sbjct: 526 --------DDALSASGSKTETTATRAMLVFMCLWVLLLSVSFKIVTMVFAR 568

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	549
TAIR|locus:2184342	567	NAC2 "NAC domain containing pr	0.435	0.421	0.654	8.2e-123
TAIR|locus:2075815	549	NAC053 "AT3G10500" [Arabidopsi	0.876	0.876	0.421	3.3e-86
TAIR|locus:2037925	528	NAC13 "NAC domain protein 13"	0.300	0.312	0.633	3.4e-65
TAIR|locus:2075835	451	NAC052 "NAC domain containing	0.442	0.538	0.519	7.9e-62
TAIR|locus:2009096	557	NAC017 "NAC domain containing	0.300	0.296	0.6	6.9e-59
TAIR|locus:2009729	631	NAC028 "NAC domain containing	0.300	0.261	0.604	1.7e-58
TAIR|locus:2097720	479	NAC045 "NAC domain containing	0.282	0.323	0.608	3.8e-58
TAIR|locus:2184742	489	NAC082 "NAC domain containing	0.306	0.343	0.619	7.8e-58
TAIR|locus:2026114	576	NAC016 "NAC domain containing	0.300	0.286	0.542	2.9e-54
TAIR|locus:2164391	356	NAC103 "NAC domain containing	0.306	0.471	0.595	1.9e-53

TAIR|locus:2184342 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 853 (305.3 bits), Expect = 8.2e-123, Sum P(2) = 8.2e-123
 Identities = 159/243 (65%), Positives = 189/243 (77%)

Query:     1 MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
             MGR  + TSLAPGFRFHPTDEELVRYYLKRKVC++  +F+ I VTDIYKSEPWDLPDKS 
Sbjct:     1 MGRG-SVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSK 59

Query:    61 LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
             LK+RD EWYFFSMLDKKY NGS+TNRATEKGYWKTTGKDR + + +R VGMKKTLVYH G
Sbjct:    60 LKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKG 119

Query:   121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIXXXX 180
             RAP GERTNWVMHEYRL+D+DL+KAGV Q+ +VLCRIFQKSG+GPKNGEQYGAP++    
Sbjct:   120 RAPRGERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGPKNGEQYGAPYLEEEW 179

Query:   181 XXXXXXXXXLVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSN 240
                       VP  D  ++ L ++DD Y + +D+D+  +     +  P   N+ HGESSN
Sbjct:   180 EEDGMTY---VPAQDAFSEGLALNDDVYVDIDDIDEKPENLVVYDAVPILPNYCHGESSN 236

Query:   241 HVE 243
             +VE
Sbjct:   237 NVE 239

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0009644 "response to high light intensity" evidence=IEP

GO:0009962 "regulation of flavonoid biosynthetic process" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2075815 NAC053 "AT3G10500" [Arabidopsis thaliana (taxid:3702)]

 Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
 Identities = 225/534 (42%), Positives = 296/534 (55%)

Query:     1 MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSS 60
             MGR  + TSLAPGFRFHPTDEELVRYYLKRK+C++  +F+ I VTD+YKSEPWDLPDKS 
Sbjct:     1 MGRG-SVTSLAPGFRFHPTDEELVRYYLKRKICNKPFKFDAISVTDVYKSEPWDLPDKSR 59

Query:    61 LKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMG 120
             LK+RD EWYFFSMLDKKY NGS+TNRATE GYWKTTGKDR + + ++ VGMKKTLVYH G
Sbjct:    60 LKSRDLEWYFFSMLDKKYRNGSKTNRATEMGYWKTTGKDREILNGSKVVGMKKTLVYHKG 119

Query:   121 RAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPFIXXXX 180
             RAP GERTNWVMHEYRL D DL+K GV QD FVLCRIFQKSGSGPKNGEQYGAPF+    
Sbjct:   120 RAPRGERTNWVMHEYRLVDQDLDKTGVHQDAFVLCRIFQKSGSGPKNGEQYGAPFVEEEW 179

Query:   181 XXXXXXXXXLVPGHDVVADELVVSDDAYFETNDLDQNIDVANQSENAPRHLNFYHGESSN 240
                       VP  + +  E    D  Y   +D+DQ  +     +  P  LNF HGESSN
Sbjct:   180 EEEDDMT--FVPDQEDLGSE----DHVYVHMDDIDQKSENFVVYDAIPIPLNFIHGESSN 233

