Citrus Sinensis ID: 008963


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------
MGRYYYQRYLKLKKAMQQIPFREHFVNDGDGDDDDDEESRAGAAALVFVCAPPSYHNKRSSSTTSRTKLLSLLLLSLLSCTFILTPHALSLFYSFGAEDEGLVAADVNAPLCSSISNGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRISQNCHHQSQ
ccccHHHHHHHHHHcccccccccccccccccccccHHHHHHccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEccccccccEEEEcccEEEEccccEEEEEEcccccccccccHHHHHHcccccccccccccccccccccEEEEcccccccccccccccEEEEccEEEEEEcccccccHHHHHHHHHHHHHHccccccEEEEEEEcccccccccHHHHHHHHcccccccccccccEEEEccEEEEcEEccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccccccccccccccEEEEEEcccccccccHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHcccEEEEEcHHHHHHHcccccccEEEEEEEccccccccccHHHHHHHccccEEEEEEcccccccccccccccccccccccccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHcccccccccc
ccccccEEEHHcccccccEcccccEcccccccccccHHHHcccHHHHEEccccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHccccccccccccHHcccccccccccccEEEccccccccEEEEEccEEEcccccEEEEEccccccccccccccccccccccEEccccccccHHHHcccEEEEEEEcccccccccccccEccccEEEEEccccccccccccccEEEEEEEEHHHccccEEEEEEcccHHHHHHHHHHHHHHccccEEEccccccEEccccEEEEEEccccccEccccccccccHHHHHHHHHHHHccccHccccccccHHHHHcccccccccccccccccccccccccEEEEEEccccEEEEcHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHcccEEEEEcccccHcEEEcccccEEEEEEcccHHHHHHHHccccHHHcccEEEEEEEccccccHHHHccccccccccHHHHHHccHHHHHHHHHccccEEEcHHHHHHHHHHHHHHHHHHHHcccccccc
MGRYYYQRYLKLKKAMQqipfrehfvndgdgdddddeeSRAGAAALVFvcappsyhnkrsssttSRTKLLSLLLLSLLSCTFILTPHALSLfysfgaedeglvaadvnaplcssisngticcdrsgirtdvcimkgdvrtnsassSIFLYKNTNGFINYVSSMVEEKelqhekirpytrkwetsVMDTIDELDLVVKKEnetanhhcdvvhdvpavffstggytgnvyhefndgilplyitsqHLKKKVVFVILEYHNWWIMKYGDILsrlsdyppidfsgdkrthcfpeaivglrihdeltvdpslmrgnknaidFRNVLDQAYWPRIRGLIQDEEREAREklslspssdpsfknvkevqgdqskkpklvILSRngsraitnenSLVKMAEDIgfqvqvvrpdrTSELAKIYRALNSSDVMVGVHGAAMTHFlfmkpgsvfiqviplgtdwaaetyygeparklglkyigytilpresslydqydkndpvlrdpssvnekgwQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSInrisqnchhqsq
MGRYYYQRYLKLKKAMQQIPFREHFVNDGDGDDDDDEESRAGAAALVfvcappsyhnkrsssttSRTKLLSLLLLSLLSCTFILTPHALSLFYSFGAEDEGLVAADVNAPLCSSisngticcdrsgIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKelqhekirpytrkwetsvmDTIDELDLVVKKENEtanhhcdvvhDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSlmrgnknaIDFRNVLDQAYWPRIRGLIQDEEREAREKlslspssdpsfknvkevqgdqskkpklvilsrngsraitnenslvkmaediGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKndpvlrdpssvnekgWQYTKtiyldgqnvrlNLRRFQKRLVRAYDYSinrisqnchhqsq
MGryyyqrylklkkAMQQIPFREHFVNdgdgdddddEESRAGAAALVFVCAPPSYHNkrsssttsrtkllsllllsllsCTFILTPHALSLFYSFGAEDEGLVAADVNAPLCSSISNGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRISQNCHHQSQ
***YYYQRYLKLKKAMQQIPFREHFV*****************AALVFVCAP**************TKLLSLLLLSLLSCTFILTPHALSLFYSFGAEDEGLVAADVNAPLCSSISNGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLI***************************************************NSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYD***********VNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRIS********
*****YQRYLKLKKAMQQI***********************************************TKLLSLLLLSLLSCTFILTPHAL******************************ICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNG****************EKIRPYTRKWETSVMDTIDELDLVVK******NHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVK****DQSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDY**************
MGRYYYQRYLKLKKAMQQIPFREHFVNDG***********AGAAALVFVCAPPS***********RTKLLSLLLLSLLSCTFILTPHALSLFYSFGAEDEGLVAADVNAPLCSSISNGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEE****************************KKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRIS********
**RYYYQRYLKLKKAMQQIPFREHFVND****DDDDEESRAGAAALVFVCAPPSYHNKRSSSTTSRTKLLSLLLLSLLSCTFILTPHALSLFYS***********************GTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNT*****************HEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLI*******************************SKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRI*********
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGRYYYQRYLKLKKAMQQIPFREHFVNDGDGDDDDDEESRAGAAALVFVCAPPSYHNKRSSSTTSRTKLLSLLLLSLLSCTFILTPHALSLFYSFGAEDEGLVAADVNAPLCSSISNGTICCDRSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINRISQNCHHQSQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query547 2.2.26 [Sep-21-2011]
A0JND3527 EGF domain-specific O-lin yes no 0.478 0.497 0.255 2e-11
Q5NDL2527 EGF domain-specific O-lin yes no 0.462 0.480 0.251 1e-10
Q5NDL1527 EGF domain-specific O-lin yes no 0.462 0.480 0.251 1e-10
Q5NDL0527 EGF domain-specific O-lin yes no 0.500 0.519 0.250 2e-10
Q5NDL9527 EGF domain-specific O-lin yes no 0.462 0.480 0.248 1e-09
Q8BYW9527 EGF domain-specific O-lin yes no 0.499 0.518 0.244 2e-09
Q5NDL3535 EGF domain-specific O-lin yes no 0.482 0.493 0.241 4e-09
Q5NDE3 579 Glycosyltransferase-like N/A no 0.405 0.383 0.242 3e-07
Q08CY9525 EGF domain-specific O-lin yes no 0.414 0.432 0.243 1e-06
Q5NDE4 590 Glycosyltransferase-like N/A no 0.376 0.349 0.221 3e-06
>sp|A0JND3|EOGT_BOVIN EGF domain-specific O-linked N-acetylglucosamine transferase OS=Bos taurus GN=EOGT PE=2 SV=1 Back     alignment and function desciption
 Score = 70.9 bits (172), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 138/321 (42%), Gaps = 59/321 (18%)

