Citrus Sinensis ID: 009060

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-----
MDTANAMGSTGQPGSAPAPVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVGNGPSLGWVFMADFLSALAKKLRKNTTALENYRRIYVPPGIPVKRAQNEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVSIYKMCVYVTF
ccccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEcccccccHHHHccccccccEEEcccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHcccccEEEEEccccccccccccEEEEEccccccHHHHccccccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHcccEEEccccccccccccccccEEEccccccHHHHHHcccccEEEEEccccccccccccccccccccEEEEEccEEEEccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHccccccEEEEcccHHHHHccccccccccEEEEccccccHHHHHHHHHHHHHHcccccEEEEEcHHHHHHHHHHHHHHHHccccEEEEEEEccccEEEEEEccccccccccccHHHHHHHHccccccEEEEEEEEcccHHHHcc
ccccccccccccccccccccccccHHcEHHHHHHHHHHHccccEEEEccccccHHHHHHHccccccEEcccccHHHHHHHHHHHHHHHccEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccccccHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHHcccEEEEEEHHHHccEEEccEEccHHHHHccccccHHHHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHHcccEEEEHHHccccccccccEEEEEcHHHccccHHHHHHHccEEEEEccccEcccccccccccccccEEEEcccEEEEcccccccccEcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEccHHHHHHHHHHcccccEEEEEcccHHHHHHHccccccccEEEEcccccccccHHHHHHHHHHHccccEEEEEEEHHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHcccccHHHccccccHHHHHHHHHccccEEccHHHHHHHHHHHHcc
mdtanamgstgqpgsapapvrggasvgTLGRHLARRLVEIGakdvfsvpgdfnltlldhliaepelnlvgccnelnagyaadgyarsrgvGACVVTFTVGGLSVLNAIAGaysenlpvicivggpnsndygtnrilhhtiglpdftqELRCFQAITCSQAVVNNLGDAHELIDTAISTAlkeskpvyisiscnlpgiphptfardpvpfflapkvsnqLGLEAAVEATADFLNKAvkpvlvggpniRVAKAQKAFIELadatgypiaimpsgkglvpehhphfigtywgavssSFCGEIVesadayvfvgpifndyssvGYSLLIKKEKaiivqphrvtvgngpslgWVFMADFLSALAKKLRKNTTALenyrriyvppgipvkraqneplrVNVLFKHIQDMLSGDTAVIAETgdswfncqklrlpencgyefqmqYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLInnggytieveihdgpynviknwdYTGLVNaihngegkcwTAKVSIYKMCVYVTF
mdtanamgstgqpgsapapvrgGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVGNGPSLGWVFMADFLSALAKKLRKnttalenyrriyvppgipvkraqnePLRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVSIYKMCVYVTF
MDTANAMGSTGQPGSAPAPVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVGNGPSLGWVFMADFLSALAKKLRKNTTALENYRRIYVPPGIPVKRAQNEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVSIYKMCVYVTF
*************************VGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVGNGPSLGWVFMADFLSALAKKLRKNTTALENYRRIYVPPGIPVKRAQNEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVSIYKMCVYVT*
*****************************GRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARD***************LEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVGNGPSLGWVFMADFLSALAKKLRKNTTALENYRRIYV*************LRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVSIYKMCVYVTF
*********************GGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVGNGPSLGWVFMADFLSALAKKLRKNTTALENYRRIYVPPGIPVKRAQNEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVSIYKMCVYVTF
************************SVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVGNGPSLGWVFMADFLSALAKKLRKNTTALENYRRIYVPPGIPVKRAQNEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVSIYKMCVYVTF
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MDTANAMGSTGQPGSAPAPVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVGNGPSLGWVFMADFLSALAKKLRKNTTALENYRRIYVPPGIPVKRAQNEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVSIYKMCVYVTF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query545 2.2.26 [Sep-21-2011]
P51850593 Pyruvate decarboxylase is N/A no 0.977 0.898 0.871 0.0
A2XFI3606 Pyruvate decarboxylase is N/A no 0.946 0.851 0.820 0.0
Q10MW3605 Pyruvate decarboxylase is yes no 0.946 0.852 0.820 0.0
P28516610 Pyruvate decarboxylase is N/A no 0.928 0.829 0.822 0.0
A2Y5L9605 Pyruvate decarboxylase is N/A no 0.937 0.844 0.806 0.0
Q0DHF6605 Pyruvate decarboxylase is no no 0.937 0.844 0.804 0.0
P51846614 Pyruvate decarboxylase is N/A no 0.977 0.868 0.75 0.0
A2YQ76587 Pyruvate decarboxylase is N/A no 0.966 0.897 0.765 0.0
Q0D3D2587 Pyruvate decarboxylase is no no 0.966 0.897 0.763 0.0
P51845418 Pyruvate decarboxylase is N/A no 0.766 1.0 0.820 0.0
>sp|P51850|PDC1_PEA Pyruvate decarboxylase isozyme 1 OS=Pisum sativum GN=PDC1 PE=2 SV=1 Back     alignment and function desciption
 Score =  967 bits (2501), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/535 (87%), Positives = 503/535 (94%), Gaps = 2/535 (0%)

Query: 2   DTANAMGSTGQPGSAPA--PVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDH 59
           +T    GST  P SAP+  P+R  +  GT+GRHLARRLVEIG +DVFSVPGDFNLTLLDH
Sbjct: 4   ETETPNGSTPCPTSAPSAIPLRPSSCDGTMGRHLARRLVEIGVRDVFSVPGDFNLTLLDH 63

Query: 60  LIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVI 119
           LIAEPELNLVGCCNELNAGYAADGY R++GVGACVVTFTVGGLS+LNAIAGAYSENLPVI
Sbjct: 64  LIAEPELNLVGCCNELNAGYAADGYGRAKGVGACVVTFTVGGLSILNAIAGAYSENLPVI 123

Query: 120 CIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTA 179
           CIVGGPNSNDYGTNRILHHTIGLPDF+QEL+CFQ ITC QAVVNNL DAHELIDTAISTA
Sbjct: 124 CIVGGPNSNDYGTNRILHHTIGLPDFSQELQCFQTITCFQAVVNNLDDAHELIDTAISTA 183

Query: 180 LKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPV 239
           LKESKPVYISI CNLP IPHPTFARDPVPFFLAP+VSNQ GLEAAVE  A FLNKAVKPV
Sbjct: 184 LKESKPVYISIGCNLPAIPHPTFARDPVPFFLAPRVSNQAGLEAAVEEAAAFLNKAVKPV 243

Query: 240 LVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEI 299
           +VGGP +RVAKAQKAF+E A+A+GYPIA+MPSGKGLVPE+HPHFIGTYWGAVS+S+CGEI
Sbjct: 244 IVGGPKLRVAKAQKAFMEFAEASGYPIAVMPSGKGLVPENHPHFIGTYWGAVSTSYCGEI 303

Query: 300 VESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVGNGPSLGWVFMADFLSALA 359
           VESADAYVFVGPIFNDYSSVGYSLLIKKEK++IVQP+RVT+GNG SLGWVFMADFL+ALA
Sbjct: 304 VESADAYVFVGPIFNDYSSVGYSLLIKKEKSLIVQPNRVTIGNGLSLGWVFMADFLTALA 363

Query: 360 KKLRKNTTALENYRRIYVPPGIPVKRAQNEPLRVNVLFKHIQDMLSGDTAVIAETGDSWF 419
           KK++ NTTA+ENYRRIYVPPGIP+KR ++EPLRVNVLFKHIQ ++SGDTAVIAETGDSWF
Sbjct: 364 KKVKTNTTAVENYRRIYVPPGIPLKREKDEPLRVNVLFKHIQALISGDTAVIAETGDSWF 423

Query: 420 NCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTM 479
           NCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAA DKRVIACIGDGSFQVTAQ+ISTM
Sbjct: 424 NCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAATDKRVIACIGDGSFQVTAQDISTM 483

Query: 480 IRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKV 534
           IRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTG V+AIHNG+GKCWTAKV
Sbjct: 484 IRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGFVSAIHNGQGKCWTAKV 538

Pisum sativum (taxid: 3888)
EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 1
>sp|A2XFI3|PDC2_ORYSI Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. indica GN=PDC2 PE=2 SV=2 Back     alignment and function description
>sp|Q10MW3|PDC2_ORYSJ Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. japonica GN=PDC2 PE=2 SV=1 Back     alignment and function description
>sp|P28516|PDC1_MAIZE Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PDC1 PE=2 SV=1 Back     alignment and function description
>sp|A2Y5L9|PDC1_ORYSI Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. indica GN=PDC1 PE=2 SV=1 Back     alignment and function description
>sp|Q0DHF6|PDC1_ORYSJ Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. japonica GN=PDC1 PE=2 SV=1 Back     alignment and function description
>sp|P51846|PDC2_TOBAC Pyruvate decarboxylase isozyme 2 OS=Nicotiana tabacum GN=PDC2 PE=2 SV=1 Back     alignment and function description
>sp|A2YQ76|PDC3_ORYSI Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. indica GN=PDC3 PE=2 SV=2 Back     alignment and function description
>sp|Q0D3D2|PDC3_ORYSJ Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. japonica GN=PDC3 PE=2 SV=1 Back     alignment and function description
>sp|P51845|PDC1_TOBAC Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nicotiana tabacum GN=PDC1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query545
70609688589 pyruvate decarboxylase [Citrus sinensis] 0.979 0.906 1.0 0.0
224116936593 predicted protein [Populus trichocarpa] 0.979 0.900 0.888 0.0
356549174589 PREDICTED: pyruvate decarboxylase isozym 0.979 0.906 0.885 0.0
224079117582 predicted protein [Populus trichocarpa] 0.952 0.891 0.895 0.0
449433768589 PREDICTED: pyruvate decarboxylase isozym 0.979 0.906 0.867 0.0
255563082589 pyruvate decarboxylase, putative [Ricinu 0.979 0.906 0.874 0.0
225443847577 PREDICTED: pyruvate decarboxylase isozym 0.939 0.887 0.890 0.0
1706326593 RecName: Full=Pyruvate decarboxylase iso 0.977 0.898 0.871 0.0
357446917582 Pyruvate decarboxylase [Medicago truncat 0.965 0.903 0.874 0.0
51587336580 pyruvate decarboxylase isozyme 1 [Lotus 0.963 0.905 0.835 0.0
>gi|70609688|gb|AAZ05069.1| pyruvate decarboxylase [Citrus sinensis] Back     alignment and taxonomy information
 Score = 1103 bits (2854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/534 (100%), Positives = 534/534 (100%)

Query: 1   MDTANAMGSTGQPGSAPAPVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHL 60
           MDTANAMGSTGQPGSAPAPVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHL
Sbjct: 1   MDTANAMGSTGQPGSAPAPVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHL 60

Query: 61  IAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVIC 120
           IAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVIC
Sbjct: 61  IAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVIC 120

Query: 121 IVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTAL 180
           IVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTAL
Sbjct: 121 IVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTAL 180

Query: 181 KESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVL 240
           KESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVL
Sbjct: 181 KESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVL 240

Query: 241 VGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIV 300
           VGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIV
Sbjct: 241 VGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIV 300

Query: 301 ESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVGNGPSLGWVFMADFLSALAK 360
           ESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVGNGPSLGWVFMADFLSALAK
Sbjct: 301 ESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVGNGPSLGWVFMADFLSALAK 360

Query: 361 KLRKNTTALENYRRIYVPPGIPVKRAQNEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFN 420
           KLRKNTTALENYRRIYVPPGIPVKRAQNEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFN
Sbjct: 361 KLRKNTTALENYRRIYVPPGIPVKRAQNEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFN 420

Query: 421 CQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMI 480
           CQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMI
Sbjct: 421 CQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMI 480

Query: 481 RCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKV 534
           RCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKV
Sbjct: 481 RCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKV 534

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224116936|ref|XP_002317431.1| predicted protein [Populus trichocarpa] gi|222860496|gb|EEE98043.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356549174|ref|XP_003542972.1| PREDICTED: pyruvate decarboxylase isozyme 1-like [Glycine max] Back     alignment and taxonomy information
>gi|224079117|ref|XP_002305755.1| predicted protein [Populus trichocarpa] gi|222848719|gb|EEE86266.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449433768|ref|XP_004134669.1| PREDICTED: pyruvate decarboxylase isozyme 1-like [Cucumis sativus] gi|449479245|ref|XP_004155547.1| PREDICTED: pyruvate decarboxylase isozyme 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255563082|ref|XP_002522545.1| pyruvate decarboxylase, putative [Ricinus communis] gi|223538236|gb|EEF39845.1| pyruvate decarboxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225443847|ref|XP_002275486.1| PREDICTED: pyruvate decarboxylase isozyme 1 [Vitis vinifera] gi|297740479|emb|CBI30661.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|1706326|sp|P51850.1|PDC1_PEA RecName: Full=Pyruvate decarboxylase isozyme 1; Short=PDC gi|1177603|emb|CAA91444.1| pyruvate decarboxylase [Pisum sativum] Back     alignment and taxonomy information
>gi|357446917|ref|XP_003593734.1| Pyruvate decarboxylase [Medicago truncatula] gi|355482782|gb|AES63985.1| Pyruvate decarboxylase [Medicago truncatula] Back     alignment and taxonomy information
>gi|51587336|emb|CAG30578.1| pyruvate decarboxylase isozyme 1 [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query545
TAIR|locus:2160170607 PDC2 "pyruvate decarboxylase-2 0.930 0.835 0.832 2.1e-235
TAIR|locus:2179132603 AT5G01320 [Arabidopsis thalian 0.979 0.885 0.781 1.5e-232
TAIR|locus:2123827607 AT4G33070 [Arabidopsis thalian 0.930 0.835 0.808 1.4e-231
TAIR|locus:2179147592 PDC3 "pyruvate decarboxylase-3 0.954 0.878 0.779 3.1e-225
POMBASE|SPAC1F8.07c569 SPAC1F8.07c "pyruvate decarbox 0.908 0.869 0.446 9.7e-112
POMBASE|SPAC186.09572 SPAC186.09 "pyruvate decarboxy 0.908 0.865 0.436 2e-111
SGD|S000004124563 PDC5 "Minor isoform of pyruvat 0.888 0.859 0.365 5.9e-78
TIGR_CMR|BA_2486561 BA_2486 "indolepyruvate decarb 0.911 0.885 0.345 1.2e-74
UNIPROTKB|O53865560 kdc "Alpha-keto-acid decarboxy 0.889 0.866 0.371 1.1e-73
SGD|S000003319563 PDC6 "Minor isoform of pyruvat 0.893 0.865 0.353 7.5e-73
TAIR|locus:2160170 PDC2 "pyruvate decarboxylase-2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2270 (804.1 bits), Expect = 2.1e-235, P = 2.1e-235
 Identities = 422/507 (83%), Positives = 462/507 (91%)

Query:    28 TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARS 87
             TLGR+LARRLVEIG  DVFSVPGDFNLTLLDHLIAEP L L+GCCNELNAGYAADGYARS
Sbjct:    46 TLGRYLARRLVEIGVTDVFSVPGDFNLTLLDHLIAEPNLKLIGCCNELNAGYAADGYARS 105

Query:    88 RGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQ 147
             RGVGACVVTFTVGGLSVLNAIAGAYSENLP+ICIVGGPNSNDYGTNRILHHTIGLPDFTQ
Sbjct:   106 RGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFTQ 165

Query:   148 ELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPV 207
             ELRCFQA+TC QAV+NNL +AHELIDTAISTALKESKPVYISISCNLP IP PTF+R PV
Sbjct:   166 ELRCFQAVTCFQAVINNLEEAHELIDTAISTALKESKPVYISISCNLPAIPLPTFSRHPV 225

Query:   208 PFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIA 267
             PF L  KVSNQ+GL+AAVEA A+FLNKAVKPVLVGGP +RVAKA  AF+ELADA+GY +A
Sbjct:   226 PFMLPMKVSNQIGLDAAVEAAAEFLNKAVKPVLVGGPKMRVAKAADAFVELADASGYGLA 285

Query:   268 IMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKK 327
             +MPS KG VPEHH HFIGTYWGAVS++FC EIVESADAY+F GPIFNDYSSVGYSLL+KK
Sbjct:   286 VMPSAKGQVPEHHKHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKK 345

Query:   328 EKAIIVQPHRVTVGNGPSLGWVFMADFLSALAKKLRKNTTALENYRRIYVPPGIPVKRAQ 387
             EKAIIVQP RVT+GNGP+ G V M DFLS LAK+++ N T+ ENY RIYVP G P++   
Sbjct:   346 EKAIIVQPDRVTIGNGPAFGCVLMKDFLSELAKRIKHNNTSYENYHRIYVPEGKPLRDNP 405