Query:   241 HVE--HSRDLSPDNQKP--MIGVGATQHNSELM--DARPVKDEYIDSSNGVNAG-GVNYF 293
             +VE  +S  ++   Q    M   G  +  +E    D +P+  +   S      G GV   
Sbjct:   234 NVETNYSDSINYIQQTGNYMDSGGYFEQPAESYEKDQKPIIRDRDGSLQNEGIGCGVQDK 293

Query:   294 LNEPYLDATDNPQFSD-GLY----LEANDLSSTVEADSQGFDMVEEYLNFFDAND-DNSE 347
              +E  L ++DN   +D   Y    +E+N L      D    +++E    + + ND  +++
Sbjct:   294 HSET-LQSSDNIFGTDTSCYNDFPVESNYLIGEAFLDPNS-NLLENDGLYLETNDLSSTQ 351

Query:   348 YLTFDASEILGSGDNNSDQVPLT-TEQVTEVTDQMSMAGQHQVEVHGNDVASTSEQKPDI 406
                FD  + L   D   D   L   E V    DQ  +    +VE    +   TS  K  +
Sbjct:   352 QDGFDFEDYLTFFDETFDPSQLMGNEDV--FFDQEELF--QEVETKELEKEETSRSKHVV 407

Query:   407 VKSESDVKYPFLKQASQMLGNVAAAPAFASEF--PT-KDAALRLNSLAHPSSS------- 456
              + E D +    KQ        A A  F  ++  P  K A+  L ++  P ++       
Sbjct:   408 EEKEKD-EASCSKQVD------ADATEFEPDYKYPLLKKASHMLGAIPAPLANASEFPTK 460

Query:   457 -----VHV--TAGMIRIRN--ITLSGSGLDWSVGKNGDMNIVFSFDLSQNVISP 501
                  +H   ++G + +    IT+S S + WS GKN +++++ S  L Q   +P
Sbjct:   461 DAAIRLHAAQSSGSVHVTAGMITISDSNMGWSYGKNENLDLILSLGLVQGNTAP 514

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009819 "drought recovery" evidence=IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2037925 NAC13 "NAC domain protein 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 586 (211.3 bits), Expect = 3.4e-65, Sum P(3) = 3.4e-65
 Identities = 107/169 (63%), Positives = 137/169 (81%)

Query:    10 LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWY 69
             LAPGFRFHPTDEELV YYLKRK+  + LR   I  TD+YK +P +LP+K+  KTRD++W+
Sbjct:    10 LAPGFRFHPTDEELVVYYLKRKIRRKKLRVEAIGETDVYKFDPEELPEKALYKTRDRQWF 69

Query:    70 FFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTN 129
             FFS+ D+K+G  SR++RATE+GYWK TGKDR +H ++R VG KKTLV+H GRAP+GERTN
Sbjct:    70 FFSLRDRKHG--SRSSRATERGYWKATGKDRVIHCDSRPVGEKKTLVFHRGRAPNGERTN 127

Query:   130 WVMHEYRLTDDDLEKAGV--AQDTFVLCRIFQKSGSGPKNGEQYGAPFI 176
             WVMHEY L  ++L++ G    +D +VL +I++KSGSGPKNGEQYGAPFI
Sbjct:   128 WVMHEYTLHKEELKRCGGEDVKDAYVLYKIYKKSGSGPKNGEQYGAPFI 176

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010114 "response to red light" evidence=IEP

GO:0010224 "response to UV-B" evidence=IEP

GO:0005737 "cytoplasm" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

TAIR|locus:2075835 NAC052 "NAC domain containing protein 52" [Arabidopsis thaliana (taxid:3702)]

 Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
 Identities = 133/256 (51%), Positives = 161/256 (62%)

Query:     2 GREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSL 61
             G    +TSLAPGFRFHPTDEELV YYLKRKV  + +RF+ I   DIYK EPWDL   S L
Sbjct:    19 GTASVATSLAPGFRFHPTDEELVSYYLKRKVLGQPVRFDAIGEVDIYKHEPWDLAVFSRL 78

Query:    62 KTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGR 121
             KTRD+EWYF+S LDKKYGNG+R NRAT +GYWK TGKDR +  +   +GMKKTLV+H GR
Sbjct:    79 KTRDQEWYFYSALDKKYGNGARMNRATNRGYWKATGKDREIRRDILLLGMKKTLVFHSGR 138