Query: 207 CDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKV---VFVILEYHNWWIMK 263
           CD+V + P  F        N+YH F D I  LYIT QH+       V+V++    W    
Sbjct: 227 CDIVIEKPTYFMKLDAGV-NMYHHFCDFI-NLYIT-QHVNNSFSTDVYVVM----WDTSS 279

Query: 264 YG------DILSRLSDYPPIDF-SGDKRTHCFPEAIVGL--RIHDELTVDPSLMRGNKNA 314
           YG      D     +DY  I   + D +  CF EAI  L  R+   L  +  L+ G +N 
Sbjct: 280 YGYGDLFSDTWKAFTDYDVIHLKTYDAKRVCFKEAIFSLLPRMRYGLFYNTPLISGCQNT 339

Query: 315 IDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSKKPKLVILS 374
                           GL +   +    +L+++             +G +  K ++ IL+
Sbjct: 340 ----------------GLFRAFSQHVLHRLNITQ------------EGPKGGKIRVTILA 371

Query: 375 RNGS-RAITNENSLVKMAEDIG-FQVQVVRPDRTSELAKI--YRALNSSDVMVGVHGAAM 430
           R+   R I N+N LV   + +  F+VQ+V   +  EL  +   R  +++D+ +G+HGA +
Sbjct: 372 RSTEYRKILNQNELVNALKTVSTFEVQIV-DYKYKELGFLDQLRITHNTDIFIGMHGAGL 430

Query: 431 THFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDP 490
           TH LF+   +   ++   G     E  Y + AR  G+ YI +    R++ ++ Q   + P
Sbjct: 431 THLLFLPDWAAVFELYNCGD----ERCYLDLARLRGVHYITWR---RQNKVFPQDKGHHP 483