Query:   388 NEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGA 447
             NE LRVNVLF+HIQ+MLS ++AV+AETGDSWFNCQKL+LPE CGYEFQMQYGSIGWSVGA
Sbjct:   406 NESLRVNVLFQHIQNMLSSESAVLAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGA 465

Query:   448 TLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPY 507
             TLGYAQA  ++RVIACIGDGSFQVTAQ++STMIRCGQ++IIFLINNGGYTIEVEIHDGPY
Sbjct:   466 TLGYAQAMPNRRVIACIGDGSFQVTAQDVSTMIRCGQKTIIFLINNGGYTIEVEIHDGPY 525

Query:   508 NVIKNWDYTGLVNAIHNGEGKCWTAKV 534
             NVIKNW+YT  V AIHNGEGKCWTAKV
Sbjct:   526 NVIKNWNYTAFVEAIHNGEGKCWTAKV 552
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0003824 "catalytic activity" evidence=IEA
GO:0004737 "pyruvate decarboxylase activity" evidence=ISS
GO:0016831 "carboxy-lyase activity" evidence=IEA
GO:0030976 "thiamine pyrophosphate binding" evidence=IEA
GO:0001666 "response to hypoxia" evidence=IEP
GO:0005829 "cytosol" evidence=IDA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0007010 "cytoskeleton organization" evidence=RCA
GO:0010498 "proteasomal protein catabolic process" evidence=RCA
TAIR|locus:2179132 AT5G01320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2123827 AT4G33070 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179147 PDC3 "pyruvate decarboxylase-3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPAC1F8.07c SPAC1F8.07c "pyruvate decarboxylase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
POMBASE|SPAC186.09 SPAC186.09 "pyruvate decarboxylase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
SGD|S000004124 PDC5 "Minor isoform of pyruvate decarboxylase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
TIGR_CMR|BA_2486 BA_2486 "indolepyruvate decarboxylase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|O53865 kdc "Alpha-keto-acid decarboxylase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
SGD|S000003319 PDC6 "Minor isoform of pyruvate decarboxylase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q92345PDC2_SCHPO4, ., 1, ., 1, ., 10.43260.91000.8717yesno
Q9CBD6KDC_MYCLE4, ., 1, ., 1, ., -0.35010.87520.8383yesno
A0QBE6KDC_MYCA14, ., 1, ., 1, ., -0.34750.86230.8348yesno
P06672PDC_ZYMMO4, ., 1, ., 1, ., 10.44040.90450.8679yesno
P87208PDC_EMENI4, ., 1, ., 1, ., 10.35970.91000.8732yesno
Q0D3D2PDC3_ORYSJ4, ., 1, ., 1, ., 10.76360.96690.8977nono
Q6FJA3PDC1_CANGA4, ., 1, ., 1, ., 10.36050.88990.8599yesno
P51845PDC1_TOBAC4, ., 1, ., 1, ., 10.82050.76691.0N/Ano
P51846PDC2_TOBAC4, ., 1, ., 1, ., 10.750.97790.8680N/Ano
A0PL16KDC_MYCUA4, ., 1, ., 1, ., -0.35070.89900.8657yesno
O53865KDC_MYCTU4, ., 1, ., 1, ., -0.36650.89350.8696yesno
Q7U140KDC_MYCBO4, ., 1, ., 1, ., -0.36650.89350.8696yesno
Q10MW3PDC2_ORYSJ4, ., 1, ., 1, ., 10.82040.94670.8528yesno
A2XFI3PDC2_ORYSI4, ., 1, ., 1, ., 10.82040.94670.8514N/Ano
A1KGY5KDC_MYCBP4, ., 1, ., 1, ., -0.36650.89350.8696yesno
Q0DHF6PDC1_ORYSJ4, ., 1, ., 1, ., 10.80430.93760.8446nono
A0R480KDC_MYCS24, ., 1, ., 1, ., -0.33850.86970.8540yesno
P16467PDC5_YEAST4, ., 1, ., 1, ., 10.36030.88440.8561yesno
A2Y5L9PDC1_ORYSI4, ., 1, ., 1, ., 10.80620.93760.8446N/Ano
Q12629PDC1_KLULA4, ., 1, ., 1, ., 10.37100.88620.8579yesno
P23234DCIP_ENTCL4, ., 1, ., 1, ., 7, 40.33330.87880.8677yesno
P28516PDC1_MAIZE4, ., 1, ., 1, ., 10.82210.92840.8295N/Ano
P51851PDC2_PEA4, ., 1, ., 1, ., 10.80570.64220.8641N/Ano
P51850PDC1_PEA4, ., 1, ., 1, ., 10.87100.97790.8988N/Ano
A5U0P1KDC_MYCTA4, ., 1, ., 1, ., -0.36650.89350.8696yesno
A2YQ76PDC3_ORYSI4, ., 1, ., 1, ., 10.76540.96690.8977N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer4.1.1.10.979
3rd Layer4.1.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query545
PLN02573578 PLN02573, PLN02573, pyruvate decarboxylase 0.0
COG3961557 COG3961, COG3961, Pyruvate decarboxylase and relat 0.0
TIGR03393539 TIGR03393, indolpyr_decarb, indolepyruvate decarbo 1e-104
cd07038162 cd07038, TPP_PYR_PDC_IPDC_like, Pyrimidine (PYR) b 2e-87
cd02005183 cd02005, TPP_PDC_IPDC, Thiamine pyrophosphate (TPP 8e-74
COG0028550 COG0028, IlvB, Thiamine pyrophosphate-requiring en 2e-58
TIGR03394535 TIGR03394, indol_phenyl_DC, indolepyruvate/phenylp 2e-50
pfam02776172 pfam02776, TPP_enzyme_N, Thiamine pyrophosphate en 1e-36
cd06586154 cd06586, TPP_enzyme_PYR, Pyrimidine (PYR) binding 2e-28
cd07035155 cd07035, TPP_PYR_POX_like, Pyrimidine (PYR) bindin 7e-27
COG3962617 COG3962, COG3962, Acetolactate synthase [Amino aci 3e-22
TIGR00118558 TIGR00118, acolac_lg, acetolactate synthase, large 1e-21
PRK08611576 PRK08611, PRK08611, pyruvate oxidase; Provisional 1e-20
PRK08266542 PRK08266, PRK08266, hypothetical protein; Provisio 2e-20
pfam00205136 pfam00205, TPP_enzyme_M, Thiamine pyrophosphate en 2e-20
TIGR03457579 TIGR03457, sulphoacet_xsc, sulfoacetaldehyde acety 2e-20
PRK06112578 PRK06112, PRK06112, acetolactate synthase catalyti 6e-20
PRK06276586 PRK06276, PRK06276, acetolactate synthase catalyti 2e-18
PRK06456572 PRK06456, PRK06456, acetolactate synthase catalyti 4e-18
PRK07064544 PRK07064, PRK07064, hypothetical protein; Provisio 5e-17
PRK07282566 PRK07282, PRK07282, acetolactate synthase catalyti 2e-16
PRK06154565 PRK06154, PRK06154, hypothetical protein; Provisio 1e-15
PRK07092530 PRK07092, PRK07092, benzoylformate decarboxylase; 2e-15
cd00568168 cd00568, TPP_enzymes, Thiamine pyrophosphate (TPP) 2e-15
PRK06048561 PRK06048, PRK06048, acetolactate synthase 3 cataly 5e-15
cd07039164 cd07039, TPP_PYR_POX, Pyrimidine (PYR) binding dom 6e-14
PRK06457549 PRK06457, PRK06457, pyruvate dehydrogenase; Provis 2e-13
PRK08155564 PRK08155, PRK08155, acetolactate synthase catalyti 1e-12
PRK07525588 PRK07525, PRK07525, sulfoacetaldehyde acetyltransf 2e-12
cd02002178 cd02002, TPP_BFDC, Thiamine pyrophosphate (TPP) fa 7e-12
PRK08327569 PRK08327, PRK08327, acetolactate synthase catalyti 8e-12
PRK08978548 PRK08978, PRK08978, acetolactate synthase 2 cataly 1e-11
PRK06466574 PRK06466, PRK06466, acetolactate synthase 3 cataly 1e-11
PRK06965587 PRK06965, PRK06965, acetolactate synthase 3 cataly 1e-11
PRK06725570 PRK06725, PRK06725, acetolactate synthase 3 cataly 7e-11
PRK08322547 PRK08322, PRK08322, acetolactate synthase; Reviewe 8e-11
pfam02775151 pfam02775, TPP_enzyme_C, Thiamine pyrophosphate en 9e-11
cd02004172 cd02004, TPP_BZL_OCoD_HPCL, Thiamine pyrophosphate 9e-11
PRK08199557 PRK08199, PRK08199, thiamine pyrophosphate protein 1e-10
PRK08979572 PRK08979, PRK08979, acetolactate synthase 3 cataly 1e-10
PRK09107595 PRK09107, PRK09107, acetolactate synthase 3 cataly 2e-10
PRK06882574 PRK06882, PRK06882, acetolactate synthase 3 cataly 2e-10
TIGR01504588 TIGR01504, glyox_carbo_lig, glyoxylate carboligase 3e-10
PRK05858542 PRK05858, PRK05858, hypothetical protein; Provisio 5e-10
COG3960592 COG3960, COG3960, Glyoxylate carboligase [General 6e-10
TIGR02720575 TIGR02720, pyruv_oxi_spxB, pyruvate oxidase 1e-09
PRK07524535 PRK07524, PRK07524, hypothetical protein; Provisio 1e-09
PRK07789612 PRK07789, PRK07789, acetolactate synthase 1 cataly 2e-09
CHL00099585 CHL00099, ilvB, acetohydroxyacid synthase large su 2e-09
TIGR02418539 TIGR02418, acolac_catab, acetolactate synthase, ca 5e-09
PRK08527563 PRK08527, PRK08527, acetolactate synthase 3 cataly 2e-08
PRK08273597 PRK08273, PRK08273, thiamine pyrophosphate protein 2e-08
cd02003205 cd02003, TPP_IolD, Thiamine pyrophosphate (TPP) fa 5e-08
PLN02470585 PLN02470, PLN02470, acetolactate synthase 1e-07
cd02015186 cd02015, TPP_AHAS, Thiamine pyrophosphate (TPP) fa 4e-07
PRK08199557 PRK08199, PRK08199, thiamine pyrophosphate protein 6e-07
cd02010177 cd02010, TPP_ALS, Thiamine pyrophosphate (TPP) fam 1e-06
PRK07418616 PRK07418, PRK07418, acetolactate synthase 3 cataly 2e-06
PRK07586514 PRK07586, PRK07586, hypothetical protein; Validate 3e-06
cd02014178 cd02014, TPP_POX, Thiamine pyrophosphate (TPP) fam 3e-06
TIGR03254554 TIGR03254, oxalate_oxc, oxalyl-CoA decarboxylase 3e-06
PRK07979574 PRK07979, PRK07979, acetolactate synthase 3 cataly 5e-06
PRK07524535 PRK07524, PRK07524, hypothetical protein; Provisio 6e-06
PRK08266542 PRK08266, PRK08266, hypothetical protein; Provisio 4e-05
PRK08617552 PRK08617, PRK08617, acetolactate synthase; Reviewe 6e-05
PRK08322547 PRK08322, PRK08322, acetolactate synthase; Reviewe 1e-04
CHL00099585 CHL00099, ilvB, acetohydroxyacid synthase large su 2e-04
PRK07789612 PRK07789, PRK07789, acetolactate synthase 1 cataly 3e-04
PRK11269591 PRK11269, PRK11269, glyoxylate carboligase; Provis 3e-04
cd02013196 cd02013, TPP_Xsc_like, Thiamine pyrophosphate (TPP 4e-04
PRK06163202 PRK06163, PRK06163, hypothetical protein; Provisio 5e-04
cd02006202 cd02006, TPP_Gcl, Thiamine pyrophosphate (TPP) fam 8e-04
PRK07789612 PRK07789, PRK07789, acetolactate synthase 1 cataly 0.001
PRK09259569 PRK09259, PRK09259, putative oxalyl-CoA decarboxyl 0.001
PRK07710571 PRK07710, PRK07710, acetolactate synthase catalyti 0.002
PRK07710571 PRK07710, PRK07710, acetolactate synthase catalyti 0.002
PRK09107595 PRK09107, PRK09107, acetolactate synthase 3 cataly 0.003
PRK07979574 PRK07979, PRK07979, acetolactate synthase 3 cataly 0.003
TIGR00173430 TIGR00173, menD, 2-succinyl-5-enolpyruvyl-6-hydrox 0.003
>gnl|CDD|215311 PLN02573, PLN02573, pyruvate decarboxylase Back     alignment and domain information 
 Score = 1155 bits (2990), Expect = 0.0
 Identities = 441/523 (84%), Positives = 478/523 (91%)

Query: 12  QPGSAPAPVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGC 71
           Q  +        +S  TLGRHLARRLVEIG  DVFSVPGDFNLTLLDHLIAEP LNL+GC
Sbjct: 1   QSSAPKPATPVSSSDATLGRHLARRLVEIGVTDVFSVPGDFNLTLLDHLIAEPGLNLIGC 60

Query: 72  CNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYG 131
           CNELNAGYAADGYAR+RGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYG
Sbjct: 61  CNELNAGYAADGYARARGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYG 120

Query: 132 TNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISIS 191
           TNRILHHTIGLPDF+QELRCFQ +TC QAV+NNL DAHELIDTAISTALKESKPVYIS+S
Sbjct: 121 TNRILHHTIGLPDFSQELRCFQTVTCYQAVINNLEDAHELIDTAISTALKESKPVYISVS 180

Query: 192 CNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKA 251
           CNL  IPHPTF+R+PVPFFL P++SN++ LEAAVEA A+FLNKAVKPVLVGGP +RVAKA
Sbjct: 181 CNLAAIPHPTFSREPVPFFLTPRLSNKMSLEAAVEAAAEFLNKAVKPVLVGGPKLRVAKA 240

Query: 252 QKAFIELADATGYPIAIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGP 311
            KAF+ELADA+GYP+A+MPS KGLVPEHHPHFIGTYWGAVS+ FC EIVESADAY+F GP
Sbjct: 241 CKAFVELADASGYPVAVMPSAKGLVPEHHPHFIGTYWGAVSTPFCAEIVESADAYLFAGP 300

Query: 312 IFNDYSSVGYSLLIKKEKAIIVQPHRVTVGNGPSLGWVFMADFLSALAKKLRKNTTALEN 371
           IFNDYSSVGYSLL+KKEKAIIVQP RVT+GNGP+ G V M DFL ALAK+++KNTTA EN
Sbjct: 301 IFNDYSSVGYSLLLKKEKAIIVQPDRVTIGNGPAFGCVLMKDFLEALAKRVKKNTTAYEN 360

Query: 372 YRRIYVPPGIPVKRAQNEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCG 431
           Y+RI+VP G P+K    EPLRVNVLFKHIQ MLSGDTAVIAETGDSWFNCQKL+LPE CG
Sbjct: 361 YKRIFVPEGEPLKSEPGEPLRVNVLFKHIQKMLSGDTAVIAETGDSWFNCQKLKLPEGCG 420

Query: 432 YEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLI 491
           YEFQMQYGSIGWSVGATLGYAQAA DKRVIACIGDGSFQVTAQ++STMIRCGQ+SIIFLI
Sbjct: 421 YEFQMQYGSIGWSVGATLGYAQAAPDKRVIACIGDGSFQVTAQDVSTMIRCGQKSIIFLI 480

Query: 492 NNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNGEGKCWTAKV 534
           NNGGYTIEVEIHDGPYNVIKNW+YTGLV+AIHNGEGKCWTAKV
Sbjct: 481 NNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTAKV 523