Query:   122 APHGERTNWVMHEYRLTDDDLEKAG-VAQDTFVLCRIFQKSGSGPKNGEQYGAPFIXXXX 180
             AP G RTNWVMHEYRL + + EK G + QD +VLCR+F K+  GP +G +Y APF+    
Sbjct:   139 APDGLRTNWVMHEYRLVEYETEKNGNLVQDAYVLCRVFHKNNIGPPSGNRY-APFMEEEW 197

Query:   181 XXXXXXXXXLVPGHDVVADELVVSDDAYFETND-LDQNIDVANQS----ENAPRHLNFYH 235
                      L+PG DV   +L +        ND +DQ I  A++S       PR      
Sbjct:   198 ADDEGA---LIPGIDV---KLRLEPPPVANGNDQMDQEIQSASKSLININEPPRETAPLD 251

Query:   236 GESSNHVEHSRDLSPD 251
              ES     H  DL P+
Sbjct:   252 IESDQQNHHENDLKPE 267

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005730 "nucleolus" evidence=IDA

GO:0009555 "pollen development" evidence=IMP

TAIR|locus:2009096 NAC017 "NAC domain containing protein 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 579 (208.9 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
 Identities = 99/165 (60%), Positives = 131/165 (79%)

Query:    11 APGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYF 70
             APGFRFHPTDEELV YYLKRK+C + LR N I V D+YK +P +LP +S LKT D++W++
Sbjct:    17 APGFRFHPTDEELVMYYLKRKICRKRLRVNVIGVVDVYKMDPEELPGQSMLKTGDRQWFY 76

Query:    71 FSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNW 130
             F+   +KY N +R+NR TE GYWK TGKDR + +N+R+VG+KKTLV++ GRAP GERT+W
Sbjct:    77 FTPRSRKYPNAARSNRGTENGYWKATGKDRVIEYNSRSVGLKKTLVFYRGRAPSGERTDW 136

Query:   131 VMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPF 175
             VMHEY + +D+L +    Q+ + L ++F+KSG+GPKNGEQYGAPF
Sbjct:   137 VMHEYTMDEDELGRCKNPQEYYALYKLFKKSGAGPKNGEQYGAPF 181

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

GO:0016197 "endosomal transport" evidence=RCA

TAIR|locus:2009729 NAC028 "NAC domain containing protein 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 541 (195.5 bits), Expect = 1.7e-58, Sum P(3) = 1.7e-58
 Identities = 101/167 (60%), Positives = 124/167 (74%)

Query:     6 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
             A  S+ PGFRFHPTDEELV YYLKRK+  R++    I   D+YK EPWDLP KS L ++D
Sbjct:     2 APVSMPPGFRFHPTDEELVIYYLKRKINGRTIELEIIPEIDLYKCEPWDLPGKSLLPSKD 61

Query:    66 KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
              EW+FFS  D+KY NGSRTNRAT+ GYWK TGKDR V  ++R VG KKTLVY+ GRAPHG
Sbjct:    62 LEWFFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVTSHSRMVGTKKTLVYYRGRAPHG 121

Query:   126 ERTNWVMHEYRLTDDDLE-KAGVAQDTFVLCRIFQKSGSGPKNGEQY 171
              RT+WVMHEYRL + + + K+G+ QD + LCR+F+KS    K  EQ+
Sbjct:   122 SRTDWVMHEYRLEEQECDSKSGI-QDAYALCRVFKKSALANKIEEQH 167

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2097720 NAC045 "NAC domain containing protein 45" [Arabidopsis thaliana (taxid:3702)]

 Score = 522 (188.8 bits), Expect = 3.8e-58, Sum P(2) = 3.8e-58
 Identities = 95/156 (60%), Positives = 112/156 (71%)

Query:     6 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
             A  SL PGFRFHPTDEEL+ YYLKRK+    +    I   D+YK EPWDLP KS L ++D
Sbjct:     2 APVSLPPGFRFHPTDEELITYYLKRKINGLEIELEVIAEVDLYKCEPWDLPGKSLLPSKD 61

Query:    66 KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
             +EWYFFS  D+KY NGSRTNRAT+ GYWK TGKDR V    R +G KKTLVY+ GRAPHG
Sbjct:    62 QEWYFFSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWRDRAIGTKKTLVYYRGRAPHG 121