Query: 491 VLRDPSSVNEKGWQYTKTIYL 511
            L +        +   + +YL
Sbjct: 484 TLGEHPKFTNYSFDVEEFMYL 504





Bos taurus (taxid: 9913)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -
>sp|Q5NDL2|EOGT_HUMAN EGF domain-specific O-linked N-acetylglucosamine transferase OS=Homo sapiens GN=EOGT PE=2 SV=1 Back     alignment and function description
>sp|Q5NDL1|EOGT_PANTR EGF domain-specific O-linked N-acetylglucosamine transferase OS=Pan troglodytes GN=EOGT PE=2 SV=1 Back     alignment and function description
>sp|Q5NDL0|EOGT_RAT EGF domain-specific O-linked N-acetylglucosamine transferase OS=Rattus norvegicus GN=Eogt PE=2 SV=1 Back     alignment and function description
>sp|Q5NDL9|EOGT_CANFA EGF domain-specific O-linked N-acetylglucosamine transferase OS=Canis familiaris GN=EOGT PE=2 SV=1 Back     alignment and function description
>sp|Q8BYW9|EOGT_MOUSE EGF domain-specific O-linked N-acetylglucosamine transferase OS=Mus musculus GN=Eogt PE=1 SV=1 Back     alignment and function description
>sp|Q5NDL3|EOGT_CHICK EGF domain-specific O-linked N-acetylglucosamine transferase OS=Gallus gallus GN=EOGT PE=2 SV=2 Back     alignment and function description
>sp|Q5NDE3|GTDC2_TETNG Glycosyltransferase-like domain-containing protein 2 OS=Tetraodon nigroviridis GN=gtdc2 PE=2 SV=1 Back     alignment and function description
>sp|Q08CY9|EOGT_XENTR EGF domain-specific O-linked N-acetylglucosamine transferase OS=Xenopus tropicalis GN=eogt PE=2 SV=1 Back     alignment and function description
>sp|Q5NDE4|GTDC2_TAKRU Glycosyltransferase-like domain-containing protein 2 OS=Takifugu rubripes GN=gtdc2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query547
255585488533 glycosyltransferase, putative [Ricinus c 0.957 0.983 0.652 0.0
317106706530 JHL06B08.8 [Jatropha curcas] 0.936 0.966 0.670 0.0
356504769537 PREDICTED: uncharacterized glycosyltrans 0.904 0.921 0.669 0.0
224139884444 predicted protein [Populus trichocarpa] 0.780 0.961 0.770 0.0
356572020530 PREDICTED: uncharacterized glycosyltrans 0.914 0.943 0.666 0.0
357509679541 Glycosyltransferase [Medicago truncatula 0.879 0.889 0.661 0.0
56409840541 glycosyltransferase [Medicago truncatula 0.879 0.889 0.659 0.0
224086964413 predicted protein [Populus trichocarpa] 0.747 0.990 0.782 0.0
225441880529 PREDICTED: uncharacterized protein LOC10 0.937 0.969 0.637 0.0
297817062512 hypothetical protein ARALYDRAFT_486181 [ 0.862 0.921 0.607 1e-179
>gi|255585488|ref|XP_002533436.1| glycosyltransferase, putative [Ricinus communis] gi|223526710|gb|EEF28943.1| glycosyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/550 (65%), Positives = 433/550 (78%), Gaps = 26/550 (4%)

Query: 5   YYQRYLKLKKAMQQIPFREHFVNDGDGDDDDDEESRAGAAALVFVCAPPSYHNKRSSSTT 64
           +Y RY +LKK      +  H    G+ D +          AL  VC    Y+ ++     
Sbjct: 3   HYHRYSQLKKD----EYHHHQQQHGEEDIE----------ALALVCGNSGYYKRKRPKLL 48

Query: 65  SRTKLLSLLLLSLLSCTFILTPHALSLFYSFGAEDEGLVA-ADVNAPLCSSISNGTICCD 123
           S   L  L    +L+  F  +  A SL YSF  E +G++   DVNA LCSSISNGT+CCD
Sbjct: 49  SLLFLSLLCCCLILAPHFFCSSSAFSLLYSFVVETDGVIGDVDVNASLCSSISNGTMCCD 108

Query: 124 RSGIRTDVCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEE-KELQHEKIRPYTRKWE 182
           R   R+D+CIMKGD+RT+SASSS+ LY + N      SS++++ +E+QHEKI+PYTRKWE
Sbjct: 109 RRSFRSDICIMKGDIRTHSASSSVLLYTSRN-----TSSLIKDNEEIQHEKIKPYTRKWE 163

Query: 183 TSVMDTIDELDLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITS 242
           TSVM TID+LDL++K+E  + NH CDV HDVPAVFFSTGGYTGNVYHEFNDGI+PLYITS
Sbjct: 164 TSVMGTIDQLDLILKQEKSSVNHRCDVKHDVPAVFFSTGGYTGNVYHEFNDGIVPLYITS 223