Length = 578
>gnl|CDD|226470 COG3961, COG3961, Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|132434 TIGR03393, indolpyr_decarb, indolepyruvate decarboxylase, Erwinia family Back     alignment and domain information
>gnl|CDD|132921 cd07038, TPP_PYR_PDC_IPDC_like, Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins Back     alignment and domain information
>gnl|CDD|238963 cd02005, TPP_PDC_IPDC, Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) Back     alignment and domain information
>gnl|CDD|223107 COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|132435 TIGR03394, indol_phenyl_DC, indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family Back     alignment and domain information
>gnl|CDD|217224 pfam02776, TPP_enzyme_N, Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Back     alignment and domain information
>gnl|CDD|132915 cd06586, TPP_enzyme_PYR, Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>gnl|CDD|132918 cd07035, TPP_PYR_POX_like, Pyrimidine (PYR) binding domain of POX and related proteins Back     alignment and domain information
>gnl|CDD|226471 COG3962, COG3962, Acetolactate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|232833 TIGR00118, acolac_lg, acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>gnl|CDD|181502 PRK08611, PRK08611, pyruvate oxidase; Provisional Back     alignment and domain information
>gnl|CDD|181337 PRK08266, PRK08266, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|215786 pfam00205, TPP_enzyme_M, Thiamine pyrophosphate enzyme, central domain Back     alignment and domain information
>gnl|CDD|132497 TIGR03457, sulphoacet_xsc, sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>gnl|CDD|235700 PRK06112, PRK06112, acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|235766 PRK06276, PRK06276, acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>gnl|CDD|180569 PRK06456, PRK06456, acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>gnl|CDD|180820 PRK07064, PRK07064, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|180919 PRK07282, PRK07282, acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>gnl|CDD|235718 PRK06154, PRK06154, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|235931 PRK07092, PRK07092, benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>gnl|CDD|238318 cd00568, TPP_enzymes, Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor Back     alignment and domain information
>gnl|CDD|180368 PRK06048, PRK06048, acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>gnl|CDD|132922 cd07039, TPP_PYR_POX, Pyrimidine (PYR) binding domain of POX Back     alignment and domain information
>gnl|CDD|180570 PRK06457, PRK06457, pyruvate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|181257 PRK08155, PRK08155, acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|236042 PRK07525, PRK07525, sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>gnl|CDD|238960 cd02002, TPP_BFDC, Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC) Back     alignment and domain information
>gnl|CDD|236243 PRK08327, PRK08327, acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|181601 PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>gnl|CDD|180578 PRK06466, PRK06466, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|180780 PRK06965, PRK06965, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|180672 PRK06725, PRK06725, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|236239 PRK08322, PRK08322, acetolactate synthase; Reviewed Back     alignment and domain information
>gnl|CDD|217223 pfam02775, TPP_enzyme_C, Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Back     alignment and domain information
>gnl|CDD|238962 cd02004, TPP_BZL_OCoD_HPCL, Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL) Back     alignment and domain information
>gnl|CDD|181285 PRK08199, PRK08199, thiamine pyrophosphate protein; Validated Back     alignment and domain information
>gnl|CDD|181602 PRK08979, PRK08979, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|236380 PRK09107, PRK09107, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|168717 PRK06882, PRK06882, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|213633 TIGR01504, glyox_carbo_lig, glyoxylate carboligase Back     alignment and domain information
>gnl|CDD|235629 PRK05858, PRK05858, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|226469 COG3960, COG3960, Glyoxylate carboligase [General function prediction only] Back     alignment and domain information
>gnl|CDD|213733 TIGR02720, pyruv_oxi_spxB, pyruvate oxidase Back     alignment and domain information
>gnl|CDD|236041 PRK07524, PRK07524, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|236098 PRK07789, PRK07789, acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|214363 CHL00099, ilvB, acetohydroxyacid synthase large subunit Back     alignment and domain information
>gnl|CDD|131471 TIGR02418, acolac_catab, acetolactate synthase, catabolic Back     alignment and domain information
>gnl|CDD|181458 PRK08527, PRK08527, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|181344 PRK08273, PRK08273, thiamine pyrophosphate protein; Provisional Back     alignment and domain information
>gnl|CDD|238961 cd02003, TPP_IolD, Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv Back     alignment and domain information
>gnl|CDD|215261 PLN02470, PLN02470, acetolactate synthase Back     alignment and domain information
>gnl|CDD|238973 cd02015, TPP_AHAS, Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS Back     alignment and domain information
>gnl|CDD|181285 PRK08199, PRK08199, thiamine pyrophosphate protein; Validated Back     alignment and domain information
>gnl|CDD|238968 cd02010, TPP_ALS, Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation Back     alignment and domain information
>gnl|CDD|236014 PRK07418, PRK07418, acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>gnl|CDD|236063 PRK07586, PRK07586, hypothetical protein; Validated Back     alignment and domain information
>gnl|CDD|238972 cd02014, TPP_POX, Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions Back     alignment and domain information
>gnl|CDD|132298 TIGR03254, oxalate_oxc, oxalyl-CoA decarboxylase Back     alignment and domain information
>gnl|CDD|181185 PRK07979, PRK07979, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|236041 PRK07524, PRK07524, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|181337 PRK08266, PRK08266, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|236312 PRK08617, PRK08617, acetolactate synthase; Reviewed Back     alignment and domain information
>gnl|CDD|236239 PRK08322, PRK08322, acetolactate synthase; Reviewed Back     alignment and domain information
>gnl|CDD|214363 CHL00099, ilvB, acetohydroxyacid synthase large subunit Back     alignment and domain information
>gnl|CDD|236098 PRK07789, PRK07789, acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|183066 PRK11269, PRK11269, glyoxylate carboligase; Provisional Back     alignment and domain information
>gnl|CDD|238971 cd02013, TPP_Xsc_like, Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc) Back     alignment and domain information
>gnl|CDD|235721 PRK06163, PRK06163, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|238964 cd02006, TPP_Gcl, Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl) Back     alignment and domain information
>gnl|CDD|236098 PRK07789, PRK07789, acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|236433 PRK09259, PRK09259, putative oxalyl-CoA decarboxylase; Validated Back     alignment and domain information
>gnl|CDD|236076 PRK07710, PRK07710, acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>gnl|CDD|236076 PRK07710, PRK07710, acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>gnl|CDD|236380 PRK09107, PRK09107, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|181185 PRK07979, PRK07979, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|232855 TIGR00173, menD, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 545
COG0028550 IlvB Thiamine pyrophosphate-requiring enzymes [ace 100.0
PLN02573578 pyruvate decarboxylase 100.0
PRK08979572 acetolactate synthase 3 catalytic subunit; Validat 100.0
TIGR01504588 glyox_carbo_lig glyoxylate carboligase. Glyoxylate 100.0
PRK07979574 acetolactate synthase 3 catalytic subunit; Validat 100.0
PRK06965587 acetolactate synthase 3 catalytic subunit; Validat 100.0
PRK09107595 acetolactate synthase 3 catalytic subunit; Validat 100.0
PRK07418616 acetolactate synthase 3 catalytic subunit; Reviewe 100.0
PRK06466574 acetolactate synthase 3 catalytic subunit; Validat 100.0
PRK07789612 acetolactate synthase 1 catalytic subunit; Validat 100.0
PRK07282566 acetolactate synthase catalytic subunit; Reviewed 100.0
PRK11269591 glyoxylate carboligase; Provisional 100.0
PRK06725570 acetolactate synthase 3 catalytic subunit; Validat 100.0
TIGR03393539 indolpyr_decarb indolepyruvate decarboxylase, Erwi 100.0
PRK08978548 acetolactate synthase 2 catalytic subunit; Reviewe 100.0
PRK06048561 acetolactate synthase 3 catalytic subunit; Reviewe 100.0
TIGR03457579 sulphoacet_xsc sulfoacetaldehyde acetyltransferase 100.0
PRK08527563 acetolactate synthase 3 catalytic subunit; Validat 100.0
PRK06456572 acetolactate synthase catalytic subunit; Reviewed 100.0
TIGR03394535 indol_phenyl_DC indolepyruvate/phenylpyruvate deca 100.0
PLN02470585 acetolactate synthase 100.0
PRK08322547 acetolactate synthase; Reviewed 100.0
CHL00099585 ilvB acetohydroxyacid synthase large subunit 100.0
PRK07710571 acetolactate synthase catalytic subunit; Reviewed 100.0
PRK08273597 thiamine pyrophosphate protein; Provisional 100.0
PRK08155564 acetolactate synthase catalytic subunit; Validated 100.0
PRK08617552 acetolactate synthase; Reviewed 100.0
PRK08611576 pyruvate oxidase; Provisional 100.0
PRK06882574 acetolactate synthase 3 catalytic subunit; Validat 100.0
TIGR02418539 acolac_catab acetolactate synthase, catabolic. Ace 100.0
PRK09124574 pyruvate dehydrogenase; Provisional 100.0
TIGR00118558 acolac_lg acetolactate synthase, large subunit, bi 100.0
PRK08199557 thiamine pyrophosphate protein; Validated 100.0
PRK06154565 hypothetical protein; Provisional 100.0
PRK06276586 acetolactate synthase catalytic subunit; Reviewed 100.0
PRK06546578 pyruvate dehydrogenase; Provisional 100.0
PRK05858542 hypothetical protein; Provisional 100.0
PRK07525588 sulfoacetaldehyde acetyltransferase; Validated 100.0
PRK06457549 pyruvate dehydrogenase; Provisional 100.0
TIGR02720575 pyruv_oxi_spxB pyruvate oxidase. Members of this f 100.0
PRK07524535 hypothetical protein; Provisional 100.0
PRK07064544 hypothetical protein; Provisional 100.0
TIGR03254554 oxalate_oxc oxalyl-CoA decarboxylase. In a number 100.0
COG3961557 Pyruvate decarboxylase and related thiamine pyroph 100.0
PRK08266542 hypothetical protein; Provisional 100.0
PRK09259569 putative oxalyl-CoA decarboxylase; Validated 100.0
PRK06112578 acetolactate synthase catalytic subunit; Validated 100.0
PRK08327569 acetolactate synthase catalytic subunit; Validated 100.0
PRK07586514 hypothetical protein; Validated 100.0
PRK12474518 hypothetical protein; Provisional 100.0
PRK07092530 benzoylformate decarboxylase; Reviewed 100.0
KOG1185571 consensus Thiamine pyrophosphate-requiring enzyme 100.0
KOG1184561 consensus Thiamine pyrophosphate-requiring enzyme 100.0
KOG4166675 consensus Thiamine pyrophosphate-requiring enzyme 100.0
PRK07449568 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 100.0
PLN02980 1655 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi 100.0
TIGR00173432 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohex 100.0
COG3960592 Glyoxylate carboligase [General function predictio 100.0
COG3962617 Acetolactate synthase [Amino acid transport and me 100.0
COG1165566 MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-car 100.0
cd07039164 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX 100.0
cd07038162 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding dom 100.0
cd07037162 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2- 100.0
PF02776172 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-ter 100.0
TIGR03336595 IOR_alpha indolepyruvate ferredoxin oxidoreductase 100.0
TIGR03297361 Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi 100.0
cd07035155 TPP_PYR_POX_like Pyrimidine (PYR) binding domain o 100.0
cd02006202 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s 99.97
cd02013196 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, 99.97
cd07034160 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) bindi 99.97
cd02010177 TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto 99.96
cd02015186 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet 99.96
cd06586154 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of 99.96
cd02005183 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, 99.96
cd02003205 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD 99.96
cd02009175 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa 99.96
cd02014178 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv 99.95
cd02004172 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam 99.95
PRK06163202 hypothetical protein; Provisional 99.94
cd02002178 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC 99.94
TIGR03845157 sulfopyru_alph sulfopyruvate decarboxylase, alpha 99.94
cd02001157 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil 99.93
cd02008178 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, 99.93
PF02775153 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter 99.92
TIGR03846181 sulfopy_beta sulfopyruvate decarboxylase, beta sub 99.92
cd03371188 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, Pp 99.92
PF00205137 TPP_enzyme_M: Thiamine pyrophosphate enzyme, centr 99.92
cd03372179 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE 99.9
cd03376235 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam 99.9
cd03375193 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o 99.9
cd00568168 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa 99.9
cd02018237 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru 99.9
PRK09628277 oorB 2-oxoglutarate-acceptor oxidoreductase subuni 99.87
PRK11867286 2-oxoglutarate ferredoxin oxidoreductase subunit b 99.86
PRK05778 301 2-oxoglutarate ferredoxin oxidoreductase subunit b 99.86
PRK11869 280 2-oxoacid ferredoxin oxidoreductase subunit beta; 99.84
PRK11866 279 2-oxoacid ferredoxin oxidoreductase subunit beta; 99.83
TIGR02177 287 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta 99.81
COG4231640 Indolepyruvate ferredoxin oxidoreductase, alpha an 99.77
PRK13030 1159 2-oxoacid ferredoxin oxidoreductase; Provisional 99.77
PRK09193 1165 indolepyruvate ferredoxin oxidoreductase; Validate 99.73
PRK13029 1186 2-oxoacid ferredoxin oxidoreductase; Provisional 99.65
PRK00945171 acetyl-CoA decarbonylase/synthase complex subunit 99.48
TIGR00315162 cdhB CO dehydrogenase/acetyl-CoA synthase complex, 99.47
cd02012255 TPP_TK Thiamine pyrophosphate (TPP) family, Transk 99.46
TIGR03181 341 PDH_E1_alph_x pyruvate dehydrogenase E1 component, 99.42
cd02000293 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) 99.37
TIGR03182315 PDH_E1_alph_y pyruvate dehydrogenase E1 component, 99.33
CHL00149 341 odpA pyruvate dehydrogenase E1 component alpha sub 99.26
PRK05899 624 transketolase; Reviewed 99.23
PRK11865 299 pyruvate ferredoxin oxidoreductase subunit beta; P 99.06
PLN02374 433 pyruvate dehydrogenase (acetyl-transferring) 99.02
PRK11864 300 2-ketoisovalerate ferredoxin oxidoreductase subuni 98.98
COG4032172 Predicted thiamine-pyrophosphate-binding protein [ 98.97
PRK08659376 2-oxoglutarate ferredoxin oxidoreductase subunit a 98.96
PRK09627375 oorA 2-oxoglutarate-acceptor oxidoreductase subuni 98.93
cd02007195 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS s 98.91
PRK07119352 2-ketoisovalerate ferredoxin reductase; Validated 98.91
TIGR03710562 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha s 98.85
PRK05444 580 1-deoxy-D-xylulose-5-phosphate synthase; Provision 98.82
PRK09622407 porA pyruvate flavodoxin oxidoreductase subunit al 98.79
PRK08366390 vorA 2-ketoisovalerate ferredoxin oxidoreductase s 98.76
PRK08367394 porA pyruvate ferredoxin oxidoreductase subunit al 98.72
PF01855230 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreducta 98.7
COG1013 294 PorB Pyruvate:ferredoxin oxidoreductase and relate 98.5
PRK12571 641 1-deoxy-D-xylulose-5-phosphate synthase; Provision 98.27
COG0674365 PorA Pyruvate:ferredoxin oxidoreductase and relate 98.26
COG1880170 CdhB CO dehydrogenase/acetyl-CoA synthase epsilon 98.24
PLN02790 654 transketolase 97.95
cd02011227 TPP_PK Thiamine pyrophosphate (TPP) family, Phosph 97.93
PRK12754 663 transketolase; Reviewed 97.91
TIGR00232 653 tktlase_bact transketolase, bacterial and yeast. T 97.9
PTZ00089 661 transketolase; Provisional 97.89
PRK12315 581 1-deoxy-D-xylulose-5-phosphate synthase; Provision 97.85
PRK12753 663 transketolase; Reviewed 97.85
TIGR02176 1165 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid 97.77
PF00676300 E1_dh: Dehydrogenase E1 component; InterPro: IPR00 97.68
COG1071 358 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex 97.48
cd02017 386 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) fam 97.47
PF00456 332 Transketolase_N: Transketolase, thiamine diphospha 97.45
PF02552167 CO_dh: CO dehydrogenase beta subunit/acetyl-CoA sy 97.39
cd02016265 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) fami 97.29
COG3959243 Transketolase, N-terminal subunit [Carbohydrate tr 97.27
PF13292270 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate syn 97.25
PLN02269 362 Pyruvate dehydrogenase E1 component subunit alpha 97.23
cd03377 365 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), 97.12
TIGR00204 617 dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s 97.07
TIGR03186 889 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase. S 97.01
PLN02234 641 1-deoxy-D-xylulose-5-phosphate synthase 96.93
PRK05261 785 putative phosphoketolase; Provisional 96.92
KOG0523 632 consensus Transketolase [Carbohydrate transport an 96.86
PLN02582 677 1-deoxy-D-xylulose-5-phosphate synthase 96.6
TIGR00759 885 aceE pyruvate dehydrogenase E1 component, homodime 96.46
PRK09404 924 sucA 2-oxoglutarate dehydrogenase E1 component; Re 96.26
PRK13012 896 2-oxoacid dehydrogenase subunit E1; Provisional 96.05
COG1154 627 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme m 95.96
cd07033156 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai 95.93
PLN02225 701 1-deoxy-D-xylulose-5-phosphate synthase 95.88
KOG0225 394 consensus Pyruvate dehydrogenase E1, alpha subunit 95.88
PRK09405 891 aceE pyruvate dehydrogenase subunit E1; Reviewed 95.79
COG0021 663 TktA Transketolase [Carbohydrate transport and met 95.76
COG1029429 FwdB Formylmethanofuran dehydrogenase subunit B [E 95.75
TIGR00239 929 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 compon 95.54
cd02013196 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, 95.07
TIGR02176 1165 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid 94.81
PTZ00182355 3-methyl-2-oxobutanate dehydrogenase; Provisional 94.63
PF02775153 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter 94.61
cd02006202 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s 94.54
cd02004172 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam 94.46
smart00861168 Transket_pyr Transketolase, pyrimidine binding dom 94.04
cd02005183 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, 93.94
cd07036167 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding 93.19
PRK11866279 2-oxoacid ferredoxin oxidoreductase subunit beta; 93.15
cd02761415 MopB_FmdB-FwdB The MopB_FmdB-FwdB CD contains the 92.91
cd02008178 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, 92.84
TIGR00232653 tktlase_bact transketolase, bacterial and yeast. T 92.79
cd02003205 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD 92.78
cd02010177 TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto 92.68
cd02015186 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet 92.54
cd02009175 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa 92.43
cd03375193 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o 92.4
cd02001157 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil 92.27
TIGR03181341 PDH_E1_alph_x pyruvate dehydrogenase E1 component, 92.17
PRK11916312 electron transfer flavoprotein subunit YdiR; Provi 91.96
PLN00022356 electron transfer flavoprotein subunit alpha; Prov 91.62
PRK12754663 transketolase; Reviewed 91.52
PF09364 379 XFP_N: XFP N-terminal domain; InterPro: IPR018970 91.42
PTZ00089661 transketolase; Provisional 90.99
PRK03363313 fixB putative electron transfer flavoprotein FixB; 90.94
PLN02790654 transketolase 90.94
PRK05778301 2-oxoglutarate ferredoxin oxidoreductase subunit b 90.94
PRK11892464 pyruvate dehydrogenase subunit beta; Provisional 90.88
cd00568168 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa 90.71
PRK09212327 pyruvate dehydrogenase subunit beta; Validated 90.67
cd02014178 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv 90.39
CHL00144327 odpB pyruvate dehydrogenase E1 component beta subu 90.1
PRK12753663 transketolase; Reviewed 89.91
TIGR01504588 glyox_carbo_lig glyoxylate carboligase. Glyoxylate 89.68
PRK13012896 2-oxoacid dehydrogenase subunit E1; Provisional 89.49
PRK05261785 putative phosphoketolase; Provisional 89.46
cd02002178 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC 89.13
PRK06163202 hypothetical protein; Provisional 88.82
cd02000293 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) 88.47
PRK09444462 pntB pyridine nucleotide transhydrogenase; Provisi 88.47
TIGR03182315 PDH_E1_alph_y pyruvate dehydrogenase E1 component, 88.32
PRK09628277 oorB 2-oxoglutarate-acceptor oxidoreductase subuni 88.24
PRK12571641 1-deoxy-D-xylulose-5-phosphate synthase; Provision 88.24
PF00676300 E1_dh: Dehydrogenase E1 component; InterPro: IPR00 88.15
COG2025313 FixB Electron transfer flavoprotein, alpha subunit 87.85
PRK07525588 sulfoacetaldehyde acetyltransferase; Validated 87.56
PF02779178 Transket_pyr: Transketolase, pyrimidine binding do 87.34
PRK11269591 glyoxylate carboligase; Provisional 87.31
TIGR03846181 sulfopy_beta sulfopyruvate decarboxylase, beta sub 87.21
PRK14138244 NAD-dependent deacetylase; Provisional 87.06
PRK07979574 acetolactate synthase 3 catalytic subunit; Validat 86.95
PRK06546578 pyruvate dehydrogenase; Provisional 86.95
CHL00099585 ilvB acetohydroxyacid synthase large subunit 86.88
TIGR03394535 indol_phenyl_DC indolepyruvate/phenylpyruvate deca 86.84
cd03376235 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam 86.7
cd03371188 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, Pp 86.62
PRK09107595 acetolactate synthase 3 catalytic subunit; Validat 86.6
TIGR03457579 sulphoacet_xsc sulfoacetaldehyde acetyltransferase 86.59
TIGR00204617 dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s 86.53
cd02018237 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru 86.53
TIGR03297361 Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi 86.36
cd03372179 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE 86.32
CHL00149341 odpA pyruvate dehydrogenase E1 component alpha sub 86.15
PRK09124574 pyruvate dehydrogenase; Provisional 85.96
PRK08611576 pyruvate oxidase; Provisional 85.46
COG0028550 IlvB Thiamine pyrophosphate-requiring enzymes [ace 85.37
PRK08327569 acetolactate synthase catalytic subunit; Validated 85.35
COG1282463 PntB NAD/NADP transhydrogenase beta subunit [Energ 85.31
PRK00481242 NAD-dependent deacetylase; Provisional 85.22
PF02233463 PNTB: NAD(P) transhydrogenase beta subunit; InterP 85.13
PRK06882574 acetolactate synthase 3 catalytic subunit; Validat 85.12
PRK12315581 1-deoxy-D-xylulose-5-phosphate synthase; Provision 85.04
PRK06154565 hypothetical protein; Provisional 85.03
PRK08527563 acetolactate synthase 3 catalytic subunit; Validat 84.88
PRK05858542 hypothetical protein; Provisional 84.85
PRK11869280 2-oxoacid ferredoxin oxidoreductase subunit beta; 84.71
PLN02374433 pyruvate dehydrogenase (acetyl-transferring) 84.49
PRK05444580 1-deoxy-D-xylulose-5-phosphate synthase; Provision 84.42
TIGR03186889 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase. S 84.19
PLN02573578 pyruvate decarboxylase 84.18
PRK08617552 acetolactate synthase; Reviewed 84.18
TIGR03129421 one_C_dehyd_B formylmethanofuran dehydrogenase sub 83.93
TIGR02418539 acolac_catab acetolactate synthase, catabolic. Ace 83.92
PRK06466574 acetolactate synthase 3 catalytic subunit; Validat 83.84
PRK06725570 acetolactate synthase 3 catalytic subunit; Validat 83.81
TIGR03336595 IOR_alpha indolepyruvate ferredoxin oxidoreductase 83.75
PLN02470585 acetolactate synthase 83.46
PRK05899624 transketolase; Reviewed 83.35
PRK07586514 hypothetical protein; Validated 83.26
TIGR02720575 pyruv_oxi_spxB pyruvate oxidase. Members of this f 83.18
PRK08322547 acetolactate synthase; Reviewed 83.18
PRK07418616 acetolactate synthase 3 catalytic subunit; Reviewe 82.52
COG1071358 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex 82.42
PRK11867286 2-oxoglutarate ferredoxin oxidoreductase subunit b 82.37
COG3957 793 Phosphoketolase [Carbohydrate transport and metabo 82.32
PLN02582677 1-deoxy-D-xylulose-5-phosphate synthase 82.06
TIGR00118558 acolac_lg acetolactate synthase, large subunit, bi 81.94
PRK08978548 acetolactate synthase 2 catalytic subunit; Reviewe 81.91
PRK06456572 acetolactate synthase catalytic subunit; Reviewed 81.66
KOG1182 432 consensus Branched chain alpha-keto acid dehydroge 81.62
PRK07789612 acetolactate synthase 1 catalytic subunit; Validat 81.61
PRK06965587 acetolactate synthase 3 catalytic subunit; Validat 81.6
PRK08979572 acetolactate synthase 3 catalytic subunit; Validat 81.45
TIGR02177287 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta 81.26
PRK07524535 hypothetical protein; Provisional 80.95
PTZ00408242 NAD-dependent deacetylase; Provisional 80.78
PRK07710571 acetolactate synthase catalytic subunit; Reviewed 80.73
PRK07064544 hypothetical protein; Provisional 80.63
PRK07449568 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 80.5
cd01408235 SIRT1 SIRT1: Eukaryotic group (class1) which inclu 80.11
PRK08155564 acetolactate synthase catalytic subunit; Validated 80.08
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-99  Score=810.89  Aligned_cols=493  Identities=26%  Similarity=0.389  Sum_probs=415.3