Query:   126 ERTNWVMHEYRLTDDDLEKAGVA-QDTFVLCRIFQK 160
              RT WVMHEYRL + + E +    QD + LCR+F+K
Sbjct:   122 IRTGWVMHEYRLDETECEPSAYGMQDAYALCRVFKK 157

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2184742 NAC082 "NAC domain containing protein 82" [Arabidopsis thaliana (taxid:3702)]

 Score = 566 (204.3 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
 Identities = 104/168 (61%), Positives = 125/168 (74%)

Query:     8 TSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKE 67
             T LAPGFRFHPTD ELVRYYLKRK+  + L  + I   DIYK EP DLPD S +++ D +
Sbjct:     4 TQLAPGFRFHPTDVELVRYYLKRKILGKKLLVDAIAEVDIYKFEPPDLPDMSFIRSGDLK 63

Query:    68 WYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGER 127
             W+FF   +KKY +G R NRATE GYWKTTGK+RPV  N+  VG  KTLVYH G++P GER
Sbjct:    64 WHFFCPREKKYASGVRANRATECGYWKTTGKERPVLCNSEVVGKIKTLVYHFGKSPRGER 123

Query:   128 TNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPF 175
             T+WVMHEYRL D  L +  V QDT+V+C +F+K G GP+NG QYGAPF
Sbjct:   124 TDWVMHEYRLDDKVLTQMNVPQDTYVVCVLFKKDGPGPRNGAQYGAPF 171

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2026114 NAC016 "NAC domain containing protein 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 531 (192.0 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
 Identities = 96/177 (54%), Positives = 132/177 (74%)

Query:    11 APGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDK------------ 58
             APGFRFHPTDEELV YYLKRK+C + LR N I V D+YK +P +LP              
Sbjct:    17 APGFRFHPTDEELVVYYLKRKICCKKLRVNAIGVVDVYKVDPSELPGNFQHLLIDFDSCL 76

Query:    59 SSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYH 118
             S LKT D++W+FF+  ++KY N +R++R T  GYWK TGKDR + +N+R+VG+KKTLV++
Sbjct:    77 SMLKTGDRQWFFFTPRNRKYPNAARSSRGTATGYWKATGKDRVIEYNSRSVGLKKTLVFY 136

Query:   119 MGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPF 175
              GRAP+GERT+WVMHEY + +++L +   A++ + L ++++KSG+GPKNGEQYGAPF
Sbjct:   137 RGRAPNGERTDWVMHEYTMDEEELGRCKNAKEYYALYKLYKKSGAGPKNGEQYGAPF 193

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010200 "response to chitin" evidence=IEP

TAIR|locus:2164391 NAC103 "NAC domain containing protein 103" [Arabidopsis thaliana (taxid:3702)]

 Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
 Identities = 100/168 (59%), Positives = 123/168 (73%)

Query:     8 TSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKE 67
             T+LAPGFRFHPTD ELVRYYLKRKV  +  + + I   DIYK EP DLPDKS L T D +
Sbjct:     4 TNLAPGFRFHPTDVELVRYYLKRKVMGKKFQVDAIAEVDIYKFEPPDLPDKSCLGTGDLK 63

Query:    68 WYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGER 127
             WYFF   +KKY  G + NR+TE GYWKTTG+DR V +N    G  +TL+YH G+ P G+R
Sbjct:    64 WYFFCPREKKYPKGGKANRSTECGYWKTTGRDRDVSYNDEVTGKIRTLIYHYGKIPRGDR 123

Query:   128 TNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPKNGEQYGAPF 175
             T+WV+HEYRL D  L +  V QDT+VLC +F+K+G GP++G QYGAPF
Sbjct:   124 TDWVIHEYRLEDKVLAQKNVPQDTYVLCVLFKKNGLGPRHGSQYGAPF 171

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q84K00	NAC78_ARATH	No assigned EC number	0.4788	0.9562	0.9259	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: NAC049 NAC domain protein, IPR003441 (551 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	549
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	2e-77

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  239 bits (612), Expect = 2e-77
 Identities = 87/131 (66%), Positives = 96/131 (73%), Gaps = 3/131 (2%)

Query: 10  LAPGFRFHPTDEELVRYYLKRKVCHRSLR-FNPICVTDIYKSEPWDLPDKSSLKTRDKEW 68
           L PGFRFHPTDEELV YYLKRKV  + L   + I   DIYK EPWDLPD    K  D+EW
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPD-GKAKGGDREW 59

Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHH-NTRTVGMKKTLVYHMGRAPHGER 127
           YFFS  D+KY NGSRTNRAT  GYWK TGKD+PV       VGMKKTLV++ GRAP GE+
Sbjct: 60  YFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEK 119

Query: 128 TNWVMHEYRLT 138
           T+WVMHEYRL 
Sbjct: 120 TDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	549
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=2.6e-41  Score=303.74  Aligned_cols=127  Identities=53%  Similarity=1.026  Sum_probs=97.5

Q ss_pred             CCCCceeCCChHHHHHHHHHHHhcCCCCCC-CCeeecCCCCCCCCCCCcccccCCCCcceEeeeccccccCCCCcccccc
Q 008907           10 LAPGFRFHPTDEELVRYYLKRKVCHRSLRF-NPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTNRAT   88 (549)
Q Consensus        10 LPPGfRF~PTDEELV~~YLkrKi~G~plp~-d~I~evDVY~~ePWdLP~~s~~~~~d~eWYFFspr~kKy~nG~R~nRat   88 (549)
                      |||||||+|||+|||.+||++|+.|.+++. ++|+++|||.+|||+|+...  +.++++||||+++++++.+|.|.+|++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~--~~~~~~~yFF~~~~~~~~~~~r~~R~~   78 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKF--KGGDEEWYFFSPRKKKYPNGGRPNRVT   78 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHS--SS-SSEEEEEEE----------S-EEE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhc--cCCCceEEEEEecccccCCcccccccc
Confidence            899999999999999999999999999887 68999999999999999532  345779999999999999999999999


Q ss_pred             ccceeeecCCceeeec-CCeeEEEEEEEEeecCCCCCCCccCeEEEEEEeC
Q 008907           89 EKGYWKTTGKDRPVHH-NTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLT  138 (549)
Q Consensus        89 ggGyWKatGk~r~I~~-~g~vVG~KKtLvFy~Grap~G~KT~WvMhEYrL~  138 (549)
                      ++|+||.+|+.++|.. ++++||+||+|+||.++.+++.+|+|+||||+|.
T Consensus        79 ~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   79 GGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             TTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             cceEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            9999999999999997 9999999999999999888999999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	549
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		4e-41
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		6e-41
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		4e-40

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  166 bits (419), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 77/158 (48%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 9   SLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEW 68
           SL PGFRF+PTDEEL+  YL RK          I   D+YK +PW LP+K+     +KEW
Sbjct: 19  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG--EKEW 76
Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERT 128
           YFFS  D+KY NGSR NR    GYWK TG D+ +    + VG+KK LV+++G+AP G +T
Sbjct: 77  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 136
Query: 129 NWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPK 166
           NW+MHEYRL +          D +VLCRI++K  S  K
Sbjct: 137 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQK 174

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  165 bits (418), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 80/166 (48%), Positives = 105/166 (63%), Gaps = 7/166 (4%)
Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
           A  +L PGFRFHPTD+ELV +YL RK   + L    I   D+YK +PWDLP+++    R 
Sbjct: 11  AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAR- 69
Query: 66  KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
            EWYFF+  D+KY NGSR NRA   GYWK TG D+PV    RT+G+KK LV++ G+AP G
Sbjct: 70  -EWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRG 128
Query: 126 ERTNWVMHEYRL-----TDDDLEKAGVAQDTFVLCRIFQKSGSGPK 166
            +T+W+MHEYRL          +K  +  D +VLCR++ K     K
Sbjct: 129 VKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  162 bits (411), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 77/158 (48%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 9   SLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEW 68
           SL PGFRF+PTDEEL+  YL RK          I   D+YK +PW LP+K+     +KEW
Sbjct: 16  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG--EKEW 73
Query: 69  YFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERT 128
           YFFS  D+KY NGSR NR    GYWK TG D+ +    + VG+KK LV+++G+AP G +T
Sbjct: 74  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 133
Query: 129 NWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPK 166
           NW+MHEYRL +          D +VLCRI++K  S  K
Sbjct: 134 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQK 171

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	549
1ut7_A	171	No apical meristem protein; transcription regulati	1e-98
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	5e-96

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  295 bits (757), Expect = 1e-98
 Identities = 79/170 (46%), Positives = 102/170 (60%), Gaps = 6/170 (3%)