Query: 243 QHLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELT 302
           QHLK+KVVFVILEYH WW+MKYGDILSRLSDYP ID+SGDKRTHCFPEAIVGLRIHDELT
Sbjct: 224 QHLKRKVVFVILEYHTWWMMKYGDILSRLSDYPAIDYSGDKRTHCFPEAIVGLRIHDELT 283

Query: 303 VDPSLMRGNKNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLS-----LSPSSDPSFKNV 357
           VD SLM+GNK+ +DF N+LD+AY PRI+GLI++EE EA +KL      LSPSS+   +  
Sbjct: 284 VDSSLMKGNKSIVDFHNLLDKAYRPRIKGLIREEEHEALKKLKQKVLPLSPSSETLLEFR 343

Query: 358 KEVQGDQSKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALN 417
           K+VQ  + K+PKLVILSRN SRAITNE+ LVKMAE IGF+V+V+RP+RT+ELAKIYRALN
Sbjct: 344 KDVQESKHKRPKLVILSRNASRAITNEDLLVKMAEGIGFRVEVLRPERTTELAKIYRALN 403

Query: 418 SSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYTILPR 477
           SS+VM+GVHGAAMTHFLFMKPGSVFIQVIPLGT+WAAETYYGEPARKLGLKYIGY ILPR
Sbjct: 404 SSEVMIGVHGAAMTHFLFMKPGSVFIQVIPLGTEWAAETYYGEPARKLGLKYIGYQILPR 463

Query: 478 ESSLYDQYDKNDPVLRDPSSVNEKGWQYTKTIYLDGQNVRLNLRRFQKRLVRAYDYSINR 537
           ESSLYD+YDKNDPVL+DP+S++ KGWQYTKTIYLD QNVRL+L RFQK+LV AY++S+ +
Sbjct: 464 ESSLYDKYDKNDPVLQDPASISNKGWQYTKTIYLDSQNVRLDLERFQKQLVLAYEHSMKK 523

Query: 538 ISQNCHHQSQ 547
           ++ +  H S 
Sbjct: 524 MNHSSRHHSH 533




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317106706|dbj|BAJ53206.1| JHL06B08.8 [Jatropha curcas] Back     alignment and taxonomy information
>gi|356504769|ref|XP_003521167.1| PREDICTED: uncharacterized glycosyltransferase AGO61-like [Glycine max] Back     alignment and taxonomy information
>gi|224139884|ref|XP_002323324.1| predicted protein [Populus trichocarpa] gi|222867954|gb|EEF05085.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356572020|ref|XP_003554168.1| PREDICTED: uncharacterized glycosyltransferase AGO61-like [Glycine max] Back     alignment and taxonomy information
>gi|357509679|ref|XP_003625128.1| Glycosyltransferase [Medicago truncatula] gi|355500143|gb|AES81346.1| Glycosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|56409840|emb|CAI30145.1| glycosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|224086964|ref|XP_002308019.1| predicted protein [Populus trichocarpa] gi|222853995|gb|EEE91542.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225441880|ref|XP_002284307.1| PREDICTED: uncharacterized protein LOC100245312 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297817062|ref|XP_002876414.1| hypothetical protein ARALYDRAFT_486181 [Arabidopsis lyrata subsp. lyrata] gi|297322252|gb|EFH52673.1| hypothetical protein ARALYDRAFT_486181 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query547
TAIR|locus:2062709500 AT2G41640 [Arabidopsis thalian 0.455 0.498 0.630 2.9e-159
TAIR|locus:2082598504 AT3G57380 [Arabidopsis thalian 0.462 0.501 0.634 1.3e-156
TAIR|locus:2076274494 AT3G10320 [Arabidopsis thalian 0.661 0.732 0.638 2.6e-127
TAIR|locus:2063793452 AT2G03370 [Arabidopsis thalian 0.307 0.371 0.438 9.7e-72
TAIR|locus:2063809455 AT2G03360 [Arabidopsis thalian 0.301 0.362 0.416 1.1e-70
TAIR|locus:2092757384 AT3G18170 [Arabidopsis thalian 0.301 0.429 0.380 1.3e-57
TAIR|locus:2092762470 AT3G18180 [Arabidopsis thalian 0.310 0.361 0.375 4.2e-28
UNIPROTKB|F1SFQ3527 EOGT "Uncharacterized protein" 0.246 0.256 0.288 2.6e-11
UNIPROTKB|Q5NDL9527 EOGT "EGF domain-specific O-li 0.268 0.278 0.25 7e-10
WB|WBGene00010386523 H12D21.10 [Caenorhabditis eleg 0.303 0.317 0.247 4.7e-08
TAIR|locus:2062709 AT2G41640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 871 (311.7 bits), Expect = 2.9e-159, Sum P(2) = 2.9e-159
 Identities = 169/268 (63%), Positives = 206/268 (76%)