Q ss_pred             CccHHHHHHHHHHHcCCCEEEecCCCChHHHHHhhhcCCCCeEEecCchhHHHHHHhHHhhhcC-ceEEEEcCCcchHHH
Q 009060           26 VGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRG-VGACVVTFTVGGLSV  104 (545)
Q Consensus        26 ~~~~a~~i~~~L~~~GV~~vFg~pG~~~~~l~~al~~~~~i~~i~~~hE~~A~~~A~gyar~tg-~gv~~~t~GpG~~n~  104 (545)
                      .||++|+|++.|+++||++|||+||+.+++++|+|.++ +|++|.+|||++|+|||+||+|+|| ||||++|+|||++|+
T Consensus         1 ~~~ga~~lv~~L~~~GV~~VFGiPG~~i~~~~dal~~~-~i~~I~~RHEq~Aa~mAdgyar~TGkpgV~~~tsGPGatN~   79 (550)
T COG0028           1 MMTGAEALVEALEANGVDTVFGIPGGSILPLYDALYDS-GIRHILVRHEQGAAFAADGYARATGKPGVCLVTSGPGATNL   79 (550)
T ss_pred             CCcHHHHHHHHHHHcCCcEEEeCCCccHHHHHHHHHhC-CCcEEEeccHHHHHHHHHHHHHHcCCCEEEEECCCCcHHHH
Confidence            48999999999999999999999999999999999986 9999999999999999999999999 999999999999999


Q ss_pred             HHHHHHhHhcCCcEEEEeCCCCCcccCCCcccccccCCCChHHHHHHhhhceeEEEEeCChhhHHHHHHHHHHHhhhC-C
Q 009060          105 LNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKE-S  183 (545)
Q Consensus       105 ~~~l~~A~~~~~Pllvi~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~k~~~~v~~~~~~~~~l~~A~~~a~~~-~  183 (545)
                      ++||++|+.|++|||+||||.++...+++     .+|+   .||..|+++++||++++.+++++++.+++||++|.++ |
T Consensus        80 ~tgla~A~~d~~Pll~itGqv~~~~~g~~-----afQe---~D~~~l~~p~tk~~~~v~~~~~ip~~i~~Af~~A~sgrp  151 (550)
T COG0028          80 LTGLADAYMDSVPLLAITGQVPTSLIGTD-----AFQE---VDQVGLFRPITKYNFEVRSPEDIPEVVARAFRIALSGRP  151 (550)
T ss_pred             HHHHHHHHhcCCCEEEEeCCccccccCcc-----hhhh---cchhhHhhhhheeEEEeCCHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999988887     3443   4899999999999999999999999999999999996 6


Q ss_pred             CcEEEEeCCCCCCCCCCCCCCCCCCcccCCCCCCchhhHHHHHHHHHHHHhcCCCEEEcCccccccchHHHHHHHHHHhC
Q 009060          184 KPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATG  263 (545)
Q Consensus       184 GPV~l~iP~dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~a~rpvi~~G~g~~~~~a~~~l~~lae~~~  263 (545)
                      |||||+||.|++.++.....+....  .....+..... +++++++++|.+||||+|++|+|+.++++.+++++|+|+++
T Consensus       152 Gpv~i~iP~Dv~~~~~~~~~~~~~~--~~~~~p~~~~~-~~i~~aa~~L~~AkrPvIl~G~G~~~a~a~~~l~~lae~~~  228 (550)
T COG0028         152 GPVVVDLPKDVLAAEAEEPGPEPAI--LPPYRPAPPPP-EAIRKAAELLAEAKRPVILAGGGVRRAGASEELRELAEKLG  228 (550)
T ss_pred             ceEEEEcChhHhhcccccccccccc--cccCCCCCCcH-HHHHHHHHHHHhCCCCEEEECCCccccccHHHHHHHHHHHC
Confidence            9999999999988532221111111  11111111122 78999999999999999999999999999999999999999


Q ss_pred             CceEeCCCCccCCCCCCCCccceecCCCCCHHHHHHhhcCCEEEEeCCCCCCCcccccccCCCCCcEEEEcCCcceecCC
Q 009060          264 YPIAIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVGNG  343 (545)
Q Consensus       264 ~Pv~tt~~~kg~~~~~hpl~~G~~~G~~~~~~~~~~l~~aD~vl~lG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~  343 (545)
                      +||++|++|||.+|++||+++|.. |..++..++.++++||+||++|++++++.+. +..+.++.++||||+|+.+++ +
T Consensus       229 ~Pv~~t~~gkg~~p~~hp~~lG~~-g~~g~~~a~~~~~~aDlll~vG~rf~~~~~~-~~~f~~~~~ii~iDidp~ei~-k  305 (550)
T COG0028         229 APVVTTLMGKGAVPEDHPLSLGML-GMHGTKAANEALEEADLLLAVGARFDDRVTG-YSGFAPPAAIIHIDIDPAEIG-K  305 (550)
T ss_pred             CCEEEccCcCccCCCCCccccccc-cccccHHHHHHhhcCCEEEEecCCCcccccc-hhhhCCcCCEEEEeCChHHhC-C
Confidence            999999999999999999999996 8888888999999999999999999999887 666655434999999999998 4


Q ss_pred             Ccccc----ccHHHHHHHHHHHhccC-chhhh---hhhhhcCCCCCCCcCCCCCCcCHHHHHHHHHhhCCCCCEEEecCC
Q 009060          344 PSLGW----VFMADFLSALAKKLRKN-TTALE---NYRRIYVPPGIPVKRAQNEPLRVNVLFKHIQDMLSGDTAVIAETG  415 (545)
Q Consensus       344 ~~~~~----~d~~~~l~~L~~~l~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ivv~d~G  415 (545)
                      ++..+    .|++.+|++|.+.++.. ..++.   ++++.+....  .........+|.++++.|++.+++|+|++.|+|
T Consensus       306 ~~~~~~~i~gD~~~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~v~~~l~~~~~~daiv~~d~G  383 (550)
T COG0028         306 NYPVDVPIVGDAKATLEALLEELKPERAAWLEELLEARAAYRDLA--LEELADDGIKPQYVIKVLRELLPDDAIVVTDVG  383 (550)
T ss_pred             CCCCCeeEeccHHHHHHHHHHhhhhcchHHHHHHHHHHHhhhhhh--hhccCCCccCHHHHHHHHHHhCCCCeEEEeCCc
Confidence            43333    38999999999998753 22221   1111111110  011112223899999999999999999999999


Q ss_pred             cccccc-ccccccCCCeeEeccCccccchhHHHHHHhhhhcCCCeEEEEEcchhhcccHHHHHHHHHhCCCeEEEEEeCC
Q 009060          416 DSWFNC-QKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNG  494 (545)
Q Consensus       416 ~~~~~~-~~~~~~~~~~~~~~~~~g~mG~~l~aAiGaala~p~r~vv~i~GDGsf~~~~~eL~ta~~~~lpi~ivV~NN~  494 (545)
                      ++..|. +++...++++++.+.++|+||||+|+|||||++.|+|+||+|+|||||+|++|||+|++||++|+++||+||+
T Consensus       384 ~~~~w~a~~~~~~~p~~~~~s~~~GtMG~glPaAIGAkla~P~r~Vv~i~GDG~F~m~~qEL~Ta~r~~lpv~ivv~nN~  463 (550)
T COG0028         384 QHQMWAARYFDFYRPRRFLTSGGLGTMGFGLPAAIGAKLAAPDRKVVAIAGDGGFMMNGQELETAVRYGLPVKIVVLNNG  463 (550)
T ss_pred             HHHHHHHHhcccCCCCcEEcCCCCccccchHHHHHHHHhhCCCCcEEEEEcccHHhccHHHHHHHHHhCCCEEEEEEECC
Confidence            998875 4556666778999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhh----hhhhcCCC--CCCCCCCCHHHHHHHcCCCCCceeEEEEeeceee
Q 009060          495 GYTI----EVEIHDGP--YNVIKNWDYTGLVNAIHNGEGKCWTAKVSIYKMC  540 (545)
Q Consensus       495 ~~g~----~~~~~~~~--~~~l~~~d~~~lA~a~G~~~~~~~~~~v~~~~~~  540 (545)
                      +||+    +..++...  ..++.+++|.++||+||++     +++|++.+|+
T Consensus       464 ~~g~v~~~q~~~~~~~~~~~~~~~~~f~klAea~G~~-----g~~v~~~~el  510 (550)
T COG0028         464 GYGMVRQWQELFYGGRYSGTDLGNPDFVKLAEAYGAK-----GIRVETPEEL  510 (550)
T ss_pred             ccccchHHHHHhcCCCcceeecCCccHHHHHHHcCCe-----eEEeCCHHHH
Confidence            9999    22233332  2456544499999999996     6788888776