Query: 1   MGRE----FASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLP 56
           MG +        SL PGFRF+PTDEEL+  YL RK          I   D+YK +PW LP
Sbjct: 4   MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP 63

Query: 57  DKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLV 116
           +K+     +KEWYFFS  D+KY NGSR NR    GYWK TG D+ +    + VG+KK LV
Sbjct: 64  NKALF--GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALV 121

Query: 117 YHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSGPK 166
           +++G+AP G +TNW+MHEYRL +          D +VLCRI++K  S  K
Sbjct: 122 FYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQK 171

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  288 bits (739), Expect = 5e-96
 Identities = 80/166 (48%), Positives = 106/166 (63%), Gaps = 7/166 (4%)

Query: 6   ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRD 65
           A  +L PGFRFHPTD+ELV +YL RK   + L    I   D+YK +PWDLP+++      
Sbjct: 11  AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERA--LFGA 68

Query: 66  KEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHG 125
           +EWYFF+  D+KY NGSR NRA   GYWK TG D+PV    RT+G+KK LV++ G+AP G
Sbjct: 69  REWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRG 128

Query: 126 ERTNWVMHEYRLTDDDL-----EKAGVAQDTFVLCRIFQKSGSGPK 166
            +T+W+MHEYRL D        +K  +  D +VLCR++ K     K
Sbjct: 129 VKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	549
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=8.4e-54  Score=405.71  Aligned_cols=156  Identities=50%  Similarity=0.967  Sum_probs=136.0

Q ss_pred             CCCCCCCCCceeCCChHHHHHHHHHHHhcCCCCCCCCeeecCCCCCCCCCCCcccccCCCCcceEeeeccccccCCCCcc
Q 008907            5 FASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRT   84 (549)
Q Consensus         5 ~~~~~LPPGfRF~PTDEELV~~YLkrKi~G~plp~d~I~evDVY~~ePWdLP~~s~~~~~d~eWYFFspr~kKy~nG~R~   84 (549)
                      .+.+.|||||||||||||||.|||++|+.|.+++.++|+++|||++|||+||+.+..  ++.+|||||++++||++|.|+
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~--g~~ewYFFs~r~~ky~~g~R~   87 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALF--GAREWYFFTPRDRKYPNGSRP   87 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSS--CSSEEEEEEECCC-----CCS
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhcc--CCceEEEEeccccccCCCCCc
Confidence            356899999999999999999999999999999999999999999999999998753  467999999999999999999


Q ss_pred             ccccccceeeecCCceeeecCCeeEEEEEEEEeecCCCCCCCccCeEEEEEEeCCCchhh-----cCCCCCceEEEEeec
Q 008907           85 NRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEK-----AGVAQDTFVLCRIFQ  159 (549)
Q Consensus        85 nRatggGyWKatGk~r~I~~~g~vVG~KKtLvFy~Grap~G~KT~WvMhEYrL~~~~l~~-----ag~~qd~~VLCRIf~  159 (549)
                      +|+|++||||+||++++|..+|++||+||+|+||.|++|++.||+|+||||+|.+.....     .....++|||||||+
T Consensus        88 nR~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~  167 (174)
T 3ulx_A           88 NRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYN  167 (174)
T ss_dssp             CEEETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEE
T ss_pred             eeecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEE
Confidence            999999999999999999988999999999999999999999999999999999875321     112357999999999


Q ss_pred             ccC
Q 008907          160 KSG  162 (549)
Q Consensus       160 K~~  162 (549)
                      |++
T Consensus       168 K~~  170 (174)
T 3ulx_A          168 KKN  170 (174)
T ss_dssp             SCC
T ss_pred             cCC
Confidence            864

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=8e-54  Score=404.76  Aligned_cols=157  Identities=48%  Similarity=0.912  Sum_probs=132.2

Q ss_pred             CCCCCCCCceeCCChHHHHHHHHHHHhcCCCCCCCCeeecCCCCCCCCCCCcccccCCCCcceEeeeccccccCCCCccc
Q 008907            6 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRTN   85 (549)
Q Consensus         6 ~~~~LPPGfRF~PTDEELV~~YLkrKi~G~plp~d~I~evDVY~~ePWdLP~~s~~~~~d~eWYFFspr~kKy~nG~R~n   85 (549)
                      +...|||||||||||||||.|||++|+.|.+++.++|+++|||++|||+||+.+.  .++.+|||||++++||++|.|++
T Consensus        13 ~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~--~g~~ewyFFs~r~~k~~~g~R~~   90 (171)
T 1ut7_A           13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKAL--FGEKEWYFFSPRDRKYPNGSRPN   90 (171)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSS--SCSSEEEEEEECCC-------CC
T ss_pred             cccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhh--cCCccEEEEeccccccCCCCccc
Confidence            4578999999999999999999999999999999999999999999999999874  34789999999999999999999


Q ss_pred             cccccceeeecCCceeeecCCeeEEEEEEEEeecCCCCCCCccCeEEEEEEeCCCchhhcCCCCCceEEEEeecccCCC
Q 008907           86 RATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKSGSG  164 (549)
Q Consensus        86 RatggGyWKatGk~r~I~~~g~vVG~KKtLvFy~Grap~G~KT~WvMhEYrL~~~~l~~ag~~qd~~VLCRIf~K~~~g  164 (549)
                      |+|++||||+||++++|..++++||+||+|+||.|++|++.||+|+||||+|...........+++|||||||+|++..
T Consensus        91 R~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~~k~~~~  169 (171)
T 1ut7_A           91 RVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSA  169 (171)
T ss_dssp             EEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC---
T ss_pred             ccCCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccccCcccCCCEEEEEEEEcCCCC
Confidence            9999999999999999998899999999999999999999999999999999987522222346899999999997653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	549
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	5e-70

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  220 bits (561), Expect = 5e-70
 Identities = 77/164 (46%), Positives = 100/164 (60%), Gaps = 6/164 (3%)

Query: 1   MGRE----FASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLP 56
           MG +        SL PGFRF+PTDEEL+  YL RK          I   D+YK +PW LP
Sbjct: 4   MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP 63

Query: 57  DKSSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLV 116
           +K+     +KEWYFFS  D+KY NGSR NR    GYWK TG D+ +    + VG+KK LV
Sbjct: 64  NKA--LFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALV 121

Query: 117 YHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQK 160
           +++G+AP G +TNW+MHEYRL +          D +VLCRI++K
Sbjct: 122 FYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	549
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.5e-51  Score=380.42  Aligned_cols=155  Identities=48%  Similarity=0.921  Sum_probs=131.7

Q ss_pred             CCCCCCCCCceeCCChHHHHHHHHHHHhcCCCCCCCCeeecCCCCCCCCCCCcccccCCCCcceEeeeccccccCCCCcc
Q 008907            5 FASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSSLKTRDKEWYFFSMLDKKYGNGSRT   84 (549)
Q Consensus         5 ~~~~~LPPGfRF~PTDEELV~~YLkrKi~G~plp~d~I~evDVY~~ePWdLP~~s~~~~~d~eWYFFspr~kKy~nG~R~   84 (549)
                      ..+++|||||||||||||||.|||++|+.|.+++.++|+++|||+++||+||+.+.  .++++||||+++++++++|.|.
T Consensus        12 ~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~--~~~~~wyFft~~~~k~~~g~r~   89 (166)
T d1ut7a_          12 LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKAL--FGEKEWYFFSPRDRKYPNGSRP   89 (166)
T ss_dssp             CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSS--SCSSEEEEEEECCC-------C
T ss_pred             cccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhc--cCcceEEEEeeeccccCCCCcc
Confidence            35689999999999999999999999999999999999999999999999998764  3577899999999999999999


Q ss_pred             ccccccceeeecCCceeeecCCeeEEEEEEEEeecCCCCCCCccCeEEEEEEeCCCchhhcCCCCCceEEEEeeccc
Q 008907           85 NRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDTFVLCRIFQKS  161 (549)
Q Consensus        85 nRatggGyWKatGk~r~I~~~g~vVG~KKtLvFy~Grap~G~KT~WvMhEYrL~~~~l~~ag~~qd~~VLCRIf~K~  161 (549)
                      +|+|++|+||++|++++|..+|++||+||+|+||.++++++.||+|+||||+|.+..........++|||||||+|+
T Consensus        90 ~R~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_          90 NRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             CEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC
T ss_pred             ccccCCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccccCccccCCEEEEEEEecC
Confidence            99999999999999999999999999999999999999999999999999999987644444456789999999874