Query:    80 CTFILTPH------ALSLFYSFGAEDEGLVAAD-VNAPLCSSISNGTICCDRSGIRTDVC 132
             C F+L+P+       LSL  SF  E EGL + + V  PLCS ISNGTICCDR+G+R+D+C
Sbjct:    52 CCFVLSPYYLFGFSTLSLLDSFRREIEGLSSYEPVITPLCSEISNGTICCDRTGLRSDIC 111

Query:   133 IMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDEL 192
             +MKGDVRTNSASSSIFL+ ++                + EKI+PYTRKWETSVMDT+ EL
Sbjct:   112 VMKGDVRTNSASSSIFLFTSSTN-----------NNTKPEKIKPYTRKWETSVMDTVQEL 160

Query:   193 DLVVKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQHLKKKVVFV 252
             +L+ K  N++++  CDV HDVPAVFFSTGGYTGNVYHEFNDGI+PL+ITSQH  KKVVFV
Sbjct:   161 NLITKDSNKSSDRVCDVYHDVPAVFFSTGGYTGNVYHEFNDGIIPLFITSQHYNKKVVFV 220

Query:   253 ILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCFPEAIVGLRIHDELTVDPSLMRGNK 312
             I+EYH+WW MKYGD++S+LSDYP +DF+GD RTHCF EA VGLRIHDELTV+ SL+ GN+
Sbjct:   221 IVEYHDWWEMKYGDVVSQLSDYPLVDFNGDTRTHCFKEATVGLRIHDELTVNSSLVIGNQ 280

Query:   313 NAIDFRNVLDQAYWPRIRGLIQDEEREA 340
               +DFRNVLD+ Y  RI+ L Q EE EA
Sbjct:   281 TIVDFRNVLDRGYSHRIQSLTQ-EETEA 307


GO:0005576 "extracellular region" evidence=ISM
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA
GO:0010200 "response to chitin" evidence=RCA
TAIR|locus:2082598 AT3G57380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076274 AT3G10320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063793 AT2G03370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063809 AT2G03360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092757 AT3G18170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092762 AT3G18180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1SFQ3 EOGT "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q5NDL9 EOGT "EGF domain-specific O-linked N-acetylglucosamine transferase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
WB|WBGene00010386 H12D21.10 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query547
pfam04577206 pfam04577, DUF563, Protein of unknown function (DU 4e-16
COG4421368 COG4421, COG4421, Capsular polysaccharide biosynth 5e-04
>gnl|CDD|218156 pfam04577, DUF563, Protein of unknown function (DUF563) Back     alignment and domain information
 Score = 76.7 bits (189), Expect = 4e-16
 Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 12/113 (10%)

Query: 365 SKKPKLVILSR--NGSRAITNENSLVKMAEDIGFQVQVVRPDRTS--ELAKIYRALNSSD 420
             KP+ V +SR   G R I NE+ L +     GF++  V P+  S  E  K++    S+ 
Sbjct: 99  KIKPRKVYISRKKAGRRRILNEDELEEALPKYGFEI--VDPETLSLEEQVKLFS---SAK 153

Query: 421 VMVGVHGAAMTHFLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYIGYT 473
           V+VG HG+A+T+ +FM PG+  ++++P       +  +   A  LGL Y    
Sbjct: 154 VIVGPHGSALTNLIFMPPGTGVVELVPPNR---LDPSFRNLAALLGLDYYYVY 203


Family of uncharacterized proteins. Length = 206

>gnl|CDD|226845 COG4421, COG4421, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 547
KOG4698475 consensus Uncharacterized conserved protein [Funct 100.0
PF04577206 DUF563: Protein of unknown function (DUF563); Inte 99.95
COG4421368 Capsular polysaccharide biosynthesis protein [Carb 99.7
>KOG4698 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=5e-83  Score=675.16  Aligned_cols=443  Identities=46%  Similarity=0.737  Sum_probs=391.2