>PLN02573 pyruvate decarboxylase Back     alignment and domain information
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR01504 glyox_carbo_lig glyoxylate carboligase Back     alignment and domain information
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>PRK07282 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK11269 glyoxylate carboligase; Provisional Back     alignment and domain information
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR03393 indolpyr_decarb indolepyruvate decarboxylase, Erwinia family Back     alignment and domain information
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06456 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family Back     alignment and domain information
>PLN02470 acetolactate synthase Back     alignment and domain information
>PRK08322 acetolactate synthase; Reviewed Back     alignment and domain information
>CHL00099 ilvB acetohydroxyacid synthase large subunit Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK08273 thiamine pyrophosphate protein; Provisional Back     alignment and domain information
>PRK08155 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK08617 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK08611 pyruvate oxidase; Provisional Back     alignment and domain information
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR02418 acolac_catab acetolactate synthase, catabolic Back     alignment and domain information
>PRK09124 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>PRK08199 thiamine pyrophosphate protein; Validated Back     alignment and domain information
>PRK06154 hypothetical protein; Provisional Back     alignment and domain information
>PRK06276 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK06546 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK05858 hypothetical protein; Provisional Back     alignment and domain information
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>PRK06457 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase Back     alignment and domain information
>PRK07524 hypothetical protein; Provisional Back     alignment and domain information
>PRK07064 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase Back     alignment and domain information
>COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only] Back     alignment and domain information
>PRK08266 hypothetical protein; Provisional Back     alignment and domain information
>PRK09259 putative oxalyl-CoA decarboxylase; Validated Back     alignment and domain information
>PRK06112 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK08327 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK07586 hypothetical protein; Validated Back     alignment and domain information
>PRK12474 hypothetical protein; Provisional Back     alignment and domain information
>PRK07092 benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>KOG1185 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>KOG1184 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>KOG4166 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated Back     alignment and domain information
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding Back     alignment and domain information
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase Back     alignment and domain information
>COG3960 Glyoxylate carboligase [General function prediction only] Back     alignment and domain information
>COG3962 Acetolactate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>COG1165 MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism] Back     alignment and domain information
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX Back     alignment and domain information
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins Back     alignment and domain information
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins Back     alignment and domain information
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit Back     alignment and domain information
>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase Back     alignment and domain information
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins Back     alignment and domain information
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl) Back     alignment and domain information
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc) Back     alignment and domain information
>cd07034 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins Back     alignment and domain information
>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation Back     alignment and domain information
>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS Back     alignment and domain information
>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>cd02005 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) Back     alignment and domain information
>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv Back     alignment and domain information
>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD) Back     alignment and domain information
>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions Back     alignment and domain information
>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL) Back     alignment and domain information
>PRK06163 hypothetical protein; Provisional Back     alignment and domain information
>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC) Back     alignment and domain information
>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit Back     alignment and domain information
>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase) Back     alignment and domain information
>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit Back     alignment and domain information
>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit Back     alignment and domain information
>cd03371 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, PpyrDC subfamily, TPP-binding module; composed of proteins similar to phosphonopyruvate decarboxylase (PpyrDC) proteins Back     alignment and domain information
>PF00205 TPP_enzyme_M: Thiamine pyrophosphate enzyme, central domain; InterPro: IPR012000 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE) Back     alignment and domain information
>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria Back     alignment and domain information
>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor Back     alignment and domain information
>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor Back     alignment and domain information
>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways Back     alignment and domain information
>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed Back     alignment and domain information
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed Back     alignment and domain information
>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated Back     alignment and domain information
>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family Back     alignment and domain information
>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion] Back     alignment and domain information
>PRK13030 2-oxoacid ferredoxin oxidoreductase; Provisional Back     alignment and domain information
>PRK09193 indolepyruvate ferredoxin oxidoreductase; Validated Back     alignment and domain information
>PRK13029 2-oxoacid ferredoxin oxidoreductase; Provisional Back     alignment and domain information
>PRK00945 acetyl-CoA decarbonylase/synthase complex subunit epsilon; Provisional Back     alignment and domain information
>TIGR00315 cdhB CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit Back     alignment and domain information
>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates Back     alignment and domain information
>TIGR03181 PDH_E1_alph_x pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC) Back     alignment and domain information
>TIGR03182 PDH_E1_alph_y pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>CHL00149 odpA pyruvate dehydrogenase E1 component alpha subunit; Reviewed Back     alignment and domain information
>PRK05899 transketolase; Reviewed Back     alignment and domain information
>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PLN02374 pyruvate dehydrogenase (acetyl-transferring) Back     alignment and domain information
>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>COG4032 Predicted thiamine-pyrophosphate-binding protein [General function prediction only] Back     alignment and domain information
>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated Back     alignment and domain information
>PRK09627 oorA 2-oxoglutarate-acceptor oxidoreductase subunit OorA; Reviewed Back     alignment and domain information
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis Back     alignment and domain information
>PRK07119 2-ketoisovalerate ferredoxin reductase; Validated Back     alignment and domain information
>TIGR03710 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha subunit Back     alignment and domain information
>PRK05444 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PRK09622 porA pyruvate flavodoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>PRK08366 vorA 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>PRK08367 porA pyruvate ferredoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>PF01855 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; InterPro: IPR002880 This family includes the N-terminal region of the pyruvate ferredoxin oxidoreductase, corresponding to the first two structural domains Back     alignment and domain information
>COG1013 PorB Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy production and conversion] Back     alignment and domain information
>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>COG0674 PorA Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [Energy production and conversion] Back     alignment and domain information
>COG1880 CdhB CO dehydrogenase/acetyl-CoA synthase epsilon subunit [Energy production and conversion] Back     alignment and domain information
>PLN02790 transketolase Back     alignment and domain information
>cd02011 TPP_PK Thiamine pyrophosphate (TPP) family, Phosphoketolase (PK) subfamily, TPP-binding module; PK catalyzes the conversion of D-xylulose 5-phosphate and phosphate to acetyl phosphate, D-glyceraldehyde-3-phosphate and H2O Back     alignment and domain information
>PRK12754 transketolase; Reviewed Back     alignment and domain information
>TIGR00232 tktlase_bact transketolase, bacterial and yeast Back     alignment and domain information
>PTZ00089 transketolase; Provisional Back     alignment and domain information
>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PRK12753 transketolase; Reviewed Back     alignment and domain information
>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric Back     alignment and domain information
>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex Back     alignment and domain information
>COG1071 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] Back     alignment and domain information
>cd02017 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) family, E1 of E Back     alignment and domain information
>PF00456 Transketolase_N: Transketolase, thiamine diphosphate binding domain; InterPro: IPR005474 Transketolase 2 Back     alignment and domain information
>PF02552 CO_dh: CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit; InterPro: IPR003704 Carbon monoxide dehydrogenase (Cdh) from Methanosarcina mazei (Methanosarcina frisia) Go1 is a Ni2+-, Fe2+-, and S2-containing alpha2beta2 heterotetramer [] Back     alignment and domain information
>cd02016 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC) Back     alignment and domain information
>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13292 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate synthase; PDB: 2O1X_C 2O1S_B Back     alignment and domain information
>PLN02269 Pyruvate dehydrogenase E1 component subunit alpha Back     alignment and domain information
>cd03377 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), PFOR_PNO subfamily, TPP-binding module; composed of proteins similar to the single subunit pyruvate ferredoxin oxidoreductase (PFOR) of Desulfovibrio Africanus, present in bacteria and amitochondriate eukaryotes Back     alignment and domain information
>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>TIGR03186 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase Back     alignment and domain information
>PLN02234 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PRK05261 putative phosphoketolase; Provisional Back     alignment and domain information
>KOG0523 consensus Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02582 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>TIGR00759 aceE pyruvate dehydrogenase E1 component, homodimeric type Back     alignment and domain information
>PRK09404 sucA 2-oxoglutarate dehydrogenase E1 component; Reviewed Back     alignment and domain information
>PRK13012 2-oxoacid dehydrogenase subunit E1; Provisional Back     alignment and domain information
>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism] Back     alignment and domain information
>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins Back     alignment and domain information
>PLN02225 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>KOG0225 consensus Pyruvate dehydrogenase E1, alpha subunit [Energy production and conversion] Back     alignment and domain information
>PRK09405 aceE pyruvate dehydrogenase subunit E1; Reviewed Back     alignment and domain information
>COG0021 TktA Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG1029 FwdB Formylmethanofuran dehydrogenase subunit B [Energy production and conversion] Back     alignment and domain information
>TIGR00239 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 component Back     alignment and domain information
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc) Back     alignment and domain information
>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric Back     alignment and domain information
>PTZ00182 3-methyl-2-oxobutanate dehydrogenase; Provisional Back     alignment and domain information
>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl) Back     alignment and domain information
>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL) Back     alignment and domain information
>smart00861 Transket_pyr Transketolase, pyrimidine binding domain Back     alignment and domain information
>cd02005 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) Back     alignment and domain information
>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins Back     alignment and domain information
>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>cd02761 MopB_FmdB-FwdB The MopB_FmdB-FwdB CD contains the molybdenum/tungsten formylmethanofuran dehydrogenases, subunit B (FmdB/FwdB), and other related proteins Back     alignment and domain information
>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit Back     alignment and domain information
>TIGR00232 tktlase_bact transketolase, bacterial and yeast Back     alignment and domain information
>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv Back     alignment and domain information
>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation Back     alignment and domain information
>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS Back     alignment and domain information
>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD) Back     alignment and domain information
>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor Back     alignment and domain information
>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase) Back     alignment and domain information
>TIGR03181 PDH_E1_alph_x pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>PRK11916 electron transfer flavoprotein subunit YdiR; Provisional Back     alignment and domain information
>PLN00022 electron transfer flavoprotein subunit alpha; Provisional Back     alignment and domain information
>PRK12754 transketolase; Reviewed Back     alignment and domain information
>PF09364 XFP_N: XFP N-terminal domain; InterPro: IPR018970 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria Back     alignment and domain information
>PTZ00089 transketolase; Provisional Back     alignment and domain information
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional Back     alignment and domain information
>PLN02790 transketolase Back     alignment and domain information
>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated Back     alignment and domain information
>PRK11892 pyruvate dehydrogenase subunit beta; Provisional Back     alignment and domain information
>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor Back     alignment and domain information
>PRK09212 pyruvate dehydrogenase subunit beta; Validated Back     alignment and domain information
>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions Back     alignment and domain information
>CHL00144 odpB pyruvate dehydrogenase E1 component beta subunit; Validated Back     alignment and domain information
>PRK12753 transketolase; Reviewed Back     alignment and domain information
>TIGR01504 glyox_carbo_lig glyoxylate carboligase Back     alignment and domain information
>PRK13012 2-oxoacid dehydrogenase subunit E1; Provisional Back     alignment and domain information
>PRK05261 putative phosphoketolase; Provisional Back     alignment and domain information
>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC) Back     alignment and domain information
>PRK06163 hypothetical protein; Provisional Back     alignment and domain information
>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC) Back     alignment and domain information
>PRK09444 pntB pyridine nucleotide transhydrogenase; Provisional Back     alignment and domain information
>TIGR03182 PDH_E1_alph_y pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed Back     alignment and domain information
>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex Back     alignment and domain information
>COG2025 FixB Electron transfer flavoprotein, alpha subunit [Energy production and conversion] Back     alignment and domain information
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>PF02779 Transket_pyr: Transketolase, pyrimidine binding domain; InterPro: IPR005475 Transketolase 2 Back     alignment and domain information
>PRK11269 glyoxylate carboligase; Provisional Back     alignment and domain information
>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit Back     alignment and domain information
>PRK14138 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06546 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>CHL00099 ilvB acetohydroxyacid synthase large subunit Back     alignment and domain information
>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family Back     alignment and domain information
>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria Back     alignment and domain information
>cd03371 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, PpyrDC subfamily, TPP-binding module; composed of proteins similar to phosphonopyruvate decarboxylase (PpyrDC) proteins Back     alignment and domain information
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways Back     alignment and domain information
>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase Back     alignment and domain information
>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE) Back     alignment and domain information
>CHL00149 odpA pyruvate dehydrogenase E1 component alpha subunit; Reviewed Back     alignment and domain information
>PRK09124 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK08611 pyruvate oxidase; Provisional Back     alignment and domain information
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK08327 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>COG1282 PntB NAD/NADP transhydrogenase beta subunit [Energy production and conversion] Back     alignment and domain information
>PRK00481 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>PF02233 PNTB: NAD(P) transhydrogenase beta subunit; InterPro: IPR012136 NAD(P) transhydrogenase catalyses the transfer of reducing equivalents between NAD(H) and NADP(H), coupled to the translocation of protons across a membrane [] Back     alignment and domain information
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PRK06154 hypothetical protein; Provisional Back     alignment and domain information
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK05858 hypothetical protein; Provisional Back     alignment and domain information
>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PLN02374 pyruvate dehydrogenase (acetyl-transferring) Back     alignment and domain information
>PRK05444 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>TIGR03186 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase Back     alignment and domain information
>PLN02573 pyruvate decarboxylase Back     alignment and domain information
>PRK08617 acetolactate synthase; Reviewed Back     alignment and domain information
>TIGR03129 one_C_dehyd_B formylmethanofuran dehydrogenase subunit B Back     alignment and domain information
>TIGR02418 acolac_catab acetolactate synthase, catabolic Back     alignment and domain information
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit Back     alignment and domain information
>PLN02470 acetolactate synthase Back     alignment and domain information
>PRK05899 transketolase; Reviewed Back     alignment and domain information
>PRK07586 hypothetical protein; Validated Back     alignment and domain information
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase Back     alignment and domain information
>PRK08322 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>COG1071 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] Back     alignment and domain information
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed Back     alignment and domain information
>COG3957 Phosphoketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02582 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>PRK06456 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>KOG1182 consensus Branched chain alpha-keto acid dehydrogenase complex, alpha subunit [Energy production and conversion] Back     alignment and domain information
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family Back     alignment and domain information
>PRK07524 hypothetical protein; Provisional Back     alignment and domain information
>PTZ00408 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK07064 hypothetical protein; Provisional Back     alignment and domain information
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated Back     alignment and domain information
>cd01408 SIRT1 SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PRK08155 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query545
2vbi_A566 Holostructure Of Pyruvate Decarboxylase From Acetob 1e-118
2wva_A568 Structural Insights Into The Pre-Reaction State Of 1e-112
3oe1_A568 Pyruvate Decarboxylase Variant Glu473asp From Z. Mo 1e-112
1zpd_A568 Pyruvate Decarboxylase From Zymomonas Mobilis Lengt 1e-109
2vjy_A563 Pyruvate Decarboxylase From Kluyveromyces Lactis In 8e-78
1pyd_A556 Catalytic Centers In The Thiamin Diphosphate Depend 4e-74
1pvd_A555 Crystal Structure Of The Thiamin Diphosphate Depend 5e-74
2vk8_A563 Crystal Structure Of The Saccharomyces Cerevisiae P 7e-74
1qpb_A563 Pyruvate Decarboyxlase From Yeast (Form B) Complexe 1e-73
2w93_A563 Crystal Structure Of The Saccharomyces Cerevisiae P 1e-73
2vk1_A563 Crystal Structure Of The Saccharomyces Cerevisiae P 3e-73
2vbf_A570 The Holostructure Of The Branched-Chain Keto Acid D 2e-70
1ovm_A552 Crystal Structure Of Indolepyruvate Decarboxylase F 1e-68
2nxw_A565 Crystal Structure Of Phenylpyruvate Decarboxylase O 6e-35
3f6b_X525 Crystal Structure Of Benzoylformate Decarboxylase I 6e-14
2v3w_A528 Crystal Structure Of The Benzoylformate Decarboxyla 7e-14
1pi3_A528 E28q Mutant Benzoylformate Decarboxylase From Pseud 7e-14
3fzn_A534 Intermediate Analogue In Benzoylformate Decarboxyla 7e-14
1mcz_A528 Benzoylformate Decarboxylase From Pseudomonas Putid 7e-14
1yno_A527 High Resolution Structure Of Benzoylformate Decarbo 7e-14
3e9y_A584 Arabidopsis Thaliana Acetohydroxyacid Synthase In C 8e-14
2fwn_A528 Phosphorylation Of An Active Site Serine In A Thdp- 9e-14
1po7_A528 High Resolution Structure Of E28a Mutant Benzoylfor 1e-13
2fn3_A528 High Resolution Structure Of S26a Mutant Of Benzoyl 1e-13
1ybh_A590 Crystal Structure Of Arabidopsis Thaliana Acetohydr 1e-13
1jsc_A630 Crystal Structure Of The Catalytic Subunit Of Yeast 1e-09
1n0h_A677 Crystal Structure Of Yeast Acetohydroxyacid Synthas 1e-09
2pan_A616 Crystal Structure Of E. Coli Glyoxylate Carboligase 8e-09
2ez4_A603 Pyruvate Oxidase Variant F479w Length = 603 2e-07
1pow_A585 The Refined Structures Of A Stabilized Mutant And O 2e-07
4fee_A603 High-Resolution Structure Of Pyruvate Oxidase In Co 2e-07
2c31_A568 Crystal Structure Of Oxalyl-Coa Decarboxylase In Co 4e-07
1y9d_A603 Pyruvate Oxidase Variant V265a From Lactobacillus P 4e-07
1pox_A585 The Refined Structures Of A Stabilized Mutant And O 1e-06
2pgn_A589 The Crystal Structure Of Fad And Thdp-Dependent Cyc 2e-06
3lq1_A578 Crystal Structure Of 2-Succinyl-6-Hydroxy-2,4-Cyclo 7e-04
1upb_A573 Carboxyethylarginine Synthase From Streptomyces Cla 8e-04
>pdb|2VBI|A Chain A, Holostructure Of Pyruvate Decarboxylase From Acetobacter Pasteurianus Length = 566 Back     alignment and structure 
Iteration: 1

 Score =  423 bits (1087), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/500 (44%), Positives = 305/500 (61%), Gaps = 6/500 (1%)
Query: 28  TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARS 87
           T+G +LA RLV+IG K  F+V GD+NL LLD L+   ++  + CCNELN G++A+GYARS
Sbjct: 4   TVGMYLAERLVQIGLKHHFAVAGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARS 63
Query: 88  RGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQ 147
            G  A VVTF+VG +S +NA+ GAY+ENLPVI I G PNSND GT  ILHHTIG  D++ 
Sbjct: 64  NGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSY 123
Query: 148 ELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPV 207
           +L   + +TC+   + +   A   ID  I TAL+E KP Y+ I+CN+     P     PV
Sbjct: 124 QLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIAS--EPCVRPGPV 181
Query: 208 PFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIA 267
              L+    +   L+AAV+AT   L K+  PV++ G  +R A A  A   LAD     + 
Sbjct: 182 SSLLSEPEIDHTSLKAAVDATVALLEKSASPVMLLGSKLRAANALAATETLADKLQCAVT 241
Query: 268 IMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKK 327
           IM + KG  PE H  F G YWG VS+    E+VE++DA + + P+FNDYS+VG+S   K 
Sbjct: 242 IMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSAWPKG 301
Query: 328 EKAIIVQPHRVTVGNGPSLGWVFMADFLSALAKKLRKNTTALENYRRIYVPPGIPVKRAQ 387
              I+ +P RVTV      G+   A FL ALA+K      + +   +  VP       + 
Sbjct: 302 PNVILAEPDRVTVDGRAYDGFTLRA-FLQALAEKAPARPASAQ---KSSVPTCSLTATSD 357
Query: 388 NEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGA 447
              L  + + +HI  +L+ +T ++AETGDSWFN  ++ LP     E +MQ+G IGWSV +
Sbjct: 358 EAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQWGHIGWSVPS 417
Query: 448 TLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPY 507
             G A  ++D++ +  +GDGSFQ+TAQE++ M+R     IIFLINN GY IE+ IHDGPY
Sbjct: 418 AFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPY 477
Query: 508 NVIKNWDYTGLVNAIHNGEG 527
           N IKNWDY GL+   + GEG
Sbjct: 478 NYIKNWDYAGLMEVFNAGEG 497
>pdb|2WVA|A Chain A, Structural Insights Into The Pre-Reaction State Of Pyruvate Decarboxylase From Zymomonas Mobilis Length = 568 Back     alignment and structure
>pdb|3OE1|A Chain A, Pyruvate Decarboxylase Variant Glu473asp From Z. Mobilis In Complex With Reaction Intermediate 2-Lactyl-Thdp Length = 568 Back     alignment and structure
>pdb|1ZPD|A Chain A, Pyruvate Decarboxylase From Zymomonas Mobilis Length = 568 Back     alignment and structure
>pdb|2VJY|A Chain A, Pyruvate Decarboxylase From Kluyveromyces Lactis In Complex With The Substrate Analogue Methyl Acetylphosphonate Length = 563 Back     alignment and structure
>pdb|1PYD|A Chain A, Catalytic Centers In The Thiamin Diphosphate Dependent Enzyme Pyruvate Decarboxylase At 2.4 Angstroms Resolution Length = 556 Back     alignment and structure
>pdb|1PVD|A Chain A, Crystal Structure Of The Thiamin Diphosphate Dependent Enzyme Pyruvate Decarboxylase From The Yeast Saccharomyces Cerevisiae At 2.3 Angstroms Resolution Length = 555 Back     alignment and structure
>pdb|2VK8|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Pyruvate Decarboxylase Variant E477q In Complex With Its Substrate Length = 563 Back     alignment and structure
>pdb|1QPB|A Chain A, Pyruvate Decarboyxlase From Yeast (Form B) Complexed With Pyruvamide Length = 563 Back     alignment and structure
>pdb|2W93|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Pyruvate Decarboxylase Variant E477q In Complex With The Surrogate Pyruvamide Length = 563 Back     alignment and structure
>pdb|2VK1|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Pyruvate Decarboxylase Variant D28a In Complex With Its Substrate Length = 563 Back     alignment and structure
>pdb|2VBF|A Chain A, The Holostructure Of The Branched-Chain Keto Acid Decarboxylase (Kdca) From Lactococcus Lactis Length = 570 Back     alignment and structure
>pdb|1OVM|A Chain A, Crystal Structure Of Indolepyruvate Decarboxylase From Enterobacter Cloacae Length = 552 Back     alignment and structure
>pdb|2NXW|A Chain A, Crystal Structure Of Phenylpyruvate Decarboxylase Of Azospirillum Brasilense Length = 565 Back     alignment and structure
>pdb|3F6B|X Chain X, Crystal Structure Of Benzoylformate Decarboxylase In Complex With The Pyridyl Inhibitor Paa Length = 525 Back     alignment and structure
>pdb|2V3W|A Chain A, Crystal Structure Of The Benzoylformate Decarboxylase Variant L461a From Pseudomonas Putida Length = 528 Back     alignment and structure
>pdb|1PI3|A Chain A, E28q Mutant Benzoylformate Decarboxylase From Pseudomonas Putida Length = 528 Back     alignment and structure
>pdb|3FZN|A Chain A, Intermediate Analogue In Benzoylformate Decarboxylase Length = 534 Back     alignment and structure
>pdb|1MCZ|A Chain A, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate Length = 528 Back     alignment and structure
>pdb|1YNO|A Chain A, High Resolution Structure Of Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With Thiamine Thiazolone Diphosphate Length = 527 Back     alignment and structure
>pdb|3E9Y|A Chain A, Arabidopsis Thaliana Acetohydroxyacid Synthase In Complex With Monosulfuron Length = 584 Back     alignment and structure
>pdb|2FWN|A Chain A, Phosphorylation Of An Active Site Serine In A Thdp- Dependent Enzyme By Phosphonate Inactivation Length = 528 Back     alignment and structure
>pdb|1PO7|A Chain A, High Resolution Structure Of E28a Mutant Benzoylformate Decarboxylase From Pseudomonas Putida Length = 528 Back     alignment and structure
>pdb|2FN3|A Chain A, High Resolution Structure Of S26a Mutant Of Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With Thiamine Thiazolone Diphosphate Length = 528 Back     alignment and structure
>pdb|1YBH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Acetohydroxyacid Synthase In Complex With A Sulfonylurea Herbicide Chlorimuron Ethyl Length = 590 Back     alignment and structure
>pdb|1JSC|A Chain A, Crystal Structure Of The Catalytic Subunit Of Yeast Acetohydroxyacid Synthase: A Target For Herbicidal Inhibitors Length = 630 Back     alignment and structure
>pdb|1N0H|A Chain A, Crystal Structure Of Yeast Acetohydroxyacid Synthase In Complex With A Sulfonylurea Herbicide, Chlorimuron Ethyl Length = 677 Back     alignment and structure
>pdb|2PAN|A Chain A, Crystal Structure Of E. Coli Glyoxylate Carboligase Length = 616 Back     alignment and structure
>pdb|2EZ4|A Chain A, Pyruvate Oxidase Variant F479w Length = 603 Back     alignment and structure
>pdb|1POW|A Chain A, The Refined Structures Of A Stabilized Mutant And Of Wild-Type Pyruvate Oxidase From Lactobacillus Plantarum Length = 585 Back     alignment and structure
>pdb|4FEE|A Chain A, High-Resolution Structure Of Pyruvate Oxidase In Complex With Reaction Intermediate 2-Hydroxyethyl-Thiamin Diphosphate Carbanion-Enamine, Crystal B Length = 603 Back     alignment and structure
>pdb|2C31|A Chain A, Crystal Structure Of Oxalyl-Coa Decarboxylase In Complex With The Cofactor Derivative Thiamin-2-Thiazolone Diphosphate And Adenosine Diphosphate Length = 568 Back     alignment and structure
>pdb|1Y9D|A Chain A, Pyruvate Oxidase Variant V265a From Lactobacillus Plantarum Length = 603 Back     alignment and structure
>pdb|1POX|A Chain A, The Refined Structures Of A Stabilized Mutant And Of Wild-Type Pyruvate Oxidase From Lactobacillus Plantarum Length = 585 Back     alignment and structure
>pdb|2PGN|A Chain A, The Crystal Structure Of Fad And Thdp-Dependent Cyclohexane-1,2-Dione Hydrolase In Complex With Cyclohexane-1,2-Dione Length = 589 Back     alignment and structure
>pdb|3LQ1|A Chain A, Crystal Structure Of 2-Succinyl-6-Hydroxy-2,4-Cyclohexadiene 1-Carboxylic Acid Synthase2-Oxoglutarate Decarboxylase From Listeria Monocytogenes Str. 4b F2365 Length = 578 Back     alignment and structure
>pdb|1UPB|A Chain A, Carboxyethylarginine Synthase From Streptomyces Clavuligerus Length = 573 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query545
2vbi_A566 Pyruvate decarboxylase; thiamine pyrophosphate, ly 0.0
2wvg_A568 PDC, pyruvate decarboxylase; thiamine diphosphate, 0.0
2vk8_A563 Pyruvate decarboxylase isozyme 1; asymmetric activ 0.0
1ovm_A552 Indole-3-pyruvate decarboxylase; thiamine diphosph 0.0
2vbf_A570 Branched-chain alpha-ketoacid decarboxylase; KDCA, 0.0
2nxw_A565 Phenyl-3-pyruvate decarboxylase; thiamine pyrophos 1e-145
3eya_A549 Pyruvate dehydrogenase [cytochrome]; pyruvate oxid 3e-34
2x7j_A604 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene - 8e-32
1v5e_A590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 4e-31
4feg_A603 Pyruvate oxidase; carbanion, structure activity re 3e-30
3lq1_A578 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1e-27
2q28_A564 Oxalyl-COA decarboxylase; lyase, oxalate degradati 3e-27
1q6z_A528 BFD, BFDC, benzoylformate decarboxylase; lyase, ca 3e-24
1ozh_A566 ALS, acetolactate synthase, catabolic; acetohydrox 1e-22
3hww_A556 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 8e-21
2uz1_A563 Benzaldehyde lyase; thiamine diphosphate, thiamine 2e-14
2uz1_A563 Benzaldehyde lyase; thiamine diphosphate, thiamine 2e-05
2pan_A616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 9e-14
2pan_A616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 3e-06
2c31_A568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 2e-09
2c31_A568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 8e-08
2c31_A568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
2iht_A573 Carboxyethylarginine synthase; thiamin diphosphate 1e-07
2iht_A573 Carboxyethylarginine synthase; thiamin diphosphate 2e-06
2iht_A573 Carboxyethylarginine synthase; thiamin diphosphate 1e-05
2pgn_A589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 3e-07
2pgn_A589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 3e-06
2pgn_A589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 4e-05
1ybh_A590 Acetolactate synthase, chloroplast; acetohydroxyac 8e-07
1ybh_A590 Acetolactate synthase, chloroplast; acetohydroxyac 3e-06
1ybh_A590 Acetolactate synthase, chloroplast; acetohydroxyac 8e-05
1t9b_A677 Acetolactate synthase, mitochondrial; acetohydroxy 1e-06
1t9b_A677 Acetolactate synthase, mitochondrial; acetohydroxy 1e-06
1t9b_A677 Acetolactate synthase, mitochondrial; acetohydroxy 1e-06
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus} Length = 566 Back     alignment and structure
 Score =  711 bits (1837), Expect = 0.0
 Identities = 223/508 (43%), Positives = 307/508 (60%), Gaps = 6/508 (1%)

Query: 28  TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARS 87
           T+G +LA RLV+IG K  F+V GD+NL LLD L+   ++  + CCNELN G++A+GYARS
Sbjct: 4   TVGMYLAERLVQIGLKHHFAVAGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARS 63

Query: 88  RGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQ 147
            G  A VVTF+VG +S +NA+ GAY+ENLPVI I G PNSND GT  ILHHTIG  D++ 
Sbjct: 64  NGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSY 123

Query: 148 ELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPV 207
           +L   + +TC+   + +   A   ID  I TAL+E KP Y+ I+CN+     P     PV
Sbjct: 124 QLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIAS--EPCVRPGPV 181

Query: 208 PFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIA 267
              L+    +   L+AAV+AT   L K+  PV++ G  +R A A  A   LAD     + 
Sbjct: 182 SSLLSEPEIDHTSLKAAVDATVALLEKSASPVMLLGSKLRAANALAATETLADKLQCAVT 241

Query: 268 IMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKK 327
           IM + KG  PE H  F G YWG VS+    E+VE++DA + + P+FNDYS+VG+S   K 
Sbjct: 242 IMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSAWPKG 301

Query: 328 EKAIIVQPHRVTVGNGPSLGWVFMADFLSALAKKLRKNTTALENYRRIYVPPGIPVKRAQ 387
              I+ +P RVTV  G +     +  FL ALA+K      +    ++  VP       + 
Sbjct: 302 PNVILAEPDRVTVD-GRAYDGFTLRAFLQALAEKAPARPAS---AQKSSVPTCSLTATSD 357

Query: 388 NEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGA 447
              L  + + +HI  +L+ +T ++AETGDSWFN  ++ LP     E +MQ+G IGWSV +
Sbjct: 358 EAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQWGHIGWSVPS 417

Query: 448 TLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPY 507
             G A  ++D++ +  +GDGSFQ+TAQE++ M+R     IIFLINN GY IE+ IHDGPY
Sbjct: 418 AFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPY 477