Q ss_pred             cCCCCcccccchHHHHHHHHHHhHhhcccchh------hhhhccCcccccccc-cccCCCCCcCCCCCceeecCCCCCcc
Q 008963           58 KRSSSTTSRTKLLSLLLLSLLSCTFILTPHAL------SLFYSFGAEDEGLVA-ADVNAPLCSSISNGTICCDRSGIRTD  130 (547)
Q Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~Cd~s~~r~d  130 (547)
                      |+...+...|+..+-=+++++.+|++..|..+      ..+....++.++... +....++|+..+++.++||+++.++|
T Consensus        17 ~~~~~~~~~~~~f~~~~~~vl~~~~v~kp~~l~~~~~~~~~~tg~~~~~~~~~~~~~~q~~~~~~e~~~~~C~~~g~~s~   96 (475)
T KOG4698|consen   17 KKNLLGLLIYGVFHSSLLSVLPKCVVVKPYLLLLPRFQPDLPTGSFEDELLPLSQLLRQPPGSALEDSSFFCDRSGTRSD   96 (475)
T ss_pred             hhcCccceecCcchhhhhhhcccceecCCeecccCccccCcccceeeccCCChhhcccCCCCcccCCceEEeeccccccc
Confidence            33334444455544447788888999888773      222222355554444 45557899999999999999999999


Q ss_pred             eeEEeCcEEeeCCCceEEEEecCCCcccccccchhhcccceeeecCCCCCCcccccCccceeEEEeccCCCcCCCCCcee
Q 008963          131 VCIMKGDVRTNSASSSIFLYKNTNGFINYVSSMVEEKELQHEKIRPYTRKWETSVMDTIDELDLVVKKENETANHHCDVV  210 (547)
Q Consensus       131 ~C~~~GdvR~~~~~~tv~l~~~~~~~~~~~~~~~~~~~~~~~~irPY~RK~e~~~m~~v~Evtv~~~~~~~~~~p~C~v~  210 (547)
                      +|+|+||+|+|+.++|+++....--         ++-.+.+|+||||+||||..+|..|+|+++...+.+  ...+|+++
T Consensus        97 ~c~~kg~~r~h~~~~~~~~~~~~~~---------~~s~~~~e~ikpy~rk~~~~vmp~vre~~l~~~~~~--~~r~c~v~  165 (475)
T KOG4698|consen   97 FCEMKGDVRTHPDSSTVLLTLGRLL---------TFSGRLVEKIKPYTRKGETWVMPEVRELNLLVRPGS--EIRRCDVN  165 (475)
T ss_pred             hhhhcCccccCcchhhhhhhccchh---------hhccccchhcccccccccccccccccccceEEcCCc--ccceeeee
Confidence            9999999999999999987765311         011357999999999999999999999999988743  46789999


Q ss_pred             eecceEEEEcCCccccccchhhhhhhhHHHHHh--hhCCeeEEEEEcccchhhccHHHHHhhcCCCCCcccCCCCcceec
Q 008963          211 HDVPAVFFSTGGYTGNVYHEFNDGILPLYITSQ--HLKKKVVFVILEYHNWWIMKYGDILSRLSDYPPIDFSGDKRTHCF  288 (547)
Q Consensus       211 h~~Pavvfs~gGytgN~fH~f~D~liPLfiT~~--~f~~eVq~vv~d~~~ww~~kY~~ll~~LS~y~vIdl~~d~~v~CF  288 (547)
                      |++||+||++|||+||.||+|+|+++|||+|.+  .|+++||+|+++.++||+.||.+++++||+||+++++++..+|||
T Consensus       166 ~~~pa~vfs~Gg~tgn~yhdf~d~~ipL~it~~~~~~n~ev~~li~~~~~ww~~kf~Dvv~~lSn~~~v~~~~~~~ThcF  245 (475)
T KOG4698|consen  166 HEVPAIVFSTGGYTGNEYHDFNDGIIPLFITEAELRFNKEVQFLITETHSWWDMKFGDVVRQLSNYPVVDFDAELRTHCF  245 (475)
T ss_pred             cccchheeecCCcchhhHHHHHhhhhhhhcccchhcccccEEEEEEEcchhhhhhHHHHHHhcCCCceEEecCCceEEEe
Confidence            999999999999999999999999999999999  789999999999999999999999999999999999999999999


Q ss_pred             CeeEEccccccccccCCCCCCCC--cchHHHHHHHHHhhccccccccchHHHHHHHhccCCCCCCCCCCccccccCCCCC
Q 008963          289 PEAIVGLRIHDELTVDPSLMRGN--KNAIDFRNVLDQAYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSK  366 (547)
Q Consensus       289 ~~aiVGL~~h~~L~idp~~~p~~--~si~dFr~FLr~ay~~r~~~L~~~~~r~~~~~l~i~ps~~~~~~~~~~~~~~~~~  366 (547)
                      .+++|||..|.++++||...+++  ++|.+|++||+.+|++|+...            +++             .....+
T Consensus       246 ~~~~vgL~~h~~y~v~~t~~~~~~~~s~~~fr~~l~~a~~~~i~~~------------~~t-------------~~~~~k  300 (475)
T KOG4698|consen  246 KEAIVGLVSHFPYAVNPTQPPPNGTLSMLDFRNLLDKALSPRIPEA------------NVT-------------APEPWK  300 (475)
T ss_pred             eeeeeeeeecccccccCCcCCCccccccccHHHHHHHHhccccccc------------ccC-------------CcChhh
Confidence            99999999999999999998866  899999999999998775311            100             123456


Q ss_pred             CCEEEEEecCCCccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhhhhhhhccCCCcEEEEEe
Q 008963          367 KPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLFMKPGSVFIQVI  446 (547)
Q Consensus       367 rprlliIsR~~sR~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAGLTN~lFmppga~vIEI~  446 (547)
                      +||+++++|.++|.|+|++||.+++++.||+|.+++++. .++.+|+++.+++|||||||||||||++|+||++++|||.
T Consensus       301 kpri~~lsR~~~r~Ilne~el~~~~~~~gf~v~~~~~~~-t~v~~~~~i~~s~~vmiGvHGa~lth~lfl~~~~~~iqi~  379 (475)
T KOG4698|consen  301 KPRITILSRAGSRAILNEDELPRMLEDIGFEVSVLRPDR-TEVAKQLRITNSSDVMIGVHGAGLTHLLFLPPWAGVIQIY  379 (475)
T ss_pred             CCceEEEecccchhhhcchhhhHHHHhCCCceEEecccc-cchhhhhheeeccceeeeccCccceeEEecCCcceEEEEE
Confidence            899999999999999999999999999999999999854 9999999999999999999999999999999999999999


Q ss_pred             cCC-CCccccchHHHHHhhcCCeEEEEEecCCCCcccccCCCCCCccCCCCcccccCcceee-eeecCCccEEEehHHHH
Q 008963          447 PLG-TDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSVNEKGWQYTK-TIYLDGQNVRLNLRRFQ  524 (547)
Q Consensus       447 P~g-~~~~~~~~Y~~lA~~~Gl~Y~~y~i~~eEssL~~~y~~dhpv~~dP~~i~~kgW~~~~-~~YL~~QnV~lDi~rF~  524 (547)
                      |+| .+|.+..+|..+|+.|+++|.+|+|.++|++|+++|++||+++.||.+..++||+..+ .+||..|+|++|+.||+
T Consensus       380 pcg~~~w~a~~a~~~p~k~~~l~y~~ykI~~~es~l~~~y~~d~~~v~dp~s~~~~~f~~~k~~~yl~~q~v~ld~nRf~  459 (475)
T KOG4698|consen  380 PCGDPGWAAKLARLRPAKYMTLEYAEYKIRAEESELYHKYGGDNTIVFDPISFQKKGFEETKKKVYLELQAVRLDINRFR  459 (475)
T ss_pred             ECCCccchhhhhhccccceeccccceeEEeecccceeeeccCCCceecccceeccccceeeeeeeeEeEeeeehhhhhcc
Confidence            999 8999999999999999999999999999999999999999999999999999999988 89999999999999999


Q ss_pred             HHHHHHHHHHHhh
Q 008963          525 KRLVRAYDYSINR  537 (547)
Q Consensus       525 ~~L~~A~~~l~~~  537 (547)
                      +.+.+|++..+.+
T Consensus       460 ~~~~~a~~~~~~~  472 (475)
T KOG4698|consen  460 KTLVKAYLKEITQ  472 (475)
T ss_pred             cchhHHHHHHHHh
Confidence            9999999887765



>PF04577 DUF563: Protein of unknown function (DUF563); InterPro: IPR007657 This is a family of uncharacterised glycosyltransferases belonging to glycosyltransferase family 61 Back     alignment and domain information
>COG4421 Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query547
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-07
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 51.0 bits (121), Expect = 9e-07
 Identities = 76/483 (15%), Positives = 151/483 (31%), Gaps = 130/483 (26%)

Query: 181 WETSVMDTIDELDLV-VKKENETANHHCDVVHDVPAVFFSTGGYTGNVYHEFND--GILP 237
           +ET       + D++ V ++    N  C  V D+P    S      ++    +   G L 
Sbjct: 9   FETGEHQYQYK-DILSVFEDAFVDNFDCKDVQDMPKSILSKEEID-HIIMSKDAVSGTLR 66

Query: 238 LYITSQHLKKKVV--FV--ILEYHNWWIM---------------KYGDILSRLSDYPPID 278
           L+ T    ++++V  FV  +L  +  ++M                Y +   RL +   + 
Sbjct: 67  LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV- 125

Query: 279 FSGDKRTHCFPEAIVGLRIH-DELTVDPSL----MRGN-K-----NAIDFRNVL----DQ 323
           F+  K      +  + LR    EL    ++    + G+ K     +      V      +
Sbjct: 126 FA--KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK 183

Query: 324 AYWPRIRGLIQDEEREAREKLSLSPSSDPSFKNVKEVQGDQSKKPKLVILSRNG--SRAI 381
            +W  +       E        L    DP++ +    + D S   KL I S      R +
Sbjct: 184 IFWLNL-KNCNSPETVLEMLQKLLYQIDPNWTS----RSDHSSNIKLRIHSIQAELRRLL 238

Query: 382 TNE---NSL-----VKMAEDI---GFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAM 430
            ++   N L     V+ A+         +++   R  ++     A  ++ + +  H   +
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298

Query: 431 THF----LFMK---------PGSVFIQVIPLGTDWAAETYYGEPAR-------------- 463
           T      L +K         P  V +   P      AE+     A               
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREV-LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357

Query: 464 --KLGLK----------YIGYTILPRE--------SSLYDQYDKNDPV-----LRDPSSV 498
             +  L           +   ++ P          S ++    K+D +     L   S V
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLV 417

Query: 499 NEKGWQYTKTI---YLDGQNVRLNLRRFQKRLVRAYD----YSINRISQNC--------- 542
            ++  + T +I   YL+ +    N     + +V  Y+    +  + +             
Sbjct: 418 EKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477

Query: 543 -HH 544
            HH
Sbjct: 478 GHH 480


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query547
d1gdha2129 D-glycerate dehydrogenase {Hyphomicrobium methylov 81.38
>d1gdha2 c.23.12.1 (A:2-100,A:292-321) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Formate/glycerate dehydrogenase catalytic domain-like
family: Formate/glycerate dehydrogenases, substrate-binding domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=81.38  E-value=3.8  Score=33.96  Aligned_cols=91  Identities=14%  Similarity=0.213  Sum_probs=65.2

Q ss_pred             CCEEEEEecCCCccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhhhhhhhc--cCCCcEEEE
Q 008963          367 KPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTHFLF--MKPGSVFIQ  444 (547)
Q Consensus       367 rprlliIsR~~sR~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAGLTN~lF--mppga~vIE  444 (547)
                      |||+++ .+    .+  .+++++.+++. |+|+....+..++-+|.++.+.++|++|...+..++.-+|  +|++=.+|-
T Consensus         1 K~kVli-t~----~~--~~~~~~~l~~~-~~v~~~~~~~~~s~~el~~~~~~~d~ii~~~~~~i~~~~l~~~~~~LK~I~   72 (129)
T d1gdha2           1 KKKILI-TW----PL--PEAAMARARES-YDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRIPENIKCIS   72 (129)
T ss_dssp             CCEEEE-SS----CC--CHHHHHHHHTT-SEEEECCSTTCCCHHHHHHHHTTCSEEEEETTSCBCHHHHHHSCTTCCEEE
T ss_pred             CCEEEE-eC----CC--CHHHHHHHHcC-CcEEEeCCCCCCCHHHHHHHhcCCCEEEEcCCchhhhHHHhhhhhcceeee
Confidence            577764 32    22  44677788765 5877655445688999999999999998888888999888  566777887


Q ss_pred             EecCCCCccccchHHHHHhhcCCeE
Q 008963          445 VIPLGTDWAAETYYGEPARKLGLKY  469 (547)
Q Consensus       445 I~P~g~~~~~~~~Y~~lA~~~Gl~Y  469 (547)
                      -+.-|+++..    -..|+..|+.-
T Consensus        73 ~~gvG~d~ID----~~~a~~~gI~V   93 (129)
T d1gdha2          73 TYSIGFDHID----LDACKARGIKV   93 (129)
T ss_dssp             EESSCCTTBC----HHHHHHTTCEE
T ss_pred             ecccCCcccc----HHHHHhCCCEE
Confidence            7777765443    24566677764