Query: 508 NVIKNWDYTGLVNAIHNGEGKCWTAKVS 535
           N IKNWDY GL+   + GEG     K +
Sbjct: 478 NYIKNWDYAGLMEVFNAGEGHGLGLKAT 505
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A* Length = 568 Back     alignment and structure
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A* Length = 563 Back     alignment and structure
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 Length = 552 Back     alignment and structure
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A* Length = 570 Back     alignment and structure
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A* Length = 565 Back     alignment and structure
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* Length = 549 Back     alignment and structure
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis} Length = 604 Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Length = 590 Back     alignment and structure
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A* Length = 603 Back     alignment and structure
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes} Length = 578 Back     alignment and structure
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* Length = 564 Back     alignment and structure
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X* Length = 528 Back     alignment and structure
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A* Length = 566 Back     alignment and structure
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* Length = 556 Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Length = 563 Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Length = 563 Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Length = 616 Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Length = 616 Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Length = 568 Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Length = 568 Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Length = 568 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Length = 573 Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Length = 573 Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Length = 573 Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Length = 589 Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Length = 589 Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Length = 589 Back     alignment and structure
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A* Length = 590 Back     alignment and structure
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A* Length = 590 Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Length = 677 Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Length = 677 Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Length = 677 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query545
2wvg_A568 PDC, pyruvate decarboxylase; thiamine diphosphate, 100.0
2vbi_A566 Pyruvate decarboxylase; thiamine pyrophosphate, ly 100.0
2vk8_A563 Pyruvate decarboxylase isozyme 1; asymmetric activ 100.0
2vbf_A570 Branched-chain alpha-ketoacid decarboxylase; KDCA, 100.0
3eya_A549 Pyruvate dehydrogenase [cytochrome]; pyruvate oxid 100.0
1ovm_A552 Indole-3-pyruvate decarboxylase; thiamine diphosph 100.0
2nxw_A565 Phenyl-3-pyruvate decarboxylase; thiamine pyrophos 100.0
4feg_A603 Pyruvate oxidase; carbanion, structure activity re 100.0
1t9b_A677 Acetolactate synthase, mitochondrial; acetohydroxy 100.0
1ybh_A590 Acetolactate synthase, chloroplast; acetohydroxyac 100.0
2pgn_A589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 100.0
1ozh_A566 ALS, acetolactate synthase, catabolic; acetohydrox 100.0
2uz1_A563 Benzaldehyde lyase; thiamine diphosphate, thiamine 100.0
1q6z_A528 BFD, BFDC, benzoylformate decarboxylase; lyase, ca 100.0
2pan_A616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 100.0
1v5e_A590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 100.0
2iht_A573 Carboxyethylarginine synthase; thiamin diphosphate 100.0
2x7j_A604 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene - 100.0
2q28_A564 Oxalyl-COA decarboxylase; lyase, oxalate degradati 100.0
3lq1_A578 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 100.0
2c31_A568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 100.0
3hww_A556 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 100.0
3cf4_G170 Acetyl-COA decarboxylase/synthase epsilon subunit; 99.82
1ytl_A174 Acetyl-COA decarboxylase/synthase complex epsilon 99.64
1yd7_A395 2-keto acid:ferredoxin oxidoreductase subunit alph 99.6
2c42_A 1231 Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, 99.59
2bfd_A 400 2-oxoisovalerate dehydrogenase alpha subunit; oxid 99.28
1w85_A 368 Pyruvate dehydrogenase E1 component, alpha subunit 99.27
1umd_A 367 E1-alpha, 2-OXO acid dehydrogenase alpha subunit; 99.27
2o1x_A 629 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, 99.23
3mos_A 616 Transketolase, TK; thiamin diphosphate TPP THDP en 99.21
1qs0_A 407 2-oxoisovalerate dehydrogenase alpha-subunit; hete 99.2
3l84_A 632 Transketolase; TKT, structural genomics, center fo 99.19
3kom_A 663 Transketolase; rossmann fold, csgid, transferase, 99.19
3uk1_A 711 Transketolase; structural genomics, seattle struct 99.19
3m49_A 690 Transketolase; alpha-beta-alpha sandwich, csgid, t 99.16
2r8o_A 669 Transketolase 1, TK 1; reaction intermediate, calc 99.14
2e6k_A 651 Transketolase; structural genomics, NPPSFA, nation 99.11
2o1s_A 621 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thia 99.11
1itz_A 675 Transketolase; calvin cycle, cofactor, thiamine py 99.11
1gpu_A 680 Transketolase; transferase(ketone residues); HET: 99.1
2ozl_A 365 PDHE1-A type I, pyruvate dehydrogenase E1 componen 99.04
1r9j_A 673 Transketolase; domains, EACH of the alpha/beta typ 98.98
3rim_A 700 Transketolase, TK; TPP, transferase; HET: TPP; 2.4 98.54
2yic_A 868 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.9 98.29
2c42_A 1231 Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, 98.25
2jgd_A 933 2-oxoglutarate dehydrogenase E1 component; flavopr 98.08
2xt6_A 1113 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET 98.05
2qtc_A 886 Pyruvate dehydrogenase E1 component; thiamin dipho 98.0
1umd_B324 E1-beta, 2-OXO acid dehydrogenase beta subunit; al 95.82
1qs0_B338 2-oxoisovalerate dehydrogenase beta-subunit; heter 95.51
3ahc_A 845 Phosphoketolase, xylulose 5-phosphate/fructose 6-p 95.45
1w85_B324 Pyruvate dehydrogenase E1 component, beta subunit; 95.32
2bfd_B342 2-oxoisovalerate dehydrogenase beta subunit; oxido 95.27
2ozl_B341 PDHE1-B, pyruvate dehydrogenase E1 component subun 94.92
3mos_A616 Transketolase, TK; thiamin diphosphate TPP THDP en 94.83
1ik6_A369 Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, o 93.98
2o1s_A621 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thia 93.34
2r8o_A669 Transketolase 1, TK 1; reaction intermediate, calc 93.29
3l84_A632 Transketolase; TKT, structural genomics, center fo 92.1
2o1x_A629 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, 91.91
2e6k_A651 Transketolase; structural genomics, NPPSFA, nation 91.4
3kom_A663 Transketolase; rossmann fold, csgid, transferase, 90.82
1d4o_A184 NADP(H) transhydrogenase; nucleotide-binding fold, 90.69
1pno_A180 NAD(P) transhydrogenase subunit beta; nucleotide b 90.53
1efv_A315 Electron transfer flavoprotein; electron transport 90.14
1djl_A207 Transhydrogenase DIII; rossmann fold dinucleotide 90.06
1o97_D320 Electron transferring flavoprotein alpha-subunit; 89.89
2bru_C186 NAD(P) transhydrogenase subunit beta; paramagnetic 89.82
2fsv_C203 NAD(P) transhydrogenase subunit beta; NAD(P) trans 89.62
1s5p_A235 NAD-dependent deacetylase; protein deacetylase, SI 89.08
1gpu_A680 Transketolase; transferase(ketone residues); HET: 88.74
1r9j_A673 Transketolase; domains, EACH of the alpha/beta typ 88.53
1itz_A675 Transketolase; calvin cycle, cofactor, thiamine py 88.34
1w85_A368 Pyruvate dehydrogenase E1 component, alpha subunit 88.24
2hjh_A354 NAD-dependent histone deacetylase SIR2; protein, s 87.85
3uk1_A711 Transketolase; structural genomics, seattle struct 87.81
1efp_A307 ETF, protein (electron transfer flavoprotein); ele 85.51
1yc5_A246 NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, 85.3
3pki_A355 NAD-dependent deacetylase sirtuin-6; ADP ribose, s 85.14
1m2k_A249 Silent information regulator 2; protein-ligand com 84.96
1qs0_A407 2-oxoisovalerate dehydrogenase alpha-subunit; hete 84.95
3k35_A318 NAD-dependent deacetylase sirtuin-6; rossmann fold 84.65
3lq1_A578 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 83.71
3hww_A556 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 83.51
4iao_A492 NAD-dependent histone deacetylase SIR2; protein co 83.24
1v5e_A590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 83.08
1ma3_A253 SIR2-AF2, transcriptional regulatory protein, SIR2 83.07
3m49_A690 Transketolase; alpha-beta-alpha sandwich, csgid, t 83.07
2ozl_A365 PDHE1-A type I, pyruvate dehydrogenase E1 componen 82.78
3rim_A700 Transketolase, TK; TPP, transferase; HET: TPP; 2.4 82.53
1q1a_A289 HST2 protein; ternary complex, histone deacetylase 81.62
3riy_A273 NAD-dependent deacetylase sirtuin-5; desuccinylase 81.25
2pan_A616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 81.16
3glr_A285 NAD-dependent deacetylase sirtuin-3, mitochondria; 80.11
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A* Back     alignment and structure
Probab=100.00  E-value=5.3e-92  Score=768.49  Aligned_cols=513  Identities=42%  Similarity=0.725  Sum_probs=434.5

Q ss_pred             CCccHHHHHHHHHHHcCCCEEEecCCCChHHHHHhhhcCCCCeEEecCchhHHHHHHhHHhhhcCceEEEEcCCcchHHH
Q 009060           25 SVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSV  104 (545)
Q Consensus        25 ~~~~~a~~i~~~L~~~GV~~vFg~pG~~~~~l~~al~~~~~i~~i~~~hE~~A~~~A~gyar~tg~gv~~~t~GpG~~n~  104 (545)
                      |+|+++++|++.|+++||++|||+||+++++|+++|.++++|++|.++||++|+|||+||+|+||++||++|+|||++|+
T Consensus         1 m~~~~a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~~~~i~~i~~~~E~~Aa~~A~Gyar~tg~~v~~~TsGpG~~N~   80 (568)
T 2wvg_A            1 MSYTVGTYLAERLVQIGLKHHFAVAGDYNLVLLDNLLLNKNMEQVYCCNELNCGFSAEGYARAKGAAAAVVTYSVGALSA   80 (568)
T ss_dssp             -CEEHHHHHHHHHHHTTCSEEEECCCTTTHHHHHHHHTCTTSEEEECSSHHHHHHHHHHHHHHHSCEEEEECTTTTHHHH
T ss_pred             CCcCHHHHHHHHHHHcCCCEEEeCCCCccHHHHHHHhccCCceEeccCcHHHHHHHHHHHHHhhCCeEEEEeCCCCHHHH
Confidence            46899999999999999999999999999999999987668999999999999999999999999999999999999999


Q ss_pred             HHHHHHhHhcCCcEEEEeCCCCCcccCCCcccccccCCCChHHHHHHhhhceeEEEEeCChhhHHHHHHHHHHHhhhCCC
Q 009060          105 LNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESK  184 (545)
Q Consensus       105 ~~~l~~A~~~~~Pllvi~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~k~~~~v~~~~~~~~~l~~A~~~a~~~~G  184 (545)
                      ++||++|+.+++|||+|||+++....+++..+||.++.+|++||.++++++|||+.++++++++++.+++||+.|.+++|
T Consensus        81 ~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~tk~~~~v~~~~~~~~~l~~A~~~A~~~~G  160 (568)
T 2wvg_A           81 FDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLEMAKNITAAAEAIYTPEEAPAKIDHVIKTALREKK  160 (568)
T ss_dssp             HHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCCHHHHHHTTSCSCEEEECSGGGHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHhhhCCCEEEEeCCCChhHhccCcceeeeccccchHHHHHHHHhhEeEEEEeCCHHHHHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999988887777777666677799999999999999999999999999999999999889


Q ss_pred             cEEEEeCCCCCCCCCCCCCCCCCCcccCCCCCCchhhHHHHHHHHHHHHhcCCCEEEcCccccccchHHHHHHHHHHhCC
Q 009060          185 PVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGY  264 (545)
Q Consensus       185 PV~l~iP~dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~a~rpvi~~G~g~~~~~a~~~l~~lae~~~~  264 (545)
                      ||||+||.|++..  +.......+....+.......+++.+++++++|.++|||+|++|.|+.++++.+++++|+|++++
T Consensus       161 PV~l~iP~dv~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~  238 (568)
T 2wvg_A          161 PVYLEIACNIASM--PCAAPGPASALFNDEASDEASLNAAVEETLKFIANRDKVAVLVGSKLRAAGAEEAAVKFADALGG  238 (568)
T ss_dssp             CEEEEEEGGGTTS--EECEECCTHHHHCCCCCCHHHHHHHHHHHHHHHTTCCCEEEEECTTTTTTTCHHHHHHHHHHHCC
T ss_pred             CEEEEechhHhcC--cccCCCcccccccCCCCCccccHHHHHHHHHHHHhCCCCEEEECccccccchHHHHHHHHHHhCC
Confidence            9999999999763  21110011110111111122345679999999999999999999999998999999999999999


Q ss_pred             ceEeCCCCccCCCCCCCCccceecCCCCCHHHHHHhhcCCEEEEeCCCCCCCcccccccCCCCCcEEEEcCCcceecCCC
Q 009060          265 PIAIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVGNGP  344 (545)
Q Consensus       265 Pv~tt~~~kg~~~~~hpl~~G~~~G~~~~~~~~~~l~~aD~vl~lG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~  344 (545)
                      ||++|++|||.||++||+++|.|.|..+++.++++++++|+||.+|+++.++.+..|..+.++.++||||.|+.+++ +.
T Consensus       239 Pv~~t~~~kg~~~~~~p~~~G~~~g~~~~~~~~~~l~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~-~~  317 (568)
T 2wvg_A          239 AVATMAAAKSFFPEENPHYIGTSWGEVSYPGVEKTMKEADAVIALAPVFNDYSTTGWTDIPDPKKLVLAEPRSVVVN-GI  317 (568)
T ss_dssp             EEEEEGGGTTSSCTTSTTEEEEECGGGSCTTHHHHHHHCSEEEEESCCCBTTTTTTTTCCCCTTTEEEECSSEEEET-TE
T ss_pred             CEEEchhcCccCCCCCCceeccccCCcCCHHHHHHHHhCCEEEEECCCcccccccccccCCCCCcEEEEeCChhhcC-Ce
Confidence            99999999999999999999998788888888999999999999999998888777766556789999999999997 55


Q ss_pred             ccccccHHHHHHHHHHHhccCchhhhhhhhhcC-CCCCCCcCCCCCCcCHHHHHHHHHhhCCCCCEEEecCCcccccccc
Q 009060          345 SLGWVFMADFLSALAKKLRKNTTALENYRRIYV-PPGIPVKRAQNEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQK  423 (545)
Q Consensus       345 ~~~~~d~~~~l~~L~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ivv~d~G~~~~~~~~  423 (545)
                      .+.+++++.+|++|.+.++.+...|..|.+... ............++++.++++.|.+.+|++++++.|+|++.+...+
T Consensus       318 ~~~~~~~~~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~  397 (568)
T 2wvg_A          318 RFPSVHLKDYLTRLAQKVSKKTGALDFFKSLNAGELKKAAPADPSAPLVNAEIARQVEALLTPNTTVIAETGDSWFNAQR  397 (568)
T ss_dssp             EEESCCHHHHHHHHHHHCCCCCHHHHHHHHTTCCSCCCCCCCCTTSBCCHHHHHHHHHTTCCTTEEEEECSSHHHHHHHT
T ss_pred             ecCCCCHHHHHHHHHHhccccccchhhhhhhhhhcccccccCCCCCccCHHHHHHHHHHhCCCCCEEEEcCcHHHHHHhh
Confidence            666778999999999887643333444543221 1111111122457999999999999999999999999998755556


Q ss_pred             ccccCCCeeEeccCccccchhHHHHHHhhhhcCCCeEEEEEcchhhcccHHHHHHHHHhCCCeEEEEEeCCchhhhhhhc
Q 009060          424 LRLPENCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH  503 (545)
Q Consensus       424 ~~~~~~~~~~~~~~~g~mG~~l~aAiGaala~p~r~vv~i~GDGsf~~~~~eL~ta~~~~lpi~ivV~NN~~~g~~~~~~  503 (545)
                      +..+++.+++.+.++|+||+++|+|+|+++|+|+++||+++|||+|+|+++||+|++++++|+++||+||++|++.+.++
T Consensus       398 ~~~~~~~~~~~~~~~g~~G~~l~~A~G~ala~~~~~vv~i~GDGs~~~~~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~  477 (568)
T 2wvg_A          398 MKLPNGARVEYEMQWGHIGWSVPAAFGYAVGAPERRNILMVGDGSFQLTAQEVAQMVRLKLPVIIFLINNYGYTIEVMIH  477 (568)
T ss_dssp             CCCCTTCEEECCTTTCCTTTHHHHHHHHHHHCTTSEEEEEEEHHHHHHHGGGHHHHHHTTCCCEEEEEECSSCHHHHTTS
T ss_pred             cccCCCCeEEeCCCcchhhhHHHHHHHHHHhCCCCcEEEEEcChhHhccHHHHHHHHHcCCCcEEEEEECCcceEeeeec
Confidence            66777778999999999999999999999999999999999999999999999999999999999999999999954444


Q ss_pred             CCCCCCCCCCCHHHHHHHcCCCC----CceeEEEEeeceee
Q 009060          504 DGPYNVIKNWDYTGLVNAIHNGE----GKCWTAKVSIYKMC  540 (545)
Q Consensus       504 ~~~~~~l~~~d~~~lA~a~G~~~----~~~~~~~v~~~~~~  540 (545)
                      +..|.+++++||.++|++||++.    ....+++|++.+|+
T Consensus       478 ~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~~~~~v~~~~el  518 (568)
T 2wvg_A          478 DGPYNNIKNWDYAGLMEVFNGNGGYDSGAGKGLKAKTGGEL  518 (568)
T ss_dssp             CCGGGCCCCCCHHHHHHHHHCTTSSSCCCCEEEEESBHHHH
T ss_pred             cCCCcCCCCCCHHHHHHHhCCCcccccCCcceEEeCCHHHH
Confidence            44566778899999999999930    11246788887775
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus} Back     alignment and structure
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A* Back     alignment and structure
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A* Back     alignment and structure
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* Back     alignment and structure
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 Back     alignment and structure
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A* Back     alignment and structure
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A* Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Back     alignment and structure
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A* Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Back     alignment and structure
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X* Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Back     alignment and structure
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis} Back     alignment and structure
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* Back     alignment and structure
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes} Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Back     alignment and structure
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* Back     alignment and structure
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri} Back     alignment and structure
>1ytl_A Acetyl-COA decarboxylase/synthase complex epsilon 2; structural genomics; 1.80A {Archaeoglobus fulgidus} SCOP: c.31.1.6 Back     alignment and structure
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus} Back     alignment and structure
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A* Back     alignment and structure
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ... Back     alignment and structure
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A* Back     alignment and structure
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A* Back     alignment and structure
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans} Back     alignment and structure
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A* Back     alignment and structure
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A Back     alignment and structure
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A* Back     alignment and structure
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp} Back     alignment and structure
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A* Back     alignment and structure
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A* Back     alignment and structure
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A* Back     alignment and structure
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus} Back     alignment and structure
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli} Back     alignment and structure
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A* Back     alignment and structure
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A* Back     alignment and structure
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis} Back     alignment and structure
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A* Back     alignment and structure
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A* Back     alignment and structure
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B* Back     alignment and structure
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis} Back     alignment and structure
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A* Back     alignment and structure
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B* Back     alignment and structure
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B Back     alignment and structure
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A* Back     alignment and structure
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B* Back     alignment and structure
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ... Back     alignment and structure
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B Back     alignment and structure
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A* Back     alignment and structure
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2 Back     alignment and structure
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli} Back     alignment and structure
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A* Back     alignment and structure
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A* Back     alignment and structure
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans} Back     alignment and structure
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus} Back     alignment and structure
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp} Back     alignment and structure
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4 Back     alignment and structure
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C* Back     alignment and structure
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R* Back     alignment and structure
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A* Back     alignment and structure
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D* Back     alignment and structure
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C* Back     alignment and structure
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5 Back     alignment and structure
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A* Back     alignment and structure
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A* Back     alignment and structure
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae} Back     alignment and structure
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A* Back     alignment and structure
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2 Back     alignment and structure
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A* Back     alignment and structure
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A* Back     alignment and structure
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A* Back     alignment and structure
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A Back     alignment and structure
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens} Back     alignment and structure
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes} Back     alignment and structure
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* Back     alignment and structure
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Back     alignment and structure
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A* Back     alignment and structure
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A* Back     alignment and structure
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A* Back     alignment and structure
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis} Back     alignment and structure
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A* Back     alignment and structure
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A* Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Back     alignment and structure
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 545
d1zpda1175 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymom 3e-33
d1zpda2186 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomon 8e-28
d1pvda2180 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's 3e-27
d1pvda1179 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker 7e-26
d1ovma1161 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxyla 6e-25
d1zpda3204 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymom 9e-22
d1t9ba2175 c.36.1.5 (A:89-263) Acetohydroxyacid synthase cata 3e-21
d1ovma2178 c.36.1.5 (A:3-180) Indole-3-pyruvate decarboxylase 3e-21
d1ybha2195 c.36.1.5 (A:86-280) Acetohydroxyacid synthase cata 3e-20
d1pvda3196 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker 1e-17
d1ovma3196 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxyla 9e-16
d2ez9a2174 c.36.1.5 (A:9-182) Pyruvate oxidase {Lactobacillus 1e-11
d2djia2184 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus vi 2e-10
d1ozha2181 c.36.1.5 (A:7-187) Catabolic acetolactate synthase 6e-10
d1ytla1158 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synth 1e-09
d2ihta1177 c.31.1.3 (A:198-374) Carboxyethylarginine synthase 1e-09
d1ozha1179 c.31.1.3 (A:188-366) Catabolic acetolactate syntha 5e-09
d2ihta2186 c.36.1.5 (A:12-197) Carboxyethylarginine synthase 3e-07
d1q6za1160 c.31.1.3 (A:182-341) Benzoylformate decarboxylase 8e-07
d2ji7a1175 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxa 2e-06
d2ji7a2188 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalo 1e-05
d1ybha1179 c.31.1.3 (A:281-459) Acetohydroxyacid synthase cat 5e-05
d1q6za2180 c.36.1.5 (A:2-181) Benzoylformate decarboxylase {P 9e-05
d2ez9a3228 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacill 2e-04
d1t9ba1171 c.31.1.3 (A:290-460) Acetohydroxyacid synthase cat 0.003
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Length = 175 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Pyruvate decarboxylase
species: Zymomonas mobilis [TaxId: 542]

 Score =  122 bits (307), Expect = 3e-33
 Identities = 53/166 (31%), Positives = 93/166 (56%), Gaps = 1/166 (0%)

Query: 214 KVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGK 273
           + S++  L AAV+ T  F+    K  ++ G  +R A A++A ++  DA G  +A M + K
Sbjct: 1   EASDEASLNAAVDETLKFIANRDKVAVLVGSKLRAAGAEEAAVKFTDALGGAVATMAAAK 60

Query: 274 GLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIV 333
              PE +  +IGT WG VS     + ++ ADA + + P+FNDYS+ G++ +   +K ++ 
Sbjct: 61  SFFPEENALYIGTSWGEVSYPGVEKTMKEADAVIALAPVFNDYSTTGWTDIPDPKKLVLA 120

Query: 334 QPHRVTVGNGPSLGWVFMADFLSALAKKLRKNTTALENYRRIYVPP 379
           +P  V V NG     V + D+L+ LA+K+ K T +L+ ++ +    
Sbjct: 121 EPRSVVV-NGIRFPSVHLKDYLTRLAQKVSKKTGSLDFFKSLNAGE 165
>d1zpda2 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Length = 186 Back     information, alignment and structure
>d1pvda2 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 180 Back     information, alignment and structure
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 179 Back     information, alignment and structure
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Length = 161 Back     information, alignment and structure
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Length = 204 Back     information, alignment and structure
>d1t9ba2 c.36.1.5 (A:89-263) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 175 Back     information, alignment and structure
>d1ovma2 c.36.1.5 (A:3-180) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Length = 178 Back     information, alignment and structure
>d1ybha2 c.36.1.5 (A:86-280) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Length = 195 Back     information, alignment and structure
>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 196 Back     information, alignment and structure
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Length = 196 Back     information, alignment and structure
>d2ez9a2 c.36.1.5 (A:9-182) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Length = 174 Back     information, alignment and structure
>d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Length = 184 Back     information, alignment and structure
>d1ozha2 c.36.1.5 (A:7-187) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Length = 181 Back     information, alignment and structure
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus [TaxId: 2234]} Length = 158 Back     information, alignment and structure
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 177 Back     information, alignment and structure
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Length = 179 Back     information, alignment and structure
>d2ihta2 c.36.1.5 (A:12-197) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 186 Back     information, alignment and structure
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Length = 160 Back     information, alignment and structure
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Length = 175 Back     information, alignment and structure
>d2ji7a2 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Length = 188 Back     information, alignment and structure
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Length = 179 Back     information, alignment and structure
>d1q6za2 c.36.1.5 (A:2-181) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Length = 180 Back     information, alignment and structure
>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Length = 228 Back     information, alignment and structure
>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 171 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query545
d1zpda2186 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 100.0
d1pvda2180 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 100.0
d2ez9a2174 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 100.0
d2djia2184 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 100.0
d1t9ba2175 Acetohydroxyacid synthase catalytic subunit {Baker 100.0
d1ybha2195 Acetohydroxyacid synthase catalytic subunit {Thale 100.0
d1ozha2181 Catabolic acetolactate synthase {Klebsiella pneumo 100.0
d2ihta2186 Carboxyethylarginine synthase {Streptomyces clavul 100.0
d1q6za2180 Benzoylformate decarboxylase {Pseudomonas putida [ 100.0
d2ji7a2188 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 100.0
d1ovma2178 Indole-3-pyruvate decarboxylase {Enterobacter cloa 100.0
d2ez9a3228 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 100.0
d1ybha3208 Acetohydroxyacid synthase catalytic subunit {Thale 99.98
d1zpda3204 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 99.97
d2djia3229 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 99.97
d1pvda3196 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 99.97
d1ovma3196 Indole-3-pyruvate decarboxylase {Enterobacter cloa 99.97
d1t9ba3227 Acetohydroxyacid synthase catalytic subunit {Baker 99.97
d2ihta3198 Carboxyethylarginine synthase {Streptomyces clavul 99.97
d1q6za3183 Benzoylformate decarboxylase {Pseudomonas putida [ 99.97
d1ozha3192 Catabolic acetolactate synthase {Klebsiella pneumo 99.97
d1zpda1175 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 99.96
d1ovma1161 Indole-3-pyruvate decarboxylase {Enterobacter cloa 99.95
d2ji7a3183 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 99.95
d1pvda1179 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 99.95
d1ybha1179 Acetohydroxyacid synthase catalytic subunit {Thale 99.94
d2ihta1177 Carboxyethylarginine synthase {Streptomyces clavul 99.93
d2ez9a1183 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 99.93
d2djia1177 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 99.93
d1ozha1179 Catabolic acetolactate synthase {Klebsiella pneumo 99.92
d1t9ba1171 Acetohydroxyacid synthase catalytic subunit {Baker 99.92
d2ji7a1175 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 99.91
d1q6za1160 Benzoylformate decarboxylase {Pseudomonas putida [ 99.87
d1ytla1158 Acetyl-CoA decarbonylase/synthase complex epsilon 99.73
d2c42a1257 Pyruvate-ferredoxin oxidoreductase, PFOR, domain I 98.72
d2c42a2 447 Pyruvate-ferredoxin oxidoreductase, PFOR, domains 98.14
d1w85a_ 365 Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus st 97.96
d1qs0a_ 407 2-oxoisovalerate dehydrogenase (E1B), PP module {P 97.89
d2bfda1 395 Branched-chain alpha-keto acid dehydrogenase, PP m 97.89
d1umda_ 362 Branched-chain alpha-keto acid dehydrogenase, PP m 97.86
d1r9ja2 336 Transketolase (TK), PP module {Leishmania mexicana 97.77
d1gpua1 335 Transketolase (TK), PP module {Baker's yeast (Sacc 97.68
d2r8oa2 331 Transketolase (TK), PP module {Escherichia coli [T 97.68
d1itza1 338 Transketolase (TK), PP module {Maize (Zea mays) [T 97.45
d2ozla1 361 E1-beta subunit of pyruvate dehydrogenase (PP modu 97.08
d1t9ba3227 Acetohydroxyacid synthase catalytic subunit {Baker 95.67
d1efva2124 C-terminal domain of the electron transfer flavopr 95.55
d2ji7a3183 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 95.32
d2ez9a3228 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 95.28
d1zpda3204 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 94.97
d3clsd2123 C-terminal domain of the electron transfer flavopr 94.89
d2ieaa2 415 Pyruvate dehydrogenase E1 component, PP module {Es 94.82
d2djia3229 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 94.25
d2ihta3198 Carboxyethylarginine synthase {Streptomyces clavul 94.05
d1r9ja1190 Transketolase (TK), Pyr module {Leishmania mexican 94.04
d1itza2192 Transketolase (TK), Pyr module {Maize (Zea mays) [ 93.76
d2r8oa1195 Transketolase (TK), Pyr module {Escherichia coli [ 93.67
d1ybha3208 Acetohydroxyacid synthase catalytic subunit {Thale 93.62
d1gpua2197 Transketolase (TK), Pyr module {Baker's yeast (Sac 93.17
d1ozha3192 Catabolic acetolactate synthase {Klebsiella pneumo 92.23
d1s5pa_235 NAD-dependent deacetylase CobB {Escherichia coli [ 90.11
d1qs0a_407 2-oxoisovalerate dehydrogenase (E1B), PP module {P 89.98
d1pnoa_180 Transhydrogenase domain III (dIII) {Rhodospirillum 89.34
d1d4oa_177 Transhydrogenase domain III (dIII) {Cow (Bos tauru 89.04
d1ovma3196 Indole-3-pyruvate decarboxylase {Enterobacter cloa 88.91
d1w85a_365 Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus st 88.36
d1q6za3183 Benzoylformate decarboxylase {Pseudomonas putida [ 88.1
d1umda_362 Branched-chain alpha-keto acid dehydrogenase, PP m 87.76
d1m2ka_249 AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeo 87.22
d2bfda1395 Branched-chain alpha-keto acid dehydrogenase, PP m 87.13
d1yc5a1245 NAD-dependent deacetylase NpdA {Thermotoga maritim 87.02
d1ma3a_252 AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeog 86.85
d2ozla1361 E1-beta subunit of pyruvate dehydrogenase (PP modu 85.36
d2b4ya1267 NAD-dependent deacetylase sirtuin-5 {Human (Homo s 84.26
d1pvda3196 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 82.31
>d1zpda2 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: Pyruvate oxidase and decarboxylase Pyr module
domain: Pyruvate decarboxylase
species: Zymomonas mobilis [TaxId: 542]

Probab=100.00  E-value=2.5e-43  Score=324.88  Aligned_cols=171  Identities=47%  Similarity=0.830  Sum_probs=161.6

Q ss_pred             CccHHHHHHHHHHHcCCCEEEecCCCChHHHHHhhhcCCCCeEEecCchhHHHHHHhHHhhhcC-ceEEEEcCCcchHHH
Q 009060           26 VGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRG-VGACVVTFTVGGLSV  104 (545)
Q Consensus        26 ~~~~a~~i~~~L~~~GV~~vFg~pG~~~~~l~~al~~~~~i~~i~~~hE~~A~~~A~gyar~tg-~gv~~~t~GpG~~n~  104 (545)
                      ++|++|+|++.|+++||++|||+||+.+++|++++.++++|++|.+|||++|+|||+||+|+|| +++| +|+|||++|+
T Consensus         1 s~Tv~~~l~~~L~~~Gv~~vFgvpG~~~~~l~dal~~~~~i~~v~~rhE~~A~~mA~gyar~tg~~~v~-~t~GpG~~N~   79 (186)
T d1zpda2           1 SYTVGTYLAERLVQIGLKHHFAVAGDYNLVLLDNLLLNKNMEQVYCCNELNCGFSAEGYARAKGAAAAV-VTYSVGALSA   79 (186)
T ss_dssp             CCBHHHHHHHHHHHTTCSEEEECCCTTTHHHHHHHHTCTTSEEEECSSHHHHHHHHHHHHHHHSCEEEE-ECTTTTHHHH
T ss_pred             CeeHHHHHHHHHHHCCCCEEEEeCChhHHHHHHHHHHcCCceEeeeccccceehhhhhhhhccccceeE-eeccccchhh
Confidence            4799999999999999999999999999999999988779999999999999999999999999 6655 5899999999


Q ss_pred             HHHHHHhHhcCCcEEEEeCCCCCcccCCCcccccccCCCChHHHHHHhhhceeEEEEeCChhhHHHHHHHHHHHhhhCCC
Q 009060          105 LNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESK  184 (545)
Q Consensus       105 ~~~l~~A~~~~~Pllvi~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~k~~~~v~~~~~~~~~l~~A~~~a~~~~G  184 (545)
                      ++||++||.+++|||+|+|+.++...+++...||.++..++.+|.++++++|||+.++.+++++++.+++|++.|.++||
T Consensus        80 ~~gl~~A~~~~~Pvl~isg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vtk~~~~v~~~~~~~~~i~~A~~~A~~~~~  159 (186)
T d1zpda2          80 FDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLEMAKNITAAAEAIYTPEEAPAKIDHVIKTALREKK  159 (186)
T ss_dssp             HHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCCHHHHHHGGGCSCEEEECSGGGHHHHHHHHHHHHHHHTC
T ss_pred             hhhhhhhhhcccceEEEecccCcccccCCCcceeecCCcchhhhhhccCCceeeeeEcCCHHHHHHHHHHHHHHHhhCCC
Confidence            99999999999999999999999988888888888888888899999999999999999999999999999999999889


Q ss_pred             cEEEEeCCCCCCC
Q 009060          185 PVYISISCNLPGI  197 (545)
Q Consensus       185 PV~l~iP~dv~~~  197 (545)
                      ||||+||.|++.+
T Consensus       160 PV~l~iP~Dv~~~  172 (186)
T d1zpda2         160 PVYLEIACNIASM  172 (186)
T ss_dssp             CEEEEEETTSTTS
T ss_pred             CEEEECCcchhhC
Confidence            9999999999873
>d1pvda2 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ez9a2 c.36.1.5 (A:9-182) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1t9ba2 c.36.1.5 (A:89-263) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ybha2 c.36.1.5 (A:86-280) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1ozha2 c.36.1.5 (A:7-187) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2ihta2 c.36.1.5 (A:12-197) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1q6za2 c.36.1.5 (A:2-181) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2ji7a2 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1ovma2 c.36.1.5 (A:3-180) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1t9ba3 c.36.1.9 (A:461-687) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2c42a1 c.36.1.8 (A:2-258) Pyruvate-ferredoxin oxidoreductase, PFOR, domain I {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure
>d2c42a2 c.36.1.12 (A:786-1232) Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure
>d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1r9ja2 c.36.1.10 (A:1-336) Transketolase (TK), PP module {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d1gpua1 c.36.1.10 (A:3-337) Transketolase (TK), PP module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2r8oa2 c.36.1.10 (A:2-332) Transketolase (TK), PP module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1itza1 c.36.1.10 (A:10-347) Transketolase (TK), PP module {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1t9ba3 c.36.1.9 (A:461-687) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1efva2 c.31.1.2 (A:208-331) C-terminal domain of the electron transfer flavoprotein alpha subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d3clsd2 c.31.1.2 (D:196-318) C-terminal domain of the electron transfer flavoprotein alpha subunit {Methylophilus methylotrophus [TaxId: 17]} Back     information, alignment and structure
>d2ieaa2 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1r9ja1 c.36.1.6 (A:337-526) Transketolase (TK), Pyr module {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d1itza2 c.36.1.6 (A:348-539) Transketolase (TK), Pyr module {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d2r8oa1 c.36.1.6 (A:333-527) Transketolase (TK), Pyr module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1gpua2 c.36.1.6 (A:338-534) Transketolase (TK), Pyr module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1pnoa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII) {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1d4oa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure