Citrus Sinensis ID: 009109

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540---
Protein Sequence
MRNPSVRAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIGWSRD
Secondary Structure (PSIPRED)
cccccccEEEccccccEEcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcHHccccccccccccccccccEEEEEccEEEEEEccccHHHHccHHHHHHHHHHccEEEEccccccHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHccccEEEEcccccHHHHHHHHHHcccccccccccccccEEEcccccHHHHHHHHHHHccccccccccccccEEEEccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccEEEEcccccccccEEccEEEcccccccccccccccccccccEEEccHHHHHHHHHccccccEEEEccccHHHHHHHHHHccccccccccccHHHccccccccccccccccccccccccccccccccEEEcccccccccccccccHHHHHHHHHHHcccHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccEEEEEccEEEEcccccEEEcEccccccEEEEEEEEEEEccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccEEcccccEEEEEEcEEccEEEEEcccccHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHcccccEEEEEccccccccccccccccEEEEcccHHHHHHHHHHHHHHcccEEEEcccccccEEEccccHHHHHHHHHHHHHHHccccEEccccEEEEcHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHccHcccEEEccEcccccccEccEEEEccccccHHHcccccccEEEEEEEccHHHHHHHHHccccccEEEEEccEHHHHHHHHHHccccEEEEcccccccccccccccccccccccHHHHHHHHHHHcEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mrnpsvrafqdfstgaaclNKSFIYNYtyrknqthisfpylsltsfscrcsaTMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHkdlskppfetFISEISMTKSSCKLALKELKYwtkpekaktslttypssaeiisePLGVVLVISTwnypfllsldPVIGAIAAgnavvlkpseiapATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKilytgsprvGRIVMAAAAKHLTPVILElggkspavvDSTINLQVTTRRIIAGKWmanngqacigvdyiittkdfaPKLIDSLRNELKEffgknpmeskdlsrivnPFHFARLASLldedkvsdkivyggqrdekqlkiaptilldvpddstimkeeifgpllpivTVEKIEDSfdvikskpkplaayffsddEQMKKEFVQNisaggivfndTIVHTtvsslpfggvgesgmgsyhgkfsfdafsHKKAVLYRsfngdsttryppytaEKQKLLRALFNGNIFGLLLALIGWSRD
Flexible Loop (DISEMBL)
mrnpsvrafqdfstgaacLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRnnynsrktksyewRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELkywtkpekaktslttypssaeiISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFgknpmeskdlsriVNPFHFARLaslldedkVSDKIVyggqrdekqlkiaptiLLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSfngdsttrypPYTAEKQKLLRALFNGNIFGLLLALIGWSRD
Low Complexity Region (SEG)
MRNPSVRAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMieekeeeiieaiHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPvigaiaagnavvLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIGWSRD
Disordered region (IsUnstruct)
********FQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATM***********************************WRM*QIQSIANMI*****EIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN*****DLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIGW***
Disordered Region (DISOPRED)
********FQDFSTGAACLNKSFIYNYTYRKN***I********************************AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIGWSR*
Disordered Region (DISEMBL)
MRNPSVRAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIGWSRD
Disordered Region (DISPRO)
********FQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIGWSRD
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRNPSVRAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQxxxxxxxxxxxxxxxxxxxxxDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIGWSRD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	543	2.2.26 [Sep-21-2011]
Q8W033	550	Aldehyde dehydrogenase fa	yes	no	0.909	0.898	0.670	0.0
Q70DU8	484	Aldehyde dehydrogenase fa	no	no	0.876	0.983	0.661	0.0
Q8VXQ2	479	Aldehyde dehydrogenase OS	N/A	no	0.880	0.997	0.625	0.0
Q70E96	484	Aldehyde dehydrogenase fa	no	no	0.865	0.971	0.488	1e-136
Q5XI42	468	Aldehyde dehydrogenase fa	yes	no	0.819	0.950	0.451	1e-117
Q80VQ0	468	Aldehyde dehydrogenase fa	yes	no	0.819	0.950	0.449	1e-116
Q1JPA0	468	Aldehyde dehydrogenase fa	yes	no	0.825	0.957	0.448	1e-113
P11883	453	Aldehyde dehydrogenase, d	no	no	0.810	0.971	0.454	1e-113
P43353	468	Aldehyde dehydrogenase fa	yes	no	0.819	0.950	0.433	1e-113
P30838	453	Aldehyde dehydrogenase, d	no	no	0.819	0.982	0.444	1e-112

>sp|Q8W033|AL3I1_ARATH Aldehyde dehydrogenase family 3 member I1, chloroplastic OS=Arabidopsis thaliana GN=ALDH3I1 PE=2 SV=2

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/495 (67%), Positives = 420/495 (84%), Gaps = 1/495 (0%)

Query: 50  CSATMAAEEK-QMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEE 108
           C AT++A  K Q   F  ++AA L+ ELR+N+NS +TKSYEWR+SQ+Q+IA MI+EKE+ 
Sbjct: 55  CYATLSAVVKEQASDFSGKEAALLVDELRSNFNSGRTKSYEWRISQLQNIARMIDEKEKC 114

Query: 109 IIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISE 168
           I EA+++DLSKP  E F++EIS TKSSC LA+KELK W  PE  KTS+TT+PSSA+I+SE
Sbjct: 115 ITEALYQDLSKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSE 174

Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAV 228
           PLGVVLVIS WN+PFLLS++PVIGAIAAGNAVVLKPSEIAPA SSLLAKL  +Y+DN+ +
Sbjct: 175 PLGVVLVISAWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAPAASSLLAKLFSEYLDNTTI 234

Query: 229 RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTI 288
           RV+EG V ET+ALL+QKWDKI +TG  RV RI+MAAAA++LTPV+LELGGK PA+VDS +
Sbjct: 235 RVIEGGVPETTALLDQKWDKIFFTGGARVARIIMAAAARNLTPVVLELGGKCPALVDSDV 294

Query: 289 NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDL 348
           NLQV  RRIIAGKW  N+GQACIGVDY+ITTKDFA KLID+L+ EL+ FFG+N +ESKDL
Sbjct: 295 NLQVAARRIIAGKWACNSGQACIGVDYVITTKDFASKLIDALKTELETFFGQNALESKDL 354

Query: 349 SRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGP 408
           SRIVN FHF RL S+L E+ V++KIV+GG+  E +LKI+PTILLDVP+ S++M+EEIFGP
Sbjct: 355 SRIVNSFHFKRLESMLKENGVANKIVHGGRITEDKLKISPTILLDVPEASSMMQEEIFGP 414

Query: 409 LLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVS 468
           LLPI+TV+KIED F VI+SKPKPLAAY F+++++++K+FVQ++SAGGI  NDT++H TV 
Sbjct: 415 LLPIITVQKIEDGFQVIRSKPKPLAAYLFTNNKELEKQFVQDVSAGGITINDTVLHVTVK 474

Query: 469 SLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNG 528
            LPFGGVGESG+G+YHGKFS++ FSHKK VLYRSF+GD+  RYPPYT +K+ +L+AL + 
Sbjct: 475 DLPFGGVGESGIGAYHGKFSYETFSHKKGVLYRSFSGDADLRYPPYTPKKKMVLKALLSS 534

Query: 529 NIFGLLLALIGWSRD 543
           NIF  +LA  G+S+D
Sbjct: 535 NIFAAILAFFGFSKD 549

Involved in oxidative stress tolerance by detoxifying reactive aldehydes derived from lipid peroxidation.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3

>sp|Q70DU8|AL3H1_ARATH Aldehyde dehydrogenase family 3 member H1 OS=Arabidopsis thaliana GN=ALDH3H1 PE=2 SV=2

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/476 (66%), Positives = 393/476 (82%)

Query: 64  FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFE 123
           F   +A++L+ ELR +++   T+ YEWR++Q++ +  + +  E EI+ A+  DL KP  E
Sbjct: 7   FGSAEASNLVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELE 66

Query: 124 TFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPF 183
           + + E+S+ ++S KLALK+LK W  PEKAKTSLTT+P+SAEI+SEPLGVVLVIS WNYPF
Sbjct: 67  SSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPF 126

Query: 184 LLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLE 243
           LLS+DPVIGAI+AGNAVVLKPSE+APA+S+LL KLLE Y+D SAVRVVEGAV ETSALLE
Sbjct: 127 LLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAVRVVEGAVTETSALLE 186

Query: 244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
           QKWDKI YTGS ++GR++MAAAAKHLTPV+LELGGKSP VVDS  +L+VT RRII GKW 
Sbjct: 187 QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIVGKWG 246

Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
            NNGQAC+  DYI+TTK++APKLID+++ EL++F+GKNP+ESKD+SRIVN  HF RL+ L
Sbjct: 247 CNNGQACVSPDYILTTKEYAPKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLSKL 306

Query: 364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFD 423
           LDE +VSDKIVYGG++D + LKIAPTILLDVP DS IM EEIFGPLLPI+T+  +E+SFD
Sbjct: 307 LDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFD 366

Query: 424 VIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSY 483
           VI+S+PKPLAAY F+ ++++K+ F   +SAGGIV ND  VH  + +LPFGGVGESGMG+Y
Sbjct: 367 VIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAY 426

Query: 484 HGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIG 539
           HGKFSFDAFSHKKAVLYRS  GDS  RYPPY+  K +LL+AL + NIF L   L+G
Sbjct: 427 HGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDLFKVLLG 482

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q8VXQ2|ALDH_CRAPL Aldehyde dehydrogenase OS=Craterostigma plantagineum GN=ALDH PE=1 SV=1

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/481 (62%), Positives = 376/481 (78%), Gaps = 3/481 (0%)

Query: 61  MQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKP 120
           M + D E    ++  LR  Y S KTKSYEWR+SQ++++  +    ++E++EA+  DL KP
Sbjct: 1   MSQVDAE---GVVDGLRRTYISGKTKSYEWRVSQLKALLKITTHHDKEVVEALRADLKKP 57

Query: 121 PFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN 180
             E ++ EI M  ++CK ALKEL  W KP+K KTSL TYPSSAEI+SEPLGVVLVI+ WN
Sbjct: 58  EHEAYVHEIFMVSNACKSALKELHQWMKPQKVKTSLATYPSSAEIVSEPLGVVLVITAWN 117

Query: 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSA 240
           YPFLL+LDP+IGAIAAGN VVLKPSEIAPATS+LLAKLL  YVD SA+RVVEGAV E  A
Sbjct: 118 YPFLLALDPMIGAIAAGNCVVLKPSEIAPATSALLAKLLNQYVDTSAIRVVEGAVPEMQA 177

Query: 241 LLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAG 300
           LL+Q+WDKI YTGS +VG+IV+++AAKHLTPV+LELGGK P VVD+ I+L+V  RRII+ 
Sbjct: 178 LLDQRWDKIFYTGSSKVGQIVLSSAAKHLTPVVLELGGKCPTVVDANIDLKVAARRIISW 237

Query: 301 KWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARL 360
           KW  N+GQ CI  DYIITT++ APKL+D+++ EL+ F+GK+P++S+D+S I+N   F R+
Sbjct: 238 KWSGNSGQTCISPDYIITTEENAPKLVDAIKCELESFYGKDPLKSQDMSSIINERQFERM 297

Query: 361 ASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIED 420
             LLD+ KVSDKIVYGGQ D+  LKIAPTILLDV +DS++M EEIFGPLLPI+TV KIE+
Sbjct: 298 TGLLDDKKVSDKIVYGGQSDKSNLKIAPTILLDVSEDSSVMSEEIFGPLLPIITVGKIEE 357

Query: 421 SFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM 480
            + +I SKPKPLAAY F++D++  +EFV N+SAGGI  ND  +H     LPFGGVGESGM
Sbjct: 358 CYKIIASKPKPLAAYLFTNDKKRTEEFVSNVSAGGITINDIALHFLEPRLPFGGVGESGM 417

Query: 481 GSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIGW 540
           GSYHGKFSFDAFSHKK+VL RSF G+   RYPPY   K   + A+  G+IFGLL A +GW
Sbjct: 418 GSYHGKFSFDAFSHKKSVLKRSFGGEVAARYPPYAPWKLHFMEAILQGDIFGLLKAWLGW 477

Query: 541 S 541
           S
Sbjct: 478 S 478

Oxidizes nonanal, propionaldehyde and acetaldehyde in vitro, in the following decreasing order of reactivity: nonanal, propionaldehyde, acetaldehyde.

Craterostigma plantagineum (taxid: 4153)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q70E96|AL3F1_ARATH Aldehyde dehydrogenase family 3 member F1 OS=Arabidopsis thaliana GN=ALDH3F1 PE=2 SV=2

 Score =  486 bits (1250), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 231/473 (48%), Positives = 318/473 (67%), Gaps = 3/473 (0%)

Query: 73  MKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMT 132
           ++E+R  + S +T+S +WR +QI +I  M+++ E++I  A+ +DL K   E F  E+ + 
Sbjct: 12  LREMRETFASGRTRSLKWRKAQIGAIYEMVKDNEDKICNALFQDLGKHSTEAFRDELGVV 71

Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG 192
             +  +A+  L  W  P+ +K  L  YP+  ++ISEP G VLV+S+WN+P  LSLDP+IG
Sbjct: 72  LRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLVLSSWNFPISLSLDPLIG 131

Query: 193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
           AIAAGN V+LK SE++P  S+ LAK +  Y+D  A++V+EG     + LL+ +WDKI +T
Sbjct: 132 AIAAGNTVLLKSSELSPNASAFLAKTIPAYLDTKAIKVIEGGPDVATILLQHQWDKIFFT 191

Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS-TI--NLQVTTRRIIAGKWMANNGQA 309
           GSP++GRI+MAAAA+HLTPV LELGGK P +VD  TI  N++   +RI  GKW + NGQA
Sbjct: 192 GSPKIGRIIMAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIAGGKWGSCNGQA 251

Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
           CI VDY++  K FAP LID L+  +K FFG+NP ES  LSRI N  H  RL+ LL + +V
Sbjct: 252 CISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQRLSRLLSDPRV 311

Query: 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP 429
              IVYGG  DE +L + PTILLD P DS IM EEIFGP+LPI+TV  I++S  +I +KP
Sbjct: 312 QASIVYGGSIDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITVRDIQESIGIINTKP 371

Query: 430 KPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF 489
           KPLA Y F++DE +K   +   S+G + FND ++     +LPFGGVGESG+G YHGK+SF
Sbjct: 372 KPLAIYAFTNDENLKTRILSETSSGSVTFNDVMIQYMCDALPFGGVGESGIGRYHGKYSF 431

Query: 490 DAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIGWSR 542
           D FSH+KA++  S   D   RYPP+   K   +R  F    F L+L ++G  R
Sbjct: 432 DCFSHEKAIMEGSLGMDLEARYPPWNNFKLTFIRLAFREAYFKLILLMLGLKR 484

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q5XI42|AL3B1_RAT Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus GN=Aldh3b1 PE=2 SV=1

 Score =  422 bits (1086), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/452 (45%), Positives = 299/452 (66%), Gaps = 7/452 (1%)

Query: 73  MKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMT 132
           +++LR  +N+ +T+S E+R +Q+Q +++ + + ++++ EA+ +DL K  FE+ +SEI+++
Sbjct: 8   LQQLREAFNAGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFESEVSEIAIS 67

Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG 192
           ++   LAL+ L+ W K EK   +L T   SA I  EP G+VL+I  WNYP  L+L P++G
Sbjct: 68  QAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPLNLTLVPLVG 127

Query: 193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
           AIAAGN VVLKPSEI+ AT  +LA++L  Y+D S   VV G   ET  LLE ++D I +T
Sbjct: 128 AIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFAVVLGGPQETGQLLEHRFDYIFFT 187

Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
           G+  VG+IVMAAAAKHLTP+ LELGGK+P  VD   + Q    R+   ++  N GQ C+ 
Sbjct: 188 GNTYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQTVANRVAWFRYF-NAGQTCVA 246

Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
            DY++ +++   +L+ +L+N +  F+G NP  S +L RI+N  HF RL  LL       +
Sbjct: 247 PDYVLCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFERLQGLLG----CGR 302

Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 432
           +  GGQ DE +  IAPT+L+DV +   +M+EEIFGP+LP+VTV  ++++ + I  + KPL
Sbjct: 303 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVTNLDEAIEFINRREKPL 362

Query: 433 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
           A Y FS   Q+ K+ +   S+GG   ND  +H T+SSLPFGGVG SGMG YHGKFSFD F
Sbjct: 363 ALYAFSKRSQVIKQVLARTSSGGFCGNDGFMHMTLSSLPFGGVGTSGMGRYHGKFSFDTF 422

Query: 493 SHKKAVLYRSFNGDSTT--RYPPYTAEKQKLL 522
           S+++A L RS   +     RYPPYT+   ++L
Sbjct: 423 SNQRACLLRSPGMEKINDLRYPPYTSRNLRVL 454

Oxidizes medium and long chain saturated and unsaturated aldehydes (By similarity). Metabolizes also benzaldehyde (By similarity). Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde (By similarity). May not metabolize short chain aldehydes (By similarity). May use both NADP(+) and NAD(+) as cofactors (By similarity). May have a protective role against the cytotoxicity induced by lipid peroxidation.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

>sp|Q80VQ0|AL3B1_MOUSE Aldehyde dehydrogenase family 3 member B1 OS=Mus musculus GN=Aldh3b1 PE=2 SV=1

 Score =  419 bits (1078), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/452 (44%), Positives = 297/452 (65%), Gaps = 7/452 (1%)

Query: 73  MKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMT 132
           +++LR  +   +T+S E+R +Q+Q +++ + + ++++ EA+ +DL K  FE  +SEI+++
Sbjct: 8   LQQLREAFKEGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFEAEVSEIAIS 67

Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG 192
           ++   LAL+ L+ W K EK   +L T   SA I  EP G+VL+I  WNYP  L+L P++G
Sbjct: 68  QAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPINLTLVPLVG 127

Query: 193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
           AIAAGN VVLKPSEI+ AT  +LA++L  Y+D S   VV G   ET  LLE K+D I +T
Sbjct: 128 AIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFTVVLGGRQETGQLLEHKFDYIFFT 187

Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
           G+  VG+IVMAAAAKHLTP+ LELGGK+P  VD   + Q+   R+   ++  N GQ C+ 
Sbjct: 188 GNAYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQIVANRVAWFRYF-NAGQTCVA 246

Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
            DYI+ +++   +L+ +L+N +  F+G NP  S +L RI+N  HF RL  LL       +
Sbjct: 247 PDYILCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFKRLQGLLG----CGR 302

Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 432
           +  GGQ DE +  IAPT+L+DV +   +M+EEIFGP+LP+VTV  ++++ + +  + KPL
Sbjct: 303 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVRSLDEAIEFMNRREKPL 362

Query: 433 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
           A Y FS   Q+ K+ +   S+GG   ND  +H T+SSLPFGGVG SGMG YHGKFSFD F
Sbjct: 363 ALYAFSKRSQVIKQVLARTSSGGFCGNDGFMHMTLSSLPFGGVGTSGMGRYHGKFSFDTF 422

Query: 493 SHKKAVLYRSFNGDSTT--RYPPYTAEKQKLL 522
           S+++A L RS   +     RYPPY++   ++L
Sbjct: 423 SNQRACLLRSPGMEKINDLRYPPYSSRNLRVL 454

Oxidizes medium and long chain saturated and unsaturated aldehydes (By similarity). Metabolizes also benzaldehyde (By similarity). Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde (By similarity). May not metabolize short chain aldehydes (By similarity). May use both NADP(+) and NAD(+) as cofactors (By similarity). May have a protective role against the cytotoxicity induced by lipid peroxidation.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

>sp|Q1JPA0|AL3B1_BOVIN Aldehyde dehydrogenase family 3 member B1 OS=Bos taurus GN=ALDH3B1 PE=2 SV=1

 Score =  410 bits (1055), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 204/455 (44%), Positives = 288/455 (63%), Gaps = 7/455 (1%)

Query: 70  ASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEI 129
           A  ++ LR  + S +T+  E+R +Q++ ++  + E ++ + EA+ +DL K  FE  +SEI
Sbjct: 5   ADTLQRLREAFVSGRTRPAEFRDAQLKGLSRFLRENKQLLQEALAQDLHKSAFEAEVSEI 64

Query: 130 SMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDP 189
           S++++   LAL+ L+ W K EK   +L T   SA I  EP G+VL++S WNYP  LSL P
Sbjct: 65  SISQNEINLALRNLRTWMKDEKVSKNLATQLDSAFIRKEPFGLVLILSPWNYPLNLSLGP 124

Query: 190 VIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKI 249
           ++GA+AAGN VVLKPSEI+  T  +LA++L  Y+D S   VV G   ET  LLE K+D I
Sbjct: 125 LVGALAAGNCVVLKPSEISKNTEKVLAEVLPRYLDQSCFAVVLGGPQETGRLLEHKFDYI 184

Query: 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309
            +TG+P+VG+IVM AAAKHLTPV LELGGK+P  VD   + Q    R+   +   N GQ 
Sbjct: 185 FFTGNPQVGKIVMTAAAKHLTPVTLELGGKNPCYVDDNCDPQTVANRVAFFRCF-NAGQT 243

Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
           C+  DY++ + +   +L+ +L++ +  F+G +P  S +L RI++  HF RL  LL     
Sbjct: 244 CVAPDYVLCSPEMQAQLVPALQSAITRFYGDDPQSSPNLGRIISQKHFQRLRGLLS---- 299

Query: 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP 429
             ++V GGQ DE  L IAPT+L+DV +   +M+EEIFGP+LPIV V  +  + D I  + 
Sbjct: 300 CGRVVIGGQSDECDLYIAPTVLVDVQETDPVMQEEIFGPILPIVNVRSLGQAIDFINRRE 359

Query: 430 KPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF 489
           KPLA Y FS+  Q+ K  +   S+GG   ND  +H T++SLPFGGVG SGMG+YHGKFSF
Sbjct: 360 KPLALYAFSNSSQVVKRVLAQTSSGGFCGNDGFMHLTLASLPFGGVGSSGMGNYHGKFSF 419

Query: 490 DAFSHKKAVLYR--SFNGDSTTRYPPYTAEKQKLL 522
           D FSH +A L R          RYPP+T    ++L
Sbjct: 420 DTFSHHRACLLRRPGLEKIYAIRYPPHTPRNLRVL 454

Oxidizes medium and long chain saturated and unsaturated aldehydes (By similarity). Metabolizes also benzaldehyde (By similarity). Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde (By similarity). May not metabolize short chain aldehydes (By similarity). May use both NADP(+) and NAD(+) as cofactors (By similarity). May have a protective role against the cytotoxicity induced by lipid peroxidation.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

>sp|P11883|AL3A1_RAT Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus GN=Aldh3a1 PE=1 SV=3

 Score =  410 bits (1054), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/447 (45%), Positives = 291/447 (65%), Gaps = 7/447 (1%)

Query: 73  MKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMT 132
           +K  R  +NS KT+S ++R+ Q++++  MI E  + I  A+  DL K  + ++  E++  
Sbjct: 8   VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 67

Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG 192
                  +KEL  W + E    +  T      I SEPLGVVLVI  WNYPF L++ P++G
Sbjct: 68  LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 127

Query: 193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
           A+AAGNAV+LKPSE++   + LLA L+  Y+D +   VV+G V ET+ LL++++D I+YT
Sbjct: 128 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 187

Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
           GS  VG+IVMAAAAKHLTPV LELGGKSP  VD   +L V  RRI  GK+M N+GQ C+ 
Sbjct: 188 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM-NSGQTCVA 246

Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
            DYI+       ++++ L+  LK+F+G++  +S+D  RI+N  HF R+  L+D  KV+  
Sbjct: 247 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA-- 304

Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 432
             +GG  D+    IAPTIL+DV   S +M+EEIFGP++PIV V  +E++   I  + KPL
Sbjct: 305 --HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPL 362

Query: 433 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
           A Y FS++E++ K+ +   S+GG+  ND IVH TV +LPFGGVG SGMG+YHGK SF+ F
Sbjct: 363 ALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETF 422

Query: 493 SHKKAVLYRSFNGDST--TRYPPYTAE 517
           SH+++ L +S   +     RYPP  A+
Sbjct: 423 SHRRSCLVKSLLNEEAHKARYPPSPAK 449

ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

>sp|P43353|AL3B1_HUMAN Aldehyde dehydrogenase family 3 member B1 OS=Homo sapiens GN=ALDH3B1 PE=2 SV=1

 Score =  408 bits (1049), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 196/452 (43%), Positives = 291/452 (64%), Gaps = 7/452 (1%)

Query: 73  MKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMT 132
           ++ LR  +++ +T+  E+R +Q+Q +   ++E ++ + +A+ +DL K  FE+ +SE++++
Sbjct: 8   LRRLREAFHAGRTRPAEFRAAQLQGLGRFLQENKQLLHDALAQDLHKSAFESEVSEVAIS 67

Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG 192
           +    LAL+ L+ W K E+   +L T   SA I  EP G+VL+I+ WNYP  L+L P++G
Sbjct: 68  QGEVTLALRNLRAWMKDERVPKNLATQLDSAFIRKEPFGLVLIIAPWNYPLNLTLVPLVG 127

Query: 193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
           A+AAGN VVLKPSEI+     +LA++L  YVD S   VV G   ET  LLE ++D I +T
Sbjct: 128 ALAAGNCVVLKPSEISKNVEKILAEVLPQYVDQSCFAVVLGGPQETGQLLEHRFDYIFFT 187

Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
           GSPRVG+IVM AAAKHLTPV LELGGK+P  VD   + Q    R+   ++  N GQ C+ 
Sbjct: 188 GSPRVGKIVMTAAAKHLTPVTLELGGKNPCYVDDNCDPQTVANRVAWFRYF-NAGQTCVA 246

Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
            DY++ + +   +L+ +L++ +  F+G +P  S +L RI+N   F RL +LL       +
Sbjct: 247 PDYVLCSPEMQERLLPALQSTITRFYGDDPQSSPNLGRIINQKQFQRLRALLG----CGR 302

Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 432
           +  GGQ DE    IAPT+L+DV +   +M+EEIFGP+LPIV V+ ++++ + I  + KPL
Sbjct: 303 VAIGGQSDESDRYIAPTVLVDVQEMEPVMQEEIFGPILPIVNVQSLDEAIEFINRREKPL 362

Query: 433 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
           A Y FS+  Q+ K  +   S+GG   ND  +H T++SLPFGGVG SGMG YHGKFSFD F
Sbjct: 363 ALYAFSNSSQVVKRVLTQTSSGGFCGNDGFMHMTLASLPFGGVGASGMGRYHGKFSFDTF 422

Query: 493 SHKKAVLYRSFNGD--STTRYPPYTAEKQKLL 522
           SH +A L RS   +  +  RYPP +  + ++L
Sbjct: 423 SHHRACLLRSPGMEKLNALRYPPQSPRRLRML 454

Oxidizes medium and long chain saturated and unsaturated aldehydes. Metabolizes also benzaldehyde. Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde. May not metabolize short chain aldehydes. May use both NADP(+) and NAD(+) as cofactors. May have a protective role against the cytotoxicity induced by lipid peroxidation.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

>sp|P30838|AL3A1_HUMAN Aldehyde dehydrogenase, dimeric NADP-preferring OS=Homo sapiens GN=ALDH3A1 PE=1 SV=3

 Score =  407 bits (1045), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/452 (44%), Positives = 291/452 (64%), Gaps = 7/452 (1%)

Query: 68  KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFIS 127
           K +  +K  R  ++S +T+  ++R+ Q++++  +I+E+E+E++ A+  DL K  +  +  
Sbjct: 3   KISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYE 62

Query: 128 EISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSL 187
           E+       +  +++L  W   E  + +  T      I SEPLGVVLVI TWNYPF L++
Sbjct: 63  EVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTI 122

Query: 188 DPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWD 247
            P++GAIAAGN+VVLKPSE++   +SLLA ++  Y+D     V+ G V ET+ LL++++D
Sbjct: 123 QPMVGAIAAGNSVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFD 182

Query: 248 KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNG 307
            ILYTGS  VG+I+M AAAKHLTPV LELGGKSP  VD   +L V  RRI  GK+M N+G
Sbjct: 183 HILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFM-NSG 241

Query: 308 QACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDED 367
           Q C+  DYI+       ++++ L+  LKEF+G++  +S+D  RI++  HF R+  L++  
Sbjct: 242 QTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQ 301

Query: 368 KVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKS 427
           KV+    YGG  D     IAPTIL DV   S +M+EEIFGP+LPIV V  +E++   I  
Sbjct: 302 KVA----YGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQ 357

Query: 428 KPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF 487
           + KPLA Y FS ++++ K+ +   S+GG+  ND IVH T+ SLPFGGVG SGMGSYHGK 
Sbjct: 358 REKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKK 417

Query: 488 SFDAFSHKKAVLYRSFNGDS--TTRYPPYTAE 517
           SF+ FSH+++ L R    D     RYPP  A+
Sbjct: 418 SFETFSHRRSCLVRPLMNDEGLKVRYPPSPAK 449

ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	543
359480760	549	PREDICTED: aldehyde dehydrogenase family	0.924	0.914	0.750	0.0
296082609	548	unnamed protein product [Vitis vinifera]	0.924	0.916	0.750	0.0
224083522	488	predicted protein [Populus trichocarpa]	0.895	0.995	0.724	0.0
356526936	541	PREDICTED: aldehyde dehydrogenase family	0.941	0.944	0.688	0.0
357520121	550	Aldehyde dehydrogenase family 3 member H	0.963	0.950	0.657	0.0
147771560	541	hypothetical protein VITISV_044129 [Viti	0.909	0.913	0.722	0.0
224082306	488	predicted protein [Populus trichocarpa]	0.898	1.0	0.694	0.0
312281945	547	unnamed protein product [Thellungiella h	0.909	0.903	0.680	0.0
357463521	495	Aldehyde dehydrogenase family 3 member H	0.898	0.985	0.670	0.0
83701643	555	putative aldehyde dehydrogenase [Brassic	0.913	0.893	0.666	0.0

>gi|359480760|ref|XP_002273730.2| PREDICTED: aldehyde dehydrogenase family 3 member I1, chloroplastic-like [Vitis vinifera]

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/505 (75%), Positives = 443/505 (87%), Gaps = 3/505 (0%)

Query: 41  LSLTSFSCRCSATMA--AEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98
           L  T  S  CSAT+A  A+EK+ + FDVE AASL+KELR ++N+ KTKSYEWR++Q++ I
Sbjct: 46  LRFTHSSFICSATLAVMADEKK-KVFDVESAASLVKELRGSFNAGKTKSYEWRIAQLKGI 104

Query: 99  ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTT 158
             MI+E+E++IIEA+H+DLSKP  E F+SEISM+K +CKLALKEL +W KPEKAKTS+TT
Sbjct: 105 EKMIDEREKDIIEALHEDLSKPELEAFVSEISMSKGACKLALKELGHWMKPEKAKTSMTT 164

Query: 159 YPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL 218
           YPSSAEI+SEPLGVVLVISTWNYP LLS+DPVIGAIAAGNAVVLKPSEIAPATS+LL+KL
Sbjct: 165 YPSSAEIVSEPLGVVLVISTWNYPLLLSIDPVIGAIAAGNAVVLKPSEIAPATSTLLSKL 224

Query: 219 LEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 278
           LE+Y+DNS++RVVEGAVAET+ALLEQKWDKI YTGSPRVGRIVMAAAAKHLTPV LELGG
Sbjct: 225 LEEYLDNSSIRVVEGAVAETTALLEQKWDKIFYTGSPRVGRIVMAAAAKHLTPVTLELGG 284

Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
           K P VVDS +NLQV  RR+IAGKW  NNGQACI  DYIITTKDFAPKLID LR+EL+EFF
Sbjct: 285 KCPVVVDSNVNLQVAARRLIAGKWACNNGQACISPDYIITTKDFAPKLIDVLRHELEEFF 344

Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDS 398
           GKNP+ES+D+SRIV+  HF RL  LLDED+VSDKI+ GGQ DE QLKIAPTIL+DVP+D+
Sbjct: 345 GKNPIESEDMSRIVSVQHFKRLTRLLDEDEVSDKIIIGGQSDENQLKIAPTILVDVPEDT 404

Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVF 458
            IMKEEIFGPLLPI+TVE +E+SFDVI SK KPLAAY FS+++Q++K+FV NISAGG++ 
Sbjct: 405 EIMKEEIFGPLLPILTVENLEESFDVINSKSKPLAAYLFSENKQLQKDFVNNISAGGMLI 464

Query: 459 NDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEK 518
           NDTI+H TVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR F G+S  RYPPYT  K
Sbjct: 465 NDTILHLTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRGFTGESPARYPPYTPGK 524

Query: 519 QKLLRALFNGNIFGLLLALIGWSRD 543
            KLL+ L +GNI  +LLAL+G+S+D
Sbjct: 525 LKLLKTLTSGNIVSILLALLGFSKD 549

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082609|emb|CBI21614.3| unnamed protein product [Vitis vinifera]

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/505 (75%), Positives = 443/505 (87%), Gaps = 3/505 (0%)

Query: 41  LSLTSFSCRCSATMA--AEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98
           L  T  S  CSAT+A  A+EK+ + FDVE AASL+KELR ++N+ KTKSYEWR++Q++ I
Sbjct: 45  LRFTHSSFICSATLAVMADEKK-KVFDVESAASLVKELRGSFNAGKTKSYEWRIAQLKGI 103

Query: 99  ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTT 158
             MI+E+E++IIEA+H+DLSKP  E F+SEISM+K +CKLALKEL +W KPEKAKTS+TT
Sbjct: 104 EKMIDEREKDIIEALHEDLSKPELEAFVSEISMSKGACKLALKELGHWMKPEKAKTSMTT 163

Query: 159 YPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL 218
           YPSSAEI+SEPLGVVLVISTWNYP LLS+DPVIGAIAAGNAVVLKPSEIAPATS+LL+KL
Sbjct: 164 YPSSAEIVSEPLGVVLVISTWNYPLLLSIDPVIGAIAAGNAVVLKPSEIAPATSTLLSKL 223

Query: 219 LEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 278
           LE+Y+DNS++RVVEGAVAET+ALLEQKWDKI YTGSPRVGRIVMAAAAKHLTPV LELGG
Sbjct: 224 LEEYLDNSSIRVVEGAVAETTALLEQKWDKIFYTGSPRVGRIVMAAAAKHLTPVTLELGG 283

Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
           K P VVDS +NLQV  RR+IAGKW  NNGQACI  DYIITTKDFAPKLID LR+EL+EFF
Sbjct: 284 KCPVVVDSNVNLQVAARRLIAGKWACNNGQACISPDYIITTKDFAPKLIDVLRHELEEFF 343

Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDS 398
           GKNP+ES+D+SRIV+  HF RL  LLDED+VSDKI+ GGQ DE QLKIAPTIL+DVP+D+
Sbjct: 344 GKNPIESEDMSRIVSVQHFKRLTRLLDEDEVSDKIIIGGQSDENQLKIAPTILVDVPEDT 403

Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVF 458
            IMKEEIFGPLLPI+TVE +E+SFDVI SK KPLAAY FS+++Q++K+FV NISAGG++ 
Sbjct: 404 EIMKEEIFGPLLPILTVENLEESFDVINSKSKPLAAYLFSENKQLQKDFVNNISAGGMLI 463

Query: 459 NDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEK 518
           NDTI+H TVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR F G+S  RYPPYT  K
Sbjct: 464 NDTILHLTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRGFTGESPARYPPYTPGK 523

Query: 519 QKLLRALFNGNIFGLLLALIGWSRD 543
            KLL+ L +GNI  +LLAL+G+S+D
Sbjct: 524 LKLLKTLTSGNIVSILLALLGFSKD 548

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083522|ref|XP_002307060.1| predicted protein [Populus trichocarpa] gi|222856509|gb|EEE94056.1| predicted protein [Populus trichocarpa]

 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/486 (72%), Positives = 423/486 (87%)

Query: 58  EKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDL 117
           E + Q FD  +A SL+KEL+ ++ + +T+SYEWR+SQ++ I  M+EE+E++I EA++KDL
Sbjct: 3   EGKKQPFDANEAPSLVKELKESFRTGRTRSYEWRVSQLKGIEKMVEEREKDISEALYKDL 62

Query: 118 SKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177
           SKP FE F+SEI+  KSSC+ ALKELK W KPEKAKTS+T YPSSAEI+SEPLG VLVIS
Sbjct: 63  SKPEFEAFVSEIAAVKSSCEEALKELKQWMKPEKAKTSMTAYPSSAEIVSEPLGAVLVIS 122

Query: 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAE 237
           TWNYPFLLS+DPVIGAIAAGNAVVLKPSEIAP TSSLL++L E+Y+D+SAVRVVEGAV E
Sbjct: 123 TWNYPFLLSIDPVIGAIAAGNAVVLKPSEIAPVTSSLLSELFEEYLDSSAVRVVEGAVPE 182

Query: 238 TSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRI 297
           T+ALLEQKWDKI YTGSPRVGRIVM AAAKHLTPV+LELGGK P VVDS ++LQVT RRI
Sbjct: 183 TAALLEQKWDKIFYTGSPRVGRIVMTAAAKHLTPVVLELGGKCPVVVDSDVDLQVTARRI 242

Query: 298 IAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHF 357
           IAGKW  NNGQACI VDYII TKDFAPKLID+LRN ++EFFG +PMESK +SRIV+  HF
Sbjct: 243 IAGKWQLNNGQACISVDYIIATKDFAPKLIDALRNGIEEFFGADPMESKYISRIVSSNHF 302

Query: 358 ARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEK 417
           +RL  LLDE KV +KIV GGQR++K+LKIAPTI LDVP+DS +M+EEIFGPLLPI+TVE 
Sbjct: 303 SRLERLLDEYKVFNKIVVGGQRNQKKLKIAPTIFLDVPEDSQLMQEEIFGPLLPIITVEN 362

Query: 418 IEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGE 477
           ++DS D+I SKP+PL AY F+++++++ +FVQN+S GG+V NDT++H TVSSLPFGGVGE
Sbjct: 363 VKDSIDLINSKPEPLVAYLFTNNQKLRNDFVQNVSCGGMVINDTVLHVTVSSLPFGGVGE 422

Query: 478 SGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLAL 537
           SGMGSYHGKFSFDAFSHKKAVLYRSF+GDS  RYPPYT E +KL+RA+ NG IF ++LAL
Sbjct: 423 SGMGSYHGKFSFDAFSHKKAVLYRSFSGDSPVRYPPYTPENKKLMRAVMNGGIFDIILAL 482

Query: 538 IGWSRD 543
           +GWSRD
Sbjct: 483 MGWSRD 488

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526936|ref|XP_003532071.1| PREDICTED: aldehyde dehydrogenase family 3 member I1, chloroplastic-like [Glycine max]

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/511 (68%), Positives = 432/511 (84%)

Query: 31  KNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEW 90
           + Q H     ++ +SF C  + ++  E ++ Q FD EKA  L+K+LR +++S  TKSY W
Sbjct: 31  QKQLHFHSRCVAFSSFICSATISVMPELEEKQVFDGEKANLLVKDLRKSFDSGMTKSYGW 90

Query: 91  RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
           R+SQ+++IA M+EEKE+EI EA++KDL KP  E FI+EIS  KSSC  ALKELK W KPE
Sbjct: 91  RVSQLEAIAKMLEEKEKEITEALYKDLGKPRLEAFITEISQAKSSCSEALKELKEWMKPE 150

Query: 151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPA 210
           K  TS+TTYPSSAEI+ EPLGVVLVISTWN+PFLLS+DPVIGAI+AGNAVVLKPSEI+PA
Sbjct: 151 KVNTSITTYPSSAEIVPEPLGVVLVISTWNFPFLLSMDPVIGAISAGNAVVLKPSEISPA 210

Query: 211 TSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLT 270
           TSSLLA L+E Y+DNS +RVVEGA+ ETSALL+QKWDKILYTGS RVGRIVMAAAAKHLT
Sbjct: 211 TSSLLANLIEQYLDNSTIRVVEGAIPETSALLDQKWDKILYTGSARVGRIVMAAAAKHLT 270

Query: 271 PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330
           PVILELGGK PAVV+S +NLQVT RRIIAGKW  N+GQACI VDYIIT K+FAPKL+D+L
Sbjct: 271 PVILELGGKCPAVVESDVNLQVTARRIIAGKWACNSGQACISVDYIITRKEFAPKLVDAL 330

Query: 331 RNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTI 390
           + EL++FFGK+PMESKD+SRIV+P  FARL +LLDEDKVSDKIV GGQRDEK+LKIAPTI
Sbjct: 331 KEELEQFFGKDPMESKDMSRIVSPNQFARLVNLLDEDKVSDKIVLGGQRDEKKLKIAPTI 390

Query: 391 LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQN 450
           +L VP+D+ IM+EEIFGP++PIVTV+ IED + +IKSKPKPLAAY F+++EQ+KK++V  
Sbjct: 391 ILGVPEDAMIMQEEIFGPIMPIVTVDNIEDCYSIIKSKPKPLAAYLFTNNEQLKKDYVDK 450

Query: 451 ISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTR 510
           IS+GG++ ND ++H     LPFGGV ESGMG YHGKFSFD+FSH+K+VLYRSF+ DST R
Sbjct: 451 ISSGGMLINDAVIHVATRGLPFGGVEESGMGCYHGKFSFDSFSHRKSVLYRSFDADSTIR 510

Query: 511 YPPYTAEKQKLLRALFNGNIFGLLLALIGWS 541
           YPPYT +K+KLL+AL +GNI  ++L+L+GWS
Sbjct: 511 YPPYTPQKEKLLKALISGNIVQIILSLLGWS 541

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520121|ref|XP_003630349.1| Aldehyde dehydrogenase family 3 member H1 [Medicago truncatula] gi|355524371|gb|AET04825.1| Aldehyde dehydrogenase family 3 member H1 [Medicago truncatula]

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/532 (65%), Positives = 435/532 (81%), Gaps = 9/532 (1%)

Query: 20  NKSFIYNYTYR--KNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELR 77
            + F  N T +    Q H +   +   S  C  + ++ +E ++ Q FD EKA  L++ELR
Sbjct: 18  GRDFANNLTTKCFPKQLHFNSRSVVFASHLCYATLSVESEAEKKQVFDGEKAYLLVRELR 77

Query: 78  NNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCK 137
            N+++ KTKSYEWR+SQ+++I  M+EEKE+EII+A+H DLSKP  E +I+EI   KSSC 
Sbjct: 78  KNFDTGKTKSYEWRISQLEAIVKMLEEKEKEIIDALHTDLSKPRLEAYITEIVQAKSSCD 137

Query: 138 LALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAG 197
            AL+ELK+W KPEK  TS+T +PSSAEI+SEPLGVVL+ISTWN+P LLSLDPVIGAI+AG
Sbjct: 138 EALQELKHWMKPEKVSTSITAFPSSAEIVSEPLGVVLIISTWNFPMLLSLDPVIGAISAG 197

Query: 198 NAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRV 257
           NAVVLKPSE++PATSSLLA LLE Y+DNSAVRVVEGAV ET+ALL+QKWDKILYTGS RV
Sbjct: 198 NAVVLKPSEVSPATSSLLANLLESYLDNSAVRVVEGAVPETTALLDQKWDKILYTGSARV 257

Query: 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317
           GRIVMAAAAKHLTPVILELGGK PAVVDS +NLQ T RRIIAGKW  N+GQ CI VDYII
Sbjct: 258 GRIVMAAAAKHLTPVILELGGKCPAVVDSNVNLQFTARRIIAGKWACNSGQTCISVDYII 317

Query: 318 TTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGG 377
           TTKDFAP L+D+L+ EL++FFGK+ +ESKD+SRIV+P  +ARL  LLDEDKVSDKIV GG
Sbjct: 318 TTKDFAPTLVDALKEELEQFFGKDLIESKDMSRIVSPTQYARLVKLLDEDKVSDKIVLGG 377

Query: 378 QRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVT-------VEKIEDSFDVIKSKPK 430
           QRDEK+LKIAPTILLDVP ++ +M+EEIFGP+LPI+T       V+ IEDSF +I+S+PK
Sbjct: 378 QRDEKKLKIAPTILLDVPQEAMVMQEEIFGPILPIITVSTIKGKVDSIEDSFSIIQSRPK 437

Query: 431 PLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFD 490
           PLAAY F+++EQ+KK++V  IS+GG++ ND ++H     LPFGGVGESGMG YHGKFSFD
Sbjct: 438 PLAAYLFTNNEQLKKDYVDKISSGGMLINDAVIHVATRGLPFGGVGESGMGCYHGKFSFD 497

Query: 491 AFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIGWSR 542
           +FSHKK+VLY++F+ D + RYPPYT EK+ +LRA+F GNIF ++LAL+GWS+
Sbjct: 498 SFSHKKSVLYKTFDSDPSIRYPPYTPEKENILRAIFGGNIFQIILALLGWSK 549

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147771560|emb|CAN73659.1| hypothetical protein VITISV_044129 [Vitis vinifera]

 Score =  744 bits (1920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/505 (72%), Positives = 429/505 (84%), Gaps = 11/505 (2%)

Query: 41  LSLTSFSCRCSATMA--AEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98
           L  T  S  CSAT+A  A+EK+ + FDVE AASL+KELR ++N+ KTKSYEWR++Q++ I
Sbjct: 46  LRFTHSSFICSATLAVMADEKK-KVFDVESAASLVKELRGSFNAGKTKSYEWRIAQLKGI 104

Query: 99  ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTT 158
             MI+E+E++IIEA+H+DLSKP  E F+SEISM+K +CKLALKEL +W KPEKAKTS+TT
Sbjct: 105 EKMIDEREKDIIEALHEDLSKPELEAFVSEISMSKGACKLALKELGHWMKPEKAKTSMTT 164

Query: 159 YPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL 218
           YPSSAEI+SEPLGVVLVISTWNYP LLS+DPVIGAIAAGNAVVLKPSEIAPATS+LL+KL
Sbjct: 165 YPSSAEIVSEPLGVVLVISTWNYPLLLSIDPVIGAIAAGNAVVLKPSEIAPATSTLLSKL 224

Query: 219 LEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 278
           LE+Y+DNS++RVVEGAVAET+ALLEQKWDKI YTGSPRVGRIVMAAAAKHLTPV LELGG
Sbjct: 225 LEEYLDNSSIRVVEGAVAETTALLEQKWDKIFYTGSPRVGRIVMAAAAKHLTPVTLELGG 284

Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
           K P VVDS +NLQ     I          +     DYIITTKDFAPKLID LR+EL+EFF
Sbjct: 285 KCPVVVDSNVNLQXXGHAI--------XDKLAFLPDYIITTKDFAPKLIDVLRHELEEFF 336

Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDS 398
           GKNP+ES+D+SRIV+  HF RL  LLDED+VSDKI+ GGQ DE QLKIAPTIL+DVP+D+
Sbjct: 337 GKNPIESEDMSRIVSVQHFKRLTRLLDEDEVSDKIIIGGQSDENQLKIAPTILVDVPEDT 396

Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVF 458
            IMKEEIFGPLLPI+TVE +E+SFDVI SK KPLAAY FS+++Q++K+FV NISAGG++ 
Sbjct: 397 EIMKEEIFGPLLPILTVENLEESFDVINSKSKPLAAYLFSENKQLQKDFVNNISAGGMLI 456

Query: 459 NDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEK 518
           NDTI+H TVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR F G+S  RYPPYT  K
Sbjct: 457 NDTILHLTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRGFTGESPARYPPYTPGK 516

Query: 519 QKLLRALFNGNIFGLLLALIGWSRD 543
            KLL+ L +GNI  +LLAL+G+S+D
Sbjct: 517 LKLLKTLTSGNIVSILLALLGFSKD 541

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082306|ref|XP_002306641.1| predicted protein [Populus trichocarpa] gi|222856090|gb|EEE93637.1| predicted protein [Populus trichocarpa]

 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/488 (69%), Positives = 415/488 (85%)

Query: 54  MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAI 113
           MA +E++   FDVE A  L KELR+ + S KT+SYEWR+SQ++SI  M +E EE+I++A+
Sbjct: 1   MATKEEENTVFDVEAANVLTKELRDVFASGKTRSYEWRISQLKSIVKMCDEHEEDIVDAL 60

Query: 114 HKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV 173
            +DLSKP  E+ + E++M K+SC LA+KELK+W  PEKAKTSLTT+PSSAEI+SEPLG V
Sbjct: 61  RQDLSKPQLESIVYELTMVKNSCTLAIKELKHWMMPEKAKTSLTTFPSSAEIVSEPLGAV 120

Query: 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG 233
           L+IS WNYPFLLS+DP+IGAIAAGNA+VLKPSE+APATSSLLAKLL +Y+D S+++VVEG
Sbjct: 121 LIISAWNYPFLLSMDPLIGAIAAGNAMVLKPSEVAPATSSLLAKLLPEYLDCSSIKVVEG 180

Query: 234 AVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVT 293
           AV+ETSALLEQKWDKI YTG+ RVGRIVMAAAAKHLTPV+LELGGKSP VVDS I++Q+ 
Sbjct: 181 AVSETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSGIDIQIA 240

Query: 294 TRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVN 353
           TRRII GKW  NNGQACI  DYIITTKD A KL+DSL+ EL+ F+GKNP+ESKDLSRIVN
Sbjct: 241 TRRIIVGKWGCNNGQACISPDYIITTKDCAEKLVDSLKKELEAFYGKNPLESKDLSRIVN 300

Query: 354 PFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413
             HF+RL  LLDEDKVS KIVYGG+RDE  L+IAPTILL VP +S IMKEEIFGPLLPI+
Sbjct: 301 SNHFSRLTKLLDEDKVSGKIVYGGERDEANLRIAPTILLGVPQNSLIMKEEIFGPLLPIL 360

Query: 414 TVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFG 473
           TV KIEDSFD+IKS  KPLAAY F++++++K++F+ ++SAGG+V NDT +H  V S+PFG
Sbjct: 361 TVSKIEDSFDIIKSGTKPLAAYLFTNNKKLKEQFLMSVSAGGVVINDTTLHLAVHSVPFG 420

Query: 474 GVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGL 533
           GVGESGMGSYHGKFSFDAF+HKKAV+YRSF GD++ RYPPYT  K +L++AL  GN++ +
Sbjct: 421 GVGESGMGSYHGKFSFDAFTHKKAVVYRSFVGDASVRYPPYTLGKLRLMKALITGNVWTI 480

Query: 534 LLALIGWS 541
           L  L+G S
Sbjct: 481 LRTLLGMS 488

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312281945|dbj|BAJ33838.1| unnamed protein product [Thellungiella halophila]

 Score =  723 bits (1865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/495 (68%), Positives = 418/495 (84%), Gaps = 1/495 (0%)

Query: 50  CSATMAAE-EKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEE 108
           C AT++A   KQ   FD ++AA L++ELR N+N+ +TKSYEWR+SQ+Q+I+ MI+EKE  
Sbjct: 52  CYATLSAVVTKQTPAFDGKEAALLVEELRINFNTGRTKSYEWRISQLQNISRMIDEKERS 111

Query: 109 IIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISE 168
           I EA+H+DLSKP  E F++EIS TKSSC LA+KELK W  PE  KTS+TT+PSSA+I+SE
Sbjct: 112 IAEALHQDLSKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSE 171

Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAV 228
           PLGVVLVIS WN+PFLLS++PVIGAIAAGNAVVLKPSEIAPATSSLLAKL  +Y+D S +
Sbjct: 172 PLGVVLVISAWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAPATSSLLAKLFSEYLDESTI 231

Query: 229 RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTI 288
           RV+EG V ET+ALL+QKWDKI +TG  RVGRIVMAAAA++LTPV+LELGGK PA+VDS +
Sbjct: 232 RVIEGGVPETTALLDQKWDKIFFTGGARVGRIVMAAAARNLTPVVLELGGKCPALVDSDV 291

Query: 289 NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDL 348
           NLQV  RRII+GKW  NNGQACIGVDY+ITTKDFA KLID+L+ ELK FFG+NP+ESKDL
Sbjct: 292 NLQVVARRIISGKWACNNGQACIGVDYVITTKDFASKLIDALKTELKTFFGENPLESKDL 351

Query: 349 SRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGP 408
           SRIVN FHF RL S+L E+ ++DKIV GGQ  E +LKI+PTILLDVP+  ++M+EEIFGP
Sbjct: 352 SRIVNSFHFKRLESMLKENGMADKIVKGGQTSEDKLKISPTILLDVPEACSMMQEEIFGP 411

Query: 409 LLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVS 468
           LLPI+TV+KIED F VI+SK KPLAAY F+D+++++K+FVQ+++AGGI  NDT++H TV 
Sbjct: 412 LLPIITVQKIEDGFQVIRSKAKPLAAYLFTDNKELQKKFVQDVAAGGIGINDTVLHVTVK 471

Query: 469 SLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNG 528
            LPFGGVGESG+G+YHGKFS++ FSHKK VLYRSF GDS  RYPPYT +K+ +L+AL + 
Sbjct: 472 DLPFGGVGESGIGAYHGKFSYETFSHKKGVLYRSFAGDSDLRYPPYTPKKKMVLKALLSS 531

Query: 529 NIFGLLLALIGWSRD 543
           NIF  +LA  G+S+D
Sbjct: 532 NIFAAILAFFGFSQD 546

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357463521|ref|XP_003602042.1| Aldehyde dehydrogenase family 3 member H1 [Medicago truncatula] gi|355491090|gb|AES72293.1| Aldehyde dehydrogenase family 3 member H1 [Medicago truncatula]

 Score =  716 bits (1848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/495 (67%), Positives = 418/495 (84%), Gaps = 7/495 (1%)

Query: 54  MAAEEKQMQR--FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIE 111
           M+ E+   ++  FD E A+SL+KELR +++S KT+SYEWR+SQ++++  M++E++++II+
Sbjct: 1   MSGEDHSQKKVMFDGEAASSLVKELRVSFSSGKTRSYEWRISQVKALLKMVDEQQDQIID 60

Query: 112 AIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLG 171
           A+  DL+KPP ET + EI M K+SC++ LKELK W  PEKAKTS+TT+PSSAEI+ EPLG
Sbjct: 61  ALRSDLAKPPLETVVYEIGMFKNSCEVTLKELKQWMAPEKAKTSVTTFPSSAEIVPEPLG 120

Query: 172 VVLVISTWNYPF-----LLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNS 226
           VVLVIS WNYPF     +LSLDPV+GAIAAGNAVVLKPSEIAPA+SSLLA LL  Y+DNS
Sbjct: 121 VVLVISAWNYPFRKSTFVLSLDPVVGAIAAGNAVVLKPSEIAPASSSLLANLLGRYMDNS 180

Query: 227 AVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286
           +VRVVEGAV ET+ALL+QKWDKI YTG+ +VGRIVMAAAAKHLTPV+LELGGKSP VVDS
Sbjct: 181 SVRVVEGAVDETTALLQQKWDKIFYTGNGKVGRIVMAAAAKHLTPVVLELGGKSPTVVDS 240

Query: 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK 346
            +NL+VT RRII+GKW  NNGQACI  DY+ITTKDFAPKL+D+L+ EL+ FFGKNP+ES 
Sbjct: 241 NVNLEVTARRIISGKWCCNNGQACISPDYVITTKDFAPKLVDALKKELESFFGKNPIESN 300

Query: 347 DLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIF 406
           DLSRIV+  HFARL  +LD+DKVS KIVYGG++DE +L+IAPTI+LD P DS IM EEIF
Sbjct: 301 DLSRIVSSNHFARLIKMLDDDKVSGKIVYGGEKDESKLRIAPTIVLDAPQDSLIMSEEIF 360

Query: 407 GPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTT 466
           GPLLPI+TV K+E+SFDVI +  KPLAAY F++D + K++FV+N+SAGG++ NDT++H  
Sbjct: 361 GPLLPIITVNKLEESFDVINAGTKPLAAYLFTNDNKFKEQFVKNVSAGGLLINDTVLHLV 420

Query: 467 VSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALF 526
           V +LPFGGVG+SGMG+YHGKFSFDAF+H+KAVLYR F GD++ RYPPYT  KQKL++AL 
Sbjct: 421 VHTLPFGGVGDSGMGAYHGKFSFDAFTHRKAVLYRGFTGDASIRYPPYTDTKQKLMKALV 480

Query: 527 NGNIFGLLLALIGWS 541
            G++ G++ AL GWS
Sbjct: 481 AGDVTGVVRALFGWS 495

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|83701643|gb|ABC41273.1| putative aldehyde dehydrogenase [Brassica rapa]

 Score =  714 bits (1842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/498 (66%), Positives = 421/498 (84%), Gaps = 2/498 (0%)

Query: 47  SCRCSATMAAEEK-QMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEK 105
           S  C AT++A  K Q   FD ++AA L+ ELR N+N+ +T+SYEWR+SQ+Q+IA MI+EK
Sbjct: 58  SSTCYATLSAVVKPQESAFDGKEAALLVDELRTNFNTGRTRSYEWRISQLQNIAKMIDEK 117

Query: 106 EEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEI 165
           E+ I EA+++DLSKP  E F++E+S TKSSC LA+KELK W  PE  KTS+TT+PSSA+I
Sbjct: 118 EKCITEALYQDLSKPELEAFLAELSNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQI 177

Query: 166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDN 225
           +SEPLGVVLVIS WN+PFLLS++PVIGAI+AGNAVVLKPSEIAPATSSLLAKL  +Y+D 
Sbjct: 178 VSEPLGVVLVISAWNFPFLLSVEPVIGAISAGNAVVLKPSEIAPATSSLLAKLFSEYLDE 237

Query: 226 SAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
           +A+RVVEG V  T ALL+QKWDKI +TG  RVGRIVMAAAAK+LTPV+LELGGK PA+VD
Sbjct: 238 TAIRVVEGGVLNT-ALLDQKWDKIFFTGGARVGRIVMAAAAKNLTPVVLELGGKCPALVD 296

Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMES 345
           S +NLQV  RRII GKW  NNGQACIGVDY+ITTKDFAPKLID+L+ ELK FFG+NP++S
Sbjct: 297 SDVNLQVAARRIITGKWACNNGQACIGVDYVITTKDFAPKLIDALKTELKTFFGENPLKS 356

Query: 346 KDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEI 405
           KD+SRIVN FHF RL S++ E+ V++KIV+GGQ  E +LKI+PTIL+DVP++S++M+EEI
Sbjct: 357 KDVSRIVNSFHFKRLESMMKENGVANKIVHGGQTMEDKLKISPTILVDVPEESSMMQEEI 416

Query: 406 FGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHT 465
           FGPLLP++TV KIED F VI+SKPKPLAAY F+D++ ++  FV+N+SAGG+  N+T++H 
Sbjct: 417 FGPLLPVITVSKIEDGFQVIRSKPKPLAAYLFTDNKVLQNRFVENVSAGGMGINETVLHV 476

Query: 466 TVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRAL 525
           T+  LPFGGVGESG+G+YHGKFS++ FSHKK VLYRSF+GDS  RYPPYT EK+++L+AL
Sbjct: 477 TLKDLPFGGVGESGIGAYHGKFSYETFSHKKGVLYRSFDGDSDLRYPPYTPEKKRVLKAL 536

Query: 526 FNGNIFGLLLALIGWSRD 543
            + +IFG +LA  G+S+D
Sbjct: 537 LSSDIFGAILAFFGFSKD 554

Source: Brassica rapa

Species: Brassica rapa

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	543
TAIR|locus:2116134	550	ALDH3I1 "AT4G34240" [Arabidops	0.909	0.898	0.632	2.7e-171
TAIR|locus:2205851	484	ALDH3H1 "AT1G44170" [Arabidops	0.876	0.983	0.630	1.7e-162
TAIR|locus:2122224	484	ALDH3F1 "AT4G36250" [Arabidops	0.876	0.983	0.459	4.5e-114
RGD|2088	453	Aldh3a1 "aldehyde dehydrogenas	0.810	0.971	0.427	3.7e-96
RGD|1359546	468	Aldh3b1 "aldehyde dehydrogenas	0.819	0.950	0.426	9.7e-96
UNIPROTKB|Q5XI42	468	Aldh3b1 "Aldehyde dehydrogenas	0.819	0.950	0.426	9.7e-96
UNIPROTKB|E2RPP8	599	ALDH3A2 "Uncharacterized prote	0.878	0.796	0.402	2e-95
MGI|MGI:1914939	468	Aldh3b1 "aldehyde dehydrogenas	0.819	0.950	0.424	6.8e-95
UNIPROTKB|D4A137	507	Aldh3a2 "Aldehyde dehydrogenas	0.848	0.909	0.412	1.4e-94
RGD|61866	484	Aldh3a2 "aldehyde dehydrogenas	0.848	0.952	0.412	2.3e-94

TAIR|locus:2116134 ALDH3I1 "AT4G34240" [Arabidopsis thaliana (taxid:3702)]

 Score = 1665 (591.2 bits), Expect = 2.7e-171, P = 2.7e-171
 Identities = 313/495 (63%), Positives = 398/495 (80%)

Query:    50 CSATMAAEEK-QMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXX 108
             C AT++A  K Q   F  ++AA L+ ELR+N+NS +TKSYEWR+SQ+Q+IA M       
Sbjct:    55 CYATLSAVVKEQASDFSGKEAALLVDELRSNFNSGRTKSYEWRISQLQNIARMIDEKEKC 114

Query:   109 XXXXXHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISE 168
                  ++DLSKP  E F++EIS TKSSC LA+KELK W  PE  KTS+TT+PSSA+I+SE
Sbjct:   115 ITEALYQDLSKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSE 174

Query:   169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAV 228
             PLGVVLVIS WN+PFLLS++P            LKPSEIAPA SSLLAKL  +Y+DN+ +
Sbjct:   175 PLGVVLVISAWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAPAASSLLAKLFSEYLDNTTI 234

Query:   229 RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTI 288
             RV+EG V ET+ALL+QKWDKI +TG  RV RI+MAAAA++LTPV+LELGGK PA+VDS +
Sbjct:   235 RVIEGGVPETTALLDQKWDKIFFTGGARVARIIMAAAARNLTPVVLELGGKCPALVDSDV 294

Query:   289 NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDL 348
             NLQV  RRIIAGKW  N+GQACIGVDY+ITTKDFA KLID+L+ EL+ FFG+N +ESKDL
Sbjct:   295 NLQVAARRIIAGKWACNSGQACIGVDYVITTKDFASKLIDALKTELETFFGQNALESKDL 354

Query:   349 SRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGP 408
             SRIVN FHF RL S+L E+ V++KIV+GG+  E +LKI+PTILLDVP+ S++M+EEIFGP
Sbjct:   355 SRIVNSFHFKRLESMLKENGVANKIVHGGRITEDKLKISPTILLDVPEASSMMQEEIFGP 414

Query:   409 LLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVS 468
             LLPI+TV+KIED F VI+SKPKPLAAY F+++++++K+FVQ++SAGGI  NDT++H TV 
Sbjct:   415 LLPIITVQKIEDGFQVIRSKPKPLAAYLFTNNKELEKQFVQDVSAGGITINDTVLHVTVK 474

Query:   469 SLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNG 528
              LPFGGVGESG+G+YHGKFS++ FSHKK VLYRSF+GD+  RYPPYT +K+ +L+AL + 
Sbjct:   475 DLPFGGVGESGIGAYHGKFSYETFSHKKGVLYRSFSGDADLRYPPYTPKKKMVLKALLSS 534

Query:   529 NIFGLLLALIGWSRD 543
             NIF  +LA  G+S+D
Sbjct:   535 NIFAAILAFFGFSKD 549

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS;IDA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009536 "plastid" evidence=ISS

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0033721 "aldehyde dehydrogenase (NADP+) activity" evidence=IDA

TAIR|locus:2205851 ALDH3H1 "AT1G44170" [Arabidopsis thaliana (taxid:3702)]

 Score = 1582 (562.0 bits), Expect = 1.7e-162, P = 1.7e-162
 Identities = 300/476 (63%), Positives = 374/476 (78%)

Query:    64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFE 123
             F   +A++L+ ELR +++   T+ YEWR++Q++ +  +              DL KP  E
Sbjct:     7 FGSAEASNLVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELE 66

Query:   124 TFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPF 183
             + + E+S+ ++S KLALK+LK W  PEKAKTSLTT+P+SAEI+SEPLGVVLVIS WNYPF
Sbjct:    67 SSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPF 126

Query:   184 LLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLE 243
             LLS+DP            LKPSE+APA+S+LL KLLE Y+D SAVRVVEGAV ETSALLE
Sbjct:   127 LLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAVRVVEGAVTETSALLE 186

Query:   244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
             QKWDKI YTGS ++GR++MAAAAKHLTPV+LELGGKSP VVDS  +L+VT RRII GKW 
Sbjct:   187 QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIVGKWG 246

Query:   304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
              NNGQAC+  DYI+TTK++APKLID+++ EL++F+GKNP+ESKD+SRIVN  HF RL+ L
Sbjct:   247 CNNGQACVSPDYILTTKEYAPKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLSKL 306

Query:   364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFD 423
             LDE +VSDKIVYGG++D + LKIAPTILLDVP DS IM EEIFGPLLPI+T+  +E+SFD
Sbjct:   307 LDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFD 366

Query:   424 VIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSY 483
             VI+S+PKPLAAY F+ ++++K+ F   +SAGGIV ND  VH  + +LPFGGVGESGMG+Y
Sbjct:   367 VIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAY 426

Query:   484 HGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIG 539
             HGKFSFDAFSHKKAVLYRS  GDS  RYPPY+  K +LL+AL + NIF L   L+G
Sbjct:   427 HGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDLFKVLLG 482

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS;IDA

GO:0009536 "plastid" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0009269 "response to desiccation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2122224 ALDH3F1 "AT4G36250" [Arabidopsis thaliana (taxid:3702)]

 Score = 1125 (401.1 bits), Expect = 4.5e-114, P = 4.5e-114
 Identities = 220/479 (45%), Positives = 299/479 (62%)

Query:    67 EKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFI 126
             E     ++E+R  + S +T+S +WR +QI +I  M             +DL K   E F 
Sbjct:     6 ETVEESLREMRETFASGRTRSLKWRKAQIGAIYEMVKDNEDKICNALFQDLGKHSTEAFR 65

Query:   127 SEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLS 186
              E+ +   +  +A+  L  W  P+ +K  L  YP+  ++ISEP G VLV+S+WN+P  LS
Sbjct:    66 DELGVVLRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLVLSSWNFPISLS 125

Query:   187 LDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKW 246
             LDP            LK SE++P  S+ LAK +  Y+D  A++V+EG     + LL+ +W
Sbjct:   126 LDPLIGAIAAGNTVLLKSSELSPNASAFLAKTIPAYLDTKAIKVIEGGPDVATILLQHQW 185

Query:   247 DKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS-TI--NLQVTTRRIIAGKWM 303
             DKI +TGSP++GRI+MAAAA+HLTPV LELGGK P +VD  TI  N++   +RI  GKW 
Sbjct:   186 DKIFFTGSPKIGRIIMAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIAGGKWG 245

Query:   304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
             + NGQACI VDY++  K FAP LID L+  +K FFG+NP ES  LSRI N  H  RL+ L
Sbjct:   246 SCNGQACISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQRLSRL 305

Query:   364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFD 423
             L + +V   IVYGG  DE +L + PTILLD P DS IM EEIFGP+LPI+TV  I++S  
Sbjct:   306 LSDPRVQASIVYGGSIDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITVRDIQESIG 365

Query:   424 VIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSY 483
             +I +KPKPLA Y F++DE +K   +   S+G + FND ++     +LPFGGVGESG+G Y
Sbjct:   366 IINTKPKPLAIYAFTNDENLKTRILSETSSGSVTFNDVMIQYMCDALPFGGVGESGIGRY 425

Query:   484 HGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIGWSR 542
             HGK+SFD FSH+KA++  S   D   RYPP+   K   +R  F    F L+L ++G  R
Sbjct:   426 HGKYSFDCFSHEKAIMEGSLGMDLEARYPPWNNFKLTFIRLAFREAYFKLILLMLGLKR 484

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0005737 "cytoplasm" evidence=ISM

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0019722 "calcium-mediated signaling" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

RGD|2088 Aldh3a1 "aldehyde dehydrogenase 3 family, member A1" [Rattus norvegicus (taxid:10116)]

 Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
 Identities = 191/447 (42%), Positives = 273/447 (61%)

Query:    73 MKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMT 132
             +K  R  +NS KT+S ++R+ Q++++  M              DL K  + ++  E++  
Sbjct:     8 VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 67

Query:   133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXX 192
                    +KEL  W + E    +  T      I SEPLGVVLVI  WNYPF L++ P   
Sbjct:    68 LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 127

Query:   193 XXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
                      LKPSE++   + LLA L+  Y+D +   VV+G V ET+ LL++++D I+YT
Sbjct:   128 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 187

Query:   253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
             GS  VG+IVMAAAAKHLTPV LELGGKSP  VD   +L V  RRI  GK+M N+GQ C+ 
Sbjct:   188 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM-NSGQTCVA 246

Query:   313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
              DYI+       ++++ L+  LK+F+G++  +S+D  RI+N  HF R+  L+D  KV+  
Sbjct:   247 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA-- 304

Query:   373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 432
               +GG  D+    IAPTIL+DV   S +M+EEIFGP++PIV V  +E++   I  + KPL
Sbjct:   305 --HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPL 362

Query:   433 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
             A Y FS++E++ K+ +   S+GG+  ND IVH TV +LPFGGVG SGMG+YHGK SF+ F
Sbjct:   363 ALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETF 422

Query:   493 SHKKAVLYRSFNGDST--TRYPPYTAE 517
             SH+++ L +S   +     RYPP  A+
Sbjct:   423 SHRRSCLVKSLLNEEAHKARYPPSPAK 449

GO:0001666 "response to hypoxia" evidence=IDA

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISO;IDA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISO;ISS

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0005737 "cytoplasm" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006081 "cellular aldehyde metabolic process" evidence=ISO;ISS

GO:0007568 "aging" evidence=IEP

GO:0007584 "response to nutrient" evidence=IEP

GO:0008106 "alcohol dehydrogenase (NADP+) activity" evidence=ISO;ISS

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0014070 "response to organic cyclic compound" evidence=IEP;IDA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=ISO

GO:0042493 "response to drug" evidence=IEP;IDA

GO:0051384 "response to glucocorticoid stimulus" evidence=IDA

GO:0051591 "response to cAMP" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=ISO;ISS

RGD|1359546 Aldh3b1 "aldehyde dehydrogenase 3 family, member B1" [Rattus norvegicus (taxid:10116)]

 Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
 Identities = 193/452 (42%), Positives = 279/452 (61%)

Query:    73 MKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMT 132
             +++LR  +N+ +T+S E+R +Q+Q +++              +DL K  FE+ +SEI+++
Sbjct:     8 LQQLREAFNAGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFESEVSEIAIS 67

Query:   133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXX 192
             ++   LAL+ L+ W K EK   +L T   SA I  EP G+VL+I  WNYP  L+L P   
Sbjct:    68 QAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPLNLTLVPLVG 127

Query:   193 XXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
                      LKPSEI+ AT  +LA++L  Y+D S   VV G   ET  LLE ++D I +T
Sbjct:   128 AIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFAVVLGGPQETGQLLEHRFDYIFFT 187

Query:   253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
             G+  VG+IVMAAAAKHLTP+ LELGGK+P  VD   + Q    R+   ++  N GQ C+ 
Sbjct:   188 GNTYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQTVANRVAWFRYF-NAGQTCVA 246

Query:   313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
              DY++ +++   +L+ +L+N +  F+G NP  S +L RI+N  HF RL  LL       +
Sbjct:   247 PDYVLCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFERLQGLLG----CGR 302

Query:   373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 432
             +  GGQ DE +  IAPT+L+DV +   +M+EEIFGP+LP+VTV  ++++ + I  + KPL
Sbjct:   303 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVTNLDEAIEFINRREKPL 362

Query:   433 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
             A Y FS   Q+ K+ +   S+GG   ND  +H T+SSLPFGGVG SGMG YHGKFSFD F
Sbjct:   363 ALYAFSKRSQVIKQVLARTSSGGFCGNDGFMHMTLSSLPFGGVGTSGMGRYHGKFSFDTF 422

Query:   493 SHKKAVLYRSFNGDSTT--RYPPYTAEKQKLL 522
             S+++A L RS   +     RYPPYT+   ++L
Sbjct:   423 SNQRACLLRSPGMEKINDLRYPPYTSRNLRVL 454

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IEA;ISO

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0034599 "cellular response to oxidative stress" evidence=ISO

GO:0046185 "aldehyde catabolic process" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|Q5XI42 Aldh3b1 "Aldehyde dehydrogenase family 3 member B1" [Rattus norvegicus (taxid:10116)]

 Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
 Identities = 193/452 (42%), Positives = 279/452 (61%)

Query:    73 MKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMT 132
             +++LR  +N+ +T+S E+R +Q+Q +++              +DL K  FE+ +SEI+++
Sbjct:     8 LQQLREAFNAGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFESEVSEIAIS 67

Query:   133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXX 192
             ++   LAL+ L+ W K EK   +L T   SA I  EP G+VL+I  WNYP  L+L P   
Sbjct:    68 QAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPLNLTLVPLVG 127

Query:   193 XXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
                      LKPSEI+ AT  +LA++L  Y+D S   VV G   ET  LLE ++D I +T
Sbjct:   128 AIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFAVVLGGPQETGQLLEHRFDYIFFT 187

Query:   253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
             G+  VG+IVMAAAAKHLTP+ LELGGK+P  VD   + Q    R+   ++  N GQ C+ 
Sbjct:   188 GNTYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQTVANRVAWFRYF-NAGQTCVA 246

Query:   313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
              DY++ +++   +L+ +L+N +  F+G NP  S +L RI+N  HF RL  LL       +
Sbjct:   247 PDYVLCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFERLQGLLG----CGR 302

Query:   373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 432
             +  GGQ DE +  IAPT+L+DV +   +M+EEIFGP+LP+VTV  ++++ + I  + KPL
Sbjct:   303 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVTNLDEAIEFINRREKPL 362

Query:   433 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
             A Y FS   Q+ K+ +   S+GG   ND  +H T+SSLPFGGVG SGMG YHGKFSFD F
Sbjct:   363 ALYAFSKRSQVIKQVLARTSSGGFCGNDGFMHMTLSSLPFGGVGTSGMGRYHGKFSFDTF 422

Query:   493 SHKKAVLYRSFNGDSTT--RYPPYTAEKQKLL 522
             S+++A L RS   +     RYPPYT+   ++L
Sbjct:   423 SNQRACLLRSPGMEKINDLRYPPYTSRNLRVL 454

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

UNIPROTKB|E2RPP8 ALDH3A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
 Identities = 197/490 (40%), Positives = 286/490 (58%)

Query:    57 EEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKD 116
             E + +Q  D     S ++ +R  + S +++   +R+ Q++++  M              D
Sbjct:    83 ESQTLQLMD-RAMESRIQRVRAAFASGRSRPVRFRLQQLEALRRMVQEREKDILEAIAGD 141

Query:   117 LSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176
             L K     +  E+        L L+ L  W   + AK +L T    A +  EPLGVVL+I
Sbjct:   142 LCKSELNAYSQEVITVLGELDLVLENLPEWVAAKPAKKNLLTMLDEAYVQPEPLGVVLII 201

Query:   177 STWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVA 236
               WNYPF+L++ P            +KPSE++  T+ +LA+LL  Y+D     V+ G V 
Sbjct:   202 GAWNYPFVLTIQPLIGAIAAGNAVIIKPSELSEKTAKILAELLPRYLDQDLYVVINGGVE 261

Query:   237 ETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRR 296
             ET+ LL+Q++D ILYTG+  VG+IVM AAAKHLTPV LELGGKSP  VD   +L +  RR
Sbjct:   262 ETTELLKQRFDHILYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYVDKDCDLDIACRR 321

Query:   297 IIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFH 356
             I  GK+M N GQ CI  DY++       +++  ++  +KEF+G+N  ES D  RI+N  H
Sbjct:   322 ITWGKYM-NCGQTCIAPDYVLCEPSLQNQIVQKIKETVKEFYGENIKESPDYERIINLRH 380

Query:   357 FARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVE 416
             F R+ SLL+      KI +GG+ DE    IAPTIL DV  +S +M+EEIFGP+LPIV V+
Sbjct:   381 FKRILSLLE----GQKIAFGGETDEATRYIAPTILSDVDPESRVMQEEIFGPILPIVPVK 436

Query:   417 KIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVG 476
               +++   I S+ KPLA Y FS ++++ ++ +   S+GG+  ND I+H T+SSLPFGGVG
Sbjct:   437 NADEAIKFINSREKPLAFYIFSHNDKLVRQMINGTSSGGVTANDVIMHFTLSSLPFGGVG 496

Query:   477 ESGMGSYHGKFSFDAFSHKKAVLYRSFN--GDSTTRYPPYTAEKQK-----LLRALFNGN 529
              SGMG+YHGK+SFD FSH++  L +S    G +  RYPP +  K       +L+    G 
Sbjct:   497 SSGMGAYHGKYSFDTFSHQRPCLLKSLKREGANKLRYPPNSQSKVDWAKFFILKRFNKGK 556

Query:   530 IFGLLLALIG 539
             +  L+L  +G
Sbjct:   557 LSLLVLTFLG 566

GO:0052814 "medium-chain-aldehyde dehydrogenase activity" evidence=IEA

GO:0050061 "long-chain-aldehyde dehydrogenase activity" evidence=IEA

GO:0046577 "long-chain-alcohol oxidase activity" evidence=IEA

GO:0033306 "phytol metabolic process" evidence=IEA

GO:0008544 "epidermis development" evidence=IEA

GO:0007422 "peripheral nervous system development" evidence=IEA

GO:0007417 "central nervous system development" evidence=IEA

GO:0006714 "sesquiterpenoid metabolic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

MGI|MGI:1914939 Aldh3b1 "aldehyde dehydrogenase 3 family, member B1" [Mus musculus (taxid:10090)]

 Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
 Identities = 192/452 (42%), Positives = 277/452 (61%)

Query:    73 MKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMT 132
             +++LR  +   +T+S E+R +Q+Q +++              +DL K  FE  +SEI+++
Sbjct:     8 LQQLREAFKEGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFEAEVSEIAIS 67

Query:   133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXX 192
             ++   LAL+ L+ W K EK   +L T   SA I  EP G+VL+I  WNYP  L+L P   
Sbjct:    68 QAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPINLTLVPLVG 127

Query:   193 XXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
                      LKPSEI+ AT  +LA++L  Y+D S   VV G   ET  LLE K+D I +T
Sbjct:   128 AIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFTVVLGGRQETGQLLEHKFDYIFFT 187

Query:   253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
             G+  VG+IVMAAAAKHLTP+ LELGGK+P  VD   + Q+   R+   ++  N GQ C+ 
Sbjct:   188 GNAYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQIVANRVAWFRYF-NAGQTCVA 246

Query:   313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
              DYI+ +++   +L+ +L+N +  F+G NP  S +L RI+N  HF RL  LL       +
Sbjct:   247 PDYILCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFKRLQGLLG----CGR 302

Query:   373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 432
             +  GGQ DE +  IAPT+L+DV +   +M+EEIFGP+LP+VTV  ++++ + +  + KPL
Sbjct:   303 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVRSLDEAIEFMNRREKPL 362

Query:   433 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
             A Y FS   Q+ K+ +   S+GG   ND  +H T+SSLPFGGVG SGMG YHGKFSFD F
Sbjct:   363 ALYAFSKRSQVIKQVLARTSSGGFCGNDGFMHMTLSSLPFGGVGTSGMGRYHGKFSFDTF 422

Query:   493 SHKKAVLYRSFNGDSTT--RYPPYTAEKQKLL 522
             S+++A L RS   +     RYPPY++   ++L
Sbjct:   423 SNQRACLLRSPGMEKINDLRYPPYSSRNLRVL 454

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0034599 "cellular response to oxidative stress" evidence=ISO

GO:0046185 "aldehyde catabolic process" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|D4A137 Aldh3a2 "Aldehyde dehydrogenase" [Rattus norvegicus (taxid:10116)]

 Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
 Identities = 195/473 (41%), Positives = 275/473 (58%)

Query:    73 MKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMT 132
             ++ LR  + S +++   +R+ Q++++  M              DLSK     +  E+   
Sbjct:     5 VQRLRQTFRSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLSKSELNAYSHEVITI 64

Query:   133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXX 192
                    L  L        AK +L T    A +  EPLGVVL+I  WNYPF+L+L P   
Sbjct:    65 LGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTLQPLVG 124

Query:   193 XXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
                      +KPSE++  T+ +LA+LL  Y+D     +V G V ET+ LL Q++D ILYT
Sbjct:   125 AIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYMIVNGGVEETTELLRQRFDHILYT 184

Query:   253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
             G+  VG+IVM AAAKHLTPV LELGGKSP  +D   +L V  RRI  GK+M N GQ CI 
Sbjct:   185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKYM-NCGQTCIA 243

Query:   313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
              DYI+       +++  +++ +K+F+G+N   S D  RI+N  HF R+ SLL+      K
Sbjct:   244 PDYILCEASLQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLE----GQK 299

Query:   373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 432
             I +GG+ DE    IAPTIL DV  +S +M+EEIFGP+LPIV+V+ +E++ + I  + KPL
Sbjct:   300 IAFGGETDEATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPL 359

Query:   433 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
             A Y FS + ++ K  +   S+GG+  ND I+H TV+SLPFGGVG SGMG+YHGK+SFD F
Sbjct:   360 ALYIFSHNNKLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTF 419

Query:   493 SHKKAVLYRSFNGDSTT--RYPPYTAEKQK-----LLRALFNGNIFGLLLALI 538
             SH++  L +   G+S    RYPP +  K       LL+    G +  LLL  +
Sbjct:   420 SHQRPCLLKGLKGESVNKLRYPPNSESKVSWSKFFLLKQFNKGRLQLLLLVCL 472

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

RGD|61866 Aldh3a2 "aldehyde dehydrogenase 3 family, member A2" [Rattus norvegicus (taxid:10116)]

 Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
 Identities = 195/473 (41%), Positives = 275/473 (58%)

Query:    73 MKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMT 132
             ++ LR  + S +++   +R+ Q++++  M              DLSK     +  E+   
Sbjct:     5 VQRLRQTFRSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLSKSELNAYSHEVITI 64

Query:   133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXX 192
                    L  L        AK +L T    A +  EPLGVVL+I  WNYPF+L+L P   
Sbjct:    65 LGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTLQPLVG 124

Query:   193 XXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
                      +KPSE++  T+ +LA+LL  Y+D     +V G V ET+ LL Q++D ILYT
Sbjct:   125 AIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYMIVNGGVEETTELLRQRFDHILYT 184

Query:   253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
             G+  VG+IVM AAAKHLTPV LELGGKSP  +D   +L V  RRI  GK+M N GQ CI 
Sbjct:   185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKYM-NCGQTCIA 243

Query:   313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
              DYI+       +++  +++ +K+F+G+N   S D  RI+N  HF R+ SLL+      K
Sbjct:   244 PDYILCEASSQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLE----GQK 299

Query:   373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 432
             I +GG+ DE    IAPTIL DV  +S +M+EEIFGP+LPIV+V+ +E++ + I  + KPL
Sbjct:   300 IAFGGETDEATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPL 359

Query:   433 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
             A Y FS + ++ K  +   S+GG+  ND I+H TV+SLPFGGVG SGMG+YHGK+SFD F
Sbjct:   360 ALYIFSHNNKLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTF 419

Query:   493 SHKKAVLYRSFNGDSTT--RYPPYTAEKQK-----LLRALFNGNIFGLLLALI 538
             SH++  L +   G+S    RYPP +  K       LL+    G +  LLL  +
Sbjct:   420 SHQRPCLLKGLKGESVNKLRYPPNSESKVSWSKFFLLKQFNKGRLQLLLLVCL 472

GO:0000302 "response to reactive oxygen species" evidence=IDA

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=IDA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA;ISO

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0005634 "nucleus" evidence=IDA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO

GO:0005777 "peroxisome" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO;IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA;ISO

GO:0006714 "sesquiterpenoid metabolic process" evidence=IEA;ISO

GO:0007417 "central nervous system development" evidence=IEA;ISO

GO:0007422 "peripheral nervous system development" evidence=IEA;ISO

GO:0008544 "epidermis development" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0033306 "phytol metabolic process" evidence=IEA;ISO

GO:0042406 "extrinsic to endoplasmic reticulum membrane" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0046292 "formaldehyde metabolic process" evidence=IDA

GO:0046577 "long-chain-alcohol oxidase activity" evidence=IEA;ISO

GO:0050061 "long-chain-aldehyde dehydrogenase activity" evidence=IEA;ISO

GO:0052814 "medium-chain-aldehyde dehydrogenase activity" evidence=IEA;ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q80VQ0	AL3B1_MOUSE	1, ., 2, ., 1, ., 5	0.4491	0.8195	0.9508	yes	no
P43353	AL3B1_HUMAN	1, ., 2, ., 1, ., 5	0.4336	0.8195	0.9508	yes	no
Q9I6C8	CALB_PSEAE	1, ., 2, ., 1, ., 6, 8	0.3566	0.8508	0.9705	yes	no
P39616	ALDH2_BACSU	1, ., 2, ., 1, ., 3	0.4266	0.8029	0.9561	yes	no
Q8VXQ2	ALDH_CRAPL	1, ., 2, ., 1, ., 3	0.6257	0.8802	0.9979	N/A	no
Q04458	HFD1_YEAST	1, ., 2, ., 1, ., -	0.3368	0.8360	0.8533	yes	no
Q54DG1	ALDH3_DICDI	1, ., 2, ., 1, ., 5	0.4246	0.8305	0.9595	yes	no
Q1JPA0	AL3B1_BOVIN	1, ., 2, ., 1, ., 5	0.4483	0.8250	0.9572	yes	no
Q5XI42	AL3B1_RAT	1, ., 2, ., 1, ., 5	0.4513	0.8195	0.9508	yes	no
Q8W033	AL3I1_ARATH	1, ., 2, ., 1, ., 3	0.6707	0.9097	0.8981	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.2.1	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00019283001	SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (549 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00038001001	SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (622 aa)						•	•		0.919
	GSVIVG00035907001	SubName- Full=Chromosome chr10 scaffold_81, whole genome shotgun sequence; (215 aa)						•			0.899
	ADH2	SubName- Full=Putative uncharacterized protein (Chromosome chr4 scaffold_73, whole genome shotg [...] (380 aa)						•			0.899
	GSVIVG00034833001	SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (380 aa)						•			0.899
	GSVIVG00034832001	SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (380 aa)						•			0.899
	GSVIVG00034830001	SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (380 aa)						•			0.899
	GSVIVG00031273001	SubName- Full=Chromosome undetermined scaffold_55, whole genome shotgun sequence; (411 aa)						•			0.899
	GSVIVG00030679001	SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (476 aa)						•			0.899
	GSVIVG00030677001	SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (495 aa)						•			0.899
	GSVIVG00029757001	SubName- Full=Chromosome chr10 scaffold_50, whole genome shotgun sequence; (293 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	543
cd07137	432	cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase	0.0
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	0.0
PLN02174	484	PLN02174, PLN02174, aldehyde dehydrogenase family	0.0
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	0.0
PLN02203	484	PLN02203, PLN02203, aldehyde dehydrogenase	0.0
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	0.0
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	0.0
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	0.0
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	1e-169
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	1e-164
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	1e-118
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	4e-98
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	9e-96
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	1e-86
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	2e-85
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	7e-66
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	1e-62
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	4e-59
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	8e-57
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	2e-56
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	3e-56
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	1e-54
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	6e-54
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	2e-53
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	3e-53
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	4e-53
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	8e-53
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	9e-52
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	6e-51
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	2e-50
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	2e-49
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	6e-49
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	8e-48
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	6e-47
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	6e-47
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	6e-47
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	8e-47
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	5e-46
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	7e-46
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	4e-45
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	8e-45
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	1e-44
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	4e-44
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	5e-44
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	7e-44
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	9e-44
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	1e-43
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	7e-43
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	2e-42
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	3e-42
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	4e-42
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	2e-41
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	3e-41
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	4e-41
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	4e-41
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	5e-41
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	9e-41
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	1e-40
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	2e-40
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	2e-39
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	2e-39
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	4e-39
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	1e-38
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	7e-38
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	7e-38
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	1e-37
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	3e-37
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	5e-37
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	7e-37
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	2e-36
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	4e-36
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	2e-35
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	7e-34
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	7e-34
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	9e-34
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	1e-33
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	1e-33
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	6e-32
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	2e-31
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	5e-31
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	6e-31
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	1e-30
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	1e-30
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	8e-30
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	1e-28
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	2e-28
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	8e-28
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	3e-27
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	1e-25
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	2e-25
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	4e-25
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	3e-24
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	3e-24
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	7e-23
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	8e-22
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	1e-20
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	1e-19
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	6e-17
cd07084	442	cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+	5e-16
cd07077	397	cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh	6e-15
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	8e-15
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	2e-14
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	3e-14
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	7e-13
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	2e-12
cd07129	454	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh	2e-10
cd07081	439	cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla	8e-10
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	1e-09
TIGR02278	663	TIGR02278, PaaN-DH, phenylacetic acid degradation	5e-08
cd07121	429	cd07121, ALDH_EutE, Ethanolamine utilization prote	9e-08
cd07122	436	cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh	3e-05
PRK15398	465	PRK15398, PRK15398, aldehyde dehydrogenase EutE; P	5e-05
cd07127	549	cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat	5e-05
TIGR01092	715	TIGR01092, P5CS, delta l-pyrroline-5-carboxylate s	7e-05
TIGR02518	488	TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (	7e-05
TIGR02288	551	TIGR02288, PaaN_2, phenylacetic acid degradation p	2e-04

>gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

 Score =  745 bits (1926), Expect = 0.0
 Identities = 282/432 (65%), Positives = 353/432 (81%)

Query: 69  AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE 128
           A  L++ELR  + S +T+S EWR SQ++ +  +++E E++I  A+ +DL KP  E+F  E
Sbjct: 1   APRLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDE 60

Query: 129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLD 188
           +S+  SSCKLA+KELK W  PEK KT LTT+P+ AEI+SEPLGVVLVIS WN+PFLLSL+
Sbjct: 61  VSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLE 120

Query: 189 PVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDK 248
           PVIGAIAAGNAVVLKPSE+APATS+LLAKL+ +Y+D  A++V+EG V ET+ALLEQKWDK
Sbjct: 121 PVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAIKVIEGGVPETTALLEQKWDK 180

Query: 249 ILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQ 308
           I +TGSPRVGRI+MAAAAKHLTPV LELGGK P +VDST++L+V  RRI  GKW  NNGQ
Sbjct: 181 IFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQ 240

Query: 309 ACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK 368
           ACI  DY++  + FAP LID+L+N L++FFG+NP ESKDLSRIVN  HF RL+ LLD+  
Sbjct: 241 ACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPS 300

Query: 369 VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSK 428
           V+DKIV+GG+RDEK L I PTILLD P DS+IM EEIFGPLLPI+TV+KIE+S ++I S+
Sbjct: 301 VADKIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSR 360

Query: 429 PKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS 488
           PKPLAAY F+ ++++K+  V   S+GG+ FNDT+V   + +LPFGGVGESG G+YHGKFS
Sbjct: 361 PKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFS 420

Query: 489 FDAFSHKKAVLY 500
           FDAFSHKKAVLY
Sbjct: 421 FDAFSHKKAVLY 432

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score =  661 bits (1708), Expect = 0.0
 Identities = 225/431 (52%), Positives = 300/431 (69%), Gaps = 5/431 (1%)

Query: 70  ASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEI 129
           A L+  LR  + + KT+S EWR +Q++++  M+ E EEEI  A++ DL KPP E +++EI
Sbjct: 1   AELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEI 60

Query: 130 SMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDP 189
           ++       ALK LK W KP +    L   P+ A +I EPLGVVL+I  WNYP  L+L P
Sbjct: 61  AVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAP 120

Query: 190 VIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKI 249
           +IGAIAAGN VVLKPSE+APATS+LLAKL+  Y D  AV VVEG V   +ALL + +D I
Sbjct: 121 LIGAIAAGNTVVLKPSELAPATSALLAKLIPKYFDPEAVAVVEGGVEVATALLAEPFDHI 180

Query: 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309
            +TGSP VG+IVM AAAKHLTPV LELGGKSP +VD   NL+V  RRI  GK++ N GQ 
Sbjct: 181 FFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFL-NAGQT 239

Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
           CI  DY++  +    +LI+ L+  +KEF+G++P ES D  RI+N  HF RLASLLD    
Sbjct: 240 CIAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLD---- 295

Query: 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP 429
             K+V GGQ D+++  IAPTIL DV  DS +M+EEIFGP+LPI+T + ++++ + I S+P
Sbjct: 296 DGKVVIGGQVDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRP 355

Query: 430 KPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF 489
           KPLA Y FS+D+ +++  +   S+GG+  ND ++H  + +LPFGGVG SGMG+YHGK  F
Sbjct: 356 KPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGF 415

Query: 490 DAFSHKKAVLY 500
           D FSH K+VL 
Sbjct: 416 DTFSHLKSVLK 426

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1

 Score =  655 bits (1692), Expect = 0.0
 Identities = 317/478 (66%), Positives = 394/478 (82%)

Query: 64  FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFE 123
           F    A+ L+ ELR +++   T+ YEWR++Q++ +  + +  E EI+ A+  DL KP  E
Sbjct: 7   FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELE 66

Query: 124 TFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPF 183
           + + E+S+ ++S KLALK+LK W  PEKAKTSLTT+P+SAEI+SEPLGVVLVIS WNYPF
Sbjct: 67  SSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPF 126

Query: 184 LLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLE 243
           LLS+DPVIGAI+AGNAVVLKPSE+APA+S+LLAKLLE Y+D+SAVRVVEGAV ET+ALLE
Sbjct: 127 LLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLDSSAVRVVEGAVTETTALLE 186

Query: 244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
           QKWDKI YTGS ++GR++MAAAAKHLTPV+LELGGKSP VVDS  +L+VT RRIIAGKW 
Sbjct: 187 QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWG 246

Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
            NNGQACI  DYI+TTK++APK+ID+++ EL+ F+GKNPMESKD+SRIVN  HF RL+ L
Sbjct: 247 CNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKL 306

Query: 364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFD 423
           LDE +VSDKIVYGG++D + LKIAPTILLDVP DS IM EEIFGPLLPI+T+  +E+SFD
Sbjct: 307 LDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFD 366

Query: 424 VIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSY 483
           VI+S+PKPLAAY F+ ++++K+ F   +SAGGIV ND  VH  + +LPFGGVGESGMG+Y
Sbjct: 367 VIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAY 426

Query: 484 HGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIGWS 541
           HGKFSFDAFSHKKAVLYRS  GDS  RYPPY+  K +LL+AL + NIF +   L+G S
Sbjct: 427 HGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDIFKVLLGLS 484

Length = 484

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score =  627 bits (1619), Expect = 0.0
 Identities = 228/454 (50%), Positives = 316/454 (69%), Gaps = 5/454 (1%)

Query: 70  ASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEI 129
            SL+++ R  + +  TK  E+R+ Q++ +   I++ E EI+EA+ KDL K  FE +++EI
Sbjct: 1   ESLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEI 60

Query: 130 SMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDP 189
               S    A+K LK W KP++ KT L  +PS + I  EP GVVL+I+ WNYPF L+L P
Sbjct: 61  GFVLSEINYAIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAP 120

Query: 190 VIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKI 249
           +IGAIAAGN  VLKPSE+ P TS ++AK++E+  D   V VVEG V E   LL+QK+D I
Sbjct: 121 LIGAIAAGNTAVLKPSELTPNTSKVIAKIIEETFDEEYVAVVEGGVEENQELLDQKFDYI 180

Query: 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309
            +TGS RVG+IVM AAAKHLTPV LELGGKSP +VD   NL++  +RI+ GK++ N GQ 
Sbjct: 181 FFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFL-NAGQT 239

Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
           C+  DY++  +    K I  L+ E+K+F+G++P+ES D  RI+N  HF RLA LLD    
Sbjct: 240 CVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDN--- 296

Query: 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP 429
             KIV+GG  D + L I PTIL +V  D  +M+EEIFGP+LP++T + ++++ ++IKS+P
Sbjct: 297 -GKIVFGGNTDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRP 355

Query: 430 KPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF 489
           KPLA Y FS+D++++K+ ++N+S GG   NDTI+H     LPFGGVG SGMGSYHGK+SF
Sbjct: 356 KPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSF 415

Query: 490 DAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLR 523
           D FSHKK++L +S   D   RYPPY  +K+KL +
Sbjct: 416 DTFSHKKSILKKSTWFDLPLRYPPYKGKKKKLKK 449

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase

 Score =  617 bits (1594), Expect = 0.0
 Identities = 254/474 (53%), Positives = 338/474 (71%), Gaps = 3/474 (0%)

Query: 72  LMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISM 131
            + ELR  Y S +T+S EWR SQ++ +  ++++ EE I +A+H+DL K   E +  E+ +
Sbjct: 11  SVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGV 70

Query: 132 TKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVI 191
              S  LAL  LK W  P+KAK  L  +P++AE++ EPLGVVL+ S+WN+P  LSL+P+I
Sbjct: 71  LTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLI 130

Query: 192 GAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILY 251
           GAIAAGNAVVLKPSE+APATS+ LA  +  Y+D+ AV+V+EG  A    LL+ KWDKI +
Sbjct: 131 GAIAAGNAVVLKPSELAPATSAFLAANIPKYLDSKAVKVIEGGPAVGEQLLQHKWDKIFF 190

Query: 252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD---STINLQVTTRRIIAGKWMANNGQ 308
           TGSPRVGRI+M AAAKHLTPV LELGGK P +VD   S+ + +V   RI+ GKW +  GQ
Sbjct: 191 TGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQ 250

Query: 309 ACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK 368
           ACI +DY++  + FAP LI+ L++ +K+FFG+NP ESK ++RI+N  HF RL++LL + +
Sbjct: 251 ACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPR 310

Query: 369 VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSK 428
           V+  IV+GG  DEK+L I PTILL+ P DS IM EEIFGPLLPI+TV+KIEDS   I SK
Sbjct: 311 VAASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSK 370

Query: 429 PKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS 488
           PKPLA Y F+++E++K+  +   S+G + FND I+     SLPFGGVGESG G YHGK+S
Sbjct: 371 PKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYS 430

Query: 489 FDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIGWSR 542
           FD FSH+KAVL RS   +   RYPP+   K   LR ++  + FGLLL L+G  R
Sbjct: 431 FDTFSHEKAVLRRSLLTEFEFRYPPWNDFKLGFLRLVYRFDYFGLLLLLLGLKR 484

Length = 484

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score =  606 bits (1565), Expect = 0.0
 Identities = 225/448 (50%), Positives = 307/448 (68%), Gaps = 7/448 (1%)

Query: 70  ASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEI 129
           A  ++  R  ++S KT+  E+R+ Q++++  M+EE E+EI+EA+ KDL KP FE  +SEI
Sbjct: 1   AEAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEI 60

Query: 130 SMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDP 189
            + K+  K A+  L  W KPE  K +L T      I  EPLGVVL+I  WNYP  L+L P
Sbjct: 61  LLVKNEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVP 120

Query: 190 VIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKI 249
           ++GAIAAGN VV+KPSE++PAT+ LLA+L+  Y+D     VV G V ET+ LL+Q++D I
Sbjct: 121 LVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPVVLGGVEETTELLKQRFDYI 180

Query: 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309
            YTGS  VG+IVM AAAKHLTPV LELGGKSP  VD + ++ V  RRI  GK++ N GQ 
Sbjct: 181 FYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFI-NAGQT 239

Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
           CI  DY++ T +   K +++L+  LKEF+G++P ES D  RI+N  HF RL  LL     
Sbjct: 240 CIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLS---- 295

Query: 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP 429
             K+  GGQ DEK+  IAPT+L DV     +M+EEIFGP+LPIVTV  ++++ + I S+ 
Sbjct: 296 GGKVAIGGQTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSRE 355

Query: 430 KPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF 489
           KPLA Y FS+++++  + + N S+GG+  NDTI+H T+ SLPFGGVG SGMG+YHGK+SF
Sbjct: 356 KPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSF 415

Query: 490 DAFSHKKAVLYRSFNGDSTT--RYPPYT 515
           D FSHK++ L +S N +     RYPPY+
Sbjct: 416 DTFSHKRSCLVKSLNMEKLNSLRYPPYS 443

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score =  588 bits (1518), Expect = 0.0
 Identities = 226/469 (48%), Positives = 321/469 (68%), Gaps = 5/469 (1%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           + E    ++K+L+ ++ + KT+  E+R  Q++++  M+EE ++E  EA+HKDL + PFET
Sbjct: 5   NPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFET 64

Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
            ++E+ +T +  +  LK L  + KPEK  T     P  + II EPLGVVLVI  WNYP  
Sbjct: 65  KMTEVLLTVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLN 124

Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQ 244
           L+L P+ GAIAAGN VVLKPSE++P TS L+AKLL  Y+D S VRV+EG V  T+ LL++
Sbjct: 125 LTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKYLDPSYVRVIEGGVEVTTELLKE 184

Query: 245 KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMA 304
            +D I +TGSPRVG++VM AAA++LTP  LELGGKSP +VD + NL+V  RRI  GK++ 
Sbjct: 185 PFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFL- 243

Query: 305 NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLL 364
           N GQ C+  DY++  +    K I++L+  +KEFFG++P +S+D SRIVN FH  RLA L+
Sbjct: 244 NAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELI 303

Query: 365 DEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDV 424
            +     K+VYGG+ D +   +APTI+++   DS +M+EEIFGP+LPI+T E I++  + 
Sbjct: 304 KDHG--GKVVYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEF 361

Query: 425 IKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYH 484
           I S+PKPLA Y+F +D++ K+  ++N S+G +V ND + H    +LPFGGVG SGMG+YH
Sbjct: 362 INSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYH 421

Query: 485 GKFSFDAFSHKKAVLYRSFNG--DSTTRYPPYTAEKQKLLRALFNGNIF 531
           GK+ FD FSH K VL +S     D + RYPPYT+ K  +L  L   +I 
Sbjct: 422 GKYGFDTFSHPKPVLNKSTGNSFDLSLRYPPYTSFKSWVLSFLLKLSIP 470

Length = 493

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score =  552 bits (1424), Expect = 0.0
 Identities = 207/430 (48%), Positives = 284/430 (66%), Gaps = 4/430 (0%)

Query: 71  SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEIS 130
           S+   LR  + S KTK  E+R+ Q++ +   +++ EE I+EA+ KDL +PPFET ++E+S
Sbjct: 9   SIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVS 68

Query: 131 MTKSSCKLALKELKYWTKPEKAK-TSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDP 189
             K+     LK LK W K EK K   L        I  EPLGVVL+I  WNYP LL+L P
Sbjct: 69  GVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSP 128

Query: 190 VIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKI 249
           ++GAIAAG  VVLKPSE+ P T++LLA+L+  Y+D  A +VV+G V ET+ALLEQK+DKI
Sbjct: 129 LVGAIAAGCTVVLKPSELTPHTAALLAELVPKYLDPDAFQVVQGGVPETTALLEQKFDKI 188

Query: 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309
            YTGS RVGRI+  AAAKHLTPV LELGGKSP +V    +L++  +RI+ GK+  N GQ 
Sbjct: 189 FYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFG-NAGQI 247

Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
           C+  DY++       + ++ L+  L EF+      S D +RIVNP HF RL SLLD  K 
Sbjct: 248 CVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTK- 306

Query: 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP 429
             K+V GG+ DE    I PTI+ DV  D ++M EE+FGP+LPI+ V+ ++++  VI S+ 
Sbjct: 307 -GKVVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRD 365

Query: 430 KPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF 489
            PLA Y F+DD+      +    +GG+V NDT++H  V + PFGGVG+SG G+YHGK+ F
Sbjct: 366 TPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGF 425

Query: 490 DAFSHKKAVL 499
           D F+H++ V+
Sbjct: 426 DTFTHERTVV 435

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score =  484 bits (1249), Expect = e-169
 Identities = 190/428 (44%), Positives = 271/428 (63%), Gaps = 6/428 (1%)

Query: 76  LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSS 135
            + +  + +  +   R+++++ +   I  + EEII A+  D  KP  E  ++EI    S 
Sbjct: 7   QQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSE 66

Query: 136 CKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIA 195
              A+K LK W KP++ +T L  + + ++I  EP GV L+IS WNYPF L+  P++ AIA
Sbjct: 67  INHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIA 126

Query: 196 AGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSP 255
           AGN  +LKPSE+ P TS+++AK++ +  D   V V EG      ALLE  +D I +TGSP
Sbjct: 127 AGNTAILKPSELTPHTSAVIAKIIREAFDEDEVAVFEGDAEVAQALLELPFDHIFFTGSP 186

Query: 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDY 315
            VG+IVMAAAAKHL  V LELGGKSP +VD T +L+   ++I  GK++ N GQ CI  DY
Sbjct: 187 AVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFL-NAGQTCIAPDY 245

Query: 316 IITTKDFAPKLIDSLRNELKEFFGKNPM--ESKDLSRIVNPFHFARLASLLDEDKVSD-- 371
           +   +      ++ L+ E+++F+GK+     S DL+RIVN  HF RL  LLD D V+   
Sbjct: 246 VFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLD-DAVAKGA 304

Query: 372 KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKP 431
           K+ +GGQ D  Q  IAPT+L +V  D  IM+EEIFGP+LPI+T E +++  + I +KPKP
Sbjct: 305 KVEFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKP 364

Query: 432 LAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDA 491
           LA Y FS D+    + +   S+GG+V ND ++H    +LPFGGV  SG+GSYHG + F A
Sbjct: 365 LALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKA 424

Query: 492 FSHKKAVL 499
           FSH++AVL
Sbjct: 425 FSHERAVL 432

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score =  471 bits (1216), Expect = e-164
 Identities = 170/447 (38%), Positives = 257/447 (57%), Gaps = 20/447 (4%)

Query: 61  MQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLS-K 119
               + +KAA L     N   S      E R  ++  +  ++ + ++ + EAI  D   +
Sbjct: 1   QALLERQKAAFL----ANPPPS-----LEERRDRLDRLKALLLDNQDALAEAISADFGHR 51

Query: 120 PPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179
              ET ++EI  + +  K A K LK W KP +    L   P+ AE+  +PLGVV +I  W
Sbjct: 52  SRHETLLAEILPSIAGIKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPW 111

Query: 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETS 239
           NYP  L+L P+I A+AAGN V++KPSE  P TS+LLA+LL +Y D   V VV G     +
Sbjct: 112 NYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDEDEVAVVTGGADVAA 171

Query: 240 ALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIA 299
           A     +D +L+TGS  VGR VM AAA++LTPV LELGGKSPA++    +L     RI  
Sbjct: 172 AFSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAF 231

Query: 300 GKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFAR 359
           GK + N GQ C+  DY++  +D   + + + +  + + +     ++ D + I+N  H+AR
Sbjct: 232 GK-LLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYP-TLADNPDYTSIINERHYAR 289

Query: 360 LASLLDEDKVSDK------IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413
           L  LL++ +   K      +   G+      K+ PT++L+V DD  +M+EEIFGP+LPI+
Sbjct: 290 LQGLLEDAR--AKGARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPIL 347

Query: 414 TVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFG 473
           T + ++++ D I ++P+PLA Y+F +D+  +   ++   +GG+  NDT++H     LPFG
Sbjct: 348 TYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFG 407

Query: 474 GVGESGMGSYHGKFSFDAFSHKKAVLY 500
           GVG SGMG+YHGK  F  FSH K V  
Sbjct: 408 GVGASGMGAYHGKEGFLTFSHAKPVFK 434

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  356 bits (915), Expect = e-118
 Identities = 128/427 (29%), Positives = 211/427 (49%), Gaps = 13/427 (3%)

Query: 80  YNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLA 139
           + +        R + ++ +A+++EE+ EE+      +  KP  E  + E++    + +  
Sbjct: 11  FKAWAALPPAERAAILRKLADLLEERREELAALETLETGKP-IEEALGEVARAADTFRYY 69

Query: 140 LKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 199
               +                  A +  EPLGVV  I+ WN+P LL+   +  A+AAGN 
Sbjct: 70  AGLARRLHGEVIP---SPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNT 126

Query: 200 VVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETS-ALLEQKW-DKILYTGSPR 256
           VVLKPSE+ P T+ LLA+LL +  +    + VV G   E   AL      DKI +TGS  
Sbjct: 127 VVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTA 186

Query: 257 VGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYI 316
           VG+ +M AAA++L  V LELGGKSP +V    +L    +  + G +  N GQ C     +
Sbjct: 187 VGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFG-NAGQVCTAASRL 245

Query: 317 ITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDK-VSDKIV 374
           +  +    + ++ L   +K     NP++   D+  +++     R+ + +++ K    K++
Sbjct: 246 LVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLL 305

Query: 375 YGGQRDE--KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 432
            GG+R E  K   + PT+L DV  D  I +EEIFGP+LP++  +  E++ ++       L
Sbjct: 306 CGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGL 365

Query: 433 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
           AA  F+ D +      + + AG +  ND  V     S PFGGV +SG+G   G +  + +
Sbjct: 366 AAGVFTRDLERALRVAERLEAGTVWINDYSVG-AEPSAPFGGVKQSGIGREGGPYGLEEY 424

Query: 493 SHKKAVL 499
           +  K V 
Sbjct: 425 TEPKTVT 431

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  305 bits (783), Expect = 4e-98
 Identities = 143/458 (31%), Positives = 220/458 (48%), Gaps = 19/458 (4%)

Query: 52  ATMA--AEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEI 109
           AT    A        DV+ A   +   R  + +    S E R + ++ IA+++E + EE+
Sbjct: 22  ATGEVIATVPAATAEDVDAA---VAAARAAFEAWSRLSAEERAAILRRIADLLEARAEEL 78

Query: 110 IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEP 169
              I  +  KP  E    EI+      +   +E +         T  T   S A +  EP
Sbjct: 79  AALITLETGKPISEARG-EIARAADFIRYYAEEARRLEGE----TIPTDKGSKALVRREP 133

Query: 170 LGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAV 228
           LGVV  I+ WN+P  L+   +  A+AAGN VVLKPSE  P ++  LA+L  +  +    +
Sbjct: 134 LGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVL 193

Query: 229 RVVEGAVAETS-ALLEQKW-DKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286
            VV G  AE   AL+     D I +TGS  VGR + AAAA +L PV LELGGKSPA+V  
Sbjct: 194 NVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLE 253

Query: 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ES 345
             +L       + G +  N GQ C     +I  +    + ++ L          +P+  S
Sbjct: 254 DADLDAAVDAAVFGAFF-NAGQRCTAASRLIVHESVYDEFVERLVARAASLKVGDPLDPS 312

Query: 346 KDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKE 403
            DL  +++     R+   + ED V++  +++ GG+R      + PTIL  V  D  I +E
Sbjct: 313 TDLGPLISEEQLDRVEGYI-EDAVAEGARLLAGGKRPGGYF-VEPTILEGVTPDMRIARE 370

Query: 404 EIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIV 463
           EIFGP+LP++  +  E++ ++       LAA  F+ D        + + AG +  ND   
Sbjct: 371 EIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTG 430

Query: 464 HTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 501
              ++ LPFGGV +SG+G   GK+  + F+  K V  +
Sbjct: 431 GADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIK 468

Length = 472

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score =  295 bits (757), Expect = 9e-96
 Identities = 126/426 (29%), Positives = 192/426 (45%), Gaps = 66/426 (15%)

Query: 77  RNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSC 136
           R  + +        R + ++ IA+++EE+ EE+      +  KP  E  + E++    + 
Sbjct: 4   RAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKP-IEEALGEVARAIDTF 62

Query: 137 KLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAA 196
           + A        K    +         A +  EPLGVV VI+ WN+P LL+   +  A+AA
Sbjct: 63  RYAAGLAD---KLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAA 119

Query: 197 GNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETS-ALLEQKW-DKILYTG 253
           GN VVLKPSE+ P T+  LA+LL++  +    V VV G   E   ALL     DKI +TG
Sbjct: 120 GNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTG 179

Query: 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGV 313
           S  VG+ +M AAA++L PV LELGGKSP +VD   +L       + G +  N GQ C   
Sbjct: 180 STAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFF-NAGQICTAA 238

Query: 314 DYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKI 373
                                              SR+           L+ E  + D+ 
Sbjct: 239 -----------------------------------SRL-----------LVHES-IYDEF 251

Query: 374 VYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLA 433
           V       ++L    T+L+DV  D  I +EEIFGP+LP++  +  E++  +       L 
Sbjct: 252 V-------EKLV---TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLT 301

Query: 434 AYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS 493
           A  F+ D        + + AG +  ND+ +       PFGGV  SG+G   G +  + ++
Sbjct: 302 AGVFTRDLNRALRVAERLRAGTVYINDSSIGVGP-EAPFGGVKNSGIGREGGPYGLEEYT 360

Query: 494 HKKAVL 499
             K V+
Sbjct: 361 RTKTVV 366

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score =  274 bits (704), Expect = 1e-86
 Identities = 137/429 (31%), Positives = 205/429 (47%), Gaps = 30/429 (6%)

Query: 87  SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYW 146
             E R  ++      + +  +E+ E +H +  KP  +  + E+        LAL+ + + 
Sbjct: 38  GVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGL-EVL-------LALEAIDWA 89

Query: 147 TK-------PEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 199
            +       P K  T L      A +   P GVV VIS WNYP L  +  +I A+AAGNA
Sbjct: 90  ARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNA 149

Query: 200 VVLKPSEIAPATSSLLAKLLEDYVDNSAV-RVVEGAVAETSALLEQKWDKILYTGSPRVG 258
           VVLKPSE+ P    LLA+          V +VV G  A  +AL++   DK+ +TGS   G
Sbjct: 150 VVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATG 209

Query: 259 RIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIIT 318
           R VMAAAA+ L PV+LELGGK P +V +  +L+      + G  M N GQ CI V+ +  
Sbjct: 210 RKVMAAAAERLIPVVLELGGKDPMIVLADADLERAAAAAVWGA-MVNAGQTCISVERVYV 268

Query: 319 TKDFAPKLIDSLRNELKEF-FGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD------ 371
            +    + +  L  + +    G + +   D    + P   AR   ++    V D      
Sbjct: 269 HESVYDEFVARLVAKARALRPGADDIGDAD----IGPMTTARQLDIV-RRHVDDAVAKGA 323

Query: 372 KIVYGGQRDEKQ-LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPK 430
           K + GG R         PT+L DVP D  +M+EE FGP+LP++ V   +++  +      
Sbjct: 324 KALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRY 383

Query: 431 PLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFD 490
            L+A  FS D    +   + + AG +  ND ++   + +LPFGGV +SG G  HG     
Sbjct: 384 GLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLR 443

Query: 491 AFSHKKAVL 499
            F   KA+ 
Sbjct: 444 EFCRPKAIA 452

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  271 bits (696), Expect = 2e-85
 Identities = 123/411 (29%), Positives = 202/411 (49%), Gaps = 21/411 (5%)

Query: 98  IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLT 157
            A+++EE+ +E+ E    +  KP  E    E+     + +      +        K    
Sbjct: 60  AADLLEERRDELAELETLETGKPLAEARG-EVPRAIDTLRYYAGLAR--------KLEGE 110

Query: 158 TYPSS----AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS 213
           T PS     A    EPLGVV  I+ WN+P LL+   +  A+AAGN VVLKPSE+ P T+ 
Sbjct: 111 TLPSDPGVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTAL 170

Query: 214 LLAKLLEDY-VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLT 270
           LLA+L E+  +    + VV G+ +E    L +    DK+ +TGS  VGR +  AAAK+L 
Sbjct: 171 LLAELFEEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLK 230

Query: 271 PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330
            V LELGGK+P +V    +L       + G +  N GQ C     ++  +    + ++ L
Sbjct: 231 RVTLELGGKNPLIVFDDADLDAAVEGAVFGAF-GNAGQVCTAGSRLLVHESIYDEFVERL 289

Query: 331 RNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQ-LKIA 387
               K     +P++   D+  +++     R+ S +++ K    K++ GG+   ++   + 
Sbjct: 290 VEAAKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVE 349

Query: 388 PTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEF 447
           PT+L DV  D  I +EEIFGP+L ++  +  +++ ++       LAA  F++D +     
Sbjct: 350 PTVLADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRV 409

Query: 448 VQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            + + AG +  ND        +LPFGG  +SG G   GK   + ++  K V
Sbjct: 410 ARRLEAGMVWINDYTTG-DPEALPFGGFKQSGFGREGGKEGLEEYTETKTV 459

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score =  221 bits (564), Expect = 7e-66
 Identities = 137/435 (31%), Positives = 211/435 (48%), Gaps = 24/435 (5%)

Query: 84  KTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL 143
              S+  R   ++S+   I E +EEI     +D  K   +  + EI +T    +  LK  
Sbjct: 35  AKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLKHG 94

Query: 144 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLK 203
           +   +PE     L  +   A +  EPLGVV  I +WNYPF   L P+I A+ AGNA+V+K
Sbjct: 95  EKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVK 154

Query: 204 PSEIAPATS----SLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQ-KWDKILYTGSPRV 257
            SE    +S    S++ + L     D   V++V        AL      D I + GSP V
Sbjct: 155 VSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPV 214

Query: 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM----ANNGQACIGV 313
           G+ VMAAAA+ LTPV+LELGGK PA+V    +L       IA   M     ++GQ CIG+
Sbjct: 215 GKKVMAAAAESLTPVVLELGGKDPAIVLDDADLDQ-----IASIIMRGTFQSSGQNCIGI 269

Query: 314 DYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD- 371
           + +I  +    KL++ L + ++      P++   D+  +++P  F RL  L+  D V   
Sbjct: 270 ERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELV-ADAVEKG 328

Query: 372 -KIVYGGQRDEKQLK-----IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVI 425
            +++ GG+R             PT+L+DV  D  I +EE+FGP++ ++     E++ ++ 
Sbjct: 329 ARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIA 388

Query: 426 KSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG 485
            S    L A  F  D +  +     +  G +  ND  V+  V  LPFGGV  SG G + G
Sbjct: 389 NSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAG 448

Query: 486 KFSFDAFSHKKAVLY 500
           +       + K+V  
Sbjct: 449 EEGLRGLCNPKSVTE 463

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score =  211 bits (540), Expect = 1e-62
 Identities = 117/348 (33%), Positives = 180/348 (51%), Gaps = 17/348 (4%)

Query: 161 SSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE 220
           + A ++ EP+GVVL I+ WN P +L    +   +AAGN VVLK SE++P T  L+ ++  
Sbjct: 90  TLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFH 149

Query: 221 DY-VDNSAVRVV----EGAVAETSALLEQKW-DKILYTGSPRVGRIVMAAAAKHLTPVIL 274
           +  +    + VV    E A     AL+      K+ +TGS RVGRI+   AAKHL PV+L
Sbjct: 150 EAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLL 209

Query: 275 ELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334
           ELGGK+PA+V    +L       + G ++ N+GQ C+  + II  +  A + ++ L+   
Sbjct: 210 ELGGKAPAIVLEDADLDAAANAALFGAFL-NSGQICMSTERIIVHESIADEFVEKLKAAA 268

Query: 335 KEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQ--LKIAPTI 390
           ++ F         L  +V+     R+  L+D D +S   K+V GG  DE      + PTI
Sbjct: 269 EKLFAG----PVVLGSLVSAAAADRVKELVD-DALSKGAKLVVGGLADESPSGTSMPPTI 323

Query: 391 LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQN 450
           L +V  D  I  EE FGP++ I+ V+  E++  +       L+A  F+ D        + 
Sbjct: 324 LDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKR 383

Query: 451 ISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
           I +G +  N   VH    +LP GGV  SG G ++GK+  D F+  K +
Sbjct: 384 IESGAVHINGMTVHDE-PTLPHGGVKSSGYGRFNGKWGIDEFTETKWI 430

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score =  201 bits (515), Expect = 4e-59
 Identities = 126/426 (29%), Positives = 204/426 (47%), Gaps = 54/426 (12%)

Query: 99  ANMIEEKEEEIIEAIHKDL-SKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLT 157
           A ++EE+ +EI + + ++  S  P   F  E+    +  + A        +PE       
Sbjct: 32  AEILEERRDEIADWLIRESGSTRPKAAF--EVGAAIAILREAAGLP---RRPEG-----E 81

Query: 158 TYPSSAE-----IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
             PS        +   PLGVV VIS +N+P +L++  V  A+A GNAVVLKP    P T 
Sbjct: 82  ILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTG 141

Query: 213 SLL-AKLLEDYVDNSA------VRVVEGAVAET-SALLE-QKWDKILYTGSPRVGRIVMA 263
            LL A++ E+     A      + VV G  +E   AL+E  +   I +TGS  VGR +  
Sbjct: 142 GLLIAEIFEE-----AGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGE 196

Query: 264 AAAKHLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
            A +HL  V LELGG +P +V  D+ ++L V       G ++ + GQ C+    I+  + 
Sbjct: 197 LAGRHLKKVALELGGNNPLIVLDDADLDLAV--SAAAFGAFL-HQGQICMAAGRILVHES 253

Query: 322 ----FAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIV 374
               F  KL+   +  L    G +P +    +  ++N     R+ +++ ED V+   +++
Sbjct: 254 VYDEFVEKLVAKAKA-LP--VG-DPRDPDTVIGPLINERQVDRVHAIV-EDAVAAGARLL 308

Query: 375 YGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAA 434
            GG  +   L   PT+L DV  D  I +EEIFGP+ P++  +  E++ ++       L+A
Sbjct: 309 TGGTYE--GLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSA 366

Query: 435 YFFSDDEQMKKEFVQNISAGGIVFNDTIVH--TTVSSLPFGGVGESGMGSYHGKFSFDAF 492
             F+ D +    F + +  G +  ND  V+    V   PFGGV  SG G + G  S + F
Sbjct: 367 AVFTRDLERAMAFAERLETGMVHINDQTVNDEPHV---PFGGVKASGGGRFGGPASLEEF 423

Query: 493 SHKKAV 498
           +  + +
Sbjct: 424 TEWQWI 429

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score =  196 bits (501), Expect = 8e-57
 Identities = 113/347 (32%), Positives = 175/347 (50%), Gaps = 23/347 (6%)

Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
           +I +P+GVV  I+ WN+P  +    +  A+AAG  VVLKP+E  P ++  LA+L E+  +
Sbjct: 113 VIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGL 172

Query: 224 DNSAVRVVEGAVAETS-ALLEQKWD----KILYTGSPRVGRIVMAAAAKHLTPVILELGG 278
               + VV G+ AE   AL          KI +TGS  VG+++MA AA  +  V LELGG
Sbjct: 173 PAGVLNVVTGSPAEIGEALCA---SPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGG 229

Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
            +P +V    +L       IA K   N GQ C+  + I   +    + ++ L   +K+  
Sbjct: 230 NAPFIVFDDADLDKAVDGAIASK-FRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLK 288

Query: 339 GKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQ-LKIAPTILLDV 394
             N ++   D+  ++N     ++ +L+ ED V+   K++ GG+R         PT+L DV
Sbjct: 289 VGNGLDEGTDMGPLINERAVEKVEALV-EDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDV 347

Query: 395 PDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKPLAAYFFSDDEQMKKEFVQNI 451
            DD  IM EE FGP+ PI+  +  +   +VI      P  LAAY F+ D        + +
Sbjct: 348 TDDMLIMNEETFGPVAPIIPFDTED---EVIARANDTPYGLAAYVFTRDLARAWRVAEAL 404

Query: 452 SAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            AG +  N  ++  + +  PFGGV ESG+G   GK   + +   K V
Sbjct: 405 EAGMVGINTGLI--SDAEAPFGGVKESGLGREGGKEGLEEYLETKYV 449

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score =  196 bits (499), Expect = 2e-56
 Identities = 141/463 (30%), Positives = 219/463 (47%), Gaps = 42/463 (9%)

Query: 55  AAEEKQMQRFDVEKAASLMKELRNNYNSRKTK-SYEWRMSQIQSIANMIEEKEEEI--IE 111
           AA E+     DV+KA   +K  R  + S  +K + E R   +  +A+++E+  + +  IE
Sbjct: 41  AAGEE-----DVDKA---VKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIE 92

Query: 112 AIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIISE 168
           A+  D  KP     + ++          +  ++Y   W    + KT  T+    A  + E
Sbjct: 93  AL--DSGKPYHSNALGDLDEI-------IAVIRYYAGWADKIQGKTIPTSPNKLAYTLHE 143

Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSA 227
           P GV   I  WNYP  ++   +  A+AAGN VV+KP+E  P +    A L+++       
Sbjct: 144 PYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGV 203

Query: 228 VRVVEGAVAET-SALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
           V ++ G  A   SAL E    DKI +TGS   GR+VM AAA++L  V LE GGKSPA+V 
Sbjct: 204 VNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAVTLECGGKSPALVF 263

Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMES 345
              +L    +   AG  M N+GQ C     I   +    K ++     +K+ +       
Sbjct: 264 EDADLDQAVKWAAAG-IMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFD 322

Query: 346 KDLSR--IVNPFHFARLASLLDEDKVS-DKIVYGG----QRDEKQLKIAPTILLDVPDDS 398
            D      V+   + R+ S +++ K    K+VYGG    +   K   I PTI  DVP D 
Sbjct: 323 DDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDM 382

Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKPLAAYFFSDDEQMKKEFVQNISAGG 455
            I+KEEIFG   P+V + K +   + IK        LAA  F+ D +      + + AG 
Sbjct: 383 RIVKEEIFG---PVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGM 439

Query: 456 IVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
           +  N +  + +   +PFGG   SG+G   G++  + ++  KAV
Sbjct: 440 VWINSS--NDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAV 480

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score =  194 bits (495), Expect = 3e-56
 Identities = 104/355 (29%), Positives = 170/355 (47%), Gaps = 20/355 (5%)

Query: 157 TTYPSSAE-----IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPAT 211
            T PS +       +  PLGVV  I+ +NYP +L+   V  A+AAGN VVLKPSE  P  
Sbjct: 102 ETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVI 161

Query: 212 SSLLAKLLEDY-VDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKH 268
              +A+++E+  +      VV G  AE    L  + +   + +TGS  VGR +   A +H
Sbjct: 162 GLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRH 221

Query: 269 LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLID 328
           L  + LELGGK+P +V +  +L    R    G +M + GQ C+    II  +    + + 
Sbjct: 222 LKKITLELGGKNPLIVLADADLDYAVRAAAFGAFM-HQGQICMSASRIIVEEPVYDEFVK 280

Query: 329 SLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD---EDKVSD--KIVYGGQRDEKQ 383
                  +    +P   +D   ++ P    R    +    ED V+   K++ GG+ D   
Sbjct: 281 KFVARASKLKVGDP---RDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYD--G 335

Query: 384 LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQM 443
               PT+L DV  D  I +EE FGP+  ++  +  E++ ++       L+A   ++D Q 
Sbjct: 336 NFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQR 395

Query: 444 KKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
             +  + + +G +  ND  +    + +PFGGV  SG G   G++S + F+  K +
Sbjct: 396 AFKLAERLESGMVHINDPTILDE-AHVPFGGVKASGFGREGGEWSMEEFTELKWI 449

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score =  190 bits (484), Expect = 1e-54
 Identities = 130/424 (30%), Positives = 219/424 (51%), Gaps = 26/424 (6%)

Query: 91  RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
           R   +  +A +IE ++EE+ + +  ++ KP  ++ + E+  T    KLA +E K      
Sbjct: 45  RYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV-EVERTIRLFKLAAEEAK---VLR 100

Query: 151 KAKTSLTTYPSS----AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE 206
                +  Y  +    A  + EP+GVV  I+ +N+P  L    +  AIA GN+VV+KPS 
Sbjct: 101 GETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSS 160

Query: 207 IAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMA 263
             P T+  LAK+LE+  +    + VV G  +E    +    K + I +TGS  VG ++ +
Sbjct: 161 NTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIAS 220

Query: 264 AAAKHLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
            A      V LELGG  P +V  D+ +   V+    + G++  N GQ C  V  I+  ++
Sbjct: 221 KAGGTGKKVALELGGSDPMIVLKDADLERAVSI--AVRGRFE-NAGQVCNAVKRILVEEE 277

Query: 322 FAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQ 378
              K +  L  ++K+    +P+ ES DL  +++P    R+ +L++ D V    KI+YGG+
Sbjct: 278 VYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVN-DAVEKGGKILYGGK 336

Query: 379 RDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFS 438
           RDE      PT+L +   D  +MKEE+FGP+LPI  V+  E++ ++  S    L A  F+
Sbjct: 337 RDEGSF-FPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFT 395

Query: 439 DDEQMKKEFVQNISAGGIVFNDTIVHTTV--SSLPFGGVGESGMGSYHGKFSFDAFSHKK 496
           +D     +  + + AGG+V ND+   T     +LPFGG  +SG+G    +++    + +K
Sbjct: 396 NDINRALKVARELEAGGVVINDS---TRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEK 452

Query: 497 AVLY 500
            ++ 
Sbjct: 453 TIVI 456

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score =  188 bits (480), Expect = 6e-54
 Identities = 122/445 (27%), Positives = 214/445 (48%), Gaps = 22/445 (4%)

Query: 63  RFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF 122
           R D E+A +  +    N   R    +E RM+ ++  A++++++ EE  + I  +  KP  
Sbjct: 20  RADAEEALATARAGAEN--RRALPPHE-RMAILERAADLLKKRAEEFAKIIACEGGKPIK 76

Query: 123 ETFISEISMTKSSCKLALKELKYW---TKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179
           +  + E+     + +LA +E +       P  A          A  I EP+GVVL I+ +
Sbjct: 77  DARV-EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDN--RLAWTIREPVGVVLAITPF 133

Query: 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAET 238
           N+P  L    +  AIA G  VVLKP+   P ++  LAK+L E  V    ++VV G     
Sbjct: 134 NFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGEREVL 193

Query: 239 SALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRR 296
                 +++   + +TGS  VG  + A A      + LELGG +P +VD   +L      
Sbjct: 194 GDAFAADERVAMLSFTGSAAVGEALRANAGG--KRIALELGGNAPVIVDRDADLDAAIEA 251

Query: 297 IIAGK-WMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNP 354
           +  G  + A  GQ CI V  I   ++   + I++    +K+    +P++   D+  +++ 
Sbjct: 252 LAKGGFYHA--GQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISE 309

Query: 355 FHFARLASLLDED-KVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413
               R+   ++E  +   +++ GG+RD    K  PT+L DVP D+ +  EE FGP++PI+
Sbjct: 310 EAAERVERWVEEAVEAGARLLCGGERDGALFK--PTVLEDVPRDTKLSTEETFGPVVPII 367

Query: 414 TVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFG 473
             +  E++  +  S    L A  F+ D  +  +  + +  GG++ ND+        +PFG
Sbjct: 368 RYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDS-SAFRTDWMPFG 426

Query: 474 GVGESGMGSYHGKFSFDAFSHKKAV 498
           GV ESG+G     ++ +  + +K V
Sbjct: 427 GVKESGVGREGVPYAMEEMTEEKTV 451

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score =  187 bits (477), Expect = 2e-53
 Identities = 109/369 (29%), Positives = 174/369 (47%), Gaps = 43/369 (11%)

Query: 157 TTYPSSAEIIS----EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
            +YP     ++    +P+GV  +I+ WN P +L    +  A+A GN VVLKPSE  P T+
Sbjct: 101 ESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTA 160

Query: 213 SLLAKLLEDY-----VDNSAVRVVEGAVAET-SALLEQK-WDKILYTGSPRVGRIVMAAA 265
            LLA+L  +      V N    VV G   E  +AL+     D I +TG    GR +M AA
Sbjct: 161 WLLAELANEAGLPPGVVN----VVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAA 216

Query: 266 AKHLTPVILELGGKSPAVV----DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
           A +L PV LELGGK+P +V    D    +    R        +NNG+ C+    I+  + 
Sbjct: 217 APNLKPVSLELGGKNPNIVFADADLDRAVDAAVRSS-----FSNNGEVCLAGSRILVQRS 271

Query: 322 FAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLD---EDKVSDKIVYGG 377
              + ++      K     +P+    ++  +++  H  ++   ++    +     I+ GG
Sbjct: 272 IYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAE--GATILTGG 329

Query: 378 QRDE-KQLK----IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKP 429
            R E   L+    + PT++  + +DS + +EEIFG   P+VTV   +D  + I+     P
Sbjct: 330 GRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFG---PVVTVIPFDDEEEAIELANDTP 386

Query: 430 KPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF 489
             LAAY ++ D        + + AG +  N  +V       PFGGV  SG+G   G +S 
Sbjct: 387 YGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDL--RTPFGGVKASGIGREGGDYSL 444

Query: 490 DAFSHKKAV 498
           + ++  K V
Sbjct: 445 EFYTELKNV 453

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  187 bits (476), Expect = 3e-53
 Identities = 132/436 (30%), Positives = 213/436 (48%), Gaps = 42/436 (9%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           DVEKA +  KE       +   +YE R   ++  A ++EE+ EE    I  +  KP  + 
Sbjct: 22  DVEKAIAAAKEGAKEM--KSLPAYE-RAEILERAAQLLEERREEFARTIALEAGKPIKDA 78

Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLT--TYPSSAE---------IISEPLGVV 173
              E+     + +L+          E+AK  L   T P  A           I EP+GVV
Sbjct: 79  -RKEVDRAIETLRLS---------AEEAKR-LAGETIPFDASPGGEGRIGFTIREPIGVV 127

Query: 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED-YVDNSAVRVVE 232
             I+ +N+P  L    V  AIAAGNAVVLKP+   P ++  LA+LL +  +   A+ VV 
Sbjct: 128 AAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVT 187

Query: 233 GAVAET-SALLE-QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINL 290
           G+      AL+   +   I +TGSP VG  +   A   L  V LELG  +  +VD+  +L
Sbjct: 188 GSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVIVDADADL 245

Query: 291 QVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLS 349
           +    R ++G + AN GQ CI V  I   +D   + ++      K+    +P+ E  D+ 
Sbjct: 246 EKAVERCVSGAF-ANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVG 304

Query: 350 RIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFG 407
            +++     R+   ++E  V    +++ GG+RD   L   PT+L DVP D  ++ EE+F 
Sbjct: 305 PMISEAEAERIEEWVEE-AVEGGARLLTGGKRDGAIL--EPTVLTDVPPDMKVVCEEVFA 361

Query: 408 PLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTT- 466
           P++ +   + ++++  +    P  L A  F++D Q   +  + +  GG++ ND+   +T 
Sbjct: 362 PVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDS---STF 418

Query: 467 -VSSLPFGGVGESGMG 481
            V  +P+GGV ESG G
Sbjct: 419 RVDHMPYGGVKESGTG 434

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score =  186 bits (474), Expect = 4e-53
 Identities = 106/364 (29%), Positives = 164/364 (45%), Gaps = 29/364 (7%)

Query: 157 TTYPSSAEIIS----EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
            T P   ++++    EPLGVV  I  WN P +L+   +  A+ AGN VVLK +E AP   
Sbjct: 101 ETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAV 160

Query: 213 SLLAKLLEDYVDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLT 270
            LLA++L   +    + V+ G   E  A L      DK+ +TGS  VG+I+  AAA  L 
Sbjct: 161 LLLAEILAQVLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLI 220

Query: 271 PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330
           PV LELGGKSP +V    +L       IAG      GQ+C     +   +D     ++ L
Sbjct: 221 PVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKL 280

Query: 331 RNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQ-----RDEK 382
             +L +    +P+ E+ D+  I++   FA++   +D    +    ++ GG          
Sbjct: 281 VAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLAD 340

Query: 383 QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKS---KPKPLAAYFFSD 439
              + PTI   V ++  + +EEIFG   P++     +D  +VI         LAAY ++ 
Sbjct: 341 GFFVQPTIFSGVDNEWRLAREEIFG---PVLCAIPWKDEDEVIAMANDSHYGLAAYVWTR 397

Query: 440 DEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDA----FSHK 495
           D          + AG +  N            +GG  +SG+G    + S +     F+ K
Sbjct: 398 DLGRALRAAHALEAGWVQVNQG--GGQQPGQSYGGFKQSGLGR---EASLEGMLEHFTQK 452

Query: 496 KAVL 499
           K V 
Sbjct: 453 KTVN 456

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score =  185 bits (472), Expect = 8e-53
 Identities = 106/421 (25%), Positives = 183/421 (43%), Gaps = 26/421 (6%)

Query: 91  RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
           R   +  +A+ IEE  EE+     ++  KP       E+         A+   +++    
Sbjct: 43  RSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDELP-------GAVDNFRFFAGAA 95

Query: 151 KAKTSLTTYPSSAE--------IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 202
           +        P++ E        I  EP+GVV  I+ WNYP +++   +  A+AAGN VVL
Sbjct: 96  RTLEG----PAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVL 151

Query: 203 KPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRI 260
           KPSE  P T+ LLA+L  + +    V VV G  A     L    +   +  TGS R G+ 
Sbjct: 152 KPSETTPLTTLLLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKK 211

Query: 261 VMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320
           V  AAA  L  V LELGGK+P +V    +L      I    +  N GQ C     +   +
Sbjct: 212 VARAAADTLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGY-YNAGQDCTAACRVYVHE 270

Query: 321 DFAPKLIDSLRNELKEF-FGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQR 379
               + + +L   +     G    E  ++  + +     R+A  ++      +++ GG+R
Sbjct: 271 SVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAPAHARVLTGGRR 330

Query: 380 -DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFS 438
            +       PT++  V  D  I++EEIFGP++ +   +  +++ ++       LA+  ++
Sbjct: 331 AEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWT 390

Query: 439 DDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            D          +  G +  N  I     + +P GG  +SG G     ++ + ++  K V
Sbjct: 391 RDVGRAMRLSARLDFGTVWVNTHIPLA--AEMPHGGFKQSGYGKDLSIYALEDYTRIKHV 448

Query: 499 L 499
           +
Sbjct: 449 M 449

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score =  182 bits (465), Expect = 9e-52
 Identities = 101/341 (29%), Positives = 172/341 (50%), Gaps = 10/341 (2%)

Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYV 223
           ++ EP+GVV +I+ WN+PFL+    +  A+AAG  VV+KPSE    T+ +LA+LL E  +
Sbjct: 115 VLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGL 174

Query: 224 DNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
               V +V G  A     +      D + +TGS RVG+ + AAAA++L  V LELGGK+P
Sbjct: 175 PAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNP 234

Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
            +V +  +L      ++ G +  N G+ C     ++  +  A   + ++    ++    +
Sbjct: 235 QIVFADADLDAAADAVVFGVYF-NAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGD 293

Query: 342 PM-ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE--KQLKIAPTILLDVPDD 397
           P+     +  I+N    A++   +D  +     ++ GG+R      L   PTI  DV  D
Sbjct: 294 PLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPD 353

Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
             I +EEIFGP+L ++T + ++++  +       L+A  +S D        + I AG + 
Sbjct: 354 MAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVW 413

Query: 458 FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            N  +       LPFGG  +SG+G   G++  + ++  K V
Sbjct: 414 VNTFL--DGSPELPFGGFKQSGIGRELGRYGVEEYTELKTV 452

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score =  180 bits (460), Expect = 6e-51
 Identities = 107/367 (29%), Positives = 166/367 (45%), Gaps = 35/367 (9%)

Query: 154 TSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS 213
            +L   P    +  EP+GVV  I+ WN+PF L+L  +  A+AAGN VVLKP+   P ++ 
Sbjct: 108 PALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSAL 167

Query: 214 LLAKLLEDYVDNSA--VRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHL 269
           LL +++ +  D  A  V VV G+       L  + + D + +TGS  VGR +MA AA  L
Sbjct: 168 LLGEIIAE-TDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATL 226

Query: 270 TPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDS 329
             V+LELGGKS  +V    +L       +    M N GQ C      +TT+   P    S
Sbjct: 227 KRVLLELGGKSANIVLDDADLAAAAPAAVGV-CMHNAGQGC-----ALTTRLLVP---RS 277

Query: 330 LRNE----LKEFFGK----NPMESKDLSRIVNPF----HFARLASLLDEDKVSD-KIVYG 376
             +E    L   F      +P    D   ++ P        R+   +   +    ++V G
Sbjct: 278 RYDEVVEALAAAFEALPVGDPA---DPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTG 334

Query: 377 GQRDEKQLK---IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLA 433
           G R     K   + PT+  DV +D  I +EEIFGP+L ++  +  +++  +       L+
Sbjct: 335 GGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLS 394

Query: 434 AYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS 493
              +S D        + I  G +  N         + PFGG  +SG+G  +G    + F 
Sbjct: 395 GGVWSADVDRAYRVARRIRTGSVGIN-GGGGYGPDA-PFGGYKQSGLGRENGIEGLEEFL 452

Query: 494 HKKAVLY 500
             K++ Y
Sbjct: 453 ETKSIAY 459

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score =  178 bits (455), Expect = 2e-50
 Identities = 113/453 (24%), Positives = 188/453 (41%), Gaps = 71/453 (15%)

Query: 80  YNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLA 139
           + + +  S+  R + ++ +A+++ E+++E+   I  ++ KP  E   +E+      C+  
Sbjct: 12  FLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEA-RAEVEKCAWICRYY 70

Query: 140 LKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 199
            +  + +   E  +T        A +  EPLGVVL I  WN+PF          + AGN 
Sbjct: 71  AENAEAFLADEPIETDA----GKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNT 126

Query: 200 VVLKPSEIAPATSSLLAKLLED-----------YVDNSAV-------RVVEGAVAETSAL 241
           V+LK +   P  +  + +L  +            +D+  V       RV    V      
Sbjct: 127 VLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIADPRVR--GVT----- 179

Query: 242 LEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGK 301
                     TGS R GR V A A K+L   +LELGG  P +V    +L    +  + G+
Sbjct: 180 ---------LTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGR 230

Query: 302 WMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKD----LSRIVNPFHF 357
            + N GQ+CI     I  +D   + ++     +      +PM+       L+R       
Sbjct: 231 -LQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLAR------- 282

Query: 358 ARLASLLDE--DKVSD------KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGP 408
                L DE  ++V +       ++ GG+R D       PT+L DV        EE+FGP
Sbjct: 283 ---KDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGP 339

Query: 409 LLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVS 468
           +  ++ V+  E++  +    P  L    F+ D +  +   + + AG +  N       V 
Sbjct: 340 VAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFING-----MVK 394

Query: 469 S---LPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
           S   LPFGGV  SG G   G+F    F + K V
Sbjct: 395 SDPRLPFGGVKRSGYGRELGRFGIREFVNIKTV 427

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score =  176 bits (449), Expect = 2e-49
 Identities = 127/449 (28%), Positives = 220/449 (48%), Gaps = 32/449 (7%)

Query: 68  KAASLMKELRNNYNSRKTKSYEW-------RMSQIQSIANMIEEKEEEIIEAIHKDL--- 117
            AAS  +++   Y +      EW       R   ++  A ++EE+ +EI+E + ++    
Sbjct: 27  PAASK-EDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGST 85

Query: 118 -SKPPFETFISEISMTKSSCKLALK-ELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLV 175
             K   E + + +++T+ +    L+ E +        K +         +  EPLGVV V
Sbjct: 86  RIKANIE-WGAAMAITREAATFPLRMEGRILPSDVPGKEN--------RVYREPLGVVGV 136

Query: 176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLL-AKLLEDY-VDNSAVRVVEG 233
           IS WN+P  LS+  V  A+A GNAVVLKP+   P T  LL AK+ E+  +    + VV G
Sbjct: 137 ISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVG 196

Query: 234 AVAET-SALLEQKWDK-ILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQ 291
           A +E   A +E    + I +TGS  VGR +   A +HL  V LELGG +P VV    ++ 
Sbjct: 197 AGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALELGGNNPFVVLEDADID 256

Query: 292 VTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDL-SR 350
                 + GK++ + GQ C+ ++ II  +D   + ++     +K     +P +   +   
Sbjct: 257 AAVNAAVFGKFL-HQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGP 315

Query: 351 IVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPL 409
           ++N      L   +++       ++ GG+ +     + PT+L DV +D  I +EEIFGP+
Sbjct: 316 LINESQVDGLLDKIEQAVEEGATLLVGGEAEG--NVLEPTVLSDVTNDMEIAREEIFGPV 373

Query: 410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSS 469
            PI+  +  E++ ++       L+   F+ D +   +F + I AG    ND  V+     
Sbjct: 374 APIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDE-PH 432

Query: 470 LPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
           +PFGG   SG+G ++G+++ + F+  K +
Sbjct: 433 VPFGGEKNSGLGRFNGEWALEEFTTDKWI 461

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score =  175 bits (445), Expect = 6e-49
 Identities = 109/410 (26%), Positives = 183/410 (44%), Gaps = 19/410 (4%)

Query: 98  IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKAKT 154
           +A +I    +E+      D  KP       ++     +        +Y   W    + + 
Sbjct: 50  LAELILANADELARLESLDTGKPIRAARRLDVPRAADT-------FRYYAGWADKIEGEV 102

Query: 155 SLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL 214
                P     + EP+GVV  I  WN+P + +   V  A+AAGN VVLKP+E+ P ++  
Sbjct: 103 IPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALR 162

Query: 215 LAKLLEDY-VDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTP 271
           +A+L+ +       + VV G      A L      DKI +TGS  VGR +M  AA +L  
Sbjct: 163 IAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKR 222

Query: 272 VILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR 331
           V LELGGKS  +V +  +L    R    G +  N GQ C     ++  +    + ++   
Sbjct: 223 VSLELGGKSANIVFADADLDAAVRAAATGIFY-NQGQMCTAGSRLLVHESIYDEFLERFT 281

Query: 332 NELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRD-EKQLKIAP 388
           +  +     +P++ K  +  +V+   F R+   +D  +    +++ GG+R   +   + P
Sbjct: 282 SLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEP 341

Query: 389 TILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFV 448
           TI   VP +  I +EEIFGP++ ++     E++  +       LAA  ++ D        
Sbjct: 342 TIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVA 401

Query: 449 QNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
             + AG +  N T       S PFGG  +SG G   G+ + D ++  K+V
Sbjct: 402 AALKAGTVWIN-TYNRFDPGS-PFGGYKQSGFGREMGREALDEYTEVKSV 449

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score =  171 bits (437), Expect = 8e-48
 Identities = 110/422 (26%), Positives = 187/422 (44%), Gaps = 26/422 (6%)

Query: 87  SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISM----TKSSCKLALKE 142
             E R + + +IA+ IE   EE+   +  +  KP  E    E+       + +  L L +
Sbjct: 39  PLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEA-QFEVGGAVAWLRYTASLDLPD 97

Query: 143 LKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 202
                   +            E+  +PLGVV  I  WN+P LL+   +  A+ AGN VVL
Sbjct: 98  EVIEDDDTR----------RVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVL 147

Query: 203 KPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRI 260
           KPS   P  +  L +L ++ +    + VV G   E    L       KI +TGS   G+ 
Sbjct: 148 KPSPFTPLCTLKLGELAQEVLPPGVLNVVSGG-DELGPALTSHPDIRKISFTGSTATGKK 206

Query: 261 VMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320
           VMA+AAK L  V LELGG   A+V   +++     ++  G ++ N+GQ C  +  +   +
Sbjct: 207 VMASAAKTLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFI-NSGQVCAAIKRLYVHE 265

Query: 321 DFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQ 378
               +  ++L    K     + ++    L  + N   + ++  L+++ K    K++ GG+
Sbjct: 266 SIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGE 325

Query: 379 RDEKQ-LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFF 437
             +     I PTI+ D P+ S I+ EE FGP+LP++     ++           L A  +
Sbjct: 326 PLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVW 385

Query: 438 SDDEQMKKEFVQNISAGGIVFNDTIVHTTVS-SLPFGGVGESGMGSYHGKFSFDAFSHKK 496
           S D +  +   + + AG +  N    H  +    PFGG  +SG+G   G      ++  +
Sbjct: 386 SSDLERAEAVARRLEAGTVWINT---HGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQ 442

Query: 497 AV 498
            +
Sbjct: 443 VI 444

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score =  169 bits (431), Expect = 6e-47
 Identities = 110/343 (32%), Positives = 167/343 (48%), Gaps = 18/343 (5%)

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNS 226
           EP GV   I  WNYP  ++   V  A+AAGNAVV+KP+E AP T+  LA+L E+  +   
Sbjct: 116 EPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAG 175

Query: 227 AVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284
           A+ VV G  AE  A L      D I +TGS   G  VM AAA+++ PV LELGGKSP +V
Sbjct: 176 ALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIV 235

Query: 285 DSTINLQ----VTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
            +  +L+    V    II      N GQ C     ++  +    ++++ L    +     
Sbjct: 236 FADADLEAALPVVVNAII-----QNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVG 290

Query: 341 NPMESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQLK----IAPTILLDVP 395
             +E  DL  +++     R+   +   +    +IV GG+  E        +APT+L DVP
Sbjct: 291 PGLEDPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVP 350

Query: 396 DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGG 455
            DS + +EEIFGP+L ++  +   ++  +       L A  ++ D        + + AG 
Sbjct: 351 PDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQ 410

Query: 456 IVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
           +  N+      +  LPFGGV +SG G   G  +   ++  K V
Sbjct: 411 VFVNNYGAGGGI-ELPFGGVKKSGHGREKGLEALYNYTQTKTV 452

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score =  169 bits (431), Expect = 6e-47
 Identities = 115/362 (31%), Positives = 171/362 (47%), Gaps = 55/362 (15%)

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNS 226
           EPLGV   I  WNYP  ++      A+A GNA+V KPS   P T+ LLA++L E  + + 
Sbjct: 115 EPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDG 174

Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284
              VV+G   ET  LL +  D  K+ +TGS   G+ VM+AAAK +  V LELGGKSP ++
Sbjct: 175 VFNVVQGG-GETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLII 233

Query: 285 --DSTINLQVTTRRIIAGKWMAN---NGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
             D+ +   V       G  MAN    GQ C        T+ F  + I        EF  
Sbjct: 234 FDDADLENAVN------GAMMANFLSQGQVCSN-----GTRVFVQRSI------KDEFTE 276

Query: 340 KNPMESKDLSRIVNPF-------------HFARLASLLDEDKVSD-KIVYGGQR--DEKQ 383
           +    +K + RI +P              H  ++   ++  K    K++ GG+R   E  
Sbjct: 277 RLVERTKKI-RIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDG 335

Query: 384 LK----IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSD 439
           L+    ++P +L D  DD TI++EEIFGP++ I+  +  E+           LAA  F+ 
Sbjct: 336 LENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTR 395

Query: 440 DEQMKKEFVQNISAGGI---VFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKK 496
           D Q     +  + AG      +N + V      +PFGG  +SG G  +G  + + ++  K
Sbjct: 396 DLQRAHRVIAQLQAGTCWINTYNISPV-----EVPFGGYKQSGFGRENGTAALEHYTQLK 450

Query: 497 AV 498
            V
Sbjct: 451 TV 452

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score =  169 bits (431), Expect = 6e-47
 Identities = 94/373 (25%), Positives = 163/373 (43%), Gaps = 22/373 (5%)

Query: 136 CKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIA 195
             +A + L         K     Y     I  EPLGVVL+I+ WNYP+L +++ VI A+ 
Sbjct: 90  ISIAEEALA--DIRVPEKDGFERY-----IRREPLGVVLIIAPWNYPYLTAVNAVIPALL 142

Query: 196 AGNAVVLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALLEQK-WDKILYTG 253
           AGNAV+LK S   P      A    E  +     +V+  +   ++AL+     D + +TG
Sbjct: 143 AGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTG 202

Query: 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGV 313
           S   GR +  AAA     V LELGGK PA V    +L      ++ G    N+GQ+C  +
Sbjct: 203 SVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGA-FFNSGQSCCSI 261

Query: 314 DYIITTKDFAPKLIDSLRNELKEF-FGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD- 371
           + I   +      +++    +K +  G     S  L  +V+      + + +  D ++  
Sbjct: 262 ERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIA-DAIAKG 320

Query: 372 -KIVYGGQR----DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK 426
            + +  G            +APT+L +V     +M+EE FGP++ I+ V+   ++  ++ 
Sbjct: 321 ARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMN 380

Query: 427 SKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVS-SLPFGGVGESGMGSYHG 485
                L A  ++ D    +   + +  G +  N       +  +L + GV +SG G    
Sbjct: 381 DSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDY---LDPALAWTGVKDSGRGVTLS 437

Query: 486 KFSFDAFSHKKAV 498
           +  +D  +  K+ 
Sbjct: 438 RLGYDQLTRPKSY 450

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score =  169 bits (431), Expect = 8e-47
 Identities = 109/347 (31%), Positives = 170/347 (48%), Gaps = 25/347 (7%)

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE-----DY 222
           EPLGVV  I+ WN P LL    +  A+AAGN VVLKPSE  PA++  LAKL E       
Sbjct: 118 EPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPG 177

Query: 223 VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKS 280
           V N    VV G   ET   L +     KI +TG    GR +  AAA++L PV LELGGKS
Sbjct: 178 VVN----VVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKS 233

Query: 281 PAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
           P +V    +L      ++AG + A  GQ C+    ++  +    + ++ L    +     
Sbjct: 234 PNIVFDDADLDAAVNGVVAGIF-AAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVG 292

Query: 341 NPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQR-DEKQLK----IAPTILL 392
           +P++ +  +  +       ++   +      +  +++ GG+R     L       PTIL 
Sbjct: 293 DPLDPETQMGPLATERQLEKVERYVA-RAREEGARVLTGGERPSGADLGAGYFFEPTILA 351

Query: 393 DVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNIS 452
           DV +D  I +EE+FGP+L ++  +  E++  +       LAA  ++ D        + I 
Sbjct: 352 DVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIE 411

Query: 453 AGGIVFNDTIVHTTVS-SLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
           A G V+ +T  +  +S S PFGG  +SG+G  +G  +   ++  K+V
Sbjct: 412 A-GTVWVNT--YRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSV 455

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score =  167 bits (424), Expect = 5e-46
 Identities = 125/426 (29%), Positives = 196/426 (46%), Gaps = 30/426 (7%)

Query: 91  RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTK-SSCKLALKELKYWT-- 147
           R   +++IA  + E+ EE+ E   +D  KP  E   +   +   + C       +Y+   
Sbjct: 43  RAKYLRAIAEGVRERREELAELEARDNGKPLDE---AAWDVDDVAGC------FEYYADL 93

Query: 148 --KPEKAKTSLTTYPS---SAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 202
             + +         PS    A +  EP+GVV +I+ WN+P L++   V  A+AAG  VVL
Sbjct: 94  AEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVL 153

Query: 203 KPSEIAPATSSLLAKL-LEDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGR 259
           KPSE+   T   LA++  E  +    + VV G   E  A L      DKI +TGS   G 
Sbjct: 154 KPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGS 213

Query: 260 IVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGK-WMANNGQACIGVDYIIT 318
            VM AAA+ + PV LELGGKSP +V    +L+      + G  W  NNGQ C     ++ 
Sbjct: 214 QVMQAAAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFW--NNGQICSATSRLLV 271

Query: 319 TKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYG 376
            +  A   ++ L    +     +P+E    L  +V+   + ++ S +   K    +++ G
Sbjct: 272 HESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCG 331

Query: 377 GQRDEKQLK---IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLA 433
           G+R     K   IAPT+  DVP DS I +EEIFGP+L + +    +++  +       LA
Sbjct: 332 GRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLA 391

Query: 434 AYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS 493
           A   S D +      + + AG +  N           P+GG   SG+G   G++  D + 
Sbjct: 392 AAVISRDAERCDRVAEALEAGIVWIN--CSQPCFPQAPWGGYKRSGIGRELGEWGLDNYL 449

Query: 494 HKKAVL 499
             K + 
Sbjct: 450 EVKQIT 455

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score =  166 bits (424), Expect = 7e-46
 Identities = 109/421 (25%), Positives = 194/421 (46%), Gaps = 35/421 (8%)

Query: 95  IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKT 154
           ++ IA   E + +E+ +AI  ++  P      +++ +     + A   LK +        
Sbjct: 64  LERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDF-------- 115

Query: 155 SLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL 214
                  ++ ++ EP+GV  +I+ WN+P    +  V  A+AAG  VVLKPSE+AP ++ +
Sbjct: 116 EFEERRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAII 175

Query: 215 LAKLLEDY-----VDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAK 267
           LA++L++      V N    +V G        L      D + +TGS R G+ V  AAA 
Sbjct: 176 LAEILDEAGLPAGVFN----LVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD 231

Query: 268 HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLI 327
            +  V LELGGKS  ++    +L+    R +A    AN+GQ+C     ++  +    +  
Sbjct: 232 TVKRVALELGGKSANIILDDADLEKAVPRGVAAC-FANSGQSCNAPTRMLVPRSRYAEAE 290

Query: 328 DSLRNELKEFFGKNPMESKD-LSRIVNPFHFARLASL----LDEDKVSDKIVYGG----Q 378
           +      + +   +P +    L  + +   F R+       ++E     ++V GG    +
Sbjct: 291 EIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEE---GARLVAGGPGRPE 347

Query: 379 RDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFS 438
             E+   + PT+  DV  D TI +EEIFGP+L I+  +  +++  +    P  LA Y +S
Sbjct: 348 GLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWS 407

Query: 439 DDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            D +  +   + + AG +  N    +      PFGG  +SG G   G++  + F   K++
Sbjct: 408 ADPERARAVARRLRAGQVHINGAAFN---PGAPFGGYKQSGNGREWGRYGLEEFLEVKSI 464

Query: 499 L 499
            
Sbjct: 465 Q 465

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score =  165 bits (420), Expect = 4e-45
 Identities = 108/341 (31%), Positives = 174/341 (51%), Gaps = 11/341 (3%)

Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL-LEDYV 223
           ++ +P+GVV  I+ WN+P  +    V  A+AAG  VV+KPSE+ P T+   A+L L+  +
Sbjct: 156 VLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGI 215

Query: 224 DNSAVRVVEG-AVAETSALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
               + VV G A     ALL   K  KI +TGS  VG+ +MA AA  +  V LELGG +P
Sbjct: 216 PPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAP 275

Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
            +V    +L V  +  +A K+  N+GQ C+  + I+  +    K  ++    +++    +
Sbjct: 276 FIVFDDADLDVAVKGALASKFR-NSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGD 334

Query: 342 PMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKI-APTILLDVPDD 397
             E       ++N     ++ S +  D VS   K++ GG+R         PT+L DV +D
Sbjct: 335 GFEEGVTQGPLINEAAVQKVESHVQ-DAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTED 393

Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
             I +EE+FGP+ P+   +  E++  +       LAAY F+ D Q      + +  G + 
Sbjct: 394 MLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVG 453

Query: 458 FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            N+ ++ T V+  PFGGV +SG+G    K+  D +   K V
Sbjct: 454 VNEGLISTEVA--PFGGVKQSGLGREGSKYGIDEYLEIKYV 492

Length = 498

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score =  164 bits (417), Expect = 8e-45
 Identities = 134/459 (29%), Positives = 207/459 (45%), Gaps = 47/459 (10%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEI--IEAIHKDLSKPPF 122
           DV+ A    +        RK    E R   +  +A++IE   +E+  +E++  D  KP  
Sbjct: 42  DVDAAVKAARAAFETGWWRKMDPRE-RGRLLNKLADLIERDRDELAALESL--DNGKP-- 96

Query: 123 ETFISEISMTKSSC-KLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVL 174
                 +  +      L++K L+Y   W      K    T P     ++    EP+GV  
Sbjct: 97  ------LEESAKGDVALSIKCLRYYAGWAD----KIQGKTIPIDGNFLAYTRREPIGVCG 146

Query: 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL-LEDYVDNSAVRVVEG 233
            I  WN+P L+    +  A+AAGN VVLKP+E  P ++  LA+L  E       V +V G
Sbjct: 147 QIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPG 206

Query: 234 --AVAETSALLEQ-KWDKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTIN 289
               A  +A+      DKI +TGS  VGR +M AAAK +L  V LELGGKSP +V    +
Sbjct: 207 FGPTA-GAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDAD 265

Query: 290 LQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDL- 348
           L         G +  N GQ C     I   +    + ++  +   ++    +P +     
Sbjct: 266 LDKAVEWAAFGIFF-NQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQ 324

Query: 349 SRIVNPFHFARLASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIF 406
              V+   F ++ S ++  K     ++ GG+R   K   I PT+  DV DD  I KEEIF
Sbjct: 325 GPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIF 384

Query: 407 GPLLPIVTVEKIEDSFDVIK---SKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDT-- 461
           G   P+VT+ K +   +VI+        LAA  F+ D        + + A G V+ +T  
Sbjct: 385 G---PVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKA-GTVWVNTYN 440

Query: 462 IVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
           +     +++PFGG  +SG G   G+   + ++  KAV  
Sbjct: 441 VFD---AAVPFGGFKQSGFGRELGEEGLEEYTQVKAVTI 476

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score =  163 bits (415), Expect = 1e-44
 Identities = 91/347 (26%), Positives = 164/347 (47%), Gaps = 22/347 (6%)

Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
           I   P+GVV  I  WN+PF L    +  A+  GN +V+KPSE  P  +   A+L+++  +
Sbjct: 129 IFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGL 188

Query: 224 DNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
               + +V G  +     L    K   I  TGS   G+ +M AAA+++T V LELGGK+P
Sbjct: 189 PAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSLELGGKAP 248

Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
           A+V    +L +  + I+  + + N GQ C   + +   +D   + ++ L  ++K     +
Sbjct: 249 AIVMKDADLDLAVKAIVDSR-IINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGD 307

Query: 342 PMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQ--LKIAPTILLDVPDD 397
           P ++  D+  +VN     ++  +++    +   ++ GG+R E +      PT+L +V  D
Sbjct: 308 PFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQD 367

Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
             I++EEIFGP+LP+V    ++++ ++       L +Y ++++          +  G   
Sbjct: 368 MEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETY 427

Query: 458 FNDTI------VHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            N          H         G  +SG+G   GK   + +   K V
Sbjct: 428 INRENFEAMQGFHA--------GWKKSGLGGADGKHGLEEYLQTKVV 466

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score =  162 bits (411), Expect = 4e-44
 Identities = 101/356 (28%), Positives = 168/356 (47%), Gaps = 33/356 (9%)

Query: 163 AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL-LED 221
           A I  EPLGVV  +  WN+P L++   +  A+AAGN+VVLKP+E +P T+  LA+L LE 
Sbjct: 118 ALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEA 177

Query: 222 YVDNSAVRVVEGAVAET-SAL-LEQKWDKILYTGSPRVGRIVMAAAAK-HLTPVILELGG 278
            +    + VV G       AL L    D + +TGS  VGR  +  + + +L  V LE GG
Sbjct: 178 GLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGG 237

Query: 279 KSPAVV-DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
           KSP +V     +L        AG +  N G+ C     ++  +    + ++ +    +E+
Sbjct: 238 KSPNIVFADAPDLDAAAEAAAAGIF-WNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREW 296

Query: 338 FGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQLK---IAPTILL 392
              +P++ +  +  +V+  HF ++   ++  K    ++V GG+R   +     + PT+  
Sbjct: 297 KPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFD 356

Query: 393 DVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD----EQMKKE-- 446
            V  D  I +EEIFGP+L ++T +  E++  +       LAA  ++ D     ++ +   
Sbjct: 357 GVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLR 416

Query: 447 ----FVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
               +V     G I        TT    PFGG  +SG G      + D ++  K  
Sbjct: 417 AGTVWVNCFDEGDI--------TT----PFGGFKQSGNGRDKSLHALDKYTELKTT 460

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score =  162 bits (412), Expect = 5e-44
 Identities = 111/428 (25%), Positives = 191/428 (44%), Gaps = 49/428 (11%)

Query: 98  IANMIEEKEEEIIEAIHKDLSKPPFETF--ISE-ISMTKSSCKLALKELKYWTKPEKAKT 154
            A ++++++EE+   + +++ KP  E    + E I M              +   E  + 
Sbjct: 68  AAELLKKRKEELARLVTREMGKPLAEGRGDVQEAIDMA------------QYAAGEGRRL 115

Query: 155 SLTTYPSS-----AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAP 209
              T PS      A    +P+GVV +I+ WN+P  +    +  A+  GN VV KP+E  P
Sbjct: 116 FGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTP 175

Query: 210 ATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAA 266
           A +  L +L  +  +    V VV G   E    L +    D + +TGS  VG  +    A
Sbjct: 176 ACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCA 235

Query: 267 KHLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMA--NNGQACIGVDYIITTKDF 322
           +    V LE+GGK+P +V  D+ ++L +         W A    GQ C     +I  +  
Sbjct: 236 RPNKRVALEMGGKNPIIVMDDADLDLALE-----GALWSAFGTTGQRCTATSRLIVHESV 290

Query: 323 APKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQR- 379
             + +       K     + ++ + D+  ++N     ++ +  +  K     ++ GG+R 
Sbjct: 291 YDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERL 350

Query: 380 ----DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAY 435
                EK   + PT+  DV  D  I +EEIFGP++ ++ V  +E++ ++       L++ 
Sbjct: 351 TGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSA 410

Query: 436 FFSDDEQMKKEFVQNISAG-GIVFNDTI---VHTTVSSLPFGGVGESGMGSYH-GKFSFD 490
            +++D        +++ AG   V   TI   VH     LPFGGV +SG G    G  + D
Sbjct: 411 IYTEDVNKAFRARRDLEAGITYVNAPTIGAEVH-----LPFGGVKKSGNGHREAGTTALD 465

Query: 491 AFSHKKAV 498
           AF+  KAV
Sbjct: 466 AFTEWKAV 473

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score =  161 bits (409), Expect = 7e-44
 Identities = 101/334 (30%), Positives = 157/334 (47%), Gaps = 14/334 (4%)

Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS-LLAKLLEDY-VDNS 226
           PLGVV VIS +N+P +L++  V  A+A GNAVVLKP    P +   ++A+L E+  +   
Sbjct: 110 PLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAG 169

Query: 227 AVRVVEGAVAETSALLE-QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
            + V+ G      AL+E      I +TGS  VGR V  AA +HL  V LELGGK+  +V 
Sbjct: 170 VLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVL 229

Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMES 345
              +L +       G ++ + GQ C+     +  +  A      L  + K     +P   
Sbjct: 230 DDADLDLAASNGAWGAFL-HQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATG 288

Query: 346 K-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPDDSTIMK 402
           +  L  ++N     R+ +++D D V+   ++  GG  D   L   PT+L  V        
Sbjct: 289 QVALGPLINARQLDRVHAIVD-DSVAAGARLEAGGTYD--GLFYRPTVLSGVKPGMPAFD 345

Query: 403 EEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFND-T 461
           EEIFGP+ P+   +  E++  +       L+A   S D          +  G +  ND T
Sbjct: 346 EEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQT 405

Query: 462 IVHTTVSSLPFGGVGESGMGSYHG-KFSFDAFSH 494
           +     +  PFGG+G SG GS  G   +++ F+ 
Sbjct: 406 VNDEPHN--PFGGMGASGNGSRFGGPANWEEFTQ 437

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score =  161 bits (410), Expect = 9e-44
 Identities = 118/420 (28%), Positives = 196/420 (46%), Gaps = 34/420 (8%)

Query: 98  IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTK-SSCKLALKELKYWTKPEKAKTSL 156
           IA+ I E  EE+      +  K   E   SEI +   ++C       +Y+      K + 
Sbjct: 68  IADKIREDAEELARLETLNTGKTLRE---SEIDIDDVANC------FRYYAG-LATKETG 117

Query: 157 TTYPSSAEIIS----EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
             Y     +IS    EP+GV  +I+ WNYP L +   +  A+AAGN VV+KPSE+ P T+
Sbjct: 118 EVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTT 177

Query: 213 SLLAKLLEDY-VDNSAVRVVEGAVAET-SALLEQK-WDKILYTGSPRVGRIVMAAAAKHL 269
             L +L+E+  +    V +V G+ A   + L E    D + +TG    GR +M AAA ++
Sbjct: 178 IALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNV 237

Query: 270 TPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDS 329
             V LELGGK+P +V +  + +    + + G +  N GQ C     ++  +    K + +
Sbjct: 238 KKVALELGGKNPNIVFADADFETAVDQALNGVF-FNAGQVCSAGSRLLVEESIHDKFVAA 296

Query: 330 LRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQR-DEKQLK- 385
           L    K+    N +    ++  +V+  H  ++ S +   K    ++V GG+R    +L  
Sbjct: 297 LAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAK 356

Query: 386 ---IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKPLAAYFFSD 439
              + PTI  DV     I++EEIFG   P++TVE+ +   + I+     P  LA   ++ 
Sbjct: 357 GYFVEPTIFDDVDRTMRIVQEEIFG---PVLTVERFDTEEEAIRLANDTPYGLAGAVWTK 413

Query: 440 DEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 499
           D        + + AG +  ND   H   +  P+GG  +SG+G   G    + +   K + 
Sbjct: 414 DIARANRVARRLRAGTVWIND--YHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHIN 471

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score =  161 bits (408), Expect = 1e-43
 Identities = 108/353 (30%), Positives = 167/353 (47%), Gaps = 25/353 (7%)

Query: 160 PSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL 219
           PS A  I EPLGV + I  WNYP  ++   +  A+AAGNA+V KPSE  P T+  +A+++
Sbjct: 124 PSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEIM 183

Query: 220 EDY-VDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILEL 276
           E+  +      VV+G  AE   LL       K+ +TG    G+ +MAAAA HL  V +EL
Sbjct: 184 EEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHVTMEL 243

Query: 277 GGKSPAVVDSTINLQVTTRRIIAGKWMAN---NGQACIGVDYIITTKDFAPKLIDSLRNE 333
           GGKSP +V    +L+      + G  + N    GQ C     +   K    + +  L   
Sbjct: 244 GGKSPLIVFDDADLESA----VDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVER 299

Query: 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQ-----LKI 386
            +     +P  E+ ++  +++  H  ++ S +++ K     +  GG R E         +
Sbjct: 300 TERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFV 359

Query: 387 APTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKP---LAAYFFSDDEQM 443
            PT+  D  DD TI++EEIFG   P++TV    D  +VI         LA   F+ D   
Sbjct: 360 EPTVFADCTDDMTIVREEIFG---PVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGR 416

Query: 444 KKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKK 496
                  + AG +  N    +   +  PFGG  +SG+G  +GK +   ++  K
Sbjct: 417 AHRVADQLEAGTVWINT--YNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score =  159 bits (403), Expect = 7e-43
 Identities = 108/374 (28%), Positives = 182/374 (48%), Gaps = 19/374 (5%)

Query: 143 LKY---WTKPEKAKTSLTTYPS------SAEIISEPLGVVLVISTWNYPFLLSLDPVIGA 193
           L+Y   W      +T   + PS      +A    EP+GVV  I  WN+  ++++  +  A
Sbjct: 107 LRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAA 166

Query: 194 IAAGNAVVLKPSEIAPATSSLLAKL-LEDYVDNSAVRVVEGAVAETSALLEQ-KWDKILY 251
           +A G  +V+KPSE  P T   +A+L  E  + +  + VV G  A  + L+      K+ +
Sbjct: 167 LATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSF 226

Query: 252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACI 311
           TGS   G+ +   AA  LT V LELGGK+ A      ++      ++   ++ + GQ C 
Sbjct: 227 TGSVATGKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFL-HQGQVCA 285

Query: 312 GVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVS 370
             +     +    +L+  L+  L  F   +PM ES     + N  HF ++ S LD+ +  
Sbjct: 286 APERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAE 345

Query: 371 -DKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSK 428
            D+IV GG+    +   + PT++L    DS +M+EE FGP++  V  E  E+   +I   
Sbjct: 346 GDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDT 405

Query: 429 PKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVS-SLPFGGVGESGMGSYHGKF 487
           P  L A  ++++      ++  I AG +  N   +HT +  ++PFGG+ +SG+G   G  
Sbjct: 406 PFGLTASVWTNNLSKALRYIPRIEAGTVWVN---MHTFLDPAVPFGGMKQSGIGREFGSA 462

Query: 488 SFDAFSHKKAVLYR 501
             D ++  K+V+ R
Sbjct: 463 FIDDYTELKSVMIR 476

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score =  157 bits (400), Expect = 2e-42
 Identities = 98/355 (27%), Positives = 170/355 (47%), Gaps = 16/355 (4%)

Query: 158 TYPSS-----AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
           T PS+      E   EPLGVV +I+ WN+P  +    +  A+A GN VV KP+E+ PA++
Sbjct: 119 TLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASA 178

Query: 213 SLLAKLLEDY-VDNSAVRVVEGAVAET-SALLEQK-WDKILYTGSPRVGRIVMAAAAKHL 269
             L ++LE+  +      +V G+ +E   AL+E    D + +TGS  VGR + AAAA   
Sbjct: 179 WALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARG 238

Query: 270 TPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDS 329
             V LE+GGK+P VV    +L +     + G    + GQ C     +I T+    + +++
Sbjct: 239 ARVQLEMGGKNPLVVLDDADLDLAVECAVQGA-FFSTGQRCTASSRLIVTEGIHDRFVEA 297

Query: 330 LRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR---DEKQL 384
           L    K     + ++   D+  +V+     +    ++  +    K+VYGG+R    ++  
Sbjct: 298 LVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGY 357

Query: 385 KIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMK 444
            +AP +   V +D  I +EEIFGP+  ++ V   +++  +       L+A   +   +  
Sbjct: 358 YLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHA 417

Query: 445 KEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSY-HGKFSFDAFSHKKAV 498
             F + + AG ++ N          +PFGG   S  G    G+ + + ++  K V
Sbjct: 418 THFKRRVEAGVVMVNLPTAGVDY-HVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score =  157 bits (399), Expect = 3e-42
 Identities = 113/462 (24%), Positives = 196/462 (42%), Gaps = 44/462 (9%)

Query: 61  MQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKP 120
           +   ++ +AA              T   E R+  +   A++++E +EE+   +  ++ K 
Sbjct: 35  LSALEILEAAETAY--DAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKT 92

Query: 121 PFETFISEISMTKSSCK-------------LALKEL--KYWTKPEKAKTSLTTYPSSAEI 165
                       K + K               LK L            T        A++
Sbjct: 93  -----------LKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKI----AQV 137

Query: 166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VD 224
             EPLGVVL I  +NYP  L++  +I A+  GN VV KP+         LA+   D    
Sbjct: 138 RREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFP 197

Query: 225 NSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282
              V VV G   E    L    + D I +TGS  VG  +          ++LELGGK PA
Sbjct: 198 KGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHPM--KRLVLELGGKDPA 255

Query: 283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNP 342
           +V    +L++  + I+ G  ++ +GQ C  +  ++  +  A +L++ L+ E+ +     P
Sbjct: 256 IVLPDADLELAAKEIVKGA-LSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMP 314

Query: 343 ME-SKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPDDST 399
            +   D++ +++P     +  L+D D V+    ++ GG R+   L I PT+L  V  D  
Sbjct: 315 WDNGVDITPLIDPKSADFVEGLID-DAVAKGATVLNGGGREGGNL-IYPTLLDPVTPDMR 372

Query: 400 IMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFN 459
           +  EE FGP+LPI+ V  IE++ ++       L A  F+ D    ++    +  G +  N
Sbjct: 373 LAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNIN 432

Query: 460 DTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 501
                      PF G  +SG+G+     +  + + +K ++  
Sbjct: 433 SKCQRGP-DHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVIN 473

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score =  157 bits (400), Expect = 4e-42
 Identities = 88/328 (26%), Positives = 144/328 (43%), Gaps = 14/328 (4%)

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNS 226
            PLGV  VIS WN+P  +       A+  GN VVLKP+E  P  ++ L ++LE+  +   
Sbjct: 165 RPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPG 224

Query: 227 AVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAK------HLTPVILELGG 278
            V  + G   E    L +      I +TGS  VG  +   AAK       L  VI E+GG
Sbjct: 225 VVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGG 284

Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
           K+  +VD   +L      I+   +    GQ C     +I  +    + ++ L    K   
Sbjct: 285 KNAIIVDEDADLDEAAEGIVRSAF-GFQGQKCSACSRVIVHESVYDEFLERLVERTKALK 343

Query: 339 GKNPMESK-DLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLK---IAPTILLDV 394
             +P + +  +  +++     R+   ++  K   +++ GG+  E   +   + PTI  DV
Sbjct: 344 VGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEVLELAAEGYFVQPTIFADV 403

Query: 395 PDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAG 454
           P D  + +EEIFGP+L ++  +  +++ ++       L    FS   +  +   +    G
Sbjct: 404 PPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVG 463

Query: 455 GIVFNDTIVHTTVSSLPFGGVGESGMGS 482
            +  N  I    V   PFGG   SG GS
Sbjct: 464 NLYANRKITGALVGRQPFGGFKMSGTGS 491

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score =  155 bits (393), Expect = 2e-41
 Identities = 92/359 (25%), Positives = 158/359 (44%), Gaps = 29/359 (8%)

Query: 157 TTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLA 216
            +      +  EP+GVV  I  WN P  L+   +  A+AAG  VVLKPS   P  + LLA
Sbjct: 125 GSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLA 184

Query: 217 KLLEDYVDNSAVRVVEGAV------AETSALL--EQKWDKILYTGSPRVGRIVMAAAAKH 268
           +  E         +  G V       E    L      DK+ +TGS   GR + A   + 
Sbjct: 185 EAAE------EAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGER 238

Query: 269 LTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKL 326
           L  V LELGGKS A+V  D+ ++        +    + NNGQ C+ +  I+  +    ++
Sbjct: 239 LARVTLELGGKSAAIVLDDADLD---AAVPGLVPASLMNNGQVCVALTRILVPRSRYDEV 295

Query: 327 IDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQL 384
           +++L   +      +P++ +  +  + +     R+   + + +    ++V GG R     
Sbjct: 296 VEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLD 355

Query: 385 K---IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE 441
           +   + PT+  DV +D  I +EEIFGP+L ++  +  +D+  +       L+   ++ D 
Sbjct: 356 RGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADV 415

Query: 442 QMKKEFVQNISAGGIVFNDTIVHTTVS-SLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 499
           +      + I  G +  N       +    PFGG  +SG+G   G    DA+   K++ 
Sbjct: 416 ERGLAVARRIRTGTVGVN----GFRLDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score =  154 bits (390), Expect = 3e-41
 Identities = 91/346 (26%), Positives = 154/346 (44%), Gaps = 10/346 (2%)

Query: 148 KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEI 207
           KP + + ++    +   +   P GVV VIS WNYP  L++   I A+ AGNAVVLKP   
Sbjct: 98  KPRRRRGAIPVL-TRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQ 156

Query: 208 APATSSLLAKLLEDY-VDNSAVRVVEGAVAET-SALLEQKWDKILYTGSPRVGRIVMAAA 265
              T+    +LL +  +     +VV G  +E   A+++   D +++TGS   GR+V   A
Sbjct: 157 TALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDNA-DYVMFTGSTATGRVVAERA 215

Query: 266 AKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPK 325
            + L    LELGGK+P +V    +L       +   + +N GQ C+ ++ I   +    +
Sbjct: 216 GRRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACF-SNAGQLCVSIERIYVHESVYDE 274

Query: 326 LIDSLRNELKEF-FGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQR---DE 381
            +       +    G       D+  +++     R+ + +D+       V  G R   D 
Sbjct: 275 FVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDL 334

Query: 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE 441
                 PT+L  V +D  +  EE FGP++ I  V   +++ ++       L A  ++ D 
Sbjct: 335 GPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDG 394

Query: 442 QMKKEFVQNISAGGIVFNDTIVHTTVS-SLPFGGVGESGMGSYHGK 486
              +     + AG +  N+       S   P GG+ +SG+G  HG 
Sbjct: 395 ARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGA 440

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score =  154 bits (390), Expect = 4e-41
 Identities = 105/425 (24%), Positives = 177/425 (41%), Gaps = 32/425 (7%)

Query: 91  RMSQIQSIANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTK 148
           R   ++ +A  + E  EE+  I+A+  D   P        +S       +A   L Y+  
Sbjct: 43  RARMLRELATRLREHAEELALIDAL--DCGNP--------VSAMLGDVMVAAALLDYFAG 92

Query: 149 PEKAKTSLT--TYPSSAEIIS----EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 202
                T L   T P     +     EP GVV  I  +N+P + +   +   +AAGN VV+
Sbjct: 93  ---LVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVV 149

Query: 203 KPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRI 260
           KP E AP ++  LA+L  + +      ++ G  A   A L +  D  +I   GS   GR 
Sbjct: 150 KPPEQAPLSALRLAELAREVLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRA 209

Query: 261 VMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320
           +M AAA+ +  V LELGGK+  +V    + +      +AG      GQ+C     +   +
Sbjct: 210 IMRAAAEGIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHE 269

Query: 321 DFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQ 378
               +++  +   +      +P   +  +  +V+   + R+   +D  K    ++V GG 
Sbjct: 270 SIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGG 329

Query: 379 RD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLA 433
           R      E    + PT+  DV     I +EEIFGP+L ++      +           L 
Sbjct: 330 RPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLT 389

Query: 434 AYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS 493
           A  +++D        + + AG +  N +  H      PFGGV  SG+G         +++
Sbjct: 390 AAIWTNDISQAHRTARRVEAGYVWINGSSRHFL--GAPFGGVKNSGIGREECLEELLSYT 447

Query: 494 HKKAV 498
            +K V
Sbjct: 448 QEKNV 452

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score =  154 bits (390), Expect = 4e-41
 Identities = 120/458 (26%), Positives = 200/458 (43%), Gaps = 43/458 (9%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           DV+ A  +           K    + R   +  +A+++E +  + + +I    +   F T
Sbjct: 45  DVDIAVEVAHAAFETDWGLKVSGSK-RGRCLSKLADLME-RNLDYLASIEALDNGKTFGT 102

Query: 125 FISEISMTKSSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNY 181
                   +   + +    +Y   W      +   T          EP+GV   I  WN+
Sbjct: 103 ------AKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNF 156

Query: 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSA 240
           P L+    +  A+AAGN +VLKPSE+ P ++  + KL+ E       + VV G       
Sbjct: 157 PLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGN 216

Query: 241 LL--EQKWDKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRI 297
            +      DK+ +TGS  VGR VM AAAK +L  V LELGGKSP +V    +L+      
Sbjct: 217 AISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLES----- 271

Query: 298 IAGKWMA-----NNGQACIGVDYIITTKDFAPKLIDSLRNELKEF-----FGKNPMESKD 347
            A  W A     N+GQ C     I   +    K +   + + K+      F ++  +   
Sbjct: 272 -AVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQ 330

Query: 348 LSRIVNPFHFARLASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEI 405
           +S+I     + R+ S ++  K     +  GG+R   +   I PTI  DV +D  I+KEEI
Sbjct: 331 VSQI----QYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEI 386

Query: 406 FGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFN--DTIV 463
           FGP++ ++  +  E++          LAA  F+++          + AG +  N  + + 
Sbjct: 387 FGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLH 446

Query: 464 HTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 501
           H     +PFGG  +SG+G   G+++ + ++  KAV   
Sbjct: 447 H----QVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score =  154 bits (390), Expect = 5e-41
 Identities = 125/451 (27%), Positives = 201/451 (44%), Gaps = 28/451 (6%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           DV+ A     E    +   KT   E R + +  IA+ IEE  E +  A   D  KP  ET
Sbjct: 39  DVDLAVDAAHEAFKTW--GKTSVAE-RANILNKIADRIEENLELLAVAETLDNGKPIRET 95

Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKT-SLTTYPSS--AEIISEPLGVVLVISTWNY 181
             ++I        LA+   +Y+    +A+  SL+       +    EPLGVV  I  WN+
Sbjct: 96  LAADIP-------LAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNF 148

Query: 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAET-SA 240
           P L++   +  A+AAGN VVLKP+   P +  +L +L+ D +    V VV G  +E    
Sbjct: 149 PLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDLLPKGVVNVVTGFGSEAGKP 208

Query: 241 LLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV--DSTINLQVTTRRI 297
           L       K+ +TGS  VGR++M  AA++L PV LELGGKSP +   D+         + 
Sbjct: 209 LASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKA 268

Query: 298 IAGKWMA--NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKD-LSRIVNP 354
             G+     N G+ C      +  +    + I+      +     NP++ +  +   V+ 
Sbjct: 269 EEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSK 328

Query: 355 FHFARLASLLDEDKVSD-KIVYGGQR-----DEKQLKIAPTILLDVPDDSTIMKEEIFGP 408
               ++ S +D  K    +++ GG+R      +K     PT++    +D  I +EEIFGP
Sbjct: 329 DQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGP 388

Query: 409 LLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVS 468
           +L ++T +  E++  +       L    ++ D        + I  G +  N    H   +
Sbjct: 389 VLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVN--CYHQYPA 446

Query: 469 SLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 499
             PFGG  +SG+G    K   D +   K +L
Sbjct: 447 HAPFGGYKKSGIGRETHKMMLDHYQQTKNIL 477

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score =  153 bits (388), Expect = 9e-41
 Identities = 121/447 (27%), Positives = 207/447 (46%), Gaps = 25/447 (5%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           DV++A   +K  +  + + +  +   R + +  IA++I+E +E +      D  KP  ET
Sbjct: 39  DVDRA---VKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPIRET 95

Query: 125 FISEISMTKSSCKLALKELKYWT---KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNY 181
              +I        LA    +Y+    + E+   ++    + + ++ EP+GVV  I  WN+
Sbjct: 96  RAVDIP-------LAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNF 148

Query: 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAET-SA 240
           PFL++   +  A+AAGN VV+KPS     +   LAK+++D +    V +V G  +++   
Sbjct: 149 PFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDVLPKGVVNIVTGKGSKSGEY 208

Query: 241 LLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIA 299
           LL     DK+ +TGS  VGR V  AAAK L P  LELGGKS  ++    N          
Sbjct: 209 LLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSANIIFDDANWDKALEGAQL 268

Query: 300 GKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFA 358
           G  + N GQ C     I   +    + +  L+ + +     NP++    +   VN     
Sbjct: 269 G-ILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLD 327

Query: 359 RLASLLDEDKVSD-KIVYGGQR-----DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412
           ++ S +D  K    KI+ GG R      +K   I PT++++V +D  + +EEIFGP+  +
Sbjct: 328 KILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATV 387

Query: 413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPF 472
           +  +  ++  D+       L    F+ D        + +  G +  N    +   +  PF
Sbjct: 388 IKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVN--TYNQIPAGAPF 445

Query: 473 GGVGESGMGSYHGKFSFDAFSHKKAVL 499
           GG  +SG+G    K   DA++  K + 
Sbjct: 446 GGYKKSGIGRETHKSMLDAYTQMKNIY 472

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score =  153 bits (388), Expect = 1e-40
 Identities = 120/452 (26%), Positives = 209/452 (46%), Gaps = 34/452 (7%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           DV++AA   KE    +   + K+ E R   +  IA++IE+  +EI      D  +P    
Sbjct: 39  DVDRAAKAAKEAFKRW--AELKAAE-RKRYLHKIADLIEQHADEIAVLECLDCGQP---- 91

Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEI---ISEPLGVVLVISTWNY 181
               +  T+     A +  +++    +      TYP    +   +  P+G V +I+ WN 
Sbjct: 92  ----LRQTRQQVIRAAENFRFFADKCEEAMDGRTYPVDTHLNYTVRVPVGPVGLITPWNA 147

Query: 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAET-S 239
           PF+LS   +  A+A GN VVLKP+E +P T++ LA++  E  + +    +V G   E   
Sbjct: 148 PFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGK 207

Query: 240 ALLEQKWDKIL-YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRII 298
           AL+     K + +TG    G I+M   A  L    +ELGGKSP +V    +L+   R + 
Sbjct: 208 ALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSMELGGKSPVIVFDDADLE---RALD 264

Query: 299 AGKWM--ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPF 355
           A  +M  + NG+ C     ++  +  A   ++ L   ++     +P++   ++  +++P 
Sbjct: 265 AVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPE 324

Query: 356 HFARLASLLD-EDKVSDKIVYGGQRDEKQLK--------IAPTILLDVPDDSTIMKEEIF 406
           H A++   ++  +K    I+ GG+R              + PT+     +   I +EEIF
Sbjct: 325 HLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIF 384

Query: 407 GPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTT 466
           GP+L ++  +  E++ +        LA Y +++D          + AG I  N   V   
Sbjct: 385 GPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHL 444

Query: 467 VSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            +  PFGGV  SG+G   G +SFD ++  K V
Sbjct: 445 PT--PFGGVKASGIGREGGTYSFDFYTETKNV 474

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score =  151 bits (384), Expect = 2e-40
 Identities = 117/427 (27%), Positives = 200/427 (46%), Gaps = 25/427 (5%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           D+E+A +   +       R   ++  R + +      +EE+ EE+ E I  +  KP  + 
Sbjct: 22  DIEEAIAAAVKAFRP--MRALPAHR-RAAILLHCVARLEERFEELAETIVLEAGKP-IKD 77

Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAE---IISE-PLGVVLVISTWN 180
              E++    + ++A +E    T+       L           ++   P+G V  I+ +N
Sbjct: 78  ARGEVARAIDTFRIAAEEA---TRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFN 134

Query: 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETS 239
           +P  L    V  AIAAG   VLKP+   P ++ +L ++L E  +   A  V+  +  +  
Sbjct: 135 FPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVLPCSRDDAD 194

Query: 240 ALLEQKWDKIL-YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRII 298
            L+  +  K+L +TGSP VG  + A A K    V+LELGG +  +VDS  +L    +RII
Sbjct: 195 LLVTDERIKLLSFTGSPAVGWDLKARAGKK--KVVLELGGNAAVIVDSDADLDFAAQRII 252

Query: 299 AGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHF 357
            G +    GQ+CI V  ++  +    +    L   +K     +P +   D+  +++    
Sbjct: 253 FGAF-YQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEA 311

Query: 358 ARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
            R+   ++E  V    K++ GG+RD   L   PTIL DVP D  +  EE+FGP++ +   
Sbjct: 312 ERVEGWVNE-AVDAGAKLLTGGKRDGALL--EPTILEDVPPDMEVNCEEVFGPVVTVEPY 368

Query: 416 EKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHT-TVSSLPFGG 474
           +  +++   +      L A  F+ D +        +  GG+V ND  V T  V  +P+GG
Sbjct: 369 DDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVIND--VPTFRVDHMPYGG 426

Query: 475 VGESGMG 481
           V +SG+G
Sbjct: 427 VKDSGIG 433

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score =  149 bits (377), Expect = 2e-39
 Identities = 98/325 (30%), Positives = 159/325 (48%), Gaps = 15/325 (4%)

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNS 226
           EPLGVVL I+ +N+P       +  AIAA N +VLKPSE  P ++  LA LL E  +   
Sbjct: 119 EPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPD 178

Query: 227 AVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAV 283
            + VV G   E    L      D + +TG   VG+ + A A  K     +LELGG  P +
Sbjct: 179 MLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAGYKRQ---LLELGGNDPLI 235

Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
           V    +L+      +AG + AN+GQ C  V  I+  +  A + +D L  +       +PM
Sbjct: 236 VMDDADLERAATLAVAGSY-ANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPM 294

Query: 344 -ESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPDDSTI 400
             + D+  +++    A       E+ ++   +++ G QR       APT+L  VP D+ +
Sbjct: 295 DPATDMGTVIDE-EAAIQIENRVEEAIAQGARVLLGNQRQGALY--APTVLDHVPPDAEL 351

Query: 401 MKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFND 460
           + EE FGP+ P++ V+ ++++  +  S    L++   ++D    K  V+ +  G +  N+
Sbjct: 352 VTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNE 411

Query: 461 TIVHTTVSSLPFGGVGESGMGSYHG 485
            +        PFGGV +SG+G   G
Sbjct: 412 -VPGFRSELSPFGGVKDSGLGGKEG 435

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score =  149 bits (378), Expect = 2e-39
 Identities = 130/454 (28%), Positives = 203/454 (44%), Gaps = 40/454 (8%)

Query: 66  VEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125
           VE A    K  +    +R T +   R   +++IA  I E++ E+ +    D  KP  E  
Sbjct: 51  VEAARKAFKRNKGKDWARTTGAV--RAKYLRAIAAKITERKSELAKLETLDCGKPLDE-- 106

Query: 126 ISEISMTK-SSCKLALKELKYWT-------KPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177
            +   M   + C       +Y+          +KA  SL        ++ EPLGVV +I+
Sbjct: 107 -AAWDMDDVAGC------FEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLIT 159

Query: 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVA 236
            WNYP L++   V  A+AAG   VLKPSE+A  T   LA +  +  +    + VV G   
Sbjct: 160 PWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGT 219

Query: 237 ETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTT 294
           E  A L      DKI +TGS   GR +M AAA+ + PV LELGGKSP +V   ++L    
Sbjct: 220 EAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDK-- 277

Query: 295 RRIIAGKWMA-----NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DL 348
               A +W        NGQ C     ++  +  A + ++ L    K     +P+E    L
Sbjct: 278 ----AVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRL 333

Query: 349 SRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEE 404
             +V+   + ++   +   K     I+ GG+R E   K   I PTI+ DV     I +EE
Sbjct: 334 GPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREE 393

Query: 405 IFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVH 464
           +FGP+L + T    +++ ++       LA    S+D +  +   +   AG +  N +   
Sbjct: 394 VFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCS--Q 451

Query: 465 TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
                 P+GG+  SG G   G++  + +   K V
Sbjct: 452 PCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQV 485

Length = 503

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score =  147 bits (374), Expect = 4e-39
 Identities = 112/419 (26%), Positives = 185/419 (44%), Gaps = 34/419 (8%)

Query: 91  RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
           R S ++   N++ E ++++   I  +  KP     + E           L+    W   E
Sbjct: 43  RSSLLRKWYNLMMENKDDLARLITLENGKP-----LKEAKGEILYAASFLE----WFAEE 93

Query: 151 KAKTSLTTYPSSAE-----IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 205
             +    T PS        +I +P+GV   I+ WN+P  +       A+AAG  VV+KP+
Sbjct: 94  AKRVYGDTIPSPQSDKRLIVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPA 153

Query: 206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAE-------TSALLEQKWDKILYTGSPRV 257
           E  P ++  LA+L E   +    + V+ G+ A+       TS L+     KI +TGS  V
Sbjct: 154 EQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGNVLTTSPLVR----KISFTGSTNV 209

Query: 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317
           G+I+M  +A  +  V +ELGG +P +V    +L       +A K+  N GQ C+  + + 
Sbjct: 210 GKILMKQSASTVKKVSMELGGNAPFIVFDDADLDQAVEGAMASKF-RNAGQTCVCANRLY 268

Query: 318 TTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIV 374
                  +    L   +K+    N ++       ++N     ++   +  D V    K+V
Sbjct: 269 VHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIA-DAVEKGAKVV 327

Query: 375 YGGQRDEKQLK-IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLA 433
            GG+R E       PT+L +V  D  + KEE FGPL P+   +  E+   +       LA
Sbjct: 328 TGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVGLA 387

Query: 434 AYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
           AYFFS D        + +  G +  N  ++   V   PFGGV +SG+G    K+  + +
Sbjct: 388 AYFFSRDLSRIWRVAEALEYGMVGINTGLISNVV--APFGGVKQSGLGREGSKYGIEEY 444

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score =  147 bits (372), Expect = 1e-38
 Identities = 127/444 (28%), Positives = 201/444 (45%), Gaps = 57/444 (12%)

Query: 84  KTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL 143
           +   YE R   +   A+++E+  +E+      D  KP  +   +E+ +       A +  
Sbjct: 61  RMTGYE-RSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPL-------AARLF 112

Query: 144 KY---WTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAV 200
           +Y   W       T     P     + EP+GVV  I  WN+P L+    V  A+A GN +
Sbjct: 113 RYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTI 172

Query: 201 VLKPSEIAPATSSLLAKL-LEDYVDNSAVRVVEGAVAETSALLEQKW--DKILYTGSPRV 257
           VLKP+E  P ++ L AKL  E  + +  + +V G      A +      DK+ +TGS  V
Sbjct: 173 VLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEV 232

Query: 258 GRIVMAAAAK-HLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMA---NNGQACI 311
           G+I+M  AAK +L PV LELGGKSP +V  D+ ++      + +     A   N GQ C 
Sbjct: 233 GKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVD------KAVELAHFALFFNQGQCCC 286

Query: 312 GVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIV-NPF-------------HF 357
                  ++ F  + I        EF  K   +++ L R+V +PF              F
Sbjct: 287 A-----GSRTFVHESI------YDEFVEK--AKARALKRVVGDPFRKGVEQGPQVDKEQF 333

Query: 358 ARLASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
            ++ S ++  K     ++ GG R   K   I PTI  DV DD  I ++EIFGP+  I+  
Sbjct: 334 EKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKF 393

Query: 416 EKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGV 475
           + +++      +    LAA  FS +        + + AG +  N   V    +S+PFGG 
Sbjct: 394 KTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFD--ASIPFGGY 451

Query: 476 GESGMGSYHGKFSFDAFSHKKAVL 499
             SG+G   G ++ + +   KAV+
Sbjct: 452 KMSGIGREKGIYALNNYLQVKAVV 475

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score =  146 bits (370), Expect = 7e-38
 Identities = 97/335 (28%), Positives = 156/335 (46%), Gaps = 31/335 (9%)

Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSA 227
           P GVV VIS WNYP  L++   I A+ AGNAVVLKP    P T+    +LL +  +    
Sbjct: 154 PKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDL 213

Query: 228 VRVV--EGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
            +VV   G V  T AL++   D +++TGS   GR++   A + L    LELGGK+P +V 
Sbjct: 214 WQVVTGPGPVVGT-ALVDNA-DYLMFTGSTATGRVLAEQAGRRLIGFSLELGGKNPMIVL 271

Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME- 344
              +L       +   + +N GQ CI ++ I   +    + + +    ++       M  
Sbjct: 272 DDADLDKAAAGAVRACF-SNAGQLCISIERIYVHESIYDEFVRAFVAAVRA------MRL 324

Query: 345 ------SKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQR--DEKQLKIAPTILLDV 394
                 S D+  +++      +++ +D D V+    ++ GG+   D   L   PT+L  V
Sbjct: 325 GAGYDYSADMGSLISEAQLETVSAHVD-DAVAKGATVLAGGKARPDLGPLFYEPTVLTGV 383

Query: 395 PDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKPLAAYFFSDDEQMKKEFVQNI 451
             D  + +EE FGP+   V+V  + D  + ++     P  L A  ++ D    +     I
Sbjct: 384 TPDMELAREETFGPV---VSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARI 440

Query: 452 SAGGIVFNDTIVHTTVS-SLPFGGVGESGMGSYHG 485
            AG +  N+       S   P GG+ +SG+G  HG
Sbjct: 441 RAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHG 475

Length = 524

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score =  145 bits (367), Expect = 7e-38
 Identities = 99/421 (23%), Positives = 183/421 (43%), Gaps = 21/421 (4%)

Query: 80  YNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKL- 138
           + + K    E R   +   A+++  +  E+I  +  ++ K   E  I +++      +  
Sbjct: 68  FKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVEA-IDDVAEAIDFIRYY 126

Query: 139 ALKELKYWTKPEKAKTSLTTYPSSA-EIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAG 197
           A   L+      +    +  YP    E     LG  +VIS WN+P  +    ++  +A G
Sbjct: 127 ARAALRLRYPAVE----VVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVG 182

Query: 198 NAVVLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGS 254
           N V+ KP+E A      + ++  E       V+ + G   E  A L   ++   I +TGS
Sbjct: 183 NTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGS 242

Query: 255 PRVGRIVMAAAAKHLT------PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQ 308
              G+ +  AAA+          + +E GGK+  +VD T + ++    ++   +    GQ
Sbjct: 243 LETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAF-GFQGQ 301

Query: 309 ACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDED 367
            C     +I T+     +++ L    +      P E+  DL  +++    A++ S ++  
Sbjct: 302 KCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHG 361

Query: 368 KVSDKIVYGGQRDEKQ-LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV--EKIEDSFDV 424
           K   ++V GG+R E +   +APT++ +VP  + I +EEIFGP+L ++    +   ++ +V
Sbjct: 362 KNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEV 421

Query: 425 IKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYH 484
             S P  L    +S   +  +E  +    G +  N  I    V   PFGG   SG  +  
Sbjct: 422 ANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKT 481

Query: 485 G 485
           G
Sbjct: 482 G 482

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score =  144 bits (365), Expect = 1e-37
 Identities = 105/343 (30%), Positives = 157/343 (45%), Gaps = 14/343 (4%)

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNS 226
           EP+GV   I  WN+P L++   +  A+A GN VVLKP+E  P T+  LA L+ E      
Sbjct: 144 EPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPG 203

Query: 227 AVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAV 283
            V VV G      A +      DK+ +TGS  VG+++  AA K +L  V LELGGKSP +
Sbjct: 204 VVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNI 263

Query: 284 V--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
           V  D+ ++  V            N GQ C         +    + +       K+    N
Sbjct: 264 VFADADLDYAVEQAHEAL---FFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGN 320

Query: 342 PMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDS 398
           P + K +    ++   F ++  L++  K    K+  GG+R  +K   I PT+  DV DD 
Sbjct: 321 PFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDM 380

Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVF 458
            I KEEIFGP+  I   + I++  +   +    LAA  F+ D      F   + AG +  
Sbjct: 381 RIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWV 440

Query: 459 NDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 501
           N      +  + PFGG   SG G   G++    ++  K V  +
Sbjct: 441 N-CYNVVSPQA-PFGGYKMSGNGRELGEYGLQEYTEVKTVTIK 481

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  143 bits (362), Expect = 3e-37
 Identities = 97/324 (29%), Positives = 147/324 (45%), Gaps = 15/324 (4%)

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSA 227
           +P+GVV  I+ WNYP +++   +  A+AAGN VVLKPSEI P T+  LA+L  D +    
Sbjct: 137 DPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADILPPGV 196

Query: 228 VRVVEGAVAET-SALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
           + VV G  A    AL+   K   +  TGS   G+ V++AAA  +    LELGGK+P +V 
Sbjct: 197 LNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSVKRTHLELGGKAPVIVF 256

Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF-FGKNPME 344
              +L      I    +  N GQ C     I   +     L+  L   +     G    E
Sbjct: 257 DDADLDAVVEGIRTFGYY-NAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDE 315

Query: 345 SKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQR-DEKQLKIAPTILLDVPDDSTIM 401
             +L  +++  H  R+A  ++  K     ++V GG+  D K     PT+L     D  I+
Sbjct: 316 DTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIV 375

Query: 402 KEEIFGPLLPIVTVEKIEDSFDVIK---SKPKPLAAYFFSDDEQMKKEFVQNISAGGIVF 458
           + E+FG   P+V+V   +D    ++        LA+  ++ D          +  G    
Sbjct: 376 QREVFG---PVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWV 432

Query: 459 NDTIVHTTVSSLPFGGVGESGMGS 482
           N       VS +P GG  +SG G 
Sbjct: 433 NTHF--MLVSEMPHGGQKQSGYGK 454

Length = 475

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score =  142 bits (361), Expect = 5e-37
 Identities = 88/355 (24%), Positives = 157/355 (44%), Gaps = 39/355 (10%)

Query: 169 PLGVVLVISTWNYPFLLSLDPVIG-----AIAAGNAVVLKPSEIAPATSSLLAKLLEDYV 223
           PLGVV VI+ +N+P       V G     A+  GN VV KPSE  P T+  + K+L + +
Sbjct: 133 PLGVVGVITAFNFPV-----AVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVL 187

Query: 224 D-----NSAVRVVEGAVAETSALLE--QKWDKILYTGSPRVGRIVMAAAAKHLTPVILEL 276
           +        V +V G   +   LL    +   + +TGS  VGR V    A+    V+LEL
Sbjct: 188 EKNGLPPGVVNLVTGG-GDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLEL 246

Query: 277 GGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE 336
           GG +  +V    +L +  R ++    +   GQ C     +I  +    + ++ L    K+
Sbjct: 247 GGNNAIIVMDDADLDLAVRAVLFAA-VGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQ 305

Query: 337 FFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGG---QRDEKQLKIAPTIL 391
               +P++    +  ++N     +  + ++  K     ++ GG      E    + PTI+
Sbjct: 306 VRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIV 365

Query: 392 LDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFV--- 448
             V DD+ I++EE F P+L ++  + +E++  +    P+ L++  F++D  +++ F    
Sbjct: 366 TGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTED--LREAFRWLG 423

Query: 449 QNISAGGIVF--NDTI---VHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
              S  GIV     T    +        FGG  E+G G   G  ++  +  +   
Sbjct: 424 PKGSDCGIVNVNIPTSGAEIG-----GAFGGEKETGGGRESGSDAWKQYMRRSTC 473

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score =  142 bits (361), Expect = 7e-37
 Identities = 98/329 (29%), Positives = 157/329 (47%), Gaps = 19/329 (5%)

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNS 226
            PLGV +VIS WN+PF +     + AI AGN V+LKP+   P  ++   ++LE+  +   
Sbjct: 170 IPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAG 229

Query: 227 AVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAK------HLTPVILELGG 278
            V  V G+ +E    L    K   I +TGS  VG  +   AAK       L  VI E+GG
Sbjct: 230 VVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGG 289

Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
           K   VVD   +L +    I+A  +   +GQ C      I  +D   ++++ +    KE  
Sbjct: 290 KDAIVVDEDADLDLAAESIVASAF-GFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELT 348

Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTILLDVPDD 397
             NP ++  +  ++N   F ++ S ++  K   ++V GG+ D+ +   I PTI  DV   
Sbjct: 349 VGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPK 408

Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD----EQMKKEFVQNISA 453
           + IM+EEIFGP++  +  +  + + ++  +    L     S++    E+ ++EF      
Sbjct: 409 ARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREF----HV 464

Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGS 482
           G + FN       V   PFGG   SG  S
Sbjct: 465 GNLYFNRGCTGAIVGYHPFGGFNMSGTDS 493

Length = 514

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score =  139 bits (352), Expect = 2e-36
 Identities = 80/262 (30%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSA 227
            LGV   I  WN+PF L    +  A+  GN +V+KPSE  P  +   AK++++  +    
Sbjct: 71  ALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGV 130

Query: 228 VRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
             +V G        L    K   +  TGS   G  +MAAAAK++T V LELGGK+PA+V 
Sbjct: 131 FNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVM 190

Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMES 345
              +L +  + I+  + + N+GQ C   + +   K    + ++ L   ++     NP E 
Sbjct: 191 DDADLDLAVKAIVDSR-VINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAER 249

Query: 346 KDLSR--IVNPFHFARLASLLDEDKVSD-KIVYGGQRDE-KQLKIAPTILLDVPDDSTIM 401
            D++   ++N     R+   +        ++  GG+  E K     PT+LLDV  + +IM
Sbjct: 250 NDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIM 309

Query: 402 KEEIFGPLLPIVTVEKIEDSFD 423
            EE FGP+LP+V  + +E++  
Sbjct: 310 HEETFGPVLPVVAFDTLEEAIA 331

Length = 409

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score =  140 bits (354), Expect = 4e-36
 Identities = 126/454 (27%), Positives = 203/454 (44%), Gaps = 37/454 (8%)

Query: 45  SFSCRCSAT--MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMI 102
           SF     AT  + A   Q +  DV+ A   +   R  + S        R   +  IA  I
Sbjct: 38  SFPTINPATGEVLASVLQAEEEDVDAA---VAAARTAFESWSALPGHVRARHLYRIARHI 94

Query: 103 EEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKAKTSLT 157
           ++ +     +E++  D  KP  E+   +I        L  +   +   W   +   T L 
Sbjct: 95  QKHQRLFAVLESL--DNGKPIRESRDCDI-------PLVARHFYHHAGWA--QLLDTELA 143

Query: 158 TYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAK 217
            +        +P+GVV  I  WN+P L+    +  A+A GN VVLKP+E  P T+ L A+
Sbjct: 144 GW--------KPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAE 195

Query: 218 LLEDY-VDNSAVRVVEGAVAETSALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILE 275
           +  +  +    + +V G  +  SAL      DK+ +TGS  VGR +  A A     + LE
Sbjct: 196 ICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLE 255

Query: 276 LGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335
           LGGKSP +V    +L      I+   W  N GQ C     ++  +  A +LI  L+  + 
Sbjct: 256 LGGKSPFIVFDDADLDSAVEGIVDAIWF-NQGQVCCAGSRLLVQESVAEELIRKLKERMS 314

Query: 336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVY--GGQRDEKQLKIAPTILL 392
                +P++ + D+  IV+P    R+  L++E +     V+  G     K     PT+  
Sbjct: 315 HLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFT 374

Query: 393 DVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNIS 452
           +VP  S I +EEIFGP+L ++T    +++  +  + P  LAA  +S++  +  E   ++ 
Sbjct: 375 NVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLK 434

Query: 453 AGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGK 486
           AG +  N   +    +   FGG  ESG G   GK
Sbjct: 435 AGVVWINGHNLFDAAA--GFGGYRESGFGREGGK 466

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score =  138 bits (350), Expect = 2e-35
 Identities = 94/339 (27%), Positives = 154/339 (45%), Gaps = 28/339 (8%)

Query: 166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VD 224
           +  P GV +VIS WN+PF + +   +  I  GN VVLKP+E AP  ++   ++LE+  + 
Sbjct: 164 VYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLP 223

Query: 225 NSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAK------HLTPVILEL 276
              V+ V G+ +E    L    K   I +TGS  VG  +   AAK      HL  VI E+
Sbjct: 224 KGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQKHLKRVIAEM 283

Query: 277 GGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN---E 333
           GGK   +VD   ++++  +      +    GQ C      +  +    K+ D +     E
Sbjct: 284 GGKDTVIVDEDADIELAAQSAFTSAF-GFAGQKCSAGSRAVVHE----KVYDEVVERFVE 338

Query: 334 LKEFFGKNPMESKD--LSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTI 390
           + E     P +S D  +  +++   F ++   ++  K   ++V GG  D+ +   I PTI
Sbjct: 339 ITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEGRLVSGGCGDDSKGYFIGPTI 398

Query: 391 LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD----EQMKKE 446
             DV   + + +EEIFGP++  +     +++ ++  +    L     S++     + K E
Sbjct: 399 FADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAE 458

Query: 447 FVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG 485
           F      G + FN  I    V   PFGG   SG  S  G
Sbjct: 459 F----EVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAG 493

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score =  133 bits (337), Expect = 7e-34
 Identities = 106/432 (24%), Positives = 187/432 (43%), Gaps = 46/432 (10%)

Query: 91  RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
           R   +  +A+  E   E +   +  +  K   E    EIS   S       EL+Y+    
Sbjct: 44  RARVLLELADAFEANAERLARLLALENGKILGEARF-EISGAIS-------ELRYY---- 91

Query: 151 KAKTSLTTYPSSAE--------IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 202
            A  + T      E        ++ EP+GV  +I  WN P +L +  +  A+AAG  VV+
Sbjct: 92  -AGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVV 150

Query: 203 KPSEIAPATSSLLAKLLE--DYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVG 258
           KP+      ++ + ++L     +    V +   + +E +A L      D I +TGS   G
Sbjct: 151 KPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATG 210

Query: 259 RIVMAAAAKHLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYI 316
           R +MAAAA  L  + LELGGK+P +V  D+ ++  +     +        GQ C+    +
Sbjct: 211 RAIMAAAAPTLKRLGLELGGKTPCIVFDDADLDAALP---KLERALTIFAGQFCMAGSRV 267

Query: 317 ITTKDFAPKLIDSLRNELKEF-FGKNPMESKDLSRIVNPFHFARLASLLDE--DKVSDKI 373
           +  +  A ++ D L   L     G     + D+  +++  +  R+  +++      ++ +
Sbjct: 268 LVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVV 327

Query: 374 VYGGQRDEKQLK---IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPK 430
           + GG   E   K   + PT+L     D+ I++EEIFG   P++T+E  +D  + +     
Sbjct: 328 LRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFG---PVLTLETFDDEAEAVALAND 384

Query: 431 P---LAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTV-SSLPFGGVGESGMGSYHGK 486
               LAA  ++ D        + I AG +  ND      + +    GG  +SG+G  HG 
Sbjct: 385 TDYGLAASVWTRDLARAMRVARAIRAGTVWIND---WNKLFAEAEEGGYRQSGLGRLHGV 441

Query: 487 FSFDAFSHKKAV 498
            + + F   K +
Sbjct: 442 AALEDFIEYKHI 453

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score =  133 bits (337), Expect = 7e-34
 Identities = 97/351 (27%), Positives = 156/351 (44%), Gaps = 27/351 (7%)

Query: 166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VD 224
           + +PLGVV VIS WN P LL    V  A+A GN VV+KPSE  P T++LL +++    V 
Sbjct: 136 VRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVP 195

Query: 225 NSAVRVVEG-AVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
                VV G         L +    D I +TG  R G  +M AAA  + PV  ELGGK+ 
Sbjct: 196 KGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFELGGKNA 255

Query: 282 AVVDSTINLQVTTRRIIAG---KWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
           A+V +  +        +AG       N GQ C+G + +   +    + + +L+   +   
Sbjct: 256 AIVFADCDFDAA----VAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLK 311

Query: 339 GKNPME-SKDLSRIVNPFHFARLASLLD---EDKVSDKIVYGG-------QRDEKQLKIA 387
              P + + ++  +++  H  ++ S      E+  +  +V GG               + 
Sbjct: 312 IGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGAT--VVTGGGVPDFGDALAGGAW-VQ 368

Query: 388 PTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEF 447
           PTI   +PD + ++ EEIFGP   I   +  E+   +    P  LAA  +++D       
Sbjct: 369 PTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRV 428

Query: 448 VQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            + +  G +  N   +    +  PFGG   SG+G   G  S + ++    V
Sbjct: 429 ARQMEVGIVWVNSWFLRDLRT--PFGGSKLSGIGREGGVHSLEFYTELTNV 477

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score =  133 bits (337), Expect = 9e-34
 Identities = 105/353 (29%), Positives = 160/353 (45%), Gaps = 25/353 (7%)

Query: 163 AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE-- 220
                +PLGVV  I+ +N+P ++ L     AIA GN  VLKPSE  P  +  LA+LL+  
Sbjct: 130 TYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEA 189

Query: 221 ---DYVDNSAVRVVEGAVAETSALLEQKWDK-ILYTGSPRVGRIVMAAAAKHLTPVILEL 276
              D V N    VV G     +ALL+    K + + GS  VG  +   AA +   V    
Sbjct: 190 GLPDGVLN----VVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALG 245

Query: 277 GGKSPAVVDSTINLQVTTRRIIAGKW-MANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335
           G K+ AVV    +L+ T   ++   +  A  GQ C+ +   +   D A + I  L    K
Sbjct: 246 GAKNHAVVMPDADLEQTANALVGAAFGAA--GQRCMALSVAVAVGDEADEWIPKLVERAK 303

Query: 336 EF-FGKNPMESKDLSRIVNPFHFARLASLLDE-DKVSDKIVYGGQRDEKQLK------IA 387
           +   G       D+  +++P    R+  L++   +   K+V  G R  K         + 
Sbjct: 304 KLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDG-RGVKVPGYENGNFVG 362

Query: 388 PTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEF 447
           PTIL +V  D  I KEEIFGP+L IV V+ ++++  +I + P    A  F+      ++F
Sbjct: 363 PTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKF 422

Query: 448 VQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYH--GKFSFDAFSHKKAV 498
            + + AG +  N  I    ++   FGG   S  G  H  GK     ++  K V
Sbjct: 423 QREVDAGMVGINVPIP-VPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTV 474

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score =  132 bits (333), Expect = 1e-33
 Identities = 102/419 (24%), Positives = 176/419 (42%), Gaps = 53/419 (12%)

Query: 87  SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYW 146
           S E R + ++  A +++  +EE+   I ++  KP +E   +E++       +++K     
Sbjct: 20  SLEERAAILRRFAELLKANKEELARLISRETGKPLWEA-QTEVAAMAGKIDISIKAYHER 78

Query: 147 TKPEKAKT----SLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 202
           T           ++  +         P GV+ V   +N+P  L    ++ A+ AGN VV 
Sbjct: 79  TGERATPMAQGRAVLRH--------RPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVF 130

Query: 203 KPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQKW-DKILYTGSPRVGRI 260
           KPSE+ PA + L+ +L E+  +    + +V+G      AL   +  D +L+TGS   G +
Sbjct: 131 KPSELTPAVAELMVELWEEAGLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLL 190

Query: 261 VMAAAAKHLTPVI--LELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIIT 318
           +    A      I  LE+GG +P VV    ++      I+   ++   GQ C     +I 
Sbjct: 191 LHRQFAGR-PGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLT-AGQRCTCARRLIV 248

Query: 319 TKD-FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPF-HFARLASLLDEDKVSDKI--- 373
                    ++ L    K              RI  P      +  L+     +  +   
Sbjct: 249 PDGAVGDAFLERLVEAAKRL------------RIGAPDAEPPFMGPLIIAAAAARYLLAQ 296

Query: 374 ----VYGGQ-------RDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSF 422
                 GG+              ++P I +DV D + +  EEIFGPLL +   +  +++ 
Sbjct: 297 QDLLALGGEPLLAMERLVAGTAFLSPGI-IDVTDAADVPDEEIFGPLLQVYRYDDFDEAI 355

Query: 423 DVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTT--VSSLPFGGVGESG 479
            +  +    L+A   SDDE + + F+  I AG + +N     TT   S+ PFGGVG SG
Sbjct: 356 ALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRP---TTGASSTAPFGGVGLSG 411

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score =  133 bits (336), Expect = 1e-33
 Identities = 118/372 (31%), Positives = 171/372 (45%), Gaps = 74/372 (19%)

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL-----LEDY 222
           EPLGV   I  WNYP  ++      A+AAGNA++ KPSE+ P T+  LA++     L D 
Sbjct: 141 EPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDG 200

Query: 223 VDNSAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKS 280
           V N    VV+G      A L +  D  K+ +TG    G+ VMAAAA  L  V +ELGGKS
Sbjct: 201 VFN----VVQGD-GRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGKS 255

Query: 281 PAVV--DSTINLQVTTRRIIAGKWMAN---NGQACIGVDYIIT--TKDFAPKLIDSLRNE 333
           P +V  D+ ++      R      +AN   +GQ C       T  T+ F  K        
Sbjct: 256 PLIVFDDADLD------RAADIAMLANFYSSGQVC-------TNGTRVFVQK-------S 295

Query: 334 LKEFFGKNPMESKDLSRIVNPFH----FARLASLLDEDKVSDKI----------VYGGQR 379
           +K  F    +E  +  RI +P      F  L S    DKV   I          + GG+R
Sbjct: 296 IKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGER 355

Query: 380 -DEKQLK----IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKP 431
             E        +APT+  D  DD TI++EEIFGP++ ++T +  ED  +VI         
Sbjct: 356 LTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDD-ED--EVIARANDTEYG 412

Query: 432 LAAYFFSDDEQMKKEFVQNISAGGIV----FNDTIVHTTVSSLPFGGVGESGMGSYHGKF 487
           LAA  F+ D       +  + A GI     + ++        +P GG  +SG+G  +G  
Sbjct: 413 LAAGVFTADLSRAHRVIHQLEA-GICWINTWGESPA-----EMPVGGYKQSGIGRENGIA 466

Query: 488 SFDAFSHKKAVL 499
           + + ++  K+V 
Sbjct: 467 TLEHYTQIKSVQ 478

Length = 488

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score =  128 bits (323), Expect = 6e-32
 Identities = 96/353 (27%), Positives = 163/353 (46%), Gaps = 22/353 (6%)

Query: 160 PSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL 219
           P+   +  E +GVV  I+ WN+P  ++L  +  A+AAGN VVLKP+   P  +++L +L+
Sbjct: 132 PTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAPDTPWCAAVLGELI 191

Query: 220 EDYVDNSA--VRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILE 275
            ++ D     V +V  +     ALL +  + D + +TGS   GR VMA AA  L  V LE
Sbjct: 192 AEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAATLKKVFLE 251

Query: 276 LGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAP--KLIDSLRNE 333
           LGGKS  +V    +L      + A     + GQ C      ITT+   P  +  +++   
Sbjct: 252 LGGKSAFIVLDDADLAAAC-SMAAFTVCMHAGQGC-----AITTRLVVPRARYDEAVAAA 305

Query: 334 LKEFFGKNPMESKDLSRIVNPFHFA----RLASLLD-EDKVSDKIVYGGQRDEKQLK--- 385
                   P +  D   +  P   A    R+ S LD       +   GG R   + +   
Sbjct: 306 AATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPADRDRGFF 365

Query: 386 IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKK 445
           + PT++  + +++ + +EEIFGP+L ++  +  +D+  +    P  L+   F  D +   
Sbjct: 366 VEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPERAA 425

Query: 446 EFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
                +  G +  N  + ++  +  PFGG  +SG+G   G   F+ +   K +
Sbjct: 426 AVAARVRTGTVNVNGGVWYS--ADAPFGGYKQSGIGREMGVAGFEEYLETKLI 476

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score =  126 bits (319), Expect = 2e-31
 Identities = 97/341 (28%), Positives = 162/341 (47%), Gaps = 14/341 (4%)

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNS 226
           EP+GVV  I  WN+P  +    V  A+AAG  +V+KP+E  P ++   A L +   V + 
Sbjct: 157 EPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDG 216

Query: 227 AVRVVEGAVAETSALLEQKW--DKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAV 283
            + VV G      A +      DK+ +TGS  VGR +M AAA  +L  V LELGGKSP +
Sbjct: 217 VINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLL 276

Query: 284 V--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
           +  D+ +++ V    +       N G+ C+    +   +    + +  L  + K++   +
Sbjct: 277 IFDDADVDMAVDLALLGI---FYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGD 333

Query: 342 PMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDS 398
           P + +      V+   F ++ S ++  K     ++ GG+   +K   I PTI  DV +D 
Sbjct: 334 PFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDM 393

Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVF 458
            I ++EIFGP++ ++  + +E++     +    LAA   + D  +     ++I AG I  
Sbjct: 394 KIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWV 453

Query: 459 NDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 499
           N           PFGG   SG G   G  + D +   K+V+
Sbjct: 454 NCYFAFD--PDCPFGGYKMSGFGRDQGMDALDKYLQVKSVV 492

Length = 501

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score =  125 bits (316), Expect = 5e-31
 Identities = 97/343 (28%), Positives = 166/343 (48%), Gaps = 18/343 (5%)

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL-LEDYVDNS 226
           EP+GV  ++  WNYP ++    +   +AAGN VVLKP+++ P T+   A+L ++      
Sbjct: 146 EPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKG 205

Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAV 283
            + ++ G+ +     L    D  K+ +TGS  +G+ +M + A  +L  V LELGGKSP +
Sbjct: 206 VINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLI 265

Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
           + +  ++    R  ++  +  N G+ CI    +   +    + +  +  E+K+    +P+
Sbjct: 266 IFADCDMDKAVRMGMSSVFF-NKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPL 324

Query: 344 ESKDLSRIVNPFHFARLASLLD--EDKVSD--KIVYGGQR-DEKQLKIAPTILLDVPDDS 398
           +        N  H A L  L++  E  V +   +VYGG++ D       PT+  DV D  
Sbjct: 325 DRSTDHGPQN--HKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHM 382

Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKP---LAAYFFSDDEQMKKEFVQNISAGG 455
            I KEE FGP++ I++     D   V++        LA+  F+ D          + A G
Sbjct: 383 FIAKEESFGPIM-IISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEA-G 440

Query: 456 IVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            VF +T   T V++ PFGG  +SG G   G+ + + +   K V
Sbjct: 441 TVFVNTYNKTDVAA-PFGGFKQSGFGKDLGEEALNEYLKTKTV 482

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score =  125 bits (315), Expect = 6e-31
 Identities = 118/455 (25%), Positives = 201/455 (44%), Gaps = 37/455 (8%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           D+E A       +  +   KT   E R + +  IA+ +E   E +  A   D  KP  ET
Sbjct: 39  DIELALDAAHAAKEAWG--KTSVAE-RANILNKIADRMEANLEMLAVAETWDNGKPVRET 95

Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKT-SLTTYPSS--AEIISEPLGVVLVISTWNY 181
             ++I        LA+   +Y+    +A+  S++    +  A    EPLGVV  I  WN+
Sbjct: 96  LAADIP-------LAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNF 148

Query: 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSAL 241
           P L++   +  A+AAGN VVLKP+E  PA+  +L +L+ D +    V VV G   E    
Sbjct: 149 PLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDLLPPGVVNVVNGFGLEAGKP 208

Query: 242 L--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV--------DSTINLQ 291
           L   ++  K+ +TG    GR++M  A++++ PV LELGGKSP +         D+  +  
Sbjct: 209 LASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPNIFFADVMDADDAFFDKA 268

Query: 292 VTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKD-LSR 350
           +    + A     N G+ C      +  +    + ++     +K     NP++++  +  
Sbjct: 269 LEGFVMFA----LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTETMIGA 324

Query: 351 IVNPFHFARLASLLDEDKVSD-KIVYGGQR-----DEKQLKIAPTILLDVPDDSTIMKEE 404
             +     ++ S +D  K    +++ GG+R             PT      +   I +EE
Sbjct: 325 QASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKG-GNKMRIFQEE 383

Query: 405 IFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVH 464
           IFGP+L + T +  E++ ++       L A  ++ D        + I AG +  N    H
Sbjct: 384 IFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTN--CYH 441

Query: 465 TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 499
              +   FGG  +SG+G  + K   D +   K +L
Sbjct: 442 LYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLL 476

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  125 bits (314), Expect = 1e-30
 Identities = 95/342 (27%), Positives = 168/342 (49%), Gaps = 9/342 (2%)

Query: 163 AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-ED 221
           A I+ EP+GV+  I  WN+P LL+   +  A+AAGN+V+LKPSE +P ++  LA L  E 
Sbjct: 151 AMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEA 210

Query: 222 YVDNSAVRVVEGAVAET-SAL-LEQKWDKILYTGSPRVGRIVMA-AAAKHLTPVILELGG 278
            + +  + VV G   E   AL      D I +TGS R G+ ++  A   ++  V LE GG
Sbjct: 211 GLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGG 270

Query: 279 KSPAVVDSTI-NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
           KS  +V +   +LQ       AG +  N GQ CI    ++  +  A + +  L+ + + +
Sbjct: 271 KSANIVFADCPDLQQAASATAAGIFY-NQGQVCIAGTRLLLEESIADEFLALLKQQAQNW 329

Query: 338 FGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPD 396
              +P++ +  +  +++  H   + S + E +   +++  G+       I PTI +DV  
Sbjct: 330 QPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDP 389

Query: 397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGI 456
           ++++ +EEIFGP+L +      E +  +       L A  ++ D        + + AG +
Sbjct: 390 NASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSV 449

Query: 457 VFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
             N+   +    ++PFGG  +SG G      + + F+  K +
Sbjct: 450 FVNN--YNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTI 489

Length = 494

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score =  124 bits (314), Expect = 1e-30
 Identities = 125/444 (28%), Positives = 197/444 (44%), Gaps = 57/444 (12%)

Query: 84  KTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL 143
           K  +YE R   +   A+++E+  +E+      D  KP  ++  +E+ M         +  
Sbjct: 115 KMTAYE-RSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMF-------ARLF 166

Query: 144 KY---WTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAV 200
           +Y   W       T     P   + + EP+GV   I  WN+P L+    V  A+A GN +
Sbjct: 167 RYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 226

Query: 201 VLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALLEQKW--DKILYTGSPRV 257
           VLK +E  P ++   AKLL E  +    + VV G      A L      DK+ +TGS   
Sbjct: 227 VLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDT 286

Query: 258 GRIVMAAAAK-HLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVD 314
           G+IV+  AAK +L PV LELGGKSP +V  D+ ++  V    +       N GQ C    
Sbjct: 287 GKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAV---ELAHFALFFNQGQCCCA-- 341

Query: 315 YIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIV-NPF-------------HFARL 360
               ++ F  + +        EF  K   +++ L R+V +PF              F ++
Sbjct: 342 ---GSRTFVHERV------YDEFVEKA--KARALKRVVGDPFKKGVEQGPQIDSEQFEKI 390

Query: 361 ASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKI 418
              +     S   +  GG R   K   I PT+  +V DD  I ++EIFGP+  I+   K 
Sbjct: 391 LRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSIL---KF 447

Query: 419 EDSFDVIK---SKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGV 475
           +D  +VI+   +    LAA  F+ +        + +  G +  N   V    +++PFGG 
Sbjct: 448 KDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFD--AAIPFGGY 505

Query: 476 GESGMGSYHGKFSFDAFSHKKAVL 499
             SG+G   G +S + +   KAV+
Sbjct: 506 KMSGIGREKGIYSLNNYLQVKAVV 529

Length = 538

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score =  122 bits (307), Expect = 8e-30
 Identities = 99/347 (28%), Positives = 160/347 (46%), Gaps = 35/347 (10%)

Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
           +I +P+GV   I+ WN+P  +       A+AAG  +VLKP+   P ++  LA+L     +
Sbjct: 142 VIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGI 201

Query: 224 DNSAVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
                 VV G+       L       K+ +TGS  +GR +M   AK +  V LELGG +P
Sbjct: 202 PAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 261

Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD----FAPKLIDSLR-----N 332
            +V    +L       +A K+  N GQ C+  + +         FA KL  ++      +
Sbjct: 262 FIVFDDADLDKAVEGALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGD 320

Query: 333 ELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKI-AP 388
            L++     P+ + K ++++    H A        D +    ++V GG+  E       P
Sbjct: 321 GLEKGVTIGPLIDEKAVAKVEE--HIA--------DALEKGARVVCGGKAHELGGNFFQP 370

Query: 389 TILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKP---LAAYFFSDDEQMKK 445
           TIL+DVP ++ + KEE FGPL P+    + +D  DVI         LAAYF++ D     
Sbjct: 371 TILVDVPANAKVAKEETFGPLAPLF---RFKDEADVIAQANDTEFGLAAYFYARDLSRVF 427

Query: 446 EFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
              + +  G +  N  I+   V+  PFGG+  SG+G    K+  + +
Sbjct: 428 RVGEALEYGIVGINTGIISNEVA--PFGGIKASGLGREGSKYGIEDY 472

Length = 482

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  118 bits (297), Expect = 1e-28
 Identities = 109/402 (27%), Positives = 195/402 (48%), Gaps = 22/402 (5%)

Query: 91  RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
           R++ ++ +A+++EE+ +E+   I ++  KP  +  + E++      +LA  EL      E
Sbjct: 46  RIAILERLADLMEERADELALLIAREGGKPLVDAKV-EVTRAIDGVELAADELGQLGGRE 104

Query: 151 KAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE 206
                LT  P+SA  I+    EP+GVV+ IS +N+P  L +  V  AIAAG  V++KP+ 
Sbjct: 105 IP-MGLT--PASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPAL 161

Query: 207 IAPATSSLLAKLL-EDYVDNSAVRVV--EGAVAETSALLEQKWDKILYTGSPRVGRIVMA 263
             P +      LL E  +     + V  E AVAE     + +     + GS RVG ++ +
Sbjct: 162 ATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVT-DPRVAFFSFIGSARVGWMLRS 220

Query: 264 AAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFA 323
             A   T   LE GG +P +VD + +L      ++ G +  + GQ C+ V  +    + A
Sbjct: 221 KLAPG-TRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFY-HAGQVCVSVQRVFVPAEIA 278

Query: 324 PKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE 381
                 L    ++    +P +   ++  ++ P    R+   ++E   +  +++ GG+R  
Sbjct: 279 DDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLS 338

Query: 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE 441
                APT+LLD P D+ +  +EIFGP++ + + + ++++     S P    A  F+ D 
Sbjct: 339 DTT-YAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDL 397

Query: 442 QMKKEFVQNISAGGIVFNDTIVHTT--VSSLPFGGVGESGMG 481
            +  + V+ + A  ++ ND   HT   V  +PF G  +SG G
Sbjct: 398 DVALKAVRRLDATAVMVND---HTAFRVDWMPFAGRRQSGYG 436

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score =  118 bits (296), Expect = 2e-28
 Identities = 93/325 (28%), Positives = 147/325 (45%), Gaps = 13/325 (4%)

Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVD 224
           I  +PLGVV  I+ WNYP +++   +  A+AAGN VVLKPSEI P T+  LA+L +D   
Sbjct: 133 IRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFP 192

Query: 225 NSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282
              V ++ G        L   +K   +  TGS   G  +++  A  +    +ELGGK+P 
Sbjct: 193 AGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPV 252

Query: 283 VV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
           +V  D+ I+  V   R        N GQ C     I   +     L++ L   +      
Sbjct: 253 IVFDDADIDAVVEGVRTFG---FYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSG 309

Query: 341 NPM-ESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDE-KQLKIAPTILLDVPD 396
            P  ES +L  + +  H  R+   ++E K     K++ GG++ +      APT+L     
Sbjct: 310 APDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQ 369

Query: 397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGI 456
           D  I+++E+FGP++ I + +  E   +        LA+  ++ D          +  G  
Sbjct: 370 DDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCT 429

Query: 457 VFNDTIVHTTVSSLPFGGVGESGMG 481
             N   +   VS +P GG   SG G
Sbjct: 430 WVNTHFM--LVSEMPHGGQKLSGYG 452

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score =  116 bits (291), Expect = 8e-28
 Identities = 88/343 (25%), Positives = 162/343 (47%), Gaps = 24/343 (6%)

Query: 156 LTTYPSSAEIIS--EPL-GVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
           LT +  + ++ +  EPL GV+  I+ +N+P       +  AIA  N +V+KPSE  P ++
Sbjct: 123 LTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSA 182

Query: 213 SLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHL 269
             LA +L E  +    ++VV G   E +  L      D + +TG   +G+ +  AA    
Sbjct: 183 LYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI--AARAGY 240

Query: 270 TPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDS 329
              +LELGG  P +V    +L       + G +  N+GQ C  V  ++  +  A +  + 
Sbjct: 241 RRQVLELGGNDPLIVMEDADLDRAADLAVKGSY-KNSGQRCTAVKRMLVQESVADRFTEL 299

Query: 330 LRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSD------KIVYGGQRDEK 382
           L  + + +   +PM  S D+  +++       A++L E +V++      +++ G  RD  
Sbjct: 300 LVEKTRAWRYGDPMDPSVDMGTVID-----EAAAILFEARVNEAIAQGARLLLGNVRDGA 354

Query: 383 QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQ 442
               APT+L  V    T+++EE FGP+ P++    I+D+  +  S    L++   ++   
Sbjct: 355 LY--APTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLD 412

Query: 443 MKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG 485
               F+  +  G +   + +    +   PFGG+ +SG+G   G
Sbjct: 413 YITRFIAELQVGTVNVWE-VPGYRLELTPFGGIKDSGLGYKEG 454

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score =  114 bits (287), Expect = 3e-27
 Identities = 113/435 (25%), Positives = 188/435 (43%), Gaps = 55/435 (12%)

Query: 84  KTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL 143
           +T ++  R     + A+++E + +++   +  ++ K         ++  K+      K  
Sbjct: 40  RTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKT--------LASAKAEALKCAKGF 91

Query: 144 KYWTKPEKAKTSLTTYPSSAEIIS--------EPLGVVLVISTWNYPFLLSLDPVIGAIA 195
           +Y+   E A+  L   P+ A  +         +PLGVVL +  WN+P    +     A+ 
Sbjct: 92  RYYA--EHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALM 149

Query: 196 AGNAVVLKPSEIAPATSSLLAKLLE--DYVDNSAVRVVEGAVAETSALLEQKWDKILYTG 253
           AGN  +LK +   P T+  LA L     + D     ++ G+ A  + L + +      TG
Sbjct: 150 AGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTG 209

Query: 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVV------DSTINLQVTTRRIIAGKWMANNG 307
           S   GR V A A   +   +LELGG  P +V      D      VT R       + NNG
Sbjct: 210 SEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMPSADLDRAAETAVTAR-------VQNNG 262

Query: 308 QACIGVDYIITTKD----FAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLAS 362
           Q+CI     I   D    FA K +  +   L+   G +P     D+  +        +  
Sbjct: 263 QSCIAAKRFIVHADVYDAFAEKFVARMA-ALR--VG-DPTDPDTDVGPLATEQGRDEVEK 318

Query: 363 LLDEDKVSD--KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIE 419
            +D D V+    I+ GG+R D       PT++ D+  D  +  EE+FGP+  +  V  I+
Sbjct: 319 QVD-DAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADID 377

Query: 420 DSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVS--SLPFGGVGE 477
           ++ ++  +    L +  ++ DE  ++ F+ ++ AG +  N      TVS   LPFGGV  
Sbjct: 378 EAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFING----MTVSYPELPFGGVKR 433

Query: 478 SGMG---SYHGKFSF 489
           SG G   S HG   F
Sbjct: 434 SGYGRELSAHGIREF 448

Length = 457

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score =  110 bits (275), Expect = 1e-25
 Identities = 91/409 (22%), Positives = 174/409 (42%), Gaps = 33/409 (8%)

Query: 91  RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
           R +++  +A+++E    E++    ++  K      I+E+       + A+   +Y+    
Sbjct: 98  RAAKLDRLADLLELHMPELMALCVREAGKT-IHNAIAEV-------REAVDFCRYY---- 145

Query: 151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPA 210
            AK          E   E  GV + IS WN+P  +    +  A+AAGN V+ KP+E    
Sbjct: 146 -AKQVRDVLG---EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSL 201

Query: 211 TSSL-LAKLLEDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAK 267
            +   +  + E       ++++ G  A+  A L  + +   + +TGS  V +++    A+
Sbjct: 202 IAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQ 261

Query: 268 HL---TPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAP 324
                 P+I E GG++  +VDST   +   R ++   +  + GQ C  +  +   +D A 
Sbjct: 262 REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAF-DSAGQRCSALRVLCVQEDVAD 320

Query: 325 KLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD--- 380
           +++  ++  ++E     P   + D+  +++      L + ++    + K +     D   
Sbjct: 321 RVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSR 380

Query: 381 --EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV--TVEKIEDSFDVIKSKPKPLAAYF 436
             +    +APT L ++ DD   + EE+FGP+L +V     +++   D I      L    
Sbjct: 381 ACQHGTFVAPT-LFEL-DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGV 438

Query: 437 FSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG 485
            S  E   +   ++   G    N   V   V   PFGG G SG G   G
Sbjct: 439 HSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAG 487

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score =  109 bits (274), Expect = 2e-25
 Identities = 106/414 (25%), Positives = 180/414 (43%), Gaps = 40/414 (9%)

Query: 86  KSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY 145
            S+E R + ++  A ++EE +EE+ E I ++  KP +E      +M     K+A+    Y
Sbjct: 56  LSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEAATEVTAMIN---KIAISIQAY 112

Query: 146 WTKPEKAKTSLTTYPSSAEIIS-EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKP 204
               E+     +     A ++   P GVV V   +N+P  L    ++ A+ AGN VV KP
Sbjct: 113 ---HERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKP 169

Query: 205 SEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVM 262
           SE+ P  + L  KL +   +    + +V+G      AL      D +L+TGS   G ++ 
Sbjct: 170 SELTPWVAELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLH 229

Query: 263 AAAAKHLTPVI-LELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
              A     ++ LE+GG +P V+D   ++      II   +++  GQ C     ++  + 
Sbjct: 230 RQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFIS-AGQRCTCARRLLVPQG 288

Query: 322 FAPKLIDSLRNELKE----------------FFGKNPMESKDLSRIVNPFHFARLASLLD 365
                 D+    L                  F G   + S+  ++       A  A LL 
Sbjct: 289 ---AQGDAFLARLVAVAKRLTVGRWDAEPQPFMG--AVISEQAAQ----GLVAAQAQLLA 339

Query: 366 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVI 425
               S  ++   Q       + P I +DV   + +  EE FGPLL +V  +  +++  + 
Sbjct: 340 LGGKS--LLEMTQLQAGTGLLTPGI-IDVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLA 396

Query: 426 KSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESG 479
            +    L+A   SDD +   +F+  I AG + +N  +   + S+ PFGGVG SG
Sbjct: 397 NNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGAS-SAAPFGGVGASG 449

Length = 487

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score =  108 bits (270), Expect = 4e-25
 Identities = 88/349 (25%), Positives = 151/349 (43%), Gaps = 18/349 (5%)

Query: 166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VD 224
           I +PLGV   I+ +N+P ++ L     AIA GN  VLKPSE  P+ +  LA+L  +    
Sbjct: 133 IRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAP 192

Query: 225 NSAVRVVEGAVAETSALLEQKWDK-ILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283
           +  + VV G       LLE    K + + GS  +GR +    + H   V    G K+  V
Sbjct: 193 DGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMV 252

Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYII---TTKDFAPKLIDSLRNELKEFFGK 340
           V    +       ++   + A  GQ C+ +   +      ++ P++ +    +++   G 
Sbjct: 253 VMPDADKDAAADALVGAAYGAA-GQRCMAISAAVLVGAADEWVPEIRERAE-KIRIGPGD 310

Query: 341 NPMESKDLSRIVNPFHFARLASLLDE------DKVSDKIVYGGQRDEKQLKIAPTILLDV 394
           +P    ++  ++ P    R+ASL+        + + D   Y     E+   + PT+L  V
Sbjct: 311 DP--GAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERV 368

Query: 395 PDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAG 454
           P      +EEIFGP+L ++  + +E++  +I + P       F+ D    + F   I  G
Sbjct: 369 PPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVG 428

Query: 455 GIVFNDTIVHTTVSSLPFGGVGESGMGSYH--GKFSFDAFSHKKAVLYR 501
            +  N  I    +    F G  +S  G +H  GK     ++  K V  R
Sbjct: 429 QVGVNVPI-PVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTR 476

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score =  105 bits (264), Expect = 3e-24
 Identities = 110/410 (26%), Positives = 186/410 (45%), Gaps = 34/410 (8%)

Query: 87  SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYW 146
           S E R++ +Q  A ++EE++E +   I ++  KP +ET     SM     K+A+    Y 
Sbjct: 55  SLEERIAVVQRFAALLEERKEALARVIARETGKPLWETRTEVASMIG---KVAISIKAY- 110

Query: 147 TKPEKAKTSLTTYPSSAEIIS-EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 205
              E+   S    P    ++   P GVV V   +N+P  L    ++ A+ AGN VV KPS
Sbjct: 111 --HERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPS 168

Query: 206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMA 263
           E+ P  +    KL E   +    + +V+GA     AL      D +L+TGS   G ++  
Sbjct: 169 ELTPWVAEETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHR 228

Query: 264 AAAKHLTPVI-LELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACI----------- 311
             A     ++ LE+GG +P +VD   ++      II   +++  GQ C            
Sbjct: 229 QFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFIS-AGQRCTCARRLLVPDGA 287

Query: 312 -GVDYIITTKDFAPKL-IDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
            G  ++    + A +L + +   E + F G   + S   ++ +     A  A LL     
Sbjct: 288 QGDAFLARLVEVAERLTVGAWDAEPQPFMG--AVISLQAAQRL----LAAQAKLLALGGK 341

Query: 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP 429
           S  ++   Q D     + P I +DV   + +  EE FGPLL ++  +  +++  +  +  
Sbjct: 342 S--LLAMRQLDPGAALLTPGI-IDVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTR 398

Query: 430 KPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESG 479
             L+A   SDD ++   F+  I AG + +N  +   + S+ PFGG+G SG
Sbjct: 399 FGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGAS-SAAPFGGIGASG 447

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score =  105 bits (263), Expect = 3e-24
 Identities = 109/458 (23%), Positives = 190/458 (41%), Gaps = 54/458 (11%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           D+E A  L       +   +  + ++R  +++ I   +  + EE+ + I +++ KP  + 
Sbjct: 30  DIENALQLAAA---GFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQA 86

Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAE-----IISEPLGVVLVISTW 179
             +E++ + + C         W   E     L   P+  E     I   PLG +L I  W
Sbjct: 87  R-AEVAKSANLCD--------WYA-EHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPW 136

Query: 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAE-- 237
           N+P    +   +  + AGN  +LK +      + L+A++ +D      V     A  +  
Sbjct: 137 NFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGV 196

Query: 238 TSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRI 297
           +  + + +   +  TGS R G  + A A   L   +LELGG  P +V +  +L++  +  
Sbjct: 197 SQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAA 256

Query: 298 IAGKWMANNGQACIGVDYIIT--------TKDF-----APKLIDSLRNELKEFFGKNPME 344
           +AG++  N GQ C      I         T+ F     A K+ D    E     G  PM 
Sbjct: 257 VAGRYQ-NTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEE--NALG--PMA 311

Query: 345 SKDLSRIVNPFHFARLAS----LLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTI 400
             DL   ++    A LA     LL  +K++    Y           APT+L +V  + T 
Sbjct: 312 RFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNY----------YAPTVLANVTPEMTA 361

Query: 401 MKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFND 460
            +EE+FGP+  I   +  E + ++       L+A  F+ DE   ++    +  GG+  N 
Sbjct: 362 FREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFING 421

Query: 461 TIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
                + + + FGGV +SG G     F    F + + V
Sbjct: 422 --YCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTV 457

Length = 462

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score =  101 bits (255), Expect = 7e-23
 Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 19/327 (5%)

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNS 226
              GV + IS WN+P  +    +  A+AAGN V+ KP+E  P  ++   +LL E  V   
Sbjct: 166 HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRD 225

Query: 227 AVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRI---VMAAAAKHLTPVILELGGKSP 281
            +++V G   E    L    + D +++TGS    ++    +A     + P+I E GGK+ 
Sbjct: 226 VLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNA 285

Query: 282 AVVDSTINLQVTTRRIIAGKWMA--NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
            +VDST   +   + ++     A  + GQ C  +  +   ++ A + I+ L+  +     
Sbjct: 286 MIVDSTALPEQAVKDVVQS---AFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKV 342

Query: 340 KNPMESK-DLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ--LKIAPTILLDVPD 396
            +P +   D+  +++      L +  +  +    ++     D+      +AP I+  V  
Sbjct: 343 GDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYF-VAPGIIEIVGI 401

Query: 397 DSTIMKEEIFGPLLPIVT--VEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAG 454
               +  E+FGP+L ++    E ++++ + I +    L     S DE+  + + + + AG
Sbjct: 402 FD--LTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAG 459

Query: 455 GIVFNDTIVHTTVSSLPFGGVGESGMG 481
            +  N  I    V   PFGG G SG G
Sbjct: 460 NLYINRNITGAIVGRQPFGGWGLSGTG 486

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score = 98.0 bits (245), Expect = 8e-22
 Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 27/289 (9%)

Query: 169 PLGVVLVISTWNYPFLLSLDPVIG---AIAA--GNAVVLKPSEIAP----ATSSLLAKLL 219
           PLGVV VI+ +N+P       V G   AIA   GN VV KPS   P    A + ++A++L
Sbjct: 132 PLGVVGVITAFNFPV-----AVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVL 186

Query: 220 EDY-VDNSAVRVVEGAVAETSALLE-QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELG 277
           E   +  +   +V G      AL++  +   + +TGS  VGR V  A A      +LELG
Sbjct: 187 EKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELG 246

Query: 278 GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
           G +  +V    +L +  R ++    +   GQ C     +I  +    ++++ L+   K+ 
Sbjct: 247 GNNAIIVMEDADLDLAVRAVLFAA-VGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQV 305

Query: 338 FGKNPMESKDLSRIVNPFH----FARLASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTIL 391
              +P++   L   V P H         + ++E K     +++GG+  D     + PTI 
Sbjct: 306 RIGDPLDDGTL---VGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTI- 361

Query: 392 LDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD 440
           ++   D+ I+KEE F P+L ++  + +E++       P+ L++  F+ D
Sbjct: 362 VEGLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTD 410

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score = 95.9 bits (239), Expect = 1e-20
 Identities = 83/327 (25%), Positives = 155/327 (47%), Gaps = 17/327 (5%)

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNS 226
            PLG V+ IS WN+P  +    +  A+AAGN+V+ KP+E  P  ++   +LL E  V   
Sbjct: 235 RPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPG 294

Query: 227 AVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKH---LTPVILELGGKSP 281
            ++++ G      A L  + +   +++TGS  V R++    AK      P+I E GG++ 
Sbjct: 295 VLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNA 354

Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
            +VDS+   +     ++A  +  + GQ C  +  +   +D A +++  L+  + E    N
Sbjct: 355 MIVDSSALAEQVVADVLASAF-DSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGN 413

Query: 342 PME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLK---IAPTIL-LDVPD 396
           P   + D+  +++    A +   +   +   ++V+         K   +APT++ L+  D
Sbjct: 414 PDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLD 473

Query: 397 DSTIMKEEIFGPLLPIVTV--EKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAG 454
           +   ++ E+FGP+L +V    +++++  D I +    L     +  ++      +   AG
Sbjct: 474 E---LQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAG 530

Query: 455 GIVFNDTIVHTTVSSLPFGGVGESGMG 481
            +  N  IV   V   PFGG G SG G
Sbjct: 531 NLYVNRNIVGAVVGVQPFGGEGLSGTG 557

Length = 769

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score = 92.5 bits (229), Expect = 1e-19
 Identities = 97/348 (27%), Positives = 156/348 (44%), Gaps = 22/348 (6%)

Query: 166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL-LEDYVD 224
           I EPLGV   I  +N+P ++ L     A+  GN  +LKPSE  P  S +LA+L +E  + 
Sbjct: 246 IREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLP 305

Query: 225 NSAVRVVEGAVAETSALL-EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283
           +  + +V G     +A+  ++    + + GS   G  + A AA     +   +G K+  +
Sbjct: 306 DGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGL 365

Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYII---TTKDFAPKLIDSLRNELKEFFGK 340
           V    N+  T   ++A  + A  GQ C+ +  ++     K +  KL++  +  LK   G 
Sbjct: 366 VLPDANIDATLNALLAAGFGA-AGQRCMALSTVVFVGDAKSWEDKLVERAK-ALKVTCGS 423

Query: 341 NPMESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRD------EKQLKIAPTILL 392
            P    DL  +++     R+  L+ +  V D  K++  G RD      EK   I PTIL 
Sbjct: 424 EP--DADLGPVISKQAKERICRLI-QSGVDDGAKLLLDG-RDIVVPGYEKGNFIGPTILS 479

Query: 393 DVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNIS 452
            V  D    KEEIFGP+L  +     +++  +I        A  F+      ++F  +I 
Sbjct: 480 GVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIE 539

Query: 453 AGGIVFNDTIVHTTVSSLPFGGVGESGMG--SYHGKFSFDAFSHKKAV 498
           AG I  N  I    +    F G   S  G  +++GK   D F+  K V
Sbjct: 540 AGQIGINVPI-PVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLV 586

Length = 604

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 84.1 bits (209), Expect = 6e-17
 Identities = 96/338 (28%), Positives = 158/338 (46%), Gaps = 37/338 (10%)

Query: 167 SEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDN 225
            +PLG V+ IS WN+P  +    +  A+ AGN V+ KP+E  P  ++   +LL +  V  
Sbjct: 674 HKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPK 733

Query: 226 SAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHL---TPVILELGGKS 280
            A++++ G      A L  + +   +++TGS  V R++    AK      P+I E GG++
Sbjct: 734 DALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQN 793

Query: 281 PAVVDSTINL--QVTTRRIIAGKWMA--NNGQAC--IGVDYIITTKDFAPKLIDSLRNEL 334
             +VDS+  L  QV    +IA    A  + GQ C  + V  +   +D A +++  L+  +
Sbjct: 794 AMIVDSSA-LPEQV-VADVIAS---AFDSAGQRCSALRVLCL--QEDVADRVLTMLKGAM 846

Query: 335 KEFFGKNPMESKDLSRIVNPFHFAR-LASLLD---EDKVSDKIVYG---GQRDEKQLKIA 387
            E    +P     LS  V P   A   A++       + + ++V+        EK   +A
Sbjct: 847 DELRIGDP---WRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVA 903

Query: 388 PTIL-LDVPDDSTIMKEEIFGPLLPIVTV--EKIEDSFDVIKSKPKPLAAYFFSD-DEQM 443
           PT++ +D   D   ++ E+FGP+L +V    ++++   D I +    L     S  DE +
Sbjct: 904 PTLIEIDSISD---LEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETI 960

Query: 444 KKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG 481
                  I AG I  N  I+   V   PFGG G SG G
Sbjct: 961 -AHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTG 997

Length = 1208

>gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

 Score = 80.0 bits (197), Expect = 5e-16
 Identities = 72/323 (22%), Positives = 123/323 (38%), Gaps = 22/323 (6%)

Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED--YVDNS 226
           P G VLVI  +N+P  + L  + GA+A GN V++KP         ++ +LL     +   
Sbjct: 100 PYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPE 159

Query: 227 AVRVVEGAVAETSALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
            V ++ G      ALL       +L+TGS RV   +   A      + LEL G +  V+ 
Sbjct: 160 DVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDA--KQARIYLELAGFNWKVLG 217

Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFA-PKLIDSLRNELKEFFGKNPME 344
                             A +GQ C     +   ++++   L++    +LK    +  +E
Sbjct: 218 PDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVE----KLKALLARRKLE 273

Query: 345 SKDLSRIVNPFHFARLASLLDEDKV----SDKIVYGGQRDEKQLKIAPTILLDVPDDSTI 400
              L  +      A +A + +        S K +              + L  VP D  +
Sbjct: 274 DLLLGPVQTFTTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALF-VPIDEIL 332

Query: 401 MK-----EEIFGPLLPIVTVEK--IEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA 453
                  EEIFGP   +V  +K  +    ++++     L A  +S+D    +E + N+  
Sbjct: 333 KTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWV 392

Query: 454 GGIVFNDTIVHTTVSSLPFGGVG 476
            G  +      T V+     G G
Sbjct: 393 AGRTYAILRGRTGVAPNQNHGGG 415

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442

>gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

 Score = 76.5 bits (188), Expect = 6e-15
 Identities = 77/391 (19%), Positives = 127/391 (32%), Gaps = 65/391 (16%)

Query: 85  TKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDL---SKPPFETFISEISMTKSSC-KLAL 140
               E R   I +IAN + +  + +      +     +     +I+ +  ++S   K   
Sbjct: 12  VNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNID 71

Query: 141 KELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAV 200
            E          +  L        + + P+GV + I     P L  +   +  IA  N  
Sbjct: 72  TERGITASVGHIQDVLLPDNGETYVRAFPIGVTMHILPSTNP-LSGITSALRGIATRNQC 130

Query: 201 VLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQ------KWDKILYTGS 254
           + +P   AP T+  LA L +        +++   V   S  L +      K D I+ TG 
Sbjct: 131 IFRPHPSAPFTNRALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGG 190

Query: 255 PRVGRIVMAAAAKH--LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
                    AA KH    PVI    G SP VVD T + +  +  +   K+   N  AC  
Sbjct: 191 RDAVD----AAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFDQN--ACAS 244

Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
              +    D    L +  + +L     K P E+K LS+   P                  
Sbjct: 245 EQNLYVVDDVLDPLYEEFKLKLVVEGLKVPQETKPLSKETTPSF---------------- 288

Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKI----EDSFDVIKSK 428
                                  D++     E   PL     V  +    E+++ +I+S 
Sbjct: 289 ----------------------DDEAL----ESMTPLECQFRVLDVISAVENAWMIIESG 322

Query: 429 PKPLAAYFFSDDEQMKKEFVQNISAGGIVFN 459
             P     ++       +FVQ I       N
Sbjct: 323 GGPHTRCVYTHKINKVDDFVQYIDTASFYPN 353

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score = 76.8 bits (189), Expect = 8e-15
 Identities = 69/283 (24%), Positives = 133/283 (46%), Gaps = 19/283 (6%)

Query: 169 PLGVVLVISTWNYP-FLLSLDPVIGAIAAGNAVVLKPSEIAP----ATSSLLAKLLEDYV 223
           PLG+V VI+ +N+P  +L  +  I A+  GN VV K +   P    A + L+A++LE   
Sbjct: 154 PLGIVGVITAFNFPCAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNN 212

Query: 224 DNSAV--RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
              A+      GA    +   + +   + +TGS +VG +V           +LEL G + 
Sbjct: 213 LPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGNNA 272

Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
            +V    ++Q+  R ++    +   GQ C     ++  +     +++ L    K+    +
Sbjct: 273 IIVMDDADIQLAVRSVLFAA-VGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGD 331

Query: 342 PMESKDLSRIVNPFHFARLASLLDE-----DKVSDKIVYGGQRDEKQLK-IAPTILLDVP 395
           P+E   L   + P H        ++          KI+ GG   E +   + PTI+ ++ 
Sbjct: 332 PLEKGTL---LGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EIS 387

Query: 396 DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFS 438
            D+ ++KEE+FGP+L ++  + +E++ ++  S P+ L++  F+
Sbjct: 388 PDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFT 430

Length = 508

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score = 75.6 bits (186), Expect = 2e-14
 Identities = 86/328 (26%), Positives = 145/328 (44%), Gaps = 31/328 (9%)

Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKP-SEIAPATSSLLAKLLEDYVDNSA 227
           PLGVVL I  +NYP  L++  +  A+ AGNAVVLKP ++ A A   ++            
Sbjct: 158 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGL 217

Query: 228 VRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAVV 284
           +  V G  +E    L      + I +TG    G   +A + K  + P+ +ELGGK   +V
Sbjct: 218 ISCVTGKGSEIGDFLTMHPGVNCISFTG----GDTGIAISKKAGMVPLQMELGGKDACIV 273

Query: 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME 344
               +L +    II G + + +GQ C  V  ++  +  A  L++ +  ++ +     P +
Sbjct: 274 LEDADLDLAAANIIKGGF-SYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPED 332

Query: 345 SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEE 404
             D++ +V+      +  L+ + K          + E  L I P +L +V  D  I  EE
Sbjct: 333 DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNL-IWPLLLDNVRPDMRIAWEE 391

Query: 405 IFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVH 464
            FGP+LP++ +  +E+      +    L    F+ D          I+   I+ +D +  
Sbjct: 392 PFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD----------INK-AILISDAMET 440

Query: 465 TTVS----------SLPFGGVGESGMGS 482
            TV             PF G+ +SG+GS
Sbjct: 441 GTVQINSAPARGPDHFPFQGLKDSGIGS 468

Length = 496

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 75.8 bits (187), Expect = 3e-14
 Identities = 93/358 (25%), Positives = 151/358 (42%), Gaps = 76/358 (21%)

Query: 169  PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNSA 227
            PLG V+ IS WN+P  +    V  A+AAGN+V+ KP+E  P  ++   ++L E  V    
Sbjct: 768  PLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGV 827

Query: 228  VRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHL------TPVILELGGK 279
            V+++ G      A L  + +   +++TGS  V R++    A  L       P+I E GG+
Sbjct: 828  VQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQ 887

Query: 280  SPAVVDST-INLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
            +  +VDS+ +  QV    ++A  +  + GQ C  +  +    D A + +  LR  + E  
Sbjct: 888  NAMIVDSSALTEQVVA-DVLASAF-DSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECR 945

Query: 339  GKNPMESKDLSRIVNPFHFARLASLLDED------------KVSDKIVYGGQRDEKQLK- 385
              NP     LS  + P        ++D +            +   + V+   R+  +   
Sbjct: 946  MGNP---DRLSTDIGP--------VIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQ 994

Query: 386  ----IAPT-ILLDVPDDSTIMKEEIFGPLLPIV---------TVEKIEDS-----FDV-- 424
                + PT I LD  D+   +K E+FGP+L +V          +E+I  S       V  
Sbjct: 995  SGTFVPPTLIELDSFDE---LKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHT 1051

Query: 425  -IKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG 481
             I              DE + +    +   G +  N  +V   V   PFGG G SG G
Sbjct: 1052 RI--------------DETIAQ-VTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTG 1094

Length = 1318

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score = 70.6 bits (173), Expect = 7e-13
 Identities = 82/343 (23%), Positives = 138/343 (40%), Gaps = 26/343 (7%)

Query: 169 PL-GVVLVISTWNYPFLLSLDPVIGAIA-AGNAVVLKPSEIAPATSSLLAKLLEDY-VDN 225
           PL G V  IS +N  F      + GA A  GN V+ KPS+ A  ++ L+ ++LE+  +  
Sbjct: 168 PLEGFVYAISPFN--FTAIAGNLAGAPALMGNTVIWKPSDTAMLSNYLVMRILEEAGLPP 225

Query: 226 SAVRVV--EGAVAETSALLEQKWDKILYTGSPRV-----GRIVMAAAAKHLTPVIL-ELG 277
             +  V  +G +   + L +     I +TGS         ++       H  P I+ E G
Sbjct: 226 GVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQNLDRYHNFPRIVGETG 285

Query: 278 GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
           GK   VV  + +++      I G +    GQ C     +       P+    L  EL   
Sbjct: 286 GKDFHVVHPSADVEHVVSGTIRGAF-EYQGQKCSACSRLYVPHSLWPRFKGRLLAELSRV 344

Query: 338 FGKNPME--SKDLSRIVNPFHFARLASLLDEDKVSD---KIVYGGQRDEKQ-LKIAPTIL 391
                 +     +  +++   FA++   ++  K       I+ GG+ D+     + PT++
Sbjct: 345 -KVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDDSVGYFVEPTVV 403

Query: 392 LDVPDDSTIMKEEIFGPLLPIVTV--EKIEDSFDVI-KSKPKPLAAYFFSDDEQ--MKKE 446
                   +MKEEIFGP+L +     +K ++  D++  +    L    F+ D    ++ +
Sbjct: 404 ESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDSTTSYGLTGAVFAKDRDAILEAD 463

Query: 447 FVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF 489
            V   +AG    ND      V   PFGG   SG     G    
Sbjct: 464 KVLRFAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGGPHN 506

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 69.8 bits (172), Expect = 2e-12
 Identities = 84/328 (25%), Positives = 147/328 (44%), Gaps = 19/328 (5%)

Query: 168  EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNS 226
               GV + IS WN+P  + L  V  A+AAGN V+ KP+E  P  ++   KLL E  +   
Sbjct: 683  HGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKD 742

Query: 227  AVRVVEGAVAET-SALLEQ-KWDKILYTGSPRVGRIV-MAAAAKH--LTPVILELGGKSP 281
             ++++ G  A   +AL    +   + +TGS    RI+    AA+   + P+I E GG++ 
Sbjct: 743  VLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNA 802

Query: 282  AVVDSTINL-QVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
             +VDST    QV    ++   +  + GQ C  +  +   +D A ++I+ L+  + E    
Sbjct: 803  MIVDSTALPEQV-VDDVVTSAF-RSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVG 860

Query: 341  NPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLK---IAPTIL-LDVP 395
            +P   S D+  +++    A L + ++  K   +++              +APT   +D  
Sbjct: 861  DPRLLSTDVGPVIDAEAKANLDAHIERMKREARLLAQLPLPAGTENGHFVAPTAFEIDSI 920

Query: 396  DDSTIMKEEIFGPLLPIVTVEK--IEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA 453
                 ++ E+FGP+L ++  +   ++   D I +    L     S  E+        +  
Sbjct: 921  SQ---LEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRV 977

Query: 454  GGIVFNDTIVHTTVSSLPFGGVGESGMG 481
            G +  N   +   V   PFGG G SG G
Sbjct: 978  GNVYVNRNQIGAVVGVQPFGGQGLSGTG 1005

Length = 1038

>gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase

 Score = 62.6 bits (153), Expect = 2e-10
 Identities = 68/291 (23%), Positives = 107/291 (36%), Gaps = 54/291 (18%)

Query: 169 PLGVVLVISTWNYPFLLSLDPVIG-----AIAAGNAVVLKPSEIAPATSSLLAKLLEDYV 223
           PLG V V    N+P   S   V G     A+AAG  VV+K     P TS L+A+ +   +
Sbjct: 105 PLGPVAVFGASNFPLAFS---VAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAAL 161

Query: 224 DNSA-----VRVVEGAVAETS-ALLEQKWDK-ILYTGSPRVGRIVMAAAAKHLT--PVIL 274
             +        +++G   E   AL++    K + +TGS R GR +  AAA      P   
Sbjct: 162 RATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYA 221

Query: 275 ELGGKSPAVVDSTINLQVTTRRI-------IAGKWMA----NNGQACI--GVDYIITTKD 321
           ELG         ++N               IA  ++       GQ C   G+  +     
Sbjct: 222 ELG---------SVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPA 272

Query: 322 FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE 381
                I +L   L        M +     I   +    + +L     V   ++ GG   E
Sbjct: 273 GD-AFIAALAEALAA-APAQTMLT---PGIAEAYR-QGVEALAAAPGVR--VLAGGAAAE 324

Query: 382 KQLKIAPTILLDVPDDSTIMK-----EEIFGPLLPIVTVEKIEDSFDVIKS 427
              + APT+     D +  +      EE+FGP   +V  +   +   V ++
Sbjct: 325 GGNQAAPTLF--KVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEA 373

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454

>gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

 Score = 60.7 bits (147), Expect = 8e-10
 Identities = 64/280 (22%), Positives = 108/280 (38%), Gaps = 49/280 (17%)

Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED-YV 223
           II+EP+GVV  I+    P    +   + ++   N+++  P   A   +   A LL    V
Sbjct: 91  IIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAV 150

Query: 224 DNSAVRVVEGAVAETSALLEQK------WDKILYTGSPRVGRIVMAAAAKHLTPVILELG 277
              A   + G +   S  L Q+         +L TG P     V+ AA     P I    
Sbjct: 151 AAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGA 206

Query: 278 GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
           G +P V+D T +++   + I+  K   N          +I   + +  ++DS+ +E+   
Sbjct: 207 GNTPVVIDETADIKRAVQSIVKSKTFDNG---------VICASEQSVIVVDSVYDEVMRL 257

Query: 338 F---GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDV 394
           F   G   + +++L + V P        +L    V+  IV  GQ      KIA    L V
Sbjct: 258 FEGQGAYKLTAEELQQ-VQPV-------ILKNGDVNRDIV--GQ---DAYKIAAAAGLKV 304

Query: 395 PDDSTIM-------------KEEIFGPLLPIVTVEKIEDS 421
           P ++ I+               E   P+L +       D+
Sbjct: 305 PQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADA 344

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score = 60.3 bits (147), Expect = 1e-09
 Identities = 83/350 (23%), Positives = 135/350 (38%), Gaps = 61/350 (17%)

Query: 169 PL-GVVLVISTWNYPFLLSLDPVIGAIAA---------GNAVVLKPSEIAPATSSLLAKL 218
           PL G V  +S +N+           AI           GN V+ KPS+ A  ++ L+ K+
Sbjct: 169 PLEGFVYAVSPFNFT----------AIGGNLAGAPALMGNVVLWKPSDTAVLSNYLVYKI 218

Query: 219 LED-----------YVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAK 267
           LE+             D   V    G     S  L      + +TGS    + +     +
Sbjct: 219 LEEAGLPPGVINFVPGDGPVV----GDTVLASPHLA----GLHFTGSTPTFKSLWKQIGE 270

Query: 268 HLT-----PVIL-ELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
           +L      P I+ E GGK+  +V  + ++       + G +    GQ C         + 
Sbjct: 271 NLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAF-EYQGQKCSAASRAYVPES 329

Query: 322 FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPF----HFARLASLLDEDKVSD--KIVY 375
             P++ + L  ELKE    +P    D S  +        F R+   +D  K     +I+ 
Sbjct: 330 LWPEVKERLLEELKEIKMGDPD---DFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIA 386

Query: 376 GGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVE--KIEDSFDVI-KSKPKP 431
           GG+ D      + PT++        +M EEIFGP+L +        E++ +++  + P  
Sbjct: 387 GGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYA 446

Query: 432 LAAYFFSDDEQMKKEFVQNI--SAGGIVFNDTIVHTTVSSLPFGGVGESG 479
           L    F+ D +  +E    +  +AG    ND      V   PFGG   SG
Sbjct: 447 LTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASG 496

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

>gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN

 Score = 55.2 bits (133), Expect = 5e-08
 Identities = 65/334 (19%), Positives = 129/334 (38%), Gaps = 27/334 (8%)

Query: 171 GVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED--YVDNSAV 228
           GV + I+ +N+P    L+    A  AG   + KP+      +  L + + +   +   ++
Sbjct: 146 GVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSL 205

Query: 229 RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMA--AAAKHLTPVILELGGKSPAVV-- 284
           +++ G+  +    L+ + D + +TGS      + A     +       E    + A++  
Sbjct: 206 QLICGSAGDLLDHLDHR-DVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGE 264

Query: 285 DSTINLQVTTR--RIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNP 342
           D+T +        + I  +     GQ C  +  +I  K     ++ +L+  L +    +P
Sbjct: 265 DATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDP 324

Query: 343 M-ESKDLSRIVNPFH----FARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILL-DVPD 396
             E  D+  +V+        A +A+LL       ++  GG          PT+LL + P 
Sbjct: 325 REEGVDMGPLVSLEQRADVEAAVAALLAA---GAEVRLGGPGRLDGAFFPPTLLLAEDPW 381

Query: 397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA--G 454
              +   E FGP+          ++  +       L A   + D +  ++F+  ++   G
Sbjct: 382 AGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHG 441

Query: 455 GIVF--NDTIVHTT--VSSLP---FGGVGESGMG 481
            +     D    +T   S LP    GG G +G G
Sbjct: 442 RLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGG 475

This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663

>gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like

 Score = 54.2 bits (131), Expect = 9e-08
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 22/244 (9%)

Query: 191 IGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYV------DNSAVRVVEGAVAETSALLE- 243
           I  +AAGNAVV  P   A   S+   +L+   +      DN  V V E  +  T+ L+  
Sbjct: 119 ISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIETTNELMAH 178

Query: 244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
              + ++ TG P V +  +++  K     I    G  P VVD T +++   R I+ G   
Sbjct: 179 PDINLLVVTGGPAVVKAALSSGKK----AIGAGAGNPPVVVDETADIEKAARDIVQGASF 234

Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
            NN   CI    +I     A  LI +++     +   +    + L  ++     A     
Sbjct: 235 DNN-LPCIAEKEVIAVDSVADYLIAAMQRN-GAYVLNDEQAEQLLEVVLLTNKGATPNKK 292

Query: 364 L---DEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIED 420
               D  K+      G +           I+++   D   + EE   P+LP+V V+  ++
Sbjct: 293 WVGKDASKILKAA--GIEVPAD----IRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDE 346

Query: 421 SFDV 424
           + ++
Sbjct: 347 AIEL 350

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429

>gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

 Score = 46.3 bits (111), Expect = 3e-05
 Identities = 83/352 (23%), Positives = 138/352 (39%), Gaps = 88/352 (25%)

Query: 166 ISEPLGVVL-VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVD 224
           I+EP+GV+  +I + N P   ++   + A+   NA++  P   A   S   AK++ +   
Sbjct: 92  IAEPVGVIAALIPSTN-PTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMRE--- 147

Query: 225 NSAVRVVEGA------------VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTP 271
            +AV    GA            +  T  L++    D IL TG P     ++ AA     P
Sbjct: 148 -AAVAA--GAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGP----GMVKAAYSSGKP 200

Query: 272 VILELG---GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLID 328
            I   G   G  PA +D T +++   + II  K   +NG  C     +I   +   ++  
Sbjct: 201 AI---GVGPGNVPAYIDETADIKRAVKDIILSKTF-DNGTICASEQSVIVDDEIYDEVRA 256

Query: 329 SLRNELKE---FFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLK 385
               ELK    +F  N  E + L + +            D   ++  IV  G+      K
Sbjct: 257 ----ELKRRGAYF-LNEEEKEKLEKALFD----------DGGTLNPDIV--GK---SAQK 296

Query: 386 IAPTILLDVPDDSTIM--------KEEIF-----GPLLPIVTVEKIEDSFDVIKSKPKPL 432
           IA    ++VP+D+ ++         EE        P+L     E  E++ +  +     L
Sbjct: 297 IAELAGIEVPEDTKVLVAEETGVGPEEPLSREKLSPVLAFYRAEDFEEALEKARE----L 352

Query: 433 AAY--------FFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVG 476
             Y          S+DE++ +EF   +    I+ N      T SS   GG+G
Sbjct: 353 LEYGGAGHTAVIHSNDEEVIEEFALRMPVSRILVN------TPSS--LGGIG 396

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436

>gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional

 Score = 45.7 bits (109), Expect = 5e-05
 Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 42/249 (16%)

Query: 191 IGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYV------DNSAVRVVEGAVAETSALLE- 243
           I  +AAGN+VV  P   A   S    +LL + +      +N  V V E  +     L++ 
Sbjct: 151 ISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKH 210

Query: 244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
                ++ TG P V +  M +  K     I    G  P VVD T +++   R I+ G   
Sbjct: 211 PGIALLVVTGGPAVVKAAMKSGKK----AIGAGAGNPPVVVDETADIEKAARDIVKGASF 266

Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
            NN   CI    +I        ++DS+ +EL     KN       + ++      +L  +
Sbjct: 267 DNN-LPCIAEKEVI--------VVDSVADELMRLMEKNG------AVLLTAEQAEKLQKV 311

Query: 364 -LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIM-----------KEEIFGPLLP 411
            L      +K   G  +D    KI     ++VP D+ ++             E+  P+LP
Sbjct: 312 VLKNGGTVNKKWVG--KDAA--KILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLP 367

Query: 412 IVTVEKIED 420
           +V V+ +++
Sbjct: 368 VVRVKDVDE 376

Length = 465

>gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

 Score = 45.5 bits (108), Expect = 5e-05
 Identities = 66/299 (22%), Positives = 99/299 (33%), Gaps = 71/299 (23%)

Query: 169 PLGVVLVIS-----TWN-YPFLLSLDPVIGAIAAGNAVVLKPSEIA-------------- 208
           P GV LVI      TWN YP L +      ++A GN V++KP   A              
Sbjct: 193 PRGVALVIGCSTFPTWNGYPGLFA------SLATGNPVIVKPHPAAILPLAITVQVAREV 246

Query: 209 -------PATSSLLAKLLED-----YVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPR 256
                  P   +L A   E+           VR+++                  +TGS  
Sbjct: 247 LAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIID------------------FTGSNA 288

Query: 257 VGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYI 316
            G  + A A +    V  E  G +  VVDST +L+   R  +A      +GQ C     I
Sbjct: 289 FGDWLEANARQAQ--VYTEKAGVNTVVVDSTDDLKAMLRN-LAFSLSLYSGQMCTTPQNI 345

Query: 317 ITTKD---------FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARL--ASLLD 365
              +D            ++   L   +          +  L  I +P   AR+  A  L 
Sbjct: 346 YVPRDGIQTDDGRKSFDEVAADLAAAIDGLLADPARAAALLGAIQSPDTLARIAEARQLG 405

Query: 366 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDV 424
           E  +                  P +L     D     EE FGP+  +V  +  + S ++
Sbjct: 406 E-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIEL 463

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549

>gnl|CDD|130164 TIGR01092, P5CS, delta l-pyrroline-5-carboxylate synthetase

 Score = 45.3 bits (107), Expect = 7e-05
 Identities = 63/299 (21%), Positives = 123/299 (41%), Gaps = 37/299 (12%)

Query: 82  SRK--TKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF----ETFISEISMTK-- 133
           SR     S E R   +  IA+ +E+ E+EI+    KD++         + ++ +SM+   
Sbjct: 299 SRMLQALSSEQRKEILHDIADALEDNEDEILAENKKDVAAAQGAGYAASLVARLSMSPSK 358

Query: 134 -SSCKLALKELKYWTKPEKAKTSLTTYPSSAEI--ISEPLGVVLVISTWNYPFLLSLDPV 190
            SS  ++L++L     P       T    +  +   S P+GV+L++       L+ +  +
Sbjct: 359 ISSLAISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESRPDALVQIASL 418

Query: 191 IGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSAL-----LEQK 245
             AI +GN ++LK  + A  ++++L K++ + +     + + G V     +     L+  
Sbjct: 419 --AIRSGNGLLLKGGKEAARSNAILHKVITEAIPIHVGKKLIGLVTSREEIPDLLKLDDV 476

Query: 246 WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMAN 305
            D ++  GS ++   +  +      PV+    G     VD + ++ +  R +   K   +
Sbjct: 477 IDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKSASVDMAKRIVRDAK--CD 531

Query: 306 NGQACIGVDYIITTKDFAP-----KLIDSLRNELKEFFGK---------NPMESKDLSR 350
              AC  ++ ++  KD         LID LR E     G          N  E+K    
Sbjct: 532 YPAACNAMETLLVHKDLLRNGLLDDLIDMLRTEGVTIHGGPRFAAYLTFNISETKSFRT 590

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region [Amino acid biosynthesis, Glutamate family]. Length = 715

>gnl|CDD|131570 TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (acetylating)

 Score = 45.2 bits (107), Expect = 7e-05
 Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 18/196 (9%)

Query: 166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDN 225
           I+ P+GVV  +     P   ++   + +I A NA+V  P   A        KL+    + 
Sbjct: 101 IAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEE 160

Query: 226 SAVRVVEGAVA--------ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILEL 276
           +     EGA+          T+ L++ K    IL TG   + +    AA    TP I   
Sbjct: 161 AGAP--EGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVK----AAYSSGTPAIGVG 214

Query: 277 GGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE 336
            G  PA ++ T N++   R II  K   +NG  C     II  +     +++ L+ +   
Sbjct: 215 PGNGPAYIERTANVKKAVRDIIDSKTF-DNGTICASEQSIIVEECNKDAVVEELKKQGGY 273

Query: 337 FFGKNPMESKDLSRIV 352
           F      E++ L + +
Sbjct: 274 FLTAE--EAEKLGKFI 287

Length = 488

>gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN

 Score = 44.1 bits (104), Expect = 2e-04
 Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 40/297 (13%)

Query: 146 WTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS-----TWN-YPFLLSLDPVIGAIAAGNA 199
           W KP+     L        I+  P G+ LVI      TWN YP L +      ++A GN 
Sbjct: 173 WEKPQGKNDPLKL-KKRFTIV--PRGIALVIGCSTFPTWNTYPGLFA------SLATGNP 223

Query: 200 VVLKPSE--IAPATSSL-LAK--LLEDYVDNSAVRVV----EGAVAETSALLEQKWDKIL 250
           V++KP    I P   ++ +A+  L E   D + V +         A+  A  +     I 
Sbjct: 224 VLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLA-TDPAVRIID 282

Query: 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQAC 310
           +TGS   G+ +   A +    V  E  G +  +++ST + +   R  +A      +GQ C
Sbjct: 283 FTGSNAFGQWLEQNARQAQ--VYTEKAGVNTVIIESTDDYKAMLRN-LAFSLSLYSGQMC 339

Query: 311 IGVDYIITTKDFA---------PKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLA 361
                I+  +D            ++   L   +    G     +  L  I +P   AR+A
Sbjct: 340 TTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGLLGDPARATAVLGAIQSPDTLARIA 399

Query: 362 SL--LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVE 416
               L E  ++   +   +    +++    +  D  D++  M +E FGP+  +V V+
Sbjct: 400 EARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYM-QERFGPIAFVVAVD 455

This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	543
PLN02174	484	aldehyde dehydrogenase family 3 member H1	100.0
KOG2450	501	consensus Aldehyde dehydrogenase [Energy productio	100.0
KOG2451	503	consensus Aldehyde dehydrogenase [Energy productio	100.0
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	100.0
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	100.0
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	100.0
PLN02203	484	aldehyde dehydrogenase	100.0
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	100.0
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	100.0
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	100.0
PLN02766	501	coniferyl-aldehyde dehydrogenase	100.0
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	100.0
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	100.0
PLN02278	498	succinic semialdehyde dehydrogenase	100.0
PLN02467	503	betaine aldehyde dehydrogenase	100.0
KOG2456	477	consensus Aldehyde dehydrogenase [Energy productio	100.0
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	100.0
PLN02466	538	aldehyde dehydrogenase family 2 member	100.0
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	100.0
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	100.0
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	100.0
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	100.0
PLN02315	508	aldehyde dehydrogenase family 7 member	100.0
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	100.0
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	100.0
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	100.0
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	100.0
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	100.0
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	100.0
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	100.0
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	100.0
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	100.0
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	100.0
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	100.0
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	100.0
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	100.0
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	100.0
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	100.0
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	100.0
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	100.0
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	100.0
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	100.0
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	100.0
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	100.0
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	100.0
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	100.0
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	100.0
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	100.0
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	100.0
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	100.0
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	100.0
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	100.0
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	100.0
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	100.0
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	100.0
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	100.0
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	100.0
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	100.0
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	100.0
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	100.0
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	100.0
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	100.0
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	100.0
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	100.0
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	100.0
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	100.0
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	100.0
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	100.0
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	100.0
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	100.0
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	100.0
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	100.0
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	100.0
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	100.0
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	100.0
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	100.0
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	100.0
PRK11903	521	aldehyde dehydrogenase; Provisional	100.0
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	100.0
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	100.0
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	100.0
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	100.0
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	100.0
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	100.0
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	100.0
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	100.0
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	100.0
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	100.0
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	100.0
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	100.0
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	100.0
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	100.0
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	100.0
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	100.0
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	100.0
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	100.0
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	100.0
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	100.0
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	100.0
PRK10090	409	aldehyde dehydrogenase A; Provisional	100.0
KOG2454	583	consensus Betaine aldehyde dehydrogenase [Energy p	100.0
PRK11809	1318	putA trifunctional transcriptional regulator/proli	100.0
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	100.0
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	100.0
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	100.0
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	100.0
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	100.0
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	100.0
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	100.0
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	100.0
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	100.0
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	100.0
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	100.0
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	100.0
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	100.0
KOG2452	881	consensus Formyltetrahydrofolate dehydrogenase [Nu	100.0
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	100.0
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	100.0
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	100.0
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	100.0
KOG2453	507	consensus Aldehyde dehydrogenase [Energy productio	100.0
KOG2455	561	consensus Delta-1-pyrroline-5-carboxylate dehydrog	100.0
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	100.0
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	100.0
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	100.0
cd07080	422	ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac	100.0
KOG4165	433	consensus Gamma-glutamyl phosphate reductase [Amin	99.97
PF05893	399	LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086	99.76
KOG2449	157	consensus Methylmalonate semialdehyde dehydrogenas	99.39
PF07368	215	DUF1487: Protein of unknown function (DUF1487); In	99.13
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	98.3
PRK13770	416	histidinol dehydrogenase; Provisional	96.29
PF00815	412	Histidinol_dh: Histidinol dehydrogenase; InterPro:	96.24
cd06572	390	Histidinol_dh Histidinol dehydrogenase, HisD, E.C	95.98
TIGR00069	393	hisD histidinol dehydrogenase. This model describe	95.69
PRK11809	1318	putA trifunctional transcriptional regulator/proli	95.55
COG0141	425	HisD Histidinol dehydrogenase [Amino acid transpor	95.43
PRK12447	426	histidinol dehydrogenase; Reviewed	94.78
PRK00877	425	hisD bifunctional histidinal dehydrogenase/ histid	94.51
PRK13769	368	histidinol dehydrogenase; Provisional	94.44
PLN02926	431	histidinol dehydrogenase	94.26

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=100.00  E-value=1.7e-104  Score=836.63  Aligned_cols=477  Identities=66%  Similarity=1.101  Sum_probs=446.1

Q ss_pred             CCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHH
Q 009109           64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL  143 (543)
Q Consensus        64 a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~  143 (543)
                      ...+|+++++++|++||++|+.+++.+|.++|++++++|++|+++|++++++|+|||..++...|+..+++.++|+++.+
T Consensus         7 ~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~   86 (484)
T PLN02174          7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL   86 (484)
T ss_pred             cCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57889999999999999999999999999999999999999999999999999999999987669999999999999999


Q ss_pred             hhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhc
Q 009109          144 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYV  223 (543)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~al  223 (543)
                      ++|.++..........+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++.+++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~~l  166 (484)
T PLN02174         87 KNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYL  166 (484)
T ss_pred             HHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            99887544332222234457899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEeecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcc
Q 009109          224 DNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM  303 (543)
Q Consensus       224 P~gvv~vv~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~  303 (543)
                      |+|+||+|+|+.+.+..|+++++|+|+||||+++|+.|++.++++++|+++|||||||+||++|||++.|++.+++++| 
T Consensus       167 p~gvv~vv~G~~~~~~~l~~~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f-  245 (484)
T PLN02174        167 DSSAVRVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKW-  245 (484)
T ss_pred             CCCEEEEEECChHHHHHHhcccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHh-
Confidence            9999999999777788888766999999999999999999999999999999999999999999999999999999998 


Q ss_pred             c-CCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCC
Q 009109          304 A-NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEK  382 (543)
Q Consensus       304 ~-~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~  382 (543)
                      . |+||.|++++|||||+++||+|+++|+++++++++|||.+++++||++++.+++++.++|+++.+++++++||..+..
T Consensus       246 ~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~ga~~~~GG~~~~~  325 (484)
T PLN02174        246 GCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVSDKIVYGGEKDRE  325 (484)
T ss_pred             hCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHcCCEEEECCCcCCC
Confidence            6 999999999999999999999999999999999999998888999999999999999999998667899999976556


Q ss_pred             CceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCc
Q 009109          383 QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTI  462 (543)
Q Consensus       383 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~  462 (543)
                      |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++.
T Consensus       326 g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~~  405 (484)
T PLN02174        326 NLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIA  405 (484)
T ss_pred             CCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCCc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEecCCCCCCCcCCCCChHHHHHHHHHhhhhhhHHHHHHhhcc
Q 009109          463 VHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIGWS  541 (543)
Q Consensus       463 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  541 (543)
                      .+...+.+||||+|.||+|+++|.+|+++||+.|+|++++.+.+.+++||||+.+|.++++++++..++++++-+++|+
T Consensus       406 ~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (484)
T PLN02174        406 VHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDIFKVLLGLS  484 (484)
T ss_pred             CCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEECCccCcccccCCCCChHHHHHHHHHHhhchhhhhhccccCC
Confidence            6555578999999999999999999999999999999887666789999999999999999999888888888888874

>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=3.5e-105  Score=802.70  Aligned_cols=466  Identities=26%  Similarity=0.401  Sum_probs=439.6

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQS   97 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~--~w~~~~~~~R~~iL~~   97 (543)
                      .++|||| +|.++.++++|+++        ||+||+++.++ +.++.+||+.||++||+||+  .|++++..+|..+|++
T Consensus        21 ~~lfin~-e~~~~~s~kt~~~~--------nP~tg~~i~~v-~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~   90 (501)
T KOG2450|consen   21 LGLFING-EFVDSVSGKTFPVV--------NPATGEVIAKV-AEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRK   90 (501)
T ss_pred             hheeecC-eeecccCCceeeee--------cCCCCCeEEEe-ccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHH
Confidence            5899999 99999999999999        88888888666 88999999999999999999  6999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEc
Q 009109           98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS  177 (543)
Q Consensus        98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~  177 (543)
                      +|+++++++++||.+.+.+.|||+.+++..++..+++.++|++.+.+...    ............++.++|+|||+.|+
T Consensus        91 ~Adlie~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~----~~~~~~~~~~~~yt~~eP~GV~G~I~  166 (501)
T KOG2450|consen   91 LADLIEQDADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIH----GSTIPTDGEFFAYTRREPIGVCGQII  166 (501)
T ss_pred             HHHHHHhhhHHHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcc----cccCCCCCceEEEecCCcceeeeEec
Confidence            99999999999999999999999999996799999999999999887641    12222233457899999999999999


Q ss_pred             CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCC
Q 009109          178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS  254 (543)
Q Consensus       178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS  254 (543)
                      |||||+....|+++|||++||+||+||++++|+++..+++++.++ +|+||+|+|+| +.+.+.+|++|+ ||.|.||||
T Consensus       167 pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGS  246 (501)
T KOG2450|consen  167 PWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGS  246 (501)
T ss_pred             cCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCC
Confidence            999999999999999999999999999999999999999999999 99999999999 889999999996 999999999


Q ss_pred             hHHHHHHHHHHh-cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHH
Q 009109          255 PRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE  333 (543)
Q Consensus       255 ~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~  333 (543)
                      +.+|+.|+++++ .++||++||||||+|.||++|||++.|++.+..+.| +|+||.|++.+|+|||++|||+|+++++++
T Consensus       247 t~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF-~nqGq~C~a~sR~~Vqe~iydefv~~~v~~  325 (501)
T KOG2450|consen  247 TPVGKEIMEAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIF-FNQGQCCTAGSRVFVQESIYDEFVEKFVAA  325 (501)
T ss_pred             CcchhHHhhhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhh-cccccccccCceeEEechHHHHHHHHHHHH
Confidence            999999999988 559999999999999999999999999999999999 999999999999999999999999999999


Q ss_pred             HHh-hcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccce
Q 009109          334 LKE-FFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPL  409 (543)
Q Consensus       334 ~~~-l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv  409 (543)
                      .++ +++|||.+ .+.+||.+++.|++++..||+.+++ |+++++||.+ .+.|+|+.|||+.++.++|.+++||+||||
T Consensus       326 a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPV  405 (501)
T KOG2450|consen  326 AKKKLKVGDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPV  405 (501)
T ss_pred             HhcccccCCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCce
Confidence            976 99999976 7899999999999999999999976 6799999966 468999999999999999999999999999


Q ss_pred             eeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHH
Q 009109          410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF  489 (543)
Q Consensus       410 l~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~  489 (543)
                      ++|++|++.||+|+++|++.|||+++|||+|.+++.++++++++|+||||++..  ..+..||||+|.||+||+.|.+++
T Consensus       406 v~v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~--~~~~~PfgG~K~SG~GRE~g~~~l  483 (501)
T KOG2450|consen  406 VVVLKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNV--FDAQVPFGGFKMSGIGRELGEYGL  483 (501)
T ss_pred             EEEEecCcHHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEecccc--ccccCCccccccccCCccccHHHH
Confidence            999999999999999999999999999999999999999999999999999875  678999999999999999999999


Q ss_pred             HHhhhceEEEEec
Q 009109          490 DAFSHKKAVLYRS  502 (543)
Q Consensus       490 ~~~~~~k~v~~~~  502 (543)
                      ++|++.|+|.++-
T Consensus       484 ~~ytevKtv~v~~  496 (501)
T KOG2450|consen  484 EAYTEVKTVTVKL  496 (501)
T ss_pred             hhcceeeEEEEeC
Confidence            9999999998863

>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=4.5e-104  Score=758.90  Aligned_cols=467  Identities=24%  Similarity=0.363  Sum_probs=441.6

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI   98 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~   98 (543)
                      ..|.||+| +|+++.++++|++.        ||++|+.++.+ +..+.+|.++||++|.+||.+|+.++..||.++|+++
T Consensus        23 ~~~~~igG-kWv~s~~~~tF~V~--------nPa~geii~~V-~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkw   92 (503)
T KOG2451|consen   23 RAQSYIGG-KWVDSPDNKTFEVD--------NPANGEIIGKV-ADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKW   92 (503)
T ss_pred             chhccccc-eeeccCCCCeeecc--------CCCccchhhcc-cCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence            68999999 99999999999988        88999999888 9999999999999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST  178 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p  178 (543)
                      .++|.+|.++|++++++|.|||+.|++ +||..+..+++||++.+++..+...   +.........+.++|+||+++|+|
T Consensus        93 y~Li~en~ddLa~iiTlE~GKpL~eA~-gEv~y~a~f~eWyAeEA~RvyGdii---~s~~~~rr~i~ikQPvGV~alItP  168 (503)
T KOG2451|consen   93 YELIMENKDDLATIITLENGKPLGEAK-GEVAYSAAFFEWYAEEARRVYGDII---PSLNPNRRLIVIKQPVGVVALITP  168 (503)
T ss_pred             HHHHHhchHHHHHHHhhhcCCchhhcc-ceeehhHHHHHHHHHHhhhhhcccc---CCCCCCceEEEEeccceeEEEecC
Confidence            999999999999999999999999998 4999999999999999998776543   222344577899999999999999


Q ss_pred             CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC----ChHHHHHHHhCC-CCEEEEe
Q 009109          179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG----AVAETSALLEQK-WDKILYT  252 (543)
Q Consensus       179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g----~~~~~~~L~~~~-v~~v~ft  252 (543)
                      ||||......|+.+||++||+||+|||+.||+++..++++..++ +|+|++|+|++    ..+.+.+|+.+| |+.|+||
T Consensus       169 WNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFT  248 (503)
T KOG2451|consen  169 WNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFT  248 (503)
T ss_pred             cCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEee
Confidence            99999999999999999999999999999999999999999999 99999999985    247899999997 9999999


Q ss_pred             CChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109          253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN  332 (543)
Q Consensus       253 GS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~  332 (543)
                      ||+.+|+.++.+++.+.|++.+|||||.|.||++|||||.|++.....+| -|+||.|.+.+|+|||++|||+|+++|.+
T Consensus       249 GST~VGKiL~~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KF-r~~GQtCVcaNR~yVh~~iyD~Fv~~l~e  327 (503)
T KOG2451|consen  249 GSTNVGKILMAQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKF-RNSGQTCVCANRVYVHDSIYDKFVSKLAE  327 (503)
T ss_pred             ccchHHHHHHHhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhh-ccCCceeEecceeEEehhhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CC-CCceeeceEeeCCCCCCcccccccccc
Q 009109          333 ELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DE-KQLKIAPTILLDVPDDSTIMKEEIFGP  408 (543)
Q Consensus       333 ~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgP  408 (543)
                      +++++++||..+ .++.||||++.+.++++.+++||.. ++++++||+. .+ ..+|++|||+.+++.+|-+.+||+|||
T Consensus       328 ~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGP  407 (503)
T KOG2451|consen  328 AVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGP  407 (503)
T ss_pred             HHHheeccCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccc
Confidence            999999999977 7799999999999999999999975 6799999984 44 448999999999999999999999999


Q ss_pred             eeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHH
Q 009109          409 LLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS  488 (543)
Q Consensus       409 vl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~  488 (543)
                      +.+|++|+|.+|+|+++|+++.||+.|+||+|..+..+++++|++|.|-+|.-..  .....||||+|+||+||+++.+|
T Consensus       408 la~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNegli--s~~~~pFGGVKeSG~GREgskyG  485 (503)
T KOG2451|consen  408 LASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLI--SDAEAPFGGVKESGFGREGSKYG  485 (503)
T ss_pred             cceeeeeCCHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeeccccee--cccccCcCCccccccCccccccc
Confidence            9999999999999999999999999999999999999999999999999998764  67889999999999999999999


Q ss_pred             HHHhhhceEEEEec
Q 009109          489 FDAFSHKKAVLYRS  502 (543)
Q Consensus       489 ~~~~~~~k~v~~~~  502 (543)
                      +++|+..|.+.+..
T Consensus       486 idey~~ik~icig~  499 (503)
T KOG2451|consen  486 IDEYLVIKYICIGT  499 (503)
T ss_pred             hhhhhhhheeeecC
Confidence            99999999998764

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=8.3e-102  Score=815.98  Aligned_cols=463  Identities=29%  Similarity=0.435  Sum_probs=432.5

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a   99 (543)
                      .++|||| +|+++..  +++++        ||.||+.++.+ +.++.+|+++|+++|++||+.|+++++.+|.++|++++
T Consensus         1 ~~~~i~g-~~~~~~~--~~~~~--------nP~tg~~i~~~-~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a   68 (472)
T COG1012           1 YKLLIDG-EWVDGAS--TIEVI--------NPATGEVIATV-PAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIA   68 (472)
T ss_pred             CCccCCC-eecCCCC--ceeee--------CCCCCCEEeee-cCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Confidence            3689999 9999866  66666        88899999666 88999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW  179 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~  179 (543)
                      ++|++++++|++++++|+|||+.+++. |+..+++.++|+++..+++.+.. .+..   .....+++++|+|||++|+||
T Consensus        69 ~~l~~~~~ela~~~~~e~Gk~i~ea~~-ei~~~~~~~~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~P~GVv~~I~Pw  143 (472)
T COG1012          69 DLLEARAEELAALITLETGKPISEARG-EIARAADFIRYYAEEARRLEGET-IPTD---KGSKALVRREPLGVVGAITPW  143 (472)
T ss_pred             HHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCc-cCCC---CCcceEEEeecceEEEEECCC
Confidence            999999999999999999999999986 79999999999999998765543 2111   156789999999999999999


Q ss_pred             chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChH
Q 009109          180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPR  256 (543)
Q Consensus       180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~  256 (543)
                      |||+++.+++++|||++||+||+|||+.+|+++..+++++.++ +|+|+||+|+| +.+.+++|+.|+ ||+|+||||++
T Consensus       144 NfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~  223 (472)
T COG1012         144 NFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTA  223 (472)
T ss_pred             CCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChH
Confidence            9999999999999999999999999999999999999999888 99999999999 667899999997 99999999999


Q ss_pred             HHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHh
Q 009109          257 VGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE  336 (543)
Q Consensus       257 ~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~  336 (543)
                      +|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|+|||+++||+|+++|+++ ++
T Consensus       224 ~G~~i~~~Aa~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f-~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~  301 (472)
T COG1012         224 VGRAIAAAAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAF-FNAGQRCTAASRLIVHESVYDEFVERLVAR-AA  301 (472)
T ss_pred             HHHHHHHHHhhcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHH-hCCCCCccCCeEEEEehhhHHHHHHHHHHH-Hh
Confidence            9999999999999999999999999999999999999999999999 999999999999999999999999999999 66


Q ss_pred             -hcCCC-CCCCCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeee
Q 009109          337 -FFGKN-PMESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV  413 (543)
Q Consensus       337 -l~~g~-~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~  413 (543)
                       +++|| .++.+++||++++.+++++.++|+++.+ +++++.||..+. |+|++|||+.+++++|++++||+||||++|+
T Consensus       302 ~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~  380 (472)
T COG1012         302 SLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVI  380 (472)
T ss_pred             cCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCCC-CeEECCEEEecCCCCChhhhccccCCceEEE
Confidence             78999 4558999999999999999999999976 568888887444 8999999999999999999999999999999


Q ss_pred             ccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhh
Q 009109          414 TVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS  493 (543)
Q Consensus       414 ~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~  493 (543)
                      +|+|+||||+++|+++|||+++|||+|..++.++++++++|+|+||+...+...+.+||||+|.||+|+++|.+++++|+
T Consensus       381 ~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~  460 (472)
T COG1012         381 RFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFT  460 (472)
T ss_pred             EeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999865567788999999999999999999999999


Q ss_pred             hceEEEEec
Q 009109          494 HKKAVLYRS  502 (543)
Q Consensus       494 ~~k~v~~~~  502 (543)
                      +.|++..+.
T Consensus       461 ~~k~v~~~~  469 (472)
T COG1012         461 EVKTVTIKL  469 (472)
T ss_pred             cceEEEEec
Confidence            999998764

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=100.00  E-value=6.2e-101  Score=822.10  Aligned_cols=476  Identities=22%  Similarity=0.282  Sum_probs=438.5

Q ss_pred             hhhhcccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHH
Q 009109           10 QDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYE   89 (543)
Q Consensus        10 ~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~   89 (543)
                      |.+...+-...++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||+.|+.++..
T Consensus       104 ~~~~~~~~~~~~~~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~v-~~a~~~dv~~Av~aA~~A~~~W~~~~~~  173 (604)
T PLN02419        104 QSTQPQMPPRVPNLIGG-SFVESQSSSFIDVI--------NPATQEVVSKV-PLTTNEEFKAAVSAAKQAFPLWRNTPIT  173 (604)
T ss_pred             cccCcccccccceeECC-EEecCCCCceEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhccCCHH
Confidence            34444555678899999 99988766667766        88899999766 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeec
Q 009109           90 WRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEP  169 (543)
Q Consensus        90 ~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  169 (543)
                      +|.++|++++++|++++++|++++++|+|||+.++.. |+..+++.++++++.++.+.+... .  ....+...+++++|
T Consensus       174 eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea~~-EV~~~i~~~~~~a~~a~~~~g~~~-~--~~~~~~~~~~~reP  249 (604)
T PLN02419        174 TRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSHG-DIFRGLEVVEHACGMATLQMGEYL-P--NVSNGVDTYSIREP  249 (604)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCcc-c--ccCCCccceEEecC
Confidence            9999999999999999999999999999999999984 999999999999998887654321 1  11123456889999


Q ss_pred             ceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CC
Q 009109          170 LGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WD  247 (543)
Q Consensus       170 ~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~  247 (543)
                      +|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+|+|+.+.++.|+.|+ ||
T Consensus       250 ~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~~~Vd  329 (604)
T PLN02419        250 LGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIR  329 (604)
T ss_pred             ccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCChHHHHHHHhCCCCC
Confidence            99999999999999999999999999999999999999999999999999999 99999999999767889999985 99


Q ss_pred             EEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHH
Q 009109          248 KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLI  327 (543)
Q Consensus       248 ~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~  327 (543)
                      +|+||||+++|+.|++.++++++|+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++ +|+|+
T Consensus       330 ~V~FTGSt~vG~~I~~~Aa~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f-~naGQ~C~A~~Rv~V~~~-~d~f~  407 (604)
T PLN02419        330 AVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGF-GAAGQRCMALSTVVFVGD-AKSWE  407 (604)
T ss_pred             EEEEeCChHHHHHHHHHHhccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHH-hhCCCCcCCCCEEEEeCc-HHHHH
Confidence            9999999999999999999999999999999999999999999999999999999 999999999999999999 99999


Q ss_pred             HHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCCCCcc
Q 009109          328 DSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTI  400 (543)
Q Consensus       328 ~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~  400 (543)
                      ++|+++++++++|+|.+ .+++||++++.+++++.++|+++.+ |+++++||...     ..|+|++|||+.+++++|.+
T Consensus       408 e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i  487 (604)
T PLN02419        408 DKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMEC  487 (604)
T ss_pred             HHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHH
Confidence            99999999999999976 6789999999999999999999875 67999999642     35899999999999999999


Q ss_pred             cccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCC
Q 009109          401 MKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM  480 (543)
Q Consensus       401 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~  480 (543)
                      ++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+.. +...+.+||||+|.||+
T Consensus       488 ~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~-~~~~~~~PFGG~k~SG~  566 (604)
T PLN02419        488 YKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPI-PVPLPFFSFTGNKASFA  566 (604)
T ss_pred             HcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCC-CCCCCCCCcCCcCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999874 34557899999999999


Q ss_pred             C--CcchHHHHHHhhhceEEEEec
Q 009109          481 G--SYHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       481 G--~~~g~~~~~~~~~~k~v~~~~  502 (543)
                      |  +++|.+|+++|++.|+|+++.
T Consensus       567 G~~~~~G~~gl~~ft~~K~v~~~~  590 (604)
T PLN02419        567 GDLNFYGKAGVDFFTQIKLVTQKQ  590 (604)
T ss_pred             CCCcccHHHHHHHhhCeEEEEEcc
Confidence            9  799999999999999998765

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=100.00  E-value=6.6e-101  Score=815.94  Aligned_cols=463  Identities=23%  Similarity=0.347  Sum_probs=430.3

Q ss_pred             ceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 009109           21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN  100 (543)
Q Consensus        21 ~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~  100 (543)
                      ++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||+.|++++..+|.++|+++++
T Consensus        12 ~~~i~G-~~~~~~~~~~~~v~--------nP~tg~~v~~~-~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~   81 (482)
T PRK11241         12 QALING-EWLDANNGEVIDVT--------NPANGDKLGSV-PKMGADETRAAIDAANRALPAWRALTAKERANILRRWFN   81 (482)
T ss_pred             cceECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence            589999 99987777677777        88899999776 999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCc
Q 009109          101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN  180 (543)
Q Consensus       101 ~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N  180 (543)
                      +|++++++|++++++|+|||+.+++. |+..+++.+++++...++..+... .  ....+...+++++|+|||++|+|||
T Consensus        82 ~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~-~--~~~~~~~~~~~~~P~GVv~~I~PwN  157 (482)
T PRK11241         82 LMMEHQDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTI-P--GHQADKRLIVIKQPIGVTAAITPWN  157 (482)
T ss_pred             HHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccc-c--cCCCCceEEEEEeeceEEEEECCCc
Confidence            99999999999999999999999984 999999999999988776433211 1  1112334678999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHH
Q 009109          181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRV  257 (543)
Q Consensus       181 ~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~  257 (543)
                      ||+.++++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+||+|+| +.+.++.|++|+ +|.|+||||+++
T Consensus       158 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~  237 (482)
T PRK11241        158 FPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEI  237 (482)
T ss_pred             ChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHH
Confidence            999999999999999999999999999999999999999999 99999999999 567889999997 999999999999


Q ss_pred             HHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhh
Q 009109          258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF  337 (543)
Q Consensus       258 g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l  337 (543)
                      |+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++
T Consensus       238 G~~i~~~aa~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f-~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l  316 (482)
T PRK11241        238 GRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKL  316 (482)
T ss_pred             HHHHHHHHHhcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHH-hcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhC
Confidence            999999999999999999999999999999999999999999999 9999999999999999999999999999999999


Q ss_pred             cCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC-CCceeeceEeeCCCCCCcccccccccceeeeec
Q 009109          338 FGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVT  414 (543)
Q Consensus       338 ~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~  414 (543)
                      ++|+|.+ .+++||++++.+++++.++++++.+ |+++++||..+. +|+|++|||+.+++++|++++||+||||++|++
T Consensus       317 ~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~  396 (482)
T PRK11241        317 HIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFR  396 (482)
T ss_pred             CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEE
Confidence            9999976 6789999999999999999999875 679999997543 689999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhh
Q 009109          415 VEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSH  494 (543)
Q Consensus       415 ~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~  494 (543)
                      |+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+|+++||+
T Consensus       397 ~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~ft~  474 (482)
T PRK11241        397 FKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLE  474 (482)
T ss_pred             eCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCC--CCCCCCcCCccccccCcccHHHHHHHhhc
Confidence            9999999999999999999999999999999999999999999998764  34578999999999999999999999999


Q ss_pred             ceEEEE
Q 009109          495 KKAVLY  500 (543)
Q Consensus       495 ~k~v~~  500 (543)
                      .|+|++
T Consensus       475 ~k~v~~  480 (482)
T PRK11241        475 IKYMCI  480 (482)
T ss_pred             ceEEEE
Confidence            999875

>PLN02203 aldehyde dehydrogenase

Probab=100.00  E-value=2.3e-99  Score=800.81  Aligned_cols=478  Identities=53%  Similarity=0.916  Sum_probs=446.1

Q ss_pred             CCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHH
Q 009109           64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL  143 (543)
Q Consensus        64 a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~  143 (543)
                      +..+|+++|+++|++||+.|+.+++.+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.++++++.+
T Consensus         3 ~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~~   82 (484)
T PLN02203          3 APGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSNL   82 (484)
T ss_pred             CCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67889999999999999999999999999999999999999999999999999999999997569999999999999999


Q ss_pred             hhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhc
Q 009109          144 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYV  223 (543)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~al  223 (543)
                      +++.+...........+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++.+++.+++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~l  162 (484)
T PLN02203         83 KKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKYL  162 (484)
T ss_pred             HHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhC
Confidence            98876532211111234467899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEeecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcC---CCCHHHHHHHHHHh
Q 009109          224 DNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS---TINLQVTTRRIIAG  300 (543)
Q Consensus       224 P~gvv~vv~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~---daDl~~aa~~iv~~  300 (543)
                      |+|+||+|+|+.+.+..|+.|++|.|+||||+++|+.|++.++++++|+++|+|||||+||++   |||++.|++.++++
T Consensus       163 P~gvv~vv~g~~~~~~~l~~~~vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~  242 (484)
T PLN02203        163 DSKAVKVIEGGPAVGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGG  242 (484)
T ss_pred             CcCEEEEEeCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHH
Confidence            999999999988899999999999999999999999999999999999999999999999997   69999999999999


Q ss_pred             hccc-CCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECccc
Q 009109          301 KWMA-NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQR  379 (543)
Q Consensus       301 ~~~~-~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~  379 (543)
                      +| . |+||.|++++|+|||++++|+|+++|+++++++++|||.+++++||++++.+++++.++++++..++++++||..
T Consensus       243 ~f-~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~~~~~~gg~~  321 (484)
T PLN02203        243 KW-GSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHGGSI  321 (484)
T ss_pred             hc-ccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHHHhCCeEEeCCCc
Confidence            99 7 799999999999999999999999999999999999998878999999999999999999998767889999976


Q ss_pred             CCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEEC
Q 009109          380 DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFN  459 (543)
Q Consensus       380 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN  459 (543)
                      +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||
T Consensus       322 ~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN  401 (484)
T PLN02203        322 DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFN  401 (484)
T ss_pred             CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEC
Confidence            55799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEecCCCCCCCcCCCCChHHHHHHHHHhhhhhhHHHHHHhh
Q 009109          460 DTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKLLRALFNGNIFGLLLALIG  539 (543)
Q Consensus       460 ~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  539 (543)
                      ++..+...+.+||||+|.||+|+++|.+++++||+.|+|++++.....+++||||+++|.+++|.+.++-.+++.+-++|
T Consensus       402 ~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  481 (484)
T PLN02203        402 DAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRSLLTEFEFRYPPWNDFKLGFLRLVYRFDYFGLLLLLLG  481 (484)
T ss_pred             CcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcCccCcccccCCCCChHHHHHHHHHHhhcchhhhccccc
Confidence            98765556789999999999999999999999999999998877678889999999999999999999877788877777


Q ss_pred             ccc
Q 009109          540 WSR  542 (543)
Q Consensus       540 ~~~  542 (543)
                      +.|
T Consensus       482 ~~~  484 (484)
T PLN02203        482 LKR  484 (484)
T ss_pred             cCC
Confidence            654

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-99  Score=806.82  Aligned_cols=484  Identities=24%  Similarity=0.380  Sum_probs=451.0

Q ss_pred             CCCcccchhhhhhcccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHh
Q 009109            1 MRNPSVRAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNY   80 (543)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~   80 (543)
                      ||++++++|||+.+.+.-..++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~i~g-~~~~~~~~~~~~~~--------nP~tg~~i~~v-~~~~~~dv~~av~aA~~a~   70 (494)
T PRK09847          1 MNFHHLAYWQDKALSLAIENRLFING-EYTAAAENETFETV--------DPVTQAPLAKI-ARGKSVDIDRAVSAARGVF   70 (494)
T ss_pred             CChhhhhhHhHhhhcCccccCceECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHhc
Confidence            89999999999999998889999999 99988777777777        88899999766 9999999999999999999


Q ss_pred             h--hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcC
Q 009109           81 N--SRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTT  158 (543)
Q Consensus        81 ~--~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  158 (543)
                      +  .|+.+|..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.++++++.++++.+... .   ..
T Consensus        71 ~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~-~---~~  146 (494)
T PRK09847         71 ERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVA-T---TS  146 (494)
T ss_pred             CCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-c---CC
Confidence            7  5999999999999999999999999999999999999999988656999999999999998887654321 1   11


Q ss_pred             CCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChH
Q 009109          159 YPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVA  236 (543)
Q Consensus       159 ~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~  236 (543)
                      .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+++| +.+
T Consensus       147 ~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~  226 (494)
T PRK09847        147 SHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHE  226 (494)
T ss_pred             CCceeEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChh
Confidence            2345688999999999999999999999999999999999999999999999999999999999 99999999998 677


Q ss_pred             HHHHHHhCC-CCEEEEeCChHHHHHHHHHHh-cccCcEEEecCCCCcEEEcCCC-CHHHHHHHHHHhhcccCCCCccccC
Q 009109          237 ETSALLEQK-WDKILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTI-NLQVTTRRIIAGKWMANNGQACIGV  313 (543)
Q Consensus       237 ~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~da-Dl~~aa~~iv~~~~~~~~Gq~C~a~  313 (543)
                      .+..|+.|+ +|.|+||||+++|+.|.+.++ ++++|+++|+||+||+||.+|+ |++.|++.+++++| .|+||.|+++
T Consensus       227 ~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~-~~aGQ~C~a~  305 (494)
T PRK09847        227 AGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIF-YNQGQVCIAG  305 (494)
T ss_pred             HHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHH-hcCCCCCCCC
Confidence            889999996 999999999999999999988 5899999999999999999997 99999999999999 9999999999


Q ss_pred             CEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCCceeeceEee
Q 009109          314 DYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILL  392 (543)
Q Consensus       314 ~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~~Ptvl~  392 (543)
                      +|||||+++||+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++.+.+++++||.....+.|++|||+.
T Consensus       306 ~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G~i~~gg~~~~~~~~~~Ptvl~  385 (494)
T PRK09847        306 TRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFV  385 (494)
T ss_pred             cEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCeEEECCccCCCCceEeeEEEe
Confidence            9999999999999999999999999999987 678999999999999999999998766999999775567899999999


Q ss_pred             CCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCc
Q 009109          393 DVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPF  472 (543)
Q Consensus       393 ~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pf  472 (543)
                      +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||++..  ..+.+||
T Consensus       386 ~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~Pf  463 (494)
T PRK09847        386 DVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYND--GDMTVPF  463 (494)
T ss_pred             CCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999998754  4567899


Q ss_pred             ccCCCCCCCCcchHHHHHHhhhceEEEEe
Q 009109          473 GGVGESGMGSYHGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       473 GG~~~SG~G~~~g~~~~~~~~~~k~v~~~  501 (543)
                      ||+|.||+|+++|.+++++||+.|+|++.
T Consensus       464 GG~k~SG~G~~~g~~~l~~ft~~k~v~~~  492 (494)
T PRK09847        464 GGYKQSGNGRDKSLHALEKFTELKTIWIS  492 (494)
T ss_pred             CCCcccccCccchHHHHHHhhceEEEEEe
Confidence            99999999999999999999999999764

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=100.00  E-value=1.1e-98  Score=799.24  Aligned_cols=462  Identities=49%  Similarity=0.826  Sum_probs=433.1

Q ss_pred             CCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHH
Q 009109           64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL  143 (543)
Q Consensus        64 a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~  143 (543)
                      .+.+|+++++++|++||++|+.++.++|.++|++++++|++++++|++++++|+||+..|+...|+..+++.++++++++
T Consensus         4 ~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~~   83 (493)
T PTZ00381          4 DNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHL   83 (493)
T ss_pred             CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999999999999999999999999999998779999999999999999


Q ss_pred             hhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhc
Q 009109          144 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYV  223 (543)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~al  223 (543)
                      ++|+++..........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++++++.+++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~l  163 (493)
T PTZ00381         84 DEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKYL  163 (493)
T ss_pred             HHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhC
Confidence            99987654332222233467899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEeecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcc
Q 009109          224 DNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM  303 (543)
Q Consensus       224 P~gvv~vv~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~  303 (543)
                      |+|++++++|+.+.+..|++|++|+|+||||+++|+.|+++++++++|+++|+|||||+||++|||++.|++.|++++| 
T Consensus       164 p~~~v~vv~g~~~~~~~l~~~~~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~-  242 (493)
T PTZ00381        164 DPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKF-  242 (493)
T ss_pred             CcCEEEEecCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-
Confidence            9999999999888899999989999999999999999999999999999999999999999999999999999999999 


Q ss_pred             cCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCC
Q 009109          304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ  383 (543)
Q Consensus       304 ~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g  383 (543)
                      .|+||.|+++++||||++++|+|+++|++.+++++++++.+++++||++++++++++.+++++  +++++++||..+..+
T Consensus       243 ~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~--~ga~~~~gG~~~~~~  320 (493)
T PTZ00381        243 LNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKD--HGGKVVYGGEVDIEN  320 (493)
T ss_pred             hhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHh--CCCcEEECCCcCCCC
Confidence            999999999999999999999999999999999986666668899999999999999999973  478899999876678


Q ss_pred             ceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcc
Q 009109          384 LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIV  463 (543)
Q Consensus       384 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~  463 (543)
                      .|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.+.++++++++++|.|+||++..
T Consensus       321 ~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~~~  400 (493)
T PTZ00381        321 KYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVF  400 (493)
T ss_pred             CeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             cCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEec--CCCCCCCcCCCCChHHHHHHHHHhhh
Q 009109          464 HTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS--FNGDSTTRYPPYTAEKQKLLRALFNG  528 (543)
Q Consensus       464 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~  528 (543)
                      +...+.+||||+|.||+|++||.+|+++||+.|+|..++  .+.+.+++||||+.++.++++++++-
T Consensus       401 ~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~  467 (493)
T PTZ00381        401 HLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKSTGNSFDLSLRYPPYTSFKSWVLSFLLKL  467 (493)
T ss_pred             cccCCCCCCCCcCcccccccchHHHHHhccceeEEEEccccccCcccccCCCCChHHHHHHHHHHhc
Confidence            767789999999999999999999999999999999886  34567889999999999999988863

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=100.00  E-value=4.6e-99  Score=801.47  Aligned_cols=464  Identities=23%  Similarity=0.348  Sum_probs=428.5

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a   99 (543)
                      +++|||| +|+.+ ++.+++++        ||.||++++++ +.++.+|+++|+++|++||++|++++.++|.++|++++
T Consensus         2 ~~~~i~g-~~~~~-~~~~~~v~--------~P~tg~~i~~~-~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a   70 (472)
T TIGR03374         2 HKLLING-ELVSG-EGEKQPVY--------NPATGEVILEI-AEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLA   70 (472)
T ss_pred             CCceECC-EEecC-CCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence            4789999 99976 45556665        88899999766 99999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW  179 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~  179 (543)
                      ++|++++++|++++++|+|||..++...|+..+++.+++++...+.... ....  ....+...++.++|+|||++|+||
T Consensus        71 ~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~-~~~~--~~~~~~~~~~~~~P~GVV~~I~Pw  147 (472)
T TIGR03374        71 DVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG-LAAG--EYLEGHTSMIRRDPLGVVASIAPW  147 (472)
T ss_pred             HHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cccC--ccCCCceEEEEEecceEEEEECCC
Confidence            9999999999999999999999988756999999999999887665332 1111  011234568899999999999999


Q ss_pred             chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHH
Q 009109          180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRV  257 (543)
Q Consensus       180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~  257 (543)
                      |||+.+.++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+++| +.+.++.|++|+ +|+|+||||+++
T Consensus       148 N~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~  227 (472)
T TIGR03374       148 NYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIAT  227 (472)
T ss_pred             CchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHHhCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHH
Confidence            999999999999999999999999999999999999999998899999999999 677899999996 999999999999


Q ss_pred             HHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhh
Q 009109          258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF  337 (543)
Q Consensus       258 g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l  337 (543)
                      |+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++
T Consensus       228 G~~i~~~aa~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l  306 (472)
T TIGR03374       228 GEHILSHTAPSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGF-YNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATL  306 (472)
T ss_pred             HHHHHHHHhhcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999999999 9999999999999999999999999999999999


Q ss_pred             cCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-C-CEEEECcccC-CCCceeeceEeeCCCCCCcccccccccceeeee
Q 009109          338 FGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-S-DKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV  413 (543)
Q Consensus       338 ~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~-~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~  413 (543)
                      ++|+|.+ ++++||++++.+++++.++|+++.+ + +++++||... ..|+|++|||+.+++++|++++||+||||++|+
T Consensus       307 ~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~  386 (472)
T TIGR03374       307 KSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSIT  386 (472)
T ss_pred             CCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEE
Confidence            9999976 6789999999999999999999876 4 4899999764 358999999999999999999999999999999


Q ss_pred             ccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhh
Q 009109          414 TVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS  493 (543)
Q Consensus       414 ~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~  493 (543)
                      +|+|.||||+++|+++|||++||||+|.+++.++++++++|.|+||+...  ..+.+||||+|.||+|+++|.+|+++||
T Consensus       387 ~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t  464 (472)
T TIGR03374       387 SFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYT  464 (472)
T ss_pred             EECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCccCccCccchHHHHHHhh
Confidence            99999999999999999999999999999999999999999999998764  4678999999999999999999999999


Q ss_pred             hceEEEE
Q 009109          494 HKKAVLY  500 (543)
Q Consensus       494 ~~k~v~~  500 (543)
                      +.|++++
T Consensus       465 ~~k~i~~  471 (472)
T TIGR03374       465 VVRHIMV  471 (472)
T ss_pred             ceEEEEE
Confidence            9999875

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=100.00  E-value=5.3e-99  Score=805.83  Aligned_cols=469  Identities=25%  Similarity=0.357  Sum_probs=434.5

Q ss_pred             cccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHH
Q 009109           18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQI   95 (543)
Q Consensus        18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~--~w~~~~~~~R~~iL   95 (543)
                      .+.++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||+  .|+.++.++|.++|
T Consensus        19 ~~~~~~I~G-~~~~~~~~~~~~~~--------~P~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L   88 (501)
T PLN02766         19 KFTKLFING-EFVDAASGKTFETR--------DPRTGEVIARI-AEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIM   88 (501)
T ss_pred             ccccceECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHH
Confidence            456789999 99988777777777        88899999776 99999999999999999998  59999999999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEE
Q 009109           96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLV  175 (543)
Q Consensus        96 ~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~  175 (543)
                      ++++++|++++++|++++++|+|||..+++..|+..+++.+++++...+++.+.. ...   ......+++++|+|||++
T Consensus        89 ~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVV~~  164 (501)
T PLN02766         89 MKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGET-LKM---SRQLQGYTLKEPIGVVGH  164 (501)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCce-ecc---CCCceEEEEeccceEEEE
Confidence            9999999999999999999999999999875699999999999999887764321 111   122356788999999999


Q ss_pred             EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEe
Q 009109          176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYT  252 (543)
Q Consensus       176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ft  252 (543)
                      |+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|+||+|+| +.+.+..|++|+ +|+|+||
T Consensus       165 I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FT  244 (501)
T PLN02766        165 IIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFT  244 (501)
T ss_pred             ECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEE
Confidence            99999999999999999999999999999999999999999999999 99999999999 667889999996 9999999


Q ss_pred             CChHHHHHHHHHHh-cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHH
Q 009109          253 GSPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR  331 (543)
Q Consensus       253 GS~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~  331 (543)
                      ||+++|+.|++.++ ++++|+++|||||||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|+
T Consensus       245 GS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f-~n~GQ~C~a~~ri~V~~si~d~f~~~l~  323 (501)
T PLN02766        245 GSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIF-YNKGEICVASSRVYVQEGIYDEFVKKLV  323 (501)
T ss_pred             CcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hhcCCCCCCCeEEEEcHHHHHHHHHHHH
Confidence            99999999999998 699999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccc
Q 009109          332 NELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGP  408 (543)
Q Consensus       332 ~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgP  408 (543)
                      ++++++++|+|.+ .+++||++++.+++++.++|+++.. ++++++||... ..|+|++|||+.+++++|++++||+|||
T Consensus       324 ~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGP  403 (501)
T PLN02766        324 EKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGP  403 (501)
T ss_pred             HHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCc
Confidence            9999999999987 6789999999999999999999865 56999999763 4689999999999999999999999999


Q ss_pred             eeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHH
Q 009109          409 LLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS  488 (543)
Q Consensus       409 vl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~  488 (543)
                      |++|++|+|++|||+++|+++|||++||||+|.+++.++++++++|+|+||+..  ...+.+||||+|.||+|+++|.++
T Consensus       404 Vl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~--~~~~~~PfGG~k~SG~G~~~G~~~  481 (501)
T PLN02766        404 VMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYF--AFDPDCPFGGYKMSGFGRDQGMDA  481 (501)
T ss_pred             eEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCC--CCCCCCCcCCcccCcCCccchHHH
Confidence            999999999999999999999999999999999999999999999999999865  356789999999999999999999


Q ss_pred             HHHhhhceEEEEecC
Q 009109          489 FDAFSHKKAVLYRSF  503 (543)
Q Consensus       489 ~~~~~~~k~v~~~~~  503 (543)
                      +++||+.|+|++...
T Consensus       482 l~~ft~~k~v~~~~~  496 (501)
T PLN02766        482 LDKYLQVKSVVTPLY  496 (501)
T ss_pred             HHHHhceEEEEEecc
Confidence            999999999988653

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=100.00  E-value=3.9e-98  Score=796.33  Aligned_cols=468  Identities=22%  Similarity=0.343  Sum_probs=430.5

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQS   97 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~--~w~~~~~~~R~~iL~~   97 (543)
                      .++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||+  .|+++|..+|.++|++
T Consensus         6 ~~~~I~g-~~~~~~~~~~~~~~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~   75 (486)
T cd07140           6 HQLFING-EFVDAEGGKTYNTI--------NPTDGSVICKV-SLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYR   75 (486)
T ss_pred             cCceECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHH
Confidence            5799999 99988777777777        88899999655 99999999999999999998  5999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccC-cCCCCcceEEeecceEEEEE
Q 009109           98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSL-TTYPSSAEIISEPLGVVLVI  176 (543)
Q Consensus        98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i  176 (543)
                      ++++|++++++|++++++|+|||..++...|+..+++.+++++...+++.... ..... .......+++++|+|||++|
T Consensus        76 ~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~r~P~GVv~~I  154 (486)
T cd07140          76 LADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKT-IPINQARPNRNLTLTKREPIGVCGIV  154 (486)
T ss_pred             HHHHHHHhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEeeccceEEEE
Confidence            99999999999999999999999999975699999999999998877653321 11110 01112367899999999999


Q ss_pred             cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109          177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      +|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+|+| +.+.++.|+.|+ ||.|+|||
T Consensus       155 ~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftG  234 (486)
T cd07140         155 IPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTG  234 (486)
T ss_pred             cCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEEC
Confidence            9999999999999999999999999999999999999999999999 99999999998 567889999996 99999999


Q ss_pred             ChHHHHHHHHHHhc-ccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109          254 SPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN  332 (543)
Q Consensus       254 S~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~  332 (543)
                      |+++|+.|++.++. +++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++
T Consensus       235 s~~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~-~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~  313 (486)
T cd07140         235 STPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVF-FNKGENCIAAGRLFVEESIHDEFVRRVVE  313 (486)
T ss_pred             cHHHHHHHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHH-hccCCCCCCCcEEEEcHHHHHHHHHHHHH
Confidence            99999999999996 99999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccce
Q 009109          333 ELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPL  409 (543)
Q Consensus       333 ~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv  409 (543)
                      +++++++|+|.+ ++++||++++.+++++.++|+++.+ ++++++||.. +..|+|++|||+.+++++|++++||+||||
T Consensus       314 ~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPv  393 (486)
T cd07140         314 EVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPI  393 (486)
T ss_pred             HHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCe
Confidence            999999999987 7799999999999999999999875 6799999975 446899999999999999999999999999


Q ss_pred             eeeeccC--CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHH
Q 009109          410 LPIVTVE--KIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF  487 (543)
Q Consensus       410 l~v~~~~--~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~  487 (543)
                      ++|++|+  |++|||+++|+++|||++||||+|.++++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+
T Consensus       394 l~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~  471 (486)
T cd07140         394 MIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNK--TDVAAPFGGFKQSGFGKDLGEE  471 (486)
T ss_pred             EEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCcCCCcchHH
Confidence            9999998  69999999999999999999999999999999999999999998653  5567999999999999999999


Q ss_pred             HHHHhhhceEEEEe
Q 009109          488 SFDAFSHKKAVLYR  501 (543)
Q Consensus       488 ~~~~~~~~k~v~~~  501 (543)
                      ++++||+.|+|++.
T Consensus       472 ~l~~ft~~k~v~~~  485 (486)
T cd07140         472 ALNEYLKTKTVTIE  485 (486)
T ss_pred             HHHHhhcEEEEEEe
Confidence            99999999999763

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=100.00  E-value=8e-98  Score=793.31  Aligned_cols=463  Identities=25%  Similarity=0.390  Sum_probs=430.2

Q ss_pred             ceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 009109           21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN  100 (543)
Q Consensus        21 ~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~  100 (543)
                      ++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|+++|.++|.++|+++++
T Consensus         2 ~~~i~g-~~~~~~~~~~~~~~--------nP~t~~~i~~~-~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~   71 (475)
T cd07117           2 GLFING-EWVKGSSGETIDSY--------NPANGETLSEI-TDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIAD   71 (475)
T ss_pred             CceECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence            579999 99988777777777        88899999765 999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCc
Q 009109          101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN  180 (543)
Q Consensus       101 ~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N  180 (543)
                      +|++++++|++++++|+|||+.+++..|+..+++.+++++..+....... .   ....+...+++++|+|||++|+|||
T Consensus        72 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~-~---~~~~~~~~~~~~~P~GVV~~I~PwN  147 (475)
T cd07117          72 IIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSA-N---MIDEDTLSIVLREPIGVVGQIIPWN  147 (475)
T ss_pred             HHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-c---ccCCCceeEEEEeecceEEEECCCc
Confidence            99999999999999999999999976699999999999988776532211 1   1112345688999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHH
Q 009109          181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVG  258 (543)
Q Consensus       181 ~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g  258 (543)
                      ||+.++++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+|+| +.+.+..|+.|+ +|.|+||||+++|
T Consensus       148 ~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g  227 (475)
T cd07117         148 FPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDVLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVG  227 (475)
T ss_pred             cHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHH
Confidence            99999999999999999999999999999999999999998999999999998 567889999996 9999999999999


Q ss_pred             HHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhc
Q 009109          259 RIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF  338 (543)
Q Consensus       259 ~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~  338 (543)
                      +.|++.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||++++|+|+++|++++++++
T Consensus       228 ~~i~~~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~  306 (475)
T cd07117         228 RDVAIAAAKKLIPATLELGGKSANIIFDDANWDKALEGAQLGIL-FNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVK  306 (475)
T ss_pred             HHHHHHHhccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHh-hccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999 99999999999999999999999999999999999


Q ss_pred             CCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCCCCcccccccccceee
Q 009109          339 GKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLP  411 (543)
Q Consensus       339 ~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~  411 (543)
                      +|+|.+ ++++||++++.+++++.++++++.+ ++++++||...     ..|+|++|||+.+++++|++++||+||||++
T Consensus       307 ~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~  386 (475)
T cd07117         307 VGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVAT  386 (475)
T ss_pred             CCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEE
Confidence            999977 6789999999999999999999865 67999999753     2589999999999999999999999999999


Q ss_pred             eeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHH
Q 009109          412 IVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDA  491 (543)
Q Consensus       412 v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~  491 (543)
                      |++|+|.+|||+++|+++|||++||||+|.+++.++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++
T Consensus       387 v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~  464 (475)
T cd07117         387 VIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQ--IPAGAPFGGYKKSGIGRETHKSMLDA  464 (475)
T ss_pred             EEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCccCcCCCCchHHHHHH
Confidence            9999999999999999999999999999999999999999999999998653  56789999999999999999999999


Q ss_pred             hhhceEEEE
Q 009109          492 FSHKKAVLY  500 (543)
Q Consensus       492 ~~~~k~v~~  500 (543)
                      ||+.|++++
T Consensus       465 ft~~k~v~~  473 (475)
T cd07117         465 YTQMKNIYI  473 (475)
T ss_pred             HhCeEEEEE
Confidence            999999875

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>PLN02278 succinic semialdehyde dehydrogenase

Probab=100.00  E-value=1.4e-97  Score=795.19  Aligned_cols=470  Identities=25%  Similarity=0.379  Sum_probs=434.2

Q ss_pred             ccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHH
Q 009109           15 GAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQ   94 (543)
Q Consensus        15 ~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~i   94 (543)
                      |+.+ .++|||| +|+.+.++.+++++        ||.||++++++ +.++.+|+++|+++|++||+.|+++|..+|.++
T Consensus        21 ~~~~-~~~~i~g-~~~~~~~~~~~~v~--------~P~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~   89 (498)
T PLN02278         21 GLLR-TQGLIGG-KWTDAYDGKTFPVY--------NPATGEVIANV-PCMGRAETNDAIASAHDAFPSWSKLTASERSKI   89 (498)
T ss_pred             CCCc-ccceECC-EEecCCCCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence            4444 7899999 99987667667766        88899999765 999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEE
Q 009109           95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVL  174 (543)
Q Consensus        95 L~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~  174 (543)
                      |++++++|++++++|++++++|+|||..++.. |+..+++.+++++...+++.+.. .+  ....+...+++++|+|||+
T Consensus        90 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~i~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~P~GvV~  165 (498)
T PLN02278         90 LRRWYDLIIANKEDLAQLMTLEQGKPLKEAIG-EVAYGASFLEYFAEEAKRVYGDI-IP--SPFPDRRLLVLKQPVGVVG  165 (498)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcc-cc--cCCCCceEEEEeecccEEE
Confidence            99999999999999999999999999999985 99999999999999888764321 11  1112345678899999999


Q ss_pred             EEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEE
Q 009109          175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILY  251 (543)
Q Consensus       175 ~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~f  251 (543)
                      +|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+|
T Consensus       166 ~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~f  245 (498)
T PLN02278        166 AITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITF  245 (498)
T ss_pred             EECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEE
Confidence            999999999999999999999999999999999999999999999998 99999999998 456789999996 999999


Q ss_pred             eCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHH
Q 009109          252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR  331 (543)
Q Consensus       252 tGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~  331 (543)
                      |||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++| +|+||.|++++|||||+++|++|+++|+
T Consensus       246 TGS~~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~L~  324 (498)
T PLN02278        246 TGSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKF-RNSGQTCVCANRILVQEGIYDKFAEAFS  324 (498)
T ss_pred             ECcHHHHHHHHHHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHh-ccCCCCCcCCcEEEEeHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccc
Q 009109          332 NELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGP  408 (543)
Q Consensus       332 ~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgP  408 (543)
                      ++++++++|+|.+ ++++||++++.+++++.++|+++.+ ++++++||... .+|+|++|||+.+++++|++++||+|||
T Consensus       325 ~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGP  404 (498)
T PLN02278        325 KAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGP  404 (498)
T ss_pred             HHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCC
Confidence            9999999999976 6789999999999999999999865 67999999764 3689999999999999999999999999


Q ss_pred             eeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHH
Q 009109          409 LLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS  488 (543)
Q Consensus       409 vl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~  488 (543)
                      |++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+...  ..+.+||||+|.||+|+++|.+|
T Consensus       405 Vl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~  482 (498)
T PLN02278        405 VAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLI--STEVAPFGGVKQSGLGREGSKYG  482 (498)
T ss_pred             EEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCC--CCCCCCcCCcccCcCCccchHHH
Confidence            9999999999999999999999999999999999999999999999999998764  34678999999999999999999


Q ss_pred             HHHhhhceEEEEec
Q 009109          489 FDAFSHKKAVLYRS  502 (543)
Q Consensus       489 ~~~~~~~k~v~~~~  502 (543)
                      +++||+.|+|.++.
T Consensus       483 l~~ft~~k~i~~~~  496 (498)
T PLN02278        483 IDEYLEIKYVCLGN  496 (498)
T ss_pred             HHHhheeEEEEEec
Confidence            99999999998753

>PLN02467 betaine aldehyde dehydrogenase

Probab=100.00  E-value=2.6e-97  Score=792.37  Aligned_cols=470  Identities=27%  Similarity=0.394  Sum_probs=434.7

Q ss_pred             cccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHh-----hhhcCCCHHHHH
Q 009109           18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNY-----NSRKTKSYEWRM   92 (543)
Q Consensus        18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~-----~~w~~~~~~~R~   92 (543)
                      -.+++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||     +.|++++..+|.
T Consensus         6 ~~~~~~I~g-~~~~~~~~~~~~v~--------~P~t~~~i~~~-~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~   75 (503)
T PLN02467          6 PRRQLFIGG-EWREPVLGKRIPVV--------NPATEETIGDI-PAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRA   75 (503)
T ss_pred             CccCceECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHH
Confidence            347899999 99998777777777        88899999765 9999999999999999999     899999999999


Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceE
Q 009109           93 SQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGV  172 (543)
Q Consensus        93 ~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  172 (543)
                      ++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..++++.+...........+...+++++|+||
T Consensus        76 ~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  154 (503)
T PLN02467         76 KYLRAIAAKITERKSELAKLETLDCGKPLDEAAW-DMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGV  154 (503)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCce
Confidence            9999999999999999999999999999999985 999999999999998887644321111111112356889999999


Q ss_pred             EEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEE
Q 009109          173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKI  249 (543)
Q Consensus       173 v~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v  249 (543)
                      |++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+|+| +.+.++.|+.|+ +|.|
T Consensus       155 v~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v  234 (503)
T PLN02467        155 VGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKI  234 (503)
T ss_pred             EEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEE
Confidence            99999999999999999999999999999999999999999999999999 99999999999 667899999997 9999


Q ss_pred             EEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHH
Q 009109          250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDS  329 (543)
Q Consensus       250 ~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~  329 (543)
                      +||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++
T Consensus       235 ~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~  313 (503)
T PLN02467        235 AFTGSTATGRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCF-WTNGQICSATSRLLVHERIASEFLEK  313 (503)
T ss_pred             EEECCHHHHHHHHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHH-hhcCCCCCCCcEEEEcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999 99999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC---CCCceeeceEeeCCCCCCcccccc
Q 009109          330 LRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD---EKQLKIAPTILLDVPDDSTIMKEE  404 (543)
Q Consensus       330 l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~---~~g~~~~Ptvl~~~~~~~~~~~~E  404 (543)
                      |+++++++++|||.+ ++++||++++.+++++.++++++.. ++++++||...   ..|+|++|||+.+++++|++++||
T Consensus       314 l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE  393 (503)
T PLN02467        314 LVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREE  393 (503)
T ss_pred             HHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCC
Confidence            999999999999987 6789999999999999999999865 67999999753   258999999999999999999999


Q ss_pred             cccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcc
Q 009109          405 IFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYH  484 (543)
Q Consensus       405 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~  484 (543)
                      +||||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++
T Consensus       394 ~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~  471 (503)
T PLN02467        394 VFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQP--CFCQAPWGGIKRSGFGREL  471 (503)
T ss_pred             CCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCcCCCcc
Confidence            99999999999999999999999999999999999999999999999999999998653  4568999999999999999


Q ss_pred             hHHHHHHhhhceEEEEe
Q 009109          485 GKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       485 g~~~~~~~~~~k~v~~~  501 (543)
                      |.+++++||+.|++...
T Consensus       472 G~~~l~~ft~~k~i~~~  488 (503)
T PLN02467        472 GEWGLENYLSVKQVTKY  488 (503)
T ss_pred             hHHHHHHhhCeEEEEEe
Confidence            99999999999999885

>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=1.4e-98  Score=727.72  Aligned_cols=470  Identities=54%  Similarity=0.934  Sum_probs=450.9

Q ss_pred             HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcC
Q 009109           69 AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTK  148 (543)
Q Consensus        69 v~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~  148 (543)
                      ++..++.+|.+|.+.+..+.+.|.+.|+++..++++|.++|.+++..|.+|+..++...|+....+.++++.+++.+|.+
T Consensus         4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~   83 (477)
T KOG2456|consen    4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK   83 (477)
T ss_pred             HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence            45568999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCce
Q 009109          149 PEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAV  228 (543)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv  228 (543)
                      ++.............+++.+|+|||++|+|||||+.+.+.++++||+|||+||+|||+.+|.++.+|++++-++|+.+.+
T Consensus        84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Yld~~~~  163 (477)
T KOG2456|consen   84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQYLDQDLI  163 (477)
T ss_pred             ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHhcCcceE
Confidence            98877666566778999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCC
Q 009109          229 RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQ  308 (543)
Q Consensus       229 ~vv~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq  308 (543)
                      .+|.|+.+.+.+|++|++|.|+||||+.+|+.|+.+|+++++||+||||||||++|++|+|++-++++|+||++ +|+||
T Consensus       164 ~VV~Ggv~ETt~LL~~rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~-~N~GQ  242 (477)
T KOG2456|consen  164 RVVNGGVPETTELLKQRFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW-MNSGQ  242 (477)
T ss_pred             EEecCCCchHHHHHHhhccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh-ccCCC
Confidence            99999988888999999999999999999999999999999999999999999999999999999999999999 99999


Q ss_pred             ccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCCceeec
Q 009109          309 ACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAP  388 (543)
Q Consensus       309 ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~~P  388 (543)
                      .|.|+++|+++.+++++++++++..++++.+.|+.++.|++.+|+..+++|+.+++++.   ++|++||+.+....|++|
T Consensus       243 tCvapDYiL~~k~~~~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~---~kv~~Gg~~d~~d~~I~P  319 (477)
T KOG2456|consen  243 TCVAPDYILCSKSIQPKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDET---GKVAIGGESDESDRYIAP  319 (477)
T ss_pred             eeccCCeEEecHhhhHHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCC---CceecCCccchhhcccCC
Confidence            99999999999999999999999999999999999999999999999999999999743   899999999888889999


Q ss_pred             eEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCC
Q 009109          389 TILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVS  468 (543)
Q Consensus       389 tvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~  468 (543)
                      ||+.|+++++++|+||+|||||+|+.+.+++|+|+++|+.+.+|++|+||+|.+..+|+.+++++|.|.+|+..+|....
T Consensus       320 TIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~~~~  399 (477)
T KOG2456|consen  320 TILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHVTLD  399 (477)
T ss_pred             eEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEEEEee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccCCCCCCCCcchHHHHHHhhhceEEEEecCCCCC--CCcCCCCChHHHHHHHHHhhhhhhHHHHHHhhccc
Q 009109          469 SLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDS--TTRYPPYTAEKQKLLRALFNGNIFGLLLALIGWSR  542 (543)
Q Consensus       469 ~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  542 (543)
                      .+||||+|.||+|+|||++|++.|||.|++..+++..+.  ..|||||+..|..++|.++....+..++..+++..
T Consensus       400 ~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~rs~~~d~~~~~RYPP~S~~K~~~lr~~~~~~~~~~i~~~~~~~~  475 (477)
T KOG2456|consen  400 SLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLRSLGGDKLLALRYPPYSPQKLTLLRFLLESRLFQAILLSAGLLL  475 (477)
T ss_pred             ccCcCCcCccccccccccccccccccchhhhhcccccchhhhhcCCCCChHHHHHHHHHHHhHHHHHHHHhheeEe
Confidence            999999999999999999999999999999988877665  88999999999999999999988888887777653

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=100.00  E-value=1.6e-97  Score=793.52  Aligned_cols=468  Identities=24%  Similarity=0.346  Sum_probs=429.0

Q ss_pred             ceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhh-hcCCCHHHHHHHHHHHH
Q 009109           21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS-RKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        21 ~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~-w~~~~~~~R~~iL~~~a   99 (543)
                      .+|||| +|..+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||+. |++++..+|.++|++++
T Consensus         1 ~~~i~g-~~~~~~~~~~~~~~--------~P~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a   70 (477)
T cd07113           1 GHFIDG-RPVAGQSEKRLDIT--------NPATEQVIASV-ASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLA   70 (477)
T ss_pred             CCeECC-EEecCCCCCeEeee--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHH
Confidence            369999 99988666666666        88899999776 999999999999999999985 99999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCc--CCCCcceEEeecceEEEEEc
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLT--TYPSSAEIISEPLGVVLVIS  177 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~  177 (543)
                      ++|++++++|++++++|+|||..+++..|+..+++.++++++....+...........  ..+...+++++|+|||++|+
T Consensus        71 ~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~  150 (477)
T cd07113          71 DLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIV  150 (477)
T ss_pred             HHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEc
Confidence            9999999999999999999999998755999999999999887766433211110000  11235678999999999999


Q ss_pred             CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCCh
Q 009109          178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSP  255 (543)
Q Consensus       178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~  255 (543)
                      |||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|+||+|+|+.+.+..|++|+ +|+|+||||+
T Consensus       151 p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~  230 (477)
T cd07113         151 PWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSV  230 (477)
T ss_pred             CCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcH
Confidence            999999999999999999999999999999999999999999998 99999999999545889999997 9999999999


Q ss_pred             HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109          256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK  335 (543)
Q Consensus       256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~  335 (543)
                      ++|+.|++.++++++|+++|+||+||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++
T Consensus       231 ~~G~~i~~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~  309 (477)
T cd07113         231 ATGKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGF-LHQGQVCAAPERFYVHRSKFDELVTKLKQALS  309 (477)
T ss_pred             HHHHHHHHHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHH-hhCCCCCcCCcEEEECHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999 99999999999999999999999999999999


Q ss_pred             hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccceeee
Q 009109          336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI  412 (543)
Q Consensus       336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v  412 (543)
                      ++++|+|.+ ++++||++++.+++++.++++++.+ |+++++||... ..|+|++|||+.+++++|++++||+||||++|
T Consensus       310 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v  389 (477)
T cd07113         310 SFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSF  389 (477)
T ss_pred             hCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEE
Confidence            999999987 6789999999999999999999864 67999999754 35899999999999999999999999999999


Q ss_pred             eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHh
Q 009109          413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF  492 (543)
Q Consensus       413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~  492 (543)
                      ++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++|
T Consensus       390 ~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~  467 (477)
T cd07113         390 VPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTF--LDPAVPFGGMKQSGIGREFGSAFIDDY  467 (477)
T ss_pred             EEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCccccCCccchHHHHHHh
Confidence            999999999999999999999999999999999999999999999997653  457899999999999999999999999


Q ss_pred             hhceEEEEe
Q 009109          493 SHKKAVLYR  501 (543)
Q Consensus       493 ~~~k~v~~~  501 (543)
                      |+.|+|+++
T Consensus       468 t~~k~v~~~  476 (477)
T cd07113         468 TELKSVMIR  476 (477)
T ss_pred             hceEEEEEe
Confidence            999999763

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=100.00  E-value=2.1e-97  Score=796.44  Aligned_cols=467  Identities=24%  Similarity=0.351  Sum_probs=431.3

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS--RKTKSYEWRMSQIQ   96 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~--w~~~~~~~R~~iL~   96 (543)
                      ..++|||| +|+.+.++++++++        ||.||++++.+ +.++.+|+++|+++|++||+.  |+.++..+|.++|+
T Consensus        57 ~~~~~I~G-~~~~~~~~~~~~v~--------~P~tg~~i~~v-~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~  126 (538)
T PLN02466         57 YTQLLING-QFVDAASGKTFPTL--------DPRTGEVIAHV-AEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILL  126 (538)
T ss_pred             cccceECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHH
Confidence            35789999 99998788888887        88899999776 999999999999999999984  99999999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109           97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI  176 (543)
Q Consensus        97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i  176 (543)
                      +++++|++++++|++++++|+|||..++...|+..+++.+++++.+.++..+.. ..   ...+...++.++|+|||++|
T Consensus       127 ~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~-~~---~~~~~~~~~~~~P~GVV~~I  202 (538)
T PLN02466        127 RFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLT-VP---ADGPHHVQTLHEPIGVAGQI  202 (538)
T ss_pred             HHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-cc---cCCCceEEEEEecceEEEEE
Confidence            999999999999999999999999999875699999999999988776643221 11   11223468899999999999


Q ss_pred             cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109          177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      +|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|+||+|+| +.+.+..|+.|+ +|.|+|||
T Consensus       203 ~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTG  282 (538)
T PLN02466        203 IPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTG  282 (538)
T ss_pred             CCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEEC
Confidence            9999999999999999999999999999999999999999999999 99999999999 567788999986 99999999


Q ss_pred             ChHHHHHHHHHHhc-ccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109          254 SPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN  332 (543)
Q Consensus       254 S~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~  332 (543)
                      |+++|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|++
T Consensus       283 S~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~  361 (538)
T PLN02466        283 STDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALF-FNQGQCCCAGSRTFVHERVYDEFVEKAKA  361 (538)
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHH-hhcCCCcCcCcEEEEcHHHHHHHHHHHHH
Confidence            99999999999984 89999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccce
Q 009109          333 ELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPL  409 (543)
Q Consensus       333 ~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv  409 (543)
                      ++.++++|+|.+ ++++||++++.++++++++++++.+ |+++++||... ..|+|++|||+.+++++|++++||+||||
T Consensus       362 ~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPV  441 (538)
T PLN02466        362 RALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPV  441 (538)
T ss_pred             HHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcE
Confidence            999999999976 6799999999999999999999865 67999999763 36889999999999999999999999999


Q ss_pred             eeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHH
Q 009109          410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF  489 (543)
Q Consensus       410 l~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~  489 (543)
                      ++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+
T Consensus       442 l~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl  519 (538)
T PLN02466        442 QSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDV--FDAAIPFGGYKMSGIGREKGIYSL  519 (538)
T ss_pred             EEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCC--CCCCCCcCCCCcCccCcccHHHHH
Confidence            999999999999999999999999999999999999999999999999997643  567899999999999999999999


Q ss_pred             HHhhhceEEEEec
Q 009109          490 DAFSHKKAVLYRS  502 (543)
Q Consensus       490 ~~~~~~k~v~~~~  502 (543)
                      ++|++.|+|++..
T Consensus       520 ~~ft~~k~v~~~~  532 (538)
T PLN02466        520 NNYLQVKAVVTPL  532 (538)
T ss_pred             HHhcceEEEEEeC
Confidence            9999999997754

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=100.00  E-value=2.4e-97  Score=791.33  Aligned_cols=464  Identities=25%  Similarity=0.357  Sum_probs=431.3

Q ss_pred             ceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 009109           21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN  100 (543)
Q Consensus        21 ~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~  100 (543)
                      ++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|++++.++|.++|+++++
T Consensus         2 ~~~I~g-~~~~~~~~~~~~v~--------~P~t~~~~~~~-~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~   71 (480)
T cd07559           2 DNFING-EWVAPSKGEYFDNY--------NPVNGKVLCEI-PRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIAD   71 (480)
T ss_pred             CccCCC-EEecCCCCCeEEee--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence            579999 99988777777777        88899988665 999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCc
Q 009109          101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN  180 (543)
Q Consensus       101 ~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N  180 (543)
                      +|++++++|++++++|+||++.++...|+..+++.++++++.++......    .....+...+++++|+|||++|+|||
T Consensus        72 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~~~~~P~GVV~~I~PwN  147 (480)
T cd07559          72 RIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSL----SEIDEDTLSYHFHEPLGVVGQIIPWN  147 (480)
T ss_pred             HHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc----ccCCCCceeEEEEeccceEEEECCCc
Confidence            99999999999999999999999976799999999999998876543211    11112345788999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHH
Q 009109          181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVG  258 (543)
Q Consensus       181 ~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g  258 (543)
                      ||+.+.++++++||++||+||+|||+.+|.++..+++++.+++|+|+||+|+| +.+.++.|++|+ +|.|+||||+++|
T Consensus       148 ~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g  227 (480)
T cd07559         148 FPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVG  227 (480)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHHhCCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHH
Confidence            99999999999999999999999999999999999999999999999999999 567899999996 9999999999999


Q ss_pred             HHHHHHHhcccCcEEEecCCCCcEEEcCCC-----CHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHH
Q 009109          259 RIVMAAAAKHLTPVILELGGKSPAVVDSTI-----NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE  333 (543)
Q Consensus       259 ~~i~~~a~~~~~~~~lelgG~~p~iV~~da-----Dl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~  333 (543)
                      +.|++.++++++|+++|+|||||+||++||     |++.|++.+++++| +|+||.|++++|||||++++|+|+++|+++
T Consensus       228 ~~i~~~aa~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~  306 (480)
T cd07559         228 RLIMQYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFA-FNQGEVCTCPSRALVQESIYDEFIERAVER  306 (480)
T ss_pred             HHHHHHHhccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHH-hhCCCCCCCCeEEEEcHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999     99999999999999 999999999999999999999999999999


Q ss_pred             HHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCCCCcccccccc
Q 009109          334 LKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIF  406 (543)
Q Consensus       334 ~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~f  406 (543)
                      ++++++|+|.+ ++++||++++.+++++.++++++.+ ++++++||...     ..|+|++|||+.+++++|++++||+|
T Consensus       307 ~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~F  386 (480)
T cd07559         307 FEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIF  386 (480)
T ss_pred             HHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCc
Confidence            99999999987 6789999999999999999999875 67999999763     35899999999999999999999999


Q ss_pred             cceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchH
Q 009109          407 GPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGK  486 (543)
Q Consensus       407 gPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~  486 (543)
                      |||++|++|+|++|||+++|+++|||++||||+|.+++.++++++++|+|+||++..  ..+.+||||+|.||+|+++|.
T Consensus       387 gPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~  464 (480)
T cd07559         387 GPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQ--YPAHAPFGGYKKSGIGRETHK  464 (480)
T ss_pred             CceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCCccCcCCccChH
Confidence            999999999999999999999999999999999999999999999999999997643  557899999999999999999


Q ss_pred             HHHHHhhhceEEEEe
Q 009109          487 FSFDAFSHKKAVLYR  501 (543)
Q Consensus       487 ~~~~~~~~~k~v~~~  501 (543)
                      +++++||+.|+++++
T Consensus       465 ~~~~~~~~~k~v~~~  479 (480)
T cd07559         465 MMLDHYQQTKNILVS  479 (480)
T ss_pred             HHHHHhhceEEEEEe
Confidence            999999999998763

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-97  Score=792.68  Aligned_cols=467  Identities=24%  Similarity=0.354  Sum_probs=432.5

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI   98 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~   98 (543)
                      ..++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++|++.|+.++..+|.++|+++
T Consensus         6 ~~~~~I~G-~~~~~~~~~~~~~~--------nP~tg~~i~~~-~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~   75 (488)
T PRK13252          6 LQSLYIDG-AYVEATSGETFEVI--------NPATGEVLATV-QAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRA   75 (488)
T ss_pred             cccccCCC-EEecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence            37889999 99988777777777        88899999766 9999999999999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST  178 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p  178 (543)
                      +++|++++++|++++++|+|||..+++..|+..+++.++++++..+...+.. ..  . ..+...+++++|+|||++|+|
T Consensus        76 a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~-~~--~-~~~~~~~~~~~PlGVv~~I~p  151 (488)
T PRK13252         76 VDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQ-IP--L-RGGSFVYTRREPLGVCAGIGA  151 (488)
T ss_pred             HHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCce-ec--c-CCCceEEEEEeeeeEEEEECC
Confidence            9999999999999999999999999976699999999999998776532211 11  1 123456889999999999999


Q ss_pred             CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChH
Q 009109          179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPR  256 (543)
Q Consensus       179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~  256 (543)
                      ||||+.+.++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+|+|+.+.++.|+.|+ +|+|+||||++
T Consensus       152 ~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~  231 (488)
T PRK13252        152 WNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVP  231 (488)
T ss_pred             CchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHH
Confidence            99999999999999999999999999999999999999999999 99999999999556889999997 99999999999


Q ss_pred             HHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHh
Q 009109          257 VGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE  336 (543)
Q Consensus       257 ~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~  336 (543)
                      +|+.|.+.++.+++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++
T Consensus       232 ~g~~i~~~aa~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~  310 (488)
T PRK13252        232 TGKKVMAAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANF-YSSGQVCTNGTRVFVQKSIKAAFEARLLERVER  310 (488)
T ss_pred             HHHHHHHHHhhcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHH-hhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999 999999999999999999999999999999999


Q ss_pred             hcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCCCCcccccccccce
Q 009109          337 FFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPL  409 (543)
Q Consensus       337 l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv  409 (543)
                      +++|||.+ .+++||++++.++++++++++++.+ ++++++||...     ..|+|++|||+.+++++|++++||+||||
T Consensus       311 ~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPv  390 (488)
T PRK13252        311 IRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPV  390 (488)
T ss_pred             cCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCce
Confidence            99999977 6799999999999999999998865 67999999642     25899999999999999999999999999


Q ss_pred             eeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHH
Q 009109          410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF  489 (543)
Q Consensus       410 l~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~  489 (543)
                      ++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+
T Consensus       391 l~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~  468 (488)
T PRK13252        391 MSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGE--SPAEMPVGGYKQSGIGRENGIATL  468 (488)
T ss_pred             EEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCC--CCCCCCCCCCccCcCCcCChHHHH
Confidence            999999999999999999999999999999999999999999999999998643  457899999999999999999999


Q ss_pred             HHhhhceEEEEec
Q 009109          490 DAFSHKKAVLYRS  502 (543)
Q Consensus       490 ~~~~~~k~v~~~~  502 (543)
                      ++||+.|+|++..
T Consensus       469 ~~ft~~k~i~~~~  481 (488)
T PRK13252        469 EHYTQIKSVQVEM  481 (488)
T ss_pred             HHhcceEEEEEeC
Confidence            9999999998753

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=100.00  E-value=6.7e-97  Score=789.50  Aligned_cols=466  Identities=23%  Similarity=0.357  Sum_probs=427.9

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhh-hcCCCHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS-RKTKSYEWRMSQIQSI   98 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~-w~~~~~~~R~~iL~~~   98 (543)
                      .++|||| +|+.  ++.+++++        ||.||++++.+ +.++.+|+++++++|++||+. |+++|..+|.++|+++
T Consensus         1 ~~~~i~g-~~~~--~~~~~~~~--------~P~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~   68 (481)
T TIGR03216         1 IRNFING-AFVE--SGKTFANI--------NPVDGRVIARV-HEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAV   68 (481)
T ss_pred             CCceECC-EEec--CCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHH
Confidence            3689999 9996  45667777        88899999776 999999999999999999997 9999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCccccc-CcCCCCcceEEeecceEEEEEc
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTS-LTTYPSSAEIISEPLGVVLVIS  177 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~  177 (543)
                      +++|+++.++|++++++|+|||..++...|+..+++.++++++.++...... .... ....+...+++++|+|||++|+
T Consensus        69 a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~I~  147 (481)
T TIGR03216        69 ADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTEC-FEMATPDGKGALNYAVRKPLGVVGVIS  147 (481)
T ss_pred             HHHHHHhHHHHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCcc-ccccCCCCCCceeEEEEeccceEEEEC
Confidence            9999999999999999999999999875699999999999998886643221 1111 1111234678899999999999


Q ss_pred             CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-Ch-HHHHHHHhCC-CCEEEEeC
Q 009109          178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AV-AETSALLEQK-WDKILYTG  253 (543)
Q Consensus       178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~-~~~~~L~~~~-v~~v~ftG  253 (543)
                      |||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|+||+++| +. +.+..|+.|+ +|.|+|||
T Consensus       148 p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTG  227 (481)
T TIGR03216       148 PWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTG  227 (481)
T ss_pred             CCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEEC
Confidence            999999999999999999999999999999999999999999999 99999999998 44 4778888886 99999999


Q ss_pred             ChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHH
Q 009109          254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE  333 (543)
Q Consensus       254 S~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~  333 (543)
                      |+++|+.|++.++++++|+++|+||+||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++
T Consensus       228 S~~~G~~i~~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~  306 (481)
T TIGR03216       228 ETRTGSAIMKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAF-LNTGQVCLGTERVYVERPIFDRFVAALKAR  306 (481)
T ss_pred             CHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999 999999999999999999999999999999


Q ss_pred             HHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC------CCCceeeceEeeCCCCCCccccccc
Q 009109          334 LKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD------EKQLKIAPTILLDVPDDSTIMKEEI  405 (543)
Q Consensus       334 ~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~  405 (543)
                      ++++++|+|.+ ++++||++++.+++++.++++++.+ ++++++||..+      ..|+|++|||+.+++++|++++||+
T Consensus       307 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~  386 (481)
T TIGR03216       307 AESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEI  386 (481)
T ss_pred             HHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCC
Confidence            99999999987 7799999999999999999999875 67999999753      3589999999999999999999999


Q ss_pred             ccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcch
Q 009109          406 FGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG  485 (543)
Q Consensus       406 fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g  485 (543)
                      ||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.|+||++..  ..+.+||||+|.||+|+++|
T Consensus       387 FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g  464 (481)
T TIGR03216       387 FGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFL--RDLRTPFGGSKLSGIGREGG  464 (481)
T ss_pred             CCceEEEEEeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCC--CCCCCCcCCcccCcCCcCch
Confidence            9999999999999999999999999999999999999999999999999999998765  35789999999999999999


Q ss_pred             HHHHHHhhhceEEEEe
Q 009109          486 KFSFDAFSHKKAVLYR  501 (543)
Q Consensus       486 ~~~~~~~~~~k~v~~~  501 (543)
                      .+++++||+.|+|+++
T Consensus       465 ~~~l~~f~~~k~v~~~  480 (481)
T TIGR03216       465 VHSLEFYTELTNVCIK  480 (481)
T ss_pred             HHHHHHhhceEEEEEe
Confidence            9999999999999763

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=100.00  E-value=8.5e-97  Score=787.72  Aligned_cols=464  Identities=25%  Similarity=0.380  Sum_probs=429.4

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS--RKTKSYEWRMSQIQ   96 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~--w~~~~~~~R~~iL~   96 (543)
                      ++++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||+.  |++++..+|.++|+
T Consensus         3 ~~~~~i~g-~~~~~~~~~~~~v~--------~P~t~~~i~~v-~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~   72 (476)
T cd07142           3 HTKLFING-QFVDAASGKTFPTI--------DPRNGEVIAHV-AEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILL   72 (476)
T ss_pred             cccceECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHH
Confidence            57889999 99987777777777        88899999776 999999999999999999975  99999999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109           97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI  176 (543)
Q Consensus        97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i  176 (543)
                      +++++|++++++|++++++|+|||..+++..|+..+++.+++++.+.++..+.. .   ....+...+++++|+|||++|
T Consensus        73 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~-~---~~~~~~~~~~~~~P~GVv~~I  148 (476)
T cd07142          73 RFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMT-L---PADGPHHVYTLHEPIGVVGQI  148 (476)
T ss_pred             HHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-c---ccCCCceEEEEEeceeeEEEE
Confidence            999999999999999999999999999876699999999999988766543221 1   111223467899999999999


Q ss_pred             cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109          177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      +|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+|+| +.+.+..|+.|+ +|.|+|||
T Consensus       149 ~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTG  228 (476)
T cd07142         149 IPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTG  228 (476)
T ss_pred             CCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEEC
Confidence            9999999999999999999999999999999999999999999999 99999999999 556889999986 99999999


Q ss_pred             ChHHHHHHHHHHhc-ccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109          254 SPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN  332 (543)
Q Consensus       254 S~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~  332 (543)
                      |+++|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++
T Consensus       229 s~~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~  307 (476)
T cd07142         229 STEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALF-FNQGQCCCAGSRTFVHESIYDEFVEKAKA  307 (476)
T ss_pred             cHHHHHHHHHHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHh-cCCCCCCCCCeeEEEeHHHHHHHHHHHHH
Confidence            99999999999997 99999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccce
Q 009109          333 ELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPL  409 (543)
Q Consensus       333 ~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv  409 (543)
                      ++.++++|+|.+ ++++||++++.+++++.++++++.+ |+++++||... ..|+|++|||+.+++++|++++||+||||
T Consensus       308 ~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPv  387 (476)
T cd07142         308 RALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPV  387 (476)
T ss_pred             HHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCce
Confidence            999999999977 6799999999999999999998865 67999999763 46899999999999999999999999999


Q ss_pred             eeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHH
Q 009109          410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF  489 (543)
Q Consensus       410 l~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~  489 (543)
                      ++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||++.  ...+.+||||+|.||+|+++|.+++
T Consensus       388 l~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~--~~~~~~PfGG~k~SG~G~~~g~~~~  465 (476)
T cd07142         388 QSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYD--VFDASIPFGGYKMSGIGREKGIYAL  465 (476)
T ss_pred             EEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCC--CCCCCCCCCCCccCcCCccchHHHH
Confidence            99999999999999999999999999999999999999999999999999764  3567899999999999999999999


Q ss_pred             HHhhhceEEE
Q 009109          490 DAFSHKKAVL  499 (543)
Q Consensus       490 ~~~~~~k~v~  499 (543)
                      ++||+.|+++
T Consensus       466 ~~ft~~k~v~  475 (476)
T cd07142         466 NNYLQVKAVV  475 (476)
T ss_pred             HHhhheeEEe
Confidence            9999999985

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=100.00  E-value=1.7e-96  Score=785.13  Aligned_cols=464  Identities=18%  Similarity=0.268  Sum_probs=423.7

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a   99 (543)
                      -++|||| +|+.+  +.+++++        ||.||++++.+ +.++.+|+++|+++|++||+.|++++..+|.++|++++
T Consensus        21 ~~~~I~G-~~~~~--~~~~~~~--------nP~t~~~i~~~-~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a   88 (508)
T PLN02315         21 LGCYVGG-EWRAN--GPLVSSV--------NPANNQPIAEV-VEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIG   88 (508)
T ss_pred             cCceECC-EEecC--CCeeeeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence            4689999 99864  4556655        88899999766 99999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW  179 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~  179 (543)
                      ++|+++.++|++++++|+|||+.++. .|+..+++.++|+++.++++.+.. .+.  ...+...++.++|+|||++|+||
T Consensus        89 ~~l~~~~~~la~~~~~e~GK~~~~a~-~ev~~~i~~~~~~~~~~~~l~~~~-~~~--~~~~~~~~~~~~P~GVV~~I~Pw  164 (508)
T PLN02315         89 DALRAKLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSI-IPS--ERPNHMMMEVWNPLGIVGVITAF  164 (508)
T ss_pred             HHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-ccC--CCCCceeEEEEecceEEEEECCC
Confidence            99999999999999999999999997 599999999999998777653321 111  11233456789999999999999


Q ss_pred             chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHH----HHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeC
Q 009109          180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL----LAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~----l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      |||+.++++++++||++||+||+|||+.+|.++..    +.+++.++ +|+|+||+++|+.+.+..|+.|+ +|+|+|||
T Consensus       165 N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTG  244 (508)
T PLN02315        165 NFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTG  244 (508)
T ss_pred             cchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEEC
Confidence            99999999999999999999999999999999887    56777888 99999999999777899999986 99999999


Q ss_pred             ChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHH
Q 009109          254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE  333 (543)
Q Consensus       254 S~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~  333 (543)
                      |+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++
T Consensus       245 S~~~G~~v~~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~  323 (508)
T PLN02315        245 SSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAV-GTAGQRCTTCRRLLLHESIYDDVLEQLLTV  323 (508)
T ss_pred             CHHHHHHHHHHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEeHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999 999999999999999999999999999999


Q ss_pred             HHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCccccccccccee
Q 009109          334 LKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLL  410 (543)
Q Consensus       334 ~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl  410 (543)
                      ++++++|||.+ .+++|||+++.+.+++.++++++.+ ++++++||.. +..|+|++|||+ +++++|++++||+||||+
T Consensus       324 ~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl  402 (508)
T PLN02315        324 YKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVL  402 (508)
T ss_pred             HHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEE
Confidence            99999999987 5789999999999999999999875 6799999975 346899999999 599999999999999999


Q ss_pred             eeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHh--hccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHH
Q 009109          411 PIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQ--NISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS  488 (543)
Q Consensus       411 ~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~--~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~  488 (543)
                      +|++|+|+||||+++|+++|||++||||+|.+.++++++  ++++|.|+||+... ...+.+||||+|.||+|+++|.++
T Consensus       403 ~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~-~~~~~~PfGG~k~SG~G~~~G~~~  481 (508)
T PLN02315        403 YVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTN-GAEIGGAFGGEKATGGGREAGSDS  481 (508)
T ss_pred             EEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCC-CCCCCCCCCccccccCCccchHHH
Confidence            999999999999999999999999999999999999985  79999999998654 345678999999999999999999


Q ss_pred             HHHhhhceEEEEec
Q 009109          489 FDAFSHKKAVLYRS  502 (543)
Q Consensus       489 ~~~~~~~k~v~~~~  502 (543)
                      +++||+.|+|+++.
T Consensus       482 l~~ft~~k~v~~~~  495 (508)
T PLN02315        482 WKQYMRRSTCTINY  495 (508)
T ss_pred             HHHHhhEEEEEEec
Confidence            99999999988763

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=5e-96  Score=782.77  Aligned_cols=466  Identities=23%  Similarity=0.347  Sum_probs=431.4

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a   99 (543)
                      .++|||| +|+.+ ++.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|++++..+|.++|++++
T Consensus         3 ~~~~i~g-~~~~~-~~~~~~~~--------~P~t~~~i~~~-~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a   71 (475)
T PRK13473          3 TKLLING-ELVAG-EGEKQPVY--------NPATGEVLAEI-AEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLA   71 (475)
T ss_pred             ccceECC-EEecC-CCCEEeeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence            5789999 99876 56666666        88899999766 99999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW  179 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~  179 (543)
                      ++|++++++|++++++|+|||..++...|+..+++.+++++...+.+.+.....   ...+...+++++|+|||++|+||
T Consensus        72 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~---~~~~~~~~~~r~P~GVv~~I~p~  148 (475)
T PRK13473         72 DAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGE---YLEGHTSMIRRDPVGVVASIAPW  148 (475)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc---CCCCceeEEEEecceeEEEEccC
Confidence            999999999999999999999998865699999999999998777653321111   11233567899999999999999


Q ss_pred             chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHH
Q 009109          180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRV  257 (543)
Q Consensus       180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~  257 (543)
                      |||+.+.++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+++| +.+.+..|+.|+ +|.|+||||+++
T Consensus       149 N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~alP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~  228 (475)
T PRK13473        149 NYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIAT  228 (475)
T ss_pred             ChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHhCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHH
Confidence            999999999999999999999999999999999999999999999999999999 778899999996 999999999999


Q ss_pred             HHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhh
Q 009109          258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF  337 (543)
Q Consensus       258 g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l  337 (543)
                      |+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++
T Consensus       229 g~~i~~~aa~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l  307 (475)
T PRK13473        229 GKHVLSAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGY-YNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATL  307 (475)
T ss_pred             HHHHHHHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999999999 9999999999999999999999999999999999


Q ss_pred             cCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-C-CEEEECcccC-CCCceeeceEeeCCCCCCcccccccccceeeee
Q 009109          338 FGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-S-DKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV  413 (543)
Q Consensus       338 ~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~-~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~  413 (543)
                      ++|+|.+ ++++||++++.+++++.++++++.+ + +++++||... ..|+|++|||+.++++++.+++||+||||++|+
T Consensus       308 ~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~  387 (475)
T PRK13473        308 KVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVT  387 (475)
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEe
Confidence            9999987 6789999999999999999999875 4 6999999764 368899999999999999999999999999999


Q ss_pred             ccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhh
Q 009109          414 TVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS  493 (543)
Q Consensus       414 ~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~  493 (543)
                      +|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++||
T Consensus       388 ~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~t  465 (475)
T PRK13473        388 PFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFM--LVSEMPHGGQKQSGYGKDMSLYGLEDYT  465 (475)
T ss_pred             ccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHHh
Confidence            99999999999999999999999999999999999999999999998765  3577999999999999999999999999


Q ss_pred             hceEEEEec
Q 009109          494 HKKAVLYRS  502 (543)
Q Consensus       494 ~~k~v~~~~  502 (543)
                      +.|++++++
T Consensus       466 ~~k~i~~~~  474 (475)
T PRK13473        466 VVRHVMVKH  474 (475)
T ss_pred             ceEEEEEec
Confidence            999998754

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=100.00  E-value=3.2e-96  Score=786.25  Aligned_cols=464  Identities=23%  Similarity=0.388  Sum_probs=431.6

Q ss_pred             ceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 009109           21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN  100 (543)
Q Consensus        21 ~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~  100 (543)
                      ++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|++++.++|.++|+++++
T Consensus         2 ~~~i~g-~~~~~~~~~~~~~~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~   71 (488)
T TIGR02299         2 GHFIDG-EFVPSESGETFETL--------SPATNEVLGSV-ARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIAD   71 (488)
T ss_pred             CccCCC-EEecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence            579999 99988777777777        88899999766 999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCc
Q 009109          101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN  180 (543)
Q Consensus       101 ~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N  180 (543)
                      +|++++++|++++++|+||++.+++ .|+..+++.++++++.++++........    .....+++++|+|||++|+|||
T Consensus        72 ~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~I~p~N  146 (488)
T TIGR02299        72 LIEQHADEIAVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPV----DTHLNYTVRVPVGPVGLITPWN  146 (488)
T ss_pred             HHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccC----CCceEEEEEEecceEEEECCCc
Confidence            9999999999999999999999998 5999999999999988875544332211    1235678999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHH
Q 009109          181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRV  257 (543)
Q Consensus       181 ~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~  257 (543)
                      ||+.+.++++++||++||+||+|||+.+|.++.++.+++.++ +|+|+||+++| +.+.++.|+.|+ +|.|+||||+++
T Consensus       147 ~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~  226 (488)
T TIGR02299       147 APFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETAT  226 (488)
T ss_pred             cHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHH
Confidence            999999999999999999999999999999999999999999 99999999998 667888999996 999999999999


Q ss_pred             HHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhh
Q 009109          258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF  337 (543)
Q Consensus       258 g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l  337 (543)
                      |+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++
T Consensus       227 G~~i~~~aa~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l  305 (488)
T TIGR02299       227 GSIIMRNGADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIF-SFNGERCTASSRLLVQESIAEDFVEKLVERVRAI  305 (488)
T ss_pred             HHHHHHHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhC
Confidence            999999999999999999999999999999999999999999999 9999999999999999999999999999999999


Q ss_pred             cCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC--------CCCceeeceEeeCCCCCCccccccccc
Q 009109          338 FGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD--------EKQLKIAPTILLDVPDDSTIMKEEIFG  407 (543)
Q Consensus       338 ~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~--------~~g~~~~Ptvl~~~~~~~~~~~~E~fg  407 (543)
                      ++|+|.+ ++++||++++.+++++.++++++.+ ++++++||...        ..|+|++|||+.+++++|++++||+||
T Consensus       306 ~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~Fg  385 (488)
T TIGR02299       306 RVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFG  385 (488)
T ss_pred             CcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcC
Confidence            9999987 6789999999999999999998865 67999998653        248899999999999999999999999


Q ss_pred             ceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHH
Q 009109          408 PLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF  487 (543)
Q Consensus       408 Pvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~  487 (543)
                      ||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+...  ..+.+||||+|.||+|+++|.+
T Consensus       386 Pvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~  463 (488)
T TIGR02299       386 PVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNV--RHLPTPFGGVKASGIGREGGTY  463 (488)
T ss_pred             CeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCC--CCCCCCCCCCccCcCCccchHH
Confidence            99999999999999999999999999999999999999999999999999998764  4567999999999999999999


Q ss_pred             HHHHhhhceEEEEec
Q 009109          488 SFDAFSHKKAVLYRS  502 (543)
Q Consensus       488 ~~~~~~~~k~v~~~~  502 (543)
                      ++++||+.|+|+++.
T Consensus       464 ~~~~~~~~k~i~~~~  478 (488)
T TIGR02299       464 SFDFYTETKNVALAL  478 (488)
T ss_pred             HHHHHhceEEEEEec
Confidence            999999999998753

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=100.00  E-value=4.9e-96  Score=782.43  Aligned_cols=461  Identities=24%  Similarity=0.339  Sum_probs=425.0

Q ss_pred             ceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 009109           21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN  100 (543)
Q Consensus        21 ~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~  100 (543)
                      ++|||| +|+.+.++.+|+++        ||.||++++.+ +.++.+|+++|+++|++||+.|+++|..+|.++|+++++
T Consensus         2 ~~~i~g-~~~~~~~~~~~~v~--------nP~tg~~i~~~-~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~   71 (479)
T cd07116           2 DNFIGG-EWVAPVKGEYFDNI--------TPVTGKVFCEV-PRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIAD   71 (479)
T ss_pred             CceECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence            589999 99988777777777        88899999765 999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCc
Q 009109          101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN  180 (543)
Q Consensus       101 ~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N  180 (543)
                      +|++++++|++++++|+|||..++...|+..+++.++++++..+......    .....+...+++++|+|||++|+|||
T Consensus        72 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~I~PwN  147 (479)
T cd07116          72 RMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSI----SEIDENTVAYHFHEPLGVVGQIIPWN  147 (479)
T ss_pred             HHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCee----ecCCCCceEEEEEeccceEEEECCCc
Confidence            99999999999999999999999875699999999999998776542211    11112335678999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHH
Q 009109          181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVG  258 (543)
Q Consensus       181 ~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g  258 (543)
                      ||+.+.++++++||++||+||+|||+.+|.++..+++++.+++|+|+||+|+| +.+.+..|++|+ +|.|+||||+++|
T Consensus       148 ~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~alP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G  227 (479)
T cd07116         148 FPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTG  227 (479)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHHCCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHH
Confidence            99999999999999999999999999999999999999999999999999999 677899999996 9999999999999


Q ss_pred             HHHHHHHhcccCcEEEecCCCCcEEEcCC------CCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109          259 RIVMAAAAKHLTPVILELGGKSPAVVDST------INLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN  332 (543)
Q Consensus       259 ~~i~~~a~~~~~~~~lelgG~~p~iV~~d------aDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~  332 (543)
                      +.|++.++++++|+++|+|||||+||++|      ||++.|++.++++ + +|+||.|++++|||||+++||+|+++|++
T Consensus       228 ~~i~~~aa~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~-~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~  305 (479)
T cd07116         228 RLIMQYASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMF-A-LNQGEVCTCPSRALIQESIYDRFMERALE  305 (479)
T ss_pred             HHHHHHHHcCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHH-H-hcCCCCCCCCeEEEEcHHHHHHHHHHHHH
Confidence            99999999999999999999999999987      7999999999985 5 69999999999999999999999999999


Q ss_pred             HHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCCCCccccccc
Q 009109          333 ELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEI  405 (543)
Q Consensus       333 ~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~  405 (543)
                      +++++++|+|.+ .+++||++++.++++++++++++.+ ++++++||...     ..|+|+.|||+.+++ +|++++||+
T Consensus       306 ~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~  384 (479)
T cd07116         306 RVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEI  384 (479)
T ss_pred             HHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCC
Confidence            999999999987 6789999999999999999999875 56999999753     258899999999875 999999999


Q ss_pred             ccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcch
Q 009109          406 FGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG  485 (543)
Q Consensus       406 fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g  485 (543)
                      ||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|
T Consensus       385 FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g  462 (479)
T cd07116         385 FGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHL--YPAHAAFGGYKQSGIGRENH  462 (479)
T ss_pred             cCceEEEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCcCCCccCcCCccCh
Confidence            9999999999999999999999999999999999999999999999999999997653  46789999999999999999


Q ss_pred             HHHHHHhhhceEEEE
Q 009109          486 KFSFDAFSHKKAVLY  500 (543)
Q Consensus       486 ~~~~~~~~~~k~v~~  500 (543)
                      .+++++|++.|++++
T Consensus       463 ~~~l~~~~~~k~~~~  477 (479)
T cd07116         463 KMMLDHYQQTKNLLV  477 (479)
T ss_pred             HHHHHHhhceEEEEE
Confidence            999999999999876

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=100.00  E-value=5.1e-96  Score=782.70  Aligned_cols=465  Identities=26%  Similarity=0.383  Sum_probs=431.1

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMSQI   95 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~---~w~~~~~~~R~~iL   95 (543)
                      ++++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||+   .|+++|.++|.++|
T Consensus         6 ~~~~~I~g-~~~~~~~~~~~~~~--------~P~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L   75 (481)
T cd07141           6 YTKIFINN-EWHDSVSGKTFPTI--------NPATGEKICEV-QEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLL   75 (481)
T ss_pred             cccceECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHH
Confidence            46789999 99988777777777        88899999765 99999999999999999998   69999999999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEE
Q 009109           96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLV  175 (543)
Q Consensus        96 ~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~  175 (543)
                      ++++++|+++.++|++++++|+|||..++...|+..+++.++++++..+++.+... .   ...+...+++++|+|||++
T Consensus        76 ~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~-~---~~~~~~~~~~~~P~GVv~~  151 (481)
T cd07141          76 NKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTI-P---MDGDFFTYTRHEPVGVCGQ  151 (481)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCcee-c---CCCCceEEEEEeceeEEEE
Confidence            99999999999999999999999999777556999999999999998887644221 1   1122346789999999999


Q ss_pred             EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEe
Q 009109          176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYT  252 (543)
Q Consensus       176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ft  252 (543)
                      |+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+|+| +.+.+..|+.|+ +|.|+||
T Consensus       152 I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ft  231 (481)
T cd07141         152 IIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFT  231 (481)
T ss_pred             EccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEE
Confidence            99999999999999999999999999999999999999999999999 99999999999 567788999996 9999999


Q ss_pred             CChHHHHHHHHHHhc-ccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHH
Q 009109          253 GSPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR  331 (543)
Q Consensus       253 GS~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~  331 (543)
                      ||+++|+.|++.++. ++||+++|+|||||+||++|||++.|++.|++++| .|+||.|++++|||||+++||+|+++|+
T Consensus       232 Gs~~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~  310 (481)
T cd07141         232 GSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALF-FNMGQCCCAGSRTFVQESIYDEFVKRSV  310 (481)
T ss_pred             CcHHHHHHHHHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCcccCCeEEEEcHHHHHHHHHHHH
Confidence            999999999999887 89999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccc
Q 009109          332 NELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGP  408 (543)
Q Consensus       332 ~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgP  408 (543)
                      ++++++++|+|.+ .+++||++++.+++++.++++++.+ ++++++||... ..|+|++|||+.+++++|++++||+|||
T Consensus       311 ~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgP  390 (481)
T cd07141         311 ERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGP  390 (481)
T ss_pred             HHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCC
Confidence            9999999999987 5899999999999999999999865 67999999763 4689999999999999999999999999


Q ss_pred             eeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHH
Q 009109          409 LLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS  488 (543)
Q Consensus       409 vl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~  488 (543)
                      |++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.++
T Consensus       391 vl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~  468 (481)
T cd07141         391 VQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNV--VSPQAPFGGYKMSGNGRELGEYG  468 (481)
T ss_pred             eEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCCCCcccCcCCccchHHH
Confidence            9999999999999999999999999999999999999999999999999998653  56789999999999999999999


Q ss_pred             HHHhhhceEEEE
Q 009109          489 FDAFSHKKAVLY  500 (543)
Q Consensus       489 ~~~~~~~k~v~~  500 (543)
                      +++||+.|++++
T Consensus       469 ~~~ft~~k~v~~  480 (481)
T cd07141         469 LQEYTEVKTVTI  480 (481)
T ss_pred             HHHHhheEEEEE
Confidence            999999999875

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=100.00  E-value=9.7e-96  Score=780.57  Aligned_cols=465  Identities=25%  Similarity=0.343  Sum_probs=428.5

Q ss_pred             ceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 009109           21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN  100 (543)
Q Consensus        21 ~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~  100 (543)
                      ++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|+++|..+|.++|+++++
T Consensus         2 ~~~i~g-~~~~~~~~~~~~~~--------~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~   71 (478)
T cd07085           2 KLFING-EWVESKTTEWLDVY--------NPATGEVIARV-PLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQ   71 (478)
T ss_pred             CceECC-EEecCCCCCeEEee--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence            479999 99988666677777        88899999766 999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCc
Q 009109          101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN  180 (543)
Q Consensus       101 ~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N  180 (543)
                      +|++++++|++++++|+|||+.+++ .|+..+++.+++++...+. ...+....  ...+...+++++|+|||++|+|||
T Consensus        72 ~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N  147 (478)
T cd07085          72 LLEENLDELARLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHL-LKGEYLEN--VARGIDTYSYRQPLGVVAGITPFN  147 (478)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHH-hCCeeccc--CCCCceeEEEEecceEEEEECCCC
Confidence            9999999999999999999999997 4999999999999876553 32222111  112345689999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHH
Q 009109          181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVG  258 (543)
Q Consensus       181 ~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g  258 (543)
                      ||+.+.++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+++|+.+.+..|++|+ +|.|+||||+++|
T Consensus       148 ~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g  227 (478)
T cd07085         148 FPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVG  227 (478)
T ss_pred             hHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHH
Confidence            999999999999999999999999999999999999999998 99999999999778899999997 9999999999999


Q ss_pred             HHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhc
Q 009109          259 RIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF  338 (543)
Q Consensus       259 ~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~  338 (543)
                      +.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|++++++++
T Consensus       228 ~~i~~~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~  306 (478)
T cd07085         228 EYIYERAAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAF-GAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLK  306 (478)
T ss_pred             HHHHHHHhhcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999999 99999999999999999999999999999999999


Q ss_pred             CCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCCCCcccccccccceee
Q 009109          339 GKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLP  411 (543)
Q Consensus       339 ~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~  411 (543)
                      +|+|.+ ++++||++++.+++++.++++++.+ ++++++||...     .+|+|++|||+.+++++|++++||+||||++
T Consensus       307 ~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~  386 (478)
T cd07085         307 VGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLS  386 (478)
T ss_pred             CCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEE
Confidence            999976 7799999999999999999999865 67999998642     3589999999999999999999999999999


Q ss_pred             eeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC--CcchHHHH
Q 009109          412 IVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG--SYHGKFSF  489 (543)
Q Consensus       412 v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~  489 (543)
                      |++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ...+.+||||+|.||+|  +++|.+++
T Consensus       387 v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~~~g~~~~  465 (478)
T cd07085         387 IVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIP-VPLAFFSFGGWKGSFFGDLHFYGKDGV  465 (478)
T ss_pred             EEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCC-CCCCCCCCCCcccccCCCCcCChHHHH
Confidence            9999999999999999999999999999999999999999999999998743 45578999999999999  46899999


Q ss_pred             HHhhhceEEEEe
Q 009109          490 DAFSHKKAVLYR  501 (543)
Q Consensus       490 ~~~~~~k~v~~~  501 (543)
                      ++||+.|+|++.
T Consensus       466 ~~~~~~k~v~~~  477 (478)
T cd07085         466 RFYTQTKTVTSR  477 (478)
T ss_pred             HHhcceEEEEEe
Confidence            999999998764

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-96  Score=774.86  Aligned_cols=448  Identities=21%  Similarity=0.362  Sum_probs=418.3

Q ss_pred             cccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhh
Q 009109           46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF  125 (543)
Q Consensus        46 ~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~  125 (543)
                      +.++||.||++++.+ +.++.+|+++++++|++||+.|++++..+|.++|++++++|++++++|++++++|+|||..++.
T Consensus         9 ~~~~nP~t~~~i~~~-~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~   87 (462)
T PRK13968          9 AISVNPATGEQLSVL-PWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQAR   87 (462)
T ss_pred             eEeECCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHH
Confidence            667799999999766 9999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCC
Q 009109          126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS  205 (543)
Q Consensus       126 ~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps  205 (543)
                       .|+..+++.+++++....++.+.....    ..+...+++++|+|||++|+|||||++++++++++||++||+||+|||
T Consensus        88 -~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs  162 (462)
T PRK13968         88 -AEVAKSANLCDWYAEHGPAMLKAEPTL----VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHA  162 (462)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhhCCcccc----CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence             499999999999999888876543211    123467889999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEE
Q 009109          206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV  283 (543)
Q Consensus       206 ~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~i  283 (543)
                      +.+|.++.++++++.++ +|+|++|+|+|+.+.+..|+.|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+|
T Consensus       163 ~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~i  242 (462)
T PRK13968        163 PNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFI  242 (462)
T ss_pred             CcChHHHHHHHHHHHHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceE
Confidence            99999999999999999 99999999998545556688886 99999999999999999999999999999999999999


Q ss_pred             EcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHH
Q 009109          284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLAS  362 (543)
Q Consensus       284 V~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~  362 (543)
                      |++|||++.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.+++++.+
T Consensus       243 V~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~  321 (462)
T PRK13968        243 VLNDADLELAVKAAVAGRY-QNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHH  321 (462)
T ss_pred             ECCCCCHHHHHHHHHHHHH-hccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHH
Confidence            9999999999999999999 99999999999999999999999999999999999999987 678999999999999999


Q ss_pred             HHHhhhc-CCEEEECcccCC-CCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCC
Q 009109          363 LLDEDKV-SDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD  440 (543)
Q Consensus       363 ~i~~a~~-~~~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d  440 (543)
                      +++++.. ++++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|
T Consensus       322 ~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d  401 (462)
T PRK13968        322 QVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTD  401 (462)
T ss_pred             HHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCC
Confidence            9999865 679999997543 58999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEec
Q 009109          441 EQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       441 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~  502 (543)
                      .+.++++++++++|+|+||+...  ..+.+||||+|.||+|+++|.+|+++||+.|+|++.+
T Consensus       402 ~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~  461 (462)
T PRK13968        402 ETQARQMAARLECGGVFINGYCA--SDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDR  461 (462)
T ss_pred             HHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCccccccCcCchHHHHHHhcceeEEEEec
Confidence            99999999999999999998753  5678999999999999999999999999999998753

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=100.00  E-value=2.5e-95  Score=775.30  Aligned_cols=466  Identities=24%  Similarity=0.350  Sum_probs=429.1

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh-hhc-CCCHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN-SRK-TKSYEWRMSQIQ   96 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~-~w~-~~~~~~R~~iL~   96 (543)
                      ..++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||+ .|+ .+|..+|.++|+
T Consensus         6 ~~~~~I~G-~~~~~~~~~~~~v~--------~P~t~~~i~~~-~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~   75 (481)
T cd07143           6 PTGLFING-EFVDSVHGGTVKVY--------NPSTGKLITKI-AEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLS   75 (481)
T ss_pred             ccCceECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHH
Confidence            46899999 99988777667766        88899999765 99999999999999999998 599 999999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109           97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI  176 (543)
Q Consensus        97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i  176 (543)
                      +++++|++++++|++++++|+|||..++...|+..+++.++++++..++..+.. ..   ...+...+++++|+|||++|
T Consensus        76 ~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~-~~---~~~~~~~~~~~~P~GVv~~I  151 (481)
T cd07143          76 KLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQV-IE---TDIKKLTYTRHEPIGVCGQI  151 (481)
T ss_pred             HHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-cc---CCCCceEEEEEecceeEEEE
Confidence            999999999999999999999999977655699999999999998876543221 11   11234567899999999999


Q ss_pred             cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109          177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      +|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+|+| +.+.+..|+.|+ +|.|+|||
T Consensus       152 ~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTG  231 (481)
T cd07143         152 IPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTG  231 (481)
T ss_pred             CCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEEC
Confidence            9999999999999999999999999999999999999999999999 99999999999 567889999996 99999999


Q ss_pred             ChHHHHHHHHHHhc-ccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109          254 SPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN  332 (543)
Q Consensus       254 S~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~  332 (543)
                      |+++|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|++
T Consensus       232 s~~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~-~naGQ~C~a~~rv~V~~~i~d~f~~~l~~  310 (481)
T cd07143         232 STLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIF-FNHGQVCCAGSRIYVQEGIYDKFVKRFKE  310 (481)
T ss_pred             chHHHHHHHHHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHH-hccCCCCCCCcEEEEeHhHHHHHHHHHHH
Confidence            99999999999885 79999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccce
Q 009109          333 ELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPL  409 (543)
Q Consensus       333 ~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv  409 (543)
                      +++++++|+|.+ ++++||++++.+++++.++++++.. ++++++||... ..|+|++|||+.++++++++++||+||||
T Consensus       311 ~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPv  390 (481)
T cd07143         311 KAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPV  390 (481)
T ss_pred             HHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCe
Confidence            999999999976 6789999999999999999998865 67999999764 36899999999999999999999999999


Q ss_pred             eeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHH
Q 009109          410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF  489 (543)
Q Consensus       410 l~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~  489 (543)
                      ++|++|+|++|||+++|+++|||++||||+|.+.+.++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++
T Consensus       391 l~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l  468 (481)
T cd07143         391 VAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNL--LHHQVPFGGYKQSGIGRELGEYAL  468 (481)
T ss_pred             EEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCCCCccccccCcccHHHHH
Confidence            999999999999999999999999999999999999999999999999998754  567899999999999999999999


Q ss_pred             HHhhhceEEEEe
Q 009109          490 DAFSHKKAVLYR  501 (543)
Q Consensus       490 ~~~~~~k~v~~~  501 (543)
                      ++||+.|+|.++
T Consensus       469 ~~~t~~k~i~~~  480 (481)
T cd07143         469 ENYTQIKAVHIN  480 (481)
T ss_pred             HHHhCeEEEEEe
Confidence            999999998753

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=100.00  E-value=1.9e-95  Score=777.75  Aligned_cols=463  Identities=21%  Similarity=0.307  Sum_probs=428.6

Q ss_pred             eeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHH
Q 009109           22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANM  101 (543)
Q Consensus        22 ~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~  101 (543)
                      .|||| +|+.+. +.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|++++.++|.++|++++++
T Consensus         1 ~~i~g-~~~~~~-~~~~~~~--------~P~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~   69 (478)
T cd07086           1 GVIGG-EWVGSG-GETFTSR--------NPANGEPIARV-FPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEA   69 (478)
T ss_pred             CcCCC-EEecCC-CCEEeeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence            48999 999875 5566666        88899999766 8899999999999999999999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCch
Q 009109          102 IEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNY  181 (543)
Q Consensus       102 l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~  181 (543)
                      |++++++|++++++|+|||+.++.. |+..+++.+++++...+.+.... ...  ...+...+++++|+|||++|+||||
T Consensus        70 l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~-~~~--~~~~~~~~~~~~P~GVv~~I~pwN~  145 (478)
T cd07086          70 LRKKKEALGRLVSLEMGKILPEGLG-EVQEMIDICDYAVGLSRMLYGLT-IPS--ERPGHRLMEQWNPLGVVGVITAFNF  145 (478)
T ss_pred             HHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcc-ccc--CCCCceEEEEEecceeEEEECCCCc
Confidence            9999999999999999999999984 99999999999998887753322 111  1123356789999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-----cCCCceEeecCChHHHHHHHhCC-CCEEEEeCCh
Q 009109          182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-----VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSP  255 (543)
Q Consensus       182 P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-----lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~  255 (543)
                      |+.++++++++||++||+||+|||+.+|.++..+++++.++     +|+|+||+|+|+.+.+..|+.|+ +|.|+||||+
T Consensus       146 P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~  225 (478)
T cd07086         146 PVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGST  225 (478)
T ss_pred             HHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcH
Confidence            99999999999999999999999999999999999999986     89999999999656888889887 9999999999


Q ss_pred             HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109          256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK  335 (543)
Q Consensus       256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~  335 (543)
                      ++|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++| .|+||.|++++|||||+++||+|+++|+++++
T Consensus       226 ~~g~~i~~~aa~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~  304 (478)
T cd07086         226 EVGRRVGETVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAV-GTAGQRCTTTRRLIVHESVYDEFLERLVKAYK  304 (478)
T ss_pred             HHHHHHHHHHhccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHH-hccCCCCcCCeEEEEcHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999 99999999999999999999999999999999


Q ss_pred             hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC---CCceeeceEeeCCCCCCccccccccccee
Q 009109          336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPLL  410 (543)
Q Consensus       336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl  410 (543)
                      ++++|||.+ .+++||++++.+++++.++++++.+ ++++++||....   .|+|++|||+.+++++|++++||+||||+
T Consensus       305 ~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl  384 (478)
T cd07086         305 QVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPIL  384 (478)
T ss_pred             hCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEE
Confidence            999999987 5789999999999999999999875 679999997644   58899999999999999999999999999


Q ss_pred             eeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhh--ccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHH
Q 009109          411 PIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQN--ISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS  488 (543)
Q Consensus       411 ~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~--l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~  488 (543)
                      +|++|+|+||||+++|+++|||++||||+|.+.+++++++  +++|+|+||+++.+ ..+.+||||+|.||+|+++|.++
T Consensus       385 ~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~-~~~~~PfgG~~~SG~G~~~g~~~  463 (478)
T cd07086         385 YVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDA  463 (478)
T ss_pred             EEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCC-CCCCCCCCCcccccCCccchHHH
Confidence            9999999999999999999999999999999999999999  99999999998654 55789999999999999999999


Q ss_pred             HHHhhhceEEEEe
Q 009109          489 FDAFSHKKAVLYR  501 (543)
Q Consensus       489 ~~~~~~~k~v~~~  501 (543)
                      +++|++.|+|+++
T Consensus       464 ~~~f~~~k~i~~~  476 (478)
T cd07086         464 WKQYMRRSTCTIN  476 (478)
T ss_pred             HHHhhceEEEEEe
Confidence            9999999999874

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=2.9e-95  Score=770.09  Aligned_cols=449  Identities=21%  Similarity=0.361  Sum_probs=418.0

Q ss_pred             cccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhh
Q 009109           46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF  125 (543)
Q Consensus        46 ~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~  125 (543)
                      +.+.||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||+.++.
T Consensus         3 ~~~~~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~   81 (457)
T PRK09406          3 IATINPATGETVKTF-TALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAK   81 (457)
T ss_pred             eeeECCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH
Confidence            344599999999765 9999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCC
Q 009109          126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS  205 (543)
Q Consensus       126 ~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps  205 (543)
                      . |+..+++.++++++.++++......... ...+...+++++|+|||++|+|||||++++++++++||++||+||+|||
T Consensus        82 ~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps  159 (457)
T PRK09406         82 A-EALKCAKGFRYYAEHAEALLADEPADAA-AVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHA  159 (457)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhCCcccccc-CCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECC
Confidence            4 9999999999999999888654422111 1123456889999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEE
Q 009109          206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV  283 (543)
Q Consensus       206 ~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~i  283 (543)
                      +.+|.++.++++++.++ +|+|+||+|+++.+.+..|+.|+ +|.|+||||+++|+.|++.+++++||+++|+|||||+|
T Consensus       160 ~~~p~~~~~l~~l~~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~i  239 (457)
T PRK09406        160 SNVPQTALYLADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFI  239 (457)
T ss_pred             CcCcHHHHHHHHHHHHhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeE
Confidence            99999999999999999 99999999987656788899885 99999999999999999999999999999999999999


Q ss_pred             EcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHH
Q 009109          284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLAS  362 (543)
Q Consensus       284 V~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~  362 (543)
                      |++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.+
T Consensus       240 V~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~  318 (457)
T PRK09406        240 VMPSADLDRAAETAVTARV-QNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEK  318 (457)
T ss_pred             ECCCCCHHHHHHHHHHHHh-hCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999 99999999999999999999999999999999999999987 678999999999999999


Q ss_pred             HHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCC
Q 009109          363 LLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD  440 (543)
Q Consensus       363 ~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d  440 (543)
                      +++++.+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|
T Consensus       319 ~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d  398 (457)
T PRK09406        319 QVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRD  398 (457)
T ss_pred             HHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence            9998865 67999999764 368999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEE
Q 009109          441 EQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY  500 (543)
Q Consensus       441 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~  500 (543)
                      .+.++++++++++|+|+||+++.  ..+.+||||+|.||+|+++|.+++++||+.|+|.+
T Consensus       399 ~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~  456 (457)
T PRK09406        399 EAEQERFIDDLEAGQVFINGMTV--SYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI  456 (457)
T ss_pred             HHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence            99999999999999999998764  46789999999999999999999999999999864

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=100.00  E-value=5e-95  Score=776.27  Aligned_cols=468  Identities=27%  Similarity=0.408  Sum_probs=430.6

Q ss_pred             ccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhh-hcCCCHHHHHHHH
Q 009109           17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS-RKTKSYEWRMSQI   95 (543)
Q Consensus        17 ~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~-w~~~~~~~R~~iL   95 (543)
                      +...++|||| +|..+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||+. |+.+|.++|.++|
T Consensus         5 ~~~~~~~i~g-~~~~~~~~~~~~~~--------~P~tg~~i~~~-~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL   74 (484)
T cd07144           5 DQPTGLFINN-EFVKSSDGETIKTV--------NPSTGEVIASV-YAAGEEDVDKAVKAARKAFESWWSKVTGEERGELL   74 (484)
T ss_pred             ecCcCcEECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHH
Confidence            4457899999 99987666666666        88899999665 999999999999999999996 8899999999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEE
Q 009109           96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLV  175 (543)
Q Consensus        96 ~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~  175 (543)
                      ++++++|++++++|++++++|+|||..++...|+..+++.+++++++.+++.+.. ..   ...+...++.++|+|||++
T Consensus        75 ~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~-~~---~~~~~~~~~~~~P~GvV~~  150 (484)
T cd07144          75 DKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKT-IP---TSPNKLAYTLHEPYGVCGQ  150 (484)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCce-ec---CCCCceEEEEEecceEEEE
Confidence            9999999999999999999999999877644699999999999999888763321 11   1123446789999999999


Q ss_pred             EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEe
Q 009109          176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYT  252 (543)
Q Consensus       176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ft  252 (543)
                      |+|||||+.++++++++||++||+||+|||+.+|+++..+.+++.++ +|+|+||+|+| +.+.+..|+.|+ +|.|+||
T Consensus       151 I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fT  230 (484)
T cd07144         151 IIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFT  230 (484)
T ss_pred             ECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEE
Confidence            99999999999999999999999999999999999999999999999 99999999999 667899999996 9999999


Q ss_pred             CChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109          253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN  332 (543)
Q Consensus       253 GS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~  332 (543)
                      ||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|++
T Consensus       231 GS~~~g~~i~~~a~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~  309 (484)
T cd07144         231 GSTATGRLVMKAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIM-YNSGQNCTATSRIYVQESIYDKFVEKFVE  309 (484)
T ss_pred             CcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCceEEEcHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHHh-hcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC----CCceeeceEeeCCCCCCccccccc
Q 009109          333 ELKE-FFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE----KQLKIAPTILLDVPDDSTIMKEEI  405 (543)
Q Consensus       333 ~~~~-l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~----~g~~~~Ptvl~~~~~~~~~~~~E~  405 (543)
                      ++++ +++|+|.+ ++++||++++.+++++.++++++.+ ++++++||....    .|+|++|||+.+++++|++++||+
T Consensus       310 ~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~  389 (484)
T cd07144         310 HVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEI  389 (484)
T ss_pred             HHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCC
Confidence            9985 88999976 6799999999999999999999874 679999997642    589999999999999999999999


Q ss_pred             ccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcch
Q 009109          406 FGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG  485 (543)
Q Consensus       406 fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g  485 (543)
                      ||||++|++|+|++|||+++|+++|||++||||+|.+.+.++++++++|+|+||+++.  ..+.+||||+|.||+|+++|
T Consensus       390 FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g  467 (484)
T cd07144         390 FGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSND--SDVGVPFGGFKMSGIGRELG  467 (484)
T ss_pred             CCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCC--CCCCCCcCCcccCcCCCCch
Confidence            9999999999999999999999999999999999999999999999999999998754  45789999999999999999


Q ss_pred             HHHHHHhhhceEEEEe
Q 009109          486 KFSFDAFSHKKAVLYR  501 (543)
Q Consensus       486 ~~~~~~~~~~k~v~~~  501 (543)
                      .+++++||+.|+|+++
T Consensus       468 ~~~l~~~t~~k~v~~~  483 (484)
T cd07144         468 EYGLETYTQTKAVHIN  483 (484)
T ss_pred             HHHHHHhhceEEEEEe
Confidence            9999999999998763

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=100.00  E-value=4.8e-95  Score=774.24  Aligned_cols=461  Identities=24%  Similarity=0.381  Sum_probs=426.0

Q ss_pred             ceeeecceecccCCcccccccccCccccccCC-chhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109           21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSA-TMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        21 ~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~-tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a   99 (543)
                      ++|||| +|+.+.+  .++++        ||. ||++++.+ +.++.+|+++++++|++||+.|++++..+|.++|++++
T Consensus         2 ~~~i~g-~~~~~~~--~~~v~--------~P~~~~~~i~~~-~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a   69 (473)
T cd07097           2 RNYIDG-EWVAGGD--GEENR--------NPSDTSDVVGKY-ARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAG   69 (473)
T ss_pred             CceECC-EEecCCC--CceeE--------CCCCCCeEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence            579999 9998743  23444        888 59999665 99999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW  179 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~  179 (543)
                      ++|++++++|++++++|+|||..+++. |+..+++.+++++...+++.+... .  ....+...++.++|+|||++|+||
T Consensus        70 ~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~-~--~~~~~~~~~~~~~P~GVv~~I~P~  145 (473)
T cd07097          70 DELEARKEELARLLTREEGKTLPEARG-EVTRAGQIFRYYAGEALRLSGETL-P--STRPGVEVETTREPLGVVGLITPW  145 (473)
T ss_pred             HHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccc-c--cCCCCceEEEEEEeeeeEEEEccc
Confidence            999999999999999999999999985 999999999999988877643321 1  111234568999999999999999


Q ss_pred             chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChH
Q 009109          180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPR  256 (543)
Q Consensus       180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~  256 (543)
                      |||+.++++++++||++||+||+|||+.+|.++.++.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|+||||++
T Consensus       146 N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~  225 (473)
T cd07097         146 NFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTA  225 (473)
T ss_pred             ChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHH
Confidence            9999999999999999999999999999999999999999999 99999999999 566889999996 99999999999


Q ss_pred             HHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHh
Q 009109          257 VGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE  336 (543)
Q Consensus       257 ~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~  336 (543)
                      +|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|++++++
T Consensus       226 ~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~  304 (473)
T cd07097         226 VGRRIAAAAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAF-FSTGQRCTASSRLIVTEGIHDRFVEALVERTKA  304 (473)
T ss_pred             HHHHHHHHHhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHH-hccCCCCcCCeeEEEehhHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999 999999999999999999999999999999999


Q ss_pred             hcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC---CCCceeeceEeeCCCCCCcccccccccceee
Q 009109          337 FFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD---EKQLKIAPTILLDVPDDSTIMKEEIFGPLLP  411 (543)
Q Consensus       337 l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~  411 (543)
                      +++|+|.+ .+++|||+++.+++++.++++++++ ++++++||...   ..|+|++|||+.++++++++++||+||||++
T Consensus       305 ~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~  384 (473)
T cd07097         305 LKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAA  384 (473)
T ss_pred             CCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEE
Confidence            99999976 6789999999999999999999875 67999999753   2578999999999999999999999999999


Q ss_pred             eeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC-CcchHHHHH
Q 009109          412 IVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG-SYHGKFSFD  490 (543)
Q Consensus       412 v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~  490 (543)
                      |++|+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+++.+ ..+.+||||+|.||+| +++|.++++
T Consensus       385 v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~-~~~~~PfGG~~~SG~G~~~~g~~~l~  463 (473)
T cd07097         385 VIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAG-VDYHVPFGGRKGSSYGPREQGEAALE  463 (473)
T ss_pred             EeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCC-CCCCCCCCCcccccCcccCCcHHHHH
Confidence            99999999999999999999999999999999999999999999999987653 3468999999999999 899999999


Q ss_pred             HhhhceEEE
Q 009109          491 AFSHKKAVL  499 (543)
Q Consensus       491 ~~~~~k~v~  499 (543)
                      +|++.|+|.
T Consensus       464 ~f~~~k~v~  472 (473)
T cd07097         464 FYTTIKTVY  472 (473)
T ss_pred             HhhceeEEe
Confidence            999999985

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=100.00  E-value=4.6e-95  Score=779.70  Aligned_cols=466  Identities=22%  Similarity=0.325  Sum_probs=432.5

Q ss_pred             cccceeeecceecccCCcccccccccCccccccCCc-hhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 009109           18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ   96 (543)
Q Consensus        18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~   96 (543)
                      -..++|||| +|+.+  +.+++++        ||.| |++++.+ +.++.+|+++++++|++||+.|++++..+|.++|+
T Consensus        31 ~~~~~~i~g-~~~~~--~~~~~v~--------~P~t~~~~i~~~-~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~   98 (512)
T cd07124          31 REYPLVIGG-KEVRT--EEKIESR--------NPADPSEVLGTV-QKATKEEAEAAVQAARAAFPTWRRTPPEERARLLL   98 (512)
T ss_pred             cccceeECC-EEecC--CCeEEeE--------CCCCCCceEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence            345799999 99974  3456655        8887 9999766 99999999999999999999999999999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109           97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI  176 (543)
Q Consensus        97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i  176 (543)
                      +++++|++++++|++++++|+|||..+++. |+..+++.++++++.++++.. .....   ..+...+++++|+|||++|
T Consensus        99 ~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-ev~~~i~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~I  173 (512)
T cd07124          99 RAAALLRRRRFELAAWMVLEVGKNWAEADA-DVAEAIDFLEYYAREMLRLRG-FPVEM---VPGEDNRYVYRPLGVGAVI  173 (512)
T ss_pred             HHHHHHHHCHHHHHHHHHHHcCcCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-ccccC---CCCceeEEEEecceEEEEE
Confidence            999999999999999999999999999985 999999999999999988732 21111   1244678999999999999


Q ss_pred             cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109          177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      +|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+|+| +.+.+..|+.|+ +|.|+|||
T Consensus       174 ~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTG  253 (512)
T cd07124         174 SPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTG  253 (512)
T ss_pred             CCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeC
Confidence            9999999999999999999999999999999999999999999998 99999999999 567889999996 99999999


Q ss_pred             ChHHHHHHHHHHhc------ccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHH
Q 009109          254 SPRVGRIVMAAAAK------HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLI  327 (543)
Q Consensus       254 S~~~g~~i~~~a~~------~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~  327 (543)
                      |+++|+.|++.+++      +++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+
T Consensus       254 s~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~  332 (512)
T cd07124         254 SREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAF-GFQGQKCSACSRVIVHESVYDEFL  332 (512)
T ss_pred             chHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hhCCCccccceEEEEcHHHHHHHH
Confidence            99999999999987      69999999999999999999999999999999999 999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCC---CCceeeceEeeCCCCCCccccc
Q 009109          328 DSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKE  403 (543)
Q Consensus       328 ~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~---~g~~~~Ptvl~~~~~~~~~~~~  403 (543)
                      ++|+++++++++|||.+ .+++||++++.+++++.++|+++..++++++||..+.   .|+|++|||+.+++++|++++|
T Consensus       333 ~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~e  412 (512)
T cd07124         333 ERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQE  412 (512)
T ss_pred             HHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhC
Confidence            99999999999999987 5789999999999999999999888889999997654   6899999999999999999999


Q ss_pred             ccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC-C
Q 009109          404 EIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG-S  482 (543)
Q Consensus       404 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G-~  482 (543)
                      |+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+...+...+.+||||+|.||+| +
T Consensus       413 E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~  492 (512)
T cd07124         413 EIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSK  492 (512)
T ss_pred             CCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCc
Confidence            999999999999999999999999999999999999999999999999999999999876655678999999999999 7


Q ss_pred             cchHHHHHHhhhceEEEEe
Q 009109          483 YHGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       483 ~~g~~~~~~~~~~k~v~~~  501 (543)
                      .+|.+++++||+.|+|.++
T Consensus       493 ~~g~~~~~~~t~~k~v~~~  511 (512)
T cd07124         493 AGGPDYLLQFMQPKTVTEN  511 (512)
T ss_pred             cCcHHHHHHhccEEEEEEe
Confidence            7889999999999999764

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=100.00  E-value=6.8e-95  Score=777.50  Aligned_cols=467  Identities=21%  Similarity=0.356  Sum_probs=429.9

Q ss_pred             cccceeeecceecccCCcccccccccCccccccCC-chhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 009109           18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSA-TMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ   96 (543)
Q Consensus        18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~-tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~   96 (543)
                      ...++|||| +|+.+  +.+++++        ||. ||++++.+ +.++.+|+++|+++|++||+.|+++|..+|.++|+
T Consensus        31 ~~~~~~i~g-~~~~~--~~~~~~~--------~P~~~~~~i~~~-~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~   98 (511)
T TIGR01237        31 KTYPLYING-EYVET--ENKIDSI--------NPCDPSEVVGKV-GKASVEQAEHALQIAKKAFEAWKKTPVRERAGILR   98 (511)
T ss_pred             cccceeECC-EEecC--CCeEEeE--------CCCCCCcEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence            445789999 99975  2345555        888 49999655 99999999999999999999999999999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109           97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI  176 (543)
Q Consensus        97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i  176 (543)
                      +++++|++++++|++++++|+|||+.++.. |+..+++.++++++.++++.+... .  ....+...+++++|+|||++|
T Consensus        99 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVV~~I  174 (511)
T TIGR01237        99 KAAAIMERRRHELNALICLEVGKIIPEADA-EVAEAIDFCEYYAREMERLAGQGV-N--LDIEGETNRYFYQPRGVAVVI  174 (511)
T ss_pred             HHHHHHHHCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccc-c--CCCCCceeEEEEecceeEEEE
Confidence            999999999999999999999999999985 999999999999999888755321 1  112344678899999999999


Q ss_pred             cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109          177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      +|||||+.++++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+|+| +.+.+..|+.|+ +|.|.|||
T Consensus       175 ~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTG  254 (511)
T TIGR01237       175 SPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTG  254 (511)
T ss_pred             CCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEEC
Confidence            9999999999999999999999999999999999999999999998 99999999999 577899999996 99999999


Q ss_pred             ChHHHHHHHHHHh------cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHH
Q 009109          254 SPRVGRIVMAAAA------KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLI  327 (543)
Q Consensus       254 S~~~g~~i~~~a~------~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~  327 (543)
                      |+++|+.|++.++      ++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+
T Consensus       255 s~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~  333 (511)
T TIGR01237       255 SREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAF-GFTGQKCSACSRVVVLSPVYDAVV  333 (511)
T ss_pred             chHHHHHHHHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCcccceEEEEehhHHHHHH
Confidence            9999999999888      589999999999999999999999999999999999 999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccC-CCCceeeceEeeCCCCCCccccccc
Q 009109          328 DSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEI  405 (543)
Q Consensus       328 ~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~  405 (543)
                      ++|+++++++++|+|.+ .+++||++++.+++++.++++++.+++++++||... ..|+|++|||+.+++++|++++||+
T Consensus       334 ~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~  413 (511)
T TIGR01237       334 ERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEI  413 (511)
T ss_pred             HHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCC
Confidence            99999999999999987 678999999999999999999987767899998653 3589999999999999999999999


Q ss_pred             ccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCC-cc
Q 009109          406 FGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGS-YH  484 (543)
Q Consensus       406 fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~  484 (543)
                      ||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..+...+.+||||+|.||+|+ .+
T Consensus       414 FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~  493 (511)
T TIGR01237       414 FGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAG  493 (511)
T ss_pred             cCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCC
Confidence            99999999999999999999999999999999999999999999999999999998765555678999999999996 68


Q ss_pred             hHHHHHHhhhceEEEEe
Q 009109          485 GKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       485 g~~~~~~~~~~k~v~~~  501 (543)
                      |.+++++||+.|+|+.+
T Consensus       494 g~~~l~~~~~~k~v~~~  510 (511)
T TIGR01237       494 GPDYLLQFMQPKTVTEN  510 (511)
T ss_pred             CHHHHHHhcceEEEEEe
Confidence            99999999999999764

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=100.00  E-value=7.2e-95  Score=771.85  Aligned_cols=460  Identities=20%  Similarity=0.285  Sum_probs=419.6

Q ss_pred             eeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHH
Q 009109           23 FIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMI  102 (543)
Q Consensus        23 ~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l  102 (543)
                      |||| +|+.+  +.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|+++|.++|.++|++++++|
T Consensus         2 ~i~g-~~~~~--~~~~~~~--------~P~t~~~i~~~-~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l   69 (474)
T cd07130           2 VYDG-EWGGG--GGVVTSI--------SPANGEPIARV-RQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDAL   69 (474)
T ss_pred             eECC-EEecC--CCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            7999 99985  3455555        88999999765 99999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchh
Q 009109          103 EEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYP  182 (543)
Q Consensus       103 ~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P  182 (543)
                      ++++++|++++++|+|||+.++. .|+..+++.++++++..+.+.+ ....  ....+...+++++|+|||++|+|||||
T Consensus        70 ~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~P~Gvv~~I~p~N~P  145 (474)
T cd07130          70 RKKKEALGKLVSLEMGKILPEGL-GEVQEMIDICDFAVGLSRQLYG-LTIP--SERPGHRMMEQWNPLGVVGVITAFNFP  145 (474)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcC-cccc--CCCCCceEEEEEecceeEEEEccCCCH
Confidence            99999999999999999999997 5999999999999886654432 2111  111234567889999999999999999


Q ss_pred             hhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHH----hhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChH
Q 009109          183 FLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL----EDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPR  256 (543)
Q Consensus       183 ~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l----~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~  256 (543)
                      +.++++++++||++||+||+|||+.+|.++.++++++    .++ +|+|+||+|+|+.+.++.|++|+ +|+|+||||++
T Consensus       146 ~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~  225 (474)
T cd07130         146 VAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTA  225 (474)
T ss_pred             HHHHHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchH
Confidence            9999999999999999999999999999998888775    466 89999999999777899999986 99999999999


Q ss_pred             HHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHh
Q 009109          257 VGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE  336 (543)
Q Consensus       257 ~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~  336 (543)
                      +|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++
T Consensus       226 ~g~~i~~~aa~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~  304 (474)
T cd07130         226 VGRQVGQAVAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAV-GTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQ  304 (474)
T ss_pred             HHHHHHHHHHhcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999 999999999999999999999999999999999


Q ss_pred             hcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccceeeee
Q 009109          337 FFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV  413 (543)
Q Consensus       337 l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~  413 (543)
                      +++|||.+ .+++||++++.+++++.++++++.+ ++++++||... ..|+|++|||+.++++ |++++||+||||++|+
T Consensus       305 l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~  383 (474)
T cd07130         305 VRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVL  383 (474)
T ss_pred             CCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEE
Confidence            99999987 5789999999999999999999875 67999999763 3589999999998766 9999999999999999


Q ss_pred             ccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhh--ccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHH
Q 009109          414 TVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQN--ISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDA  491 (543)
Q Consensus       414 ~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~--l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~  491 (543)
                      +|+|++|||+++|+++|||++||||+|.+++++++++  +++|+|+||+.+. ...+.+||||+|.||+|+++|.+++++
T Consensus       384 ~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~g~~~~~~  462 (474)
T cd07130         384 KFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTS-GAEIGGAFGGEKETGGGRESGSDAWKQ  462 (474)
T ss_pred             EeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCC-CCCCCCCcCccccccCCccchHHHHHH
Confidence            9999999999999999999999999999999999987  9999999998653 345789999999999999999999999


Q ss_pred             hhhceEEEEe
Q 009109          492 FSHKKAVLYR  501 (543)
Q Consensus       492 ~~~~k~v~~~  501 (543)
                      |++.|+++++
T Consensus       463 f~~~k~~~~~  472 (474)
T cd07130         463 YMRRSTCTIN  472 (474)
T ss_pred             HhheEEEEEe
Confidence            9999998764

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-95  Score=777.59  Aligned_cols=476  Identities=24%  Similarity=0.344  Sum_probs=435.3

Q ss_pred             hhhhhcccccccceeeecceecccCCcccccccccCccccccCC-chhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCC
Q 009109            9 FQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSA-TMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKS   87 (543)
Q Consensus         9 ~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~-tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~   87 (543)
                      +++.++..--..++|||| +|+.+  +.+++++        ||. ||++++.+ +.++.+|+++++++|++||+.|++++
T Consensus        26 ~~~~~~~~~~~~~~~i~g-~~~~~--~~~~~~~--------~P~~t~~~i~~~-~~a~~~~v~~av~~A~~A~~~W~~~~   93 (514)
T PRK03137         26 LKKVEKELGQDYPLIIGG-ERITT--EDKIVSI--------NPANKSEVVGRV-SKATKELAEKAMQAALEAFETWKKWS   93 (514)
T ss_pred             HHHHHhhcccccceeECC-EEecC--CCeeEeE--------CCCCCCceEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            333333333445789999 99975  3445555        888 69999766 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEe
Q 009109           88 YEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIIS  167 (543)
Q Consensus        88 ~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (543)
                      ..+|.++|++++++|++++++|++++++|+|||+.+++. |+..+++.++++++.+.++.......   ...+...++++
T Consensus        94 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~g~~~~~~~  169 (514)
T PRK03137         94 PEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEADA-DTAEAIDFLEYYARQMLKLADGKPVE---SRPGEHNRYFY  169 (514)
T ss_pred             HHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccc---CCCCceEEEEE
Confidence            999999999999999999999999999999999999985 99999999999999988875433221   12344678899


Q ss_pred             ecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC
Q 009109          168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK  245 (543)
Q Consensus       168 ~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~  245 (543)
                      +|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+||+++| +.+.+..|+.|+
T Consensus       170 ~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~  249 (514)
T PRK03137        170 IPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHP  249 (514)
T ss_pred             ecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCC
Confidence            9999999999999999999999999999999999999999999999999999999 99999999998 567889999996


Q ss_pred             -CCEEEEeCChHHHHHHHHHHhc------ccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEE
Q 009109          246 -WDKILYTGSPRVGRIVMAAAAK------HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIIT  318 (543)
Q Consensus       246 -v~~v~ftGS~~~g~~i~~~a~~------~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V  318 (543)
                       +|.|+||||+++|+.|++.+++      ++||+++|+|||||+||++|||++.|++.|++++| .|+||.|++++||||
T Consensus       250 ~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V  328 (514)
T PRK03137        250 KTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAF-GFSGQKCSACSRAIV  328 (514)
T ss_pred             CcCEEEEECCcHHHHHHHHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCCCccCeEEEE
Confidence             9999999999999999999986      78999999999999999999999999999999999 999999999999999


Q ss_pred             eCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCC-CCceeeceEeeCCCCC
Q 009109          319 TKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE-KQLKIAPTILLDVPDD  397 (543)
Q Consensus       319 ~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~-~g~~~~Ptvl~~~~~~  397 (543)
                      |+++||+|+++|+++++++++|||.+..++||++++.+++++.++++++..++++++||..+. .|+|++|||+.+++++
T Consensus       329 ~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~Gpli~~~~~~~v~~~v~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~  408 (514)
T PRK03137        329 HEDVYDEVLEKVVELTKELTVGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPK  408 (514)
T ss_pred             eHHHHHHHHHHHHHHHHhCCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCceEEeeEEEeCCCCC
Confidence            999999999999999999999999875599999999999999999999887789999997643 5899999999999999


Q ss_pred             CcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCC
Q 009109          398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGE  477 (543)
Q Consensus       398 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~  477 (543)
                      |++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+.+.+...+.+||||+|.
T Consensus       409 ~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~  488 (514)
T PRK03137        409 ARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNM  488 (514)
T ss_pred             CHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999887665567799999999


Q ss_pred             CCCC-CcchHHHHHHhhhceEEEEe
Q 009109          478 SGMG-SYHGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       478 SG~G-~~~g~~~~~~~~~~k~v~~~  501 (543)
                      ||+| +.+|.+++++||+.|+|...
T Consensus       489 SG~G~~~gg~~~l~~ft~~k~v~~~  513 (514)
T PRK03137        489 SGTDSKAGGPDYLLLFLQAKTVSEM  513 (514)
T ss_pred             ccCCcccCCHHHHHHhceEEEEEEe
Confidence            9999 68899999999999998753

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=100.00  E-value=9.6e-95  Score=775.95  Aligned_cols=469  Identities=22%  Similarity=0.290  Sum_probs=428.9

Q ss_pred             cccceeeecceecccCCcccccccccCccccccCCc-hhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 009109           18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ   96 (543)
Q Consensus        18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~   96 (543)
                      -..++|||| +|+.+ ++.+++++        ||.| |++++.+ +.++.+|+++|+++|++||+.|+++|..+|.++|+
T Consensus        30 ~~~~~~i~G-~~~~~-~~~~~~~~--------nP~t~g~~i~~~-~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~   98 (533)
T TIGR01236        30 IEIPLVIGG-EEVMG-SGERIDQV--------QPHNHQAVLAKA-TNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFL   98 (533)
T ss_pred             eeeceeECC-EEecC-CCCEEEEE--------CCCCCCeEEEEE-eCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence            456789999 99985 55566666        8886 8888666 99999999999999999999999999999999999


Q ss_pred             HHHHHHH-HhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecc-eEEE
Q 009109           97 SIANMIE-EKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPL-GVVL  174 (543)
Q Consensus        97 ~~a~~l~-~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~  174 (543)
                      +++++|+ +++++|++++++|+||++.+++..++..+++.+++++...+++.+....   ....+...++.++|+ |||+
T Consensus        99 k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~---~~~~~~~~~~~~~P~~GVv~  175 (533)
T TIGR01236        99 KAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPS---ESAPGEWNRTDYRPLEGFVY  175 (533)
T ss_pred             HHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCcccc---CCCCCceeEEEEecCCCEEE
Confidence            9999999 5999999999999999999998644999999999999988776543220   111244678999999 9999


Q ss_pred             EEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEE
Q 009109          175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILY  251 (543)
Q Consensus       175 ~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~f  251 (543)
                      +|+|||||+....+++++|| +||+||+|||+.+|.++..+++++.++ +|+|+||+|+| +.+.++.|+.|+ +|.|+|
T Consensus       176 ~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~F  254 (533)
T TIGR01236       176 AISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHF  254 (533)
T ss_pred             EEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEE
Confidence            99999999999999999999 899999999999999999999999999 99999999999 578899999996 999999


Q ss_pred             eCChHHHHHHHHHHhcccCc------EEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHH
Q 009109          252 TGSPRVGRIVMAAAAKHLTP------VILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPK  325 (543)
Q Consensus       252 tGS~~~g~~i~~~a~~~~~~------~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~  325 (543)
                      |||+++|+.|++.++++++|      +++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+
T Consensus       255 TGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~  333 (533)
T TIGR01236       255 TGSTATFKHLWKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAF-EYQGQKCSAASRLYVPHSVWPR  333 (533)
T ss_pred             ECCHHHHHHHHHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hhCCCCCcCCeeEEEchhHHHH
Confidence            99999999999999999874      9999999999999999999999999999999 9999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcC---CEEEECcccC-CCCceeeceEeeCCCCCCcc
Q 009109          326 LIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVS---DKIVYGGQRD-EKQLKIAPTILLDVPDDSTI  400 (543)
Q Consensus       326 f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~---~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~  400 (543)
                      |+++|+++++++++|+|.+ .+++||++++.+++++.++++++.+.   +++++||... ..|+|++|||+.+++++|++
T Consensus       334 f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i  413 (533)
T TIGR01236       334 FKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPL  413 (533)
T ss_pred             HHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChh
Confidence            9999999999999999987 67899999999999999999998763   5999999764 35899999999999999999


Q ss_pred             cccccccceeeeeccCC--HHHHHHHH-HcCCCCcEEEEecCCHHHHHHHHhhcc--ceeEEECCCcccCCCCCCCcccC
Q 009109          401 MKEEIFGPLLPIVTVEK--IEDSFDVI-KSKPKPLAAYFFSDDEQMKKEFVQNIS--AGGIVFNDTIVHTTVSSLPFGGV  475 (543)
Q Consensus       401 ~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~i~t~d~~~~~~~~~~l~--~G~v~iN~~~~~~~~~~~pfGG~  475 (543)
                      ++||+||||++|++|+|  ++|||+++ |+++|||++||||+|.+.+.+++++++  +|+|+||+.+.+...+.+||||+
T Consensus       414 ~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~  493 (533)
T TIGR01236       414 MVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGA  493 (533)
T ss_pred             hcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCc
Confidence            99999999999999998  49999999 889999999999999999999999977  99999998876656678999999


Q ss_pred             CCCCCC-CcchHHHHHHhhhceEEEEec
Q 009109          476 GESGMG-SYHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       476 ~~SG~G-~~~g~~~~~~~~~~k~v~~~~  502 (543)
                      |.||+| +++|.+++++|++.|++....
T Consensus       494 k~SG~G~~~~g~~~l~~f~~~k~v~~~~  521 (533)
T TIGR01236       494 RGSGTNDKAGGPLNLLRWTSARSIKETF  521 (533)
T ss_pred             ccccCCcccCCHHHHHHhcceEEEEEEc
Confidence            999998 999999999999999998764

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=100.00  E-value=1e-94  Score=772.85  Aligned_cols=465  Identities=27%  Similarity=0.390  Sum_probs=429.3

Q ss_pred             cccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhc--CCCHHHHHHHH
Q 009109           18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRK--TKSYEWRMSQI   95 (543)
Q Consensus        18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~--~~~~~~R~~iL   95 (543)
                      +..++|||| +|..+.++.+++++        ||.||++++.+ +.++.+|++.++++|++||+.|+  +++..+|.++|
T Consensus         2 ~~~~~~I~g-~~~~~~~~~~~~~~--------~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L   71 (476)
T cd07091           2 QPTGLFINN-EFVDSVSGKTFPTI--------NPATEEVICQV-AEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLL   71 (476)
T ss_pred             CcccceECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHH
Confidence            347899999 99987677677777        88899999755 99999999999999999999855  99999999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEE
Q 009109           96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLV  175 (543)
Q Consensus        96 ~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~  175 (543)
                      ++++++|++++++|++++++|+|||..++...|+..+++.++++++..++..+.. ..   ...+...+++++|+|||++
T Consensus        72 ~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~-~~---~~~~~~~~~~~~P~GVv~~  147 (476)
T cd07091          72 NKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKT-IP---IDGNFLAYTRREPIGVCGQ  147 (476)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-cc---CCCCceEEEEEeceeEEEE
Confidence            9999999999999999999999999977765699999999999988766543321 11   1134456889999999999


Q ss_pred             EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEe
Q 009109          176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYT  252 (543)
Q Consensus       176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ft  252 (543)
                      |+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+|+| +.+.+..|+.|+ +|.|+||
T Consensus       148 I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fT  227 (476)
T cd07091         148 IIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFT  227 (476)
T ss_pred             ECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEE
Confidence            99999999999999999999999999999999999999999999999 99999999998 667889999985 9999999


Q ss_pred             CChHHHHHHHHHHhc-ccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHH
Q 009109          253 GSPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR  331 (543)
Q Consensus       253 GS~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~  331 (543)
                      ||+++|+.|++.++. +++|+++|+|||||+||++|||++.|++.|++++| .|+||.|+++++||||++++|+|+++|+
T Consensus       228 Gs~~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~~~f~~~L~  306 (476)
T cd07091         228 GSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIF-FNQGQCCCAGSRIFVQESIYDEFVEKFK  306 (476)
T ss_pred             CcHHHHHHHHHHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hccCCCCcCCcEEEEeHHHHHHHHHHHH
Confidence            999999999999987 89999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccc
Q 009109          332 NELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGP  408 (543)
Q Consensus       332 ~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgP  408 (543)
                      ++++++++|+|.+ ++++||++++.+++++.++++++.. ++++++||..+ ..|+|++|||+.+++++|++++||+|||
T Consensus       307 ~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgP  386 (476)
T cd07091         307 ARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGP  386 (476)
T ss_pred             HHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCC
Confidence            9999999999976 6789999999999999999998875 56999999764 4689999999999999999999999999


Q ss_pred             eeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHH
Q 009109          409 LLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS  488 (543)
Q Consensus       409 vl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~  488 (543)
                      |++|++|+|++||++++|+++|||++||||+|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|
T Consensus       387 vl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~  464 (476)
T cd07091         387 VVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNV--FDAAVPFGGFKQSGFGRELGEEG  464 (476)
T ss_pred             eEEEeecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHH
Confidence            9999999999999999999999999999999999999999999999999998653  56789999999999999999999


Q ss_pred             HHHhhhceEEE
Q 009109          489 FDAFSHKKAVL  499 (543)
Q Consensus       489 ~~~~~~~k~v~  499 (543)
                      +++||+.|++.
T Consensus       465 ~~~f~~~k~~~  475 (476)
T cd07091         465 LEEYTQVKAVT  475 (476)
T ss_pred             HHHhhceeEEe
Confidence            99999999985

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=100.00  E-value=1.5e-94  Score=775.25  Aligned_cols=466  Identities=18%  Similarity=0.266  Sum_probs=425.8

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCC-chhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSA-TMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS   97 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~-tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~   97 (543)
                      ..++|||| +|+.+  +.+++++        ||. ||++++.+ +.++.+|+++||++|++||+.|++++..+|.++|++
T Consensus        32 ~~~~~i~G-~~~~~--~~~~~v~--------~P~~tg~~l~~~-~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~   99 (522)
T cd07123          32 EIPLVIGG-KEVRT--GNTGKQV--------MPHDHAHVLATY-HYADAALVEKAIEAALEARKEWARMPFEDRAAIFLK   99 (522)
T ss_pred             ccCeeECC-EEcCC--CCeEEEE--------CCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence            35689999 99875  4456665        888 59999765 999999999999999999999999999999999999


Q ss_pred             HHHHHHH-hHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecc-eEEEE
Q 009109           98 IANMIEE-KEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPL-GVVLV  175 (543)
Q Consensus        98 ~a~~l~~-~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~  175 (543)
                      ++++|++ ++++|++++++|+|||..++...|+..+++.+++++....++.......   ...+...+++++|+ |||++
T Consensus       100 ~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~P~~GVv~~  176 (522)
T cd07123         100 AADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLS---SPAGVWNRLEYRPLEGFVYA  176 (522)
T ss_pred             HHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccC---CCCCceeEEEEecCCceEEE
Confidence            9999996 8999999999999999999876689999999999999888765433211   11234578899998 99999


Q ss_pred             EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEe
Q 009109          176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYT  252 (543)
Q Consensus       176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ft  252 (543)
                      |+|||||+.+..+++++|| +||+||+|||+.+|+++..+++++.++ +|+|+||+|+| +.+.+..|+.|+ +|+|+||
T Consensus       177 I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FT  255 (522)
T cd07123         177 VSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFT  255 (522)
T ss_pred             ECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEE
Confidence            9999999999999999999 699999999999999999999999999 99999999999 556899999986 9999999


Q ss_pred             CChHHHHHHHHHHhcccC------cEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHH
Q 009109          253 GSPRVGRIVMAAAAKHLT------PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKL  326 (543)
Q Consensus       253 GS~~~g~~i~~~a~~~~~------~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f  326 (543)
                      ||+++|+.|++.++++++      |+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|
T Consensus       256 GS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f-~~aGQ~C~a~~rv~V~~~i~d~f  334 (522)
T cd07123         256 GSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAF-EYQGQKCSAASRAYVPESLWPEV  334 (522)
T ss_pred             CCHHHHHHHHHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHH
Confidence            999999999999999887      99999999999999999999999999999999 99999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc--CCEEEECcccC-CCCceeeceEeeCCCCCCcccc
Q 009109          327 IDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV--SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMK  402 (543)
Q Consensus       327 ~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~--~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~  402 (543)
                      +++|+++++++++|+|.+ .+++||++++.+++++.++++++.+  ++++++||..+ ..|+|++|||+.+++++|++++
T Consensus       335 ~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~  414 (522)
T cd07123         335 KERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMT  414 (522)
T ss_pred             HHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhh
Confidence            999999999999999987 6789999999999999999999865  56999999764 3589999999999999999999


Q ss_pred             cccccceeeeeccCC--HHHHHHHHHcCC-CCcEEEEecCCHHHHHHHHhhc--cceeEEECCCcccCCCCCCCcccCCC
Q 009109          403 EEIFGPLLPIVTVEK--IEDSFDVIKSKP-KPLAAYFFSDDEQMKKEFVQNI--SAGGIVFNDTIVHTTVSSLPFGGVGE  477 (543)
Q Consensus       403 ~E~fgPvl~v~~~~~--~~eai~~~n~~~-~gl~a~i~t~d~~~~~~~~~~l--~~G~v~iN~~~~~~~~~~~pfGG~~~  477 (543)
                      ||+||||++|++|+|  ++|||+++|++. |||++||||+|.+.+.++++++  ++|.|+||+.+.+...+.+||||+|.
T Consensus       415 eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~  494 (522)
T cd07123         415 EEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARA  494 (522)
T ss_pred             cCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchh
Confidence            999999999999984  799999999985 9999999999999999999996  59999999987655567899999999


Q ss_pred             CCCC-CcchHHHHHHhhhceEEEEe
Q 009109          478 SGMG-SYHGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       478 SG~G-~~~g~~~~~~~~~~k~v~~~  501 (543)
                      ||+| +++|.+++++|++.|++...
T Consensus       495 SG~gg~~~g~~~l~~~~~~k~~~~~  519 (522)
T cd07123         495 SGTNDKAGSPLNLLRWVSPRTIKET  519 (522)
T ss_pred             cCCCcccCCHHHHHHhcceEEEEEe
Confidence            9996 99999999999999998764

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=100.00  E-value=2e-94  Score=771.83  Aligned_cols=462  Identities=25%  Similarity=0.372  Sum_probs=428.4

Q ss_pred             eeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHH
Q 009109           23 FIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQSIAN  100 (543)
Q Consensus        23 ~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~--~w~~~~~~~R~~iL~~~a~  100 (543)
                      |||| +|..+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||+  .|++++..+|.++|+++++
T Consensus         1 ~i~g-~~~~~~~~~~~~~~--------~P~tg~~i~~~-~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~   70 (482)
T cd07119           1 YIDG-EWVEAASGKTRDII--------NPANGEVIATV-PEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIAD   70 (482)
T ss_pred             CCCC-EEecCCCCCeEEee--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHH
Confidence            7999 99987677677776        88899998666 89999999999999999997  5999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCc
Q 009109          101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN  180 (543)
Q Consensus       101 ~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N  180 (543)
                      +|++++++|++++++|+|||..+++. |+..+++.++++++..++..... ..   ...+...+++++|+|||++|+|||
T Consensus        71 ~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~P~GvV~~I~p~N  145 (482)
T cd07119          71 KIREDAEELARLETLNTGKTLRESEI-DIDDVANCFRYYAGLATKETGEV-YD---VPPHVISRTVREPVGVCGLITPWN  145 (482)
T ss_pred             HHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcc-cc---CCCCceEEEEEeeeeeEEEEcCCc
Confidence            99999999999999999999999985 99999999999999887643322 11   113445789999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHH
Q 009109          181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRV  257 (543)
Q Consensus       181 ~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~  257 (543)
                      ||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+| +.+.+..|++|+ +|+|+||||+++
T Consensus       146 ~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~  225 (482)
T cd07119         146 YPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTAT  225 (482)
T ss_pred             hHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHH
Confidence            999999999999999999999999999999999999999999 99999999998 455889999995 999999999999


Q ss_pred             HHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhh
Q 009109          258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF  337 (543)
Q Consensus       258 g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l  337 (543)
                      |+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||+++||+|+++|+++++++
T Consensus       226 g~~i~~~aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~  304 (482)
T cd07119         226 GRSIMRAAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVF-FNAGQVCSAGSRLLVEESIHDKFVAALAERAKKI  304 (482)
T ss_pred             HHHHHHHHHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999 9999999999999999999999999999999999


Q ss_pred             cCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC-----CCceeeceEeeCCCCCCccccccccccee
Q 009109          338 FGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE-----KQLKIAPTILLDVPDDSTIMKEEIFGPLL  410 (543)
Q Consensus       338 ~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~-----~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl  410 (543)
                      ++|+|.+ ++++||++++.++++++++++++.+ ++++++||....     .|+|++|||+.+++++|++++||+||||+
T Consensus       305 ~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl  384 (482)
T cd07119         305 KLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVL  384 (482)
T ss_pred             CCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceE
Confidence            9999976 6789999999999999999998865 679999997532     58999999999999999999999999999


Q ss_pred             eeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHH
Q 009109          411 PIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFD  490 (543)
Q Consensus       411 ~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~  490 (543)
                      +|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|++|++
T Consensus       385 ~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~  462 (482)
T cd07119         385 TVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHP--YFAEAPWGGYKQSGIGRELGPTGLE  462 (482)
T ss_pred             EEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHH
Confidence            99999999999999999999999999999999999999999999999998643  5678999999999999999999999


Q ss_pred             HhhhceEEEEec
Q 009109          491 AFSHKKAVLYRS  502 (543)
Q Consensus       491 ~~~~~k~v~~~~  502 (543)
                      +||+.|+++++.
T Consensus       463 ~~t~~k~v~~~~  474 (482)
T cd07119         463 EYQETKHININL  474 (482)
T ss_pred             HHhceEEEEEec
Confidence            999999998764

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=100.00  E-value=1.6e-94  Score=769.42  Aligned_cols=456  Identities=25%  Similarity=0.415  Sum_probs=426.2

Q ss_pred             eeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHH
Q 009109           22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANM  101 (543)
Q Consensus        22 ~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~  101 (543)
                      +|||| +|+.+.++++++++        ||.||++++.+ +.++.+|+++++++|++||+.|+++|..+|.++|++++++
T Consensus         1 ~~i~g-~~~~~~~~~~~~~~--------~P~~~~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~   70 (466)
T cd07138           1 FYIDG-AWVAPAGTETIDVI--------NPATEEVIGTV-PLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEA   70 (466)
T ss_pred             CeECC-EeecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence            58999 99998777777777        88899999766 9999999999999999999999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCch
Q 009109          102 IEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNY  181 (543)
Q Consensus       102 l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~  181 (543)
                      |++++++|++++++|+|||..++...|+..+++.++++++.++.+....        .....+++++|+|||++|+||||
T Consensus        71 l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~p~N~  142 (466)
T cd07138          71 YEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEE--------RRGNSLVVREPIGVCGLITPWNW  142 (466)
T ss_pred             HHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccc--------cCceEEEEEeecceEEEECCCcc
Confidence            9999999999999999999998875699999999999998887653322        12345778999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHH
Q 009109          182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVG  258 (543)
Q Consensus       182 P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g  258 (543)
                      |+.++++++++||++||+||+|||+.+|.++.++.+++.++ +|+|+||+++| +.+.+..|+.|+ +|.|+||||+++|
T Consensus       143 P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g  222 (466)
T cd07138         143 PLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAG  222 (466)
T ss_pred             HHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHH
Confidence            99999999999999999999999999999999999999999 99999999998 556889999996 9999999999999


Q ss_pred             HHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhc
Q 009109          259 RIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF  338 (543)
Q Consensus       259 ~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~  338 (543)
                      +.|++.++.+++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++
T Consensus       223 ~~i~~~aa~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~  301 (466)
T cd07138         223 KRVAEAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACF-ANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYV  301 (466)
T ss_pred             HHHHHHHhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHH-hccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999 99999999999999999999999999999999999


Q ss_pred             CCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC----CCCceeeceEeeCCCCCCcccccccccceeee
Q 009109          339 GKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI  412 (543)
Q Consensus       339 ~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v  412 (543)
                      +|||.+ ++++||++++.+++++.++++++.+ ++++++||...    ..|+|++|||+.+++++|++++||+||||++|
T Consensus       302 ~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v  381 (466)
T cd07138         302 VGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSI  381 (466)
T ss_pred             CCCCCCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEE
Confidence            999987 7799999999999999999998865 67999998642    25899999999999999999999999999999


Q ss_pred             eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHh
Q 009109          413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF  492 (543)
Q Consensus       413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~  492 (543)
                      ++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|+|+||+..   ..+.+||||+|.||+|+++|.+++++|
T Consensus       382 ~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~~  458 (466)
T cd07138         382 IPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA---FNPGAPFGGYKQSGNGREWGRYGLEEF  458 (466)
T ss_pred             eccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC---CCCCCCcCCcccccCCccchHHHHHHh
Confidence            99999999999999999999999999999999999999999999999853   467899999999999999999999999


Q ss_pred             hhceEEE
Q 009109          493 SHKKAVL  499 (543)
Q Consensus       493 ~~~k~v~  499 (543)
                      |+.|+|+
T Consensus       459 ~~~k~v~  465 (466)
T cd07138         459 LEVKSIQ  465 (466)
T ss_pred             cceeEEe
Confidence            9999875

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=100.00  E-value=2.1e-94  Score=769.99  Aligned_cols=461  Identities=23%  Similarity=0.353  Sum_probs=428.2

Q ss_pred             eeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHHHHHH
Q 009109           22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS--RKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        22 ~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~--w~~~~~~~R~~iL~~~a   99 (543)
                      +|||| +|..+.++++++++        ||.||++++.+ +.++.+|++.++++|++||+.  |+++|..+|.++|++++
T Consensus         1 ~~i~g-~~~~~~~~~~~~~~--------~P~tg~~i~~~-~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a   70 (471)
T cd07139           1 LFIGG-RWVAPSGSETIDVV--------SPATEEVVGRV-PEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLA   70 (471)
T ss_pred             CeECC-EeecCCCCCeEEeE--------CCCCCCEeEEE-eCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHH
Confidence            58999 99987666667766        88899999766 999999999999999999985  99999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW  179 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~  179 (543)
                      ++|++++++|++++++|+|||..++...|+..+++.++++++..+++...+....   ..+...+++++|+|||++|+||
T Consensus        71 ~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~  147 (471)
T cd07139          71 DALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPG---SGGGHVLVRREPVGVVAAIVPW  147 (471)
T ss_pred             HHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEEeccEEEEEcCC
Confidence            9999999999999999999999887666999999999999998877644332111   1244568899999999999999


Q ss_pred             chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHH
Q 009109          180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRV  257 (543)
Q Consensus       180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~  257 (543)
                      |||+.+.++++++||++||+||+|||+.+|+++..+.+++.++ +|+|++|+++|+.+.+..|+.|+ +|.|+||||+.+
T Consensus       148 N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~  227 (471)
T cd07139         148 NAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAA  227 (471)
T ss_pred             chHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHH
Confidence            9999999999999999999999999999999999999999999 99999999999777889999996 999999999999


Q ss_pred             HHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhh
Q 009109          258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF  337 (543)
Q Consensus       258 g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l  337 (543)
                      |+.|++.++++++|+++|+||+||+||++|||++.|++.|++++| +|+||.|+++++||||++++|+|+++|+++++++
T Consensus       228 g~~v~~~~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~  306 (471)
T cd07139         228 GRRIAAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASL-MNNGQVCVALTRILVPRSRYDEVVEALAAAVAAL  306 (471)
T ss_pred             HHHHHHHHHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999999999 9999999999999999999999999999999999


Q ss_pred             cCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC---CCceeeceEeeCCCCCCcccccccccceeee
Q 009109          338 FGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPLLPI  412 (543)
Q Consensus       338 ~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v  412 (543)
                      ++|+|.+ .+++||++++.+++++.++++++.. ++++++||..+.   .|+|++|||+.+++++|++++||+||||++|
T Consensus       307 ~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v  386 (471)
T cd07139         307 KVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSV  386 (471)
T ss_pred             CcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEE
Confidence            9999987 6789999999999999999998765 679999997543   4889999999999999999999999999999


Q ss_pred             eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHh
Q 009109          413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF  492 (543)
Q Consensus       413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~  492 (543)
                      ++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++.   ..+.+||||+|.||+|+++|.+|+++|
T Consensus       387 ~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~f  463 (471)
T cd07139         387 IPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR---LDFGAPFGGFKQSGIGREGGPEGLDAY  463 (471)
T ss_pred             eecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC---CCCCCCCCCcccccCCccchHHHHHHH
Confidence            99999999999999999999999999999999999999999999999865   357899999999999999999999999


Q ss_pred             hhceEEE
Q 009109          493 SHKKAVL  499 (543)
Q Consensus       493 ~~~k~v~  499 (543)
                      |+.|+|+
T Consensus       464 t~~k~i~  470 (471)
T cd07139         464 LETKSIY  470 (471)
T ss_pred             hceeEEe
Confidence            9999985

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-94  Score=768.39  Aligned_cols=467  Identities=21%  Similarity=0.312  Sum_probs=426.9

Q ss_pred             cccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 009109           18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS   97 (543)
Q Consensus        18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~   97 (543)
                      ...++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||++|+.++..+|.++|++
T Consensus        14 ~~~~~~i~G-~~~~~~~~~~~~~~--------~P~t~~~i~~~-~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~   83 (496)
T PLN00412         14 DVYKYYADG-EWRTSSSGKSVAIT--------NPSTRKTQYKV-QACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHK   83 (496)
T ss_pred             cccCceECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence            456899999 99987666666666        88899999554 999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCc-ccc-cCc--CCCCcceEEeecceEE
Q 009109           98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEK-AKT-SLT--TYPSSAEIISEPLGVV  173 (543)
Q Consensus        98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~-~~~-~~~--~~~~~~~~~~~P~GVv  173 (543)
                      +++.|++++++|++++++|+|||..++. .|+..+++.+++++..+.++..... ... ...  ..+...+++++|+|||
T Consensus        84 ~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  162 (496)
T PLN00412         84 AAAILKEHKAPIAECLVKEIAKPAKDAV-TEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVV  162 (496)
T ss_pred             HHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEE
Confidence            9999999999999999999999999997 5999999999999988777654321 111 000  1122457889999999


Q ss_pred             EEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEE
Q 009109          174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKIL  250 (543)
Q Consensus       174 ~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~  250 (543)
                      ++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.
T Consensus       163 ~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~  242 (496)
T PLN00412        163 LAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCIS  242 (496)
T ss_pred             EEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEE
Confidence            9999999999999999999999999999999999999999999999998 99999999998 467888999996 99999


Q ss_pred             EeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHH
Q 009109          251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL  330 (543)
Q Consensus       251 ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l  330 (543)
                      |||| ++|+.|++.++  ++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|
T Consensus       243 ftGs-~~g~~v~~~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l  318 (496)
T PLN00412        243 FTGG-DTGIAISKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGF-SYSGQRCTAVKVVLVMESVADALVEKV  318 (496)
T ss_pred             EeCh-HHHHHHHHHhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHH-hcCCCCCccCeEEEEcHHHHHHHHHHH
Confidence            9999 99999999875  7999999999999999999999999999999999 999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccce
Q 009109          331 RNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPL  409 (543)
Q Consensus       331 ~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv  409 (543)
                      +++++++++|+|.+++++||++++.+++++.++++++.. ++++++||..  .|+|+.|||+.+++++|++++||+||||
T Consensus       319 ~~~~~~~~~g~p~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~FgPv  396 (496)
T PLN00412        319 NAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR--EGNLIWPLLLDNVRPDMRIAWEEPFGPV  396 (496)
T ss_pred             HHHHHhCccCCCcccCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCeEEecEEEeCCCCCCHHHhCcCCCCe
Confidence            999999999999888899999999999999999998865 6788887743  6899999999999999999999999999


Q ss_pred             eeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHH
Q 009109          410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF  489 (543)
Q Consensus       410 l~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~  489 (543)
                      ++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ...+.+||||+|.||+|+++|.+|+
T Consensus       397 l~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~  475 (496)
T PLN00412        397 LPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPA-RGPDHFPFQGLKDSGIGSQGITNSI  475 (496)
T ss_pred             EEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCC-CCCCCCCCCCccccccCCCChHHHH
Confidence            999999999999999999999999999999999999999999999999998864 3446799999999999999999999


Q ss_pred             HHhhhceEEEEec
Q 009109          490 DAFSHKKAVLYRS  502 (543)
Q Consensus       490 ~~~~~~k~v~~~~  502 (543)
                      ++||+.|+++++.
T Consensus       476 ~~ft~~k~i~~~~  488 (496)
T PLN00412        476 NMMTKVKSTVINL  488 (496)
T ss_pred             HHhcceEEEEEec
Confidence            9999999998753

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=100.00  E-value=2.8e-94  Score=767.78  Aligned_cols=457  Identities=26%  Similarity=0.390  Sum_probs=423.9

Q ss_pred             eeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHH
Q 009109           23 FIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMI  102 (543)
Q Consensus        23 ~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l  102 (543)
                      |||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|+.+|.++|.++|++++++|
T Consensus         1 ~i~g-~~~~~~~~~~~~~~--------nP~t~~~i~~~-~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l   70 (467)
T TIGR01804         1 FIDG-EWVEASAGETREII--------NPANQEVIATV-AEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELI   70 (467)
T ss_pred             CCCC-EEecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            7999 99988777777777        88899999766 99999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchh
Q 009109          103 EEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYP  182 (543)
Q Consensus       103 ~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P  182 (543)
                      ++++++|++++++|+|||..++...|+..+++.++++++..++..+.. ...   ..+...+++++|+|||++|+|||||
T Consensus        71 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P  146 (467)
T TIGR01804        71 RERNEELAKLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEI-IPL---PIPSFSYTIREPLGVCVGIGAWNYP  146 (467)
T ss_pred             HHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCcc-ccC---CCCceEEEEEeeeeEEEEECCCchH
Confidence            999999999999999999999955699999999999998877643221 111   1124567899999999999999999


Q ss_pred             hhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCC-hHHHHHHHhCC-CCEEEEeCChHHHH
Q 009109          183 FLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPRVGR  259 (543)
Q Consensus       183 ~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~-~~~~~~L~~~~-v~~v~ftGS~~~g~  259 (543)
                      +.+.++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|+ .+.+..|+.|+ +|+|+||||+++|+
T Consensus       147 ~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~  226 (467)
T TIGR01804       147 LQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGK  226 (467)
T ss_pred             HHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHH
Confidence            9999999999999999999999999999999999999999 999999999984 78899999997 99999999999999


Q ss_pred             HHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcC
Q 009109          260 IVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG  339 (543)
Q Consensus       260 ~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~  339 (543)
                      .|++.+++++||+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++||+|+++|+++++++++
T Consensus       227 ~v~~~a~~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~  305 (467)
T TIGR01804       227 KIMAAAADHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNF-FSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKL  305 (467)
T ss_pred             HHHHHHHhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHH-HhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999999999999999999 999999999999999999999999999999999999


Q ss_pred             CCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC-----CCceeeceEeeCCCCCCcccccccccceeee
Q 009109          340 KNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE-----KQLKIAPTILLDVPDDSTIMKEEIFGPLLPI  412 (543)
Q Consensus       340 g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~-----~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v  412 (543)
                      |+|.+ ++++||++++.+.+++.++++++.. ++++++||....     .|+|++|||+.+++++|++++||+||||++|
T Consensus       306 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v  385 (467)
T TIGR01804       306 GDGFDEATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTV  385 (467)
T ss_pred             CCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEE
Confidence            99976 6799999999999999999998865 679999997532     4889999999999999999999999999999


Q ss_pred             eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHh
Q 009109          413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF  492 (543)
Q Consensus       413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~  492 (543)
                      ++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++|
T Consensus       386 ~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~  463 (467)
T TIGR01804       386 LTFSSEDEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHP--YPAEAPWGGYKQSGIGRENGKAGLAEY  463 (467)
T ss_pred             EecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCccCCCChHHHHHHH
Confidence            999999999999999999999999999999999999999999999998754  457789999999999999999999999


Q ss_pred             hhce
Q 009109          493 SHKK  496 (543)
Q Consensus       493 ~~~k  496 (543)
                      |+.|
T Consensus       464 ~~~~  467 (467)
T TIGR01804       464 TEVK  467 (467)
T ss_pred             hccC
Confidence            9875

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=100.00  E-value=6.3e-94  Score=754.39  Aligned_cols=446  Identities=51%  Similarity=0.891  Sum_probs=413.6

Q ss_pred             HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCC
Q 009109           71 SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE  150 (543)
Q Consensus        71 ~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~  150 (543)
                      +.+++|++||+.|+++++.+|.++|++++++|+++.++|++++++|+|||+.++...|+..+++.++++++.++.+.+.+
T Consensus         2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (449)
T cd07136           2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK   81 (449)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            56899999999999999999999999999999999999999999999999999976699999999999999988876553


Q ss_pred             cccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEe
Q 009109          151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRV  230 (543)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~v  230 (543)
                      .........+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~alP~gv~~~  161 (449)
T cd07136          82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEETFDEEYVAV  161 (449)
T ss_pred             ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHhCCCCEEEE
Confidence            22211111244578899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCcc
Q 009109          231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQAC  310 (543)
Q Consensus       231 v~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C  310 (543)
                      |+|+.+.+..|+.|++|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|
T Consensus       162 v~g~~~~~~~L~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~-~~~GQ~C  240 (449)
T cd07136         162 VEGGVEENQELLDQKFDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKF-LNAGQTC  240 (449)
T ss_pred             EeCChHHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHH-cccCCcc
Confidence            999778889999778999999999999999999999999999999999999999999999999999999999 9999999


Q ss_pred             ccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCCceeeceE
Q 009109          311 IGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTI  390 (543)
Q Consensus       311 ~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~~Ptv  390 (543)
                      ++++|||||+++||+|+++|+++++++++|+|.+.+++||++++.+.+++.++++++    ++++||..+.+|+|++|||
T Consensus       241 ~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a----~~~~gG~~~~~g~~~~Ptv  316 (449)
T cd07136         241 VAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNG----KIVFGGNTDRETLYIEPTI  316 (449)
T ss_pred             cCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcc----eEEECCCcCCCCCEEeeEE
Confidence            999999999999999999999999999999998888999999999999999999864    8999997655689999999


Q ss_pred             eeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCC
Q 009109          391 LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSL  470 (543)
Q Consensus       391 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~  470 (543)
                      +.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||+...+...+.+
T Consensus       317 l~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~  396 (449)
T cd07136         317 LDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYL  396 (449)
T ss_pred             EecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987654455789


Q ss_pred             CcccCCCCCCCCcchHHHHHHhhhceEEEEecCCCCCCCcCCCCChHHHHH
Q 009109          471 PFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKL  521 (543)
Q Consensus       471 pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~~p~~~~~~~~  521 (543)
                      ||||+|.||+|+++|.+++++||+.|+|+++..+.+..++|||++.++.++
T Consensus       397 PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~~~~~~~~~~  447 (449)
T cd07136         397 PFGGVGNSGMGSYHGKYSFDTFSHKKSILKKSTWFDLPLRYPPYKGKKKKL  447 (449)
T ss_pred             CccCcCcccCCcccCHHHHHHhccceEEEEcCCcCCccccCCCCchHHHhh
Confidence            999999999999999999999999999998755667889999998665553

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=100.00  E-value=9.9e-94  Score=762.56  Aligned_cols=458  Identities=26%  Similarity=0.417  Sum_probs=421.5

Q ss_pred             ceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q 009109           27 YTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKE  106 (543)
Q Consensus        27 ~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~  106 (543)
                      -+|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++|++.|++++..+|.++|++++++|++++
T Consensus         1 g~~~~~~~~~~~~~~--------~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~   71 (465)
T cd07151           1 GEWRDGTSERTIDVL--------NPYTGETLAEI-PAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERR   71 (465)
T ss_pred             CCceeCCCCCeEeeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhH
Confidence            078877666666666        88899999755 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhh
Q 009109          107 EEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLS  186 (543)
Q Consensus       107 ~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~  186 (543)
                      ++|++++++|+||+..++.. |+..+++.+++++.....+.. ....  ....+...+++++|+|||++|+|||||+.+.
T Consensus        72 ~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~  147 (465)
T cd07151          72 DEIVEWLIRESGSTRIKANI-EWGAAMAITREAATFPLRMEG-RILP--SDVPGKENRVYREPLGVVGVISPWNFPLHLS  147 (465)
T ss_pred             HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcC-cccc--CCCCCceeEEEEecceEEEEECCCChHHHHH
Confidence            99999999999999999985 999999999999987665422 1111  1112445688999999999999999999999


Q ss_pred             hhHHHHHhhcCCEEEEeCCCCChHHH-HHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHH
Q 009109          187 LDPVIGAIAAGNAVVLKPSEIAPATS-SLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVM  262 (543)
Q Consensus       187 ~~~~~~ALaaGN~VVlKps~~~p~~~-~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~  262 (543)
                      ++++++||++||+||+|||+.+|.++ .++.+++.++ +|+|+||+|+| +.+.+..|+.|+ +|.|+||||+++|+.|+
T Consensus       148 ~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~  227 (465)
T cd07151         148 MRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIG  227 (465)
T ss_pred             HHHHHHHHHcCCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence            99999999999999999999999996 7899999999 99999999998 567889999997 99999999999999999


Q ss_pred             HHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCC
Q 009109          263 AAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNP  342 (543)
Q Consensus       263 ~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~  342 (543)
                      +.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       228 ~~aa~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p  306 (465)
T cd07151         228 ELAGRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKF-LHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDP  306 (465)
T ss_pred             HHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCC
Confidence            9999999999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             CC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHH
Q 009109          343 ME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIED  420 (543)
Q Consensus       343 ~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e  420 (543)
                      .+ .+++||++++.+++++.++++++.. ++++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus       307 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e  384 (465)
T cd07151         307 SDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA--EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEE  384 (465)
T ss_pred             CCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCc--CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHH
Confidence            76 6799999999999999999998865 6799999865  588999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEE
Q 009109          421 SFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY  500 (543)
Q Consensus       421 ai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~  500 (543)
                      ||+++|+++|||++||||+|.++++++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus       385 ai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~  463 (465)
T cd07151         385 ALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVN-DEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISV  463 (465)
T ss_pred             HHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCC-CCCCCCCCCcccccCCcCChHHHHHHhhceEEEEe
Confidence            99999999999999999999999999999999999999998753 45779999999999999999999999999999876


Q ss_pred             e
Q 009109          501 R  501 (543)
Q Consensus       501 ~  501 (543)
                      .
T Consensus       464 ~  464 (465)
T cd07151         464 Q  464 (465)
T ss_pred             c
Confidence            3

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=100.00  E-value=1.6e-93  Score=764.51  Aligned_cols=464  Identities=23%  Similarity=0.375  Sum_probs=427.3

Q ss_pred             eeeecceecccCCcccccccccCccccccCCc-hhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 009109           22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN  100 (543)
Q Consensus        22 ~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~  100 (543)
                      +|||| +|+.+.++.+++++        ||.| +++++.+ +.++.+|+++++++|++||+.|++++..+|.++|+++++
T Consensus         1 ~~i~g-~~~~~~~~~~~~~~--------~P~t~~~~~~~~-~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~   70 (478)
T cd07131           1 NYIGG-EWVDSASGETFDSR--------NPADLEEVVGTF-PLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAE   70 (478)
T ss_pred             CcCCC-EeecCCCCCeEEEE--------CCCCCCeEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence            58999 99987777777777        7777 5677554 889999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCc
Q 009109          101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN  180 (543)
Q Consensus       101 ~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N  180 (543)
                      +|++++++|++++++|+|||..+++. |+..+++.+++++...+..... ....  ...+...+++++|+|||++|+|||
T Consensus        71 ~l~~~~~ela~~~~~e~Gk~~~~~~~-ev~~~i~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~P~GVv~~I~p~N  146 (478)
T cd07131          71 LLKKRKEELARLVTREMGKPLAEGRG-DVQEAIDMAQYAAGEGRRLFGE-TVPS--ELPNKDAMTRRQPIGVVALITPWN  146 (478)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCc-cccc--CCCCceEEEEeeceeEEEEECCcC
Confidence            99999999999999999999999984 9999999999999887764322 1111  112335689999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHH
Q 009109          181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRV  257 (543)
Q Consensus       181 ~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~  257 (543)
                      ||+.++++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+++| +.+.+..|+.|+ +|.|+||||+++
T Consensus       147 ~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~  226 (478)
T cd07131         147 FPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEV  226 (478)
T ss_pred             cHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHH
Confidence            999999999999999999999999999999999999999999 99999999999 556889999996 999999999999


Q ss_pred             HHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhh
Q 009109          258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF  337 (543)
Q Consensus       258 g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l  337 (543)
                      |+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++||+|+++|+++++++
T Consensus       227 g~~i~~~aa~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~  305 (478)
T cd07131         227 GERIGETCARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAF-GTTGQRCTATSRLIVHESVYDEFLKRFVERAKRL  305 (478)
T ss_pred             HHHHHHHHhhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999 9999999999999999999999999999999999


Q ss_pred             cCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCCCCccccccccccee
Q 009109          338 FGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLL  410 (543)
Q Consensus       338 ~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl  410 (543)
                      ++|+|.+ .+++||++++.+++++.++++++.+ ++++++||...     ..|+|++|||+.+++++|+++++|+||||+
T Consensus       306 ~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl  385 (478)
T cd07131         306 RVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVV  385 (478)
T ss_pred             CCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeE
Confidence            9999987 6789999999999999999999875 67999998652     358999999999999999999999999999


Q ss_pred             eeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC-CcchHHHH
Q 009109          411 PIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG-SYHGKFSF  489 (543)
Q Consensus       411 ~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~  489 (543)
                      +|++|+|++|||+++|+++|||++||||+|.++++++++++++|+|+||+++.+ ..+.+||||+|.||+| +.+|.+|+
T Consensus       386 ~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~~g~~~~  464 (478)
T cd07131         386 ALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIG-AEVHLPFGGVKKSGNGHREAGTTAL  464 (478)
T ss_pred             EEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCC-CCCCCCCCCcccccCCCcCCcHHHH
Confidence            999999999999999999999999999999999999999999999999998753 4578999999999999 77899999


Q ss_pred             HHhhhceEEEEe
Q 009109          490 DAFSHKKAVLYR  501 (543)
Q Consensus       490 ~~~~~~k~v~~~  501 (543)
                      ++||+.|+|+++
T Consensus       465 ~~f~~~k~i~~~  476 (478)
T cd07131         465 DAFTEWKAVYVD  476 (478)
T ss_pred             HHhhheEEEEEe
Confidence            999999999864

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=1.5e-93  Score=763.48  Aligned_cols=462  Identities=22%  Similarity=0.336  Sum_probs=422.4

Q ss_pred             ceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 009109           21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN  100 (543)
Q Consensus        21 ~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~  100 (543)
                      .+|||| +|+.+ ++.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|++++..+|.++|+++++
T Consensus         2 ~~~i~g-~~~~~-~~~~~~~~--------~P~t~~~i~~~-~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~   70 (487)
T PRK09457          2 TLWING-DWIAG-QGEAFESR--------NPVSGEVLWQG-NDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAA   70 (487)
T ss_pred             CceECC-EEecC-CCCEEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence            379999 99876 34455555        88999999665 999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCc
Q 009109          101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN  180 (543)
Q Consensus       101 ~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N  180 (543)
                      +|+++.++|++++++|+|||..+++. |+..+++.++++++.+.++.+... .   ...+...+++++|+|||++|+|||
T Consensus        71 ~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~P~GVv~~I~PwN  145 (487)
T PRK09457         71 LLEENKEELAEVIARETGKPLWEAAT-EVTAMINKIAISIQAYHERTGEKR-S---EMADGAAVLRHRPHGVVAVFGPYN  145 (487)
T ss_pred             HHHhHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcee-c---cCCCceeEEEEeccEEEEEECCCc
Confidence            99999999999999999999999984 999999999999988877654322 1   122345688999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHH
Q 009109          181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVG  258 (543)
Q Consensus       181 ~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g  258 (543)
                      ||+.++++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+|+|+.+.+..|+.|+ +|.|+||||+++|
T Consensus       146 ~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G  225 (487)
T PRK09457        146 FPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTG  225 (487)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHH
Confidence            999999999999999999999999999999999999999999 99999999999878899999996 9999999999999


Q ss_pred             HHHHHHHhcc-cCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcH-HHHHHHHHHHHHh
Q 009109          259 RIVMAAAAKH-LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFA-PKLIDSLRNELKE  336 (543)
Q Consensus       259 ~~i~~~a~~~-~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~l~~~~~~  336 (543)
                      +.|++.++++ .+++++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++| |+|+++|++++++
T Consensus       226 ~~i~~~aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~  304 (487)
T PRK09457        226 YLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAF-ISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKR  304 (487)
T ss_pred             HHHHHHHhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHh-hccCCCCCCCceEEEeccccHHHHHHHHHHHHhc
Confidence            9999987755 5788999999999999999999999999999999 99999999999999999998 9999999999999


Q ss_pred             hcCCCCC-C-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccceeee
Q 009109          337 FFGKNPM-E-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI  412 (543)
Q Consensus       337 l~~g~~~-~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v  412 (543)
                      +++|||. + .+++||++++.+++++.++++++.+ ++++++||.. +..|+|++|||+ +++++|++++||+||||++|
T Consensus       305 ~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V  383 (487)
T PRK09457        305 LTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQV  383 (487)
T ss_pred             CcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEE
Confidence            9999995 3 6789999999999999999999875 6799988754 345799999999 79999999999999999999


Q ss_pred             eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHh
Q 009109          413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF  492 (543)
Q Consensus       413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~  492 (543)
                      ++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+...+ ..+.+||||+|.||+|+++|..+ .+|
T Consensus       384 ~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~-~~~  461 (487)
T PRK09457        384 VRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTG-ASSAAPFGGVGASGNHRPSAYYA-ADY  461 (487)
T ss_pred             EEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCC-CCCCCCCCCcccccCCCCCchhH-hhh
Confidence            9999999999999999999999999999999999999999999999988654 45679999999999999999555 559


Q ss_pred             hhceEEEEec
Q 009109          493 SHKKAVLYRS  502 (543)
Q Consensus       493 ~~~k~v~~~~  502 (543)
                      ++.|+++.+.
T Consensus       462 ~~~k~~~~~~  471 (487)
T PRK09457        462 CAYPMASLES  471 (487)
T ss_pred             eeeeEEEEec
Confidence            9999988874

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=100.00  E-value=9.2e-94  Score=761.65  Aligned_cols=454  Identities=26%  Similarity=0.382  Sum_probs=422.5

Q ss_pred             ccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 009109           17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ   96 (543)
Q Consensus        17 ~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~   96 (543)
                      ..+.++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|++++..+|.++|+
T Consensus        19 ~~~~~~~i~g-~~~~~~~~~~~~~~--------nP~t~~~i~~~-~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~   88 (480)
T cd07111          19 DRSFGHFING-KWVKPENRKSFPTI--------NPATGEVLASV-LQAEEEDVDAAVAAARTAFESWSALPGHVRARHLY   88 (480)
T ss_pred             cccccceECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence            3567889999 99987666667766        88899999766 99999999999999999999999999999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109           97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI  176 (543)
Q Consensus        97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i  176 (543)
                      +++++|++++++|++++++|+|||+.+++..|+..+++.+++++...+...              .....++|+|||++|
T Consensus        89 ~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~--------------~~~~~~~P~GVV~~I  154 (480)
T cd07111          89 RIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLD--------------TELAGWKPVGVVGQI  154 (480)
T ss_pred             HHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------CCcccceecceEEEE
Confidence            999999999999999999999999999975699999999988876554321              123457999999999


Q ss_pred             cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCC
Q 009109          177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGS  254 (543)
Q Consensus       177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS  254 (543)
                      +|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+|+|+.+.+..|+.|+ +|.|+||||
T Consensus       155 ~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs  234 (480)
T cd07111         155 VPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGS  234 (480)
T ss_pred             CCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECC
Confidence            9999999999999999999999999999999999999999999999 99999999999667889999997 999999999


Q ss_pred             hHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH
Q 009109          255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL  334 (543)
Q Consensus       255 ~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~  334 (543)
                      +.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|++++
T Consensus       235 ~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f-~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~  313 (480)
T cd07111         235 TEVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIW-FNQGQVCCAGSRLLVQESVAEELIRKLKERM  313 (480)
T ss_pred             HHHHHHHHHHHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHH-hcCCCcCcCCceEEEcHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999 9999999999999999999999999999999


Q ss_pred             HhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccceee
Q 009109          335 KEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP  411 (543)
Q Consensus       335 ~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~  411 (543)
                      +++++|+|.+ .+++||++++.+++++.++++++.. ++++++||.. +..|+|++|||+.+++++|++++||+||||++
T Consensus       314 ~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~  393 (480)
T cd07111         314 SHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLV  393 (480)
T ss_pred             HhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeE
Confidence            9999999987 6789999999999999999999865 5788888864 44689999999999999999999999999999


Q ss_pred             eeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHH
Q 009109          412 IVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDA  491 (543)
Q Consensus       412 v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~  491 (543)
                      |++|+|++|||+++|+++|||++||||+|.+.+.++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++
T Consensus       394 v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~  471 (480)
T cd07111         394 VLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNL--FDAAAGFGGYRESGFGREGGKEGLYE  471 (480)
T ss_pred             eecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCC--CCCCCCcCCcccccCCccchHHHHHH
Confidence            9999999999999999999999999999999999999999999999998764  45678999999999999999999999


Q ss_pred             hhhceE
Q 009109          492 FSHKKA  497 (543)
Q Consensus       492 ~~~~k~  497 (543)
                      ||+.|+
T Consensus       472 ~~~~k~  477 (480)
T cd07111         472 YLRPSW  477 (480)
T ss_pred             HhhccC
Confidence            999885

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=100.00  E-value=1.5e-93  Score=765.96  Aligned_cols=466  Identities=21%  Similarity=0.335  Sum_probs=430.4

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCC-chhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSA-TMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS   97 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~-tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~   97 (543)
                      ..++||+| +|+.+  +.+++++        +|. ||++++.+ +.++.+|+++++++|++||+.|+.+|.++|.++|++
T Consensus        18 ~~~~~i~g-~~~~~--~~~~~~~--------~P~~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~   85 (500)
T cd07083          18 AYPLVIGG-EWVDT--KERMVSV--------SPFAPSEVVGTT-AKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLK   85 (500)
T ss_pred             cccceECC-EEecC--CCceEee--------CCCCCCcEEEEE-cCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence            35689999 99875  4455555        775 69999766 999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEc
Q 009109           98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS  177 (543)
Q Consensus        98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~  177 (543)
                      ++++|++++++|++++++|+|||+.++. .|+..+++.++++++.+.++........  ...+...+++++|+|||++|+
T Consensus        86 ~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~  162 (500)
T cd07083          86 AADLLRRRRRELIATLTYEVGKNWVEAI-DDVAEAIDFIRYYARAALRLRYPAVEVV--PYPGEDNESFYVGLGAGVVIS  162 (500)
T ss_pred             HHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccC--CCCCceEEEEEeccceEEEEc
Confidence            9999999999999999999999999986 5999999999999999988765432111  113446788999999999999


Q ss_pred             CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCC
Q 009109          178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS  254 (543)
Q Consensus       178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS  254 (543)
                      |||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+|+||+|+| +.+.+..|+.|+ +|.|+||||
T Consensus       163 P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs  242 (500)
T cd07083         163 PWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGS  242 (500)
T ss_pred             CCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECc
Confidence            999999999999999999999999999999999999999999999 99999999999 677899999986 999999999


Q ss_pred             hHHHHHHHHHHhccc------CcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHH
Q 009109          255 PRVGRIVMAAAAKHL------TPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLID  328 (543)
Q Consensus       255 ~~~g~~i~~~a~~~~------~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~  328 (543)
                      +++|+.|.+.+++++      +|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|++
T Consensus       243 ~~~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~  321 (500)
T cd07083         243 LETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAF-GFQGQKCSAASRLILTQGAYEPVLE  321 (500)
T ss_pred             HHHHHHHHHHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hhcCCCCCCCeeEEEcHHHHHHHHH
Confidence            999999999999886      999999999999999999999999999999999 9999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCC-CCceeeceEeeCCCCCCcccccccc
Q 009109          329 SLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIF  406 (543)
Q Consensus       329 ~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~f  406 (543)
                      +|+++++++++|||.+ .+++||++++.+++++.++++++..++++++||..+. .|+|++|||+.+++++|++++||+|
T Consensus       322 ~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~F  401 (500)
T cd07083         322 RLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIF  401 (500)
T ss_pred             HHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCC
Confidence            9999999999999987 5799999999999999999999887779999997643 5899999999999999999999999


Q ss_pred             cceeeeeccC--CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC-Cc
Q 009109          407 GPLLPIVTVE--KIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG-SY  483 (543)
Q Consensus       407 gPvl~v~~~~--~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~  483 (543)
                      |||++|++|+  |++|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.+.+...+.+||||+|.||+| +.
T Consensus       402 gPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~  481 (500)
T cd07083         402 GPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKT  481 (500)
T ss_pred             CceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcc
Confidence            9999999999  99999999999999999999999999999999999999999999877655567999999999999 67


Q ss_pred             chHHHHHHhhhceEEEE
Q 009109          484 HGKFSFDAFSHKKAVLY  500 (543)
Q Consensus       484 ~g~~~~~~~~~~k~v~~  500 (543)
                      +|.+++++|++.|+++.
T Consensus       482 ~g~~~l~~~~~~k~~~~  498 (500)
T cd07083         482 GGPHYLRRFLEMKAVAE  498 (500)
T ss_pred             cCHHHHHHhhheeEEEE
Confidence            88999999999999875

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=100.00  E-value=1.5e-93  Score=763.41  Aligned_cols=460  Identities=23%  Similarity=0.385  Sum_probs=426.1

Q ss_pred             eeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHH
Q 009109           23 FIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMI  102 (543)
Q Consensus        23 ~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l  102 (543)
                      |||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++|++.|+++|..+|.++|++++++|
T Consensus         1 ~i~g-~~~~~~~~~~~~~~--------~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l   70 (468)
T cd07088           1 YING-EFVPSSSGETIDVL--------NPATGEVVATV-PAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLI   70 (468)
T ss_pred             CCCC-EEecCCCCCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence            7999 99987777777777        88899999766 99999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchh
Q 009109          103 EEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYP  182 (543)
Q Consensus       103 ~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P  182 (543)
                      +++.++|++++++|+|||..+++. |+..+++.+++++..+++..+.. .  .....+...+.+++|+|||++|+|||||
T Consensus        71 ~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~a~~~~~~~-~--~~~~~~~~~~~~~~P~Gvv~~I~p~N~P  146 (468)
T cd07088          71 RENADELAKLIVEEQGKTLSLARV-EVEFTADYIDYMAEWARRIEGEI-I--PSDRPNENIFIFKVPIGVVAGILPWNFP  146 (468)
T ss_pred             HHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCcc-c--cCccccceeEEEEecceeEEEEccCchH
Confidence            999999999999999999999985 99999999999998776643321 1  1111244678899999999999999999


Q ss_pred             hhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCC-hHHHHHHHhCC-CCEEEEeCChHHHH
Q 009109          183 FLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPRVGR  259 (543)
Q Consensus       183 ~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~-~~~~~~L~~~~-v~~v~ftGS~~~g~  259 (543)
                      +.+.++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+++|+ .+.+..|+.|+ +|.|.||||+++|+
T Consensus       147 ~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~  226 (468)
T cd07088         147 FFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQ  226 (468)
T ss_pred             HHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHH
Confidence            9999999999999999999999999999999999999999 999999999994 55788999986 99999999999999


Q ss_pred             HHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcC
Q 009109          260 IVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG  339 (543)
Q Consensus       260 ~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~  339 (543)
                      .|++.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++++
T Consensus       227 ~i~~~aa~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~  305 (468)
T cd07088         227 KIMEAAAENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRI-INCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKV  305 (468)
T ss_pred             HHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHh-cccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999999999999999999 999999999999999999999999999999999999


Q ss_pred             CCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC--CCceeeceEeeCCCCCCcccccccccceeeeecc
Q 009109          340 KNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE--KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV  415 (543)
Q Consensus       340 g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~  415 (543)
                      |+|.+ ++++||++++.+++++.++++++.. ++++++||..+.  .|+|++|||+.+++++|++++||+||||++|++|
T Consensus       306 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~  385 (468)
T cd07088         306 GDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKF  385 (468)
T ss_pred             CCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEec
Confidence            99987 6789999999999999999999865 679999997643  6899999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 009109          416 EKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHK  495 (543)
Q Consensus       416 ~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~  495 (543)
                      +|++|||+++|+++|||++||||+|.+.++++++++++|+|+||++..+  .+..||||+|.||+|+++|++++++||+.
T Consensus       386 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~k~SG~G~~~g~~~l~~~t~~  463 (468)
T cd07088         386 SSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFE--AMQGFHAGWKKSGLGGADGKHGLEEYLQT  463 (468)
T ss_pred             CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccccCCcCchHHHHHHHhce
Confidence            9999999999999999999999999999999999999999999988753  34569999999999999999999999999


Q ss_pred             eEEE
Q 009109          496 KAVL  499 (543)
Q Consensus       496 k~v~  499 (543)
                      |+|.
T Consensus       464 k~v~  467 (468)
T cd07088         464 KVVY  467 (468)
T ss_pred             eEEe
Confidence            9985

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=3.9e-93  Score=765.35  Aligned_cols=477  Identities=21%  Similarity=0.351  Sum_probs=432.7

Q ss_pred             cccchhhhhhcccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhh
Q 009109            4 PSVRAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSR   83 (543)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w   83 (543)
                      |++.++.|.      +-+-.|.| .|  +.++++++++        ||.||++++.+ +.++.+|+++++++|++|++.|
T Consensus         9 ~~~~~~~~~------~~~~~~~~-~~--~~~~~~~~v~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w   70 (524)
T PRK09407          9 PAPSALTFE------RLRRLTAR-VD--GAAGPTREVT--------APFTGEPLATV-PVSTAADVEAAFARARAAQRAW   70 (524)
T ss_pred             CCcccccHH------HHHHHHhh-cC--CCCCCEEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHH
Confidence            455666662      23445666 33  4456666666        88899999766 9999999999999999999999


Q ss_pred             cCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcc
Q 009109           84 KTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSA  163 (543)
Q Consensus        84 ~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (543)
                      ++++..+|.++|++++++|+++.++|++++++|+|||..++. .|+..++..+++++..++++++++...... ......
T Consensus        71 ~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~  148 (524)
T PRK09407         71 AATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARRHAF-EEVLDVALTARYYARRAPKLLAPRRRAGAL-PVLTKT  148 (524)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccccC-CCCceE
Confidence            999999999999999999999999999999999999999987 599999999999999998887654322111 112457


Q ss_pred             eEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHH
Q 009109          164 EIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSAL  241 (543)
Q Consensus       164 ~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L  241 (543)
                      +++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+|+| +.+.+..|
T Consensus       149 ~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L  228 (524)
T PRK09407        149 TELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTAL  228 (524)
T ss_pred             EEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHH
Confidence            88999999999999999999999999999999999999999999999999999999999 99999999999 56788889


Q ss_pred             HhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCC
Q 009109          242 LEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD  321 (543)
Q Consensus       242 ~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~  321 (543)
                      ++| +|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||++
T Consensus       229 ~~~-~d~V~fTGs~~~g~~v~~~aa~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~  306 (524)
T PRK09407        229 VDN-ADYLMFTGSTATGRVLAEQAGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACF-SNAGQLCISIERIYVHES  306 (524)
T ss_pred             Hhc-CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHH
Confidence            876 799999999999999999999999999999999999999999999999999999999 999999999999999999


Q ss_pred             cHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC--CCCceeeceEeeCCCCC
Q 009109          322 FAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD--EKQLKIAPTILLDVPDD  397 (543)
Q Consensus       322 i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~--~~g~~~~Ptvl~~~~~~  397 (543)
                      +||+|+++|+++++++++|+|.+ ++++||++++.+++++.++++++.+ ++++++||...  ..|+|++|||+.+++++
T Consensus       307 v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~  386 (524)
T PRK09407        307 IYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPD  386 (524)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCC
Confidence            99999999999999999999976 6789999999999999999999865 67999999743  25799999999999999


Q ss_pred             CcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCccc-CCCCCCCcccCC
Q 009109          398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVH-TTVSSLPFGGVG  476 (543)
Q Consensus       398 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~~~pfGG~~  476 (543)
                      |++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+...+ ...+.+||||+|
T Consensus       387 ~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k  466 (524)
T PRK09407        387 MELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMK  466 (524)
T ss_pred             ChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999999999999987653 245678999999


Q ss_pred             CCCCCCcchHHHHHHhhhceEEEEec
Q 009109          477 ESGMGSYHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       477 ~SG~G~~~g~~~~~~~~~~k~v~~~~  502 (543)
                      .||+|+++|.+++++||+.|+|.+++
T Consensus       467 ~SG~G~~~g~~~l~~ft~~k~v~~~~  492 (524)
T PRK09407        467 DSGLGRRHGAEGLLKYTESQTIATQR  492 (524)
T ss_pred             ccccCccchHHHHHHhCCeEEEEEcc
Confidence            99999999999999999999998764

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=100.00  E-value=4.5e-93  Score=756.30  Aligned_cols=444  Identities=22%  Similarity=0.332  Sum_probs=413.1

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE  128 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~E  128 (543)
                      +||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+|||..++. .|
T Consensus         2 ~~p~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~e   79 (456)
T cd07107           2 INPATGQVLARV-PAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAML-GD   79 (456)
T ss_pred             cCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HH
Confidence            489999999776 9999999999999999999999999999999999999999999999999999999999999987 59


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCC
Q 009109          129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA  208 (543)
Q Consensus       129 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~  208 (543)
                      +..+++.++++++..+. +.+.....   ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus        80 v~~~~~~l~~~a~~~~~-~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~  155 (456)
T cd07107          80 VMVAAALLDYFAGLVTE-LKGETIPV---GGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQA  155 (456)
T ss_pred             HHHHHHHHHHHHHHHHH-hCCccccC---CCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCC
Confidence            99999999999976654 33332211   123456889999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhhcCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcC
Q 009109          209 PATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS  286 (543)
Q Consensus       209 p~~~~~l~~~l~~alP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~  286 (543)
                      |.++..+++++.+++|+|+||+++| +.+.++.|++|+ +|+|+||||+++|+.|++.++++++|+++|+|||||+||++
T Consensus       156 p~~~~~l~~~~~~~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~  235 (456)
T cd07107         156 PLSALRLAELAREVLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFP  235 (456)
T ss_pred             hHHHHHHHHHHHHhCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECC
Confidence            9999999999999999999999998 455789999997 99999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHhh-cccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHH
Q 009109          287 TINLQVTTRRIIAGK-WMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLL  364 (543)
Q Consensus       287 daDl~~aa~~iv~~~-~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i  364 (543)
                      |||++.|++.+++++ | .|+||.|++++|||||+++||+|+++|+++++++++|+|.+ ++++||++++.+++++.++|
T Consensus       236 dadl~~Aa~~i~~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i  314 (456)
T cd07107         236 DADPEAAADAAVAGMNF-TWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYI  314 (456)
T ss_pred             CCCHHHHHHHHHHhchh-hcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHH
Confidence            999999999999995 8 89999999999999999999999999999999999999987 67899999999999999999


Q ss_pred             Hhhhc-CCEEEECcccC-----CCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEec
Q 009109          365 DEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFS  438 (543)
Q Consensus       365 ~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t  438 (543)
                      +++.+ ++++++||...     ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus       315 ~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft  394 (456)
T cd07107         315 DSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWT  394 (456)
T ss_pred             HHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEEC
Confidence            98865 67999999652     2589999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEe
Q 009109          439 DDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       439 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~  501 (543)
                      +|.++++++++++++|+|+||++..  ..+.+||||+|+||+|+++|++++++||+.|+|+++
T Consensus       395 ~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~  455 (456)
T cd07107         395 NDISQAHRTARRVEAGYVWINGSSR--HFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR  455 (456)
T ss_pred             CCHHHHHHHHHhcCcCEEEECCCCC--CCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence            9999999999999999999998875  357899999999999999999999999999998763

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=100.00  E-value=7.2e-93  Score=757.70  Aligned_cols=464  Identities=21%  Similarity=0.324  Sum_probs=427.0

Q ss_pred             ceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 009109           21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN  100 (543)
Q Consensus        21 ~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~  100 (543)
                      ++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|++++..+|.++|+++++
T Consensus         2 ~~~i~g-~~~~~~~~~~~~~~--------~P~t~~~i~~~-~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~   71 (477)
T TIGR01722         2 NHWIGG-KFAEGASGTYIPVT--------NPATNEVTTKV-AFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQA   71 (477)
T ss_pred             ceeECC-EEecCCCCCeEeee--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence            579999 99987666666666        88899999766 999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCc
Q 009109          101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN  180 (543)
Q Consensus       101 ~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N  180 (543)
                      +|++++++|+++++.|+|||+.++. .|+..+++.+++++.......+.. ..  ....+...+++++|+|||++|+|||
T Consensus        72 ~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~P~Gvv~~I~p~N  147 (477)
T TIGR01722        72 LLKEHRDEIAELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKGET-ST--QVATRVDVYSIRQPLGVCAGITPFN  147 (477)
T ss_pred             HHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cc--cCCCCceEEEEEcccceEEEEccCC
Confidence            9999999999999999999999998 599999999999987766543221 11  1112334678999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHH
Q 009109          181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVG  258 (543)
Q Consensus       181 ~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g  258 (543)
                      ||+.+.++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+|+|+.+.+..|++|+ +|.|+||||+++|
T Consensus       148 ~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g  227 (477)
T TIGR01722       148 FPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIG  227 (477)
T ss_pred             hHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHH
Confidence            999999999999999999999999999999999999999999 99999999999777889999996 9999999999999


Q ss_pred             HHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhc
Q 009109          259 RIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF  338 (543)
Q Consensus       259 ~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~  338 (543)
                      +.|.+.++.++||+++|+||+||+||++|||++.|++.+++++| .|+||.|++++|||||+++ ++|+++|++++++++
T Consensus       228 ~~v~~~a~~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f-~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~  305 (477)
T TIGR01722       228 RYIHTTGSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAY-GAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIR  305 (477)
T ss_pred             HHHHHHHHhcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999 9999999999999999999 999999999999999


Q ss_pred             CCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCCCCcccccccccceee
Q 009109          339 GKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLP  411 (543)
Q Consensus       339 ~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~  411 (543)
                      +|+|.+ .+++||++++.+++++.++++++.+ ++++++||...     ..|+|++|||+.+++++|.+++||+||||++
T Consensus       306 ~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~  385 (477)
T TIGR01722       306 IGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLC  385 (477)
T ss_pred             CCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEE
Confidence            999976 6789999999999999999999865 67999998652     2589999999999999999999999999999


Q ss_pred             eeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC--CcchHHHH
Q 009109          412 IVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG--SYHGKFSF  489 (543)
Q Consensus       412 v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~  489 (543)
                      |++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||+... ...+.+||||+|.||+|  +++|.+++
T Consensus       386 V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~~pfgG~k~SG~G~~~~~g~~~l  464 (477)
T TIGR01722       386 VLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIP-VPLPYFSFTGWKDSFFGDHHIYGKQGT  464 (477)
T ss_pred             EEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCC-CCCCCCCCCccccccCCCCccChHHHH
Confidence            9999999999999999999999999999999999999999999999998654 34578999999999999  57899999


Q ss_pred             HHhhhceEEEEe
Q 009109          490 DAFSHKKAVLYR  501 (543)
Q Consensus       490 ~~~~~~k~v~~~  501 (543)
                      ++||+.|++++.
T Consensus       465 ~~~~~~k~i~~~  476 (477)
T TIGR01722       465 HFYTRGKTVTTR  476 (477)
T ss_pred             HHhcCeeEEEEe
Confidence            999999999864

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=100.00  E-value=3.4e-93  Score=758.86  Aligned_cols=462  Identities=16%  Similarity=0.226  Sum_probs=411.5

Q ss_pred             ceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHH-hhhhcCCCHHHHHHHHHHHH
Q 009109           21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN-YNSRKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        21 ~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A-~~~w~~~~~~~R~~iL~~~a   99 (543)
                      ++|||| +|+.+. +.+++++        ||.||++++.+ +.++ +|+++||++|++| |+.|+++++.+|+++|++++
T Consensus         2 ~~~I~g-~~~~~~-~~~~~~~--------nP~tg~~~~~~-~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a   69 (513)
T cd07128           2 QSYVAG-QWHAGT-GDGRTLH--------DAVTGEVVARV-SSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALA   69 (513)
T ss_pred             ceeECC-EEEcCC-CCEEEeE--------CCCCCCEEEEE-cCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHH
Confidence            689999 999874 5566666        88899999777 6665 7999999999997 79999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCccc----c-cCcCCC-CcceEEeec-ceE
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAK----T-SLTTYP-SSAEIISEP-LGV  172 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~----~-~~~~~~-~~~~~~~~P-~GV  172 (543)
                      ++|++++++|+++ +.|+|||+.+++. |+..+++.++++++.++++..+....    . +....+ ...+++++| +||
T Consensus        70 ~~l~~~~~~la~l-~~e~Gkp~~ea~~-Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GV  147 (513)
T cd07128          70 KYLMERKEDLYAL-SAATGATRRDSWI-DIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGV  147 (513)
T ss_pred             HHHHHHHHHHHHH-HHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccE
Confidence            9999999999996 9999999999984 99999999999999988775421110    0 001111 135678999 599


Q ss_pred             EEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh--cCCCceEeecCC-hHHHHHHHhCCCCEE
Q 009109          173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY--VDNSAVRVVEGA-VAETSALLEQKWDKI  249 (543)
Q Consensus       173 v~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a--lP~gvv~vv~g~-~~~~~~L~~~~v~~v  249 (543)
                      |++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++.++  +|+|+||+|+|+ .+.+..|  ..+|+|
T Consensus       148 v~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l--~~~d~v  225 (513)
T cd07128         148 AVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL--GEQDVV  225 (513)
T ss_pred             EEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc--CCCCEE
Confidence            99999999999999999999999999999999999999999999999997  799999999984 3333332  148999


Q ss_pred             EEeCChHHHHHHHHHH--hcccCcEEEecCCCCcEEEcCCCC-----HHHHHHHHHHhhcccCCCCccccCCEEEEeCCc
Q 009109          250 LYTGSPRVGRIVMAAA--AKHLTPVILELGGKSPAVVDSTIN-----LQVTTRRIIAGKWMANNGQACIGVDYIITTKDF  322 (543)
Q Consensus       250 ~ftGS~~~g~~i~~~a--~~~~~~~~lelgG~~p~iV~~daD-----l~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i  322 (543)
                      +||||+++|+.|++.+  +++++|+++|||||||+||++|||     ++.+++.+++++| .|+||.|++++|+|||+++
T Consensus       226 ~fTGS~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f-~~aGQ~C~a~~rv~V~~~i  304 (513)
T cd07128         226 AFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMT-VKAGQKCTAIRRAFVPEAR  304 (513)
T ss_pred             EEECCHHHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHH-HhcCCcccCCceEEEehHH
Confidence            9999999999999985  488999999999999999999999     9999999999999 9999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccC--------CCCceeeceEeeC
Q 009109          323 APKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD--------EKQLKIAPTILLD  393 (543)
Q Consensus       323 ~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~--------~~g~~~~Ptvl~~  393 (543)
                      ||+|+++|+++++++++|||.+ ++++|||+++.+++++.++|+++.+++++++||...        ..|+|++|||+.+
T Consensus       305 ~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~  384 (513)
T cd07128         305 VDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLC  384 (513)
T ss_pred             HHHHHHHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEec
Confidence            9999999999999999999976 678999999999999999999987779999999652        3589999999998


Q ss_pred             CCCC--CcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc--ceeEEECCCcc------
Q 009109          394 VPDD--STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNIS--AGGIVFNDTIV------  463 (543)
Q Consensus       394 ~~~~--~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~--~G~v~iN~~~~------  463 (543)
                      ++++  |.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++++++  +|+|+||+..+      
T Consensus       385 v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~  464 (513)
T cd07128         385 DDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTG  464 (513)
T ss_pred             cCCcccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCcccccccc
Confidence            8874  8999999999999999999999999999999999999999999999999999997  99999998642      


Q ss_pred             -cCCCCCCCcccCCCCCCCCcc-hHHHHHHhhhceEEE
Q 009109          464 -HTTVSSLPFGGVGESGMGSYH-GKFSFDAFSHKKAVL  499 (543)
Q Consensus       464 -~~~~~~~pfGG~~~SG~G~~~-g~~~~~~~~~~k~v~  499 (543)
                       ....+.+||||+|.||+|+++ |.+++++|++.|+|.
T Consensus       465 ~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~  502 (513)
T cd07128         465 HGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ  502 (513)
T ss_pred             ccCCCCCCCCCCcccCCCCcccccHHHHHHhheeeeee
Confidence             123467899999999999994 799999999999975

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=100.00  E-value=4e-93  Score=754.44  Aligned_cols=440  Identities=25%  Similarity=0.377  Sum_probs=410.5

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE  128 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~E  128 (543)
                      +||.||++++.+ +.++.+|++.++++|++|++.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |
T Consensus         2 ~~P~tg~~i~~~-~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-e   79 (448)
T TIGR01780         2 YNPATGEIIGTV-PDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKG-E   79 (448)
T ss_pred             cCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-H
Confidence            489999999776 99999999999999999999999999999999999999999999999999999999999999984 9


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCC
Q 009109          129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA  208 (543)
Q Consensus       129 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~  208 (543)
                      +..+++.+++++...+++.+... .  ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus        80 v~~~~~~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~  156 (448)
T TIGR01780        80 ILYAASFLEWFAEEAKRVYGDTI-P--SPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQT  156 (448)
T ss_pred             HHHHHHHHHHHHHHHHHhcCccc-c--CCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccc
Confidence            99999999999887776543211 1  11223455778999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhh-cCCCceEeecCC--hHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEE
Q 009109          209 PATSSLLAKLLEDY-VDNSAVRVVEGA--VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV  284 (543)
Q Consensus       209 p~~~~~l~~~l~~a-lP~gvv~vv~g~--~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV  284 (543)
                      |+++..+++++.++ +|+|+||+++|+  .+.++.|++|+ +|.|+||||+.+|+.|++.++.+++|+++|+|||||+||
T Consensus       157 p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV  236 (448)
T TIGR01780       157 PLSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIV  236 (448)
T ss_pred             hHHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEE
Confidence            99999999999999 999999999985  56789999996 999999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHH
Q 009109          285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASL  363 (543)
Q Consensus       285 ~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~  363 (543)
                      ++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|.+ ++++||++++.+++++.++
T Consensus       237 ~~dadl~~aa~~iv~~~f-~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~  315 (448)
T TIGR01780       237 FDDADIDQAVEGAMASKF-RNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKH  315 (448)
T ss_pred             CCCCCHHHHHHHHHHHHH-HhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999 99999999999999999999999999999999999999976 6799999999999999999


Q ss_pred             HHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCH
Q 009109          364 LDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE  441 (543)
Q Consensus       364 i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~  441 (543)
                      ++++.+ ++++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.
T Consensus       316 i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~  395 (448)
T TIGR01780       316 IADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDL  395 (448)
T ss_pred             HHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCH
Confidence            999875 67999999764 3589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhce
Q 009109          442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKK  496 (543)
Q Consensus       442 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k  496 (543)
                      +.++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|
T Consensus       396 ~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k  448 (448)
T TIGR01780       396 ATIWRVAEALEYGMVGINTGLI--SNVVAPFGGVKQSGLGREGSKYGIEEYLETK  448 (448)
T ss_pred             HHHHHHHHhCCccEEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence            9999999999999999998764  4567899999999999999999999999875

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=100.00  E-value=9.7e-93  Score=753.31  Aligned_cols=445  Identities=22%  Similarity=0.382  Sum_probs=414.8

Q ss_pred             cCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHH
Q 009109           50 CSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEI  129 (543)
Q Consensus        50 ~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev  129 (543)
                      ||.||++++.+ +.++.+|+++++++|++||+.|++++.++|.++|++++++|++++++|++++++|+||+..++. .|+
T Consensus         2 ~P~tg~~i~~~-~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev   79 (454)
T cd07101           2 APFTGEPLGEL-PQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAF-EEV   79 (454)
T ss_pred             cCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHH
Confidence            79999999755 9999999999999999999999999999999999999999999999999999999999999997 599


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCCh
Q 009109          130 SMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAP  209 (543)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p  209 (543)
                      ..+++.+++++..+.++.++........ .....+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p  158 (454)
T cd07101          80 LDVAIVARYYARRAERLLKPRRRRGAIP-VLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTA  158 (454)
T ss_pred             HHHHHHHHHHHHHHHHHhCCccccccCC-CCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence            9999999999999988876543221111 134678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCC
Q 009109          210 ATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDST  287 (543)
Q Consensus       210 ~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~d  287 (543)
                      .++..+.+++.++ +|+|++|+++| +.+.+..|++| +|.|.||||+++|+.|++.++++++|+++|+|||||+||++|
T Consensus       159 ~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~-~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~d  237 (454)
T cd07101         159 LTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN-ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLED  237 (454)
T ss_pred             HHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCC
Confidence            9999999999999 99999999999 66788889887 699999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHh
Q 009109          288 INLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDE  366 (543)
Q Consensus       288 aDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~  366 (543)
                      ||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|.+ ++++|||+++.+++++++++++
T Consensus       238 Adl~~a~~~i~~~~~-~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~  316 (454)
T cd07101         238 ADLDKAAAGAVRACF-SNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDD  316 (454)
T ss_pred             CCHHHHHHHHHHHHH-hcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999876 7789999999999999999999


Q ss_pred             hhc-CCEEEECcccC--CCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHH
Q 009109          367 DKV-SDKIVYGGQRD--EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQM  443 (543)
Q Consensus       367 a~~-~~~v~~gg~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~  443 (543)
                      +.+ ++++++||...  ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus       317 a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~  396 (454)
T cd07101         317 AVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGAR  396 (454)
T ss_pred             HHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHH
Confidence            875 57999998642  257899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccceeEEECCCccc-CCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          444 KKEFVQNISAGGIVFNDTIVH-TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       444 ~~~~~~~l~~G~v~iN~~~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      ++++++++++|+|+||++..+ ...+.+||||+|.||+|+++|.+++++||+.|++.
T Consensus       397 a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~  453 (454)
T cd07101         397 GRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVA  453 (454)
T ss_pred             HHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEe
Confidence            999999999999999997653 35577999999999999999999999999999985

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=100.00  E-value=1.2e-92  Score=753.89  Aligned_cols=447  Identities=30%  Similarity=0.458  Sum_probs=420.1

Q ss_pred             cCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHH
Q 009109           50 CSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEI  129 (543)
Q Consensus        50 ~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev  129 (543)
                      ||.||++++.+ +.++.+|+++++++|++||+.|++++..+|.++|++++++|++++++|++++++|+|||..++.. |+
T Consensus         2 ~P~t~~~~~~~-~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~-ev   79 (453)
T cd07099           2 NPATGEVLGEV-PVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGL-EV   79 (453)
T ss_pred             CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HH
Confidence            89999999765 99999999999999999999999999999999999999999999999999999999999998874 99


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCCh
Q 009109          130 SMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAP  209 (543)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p  209 (543)
                      ..+++.++++++.+.++.+.+.........+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p  159 (453)
T cd07099          80 LLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTP  159 (453)
T ss_pred             HHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence            99999999999999887765432221112345678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCC
Q 009109          210 ATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTI  288 (543)
Q Consensus       210 ~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~da  288 (543)
                      .++..|++++.++ +|+|+||+++|+.+.+..|++|++|.|+||||+++|+.|++.++++++|+++|+|||||+||++||
T Consensus       160 ~~~~~l~~~l~~ag~P~g~~~vv~g~~~~~~~l~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~da  239 (453)
T cd07099         160 LVGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADA  239 (453)
T ss_pred             HHHHHHHHHHHHcCCCCCeEEEEeCCchHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCC
Confidence            9999999999999 999999999996688899998889999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhh
Q 009109          289 NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDED  367 (543)
Q Consensus       289 Dl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a  367 (543)
                      |++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++++++
T Consensus       240 dl~~a~~~i~~~~~-~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a  318 (453)
T cd07099         240 DLERAAAAAVWGAM-VNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDA  318 (453)
T ss_pred             CHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999976 77999999999999999999998


Q ss_pred             hc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHH
Q 009109          368 KV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKK  445 (543)
Q Consensus       368 ~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~  445 (543)
                      .+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++
T Consensus       319 ~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~  398 (453)
T cd07099         319 VAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAE  398 (453)
T ss_pred             HhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHH
Confidence            65 67999999765 46899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          446 EFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       446 ~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      ++++++++|+|+||+.+.+...+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus       399 ~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~  452 (453)
T cd07099         399 AIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA  452 (453)
T ss_pred             HHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence            999999999999999877667789999999999999999999999999999985

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=100.00  E-value=1.1e-92  Score=753.70  Aligned_cols=446  Identities=28%  Similarity=0.419  Sum_probs=415.9

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE  128 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~E  128 (543)
                      +||.||++++.+ +.++.+|+++++++|++||+.|+++|+++|.++|++++++|++++++|++++++|+||+..++.. |
T Consensus         2 ~~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-e   79 (456)
T cd07110           2 INPATEATIGEI-PAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAW-D   79 (456)
T ss_pred             cCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-H
Confidence            489999999776 99999999999999999999999999999999999999999999999999999999999999975 9


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCC
Q 009109          129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA  208 (543)
Q Consensus       129 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~  208 (543)
                      +..+++.++++++.++++.............+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus        80 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~  159 (456)
T cd07110          80 VDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELT  159 (456)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccc
Confidence            99999999999998887643211111111224457889999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEc
Q 009109          209 PATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD  285 (543)
Q Consensus       209 p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~  285 (543)
                      |.++..+++++.++ +|+|+||+|+| +.+.+..|++|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||+
T Consensus       160 p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~  239 (456)
T cd07110         160 SLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVF  239 (456)
T ss_pred             hHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEEC
Confidence            99999999999999 99999999999 566889999997 9999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHH
Q 009109          286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLL  364 (543)
Q Consensus       286 ~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i  364 (543)
                      +|||++.|++.|++++| +|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++++++
T Consensus       240 ~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v  318 (456)
T cd07110         240 DDADLEKAVEWAMFGCF-WNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFI  318 (456)
T ss_pred             CCCCHHHHHHHHHHHHH-hcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence            99999999999999999 99999999999999999999999999999999999999987 67999999999999999999


Q ss_pred             Hhhhc-CCEEEECcccC---CCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCC
Q 009109          365 DEDKV-SDKIVYGGQRD---EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD  440 (543)
Q Consensus       365 ~~a~~-~~~v~~gg~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d  440 (543)
                      +++.. ++++++||..+   ..|+|+.|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||+++|||+|
T Consensus       319 ~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d  398 (456)
T cd07110         319 ARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRD  398 (456)
T ss_pred             HHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCC
Confidence            98865 67999999764   368899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          441 EQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       441 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      .+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|++|+++||+.|+++
T Consensus       399 ~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~  455 (456)
T cd07110         399 AERCDRVAEALEAGIVWINCSQP--CFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT  455 (456)
T ss_pred             HHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence            99999999999999999998653  5678999999999999999999999999999985

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=100.00  E-value=1.5e-92  Score=760.60  Aligned_cols=465  Identities=21%  Similarity=0.323  Sum_probs=430.2

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCc-hhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS   97 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~   97 (543)
                      .+.-||+| +|.  .++.+++++        ||.| |++++.+ +.++.+|+++++++|++|++.|+.++..+|.++|++
T Consensus        32 ~~~p~i~g-~~~--~~~~~~~v~--------~P~t~g~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~   99 (518)
T cd07125          32 EAIPIING-EET--ETGEGAPVI--------DPADHERTIGEV-SLADAEDVDAALAIAAAAFAGWSATPVEERAEILEK   99 (518)
T ss_pred             ccCceECC-EEe--eCCCeEEEE--------CCCCCCceEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence            36679999 997  356677777        8889 9999766 999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEc
Q 009109           98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS  177 (543)
Q Consensus        98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~  177 (543)
                      ++++|++++++|++++++|+|||+.++.. |+..+++.++++++.++++.+....+   ...+...+++++|+|||++|+
T Consensus       100 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~P~GVV~~I~  175 (518)
T cd07125         100 AADLLEANRGELIALAAAEAGKTLADADA-EVREAIDFCRYYAAQARELFSDPELP---GPTGELNGLELHGRGVFVCIS  175 (518)
T ss_pred             HHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccc---CCCCceeEEEEecccEEEEEC
Confidence            99999999999999999999999999974 99999999999999998876543221   113456788999999999999


Q ss_pred             CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCCh-HHHHHHHhCC-CCEEEEeCC
Q 009109          178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAV-AETSALLEQK-WDKILYTGS  254 (543)
Q Consensus       178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~-~~~~~L~~~~-v~~v~ftGS  254 (543)
                      |||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+++|+. +.+..|+.|+ +|+|+||||
T Consensus       176 p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs  255 (518)
T cd07125         176 PWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGS  255 (518)
T ss_pred             CcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECC
Confidence            999999999999999999999999999999999999999999998 9999999999954 5889999985 999999999


Q ss_pred             hHHHHHHHHHHhcc---cCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHH
Q 009109          255 PRVGRIVMAAAAKH---LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR  331 (543)
Q Consensus       255 ~~~g~~i~~~a~~~---~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~  331 (543)
                      +++|+.|++.++++   ++|+++|+|||||+||++|||++.|++.|++++| +|+||.|++++|||||++++|+|+++|+
T Consensus       256 ~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f-~nsGQ~C~a~~rv~V~~~i~d~f~~~l~  334 (518)
T cd07125         256 TETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAF-GSAGQRCSALRLLYLQEEIAERFIEMLK  334 (518)
T ss_pred             HHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcchhHHHHHHHHH
Confidence            99999999998855   8999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCC-CCceeeceEeeCCCCCCcccccccccce
Q 009109          332 NELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPL  409 (543)
Q Consensus       332 ~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPv  409 (543)
                      ++++++++|||.+ ++++||++++.+++++.++++++..++++++||..+. .|+|++|||+.++  +|++++||+||||
T Consensus       335 ~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPV  412 (518)
T cd07125         335 GAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPI  412 (518)
T ss_pred             HHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCe
Confidence            9999999999987 6799999999999999999999887789999987644 6899999999888  8999999999999


Q ss_pred             eeeeccC--CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCC-cchH
Q 009109          410 LPIVTVE--KIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGS-YHGK  486 (543)
Q Consensus       410 l~v~~~~--~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~  486 (543)
                      ++|++|+  |+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..+...+.+||||+|.||+|+ .+|.
T Consensus       413 l~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~  492 (518)
T cd07125         413 LHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGP  492 (518)
T ss_pred             EEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccH
Confidence            9999999  999999999999999999999999999999999999999999998765566789999999999995 5789


Q ss_pred             HHHHHhhhceEEEEec
Q 009109          487 FSFDAFSHKKAVLYRS  502 (543)
Q Consensus       487 ~~~~~~~~~k~v~~~~  502 (543)
                      +++++||+.|+|++..
T Consensus       493 ~~~~~ft~~k~i~~~~  508 (518)
T cd07125         493 NYLLRFGNEKTVSLNT  508 (518)
T ss_pred             HHHHHhcceEEEEEEc
Confidence            9999999999998864

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=100.00  E-value=1.6e-92  Score=752.74  Aligned_cols=460  Identities=20%  Similarity=0.297  Sum_probs=417.6

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a   99 (543)
                      +.+|||| +|..+  +.+++++        ||.||++++.+ +.++.+|+++|+++|++|+   +.++..+|.++|++++
T Consensus         4 ~~~~i~g-~~~~~--~~~~~~~--------~P~t~~~i~~~-~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a   68 (472)
T TIGR03250         4 EALRIAG-EKVSR--DRVIEVR--------YPYNGTVVGTV-PKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAA   68 (472)
T ss_pred             CCceECC-EEecC--CCeEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHH
Confidence            6789999 99863  4455555        88899999766 9999999999999999876   4689999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcc-cccCcCCCCcceEEeecc-eEEEEEc
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKA-KTSLTTYPSSAEIISEPL-GVVLVIS  177 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~-GVv~~i~  177 (543)
                      ++|++++++|++++++|+|||..++.. |+..+++.+++++..+.++.+.... .......+...++.++|+ |||++|+
T Consensus        69 ~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~  147 (472)
T TIGR03250        69 ALLAARKEEISDLITLESGLSKKDSLY-EVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAIT  147 (472)
T ss_pred             HHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEc
Confidence            999999999999999999999999975 9999999999999988765432211 000111234568899998 9999999


Q ss_pred             CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCC
Q 009109          178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS  254 (543)
Q Consensus       178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS  254 (543)
                      |||||+.++++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+++| +.+.+..|++|+ +|.|+||||
T Consensus       148 P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs  227 (472)
T TIGR03250       148 PFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGG  227 (472)
T ss_pred             CCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECc
Confidence            999999999999999999999999999999999999999999999 99999999998 567899999986 999999999


Q ss_pred             hHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH
Q 009109          255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL  334 (543)
Q Consensus       255 ~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~  334 (543)
                      +++|+.|++.++  ++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++
T Consensus       228 ~~~g~~i~~~a~--~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~  304 (472)
T TIGR03250       228 VAIGKYIAARAG--YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSY-KNSGQRCTAVKRMLVQESVADRFTELLVEKT  304 (472)
T ss_pred             HHHHHHHHHHhc--CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-HhhCCCCCCCcEEEEeHhHHHHHHHHHHHHH
Confidence            999999999875  7899999999999999999999999999999999 9999999999999999999999999999999


Q ss_pred             HhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeee
Q 009109          335 KEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI  412 (543)
Q Consensus       335 ~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v  412 (543)
                      +++++|+|.+ ++++||++++.+++++.++++++.+ ++++++||..  .|+|++|||+.+++++|++++||+||||++|
T Consensus       305 ~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~--~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v  382 (472)
T TIGR03250       305 RAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR--DGALYAPTVLDRVDPSMTLVREETFGPVSPV  382 (472)
T ss_pred             HhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc--CCEEEcCEEEeCCCCCChHHhCCCcCCeEEE
Confidence            9999999977 6789999999999999999999865 6799999865  5899999999999999999999999999999


Q ss_pred             eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC-CcchHHHHHH
Q 009109          413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG-SYHGKFSFDA  491 (543)
Q Consensus       413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~  491 (543)
                      ++|+|.+||++++|+++|||++||||+|.+++.++++++++|+|+||+.+. ...+.+||||+|.||+| +.+|.+++++
T Consensus       383 ~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~l~~  461 (472)
T TIGR03250       383 IRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPG-YRLELTPFGGIKDSGLGYKEGVQEAMKS  461 (472)
T ss_pred             EEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCC-CCCCCCCCCccccccCCCCCChHHHHHH
Confidence            999999999999999999999999999999999999999999999998764 34456999999999999 5567899999


Q ss_pred             hhhceEEEEe
Q 009109          492 FSHKKAVLYR  501 (543)
Q Consensus       492 ~~~~k~v~~~  501 (543)
                      ||+.|+++++
T Consensus       462 ft~~k~i~~~  471 (472)
T TIGR03250       462 FTNLKTYSLP  471 (472)
T ss_pred             hhceEEEEEe
Confidence            9999999764

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=100.00  E-value=1.4e-92  Score=752.96  Aligned_cols=447  Identities=28%  Similarity=0.446  Sum_probs=414.2

Q ss_pred             cccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHH
Q 009109           48 CRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFIS  127 (543)
Q Consensus        48 ~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~  127 (543)
                      ++||.||++++.+ +.++.+|+++++++|++||+.|++++..+|.++|++++++|++++++|++++++|+|||..+++. 
T Consensus         3 ~~~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-   80 (456)
T cd07145           3 VRNPANGEVIDTV-PSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV-   80 (456)
T ss_pred             ccCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-
Confidence            4599999999766 99999999999999999999999999999999999999999999999999999999999999985 


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcccccC--cCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCC
Q 009109          128 EISMTKSSCKLALKELKYWTKPEKAKTSL--TTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS  205 (543)
Q Consensus       128 Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps  205 (543)
                      |+..+++.++++++..+.+ .+.......  ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus        81 ev~~~~~~l~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps  159 (456)
T cd07145          81 EVERTIRLFKLAAEEAKVL-RGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPS  159 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHh-cCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECC
Confidence            9999999999999877643 322211110  0113346788999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcE
Q 009109          206 EIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA  282 (543)
Q Consensus       206 ~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~  282 (543)
                      +.+|.++.++++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+++|+.|++.++++++|+++|+|||||+
T Consensus       160 ~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~  239 (456)
T cd07145         160 SNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPM  239 (456)
T ss_pred             ccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCee
Confidence            99999999999999998 99999999999 567889999996 9999999999999999999999999999999999999


Q ss_pred             EEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHH
Q 009109          283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLA  361 (543)
Q Consensus       283 iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~  361 (543)
                      ||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.++++++
T Consensus       240 iV~~dAdl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~  318 (456)
T cd07145         240 IVLKDADLERAVSIAVRGRF-ENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERME  318 (456)
T ss_pred             EECCCCCHHHHHHHHHHHHH-hccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHH
Confidence            99999999999999999999 99999999999999999999999999999999999999987 77999999999999999


Q ss_pred             HHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCC
Q 009109          362 SLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD  440 (543)
Q Consensus       362 ~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d  440 (543)
                      ++++++.. ++++++||..+. |+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|
T Consensus       319 ~~i~~a~~~ga~vl~gg~~~~-g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d  397 (456)
T cd07145         319 NLVNDAVEKGGKILYGGKRDE-GSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTND  397 (456)
T ss_pred             HHHHHHHHCCCEEEeCCCCCC-CeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCC
Confidence            99999865 679999997643 8999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEE
Q 009109          441 EQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY  500 (543)
Q Consensus       441 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~  500 (543)
                      .+.++++++++++|+|+||+.+. ...+.+||||+|.||+|+++|.+|+++|++.|+|.+
T Consensus       398 ~~~~~~~~~~~~~g~v~vN~~~~-~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~~  456 (456)
T cd07145         398 INRALKVARELEAGGVVINDSTR-FRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI  456 (456)
T ss_pred             HHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCCcccccCCcCchHHHHHHhhceeEEeC
Confidence            99999999999999999998764 344689999999999999999999999999999853

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=2e-92  Score=750.00  Aligned_cols=447  Identities=22%  Similarity=0.376  Sum_probs=412.7

Q ss_pred             cccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhh-hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhH
Q 009109           48 CRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS-RKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI  126 (543)
Q Consensus        48 ~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~  126 (543)
                      +.||.||++++.+ +.++.+|+++++++|++||+. |+.++.++|.++|++++++|+++.++|++++++|+|||..++..
T Consensus         3 ~~~P~t~~~i~~~-~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~   81 (455)
T cd07148           3 VVNPFDLKPIGEV-PTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAKV   81 (455)
T ss_pred             ccCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence            4599999999766 999999999999999999998 56799999999999999999999999999999999999999985


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCcccc-cCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCC
Q 009109          127 SEISMTKSSCKLALKELKYWTKPEKAKT-SLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS  205 (543)
Q Consensus       127 ~Ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps  205 (543)
                       |+..+++.++++++.++++.+...... .....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus        82 -ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps  160 (455)
T cd07148          82 -EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPA  160 (455)
T ss_pred             -HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCC
Confidence             999999999999999888754321111 011123456889999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEE
Q 009109          206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV  283 (543)
Q Consensus       206 ~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~i  283 (543)
                      +.+|.++.++++++.++ +|+|+||+++|+.+.++.|+.|+ +|.|+||||+++|+.|++.++. .+|+++|+|||||+|
T Consensus       161 ~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~p~i  239 (455)
T cd07148         161 LATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAAPVI  239 (455)
T ss_pred             CcccHHHHHHHHHHHHcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCCceE
Confidence            99999999999999999 99999999999777899999986 9999999999999999999886 599999999999999


Q ss_pred             EcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHH
Q 009109          284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLAS  362 (543)
Q Consensus       284 V~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~  362 (543)
                      |++|||++.|++.|++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|.+ ++++||++++.+++++++
T Consensus       240 V~~dADl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~  318 (455)
T cd07148         240 VDRSADLDAMIPPLVKGGF-YHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEE  318 (455)
T ss_pred             ECCCCCHHHHHHHHHHHHH-hcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHH
Confidence            9999999999999999999 99999999999999999999999999999999999999987 678999999999999999


Q ss_pred             HHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCH
Q 009109          363 LLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE  441 (543)
Q Consensus       363 ~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~  441 (543)
                      +++++.. ++++++||... .++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus       319 ~i~~a~~~Ga~vl~gg~~~-~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~  397 (455)
T cd07148         319 WVNEAVAAGARLLCGGKRL-SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDL  397 (455)
T ss_pred             HHHHHHhCCCEEEeCCccC-CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence            9999875 67999999764 478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEE
Q 009109          442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY  500 (543)
Q Consensus       442 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~  500 (543)
                      +.++++++++++|+|+||+++. ...+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus       398 ~~~~~~~~~~~~g~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~  455 (455)
T cd07148         398 DVALKAVRRLDATAVMVNDHTA-FRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI  455 (455)
T ss_pred             HHHHHHHHHcCcCeEEECCCCC-CCCCCCCCCcchhcccCCCchHHHHHHhhceeEEeC
Confidence            9999999999999999998763 344578999999999999999999999999999853

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=100.00  E-value=2.5e-92  Score=754.22  Aligned_cols=461  Identities=23%  Similarity=0.352  Sum_probs=420.9

Q ss_pred             eeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHH
Q 009109           22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANM  101 (543)
Q Consensus        22 ~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~  101 (543)
                      +|||| +|+.+ ++++++++        ||.||++++.+ +.++.+|+++++++|++||++|++++..+|.++|++++++
T Consensus         1 ~~i~g-~~~~~-~~~~~~~~--------~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~   69 (484)
T TIGR03240         1 LFIDG-KWRAG-QGESFSST--------NPATQEVLWQG-AAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAAL   69 (484)
T ss_pred             CeECC-EEecC-CCCEEEeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHH
Confidence            58999 99876 45566666        88999999665 9999999999999999999999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCch
Q 009109          102 IEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNY  181 (543)
Q Consensus       102 l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~  181 (543)
                      |++++++|++++++|+|||..++. .|+..+++.+++++.....+.+....    ...+...++.++|+|||++|+||||
T Consensus        70 l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~  144 (484)
T TIGR03240        70 LEERKEALARVIARETGKPLWETR-TEVASMIGKVAISIKAYHERTGESEN----PMPDGRAVLRHRPHGVVAVFGPYNF  144 (484)
T ss_pred             HHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccc----CCCCceeEEEEecccEEEEECCCch
Confidence            999999999999999999999998 49999999999988877765432211    1123456788999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHH
Q 009109          182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGR  259 (543)
Q Consensus       182 P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~  259 (543)
                      |+.+.++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+|+|+.+.++.|+.|+ +|.|+||||+++|+
T Consensus       145 P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~  224 (484)
T TIGR03240       145 PGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGH  224 (484)
T ss_pred             HHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHH
Confidence            99999999999999999999999999999999999999999 99999999999778899999995 99999999999999


Q ss_pred             HHHHHHhcc-cCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcH-HHHHHHHHHHHHhh
Q 009109          260 IVMAAAAKH-LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFA-PKLIDSLRNELKEF  337 (543)
Q Consensus       260 ~i~~~a~~~-~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~l~~~~~~l  337 (543)
                      .|++.++++ .+++++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||++++ |+|+++|++.++++
T Consensus       225 ~i~~~aa~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~  303 (484)
T TIGR03240       225 LLHRQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAF-ISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERL  303 (484)
T ss_pred             HHHHHhhhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhc
Confidence            999988765 6889999999999999999999999999999999 99999999999999999985 99999999999999


Q ss_pred             cCCCCC-C-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccceeeee
Q 009109          338 FGKNPM-E-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV  413 (543)
Q Consensus       338 ~~g~~~-~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~  413 (543)
                      ++|+|. + ++++||++++.+++++.++++++.+ ++++++||.. +..++|++|||+ +++++|++++||+||||++|+
T Consensus       304 ~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~  382 (484)
T TIGR03240       304 TVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVI  382 (484)
T ss_pred             ccCCCCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEE
Confidence            999973 3 5789999999999999999999865 6788888764 345789999999 699999999999999999999


Q ss_pred             ccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhh
Q 009109          414 TVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS  493 (543)
Q Consensus       414 ~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~  493 (543)
                      +|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+...+ ..+.+||||+|.||+|+++|..+++ |+
T Consensus       383 ~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~-~~~~~pfGG~~~SG~g~~~g~~~~~-~~  460 (484)
T TIGR03240       383 RYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTG-ASSAAPFGGIGASGNHRPSAYYAAD-YC  460 (484)
T ss_pred             EeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCC-CCCCCCcCCcccccCCCCCchHHHh-he
Confidence            999999999999999999999999999999999999999999999988764 4577999999999999999977766 99


Q ss_pred             hceEEEEec
Q 009109          494 HKKAVLYRS  502 (543)
Q Consensus       494 ~~k~v~~~~  502 (543)
                      +.|+++++.
T Consensus       461 ~~~~~~~~~  469 (484)
T TIGR03240       461 AYPVASLEA  469 (484)
T ss_pred             eeeEEEEec
Confidence            999998874

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=100.00  E-value=1.9e-92  Score=749.93  Aligned_cols=440  Identities=25%  Similarity=0.384  Sum_probs=412.2

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE  128 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~E  128 (543)
                      +||.||++++.+ +.++.+|+++++++|++||+.|++++..+|.++|++++++|++++++|++++++|+|||..++.. |
T Consensus         2 ~~P~tg~~~~~~-~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-e   79 (446)
T cd07106           2 INPATGEVFASA-PVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQF-E   79 (446)
T ss_pred             cCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-H
Confidence            489999999776 99999999999999999999999999999999999999999999999999999999999999975 9


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCC
Q 009109          129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA  208 (543)
Q Consensus       129 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~  208 (543)
                      +..+++.++++++....   .....   ...+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+
T Consensus        80 v~~~~~~l~~~~~~~~~---~~~~~---~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~  153 (446)
T cd07106          80 VGGAVAWLRYTASLDLP---DEVIE---DDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFT  153 (446)
T ss_pred             HHHHHHHHHHHHhhhhc---Ccccc---CCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence            99999999998876421   11111   1124467899999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhhcCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCC
Q 009109          209 PATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDST  287 (543)
Q Consensus       209 p~~~~~l~~~l~~alP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~d  287 (543)
                      |.++.++++++.+++|+|++|+++|+.+.+..|++|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++|
T Consensus       154 p~~~~~l~~~~~~~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~d  233 (446)
T cd07106         154 PLCTLKLGELAQEVLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPD  233 (446)
T ss_pred             hHHHHHHHHHHHHhCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCC
Confidence            9999999999999999999999999777889999996 999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHh
Q 009109          288 INLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDE  366 (543)
Q Consensus       288 aDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~  366 (543)
                      ||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.+++++
T Consensus       234 ADl~~aa~~iv~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~  312 (446)
T cd07106         234 VDIDAVAPKLFWGAF-INSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVED  312 (446)
T ss_pred             CCHHHHHHHHHHHHH-HhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999987 6799999999999999999998


Q ss_pred             hhc-CCEEEECcccCC-CCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHH
Q 009109          367 DKV-SDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMK  444 (543)
Q Consensus       367 a~~-~~~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~  444 (543)
                      +.. ++++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+
T Consensus       313 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~  392 (446)
T cd07106         313 AKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERA  392 (446)
T ss_pred             HHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence            874 679999997643 588999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          445 KEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       445 ~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      +++++++++|+|+||++..  ..+.+||||+|.||+|++||.+++++||+.|+|.
T Consensus       393 ~~~~~~~~~G~v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~  445 (446)
T cd07106         393 EAVARRLEAGTVWINTHGA--LDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN  445 (446)
T ss_pred             HHHHHhCCccEEEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence            9999999999999999874  5688999999999999999999999999999985

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=100.00  E-value=2.2e-92  Score=750.45  Aligned_cols=447  Identities=24%  Similarity=0.382  Sum_probs=416.9

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhc-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRK-TKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFIS  127 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~-~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~  127 (543)
                      +||.||++++.+ +.++.+|+++++++|++||+.|+ ++|..+|.++|++++++|+++.++|++++++|+|||..++...
T Consensus         2 ~~P~tg~~i~~~-~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~   80 (459)
T cd07089           2 INPATEEVIGTA-PDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM   80 (459)
T ss_pred             cCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence            489999999766 99999999999999999999999 9999999999999999999999999999999999999877656


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCccccc-CcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCC
Q 009109          128 EISMTKSSCKLALKELKYWTKPEKAKTS-LTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE  206 (543)
Q Consensus       128 Ev~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~  206 (543)
                      |+..+++.++++++.++++......... ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus        81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~  160 (459)
T cd07089          81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP  160 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence            9999999999999999887554422111 111245678999999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEE
Q 009109          207 IAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV  283 (543)
Q Consensus       207 ~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~i  283 (543)
                      .+|.++..+.+++.++ +|+|+||+++| +.+.+..|+.|+ +|.|.||||+.+|+.|++.++++++|+++|+|||||+|
T Consensus       161 ~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~i  240 (459)
T cd07089         161 DTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANI  240 (459)
T ss_pred             CChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeE
Confidence            9999999999999998 99999999999 556789999995 99999999999999999999999999999999999999


Q ss_pred             EcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHH
Q 009109          284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLAS  362 (543)
Q Consensus       284 V~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~  362 (543)
                      |++|||++.|++.|++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.+
T Consensus       241 V~~dadl~~aa~~i~~~~~-~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~  319 (459)
T cd07089         241 VLDDADLAAAAPAAVGVCM-HNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEG  319 (459)
T ss_pred             ECCCCCHHHHHHHHHHHHH-HhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999 99999999999999999999999999999999999999987 578999999999999999


Q ss_pred             HHHhhhc-CCEEEECcccCC---CCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEec
Q 009109          363 LLDEDKV-SDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFS  438 (543)
Q Consensus       363 ~i~~a~~-~~~v~~gg~~~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t  438 (543)
                      +++++.. |+++++||....   .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus       320 ~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t  399 (459)
T cd07089         320 YIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWS  399 (459)
T ss_pred             HHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEc
Confidence            9998864 679999997643   689999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          439 DDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       439 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      +|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|+|.
T Consensus       400 ~d~~~~~~~~~~~~~G~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~  458 (459)
T cd07089         400 ADVDRAYRVARRIRTGSVGINGGGG--YGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA  458 (459)
T ss_pred             CCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence            9999999999999999999998763  5678899999999999999999999999999986

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=100.00  E-value=2.6e-92  Score=747.13  Aligned_cols=441  Identities=23%  Similarity=0.317  Sum_probs=411.5

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS--RKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI  126 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~  126 (543)
                      .||.||++++.+ +.++.+|+++|+++|++||+.  |+. ++.+|.++|++++++|++++++|++++++|+|||..++..
T Consensus         2 ~nP~t~~~i~~~-~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~   79 (455)
T cd07120           2 IDPATGEVIGTY-ADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF   79 (455)
T ss_pred             cCCCCCCEEEEE-eCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence            589999999766 999999999999999999985  998 8999999999999999999999999999999999999985


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCC
Q 009109          127 SEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE  206 (543)
Q Consensus       127 ~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~  206 (543)
                       |+..+++.++++++..++..+.. ..   ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus        80 -Ev~~~i~~l~~~~~~~~~~~g~~-~~---~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~  154 (455)
T cd07120          80 -EISGAISELRYYAGLARTEAGRM-IE---PEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAG  154 (455)
T ss_pred             -HHHHHHHHHHHHHHHHHHhcCcc-cc---cCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCC
Confidence             99999999999999887754322 11   11234578999999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhh-h-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcE
Q 009109          207 IAPATSSLLAKLLED-Y-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA  282 (543)
Q Consensus       207 ~~p~~~~~l~~~l~~-a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~  282 (543)
                      .+|.++..+++++++ + +|+|++|+|+| +.+.+..|++|+ +|.|+||||+++|+.|++.+++++||+++|+|||||+
T Consensus       155 ~~~~~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~  234 (455)
T cd07120         155 QTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPC  234 (455)
T ss_pred             CChHHHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCee
Confidence            999999999999999 6 99999999998 567899999996 9999999999999999999999999999999999999


Q ss_pred             EEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHH
Q 009109          283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLA  361 (543)
Q Consensus       283 iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~  361 (543)
                      ||++|||++.|++.|++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.++++++
T Consensus       235 IV~~daDl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~  313 (455)
T cd07120         235 IVFDDADLDAALPKLERALT-IFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVD  313 (455)
T ss_pred             EECCCCCHHHHHHHHHHHHH-HhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHH
Confidence            99999999999999999999 99999999999999999999999999999999999999976 67999999999999999


Q ss_pred             HHHHhhhc-CCEEEECccc-CC---CCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEE
Q 009109          362 SLLDEDKV-SDKIVYGGQR-DE---KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYF  436 (543)
Q Consensus       362 ~~i~~a~~-~~~v~~gg~~-~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i  436 (543)
                      ++++++.+ ++++++||.. +.   .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus       314 ~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~i  393 (455)
T cd07120         314 RMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASV  393 (455)
T ss_pred             HHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEE
Confidence            99999875 6789987754 32   5899999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          437 FSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       437 ~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      ||+|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|++||++++++||+.|+|+
T Consensus       394 ft~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~  454 (455)
T cd07120         394 WTRDLARAMRVARAIRAGTVWINDWNK--LFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY  454 (455)
T ss_pred             EcCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCccccccCccchHHHHHHHhceeEEe
Confidence            999999999999999999999998864  4578999999999999999999999999999985

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=100.00  E-value=6.3e-92  Score=747.60  Aligned_cols=443  Identities=27%  Similarity=0.372  Sum_probs=414.8

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhc-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRK-TKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFIS  127 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~-~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~  127 (543)
                      .||.||++++++ +.++.+|+++++++|++||+.|. ++|.++|.++|++++++|++++++|++++++|+|||..+++. 
T Consensus         2 ~~P~tg~~i~~~-~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-   79 (454)
T cd07109           2 FDPSTGEVFARI-ARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARA-   79 (454)
T ss_pred             cCCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-
Confidence            489999999766 99999999999999999999876 999999999999999999999999999999999999999985 


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCC
Q 009109          128 EISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEI  207 (543)
Q Consensus       128 Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~  207 (543)
                      |+..+++.++++++..+++.+.. ..   ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus        80 ev~~~~~~l~~~~~~~~~~~g~~-~~---~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~  155 (454)
T cd07109          80 DVEAAARYFEYYGGAADKLHGET-IP---LGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAED  155 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcc-cc---cCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence            99999999999998877764321 11   112446789999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEE
Q 009109          208 APATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV  284 (543)
Q Consensus       208 ~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV  284 (543)
                      +|.++..+++++.++ +|+|+||+++| +.+.++.|++|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||
T Consensus       156 ~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV  235 (454)
T cd07109         156 APLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIV  235 (454)
T ss_pred             ChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEE
Confidence            999999999999998 99999999999 778899999997 999999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHH
Q 009109          285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLL  364 (543)
Q Consensus       285 ~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i  364 (543)
                      ++|||++.|++.|++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++||++++.+++++.+++
T Consensus       236 ~~daDl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~gpli~~~~~~~~~~~i  314 (454)
T cd07109         236 FADADLEAALPVVVNAII-QNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLEDPDLGPLISAKQLDRVEGFV  314 (454)
T ss_pred             CCCCCHHHHHHHHHHHHH-hccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcccCcCCCccCHHHHHHHHHHH
Confidence            999999999999999999 9999999999999999999999999999999999999998888999999999999999999


Q ss_pred             Hhhhc-CCEEEECcccC----CCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecC
Q 009109          365 DEDKV-SDKIVYGGQRD----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSD  439 (543)
Q Consensus       365 ~~a~~-~~~v~~gg~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~  439 (543)
                      +++.. ++++++||...    ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus       315 ~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~  394 (454)
T cd07109         315 ARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTR  394 (454)
T ss_pred             HHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECC
Confidence            99864 67999998653    25899999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          440 DEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       440 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      |.+.++++++++++|+|+||++..+ ..+.+||||+|.||+|+++|.+++++|++.|+|.
T Consensus       395 d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~  453 (454)
T cd07109         395 DGDRALRVARRLRAGQVFVNNYGAG-GGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA  453 (454)
T ss_pred             CHHHHHHHHHhcCcCeEEECCCCCC-CCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence            9999999999999999999987643 4568999999999999999999999999999985

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=100.00  E-value=7.1e-92  Score=747.82  Aligned_cols=444  Identities=26%  Similarity=0.389  Sum_probs=414.8

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE  128 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~E  128 (543)
                      +||.||++++.+ +.++.+|+++++++|++||+.|++++..+|.++|+++++.|+++.++|++++++|+||+..+++. |
T Consensus         2 ~~P~t~~~i~~~-~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-e   79 (457)
T cd07090           2 IEPATGEVLATV-HCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARV-D   79 (457)
T ss_pred             cCCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-H
Confidence            489999999765 99999999999999999999999999999999999999999999999999999999999999975 9


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCC
Q 009109          129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA  208 (543)
Q Consensus       129 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~  208 (543)
                      +..+++.++++++..+.... +...   ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+
T Consensus        80 v~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~  155 (457)
T cd07090          80 IDSSADCLEYYAGLAPTLSG-EHVP---LPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFT  155 (457)
T ss_pred             HHHHHHHHHHHHHHHHHhCC-eeec---cCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcC
Confidence            99999999999987766322 2111   1124567889999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcC
Q 009109          209 PATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS  286 (543)
Q Consensus       209 p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~  286 (543)
                      |.++..+.+++.++ +|+|++|+|+|+.+.+..|+.|+ +|+|+||||+++|+.|++.++++++|+++|+|||||+||++
T Consensus       156 ~~~~~~l~~~~~~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~  235 (457)
T cd07090         156 PLTALLLAEILTEAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFD  235 (457)
T ss_pred             cHHHHHHHHHHHHcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECC
Confidence            99999999999999 99999999999777889999997 99999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 009109          287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLD  365 (543)
Q Consensus       287 daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~  365 (543)
                      |||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+
T Consensus       236 dAdl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~  314 (457)
T cd07090         236 DADLENAVNGAMMANF-LSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIE  314 (457)
T ss_pred             CCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHH
Confidence            9999999999999999 99999999999999999999999999999999999999976 679999999999999999999


Q ss_pred             hhhc-CCEEEECcccC------CCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEec
Q 009109          366 EDKV-SDKIVYGGQRD------EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFS  438 (543)
Q Consensus       366 ~a~~-~~~v~~gg~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t  438 (543)
                      ++.. ++++++||...      ..|+|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||++||||
T Consensus       315 ~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t  394 (457)
T cd07090         315 SAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFT  394 (457)
T ss_pred             HHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEc
Confidence            9875 67999999752      2588999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEe
Q 009109          439 DDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       439 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~  501 (543)
                      +|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|++.+.
T Consensus       395 ~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~  455 (457)
T cd07090         395 RDLQRAHRVIAQLQAGTCWINTYNI--SPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE  455 (457)
T ss_pred             CCHHHHHHHHHhCCcCeEEECCCCC--CCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence            9999999999999999999998653  457899999999999999999999999999999764

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=100.00  E-value=1.2e-91  Score=743.79  Aligned_cols=443  Identities=26%  Similarity=0.427  Sum_probs=412.6

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS--RKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI  126 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~  126 (543)
                      .||.||++++.+ +.++.+|+++++++|++||++  |+++|.++|.++|++++++|++++++|++++++|+|||..+++ 
T Consensus         2 ~~P~t~~~i~~~-~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-   79 (454)
T cd07118           2 RSPAHGVVVARY-AEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR-   79 (454)
T ss_pred             CCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence            389999999776 999999999999999999985  9999999999999999999999999999999999999999997 


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCC
Q 009109          127 SEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE  206 (543)
Q Consensus       127 ~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~  206 (543)
                      .|+..+++.+++++...+++.+.. ..  ....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus        80 ~ev~~~i~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~  156 (454)
T cd07118          80 GEIEGAADLWRYAASLARTLHGDS-YN--NLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSE  156 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcc-cc--cCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCC
Confidence            499999999999988665543211 11  111234567899999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEE
Q 009109          207 IAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV  283 (543)
Q Consensus       207 ~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~i  283 (543)
                      .+|.++..+++++.++ +|+|+||+++| +.+.+..|++|+ +|.|.||||+++|+.|++.++++++|+++|+|||||+|
T Consensus       157 ~~p~~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~i  236 (454)
T cd07118         157 FTSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQI  236 (454)
T ss_pred             CCcHHHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceE
Confidence            9999999999999999 99999999998 456889999996 99999999999999999999999999999999999999


Q ss_pred             EcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHH
Q 009109          284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLAS  362 (543)
Q Consensus       284 V~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~  362 (543)
                      |++|||++.|++.|++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.+
T Consensus       237 V~~dAdl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~  315 (454)
T cd07118         237 VFADADLDAAADAVVFGVY-FNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITD  315 (454)
T ss_pred             ECCCCCHHHHHHHHHHHHH-hccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHH
Confidence            9999999999999999999 99999999999999999999999999999999999999977 678999999999999999


Q ss_pred             HHHhhhc-CCEEEECcccCC--CCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecC
Q 009109          363 LLDEDKV-SDKIVYGGQRDE--KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSD  439 (543)
Q Consensus       363 ~i~~a~~-~~~v~~gg~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~  439 (543)
                      +++++.. ++++++||....  .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+
T Consensus       316 ~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~  395 (454)
T cd07118         316 YVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSK  395 (454)
T ss_pred             HHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECC
Confidence            9999875 579999997653  6899999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          440 DEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       440 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      |.+.++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|++.
T Consensus       396 d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~  453 (454)
T cd07118         396 DIDTALTVARRIRAGTVWVNTFLD--GSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH  453 (454)
T ss_pred             CHHHHHHHHHhcCcCEEEECCCCC--CCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence            999999999999999999998765  5678999999999999999999999999999975

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=100.00  E-value=1.8e-91  Score=735.44  Aligned_cols=428  Identities=65%  Similarity=1.100  Sum_probs=399.7

Q ss_pred             HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCC
Q 009109           71 SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE  150 (543)
Q Consensus        71 ~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~  150 (543)
                      +++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.+++++..+.++..+.
T Consensus         3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   82 (432)
T cd07137           3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE   82 (432)
T ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            58999999999999999999999999999999999999999999999999999875699999999999999888776543


Q ss_pred             cccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEe
Q 009109          151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRV  230 (543)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~v  230 (543)
                      .........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++++++.+++|+|++|+
T Consensus        83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~~P~gvv~~  162 (432)
T cd07137          83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAIKV  162 (432)
T ss_pred             ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEEE
Confidence            21111111233567899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhccc-CCCCc
Q 009109          231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMA-NNGQA  309 (543)
Q Consensus       231 v~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~-~~Gq~  309 (543)
                      ++|+.+.+..|++|++|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| . |+||.
T Consensus       163 v~g~~~~~~~L~~~~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f-~~~~GQ~  241 (432)
T cd07137         163 IEGGVPETTALLEQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKW-GCNNGQA  241 (432)
T ss_pred             EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhh-hccCCCc
Confidence            999778889999888999999999999999999999999999999999999999999999999999999998 7 99999


Q ss_pred             cccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCCceeece
Q 009109          310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPT  389 (543)
Q Consensus       310 C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~~Pt  389 (543)
                      |++++|+|||++++|+|+++|+++++++++|||.+.+++||++++.+++++.++++++..++++++||..+..|+|++||
T Consensus       242 C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga~~l~gg~~~~~g~~~~Pt  321 (432)
T cd07137         242 CIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVADKIVHGGERDEKNLYIEPT  321 (432)
T ss_pred             ccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCCeEEeCCCcCCCCCEEeeE
Confidence            99999999999999999999999999999999977889999999999999999999988778999999765568999999


Q ss_pred             EeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCC
Q 009109          390 ILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSS  469 (543)
Q Consensus       390 vl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~  469 (543)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++..+...+.
T Consensus       322 vl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~  401 (432)
T cd07137         322 ILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDT  401 (432)
T ss_pred             EEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998776545678


Q ss_pred             CCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          470 LPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       470 ~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      +||||+|.||+|+++|.+++++|++.|+|+
T Consensus       402 ~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~  431 (432)
T cd07137         402 LPFGGVGESGFGAYHGKFSFDAFSHKKAVL  431 (432)
T ss_pred             CCCCCcCcCcCCccccHHHHHHhccCceee
Confidence            999999999999999999999999999875

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=100.00  E-value=1.7e-91  Score=744.04  Aligned_cols=444  Identities=25%  Similarity=0.388  Sum_probs=414.4

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE  128 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~E  128 (543)
                      +||.||++++++ +.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|
T Consensus         2 ~~P~t~~~i~~~-~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~e   80 (453)
T cd07115           2 LNPATGELIARV-AQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLD   80 (453)
T ss_pred             CCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence            489999999765 9999999999999999999999999999999999999999999999999999999999999997669


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCC
Q 009109          129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA  208 (543)
Q Consensus       129 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~  208 (543)
                      +..+++.+++++.+.++..+.. .   ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus        81 v~~~i~~l~~~~~~~~~~~g~~-~---~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~  156 (453)
T cd07115          81 VPRAADTFRYYAGWADKIEGEV-I---PVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELT  156 (453)
T ss_pred             HHHHHHHHHHHHHHHHHhcCce-e---cCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCC
Confidence            9999999999988766543211 1   11234457899999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEc
Q 009109          209 PATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD  285 (543)
Q Consensus       209 p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~  285 (543)
                      |.++..+.+++.++ +|+|++|+|+| +.+.++.|+.|+ +|.|+||||+++|+.|++.++++++|+++|+||+||+||+
T Consensus       157 p~~~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~  236 (453)
T cd07115         157 PLSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVF  236 (453)
T ss_pred             cHHHHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEEC
Confidence            99999999999999 99999999999 566889999996 9999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHH
Q 009109          286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLL  364 (543)
Q Consensus       286 ~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i  364 (543)
                      +|||++.|++.|++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.+++
T Consensus       237 ~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i  315 (453)
T cd07115         237 ADADLDAAVRAAATGIF-YNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYV  315 (453)
T ss_pred             CCCCHHHHHHHHHHHHH-hccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999 99999999999999999999999999999999999999987 67999999999999999999


Q ss_pred             Hhhhc-CCEEEECcccCC-CCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHH
Q 009109          365 DEDKV-SDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQ  442 (543)
Q Consensus       365 ~~a~~-~~~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~  442 (543)
                      +++.+ ++++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+
T Consensus       316 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~  395 (453)
T cd07115         316 DVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLG  395 (453)
T ss_pred             HHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHH
Confidence            98865 569999997643 6889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEE
Q 009109          443 MKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY  500 (543)
Q Consensus       443 ~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~  500 (543)
                      .++++++++++|+|+||++.  ...+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus       396 ~~~~~~~~l~~G~v~iN~~~--~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~  451 (453)
T cd07115         396 RAHRVAAALKAGTVWINTYN--RFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWV  451 (453)
T ss_pred             HHHHHHHhcCccEEEECCCC--CCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEE
Confidence            99999999999999999864  356789999999999999999999999999999876

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=100.00  E-value=3e-91  Score=736.71  Aligned_cols=440  Identities=51%  Similarity=0.890  Sum_probs=406.1

Q ss_pred             HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCC
Q 009109           71 SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE  150 (543)
Q Consensus        71 ~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~  150 (543)
                      +|+++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++.++++....
T Consensus         2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (443)
T cd07132           2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE   81 (443)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            57899999999999999999999999999999999999999999999999999976799999999999999998886543


Q ss_pred             cccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEe
Q 009109          151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRV  230 (543)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~v  230 (543)
                      .............++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~lp~gv~~v  161 (443)
T cd07132          82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPV  161 (443)
T ss_pred             cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCeEEE
Confidence            22111111234578899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCcc
Q 009109          231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQAC  310 (543)
Q Consensus       231 v~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C  310 (543)
                      ++|+.+.+..|+.+.+|.|+||||+++|+.|.+.++++++|+++|+|||||+||++|||++.|++.|++++| +|+||.|
T Consensus       162 v~g~~~~~~~l~~~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f-~~~GQ~C  240 (443)
T cd07132         162 VLGGVEETTELLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKF-INAGQTC  240 (443)
T ss_pred             EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCce
Confidence            999766777888777999999999999999999999999999999999999999999999999999999999 9999999


Q ss_pred             ccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCCceeeceE
Q 009109          311 IGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTI  390 (543)
Q Consensus       311 ~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~~Ptv  390 (543)
                      ++++|||||++++|+|+++|+++++++++|+|.+++++||++++.+++++.+++++    +++++||..+..|+|++|||
T Consensus       241 ~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~----a~~~~gg~~~~~~~~~~Ptv  316 (443)
T cd07132         241 IAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSG----GKVAIGGQTDEKERYIAPTV  316 (443)
T ss_pred             eCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhC----CEEEeCCccCCCCCEEeeEE
Confidence            99999999999999999999999999999998778899999999999999999974    48899997766789999999


Q ss_pred             eeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCC
Q 009109          391 LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSL  470 (543)
Q Consensus       391 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~  470 (543)
                      +.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||++..+...+.+
T Consensus       317 l~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~  396 (443)
T cd07132         317 LTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSL  396 (443)
T ss_pred             EeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999988765556789


Q ss_pred             CcccCCCCCCCCcchHHHHHHhhhceEEEEecCCCCC--CCcCCCCC
Q 009109          471 PFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDS--TTRYPPYT  515 (543)
Q Consensus       471 pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~~~--~~~~~p~~  515 (543)
                      ||||+|.||+|+++|.+|+++|++.|+++++....+.  +++|+|++
T Consensus       397 PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~  443 (443)
T cd07132         397 PFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSLNMEKLNSLRYPPYS  443 (443)
T ss_pred             CCCCCCcccCCCcccHHHHHHhccccEEEEccccccccccccCCCCC
Confidence            9999999999999999999999999999877532233  78999874

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=100.00  E-value=2.3e-91  Score=743.58  Aligned_cols=443  Identities=23%  Similarity=0.389  Sum_probs=414.2

Q ss_pred             cccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHH
Q 009109           48 CRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFIS  127 (543)
Q Consensus        48 ~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~  127 (543)
                      ++||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+|||+.++.. 
T Consensus         3 ~~~P~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-   80 (451)
T cd07150           3 DLNPADGSVYARV-AVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF-   80 (451)
T ss_pred             ccCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-
Confidence            4589999999776 99999999999999999999999999999999999999999999999999999999999999975 


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCC
Q 009109          128 EISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEI  207 (543)
Q Consensus       128 Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~  207 (543)
                      |+..+++.+++++...+++.... ..  ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus        81 ev~~~~~~l~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~  157 (451)
T cd07150          81 ETTFTPELLRAAAGECRRVRGET-LP--SDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEE  157 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcc-cc--CCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCcc
Confidence            99999999999998887653321 11  1112446788999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEE
Q 009109          208 APATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV  284 (543)
Q Consensus       208 ~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV  284 (543)
                      +|.++..+++++.++ +|+|+||+++| +.+.+..|+.|+ +|+|+||||+++|+.|++.++++++|+++|+|||||+||
T Consensus       158 ~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV  237 (451)
T cd07150         158 TPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIV  237 (451)
T ss_pred             CcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEE
Confidence            999999999999999 99999999998 567889999985 999999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHH
Q 009109          285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASL  363 (543)
Q Consensus       285 ~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~  363 (543)
                      ++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++
T Consensus       238 ~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~  316 (451)
T cd07150         238 LADADLDYAVRAAAFGAF-MHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQ  316 (451)
T ss_pred             CCCCChHHHHHHHHHHHH-hhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999 99999999999999999999999999999999999999987 6789999999999999999


Q ss_pred             HHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHH
Q 009109          364 LDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQ  442 (543)
Q Consensus       364 i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~  442 (543)
                      ++++.. ++++++||..  +|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+
T Consensus       317 i~~a~~~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~  394 (451)
T cd07150         317 VEDAVAKGAKLLTGGKY--DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQ  394 (451)
T ss_pred             HHHHHhCCCEEEeCCcc--CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHH
Confidence            998875 6799999865  4889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          443 MKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       443 ~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      +++++++++++|+|+||++..+ ..+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus       395 ~~~~~~~~l~~G~v~iN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~  450 (451)
T cd07150         395 RAFKLAERLESGMVHINDPTIL-DEAHVPFGGVKASGFGREGGEWSMEEFTELKWIT  450 (451)
T ss_pred             HHHHHHHhcCcCEEEECCCCCC-CCCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence            9999999999999999998764 4578999999999999999999999999999985

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=100.00  E-value=2.8e-91  Score=743.12  Aligned_cols=443  Identities=22%  Similarity=0.360  Sum_probs=415.6

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE  128 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~E  128 (543)
                      .||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+|||..++. .|
T Consensus         1 ~~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~e   78 (452)
T cd07102           1 ISPIDGSVIAER-PLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-GE   78 (452)
T ss_pred             CCCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-HH
Confidence            389999999775 9999999999999999999999999999999999999999999999999999999999999997 59


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCC
Q 009109          129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA  208 (543)
Q Consensus       129 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~  208 (543)
                      +..+++.+++++..++++.+.....   ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus        79 v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~  155 (452)
T cd07102          79 IRGMLERARYMISIAEEALADIRVP---EKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQT  155 (452)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcccC---CCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCC
Confidence            9999999999999888876543221   1234456889999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcC
Q 009109          209 PATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS  286 (543)
Q Consensus       209 p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~  286 (543)
                      |.++..+.+++.++ +|+|++|+|+|+.+.+..|+.|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++
T Consensus       156 ~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~  235 (452)
T cd07102         156 PLCGERFAAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRP  235 (452)
T ss_pred             cHHHHHHHHHHHhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcC
Confidence            99999999999999 99999999999658899999996 99999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 009109          287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLD  365 (543)
Q Consensus       287 daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~  365 (543)
                      |||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++
T Consensus       236 dADl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~  314 (452)
T cd07102         236 DADLDAAAESLVDGAF-FNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIA  314 (452)
T ss_pred             CCCHHHHHHHHHHHHH-HhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            9999999999999999 99999999999999999999999999999999999999977 678999999999999999999


Q ss_pred             hhhc-CCEEEECccc----CCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCC
Q 009109          366 EDKV-SDKIVYGGQR----DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD  440 (543)
Q Consensus       366 ~a~~-~~~v~~gg~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d  440 (543)
                      ++.+ ++++++||..    +..|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus       315 ~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d  394 (452)
T cd07102         315 DAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKD  394 (452)
T ss_pred             HHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence            8865 6799999864    2368999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          441 EQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       441 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      .+.+.++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus       395 ~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~  451 (452)
T cd07102         395 IARAEALGEQLETGTVFMNRCDY--LDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH  451 (452)
T ss_pred             HHHHHHHHHHcCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence            99999999999999999998764  4677999999999999999999999999999985

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=100.00  E-value=2.8e-91  Score=734.78  Aligned_cols=433  Identities=48%  Similarity=0.832  Sum_probs=403.7

Q ss_pred             CCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHH
Q 009109           64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL  143 (543)
Q Consensus        64 a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~  143 (543)
                      .+.+|+++|+++|++||+.|+.++..+|.++|++++++|++++++|+++++.|+|||..++...|+..+++.+++++..+
T Consensus         2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~   81 (436)
T cd07135           2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL   81 (436)
T ss_pred             CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999999999999997569999999999999998


Q ss_pred             hhhcCCCccccc-CcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh
Q 009109          144 KYWTKPEKAKTS-LTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY  222 (543)
Q Consensus       144 ~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a  222 (543)
                      +++...+..... ....+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++++.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~~  161 (436)
T cd07135          82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY  161 (436)
T ss_pred             HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHh
Confidence            887654322111 1112346788999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCceEeecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhc
Q 009109          223 VDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW  302 (543)
Q Consensus       223 lP~gvv~vv~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~  302 (543)
                      +|+|++|+++|+.+....|+.|++|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus       162 lP~g~v~vv~g~~~~~~~l~~~~vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~  241 (436)
T cd07135         162 LDPDAFQVVQGGVPETTALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKF  241 (436)
T ss_pred             CCcCEEEEEcCCchhHHHHHhCCCCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHh
Confidence            99999999999555556788888999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCC
Q 009109          303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEK  382 (543)
Q Consensus       303 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~  382 (543)
                       .|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++||++++.+++++.++++++  ++++++||.....
T Consensus       242 -~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~a--g~~v~~gg~~~~~  318 (436)
T cd07135         242 -GNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTT--KGKVVIGGEMDEA  318 (436)
T ss_pred             -ccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhc--CCeEEECCCcCCC
Confidence             9999999999999999999999999999999999999995578999999999999999999987  7899999987667


Q ss_pred             CceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCc
Q 009109          383 QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTI  462 (543)
Q Consensus       383 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~  462 (543)
                      |+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.+
T Consensus       319 g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~  398 (436)
T cd07135         319 TRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTL  398 (436)
T ss_pred             CCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCcc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             ccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          463 VHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       463 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      .+...+.+||||+|.||+|+++|.+++++|++.|+|.
T Consensus       399 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~  435 (436)
T cd07135         399 IHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV  435 (436)
T ss_pred             ccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence            6556788999999999999999999999999999873

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=100.00  E-value=5.1e-91  Score=742.78  Aligned_cols=451  Identities=30%  Similarity=0.472  Sum_probs=416.0

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE  128 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~E  128 (543)
                      +||.||++++++ +.++.+|+++++++|++|++.|+++|..+|.++|++++++|++++++|++++++|+|||+.+++..|
T Consensus         1 ~~P~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e   79 (465)
T cd07098           1 YDPATGQHLGSV-PADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGE   79 (465)
T ss_pred             CCCCCCCeeEEe-eCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence            389999999766 9999999999999999999999999999999999999999999999999999999999999997779


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCC
Q 009109          129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA  208 (543)
Q Consensus       129 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~  208 (543)
                      +..+++.++++++..++++............+...+++++|+|||++|+|||||+..++.++++||++||+||+|||+.+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~  159 (465)
T cd07098          80 ILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQV  159 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence            99999999999988777654432211110123456788999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHH----hhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcE
Q 009109          209 PATSSLLAKLL----EDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA  282 (543)
Q Consensus       209 p~~~~~l~~~l----~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~  282 (543)
                      |+++..+++++    .++ +|+|+||+|+|+.+.+..|+.|+ ++.|.||||+++|+.|++.++++++|+++|+|||||+
T Consensus       160 p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~  239 (465)
T cd07098         160 AWSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPA  239 (465)
T ss_pred             cHHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeE
Confidence            99998877665    566 99999999999668899999996 9999999999999999999999999999999999999


Q ss_pred             EEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHH
Q 009109          283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLA  361 (543)
Q Consensus       283 iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~  361 (543)
                      ||++|||++.|++.|++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.
T Consensus       240 iV~~dadl~~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~  318 (465)
T cd07098         240 IVLDDADLDQIASIIMRGTF-QSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLE  318 (465)
T ss_pred             EECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHH
Confidence            99999999999999999999 99999999999999999999999999999999999999976 78999999999999999


Q ss_pred             HHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEE
Q 009109          362 SLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAY  435 (543)
Q Consensus       362 ~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~  435 (543)
                      ++++++.. ++++++||...     ..|+|++|||+.+++++|+++++|+||||++|++|+|++||++++|+++|||++|
T Consensus       319 ~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~  398 (465)
T cd07098         319 ELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGAS  398 (465)
T ss_pred             HHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEE
Confidence            99998865 67999998642     2589999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEe
Q 009109          436 FFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       436 i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~  501 (543)
                      |||+|.+.++++++++++|.|+||++..+...+.+||||+|.||+|+++|.+++++|++.|++.++
T Consensus       399 i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~  464 (465)
T cd07098         399 VFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED  464 (465)
T ss_pred             EEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence            999999999999999999999999977655678899999999999999999999999999999764

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=100.00  E-value=2.8e-91  Score=764.12  Aligned_cols=463  Identities=16%  Similarity=0.230  Sum_probs=411.0

Q ss_pred             ceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHH-hhhhcCCCHHHHHHHHHHHH
Q 009109           21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN-YNSRKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        21 ~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A-~~~w~~~~~~~R~~iL~~~a   99 (543)
                      ++|||| +|+.+. +.+++++        ||.||++++.+ +.++ +|+++||++|++| |+.|+++|..+|.++|++++
T Consensus         2 ~~~i~g-~~~~~~-~~~~~v~--------nP~tg~~i~~~-~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a   69 (663)
T TIGR02278         2 QSYLSG-EWRTGQ-GEGVPVR--------DASTGEVLARV-TSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALA   69 (663)
T ss_pred             ceeECC-EEEcCC-CCeEecc--------CCCCCCEEEEE-cCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHH
Confidence            689999 999874 4556666        88999999776 8888 5999999999996 99999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCc----ccc-cCcCCC-CcceEEeecc-eE
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEK----AKT-SLTTYP-SSAEIISEPL-GV  172 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~----~~~-~~~~~~-~~~~~~~~P~-GV  172 (543)
                      ++|++++++|++ +++|+|||+.+++. |+..+++.++++++..+++.....    ... +....+ ...++.++|+ ||
T Consensus        70 ~~l~~~~~ela~-~~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gv  147 (663)
T TIGR02278        70 QYLSERKEALYA-LAATTGATRRDNWV-DIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGV  147 (663)
T ss_pred             HHHHHHHHHHHH-HHHHcCCCHHHHHH-HHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCce
Confidence            999999999999 59999999999985 999999999999998876432110    001 111111 2468899998 99


Q ss_pred             EEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh--cCCCceEeecCChHHHHHHHhC-C-CCE
Q 009109          173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY--VDNSAVRVVEGAVAETSALLEQ-K-WDK  248 (543)
Q Consensus       173 v~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a--lP~gvv~vv~g~~~~~~~L~~~-~-v~~  248 (543)
                      |++|+|||||+.++++++++||++||+||+|||+.+|+++.++.+++.++  +|+|+||+|+|+.  +. +..+ + +|+
T Consensus       148 v~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~--~~-~~~~~~~~~~  224 (663)
T TIGR02278       148 AVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA--GD-LLDHLDHRDV  224 (663)
T ss_pred             EEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh--HH-HHhcCCCCCE
Confidence            99999999999999999999999999999999999999999999999997  7999999999852  22 3333 3 899


Q ss_pred             EEEeCChHHHHHHHHHH--hcccCcEEEecCCCCcEEEcCCCC-----HHHHHHHHHHhhcccCCCCccccCCEEEEeCC
Q 009109          249 ILYTGSPRVGRIVMAAA--AKHLTPVILELGGKSPAVVDSTIN-----LQVTTRRIIAGKWMANNGQACIGVDYIITTKD  321 (543)
Q Consensus       249 v~ftGS~~~g~~i~~~a--~~~~~~~~lelgG~~p~iV~~daD-----l~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~  321 (543)
                      |+||||+++|+.|++.+  +++++|+++|||||||+||++|||     ++.|++.+++++| .|+||.|++++|||||++
T Consensus       225 V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~  303 (663)
T TIGR02278       225 VAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELT-IKAGQKCTAIRRVIVPKA  303 (663)
T ss_pred             EEEECCHHHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHH-hcCCCCccCCceEEEeHH
Confidence            99999999999999874  488999999999999999999999     9999999999999 999999999999999999


Q ss_pred             cHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCC-
Q 009109          322 FAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDS-  398 (543)
Q Consensus       322 i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~-  398 (543)
                      +||+|+++|+++++++++|+|.+ ++++||++++.++++++++|+++.+ ++++++||..+.+|+|++|||+.+++++| 
T Consensus       304 i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~  383 (663)
T TIGR02278       304 LLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAG  383 (663)
T ss_pred             HHHHHHHHHHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchh
Confidence            99999999999999999999977 6789999999999999999999876 67999999765568999999999998876 


Q ss_pred             cccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc--cceeEEE-CCCc-----cc-CCCCC
Q 009109          399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI--SAGGIVF-NDTI-----VH-TTVSS  469 (543)
Q Consensus       399 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l--~~G~v~i-N~~~-----~~-~~~~~  469 (543)
                      ++++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++  ++|+|+| |+..     .+ ...+.
T Consensus       384 ~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~  463 (663)
T TIGR02278       384 AVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPR  463 (663)
T ss_pred             hHHhccccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCC
Confidence            79999999999999999999999999999999999999999999999999999  7999999 6421     11 23467


Q ss_pred             CCcccCCCCCCCCc-chHHHHHHhhhceEEEEe
Q 009109          470 LPFGGVGESGMGSY-HGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       470 ~pfGG~~~SG~G~~-~g~~~~~~~~~~k~v~~~  501 (543)
                      +||||+|.||+|++ +|.+++++|++.|+|..-
T Consensus       464 ~pfGG~k~SG~G~~~g~~~~l~~f~~~k~v~~~  496 (663)
T TIGR02278       464 LLHGGPGRAGGGEELGGLRSVKHYMQRTAIQGS  496 (663)
T ss_pred             CCCCCCccCcCCCccchHHHHHHhceeEEEEcC
Confidence            89999999999999 468999999999998664

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=100.00  E-value=4.6e-91  Score=741.04  Aligned_cols=445  Identities=24%  Similarity=0.383  Sum_probs=411.7

Q ss_pred             cccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHH
Q 009109           48 CRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFIS  127 (543)
Q Consensus        48 ~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~  127 (543)
                      ++||.||++++.+ +.++.+|+++++++|++||+.|++++..+|.++|++++++|++++++|++++++|+|||..+++. 
T Consensus         3 ~~~P~t~~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-   80 (452)
T cd07147           3 VTNPYTGEVVARV-ALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG-   80 (452)
T ss_pred             ccCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-
Confidence            4599999999776 99999999999999999999999999999999999999999999999999999999999999985 


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcc-cccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCC
Q 009109          128 EISMTKSSCKLALKELKYWTKPEKA-KTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE  206 (543)
Q Consensus       128 Ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~  206 (543)
                      |+..+++.++++++.+.++.+.... .......+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus        81 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~  160 (452)
T cd07147          81 EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPAS  160 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCC
Confidence            9999999999999988776432211 111111234567889999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEE
Q 009109          207 IAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV  284 (543)
Q Consensus       207 ~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV  284 (543)
                      .+|.++.++++++.++ +|+|+||+++|+.+.+..|+.|+ +|.|+||||+++|+.|++.++.  +|+++|+|||||+||
T Consensus       161 ~~p~~~~~l~~~l~~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~--~~v~lelgG~~p~iV  238 (452)
T cd07147         161 RTPLSALILGEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--KKVVLELGGNAAVIV  238 (452)
T ss_pred             CCcHHHHHHHHHHHHcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc--CceEeecCCCCcEEE
Confidence            9999999999999999 99999999999777889999886 9999999999999999998764  799999999999999


Q ss_pred             cCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHH
Q 009109          285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASL  363 (543)
Q Consensus       285 ~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~  363 (543)
                      ++|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++
T Consensus       239 ~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~  317 (452)
T cd07147         239 DSDADLDFAAQRIIFGAF-YQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGW  317 (452)
T ss_pred             CCCCCHHHHHHHHHHHHH-hccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999 99999999999999999999999999999999999999976 6789999999999999999


Q ss_pred             HHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHH
Q 009109          364 LDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQ  442 (543)
Q Consensus       364 i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~  442 (543)
                      ++++.+ ++++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus       318 i~~a~~~Ga~~l~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~  395 (452)
T cd07147         318 VNEAVDAGAKLLTGGKR--DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLE  395 (452)
T ss_pred             HHHHHHCCCEEEecCCc--CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence            999865 6799999875  4889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEE
Q 009109          443 MKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY  500 (543)
Q Consensus       443 ~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~  500 (543)
                      .++++++++++|+|+||+.+. ...+.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus       396 ~a~~~~~~~~~G~v~vN~~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~  452 (452)
T cd07147         396 KALRAWDELEVGGVVINDVPT-FRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI  452 (452)
T ss_pred             HHHHHHHHcCcceEEECCCCC-CCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence            999999999999999999764 345679999999999999999999999999999864

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-91  Score=744.58  Aligned_cols=465  Identities=15%  Similarity=0.216  Sum_probs=409.3

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHh-hhhcCCCHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNY-NSRKTKSYEWRMSQIQSI   98 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~-~~w~~~~~~~R~~iL~~~   98 (543)
                      -++|||| +|+.+. +.+++++        ||.||++++.+ +. +.+|+++|+++|++|+ +.|+++|+.+|.++|+++
T Consensus         5 ~~~~i~G-~~~~~~-~~~~~~~--------nP~tge~l~~v-~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~   72 (521)
T PRK11903          5 LANYVAG-RWQAGS-GAGTPLF--------DPVTGEELVRV-SA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAI   72 (521)
T ss_pred             hhhhCCC-EEEcCC-CCeeeeE--------CCCCCCEEEEe-cC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHH
Confidence            3689999 999763 4455555        88999999777 65 7899999999999995 999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccC----cC-CCCcceEEeec-ceE
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSL----TT-YPSSAEIISEP-LGV  172 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~P-~GV  172 (543)
                      +++|++++++|++++++|+|||+.+++. |+..+++.++++++..+.+.+........    .. ......+.++| +||
T Consensus        73 a~~l~~~~~ela~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GV  151 (521)
T PRK11903         73 VKVLQANRDAYYDIATANSGTTRNDSAV-DIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGV  151 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcce
Confidence            9999999999999999999999999985 99999999999999877653221111000    00 12234678899 699


Q ss_pred             EEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh--cCCCceEeecC-ChHHHHHHHhCCCCEE
Q 009109          173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY--VDNSAVRVVEG-AVAETSALLEQKWDKI  249 (543)
Q Consensus       173 v~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a--lP~gvv~vv~g-~~~~~~~L~~~~v~~v  249 (543)
                      |++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++  +|+|+||+|+| +.+.+..|  ..+|.|
T Consensus       152 v~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l--~~v~~v  229 (521)
T PRK11903        152 ALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL--QPFDVV  229 (521)
T ss_pred             EEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc--cCCCEE
Confidence            99999999999999999999999999999999999999999999999886  79999999998 44444443  359999


Q ss_pred             EEeCChHHHHHHHHHH--hcccCcEEEecCCCCcEEEcCCCC-----HHHHHHHHHHhhcccCCCCccccCCEEEEeCCc
Q 009109          250 LYTGSPRVGRIVMAAA--AKHLTPVILELGGKSPAVVDSTIN-----LQVTTRRIIAGKWMANNGQACIGVDYIITTKDF  322 (543)
Q Consensus       250 ~ftGS~~~g~~i~~~a--~~~~~~~~lelgG~~p~iV~~daD-----l~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i  322 (543)
                      +||||+++|+.|++.+  +.+++|+++|||||||+||++|||     ++.+++.+++++| .|+||.|++++|||||+++
T Consensus       230 ~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~i  308 (521)
T PRK11903        230 SFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMT-VKSGQKCTAIRRIFVPEAL  308 (521)
T ss_pred             EEECCHHHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHH-hccCCCccCCeEEEEehhH
Confidence            9999999999999965  488999999999999999999999     5999999999999 9999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccC-------CCCceeeceEeeCC
Q 009109          323 APKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD-------EKQLKIAPTILLDV  394 (543)
Q Consensus       323 ~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~-------~~g~~~~Ptvl~~~  394 (543)
                      ||+|+++|+++++++++|||.+ .+++|||+++.+++++.++|+...+++++++||...       ..|+|++|||+.++
T Consensus       309 ~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~  388 (521)
T PRK11903        309 YDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGAS  388 (521)
T ss_pred             HHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEecc
Confidence            9999999999999999999987 679999999999999999999776788999999641       24889999999876


Q ss_pred             CC--CCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc--cceeEEECCCcc-------
Q 009109          395 PD--DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI--SAGGIVFNDTIV-------  463 (543)
Q Consensus       395 ~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l--~~G~v~iN~~~~-------  463 (543)
                      ++  ++++++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.+.++++++  ++|+|+||+.+.       
T Consensus       389 ~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~  468 (521)
T PRK11903        389 DPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGH  468 (521)
T ss_pred             CCCccchHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccC
Confidence            54  4688999999999999999999999999999999999999999999999999999  899999997642       


Q ss_pred             cCCCCCCCcccCCCCCCCCcch-HHHHHHhhhceEEEE
Q 009109          464 HTTVSSLPFGGVGESGMGSYHG-KFSFDAFSHKKAVLY  500 (543)
Q Consensus       464 ~~~~~~~pfGG~~~SG~G~~~g-~~~~~~~~~~k~v~~  500 (543)
                      ....+.+||||+|.||+|+++| .+++++||+.|+|..
T Consensus       469 ~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~  506 (521)
T PRK11903        469 GNVMPQSLHGGPGRAGGGEELGGLRALAFYHRRSAVQA  506 (521)
T ss_pred             CCCCCCCCCCCCCcCcCCcccccHHHHHHHhccceeeC
Confidence            1234678999999999999954 899999999887653

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=100.00  E-value=4.1e-91  Score=741.33  Aligned_cols=446  Identities=25%  Similarity=0.386  Sum_probs=415.4

Q ss_pred             cccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcch
Q 009109           46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFE  123 (543)
Q Consensus        46 ~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~e  123 (543)
                      +.++||.||++++.+ +.++.+|+++++++|++||+  .|++++..+|.++|++++++|++++++|++++++|+|||..+
T Consensus         4 ~~~~~P~t~~~i~~~-~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~   82 (462)
T cd07112           4 FATINPATGRVLAEV-AACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPISD   82 (462)
T ss_pred             EEeECCCCCCEEEEE-eCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHH
Confidence            445599999999766 99999999999999999998  499999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEe
Q 009109          124 TFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLK  203 (543)
Q Consensus       124 a~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlK  203 (543)
                      +...|+..+++.+++++..++++.+.. ..   ...+...++.++|+|||++|+|||||+..+++++++||++||+||+|
T Consensus        83 a~~~ev~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~K  158 (462)
T cd07112          83 ALAVDVPSAANTFRWYAEAIDKVYGEV-AP---TGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLK  158 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCce-ec---CCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeee
Confidence            875699999999999999988765432 11   11234567899999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHh-cccCcEEEecCCC
Q 009109          204 PSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAA-KHLTPVILELGGK  279 (543)
Q Consensus       204 ps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~-~~~~~~~lelgG~  279 (543)
                      ||+.+|.++..+++++.++ +|+|++|+|+| +.+.+..|+.|+ +|.|+||||+++|+.|++.++ +++||+++|+||+
T Consensus       159 ps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~  238 (462)
T cd07112         159 PAEQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGK  238 (462)
T ss_pred             CCCCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCC
Confidence            9999999999999999999 99999999999 667889999886 999999999999999999988 5899999999999


Q ss_pred             CcEEEcCCC-CHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHH
Q 009109          280 SPAVVDSTI-NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHF  357 (543)
Q Consensus       280 ~p~iV~~da-Dl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~  357 (543)
                      ||+||++|| |++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.++
T Consensus       239 n~~iV~~da~dl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~  317 (462)
T cd07112         239 SPNIVFADAPDLDAAAEAAAAGIF-WNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHF  317 (462)
T ss_pred             CeEEECCCCcCHHHHHHHHHHHHH-hccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHH
Confidence            999999999 99999999999999 99999999999999999999999999999999999999987 6799999999999


Q ss_pred             HHHHHHHHhhhc-CCEEEECcccCC---CCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcE
Q 009109          358 ARLASLLDEDKV-SDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLA  433 (543)
Q Consensus       358 ~~~~~~i~~a~~-~~~v~~gg~~~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~  433 (543)
                      +++.++|+++.+ ++++++||....   .|+|++|||+.++++++++++||+||||++|++|+|.+|||+++|+++|||+
T Consensus       318 ~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~  397 (462)
T cd07112         318 DKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLA  397 (462)
T ss_pred             HHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccce
Confidence            999999999875 679999987632   5889999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          434 AYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       434 a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      +||||+|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       398 ~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~  461 (462)
T cd07112         398 ASVWTSDLSRAHRVARRLRAGTVWVNCFDE--GDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW  461 (462)
T ss_pred             EEEEcCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence            999999999999999999999999998653  5678999999999999999999999999999985

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=100.00  E-value=1.1e-90  Score=741.63  Aligned_cols=462  Identities=23%  Similarity=0.381  Sum_probs=425.8

Q ss_pred             ceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCC-CHHHHHHHHHHHH
Q 009109           21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTK-SYEWRMSQIQSIA   99 (543)
Q Consensus        21 ~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~-~~~~R~~iL~~~a   99 (543)
                      ++|||| +|+.+. +.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|+++ +.++|.++|++++
T Consensus         3 ~~~i~g-~~~~~~-~~~~~~~--------~P~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a   71 (473)
T cd07082           3 KYLING-EWKESS-GKTIEVY--------SPIDGEVIGSV-PALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFA   71 (473)
T ss_pred             CceECC-EEecCC-CCeEeeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Confidence            579999 999875 6667766        88899999655 9999999999999999999999988 9999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCc--CCCCcceEEeecceEEEEEc
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLT--TYPSSAEIISEPLGVVLVIS  177 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~  177 (543)
                      ++|++++++|++++++|+|||..++.. |+..+++.++++++.++++.+... .....  ..+...+++++|+|||++|+
T Consensus        72 ~~l~~~~~el~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~P~GVv~~I~  149 (473)
T cd07082          72 DLLKENKEEVANLLMWEIGKTLKDALK-EVDRTIDYIRDTIEELKRLDGDSL-PGDWFPGTKGKIAQVRREPLGVVLAIG  149 (473)
T ss_pred             HHHHHHHHHHHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcc-cccccccCCCceeEEEEecceEEEEEC
Confidence            999999999999999999999999975 999999999999998887644321 11110  12445688999999999999


Q ss_pred             CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCC
Q 009109          178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS  254 (543)
Q Consensus       178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS  254 (543)
                      |||||+.++++++++||++||+||+|||+.+|.++.++.+++.++ +|+|++++++| +.+.+..|+.|+ +|.|+||||
T Consensus       150 p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs  229 (473)
T cd07082         150 PFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGS  229 (473)
T ss_pred             CcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECc
Confidence            999999999999999999999999999999999999999999998 99999999999 566789999885 999999999


Q ss_pred             hHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH
Q 009109          255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL  334 (543)
Q Consensus       255 ~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~  334 (543)
                      +++|+.|.+.++  ++|+++|+||+||+||++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|.+++
T Consensus       230 ~~~g~~i~~~a~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~  306 (473)
T cd07082         230 TEVGNRLKKQHP--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGAL-SYSGQRCTAIKRVLVHESVADELVELLKEEV  306 (473)
T ss_pred             HHHHHHHHHHhC--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-HhCCCcCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence            999999999877  8999999999999999999999999999999999 9999999999999999999999999999999


Q ss_pred             HhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeee
Q 009109          335 KEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI  412 (543)
Q Consensus       335 ~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v  412 (543)
                      +++++|+|.+ .+++||++++.+++++.++++++.. ++++++||... .|+|+.|||+.+++++|++++||+||||++|
T Consensus       307 ~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~-~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v  385 (473)
T cd07082         307 AKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE-GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPI  385 (473)
T ss_pred             hcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCeEEeeEEEecCCCCCHHHhCcCcCceEEE
Confidence            9999999987 5799999999999999999998865 67999999764 3899999999999999999999999999999


Q ss_pred             eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHh
Q 009109          413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF  492 (543)
Q Consensus       413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~  492 (543)
                      ++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++|
T Consensus       386 ~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~~pfGG~k~SG~g~~~g~~~l~~~  464 (473)
T cd07082         386 IRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQR-GPDHFPFLGRKDSGIGTQGIGDALRSM  464 (473)
T ss_pred             EEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCcccccccCCCChHHHHHHh
Confidence            9999999999999999999999999999999999999999999999998754 345789999999999999999999999


Q ss_pred             hhceEEEE
Q 009109          493 SHKKAVLY  500 (543)
Q Consensus       493 ~~~k~v~~  500 (543)
                      |+.|+|++
T Consensus       465 ~~~k~i~~  472 (473)
T cd07082         465 TRRKGIVI  472 (473)
T ss_pred             hceeEEEE
Confidence            99999875

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=100.00  E-value=9.4e-91  Score=738.89  Aligned_cols=444  Identities=26%  Similarity=0.423  Sum_probs=412.1

Q ss_pred             cccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHH
Q 009109           48 CRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFIS  127 (543)
Q Consensus        48 ~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~  127 (543)
                      +.||.||++++.+ +.++.+|+++++++|++|++.|++++..+|.++|++++++|+++.++|++++++|+|||..+++. 
T Consensus         3 ~~~P~t~~~~~~~-~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-   80 (453)
T cd07094           3 VHNPYDGEVIGKV-PADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARV-   80 (453)
T ss_pred             ccCCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-
Confidence            4599999999776 99999999999999999999999999999999999999999999999999999999999999985 


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcccc-cCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCC
Q 009109          128 EISMTKSSCKLALKELKYWTKPEKAKT-SLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE  206 (543)
Q Consensus       128 Ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~  206 (543)
                      |+..+++.++++++.++++.+...... .....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus        81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~  160 (453)
T cd07094          81 EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPAS  160 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCC
Confidence            999999999999998888754221100 0001234567889999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEE
Q 009109          207 IAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV  283 (543)
Q Consensus       207 ~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~i  283 (543)
                      .+|.++..+++++.++ +|+|+||+++| +.+.++.|++|+ +|.|+||||+++|+.|++.+  +++|+++|+|||||+|
T Consensus       161 ~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~~~i  238 (453)
T cd07094         161 KTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNAPVI  238 (453)
T ss_pred             cchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCCceE
Confidence            9999999999999998 99999999999 456699999996 99999999999999999987  6899999999999999


Q ss_pred             EcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHH
Q 009109          284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLAS  362 (543)
Q Consensus       284 V~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~  362 (543)
                      |++|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.+
T Consensus       239 V~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~  317 (453)
T cd07094         239 VDRDADLDAAIEALAKGGF-YHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVER  317 (453)
T ss_pred             ECCCCCHHHHHHHHHHHHH-HhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence            9999999999999999999 99999999999999999999999999999999999999987 679999999999999999


Q ss_pred             HHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCH
Q 009109          363 LLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE  441 (543)
Q Consensus       363 ~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~  441 (543)
                      +++++.+ ++++++||..  .|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++||||+|.
T Consensus       318 ~i~~a~~~Ga~v~~gg~~--~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~  395 (453)
T cd07094         318 WVEEAVEAGARLLCGGER--DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDL  395 (453)
T ss_pred             HHHHHHHCCCEEEeCccC--CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCH
Confidence            9999865 6799999865  588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       442 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      ++++++++++++|+|+||++.. ...+.+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus       396 ~~a~~~~~~l~~g~v~iN~~~~-~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~  452 (453)
T cd07094         396 NVAFKAAEKLEVGGVMVNDSSA-FRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV  452 (453)
T ss_pred             HHHHHHHHhcCcCeEEEcCCCC-CCCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence            9999999999999999999864 34578999999999999999999999999999985

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=100.00  E-value=1.2e-90  Score=738.42  Aligned_cols=442  Identities=25%  Similarity=0.365  Sum_probs=409.9

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCc-chhhHH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP-FETFIS  127 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~-~ea~~~  127 (543)
                      +||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+||+. .+++ .
T Consensus         2 ~~P~t~~~~~~~-~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~-~   79 (457)
T cd07108           2 INPATGQVIGEV-PRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR-P   79 (457)
T ss_pred             cCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH-H
Confidence            489999999776 999999999999999999999999999999999999999999999999999999999997 6876 5


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCC
Q 009109          128 EISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEI  207 (543)
Q Consensus       128 Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~  207 (543)
                      |+..+++.+++++.....+ .....+   ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus        80 ev~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~  155 (457)
T cd07108          80 EAAVLADLFRYFGGLAGEL-KGETLP---FGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAED  155 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHh-CCceec---cCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence            9999999999998866543 222211   112345678899999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhhhcCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEc
Q 009109          208 APATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD  285 (543)
Q Consensus       208 ~p~~~~~l~~~l~~alP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~  285 (543)
                      +|.++.++.+++.+++|+|++|+++| +.+.+..|++|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||+
T Consensus       156 ~p~~~~~l~~~~~~~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~  235 (457)
T cd07108         156 APLAVLLLAEILAQVLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVF  235 (457)
T ss_pred             CcHHHHHHHHHHHHhCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEEC
Confidence            99999999999999999999999998 567889999986 9999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHhh-cccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHH
Q 009109          286 STINLQVTTRRIIAGK-WMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASL  363 (543)
Q Consensus       286 ~daDl~~aa~~iv~~~-~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~  363 (543)
                      +|||++.|++.+++++ | .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++
T Consensus       236 ~dAdl~~Aa~~iv~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~  314 (457)
T cd07108         236 PDADLDDAVDGAIAGMRF-TRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGY  314 (457)
T ss_pred             CCCCHHHHHHHHHHhhHh-hcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence            9999999999999995 9 99999999999999999999999999999999999999987 6789999999999999999


Q ss_pred             HHhhhc--CCEEEECcccC-----CCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEE
Q 009109          364 LDEDKV--SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYF  436 (543)
Q Consensus       364 i~~a~~--~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i  436 (543)
                      ++++.+  ++++++||..+     ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||
T Consensus       315 i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~v  394 (457)
T cd07108         315 IDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYV  394 (457)
T ss_pred             HHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEE
Confidence            998864  67999999763     35899999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHH-HHHhhhceEEE
Q 009109          437 FSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS-FDAFSHKKAVL  499 (543)
Q Consensus       437 ~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~-~~~~~~~k~v~  499 (543)
                      ||+|.+.++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.++ +++||+.|+++
T Consensus       395 ft~d~~~a~~~~~~l~~g~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~  456 (457)
T cd07108         395 WTRDLGRALRAAHALEAGWVQVNQGGG--QQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN  456 (457)
T ss_pred             EcCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence            999999999999999999999999864  46789999999999999999976 69999999885

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=100.00  E-value=7.9e-91  Score=732.99  Aligned_cols=423  Identities=25%  Similarity=0.431  Sum_probs=398.5

Q ss_pred             HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcC
Q 009109           69 AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTK  148 (543)
Q Consensus        69 v~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~  148 (543)
                      +++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+|||..+++. |+..+++.+++++..++++..
T Consensus         1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~   79 (429)
T cd07100           1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARA-EVEKCAWICRYYAENAEAFLA   79 (429)
T ss_pred             CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999999999999999999999999999999985 999999999999999988865


Q ss_pred             CCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCc
Q 009109          149 PEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSA  227 (543)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gv  227 (543)
                      ......    .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|.+++.++ +|+|+
T Consensus        80 ~~~~~~----~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gv  155 (429)
T cd07100          80 DEPIET----DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGV  155 (429)
T ss_pred             CeeccC----CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCc
Confidence            443221    1345788999999999999999999999999999999999999999999999999999999998 99999


Q ss_pred             eEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCC
Q 009109          228 VRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANN  306 (543)
Q Consensus       228 v~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~  306 (543)
                      +|+|+|+.+.+..|++|+ +|.|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.|++++| +|+
T Consensus       156 v~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~-~~~  234 (429)
T cd07100         156 FQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRL-QNA  234 (429)
T ss_pred             EEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hcc
Confidence            999999667788999985 999999999999999999999999999999999999999999999999999999999 999


Q ss_pred             CCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC-CC
Q 009109          307 GQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE-KQ  383 (543)
Q Consensus       307 Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~-~g  383 (543)
                      ||.|++++|||||+++||+|+++|+++++++++|+|.+ ++++||++++.+++++.++++++.+ ++++++||...+ .|
T Consensus       235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g  314 (429)
T cd07100         235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG  314 (429)
T ss_pred             CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence            99999999999999999999999999999999999976 6789999999999999999999875 679999997643 58


Q ss_pred             ceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcc
Q 009109          384 LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIV  463 (543)
Q Consensus       384 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~  463 (543)
                      +|++|||+.+++++|++++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|+|+||++..
T Consensus       315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~  394 (429)
T cd07100         315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVK  394 (429)
T ss_pred             eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998864


Q ss_pred             cCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          464 HTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       464 ~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                        ..+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus       395 --~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  428 (429)
T cd07100         395 --SDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW  428 (429)
T ss_pred             --CCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence              4678999999999999999999999999999985

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=100.00  E-value=6.7e-91  Score=741.66  Aligned_cols=456  Identities=20%  Similarity=0.331  Sum_probs=414.8

Q ss_pred             cchhhhhhcccccccceeeecceecccCCcccccccccCccccccCCch-hhhhhcccCCCHHHHHHHHHHHHHHhhhhc
Q 009109            6 VRAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATM-AAEEKQMQRFDVEKAASLMKELRNNYNSRK   84 (543)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg-~~~~~~~~~a~~~dv~~av~aA~~A~~~w~   84 (543)
                      ...|||+.    .+-.+|||| +|+.  ++.+++++        ||.|+ ++++.+ +.++.+|+++|+++|++||+.|+
T Consensus        28 ~~~~~~~~----~~~~~~i~g-~~~~--~~~~~~~~--------nP~t~~e~i~~~-~~~~~~dv~~av~~A~~a~~~W~   91 (500)
T TIGR01238        28 IHAWADKT----WQAAPIIGH-SYKA--DGEAQPVT--------NPADRRDIVGQV-FHANLAHVQAAIDSAQQAFPTWN   91 (500)
T ss_pred             HHHHhcCc----eecCceECC-EEec--CCCeEEee--------CCCCCCeEEEEE-eCCCHHHHHHHHHHHHHHHHHHh
Confidence            34566633    356899999 9986  46667766        88885 788665 89999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcce
Q 009109           85 TKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAE  164 (543)
Q Consensus        85 ~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (543)
                      ++|..+|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++++++..++++.               .
T Consensus        92 ~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~a~~~~~~~~---------------~  155 (500)
T TIGR01238        92 ATPAKERAAKLDRLADLLELHMPELMALCVREAGKTIHNAIA-EVREAVDFCRYYAKQVRDVLG---------------E  155 (500)
T ss_pred             cCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC---------------c
Confidence            999999999999999999999999999999999999999974 999999999999988765421               1


Q ss_pred             EEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHH
Q 009109          165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALL  242 (543)
Q Consensus       165 ~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~  242 (543)
                      ..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+||+++| +.+.+..|+
T Consensus       156 ~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~  235 (500)
T TIGR01238       156 FSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALT  235 (500)
T ss_pred             eeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHh
Confidence            3589999999999999999999999999999999999999999999999999999999 99999999998 458899999


Q ss_pred             hCC-CCEEEEeCChHHHHHHHHHHhccc---CcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEE
Q 009109          243 EQK-WDKILYTGSPRVGRIVMAAAAKHL---TPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIIT  318 (543)
Q Consensus       243 ~~~-v~~v~ftGS~~~g~~i~~~a~~~~---~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V  318 (543)
                      .|+ +|.|+||||+++|+.|++.+++++   +|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++||||
T Consensus       236 ~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f-~nsGQ~C~a~~rv~V  314 (500)
T TIGR01238       236 SDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAF-DSAGQRCSALRVLCV  314 (500)
T ss_pred             cCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCceeEE
Confidence            985 999999999999999999999876   799999999999999999999999999999999 999999999999999


Q ss_pred             eCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcC-CEEEECcc---c-CCCCceeeceEee
Q 009109          319 TKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVS-DKIVYGGQ---R-DEKQLKIAPTILL  392 (543)
Q Consensus       319 ~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~-~~v~~gg~---~-~~~g~~~~Ptvl~  392 (543)
                      |++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++++++.+. ++++.++.   . ...|+|++|||+.
T Consensus       315 ~~~i~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~  394 (500)
T TIGR01238       315 QEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFE  394 (500)
T ss_pred             cHhhHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEc
Confidence            99999999999999999999999976 77999999999999999999988764 56553322   1 2358999999997


Q ss_pred             CCCCCCcccccccccceeeeeccC--CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCC
Q 009109          393 DVPDDSTIMKEEIFGPLLPIVTVE--KIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSL  470 (543)
Q Consensus       393 ~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~  470 (543)
                      +  ++|.+++||+||||++|++|+  +++|||+++|+++|||++||||+|.+.++++++++++|+|+||+...+...+.+
T Consensus       395 ~--~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~  472 (500)
T TIGR01238       395 L--DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQ  472 (500)
T ss_pred             c--CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCC
Confidence            4  688899999999999999998  799999999999999999999999999999999999999999998765445668


Q ss_pred             CcccCCCCCCC-CcchHHHHHHhhhce
Q 009109          471 PFGGVGESGMG-SYHGKFSFDAFSHKK  496 (543)
Q Consensus       471 pfGG~~~SG~G-~~~g~~~~~~~~~~k  496 (543)
                      ||||+|.||+| +.+|.+++++|++.|
T Consensus       473 PfGG~k~SG~G~~~gg~~~~~~~~~~k  499 (500)
T TIGR01238       473 PFGGQGLSGTGPKAGGPHYLYRLTQVQ  499 (500)
T ss_pred             CCCccccccCCCccCCHHHHHHHHhhc
Confidence            99999999999 799999999999987

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=100.00  E-value=2e-90  Score=736.25  Aligned_cols=444  Identities=24%  Similarity=0.374  Sum_probs=413.3

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE  128 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~E  128 (543)
                      +||.||++++.+ +.++.+|+++++++|++|++.|++++..+|.++|++++++|++++++|++++++|+|||..++...|
T Consensus         2 ~~P~t~~~i~~~-~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e   80 (450)
T cd07092           2 VDPATGEEIATV-PDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE   80 (450)
T ss_pred             cCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence            489999999776 9999999999999999999999999999999999999999999999999999999999998776569


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCC
Q 009109          129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA  208 (543)
Q Consensus       129 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~  208 (543)
                      +..+++.+++++...+.+.+... ..  ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus        81 v~~~i~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~  157 (450)
T cd07092          81 LPGAVDNFRFFAGAARTLEGPAA-GE--YLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETT  157 (450)
T ss_pred             HHHHHHHHHHHHHHHHHhcCccc-Cc--cCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence            99999999999987765432211 11  1123356789999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhhcCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcC
Q 009109          209 PATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS  286 (543)
Q Consensus       209 p~~~~~l~~~l~~alP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~  286 (543)
                      |.++.++.+++.+.+|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus       158 ~~~~~~l~~~~~~glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~  237 (450)
T cd07092         158 PLTTLLLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFD  237 (450)
T ss_pred             hHHHHHHHHHHHhcCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECC
Confidence            9999999999988999999999998 455889999996 99999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 009109          287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLD  365 (543)
Q Consensus       287 daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~  365 (543)
                      |||++.|++.|++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++++
T Consensus       238 dAdl~~aa~~iv~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~  316 (450)
T cd07092         238 DADLDAAVAGIATAGY-YNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVE  316 (450)
T ss_pred             CCCHHHHHHHHHHHHH-hhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHH
Confidence            9999999999999999 99999999999999999999999999999999999999976 678999999999999999999


Q ss_pred             hhhcCCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHH
Q 009109          366 EDKVSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMK  444 (543)
Q Consensus       366 ~a~~~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~  444 (543)
                      ++.+++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+
T Consensus       317 ~a~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~  396 (450)
T cd07092         317 RAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRA  396 (450)
T ss_pred             HHHcCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence            888778999999764 3689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          445 KEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       445 ~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      +++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|+|.
T Consensus       397 ~~~~~~l~~g~v~iN~~~~--~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~  449 (450)
T cd07092         397 MRLSARLDFGTVWVNTHIP--LAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM  449 (450)
T ss_pred             HHHHHhcCccEEEECCCCC--CCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence            9999999999999998765  4678999999999999999999999999999985

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=100.00  E-value=4.9e-92  Score=750.05  Aligned_cols=453  Identities=30%  Similarity=0.502  Sum_probs=419.4

Q ss_pred             ecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q 009109           29 YRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEE  108 (543)
Q Consensus        29 ~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~e  108 (543)
                      |+++.+ ++++++        ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++
T Consensus         1 w~~~~~-~~~~v~--------~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~   70 (462)
T PF00171_consen    1 WVSSES-ETFDVI--------NPATGEVIGEV-PSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDE   70 (462)
T ss_dssp             EEE-TS-SEEEEE--------ETTTECEEEEE-EEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHH
T ss_pred             CcCCCC-CEEcCC--------CCCCcCEEEEE-cCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhcccc
Confidence            888866 558877        88899999766 89999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhh
Q 009109          109 IIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLD  188 (543)
Q Consensus       109 la~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~  188 (543)
                      |++++++|+|||..+++. |+..+++.++++++.++++.. +..+.   ..+...+++++|+|||++|+|||||+.++++
T Consensus        71 la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~  145 (462)
T PF00171_consen   71 LAELIALETGKPIAEARG-EVDRAIDFLRYYADAARKLAG-EVLPS---DPGSRNYTRREPLGVVLIITPWNFPLYLAVW  145 (462)
T ss_dssp             HHHHHHHHHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTE-EEEEE---STTEEEEEEEEE-SEEEEEE-SSSCTHHHHH
T ss_pred             cccccccccccccccccc-hhhhhhhhhhhhhhcccceeh-hhccc---ccccccccccccccceeeccccccccccccc
Confidence            999999999999999987 999999999999999988443 32221   2566789999999999999999999999999


Q ss_pred             HHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHH
Q 009109          189 PVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAA  265 (543)
Q Consensus       189 ~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a  265 (543)
                      ++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+++|+.|.+.+
T Consensus       146 ~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a  225 (462)
T PF00171_consen  146 KIAPALAAGNTVVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAA  225 (462)
T ss_dssp             HHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHH
T ss_pred             chhhhhcccccceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhc
Confidence            9999999999999999999999999999999998 99999999999 788999999995 99999999999999999999


Q ss_pred             hcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-
Q 009109          266 AKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-  344 (543)
Q Consensus       266 ~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-  344 (543)
                      +++++|+++|+||+||+||++|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ 
T Consensus       226 ~~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~  304 (462)
T PF00171_consen  226 AKNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAF-FNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDE  304 (462)
T ss_dssp             HTTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHH-GGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTST
T ss_pred             ccccccccccccccceeeEecccccccccccccchhc-ccccccccccccccccccccchhhhhhhhccccccccCCccc
Confidence            9999999999999999999999999999999999999 99999999999999999999999999999999999999977 


Q ss_pred             CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECc----ccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHH
Q 009109          345 SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGG----QRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIE  419 (543)
Q Consensus       345 ~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg----~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~  419 (543)
                      .+++||+++..+.+++.++++++.. ++++++||    .....|+|++|||+.+++++|+++++|+||||++|++|+|++
T Consensus       305 ~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~  384 (462)
T PF00171_consen  305 STDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLD  384 (462)
T ss_dssp             TCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHH
T ss_pred             cccccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccch
Confidence            7799999999999999999999875 67999998    234578999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEE
Q 009109          420 DSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV  498 (543)
Q Consensus       420 eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v  498 (543)
                      ||++++|+++|||+++|||+|.+.++++++++++|+|+||+++.+.... +||||+|.||+|+++|.+|+++|++.|+|
T Consensus       385 eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~-~pfgG~~~SG~G~~~g~~~l~~~~~~k~V  462 (462)
T PF00171_consen  385 EAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDG-LPFGGFKQSGIGREGGPEGLDEFTQIKTV  462 (462)
T ss_dssp             HHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTS-SEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred             hhhhcccccCCCceeEEecccccccccccccccccceeecCCccccccc-CCCCCcccccCCcchHHHHHHHhCCccCC
Confidence            9999999999999999999999999999999999999999998754444 89999999999999999999999999986

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=100.00  E-value=4e-90  Score=731.55  Aligned_cols=435  Identities=25%  Similarity=0.362  Sum_probs=403.2

Q ss_pred             hhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHH
Q 009109           55 AAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKS  134 (543)
Q Consensus        55 ~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~  134 (543)
                      ++++.+ +.++.+|+++++++|++||+.|++++..+|.++|++++++|++++++|++++++|+||+..++.. |+..+++
T Consensus         2 ~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~   79 (443)
T cd07152           2 AVLGEV-GVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGF-EVGAAIG   79 (443)
T ss_pred             CEEEEE-cCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHH
Confidence            445444 78999999999999999999999999999999999999999999999999999999999999875 9999999


Q ss_pred             HHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHH-H
Q 009109          135 SCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS-S  213 (543)
Q Consensus       135 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~-~  213 (543)
                      .+++++.......+ ...   ....+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ .
T Consensus        80 ~l~~~~~~~~~~~~-~~~---~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~  155 (443)
T cd07152          80 ELHEAAGLPTQPQG-EIL---PSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGV  155 (443)
T ss_pred             HHHHHHHhHHHhCC-ccc---cccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHH
Confidence            99999876654322 111   111344568899999999999999999999999999999999999999999999996 7


Q ss_pred             HHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHH
Q 009109          214 LLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQ  291 (543)
Q Consensus       214 ~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~  291 (543)
                      ++.+++.++ +|+|++|+++|+.+.+..|+.|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++
T Consensus       156 ~l~~~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~  235 (443)
T cd07152         156 VIARLFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLD  235 (443)
T ss_pred             HHHHHHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHH
Confidence            899999998 99999999999778899999986 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-
Q 009109          292 VTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-  369 (543)
Q Consensus       292 ~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-  369 (543)
                      .|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ .+++||++++.+++++.++++++.. 
T Consensus       236 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~  314 (443)
T cd07152         236 LAASNGAWGAF-LHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAA  314 (443)
T ss_pred             HHHHHHHHHHH-hhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhC
Confidence            99999999999 99999999999999999999999999999999999999976 6789999999999999999999875 


Q ss_pred             CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHh
Q 009109          370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQ  449 (543)
Q Consensus       370 ~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~  449 (543)
                      ++++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++
T Consensus       315 Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~  392 (443)
T cd07152         315 GARLEAGGTY--DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALAD  392 (443)
T ss_pred             CCEEEeccCc--CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence            6799999875  48999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccceeEEECCCcccCCCCCCCcccCCCCCCC-CcchHHHHHHhhhceEEE
Q 009109          450 NISAGGIVFNDTIVHTTVSSLPFGGVGESGMG-SYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       450 ~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~~~~~k~v~  499 (543)
                      ++++|+|+||+++.+ ..+.+||||+|.||+| +.+|.+++++|++.|+++
T Consensus       393 ~l~~G~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~  442 (443)
T cd07152         393 RLRTGMLHINDQTVN-DEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT  442 (443)
T ss_pred             hCCcCeEEECCCCCC-CCCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence            999999999998764 4578999999999999 778999999999999875

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.6e-90  Score=761.87  Aligned_cols=464  Identities=17%  Similarity=0.272  Sum_probs=410.9

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHH-hhhhcCCCHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN-YNSRKTKSYEWRMSQIQSI   98 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A-~~~w~~~~~~~R~~iL~~~   98 (543)
                      .++|||| +|+.+ ++.+++++        ||.||++++.+ +.++ +|+++||++|++| |+.|+++++.+|+++|+++
T Consensus         5 ~~~~i~G-~~~~~-~~~~~~~~--------nP~tg~~i~~~-~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~   72 (675)
T PRK11563          5 LQSYVAG-RWQTG-QGEGRPLH--------DAVTGEPVARV-SSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKAL   72 (675)
T ss_pred             ccceecC-EEEcC-CCCceecc--------CCCCCCEEEEE-cCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHH
Confidence            4789999 99987 55566666        88899999776 7777 6999999999998 7999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCc----ccccC-cCCC-CcceEEeecc-e
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEK----AKTSL-TTYP-SSAEIISEPL-G  171 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~----~~~~~-~~~~-~~~~~~~~P~-G  171 (543)
                      +++|+++.++|++ +++|+|||+.+++. |+..+++.+++++..+++......    ..... ...+ ...++.++|+ |
T Consensus        73 a~~l~~~~~ela~-l~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~G  150 (675)
T PRK11563         73 AKYLLERKEELYA-LSAQTGATRRDSWI-DIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEG  150 (675)
T ss_pred             HHHHHHhHHHHHH-HHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCc
Confidence            9999999999998 58999999999985 999999999999998766432110    00001 1111 1257888997 9


Q ss_pred             EEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh--cCCCceEeecCChHHHHHHHhC--CCC
Q 009109          172 VVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY--VDNSAVRVVEGAVAETSALLEQ--KWD  247 (543)
Q Consensus       172 Vv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a--lP~gvv~vv~g~~~~~~~L~~~--~v~  247 (543)
                      ||++|+|||||+.++++++++||++||+||+|||+.+|+++.++.+++.++  +|+|+||+|+|+..  . +..+  .+|
T Consensus       151 Vv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~--~-~~~~~~~i~  227 (675)
T PRK11563        151 VAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG--D-LLDHLDGQD  227 (675)
T ss_pred             eEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH--H-HhhcCCCCC
Confidence            999999999999999999999999999999999999999999999999996  79999999998522  2 3433  399


Q ss_pred             EEEEeCChHHHHHHHHH--HhcccCcEEEecCCCCcEEEcCCCC-----HHHHHHHHHHhhcccCCCCccccCCEEEEeC
Q 009109          248 KILYTGSPRVGRIVMAA--AAKHLTPVILELGGKSPAVVDSTIN-----LQVTTRRIIAGKWMANNGQACIGVDYIITTK  320 (543)
Q Consensus       248 ~v~ftGS~~~g~~i~~~--a~~~~~~~~lelgG~~p~iV~~daD-----l~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~  320 (543)
                      .|+||||+++|+.|++.  ++++++|+++|||||||+||++|||     ++.|++.+++++| .|+||.|++++|||||+
T Consensus       228 ~v~FTGS~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f-~~aGQ~C~a~~rv~V~~  306 (675)
T PRK11563        228 VVTFTGSAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMT-VKAGQKCTAIRRAIVPR  306 (675)
T ss_pred             EEEEECcHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHH-HhCCCccccceeEEeeH
Confidence            99999999999999985  4589999999999999999999995     9999999999999 99999999999999999


Q ss_pred             CcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccC--------CCCceeeceEe
Q 009109          321 DFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD--------EKQLKIAPTIL  391 (543)
Q Consensus       321 ~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~--------~~g~~~~Ptvl  391 (543)
                      ++||+|+++|+++++++++|||.+ ++++|||+++.+++++.++|+++.+++++++||...        ..|+|++|||+
T Consensus       307 ~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl  386 (675)
T PRK11563        307 ALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLL  386 (675)
T ss_pred             HHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCCeeECCEEE
Confidence            999999999999999999999977 679999999999999999999998779999999531        25899999999


Q ss_pred             eCCCC--CCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc--ceeEEECCCcc----
Q 009109          392 LDVPD--DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNIS--AGGIVFNDTIV----  463 (543)
Q Consensus       392 ~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~--~G~v~iN~~~~----  463 (543)
                      .++++  ++++++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.+.+++++++  +|.|+||+.+.    
T Consensus       387 ~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~  466 (675)
T PRK11563        387 YCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKES  466 (675)
T ss_pred             eccCchhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccc
Confidence            99998  57999999999999999999999999999999999999999999999999999997  99999997532    


Q ss_pred             --c-CCCCCCCcccCCCCCCCCc-chHHHHHHhhhceEEEEe
Q 009109          464 --H-TTVSSLPFGGVGESGMGSY-HGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       464 --~-~~~~~~pfGG~~~SG~G~~-~g~~~~~~~~~~k~v~~~  501 (543)
                        + ...+.+||||+|.||+|++ +|.+++++|++.|+|...
T Consensus       467 ~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~~  508 (675)
T PRK11563        467 TGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQGS  508 (675)
T ss_pred             cCCCCCCcCCCcCCCCCCCCCccccchhHHHHhheeeeeecC
Confidence              1 1236789999999999999 469999999999998664

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=100.00  E-value=9e-90  Score=724.24  Aligned_cols=427  Identities=38%  Similarity=0.706  Sum_probs=395.6

Q ss_pred             HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC-cchhhHHHHHHHHHHHHHHHHHHhhhcCC
Q 009109           71 SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKP-PFETFISEISMTKSSCKLALKELKYWTKP  149 (543)
Q Consensus        71 ~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~-~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~  149 (543)
                      ..+++|++||+.|+++++.+|.++|++++++|++++++|++++++|+||+ ..++...|+..+++.++++++.+.++.++
T Consensus         2 ~~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~   81 (434)
T cd07133           2 ALLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKP   81 (434)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            35788999999999999999999999999999999999999999999985 56776569999999999999998887765


Q ss_pred             CcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceE
Q 009109          150 EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVR  229 (543)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~  229 (543)
                      ..........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+++|+|+||
T Consensus        82 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~alP~g~~~  161 (434)
T cd07133          82 SRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDEDEVA  161 (434)
T ss_pred             cccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEE
Confidence            43221111224457899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCc
Q 009109          230 VVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA  309 (543)
Q Consensus       230 vv~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~  309 (543)
                      +++|+.+.+..|+.|++|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.
T Consensus       162 ~v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~  240 (434)
T cd07133         162 VVTGGADVAAAFSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKL-LNAGQT  240 (434)
T ss_pred             EEeCChHHHHHHHhCCCCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHh-ccCCCc
Confidence            9999777888888778999999999999999999999999999999999999999999999999999999999 999999


Q ss_pred             cccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC---CCCce
Q 009109          310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD---EKQLK  385 (543)
Q Consensus       310 C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~---~~g~~  385 (543)
                      |++++|||||++++|+|+++|+++++++++|+ .+++++||++++.+++++.++++++++ ++++++||...   ..|+|
T Consensus       241 C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~-~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~  319 (434)
T cd07133         241 CVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL-ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRK  319 (434)
T ss_pred             ccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC-CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcE
Confidence            99999999999999999999999999999886 467789999999999999999999865 67999998653   35899


Q ss_pred             eeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccC
Q 009109          386 IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHT  465 (543)
Q Consensus       386 ~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~  465 (543)
                      ++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+++.+.
T Consensus       320 ~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~  399 (434)
T cd07133         320 LPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHV  399 (434)
T ss_pred             EeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987655


Q ss_pred             CCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          466 TVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       466 ~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      ..+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus       400 ~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~  433 (434)
T cd07133         400 AQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF  433 (434)
T ss_pred             CCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence            6688999999999999999999999999999874

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=100.00  E-value=8.4e-90  Score=731.89  Aligned_cols=443  Identities=27%  Similarity=0.404  Sum_probs=411.7

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI  126 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~  126 (543)
                      +||.||++++++ +.++.+|+++++++|++|++  .|+.+|.++|.++|++++++|.+++++|++++++|+|||..+++.
T Consensus         2 ~~P~tg~~i~~~-~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~   80 (457)
T cd07114           2 INPATGEPWARV-PEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA   80 (457)
T ss_pred             cCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence            589999999766 99999999999999999997  499999999999999999999999999999999999999999985


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCC
Q 009109          127 SEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE  206 (543)
Q Consensus       127 ~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~  206 (543)
                       |+..+++.+++++...+...... .  .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus        81 -ev~~~~~~~~~~a~~~~~~~~~~-~--~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~  156 (457)
T cd07114          81 -QVRYLAEWYRYYAGLADKIEGAV-I--PVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSE  156 (457)
T ss_pred             -HHHHHHHHHHHHHHHHHHhcCcc-c--ccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCc
Confidence             99999999999987766532211 1  1111334578899999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEE
Q 009109          207 IAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV  283 (543)
Q Consensus       207 ~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~i  283 (543)
                      .+|.++..+++++.++ +|+|+||+++| +.+.+..|+.|+ +|+|+||||+++|+.|++.++++++|+++|+||+||+|
T Consensus       157 ~~p~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~i  236 (457)
T cd07114         157 HTPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNI  236 (457)
T ss_pred             cchHHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeE
Confidence            9999999999999999 99999999999 556889999996 99999999999999999999999999999999999999


Q ss_pred             EcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHH
Q 009109          284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLAS  362 (543)
Q Consensus       284 V~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~  362 (543)
                      |++|||++.|++.|++++| +|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+++++.+
T Consensus       237 V~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~  315 (457)
T cd07114         237 VFDDADLDAAVNGVVAGIF-AAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVER  315 (457)
T ss_pred             ECCCCCHHHHHHHHHHHHH-hccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999 99999999999999999999999999999999999999987 679999999999999999


Q ss_pred             HHHhhhc-CCEEEECcccCC-----CCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEE
Q 009109          363 LLDEDKV-SDKIVYGGQRDE-----KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYF  436 (543)
Q Consensus       363 ~i~~a~~-~~~v~~gg~~~~-----~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i  436 (543)
                      +++++.. ++++++||....     .|+|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||++||
T Consensus       316 ~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~i  395 (457)
T cd07114         316 YVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGI  395 (457)
T ss_pred             HHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEE
Confidence            9998865 679999997532     5899999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          437 FSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       437 ~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      ||+|.+.++++++++++|+|+||+...  ..+.+||||+|.||+|+++|.+++++||+.|++.
T Consensus       396 ft~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~  456 (457)
T cd07114         396 WTRDLARAHRVARAIEAGTVWVNTYRA--LSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW  456 (457)
T ss_pred             ECCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHHhceeEEe
Confidence            999999999999999999999998654  5678999999999999999999999999999985

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=100.00  E-value=8.3e-89  Score=724.76  Aligned_cols=443  Identities=26%  Similarity=0.421  Sum_probs=413.5

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE  128 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~E  128 (543)
                      +||.||++++.+ +.++.+|+++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+||+..+++..|
T Consensus         2 ~~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e   80 (455)
T cd07093           2 FNPATGEVLAKV-PEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD   80 (455)
T ss_pred             cCCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence            489999999766 9999999999999999999999999999999999999999999999999999999999999887679


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCC
Q 009109          129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA  208 (543)
Q Consensus       129 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~  208 (543)
                      +..+++.++++++...+... ....   ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus        81 v~~~i~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~  156 (455)
T cd07093          81 IPRAAANFRFFADYILQLDG-ESYP---QDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWT  156 (455)
T ss_pred             HHHHHHHHHHHHHhHHHhCC-cccc---CCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcC
Confidence            99999999999988766322 2111   1124567789999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEc
Q 009109          209 PATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD  285 (543)
Q Consensus       209 p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~  285 (543)
                      |.++..+.+++.++ +|+|+||+++| +.+.+..|+.|+ +|+|+||||+.+|+.|++.++++++|+++|+||+||+||+
T Consensus       157 p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~  236 (455)
T cd07093         157 PLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVF  236 (455)
T ss_pred             cHHHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEEC
Confidence            99999999999999 99999999998 577889999986 9999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHH
Q 009109          286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLL  364 (543)
Q Consensus       286 ~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i  364 (543)
                      +|||++.|++.|++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.+++
T Consensus       237 ~dAdl~~a~~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i  315 (455)
T cd07093         237 ADADLDRAVDAAVRSSF-SNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYV  315 (455)
T ss_pred             CCCCHHHHHHHHHHHHH-hccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHH
Confidence            99999999999999999 99999999999999999999999999999999999999977 67899999999999999999


Q ss_pred             Hhhhc-CCEEEECcccCC-----CCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEec
Q 009109          365 DEDKV-SDKIVYGGQRDE-----KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFS  438 (543)
Q Consensus       365 ~~a~~-~~~v~~gg~~~~-----~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t  438 (543)
                      +++.. ++++++||....     .|+|++|||+.++++++++++||+||||++|++|+|.+|||+++|++++||++||||
T Consensus       316 ~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t  395 (455)
T cd07093         316 ELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWT  395 (455)
T ss_pred             HHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEC
Confidence            98864 679999997642     488999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          439 DDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       439 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      +|.+.++++++++++|+|+||++..+  .+.+||||+|.||+|+++|.+|+++|++.|+++
T Consensus       396 ~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~  454 (455)
T cd07093         396 RDLGRAHRVARRLEAGTVWVNCWLVR--DLRTPFGGVKASGIGREGGDYSLEFYTELKNVC  454 (455)
T ss_pred             CCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence            99999999999999999999998763  467999999999999999999999999999985

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=100.00  E-value=9.6e-89  Score=720.46  Aligned_cols=440  Identities=25%  Similarity=0.365  Sum_probs=404.8

Q ss_pred             cccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHH
Q 009109           48 CRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFIS  127 (543)
Q Consensus        48 ~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~  127 (543)
                      +.||.||++++.+ +.++.+|+++++++|+++   |++++..+|.++|++++++|++++++|++++++|+|||..++.. 
T Consensus         3 ~~~P~tg~~i~~~-~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-   77 (451)
T cd07146           3 VRNPYTGEVVGTV-PAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRY-   77 (451)
T ss_pred             ccCCCCCCEEEEE-cCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-
Confidence            4589999999776 999999999999999875   88899999999999999999999999999999999999999975 


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcccccC--cCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCC
Q 009109          128 EISMTKSSCKLALKELKYWTKPEKAKTSL--TTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS  205 (543)
Q Consensus       128 Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps  205 (543)
                      |+..+++.+++++.....+.+.. .....  ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus        78 ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps  156 (451)
T cd07146          78 EVGRAADVLRFAAAEALRDDGES-FSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPS  156 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcc-cccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECC
Confidence            99999999999998877653322 11110  1123456789999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcE
Q 009109          206 EIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA  282 (543)
Q Consensus       206 ~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~  282 (543)
                      +.+|+++..+.+++.++ +|+|+||+++| +.+.+..|++|+ +|.|+||||+.+|+.|++.++  ++|+++|+|||||+
T Consensus       157 ~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~p~  234 (451)
T cd07146         157 EKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGNDPL  234 (451)
T ss_pred             CCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCceE
Confidence            99999999999999998 99999999998 567899999996 999999999999999998775  68999999999999


Q ss_pred             EEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHH
Q 009109          283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLA  361 (543)
Q Consensus       283 iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~  361 (543)
                      ||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.++++++
T Consensus       235 iV~~daDl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~  313 (451)
T cd07146         235 IVMDDADLERAATLAVAGSY-ANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIE  313 (451)
T ss_pred             EECCCCCHHHHHHHHHHHHH-hhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHH
Confidence            99999999999999999999 99999999999999999999999999999999999999976 67899999999999999


Q ss_pred             HHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCC
Q 009109          362 SLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD  440 (543)
Q Consensus       362 ~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d  440 (543)
                      ++++++.. ++++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus       314 ~~v~~a~~~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d  391 (451)
T cd07146         314 NRVEEAIAQGARVLLGNQR--QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTND  391 (451)
T ss_pred             HHHHHHHhCCCEEEeCCCc--CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCC
Confidence            99998865 6799999864  48899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCC-CCcchHHHHHHhhhceEEE
Q 009109          441 EQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM-GSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       441 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~-G~~~g~~~~~~~~~~k~v~  499 (543)
                      .++++++++++++|+|+||+.+. ...+.+||||+|.||+ |+++|.+|+++||+.|+++
T Consensus       392 ~~~~~~~~~~l~~G~v~iN~~~~-~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~  450 (451)
T cd07146         392 LDTIKRLVERLDVGTVNVNEVPG-FRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS  450 (451)
T ss_pred             HHHHHHHHHHCCcceEEECCCCC-CCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence            99999999999999999998753 3456899999999995 8999999999999999875

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=100.00  E-value=1.3e-88  Score=722.95  Aligned_cols=443  Identities=27%  Similarity=0.417  Sum_probs=413.8

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHH
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE  128 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~E  128 (543)
                      +||.||++++.+ +.++.+|+++++++|++|++.|++++.++|.++|+++++.|+++.++|++++++|+|||..+++. |
T Consensus         2 ~~P~tg~~i~~~-~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-e   79 (451)
T cd07103           2 INPATGEVIGEV-PDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARG-E   79 (451)
T ss_pred             cCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-H
Confidence            589999999766 99999999999999999999999999999999999999999999999999999999999999985 9


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCC
Q 009109          129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA  208 (543)
Q Consensus       129 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~  208 (543)
                      +..+++.+++++...++..+.. .  +....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus        80 v~~~~~~l~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~  156 (451)
T cd07103          80 VDYAASFLEWFAEEARRIYGRT-I--PSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEET  156 (451)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcc-c--ccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccC
Confidence            9999999999988877654322 1  111234567899999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEc
Q 009109          209 PATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD  285 (543)
Q Consensus       209 p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~  285 (543)
                      |.++..+.+++.++ +|+|+||+++| +.+.++.|+.|+ +|.|+||||+++|+.|.+.++++++|+++|+|||||+||+
T Consensus       157 ~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~  236 (451)
T cd07103         157 PLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVF  236 (451)
T ss_pred             cHHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEEC
Confidence            99999999999998 99999999999 567788899885 9999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHH
Q 009109          286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLL  364 (543)
Q Consensus       286 ~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i  364 (543)
                      +|||++.|++.|++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.+++
T Consensus       237 ~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i  315 (451)
T cd07103         237 DDADLDKAVDGAIASKF-RNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALV  315 (451)
T ss_pred             CCCCHHHHHHHHHHHHH-HhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHH
Confidence            99999999999999999 99999999999999999999999999999999999999976 67899999999999999999


Q ss_pred             Hhhhc-CCEEEECcccCC-CCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHH
Q 009109          365 DEDKV-SDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQ  442 (543)
Q Consensus       365 ~~a~~-~~~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~  442 (543)
                      +++.. ++++++||.... .|+|++|||+.+++++++++++|+||||++|++|+|++|||+++|++++||++||||+|.+
T Consensus       316 ~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~  395 (451)
T cd07103         316 EDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLA  395 (451)
T ss_pred             HHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHH
Confidence            98864 679999987643 6899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          443 MKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       443 ~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      .++++++++++|.|+||++..  ..+.+||||+|.||+|+++|++++++||+.|++.
T Consensus       396 ~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~  450 (451)
T cd07103         396 RAWRVAEALEAGMVGINTGLI--SDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS  450 (451)
T ss_pred             HHHHHHHhCCcceEEECCCCC--CCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence            999999999999999999874  4677999999999999999999999999999874

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=100.00  E-value=1.6e-88  Score=714.55  Aligned_cols=428  Identities=44%  Similarity=0.758  Sum_probs=398.7

Q ss_pred             HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCC
Q 009109           71 SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE  150 (543)
Q Consensus        71 ~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~  150 (543)
                      +++++|++||+.|++++..+|.++|++++++|++++++|++++++|+|||+.+++..|+..+++.+++++..+..+....
T Consensus         2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (433)
T cd07134           2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK   81 (433)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            57899999999999999999999999999999999999999999999999999875699999999999998877765543


Q ss_pred             cccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEe
Q 009109          151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRV  230 (543)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~v  230 (543)
                      ....+....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++.+++.+++|+|+|++
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a~p~g~v~~  161 (433)
T cd07134          82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEVAV  161 (433)
T ss_pred             ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCEEEE
Confidence            22111112344678999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCcc
Q 009109          231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQAC  310 (543)
Q Consensus       231 v~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C  310 (543)
                      ++|+.+.+..|++|++|.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .++||.|
T Consensus       162 v~g~~~~~~~l~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~-~~~GQ~C  240 (433)
T cd07134         162 FEGDAEVAQALLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKF-LNAGQTC  240 (433)
T ss_pred             EeCChhHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhh-cCcCCcc
Confidence            999878899999999999999999999999999999999999999999999999999999999999999999 9999999


Q ss_pred             ccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCC-C-CCCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceee
Q 009109          311 IGVDYIITTKDFAPKLIDSLRNELKEFFGKNP-M-ESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIA  387 (543)
Q Consensus       311 ~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~-~-~~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~  387 (543)
                      +++++||||++++|+|+++|+++++++.+++| . .++++||++++.+++++.++++++.+ ++++++||..+..|+|++
T Consensus       241 ~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~g~~~~  320 (433)
T cd07134         241 IAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQRYIA  320 (433)
T ss_pred             cCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCEEe
Confidence            99999999999999999999999999988885 4 47789999999999999999999865 679999998766689999


Q ss_pred             ceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCC
Q 009109          388 PTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTV  467 (543)
Q Consensus       388 Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~  467 (543)
                      |||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||+.+.+...
T Consensus       321 Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~  400 (433)
T cd07134         321 PTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLN  400 (433)
T ss_pred             eEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998765556


Q ss_pred             CCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          468 SSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       468 ~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      +.+||||+|.||+|+++|.+++++||+.|+|.
T Consensus       401 ~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~  432 (433)
T cd07134         401 PNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL  432 (433)
T ss_pred             CCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence            88999999999999999999999999999875

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=3.3e-88  Score=720.56  Aligned_cols=444  Identities=26%  Similarity=0.423  Sum_probs=408.7

Q ss_pred             cccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHH
Q 009109           48 CRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFIS  127 (543)
Q Consensus        48 ~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~  127 (543)
                      +.||.||++++.+ +.++.+|+++++++|++|++.|++++..+|.++|++++++|+++.++|++++++|+|||..++.. 
T Consensus         3 ~~~P~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-   80 (453)
T cd07149           3 VISPYDGEVIGRV-PVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK-   80 (453)
T ss_pred             ccCCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH-
Confidence            4599999999655 99999999999999999999999999999999999999999999999999999999999999984 


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCccccc-CcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCC
Q 009109          128 EISMTKSSCKLALKELKYWTKPEKAKTS-LTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE  206 (543)
Q Consensus       128 Ev~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~  206 (543)
                      |+..+++.++++++.+..+.+....... ....+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus        81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~  160 (453)
T cd07149          81 EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPAS  160 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCC
Confidence            9999999999999887765432211000 001123457889999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEE
Q 009109          207 IAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV  283 (543)
Q Consensus       207 ~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~i  283 (543)
                      .+|.++.++.+++.++ +|+|++|+++| +.+.+..|+.|+ +|+|+||||+++|+.|++.++  ++|+++|+|||||+|
T Consensus       161 ~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~p~i  238 (453)
T cd07149         161 QTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVI  238 (453)
T ss_pred             cchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCceEE
Confidence            9999999999999998 99999999999 455689999986 999999999999999999875  799999999999999


Q ss_pred             EcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHH
Q 009109          284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLAS  362 (543)
Q Consensus       284 V~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~  362 (543)
                      |++|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.+
T Consensus       239 V~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~  317 (453)
T cd07149         239 VDADADLEKAVERCVSGAF-ANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEE  317 (453)
T ss_pred             ECCCCCHHHHHHHHHHHHH-HhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHH
Confidence            9999999999999999999 99999999999999999999999999999999999999987 678999999999999999


Q ss_pred             HHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCH
Q 009109          363 LLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE  441 (543)
Q Consensus       363 ~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~  441 (543)
                      +++++.. ++++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.
T Consensus       318 ~i~~a~~~ga~v~~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~  395 (453)
T cd07149         318 WVEEAVEGGARLLTGGKR--DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDL  395 (453)
T ss_pred             HHHHHHHCCCEEEeCCCC--CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCH
Confidence            9998864 6799999865  478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       442 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      +.++++++++++|+|+||+++. ...+.+||||+|.||+|+++|.+|+++|++.|+|.
T Consensus       396 ~~~~~~~~~l~~g~v~iN~~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~  452 (453)
T cd07149         396 QKALKAARELEVGGVMINDSST-FRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC  452 (453)
T ss_pred             HHHHHHHHHcCcCeEEECCCCC-CCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence            9999999999999999999874 34467999999999999999999999999999885

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=100.00  E-value=3e-88  Score=712.06  Aligned_cols=420  Identities=24%  Similarity=0.372  Sum_probs=390.6

Q ss_pred             HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhc
Q 009109           68 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWT  147 (543)
Q Consensus        68 dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~  147 (543)
                      |+++++++|++||+.|+++|..+|.++|++++++|+++.++|++++++|+|||..++.. |+..+++.+++++..+.++.
T Consensus         1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~   79 (431)
T cd07095           1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQT-EVAAMAGKIDISIKAYHERT   79 (431)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999999999999999999999999999999985 99999999999999888876


Q ss_pred             CCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCC
Q 009109          148 KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNS  226 (543)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~g  226 (543)
                      ......    ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++.+++.++ +|+|
T Consensus        80 ~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g  155 (431)
T cd07095          80 GERATP----MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPG  155 (431)
T ss_pred             CCcccC----CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChh
Confidence            543221    12456788999999999999999999999999999999999999999999999999999999998 9999


Q ss_pred             ceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcc-cCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhccc
Q 009109          227 AVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKH-LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMA  304 (543)
Q Consensus       227 vv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~-~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~  304 (543)
                      ++|+++|+.+.+..|++|+ +|.|+||||+++|+.|++.++.+ ++++++|+|||||+||++|||++.|++.+++++| +
T Consensus       156 ~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~-~  234 (431)
T cd07095         156 VLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAF-L  234 (431)
T ss_pred             HheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-H
Confidence            9999999777889999996 99999999999999999987754 6999999999999999999999999999999999 9


Q ss_pred             CCCCccccCCEEEEeCC-cHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-C
Q 009109          305 NNGQACIGVDYIITTKD-FAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-D  380 (543)
Q Consensus       305 ~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~  380 (543)
                      |+||.|++++|||||++ ++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++++++.. ++++++||.. +
T Consensus       235 ~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~  314 (431)
T cd07095         235 TAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLV  314 (431)
T ss_pred             hCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCC
Confidence            99999999999999999 99999999999999999999977 5789999999999999999999875 6799999865 3


Q ss_pred             CCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECC
Q 009109          381 EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFND  460 (543)
Q Consensus       381 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~  460 (543)
                      .+|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+
T Consensus       315 ~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~  393 (431)
T cd07095         315 AGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNR  393 (431)
T ss_pred             CCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECC
Confidence            46899999999 69999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 009109          461 TIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHK  495 (543)
Q Consensus       461 ~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~  495 (543)
                      +.. ...+.+||||+|.||+|+++|.+|++.|+.+
T Consensus       394 ~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~  427 (431)
T cd07095         394 PTT-GASSTAPFGGVGLSGNHRPSAYYAADYCAYP  427 (431)
T ss_pred             CCC-CCCCCCCCCCcccccCCCCChHHHHHHHhhh
Confidence            765 3456799999999999999999999955443

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=100.00  E-value=7.1e-88  Score=711.67  Aligned_cols=422  Identities=29%  Similarity=0.475  Sum_probs=392.6

Q ss_pred             HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhc
Q 009109           68 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWT  147 (543)
Q Consensus        68 dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~  147 (543)
                      |+++++++|++||+.|++++.++|.++|++++++|+++.++|++++++|+|||..++.. |+..+++.++++++..+.+.
T Consensus         1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~~~   79 (432)
T cd07105           1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGF-NVDLAAGMLREAASLITQII   79 (432)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999999999999999999999999999888864 99999999999999887652


Q ss_pred             CCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCC
Q 009109          148 KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNS  226 (543)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~g  226 (543)
                      ... ..  ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++ +|+|
T Consensus        80 ~~~-~~--~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~g  156 (432)
T cd07105          80 GGS-IP--SDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKG  156 (432)
T ss_pred             Cee-cc--cCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCC
Confidence            221 11  1112345688999999999999999999999999999999999999999999999999999999998 9999


Q ss_pred             ceEeecCC----hHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhh
Q 009109          227 AVRVVEGA----VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGK  301 (543)
Q Consensus       227 vv~vv~g~----~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~  301 (543)
                      +||+++|+    .+.+..|++|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++
T Consensus       157 v~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~  236 (432)
T cd07105         157 VLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGA  236 (432)
T ss_pred             cEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence            99999973    34688999997 99999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC
Q 009109          302 WMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD  380 (543)
Q Consensus       302 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~  380 (543)
                      | +|+||.|+++++||||+++||+|+++|+++++++++|    ++++||++++.+++++.++++++.+ ++++++||...
T Consensus       237 ~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~  311 (432)
T cd07105         237 F-LNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD  311 (432)
T ss_pred             H-hcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence            9 9999999999999999999999999999999999987    5789999999999999999998865 67999999764


Q ss_pred             --CCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEE
Q 009109          381 --EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVF  458 (543)
Q Consensus       381 --~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~i  458 (543)
                        ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+|
T Consensus       312 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~v  391 (432)
T cd07105         312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHI  391 (432)
T ss_pred             CCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEE
Confidence              368999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          459 NDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       459 N~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      |++..+ ..+.+||||+|.||+|+++|.+++++|++.|+|.
T Consensus       392 N~~~~~-~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~  431 (432)
T cd07105         392 NGMTVH-DEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT  431 (432)
T ss_pred             CCCCCC-CCCCCCCCCcccccccccChHHHHHHhhceEEEe
Confidence            998754 4678999999999999999999999999999985

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=100.00  E-value=1.2e-87  Score=707.73  Aligned_cols=424  Identities=53%  Similarity=0.913  Sum_probs=395.2

Q ss_pred             HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCC
Q 009109           71 SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE  150 (543)
Q Consensus        71 ~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~  150 (543)
                      .++++|++||+.|+.+|+.+|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++..++.+....
T Consensus         2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~   81 (426)
T cd07087           2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR   81 (426)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            48899999999999999999999999999999999999999999999999888766699999999999999888765543


Q ss_pred             cccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEe
Q 009109          151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRV  230 (543)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~v  230 (543)
                      .........+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++.++++++.+++|+|++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~~~P~gv~~v  161 (426)
T cd07087          82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPKYFDPEAVAV  161 (426)
T ss_pred             ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCCCEEEE
Confidence            22111112234678899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCcc
Q 009109          231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQAC  310 (543)
Q Consensus       231 v~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C  310 (543)
                      ++|+.+.+..|++|++|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|
T Consensus       162 v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C  240 (426)
T cd07087         162 VEGGVEVATALLAEPFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKF-LNAGQTC  240 (426)
T ss_pred             EeCCchHHHHHHhCCCCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHH-hccCCcc
Confidence            999777889999989999999999999999999999999999999999999999999999999999999999 9999999


Q ss_pred             ccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCCceeeceE
Q 009109          311 IGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTI  390 (543)
Q Consensus       311 ~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~~Ptv  390 (543)
                      +++++||||++++|+|+++|+++++++++++|.+.+++||++++.+.+++.++++++    ++++||..+..|+|++|||
T Consensus       241 ~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a----~v~~gg~~~~~g~~~~Ptv  316 (426)
T cd07087         241 IAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDG----KVVIGGQVDKEERYIAPTI  316 (426)
T ss_pred             ccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcc----eEEeCCccCCCCCEEeeEE
Confidence            999999999999999999999999999988887788999999999999999999865    7899997755689999999


Q ss_pred             eeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCC
Q 009109          391 LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSL  470 (543)
Q Consensus       391 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~  470 (543)
                      +.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+++.+...+.+
T Consensus       317 l~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~  396 (426)
T cd07087         317 LDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNL  396 (426)
T ss_pred             EecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998755556889


Q ss_pred             CcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          471 PFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       471 pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      ||||+|.||+|+++|.+++++||+.|+++
T Consensus       397 PfGG~k~SG~G~~~g~~~l~~~~~~k~~~  425 (426)
T cd07087         397 PFGGVGNSGMGAYHGKAGFDTFSHLKSVL  425 (426)
T ss_pred             CCCCCCcccCCCccCHHHHHHhccceeec
Confidence            99999999999999999999999999874

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=4.8e-87  Score=754.85  Aligned_cols=447  Identities=22%  Similarity=0.361  Sum_probs=413.6

Q ss_pred             cccCCchh-hhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhH
Q 009109           48 CRCSATMA-AEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI  126 (543)
Q Consensus        48 ~~~p~tg~-~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~  126 (543)
                      +.||.|++ +++.+ +.++.+|+++|+++|++||+.|+.+|..+|+++|++++++|++++++|+.++++|+||++.++. 
T Consensus       566 v~nP~~~~~~vg~v-~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~~~a~-  643 (1038)
T PRK11904        566 VVSPADRRRVVGEV-AFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQDAI-  643 (1038)
T ss_pred             EECCCCCCeeEEEE-eCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-
Confidence            34888877 66655 9999999999999999999999999999999999999999999999999999999999999997 


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCC-CcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCC
Q 009109          127 SEISMTKSSCKLALKELKYWTKP-EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS  205 (543)
Q Consensus       127 ~Ev~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps  205 (543)
                      .|+..+++.++|++..++++... ...+   ...+..+++.++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus       644 ~EV~eaid~lr~ya~~a~~~~~~~~~l~---g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPs  720 (1038)
T PRK11904        644 AEVREAVDFCRYYAAQARRLFGAPEKLP---GPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPA  720 (1038)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCcccC---CCCCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCC
Confidence            59999999999999998887532 1111   1235678899999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcc---cCcEEEecCCC
Q 009109          206 EIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKH---LTPVILELGGK  279 (543)
Q Consensus       206 ~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~---~~~~~lelgG~  279 (543)
                      +.+|+++..+.+++.++ +|+|+||+|+| +.+.+..|+.|+ ++.|+||||+++|+.|.+.++.+   .+|+++|+|||
T Consensus       721 e~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGk  800 (1038)
T PRK11904        721 EQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQ  800 (1038)
T ss_pred             CcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCc
Confidence            99999999999999999 99999999999 556899999996 99999999999999999988865   78999999999


Q ss_pred             CcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHH
Q 009109          280 SPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFA  358 (543)
Q Consensus       280 ~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~  358 (543)
                      ||+||++|||++.|++.+++|+| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+|++.+++
T Consensus       801 Na~IV~~dAdld~Av~~iv~saF-~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~  879 (1038)
T PRK11904        801 NAMIVDSTALPEQVVDDVVTSAF-RSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKA  879 (1038)
T ss_pred             CeEEECCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHH
Confidence            99999999999999999999999 99999999999999999999999999999999999999987 77999999999999


Q ss_pred             HHHHHHHhhhcCCEEEECcccCC---CCceeeceEeeCCCCCCcccccccccceeeeeccC--CHHHHHHHHHcCCCCcE
Q 009109          359 RLASLLDEDKVSDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVE--KIEDSFDVIKSKPKPLA  433 (543)
Q Consensus       359 ~~~~~i~~a~~~~~v~~gg~~~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~  433 (543)
                      ++.++|+++.+++++++||..++   .|+|+.|||+..  +++.+++||+||||++|++|+  +++|||+++|+++|||+
T Consensus       880 ~l~~~I~~a~~ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt  957 (1038)
T PRK11904        880 NLDAHIERMKREARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLT  957 (1038)
T ss_pred             HHHHHHHHHHcCCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCE
Confidence            99999999888899999997643   489999999863  577889999999999999997  69999999999999999


Q ss_pred             EEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC-CcchHHHHHHhhhceEEEEec
Q 009109          434 AYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG-SYHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       434 a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~~~~~k~v~~~~  502 (543)
                      ++|||+|.+.++++++++++|+|+||+.+++...+.+||||+|.||+| +.+|++++++|++.|+|.++.
T Consensus       958 ~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904        958 LGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred             EEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEcc
Confidence            999999999999999999999999999887666677899999999999 678899999999999998754

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=100.00  E-value=5.3e-87  Score=705.57  Aligned_cols=441  Identities=15%  Similarity=0.197  Sum_probs=390.0

Q ss_pred             eeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhh--cCCCHHHH----HHHH
Q 009109           22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSR--KTKSYEWR----MSQI   95 (543)
Q Consensus        22 ~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w--~~~~~~~R----~~iL   95 (543)
                      +|||| +|+.+  +.+++++        ||.||++++.+ +.++.+|+++|+++|++||+.|  +.++..+|    .++|
T Consensus         1 ~~i~g-~~~~~--~~~~~~~--------nP~t~~~i~~~-~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il   68 (489)
T cd07126           1 NLVAG-KWKGA--SNYTTLL--------DPLNGDKFISV-PDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVS   68 (489)
T ss_pred             CcCCC-EEecC--CCcEEee--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHH
Confidence            48999 99875  3456665        88999999765 9999999999999999999998  56779999    8999


Q ss_pred             HHHHHHHHHh--HHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEE
Q 009109           96 QSIANMIEEK--EEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV  173 (543)
Q Consensus        96 ~~~a~~l~~~--~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  173 (543)
                      +++++.|+++  .++|++++++|+|||+.+++ .|+..+++.++++++...+...... ..+....+...+++++|+|||
T Consensus        69 ~~~a~~l~~~~~~~~la~~~~~e~GK~~~~a~-~Ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~v~r~P~GVV  146 (489)
T cd07126          69 HRVAHELRKPEVEDFFARLIQRVAPKSDAQAL-GEVVVTRKFLENFAGDQVRFLARSF-NVPGDHQGQQSSGYRWPYGPV  146 (489)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcee-ccCCCCCCceeEEEEecceEE
Confidence            9999999999  59999999999999999997 4999999999999988766543221 111112244678999999999


Q ss_pred             EEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEE
Q 009109          174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILY  251 (543)
Q Consensus       174 ~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~f  251 (543)
                      ++|+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+|+.+.+..|+.|+ +|+|+|
T Consensus       147 ~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~F  226 (489)
T cd07126         147 AIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLF  226 (489)
T ss_pred             EEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEE
Confidence            9999999999999999999999999999999999999999999999998 99999999999544466688774 999999


Q ss_pred             eCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCC-CHHHHHHHHHHhhcccCCCCccccCCEEEEeCCc-HHHHHHH
Q 009109          252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTI-NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDF-APKLIDS  329 (543)
Q Consensus       252 tGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~da-Dl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~  329 (543)
                      |||+++|+.|...++   +++.+|+||+||+||++|| |++.|++.+++++| .|+||.|++++|+|||+++ +|+|+++
T Consensus       227 TGS~~vGr~i~~~~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f-~naGQ~C~a~~rv~V~~~i~~d~f~~~  302 (489)
T cd07126         227 TGSSKVAERLALELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAY-ACSGQKCSAQSILFAHENWVQAGILDK  302 (489)
T ss_pred             ECCHHHHHHHHHHhC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHH-hcCCCcCCCCceEEEeCcchHHHHHHH
Confidence            999999999988776   5799999999999999999 99999999999999 9999999999999999995 6899999


Q ss_pred             HHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhh--cCCEEEECcccCC-----CC-ceeeceEeeC------CC
Q 009109          330 LRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK--VSDKIVYGGQRDE-----KQ-LKIAPTILLD------VP  395 (543)
Q Consensus       330 l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~--~~~~v~~gg~~~~-----~g-~~~~Ptvl~~------~~  395 (543)
                      |++.++++++|+    +++||++++. .+++.++++++.  +++++++||..+.     .+ .|++|||+..      ++
T Consensus       303 l~~~~~~~~~g~----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~  377 (489)
T cd07126         303 LKALAEQRKLED----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIE  377 (489)
T ss_pred             HHHHHHhcccCC----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCC
Confidence            999999998774    4799999998 899999999987  4679999997643     23 3899999852      67


Q ss_pred             CCCcccccccccceeeeeccCC--HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcccee--EEECCCcccCCCC--C
Q 009109          396 DDSTIMKEEIFGPLLPIVTVEK--IEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGG--IVFNDTIVHTTVS--S  469 (543)
Q Consensus       396 ~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~--v~iN~~~~~~~~~--~  469 (543)
                      ++|++++||+||||++|++|+|  ++|||+++|+++|||++||||+|.++++++++++++|.  |+||+.+.+....  .
T Consensus       378 ~~~~i~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~  457 (489)
T cd07126         378 ENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWF  457 (489)
T ss_pred             CCCHHHhCCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCc
Confidence            8999999999999999999999  99999999999999999999999999999999999999  6699887654322  2


Q ss_pred             CCcccCCCCCCCCcch
Q 009109          470 LPFGGVGESGMGSYHG  485 (543)
Q Consensus       470 ~pfGG~~~SG~G~~~g  485 (543)
                      +||||+|.||+|+.+.
T Consensus       458 ~pfgg~k~sg~g~~~~  473 (489)
T cd07126         458 GPAGDPRGAGIGTPEA  473 (489)
T ss_pred             CCCCCCcccCCCCHhH
Confidence            9999999999999754

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=100.00  E-value=8e-87  Score=705.52  Aligned_cols=424  Identities=26%  Similarity=0.423  Sum_probs=394.9

Q ss_pred             HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhc
Q 009109           68 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWT  147 (543)
Q Consensus        68 dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~  147 (543)
                      |+++++++|++|++.|++++..+|.++|+++++.|++++++|++++++|+||+..++.. |+..+++.+++++....+..
T Consensus         1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~~~   79 (431)
T cd07104           1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAF-EVGAAIAILREAAGLPRRPE   79 (431)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence            58999999999999999999999999999999999999999999999999999999975 99999999999998776542


Q ss_pred             CCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHH-HHHHHHHHhhh-cCC
Q 009109          148 KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPAT-SSLLAKLLEDY-VDN  225 (543)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~-~~~l~~~l~~a-lP~  225 (543)
                      . ....  ....+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.+ +..+.+++.++ +|+
T Consensus        80 ~-~~~~--~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~  156 (431)
T cd07104          80 G-EILP--SDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPK  156 (431)
T ss_pred             C-cccc--CCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCc
Confidence            2 1111  11134567889999999999999999999999999999999999999999999998 67899999999 999


Q ss_pred             CceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcc
Q 009109          226 SAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM  303 (543)
Q Consensus       226 gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~  303 (543)
                      |++|+++| +.+.+..|+.|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++| 
T Consensus       157 gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~-  235 (431)
T cd07104         157 GVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAF-  235 (431)
T ss_pred             ccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-
Confidence            99999998 456889999985 999999999999999999999999999999999999999999999999999999999 


Q ss_pred             cCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC
Q 009109          304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE  381 (543)
Q Consensus       304 ~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~  381 (543)
                      +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ .+++||++++.+++++.++++++.. ++++++||..  
T Consensus       236 ~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~--  313 (431)
T cd07104         236 LHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY--  313 (431)
T ss_pred             hcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC--
Confidence            99999999999999999999999999999999999999987 5789999999999999999998865 6799999865  


Q ss_pred             CCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCC
Q 009109          382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDT  461 (543)
Q Consensus       382 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~  461 (543)
                      .|+|++|||+.++++++++++||+||||++|++|+|+||||+++|++++||++||||+|.+.++++++++++|+|+||++
T Consensus       314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~  393 (431)
T cd07104         314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQ  393 (431)
T ss_pred             CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          462 IVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       462 ~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      +.+ ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       394 ~~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~  430 (431)
T cd07104         394 TVN-DEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT  430 (431)
T ss_pred             CCC-CCCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence            864 4578999999999999999999999999999985

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=100.00  E-value=1.3e-86  Score=692.52  Aligned_cols=400  Identities=25%  Similarity=0.405  Sum_probs=371.4

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEE
Q 009109           95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVL  174 (543)
Q Consensus        95 L~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~  174 (543)
                      |++++++|++++++|++++++|+|||+.++.. |+..+++.+++++...+.+.... ..  ....+...+++++|+|||+
T Consensus         1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~-~~--~~~~~~~~~~~~~P~Gvv~   76 (409)
T PRK10090          1 LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEI-IQ--SDRPGENILLFKRALGVTT   76 (409)
T ss_pred             CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcc-cC--CCCCCceeEEEEecccEEE
Confidence            57899999999999999999999999999984 99999999999998877654322 11  1112345788999999999


Q ss_pred             EEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEE
Q 009109          175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILY  251 (543)
Q Consensus       175 ~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~f  251 (543)
                      +|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+|+| +.+.+..|+.|+ +|+|+|
T Consensus        77 ~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~f  156 (409)
T PRK10090         77 GILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSM  156 (409)
T ss_pred             EECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEE
Confidence            999999999999999999999999999999999999999999999999 99999999999 667889999986 999999


Q ss_pred             eCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHH
Q 009109          252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR  331 (543)
Q Consensus       252 tGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~  331 (543)
                      |||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|+
T Consensus       157 tGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~  235 (409)
T PRK10090        157 TGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLG  235 (409)
T ss_pred             ECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEcHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCC--CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC-CCceeeceEeeCCCCCCccccccccc
Q 009109          332 NELKEFFGKNPME--SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFG  407 (543)
Q Consensus       332 ~~~~~l~~g~~~~--~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fg  407 (543)
                      ++++++++|||.+  ++++|||+++.++++++++++++.+ ++++++||.... .|+|++|||+.+++++|++++||+||
T Consensus       236 ~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~Fg  315 (409)
T PRK10090        236 EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFG  315 (409)
T ss_pred             HHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCC
Confidence            9999999999976  5689999999999999999999865 679999997643 58899999999999999999999999


Q ss_pred             ceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHH
Q 009109          408 PLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF  487 (543)
Q Consensus       408 Pvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~  487 (543)
                      ||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||+...+  .+..||||+|.||+|+++|.+
T Consensus       316 Pvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~  393 (409)
T PRK10090        316 PVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKH  393 (409)
T ss_pred             ceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccccCCccchHH
Confidence            999999999999999999999999999999999999999999999999999998764  345799999999999999999


Q ss_pred             HHHHhhhceEEEEe
Q 009109          488 SFDAFSHKKAVLYR  501 (543)
Q Consensus       488 ~~~~~~~~k~v~~~  501 (543)
                      |+++||+.|+++++
T Consensus       394 gl~~f~~~k~v~~~  407 (409)
T PRK10090        394 GLHEYLQTQVVYLQ  407 (409)
T ss_pred             HHHHhcceEEEEEe
Confidence            99999999999764

>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=7.1e-87  Score=639.31  Aligned_cols=505  Identities=27%  Similarity=0.423  Sum_probs=457.0

Q ss_pred             hhhc-ccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHH
Q 009109           11 DFST-GAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYE   89 (543)
Q Consensus        11 ~~~~-~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~   89 (543)
                      ||.+ ++++++..||+- .-+    |.  .-.++.+++|++|+||+.+|.. |.-++.|+|+-|..|++|+++|.+.+.+
T Consensus        37 ~~~~~~~~~~~n~~~~~-~~~----~~--~~~~~~~vqCycPatg~yLG~f-p~~~~tdide~v~la~kAQktW~~ssF~  108 (583)
T KOG2454|consen   37 DVLAHGKDTEENSFIYI-PPR----GR--SQQSDKKVQCYCPATGKYLGYF-PALSPTDIDERVTLARKAQKTWAQSSFK  108 (583)
T ss_pred             HhccCCCchhhcCeeec-CCC----CC--CcCCCCceEEecCCCcceeeec-ccCChhhHHHHHHHHHHHHhhhhhccHH
Confidence            5666 899999999987 211    11  1123456999999999999765 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeec
Q 009109           90 WRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEP  169 (543)
Q Consensus        90 ~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  169 (543)
                      .|.++|+.+.+.|-+|.|.+++..++||||+..++..+|+..+++.+.|.+.+.++|+++...+......-...++.++|
T Consensus       109 ~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yeP  188 (583)
T KOG2454|consen  109 LRRQFLRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEP  188 (583)
T ss_pred             HHHHHHHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEee
Confidence            99999999999999999999999999999999999999999999999999999999999886654444444578999999


Q ss_pred             ceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-----cCCCceEeecCChHHHHHHHhC
Q 009109          170 LGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-----VDNSAVRVVEGAVAETSALLEQ  244 (543)
Q Consensus       170 ~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-----lP~gvv~vv~g~~~~~~~L~~~  244 (543)
                      +||+..|.|||||+.+.+.++..||.+||++|+|-|+.+..+.....|+++.+     -|+++||++++-++.+++|++|
T Consensus       189 LGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh  268 (583)
T KOG2454|consen  189 LGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSH  268 (583)
T ss_pred             cceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcC
Confidence            99999999999999999999999999999999999999999998888887764     4999999999988999999999


Q ss_pred             C-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcH
Q 009109          245 K-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFA  323 (543)
Q Consensus       245 ~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~  323 (543)
                      + ++++.|.||..+++.|++.+++.++|+++|||||+++||++|||++..+.-+++|.| ..+||.|...+|++||+++|
T Consensus       269 ~g~khitFiGSqpvak~i~~~AAk~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtf-QSsGQNCiGiER~iv~k~~Y  347 (583)
T KOG2454|consen  269 SGVKHITFIGSQPVAKMIMRNAAKTLTPVTLELGGKDAFIICDDADLSHVASIAMRGTF-QSSGQNCIGIERFIVHKDIY  347 (583)
T ss_pred             CCcceEEEecCcHHHHHHHHhhhhhcCcEEEeecCcccEEEeccccHHHHHHHHHhhhh-hhcCCcccceeEEEEecchH
Confidence            6 999999999999999999999999999999999999999999999999999999999 99999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-----CCCCceeeceEeeCCCC
Q 009109          324 PKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-----DEKQLKIAPTILLDVPD  396 (543)
Q Consensus       324 ~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-----~~~g~~~~Ptvl~~~~~  396 (543)
                      |.|+..|.++++.++.|.|.. ..|||.|++..+++.+++++++|.. |+++++||.+     ...|.|++||+|.++++
T Consensus       348 d~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~  427 (583)
T KOG2454|consen  348 DAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTH  427 (583)
T ss_pred             HHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCc
Confidence            999999999999999998765 6799999999999999999999975 6799999975     24689999999999999


Q ss_pred             CCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCC
Q 009109          397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVG  476 (543)
Q Consensus       397 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~  476 (543)
                      +|.|++||.||||++++++++.|++++++|++++||.++||+.|..+++++++++++|.|.||+...++. -++||||+|
T Consensus       428 eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~-cQlPFGG~k  506 (583)
T KOG2454|consen  428 EMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYM-CQLPFGGVK  506 (583)
T ss_pred             hhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhhe-eccccCCcc
Confidence            9999999999999999999999999999999999999999999999999999999999999999877544 459999999


Q ss_pred             CCCCCCcchHHHHHHhhhceEEEEecC-----CCCCCCcCCCCChHH-HHHHHHH
Q 009109          477 ESGMGSYHGKFSFDAFSHKKAVLYRSF-----NGDSTTRYPPYTAEK-QKLLRAL  525 (543)
Q Consensus       477 ~SG~G~~~g~~~~~~~~~~k~v~~~~~-----~~~~~~~~~p~~~~~-~~~~~~~  525 (543)
                      .||+||+.|.+|++..+..|+|...++     ..+....||=|...| ...+|.|
T Consensus       507 ~SGyGrFaG~EGLrg~Cn~Ksv~yd~~~~~~t~ip~aldypi~~s~kaW~fvrsl  561 (583)
T KOG2454|consen  507 DSGYGRFAGIEGLRGCCNVKSVAYDRVAENATEIPEALDYPIYGSLKAWDFVRSL  561 (583)
T ss_pred             CCCccccccHHHHHHHhcccceeccchhhhhccCCccccccCcChhhHHHHHHHH
Confidence            999999999999999999999977653     245566777665333 3434443

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=6.1e-84  Score=734.75  Aligned_cols=431  Identities=20%  Similarity=0.324  Sum_probs=398.6

Q ss_pred             ccccCCc-hhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhh
Q 009109           47 SCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF  125 (543)
Q Consensus        47 ~~~~p~t-g~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~  125 (543)
                      .+.||.| +++++.+ +.++.+|+++|+++|++||+.|+.+|..+|+++|++++++|+++.++|+.++++|+||++.++.
T Consensus       662 ~v~nPa~~~~~vg~v-~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~~~A~  740 (1318)
T PRK11809        662 PVINPADPRDIVGYV-REATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSNAI  740 (1318)
T ss_pred             EeECCCCCCeeEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH
Confidence            3448887 6777666 8899999999999999999999999999999999999999999999999999999999999997


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCC
Q 009109          126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS  205 (543)
Q Consensus       126 ~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps  205 (543)
                       .||..++++++||+...+...               ....++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus       741 -~EV~eaidflryyA~~a~~~~---------------~~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPs  804 (1318)
T PRK11809        741 -AEVREAVDFLRYYAGQVRDDF---------------DNDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPA  804 (1318)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhc---------------CCceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCC
Confidence             499999999999998765421               1246899999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhccc------CcEEEec
Q 009109          206 EIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHL------TPVILEL  276 (543)
Q Consensus       206 ~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~------~~~~lel  276 (543)
                      +.+|+++..+++++.++ +|+|+||+|+| +.+.+..|+.|+ |+.|+||||+++|+.|.+.+++++      +|+++|+
T Consensus       805 eqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~~~pliaEl  884 (1318)
T PRK11809        805 EQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAET  884 (1318)
T ss_pred             CCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccCceeEEEec
Confidence            99999999999999999 99999999999 566899999996 999999999999999999998876      8999999


Q ss_pred             CCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHH
Q 009109          277 GGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPF  355 (543)
Q Consensus       277 gG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~  355 (543)
                      ||+||+||++|||++.|++.+++|+| .++||.|+++++||||++++|+|++.|+++++++++|||.+ ++++||+|++.
T Consensus       885 GGkNa~IVdsdAdle~Av~~iv~sAF-~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~~  963 (1318)
T PRK11809        885 GGQNAMIVDSSALTEQVVADVLASAF-DSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAE  963 (1318)
T ss_pred             CCccceEECCCCCHHHHHHHHHHHHH-hcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCHH
Confidence            99999999999999999999999999 99999999999999999999999999999999999999987 78999999999


Q ss_pred             HHHHHHHHHHhhhc-CCEEEECcccC----CCCceeeceEeeCCCCCCcccccccccceeeeeccC--CHHHHHHHHHcC
Q 009109          356 HFARLASLLDEDKV-SDKIVYGGQRD----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVE--KIEDSFDVIKSK  428 (543)
Q Consensus       356 ~~~~~~~~i~~a~~-~~~v~~gg~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~  428 (543)
                      +.+++.++|+++.+ +++++.||...    ..|+|++|||+..  +++.++++|+||||++|++|+  +++|+|+++|++
T Consensus       964 a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t 1041 (1318)
T PRK11809        964 AKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIEQINAS 1041 (1318)
T ss_pred             HHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhcC
Confidence            99999999999876 45777776442    3599999999974  567889999999999999996  799999999999


Q ss_pred             CCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCC-cchHHHHHHhhhceE
Q 009109          429 PKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGS-YHGKFSFDAFSHKKA  497 (543)
Q Consensus       429 ~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~~~~~k~  497 (543)
                      +|||+++|||+|.+.++++++++++|+|+||....+...+.+||||+|.||+|. .+|++++..|+..+.
T Consensus      1042 ~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809       1042 GYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred             CCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence            999999999999999999999999999999998776555678999999999994 689999999999874

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=1.6e-83  Score=733.67  Aligned_cols=436  Identities=21%  Similarity=0.342  Sum_probs=402.2

Q ss_pred             ccccCCc-hhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhh
Q 009109           47 SCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF  125 (543)
Q Consensus        47 ~~~~p~t-g~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~  125 (543)
                      .++||.| +++++.+ +.++.+|+++|+++|++||+.|+.++..+|+++|++++++|++++++|++++++|+||++.++.
T Consensus       570 ~v~nP~~~~~~vg~v-~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~~ea~  648 (1208)
T PRK11905        570 PVLNPADHDDVVGTV-TEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLANAI  648 (1208)
T ss_pred             eEECCCCCCceEEEE-eCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence            3448888 8888766 8999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCC
Q 009109          126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS  205 (543)
Q Consensus       126 ~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps  205 (543)
                       .|+..+++.++|++...+.+..               ...++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus       649 -~Ev~eaid~lr~ya~~a~~~~~---------------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPs  712 (1208)
T PRK11905        649 -AEVREAVDFLRYYAAQARRLLN---------------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPA  712 (1208)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcC---------------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCC
Confidence             5999999999999988766421               135689999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcc---cCcEEEecCCC
Q 009109          206 EIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKH---LTPVILELGGK  279 (543)
Q Consensus       206 ~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~---~~~~~lelgG~  279 (543)
                      +.+|+++..+.+++.++ +|+|+||+|+| +.+.+..|++|+ |+.|+||||+++|+.|.+.++++   .+|+++|+|||
T Consensus       713 e~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGk  792 (1208)
T PRK11905        713 EQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQ  792 (1208)
T ss_pred             cccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCc
Confidence            99999999999999999 99999999999 556899999996 99999999999999999998876   48999999999


Q ss_pred             CcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHH
Q 009109          280 SPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFA  358 (543)
Q Consensus       280 ~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~  358 (543)
                      ||+||++|||++.|++.+++++| .++||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+|++.+++
T Consensus       793 N~~IV~~dAdle~Av~~iv~saF-~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~  871 (1208)
T PRK11905        793 NAMIVDSSALPEQVVADVIASAF-DSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQA  871 (1208)
T ss_pred             CeEEEcCCCCHHHHHHHHHHHHH-hcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCccCHHHHH
Confidence            99999999999999999999999 99999999999999999999999999999999999999987 78999999999999


Q ss_pred             HHHHHHHhhhcCC-EEEECcccC--CCCceeeceEeeCCCCCCcccccccccceeeeeccC--CHHHHHHHHHcCCCCcE
Q 009109          359 RLASLLDEDKVSD-KIVYGGQRD--EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVE--KIEDSFDVIKSKPKPLA  433 (543)
Q Consensus       359 ~~~~~i~~a~~~~-~v~~gg~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~  433 (543)
                      ++.++|+++.+.+ .++.|+...  ..|+|+.|||+..  +++.++++|+||||++|++|+  +++|+|+++|+++|||+
T Consensus       872 ~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt  949 (1208)
T PRK11905        872 NIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLT  949 (1208)
T ss_pred             HHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCce
Confidence            9999999988765 455544322  3689999999973  578899999999999999997  69999999999999999


Q ss_pred             EEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCC-cchHHHHHHhhhceEEEEec
Q 009109          434 AYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGS-YHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       434 a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~~~~~k~v~~~~  502 (543)
                      ++|||+|.+.++++.+++++|+|+||+.+++...+.+||||+|.||+|. .+|++++++|++.|++.+..
T Consensus       950 ~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~~ 1019 (1208)
T PRK11905        950 FGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIPP 1019 (1208)
T ss_pred             EEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeeccc
Confidence            9999999999999999999999999998876666778999999999995 78999999999999987643

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=100.00  E-value=2.1e-80  Score=656.77  Aligned_cols=417  Identities=19%  Similarity=0.283  Sum_probs=370.0

Q ss_pred             HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhh--h
Q 009109           69 AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY--W  146 (543)
Q Consensus        69 v~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~--~  146 (543)
                      +++|+++|++||+.|++++..+|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..+++  |
T Consensus         1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~~~   79 (454)
T cd07129           1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREGSW   79 (454)
T ss_pred             ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999999999999999999999999887 5999999999999987764  2


Q ss_pred             cCCCcccccC---cCCCCcceEEeecceEEEEEcCCchhhhh--hhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHh-
Q 009109          147 TKPEKAKTSL---TTYPSSAEIISEPLGVVLVISTWNYPFLL--SLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE-  220 (543)
Q Consensus       147 ~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~--~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~-  220 (543)
                      ..........   ...+...+++++|+|||++|+|||||+.+  .++++++||++||+||+|||+.+|.++.++++++. 
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~  159 (454)
T cd07129          80 LDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRA  159 (454)
T ss_pred             ccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHH
Confidence            2211100000   01123457899999999999999999988  45899999999999999999999999999988875 


Q ss_pred             ---hh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhc--ccCcEEEecCCCCcEEEcCCC---C
Q 009109          221 ---DY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAK--HLTPVILELGGKSPAVVDSTI---N  289 (543)
Q Consensus       221 ---~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~--~~~~~~lelgG~~p~iV~~da---D  289 (543)
                         ++ +|+|+||+|+| +.+.+..|++|+ +|.|+||||+.+|+.|++.+++  +++|+++|+|||||+||++||   |
T Consensus       160 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~d  239 (454)
T cd07129         160 ALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAER  239 (454)
T ss_pred             HHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHH
Confidence               66 99999999999 557899999997 9999999999999999999998  699999999999999999999   8


Q ss_pred             HHHHHHHHHHhhcccCCCCccccCCEEEEeCC-cHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhh
Q 009109          290 LQVTTRRIIAGKWMANNGQACIGVDYIITTKD-FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK  368 (543)
Q Consensus       290 l~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~  368 (543)
                      ++.|++.+++++| .|+||.|++++|||||++ ++|+|+++|+++++++++         ||++++.+.++..++++++.
T Consensus       240 l~~aa~~i~~~~~-~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~---------g~~~~~~~~~~~~~~i~~a~  309 (454)
T cd07129         240 GEAIAQGFVGSLT-LGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA---------QTMLTPGIAEAYRQGVEALA  309 (454)
T ss_pred             HHHHHHHHHHHHh-cCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC---------CCCcChHHHHHHHHHHHHHH
Confidence            9999999999999 999999999999999999 999999999999998874         46677777777777887775


Q ss_pred             c--CCEEEECcccCCCCceeeceEeeCCC---CCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCC--H
Q 009109          369 V--SDKIVYGGQRDEKQLKIAPTILLDVP---DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD--E  441 (543)
Q Consensus       369 ~--~~~v~~gg~~~~~g~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d--~  441 (543)
                      +  ++++++||....+|+|++|||+...+   ++|++++||+||||++|++|+|.+|||+++|+++|||++||||+|  .
T Consensus       310 ~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~  389 (454)
T cd07129         310 AAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDL  389 (454)
T ss_pred             hcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchH
Confidence            4  57999999765568999999998665   689999999999999999999999999999999999999999999  7


Q ss_pred             HHHHHHHhhc--cceeEEECCCcccCC-CCCCCccc-CCCCCCCCc--chHHHHHHhhhce
Q 009109          442 QMKKEFVQNI--SAGGIVFNDTIVHTT-VSSLPFGG-VGESGMGSY--HGKFSFDAFSHKK  496 (543)
Q Consensus       442 ~~~~~~~~~l--~~G~v~iN~~~~~~~-~~~~pfGG-~~~SG~G~~--~g~~~~~~~~~~k  496 (543)
                      +.++++++++  ++|+|+||+++.+.. .+.+|||| +|.||.|++  +|.+++++|+++-
T Consensus       390 ~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~~  450 (454)
T cd07129         390 ALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRPV  450 (454)
T ss_pred             HHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhcccc
Confidence            9999999999  699999998765332 25899999 999999999  7999999999863

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=100.00  E-value=3.7e-80  Score=652.12  Aligned_cols=418  Identities=18%  Similarity=0.221  Sum_probs=369.7

Q ss_pred             HHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhc-C
Q 009109           70 ASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWT-K  148 (543)
Q Consensus        70 ~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~-~  148 (543)
                      ++|+++|++||+.|++++..+|.++|++++++|++++++|++++++|+|||. ++. .|+..+++.+++++.....+. .
T Consensus         2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~~~   79 (442)
T cd07084           2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYRIP   79 (442)
T ss_pred             hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcccc
Confidence            6799999999999999999999999999999999999999999999999999 665 499999999999988776531 1


Q ss_pred             CCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-c-CCC
Q 009109          149 PEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V-DNS  226 (543)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-l-P~g  226 (543)
                      ...........+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++ + |+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g  159 (442)
T cd07084          80 HEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPE  159 (442)
T ss_pred             ccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCcc
Confidence            11111111111345688999999999999999999999999999999999999999999999999999999998 6 999


Q ss_pred             ceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCC-CHHHHHHHHHHhhccc
Q 009109          227 AVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTI-NLQVTTRRIIAGKWMA  304 (543)
Q Consensus       227 vv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~da-Dl~~aa~~iv~~~~~~  304 (543)
                      ++|+++|+.+.+..|+.|+ +|+|+||||+++|+.|++.++.  +|+++|+|||||+||++|| |++.|++.+++++| .
T Consensus       160 ~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~-~  236 (442)
T cd07084         160 DVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMT-A  236 (442)
T ss_pred             ceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHh-c
Confidence            9999999655889999996 9999999999999999998875  8999999999999999999 69999999999999 9


Q ss_pred             CCCCccccCCEEEEeCC-cHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccC---
Q 009109          305 NNGQACIGVDYIITTKD-FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD---  380 (543)
Q Consensus       305 ~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~---  380 (543)
                      |+||.|++++|||||++ ++++|+++|+++++++++|    ++++||++++...+++.+.+++  .++++++||...   
T Consensus       237 ~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g----~~~~gpl~~~~~~~~i~~a~~~--gga~~~~gg~~~~~~  310 (442)
T cd07084         237 CSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE----DLLLGPVQTFTTLAMIAHMENL--LGSVLLFSGKELKNH  310 (442)
T ss_pred             ccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC----ccccChhhhHHHHHHHHHHHhc--CCcEEEeCCcccccC
Confidence            99999999999999999 9999999999999999988    6789999876555554444321  136899998652   


Q ss_pred             ----CCCceeeceEeeCCCCCC---cccccccccceeeeeccCC--HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc
Q 009109          381 ----EKQLKIAPTILLDVPDDS---TIMKEEIFGPLLPIVTVEK--IEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI  451 (543)
Q Consensus       381 ----~~g~~~~Ptvl~~~~~~~---~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l  451 (543)
                          ..|+|++|||+.+++++|   ++++||+||||++|++|+|  ++||++++|+++|||++||||+|.+.++++++++
T Consensus       311 ~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l  390 (442)
T cd07084         311 SIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNL  390 (442)
T ss_pred             CCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHH
Confidence                148999999999999997   9999999999999999999  9999999999999999999999999999999999


Q ss_pred             -cceeEEECCCcccCCCCCCCccc-CCCCCCCCcc-hHHHHHHhhhceEE
Q 009109          452 -SAGGIVFNDTIVHTTVSSLPFGG-VGESGMGSYH-GKFSFDAFSHKKAV  498 (543)
Q Consensus       452 -~~G~v~iN~~~~~~~~~~~pfGG-~~~SG~G~~~-g~~~~~~~~~~k~v  498 (543)
                       ++|+|+||+.......+..|||| .|.||+|++. |.+++++|++...+
T Consensus       391 ~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~  440 (442)
T cd07084         391 WVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE  440 (442)
T ss_pred             HhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence             99999999773334556678876 8899999986 99999999987654

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=100.00  E-value=7.2e-79  Score=645.72  Aligned_cols=424  Identities=30%  Similarity=0.495  Sum_probs=396.9

Q ss_pred             HHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCC
Q 009109           70 ASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKP  149 (543)
Q Consensus        70 ~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~  149 (543)
                      ++++++|++|++.|+.++.++|.++|+++++.|.++.++|+++++.|+||+..++. .|+..+++.+++++...+++.+.
T Consensus         1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~-~ei~~~i~~l~~~~~~~~~~~~~   79 (432)
T cd07078           1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLHGE   79 (432)
T ss_pred             CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc
Confidence            36899999999999999999999999999999999999999999999999988776 59999999999999888887654


Q ss_pred             CcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCce
Q 009109          150 EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAV  228 (543)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv  228 (543)
                      ..   .....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++ +|++++
T Consensus        80 ~~---~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~  156 (432)
T cd07078          80 VI---PSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVL  156 (432)
T ss_pred             cc---cccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcE
Confidence            42   11123556788999999999999999999999999999999999999999999999999999999999 899999


Q ss_pred             EeecCCh-HHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCC
Q 009109          229 RVVEGAV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANN  306 (543)
Q Consensus       229 ~vv~g~~-~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~  306 (543)
                      ++++|+. +.+..|+.|+ +|.|.||||.++++.|.+.++++++|+++|+||+||+||++|+|++.|++.|++++| .++
T Consensus       157 ~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~-~~~  235 (432)
T cd07078         157 NVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAF-GNA  235 (432)
T ss_pred             EEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hcc
Confidence            9999854 4788899986 899999999999999999999999999999999999999999999999999999999 999


Q ss_pred             CCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC--C
Q 009109          307 GQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE--K  382 (543)
Q Consensus       307 Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~--~  382 (543)
                      ||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+.+++.++++++.+ ++++++||....  .
T Consensus       236 Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~  315 (432)
T cd07078         236 GQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGK  315 (432)
T ss_pred             CCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCC
Confidence            99999999999999999999999999999999999966 7789999999999999999998864 679999987654  4


Q ss_pred             CceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCc
Q 009109          383 QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTI  462 (543)
Q Consensus       383 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~  462 (543)
                      |+|++|||+.+++++++++++|+||||++|++|++++|||+++|+.++||++||||+|.+.++++++++++|+|+||+++
T Consensus       316 g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~  395 (432)
T cd07078         316 GYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYS  395 (432)
T ss_pred             CcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          463 VHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       463 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      .+ ..+.+||||.|.||+|+++|++++++|++.|+|+
T Consensus       396 ~~-~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~  431 (432)
T cd07078         396 VG-AEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT  431 (432)
T ss_pred             CC-CCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence            75 6789999999999999999999999999999875

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=100.00  E-value=2.5e-78  Score=643.58  Aligned_cols=432  Identities=17%  Similarity=0.215  Sum_probs=365.0

Q ss_pred             cCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhH-H-
Q 009109           50 CSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI-S-  127 (543)
Q Consensus        50 ~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~-~-  127 (543)
                      ||.||++++++ +.++.   ++++++|++||+.|+++++.+|.++|++++++|+++.++|++++++|+|||+.++.. + 
T Consensus        71 ~P~t~~~~~~~-~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gk  146 (551)
T TIGR02288        71 SPYGVELGVTY-PQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGG  146 (551)
T ss_pred             CCCCCCEEEEE-cCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccC
Confidence            89999998666 77774   899999999999999999999999999999999999999999999999999987741 1 


Q ss_pred             --HHHHHHHHHHHHHHHHhhhcCCCcc--ccc-CcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEE
Q 009109          128 --EISMTKSSCKLALKELKYWTKPEKA--KTS-LTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL  202 (543)
Q Consensus       128 --Ev~~~~~~l~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVl  202 (543)
                        ++.+.++.+++++....++.+....  ... ........++.++|+|||++|+|||||+++.++++++||++||+||+
T Consensus       147 p~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVl  226 (551)
T TIGR02288       147 PHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLV  226 (551)
T ss_pred             hHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEE
Confidence              6778899999998887765432110  000 00011123457999999999999999999999999999999999999


Q ss_pred             eCCCCChHHHH----HHHHHHhhh-cCCCceEeecC--ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEE
Q 009109          203 KPSEIAPATSS----LLAKLLEDY-VDNSAVRVVEG--AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVIL  274 (543)
Q Consensus       203 Kps~~~p~~~~----~l~~~l~~a-lP~gvv~vv~g--~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~l  274 (543)
                      |||+.+|+++.    ++.+++.++ +|+|+||+|+|  +.+.++.|+.|+ |+.|.||||+++|+.|++.++  .+++++
T Consensus       227 KPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v~l  304 (551)
T TIGR02288       227 KPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQVYT  304 (551)
T ss_pred             ECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcEEe
Confidence            99999999655    667899998 99999999998  457899999996 999999999999999999876  489999


Q ss_pred             ecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCC---------cHHHHHHHHHHHHHhhcCCCCCC-
Q 009109          275 ELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD---------FAPKLIDSLRNELKEFFGKNPME-  344 (543)
Q Consensus       275 elgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~---------i~~~f~~~l~~~~~~l~~g~~~~-  344 (543)
                      |+|||||+||++|||++.+++.+++++| .|+||.|++++|||||++         +||+|+++|+++++++ +|||.+ 
T Consensus       305 ElGGknp~IV~~dADld~aa~~i~~~~f-~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~  382 (551)
T TIGR02288       305 EKAGVNTVIIESTDDYKAMLRNLAFSLS-LYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARA  382 (551)
T ss_pred             ecCCcCeEEEcCCCCHHHHHHHHHHHHH-hhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCcccc
Confidence            9999999999999999999999999999 999999999999999999         7999999999999999 899876 


Q ss_pred             CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccC---C-CC-ceeeceEeeCCCCCCcccccccccceeeeeccCCHH
Q 009109          345 SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD---E-KQ-LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIE  419 (543)
Q Consensus       345 ~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~---~-~g-~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~  419 (543)
                      .+++||++++.+++++.+    +.+.+++++||...   . .| +|++|||+...+++|++++||+||||++|++|+|.|
T Consensus       383 ~~~~Gplis~~~~~ri~~----a~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~d  458 (551)
T TIGR02288       383 TAVLGAIQSPDTLARIAE----ARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGA  458 (551)
T ss_pred             cccccCcCCHHHHHHHHH----HHhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHH
Confidence            678999999999999644    44445777777542   1 35 588999995444599999999999999999999999


Q ss_pred             HHHHHHHcC--CCC-cEEEEecCCHHHHHHHHhhc----------cceeEEECCCcccCCCCCCCcccCCCCCCCCcch-
Q 009109          420 DSFDVIKSK--PKP-LAAYFFSDDEQMKKEFVQNI----------SAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG-  485 (543)
Q Consensus       420 eai~~~n~~--~~g-l~a~i~t~d~~~~~~~~~~l----------~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g-  485 (543)
                      |||+++|++  +|| |++||||+|.+.++++.+++          ++|.|+||+        ..||++.+.||.....| 
T Consensus       459 eAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~--------~~~~~~~~~sg~n~~a~~  530 (551)
T TIGR02288       459 HAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQ--------SAAFSDFHGTGGNPAANA  530 (551)
T ss_pred             HHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEcc--------CCCCCCCCCCCCCCccCC
Confidence            999999998  566 99999999999999999998          666666664        34688888888875444 


Q ss_pred             HHHHHHhhhceEEEEe
Q 009109          486 KFSFDAFSHKKAVLYR  501 (543)
Q Consensus       486 ~~~~~~~~~~k~v~~~  501 (543)
                      .+.--.|...+...++
T Consensus       531 ~~~~~~~~~~r~~~~~  546 (551)
T TIGR02288       531 SLSDGAFVANRFRVVQ  546 (551)
T ss_pred             cccchhhhhcceEEEE
Confidence            3444556655544433

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=100.00  E-value=4e-79  Score=639.37  Aligned_cols=399  Identities=19%  Similarity=0.261  Sum_probs=345.3

Q ss_pred             HHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhh
Q 009109           66 VEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY  145 (543)
Q Consensus        66 ~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~  145 (543)
                      -+|+++|+++|++||+.|++++..+|.++|++++++|+++.++|++++++|+|||..++..       +.++++++....
T Consensus         3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~-------~~~~~~~~~~~~   75 (429)
T cd07121           3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDKI-------AKNHLAAEKTPG   75 (429)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH-------HHHHHHHHhcCc
Confidence            3689999999999999999999999999999999999999999999999999999877642       445555442211


Q ss_pred             hcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHh----h
Q 009109          146 WTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----D  221 (543)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~----~  221 (543)
                      ..  ..........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++++    +
T Consensus        76 ~~--~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~  153 (429)
T cd07121          76 TE--DLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAE  153 (429)
T ss_pred             cc--ccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHH
Confidence            10  00000001122345788999999999999999999999999999999999999999999999999999885    5


Q ss_pred             h-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHH
Q 009109          222 Y-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRII  298 (543)
Q Consensus       222 a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv  298 (543)
                      + +|+|+||+++| +.+.+..|++|+ ||.|+||||+++|+.|++.    .+|+++|+|||||+||++|||++.|++.|+
T Consensus       154 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~  229 (429)
T cd07121         154 AGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIV  229 (429)
T ss_pred             cCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHH
Confidence            5 89999999998 667899999997 9999999999999999875    599999999999999999999999999999


Q ss_pred             HhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcC---CEEEE
Q 009109          299 AGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVS---DKIVY  375 (543)
Q Consensus       299 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~---~~v~~  375 (543)
                      +++| +|+||.|++++|||||+++||+|+++|+++ .             .+++++.+.+++.++++++.++   +++++
T Consensus       230 ~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~-------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~  294 (429)
T cd07121         230 QGAS-FDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G-------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWV  294 (429)
T ss_pred             hccc-ccCCCCCCccceEEEeHHHHHHHHHHHHHC-C-------------CEEcCHHHHHHHHHhhcccCCCcccccccc
Confidence            9999 999999999999999999999999999886 1             1478999999999999988753   68888


Q ss_pred             Cccc----CCCCceee---ceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCc--EEEEecCCHHHHHH
Q 009109          376 GGQR----DEKQLKIA---PTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL--AAYFFSDDEQMKKE  446 (543)
Q Consensus       376 gg~~----~~~g~~~~---Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~a~i~t~d~~~~~~  446 (543)
                      ||..    +..|.|++   |||+.+++++|++++||+||||++|++|+|+||||+++|+++|||  +++|||+|.+++++
T Consensus       295 gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~  374 (429)
T cd07121         295 GKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTK  374 (429)
T ss_pred             CcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHH
Confidence            8753    12477877   499999999999999999999999999999999999999999998  99999999999999


Q ss_pred             HHhhccceeEEECCCcccCCCCCCCcccCCCCCC--CCcchHHHHHHhhhceEEEE
Q 009109          447 FVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM--GSYHGKFSFDAFSHKKAVLY  500 (543)
Q Consensus       447 ~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~--G~~~g~~~~~~~~~~k~v~~  500 (543)
                      +++++++|+|+||+++.    +.+||||+|.|++  |..-| +|+   +..|+++.
T Consensus       375 ~a~~l~aG~v~iN~~~~----~~~p~gG~k~s~~~~~~~~~-~~~---~~~~~~~~  422 (429)
T cd07121         375 MARAMQTTIFVKNGPSY----AGLGVGGEGYTTFTIAGPTG-EGL---TSARTFTR  422 (429)
T ss_pred             HHhhCCceEEEEcCCCc----CccccCCCccceEEecCCcC-cCc---cChhhhhe
Confidence            99999999999997643    6789999999998  54444 333   55555543

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=100.00  E-value=5.1e-78  Score=630.63  Aligned_cols=404  Identities=15%  Similarity=0.182  Sum_probs=343.0

Q ss_pred             HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHH--HHHHHHHHhhh
Q 009109           69 AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSS--CKLALKELKYW  146 (543)
Q Consensus        69 v~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~--l~~~~~~~~~~  146 (543)
                      +++|+++|++||+.|+++|+.+|.++|++++++|++++++|++++++|+|||+.+++. ++..++..  .++++.    .
T Consensus         1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~~~~~~~----~   75 (439)
T cd07081           1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYIYNVYKD----E   75 (439)
T ss_pred             CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHhc----c
Confidence            4789999999999999999999999999999999999999999999999999999874 55544432  122111    1


Q ss_pred             cCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHh----hh
Q 009109          147 TKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----DY  222 (543)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~----~a  222 (543)
                      ......   ....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.    ++
T Consensus        76 ~~~~~~---~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~a  152 (439)
T cd07081          76 KTCGVL---TGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAA  152 (439)
T ss_pred             ccCcee---cCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHc
Confidence            111111   11123446889999999999999999999999999999999999999999999999999888885    55


Q ss_pred             -cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHH
Q 009109          223 -VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIA  299 (543)
Q Consensus       223 -lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~  299 (543)
                       +|+|+||+|+| +.+.++.|++|+ ||+|.||||++    +++.+++++||+++|+|||||+||++|||++.|++.+++
T Consensus       153 G~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~  228 (439)
T cd07081         153 GAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVK  228 (439)
T ss_pred             CCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHH
Confidence             99999999998 667899999997 99999999987    567788899999999999999999999999999999999


Q ss_pred             hhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECccc
Q 009109          300 GKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQR  379 (543)
Q Consensus       300 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~  379 (543)
                      ++| +|+||.|++.+|+|||+++||+|+++|+++              +||+++..+++++.++|+++...+..+.||..
T Consensus       229 ~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~  293 (439)
T cd07081         229 SKT-FDNGVICASEQSVIVVDSVYDEVMRLFEGQ--------------GAYKLTAEELQQVQPVILKNGDVNRDIVGQDA  293 (439)
T ss_pred             HHh-cCCCCCCCCCCEEEEcHHHHHHHHHHHHHc--------------CCccCCHHHHHHHHHHHHhcCCcCCcccCCCH
Confidence            999 999999999999999999999999999887              37999999999999999988764434455532


Q ss_pred             ----CCCCceeece---EeeCCC--CCCcccccccccceeeeeccCCHHHHHHHHHcC----CCCcEEEEecCC---HHH
Q 009109          380 ----DEKQLKIAPT---ILLDVP--DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSK----PKPLAAYFFSDD---EQM  443 (543)
Q Consensus       380 ----~~~g~~~~Pt---vl~~~~--~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~a~i~t~d---~~~  443 (543)
                          ...|+|++||   ++.+++  ++|++++||+||||++|++|+|+||||+++|++    +|||+++|||+|   .++
T Consensus       294 ~~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~  373 (439)
T cd07081         294 YKIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIEN  373 (439)
T ss_pred             HHHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHH
Confidence                1358899998   998888  999999999999999999999999999999965    899999999999   999


Q ss_pred             HHHHHhhccceeEEECCCc-ccCCCCCCCcccCCCC--CCCCcchHH-----HHHHhhhceEEE
Q 009109          444 KKEFVQNISAGGIVFNDTI-VHTTVSSLPFGGVGES--GMGSYHGKF-----SFDAFSHKKAVL  499 (543)
Q Consensus       444 ~~~~~~~l~~G~v~iN~~~-~~~~~~~~pfGG~~~S--G~G~~~g~~-----~~~~~~~~k~v~  499 (543)
                      ++++++++++|.|+||+++ +.......-|||...+  |+|.++|..     +.++|++.|.|.
T Consensus       374 a~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (439)
T cd07081         374 MNQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVA  437 (439)
T ss_pred             HHHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeee
Confidence            9999999999999999876 3223333446666654  667766654     355666666554

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=100.00  E-value=1.2e-77  Score=633.06  Aligned_cols=404  Identities=18%  Similarity=0.232  Sum_probs=349.5

Q ss_pred             CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHH
Q 009109           63 RFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE  142 (543)
Q Consensus        63 ~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~  142 (543)
                      +...+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+||+..+++.       ..++++++.
T Consensus        32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~~  104 (465)
T PRK15398         32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAEK  104 (465)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHHH
Confidence            3678999999999999999999999999999999999999999999999999999999988764       234555444


Q ss_pred             Hh--hhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHh
Q 009109          143 LK--YWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE  220 (543)
Q Consensus       143 ~~--~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~  220 (543)
                      ..  .+....    .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++++
T Consensus       105 ~~~~~~~~~~----~~~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~  180 (465)
T PRK15398        105 TPGVEDLTTE----ALTGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLN  180 (465)
T ss_pred             hccccccccC----cccCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHH
Confidence            32  111111    011123456788999999999999999999999999999999999999999999999999999987


Q ss_pred             ----hh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHH
Q 009109          221 ----DY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVT  293 (543)
Q Consensus       221 ----~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~a  293 (543)
                          ++ +|+|++|+++| +.+.+..|++|+ ||+|+||||+++|+.|++    .++|+++|+|||||+||++|||++.|
T Consensus       181 ~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~A  256 (465)
T PRK15398        181 EAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKA  256 (465)
T ss_pred             HHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHH
Confidence                45 89999999998 678899999997 999999999999999988    36999999999999999999999999


Q ss_pred             HHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhh-cCCE
Q 009109          294 TRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK-VSDK  372 (543)
Q Consensus       294 a~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~  372 (543)
                      ++.|++++| +|+||.|++++|||||+++||+|+++|+++              .+|++++.+++++.++++++. ++++
T Consensus       257 a~~i~~g~~-~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~--------------~~~li~~~~~~~v~~~l~~~~~~~~~  321 (465)
T PRK15398        257 ARDIVKGAS-FDNNLPCIAEKEVIVVDSVADELMRLMEKN--------------GAVLLTAEQAEKLQKVVLKNGGTVNK  321 (465)
T ss_pred             HHHHHHhcc-cCCCCcCCCCceEEEeHHHHHHHHHHHHHc--------------CCccCCHHHHHHHHHHHhhcccccch
Confidence            999999999 999999999999999999999999999986              127899999999999998654 2346


Q ss_pred             EEECccc----CCCCcee---eceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCc--EEEEecCCHHH
Q 009109          373 IVYGGQR----DEKQLKI---APTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL--AAYFFSDDEQM  443 (543)
Q Consensus       373 v~~gg~~----~~~g~~~---~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~a~i~t~d~~~  443 (543)
                      ++.||..    ...|+++   +|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||  ++||||+|.+.
T Consensus       322 ~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~  401 (465)
T PRK15398        322 KWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDN  401 (465)
T ss_pred             hhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHH
Confidence            7777542    1246666   4799999999999999999999999999999999999999999988  99999999999


Q ss_pred             HHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEec
Q 009109          444 KKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       444 ~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~  502 (543)
                      ++++++++++|+|+||++..    +++||||+|.|.+-- +|+.| ...|..|++..++
T Consensus       402 a~~~a~~l~~G~V~iN~~~~----~~~p~gg~~~s~~~~-~~~~g-~~~~~~~~~~~~~  454 (465)
T PRK15398        402 LNKMARAIQTSIFVKNGPSY----AGLGLGGEGFTTFTI-ATPTG-EGVTSARTFTRRR  454 (465)
T ss_pred             HHHHHHhCCceEEEECCCCc----cccCcCCCCCceeee-cccCC-CCccchhhhhhhe
Confidence            99999999999999997642    678999999998521 25666 6666666665543

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=100.00  E-value=1.4e-76  Score=631.86  Aligned_cols=441  Identities=18%  Similarity=0.215  Sum_probs=374.4

Q ss_pred             ccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhH--
Q 009109           49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI--  126 (543)
Q Consensus        49 ~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~--  126 (543)
                      .+|.|+++++++ +.+   |++.+|++|++|++.|+++++.+|.++|++++++|++++++|++++++|+||++.++..  
T Consensus        70 ~~P~~~~l~~~~-~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~a~qa~  145 (549)
T cd07127          70 VSPYGVELGVTY-PQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMMAFQAG  145 (549)
T ss_pred             ECCCCCcEEEEE-chH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHHHHhcc
Confidence            388888876544 444   99999999999999999999999999999999999999999999999999999987752  


Q ss_pred             --HHHHHHHHHHHHHHHHHhhhcCCCccccc-Cc--CCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEE
Q 009109          127 --SEISMTKSSCKLALKELKYWTKPEKAKTS-LT--TYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV  201 (543)
Q Consensus       127 --~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VV  201 (543)
                        .|+.++++.++|+++.+.++........+ ..  ........+++|+||+++|+|||||+++.+.++++||++||+||
T Consensus       146 ~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VV  225 (549)
T cd07127         146 GPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVI  225 (549)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEE
Confidence              17999999999999887765332110000 00  01112245789999999999999999999999999999999999


Q ss_pred             EeCCCCChHHHH----HHHHHHhhh-cCCCceEeecCC--hHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEE
Q 009109          202 LKPSEIAPATSS----LLAKLLEDY-VDNSAVRVVEGA--VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVI  273 (543)
Q Consensus       202 lKps~~~p~~~~----~l~~~l~~a-lP~gvv~vv~g~--~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~  273 (543)
                      +|||+.+|+++.    .+.++|.++ +|+|+||+|+|+  .+.+..|+.|+ ++.|.||||+++|+.|.+.++.  +|++
T Consensus       226 vKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~~--~~v~  303 (549)
T cd07127         226 VKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQ--AQVY  303 (549)
T ss_pred             EECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhcc--CcEE
Confidence            999999998764    566889898 999999999983  57899999996 9999999999999999999874  8999


Q ss_pred             EecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCC---------cHHHHHHHHHHHHHhhcCCCCCC
Q 009109          274 LELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD---------FAPKLIDSLRNELKEFFGKNPME  344 (543)
Q Consensus       274 lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~---------i~~~f~~~l~~~~~~l~~g~~~~  344 (543)
                      +|+|||||+||++|||++.+++.+++++| .|+||.|++++|||||++         +||+|+++|+++++++ +|||.+
T Consensus       304 ~ElGGkn~~IV~~dADl~~aa~~i~~~~f-~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~  381 (549)
T cd07127         304 TEKAGVNTVVVDSTDDLKAMLRNLAFSLS-LYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPAR  381 (549)
T ss_pred             EecCCcCeEEECCCCCHHHHHHHHHHHHH-ccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-cCCccc
Confidence            99999999999999999999999999999 999999999999999999         8999999999999999 899876


Q ss_pred             -CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCC----CCc-eeeceEeeCCCCCCcccccccccceeeeeccCCH
Q 009109          345 -SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE----KQL-KIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKI  418 (543)
Q Consensus       345 -~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~----~g~-~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~  418 (543)
                       .+++|||+++.+++++.+.++    .+++++||....    .|+ |++|||+...+++|++++||+||||++|++|+|.
T Consensus       382 ~~~~~Gpli~~~~~~ri~~a~~----~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~  457 (549)
T cd07127         382 AAALLGAIQSPDTLARIAEARQ----LGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDST  457 (549)
T ss_pred             cccccCCcCCHHHHHHHHHHHh----CCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCH
Confidence             678999999999999876553    455888886531    354 5699999988899999999999999999999999


Q ss_pred             HHHHHHHHcCC--C-CcEEEEecCCHHHHHHHHhh-ccce-eEEECCCcccCCCCCCCcccCCCCCCCCcch-HHHHHHh
Q 009109          419 EDSFDVIKSKP--K-PLAAYFFSDDEQMKKEFVQN-ISAG-GIVFNDTIVHTTVSSLPFGGVGESGMGSYHG-KFSFDAF  492 (543)
Q Consensus       419 ~eai~~~n~~~--~-gl~a~i~t~d~~~~~~~~~~-l~~G-~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g-~~~~~~~  492 (543)
                      +||++++|++.  + ||++||||+|.+.++++.++ ..+| .++||....-..+..+||||.+.||.....| .+..-.|
T Consensus       458 ~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~f  537 (549)
T cd07127         458 DHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAF  537 (549)
T ss_pred             HHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccccchhhh
Confidence            99999999974  4 69999999999999999998 4554 9999955433344446699999999986554 4555667


Q ss_pred             hhceEEEEe
Q 009109          493 SHKKAVLYR  501 (543)
Q Consensus       493 ~~~k~v~~~  501 (543)
                      ...+...++
T Consensus       538 v~~r~~~~~  546 (549)
T cd07127         538 VANRFRVVQ  546 (549)
T ss_pred             hhcceEEEE
Confidence            766654443

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=100.00  E-value=5.6e-75  Score=607.75  Aligned_cols=386  Identities=18%  Similarity=0.234  Sum_probs=331.0

Q ss_pred             HHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCc----chhhH-------HHHHHHHH
Q 009109           66 VEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFI-------SEISMTKS  134 (543)
Q Consensus        66 ~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~----~ea~~-------~Ev~~~~~  134 (543)
                      .+|+++++++|++||+.|+++|..+|.++|++++++|++++++|++++++|+||+.    .++..       .|+..+++
T Consensus         3 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~   82 (417)
T PRK00197          3 MEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAE   82 (417)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999998887774    34432       37777888


Q ss_pred             HHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHH
Q 009109          135 SCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL  214 (543)
Q Consensus       135 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~  214 (543)
                      .+++++...+.+ + ...+......+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|.++.+
T Consensus        83 ~~~~~a~~~~~~-g-~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~  158 (417)
T PRK00197         83 GLRQVAALPDPV-G-EVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRA  158 (417)
T ss_pred             HHHHHhhcCCCc-c-ccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHH
Confidence            887777544321 1 1111000011235688999999999999986 4 7788999999999999999999999999999


Q ss_pred             HHHHH----hhh-cCCCceEeecC-ChH-HHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcC
Q 009109          215 LAKLL----EDY-VDNSAVRVVEG-AVA-ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS  286 (543)
Q Consensus       215 l~~~l----~~a-lP~gvv~vv~g-~~~-~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~  286 (543)
                      +++++    .++ +|+|+||+|+| +.+ .+..|..|+ +|+|+||||+++|+.|++.+   ++|+++|||||||+||++
T Consensus       159 l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~  235 (417)
T PRK00197        159 LVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDE  235 (417)
T ss_pred             HHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeC
Confidence            98886    466 99999999996 544 667777785 99999999999999999865   599999999999999999


Q ss_pred             CCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHh
Q 009109          287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDE  366 (543)
Q Consensus       287 daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~  366 (543)
                      |||++.|++.+++++| .|+| .|++++|+|||+++||+|+++|+++++++..+                          
T Consensus       236 dAdl~~Aa~~iv~~~~-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------------------------  287 (417)
T PRK00197        236 SADLDKALKIVLNAKT-QRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE--------------------------  287 (417)
T ss_pred             CCCHHHHHHHHHHhcc-CCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe--------------------------
Confidence            9999999999999999 9999 99999999999999999999999999887532                          


Q ss_pred             hhcCCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHH
Q 009109          367 DKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKE  446 (543)
Q Consensus       367 a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~  446 (543)
                            ++ ||... .+ |+ |||+   +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus       288 ------~~-~~~~~-~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~  354 (417)
T PRK00197        288 ------LR-GDEAA-LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAER  354 (417)
T ss_pred             ------Ee-cCHHH-HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHH
Confidence                  11 11100 12 33 9998   4689999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccceeEEECCCcccCCCCCCCcccCCCCCCC----CcchHHHHHHhhhceEEEEe
Q 009109          447 FVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG----SYHGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       447 ~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~v~~~  501 (543)
                      +++++++|+|+||+++.  ..+..||||.+.||+|    +++|.+|+++|++.|++++.
T Consensus       355 ~~~~l~~G~v~VN~~~~--~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~  411 (417)
T PRK00197        355 FLNEVDSAAVYVNASTR--FTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLG  411 (417)
T ss_pred             HHHhCCeeEEEEeCCCc--cCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEEC
Confidence            99999999999998765  3457899999999999    99999999999999999864

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=100.00  E-value=2e-74  Score=602.27  Aligned_cols=369  Identities=18%  Similarity=0.207  Sum_probs=321.9

Q ss_pred             HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHH-HHHHHHHHHhhhc
Q 009109           69 AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKS-SCKLALKELKYWT  147 (543)
Q Consensus        69 v~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~-~l~~~~~~~~~~~  147 (543)
                      ++.|+++|++||+.|+++|..+|.++|++++++|++++++|++++++|+|||+.+++..|+..+++ .+++++..  +..
T Consensus         1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~   78 (436)
T cd07122           1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV   78 (436)
T ss_pred             ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence            478999999999999999999999999999999999999999999999999999987557777776 66666541  111


Q ss_pred             CCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHh----hh-
Q 009109          148 KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----DY-  222 (543)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~----~a-  222 (543)
                      . .   . ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.    ++ 
T Consensus        79 g-~---~-~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG  153 (436)
T cd07122          79 G-V---I-EEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG  153 (436)
T ss_pred             e-e---e-ccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcC
Confidence            1 0   0 11123456889999999999999999999999999999999999999999999999999888875    56 


Q ss_pred             cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHh
Q 009109          223 VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAG  300 (543)
Q Consensus       223 lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~  300 (543)
                      +|+|+||+++| +.+.+..|++|+ +|+|+||||++++    +.++++++|+++|+|||||+||++|||++.|++.++++
T Consensus       154 ~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~----~~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~  229 (436)
T cd07122         154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMV----KAAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILS  229 (436)
T ss_pred             CCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHH----HHHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHH
Confidence            99999999998 677899999996 9999999999865    45677899999999999999999999999999999999


Q ss_pred             hcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhh-------cCCCCC-C-CCcccccCCHHHHHHHHHHHHhhhc-C
Q 009109          301 KWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF-------FGKNPM-E-SKDLSRIVNPFHFARLASLLDEDKV-S  370 (543)
Q Consensus       301 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l-------~~g~~~-~-~~~~gpli~~~~~~~~~~~i~~a~~-~  370 (543)
                      +| +|+||.|++++|||||+++||+|+++|+++...+       +++++. + ++++||+++..+.+++..++..+.. +
T Consensus       230 ~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~g  308 (436)
T cd07122         230 KT-FDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPED  308 (436)
T ss_pred             hh-ccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCC
Confidence            99 9999999999999999999999999999998776       666662 3 5678999988888887777655443 3


Q ss_pred             CEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcC----CCCcEEEEecCCHHHHHH
Q 009109          371 DKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSK----PKPLAAYFFSDDEQMKKE  446 (543)
Q Consensus       371 ~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~a~i~t~d~~~~~~  446 (543)
                      +++++|+             +.+++++|+++ +|.||||++|++|+|++|||+++|++    +|||++||||+|.+++++
T Consensus       309 a~vl~~~-------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~  374 (436)
T cd07122         309 TKVLVAE-------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEE  374 (436)
T ss_pred             CeEEEEe-------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHH
Confidence            4555443             46888999987 56799999999999999999999997    899999999999999999


Q ss_pred             HHhhccceeEEECCCcc
Q 009109          447 FVQNISAGGIVFNDTIV  463 (543)
Q Consensus       447 ~~~~l~~G~v~iN~~~~  463 (543)
                      +++++++|+|+||+++.
T Consensus       375 ~~~~l~aG~V~IN~~~~  391 (436)
T cd07122         375 FALRMPVSRILVNTPSS  391 (436)
T ss_pred             HHhhCCceEEEEeCCcc
Confidence            99999999999998765

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=100.00  E-value=1.1e-74  Score=603.61  Aligned_cols=380  Identities=19%  Similarity=0.275  Sum_probs=325.6

Q ss_pred             HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcc----hhhH-------HHHHHHHHHHHHH
Q 009109           71 SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF----ETFI-------SEISMTKSSCKLA  139 (543)
Q Consensus        71 ~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~----ea~~-------~Ev~~~~~~l~~~  139 (543)
                      ..+++|++||+.|+++|..+|.++|++++++|++++++|++++++|+||+..    ++..       .|+..+++.++++
T Consensus         2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~   81 (406)
T cd07079           2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV   81 (406)
T ss_pred             hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999999999777766643    3332       3777788877777


Q ss_pred             HHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHH
Q 009109          140 LKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL  219 (543)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l  219 (543)
                      +...+. .+ ..........+...+++++|+|||++|+|| +| .++++++++||++||+||+|||+.+|.++..+++++
T Consensus        82 a~~~~~-~g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~  157 (406)
T cd07079          82 AALPDP-VG-EVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEII  157 (406)
T ss_pred             HhcCCC-Cc-ccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHH
Confidence            654321 11 111100001123567899999999999996 55 788899999999999999999999999999999998


Q ss_pred             h----hh-cCCCceEeecC-Ch-HHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHH
Q 009109          220 E----DY-VDNSAVRVVEG-AV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQ  291 (543)
Q Consensus       220 ~----~a-lP~gvv~vv~g-~~-~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~  291 (543)
                      .    ++ +|+|++|+++| +. +.+..|+.|+ +|+|+||||+++|+.|++.+   ++|+++|||||||+||++|||++
T Consensus       158 ~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~  234 (406)
T cd07079         158 QEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLE  234 (406)
T ss_pred             HHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHH
Confidence            7    66 99999999998 55 4577778886 99999999999999999877   69999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCC
Q 009109          292 VTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD  371 (543)
Q Consensus       292 ~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~  371 (543)
                      .|++.+++++| .|+| .|++++|||||+++||+|+++|+++++++                                ++
T Consensus       235 ~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~--------------------------------ga  280 (406)
T cd07079         235 MAVRIVVNAKT-QRPS-VCNALETLLVHRDIAEEFLPKLAEALREA--------------------------------GV  280 (406)
T ss_pred             HHHHHHHHccc-CCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC--------------------------------CC
Confidence            99999999999 9999 99999999999999999999999887752                                23


Q ss_pred             EEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc
Q 009109          372 KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI  451 (543)
Q Consensus       372 ~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l  451 (543)
                      +++ ||...  ..|++||    ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++
T Consensus       281 ~~~-~g~~~--~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~  353 (406)
T cd07079         281 ELR-GDEET--LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREV  353 (406)
T ss_pred             EEe-cCHHH--HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhC
Confidence            433 33221  1377888    7899999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeEEECCCcccCCCCCCCcccCCCCCC----CCcchHHHHHHhhhceEEEE
Q 009109          452 SAGGIVFNDTIVHTTVSSLPFGGVGESGM----GSYHGKFSFDAFSHKKAVLY  500 (543)
Q Consensus       452 ~~G~v~iN~~~~~~~~~~~pfGG~~~SG~----G~~~g~~~~~~~~~~k~v~~  500 (543)
                      ++|+|+||+++..  .+.+||||.+.||+    |+++|.+++++|++.|++.+
T Consensus       354 ~~G~v~iN~~~~~--~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~  404 (406)
T cd07079         354 DSAAVYVNASTRF--TDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVR  404 (406)
T ss_pred             CeeEEEEeCCCcc--cCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence            9999999987652  45689999999998    99999999999999999875

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=100.00  E-value=3.5e-73  Score=602.41  Aligned_cols=410  Identities=18%  Similarity=0.199  Sum_probs=351.9

Q ss_pred             CCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHH
Q 009109           64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL  143 (543)
Q Consensus        64 a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~  143 (543)
                      .+.+|+++++++|++||+.|++++.++|.++|++++++|++++++|++++++|+||+..+++..+...+...+.+++...
T Consensus         5 ~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~~   84 (488)
T TIGR02518         5 YSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKDM   84 (488)
T ss_pred             cCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhhC
Confidence            68899999999999999999999999999999999999999999999999999999998876433444555555554422


Q ss_pred             hhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHH----H
Q 009109          144 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL----L  219 (543)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~----l  219 (543)
                      +. .+ .    .....+...+.+++|+|||++|+|||||+.++.+++++||++||+||+|||+.+|.++..++++    +
T Consensus        85 ~~-~G-~----~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l  158 (488)
T TIGR02518        85 KT-IG-I----LSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAA  158 (488)
T ss_pred             cc-cc-e----ecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHH
Confidence            21 11 1    1111234567899999999999999999999999999999999999999999999999985555    4


Q ss_pred             hhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHH
Q 009109          220 EDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRR  296 (543)
Q Consensus       220 ~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~  296 (543)
                      .++ +|+|+||+++| +.+.+..|++|+ ||+|+||||+.++    +.++.+++|+++|+|||||+||++|||++.|++.
T Consensus       159 ~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~----~~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~  234 (488)
T TIGR02518       159 EEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMV----KAAYSSGTPAIGVGPGNGPAYIERTANVKKAVRD  234 (488)
T ss_pred             HHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHH----HHHHHcCCCEEEEcCCCCeEEEeCCCCHHHHHHH
Confidence            677 99999999998 778899999996 9999999999865    4455678999999999999999999999999999


Q ss_pred             HHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHH-------HHhhcCCCC-C-CCCcccccCCHHHHHHHHHHHHhh
Q 009109          297 IIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE-------LKEFFGKNP-M-ESKDLSRIVNPFHFARLASLLDED  367 (543)
Q Consensus       297 iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~-------~~~l~~g~~-~-~~~~~gpli~~~~~~~~~~~i~~a  367 (543)
                      +++++| +|+||.|++.+|||||+++||+|+++|+++       .+.+++|+| . +.+++||+++..+++++.++++++
T Consensus       235 iv~sk~-~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~a  313 (488)
T TIGR02518       235 IIDSKT-FDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLT  313 (488)
T ss_pred             HHHHHh-cCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccc
Confidence            999999 999999999999999999999999999998       888999996 4 467899999999999999999998


Q ss_pred             hc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHc----CCCCcEEEEecCCHH
Q 009109          368 KV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKS----KPKPLAAYFFSDDEQ  442 (543)
Q Consensus       368 ~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~a~i~t~d~~  442 (543)
                      .. ++++++||..             .+++++++ ++|+||||++|++|+|++|||+++|+    ++|||+++|||+|.+
T Consensus       314 v~~gakll~gg~~-------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~  379 (488)
T TIGR02518       314 VPEDAKVLIGEQN-------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKD  379 (488)
T ss_pred             cCCCCEEEEeCCC-------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHH
Confidence            65 6799999843             35667776 79999999999999999999999887    699999999999999


Q ss_pred             HHHHHHhhccceeEEECCCccc----C---CCC--CCCcccCCCCCCCCcchHHHHHHhhhceEEEEe
Q 009109          443 MKKEFVQNISAGGIVFNDTIVH----T---TVS--SLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       443 ~~~~~~~~l~~G~v~iN~~~~~----~---~~~--~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~  501 (543)
                      .+++|++++++|+|+||++..+    .   ..+  .+.||+++.+++.   .+.|++++++.|+|...
T Consensus       380 ~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~  444 (488)
T TIGR02518       380 IVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYG  444 (488)
T ss_pred             HHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEec
Confidence            9999999999999999965321    1   112  2336666666555   38899999999998764

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=100.00  E-value=2.9e-73  Score=625.44  Aligned_cols=383  Identities=20%  Similarity=0.262  Sum_probs=335.0

Q ss_pred             HHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHcC--CCcchhh---HHHHHHHHHH
Q 009109           67 EKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAI------HKDLS--KPPFETF---ISEISMTKSS  135 (543)
Q Consensus        67 ~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~------~~etG--k~~~ea~---~~Ev~~~~~~  135 (543)
                      .++++++++|++||+.|+++|+.+|.++|++++++|+++.++|++++      ++|+|  ||+.++.   ..|+..+++.
T Consensus       294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~  373 (718)
T PLN02418        294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS  373 (718)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence            35999999999999999999999999999999999999999999996      77999  8877763   3599999999


Q ss_pred             HHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHH
Q 009109          136 CKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLL  215 (543)
Q Consensus       136 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l  215 (543)
                      ++++++. .+..+. ..+......+...++.++|+|||++|+||| |+.+. ++++|||++||+||+|||+.+|.++..+
T Consensus       374 ~~~~a~~-~~~~g~-~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l  449 (718)
T PLN02418        374 IRQLADM-EDPIGR-VLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAIL  449 (718)
T ss_pred             HHHHhcC-ccccCc-cccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHH
Confidence            9999886 333221 111000112334678999999999999999 99998 9999999999999999999999999999


Q ss_pred             HHHHhhhcCCCc----eEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCH
Q 009109          216 AKLLEDYVDNSA----VRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINL  290 (543)
Q Consensus       216 ~~~l~~alP~gv----v~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl  290 (543)
                      ++++.+++|+|+    +|+|+|+.+.+..|+.|+ ||+|+||||+.   .+++.++.++||+++|+|||||+||++|||+
T Consensus       450 ~~l~~eAlP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~---~i~~~aa~~~k~v~lELGGk~p~iV~~DADl  526 (718)
T PLN02418        450 HKVITDAIPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNK---LVSQIKASTKIPVLGHADGICHVYVDKSADM  526 (718)
T ss_pred             HHHHHHHccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHH---HHHHHHHhcCCCEEEeCCCcceEEEeCCCCH
Confidence            999999999996    999998667889999996 99999999996   4555666789999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhc-
Q 009109          291 QVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV-  369 (543)
Q Consensus       291 ~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-  369 (543)
                      +.|++.+++++| .| ||.|++.+|+|||+++||+                       |         .+.++|+++.+ 
T Consensus       527 d~A~~~i~~~~~-~n-GQ~C~a~~RllVh~~i~d~-----------------------G---------~~~~~i~~a~~~  572 (718)
T PLN02418        527 DMAKRIVVDAKT-DY-PAACNAMETLLVHKDLVQN-----------------------G---------GLNDLLVALRSA  572 (718)
T ss_pred             HHHHHHHHHHhC-CC-CCccccCcEEEEecccccc-----------------------c---------cHHHHHHHHHHC
Confidence            999999999999 88 9999999999999999986                       1         24778888765 


Q ss_pred             CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHh
Q 009109          370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQ  449 (543)
Q Consensus       370 ~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~  449 (543)
                      |+++ +||.... |      ++. + ++|++++||+|||+++|.+|+|+||||+++|+++|||+++|||+|.+++.++++
T Consensus       573 Ga~l-~Gg~~~~-g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~  642 (718)
T PLN02418        573 GVTL-YGGPRAS-K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLR  642 (718)
T ss_pred             CCEE-ECCcccc-C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHH
Confidence            5677 7885432 4      233 3 789999999999999999999999999999999999999999999999999999


Q ss_pred             hccceeEEECCCcccCCCCCCCcccCCCCCC--CCcc--hHHHHHHhhhceEEEEec
Q 009109          450 NISAGGIVFNDTIVHTTVSSLPFGGVGESGM--GSYH--GKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       450 ~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~--G~~~--g~~~~~~~~~~k~v~~~~  502 (543)
                      ++++|.|+||+++.  ..+..||||+|+||+  ||++  |++|+++|++.|+|++..
T Consensus       643 ~l~aG~V~IN~~~~--~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~  697 (718)
T PLN02418        643 QVDSAAVFHNASTR--FSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGN  697 (718)
T ss_pred             hCCeeEEEEeCCCC--CCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECC
Confidence            99999999998764  245789999999999  9886  999999999999998764

>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]

Probab=100.00  E-value=9.1e-75  Score=567.66  Aligned_cols=449  Identities=20%  Similarity=0.301  Sum_probs=400.8

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS--RKTKSYEWRMSQIQ   96 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~--w~~~~~~~R~~iL~   96 (543)
                      -+++||+| +|+++++++++.+|||        .+|+++-.+ +.++..|+|+|+++|+.||..  |++++..+|.+.|.
T Consensus       421 ph~~fi~g-~fv~~~~~~t~~tinp--------~~~~~ic~~-~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y  490 (881)
T KOG2452|consen  421 PHQLFIGG-EFVDAEGAKTSETINP--------TDGSVICQV-SLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMY  490 (881)
T ss_pred             cHhhccCc-EeecccCCccccccCC--------CCCCeeEEe-ehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhh
Confidence            46899999 9999999999999955        555555333 669999999999999999975  99999999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcC-CCCcceEEeecceEEEE
Q 009109           97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTT-YPSSAEIISEPLGVVLV  175 (543)
Q Consensus        97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~  175 (543)
                      ++|++++++.+||+.+.++|.|.-..-+...-+...++.+||++.++++..+ ...+..... ......+.++|+|||++
T Consensus       491 ~la~lme~h~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg-~tipi~~arpn~nl~lt~~epigv~g~  569 (881)
T KOG2452|consen  491 RLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG-STIPINQARPNRNLTLTRKEPVGVCGI  569 (881)
T ss_pred             hccchhhhccchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccC-ceeccccCCCCCcceeeecCcceeEEE
Confidence            9999999999999999999999877777656788999999999999988533 333322111 22456889999999999


Q ss_pred             EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109          176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      |.|||||+..+.|+.+.+|++-   ++           .++++      .|++|+++| +.-++..|..|| ++.|-|||
T Consensus       570 i~pwnyplmmlswk~aaclaa~---~~-----------k~~e~------sgvini~~gsgslvg~rls~hpdvrkigftg  629 (881)
T KOG2452|consen  570 IIPWNYPLMMLSWKTAACLAAQ---VL-----------KFAEL------TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTG  629 (881)
T ss_pred             eccCCchHHHHHHHHHHHHHHH---Hh-----------hhhhh------cceEEEecCCcchhccccccCCccceecccc
Confidence            9999999999999999999752   11           22222      489999999 556799999997 99999999


Q ss_pred             ChHHHHHHHHHHh-cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109          254 SPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN  332 (543)
Q Consensus       254 S~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~  332 (543)
                      |+++|+.|++.|+ ++.|++.+|+||++|+|++.||||++|++....+.| ++-|..|++..|+||.++|.|+|+.++.+
T Consensus       630 steig~~im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vf-f~kgenciaagr~fi~~sihd~fv~~~ve  708 (881)
T KOG2452|consen  630 STEVGKHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVF-FSKGENCIAAGRLFVEDSIHDEFVRRVVE  708 (881)
T ss_pred             chHHHHHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhcccee-ecCCcchhhhcceeehhhhhHHHHHHHHH
Confidence            9999999999988 468999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccce
Q 009109          333 ELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPL  409 (543)
Q Consensus       333 ~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv  409 (543)
                      +.+++++|||++ +++-||--.-.++.++..|++.+.+ +++++|||.. +..|.|++|||+++++..|-+..||-||||
T Consensus       709 e~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpi  788 (881)
T KOG2452|consen  709 EVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPV  788 (881)
T ss_pred             HHHhhccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCce
Confidence            999999999998 7899999889999999999998876 5699999976 668999999999999999999999999999


Q ss_pred             eeeeccC--CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHH
Q 009109          410 LPIVTVE--KIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF  487 (543)
Q Consensus       410 l~v~~~~--~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~  487 (543)
                      +.|.+|+  |+++.++.+|++++||+++|||+|...+.++++.+++|+|+||.+.-  .+...||||+|+||+|...|..
T Consensus       789 m~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~k--tdvaapfggfkqsgfgkd~ge~  866 (881)
T KOG2452|consen  789 MIISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNK--TDVAAPFGGFKQSGFGKDLGEA  866 (881)
T ss_pred             EEEEecCCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccc--cccccCCCCccccccccchhHH
Confidence            9999996  58899999999999999999999999999999999999999998753  5677899999999999999999


Q ss_pred             HHHHhhhceEEEEe
Q 009109          488 SFDAFSHKKAVLYR  501 (543)
Q Consensus       488 ~~~~~~~~k~v~~~  501 (543)
                      .+.+|...|+|++.
T Consensus       867 alneyl~~ktit~e  880 (881)
T KOG2452|consen  867 ALNEYLRVKTVTFE  880 (881)
T ss_pred             HHhhheeeEEEEee
Confidence            99999999999864

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-73  Score=642.02  Aligned_cols=414  Identities=17%  Similarity=0.197  Sum_probs=360.0

Q ss_pred             cCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHH
Q 009109           62 QRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALK  141 (543)
Q Consensus        62 ~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~  141 (543)
                      ..++.+|++++|++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||..+++..++..+.+.+.+++.
T Consensus         7 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~~~   86 (862)
T PRK13805          7 AVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNSYK   86 (862)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHhc
Confidence            55799999999999999999999999999999999999999999999999999999999998864344333333332221


Q ss_pred             HHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhh
Q 009109          142 ELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED  221 (543)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~  221 (543)
                       .+     ..............+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+
T Consensus        87 -~~-----~~~g~~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~  160 (862)
T PRK13805         87 -DE-----KTVGVIEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLD  160 (862)
T ss_pred             -CC-----CcccccCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHH
Confidence             01     111111111234567899999999999999999999999999999999999999999999999999998864


Q ss_pred             ----h-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHH
Q 009109          222 ----Y-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTT  294 (543)
Q Consensus       222 ----a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa  294 (543)
                          + +|+|+||+++| +.+.+..|++|+ +|+|+||||+.++    +.++++++|+++|+|||||+||++|||++.|+
T Consensus       161 ~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa  236 (862)
T PRK13805        161 AAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTADIKRAV  236 (862)
T ss_pred             HHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCCHHHHH
Confidence                5 99999999998 778899999997 9999999999854    56678899999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCC--E
Q 009109          295 RRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD--K  372 (543)
Q Consensus       295 ~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~--~  372 (543)
                      +.|++++| +|+||.|++++|||||+++||+|+++|+++              .+|++++.+++++.++++++..++  .
T Consensus       237 ~~i~~~k~-~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~--------------g~~l~~~~~~~~v~~~i~~a~~~~~~~  301 (862)
T PRK13805        237 NDILLSKT-FDNGMICASEQAVIVDDEIYDEVKEEFASH--------------GAYFLNKKELKKLEKFIFGKENGALNA  301 (862)
T ss_pred             HHHHHhhh-ccCCCccCCCceEEEehhhHHHHHHHHHHh--------------CCeeCCHHHHHHHHHHHhhccCCCcCc
Confidence            99999999 999999999999999999999999999887              258999999999999999875443  2


Q ss_pred             EEECcccC----CCCceeeceE------eeCCCCCCcccccccccceeeeeccCCHHHHHHHHHc----CCCCcEEEEec
Q 009109          373 IVYGGQRD----EKQLKIAPTI------LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKS----KPKPLAAYFFS  438 (543)
Q Consensus       373 v~~gg~~~----~~g~~~~Ptv------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~a~i~t  438 (543)
                      .++||...    ..|+|++||+      +.+++++|++++ |+||||++|++|+|+||||+++|+    +++||+++|||
T Consensus       302 ~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t  380 (862)
T PRK13805        302 DIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYT  380 (862)
T ss_pred             cccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC
Confidence            24566431    2488999997      678999999887 799999999999999999999988    58999999999


Q ss_pred             CCHHHHHHHHhhccceeEEECCCccc--------CCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEec
Q 009109          439 DDEQMKKEFVQNISAGGIVFNDTIVH--------TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       439 ~d~~~~~~~~~~l~~G~v~iN~~~~~--------~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~  502 (543)
                      +|.+.+++|++++++|+|+||+++..        ...+.+|||| |.||+|+++|+.|+++|++.|+|..+.
T Consensus       381 ~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~  451 (862)
T PRK13805        381 NDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRR  451 (862)
T ss_pred             CCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeecc
Confidence            99999999999999999999987522        3678899998 999999999999999999999998765

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=1.8e-71  Score=555.44  Aligned_cols=436  Identities=20%  Similarity=0.329  Sum_probs=392.8

Q ss_pred             CcccccccccCccccccCCch-hhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 009109           34 THISFPYLSLTSFSCRCSATM-AAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEA  112 (543)
Q Consensus        34 ~~~~~~~~~p~~~~~~~p~tg-~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~  112 (543)
                      .|...|++||        ++- +.+|++ .+++.+|+++|++.|.+|++.|..+++.+|+.+|+|++++++.+..+|..+
T Consensus       125 ~g~~~pV~nP--------ad~~dvVG~V-~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L  195 (769)
T COG4230         125 GGEPRPVINP--------ADPDDIVGTV-TEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGL  195 (769)
T ss_pred             CCCcccccCC--------CCHhHCeeee-eecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4666777754        443 333444 789999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHH
Q 009109          113 IHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG  192 (543)
Q Consensus       113 ~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~  192 (543)
                      +++|.||++..+. .||..++++|+||+...+.-++.               ..++|+|.|++|+|||||+.++..+++.
T Consensus       196 ~~REAGKtl~naI-AEVREAVDFlrYYA~~ar~~~g~---------------~~~~~~G~vVcISPWNFPLAIFtGqiaA  259 (769)
T COG4230         196 LVREAGKTLSNAI-AEVREAVDFLRYYAGQARDTFGN---------------LTHRPLGPVVCISPWNFPLAIFTGQIAA  259 (769)
T ss_pred             HHHHhccchhhHH-HHHHHHHHHHHHHHHHHhcccCc---------------cccCCCCcEEEECCCCchHHHHHhHHHH
Confidence            9999999999997 49999999999999987752211               3468999999999999999999999999


Q ss_pred             HhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcc-
Q 009109          193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKH-  268 (543)
Q Consensus       193 ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~-  268 (543)
                      ||++||+|+-||.++||+.+..-.++++++ +|++++|+++| +..++..|++++ ++.|.||||+++++.|.++.+++ 
T Consensus       260 AL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~  339 (769)
T COG4230         260 ALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQ  339 (769)
T ss_pred             HHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcC
Confidence            999999999999999999999999999999 99999999999 556999999985 99999999999999999988863 


Q ss_pred             --cCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-C
Q 009109          269 --LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-S  345 (543)
Q Consensus       269 --~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~  345 (543)
                        ..|++.|.||.|.+||+.+|--+.++..++.|+| ..+||.|++.+.+++++++.|..++.|+-.+.++++|+|.. .
T Consensus       340 g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAF-dSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~  418 (769)
T COG4230         340 GRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAF-DSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLT  418 (769)
T ss_pred             CCCCceEeccCCcceEEeechhhHHHHHHHHHHHHh-hcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCcccee
Confidence              5789999999999999999999999999999999 99999999999999999999999999999999999999986 8


Q ss_pred             CcccccCCHHHHHHHHHHHHhhhcCCEEEECcccC---CCCceeeceEeeCCCCCCcccccccccceeeeeccC--CHHH
Q 009109          346 KDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD---EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVE--KIED  420 (543)
Q Consensus       346 ~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~e  420 (543)
                      +|+||+|+.++.+.++++|+..+..++.++--..+   ..|.|++||++.-..  -.-++.|+|||||.|++|+  ++++
T Consensus       419 tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~--~~eL~rEVFGPVLHVvRy~~~~l~~  496 (769)
T COG4230         419 TDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELEN--LDELQREVFGPVLHVVRYKRDELDE  496 (769)
T ss_pred             ccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcCC--HHHHHHHhccceeEEEEecHHHHHH
Confidence            89999999999999999999877666655433222   369999999986433  2346889999999999995  6899


Q ss_pred             HHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCC-cchHHHHHHhhhceE
Q 009109          421 SFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGS-YHGKFSFDAFSHKKA  497 (543)
Q Consensus       421 ai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~~~~~k~  497 (543)
                      .|+-+|.++||||.+|||+-.+.+.++..++++|++|||..+++....-.||||.+.||+|- -+|+.-+..|...+.
T Consensus       497 vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p  574 (769)
T COG4230         497 VIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERP  574 (769)
T ss_pred             HHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999888888889999999999994 578889999887765

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=100.00  E-value=1e-69  Score=566.97  Aligned_cols=373  Identities=19%  Similarity=0.176  Sum_probs=329.1

Q ss_pred             HHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhh----------HHHHHHHHHHHHHHHHHH
Q 009109           74 KELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF----------ISEISMTKSSCKLALKEL  143 (543)
Q Consensus        74 ~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~----------~~Ev~~~~~~l~~~~~~~  143 (543)
                      ++|++||+.|+++|..+|.++|++++++|++++++|++++++|+||++.+..          ..|+..+++.+++++...
T Consensus         1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~   80 (397)
T cd07077           1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV   80 (397)
T ss_pred             ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence            3689999999999999999999999999999999999999999999865432          137888888888877653


Q ss_pred             hhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-
Q 009109          144 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-  222 (543)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-  222 (543)
                      .+..... .   .  .....+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|.++.++++++.++ 
T Consensus        81 ~~~~~~~-~---~--~~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~  153 (397)
T cd07077          81 GHIQDVL-L---P--DNGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAAD  153 (397)
T ss_pred             CcccceE-e---c--CCCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHh
Confidence            3322111 0   1  12357899999999999999999999 9999999999999999999999999999999998873 


Q ss_pred             ---cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHH
Q 009109          223 ---VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRI  297 (543)
Q Consensus       223 ---lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~i  297 (543)
                         +|+++|++++| +.+.+..|+.|+ +|.|+||||+++++.+.+.+.  ++|+++|+||++|+||++|||++.|++.+
T Consensus       154 ~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~  231 (397)
T cd07077         154 AAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSV  231 (397)
T ss_pred             hcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHH
Confidence               89999999997 667899999997 999999999999999988774  69999999999999999999999999999


Q ss_pred             HHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECc
Q 009109          298 IAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGG  377 (543)
Q Consensus       298 v~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg  377 (543)
                      ++++| +| ||.|+++++||||+++||+|+++|+++++.                                ++++++.||
T Consensus       232 ~~~~~-~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~--------------------------------~G~~~~~g~  277 (397)
T cd07077         232 HDSKF-FD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV--------------------------------EGLKVPQET  277 (397)
T ss_pred             HHhhc-cC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh--------------------------------cCcCcCCCc
Confidence            99999 99 999999999999999999999999988764                                234555554


Q ss_pred             ccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHH----HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccc
Q 009109          378 QRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIE----DSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA  453 (543)
Q Consensus       378 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~  453 (543)
                          .++|+.||      ++|++++||+||||++|++|+|++    +|++++|+++|||+++|||+|.+.++++++++++
T Consensus       278 ----~~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~  347 (397)
T cd07077         278 ----KPLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDT  347 (397)
T ss_pred             ----eeeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCE
Confidence                24677776      788999999999999999999996    6667889999999999999999999999999999


Q ss_pred             eeEEECCCcccCCCCCCCcccCC--CCCCCCcch-HHHHHHhhhceEEE
Q 009109          454 GGIVFNDTIVHTTVSSLPFGGVG--ESGMGSYHG-KFSFDAFSHKKAVL  499 (543)
Q Consensus       454 G~v~iN~~~~~~~~~~~pfGG~~--~SG~G~~~g-~~~~~~~~~~k~v~  499 (543)
                      |+|+||+++.+.....+||||.+  .||+|+++| .+++++|++.|+|.
T Consensus       348 G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~  396 (397)
T cd07077         348 ASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV  396 (397)
T ss_pred             EEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence            99999998876555778999999  899999999 99999999999875

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=100.00  E-value=6.4e-68  Score=549.97  Aligned_cols=363  Identities=33%  Similarity=0.528  Sum_probs=338.9

Q ss_pred             HHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCccc
Q 009109           74 KELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAK  153 (543)
Q Consensus        74 ~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~  153 (543)
                      ++|++|+++|+.++..+|.++|+++++.|.++.++|++++++|+|||+.++.. |+..+++.++++++.++++.+..   
T Consensus         1 ~~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~-ev~~~~~~l~~~~~~~~~~~~~~---   76 (367)
T cd06534           1 AAARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALG-EVARAIDTFRYAAGLADKLGGPE---   76 (367)
T ss_pred             ChHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCc---
Confidence            36899999999999999999999999999999999999999999999999874 99999999999999888765422   


Q ss_pred             ccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeec
Q 009109          154 TSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVE  232 (543)
Q Consensus       154 ~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~  232 (543)
                      ......+...+++++|+|||++|.|||+|+...++++++||++||+||+|||+.+|.++..+.+++.++ +|++++++++
T Consensus        77 ~~~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~  156 (367)
T cd06534          77 LPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVP  156 (367)
T ss_pred             ccccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEE
Confidence            111223556789999999999999999999999999999999999999999999999999999999999 8999999999


Q ss_pred             CC-hHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCcc
Q 009109          233 GA-VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQAC  310 (543)
Q Consensus       233 g~-~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C  310 (543)
                      |+ .+.+..|+.|+ +|.|.||||+++++.|.+.++++++|+++|+||+|++||++|+|++.|++.+++++| +++||.|
T Consensus       157 ~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~-~~~gq~C  235 (367)
T cd06534         157 GGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAF-FNAGQIC  235 (367)
T ss_pred             cCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCC
Confidence            94 45888999996 999999999999999999999999999999999999999999999999999999999 9999999


Q ss_pred             ccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCCceeeceE
Q 009109          311 IGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTI  390 (543)
Q Consensus       311 ~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~~Ptv  390 (543)
                      +++++||||++++|+|+++|+                                                         ||
T Consensus       236 ~s~~~v~v~~~~~~~f~~~l~---------------------------------------------------------tl  258 (367)
T cd06534         236 TAASRLLVHESIYDEFVEKLV---------------------------------------------------------TV  258 (367)
T ss_pred             CCCcEEEEcHHHHHHHHHhhc---------------------------------------------------------ee
Confidence            999999999999999998886                                                         66


Q ss_pred             eeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCC
Q 009109          391 LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSL  470 (543)
Q Consensus       391 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~  470 (543)
                      +.+++++++++++|+|||+++|++|++++||++++|++++||++||||+|...++++++++++|+|+||+.+.+. .+..
T Consensus       259 ~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~~  337 (367)
T cd06534         259 LVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGV-GPEA  337 (367)
T ss_pred             eeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCC
Confidence            777888999999999999999999999999999999999999999999999999999999999999999988744 7889


Q ss_pred             CcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          471 PFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       471 pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      ||||.+.||+|+++|++++++|++.|++.
T Consensus       338 pfgg~~~sG~g~~~g~~~~~~~~~~k~i~  366 (367)
T cd06534         338 PFGGVKNSGIGREGGPYGLEEYTRTKTVV  366 (367)
T ss_pred             CCCCcccCccCCCChHHHHHHhceEEEEe
Confidence            99999999999999999999999999874

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=1.8e-69  Score=510.66  Aligned_cols=481  Identities=18%  Similarity=0.268  Sum_probs=433.3

Q ss_pred             CCCcccchhhhhhcccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHh
Q 009109            1 MRNPSVRAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNY   80 (543)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~   80 (543)
                      +++++|.++..  +|+...|.-..+| +|..+  |....+        .+|++.++++.+ .+++.+|.+.++..|++|+
T Consensus         3 in~~~y~flke--lglte~n~gvy~g-kw~a~--g~vv~t--------~~pann~pia~v-~~asv~dye~~~k~a~ea~   68 (507)
T KOG2453|consen    3 INDSKYGFLKE--LGLTENNAGVYHG-KWAAS--GQVVQT--------FAPANNSPIANV-QNASVQDYEIAIKEAKEAY   68 (507)
T ss_pred             cccchhHHHHH--hCCcccccceeee-eeccC--CceeEe--------ecCCCCChhHHH-hhccHHHHHHHHHHHHHHH
Confidence            57899999987  9999999999999 99764  444444        499999999766 8899999999999999999


Q ss_pred             hhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCC
Q 009109           81 NSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYP  160 (543)
Q Consensus        81 ~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  160 (543)
                      +.|...|...|.++.+++.|.|+...+-|-+++++|+||-+.|.. +|+...++.++|+....+.+ .....+  ....+
T Consensus        69 kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilaegv-gevqeyvdicdyavglsr~l-~g~i~p--serpg  144 (507)
T KOG2453|consen   69 KIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAEGV-GEVQEYVDICDYAVGLSRSL-EGKIFP--SERPG  144 (507)
T ss_pred             HHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhcc-hhHHHHHHHHHHhhhhhhhh-CCcccC--CCCCc
Confidence            999999999999999999999999999999999999999999996 69999999999988765553 332221  12233


Q ss_pred             CcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhh----h-cCCCceEeecCCh
Q 009109          161 SSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED----Y-VDNSAVRVVEGAV  235 (543)
Q Consensus       161 ~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~----a-lP~gvv~vv~g~~  235 (543)
                      .-....+.|+|+|++|+.+|||-...-|.-+.||.+||+|++||++.+|+++....+++.+    - +|.+.....+|..
T Consensus       145 halleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~a  224 (507)
T KOG2453|consen  145 HALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGA  224 (507)
T ss_pred             hhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccch
Confidence            4456689999999999999999999999999999999999999999999987666655544    4 7999999999999


Q ss_pred             HHHHHHHhC-CCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCC
Q 009109          236 AETSALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVD  314 (543)
Q Consensus       236 ~~~~~L~~~-~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~  314 (543)
                      +.+.++.++ +++.+.||||+..++.+.+....+.-+..+||||||+.||.+|||+..++...++++. ..+||.|+..+
T Consensus       225 DigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk~llelggnnaiiv~edadl~lvvps~lfaav-gtagqrctt~r  303 (507)
T KOG2453|consen  225 DIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAV-GTAGQRCTTTR  303 (507)
T ss_pred             hhhhhccccCceeecccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEeccccceeeehHHHHHHh-cccccchhhhh
Confidence            999999988 5999999999999999999888888899999999999999999999999999999999 99999999999


Q ss_pred             EEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEe
Q 009109          315 YIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTIL  391 (543)
Q Consensus       315 ~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl  391 (543)
                      |++||+++||+++++|++..+++.+|+|.+ .+-+|||.++++....+.-++++++ ++++++||+. +.+|+|++|||+
T Consensus       304 rl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptiv  383 (507)
T KOG2453|consen  304 RLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIV  383 (507)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEE
Confidence            999999999999999999999999999998 5679999999999999999999876 6899999987 568999999999


Q ss_pred             eCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHh--hccceeEEECCCcccCCCCC
Q 009109          392 LDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQ--NISAGGIVFNDTIVHTTVSS  469 (543)
Q Consensus       392 ~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~--~l~~G~v~iN~~~~~~~~~~  469 (543)
                      + ..+|.++..+|.|.|||.|.+|++++||+.+-|..+.||++||||+|..++-+..-  .-++|.|.||-++.+ ...+
T Consensus       384 t-l~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsg-aeig  461 (507)
T KOG2453|consen  384 T-LKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSG-AEIG  461 (507)
T ss_pred             E-ecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCc-hhhc
Confidence            8 88999999999999999999999999999999999999999999999999888775  457899999988764 5567


Q ss_pred             CCcccCCCCCCCCcchHHHHHHhhhceEEEEec
Q 009109          470 LPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       470 ~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~  502 (543)
                      ..|||.|..|.||+.|.++.++|++..+.++..
T Consensus       462 gafggek~tgggresgsdswkqymrrstctiny  494 (507)
T KOG2453|consen  462 GAFGGEKETGGGRESGSDSWKQYMRRSTCTINY  494 (507)
T ss_pred             ccccCccccCCCcccCchHHHHHHhhceeeeec
Confidence            789999999999999999999999999988864

>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.4e-68  Score=521.24  Aligned_cols=487  Identities=18%  Similarity=0.277  Sum_probs=421.1

Q ss_pred             chhhhhhcccccccceeeecceecccCCcccccccccCccccccCCc-hhhhhhcccCCCHHHHHHHHHHHHHHhhhhcC
Q 009109            7 RAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKT   85 (543)
Q Consensus         7 ~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~   85 (543)
                      +|+++..-. -.+-.+.||| +=+...+  ....        .+|.+ ...++++ ..++.++|++||++|.+|++.|..
T Consensus        48 ~A~~~~~~~-~~evP~vIg~-~~v~t~~--~q~q--------~~P~~hq~~lA~~-~yA~~k~ie~AIkaAl~a~~~W~~  114 (561)
T KOG2455|consen   48 KALKELQKR-PLEVPLVIGD-KEVYTND--EQYQ--------VCPHNHQHVLAKV-YYATKKQIEKAIKAALSAQKTWEL  114 (561)
T ss_pred             HHHHHHhcC-ceeccEEECC-eeeecCC--cccc--------cCCchhhhhhhhe-eeccHHHHHHHHHHHHhhcCcccc
Confidence            344443333 4567889999 5443322  1222        25554 4555444 779999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcce
Q 009109           86 KSYEWRMSQIQSIANMIE-EKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAE  164 (543)
Q Consensus        86 ~~~~~R~~iL~~~a~~l~-~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (543)
                      +|..+|.+|++|+|+++. +++-+|......-.||+..++..+-+...++++|+.+..+.++...+....   ..+..+.
T Consensus       115 ~PiadR~aI~lkAAdlistkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~---~~~t~ns  191 (561)
T KOG2455|consen  115 VPIADRLAIFLKAADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQ---TKGTWNS  191 (561)
T ss_pred             CcHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccc---cCCCCcc
Confidence            999999999999999999 778888888899999999999775578889999999998888766553321   3456778


Q ss_pred             EEeecc-eEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHH
Q 009109          165 IISEPL-GVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSAL  241 (543)
Q Consensus       165 ~~~~P~-GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L  241 (543)
                      ..++|+ |.|++|+||||.....-...+||| +||+|++|||..+.+++.++.++++|| ||+|++|+|++ ++..++.+
T Consensus       192 ~~yRpleGFVaAisPFnftAI~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dti  270 (561)
T KOG2455|consen  192 MEYRPLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTI  270 (561)
T ss_pred             eeeccccceeEEecccceeeeccccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeeccee
Confidence            889999 999999999999877777778888 899999999999999999999999999 99999999999 56778988


Q ss_pred             HhCC-CCEEEEeCChHHHHHHHHHHhcc------cCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCC
Q 009109          242 LEQK-WDKILYTGSPRVGRIVMAAAAKH------LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVD  314 (543)
Q Consensus       242 ~~~~-v~~v~ftGS~~~g~~i~~~a~~~------~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~  314 (543)
                      .+++ +..+.||||+.+-+.+.+..+++      .-+++.|+||+|.-+|+++||++.++...++++| ..+||.|++.+
T Consensus       271 ta~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAf-ey~GQkcsA~S  349 (561)
T KOG2455|consen  271 TASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAF-EYQGQKCSACS  349 (561)
T ss_pred             ccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHH-hhcccccchhh
Confidence            8886 99999999999999999888765      4678999999999999999999999999999999 99999999999


Q ss_pred             EEEEeCCcHHHHHHHHHHHHHhhcCCCC-CC-CCcccccCCHHHHHHHHHHHHhhhcC--CEEEECcccCC-CCceeece
Q 009109          315 YIITTKDFAPKLIDSLRNELKEFFGKNP-ME-SKDLSRIVNPFHFARLASLLDEDKVS--DKIVYGGQRDE-KQLKIAPT  389 (543)
Q Consensus       315 ~v~V~~~i~~~f~~~l~~~~~~l~~g~~-~~-~~~~gpli~~~~~~~~~~~i~~a~~~--~~v~~gg~~~~-~g~~~~Pt  389 (543)
                      |+||++++++++.+.|.+.-+++++||| .+ ++.+||+|+...++|+.++|+.++..  ..+++||..++ .|+|+.||
T Consensus       350 RmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PT  429 (561)
T KOG2455|consen  350 RMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPT  429 (561)
T ss_pred             hcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecce
Confidence            9999999999999999999999999998 45 78999999999999999999999864  48999999864 79999999


Q ss_pred             EeeCCCCCCcccccccccceeeeeccCC--HHHHHHHH-HcCCCCcEEEEecCCHHHHHHHHhhcc--ceeEEECCCccc
Q 009109          390 ILLDVPDDSTIMKEEIFGPLLPIVTVEK--IEDSFDVI-KSKPKPLAAYFFSDDEQMKKEFVQNIS--AGGIVFNDTIVH  464 (543)
Q Consensus       390 vl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~i~t~d~~~~~~~~~~l~--~G~v~iN~~~~~  464 (543)
                      |+...+|.+++|.||+|||||+|+.|+|  ++|+++++ |.++||||.+||+.|.+.+++..++++  +|+.|||+.+++
T Consensus       430 iv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTG  509 (561)
T KOG2455|consen  430 IVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTG  509 (561)
T ss_pred             EEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEcccccc
Confidence            9999999999999999999999999965  79999998 558999999999999999999998665  799999999988


Q ss_pred             CCCCCCCcccCCCCCCC-CcchHHHHHHhhhceEEEEecCCCCCCCcCC
Q 009109          465 TTVSSLPFGGVGESGMG-SYHGKFSFDAFSHKKAVLYRSFNGDSTTRYP  512 (543)
Q Consensus       465 ~~~~~~pfGG~~~SG~G-~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~~  512 (543)
                      ......||||...||+. +.+|+.-+..|+.+++|-. .+....+++||
T Consensus       510 svvgqqpFGGaR~SGTNDKaGgp~~l~RwtSp~~ikE-t~~~l~d~~yp  557 (561)
T KOG2455|consen  510 SVVGQQPFGGARLSGTNDKAGGPHYLLRWTSPLSIKE-TFVPLTDVKYP  557 (561)
T ss_pred             ceeeccccCcccccCCCCCCCCceEEEeecCcchhhh-cccCCcccCcC
Confidence            88899999999999997 4577888889999887643 34455667774

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=100.00  E-value=1e-67  Score=583.02  Aligned_cols=382  Identities=19%  Similarity=0.246  Sum_probs=314.3

Q ss_pred             HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhH--------HHHHHHHHHHHHH
Q 009109           68 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI--------SEISMTKSSCKLA  139 (543)
Q Consensus        68 dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~--------~Ev~~~~~~l~~~  139 (543)
                      +++..+++|++||++|+.+|.++|.++|++++++|++++++|+    .|+||++.+++.        .|+..+...++++
T Consensus       287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~  362 (715)
T TIGR01092       287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL  362 (715)
T ss_pred             HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence            4888899999999999999999999999999999999999997    477777765542        2333344444444


Q ss_pred             HHHHhhhcCCCcc--ccc---CcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHH
Q 009109          140 LKELKYWTKPEKA--KTS---LTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL  214 (543)
Q Consensus       140 ~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~  214 (543)
                      +..++.|.+....  ...   ....+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|.++.+
T Consensus       363 ~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~  440 (715)
T TIGR01092       363 AISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAI  440 (715)
T ss_pred             HHHHHHHhcCCCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHH
Confidence            4444444331110  000   0111223567899999999999999 9998 6899999999999999999999999999


Q ss_pred             HHHHHhhhcCCC----ceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCC
Q 009109          215 LAKLLEDYVDNS----AVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTIN  289 (543)
Q Consensus       215 l~~~l~~alP~g----vv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daD  289 (543)
                      +++++.++||+|    ++++|+|..+.++.|..|+ +|+|+||||+++|+.|++.++   +|+++|+|||||+||++|||
T Consensus       441 l~~l~~~alp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~dAD  517 (715)
T TIGR01092       441 LHKVITEAIPIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKSAS  517 (715)
T ss_pred             HHHHHHHHcCCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECCCCC
Confidence            999999999987    6899986556677788885 999999999999999998874   99999999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhc
Q 009109          290 LQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV  369 (543)
Q Consensus       290 l~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~  369 (543)
                      ++.|++.++.++|  ++||.|+|++|||||+++||+                        |        .+.++++++.+
T Consensus       518 l~~A~~~i~~~~~--~~GQ~C~a~~rvlV~~~i~d~------------------------~--------~~~~~v~~~~~  563 (715)
T TIGR01092       518 VDMAKRIVRDAKC--DYPAACNAMETLLVHKDLLRN------------------------G--------LLDDLIDMLRT  563 (715)
T ss_pred             HHHHHHHHHHHhC--CCCCccccCcEEEEehhhccc------------------------h--------hHHHHHHHHHH
Confidence            9999866666665  569999999999999999985                        0        13455555543


Q ss_pred             -CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHH
Q 009109          370 -SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFV  448 (543)
Q Consensus       370 -~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~  448 (543)
                       |+++ +||...+  .|+.     ..+++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++|+
T Consensus       564 ~Ga~l-~Gg~~~~--~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~  635 (715)
T TIGR01092       564 EGVTI-HGGPRFA--AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFL  635 (715)
T ss_pred             CCCEE-ECCcchh--heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHH
Confidence             5566 5875432  2332     13578999999999999999999999999999999999999999999999999999


Q ss_pred             hhccceeEEECCCcccCCCCCCCcccCCCCCCCC----cchHHHHHHhhhceEEEEec
Q 009109          449 QNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGS----YHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       449 ~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~----~~g~~~~~~~~~~k~v~~~~  502 (543)
                      +++++|.|+||+++.  ..+.+||||.|.||+|+    ++|++++++|++.|+|.+..
T Consensus       636 ~~i~sG~V~vN~~~~--~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~  691 (715)
T TIGR01092       636 QHVDSAAVFHNASTR--FSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGK  691 (715)
T ss_pred             HhCCeeEEEEeCCCC--CCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECC
Confidence            999999999998754  35678999999999995    37999999999999997754

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=100.00  E-value=1.8e-67  Score=544.54  Aligned_cols=374  Identities=18%  Similarity=0.196  Sum_probs=311.9

Q ss_pred             HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCc------chhhHHHHHHHHHHHHHHHHHH
Q 009109           76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEA------IHKDLSKPP------FETFISEISMTKSSCKLALKEL  143 (543)
Q Consensus        76 A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~------~~~etGk~~------~ea~~~Ev~~~~~~l~~~~~~~  143 (543)
                      |++||+.|+++|+.+|.++|++++++|++++++|+++      +++|+|||.      .++. .|+..+++.++++++..
T Consensus         1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~-~ev~~~~~~~~~~a~~a   79 (398)
T TIGR00407         1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTE-GRLKGIADGVKDVIELA   79 (398)
T ss_pred             ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCH-HHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999999999      999999993      3455 48999999999998766


Q ss_pred             hhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHH----
Q 009109          144 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL----  219 (543)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l----  219 (543)
                      +.+ + +..+......+...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++..+++++    
T Consensus        80 ~~~-g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al  155 (398)
T TIGR00407        80 DPV-G-KVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDAL  155 (398)
T ss_pred             CCC-c-ccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHH
Confidence            542 2 1111100112446788999999999999997 6 678899999999999999999999999999999995    


Q ss_pred             hhh-cCCCceEeecC-Ch-HHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHH
Q 009109          220 EDY-VDNSAVRVVEG-AV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTR  295 (543)
Q Consensus       220 ~~a-lP~gvv~vv~g-~~-~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~  295 (543)
                      .++ +|+|+||+|+| +. +.++.|..|+ +|+|+||||+++|+.+++.   ..+|+++|+|||||+||++|||++.|++
T Consensus       156 ~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~~~~e~gGk~p~iV~~dADl~~Aa~  232 (398)
T TIGR00407       156 AQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIPVLGHGDGICHIYLDESADLIKAIK  232 (398)
T ss_pred             HHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCCEEEecCCcceEEEeCCCCHHHHHH
Confidence            477 99999999997 54 4678888886 9999999999999988774   3589999999999999999999999999


Q ss_pred             HHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEE
Q 009109          296 RIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVY  375 (543)
Q Consensus       296 ~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~  375 (543)
                      .+++++| .+ ||.|++++|+|||+++||+|+++|++++.++...       +++      .+.+.+++..         
T Consensus       233 ~iv~~~~-~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~~-------~~~------~~~i~~~v~~---------  288 (398)
T TIGR00407       233 VIVNAKT-QR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGVT-------IHA------DAYALKLLEL---------  288 (398)
T ss_pred             HHHhhhc-CC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCCE-------Eec------CHHHHHHHhc---------
Confidence            9999999 75 9999999999999999999999999999876421       221      1344444431         


Q ss_pred             CcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcccee
Q 009109          376 GGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGG  455 (543)
Q Consensus       376 gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~  455 (543)
                      ||          ||++ ++  +|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++|++++++|.
T Consensus       289 g~----------~tv~-~~--~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~  355 (398)
T TIGR00407       289 GP----------ATEA-IV--CKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAA  355 (398)
T ss_pred             cC----------cccc-cc--ccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeE
Confidence            11          3554 33  37899999999999999999999999999999999999999999999999999999999


Q ss_pred             EEECCCcccCCCCCCCcccCCCC----CCCCcchHHHHHHhhhce
Q 009109          456 IVFNDTIVHTTVSSLPFGGVGES----GMGSYHGKFSFDAFSHKK  496 (543)
Q Consensus       456 v~iN~~~~~~~~~~~pfGG~~~S----G~G~~~g~~~~~~~~~~k  496 (543)
                      |+||+++.  ..+..|||=-.+-    +...-.|+.+++.|+..|
T Consensus       356 v~iN~~~~--~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~  398 (398)
T TIGR00407       356 VYHNASTR--FTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK  398 (398)
T ss_pred             EEEeCCCC--cCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence            99999875  4456788722221    223345899999988765

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=100.00  E-value=2.7e-37  Score=303.28  Aligned_cols=390  Identities=19%  Similarity=0.249  Sum_probs=313.6

Q ss_pred             HHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC----CCcchhhHHHHHHHHHHHHHHHHH
Q 009109           67 EKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLS----KPPFETFISEISMTKSSCKLALKE  142 (543)
Q Consensus        67 ~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etG----k~~~ea~~~Ev~~~~~~l~~~~~~  142 (543)
                      .++.+..++||+|....+.++..+|.+.|.++|+.|+++.++|.++..+|.-    ..+.++..+.+...-..++.+++.
T Consensus         3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g   82 (417)
T COG0014           3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG   82 (417)
T ss_pred             hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence            3567778899999999999999999999999999999999999998877743    234555555566666677777666


Q ss_pred             HhhhcC---C--CcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHH
Q 009109          143 LKYWTK---P--EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAK  217 (543)
Q Consensus       143 ~~~~~~---~--~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~  217 (543)
                      ++....   +  +.........+-..+..+.|+||+++|  |......++...+.+|++||+||+|.+..+..+...+.+
T Consensus        83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~  160 (417)
T COG0014          83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVE  160 (417)
T ss_pred             HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHH
Confidence            665432   1  111111122345678899999999999  999999999999999999999999999999999999999


Q ss_pred             HHhh----h-cCCCceEeecC-ChHHHHHHHhC-C-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCC
Q 009109          218 LLED----Y-VDNSAVRVVEG-AVAETSALLEQ-K-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTIN  289 (543)
Q Consensus       218 ~l~~----a-lP~gvv~vv~g-~~~~~~~L~~~-~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daD  289 (543)
                      ++++    + +|++.||+++. +++....|++. . +|+|+..||...-+.|.+.+.   .||+-.+-|+|.++|+++||
T Consensus       161 ~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyvd~~AD  237 (417)
T COG0014         161 VIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYVDESAD  237 (417)
T ss_pred             HHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEecccCC
Confidence            8876    3 79999999998 77788888876 3 999999999999988888776   99999999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhc
Q 009109          290 LQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV  369 (543)
Q Consensus       290 l~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~  369 (543)
                      +|+|.+-+++++. . -.-.|++.+.++||+.+.++|+..|.+.+....+.-      -|   ++    ...+++.+   
T Consensus       238 ld~A~~ii~nAKt-q-rPs~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gvel------r~---d~----~~~~~~~~---  299 (417)
T COG0014         238 LDKALKIIVNAKT-Q-RPSVCNAAETLLVHRAIAKSFLPKLANALQEAGVEL------RG---DA----EALALLPD---  299 (417)
T ss_pred             HHHHHHHHHcccC-C-CCcccchHHHHHcCHHHHHHhHHHHHHHHHhcCeEE------Ec---CH----HHHHhccc---
Confidence            9999999999998 3 445899999999999999999999988877432100      00   00    11111110   


Q ss_pred             CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHh
Q 009109          370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQ  449 (543)
Q Consensus       370 ~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~  449 (543)
                                  .+          .+....-+..|...+++.|..+++++|||+++|..+.+||-+|.|+|.+.+++|.+
T Consensus       300 ------------~~----------~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~  357 (417)
T COG0014         300 ------------AV----------KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVN  357 (417)
T ss_pred             ------------cC----------CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHh
Confidence                        00          22333457889999999999999999999999999999999999999999999999


Q ss_pred             hccceeEEECCCcccCCCCCCCcccCCCCCCCCc--chHHHHHHhhhceEEEEe
Q 009109          450 NISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSY--HGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       450 ~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~--~g~~~~~~~~~~k~v~~~  501 (543)
                      .+++..||||.++.+.......||+.-...+.+-  .|+.|++++|..|++...
T Consensus       358 ~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G  411 (417)
T COG0014         358 EVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRG  411 (417)
T ss_pred             hcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeC
Confidence            9999999999999876666666666544344444  499999999999998764

>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC

Probab=100.00  E-value=1.8e-35  Score=309.94  Aligned_cols=270  Identities=18%  Similarity=0.223  Sum_probs=208.2

Q ss_pred             CCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCC----CceEee--cC
Q 009109          160 PSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDN----SAVRVV--EG  233 (543)
Q Consensus       160 ~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~----gvv~vv--~g  233 (543)
                      +...+++++|+|||++|+|||||+ +.++.+++||++||++|+|||+.+|.++..+.+++.+++|+    +.++++  +|
T Consensus       103 ~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~~p~~~~~~~~~vv~~~g  181 (422)
T cd07080         103 GRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADVDPNHPLTDSISVVYWPG  181 (422)
T ss_pred             CCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhcCCCCcccceEEEEEecC
Confidence            346688999999999999999999 79999999999999999999999999999999999999888    888888  46


Q ss_pred             -ChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCC-CcEEEcCCC----CHHHHHHHHHHhhcccCCC
Q 009109          234 -AVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGK-SPAVVDSTI----NLQVTTRRIIAGKWMANNG  307 (543)
Q Consensus       234 -~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~-~p~iV~~da----Dl~~aa~~iv~~~~~~~~G  307 (543)
                       +.+.++.|++++ |.|+||||+++++.|++.++.+  +.++|+||| +++|+++++    |++.+++.++++++ .|+|
T Consensus       182 ~~~~~~~~l~~~~-D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~-~~~g  257 (422)
T cd07080         182 GDAELEERILASA-DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDIC-RYDQ  257 (422)
T ss_pred             CchHHHHHHHHhC-CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHH-HHhh
Confidence             445888899888 9999999999999999998865  569999999 556666678    99999999999999 9999


Q ss_pred             CccccCCEEEEeCCc---HHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhh-cCCEEEECcccCCCC
Q 009109          308 QACIGVDYIITTKDF---APKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQ  383 (543)
Q Consensus       308 q~C~a~~~v~V~~~i---~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~v~~gg~~~~~g  383 (543)
                      |.|+|+++||||+++   +++|+++|+++++++....|..     ++ +.....++...=..+. .+.+....   ...+
T Consensus       258 Q~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~-----~~-~~~~~~~~~~~r~~~~~~~~~~~~~---~~~~  328 (422)
T cd07080         258 QACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL-----SL-SAAESAKIARARLEAEFYELKGGVS---RDLG  328 (422)
T ss_pred             hhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC-----CC-CHHHHHHHHHHHHHHHHHHHhcCCC---CCCC
Confidence            999999999999999   9999999999999886433321     11 2222222222111111 11111101   1111


Q ss_pred             ceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccc
Q 009109          384 LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA  453 (543)
Q Consensus       384 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~  453 (543)
                      +    ||+......  +. ....+=.+.|.++++++|++..++.  +-.|++++..+.+. .++++++..
T Consensus       329 ~----~v~~~~~~~--~~-~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~~  388 (422)
T cd07080         329 W----TVIISDEIG--LE-ASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALAA  388 (422)
T ss_pred             e----EEEEeCCCC--cc-CCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHHH
Confidence            1    444332222  11 1455567889999999999999986  77899999998887 677776654

Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.

>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.97  E-value=3e-30  Score=244.62  Aligned_cols=384  Identities=20%  Similarity=0.264  Sum_probs=290.4

Q ss_pred             HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH------cCCCcchhhHHHHHHHHHHHHHHHHH
Q 009109           69 AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKD------LSKPPFETFISEISMTKSSCKLALKE  142 (543)
Q Consensus        69 v~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e------tGk~~~ea~~~Ev~~~~~~l~~~~~~  142 (543)
                      +++..+.||.++...+.++.++|.++|.+++++|+.+..++.++...|      .|  +.+.....+...-..+...+..
T Consensus         2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~G--L~~sll~RL~l~~~K~~sl~~g   79 (433)
T KOG4165|consen    2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAG--LAESLLKRLDLSPGKISSLAAG   79 (433)
T ss_pred             HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcC--ccHHHHHHhcCChHHHHHHHHH
Confidence            355667899999999999999999999999999999888877665444      44  4444433444444444444444


Q ss_pred             HhhhcCCCc--ccc---cCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHH
Q 009109          143 LKYWTKPEK--AKT---SLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAK  217 (543)
Q Consensus       143 ~~~~~~~~~--~~~---~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~  217 (543)
                      ++.....+.  .+.   .....+-.-+....|+||.++|  |....-.+....+.|+++||.+++|....+..+...|.+
T Consensus        80 ~~~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~  157 (433)
T KOG4165|consen   80 LRQIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHK  157 (433)
T ss_pred             HHHHHhcccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHH
Confidence            443322110  010   0112233456678899999999  888888888889999999999999999999999999999


Q ss_pred             HHhhhc-----CCCceEeecCChHHHHHHHhC-C-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCH
Q 009109          218 LLEDYV-----DNSAVRVVEGAVAETSALLEQ-K-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINL  290 (543)
Q Consensus       218 ~l~~al-----P~gvv~vv~g~~~~~~~L~~~-~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl  290 (543)
                      ++++++     |.+.|++|+...+ ...|++. . ||.|+..||+...|.|.....   +||..+..|.+.++|++|||+
T Consensus       158 ~v~~al~~~~~~~~aV~LV~sREe-v~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~dad~  233 (433)
T KOG4165|consen  158 LVQEALGTHGGPGKAVQLVTSREE-VSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDKDADL  233 (433)
T ss_pred             HHHHHhhhccCchhhhhheecHHH-HHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEeccccCH
Confidence            999874     6778899975444 4455554 4 999999999999999977554   999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCccccCCEEEEeCCcH-HHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhc
Q 009109          291 QVTTRRIIAGKWMANNGQACIGVDYIITTKDFA-PKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV  369 (543)
Q Consensus       291 ~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~  369 (543)
                      ++|.+-+..++.  +..-.|++.+.+++|++.. ..|.+.|...+.                                 .
T Consensus       234 ~kA~riv~DaK~--dYPAaCNAmETLLIh~dl~~~~~~~~l~~~l~---------------------------------~  278 (433)
T KOG4165|consen  234 DKAKRIVRDAKC--DYPAACNAMETLLIHKDLEQSPFFDDLINMLK---------------------------------E  278 (433)
T ss_pred             HHHHHHHhcccC--CCchhhhhHHHHhccHhhhhcchHHHHHHHHH---------------------------------h
Confidence            999988888886  7778999999999999843 445554444333                                 2


Q ss_pred             CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHh
Q 009109          370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQ  449 (543)
Q Consensus       370 ~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~  449 (543)
                      ++.-+++|..-.       .++.--++...-++.|.-.-.+++-.+++.++||+.+|..+.+||-+|.|+|.+.+++|..
T Consensus       279 ~gVtl~agpkl~-------~~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~  351 (433)
T KOG4165|consen  279 EGVTLHAGPKLA-------ALLKFSPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLK  351 (433)
T ss_pred             cCeEEecChhHH-------hhcCcCCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHh
Confidence            333344443211       0111124555668889888899999999999999999999999999999999999999999


Q ss_pred             hccceeEEECCCcccCCCCCCCcccCCCCCCCCcc--hHHHHHHhhhceEEEEec
Q 009109          450 NISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYH--GKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       450 ~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~--g~~~~~~~~~~k~v~~~~  502 (543)
                      .+++..|+.|.++.+...-+..+|..-...++|.|  |+.|++.++..|++....
T Consensus       352 ~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG~  406 (433)
T KOG4165|consen  352 HVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRGK  406 (433)
T ss_pred             ccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEecC
Confidence            99999999999997543333334443334456765  899999999999987654

>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins

Probab=99.76  E-value=3.6e-15  Score=154.62  Aligned_cols=272  Identities=18%  Similarity=0.198  Sum_probs=189.2

Q ss_pred             ceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCC----CceEee--cC-Ch
Q 009109          163 AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDN----SAVRVV--EG-AV  235 (543)
Q Consensus       163 ~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~----gvv~vv--~g-~~  235 (543)
                      .+..+.|.|++++|.|.|-|..... .++.+|.+||..|+|+|+..+.++..|.+.|.+..|.    ..+.++  ++ +.
T Consensus        81 ~~~~~~p~g~v~Hi~agNvp~~~~~-S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l~~~i~v~~~~~~d~  159 (399)
T PF05893_consen   81 GYVRAFPRGLVFHIAAGNVPLVGFY-SLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPLADSIAVVYWPGGDE  159 (399)
T ss_pred             chhhccCCceEEEEcCCCccchHHH-HHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchhhhcEEEEEecCCch
Confidence            6778999999999999999986554 5777888999999999999999999999999887665    345666  45 44


Q ss_pred             HHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCE
Q 009109          236 AETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDY  315 (543)
Q Consensus       236 ~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~  315 (543)
                      +..+.+. ...|.|+.+||.++.+.+.+ .....++.+.-..-.+-++|..+++++.+++.+..-.+ ...+|.|.|++.
T Consensus       160 ~~~~~~~-~~~D~vv~wGgd~ti~~ir~-~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~-~~dQ~aCsSp~~  236 (399)
T PF05893_consen  160 ELEEALS-QQADAVVAWGGDETIRAIRQ-PLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIF-LFDQQACSSPQV  236 (399)
T ss_pred             HHHHHHH-HHCCEEEEeCCHHHHHHHHH-HcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHH-HhhCcccCCCeE
Confidence            5555555 44799999999999999988 44444666655666778888999999999999999999 899999999999


Q ss_pred             EEEeC---CcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHH-----hhhcCC-EEEECcccCCCCcee
Q 009109          316 IITTK---DFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD-----EDKVSD-KIVYGGQRDEKQLKI  386 (543)
Q Consensus       316 v~V~~---~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~-----~a~~~~-~v~~gg~~~~~g~~~  386 (543)
                      |||..   .-.++|.++|.+++++....-|...      .+......+....+     .+..+. ++. ++..   +   
T Consensus       237 ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~---~---  303 (399)
T PF05893_consen  237 IFVETGDGDSVEEFAERLAEALERAAERYPRGE------LSIDEAAAISSLRAEAELRYALDGEYRVW-SSDD---N---  303 (399)
T ss_pred             EEEECCCcccHHHHHHHHHHHHHHHHHhCCCcC------CCHHHHHHHHHHHHHHHHHHHhcCCccee-ecCC---C---
Confidence            99993   3457889998888877632222111      11222222222221     222333 333 2211   1   


Q ss_pred             eceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHh-hcccee
Q 009109          387 APTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQ-NISAGG  455 (543)
Q Consensus       387 ~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~-~l~~G~  455 (543)
                      .-||+.....   ......++=.+.|.++++++|++..++....=.|++++... ....++++ -...|.
T Consensus       304 ~~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv  369 (399)
T PF05893_consen  304 SWTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGV  369 (399)
T ss_pred             CEEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCC
Confidence            1255543221   22334445688999999999999999987433577887655 44455555 334453

The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process

>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]

Probab=99.39  E-value=7.7e-13  Score=111.11  Aligned_cols=144  Identities=24%  Similarity=0.304  Sum_probs=110.3

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhh--cCCEEEECcccCCCCceeeceEeeCCCCCCc
Q 009109          323 APKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDK--VSDKIVYGGQRDEKQLKIAPTILLDVPDDST  399 (543)
Q Consensus       323 ~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~--~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~  399 (543)
                      .....+.|++..+.+++-+... .+|.     .+...|+.++++.-.  .+..+..-|  -.+|.|+.||+|. |+|+|.
T Consensus         8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~--ya~~~f~~~tiLs-vtP~ms   79 (157)
T KOG2449|consen    8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPG--YAEGNFVGPTILS-VTPNMS   79 (157)
T ss_pred             hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeec--cccCCcccceEEE-ecCCcc
Confidence            3556677888888887765443 4455     455667777776421  122222222  2368899999998 999999


Q ss_pred             ccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccC
Q 009109          400 IMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGV  475 (543)
Q Consensus       400 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~  475 (543)
                      ++.||+||||+....-++++|+|.++|+++||-...|||.+.+.++.+....++|.+-+|.+.. ...+...|-|-
T Consensus        80 ~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip-~ilk~~sfsg~  154 (157)
T KOG2449|consen   80 CYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIP-VILKMFSFSGD  154 (157)
T ss_pred             eeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccccc-ccccceecccc
Confidence            9999999999999999999999999999999999999999999999999999999999997532 23344445443

>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster

Probab=99.13  E-value=1e-09  Score=101.65  Aligned_cols=164  Identities=11%  Similarity=0.155  Sum_probs=123.4

Q ss_pred             CcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHH
Q 009109          280 SPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFAR  359 (543)
Q Consensus       280 ~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~  359 (543)
                      .-+||++|.|++.|+..++.+.-   ..-...+.-.|+|||++.|+|+++++.+++.+...          +.+...+.|
T Consensus         6 ~lMIvfe~GDlnsA~~~L~~sl~---~Pf~~~~VatVlVqEsireefi~rvr~~m~pl~~~----------va~Hpny~r   72 (215)
T PF07368_consen    6 QLMIVFEDGDLNSAMHYLLESLH---NPFAPGAVATVLVQESIREEFIERVRSRMKPLSPQ----------VANHPNYLR   72 (215)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHHh---CcccCCcEEEEEEeHHHHHHHHHHHHHhCccCChh----------hccCcHHHH
Confidence            34899999999999999999954   55567788999999999999999999998765311          112223444


Q ss_pred             HHHHHHhhhcCCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcC--CCCcEEEEe
Q 009109          360 LASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSK--PKPLAAYFF  437 (543)
Q Consensus       360 ~~~~i~~a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~--~~gl~a~i~  437 (543)
                      -.+.++.  -+++++.++... .-..-.|.++.+.+.+  .+.. --.+|+++..|++..||++++++.  +++ +.|||
T Consensus        73 sl~~i~~--l~~~~I~~~~~~-~~~~aSPilV~d~~h~--~fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW  145 (215)
T PF07368_consen   73 SLKKIKC--LNAKTIVADFEN-VPPPASPILVCDFTHS--YFGD-GPTGVITLHTFRTPKEAIELCAKETLPFD-SVSIW  145 (215)
T ss_pred             HHHHHHh--cCCeEEEecccC-CCCCCCCEEEcCCCHH--HcCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEe
Confidence            4444442  356777774321 1123358888877654  2333 334799999999999999999974  444 99999


Q ss_pred             cCCHHHHHHHHhhccceeEEECCCcc
Q 009109          438 SDDEQMKKEFVQNISAGGIVFNDTIV  463 (543)
Q Consensus       438 t~d~~~~~~~~~~l~~G~v~iN~~~~  463 (543)
                      ++..+.+-+++.++++..++||+...
T Consensus       146 ~ekla~~Yel~~~l~~~~f~iNC~~V  171 (215)
T PF07368_consen  146 NEKLASAYELAARLPCDTFYINCFNV  171 (215)
T ss_pred             CcHHHHHHHHHHhCCCCEEEEEeccC
Confidence            99999999999999999999998765

The function of this family is unknown.

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=98.30  E-value=2.6e-06  Score=99.75  Aligned_cols=105  Identities=20%  Similarity=0.160  Sum_probs=80.5

Q ss_pred             CCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeecCChHH
Q 009109          158 TYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAE  237 (543)
Q Consensus       158 ~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~g~~~~  237 (543)
                      ..|..+..+..|+|++++|+|||   ...+.+++.||++||+||+||++.++.        ....+|..+.+.+    ..
T Consensus      1067 PTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~--------~~~~Lp~~~~~~~----~~ 1131 (1208)
T PRK11905       1067 PTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA--------ALADLPGLVAARI----DW 1131 (1208)
T ss_pred             CCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH--------HHHhCcccccccc----cc
Confidence            35788999999999999999999   557789999999999999999988652        1112565555444    23


Q ss_pred             HHHHHhCC-CCEEEEeCChHHHHHHHHHHhccc---CcEEEecC
Q 009109          238 TSALLEQK-WDKILYTGSPRVGRIVMAAAAKHL---TPVILELG  277 (543)
Q Consensus       238 ~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~---~~~~lelg  277 (543)
                      +..+..++ ++.|.|+||+++.+.+.++.+++.   .|++.|..
T Consensus      1132 ~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905       1132 TQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred             ccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence            34566664 999999999999999999888763   44444443

>PRK13770 histidinol dehydrogenase; Provisional

Probab=96.29  E-value=1.7  Score=45.06  Aligned_cols=258  Identities=16%  Similarity=0.202  Sum_probs=139.9

Q ss_pred             CCcceEEeecceEEEEEcCCc---hhhhhhhhHHHHHhhcCCEEEEe--CCCCChHHHHHHHHHHhhhcCCCceEee-cC
Q 009109          160 PSSAEIISEPLGVVLVISTWN---YPFLLSLDPVIGAIAAGNAVVLK--PSEIAPATSSLLAKLLEDYVDNSAVRVV-EG  233 (543)
Q Consensus       160 ~~~~~~~~~P~GVv~~i~p~N---~P~~~~~~~~~~ALaaGN~VVlK--ps~~~p~~~~~l~~~l~~alP~gvv~vv-~g  233 (543)
                      +.....++.|+--|++..|--   ||- +.+..++||-.+|+.=|+-  |+.........|+-+ +.   .|+=.+. -|
T Consensus       101 gv~~g~~~~Pi~rvGlYVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~Aa-~~---~Gv~eIy~iG  175 (416)
T PRK13770        101 SVECYEIYHPLESVGIYVPGGKASYPS-TVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLAAC-YI---TQVNQVFQVG  175 (416)
T ss_pred             CcEEEEEEeeeeeeEEEccCCCCCccH-HHHHhhccHhhcCCCeEEEEeCcCCCCCCHHHHHHH-HH---cCCCeeeccC
Confidence            445567889999999999963   443 4455688999999876554  443211112222211 11   1222222 24


Q ss_pred             ChHHHHHHH---hC--CCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCc--EEEcCCCCHHHHHHHHHHhhcccCC
Q 009109          234 AVAETSALL---EQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP--AVVDSTINLQVTTRRIIAGKWMANN  306 (543)
Q Consensus       234 ~~~~~~~L~---~~--~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p--~iV~~daDl~~aa~~iv~~~~~~~~  306 (543)
                      +.....+|.   ..  +||.|+=.|..-+...=..-...-.+-   -..|.+=  +|-+++||.+..+..++.-+= ...
T Consensus       176 GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID---~~AGPSEvlViAD~~Anp~~iAaDLLaQAE-Hd~  251 (416)
T PRK13770        176 GAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGID---QIAGPTEIALIIDETADLDAIVYDVFAQAE-HDE  251 (416)
T ss_pred             CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCCcCcC---CCCCCceeEEEecCCCCHHHHHHHHHHHhc-cCC
Confidence            555555655   22  399999888654321111011111111   1234443  333667999999999887765 222


Q ss_pred             CCccccCCEEEEeCC--cHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCCc
Q 009109          307 GQACIGVDYIITTKD--FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQL  384 (543)
Q Consensus       307 Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~  384 (543)
                           ..+.++|..+  +.++..+++...+..+.                 ..    +.++++.+               
T Consensus       252 -----~a~~iLvT~s~~la~~V~~ev~~ql~~lp-----------------r~----~i~~~al~---------------  290 (416)
T PRK13770        252 -----LARTYVISEDAQVLKDLESRIAKALPNVD-----------------RY----DIVSKSIA---------------  290 (416)
T ss_pred             -----CCcEEEEeCCHHHHHHHHHHHHHHHHhCC-----------------hH----HHHHHHHH---------------
Confidence                 1334555444  33444444444443331                 00    11221111               


Q ss_pred             eeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc-cceeEEECCCcc
Q 009109          385 KIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI-SAGGIVFNDTIV  463 (543)
Q Consensus       385 ~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l-~~G~v~iN~~~~  463 (543)
                                          -+|   .++.++|++||++++|..--= -.-|.++|+.   .+..++ .+|.|++..++.
T Consensus       291 --------------------~~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaiFlG~~sp  343 (416)
T PRK13770        291 --------------------NQH---YLIHASNFDEACHVMNTIAPE-HASIQTVNPQ---PYIEKVKYVGALFIGHYSP  343 (416)
T ss_pred             --------------------hCC---EEEEECCHHHHHHHHHhhChH-hheehhCCHH---HHHhhCCEeceeccCCCCc
Confidence                                011   235569999999999985322 2457888874   455555 479999976542


Q ss_pred             c-------CCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          464 H-------TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       464 ~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      -       ..++-+|     .+|..|+.+..+...|...-++.
T Consensus       344 ~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~~  381 (416)
T PRK13770        344 EVIGDYVAGPSHVLP-----TNRTARFTNGLSVNDFLTRNTVI  381 (416)
T ss_pred             hhhhccccCCCCcCC-----CCcceeccCCCcHHHeecceeeE
Confidence            1       1122233     34667888888889998877654

>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine

Probab=96.24  E-value=1.8  Score=44.96  Aligned_cols=285  Identities=19%  Similarity=0.246  Sum_probs=129.7

Q ss_pred             HHHHHHHHHHhhhcCCCccccc--C-cCCCCcceEEeecceEEEEEcC---CchhhhhhhhHHHHHhhcCCEEEEe--CC
Q 009109          134 SSCKLALKELKYWTKPEKAKTS--L-TTYPSSAEIISEPLGVVLVIST---WNYPFLLSLDPVIGAIAAGNAVVLK--PS  205 (543)
Q Consensus       134 ~~l~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~P~GVv~~i~p---~N~P~~~~~~~~~~ALaaGN~VVlK--ps  205 (543)
                      +.++..+++++.+...+.....  . ...|.....++.|+--|++..|   .-||- +.+..++||-.+|..=|+-  |+
T Consensus        68 ~Ai~~A~~~I~~fh~~q~~~~~~~~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pS-tvlM~aiPA~vAGV~~Iv~~TPp  146 (412)
T PF00815_consen   68 EAIEQAAENIRAFHEAQLPKKDWEVETEPGVILGQRYRPIERVGLYVPGGRAPYPS-TVLMTAIPAKVAGVKEIVVCTPP  146 (412)
T ss_dssp             HHHHHHHHHHHHHHHTT-----EEEEEETTEEEEEEEEE-SEEEEE---SSS--TH-HHHHHHHHHHHHT-SEEEEEE-S
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCcEEEecCCcEEEEEEEEhhheEEEccCCCCCccH-HHHHcccchhhcCCCeEEEEcCC
Confidence            3444555555555444432111  1 1234456778999999999999   44554 4455678999999765544  43


Q ss_pred             CCC-hHHHHHHHHHHhhhcCCCceEeec-CChHHHHHHH---hC--CCCEEEEeCChHHHHHHHHHHhcccCcEEEecCC
Q 009109          206 EIA-PATSSLLAKLLEDYVDNSAVRVVE-GAVAETSALL---EQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGG  278 (543)
Q Consensus       206 ~~~-p~~~~~l~~~l~~alP~gvv~vv~-g~~~~~~~L~---~~--~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG  278 (543)
                      ... ......|+-+ ..   .|+=.+.. |+.....+|.   +.  +||+|+=.|..-+...=..-...-.+-   -+.|
T Consensus       147 ~~~G~i~p~vL~Aa-~~---~Gv~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID---~~AG  219 (412)
T PF00815_consen  147 PKDGKINPAVLAAA-HL---AGVDEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGID---MIAG  219 (412)
T ss_dssp             S------HHHHHHH-HH---TT-SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES-------
T ss_pred             CccCCCCHHHHHHH-HH---cCCCEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccC---CCCC
Confidence            331 1111111111 11   13222222 4555555554   22  399999888764432211111111111   1234


Q ss_pred             CCc--EEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHH
Q 009109          279 KSP--AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFH  356 (543)
Q Consensus       279 ~~p--~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~  356 (543)
                      .+=  +|-+++||.+..+..++.-+= .+..     .+.++|..+  +++.+++.+++.+....-|          ..  
T Consensus       220 PSEv~ViAD~~A~p~~vAaDLLaQAE-Hd~~-----a~~vLvt~s--~~la~~V~~~v~~~l~~l~----------r~--  279 (412)
T PF00815_consen  220 PSEVLVIADETANPEFVAADLLAQAE-HDPD-----AQAVLVTTS--EELAEAVEAEVERQLEELP----------RR--  279 (412)
T ss_dssp             --EEEEEE-TTS-HHHHHHHHHHHHT-T-TT------EEEEEES---HHHHHHHHHHHHHHHTT-T----------TH--
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHhc-cCCC-----CceEEEECC--HHHHHHHHHHHHHHHHhCC----------ch--
Confidence            443  344678999999999887765 3322     234566555  5566666555554321111          11  


Q ss_pred             HHHHHHHHHhhhcCCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEE
Q 009109          357 FARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYF  436 (543)
Q Consensus       357 ~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i  436 (543)
                           +.++++.+                                    +|   .++.++|++||++++|..--= -..|
T Consensus       280 -----~i~~~sl~------------------------------------~g---~ii~~~~l~ea~~~~N~~APE-HLel  314 (412)
T PF00815_consen  280 -----EIAEKSLE------------------------------------NG---AIIVVDSLEEAIELANEYAPE-HLEL  314 (412)
T ss_dssp             -----HHHHHHHT------------------------------------T----EEEE-SSHHHHHHHHHHH--S-EEEE
T ss_pred             -----HHHHHHHH------------------------------------CC---eEEEECCHHHHHHHHHHhhHH-HHHH
Confidence                 11111111                                    11   245568999999999985322 4678


Q ss_pred             ecCCHHHHHHHHhhc-cceeEEECCCccc-------CCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          437 FSDDEQMKKEFVQNI-SAGGIVFNDTIVH-------TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       437 ~t~d~~~~~~~~~~l-~~G~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      .++|+.   .+..++ .+|.|++..++.-       ..++-+|-     +|..|+.|..+...|....++.
T Consensus       315 ~~~~~~---~~~~~i~~AGaiFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~  377 (412)
T PF00815_consen  315 QVEDPE---ELLEKIRNAGAIFLGEYTPEALGDYAAGPNHVLPT-----GGTARFSSGLSVDDFLKRISVQ  377 (412)
T ss_dssp             ESTTHH---HHGGG--S-SEEEESTT--HHHHHHTSSS-----------TTGGGT---S-GGGGEEEEEEE
T ss_pred             HHcCHH---HHHHHhhccChhhcCCCCCHHHhhhccCCCccCCC-----CccccccCCCcHHHccceeeEE
Confidence            888874   455555 4799999976421       22333444     4567888888889998877654

In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.

>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E

Probab=95.98  E-value=2.4  Score=43.87  Aligned_cols=262  Identities=17%  Similarity=0.195  Sum_probs=140.3

Q ss_pred             CCCcceEEeecceEEEEEcCCc-hhh-hhhhhHHHHHhhcCCEEEEe--CCCCC-hHHHHHHHHHHhhhcCCCceEeec-
Q 009109          159 YPSSAEIISEPLGVVLVISTWN-YPF-LLSLDPVIGAIAAGNAVVLK--PSEIA-PATSSLLAKLLEDYVDNSAVRVVE-  232 (543)
Q Consensus       159 ~~~~~~~~~~P~GVv~~i~p~N-~P~-~~~~~~~~~ALaaGN~VVlK--ps~~~-p~~~~~l~~~l~~alP~gvv~vv~-  232 (543)
                      .|.....++.|+--|++..|-- +|+ ++.+..++||-.+|+.=|+-  |.... ......|+-+ +.   .|+=.+.. 
T Consensus        82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa-~~---~Gv~eiy~v  157 (390)
T cd06572          82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAA-KL---AGVDEIYKV  157 (390)
T ss_pred             CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHH-HH---cCCcEEecc
Confidence            3556678899999999999865 333 34455678999999875544  44321 1111112111 11   13222322 


Q ss_pred             CChHHHHHHHh----CC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCc--EEEcCCCCHHHHHHHHHHhhcccC
Q 009109          233 GAVAETSALLE----QK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP--AVVDSTINLQVTTRRIIAGKWMAN  305 (543)
Q Consensus       233 g~~~~~~~L~~----~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p--~iV~~daDl~~aa~~iv~~~~~~~  305 (543)
                      |+.....+|.-    .+ +|.|+=.|..-+...=..-...-..-   -..|.+=  +|-+++||.+..+..++.-+= ..
T Consensus       158 GGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g~V~ID---~~AGPSEvlIiAD~~A~p~~vAaDLLaQAE-H~  233 (390)
T cd06572         158 GGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSGDVGID---MPAGPSEVLVIADETANPEFVAADLLSQAE-HD  233 (390)
T ss_pred             CCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcCCcCcc---CCCCCceEEEEeCCCCCHHHHHHHHHhhhc-cC
Confidence            46666666652    23 99999888543321111101110111   1233442  334667999999988887765 22


Q ss_pred             CCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCCce
Q 009109          306 NGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLK  385 (543)
Q Consensus       306 ~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~~  385 (543)
                       .    ..+.++|..+  .++.+++.+++.+....-|           +  .+    .+.++..                
T Consensus       234 -~----~a~aiLvT~s--~~la~~V~~~v~~ql~~l~-----------r--~~----~~~~~~~----------------  273 (390)
T cd06572         234 -P----DSQAILVTTS--EELAEAVEEEVERQLAELP-----------R--RE----IAAKSLL----------------  273 (390)
T ss_pred             -C----CCeEEEEECC--HHHHHHHHHHHHHHHHhCC-----------c--HH----HHHHHHH----------------
Confidence             1    2334555554  3444444444443221000           0  00    1111110                


Q ss_pred             eeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc-cceeEEECCCccc
Q 009109          386 IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI-SAGGIVFNDTIVH  464 (543)
Q Consensus       386 ~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l-~~G~v~iN~~~~~  464 (543)
                                         -+   -.++.++|++|+++++|..--= -.-|.++|+..   +..++ .+|.|++..++.-
T Consensus       274 -------------------~~---g~ii~~~~~~eai~~~N~~APE-HLel~~~~~~~---~l~~i~nAGsiFlG~~tp~  327 (390)
T cd06572         274 -------------------DY---GAIILVDDLEEAIELANEYAPE-HLELQTEDPEE---LLEKIRNAGSIFLGPYTPE  327 (390)
T ss_pred             -------------------hC---CEEEEECCHHHHHHHHHhhchh-hheeHhcCHHH---HHhhCccceEEeecCCCch
Confidence                               00   1245568999999999985322 35677888754   44444 5799999876421


Q ss_pred             -------CCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          465 -------TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       465 -------~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                             ..++-+|.     +|+.|+.|..+...|...-++.
T Consensus       328 a~GDY~aGpNHvLPT-----~G~Ar~~sgL~v~~F~K~~s~~  364 (390)
T cd06572         328 ALGDYAAGPNHVLPT-----GGTARFYSGLSVDDFLKRITVQ  364 (390)
T ss_pred             hhhccccCCCCccCC-----CcceeecCCCCHHHheecceeE
Confidence                   12223333     4667888888889998877654

C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.

>TIGR00069 hisD histidinol dehydrogenase

Probab=95.69  E-value=3.1  Score=42.97  Aligned_cols=262  Identities=18%  Similarity=0.181  Sum_probs=141.5

Q ss_pred             CCCcceEEeecceEEEEEcCCc---hhhhhhhhHHHHHhhcCCEEEEe--CCCC-ChHHHHHHHHHHhhhcCCCceEee-
Q 009109          159 YPSSAEIISEPLGVVLVISTWN---YPFLLSLDPVIGAIAAGNAVVLK--PSEI-APATSSLLAKLLEDYVDNSAVRVV-  231 (543)
Q Consensus       159 ~~~~~~~~~~P~GVv~~i~p~N---~P~~~~~~~~~~ALaaGN~VVlK--ps~~-~p~~~~~l~~~l~~alP~gvv~vv-  231 (543)
                      .|.....++.|+.-|++..|.-   ||- +.+...+||-.+|+.=|+-  |... .......|+-+ +.   .|+=.+. 
T Consensus        78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pS-tvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA-~~---~Gv~eIy~  152 (393)
T TIGR00069        78 PGVILGQRVRPLERVGLYVPGGRAPYPS-TVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLAAA-KL---AGVDEVYK  152 (393)
T ss_pred             CCeEEEEEEEEeheEEEEeCCCCCcchH-HHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHHHH-HH---cCCCeehh
Confidence            3445677899999999999973   444 4455678999999875544  4421 11222222211 11   1222222 


Q ss_pred             cCChHHHHHHH---hC-C-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCc--EEEcCCCCHHHHHHHHHHhhccc
Q 009109          232 EGAVAETSALL---EQ-K-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP--AVVDSTINLQVTTRRIIAGKWMA  304 (543)
Q Consensus       232 ~g~~~~~~~L~---~~-~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p--~iV~~daDl~~aa~~iv~~~~~~  304 (543)
                      -|+.....+|.   .. + ||.|+=.|..-+...=..-...-.+-   -+.|.+=  +|-+++||.+..+..++.-+= .
T Consensus       153 vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g~V~ID---~~AGPSEvlViAD~~Anp~~iAaDLLaQAE-H  228 (393)
T TIGR00069       153 VGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFGDVGID---MPAGPSEVLVIADETANPEFVAADLLSQAE-H  228 (393)
T ss_pred             cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcC---CCCCCceEEEEeCCCCCHHHHHHHHHHHhc-c
Confidence            24666556665   22 3 99999888654321111001111111   1234443  333667999999999887765 2


Q ss_pred             CCCCccccCCEEEEeCC--cHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCC
Q 009109          305 NNGQACIGVDYIITTKD--FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEK  382 (543)
Q Consensus       305 ~~Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~  382 (543)
                      ..     ..+.++|..+  +.++..+.+.+.+..+.                 ..    +.++++.++            
T Consensus       229 d~-----~a~~iLvT~s~~la~~V~~~v~~ql~~l~-----------------r~----~i~~~al~~------------  270 (393)
T TIGR00069       229 DP-----DAQAILVTTSEELAEAVQEEIERQLATLP-----------------RR----EIARKSLED------------  270 (393)
T ss_pred             CC-----CCcEEEEECCHHHHHHHHHHHHHHHHhCC-----------------hH----HHHHHHHHh------------
Confidence            22     1344555444  33444444444444331                 01    112222110            


Q ss_pred             CceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc-cceeEEECCC
Q 009109          383 QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI-SAGGIVFNDT  461 (543)
Q Consensus       383 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l-~~G~v~iN~~  461 (543)
                                             +|   .++.++|++||++++|..--- -.-|.++|+.   .+..++ ++|.|++..+
T Consensus       271 -----------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~---~~l~~I~nAGaiFlG~~  320 (393)
T TIGR00069       271 -----------------------NG---AIILVDDLEEAIEISNDYAPE-HLELQTKNPE---ELLPKIRNAGSIFLGPY  320 (393)
T ss_pred             -----------------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCHH---HHHhhcCccceeccCCC
Confidence                                   11   235568999999999985322 2457778874   445554 4799999876


Q ss_pred             cccCCCCCCCcccC----CCCCCCCcchHHHHHHhhhceEEE
Q 009109          462 IVHTTVSSLPFGGV----GESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       462 ~~~~~~~~~pfGG~----~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      +.-.....  +.|.    ..+|..|+.+..+...|...-++.
T Consensus       321 tp~a~GDY--~aG~NHvLPT~G~Ar~~sgL~v~~F~K~~s~~  360 (393)
T TIGR00069       321 TPEAAGDY--AAGPNHVLPTGGTARFYSGLSVLDFLKRITVQ  360 (393)
T ss_pred             Cchhhhhc--cCCCCcccCCCcceeecCCccHHHhccceeEE
Confidence            43111111  1122    235678888888999998877654

This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=95.55  E-value=0.062  Score=63.96  Aligned_cols=103  Identities=16%  Similarity=0.218  Sum_probs=74.5

Q ss_pred             CCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeecCChHH
Q 009109          158 TYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAE  237 (543)
Q Consensus       158 ~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~g~~~~  237 (543)
                      ..|..+..+..|.|+|+++.+-.   ...+.+++.+|++||.+|+..++.   ....+     ..||+.+.+.+.-  ..
T Consensus      1176 PTGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~---~~~~~-----~~Lp~~v~~~v~~--~~ 1242 (1318)
T PRK11809       1176 PTGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDAL---HRALV-----AALPAAVQARIQL--AK 1242 (1318)
T ss_pred             CCCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCch---hHHHH-----HhccHHHHhHhhh--cc
Confidence            35788999999999999998733   357889999999999998864443   11111     3388888776521  11


Q ss_pred             HHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEE
Q 009109          238 TSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVI  273 (543)
Q Consensus       238 ~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~  273 (543)
                      ...+...+++.|.|.|..+..+.+.++.+++--+++
T Consensus      1243 ~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809       1243 DWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred             ccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence            222222359999999999999999998887755544

>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]

Probab=95.43  E-value=3.2  Score=43.03  Aligned_cols=260  Identities=18%  Similarity=0.225  Sum_probs=142.8

Q ss_pred             CCCcceEEeecceEEEEEcC---CchhhhhhhhHHHHHhhcCCEEEEe--CCCC---ChHHHHHHHHHHhhhcCCCceEe
Q 009109          159 YPSSAEIISEPLGVVLVIST---WNYPFLLSLDPVIGAIAAGNAVVLK--PSEI---APATSSLLAKLLEDYVDNSAVRV  230 (543)
Q Consensus       159 ~~~~~~~~~~P~GVv~~i~p---~N~P~~~~~~~~~~ALaaGN~VVlK--ps~~---~p~~~~~l~~~l~~alP~gvv~v  230 (543)
                      .|-....++.|+--|++..|   .-||-.. +....||-.+|+.=|+-  |.+.   .|.+ ...++++      |+=.+
T Consensus       106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStv-LM~avPAkvAGv~~Iv~~tPp~~~gv~p~i-L~AA~~~------Gv~eI  177 (425)
T COG0141         106 PGVVLGQRWRPIERVGLYVPGGKAAYPSTV-LMNAVPAKVAGVEEIVVVTPPPKDGVNPEI-LAAARLA------GVDEV  177 (425)
T ss_pred             CCcEEEEEEEEhhheEEEccCCCcCChHHH-HHhhccHhhcCCceEEEECCCCCCCCCHHH-HHHHHHh------CcHHH
Confidence            34556778999999999999   6676544 44578999999865443  4443   2221 1222221      11111


Q ss_pred             e-cCChHHHHHHHh-----CCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCC-cEEE-cCCCCHHHHHHHHHHhhc
Q 009109          231 V-EGAVAETSALLE-----QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKS-PAVV-DSTINLQVTTRRIIAGKW  302 (543)
Q Consensus       231 v-~g~~~~~~~L~~-----~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~-p~iV-~~daDl~~aa~~iv~~~~  302 (543)
                      . -|+.....+|.-     .+||.|+=.|+.-+...  +.......-+=+. .|.+ -+|| +++||.+..+..++.-+=
T Consensus       178 y~vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v~g~V~ID~~-AGPSEvlViAD~ta~p~~vA~DLLsQAE  254 (425)
T COG0141         178 YKVGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLVSGVVGIDMI-AGPSEVLVIADETANPDFVAADLLSQAE  254 (425)
T ss_pred             HHccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHhhCCcccCCC-CCCceEEEEeCCCCCHHHHHHHHHHHhh
Confidence            1 145555566652     14999998886543211  1111111111111 2333 3333 566999999998887765


Q ss_pred             ccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCC
Q 009109          303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEK  382 (543)
Q Consensus       303 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~  382 (543)
                       .+-     ..+.|+|..+  ++|.++..+++.+....-|             ..+.+.+-+.                 
T Consensus       255 -Hd~-----~a~aiLvT~s--~~la~~v~~~v~~~l~~l~-------------~~ei~~~~l~-----------------  296 (425)
T COG0141         255 -HDP-----DAQAILVTDS--EELAEAVEAAVERQLETLP-------------RAEIARKALE-----------------  296 (425)
T ss_pred             -cCC-----CceEEEEeCc--HHHHHHHHHHHHHHHHhcc-------------HHHHHHHHHH-----------------
Confidence             221     2345666555  5566655555554321000             0111111111                 


Q ss_pred             CceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc-cceeEEECCC
Q 009109          383 QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI-SAGGIVFNDT  461 (543)
Q Consensus       383 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l-~~G~v~iN~~  461 (543)
                                            -||   .|+.++|++||++++|..-- --.-|.++|+.   .+..++ ++|.|+++.+
T Consensus       297 ----------------------~~g---~iilv~~l~ea~~~~N~~AP-EHLei~~~~p~---~~l~~I~nAGsIFlG~~  347 (425)
T COG0141         297 ----------------------NYG---AIILVDDLDEAVEISNEYAP-EHLELQTENPR---ELLGKIRNAGSIFLGHY  347 (425)
T ss_pred             ----------------------hCC---eEEEECCHHHHHHHHHhhCh-HhhhhhhcCHH---HHHHHhcccceeeecCC
Confidence                                  011   34556899999999998532 23567888875   345544 4799999986


Q ss_pred             cccCCCCCCCcccC----CCCCCCCcchHHHHHHhhhceEE
Q 009109          462 IVHTTVSSLPFGGV----GESGMGSYHGKFSFDAFSHKKAV  498 (543)
Q Consensus       462 ~~~~~~~~~pfGG~----~~SG~G~~~g~~~~~~~~~~k~v  498 (543)
                      +.-.....  ..|.    ..+|+-|+.+..++..|...-++
T Consensus       348 sPe~~GDY--~aG~NHVLPT~g~AR~~s~L~v~dF~K~~tv  386 (425)
T COG0141         348 SPESLGDY--AAGPNHVLPTSGTARFSSGLSVYDFLKRSTV  386 (425)
T ss_pred             CCcccccc--ccCCCccCCCCccchhcCCccHHHhhhHHHH
Confidence            42111111  1222    23567788888888888876554

>PRK12447 histidinol dehydrogenase; Reviewed

Probab=94.78  E-value=6.2  Score=41.25  Aligned_cols=263  Identities=15%  Similarity=0.171  Sum_probs=140.8

Q ss_pred             CCcceEEeecceEEEEEcCC---chhhhhhhhHHHHHhhcCCEEEEe--CCCCChHHHHHHHHHHhhhcCCCceEeec-C
Q 009109          160 PSSAEIISEPLGVVLVISTW---NYPFLLSLDPVIGAIAAGNAVVLK--PSEIAPATSSLLAKLLEDYVDNSAVRVVE-G  233 (543)
Q Consensus       160 ~~~~~~~~~P~GVv~~i~p~---N~P~~~~~~~~~~ALaaGN~VVlK--ps~~~p~~~~~l~~~l~~alP~gvv~vv~-g  233 (543)
                      |.....++.|+--|++..|-   -||- +.+..++||-.+|+.=|+-  |+.........|+-+ +.   .|+=.+.. |
T Consensus       106 Gv~~g~~~~Pl~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~Aa-~~---~Gv~eIy~vG  180 (426)
T PRK12447        106 GVILGHRNIPVNSVGCYVPGGRYPLVA-SAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVAAM-HL---AGADEIYVLG  180 (426)
T ss_pred             CeEEEEEEeehheEEEEeCCCCCcchH-HHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHHHH-HH---cCCCeehhcC
Confidence            44556789999999999985   3443 4455688999999875544  443211222222211 11   13222222 4


Q ss_pred             ChHHHHHHH---hC-C-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCc--EEEcCCCCHHHHHHHHHHhhcccCC
Q 009109          234 AVAETSALL---EQ-K-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP--AVVDSTINLQVTTRRIIAGKWMANN  306 (543)
Q Consensus       234 ~~~~~~~L~---~~-~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p--~iV~~daDl~~aa~~iv~~~~~~~~  306 (543)
                      +.....+|.   .. + ||.|+=.|..-+...=..-.+.-.+-   -+.|.+=  +|-+++||.+..+..++.-+= ...
T Consensus       181 GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID---~~AGPSEvlViAD~~Anp~~vAaDLLaQAE-Hd~  256 (426)
T PRK12447        181 GVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFGRVGID---LFAGPTETLVIADDTADPELVATDLLGQAE-HGP  256 (426)
T ss_pred             CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcC---CCCCCceeEEEeCCCCCHHHHHHHHHHHhc-cCC
Confidence            656556665   22 3 99999888654322111111111111   1234443  333667999999998887765 222


Q ss_pred             CCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCCcee
Q 009109          307 GQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKI  386 (543)
Q Consensus       307 Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~  386 (543)
                          . .+.++|..+  +++.+++.+++++....-|             .    .+.++++.+                 
T Consensus       257 ----~-a~~iLvT~s--~~la~~V~~~v~~ql~~l~-------------r----~~i~~~sl~-----------------  295 (426)
T PRK12447        257 ----N-SPAVLITTS--RKLAEEVLAEIERLLAILP-------------T----ADVASAAWR-----------------  295 (426)
T ss_pred             ----C-CceEEEECC--HHHHHHHHHHHHHHHHhCC-------------H----HHHHHHHHH-----------------
Confidence                1 344556444  3444544444443211000             0    111221111                 


Q ss_pred             eceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc-cceeEEECCCcccC
Q 009109          387 APTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI-SAGGIVFNDTIVHT  465 (543)
Q Consensus       387 ~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l-~~G~v~iN~~~~~~  465 (543)
                                        -+|   .++.++|++||++++|..--- -..|.++|+.   .+..++ .+|.|++..++.-.
T Consensus       296 ------------------~~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaiFlG~~sp~a  350 (426)
T PRK12447        296 ------------------DYG---EVILCDDLEEMVAEADRYASE-HVQVMTEDPD---WFLENMTNYGALFLGERTNVA  350 (426)
T ss_pred             ------------------hCC---EEEEECCHHHHHHHHHhhChH-heeehhCCHH---HHHhhcCccceeccCCCCchh
Confidence                              011   235568999999999985322 2457888874   455555 47999997654211


Q ss_pred             CCCCCCcccC----CCCCCCCcchHHHHHHhhhceEEE
Q 009109          466 TVSSLPFGGV----GESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       466 ~~~~~pfGG~----~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      ....  +.|.    ..+|..|+.|..+...|...-++.
T Consensus       351 ~GDY--~aGpNHvLPT~G~Ar~~sgLsv~~FlK~~s~~  386 (426)
T PRK12447        351 YGDK--VIGTNHVLPTSGAARYTGGLWVGKFLKTVTYQ  386 (426)
T ss_pred             hhhc--ccCCCcccCCCcceeecCCCcHHHhccceeEE
Confidence            1111  1122    235678888888999998876654

>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed

Probab=94.51  E-value=7.2  Score=40.81  Aligned_cols=263  Identities=18%  Similarity=0.215  Sum_probs=141.2

Q ss_pred             CCcceEEeecceEEEEEcCCc---hhhhhhhhHHHHHhhcCCEEEEe--CCCCChHHHHHHHHHHhhhcCCCceEeec-C
Q 009109          160 PSSAEIISEPLGVVLVISTWN---YPFLLSLDPVIGAIAAGNAVVLK--PSEIAPATSSLLAKLLEDYVDNSAVRVVE-G  233 (543)
Q Consensus       160 ~~~~~~~~~P~GVv~~i~p~N---~P~~~~~~~~~~ALaaGN~VVlK--ps~~~p~~~~~l~~~l~~alP~gvv~vv~-g  233 (543)
                      |.....++.|+--|++..|.-   ||- +.+...+||-.+|..=|+-  |..........|+-+ +.   .|+=.+.. |
T Consensus       111 Gv~~g~~~~Pi~~vG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~g~i~p~vL~AA-~~---~Gv~eIy~vG  185 (425)
T PRK00877        111 GVRLGQRWRPIERVGLYVPGGKAAYPS-SVLMNAIPAKVAGVKEIVMVTPPPDGEINPAILAAA-AL---AGVDEVYKVG  185 (425)
T ss_pred             CeEEEEEEEehHHeEEEccCCCCCchH-HHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHHHH-HH---cCCCeeeccC
Confidence            445567889999999999973   554 4555678999999875544  442111112222211 11   12222222 4


Q ss_pred             ChHHHHHHH---hC--CCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcE--EEcCCCCHHHHHHHHHHhhcccCC
Q 009109          234 AVAETSALL---EQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA--VVDSTINLQVTTRRIIAGKWMANN  306 (543)
Q Consensus       234 ~~~~~~~L~---~~--~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~--iV~~daDl~~aa~~iv~~~~~~~~  306 (543)
                      +.....+|.   ..  +||.|+=.|..-+...=..-...-.+-   -+.|.+=+  |-+++||.+..+..++.-+= .+.
T Consensus       186 GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID---~~AGPSEvlViAD~~Anp~~vAaDLLaQAE-Hd~  261 (425)
T PRK00877        186 GAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFGVVGID---MIAGPSEILVIADETADPDFVAADLLSQAE-HDP  261 (425)
T ss_pred             CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcCCcCcC---CCCCCceeEEEeCCCCCHHHHHHHHHHHhc-cCC
Confidence            666666665   22  399999888654321110001111111   12344433  33567999999999887765 222


Q ss_pred             CCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCCcee
Q 009109          307 GQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKI  386 (543)
Q Consensus       307 Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~  386 (543)
                           ..+.++|..+  +++.+++.+++.+....-|             .    .+.+.++.++                
T Consensus       262 -----~a~aiLvT~s--~~la~~V~~~v~~ql~~l~-------------r----~~ia~~sl~~----------------  301 (425)
T PRK00877        262 -----DAQSILVTTS--EELAEAVAAEVERQLATLP-------------R----AEIARASLEG----------------  301 (425)
T ss_pred             -----CCcEEEEECC--HHHHHHHHHHHHHHHHhCC-------------h----HHHHHHHHHh----------------
Confidence                 1344556544  3444444444443211000             0    1112211110                


Q ss_pred             eceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc-cceeEEECCCcccC
Q 009109          387 APTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI-SAGGIVFNDTIVHT  465 (543)
Q Consensus       387 ~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l-~~G~v~iN~~~~~~  465 (543)
                                         +|   .++.++|++||++++|..--= -..|.++|+.   .+..++ .+|.|++..++.-.
T Consensus       302 -------------------~g---~iivv~~leeai~~~N~~APE-HLel~~~~p~---~~l~~I~nAGaiFlG~~tp~a  355 (425)
T PRK00877        302 -------------------QG---AIILVDDLEEAIELSNAYAPE-HLEIQTEDPR---ALLDRIRNAGAIFLGPYTPES  355 (425)
T ss_pred             -------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCHH---HHHhhcCccceeccCCCCchh
Confidence                               11   235569999999999985322 3458888874   344444 57999997654211


Q ss_pred             CCCCCCcccC----CCCCCCCcchHHHHHHhhhceEEE
Q 009109          466 TVSSLPFGGV----GESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       466 ~~~~~pfGG~----~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      ....  +.|.    ..+|+.|+.+..+...|...-++.
T Consensus       356 ~GDY--~aGpNHvLPT~G~AR~~sgLsV~~F~K~~s~~  391 (425)
T PRK00877        356 LGDY--AAGPNHVLPTSGTARFSSGLSVYDFLKRSSVI  391 (425)
T ss_pred             hhhc--ccCCCcccCCCcceeecCCccHHHhccceeEE
Confidence            1111  1122    235778888888999998877654

>PRK13769 histidinol dehydrogenase; Provisional

Probab=94.44  E-value=6.7  Score=40.17  Aligned_cols=249  Identities=15%  Similarity=0.110  Sum_probs=135.7

Q ss_pred             CCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeec-CChHH
Q 009109          159 YPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVE-GAVAE  237 (543)
Q Consensus       159 ~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~-g~~~~  237 (543)
                      .|.....++.|+--|++..|.-|| ++.+..+.||-.+|+.=|+--+|-.......|+-+ +.   .|+=.+.. |+...
T Consensus        83 ~Gv~~g~~~~Pi~rvG~YVPa~~p-StvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~aa-~~---~Gv~eIy~vGGAQA  157 (368)
T PRK13769         83 GGVLRSVFWKPVRRAALYVPARYV-STLVMLAVPARAAGVEEIYVVTPPRGVTGELLAVA-KE---LGVKGVLAIGGPHG  157 (368)
T ss_pred             CCeEEEEEEeeeeeeEEEeccchH-HHHHHhhccHhhcCCCeEEEeCCCCCCCHHHHHHH-HH---cCCCeeecccCHHH
Confidence            344556789999999999996555 45556788999999876555333211222222211 11   12222222 45554


Q ss_pred             HHHHHhC-CCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEE
Q 009109          238 TSALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYI  316 (543)
Q Consensus       238 ~~~L~~~-~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v  316 (543)
                      ..++.-- ++|.|+=.|..-+...=..-...-.+-  +--|-.--+|+-++||.+..+..++.-+= ...     ..+.+
T Consensus       158 IAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~V~ID--~~AGPSEvlViAD~a~p~~vAaDLLaQAE-H~~-----~a~~i  229 (368)
T PRK13769        158 LAYAVFHMGVDMVAGPGGLYVQAAKYVLSQYVGID--GIEGPTELVVYAEGVPPEVAVRGALAQLE-HGP-----TSFAY  229 (368)
T ss_pred             HHHHhcCCCcCEEECCCcHHHHHHHHHHhCCcCCC--CcCCCcceEEEcCCCCHHHHHHHHHHHhh-cCC-----CCcEE
Confidence            4555533 699999888654322111111111111  11233334556566898888888877654 211     23445


Q ss_pred             EEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCCceeeceEeeCCCC
Q 009109          317 ITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPD  396 (543)
Q Consensus       317 ~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~  396 (543)
                      +|..+  +++.+++.+++++.                          +.+.       .                     
T Consensus       230 LvT~s--~~la~~V~~~v~~~--------------------------~~~~-------~---------------------  253 (368)
T PRK13769        230 LLSTD--AELLKAAEEIYRRE--------------------------RTSS-------M---------------------  253 (368)
T ss_pred             EEECC--HHHHHHHHHHHHHH--------------------------HHhc-------C---------------------
Confidence            56555  45555555544421                          1000       0                     


Q ss_pred             CCcccccccccceeeeeccCCHHHHHHHHHcCC-CCcEEEEecCCHHHHHHHHhhc-cceeEEECCCccc-----CCCCC
Q 009109          397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP-KPLAAYFFSDDEQMKKEFVQNI-SAGGIVFNDTIVH-----TTVSS  469 (543)
Q Consensus       397 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~-~gl~a~i~t~d~~~~~~~~~~l-~~G~v~iN~~~~~-----~~~~~  469 (543)
                                |- ..++.++|++||++++|..- -.|..  .+.+     .+..++ .+|.|+++.+...     ..++-
T Consensus       254 ----------~~-~~iivv~~leeai~~~N~~APEHLel--~~~~-----~~~~~i~nAGsiFl~~p~a~GDY~aGpNHv  315 (368)
T PRK13769        254 ----------GP-LEVRKVAGVEEAVRFIDEIAPEHLEV--WGRR-----EVAYRVRNVGAVSVNMPSPYLDYVAGISHV  315 (368)
T ss_pred             ----------CC-CeEEEECCHHHHHHHHHhhChHheEe--eCcH-----HHHhhCCccCChhcCCchhhhccccCCCCc
Confidence                      00 24567799999999999853 33443  3322     233344 5799999654221     11222


Q ss_pred             CCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          470 LPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       470 ~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      +|     .+|..|+.|..+...|.+.-++.
T Consensus       316 LP-----T~G~AR~~sgLsv~~FlK~~t~~  340 (368)
T PRK13769        316 LP-----TGGTARWRGIITPLTFMKPIGVA  340 (368)
T ss_pred             CC-----CCcceeccCCCcHHHcccceeEE
Confidence            22     35678888888889998776654

>PLN02926 histidinol dehydrogenase

Probab=94.26  E-value=8.2  Score=40.44  Aligned_cols=262  Identities=16%  Similarity=0.198  Sum_probs=140.7

Q ss_pred             CCcceEEeecceEEEEEcCCc---hhhhhhhhHHHHHhhcCCEEEEe--CCCCC-hHHHHHHHHHHhhhcCCCceEeec-
Q 009109          160 PSSAEIISEPLGVVLVISTWN---YPFLLSLDPVIGAIAAGNAVVLK--PSEIA-PATSSLLAKLLEDYVDNSAVRVVE-  232 (543)
Q Consensus       160 ~~~~~~~~~P~GVv~~i~p~N---~P~~~~~~~~~~ALaaGN~VVlK--ps~~~-p~~~~~l~~~l~~alP~gvv~vv~-  232 (543)
                      |.....++.|+.-|++..|.-   ||- +.+..++||-.+|..=|+-  |+... ......|+-+ +.   .|+=.+.. 
T Consensus       111 Gv~~g~~~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA-~~---~Gv~eIy~v  185 (431)
T PLN02926        111 GVRCRRVARPIGAVGLYVPGGTAVLPS-TALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLYCA-KK---AGVTHILKA  185 (431)
T ss_pred             CeEEEEEEechHHeeEeccCCCCCccH-HHHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHHHH-HH---cCCCeeecc
Confidence            445567899999999999973   444 4555688999999865444  44320 1122222211 11   12222222 


Q ss_pred             CChHHHHHHH---hC-C-CCEEEEeCChHHHHHHHHHHhcccCc--EEEe-cCCCCcE--EEcCCCCHHHHHHHHHHhhc
Q 009109          233 GAVAETSALL---EQ-K-WDKILYTGSPRVGRIVMAAAAKHLTP--VILE-LGGKSPA--VVDSTINLQVTTRRIIAGKW  302 (543)
Q Consensus       233 g~~~~~~~L~---~~-~-v~~v~ftGS~~~g~~i~~~a~~~~~~--~~le-lgG~~p~--iV~~daDl~~aa~~iv~~~~  302 (543)
                      |+.....+|.   .. + +|.|+=.|..-+...=.. ..  +.+  |-.. ..|.+=+  |-+++||.+.++..++.-+=
T Consensus       186 GGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~-v~--G~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQAE  262 (431)
T PLN02926        186 GGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMI-LQ--NSEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQAE  262 (431)
T ss_pred             CCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHH-hh--CCCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHHHhc
Confidence            4666656665   22 3 999998886543221111 11  110  1111 2344433  33567999999999887765


Q ss_pred             ccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCC
Q 009109          303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEK  382 (543)
Q Consensus       303 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~  382 (543)
                       ...     ..+.++|..+  .++.+++.+++++....-|             .    .+.++++..             
T Consensus       263 -Hdp-----~a~aiLvT~s--~~la~~V~~~v~~ql~~l~-------------r----~~i~~~sl~-------------  304 (431)
T PLN02926        263 -HGP-----DSQVVLVAVG--DVDLDAIEEEVEKQCQSLP-------------R----GEIASKALG-------------  304 (431)
T ss_pred             -cCC-----CCcEEEEECC--HHHHHHHHHHHHHHHHhCC-------------h----HHHHHHHHH-------------
Confidence             222     1344566555  3444444444443210000             0    111111110             


Q ss_pred             CceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc-cceeEEECCC
Q 009109          383 QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI-SAGGIVFNDT  461 (543)
Q Consensus       383 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l-~~G~v~iN~~  461 (543)
                                               - -.++.++|++||++++|..--- -..|.++|+.   .+..++ .+|.|++..+
T Consensus       305 -------------------------~-g~iivv~~l~ea~~~~N~~APE-HLei~~~~~~---~~l~~i~nAGaiFlG~~  354 (431)
T PLN02926        305 -------------------------H-SFIVVARDMAEAISFSNLYAPE-HLIVNVEDAE---SWLDKIDNAGSVFLGRW  354 (431)
T ss_pred             -------------------------C-CEEEEECCHHHHHHHHHhhChH-hheehhcCHH---HHHhhcCccceeccCCC
Confidence                                     0 1245669999999999985322 2458888874   445544 5799999765


Q ss_pred             cccCCCCCCCcccC----CCCCCCCcchHHHHHHhhhceEEE
Q 009109          462 IVHTTVSSLPFGGV----GESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       462 ~~~~~~~~~pfGG~----~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      +.-.....  +.|.    ..+|.+|+.|..+...|.+.-++.
T Consensus       355 sp~a~GDY--~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~  394 (431)
T PLN02926        355 TPESVGDY--ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQ  394 (431)
T ss_pred             Cchhhhcc--ccCcCcccCCCcceeecCCCcHHHhcceeeEE
Confidence            42111111  1121    234678888888999998876654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	543
1ad3_A	452	Class 3 Aldehyde Dehydrogenase Complex With Nicotin		1e-105
3sza_A	469	Crystal Structure Of Human Aldh3a1 - Apo Form Lengt		1e-101
3lv1_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		3e-66
3lns_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		9e-65
4i9b_A	517	Structure Of Aminoaldehyde Dehydrogenase 1 From Sol		5e-34
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		3e-33
3iwk_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 1		3e-32
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		3e-32
3iwj_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 2		6e-32
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		3e-30
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		7e-30
3pqa_A	486	Crystal Structure Of Glyceraldehyde-3-Phosphate Deh		2e-29
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		1e-28
2onn_A	500	Arg475gln Mutant Of Human Mitochondrial Aldehyde De		3e-27
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		3e-27
1o05_A	500	Apo Form Of Human Mitochondrial Aldehyde Dehydrogen		3e-27
1cw3_A	494	Human Mitochondrial Aldehyde Dehydrogenase Complexe		4e-27
3n81_A	500	T244a Mutant Of Human Mitochondrial Aldehyde Dehydr		1e-26
4fr8_A	500	Crystal Structure Of Human Aldehyde Dehydrogenase-2		2e-26
1zum_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		2e-26
3b4w_A	495	Crystal Structure Of Mycobacterium Tuberculosis Ald		3e-26
1nzw_A	500	Cys302ser Mutant Of Human Mitochondrial Aldehyde De		8e-26
3ty7_A	478	Crystal Structure Of Aldehyde Dehydrogenase Family		9e-26
3n80_A	500	Human Mitochondrial Aldehyde Dehydrogenase, Apo For		1e-25
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		1e-25
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		2e-25
1ag8_A	499	Aldehyde Dehydrogenase From Bovine Mitochondria Len		2e-25
3inl_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		5e-25
3jz4_C	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		6e-25
3ek1_A	504	Crystal Structure Of Aldehyde Dehydrogenase From Br		6e-25
3jz4_A	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		7e-25
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		1e-24
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		3e-24
4h7n_A	474	The Structure Of Putative Aldehyde Dehydrogenase Pu		3e-24
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		4e-24
1euh_A	475	Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase		9e-24
2w8n_A	487	The Crytal Structure Of The Oxidized Form Of Human		9e-24
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		1e-23
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		1e-23
2id2_A	475	Gapn T244s Mutant X-Ray Structure At 2.5 A Length =		2e-23
2esd_A	475	Crystal Structure Of Thioacylenzyme Intermediate Of		5e-23
3k2w_A	497	Crystal Structure Of Betaine-Aldehyde Dehydrogenase		5e-23
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		6e-23
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		6e-23
3ifg_A	484	Crystal Structure Of Succinate-Semialdehyde Dehydro		7e-23
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		7e-23
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		8e-23
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		1e-22
2w8p_A	487	The Crystal Structure Of Human C340a Ssadh Length =		2e-22
1qi1_A	475	Ternary Complex Of An Nadp Dependent Aldehyde Dehyd		3e-22
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		4e-22
3rjl_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		8e-22
2o2p_A	517	Crystal Structure Of The C-Terminal Domain Of Rat 1		2e-21
3rhm_A	517	Crystal Structure Of The E673q Mutant Of C-Terminal		4e-21
1uzb_A	516	1-pyrroline-5-carboxylate Dehydrogenase Length = 51		5e-21
2bhp_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		7e-21
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		8e-21
3rhj_A	517	Crystal Structure Of The E673a Mutant Of The C-Term		1e-20
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		2e-20
3rhr_A	517	Crystal Structure Of The C707a Mutant Of The C-Term		4e-20
4gnz_A	517	Crystal Structure Of The C707s Mutant Of C-terminal		4e-20
2bja_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		5e-20
3prl_A	505	Crystal Structure Of Nadp-Dependent Glyceraldehyde-		6e-20
3rhl_A	517	Crystal Structure Of The E673aC707A DOUBLE MUTANT O		2e-19
3ros_A	484	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		2e-19
1ky8_A	501	Crystal Structure Of The Non-Phosphorylating Glycer		7e-19
3i44_A	497	Crystal Structure Of Aldehyde Dehydrogenase From Ba		9e-19
3efv_A	462	Crystal Structure Of A Putative Succinate-Semialdeh		9e-19
1uxv_A	501	Structural Basis For Allosteric Regulation And Subs		1e-18
3r64_A	508	Crystal Structure Of A Nad-Dependent Benzaldehyde D		1e-18
1uxn_A	501	Structural Basis For Allosteric Regulation And Subs		2e-18
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		3e-18
4dal_A	498	Crystal Structure Of Putative Aldehyde Dehydrogenas		7e-18
3rh9_A	506	The Crystal Structure Of Oxidoreductase From Marino		3e-17
4dng_A	485	Crystal Structure Of Putative Aldehyde Dehydrogenas		8e-16
3haz_A	1001	Crystal Structure Of Bifunctional Proline Utilizati		2e-14
4e4g_A	521	Crystal Structure Of Putative Methylmalonate-Semial		9e-11
3ju8_A	490	Crystal Structure Of Succinylglutamic Semialdehyde		1e-10
2j6l_A	500	Structure Of Aminoadipate-Semialdehyde Dehydrogenas		3e-10
2jg7_A	510	Crystal Structure Of Seabream Antiquitin And Elucid		6e-10
4f9i_A	1026	Crystal Structure Of Proline Utilization A (Puta) F		5e-09
3v9j_A	563	Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat		1e-08
3v9g_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		2e-07
3v9h_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		2e-07
3v9i_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		4e-07

>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452

Iteration: 1
 Score =  379 bits (972), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/447 (42%), Positives = 273/447 (61%), Gaps = 7/447 (1%)
Query: 73  MKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMT 132
           +K  R  +NS KT+S ++R+ Q++++  M              DL K  + ++  E++  
Sbjct: 7   VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 66
Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXX 192
                  +KEL  W + E    +  T      I SEPLGVVLVI  WNYPF L++ P   
Sbjct: 67  LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 126
Query: 193 XXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
                    LKPSE++   + LLA L+  Y+D +   VV+G V ET+ LL++++D I+YT
Sbjct: 127 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 186
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
           GS  VG+IVMAAAAKHLTPV LELGGKSP  VD   +L V  RRI  GK+M N+GQ C+ 
Sbjct: 187 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM-NSGQTCVA 245
Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
            DYI+       ++++ L+  LK+F+G++  +S+D  RI+N  HF R+  L+D  KV+  
Sbjct: 246 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA-- 303
Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPL 432
             +GG  D+    IAPTIL+DV   S +M+EEIFGP++PIV V  +E++   I  + KPL
Sbjct: 304 --HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPL 361
Query: 433 AAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
           A Y FS++E++ K+ +   S+GG+  ND IVH TV +LPFGGVG SGMG+YHGK SF+ F
Sbjct: 362 ALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETF 421
Query: 493 SHKKAVLYRSFNGDST--TRYPPYTAE 517
           SH+++ L +S   +     RYPP  A+
Sbjct: 422 SHRRSCLVKSLLNEEAHKARYPPSPAK 448

>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469

Iteration: 1
 Score =  367 bits (941), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/452 (41%), Positives = 268/452 (59%), Gaps = 7/452 (1%)
Query: 68  KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFIS 127
           K +  +K  R  ++S +T+  ++R+ Q++++  +              DL K  +  +  
Sbjct: 19  KISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYE 78
Query: 128 EISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSL 187
           E+       +  +++L  W   E  + +  T      I SEPLGVVLVI TWNYPF L++
Sbjct: 79  EVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTI 138
Query: 188 DPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWD 247
            P            LKPSE++   +SLLA ++  Y+D     V+ G V ET+ LL++++D
Sbjct: 139 QPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFD 198
Query: 248 KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNG 307
            ILYTGS  VG+I+M AAAKHLTPV LELGGKSP  VD   +L V  RRI  GK+M N+G
Sbjct: 199 HILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFM-NSG 257
Query: 308 QACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDED 367
           Q C+  DYI+       ++++ L+  LKEF+G++  +S+D  RI++  HF R+  L++  
Sbjct: 258 QTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQ 317
Query: 368 KVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKS 427
           KV+    YGG  D     IAPTIL DV   S +M+EEIFGP+LPIV V  +E++   I  
Sbjct: 318 KVA----YGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQ 373
Query: 428 KPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF 487
           + KPLA Y FS ++++ K+ +   S+GG+  ND IVH T+ SLPFGGVG SGMGSYHGK 
Sbjct: 374 REKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKK 433
Query: 488 SFDAFSHKKAVLYRSFNGDS--TTRYPPYTAE 517
           SF+ FSH+++ L R    D     RYPP  A+
Sbjct: 434 SFETFSHRRSCLVRPLMNDEGLKVRYPPSPAK 465

>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457

Iteration: 1
 Score =  249 bits (636), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 147/453 (32%), Positives = 225/453 (49%), Gaps = 16/453 (3%)
Query: 51  SATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXX 110
           S  +  ++K M      K  SL    +  + +R T    +R   ++ +            
Sbjct: 12  SGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALY 71
Query: 111 XXXHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPL 170
               +DL KP     ++EI         AL  L  W  P    +     PS   ++ EP 
Sbjct: 72  SALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPY 131
Query: 171 GVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRV 230
           GV  +I  +NYP  L+L P            +KPSE  P TS+++ K++ +      V V
Sbjct: 132 GVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAV 191
Query: 231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINL 290
           ++G   E S LL   +D I +TGSP VG++VM AAAKHLTPV+LELGGK P +V    +L
Sbjct: 192 IQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADL 251
Query: 291 QVTTRRIIAGKWMANNGQACIGVDYI---ITTKD-FAPKLIDSLRNELKEFFGKNPMESK 346
             T  +++ GK++ N+GQ CI  DY+    + KD    +L++ ++ EL E          
Sbjct: 252 DQTVNQLMFGKFI-NSGQTCIAPDYLYVHYSVKDALLERLVERVKTELPEI--------N 302
Query: 347 DLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIF 406
              ++V      RL SLL+  +   +++ G Q D  +  ++ T++  V  +  +M EE+F
Sbjct: 303 STGKLVTERQVQRLVSLLEATQ--GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELF 360
Query: 407 GPLLPIVTVEKIEDSFD-VIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHT 465
           GP+LP++  + +  + D V K  PKPLA Y F  D  + K  +  I +G    N  ++H 
Sbjct: 361 GPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHA 420
Query: 466 TVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
               LPFGG+G SGMG YHG FS+  F+HKK+V
Sbjct: 421 FSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453

>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457

Iteration: 1
 Score =  244 bits (623), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 146/453 (32%), Positives = 224/453 (49%), Gaps = 16/453 (3%)
Query: 51  SATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXX 110
           S  +  ++K M      K  SL    +  + +R T    +R   ++ +            
Sbjct: 12  SGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALY 71
Query: 111 XXXHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPL 170
               +DL KP     ++EI         AL  L  W  P    +     PS   ++ EP 
Sbjct: 72  SALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPY 131
Query: 171 GVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRV 230
           GV  +I  +NYP  L+L P            +KPSE  P TS+++ K++ +      V V
Sbjct: 132 GVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAV 191
Query: 231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINL 290
           ++G   E S LL   +D I +TGSP VG++VM AAAKHLTPV+LELGGK P +V    +L
Sbjct: 192 IQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADL 251
Query: 291 QVTTRRIIAGKWMANNGQACIGVDYI---ITTKD-FAPKLIDSLRNELKEFFGKNPMESK 346
             T  +++ GK++ N+GQ  I  DY+    + KD    +L++ ++ EL E          
Sbjct: 252 DQTVNQLMFGKFI-NSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEI--------N 302
Query: 347 DLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIF 406
              ++V      RL SLL+  +   +++ G Q D  +  ++ T++  V  +  +M EE+F
Sbjct: 303 STGKLVTERQVQRLVSLLEATQ--GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELF 360
Query: 407 GPLLPIVTVEKIEDSFD-VIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHT 465
           GP+LP++  + +  + D V K  PKPLA Y F  D  + K  +  I +G    N  ++H 
Sbjct: 361 GPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHA 420
Query: 466 TVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
               LPFGG+G SGMG YHG FS+  F+HKK+V
Sbjct: 421 FSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453

>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517

Iteration: 1
 Score =  142 bits (358), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 162/343 (47%), Gaps = 12/343 (3%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-V 223
           ++ EPLGVV +I+ WNYP L+++              LKPSE+A  T   L ++  +  +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 224 DNSAVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
            + A+ ++ G   E    L      DKI +TGS   G  +M AAA+ + PV LELGGKSP
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLELGGKSP 279
Query: 282 AVV-DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
            VV D   NL +     + G   AN GQ C     +I  ++ A   +D L    K     
Sbjct: 280 IVVFDDIDNLDIAAEWTLFGI-FANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKIS 338
Query: 341 NPMESK-DLSRIVNPFHFARLASLLDEDKVSDK-IVYGGQRDE---KQLKIAPTILLDVP 395
           +P+E    L  +V+   + ++   +   K     I+ GG+R +   K   + PTI+ DV 
Sbjct: 339 DPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVN 398
Query: 396 DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGG 455
               I KEE+FGP+L + T +  E + ++       L A   S D +  + F +    G 
Sbjct: 399 TSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGI 458
Query: 456 IVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
           I  N +    T + LP+GG   SG G   GK+  + F + K V
Sbjct: 459 IWINCS--QPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQV 499

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score =  140 bits (352), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 161/343 (46%), Gaps = 12/343 (3%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-V 223
           ++ EPLGVV +I+ WNYP L+++              LKPSE+A  T   L ++  +  +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 224 DNSAVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
            + A+ ++ G   E    L      DKI +TGS   G  +M AAA+ + PV L LGGKSP
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLALGGKSP 279
Query: 282 AVV-DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
            VV D   NL +     + G   AN GQ C     +I  ++ A   +D L    K     
Sbjct: 280 IVVFDDIDNLDIAAEWTLFGI-FANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKIS 338
Query: 341 NPMESK-DLSRIVNPFHFARLASLLDEDKVSDK-IVYGGQRDE---KQLKIAPTILLDVP 395
           +P+E    L  +V+   + ++   +   K     I+ GG+R +   K   + PTI+ DV 
Sbjct: 339 DPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVN 398
Query: 396 DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGG 455
               I KEE+FGP+L + T +  E + ++       L A   S D +  + F +    G 
Sbjct: 399 TSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGI 458
Query: 456 IVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
           I  N +    T + LP+GG   SG G   GK+  + F + K V
Sbjct: 459 IWINCS--QPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQV 499

>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503

Iteration: 1
 Score =  136 bits (343), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 167/362 (46%), Gaps = 12/362 (3%)
Query: 150 EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAP 209
           +KA  SL      + I+ EP+GVV +I+ WNYPFL++               LKPSE+A 
Sbjct: 132 QKAPISLPMDTFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKPSELAS 191
Query: 210 ATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAA 266
            T   L ++ ++  +    + +V G   E  A L      DKI +TGS   G  +M  AA
Sbjct: 192 VTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMTTAA 251
Query: 267 KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKL 326
           + + PV LELGGKSP VV   ++L       + G +   NGQ C     +I  +  A + 
Sbjct: 252 QLVKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFF-TNGQICSATSRLIVHESIAVEF 310
Query: 327 IDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLK 385
           +D L    +     +P+E    L  IV+   + ++ + +   K     +  G R  + LK
Sbjct: 311 VDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRRPEHLK 370
Query: 386 ----IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE 441
               + PTI+ DV     I +EE+FGP+L + T    E++ ++       L +   S+D 
Sbjct: 371 KGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSNDL 430
Query: 442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF-SHKKAVLY 500
           +  +   + + AG +  N      +    P+GG+  SG G   G++  + + S K+   Y
Sbjct: 431 ERCERLSKALQAGIVWIN--CAQPSFIQAPWGGIKRSGFGRELGEWGLENYLSVKQVTRY 488
Query: 501 RS 502
            S
Sbjct: 489 TS 490

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 11/389 (2%)
Query: 118 SKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177
           S  PF+  + +I    S  +    + +     +KA  +L      + ++ +PLGVV +IS
Sbjct: 97  SGKPFDEAVLDIDDVASCFEYFAGQAEALDGKQKAPVTLPMERFKSHVLRQPLGVVGLIS 156
Query: 178 TWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVA 236
            WNYP L++               LKPSE+A  T     ++  +  +    + ++ G   
Sbjct: 157 PWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLEFGEVCNEVGLPPGVLNILTGLGP 216
Query: 237 ETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTT 294
           +  A L      DKI +TGS   G  VMA+AA+ + PV LELGGKSP VV   +++    
Sbjct: 217 DAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQLVKPVTLELGGKSPIVVFEDVDIDKVV 276
Query: 295 RRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVN 353
              I G +   NGQ C     ++  +  A + +D L    K     +P E    L  +++
Sbjct: 277 EWTIFGCFW-TNGQICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPFEEGCRLGPVIS 335
Query: 354 PFHFARLASLLDEDKVSDK-IVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPL 409
              + ++   +   K     I+YGG R E   K   I PTI+ D+     I KEE+FGP+
Sbjct: 336 KGQYDKIMKFISTAKSEGATILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPV 395
Query: 410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSS 469
           L + T    +++  +       LAA  FS+D +  +   + +  G +  N +        
Sbjct: 396 LCVKTFSSEDEAIALANDTEYGLAAAVFSNDLERCERITKALEVGAVWVNCS--QPCFVQ 453
Query: 470 LPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            P+GG+  SG G   G++    + + K V
Sbjct: 454 APWGGIKRSGFGRELGEWGIQNYLNIKQV 482

>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503

Iteration: 1
 Score =  135 bits (340), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 166/357 (46%), Gaps = 11/357 (3%)
Query: 150 EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAP 209
           +KA  SL      + ++ EP+GVV +I+ WNYP L++               LKPSE+A 
Sbjct: 132 QKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELAS 191
Query: 210 ATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAA 266
            T   L ++ ++  +    + ++ G   E  A L      DK+ +TGS   G  +M AAA
Sbjct: 192 LTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAA 251
Query: 267 KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKL 326
           + + PV LELGGKSP VV   ++L       I G +   NGQ C     +I  +  A + 
Sbjct: 252 QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFW-TNGQICSATSRLILHESIATEF 310
Query: 327 IDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSDK-IVYGGQRDE--- 381
           ++ +   +K     +P+E    L  +V+   + ++   +   K     I+ GG R E   
Sbjct: 311 LNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLK 370
Query: 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE 441
           K   I PTI+ DV  +  I +EE+FGP+L + T    E++ D+       L A   S+D 
Sbjct: 371 KGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDL 430
Query: 442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
           +  +   +   AG +  N +      +  P+GGV  SG G   G++  D +   K V
Sbjct: 431 ERCERVTKAFKAGIVWVNCS--QPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQV 485

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score =  130 bits (326), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 162/355 (45%), Gaps = 22/355 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNS 226
           EPLGV   I  WNYPF+++                KPS + P T  +LA++  E  V   
Sbjct: 154 EPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVG 213
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284
            V VV+G  AET +LL    +  K+ +TGS   G+ VM  +AK +  V LELGGKSP ++
Sbjct: 214 LVNVVQGG-AETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLI 272
Query: 285 DSTINLQVTTRRIIAGKWMAN---NGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
                L+   R    G  MAN    GQ C     +   ++  P+ ++ +    K     +
Sbjct: 273 FKDCELENAVR----GALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGD 328
Query: 342 PM--ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQ---RDEKQLK----IAPTILL 392
           P+  E++    I  P     L  +    K   +++ GG+     + +LK    ++P +L 
Sbjct: 329 PLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLD 388
Query: 393 DVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNIS 452
           +  DD T +KEEIFGP++ ++  +  E+      +    LA+  F+ D         N+ 
Sbjct: 389 NCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLE 448
Query: 453 AGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDS 507
           AG    N   +      +PFGG   SG G  +G+ + D +S  K V+    + DS
Sbjct: 449 AGTCYINTYSISPV--EVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDVDS 501

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score =  128 bits (322), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 163/341 (47%), Gaps = 10/341 (2%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYV 223
           ++ EP+GVV +I+ WN+PF+++ +             LKPSE    TS  LA+L  E  +
Sbjct: 157 VLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGI 216
Query: 224 DNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
            +    VV G       +L +    D + +TGS RVG  +   AA+ +  V LELGGK P
Sbjct: 217 PDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGP 276
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN-ELKEFFGK 340
            +V +  +L      I  G +  N GQ CI    ++  +     L + L +   K  FG 
Sbjct: 277 QIVFADADLDAAADGIAYGVYH-NAGQCCISGSRLLVQEGIRDALXERLLDISRKVAFGD 335
Query: 341 NPMESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQR--DEKQLKIAPTILLDVPDD 397
              E   +   ++  H  ++ S +     S  +++ GG+R   E  L  APT+   V  D
Sbjct: 336 PLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPD 395
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
            +I +EEIFGP+L  +T +  +++  +  +    L+A  +S + +   + ++ I AG   
Sbjct: 396 XSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCW 455
Query: 458 FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            N  I  T    LP GG  +SG+G   G++ FD +S  K V
Sbjct: 456 INSVIDGT--PELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494

>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 169/342 (49%), Gaps = 19/342 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSA 227
           EP+G+V  I+ +N+P  LS                 PS  AP     LAK++E+ +    
Sbjct: 129 EPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYN 188
Query: 228 V-----RVVEGA--VAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKS 280
           V      ++ GA  V     ++ +K + I +TGS +VG ++   A      + LELGG +
Sbjct: 189 VPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVN 246
Query: 281 PAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
           P +V    +L      +I G ++   GQ CI V  I+  +  A K I+   N+ K     
Sbjct: 247 PNIVLKDADLNKAVNALIKGSFIYA-GQVCISVGMILVDESIADKFIEMFVNKAKVLNVG 305
Query: 341 NPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPDD 397
           NP++ K D+  +++  H A     + E  + +  K++ GG+RD+      PTIL +V  D
Sbjct: 306 NPLDEKTDVGPLISVEH-AEWVEKVVEKAIDEGGKLLLGGKRDKALF--YPTIL-EVDRD 361
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
           + + K E F P++PI+   + E+  D+  S    L +  F++D     +F +N+  GG+V
Sbjct: 362 NILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVV 420
Query: 458 FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 499
            ND+ +     ++PFGGV +SG+G    K++ +  S+ K ++
Sbjct: 421 INDSSLFRQ-DNMPFGGVKKSGLGREGVKYAMEEMSNIKTII 461

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 152/339 (44%), Gaps = 11/339 (3%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNS 226
           EP+GVV +I+ WNYP L++               LKPSE+A  T   LA + ++  + + 
Sbjct: 167 EPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLELADICKEVGLPSG 226
Query: 227 AVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284
            + +V G   +  A L      DK+ +TGS   G+ +MA+AA  + PV LELGGKSP VV
Sbjct: 227 VLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIMASAAPMVKPVTLELGGKSPIVV 286
Query: 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME 344
              +++       + G +   NGQ C     ++     A K  + +    K     +P+E
Sbjct: 287 FDDVDIDKAVEWTLFGCFW-TNGQICSATSRLLIHTKIAKKFNERMVAWAKNIKVSDPLE 345
Query: 345 SK-DLSRIVNPFHFARLASLLDEDKVSDK-IVYGGQRD---EKQLKIAPTILLDVPDDST 399
               L  +V+   + ++   +   K     I+ GG R    EK   I PTI+ D+     
Sbjct: 346 EGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTIITDITTSME 405
Query: 400 IMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFN 459
           I +EE+FGP+L +      +++ ++       LA    S D +  +   + I AG I  N
Sbjct: 406 IWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCIWVN 465
Query: 460 DTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            +         P+GG   SG G   G+   D +   K V
Sbjct: 466 CS--QPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQV 502

>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 204/499 (40%), Gaps = 45/499 (9%)
Query: 19  LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRN 78
            N+ FI N  +    +  +FP ++ ++    C      +E      DV+KA   +K  R 
Sbjct: 19  CNQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARA 68
Query: 79  NYN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTK 133
            +       R   S+  R+  +  +A++              D  KP   +++ ++ M  
Sbjct: 69  AFQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV- 125
Query: 134 SSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS 186
                 LK L+Y   W      KT     P   +  S    EP+GV   I  WN+P L+ 
Sbjct: 126 ------LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQ 175
Query: 187 LDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--E 243
                          +K +E  P T+  +A L+ E       V +V G      A +   
Sbjct: 176 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASH 235
Query: 244 QKWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW 302
           +  DK+ +TGS  +GR++ +AA + +L  V LELGGKSP ++ S  ++     +     +
Sbjct: 236 EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 295
Query: 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLA 361
             N GQ C         +D   + ++      K     NP +SK +    V+   F ++ 
Sbjct: 296 F-NQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKIL 354
Query: 362 SLLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIE 419
             ++  K      +  GG   ++   I PT+  DV D  TI KEEIFGP++ I+  + IE
Sbjct: 355 GYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414
Query: 420 DSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESG 479
           +      +    LAA  F+ D        Q + AG +  N   V    S  PFGG   SG
Sbjct: 415 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSG 472
Query: 480 MGSYHGKFSFDAFSHKKAV 498
            G   G++   A++  K V
Sbjct: 473 SGQELGEYGLQAYTEVKTV 491

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 164/349 (46%), Gaps = 13/349 (3%)
Query: 161 SSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLE 220
           + ++I+ EP+GVV  I+ WNYP L +               +KPSEI P T+  + +L+E
Sbjct: 162 TESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELME 221
Query: 221 DY-VDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELG 277
           +       + ++ GA +E   ++   ++ D + +TG    G+ +M  AA ++T + LELG
Sbjct: 222 EVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELG 281
Query: 278 GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
           GK+P ++    + ++   + + G +  + GQ C     I+       K   +L + +K+ 
Sbjct: 282 GKNPNIIFDDADFELAVDQALNGGYF-HAGQVCSAGSRILVQNSIKDKFEQALIDRVKKI 340
Query: 338 FGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSDK-IVYGGQR-DEKQLK----IAPTI 390
              N  ++  ++  +++  H  ++ S +D  K     I  GG+R D   LK      PT+
Sbjct: 341 KLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTV 400
Query: 391 LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQN 450
           + +      I++EE+FGP++ +   E  +++  +       LA   FS D    +     
Sbjct: 401 ITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANK 460
Query: 451 ISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 499
           +  G +  ND   H   +  P+GG  +SG+G   GK   + +   K +L
Sbjct: 461 LKLGTVWIND--FHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507

>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500

Iteration: 1
 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 204/499 (40%), Gaps = 45/499 (9%)
Query: 19  LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRN 78
            N+ FI N  +    +  +FP ++ ++    C      +E      DV+KA   +K  R 
Sbjct: 19  CNQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARA 68
Query: 79  NYN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTK 133
            +       R   S+  R+  +  +A++              D  KP   +++ ++ M  
Sbjct: 69  AFQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV- 125
Query: 134 SSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS 186
                 LK L+Y   W      KT     P   +  S    EP+GV   I  WN+P L+ 
Sbjct: 126 ------LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQ 175
Query: 187 LDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--E 243
                          +K +E  P T+  +A L+ E       V +V G      A +   
Sbjct: 176 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASH 235
Query: 244 QKWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW 302
           +  DK+ +TGS  +GR++ +AA + +L  V LELGGKSP ++ S  ++     +     +
Sbjct: 236 EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 295
Query: 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLA 361
             N GQ C         +D   + ++      K     NP +SK +    V+   F ++ 
Sbjct: 296 F-NQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKIL 354
Query: 362 SLLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIE 419
             ++  K      +  GG   ++   I PT+  DV D  TI KEEIFGP++ I+  + IE
Sbjct: 355 GYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414
Query: 420 DSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESG 479
           +      +    LAA  F+ D        Q + AG +  N   V    S  PFGG   SG
Sbjct: 415 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSG 472
Query: 480 MGSYHGKFSFDAFSHKKAV 498
            G   G++   A++  K V
Sbjct: 473 SGRELGEYGLQAYTEVKTV 491

>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494

Iteration: 1
 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 204/498 (40%), Gaps = 45/498 (9%)
Query: 20  NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN 79
           N+ FI N  +    +  +FP ++ ++    C      +E      DV+KA   +K  R  
Sbjct: 14  NQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARAA 63
Query: 80  YN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKS 134
           +       R   S+  R+  +  +A++              D  KP   +++ ++ M   
Sbjct: 64  FQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV-- 119
Query: 135 SCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLSL 187
                LK L+Y   W      KT     P   +  S    EP+GV   I  WN+P L+  
Sbjct: 120 -----LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQA 170
Query: 188 DPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQ 244
                         +K +E  P T+  +A L+ E       V +V G      A +   +
Sbjct: 171 WKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHE 230
Query: 245 KWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
             DK+ +TGS  +GR++ +AA + +L  V LELGGKSP ++ S  ++     +     + 
Sbjct: 231 DVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFF 290
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLAS 362
            N GQ C         +D   + ++      K     NP +SK +    V+   F ++  
Sbjct: 291 -NQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILG 349
Query: 363 LLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIED 420
            ++  K      +  GG   ++   I PT+  DV D  TI KEEIFGP++ I+  + IE+
Sbjct: 350 YINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEE 409
Query: 421 SFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM 480
                 +    LAA  F+ D        Q + AG +  N   V    S  PFGG   SG 
Sbjct: 410 VVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSGS 467
Query: 481 GSYHGKFSFDAFSHKKAV 498
           G   G++   A++  K V
Sbjct: 468 GRELGEYGLQAYTEVKTV 485

>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 203/499 (40%), Gaps = 45/499 (9%)
Query: 19  LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRN 78
            N+ FI N  +    +  +FP ++ ++    C      +E      DV+KA   +K  R 
Sbjct: 19  CNQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARA 68
Query: 79  NYN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTK 133
            +       R   S+  R+  +  +A++              D  KP   +++ ++ M  
Sbjct: 69  AFQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV- 125
Query: 134 SSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS 186
                 LK L+Y   W      KT     P   +  S    EP+GV   I  WN+P L+ 
Sbjct: 126 ------LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQ 175
Query: 187 LDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--E 243
                          +K +E  P T+  +A L+ E       V +V G      A +   
Sbjct: 176 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASH 235
Query: 244 QKWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW 302
           +  DK+ + GS  +GR++ +AA + +L  V LELGGKSP ++ S  ++     +     +
Sbjct: 236 EDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 295
Query: 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLA 361
             N GQ C         +D   + ++      K     NP +SK +    V+   F ++ 
Sbjct: 296 F-NQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKIL 354
Query: 362 SLLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIE 419
             ++  K      +  GG   ++   I PT+  DV D  TI KEEIFGP++ I+  + IE
Sbjct: 355 GYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414
Query: 420 DSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESG 479
           +      +    LAA  F+ D        Q + AG +  N   V    S  PFGG   SG
Sbjct: 415 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSG 472
Query: 480 MGSYHGKFSFDAFSHKKAV 498
            G   G++   A++  K V
Sbjct: 473 SGRELGEYGLQAYTEVKTV 491

>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500

Iteration: 1
 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 205/498 (41%), Gaps = 45/498 (9%)
Query: 20  NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN 79
           N+ FI N  +    +  +FP ++ ++    C      +E      DV+KA   +K  R  
Sbjct: 20  NQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARAA 69
Query: 80  YN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKS 134
           +       R   S+  R+  +  +A++              D  KP   +++ ++ M   
Sbjct: 70  FQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV-- 125
Query: 135 SCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLSL 187
                LK L+Y   W      KT     P   +  S    EP+GV   I  WN+P L+  
Sbjct: 126 -----LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQA 176
Query: 188 DPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQ 244
                         +K +E  P T+  +A L+ E       V +V G      A +   +
Sbjct: 177 WKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHE 236
Query: 245 KWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
             DK+ +TGS  +GR++ +AA + +L  V L+LGGKSP ++ S  ++     +     + 
Sbjct: 237 DVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFF 296
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLAS 362
            N GQ+C         +D   + ++      K     NP +SK +    V+   F ++  
Sbjct: 297 -NQGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILG 355
Query: 363 LLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIED 420
            ++  K      +  GG   ++   I PT+  DV D  TI KEEIFGP++ I+  + IE+
Sbjct: 356 YINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEE 415
Query: 421 SFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM 480
                 +    LAA  F+ D        Q + AG +  N   V    S  PFGG   SG 
Sbjct: 416 VVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSGS 473
Query: 481 GSYHGKFSFDAFSHKKAV 498
           G   G++   A++  K V
Sbjct: 474 GRELGEYGLQAYTEVKTV 491

>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 201/493 (40%), Gaps = 45/493 (9%)
Query: 19  LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRN 78
            N+ FI N  +    +  +FP ++ ++    C      +E      DV+KA   +K  R 
Sbjct: 19  CNQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARA 68
Query: 79  NYN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTK 133
            +       R   S+  R+  +  +A++              D  KP   +++ ++ M  
Sbjct: 69  AFQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV- 125
Query: 134 SSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS 186
                 LK L+Y   W      KT     P   +  S    EP+GV   I  WN+P L+ 
Sbjct: 126 ------LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQ 175
Query: 187 LDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--E 243
                          +K +E  P T+  +A L+ E       V +V G      A +   
Sbjct: 176 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASH 235
Query: 244 QKWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW 302
           +  DK+ +TGS  +GR++ +AA + +L  V LELGGKSP ++ S  ++     +     +
Sbjct: 236 EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 295
Query: 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLA 361
             N GQ C         +D   + ++      K     NP +SK +    V+   F ++ 
Sbjct: 296 F-NQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKIL 354
Query: 362 SLLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIE 419
             ++  K      +  GG   ++   I PT+  DV D  TI KEEIFGP++ I+  + IE
Sbjct: 355 GYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414
Query: 420 DSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESG 479
           +      +    LAA  F+ D        Q + AG +  N   V    S  PFGG   SG
Sbjct: 415 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSG 472
Query: 480 MGSYHGKFSFDAF 492
            G   G++   A+
Sbjct: 473 SGRELGEYGLQAY 485

>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495

Iteration: 1
 Score =  116 bits (291), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 153/339 (45%), Gaps = 11/339 (3%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNS 226
           EP+GVV  I  WN P  L+++             LKP+   P T++ LA++  +  +   
Sbjct: 145 EPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEG 204
Query: 227 AVRVVEGAVAETSALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
            + VV G +    AL      D   +TGS  VGR V   AA+ L P  LELGGKS A++ 
Sbjct: 205 VLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIIL 264
Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME- 344
             ++L      ++    M N GQ C+    I+  +    +++ ++ N +       P + 
Sbjct: 265 EDVDLAAAIPMMVFSGVM-NAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDP 323
Query: 345 SKDLSRIVNPFHFARLASLLDED-KVSDKIVYGGQRDE---KQLKIAPTILLDVPDDSTI 400
           +  +  +++     R+   + +  +   ++V GG R E       I PT+  DV +  TI
Sbjct: 324 AAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTI 383
Query: 401 MKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFND 460
            +EEIFGP+L I+  +  ED+  +       LA   ++ D     +  Q I  G    N 
Sbjct: 384 AQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGIN- 442
Query: 461 TIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 499
              +      PFGG   SG+G  +G    + F+ +K+VL
Sbjct: 443 --WYAFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479

>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500

Iteration: 1
 Score =  115 bits (287), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 203/498 (40%), Gaps = 45/498 (9%)
Query: 20  NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN 79
           N+ FI N  +    +  +FP ++ ++    C      +E      DV+KA   +K  R  
Sbjct: 20  NQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARAA 69
Query: 80  YN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKS 134
           +       R   S+  R+  +  +A++              D  KP   +++ ++ M   
Sbjct: 70  FQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV-- 125
Query: 135 SCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLSL 187
                LK L+Y   W      KT     P   +  S    EP+GV   I  WN+P L+  
Sbjct: 126 -----LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQA 176
Query: 188 DPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQ 244
                         +K +E  P T+  +A L+ E       V +V G      A +   +
Sbjct: 177 WKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHE 236
Query: 245 KWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
             DK+ +TGS  +GR++ +AA + +L  V LELGGKSP ++ S  ++     +     + 
Sbjct: 237 DVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFF 296
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLAS 362
            N GQ           +D   + ++      K     NP +SK +    V+   F ++  
Sbjct: 297 -NQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILG 355
Query: 363 LLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIED 420
            ++  K      +  GG   ++   I PT+  DV D  TI KEEIFGP++ I+  + IE+
Sbjct: 356 YINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEE 415
Query: 421 SFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM 480
                 +    LAA  F+ D        Q + AG +  N   V    S  PFGG   SG 
Sbjct: 416 VVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSGS 473
Query: 481 GSYHGKFSFDAFSHKKAV 498
           G   G++   A++  K V
Sbjct: 474 GRELGEYGLQAYTEVKTV 491

>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478

Iteration: 1
 Score =  115 bits (287), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 160/348 (45%), Gaps = 23/348 (6%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-V 223
           ++ E +GV  +I+ WN+P   +               LKPSE  P  + +LA++ +   V
Sbjct: 135 VVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGV 194
Query: 224 DNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
                 +V G  A     L +  K     +TGS   G  +   AAK    V LELGGKSP
Sbjct: 195 PKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAAKDFKKVSLELGGKSP 254
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAP-KLIDSLRNELKEFFGK 340
            +V   ++++    +   GK + N GQ C        T+   P K+ D+   ELKE F +
Sbjct: 255 YIVLDDVDIK-EAAKATTGKVVNNTGQVCTA-----GTRVLVPNKIKDAFLAELKEQFSQ 308
Query: 341 ----NPME-SKDLSRIVNPFHFARLASLLDED-KVSDKIVYGG----QRDEKQLKIAPTI 390
               NP E    +  I++   F ++ + +++  +   ++ YGG    +  EK     PTI
Sbjct: 309 VRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTI 368
Query: 391 LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQN 450
            ++V +  TI +EEIFGP+  ++T   ++++  +       LA Y    D++   +  ++
Sbjct: 369 FINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARS 428
Query: 451 ISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
           I AG +  N+         LPFGG  +SG+G   G +  + F   K++
Sbjct: 429 IEAGTVEINEA---GRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSI 473

>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 203/498 (40%), Gaps = 45/498 (9%)
Query: 20  NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN 79
           N+ FI N  +    +  +FP ++ ++    C      +E      DV+KA   +K  R  
Sbjct: 20  NQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARAA 69
Query: 80  YN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKS 134
           +       R   S+  R+  +  +A++              D  KP   +++ ++ M   
Sbjct: 70  FQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV-- 125
Query: 135 SCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLSL 187
                LK L+Y   W      KT     P   +  S    EP+GV   I  WN+P L+  
Sbjct: 126 -----LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQA 176
Query: 188 DPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQ 244
                         +K +E  P T+  +A L+ E       V +V G      A +   +
Sbjct: 177 WKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHE 236
Query: 245 KWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
             DK+ +TGS  +GR++ +AA + +L  V LELGGKSP ++ S  ++     +     + 
Sbjct: 237 DVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFF 296
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLAS 362
            N GQ           +D   + ++      K     NP +SK +    V+   F ++  
Sbjct: 297 -NQGQCXCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILG 355
Query: 363 LLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIED 420
            ++  K      +  GG   ++   I PT+  DV D  TI KEEIFGP++ I+  + IE+
Sbjct: 356 YINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEE 415
Query: 421 SFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM 480
                 +    LAA  F+ D        Q + AG +  N   V    S  PFGG   SG 
Sbjct: 416 VVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSGS 473
Query: 481 GSYHGKFSFDAFSHKKAV 498
           G   G++   A++  K V
Sbjct: 474 GRELGEYGLQAYTEVKTV 491

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 158/348 (45%), Gaps = 26/348 (7%)
Query: 170 LGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSAV 228
           LGV   I  WN+PF L                +KPSE  P  +   AK++++  +     
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 229 RVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286
            +V G        L    K   +  TGS   G  +MA AAK++T V LELGGK+PA+V  
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD 262
Query: 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK 346
             +L++  + I+  + + N+GQ C   + +   K    + ++ L   ++     NP E  
Sbjct: 263 DADLELAVKAIVDSR-VINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 347 DLSR--IVNPFHFARLASLLDEDKVSD------KIVYGGQRDE-KQLKIAPTILLDVPDD 397
           D++   ++N     R+     E KV+       ++ +GG+  E K     PT+LLDV  +
Sbjct: 322 DIAMGPLINAAALERV-----EQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQE 376
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
            +IM EE FGP+LP+V  + +ED+  +       L +  ++ +  +  + ++     G+ 
Sbjct: 377 MSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIK-----GLK 431
Query: 458 FNDTIVHTTVSSLPFG---GVGESGMGSYHGKFSFDAFSHKKAVLYRS 502
           F +T ++        G   G  +SG+G   GK     +   + V  +S
Sbjct: 432 FGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQS 479

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 158/348 (45%), Gaps = 26/348 (7%)
Query: 170 LGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSAV 228
           LGV   I  WN+PF L                +KPSE  P  +   AK++++  +     
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 229 RVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286
            +V G        L    K   +  TGS   G  +MA AAK++T V LELGGK+PA+V  
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVXLELGGKAPAIVMD 262
Query: 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK 346
             +L++  + I+  + + N+GQ C   + +   K    + ++ L   ++     NP E  
Sbjct: 263 DADLELAVKAIVDSR-VINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 347 DLSR--IVNPFHFARLASLLDEDKVSD------KIVYGGQRDE-KQLKIAPTILLDVPDD 397
           D++   ++N     R+     E KV+       ++ +GG+  E K     PT+LLDV  +
Sbjct: 322 DIAMGPLINAAALERV-----EQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQE 376
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
            +IM EE FGP+LP+V  + +ED+  +       L +  ++ +  +  + ++     G+ 
Sbjct: 377 MSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIK-----GLK 431
Query: 458 FNDTIVHTTVSSLPFG---GVGESGMGSYHGKFSFDAFSHKKAVLYRS 502
           F +T ++        G   G  +SG+G   GK     +   + V  +S
Sbjct: 432 FGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQS 479

>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499

Iteration: 1
 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 166/400 (41%), Gaps = 28/400 (7%)
Query: 116 DLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----E 168
           D  KP   +++ ++ M        LK L+Y   W      KT     P   +  S    E
Sbjct: 108 DNGKPYIISYLVDLDMV-------LKCLRYYAGWADKYHGKT----IPIDGDYFSYTRHE 156
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSA 227
           P+GV   I  WN+P L+                +K +E  P T+  +A L+ E       
Sbjct: 157 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGV 216
Query: 228 VRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAVV 284
           V V+ G      A +   +  DK+ +TGS  VG ++  AA K +L  V LE+GGKSP ++
Sbjct: 217 VNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNII 276
Query: 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME 344
            S  ++     +     +  N GQ C         +D   + ++      K     NP +
Sbjct: 277 MSDADMDWAVEQAHFALFF-NQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFD 335
Query: 345 SK-DLSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIM 401
           S+ +    V+   F ++   +   K      +  GG   ++   I PT+  D+ D  TI 
Sbjct: 336 SRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAADRGYFIQPTVFGDLQDGMTIA 395
Query: 402 KEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDT 461
           KEEIFGP++ I+  + +E+      +    LAA  F+ D        Q + AG +  N  
Sbjct: 396 KEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY 455
Query: 462 IVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 501
            V    S  PFGG   SG G   G++   A++  K V  R
Sbjct: 456 DVFGAQS--PFGGYKLSGSGRELGEYGLQAYTEVKTVTVR 493

>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500

Iteration: 1
 Score =  112 bits (280), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 200/492 (40%), Gaps = 45/492 (9%)
Query: 20  NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN 79
           N+ FI N  +    +  +FP ++ ++    C      +E      DV+KA   +K  R  
Sbjct: 20  NQIFINN-EWHDAVSRKTFPTVNPSTGEVICQVAEGDKE------DVDKA---VKAARAA 69
Query: 80  YN-----SRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKS 134
           +       R   S+  R+  +  +A++              D  KP   +++ ++ M   
Sbjct: 70  FQLGSPWRRMDASHRGRL--LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV-- 125
Query: 135 SCKLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLSL 187
                LK L+Y   W      KT     P   +  S    EP+GV   I  WN+P L+  
Sbjct: 126 -----LKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQA 176
Query: 188 DPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQ 244
                         +K +E  P T+  +A L+ E       V +V G      A +   +
Sbjct: 177 WKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHE 236
Query: 245 KWDKILYTGSPRVGRIV-MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
             DK+ +TGS  +GR++ +AA + +L  V LELGGKSP ++ S  ++     +     + 
Sbjct: 237 DVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFF 296
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLAS 362
            N GQ           +D   + ++      K     NP +SK +    V+   F ++  
Sbjct: 297 -NQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILG 355
Query: 363 LLDEDKVSDK--IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIED 420
            ++  K      +  GG   ++   I PT+  DV D  TI KEEIFGP++ I+  + IE+
Sbjct: 356 YINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEE 415
Query: 421 SFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM 480
                 +    LAA  F+ D        Q + AG +  N   V    S  PFGG   SG 
Sbjct: 416 VVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQS--PFGGYKMSGS 473
Query: 481 GSYHGKFSFDAF 492
           G   G++   A+
Sbjct: 474 GRELGEYGLQAY 485

>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  112 bits (279), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 150/337 (44%), Gaps = 15/337 (4%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYV 223
           +I +P+GV   I+ WN+P  +                LKP+   P ++  LA+L +   V
Sbjct: 141 VIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGV 200
Query: 224 DNSAVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
                 VV G+       L       K+ +TGS  +GR +M   AK +  V LELGG +P
Sbjct: 201 PAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 260
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL-KEFFGK 340
            +V    +L       +A K+  N GQ C+  + +        +  + L+  + K   G 
Sbjct: 261 FIVFDDADLDKAVEGALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGD 319
Query: 341 NPMESKDLSRIVNPFHFARLAS-LLDEDKVSDKIVYGGQRDEKQLKI-APTILLDVPDDS 398
                  +  +++    A++   + D  +   ++V GG+  E+      PTIL+DVP ++
Sbjct: 320 GLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANA 379
Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKP---LAAYFFSDDEQMKKEFVQNISAGG 455
            + KEE FGPL P+    + +D  DVI         LAAYF++ D        + +  G 
Sbjct: 380 KVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGI 436
Query: 456 IVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
           +  N  I+   V+  PFGG+  SG+G    K+  + +
Sbjct: 437 VGINTGIISNEVA--PFGGIKASGLGREGSKYGIEDY 471

>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504

Iteration: 1
 Score =  112 bits (279), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 151/340 (44%), Gaps = 15/340 (4%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-V 223
           +I +P+GV   I+ WN+P  +                ++P+++ P T+  L  L E   +
Sbjct: 164 VIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGI 223
Query: 224 DNSAVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
               +++V G   E  A L       K+ +TGS  VGR++MA  A  +  + LELGG +P
Sbjct: 224 PAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAP 283
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
            +V    +L       +  K+  N GQ C+  + I   +    K  + L  ++KE    N
Sbjct: 284 FIVFDDADLDAAVDGAMVSKYR-NAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGN 342
Query: 342 PMESKDLSRIVNPFHFARLASLLD---EDKVSD--KIVYGGQRDEKQLKIAPTILLDVPD 396
             E      ++ P    +  + +    ED VS   K++ GG ++   L   P IL  V  
Sbjct: 343 GTEP---GVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGG-KELGGLFFEPGILTGVTS 398
Query: 397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGI 456
           D  + KEE FGPL P+   +  E+           LAAYF++++        + +  G +
Sbjct: 399 DMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMV 458
Query: 457 VFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKK 496
             N  ++   V+  PFGGV +SG+G    K+  + +   K
Sbjct: 459 GHNTGLISNEVA--PFGGVKQSGLGREGSKYGIEEYLETK 496

>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  112 bits (279), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 150/337 (44%), Gaps = 15/337 (4%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYV 223
           +I +P+GV   I+ WN+P  +                LKP+   P ++  LA+L +   V
Sbjct: 141 VIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGV 200
Query: 224 DNSAVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
                 VV G+       L       K+ +TGS  +GR +M   AK +  V LELGG +P
Sbjct: 201 PAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 260
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL-KEFFGK 340
            +V    +L       +A K+  N GQ C+  + +        +  + L+  + K   G 
Sbjct: 261 FIVFDDADLDKAVEGALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGD 319
Query: 341 NPMESKDLSRIVNPFHFARLAS-LLDEDKVSDKIVYGGQRDEKQLKI-APTILLDVPDDS 398
                  +  +++    A++   + D  +   ++V GG+  E+      PTIL+DVP ++
Sbjct: 320 GLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANA 379
Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKP---LAAYFFSDDEQMKKEFVQNISAGG 455
            + KEE FGPL P+    + +D  DVI         LAAYF++ D        + +  G 
Sbjct: 380 KVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGI 436
Query: 456 IVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
           +  N  I+   V+  PFGG+  SG+G    K+  + +
Sbjct: 437 VGINTGIISNEVA--PFGGIKASGLGREGSKYGIEDY 471

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 157/348 (45%), Gaps = 26/348 (7%)
Query: 170 LGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSAV 228
           LGV   I  WN+PF L                +KPSE  P  +   AK++++  +     
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 229 RVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286
            +V G        L    K   +  TGS   G  +MA AAK++T V LELGGK+PA+V  
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD 262
Query: 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK 346
             +L++  + I+  + + N+GQ C   + +   K    + ++ L   ++     NP E  
Sbjct: 263 DADLELAVKAIVDSR-VINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 347 DLSR--IVNPFHFARLASLLDEDKVSD------KIVYGGQRDE-KQLKIAPTILLDVPDD 397
           D++   ++N     R+     E KV+       ++  GG+  E K     PT+LLDV  +
Sbjct: 322 DIAMGPLINAAALERV-----EQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQE 376
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
            +IM EE FGP+LP+V  + +E++  +       L +  ++ +  +  + ++     G+ 
Sbjct: 377 MSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNVAMKAIK-----GLK 431
Query: 458 FNDTIVHTTVSSLPFG---GVGESGMGSYHGKFSFDAFSHKKAVLYRS 502
           F +T ++        G   G  +SG+G   GK     +   + V  +S
Sbjct: 432 FGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQS 479

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 153/341 (44%), Gaps = 14/341 (4%)
Query: 167 SEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDN 225
           SEP+GV   I  WN+P L+ L              +KP+E  P T+  +  L+ E     
Sbjct: 157 SEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPP 216
Query: 226 SAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPA 282
             V +V G      A +    D  K+ +TGS  VG+++  AA K +L  V LELGGKSP 
Sbjct: 217 GVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPC 276
Query: 283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNP 342
           +V +  +L         G +  + GQ CI    +   +    + +       K++   NP
Sbjct: 277 IVFADADLDNAVEFAHQGVFY-HQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNP 335
Query: 343 MESKDLSR--IVNPFHFARLASLLDEDKVSDKIVY--GGQRDEKQLKIAPTILLDVPDDS 398
           + +  +S+   ++   + ++  L++  K     +   GG    K   I PT+  DV DD 
Sbjct: 336 L-TPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDM 394
Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVF 458
            I KEEIFGP+  I+  + ++D      +    L+A  F++D          + +G +  
Sbjct: 395 RIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWV 454
Query: 459 NDTIVHTTVSS-LPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
           N    ++ VS+  PFGG   SG G   G++ F  ++  K V
Sbjct: 455 N---CYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492

>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 155/351 (44%), Gaps = 30/351 (8%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAV 228
           P  +V VIS WN+P  LS               +KPSEIAP   + L   L    +   V
Sbjct: 126 PYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAPRFVAPLLXALNTVPELRDV 185
Query: 229 RV-VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDST 287
            + VEG   ET A L    D + +TGS   GR V   AA+   P  LELGGK PA+V  +
Sbjct: 186 LIFVEGG-GETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLES 244
Query: 288 INLQVTTRRIIAGKWMANNGQACIGVD--YIITTK--DFAPKLID-----SLRNELKEFF 338
            NL++ T  I+ G  + N GQ+C+ ++  Y+  +K  +F  +LI       L   L E  
Sbjct: 245 ANLELATSAILWGA-VVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDG 303
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE--KQLKIAPTILLDVPD 396
              P+ ++  + I+N         +LD  +    I  GG+ +E        PT+  +V  
Sbjct: 304 AIGPIIAEKQAGIIND-------HILDAVEKGAVIHCGGKVEELGGGWWCRPTVXTNVNH 356
Query: 397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGI 456
              +  EE FGP+ P+     +E++  +       L+A  F+  E    +  + ++AG I
Sbjct: 357 SXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAI 416
Query: 457 VFNDTIVHTTV-----SSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS 502
             ND  +         ++  F G+G    GS  G      F  K+A L ++
Sbjct: 417 SINDAALTAXXHEGEKNAFNFSGLG----GSRVGAAGLKRFLRKQAFLIKT 463

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 153/339 (45%), Gaps = 13/339 (3%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSA 227
           PLGV + I  WNYP  ++                KPSE  P  +  +A++L E  +    
Sbjct: 150 PLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGL 209
Query: 228 VRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
             V++G   +T  LL    D  K+  TGS   GR V AAAA HL  V +ELGGKSP +V 
Sbjct: 210 FNVIQGD-RDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVF 268
Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME- 344
              +++      + G +  ++GQ C     +   K    + +++L+   +     +P++ 
Sbjct: 269 DDADIESAVGGAMLGNFY-SSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDY 327
Query: 345 SKDLSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDE---KQLKIAPTILLDVPDDST 399
           +  L  +V+     ++ S +++ K      I  GG  +    +   + PT+  DV DD T
Sbjct: 328 ATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMT 387
Query: 400 IMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFN 459
           I +EEIFGP++ ++  +  ++      +    LA   F+ D       V  + AG +  N
Sbjct: 388 IAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWIN 447
Query: 460 DTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
               +     +PFGG  +SG G  +   + + +S  K V
Sbjct: 448 --TYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV 484

>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475

Iteration: 1
 Score =  108 bits (269), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 185/419 (44%), Gaps = 11/419 (2%)
Query: 87  SYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKSSCKLALKE-LKY 145
           SY  R + +  +A++             K+++K  +++ +SE+  T      A +E L+ 
Sbjct: 60  SYIERAAYLHKVADILMRDKEKIGAILSKEVAKG-YKSAVSEVVRTAEIINYAAEEGLRM 118
Query: 146 WTKP-EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKP 204
             +  E       +    A +  EP+G+VL IS +NYP  L+                KP
Sbjct: 119 EGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKP 178
Query: 205 SEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIV 261
                 +  LLA+   E  +       + G  +E    +   Q  + I +TGS  +G  +
Sbjct: 179 PTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 238
Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
              A   + P++LELGGK  A+V    +L++T + IIAG +   +GQ C  V  ++  + 
Sbjct: 239 GKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMES 295
Query: 322 FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE 381
            A +L++ +R ++      NP +  D++ +++      +  L+++            + E
Sbjct: 296 VADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE 441
             L I P +   V  D  +  EE FGP+LPI+ V  +E++ ++       L A  F++D 
Sbjct: 356 GNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDF 414
Query: 442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
                  + +  G +  N+     T  + PF G  +SG G    K+S +A +  K+V++
Sbjct: 415 PRAFGIAEQLEVGTVHINNKTQRGT-DNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472

>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487

Iteration: 1
 Score =  108 bits (269), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 153/353 (43%), Gaps = 23/353 (6%)
Query: 163 AEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY 222
           A ++ +P+GV  VI+ WN+P  +                +KP+E  P ++  LA+L    
Sbjct: 140 ALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQA 199
Query: 223 VDNSAVRVV----------EGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPV 272
              S V  V           G    T  L+     KI +TGS   G+I++  AA  +  V
Sbjct: 200 GIPSGVYNVIPCSRKNAKEVGEAICTDPLV----SKISFTGSTTTGKILLHHAANSVKRV 255
Query: 273 ILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332
            +ELGG +P +V  + N+       +A K+  N GQ C+  +  +  +      + +   
Sbjct: 256 SMELGGLAPFIVFDSANVDQAVAGAMASKFR-NTGQTCVCSNQFLVQRGIHDAFVKAFAE 314
Query: 333 ELKEFF--GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDEKQLKI-A 387
            +K+    G    E      ++N     ++   ++ D VS    +V GG+R +       
Sbjct: 315 AMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVN-DAVSKGATVVTGGKRHQLGKNFFE 373
Query: 388 PTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEF 447
           PT+L +V  D     EE FGPL P++  +  E++  +  +    LA YF+S D       
Sbjct: 374 PTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRV 433
Query: 448 VQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
            + +  G +  N+ ++ +     PFGGV +SG+G    K+  D +   K V Y
Sbjct: 434 AEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEYLELKYVCY 484

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 157/345 (45%), Gaps = 20/345 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNS 226
           EPLGVV  I  WNYP  ++L               KPSE+ P T+  LA++  E  V + 
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 227 AVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKH-LTPVILELGGKSPAV 283
              V+ G+  E    L +    +KI +TG    G+ VMA+A+   L  V +ELGGKSP +
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 284 VDSTINLQVTTRRIIAGKWMAN---NGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
           +    +L       +    MAN   +GQ C     +   +    +    +   ++     
Sbjct: 261 IFPDADLDRAADIAV----MANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLG 316
Query: 341 NPM-ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE-----KQLKIAPTILLD 393
           +P  E+ +   +V+  H   +   ++  K    +++ GG+R       K   +APT+  D
Sbjct: 317 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTD 376
Query: 394 VPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA 453
             DD TI++EEIFGP++ I+  +  +++          LAA   + D       +  + A
Sbjct: 377 CRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEA 436
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            GI + +T   +  + +P GG  +SG+G  +G  +   ++  K+V
Sbjct: 437 -GICWINTWGESP-AEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 157/345 (45%), Gaps = 20/345 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNS 226
           EPLGVV  I  WNYP  ++L               KPSE+ P T+  LA++  E  V + 
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 227 AVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKH-LTPVILELGGKSPAV 283
              V+ G+  E    L +    +KI +TG    G+ VMA+A+   L  V +ELGGKSP +
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 259
Query: 284 VDSTINLQVTTRRIIAGKWMAN---NGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
           +    +L       +    MAN   +GQ C     +   +    +    +   ++     
Sbjct: 260 IFPDADLDRAADIAV----MANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLG 315
Query: 341 NPM-ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE-----KQLKIAPTILLD 393
           +P  E+ +   +V+  H   +   ++  K    +++ GG+R       K   +APT+  D
Sbjct: 316 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTD 375
Query: 394 VPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA 453
             DD TI++EEIFGP++ I+  +  +++          LAA   + D       +  + A
Sbjct: 376 CRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEA 435
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            GI + +T   +  + +P GG  +SG+G  +G  +   ++  K+V
Sbjct: 436 -GICWINTWGESP-AEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478

>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475

Iteration: 1
 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 185/419 (44%), Gaps = 11/419 (2%)
Query: 87  SYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKSSCKLALKE-LKY 145
           SY  R + +  +A++             K+++K  +++ +SE+  T      A +E L+ 
Sbjct: 60  SYIERAAYLHKVADILMRDKEKIGAILSKEVAKG-YKSAVSEVVRTAEIINYAAEEGLRM 118
Query: 146 WTKP-EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKP 204
             +  E       +    A +  EP+G+VL IS +NYP  L+                KP
Sbjct: 119 EGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKP 178
Query: 205 SEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIV 261
                 +  LLA+   E  +       + G  +E    +   Q  + I ++GS  +G  +
Sbjct: 179 PTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERI 238
Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
              A   + P++LELGGK  A+V    +L++T + IIAG +   +GQ C  V  ++  + 
Sbjct: 239 GKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMES 295
Query: 322 FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE 381
            A +L++ +R ++      NP +  D++ +++      +  L+++            + E
Sbjct: 296 VADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE 441
             L I P +   V  D  +  EE FGP+LPI+ V  +E++ ++       L A  F++D 
Sbjct: 356 GNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDF 414
Query: 442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
                  + +  G +  N+     T  + PF G  +SG G    K+S +A +  K+V++
Sbjct: 415 PRAFGIAEQLEVGTVHINNKTQRGT-DNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472

>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 184/419 (43%), Gaps = 11/419 (2%)
Query: 87  SYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKSSCKLALKE-LKY 145
           SY  R + +  +A++             K+++K  +++ +SE+  T      A +E L+ 
Sbjct: 60  SYIERAAYLHKVADILMRDKEKIGAILSKEVAKG-YKSAVSEVVRTAEIINYAAEEGLRM 118
Query: 146 WTKP-EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKP 204
             +  E       +    A +  EP+G+VL IS +NYP  L+                KP
Sbjct: 119 EGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKP 178
Query: 205 SEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIV 261
                 +  LLA+   E  +       + G  +E    +   Q  + I +TGS  +G  +
Sbjct: 179 PTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 238
Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
              A   + P++L LGGK  A+V    +L++T + IIAG +   +GQ C  V  ++  + 
Sbjct: 239 GKMAG--MRPIMLALGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMES 295
Query: 322 FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE 381
            A +L++ +R ++      NP +  D++ +++      +  L+++            + E
Sbjct: 296 VADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE 441
             L I P +   V  D  +  EE FGP+LPI+ V  +E++ ++       L A  F++D 
Sbjct: 356 GNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDF 414
Query: 442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
                  + +  G +  N+     T  + PF G  +SG G    K+S +A +  K+V++
Sbjct: 415 PRAFGIAEQLEVGTVHINNKTQRGT-DNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472

>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497

Iteration: 1
 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 154/351 (43%), Gaps = 21/351 (5%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSA 227
           P GVV+ I+ WN+P  L+               LKP++  P  ++ L ++  E  + +  
Sbjct: 148 PRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGV 207
Query: 228 VRVVEG---AVAETSALLEQKWDKIL-YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283
           + V+ G    V +T  L E    K++  TGS   G+ +   +A+++TPV+LELGGK+P V
Sbjct: 208 LNVINGTGSVVGQT--LCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMV 265
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
           V    +L       + G++ AN GQ C  V+ +        + +      +K     +PM
Sbjct: 266 VMDDADLDKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPM 324
Query: 344 ES-KDLSRIVNPFHFARLASLLDED-KVSDKIVYGGQRD-----EKQLKIAPTILLDVPD 396
           ++   +    N      +  ++ E  K    +  GG+       E      PT+L+DV  
Sbjct: 325 DADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQ 384
Query: 397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGI 456
           D+ ++ EE FGP+LPIV V  +E + +        L+AY  +       + + ++  G +
Sbjct: 385 DNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEV 444
Query: 457 VFNDTI--VHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNG 505
             N  +   H    +    G  +SG G   GKF  + +  KK V      G
Sbjct: 445 YINRGMGEQHQGFHN----GWKQSGFGGEDGKFGLEQYLEKKTVYINEAEG 491

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 159/347 (45%), Gaps = 24/347 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNS 226
           EPLGVV  I  WNYP  ++L               KPSE+ P T+  LA++  E  V + 
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 227 AVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKH-LTPVILELGGKSPAV 283
              V+ G+  E    L +    +KI +TG    G+ VMA+A+   L  V +ELGGKSP +
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 284 V------DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
           +      D   ++ V      +G+   N  +  I   +      F  K+++ ++   +  
Sbjct: 261 IFPDADLDRAADIAVMANFFSSGQVXTNGTRVFI---HRSQQARFEAKVLERVQ---RIR 314
Query: 338 FGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE-----KQLKIAPTIL 391
            G    E+ +   +V+  H   +   ++  K    +++ GG+R       K   +APT+ 
Sbjct: 315 LGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVF 374
Query: 392 LDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI 451
            D  DD TI++EEIFGP++ I+  +  +++          LAA   + D       +  +
Sbjct: 375 TDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRL 434
Query: 452 SAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            A GI + +T   +  + +P GG  +SG+G  +G  +   ++  K+V
Sbjct: 435 EA-GICWINTWGESP-AEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 157/344 (45%), Gaps = 18/344 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNS 226
           EPLGVV  I  WNYP  ++L               KPSE+ P T+  LA++  E  V + 
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 227 AVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKH-LTPVILELGGKSPAV 283
              V+ G+  E    L +    +KI +TG    G+ VMA+A+   L  V +ELGGKSP +
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD---FAPKLIDSLRNELKEFFGK 340
           +    +L       +   + ++   A  G    I       F  K+++ ++   +   G 
Sbjct: 261 IFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQARFEAKVLERVQ---RIRLGD 317
Query: 341 NPMESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE-----KQLKIAPTILLDV 394
              E+ +   +V+  H   +   ++  K    +++ GG+R       K   +APT+  D 
Sbjct: 318 PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDC 377
Query: 395 PDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAG 454
            DD TI++EEIFGP++ I+  +  +++          LAA   + D       +  + A 
Sbjct: 378 RDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEA- 436
Query: 455 GIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
           GI + +T   +  + +P GG  +SG+G  +G  +   ++  K+V
Sbjct: 437 GICWINTWGESP-AEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479

>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484

Iteration: 1
 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 148/358 (41%), Gaps = 14/358 (3%)
Query: 146 WTKPEKAKTSLTTYPSSAE-----IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXX 200
           W   E  + +  T P+        ++ EP+GV   I+ WN+P  +               
Sbjct: 120 WFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPI 179
Query: 201 XLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG--AVAETSALLEQKWDKILYTGSPRV 257
            +KP+E  P ++  +A L E   V    + VV G      T         K+ +TGS  V
Sbjct: 180 VVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAV 239
Query: 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317
           GR++MA +A  +  + LELGG +P +V    +L       IA K+  NNGQ C+  +   
Sbjct: 240 GRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYR-NNGQTCVCTNRFF 298
Query: 318 TTKDFAPKLIDSLRNELKEF-FGKNPMESKDLSRIVNPFHFARLAS-LLDEDKVSDKIVY 375
             +       D L   + +   G+       L  ++N     ++ S + D       ++ 
Sbjct: 299 VHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMT 358
Query: 376 GGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAA 434
           GG+R         PT+L  V  D  + KEE FGPL P+      E+   +       LAA
Sbjct: 359 GGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAA 418
Query: 435 YFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF 492
           Y +S D        + +  G +  N  ++   V+  PFGGV +SG+G     +  D +
Sbjct: 419 YLYSRDIGRVWRVAEALEYGMVGINTGLISNEVA--PFGGVKQSGLGREGSHYGIDDY 474

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 156/345 (45%), Gaps = 20/345 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNS 226
           EPLGVV  I  WNYP  ++L               KPSE+ P T+  LA++  E  V + 
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 227 AVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKH-LTPVILELGGKSPAV 283
              V+ G+  E    L +    +KI +TG    G+ VMA+A+   L  V + LGGKSP +
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMALGGKSPLI 259
Query: 284 VDSTINLQVTTRRIIAGKWMAN---NGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
           +    +L       +    MAN   +GQ C     +   +    +    +   ++     
Sbjct: 260 IFPDADLDRAADIAV----MANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLG 315
Query: 341 NPM-ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE-----KQLKIAPTILLD 393
           +P  E+ +   +V+  H   +   ++  K    +++ GG+R       K   +APT+  D
Sbjct: 316 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTD 375
Query: 394 VPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA 453
             DD TI++EEIFGP++ I+  +  +++          LAA   + D       +  + A
Sbjct: 376 CRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEA 435
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            GI + +T   +  + +P GG  +SG+G  +G  +   ++  K+V
Sbjct: 436 -GICWINTWGESP-AEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score =  105 bits (261), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 179/457 (39%), Gaps = 22/457 (4%)
Query: 56  AEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHK 115
            E ++  + DV+KA    +E     +  +T     R   I  +A++              
Sbjct: 50  CEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESI 109
Query: 116 DLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIIS----EPLG 171
           +  K     F S   M    C  AL+    W      K    T P   E  S    EP+G
Sbjct: 110 NAGK----VFASAYLMDLDYCIKALRYCAGWAD----KIQGRTIPVDGEFFSYTRHEPIG 161
Query: 172 VVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSAVRV 230
           V  +I  WN P +L                +KP+E  P T+  +A L+ E       V +
Sbjct: 162 VCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNI 221
Query: 231 VEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDST 287
           V G      A +    D  K+ +TGS  VG+++  AAAK +L  V LELG K+P +V + 
Sbjct: 222 VPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFAD 281
Query: 288 INLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SK 346
            +L         G +  N GQ+CI    +   +    + +       K++   NP+    
Sbjct: 282 ADLDSAVEFAHQGVF-TNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGNPLTPGV 340
Query: 347 DLSRIVNPFHFARLASLLDEDKVSDKIVY--GGQRDEKQLKIAPTILLDVPDDSTIMKEE 404
           +    +N     ++  L++  K     +   GG    K   I PT+  +V DD  I KEE
Sbjct: 341 NHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEE 400
Query: 405 IFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVH 464
           IFGP+  I+  + +++      +    L A  F+ D          + AG +  N  +  
Sbjct: 401 IFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLAA 460
Query: 465 TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 501
           +  S  P GG   SG G   G++    ++  K V  +
Sbjct: 461 SAQS--PAGGFKMSGHGREMGEYGIHEYTEVKTVTMK 495

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 143/332 (43%), Gaps = 20/332 (6%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSA 227
           P+GV + IS WN+   + +              LKP+   P  ++   ++LED  +    
Sbjct: 172 PMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGV 231
Query: 228 VRVVEGAVAETSALL--EQKWDKILYTGSPRVG-RIVMAAAA-----KHLTPVILELGGK 279
           +  V G+ AE    L    K   I +TGS  VG R+   AA       HL  VI+E+GGK
Sbjct: 232 INYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGK 291
Query: 280 SPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
              VVD   +L +    I+   +   +GQ C      +  KD   ++++      K    
Sbjct: 292 DTVVVDRDADLDLAAESILVSAF-GFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350
Query: 340 KNPMESKD-LSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTILLDVPDD 397
            +P    + +  +++   F ++ S ++  K   +++ GG+ D      I PTI+ D+  +
Sbjct: 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPE 410
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD----EQMKKEFVQNISA 453
           + IM+EEIFGP++        + + ++  +    L     + +    EQ K+EF      
Sbjct: 411 AVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREF----HV 466
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG 485
           G + FN       V   PFGG   SG  S  G
Sbjct: 467 GNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498

>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 152/353 (43%), Gaps = 23/353 (6%)
Query: 163 AEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY 222
           A ++ +P+GV  VI+ WN+P  +                +KP+E  P ++  LA+L    
Sbjct: 140 ALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQA 199
Query: 223 VDNSAVRVV----------EGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPV 272
              S V  V           G    T  L+     KI +TGS   G+I++  AA  +  V
Sbjct: 200 GIPSGVYNVIPCSRKNAKEVGEAICTDPLV----SKISFTGSTTTGKILLHHAANSVKRV 255
Query: 273 ILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332
            +ELGG +P +V  + N+       +A K+  N GQ  +  +  +  +      + +   
Sbjct: 256 SMELGGLAPFIVFDSANVDQAVAGAMASKFR-NTGQTAVCSNQFLVQRGIHDAFVKAFAE 314
Query: 333 ELKEFF--GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDEKQLKI-A 387
            +K+    G    E      ++N     ++   ++ D VS    +V GG+R +       
Sbjct: 315 AMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVN-DAVSKGATVVTGGKRHQLGKNFFE 373
Query: 388 PTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEF 447
           PT+L +V  D     EE FGPL P++  +  E++  +  +    LA YF+S D       
Sbjct: 374 PTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRV 433
Query: 448 VQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
            + +  G +  N+ ++ +     PFGGV +SG+G    K+  D +   K V Y
Sbjct: 434 AEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEYLELKYVCY 484

>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 184/419 (43%), Gaps = 11/419 (2%)
Query: 87  SYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKSSCKLALKE-LKY 145
           SY  R + +  +A++             K+++K  +++ +SE+  T      A +E L+ 
Sbjct: 60  SYIERAAYLHKVADILMRDKEKIGAILSKEVAKG-YKSAVSEVVRTAEIINYAAEEGLRM 118
Query: 146 WTKP-EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKP 204
             +  E       +    A +  EP+G+VL IS +NYP  L+                KP
Sbjct: 119 EGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKP 178
Query: 205 SEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIV 261
                 +  LLA+   E  +       + G  +E    +   Q  + I +TGS  +G  +
Sbjct: 179 PTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 238
Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
              A   + P++LELGGK  A+V    +L++T + IIAG +   +GQ    V  ++  + 
Sbjct: 239 GKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRSTAVKRVLVMES 295
Query: 322 FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE 381
            A +L++ +R ++      NP +  D++ +++      +  L+++            + E
Sbjct: 296 VADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE 441
             L I P +   V  D  +  EE FGP+LPI+ V  +E++ ++       L A  F++D 
Sbjct: 356 GNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDF 414
Query: 442 QMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
                  + +  G +  N+     T  + PF G  +SG G    K+S +A +  K+V++
Sbjct: 415 PRAFGIAEQLEVGTVHINNKTQRGT-DNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score =  102 bits (255), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 162/348 (46%), Gaps = 26/348 (7%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSA 227
           P G V +I+ WN P +LS               LKP+E +P T++ LA++L++  +    
Sbjct: 162 PAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGV 221
Query: 228 VRVVEGAVAET-SALLEQKWDKIL-YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
             +V+G   E  +AL+      +L  TG    G+IVM  AA HL  +  ELGGKSPA+V 
Sbjct: 222 FNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVF 281
Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITT----KDFAPKLIDSLRNELKEFFGKN 341
           +  +L+     ++  +  + NG+ C     ++      +DF  K+++  R         +
Sbjct: 282 ADADLERALDAVVF-QIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARA----IRVGH 336
Query: 342 PMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQLK---------IAPTI 390
           P++ + ++  +++P H  R+   ++  K    +++ GG+R +   +         + PT+
Sbjct: 337 PLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTV 396
Query: 391 LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQN 450
            +   +   I +EEIFGP+L  +  +  E++          LAAY F+ D +        
Sbjct: 397 FVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALE 455
Query: 451 ISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
           + AG +  N   V    +  PFGGV  SG     G ++ D ++  K +
Sbjct: 456 LEAGMVYLNSHNVRHLPT--PFGGVKGSGDRREGGTYALDFYTDLKTI 501

>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538

Iteration: 1
 Score =  101 bits (252), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 137/328 (41%), Gaps = 12/328 (3%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSA 227
           P GV +VI  WN+ F +                LKP+  AP  ++   ++LE+  +    
Sbjct: 172 PTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESGLPKGV 231
Query: 228 VRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAK------HLTPVILELGGK 279
           V  V G+ AE    L    K   I +TGS  VG  +   AAK      HL  VI E+GGK
Sbjct: 232 VNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGK 291
Query: 280 SPAVVDSTINLQVTTRRIIAGKWMANNGQAC-IGVDYIITTKDFAPKLIDSLRNELKEFF 338
              VVD   ++++  + I    +    GQ C  G   ++  K +   L   +     +  
Sbjct: 292 DTVVVDEDCDIELAAQSIFTSAF-GFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKV 350
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE-KQLKIAPTILLDVPDD 397
           G+       +  +++   F ++   ++  K   ++V GG+ D+ K   I PTI  D+   
Sbjct: 351 GEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGRLVSGGKGDDSKGYFIEPTIFADLDPK 410
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
           + +M+EEIFGP++    V   +++ +V  +    L     + +        Q    G + 
Sbjct: 411 ARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEFHVGNLY 470
Query: 458 FNDTIVHTTVSSLPFGGVGESGMGSYHG 485
           FN       V   PFGG   SG  S  G
Sbjct: 471 FNRNCTGAIVGYHPFGGFKMSGTDSKAG 498

>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 22/347 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYVDNS 226
           EP+GV  ++  WNYP ++                +KP+++ P T+   A+L L+  +   
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAV 283
            V ++ G+ +     L    D  KI +TGS  VG+ +M + A  ++  V LELGGKSP +
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
           + +  +L    +  ++  +  N G+ CI    +   +    + +  +  E+++    NP+
Sbjct: 297 IFADCDLNKAVQMGMSSVFF-NKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 344 ESKDLSRIVNPFHFARLASLLDEDKVSDK----IVYGG-QRDEKQLKIAPTILLDVPDDS 398
           E        N  H A L  L++  +   K    +V GG Q         PT+  DV D  
Sbjct: 356 ERDTNHGPQN--HEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413
Query: 399 TIMKEEIFGPLLPIVTVEKIEDS-FDVIKSKPKP----LAAYFFSDDEQMKKEFVQNISA 453
            I KEE FG   PI+ + +  D   D + S+       LA+  F+ D   K  +V +   
Sbjct: 414 YIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN-KALYVSDKLQ 469
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
            G VF +T   T V++ PFGG  +SG G   G+ + + +   K V +
Sbjct: 470 AGTVFINTYNKTDVAA-PFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515

>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 158/347 (45%), Gaps = 22/347 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYVDNS 226
           EP+GV  ++  WNYP ++                +KP+++ P T+   A+L L+  +   
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAV 283
            V ++ G+ +     L    D  KI +TGS  VG+ +M + A  ++  V L+LGGKSP +
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLI 296
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
           + +  +L    +  ++  +  N G+ CI    +   +    + +  +  E+++    NP+
Sbjct: 297 IFADCDLNKAVQMGMSSVFF-NKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 344 ESKDLSRIVNPFHFARLASLLDEDKVSDK----IVYGG-QRDEKQLKIAPTILLDVPDDS 398
           E        N  H A L  L++  +   K    +V GG Q         PT+  DV D  
Sbjct: 356 ERDTNHGPQN--HEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413
Query: 399 TIMKEEIFGPLLPIVTVEKIEDS-FDVIKSKPKP----LAAYFFSDDEQMKKEFVQNISA 453
            I KEE FG   PI+ + +  D   D + S+       LA+  F+ D   K  +V +   
Sbjct: 414 YIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN-KALYVSDKLQ 469
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
            G VF +T   T V++ PFGG  +SG G   G+ + + +   K V +
Sbjct: 470 AGTVFINTYNKTDVAA-PFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515

>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 146/345 (42%), Gaps = 14/345 (4%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSA 227
           PLG  +VI+ WN+P  +                 KP+E A    + + ++  E       
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 228 VRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTP-------VILELGG 278
           V  + G   E  A L +  +   I +TGS  VG  +  AA + L P         +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
           K+  +VD T +  +    ++   +    GQ C     +I T+     +++ +    +   
Sbjct: 292 KNAIIVDETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS 350
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTILLDVPDD 397
                E+ DL  +V+     ++ S ++  K   ++V GG+R E +   IAPT+  +VP  
Sbjct: 351 VGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPK 410
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
           + I +EEIFGP+L ++ V+   ++ +V    P  L    +S   +  +   +    G + 
Sbjct: 411 ARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY 470
Query: 458 FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF-DAFSHKKAVLYR 501
           FN  I    V   PFGG   SG  +  G   +   F   KAV  R
Sbjct: 471 FNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515

>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516

Iteration: 1
 Score = 98.6 bits (244), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 145/345 (42%), Gaps = 14/345 (4%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSA 227
           PLG  +VI+ WN+P  +                 KP+E A    + + ++  E       
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 228 VRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTP-------VILELGG 278
           V  + G   E  A L +  +   I +TGS  VG  +  AA + L P         +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
           K   +VD T +  +    ++   +    GQ C     +I T+     +++ +    +   
Sbjct: 292 KDAIIVDETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS 350
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTILLDVPDD 397
                E+ DL  +V+     ++ S ++  K   ++V GG+R E +   IAPT+  +VP  
Sbjct: 351 VGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPK 410
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
           + I +EEIFGP+L ++ V+   ++ +V    P  L    +S   +  +   +    G + 
Sbjct: 411 ARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY 470
Query: 458 FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF-DAFSHKKAVLYR 501
           FN  I    V   PFGG   SG  +  G   +   F   KAV  R
Sbjct: 471 FNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score = 98.6 bits (244), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 144/341 (42%), Gaps = 10/341 (2%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNS 226
           EP+GV   I  WN+P L+                +KP+E  P ++  +  L+ E      
Sbjct: 156 EPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPG 215
Query: 227 AVRVVEGAVAETSALLEQKW--DKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAV 283
            V ++ G      A +      DKI +TGS  VG+++  AA + +L  V LELGGKSP +
Sbjct: 216 VVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNI 275
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
           + +  +L     +   G +  N GQ C     I   +    + +       K     +P 
Sbjct: 276 IFADADLDYAVEQAHQGVFF-NQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPF 334
Query: 344 E-SKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTI 400
           + + +    ++   + ++  L+        K+  GG+    K   I PT+  +V DD  I
Sbjct: 335 DPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRI 394
Query: 401 MKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFND 460
            KEEIFGP+  I+  + +++  +   +    L A  F++D          + AG +  N 
Sbjct: 395 AKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWIN- 453
Query: 461 TIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 501
              +   +  PFGG   SG G   G+F    +S  K V  +
Sbjct: 454 -CYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVK 493

>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 155/347 (44%), Gaps = 22/347 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYVDNS 226
           EP+GV  ++  WNYP ++                +KP+++ P T+   A+L L+  +   
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAV 283
            V ++ G+ +     L    D  KI +TGS  VG+ +M + A  ++  V L LGGKSP +
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
           + +  +L    +  ++  +  N G+ CI    +   +    + +  +  E+++    NP+
Sbjct: 297 IFADCDLNKAVQMGMSSVFF-NKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 344 ESKDLSRIVNPFHFARLASLLDEDKVSDK-----IVYGGQRDEKQLKIAPTILLDVPDDS 398
           E        N  H A L  L++  +   K     +  G Q         PT+  DV D  
Sbjct: 356 ERDTNHGPQN--HEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413
Query: 399 TIMKEEIFGPLLPIVTVEKIEDS-FDVIKSKPKP----LAAYFFSDDEQMKKEFVQNISA 453
            I KEE FG   PI+ + +  D   D + S+       LA+  F+ D   K  +V +   
Sbjct: 414 YIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN-KALYVSDKLQ 469
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
            G VF +T   T V++ PFGG  +SG G   G+ + + +   K V +
Sbjct: 470 AGTVFINTYNKTDVAA-PFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 143/345 (41%), Gaps = 13/345 (3%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVD 224
           I  +PLGVV  I+ WNYP +++               LKPSEI P T+  LA+L +D   
Sbjct: 155 IRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFP 214
Query: 225 NSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282
              V ++ G        L    K   +  TGS   G  +++  A  +    +ELGGK+P 
Sbjct: 215 AGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPV 274
Query: 283 VV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
           +V  D+ I   V   R        N GQ C     I   K     L++ L   +      
Sbjct: 275 IVFDDADIEAVVEGVRTFG---YYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSG 331
Query: 341 NPM-ESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQ-RDEKQLKIAPTILLDVPD 396
            P  ES +L  + +  H  R+   ++E K +   K++ GG+ R       APT+L     
Sbjct: 332 APDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQ 391
Query: 397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGI 456
           D  I+++E+FGP++ +   +  E   +        LA+  ++ D          +  G  
Sbjct: 392 DDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCT 451
Query: 457 VFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 501
             N   +   VS +P GG   SG G     +  + ++  + V+ +
Sbjct: 452 WVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494

>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517

Iteration: 1
 Score = 96.3 bits (238), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 22/347 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYVDNS 226
           EP+GV  ++  WNYP ++                +KP+++ P T+   A+L L+  +   
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAV 283
            V ++ G+ +     L    D  KI +TGS  VG+ +M + A  ++  V LELGGKSP +
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
           + +  +L    +  ++  +  N G+  I    +   +    + +  +  E+++    NP+
Sbjct: 297 IFADCDLNKAVQMGMSSVFF-NKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 344 ESKDLSRIVNPFHFARLASLLDEDKVSDK----IVYGG-QRDEKQLKIAPTILLDVPDDS 398
           E        N  H A L  L++  +   K    +V GG Q         PT+  DV D  
Sbjct: 356 ERDTNHGPQN--HEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413
Query: 399 TIMKEEIFGPLLPIVTVEKIEDS-FDVIKSKPKP----LAAYFFSDDEQMKKEFVQNISA 453
            I KEE FG   PI+ + +  D   D + S+       LA+  F+ D   K  +V +   
Sbjct: 414 YIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN-KALYVSDKLQ 469
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
            G VF +T   T V++ PFGG  +SG G   G+ + + +   K V +
Sbjct: 470 AGTVFINTYNKTDVAA-PFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515

>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 22/347 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYVDNS 226
           EP+GV  ++  WNYP ++                +KP+++ P T+   A+L L+  +   
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAV 283
            V ++ G+ +     L    D  KI +TGS  VG+ +M + A  ++  V LELGGKSP +
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
           + +  +L    +  ++  +  N G+  I    +   +    + +  +  E+++    NP+
Sbjct: 297 IFADCDLNKAVQMGMSSVFF-NKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 344 ESKDLSRIVNPFHFARLASLLDEDKVSDK----IVYGG-QRDEKQLKIAPTILLDVPDDS 398
           E        N  H A L  L++  +   K    +V GG Q         PT+  DV D  
Sbjct: 356 ERDTNHGPQN--HEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413
Query: 399 TIMKEEIFGPLLPIVTVEKIEDS-FDVIKSKPKP----LAAYFFSDDEQMKKEFVQNISA 453
            I KEE FG   PI+ + +  D   D + S+       LA+  F+ D   K  +V +   
Sbjct: 414 YIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN-KALYVSDKLQ 469
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
            G VF +T   T V++ PFGG  +SG G   G+ + + +   K V +
Sbjct: 470 AGTVFINTYNKTDVAA-PFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515

>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516

Iteration: 1
 Score = 95.9 bits (237), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 144/345 (41%), Gaps = 14/345 (4%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLL-EDYVDNSA 227
           PLG  +VI+ WN+P  +                 KP+E A    + + ++  E       
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 228 VRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTP-------VILELGG 278
           V  + G   E  A L +  +   I +TGS  VG  +  AA + L P         +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
           K   +VD T +  +    ++   +     +       I+T   + P L   L+   +   
Sbjct: 292 KDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKRAERLSV 351
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTILLDVPDD 397
           G    E+ DL  +V+     ++ S ++  K   ++V GG+R E +   IAPT+  +VP  
Sbjct: 352 GPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPK 410
Query: 398 STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIV 457
           + I +EEIFGP+L ++ V+   ++ +V    P  L    +S   +  +   +    G + 
Sbjct: 411 ARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY 470
Query: 458 FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF-DAFSHKKAVLYR 501
           FN  I    V   PFGG   SG  +  G   +   F   KAV  R
Sbjct: 471 FNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515

>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505

Iteration: 1
 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 155/339 (45%), Gaps = 16/339 (4%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLA--KLLEDYVDN 225
           EPLGVVL IS +NYP  L+                KP     AT   L+  K++E   D 
Sbjct: 151 EPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKP-----ATQGSLSGIKMVEALADA 205
Query: 226 SA----VRVVEG-AVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKS 280
            A    ++VV G        L+E     ++           ++  AK + PV+LELGGK 
Sbjct: 206 GAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK-MIPVVLELGGKD 264
Query: 281 PAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
           PA+V    +L++T  +I++G + + +GQ C  +  +      A +L+ +++  +++    
Sbjct: 265 PAIVLDDADLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323
Query: 341 NPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTI 400
           +P +  D++ +++    A +  L+D+   +   +  G + +  L ++PT+L DV     +
Sbjct: 324 SPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNL-LSPTLLDDVTPAMRV 382
Query: 401 MKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFND 460
             EE FGP+LPI+ V+   ++  +       L A  F+ D        +++  G +  N 
Sbjct: 383 AWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINA 442
Query: 461 TIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL 499
                     PF GV +SG+G    K S  + + ++  +
Sbjct: 443 K-TERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTV 480

>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 156/347 (44%), Gaps = 22/347 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYVDNS 226
           EP+GV  ++  WNYP ++                +KP+++ P T+   A+L L+  +   
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAV 283
            V ++ G+ +     L    D  KI +TGS  VG+ +M + A  ++  V L LGGKSP +
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
           + +  +L    +  ++  +  N G+  I    +   +    + +  +  E+++    NP+
Sbjct: 297 IFADCDLNKAVQMGMSSVFF-NKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 344 ESKDLSRIVNPFHFARLASLLDEDKVSDK----IVYGG-QRDEKQLKIAPTILLDVPDDS 398
           E        N  H A L  L++  +   K    +V GG Q         PT+  DV D  
Sbjct: 356 ERDTNHGPQN--HEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413
Query: 399 TIMKEEIFGPLLPIVTVEKIEDS-FDVIKSKPKP----LAAYFFSDDEQMKKEFVQNISA 453
            I KEE FG   PI+ + +  D   D + S+       LA+  F+ D   K  +V +   
Sbjct: 414 YIAKEESFG---PIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN-KALYVSDKLQ 469
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
            G VF +T   T V++ PFGG  +SG G   G+ + + +   K V +
Sbjct: 470 AGTVFINTYNKTDVAA-PFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515

>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 156/395 (39%), Gaps = 19/395 (4%)
Query: 129 ISMTKSSCKLALKELKYWTK--PEKAK-TSLTTYPSSAEIISEPLGVVLVISTWNYPFLL 185
           +S +K   +L +    Y+    PE  K T L +   +A  + +  GV+     WN+P   
Sbjct: 80  LSESKEEVELCVSICNYYADHGPEXLKPTKLNSDLGNAYYLKQSTGVIXACEPWNFPLYQ 139
Query: 186 SLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLE--DYVDNSAVRVVEGAVAETSALLE 243
            +              LK +   P +++L AK+++     + S + +          + +
Sbjct: 140 VIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIAD 199
Query: 244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
            +   +  TGS R G  V  AA K+L     ELGG    +V    + QV  R ++     
Sbjct: 200 PRIQGVALTGSERGGSAVAEAAGKNLKKSTXELGGNDAFIVLDDADPQVL-RNVLNDART 258
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
            N+GQ C     II  K    +++  L+N        +P+E+      + P +  +    
Sbjct: 259 YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEA---DTTLPPXNSEKAKEK 315
Query: 364 LDEDKVSDKIVYGG-------QRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVE 416
           L E +V + I  G        + D K     PTIL D+  D+ +  +E+FGP+  +  VE
Sbjct: 316 L-EAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVE 374
Query: 417 KIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVG 476
               +  +       L +     D    K+    I  G  V N   +  T   LPFGG+ 
Sbjct: 375 DDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTVINGRWI--TSGELPFGGIK 432
Query: 477 ESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRY 511
           +SG G         AF ++  V+  + N  +   Y
Sbjct: 433 KSGYGRELSGLGLXAFVNEHLVIDVTKNNQAENLY 467

>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501

Iteration: 1
 Score = 92.0 bits (227), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 162/358 (45%), Gaps = 27/358 (7%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY---VD 224
           EPLGVV  I+ +NYP   +++             +KPS   P  +++  K L D     D
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 225 NSAVRVVEGAVAETSALLEQKWDKILYTGSPRVG-RIVMAAAAKHLTPVILELGGKSPAV 283
             A+  + G  AE   + + +   + +TGS  VG R+V     K     ++ELGG  PA+
Sbjct: 216 AIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---VMELGGGDPAI 271
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
           V    +L +   +I  G + +  GQ C  +  ++  +    KL++ +   L      +P 
Sbjct: 272 VLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 344 E-SKDLSRIVNPFHFAR-LASLLDEDKVSDKIVYGGQRDEKQLKIAPT----ILLDVPDD 397
           + + D+  +++P      +A++ D  +   +++ GG+R      + PT     L++ P D
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR------LGPTYVQPTLVEAPAD 384
Query: 398 S----TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA 453
                 + K E+F P+   V V+ ++ + ++   +P  L A  F  D    +  V+ +  
Sbjct: 385 RVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEV 444
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRY 511
           G I  ND   H  +   PFGG  +SG+      ++ +A +  K +++ ++ G    +Y
Sbjct: 445 GAIYINDMPRH-GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF-NYKGKGVWKY 500

>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497

Iteration: 1
 Score = 91.7 bits (226), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 143/345 (41%), Gaps = 20/345 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSA 227
           + +GVV +I+ WN+P                   LKPSEIAP ++ L A++L++    S 
Sbjct: 160 DAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSG 219
Query: 228 V-RVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284
           V  ++ G  A   + L    D   I +TGS R G+ +   A+  L  V LELGGK   ++
Sbjct: 220 VFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANII 279
Query: 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN-ELKEFFGKNPM 343
            +  ++    R +       N+GQ+C     ++  +    K I + ++   K   G    
Sbjct: 280 FADADIDALQRGVR--HCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQ 337
Query: 344 ESKDLSRIVNPFHFARLASLL----DEDKVSDKIVYGG----QRDEKQLKIAPTILLDVP 395
               +  +V+   + ++  L+    DE      +V GG       E+   + PT+  DV 
Sbjct: 338 TGNHIGPVVSKEQYDKIQDLIQSGIDEGAT---LVTGGTGLPMGMERGYYVRPTVFADVK 394
Query: 396 DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGG 455
               I +EEIFGP+L ++     +++  +       L  Y  S D    +     + +G 
Sbjct: 395 PHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGM 454
Query: 456 IVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLY 500
           +  N    H       FGGV  SG     G +    F   KA+ Y
Sbjct: 455 VEVNG---HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAISY 496

>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462

Iteration: 1
 Score = 91.7 bits (226), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 139/339 (41%), Gaps = 16/339 (4%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAV 228
           PLGV+L I  WN+P    L              LK +      +  +A++L +    + V
Sbjct: 126 PLGVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGV 185
Query: 229 RVVEGAVAE--TSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286
                A  E  +  + + +   +  TGS R G  + A A   L   +LELGG  P +V +
Sbjct: 186 YGWVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLN 245
Query: 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ES 345
             +L++  +  +AG++  N GQ C      I  +  A    D            +P+ E 
Sbjct: 246 DADLELAVKAAVAGRYQ-NTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEE 304
Query: 346 KDLS-----RIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKI-APTILLDVPDDST 399
            DL       + +  H    AS+ +      +++ GG++   +    A T+L DV  D T
Sbjct: 305 NDLGPXARFDLRDELHQQVQASVAE----GARLLLGGEKIAGEGNYYAATVLADVTPDXT 360
Query: 400 IMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFN 459
             ++E+FGP+  I   +    +  +       L+A  F+ D+ +  E    +  GG+  N
Sbjct: 361 AFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFIN 420
Query: 460 DTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
                 + + + FGGV +SG G     F    F + + V
Sbjct: 421 G--YSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTV 457

>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 161/353 (45%), Gaps = 17/353 (4%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYV---D 224
           EPLGVV  I+ +NYP   +++             +KPS   P  +++  K L D     D
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 225 NSAVRVVEGAVAETSALLEQKWDKILYTGSPRVG-RIVMAAAAKHLTPVILELGGKSPAV 283
             A+  + G  AE   + + +   + +TGS  VG R+V     K     ++ELGG  PA+
Sbjct: 216 AIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---VMELGGGDPAI 271
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
           V    +L +   +I  G + +  GQ C  +  ++  +    KL++ +   L      +P 
Sbjct: 272 VLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 344 E-SKDLSRIVNPFHFAR-LASLLDEDKVSDKIVYGGQRDEKQLKIAPTIL---LDVPDDS 398
           + + D+  +++P      +A++ D  +   +++ GG+R      + PT++    D   D 
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTY-VQPTLVEAPADRVKDM 389
Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVF 458
            + K E+F P+   V V+ ++ + ++   +P  L A  F  D    +  V+ +  G I  
Sbjct: 390 VLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYI 449
Query: 459 NDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRY 511
           ND   H  +   PFGG  +SG+      ++ +A +  K +++ ++ G    +Y
Sbjct: 450 NDMPRH-GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF-NYKGKGVWKY 500

>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 153/333 (45%), Gaps = 16/333 (4%)
Query: 171 GVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLL-AKLLEDY-VDNSAV 228
           GVV VIS WN+P  LS+              +KP+   P T  ++ A++ E+  V    +
Sbjct: 150 GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVI 209
Query: 229 RVVEGAVAETS-ALLEQKWDKIL-YTGSPRVGRIV--MAAAAKHLTPVILELGGKSPAVV 284
             V GA +E     +     K++ +TGS  VGR V  +A     +  V LELGG +P VV
Sbjct: 210 STVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVV 269
Query: 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK----DFAPKLIDSLRNELKEFFGK 340
            +  ++    +    G ++ + GQ C+ ++ +I       +F  K +++++N      G 
Sbjct: 270 LADADIDAAAQAAAVGAFL-HQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT---GD 325
Query: 341 NPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTI 400
              E   +  ++N    + L   ++  K     V      E +L + P +  DV  D  I
Sbjct: 326 PSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRL-VHPHVFSDVTSDMEI 384
Query: 401 MKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFND 460
            +EEIFGPL+ ++  +    + ++  +    L+A  +S D     +F   I +G +  ND
Sbjct: 385 AREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHIND 444
Query: 461 TIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS 493
             V+     + FGG   SG+G ++G ++ + F+
Sbjct: 445 LTVNDEPHVM-FGGSKNSGLGRFNGDWAIEEFT 476

>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 160/353 (45%), Gaps = 17/353 (4%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYV---D 224
           EPLGVV  I+ +NYP   +++             +KPS   P  +++  K L D     D
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 225 NSAVRVVEGAVAETSALLEQKWDKILYTGSPRVG-RIVMAAAAKHLTPVILELGGKSPAV 283
             A+  + G  AE   + + +   + +TGS  VG R+V     K     ++ELGG  PA+
Sbjct: 216 AIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---VMELGGGDPAI 271
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
           V    +L +   +I  G + +  GQ C  +  ++  +    KL++ +   L      +P 
Sbjct: 272 VLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 344 E-SKDLSRIVNPFHFAR-LASLLDEDKVSDKIVYGGQRDEKQLKIAPTIL---LDVPDDS 398
           + + D+  +++P      +A++ D  +   +++ GG+R      + PT +    D   D 
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTY-VQPTFVEAPADRVKDM 389
Query: 399 TIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVF 458
            + K E+F P+   V V+ ++ + ++   +P  L A  F  D    +  V+ +  G I  
Sbjct: 390 VLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYI 449
Query: 459 NDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRY 511
           ND   H  +   PFGG  +SG+      ++ +A +  K +++ ++ G    +Y
Sbjct: 450 NDMPRH-GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF-NYKGKGVWKY 500

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 156/352 (44%), Gaps = 19/352 (5%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSA 227
           P+GVV  I+ +N+P ++                LKPSE  P  +  L +L E   +    
Sbjct: 141 PIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGV 200
Query: 228 VRVVEGAVAETSALLEQKWDK-ILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286
             VV GA    + +LE    K I + GS  VG  V    +++L  V    G K+  +V +
Sbjct: 201 FNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLN 260
Query: 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF-FGKNPMES 345
             NL+ T   I+ G    + G+ C+    +   +  A + +  L+ ++ +   G    + 
Sbjct: 261 DANLEDTVTNIV-GAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDG 319
Query: 346 KDLSRIVNPFHFARLASLLDED-KVSDKIVYGGQRD--EKQLKIAPTILLDVPDDSTIMK 402
             L  ++   +  R  S +++  +   ++V  G+ +  +    + PTI  +V  + TI K
Sbjct: 320 VFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWK 379
Query: 403 EEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTI 462
           +EIF P+L ++ V+ ++++ ++         A  F+ +    + F +NI AG +  N   
Sbjct: 380 DEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGIN-LG 438
Query: 463 VHTTVSSLPFGGVGESGMGSYH--GKFSFDAFSHKKAVLYRSFNGDSTTRYP 512
           V   ++  PF G   S  G+ H  GK S D ++ KK V         T RYP
Sbjct: 439 VPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVV---------TARYP 481

>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498

Iteration: 1
 Score = 88.6 bits (218), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 144/339 (42%), Gaps = 11/339 (3%)
Query: 162 SAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLED 221
           ++ I  +P+G+V  I+ WNYP                    KPSE  P T+  LA+L+ D
Sbjct: 154 TSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIAD 213
Query: 222 YVDNSAVRVVEGAVAET--SALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 278
            +    V V+ G   ET  +AL+   K   +  TG    G+ V+AAAAK +    LELGG
Sbjct: 214 ILPEGVVNVITGR-GETVGNALINHPKVGXVSITGDIATGKKVLAAAAKTVKRTHLELGG 272
Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF- 337
           K+P +V    +L+     I    +  N GQ C     I        KL+  L + +    
Sbjct: 273 KAPVIVYGDADLEAVVNGIRTFGYY-NAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIR 331
Query: 338 FGKNPMESKDLSRIVNPFHFARLASLLDE--DKVSDKIVYGGQR-DEKQLKIAPTILLDV 394
           +  +     ++  +++     R+AS ++   D+   +I  GG+   ++     PT++   
Sbjct: 332 YNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGA 391
Query: 395 PDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAG 454
             +  I++ E+FGP++ +      +D+          LA+  ++ D          +  G
Sbjct: 392 TQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAXRAASRLQYG 451
Query: 455 GIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS 493
               N     T  +  P GG+ +SG G     ++ + ++
Sbjct: 452 CTWINTHFXLT--NEXPHGGIKQSGYGKDXSVYALEDYT 488

>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 144/358 (40%), Gaps = 18/358 (5%)
Query: 136 CKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXX 195
           C   +  L   T PEK K    T      +   P+GV  +I  WN+P             
Sbjct: 120 CAKHISALDSHTIPEKPKDCTWT------VHYRPVGVTGLIVPWNFPIGXIAKKLSAALA 173
Query: 196 XXXXXXLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQKWD--KILYT 252
                 +KP+   P T      + +   + +  V +V G  +    +L +  D   + +T
Sbjct: 174 AGCPSVIKPASETPLTXIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFT 233
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
           GS  VGR ++   A+ +  + LELGG +P +V    +L+     +IA K+    GQ C+ 
Sbjct: 234 GSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRG-GGQTCVC 292
Query: 313 VDYIITTKDFAPKLIDSLRNEL-KEFFGKNPMESKDLSRIVNPFHFARLASLLDE--DKV 369
            + I   +  A      L   + K   G    +  D+  ++N   F ++   L +  DK 
Sbjct: 293 ANRIFVHEKVADAFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKG 352
Query: 370 SDKIVYGGQRDE--KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKS 427
           +  +V G Q  E    L   PT++  V  +    +EE FGPL+P       E+  D    
Sbjct: 353 A-SLVAGKQPAELGDGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGND 411
Query: 428 KPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG 485
               LA+Y F+ D +  +     +  G + +N     T     PFGG   SG+G   G
Sbjct: 412 TEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPT--PEAPFGGXKASGIGREGG 467

>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 151/334 (45%), Gaps = 10/334 (2%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPS-EIAPATSSLLAKLLEDY-VDNS 226
           PLGV+  IS +N+P  LS+               KP  + A +  +++AK  E   +   
Sbjct: 143 PLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAG 202
Query: 227 AVRVVEGAVAETS-ALLEQKWDKIL-YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284
            + V+   V E    +L     +++ +TGS  VGR +   A +    + LELGG +P  V
Sbjct: 203 VLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAV 262
Query: 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF-FGKNPM 343
            S  ++       I GK++ + GQ C+ ++ II  +D   + ++     +K+  +G    
Sbjct: 263 LSDADVDRAVDAAIFGKFI-HQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTD 321
Query: 344 ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQLKIAPTILLDVPDDSTIMK 402
               +  ++N     +   ++++ K    ++   G+R    L   P + +   ++S I +
Sbjct: 322 PKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGNVL--TPYVFVGADNNSKIAQ 379
Query: 403 EEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTI 462
            E+F P+  I+     +++ D+       L++  F+ D +  ++F   I +G    ND  
Sbjct: 380 TELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQS 439
Query: 463 VHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKK 496
           V+ +  ++ FGG   SG+G +   +  + F+  K
Sbjct: 440 VNDS-PNIAFGGNKASGVGRFGNPWVVEEFTVTK 472

>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 14/324 (4%)
Query: 171 GVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATS-SLLAKLLEDYVDNSAVR 229
           GV + IS WN+P  + L               KP+E  P  +   +A L E  +  SA+ 
Sbjct: 651 GVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALY 710
Query: 230 VVEGAVAETSALLEQKWD--KILYTGSPRVGRIV---MAAAAKHLTPVILELGGKSPAVV 284
           +V G      A L    D   +++TGS  V R +   +AA    + P+I E GG +  + 
Sbjct: 711 LVTGD-GRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIA 769
Query: 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME 344
           D+T   +     ++   +  + GQ C  +  +   +D A ++I+ +    +E    +P +
Sbjct: 770 DATALPEQVADDVVTSAFR-SAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSD 828
Query: 345 -SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKE 403
            +  +  +++     RL + +   K   ++ + G   E    +AP I      ++  + E
Sbjct: 829 VATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCF-VAPHIFELT--EAGQLTE 885
Query: 404 EIFGPLLPIVTV--EKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDT 461
           E+FGP+L +V    E +E     I+     L     S  +   +  +  +  G I  N  
Sbjct: 886 EVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRN 945
Query: 462 IVHTTVSSLPFGGVGESGMGSYHG 485
           ++   V   PFGG G SG G   G
Sbjct: 946 MIGAVVGVQPFGGNGLSGTGPKAG 969

>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 136/348 (39%), Gaps = 14/348 (4%)
Query: 166 ISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKL-LEDYVD 224
           I +P+G+   I+ +N+P  +                LKPSE  P+    LA+L +E  + 
Sbjct: 159 IRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRLAELXIEAGLP 218
Query: 225 NSAVRVVEGAVAETSALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283
              + VV G      A+L       + + GS  + R V   AA +        G K+  +
Sbjct: 219 AGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQCFGGAKNHXI 278
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYII-TTKDFAPKLIDSLRNELKEF-FGKN 341
           +    +L      +I G    + G+ C  +   +   ++ A +LID L   ++    G  
Sbjct: 279 IXPDADLDQAANALI-GAGYGSAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIGPY 337
Query: 342 PMESKDLSRIVNPFHFARLASLLDED-KVSDKIVYGG-----QRDEKQLKIAPTILLDVP 395
             E  D   +V      R+ SL+D   +   K+V  G     Q  E    I   +  DV 
Sbjct: 338 TDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVT 397
Query: 396 DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGG 455
            D  I K EIFGP+L +V     E++  +            ++ D    ++F   I+ G 
Sbjct: 398 PDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDFASRINIGX 457
Query: 456 IVFNDTIVHTTVSSLPFGGVGESGMG--SYHGKFSFDAFSHKKAVLYR 501
           +  N   +   ++   FGG   S  G  + HG  S   ++  K +  R
Sbjct: 458 VGVN-VPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504

>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 132/332 (39%), Gaps = 21/332 (6%)
Query: 161 SSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSL-LAKLL 219
           ++A +  +P GVV V   +N+P  L                 KPSE+ P  + L L   +
Sbjct: 131 ATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWI 190
Query: 220 EDYVDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVI-LELG 277
           +  +    + +V+G      AL   +  D + +TGS R G ++ +        ++ LE G
Sbjct: 191 QAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEXG 250
Query: 278 GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
           G +P VV+   +L      II   ++ + GQ C     ++  +       D+L   L   
Sbjct: 251 GNNPLVVEEVADLDAAVYTIIQSAFI-SAGQRCTCARRLLVPQG---AWGDALLARLVAV 306
Query: 338 FGKNPMESKDLSRIVNPFHFARLASLLDED--KVSDKIVYGG--------QRDEKQLKIA 387
                +          PF  A ++    E   K  + ++  G        Q  +    + 
Sbjct: 307 --SATLRVGRFDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPIDGAALLT 364
Query: 388 PTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEF 447
           P I LDV   +    EE FGPLL ++       +     +    LAA   SD  +  ++F
Sbjct: 365 PGI-LDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQF 423
Query: 448 VQNISAGGIVFNDTIVHTTVSSLPFGGVGESG 479
           +    AG + +N  +     SS PFGG+G SG
Sbjct: 424 LVESRAGIVNWNKQLT-GAASSAPFGGIGASG 454

>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 20/286 (6%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLK----PSEIAPATSSLLAKLLEDYVD 224
           P+G+V +I+ +N+P  +                 K     S I+ A + ++AK+LED   
Sbjct: 157 PVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKL 216
Query: 225 NSAV--RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282
             A+      GA   T+   +++ + + +TGS +VG+ V     +     +LELGG +  
Sbjct: 217 PGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAI 276
Query: 283 VV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
           +   D+ ++L V +    A   +   GQ C     +   +    ++++ L+    +    
Sbjct: 277 IAFEDADLSLVVPSALFAA---VGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVG 333
Query: 341 NPMESKDLSRIVNPFHFARLASLL-----DEDKVSDKIVYGGQ-RDEKQLKIAPTILLDV 394
           NP    D + +  P H  +  S+      +  K    +VYGG+  D     + PTI+  +
Sbjct: 334 NPW---DPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGL 390
Query: 395 PDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD 440
             D++I   E F P+L +   +  E+ F       + L++  F+ D
Sbjct: 391 GHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKD 436

>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/342 (20%), Positives = 143/342 (41%), Gaps = 21/342 (6%)
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAV 228
           P+G+V +I+ +N+P  +                 K +   P TS  + K++ + ++ + +
Sbjct: 155 PVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNL 214
Query: 229 ------RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282
                     GA   T+   +++ D + +TGS  VG++V     +     +LELGG +  
Sbjct: 215 PGAICSMTCGGADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGNNAI 274
Query: 283 VV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
           +V  D+ +NL V +    +   +   GQ C     ++  +     +++ +    K+    
Sbjct: 275 IVFEDADLNLVVPSAVFAS---VGTAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIG 331
Query: 341 NPMESKDLSRIVNPFHFAR-----LASLLDEDKVSDKIVYGGQ-RDEKQLKIAPTILLDV 394
           +P    D S +  P H  +     LA++    +    +V GG+  D     + PTI+  +
Sbjct: 332 DPW---DPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTIITGL 388
Query: 395 PDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD-EQMKKEFVQNISA 453
             D+ I+  E F P+L ++  +  E++F       + L++  F+ D  ++ +      S 
Sbjct: 389 AHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGSD 448
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHK 495
            GIV  +           FGG   +G G   G  S+  +  +
Sbjct: 449 CGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQYMRR 490

>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 127/332 (38%), Gaps = 18/332 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSA 227
           EP GV  VI+ WN+P  +S+               KPS I   TS +   L+E + +   
Sbjct: 665 EPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGI---TSIIGWHLVELFREAGL 721
Query: 228 VRVV------EGAVAETSALLEQKWDKILYTGSPRVG-RIVMAAAAKH-----LTPVILE 275
              V       G+V     +       I +TGS   G RI+  AA  H     +  +I E
Sbjct: 722 PEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISE 781
Query: 276 LGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335
           +GGK+  ++D   +L      ++   +    GQ C     +I       K I+ L +  K
Sbjct: 782 MGGKNAIIIDDDADLDEAVPHVLYSAF-GFQGQKCSACSRVIVLDAVYDKFIERLVSMAK 840
Query: 336 EF-FGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAP-TILLD 393
               G +   +  +  + +      +    +  K    ++Y       +    P TI+  
Sbjct: 841 ATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGG 900
Query: 394 VPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA 453
           +  +  I +EEIFGP+L ++  +  + + +   S    L    FS   +   +  +    
Sbjct: 901 IKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRV 960
Query: 454 GGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG 485
           G +  N       V   PFGG   SG+G+  G
Sbjct: 961 GNLYINRNNTGALVERQPFGGARMSGVGTKAG 992

>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 11/215 (5%)
Query: 275 ELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334
           E GGK+   V S+ ++       +   +    GQ C     +   K   P++   L  E 
Sbjct: 314 ECGGKNFHFVHSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQIKGRLLEEH 372
Query: 335 KEFFGKNPMESKD--LSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDEK-QLKIAPT 389
                 +P E      S +++   FAR+   L+  + S    I+ GGQ +E     + P 
Sbjct: 373 SRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPC 432
Query: 390 ILLDVPDDSTIMKEEIFGPLLPIVTV--EKIEDSFDVIKSKPK-PLAAYFFSDDEQMKKE 446
           I+        IMKEEIFGP+L +     +K  ++  ++ S     L    F+ D+ + +E
Sbjct: 433 IIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQE 492
Query: 447 FVQNI--SAGGIVFNDTIVHTTVSSLPFGGVGESG 479
             + +  +AG    ND    + V   PFGG   SG
Sbjct: 493 ATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASG 527

>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 11/215 (5%)
Query: 275 ELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334
           E GGK+   V  + +++      +   +    GQ C     +       P++   L  E 
Sbjct: 317 ECGGKNFHFVHRSADVESVVSGTLRSAF-EYGGQKCSACSRLYVPHSLWPQIKGRLLEEH 375
Query: 335 KEFFGKNPME--SKDLSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDEK-QLKIAPT 389
                 +P E      S +++   FAR+   L+  + S    I+ GG+ D+     + P 
Sbjct: 376 SRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPC 435
Query: 390 ILLDVPDDSTIMKEEIFGPLLPIVTV--EKIEDSFDVIKSKPK-PLAAYFFSDDEQMKKE 446
           I+        IMKEEIFGP+L +     +K +++  ++ S     L    FS D+ + +E
Sbjct: 436 IVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQE 495
Query: 447 FVQNI--SAGGIVFNDTIVHTTVSSLPFGGVGESG 479
             + +  +AG    ND    + V   PFGG   SG
Sbjct: 496 ATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASG 530

>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 11/215 (5%)
Query: 275 ELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334
           E GGK+   V  + +++      +   +    GQ C     +       P++   L  E 
Sbjct: 317 ECGGKNFHFVHRSADVESVVSGTLRSAF-EYGGQKCSACARLYVPHSLWPQIKGRLLEEH 375
Query: 335 KEFFGKNPMESKD--LSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDEK-QLKIAPT 389
                 +P E      S +++   FAR+   L+  + S    I+ GG+ D+     + P 
Sbjct: 376 SRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPC 435
Query: 390 ILLDVPDDSTIMKEEIFGPLLPIVTV--EKIEDSFDVIKSKPK-PLAAYFFSDDEQMKKE 446
           I+        IMKEEIFGP+L +     +K +++  ++ S     L    FS D+ + +E
Sbjct: 436 IVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQE 495
Query: 447 FVQNI--SAGGIVFNDTIVHTTVSSLPFGGVGESG 479
             + +  +AG    ND    + V   PFGG   SG
Sbjct: 496 ATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASG 530

>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 11/215 (5%)
Query: 275 ELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334
           E GGK+   V  + +++      +   +    GQ C     +       P++   L  E 
Sbjct: 317 ECGGKNFHFVHRSADVESVVSGTLRSAF-EYGGQKCSACLRLYVPHSLWPQIKGRLLEEH 375
Query: 335 KEFFGKNPMESKD--LSRIVNPFHFARLASLLDEDKVSDK--IVYGGQRDEK-QLKIAPT 389
                 +P E      S +++   FAR+   L+  + S    I+ GG+ D+     + P 
Sbjct: 376 SRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPC 435
Query: 390 ILLDVPDDSTIMKEEIFGPLLPIVTV--EKIEDSFDVIKSKPK-PLAAYFFSDDEQMKKE 446
           I+        IMKEEIFGP+L +     +K +++  ++ S     L    FS D+ + +E
Sbjct: 436 IVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQE 495
Query: 447 FVQNI--SAGGIVFNDTIVHTTVSSLPFGGVGESG 479
             + +  +AG    ND    + V   PFGG   SG
Sbjct: 496 ATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASG 530

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	543
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	0.0
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	0.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	2e-62
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	6e-61
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	6e-60
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	6e-60
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	7e-60
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	2e-59
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	3e-59
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	1e-58
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	8e-58
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	1e-56
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	1e-56
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	2e-56
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	1e-55
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	1e-55
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	1e-53
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	2e-53
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	2e-53
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	4e-53
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	9e-53
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	2e-52
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	3e-52
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	4e-52
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	1e-50
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	1e-49
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	1e-49
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	2e-49
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	1e-48
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	8e-48
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	3e-47
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	3e-47
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	7e-47
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	3e-46
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	4e-43
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	2e-41
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	4e-41
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	1e-38
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	2e-38
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	3e-38
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	4e-38
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	5e-38
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	9e-38
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	2e-32
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	2e-31
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	1e-28
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-11

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score =  727 bits (1880), Expect = 0.0
 Identities = 201/458 (43%), Positives = 292/458 (63%), Gaps = 7/458 (1%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
            + K +  +K  R  ++S +T+  ++R+ Q++++  +I+E+E+E++ A+  DL K  +  
Sbjct: 16  HMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNA 75

Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
           +  E+       +  +++L  W   E  + +  T      I SEPLGVVLVI TWNYPF 
Sbjct: 76  YYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFN 135

Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQ 244
           L++ P++GAIAAGNAVVLKPSE++   +SLLA ++  Y+D     V+ G V ET+ LL++
Sbjct: 136 LTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKE 195

Query: 245 KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMA 304
           ++D ILYTGS  VG+I+M AAAKHLTPV LELGGKSP  VD   +L V  RRI  GK+M 
Sbjct: 196 RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFM- 254

Query: 305 NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLL 364
           N+GQ C+  DYI+       ++++ L+  LKEF+G++  +S+D  RI++  HF R+  L+
Sbjct: 255 NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLI 314

Query: 365 DEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDV 424
           +      K+ YGG  D     IAPTIL DV   S +M+EEIFGP+LPIV V  +E++   
Sbjct: 315 E----GQKVAYGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQF 370

Query: 425 IKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYH 484
           I  + KPLA Y FS ++++ K+ +   S+GG+  ND IVH T+ SLPFGGVG SGMGSYH
Sbjct: 371 INQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYH 430

Query: 485 GKFSFDAFSHKKAVLYRSFNGDSTT--RYPPYTAEKQK 520
           GK SF+ FSH+++ L R    D     RYPP  A+  +
Sbjct: 431 GKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMTQ 468

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score =  631 bits (1630), Expect = 0.0
 Identities = 150/452 (33%), Positives = 233/452 (51%), Gaps = 8/452 (1%)

Query: 51  SATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEII 110
           S  +  ++K M      K  SL    +  + +R T    +R   ++ +   +   +E + 
Sbjct: 12  SGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALY 71

Query: 111 EAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPL 170
            A+ +DL KP     ++EI         AL  L  W  P    +     PS   ++ EP 
Sbjct: 72  SALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPY 131

Query: 171 GVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRV 230
           GV  +I  +NYP  L+L P+IGAI  GN  ++KPSE  P TS+++ K++ +      V V
Sbjct: 132 GVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAV 191

Query: 231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINL 290
           ++G   E S LL   +D I +TGSP VG++VM AAAKHLTPV+LELGGK P +V    +L
Sbjct: 192 IQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADL 251

Query: 291 QVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSR 350
             T  +++ GK++ N+GQ  I  DY+         L++ L   +K    +         +
Sbjct: 252 DQTVNQLMFGKFI-NSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEIN----STGK 306

Query: 351 IVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLL 410
           +V      RL SLL+  +   +++ G Q D  +  ++ T++  V  +  +M EE+FGP+L
Sbjct: 307 LVTERQVQRLVSLLEATQ--GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPIL 364

Query: 411 PIVTVEKIEDSFDVI-KSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSS 469
           P++  + +  + D + K  PKPLA Y F  D  + K  +  I +G    N  ++H     
Sbjct: 365 PVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPY 424

Query: 470 LPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR 501
           LPFGG+G SGMG YHG FS+  F+HKK+V   
Sbjct: 425 LPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score =  212 bits (542), Expect = 2e-62
 Identities = 104/421 (24%), Positives = 182/421 (43%), Gaps = 42/421 (9%)

Query: 99  ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTT 158
           A ++EE  EEI+E + K+      +  + EI++  +  K         +     +     
Sbjct: 82  AELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITK--------ESASFPGRVHGRI 132

Query: 159 YPSSAE-----IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS 213
            PS+       +     GVV VIS WN+P  LS+  V  A+A GNAVV+KP+   P T  
Sbjct: 133 SPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGG 192

Query: 214 LL-AKLLEDYVDNSA------VRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVM-- 262
           ++ A++ E+     A      +  V GA +E             I +TGS  VGR V   
Sbjct: 193 VIPARIFEE-----AGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGEL 247

Query: 263 AAAAKHLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320
           A     +  V LELGG +P VV  D+ I+          G ++ + GQ C+ ++ +I   
Sbjct: 248 AINGGPMKTVALELGGNAPFVVLADADIDAAAQA--AAVGAFL-HQGQICMSINRVIVDA 304

Query: 321 DFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGG 377
               + ++     +K     +P      +  ++N    + L   + E    +   +   G
Sbjct: 305 AVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKI-ELAKKEGATVQVEG 363

Query: 378 QRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFF 437
             +     + P +  DV  D  I +EEIFGPL+ ++  +    + ++  +    L+A  +
Sbjct: 364 PIE--GRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVW 421

Query: 438 SDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKA 497
           S D     +F   I +G +  ND  V+     + FGG   SG+G ++G ++ + F+  + 
Sbjct: 422 SKDIDRAAQFALQIDSGMVHINDLTVNDEP-HVMFGGSKNSGLGRFNGDWAIEEFTTDRW 480

Query: 498 V 498
           +
Sbjct: 481 I 481

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  209 bits (533), Expect = 6e-61
 Identities = 98/437 (22%), Positives = 172/437 (39%), Gaps = 38/437 (8%)

Query: 98  IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---W-TKPEKAK 153
            A +I  ++ E    +  +  KP  E   ++ +        A+  L+Y      +  + K
Sbjct: 105 AAAIIRRRKHEFSAWLVHEAGKPWKEA-DADTAE-------AIDFLEYYARQMIELNRGK 156

Query: 154 TSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS 213
             L+           P+GV + IS WN+   + +   +  I  GN VVLKP+   P  ++
Sbjct: 157 EILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAA 216

Query: 214 LLAKLLEDYVDNSA------VRVV--EGAVAETSALLE-QKWDKILYTGSPRVGRIVMAA 264
              ++LED     A      +  V   GA      L++  K   I +TGS  VG  +   
Sbjct: 217 KFVEVLED-----AGLPKGVINYVPGSGAEV-GDYLVDHPKTSLITFTGSKDVGVRLYER 270

Query: 265 AAK------HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIIT 318
           AA       HL  VI+E+GGK   VVD   +L +    I+       +GQ C      + 
Sbjct: 271 AAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSA-FGFSGQKCSAGSRAVI 329

Query: 319 TKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSDKIVYGG 377
            KD   ++++      K     +P      +  +++   F ++ S ++  K   +++ GG
Sbjct: 330 HKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGG 389

Query: 378 QRDEKQ-LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYF 436
           + D      I PTI+ D+  ++ IM+EEIFGP++        + + ++  +    L    
Sbjct: 390 EGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAV 449

Query: 437 FSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYH-GKFSFDAFSHK 495
            + +    ++  +    G + FN       V   PFGG   SG  S   G          
Sbjct: 450 ITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQA 509

Query: 496 KAVLYRSFNGDSTTRYP 512
           K V    +  +   +  
Sbjct: 510 KTV-SEMYAENLYFQSH 525

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score =  205 bits (523), Expect = 6e-60
 Identities = 112/431 (25%), Positives = 192/431 (44%), Gaps = 47/431 (10%)

Query: 91  RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
           R + +  I    E ++++I++AI  +L  P   +      M  +    A   L  +   E
Sbjct: 69  RQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE 128

Query: 151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPA 210
           +    L           E +GV  +I+ WN+P   +   +  A AAG+ VVLKPSE  P 
Sbjct: 129 RRGDDLVVK--------EAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPF 180

Query: 211 TSSLLAKLLEDY-----VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMA 263
            + +LA++ +       V N    +V G  A     L +  K   + +TGS   G  +M 
Sbjct: 181 AAVILAEIFDKVGVPKGVFN----LVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIME 236

Query: 264 AAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFA 323
            AAK    V LELGGKSP +V   ++++   +       + N GQ C        T+   
Sbjct: 237 KAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGK-VVNNTGQVCTA-----GTRVLV 290

Query: 324 PKLI-DSLRNELKEFFGK----NPM-ESKDLSRIVNPFHFARLASLLDEDKVSD--KIVY 375
           P  I D+   ELKE F +    NP  +   +  I++   F ++ + +    + +  ++ Y
Sbjct: 291 PNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYI-NKGIEEGAELFY 349

Query: 376 GGQRDEKQLK----IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SK 428
           GG    + L+      PTI ++V +  TI +EEIFGP++ ++T   ++   + I+     
Sbjct: 350 GGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLD---EAIQIANDT 406

Query: 429 PKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS 488
              LA Y    D++   +  ++I AG +  N+      +   PFGG  +SG+G   G + 
Sbjct: 407 KYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDL---PFGGYKQSGLGREWGDYG 463

Query: 489 FDAFSHKKAVL 499
            + F   K++ 
Sbjct: 464 IEEFLEVKSIA 474

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score =  204 bits (522), Expect = 6e-60
 Identities = 103/431 (23%), Positives = 190/431 (44%), Gaps = 32/431 (7%)

Query: 83  RKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142
           R     E R + +  +A+++   +E+I   + K+++K      +SE+  T      A +E
Sbjct: 57  RALSYIE-RAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEE 114

Query: 143 LK----------YWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG 192
                        +    K K ++           EP+G+VL IS +NYP  L+   +  
Sbjct: 115 GLRMEGEVLEGGSFEAASKKKIAVV--------RREPVGLVLAISPFNYPVNLAGSKIAP 166

Query: 193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQ--KWDKI 249
           A+ AGN +  KP      +  LLA+   +  +       + G  +E    + +    + I
Sbjct: 167 ALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFI 226

Query: 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309
            +TGS  +G  +   A   + P++LELGGK  A+V    +L++T + IIAG     +GQ 
Sbjct: 227 NFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGA-FGYSGQR 283

Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
           C  V  ++  +  A +L++ +R ++      NP +  D++ +++      +  L+  D  
Sbjct: 284 CTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLI-NDAN 342

Query: 370 SD--KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKS 427
                 +   +R+     I P +   V  D  +  EE FGP+LPI+ V  +E++ ++   
Sbjct: 343 DKGATALTEIKREG--NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNK 400

Query: 428 KPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF 487
               L A  F++D        + +  G +  N+     T  + PF G  +SG G    K+
Sbjct: 401 SEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGT-DNFPFLGAKKSGAGIQGVKY 459

Query: 488 SFDAFSHKKAV 498
           S +A +  K+V
Sbjct: 460 SIEAMTTVKSV 470

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  205 bits (524), Expect = 7e-60
 Identities = 97/417 (23%), Positives = 178/417 (42%), Gaps = 25/417 (5%)

Query: 98  IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---W-TKPEKAK 153
            A ++  ++ E+   +  ++ K   E   ++++        A+  ++Y      +     
Sbjct: 105 AAALMRRRKRELEATLVYEVGKNWVEA-SADVAE-------AIDFIEYYARAALRYRYPA 156

Query: 154 TSLTTYP-SSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
             +  YP    E    PLG  +VI+ WN+P  +    ++G +A GN V+ KP+E A    
Sbjct: 157 VEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVG 216

Query: 213 SLLAKLLEDY-VDNSAVRVVEGAVAET-SALLE-QKWDKILYTGSPRVGRIVMAAAAK-- 267
           + + ++  +       V  + G   E  + L+E  +   I +TGS  VG  +  AA +  
Sbjct: 217 AKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLA 276

Query: 268 ----HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFA 323
                     +E GGK+  +VD T +  +    ++        GQ C     +I T+   
Sbjct: 277 PGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVS-AYGFQGQKCSAASRLILTQGAY 335

Query: 324 PKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ 383
             +++ +    +        E+ DL  +V+     ++ S ++  K   ++V GG+R E +
Sbjct: 336 EPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGE 395

Query: 384 -LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQ 442
              IAPT+  +VP  + I +EEIFGP+L ++ V+   ++ +V    P  L    +S   +
Sbjct: 396 GYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKRE 455

Query: 443 MKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF-DAFSHKKAV 498
             +   +    G + FN  I    V   PFGG   SG  +  G   +   F   KAV
Sbjct: 456 HLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score =  203 bits (520), Expect = 2e-59
 Identities = 102/434 (23%), Positives = 183/434 (42%), Gaps = 35/434 (8%)

Query: 83  RKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142
           R     E R++ ++  A++IE   +   E +  +  KP     + E+       +LA  +
Sbjct: 72  RDMPGTE-RLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVKAAVDRLRLAELD 129

Query: 143 LK---------YWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGA 193
           LK          WT        L           EPLGVV  I+ +NYP   +++ +  +
Sbjct: 130 LKKIGGDYIPGDWTYDTLETEGLV--------RREPLGVVAAITPFNYPLFDAVNKITYS 181

Query: 194 IAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLE-QKWDKILY 251
              GNAVV+KPS   P  +++  K L D      A+ ++     E   ++   +   + +
Sbjct: 182 FIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSF 241

Query: 252 TGSPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQAC 310
           TGS  VG  V+     K      +ELGG  PA+V    +L +   +I  G   +  GQ C
Sbjct: 242 TGSTEVGERVVKVGGVKQYV---MELGGGDPAIVLEDADLDLAADKIARGI-YSYAGQRC 297

Query: 311 IGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKV 369
             +  ++  +    KL++ +   L      +P +   D+  +++P     + + + ED V
Sbjct: 298 DAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAI-EDAV 356

Query: 370 SD--KIVYGGQRDEKQLKIAPTILL---DVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDV 424
               +++ GG+R      + PT +    D   D  + K E+F P+   V V+ ++ + ++
Sbjct: 357 EKGGRVLAGGRRLGPTY-VQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIEL 415

Query: 425 IKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYH 484
              +P  L A  F  D    +  V+ +  G I  ND   H      PFGG  +SG+    
Sbjct: 416 ANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGI-GYYPFGGRKKSGVFREG 474

Query: 485 GKFSFDAFSHKKAV 498
             ++ +A +  K +
Sbjct: 475 IGYAVEAVTAYKTI 488

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score =  203 bits (519), Expect = 3e-59
 Identities = 106/431 (24%), Positives = 194/431 (45%), Gaps = 32/431 (7%)

Query: 83  RKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142
           +    +E R+  + + A+++EE++E I E I  +++KP     I E+S T    +    E
Sbjct: 66  KIRPIHE-RVDLLYAWADLLEERKEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADE 123

Query: 143 LK----------YWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG 192
                        +      K +L           EPLGVVL IS +NYP  L+   +  
Sbjct: 124 ALRLNGETLKGDQFKGGSSKKIALV--------EREPLGVVLAISPFNYPVNLAAAKIAP 175

Query: 193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQ--KWDKI 249
           A+  GN VV KP+     +   + + L D       ++VV G  +     L +    D I
Sbjct: 176 ALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMI 235

Query: 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309
            +TG    G  +   A   + PV+LELGGK PA+V    +L++T  +I++G   + +GQ 
Sbjct: 236 TFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGA-FSYSGQR 292

Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
           C  +  +      A +L+ +++  +++    +P +  D++ +++    A +  L+ +D +
Sbjct: 293 CTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLI-DDAL 351

Query: 370 SD--KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKS 427
            +   ++ G +R      ++PT+L DV     +  EE FGP+LPI+ V+   ++  +   
Sbjct: 352 ENGATLLSGNKRQG--NLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQ 409

Query: 428 KPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF 487
               L A  F+ D        +++  G +  N           PF GV +SG+G    K 
Sbjct: 410 SDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTE-RGPDHFPFLGVKKSGLGVQGIKP 468

Query: 488 SFDAFSHKKAV 498
           S  + + ++  
Sbjct: 469 SLLSMTRERVT 479

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score =  201 bits (514), Expect = 1e-58
 Identities = 96/431 (22%), Positives = 176/431 (40%), Gaps = 42/431 (9%)

Query: 91  RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WT 147
           R+  ++ I  + E++  ++ + I  ++  P      ++ +            ++      
Sbjct: 87  RLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTAT-------GSSHIRNFIKAY 139

Query: 148 KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEI 207
           K    + +L      A +  + +GVV +I+ WN+P       VI A+ AG  +VLKPSEI
Sbjct: 140 KEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEI 199

Query: 208 APATSSLLAKLLEDY-----VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRI 260
           AP ++ L A++L++      V N    ++ G  A   + L      + I +TGS R G+ 
Sbjct: 200 APLSAMLFAEILDEAALPSGVFN----LINGDGANVGSYLSAHPDLEMISFTGSTRAGKD 255

Query: 261 VMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320
           +   A+  L  V LELGGK   ++ +  ++    R +       N+GQ+C        T+
Sbjct: 256 ISKNASNTLKRVCLELGGKGANIIFADADIDALQRGVRHC--FYNSGQSCNA-----PTR 308

Query: 321 DFAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KI 373
               + I D      K+   K       ++   +  +V+   + ++  L+         +
Sbjct: 309 MLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATL 368

Query: 374 VYGGQRDEKQLK----IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP 429
           V GG      ++    + PT+  DV     I +EEIFGP+L ++     +++  +     
Sbjct: 369 VTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTE 428

Query: 430 KPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF 489
             L  Y  S D    +     + +G +  N   +        FGGV  SG     G +  
Sbjct: 429 YGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGHELPGGS---YFGGVKFSGRAREGGLWGI 485

Query: 490 DAFSHKKAVLY 500
             F   KA+ Y
Sbjct: 486 KEFLDTKAISY 496

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score =  199 bits (508), Expect = 8e-58
 Identities = 97/418 (23%), Positives = 178/418 (42%), Gaps = 41/418 (9%)

Query: 99  ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTT 158
              + E  ++II  I ++      ++ I E+  T +    A+         +        
Sbjct: 76  RGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVK-------E 127

Query: 159 YPSSAE-----IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS 213
            PS  E     I   PLGV+  IS +N+P  LS+  +  AIA GN+VV KP      +  
Sbjct: 128 VPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG 187

Query: 214 LL-AKLLEDY-----VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAA 265
            + AK  E       V N    V+   V E    +        I +TGS  VGR +   A
Sbjct: 188 TIIAKAFEHAGLPAGVLN----VMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIA 243

Query: 266 AKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK----D 321
            +    + LELGG +P  V S  ++       I GK++ + GQ C+ ++ II  +    +
Sbjct: 244 GRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFI-HQGQICMIINRIIVHQDVYDE 302

Query: 322 FAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQ 378
           F  K    ++ +L   +G +  + K  +  ++N     +   +++    +D  ++   G+
Sbjct: 303 FVEKFTARVK-QLP--YG-DQTDPKTVVGPLINERQIEKALEIIE-QAKTDGIELAVEGK 357

Query: 379 RDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFS 438
           R      + P + +   ++S I + E+F P+  I+     +++ D+       L++  F+
Sbjct: 358 RVG--NVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFT 415

Query: 439 DDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKK 496
            D +  ++F   I +G    ND  V+ + +   FGG   SG+G +   +  + F+  K
Sbjct: 416 SDLEKGEKFALQIDSGMTHVNDQSVNDSPNI-AFGGNKASGVGRFGNPWVVEEFTVTK 472

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score =  195 bits (499), Expect = 1e-56
 Identities = 119/433 (27%), Positives = 203/433 (46%), Gaps = 40/433 (9%)

Query: 83  RKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142
           +     + R + + +IA  I+EK+EE+ + +  D  KP  +    E+  +  + KLA   
Sbjct: 51  KNLPITK-RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQA-RVEVERSIGTFKLAAFY 108

Query: 143 LKYW---TKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 199
           +K       P   +   T          EP+G+V  I+ +N+P  LS   +  AIA GN 
Sbjct: 109 VKEHRDEVIPSDDRLIFT--------RREPVGIVGAITPFNFPLNLSAHKIAPAIATGNV 160

Query: 200 VVLKPSEIAPATSSLLAKLLEDYVDNS-----AVRVVEGAVAETSALLEQ--KWDKILYT 252
           +V  PS  AP     LAK++E+ +           ++ GA       +    K + I +T
Sbjct: 161 IVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFT 220

Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
           GS +VG ++   A      + LELGG +P +V    +L      +I G      GQ CI 
Sbjct: 221 GSSKVGELITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGS-FIYAGQVCIS 277

Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD 371
           V  I+  +  A K I+   N+ K     NP++ K D+  +++  H   +  ++ E  + +
Sbjct: 278 VGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVV-EKAIDE 336

Query: 372 --KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK--- 426
             K++ GG+RD+      PTI L+V  D+ + K E F P++PI+     E+  ++I    
Sbjct: 337 GGKLLLGGKRDKAL--FYPTI-LEVDRDNILCKTETFAPVIPIIRTN--EE--EMIDIAN 389

Query: 427 SKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDT-IVHTTVSSLPFGGVGESGMGSYHG 485
           S    L +  F++D     +F +N+  GG+V ND+ +        PFGGV +SG+G    
Sbjct: 390 STEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNM--PFGGVKKSGLGREGV 447

Query: 486 KFSFDAFSHKKAV 498
           K++ +  S+ K +
Sbjct: 448 KYAMEEMSNIKTI 460

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score =  196 bits (500), Expect = 1e-56
 Identities = 109/431 (25%), Positives = 178/431 (41%), Gaps = 47/431 (10%)

Query: 91  RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WT 147
           R + I +   M+ E+++   + +  +  +PP                 ++  + Y     
Sbjct: 72  RAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMG-------SMGAMNYFAGAA 124

Query: 148 KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEI 207
                  + T     + +  EP+GVV  I  WN P  L+++ +  A+ AG  +VLKP+  
Sbjct: 125 DKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAE 184

Query: 208 APATSSLLAKLLEDY-----VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRI 260
            P T++ LA++  +      V +    VV G   ET   L      D   +TGS  VGR 
Sbjct: 185 TPLTANALAEVFAEVGLPEGVLS----VVPGG-IETGQALTSNPDIDMFTFTGSSAVGRE 239

Query: 261 VMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320
           V   AA+ L P  LELGGKS A++   ++L      ++    + N GQ C     +  T+
Sbjct: 240 VGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFS-GVMNAGQGC-----VNQTR 293

Query: 321 DFAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KI 373
             AP+   D +   +  F        P +    +  +++     R+   + +      ++
Sbjct: 294 ILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARL 353

Query: 374 VYGGQRDEKQLK---IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---S 427
           V GG R E       I PT+  DV +  TI +EEIFGP+L I+  +  E   D I     
Sbjct: 354 VCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEE---DAIAIAND 410

Query: 428 KPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF 487
               LA   ++ D     +  Q I  G    N           PFGG   SG+G  +G  
Sbjct: 411 SVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYAFDPGS---PFGGYKNSGIGRENGPE 467

Query: 488 SFDAFSHKKAV 498
             + F+ +K+V
Sbjct: 468 GVEHFTQQKSV 478

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score =  195 bits (498), Expect = 2e-56
 Identities = 99/424 (23%), Positives = 179/424 (42%), Gaps = 46/424 (10%)

Query: 98  IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
           IA+ IE++ +E   +EA+  +  KP       E+          +   ++     +   A
Sbjct: 93  IADAIEKEADEFAALEAL--NCGKPINAVKNDELPA-------IIDCWRFFAGAVRNLHA 143

Query: 153 KTSLTTYPSS-AEIISEPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPSEIA 208
             +    P   + I  +P+G+V  I+ WNYP ++    L P   AI  GN VV KPSE  
Sbjct: 144 PAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAP---AIGGGNTVVFKPSEQT 200

Query: 209 PATSSLLAKLLEDYVDNSAVRVVEGAVAET-SALLE-QKWDKILYTGSPRVGRIVMAAAA 266
           P T+  LA+L+ D +    V V+ G      +AL+   K   +  TG    G+ V+AAAA
Sbjct: 201 PLTALKLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAA 260

Query: 267 KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKL 326
           K +    LELGGK+P +V    +L+     I       N GQ C         + +A   
Sbjct: 261 KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTF-GYYNAGQDCTA-----ACRIYAEAG 314

Query: 327 I-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQ 378
           I + L  +L             +++ ++  +++     R+AS ++        +I  GG+
Sbjct: 315 IYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGR 374

Query: 379 R-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKPLAA 434
              ++     PT++     +  I++ E+FG   P+V+V +     D +         LA+
Sbjct: 375 TGSDEGFFFQPTVVAGATQEDEIVRREVFG---PVVSVTRFTGKDDAVAWANDSDYGLAS 431

Query: 435 YFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSH 494
             ++ D          +  G    N   +    + +P GG+ +SG G     ++ + ++ 
Sbjct: 432 SVWTKDISKAMRAASRLQYGCTWINTHFM--LTNEMPHGGIKQSGYGKDMSVYALEDYTA 489

Query: 495 KKAV 498
            + +
Sbjct: 490 VRHI 493

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score =  193 bits (493), Expect = 1e-55
 Identities = 104/424 (24%), Positives = 177/424 (41%), Gaps = 46/424 (10%)

Query: 98  IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
           +A++IEE  +    +E+   +  KP    F  EI          +   ++     +    
Sbjct: 91  LADVIEENGQVFAELESR--NCGKPLHSAFNDEIPA-------IVDVFRFFAGAARCLNG 141

Query: 153 KTSLTTYPSS-AEIISEPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPSEIA 208
             +        + I  +PLGVV  I+ WNYP +++   L P   A+AAGN VVLKPSEI 
Sbjct: 142 LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP---ALAAGNCVVLKPSEIT 198

Query: 209 PATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAA 266
           P T+  LA+L +D      V ++ G        L    K   +  TGS   G  +++  A
Sbjct: 199 PLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 258

Query: 267 KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKL 326
             +    +ELGGK+P +V    +++     +       N GQ C         + +A K 
Sbjct: 259 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTF-GYYNAGQDCTA-----ACRIYAQKG 312

Query: 327 I-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQ 378
           I D+L  +L           P +   +L  + +  H  R+   ++E K +   K++ GG+
Sbjct: 313 IYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE 372

Query: 379 R-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKPLAA 434
           +        APT+L     D  I+++E+FG   P+V+V   ++   V+         LA+
Sbjct: 373 KRKGNGYYYAPTLLAGALQDDAIVQKEVFG---PVVSVTPFDNEEQVVNWANDSQYGLAS 429

Query: 435 YFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSH 494
             ++ D          +  G    N   +   VS +P GG   SG G     +  + ++ 
Sbjct: 430 SVWTKDVGRAHRVSARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTV 487

Query: 495 KKAV 498
            + V
Sbjct: 488 VRHV 491

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score =  193 bits (493), Expect = 1e-55
 Identities = 119/433 (27%), Positives = 183/433 (42%), Gaps = 60/433 (13%)

Query: 98  IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
           IA  + EK+ E+  +E+I  D  KP        +              +Y     +   A
Sbjct: 81  IAAKVTEKKPELAKLESI--DCGKP--------LDEAAWDIDDVAGCFEYYADLAEKLDA 130

Query: 153 KTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPS 205
           +             S    EP+GVV +I+ WNYP L++   + P   A+AAG A +LKPS
Sbjct: 131 RQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAP---ALAAGCAAILKPS 187

Query: 206 EIAPATSSLLAKLLE-----DYVDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVG 258
           E+A  T   L ++ +       V N    ++ G   E  A L      DK+ +TGS   G
Sbjct: 188 ELASLTCLELGEICKEVGLPPGVLN----ILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243

Query: 259 RIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIIT 318
             +M AAA+ + PV LELGGKSP VV   ++L       I G     NGQ C       T
Sbjct: 244 SKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFG-CFWTNGQICSA-----T 297

Query: 319 TKDFAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD- 371
           ++    + I     N + ++       +P+E    L  +V+   + ++   +   K    
Sbjct: 298 SRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGA 357

Query: 372 KIVYGGQRDEKQLK---IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK-- 426
            I+ GG R E   K   I PTI+ DV  +  I +EE+FG   P++ V+      + I   
Sbjct: 358 TILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFG---PVLCVKTFSTEEEAIDLA 414

Query: 427 -SKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG 485
                 L A   S+D +  +   +   AG +  N +      +  P+GGV  SG G   G
Sbjct: 415 NDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCS--QPCFTQAPWGGVKRSGFGRELG 472

Query: 486 KFSFDAFSHKKAV 498
           ++  D +   K V
Sbjct: 473 EWGLDNYLSVKQV 485

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score =  188 bits (479), Expect = 1e-53
 Identities = 97/449 (21%), Positives = 179/449 (39%), Gaps = 40/449 (8%)

Query: 66  VEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125
           +  A +L K+ R+       +    R   +  IAN ++E E+E+ + +  ++ K   E+ 
Sbjct: 32  INLAHALYKKWRH-------EEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSES- 83

Query: 126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLL 185
             E+ +  S C           KP K  +       +A  + +  GV++    WN+P   
Sbjct: 84  KEEVELCVSICNYYADHGPEMLKPTKLNSD----LGNAYYLKQSTGVIMACEPWNFPLYQ 139

Query: 186 SLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLE- 243
            +         GN ++LK +   P +++L AK+++       ++  +  +  + + ++  
Sbjct: 140 VIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIAD 199

Query: 244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
            +   +  TGS R G  V  AA K+L    +ELGG    +V    + QV    +   +  
Sbjct: 200 PRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDAR-T 258

Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKD----LSRIVNPFHFAR 359
            N+GQ C     II  K    +++  L+N        +P+E+      ++          
Sbjct: 259 YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNS--------- 309

Query: 360 LASLLD--EDKVSD------KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLL 410
                +  E +V +      K+ Y     D K     PTIL D+  D+ +  +E+FGP+ 
Sbjct: 310 -EKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIA 368

Query: 411 PIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSL 470
            +  VE    +  +       L +     D    K+    I  G  V N   + +    L
Sbjct: 369 EVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGE--L 426

Query: 471 PFGGVGESGMGSYHGKFSFDAFSHKKAVL 499
           PFGG+ +SG G         AF ++  V+
Sbjct: 427 PFGGIKKSGYGRELSGLGLMAFVNEHLVI 455

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score =  186 bits (476), Expect = 2e-53
 Identities = 96/430 (22%), Positives = 170/430 (39%), Gaps = 33/430 (7%)

Query: 84  KTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL 143
           K  S   R   ++ I   +    EE+ + I +++ KP  +   +E++ + + C    +  
Sbjct: 46  KMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQA-RAEVTKSAALCDWYAEHG 104

Query: 144 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLK 203
                PE            A I   PLGV+L I  WN+P    L   +  + AGN+ +LK
Sbjct: 105 PAMLNPEPTLVEN----QQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLK 160

Query: 204 PSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLE-QKWDKILYTGSPRVGRIV 261
            +      + ++A++L +          V       S ++   +   +  TGS R G  +
Sbjct: 161 HAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAI 220

Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
            A A   L   +LELGG  P +V +  +L++  +  +AG+   N GQ C      I  + 
Sbjct: 221 GAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGR-YQNTGQVCAAAKRFIVEEG 279

Query: 322 FAPKLIDSLRNELKEFFGKNPMESKD----LSRIVNPFHFARLASLLD--EDKVSD---- 371
            A    D            +P+  ++    ++R            L D    +V      
Sbjct: 280 IAQAFTDRFVAAAAALKMGDPLVEENDLGPMAR----------FDLRDELHQQVQASVAE 329

Query: 372 --KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSK 428
             +++ GG++   +    A T+L DV  D T  ++E+FGP+  I   +    +  +    
Sbjct: 330 GARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDS 389

Query: 429 PKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS 488
              L+A  F+ D+ +  E    +  GG+  N          + FGGV +SG G     F 
Sbjct: 390 EFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDAR--VAFGGVKKSGFGRELSHFG 447

Query: 489 FDAFSHKKAV 498
              F + + V
Sbjct: 448 LHEFCNVQTV 457

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score =  188 bits (480), Expect = 2e-53
 Identities = 104/432 (24%), Positives = 189/432 (43%), Gaps = 59/432 (13%)

Query: 98  IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
           IA+ I+E  E +  +E +  D  K         +  + +          Y       +  
Sbjct: 103 IADKIKEHREALARLETL--DTGKT--------LEESYADMDDIHNVFMYFAGLADKDGG 152

Query: 153 KTSLTTYPSS-AEIISEPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPSEIA 208
           +   +  P + ++I+ EP+GVV  I+ WNYP L +   + P   A+A G ++V+KPSEI 
Sbjct: 153 EMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAP---ALATGCSLVMKPSEIT 209

Query: 209 PATSSLLAKLLEDY-----VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIV 261
           P T+  + +L+E+        N    ++ GA +E   ++    + D + +TG    G+ +
Sbjct: 210 PLTTIRVFELMEEVGFPKGTIN----LILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHI 265

Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
           M  AA ++T + LELGGK+P ++    + ++   + + G    + GQ C        ++ 
Sbjct: 266 MKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNG-GYFHAGQVCSA-----GSRI 319

Query: 322 FAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIV 374
                I D     L +   K    N  ++  ++  +++  H  ++ S +D  K     I 
Sbjct: 320 LVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIA 379

Query: 375 YGGQRDEKQLK-----IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK--- 426
            GG+R ++          PT++ +      I++EE+FG   P+VTVE  E   + I+   
Sbjct: 380 VGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFG---PVVTVEGFETEQEAIQLAN 436

Query: 427 SKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGK 486
                LA   FS D    +     +  G +  ND   H   +  P+GG  +SG+G   GK
Sbjct: 437 DSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDF--HPYFAQAPWGGYKQSGIGRELGK 494

Query: 487 FSFDAFSHKKAV 498
              + +   K +
Sbjct: 495 EGLEEYLVSKHI 506

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score =  186 bits (476), Expect = 4e-53
 Identities = 92/434 (21%), Positives = 171/434 (39%), Gaps = 54/434 (12%)

Query: 91  RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
           R+  ++  A  ++ + +E+   I ++  KP +E+  +E++   +   ++++  +      
Sbjct: 66  RIELLERFAATLKSRADELARVIGEETGKPLWES-ATEVTSMVNKVAISVQAFR------ 118

Query: 151 KAKTSLTTYPSSAE----IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE 206
             + +       A+    +  +P GVV V   +N+P  L    ++ A+ AGN VV KPSE
Sbjct: 119 --ERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSE 176

Query: 207 IAPATSSLLAKLLE-----DYVDNSAVRVVEGAVAETSALLEQKW-DKILYTGSPRVGRI 260
           + P  + L  K          V N    +V+G      AL   +  D + +TGS R G +
Sbjct: 177 LTPKVAELTLKAWIQAGLPAGVLN----LVQGGRETGVALAAHRGLDGLFFTGSSRTGNL 232

Query: 261 VMA-AAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITT 319
           + +    +    + LE+GG +P VV+   +L      II      + GQ C     ++  
Sbjct: 233 LHSQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSA-FISAGQRCTCARRLLVP 291

Query: 320 KD-----FAPKLIDSLRN--------ELKEFFGKNPMESKDLSRIVNPFHFARLASLLDE 366
           +         +L+             +   F G   +        ++      L     E
Sbjct: 292 QGAWGDALLARLVAVSATLRVGRFDEQPAPFMG--AV--------ISLSAAEHLLKAQ-E 340

Query: 367 DKVSD--KIVYGGQRDEKQLK-IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFD 423
             +    + +    +       + P I LDV   +    EE FGPLL ++       +  
Sbjct: 341 HLIGKGAQPLLAMTQPIDGAALLTPGI-LDVSAVAERPDEEFFGPLLQVIRYSDFAAAIR 399

Query: 424 VIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSY 483
              +    LAA   SD  +  ++F+    AG + +N  +     SS PFGG+G SG    
Sbjct: 400 EANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAA-SSAPFGGIGASGNHRP 458

Query: 484 HGKFSFDAFSHKKA 497
              ++ D  ++  A
Sbjct: 459 SAYYAADYCAYPVA 472

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score =  186 bits (474), Expect = 9e-53
 Identities = 116/441 (26%), Positives = 183/441 (41%), Gaps = 79/441 (17%)

Query: 98  IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
            A+++ E+ + +  +E +  D  KP  ET +++ +             ++         A
Sbjct: 83  AADIMRERNDALSTLETL--DTGKPIQETIVADPTS-------GADAFEFFGGI-----A 128

Query: 153 KTSLT--TYPSSAE---IISEPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKP 204
            ++L     P   +       PLGV + I  WNYP  ++     P   A+ AGNA+V KP
Sbjct: 129 PSALNGDYIPLGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAP---ALVAGNAMVFKP 185

Query: 205 SEIAPATSSLLAKLLE-----DYVDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRV 257
           SE  P  +  +A++L        + N    V++G   +T  LL       K+  TGS   
Sbjct: 186 SENTPLGALKIAEILIEAGLPKGLFN----VIQGD-RDTGPLLVNHPDVAKVSLTGSVPT 240

Query: 258 GRIVMAAAAKHLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDY 315
           GR V AAAA HL  V +ELGGKSP +V  D+ I   V            ++GQ C     
Sbjct: 241 GRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAV---GGAMLGNFYSSGQVCSN--- 294

Query: 316 IITTKDFAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKV 369
              T+ F  K         LK         +P++    L  +V+     ++ S +++ K 
Sbjct: 295 --GTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKA 352

Query: 370 SD-KIVYGGQRDEKQLK----IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDV 424
               ++ GG            + PT+  DV DD TI +EEIFG   P++ V   +D  +V
Sbjct: 353 EGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFG---PVMCVLDFDDEDEV 409

Query: 425 IK---SKPKPLAAYFFSDDEQMKKEFVQNISAGGIV----FNDTIVHTTVSSLPFGGVGE 477
           +    +    LA   F+ D       V  + A G +    +N   V       PFGG  +
Sbjct: 410 LARANATEFGLAGGVFTADLARAHRVVDGLEA-GTLWINTYNLCPVEI-----PFGGSKQ 463

Query: 478 SGMGSYHGKFSFDAFSHKKAV 498
           SG G  +   + + +S  K V
Sbjct: 464 SGFGRENSAAALEHYSELKTV 484

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score =  185 bits (471), Expect = 2e-52
 Identities = 109/442 (24%), Positives = 181/442 (40%), Gaps = 79/442 (17%)

Query: 98  IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
            A +I E+ + I  +E I  +  K         I+  +     A + ++Y          
Sbjct: 89  AARIIRERRDNIAKLEVI--NNGKT--------ITEAEYDIDAAWQCIEYYAGLA----P 134

Query: 153 KTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPS 205
             S           +    EPLGV   I  WNYPF+++     P   A+A GNAVV KPS
Sbjct: 135 TLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAP---ALACGNAVVFKPS 191

Query: 206 EIAPATSSLLAKLLE-----DYVDNSAVRVVEGAVAETSALLE-QKWDKILYTGSPRVGR 259
            + P T  +LA++         + N    VV+G     S L       K+ +TGS   G+
Sbjct: 192 PMTPVTGVILAEIFHEAGVPVGLVN----VVQGGAETGSLLCHHPNVAKVSFTGSVPTGK 247

Query: 260 IVMAAAAKHLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317
            VM  +AK +  V LELGGKSP ++  D  +   V   R          GQ C       
Sbjct: 248 KVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAV---RGALMANFLTQGQVCTN----- 299

Query: 318 TTKDFAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD 371
            T+ F  + I      E+ +        +P+ ++  +  +++     ++   + + K   
Sbjct: 300 GTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEG 359

Query: 372 -KIVYGGQRDEKQLK-------IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFD 423
            +++ GG+              ++P +L +  DD T +KEEIFG   P+++V   +   +
Sbjct: 360 ARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFG---PVMSVLPFDTEEE 416

Query: 424 VIK---SKPKPLAAYFFSDDEQMKKEFVQNISAGGIV----FNDTIVHTTVSSLPFGGVG 476
           V++   +    LA+  F+ D         N+ A G      ++ + V       PFGG  
Sbjct: 417 VLQRANNTTFGLASGVFTRDISRAHRVAANLEA-GTCYINTYSISPVEV-----PFGGYK 470

Query: 477 ESGMGSYHGKFSFDAFSHKKAV 498
            SG G  +G+ + D +S  K V
Sbjct: 471 MSGFGRENGQATVDYYSQLKTV 492

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  191 bits (486), Expect = 3e-52
 Identities = 83/433 (19%), Positives = 154/433 (35%), Gaps = 27/433 (6%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           +V  A   +   +  + + +      R   +   A    ++  E+      ++ K   + 
Sbjct: 569 EVGDA---IAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQA 625

Query: 125 FISEISMTKSSCKLALKELKY---WTKPEKAKTSLTTYPS-SAEIISEPLGVVLVISTWN 180
             ++++        A+  L+Y             +   P        EP GV  VI+ WN
Sbjct: 626 -YADVT-------EAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWN 677

Query: 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETS 239
           +P  +S+     AI  GN VV KPS I       L +L  +  +         G  +   
Sbjct: 678 FPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMG 737

Query: 240 ALL--EQKWDKILYTGSPRVGRIVMAAAAK------HLTPVILELGGKSPAVVDSTINLQ 291
             L        I +TGS   G  ++  AAK      ++  +I E+GGK+  ++D   +L 
Sbjct: 738 DYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLD 797

Query: 292 VTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSR 350
                ++        GQ C     +I       K I+ L +  K        +    +  
Sbjct: 798 EAVPHVLYSA-FGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGA 856

Query: 351 IVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTILLDVPDDSTIMKEEIFGPL 409
           + +      +    +  K    ++Y       +   +  TI+  +  +  I +EEIFGP+
Sbjct: 857 VADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPV 916

Query: 410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSS 469
           L ++  +  + + +   S    L    FS   +   +  +    G +  N       V  
Sbjct: 917 LAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVER 976

Query: 470 LPFGGVGESGMGS 482
            PFGG   SG+G+
Sbjct: 977 QPFGGARMSGVGT 989

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score =  185 bits (471), Expect = 4e-52
 Identities = 116/429 (27%), Positives = 195/429 (45%), Gaps = 56/429 (13%)

Query: 98  IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
           +A++I  ++EE+  IE++  ++ KP        I+  +           Y     +  + 
Sbjct: 94  VADLILARQEELALIESL--EVGKP--------IAQARGEIGFCADLWSYAAGQARALEG 143

Query: 153 KTSLTTYPSS-AEIISEPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPSEIA 208
           +T           ++ EP+GVV +I+ WN+PF+++   +     AI +G  VVLKPSE  
Sbjct: 144 QTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPW---AIGSGCTVVLKPSEFT 200

Query: 209 PATSSLLAKLLE-----DYVDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIV 261
             TS  LA+L       D V N    VV G       +L +    D + +TGS RVG  +
Sbjct: 201 SGTSIRLAELAREAGIPDGVFN----VVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKL 256

Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
              AA+ +  V LELGGK P +V +  +L      I  G    N GQ CI       ++ 
Sbjct: 257 GEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYG-VYHNAGQCCIS-----GSRL 310

Query: 322 FAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIV 374
              + I D+L   L +   K    +P+  +  +  +++  H  ++ S +     S  +++
Sbjct: 311 LVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELL 370

Query: 375 YGGQR--DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKP 429
            GG+R   E  L  APT+   V  D +I +EEIFG   P+++    + + + +    +  
Sbjct: 371 LGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFG---PVLSTLTFKTADEAVALANATE 427

Query: 430 KPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF 489
             L+A  +S + +   + ++ I AG    N   V      LP GG  +SG+G   G++ F
Sbjct: 428 FGLSASVWSTNLETALQTIRRIRAGRCWINS--VIDGTPELPIGGYKKSGLGRELGRYGF 485

Query: 490 DAFSHKKAV 498
           D +S  K V
Sbjct: 486 DEYSQFKGV 494

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score =  180 bits (459), Expect = 1e-50
 Identities = 112/427 (26%), Positives = 184/427 (43%), Gaps = 52/427 (12%)

Query: 98  IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
           +A++IE     +  +EA+  +  K     ++ ++          +K L+Y   W      
Sbjct: 92  LADLIERDRLLLATMEAM--NGGKLFSNAYLMDLGG-------CIKTLRYCAGWAD---- 138

Query: 153 KTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPS 205
           K    T P      +    EP+GV   I  WN+P L+    + P   A++ GN VV+KP+
Sbjct: 139 KIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGP---ALSCGNTVVVKPA 195

Query: 206 EIAPATSSLLAKLLE-----DYVDNSAVRVVEGAVAET-SALLE-QKWDKILYTGSPRVG 258
           E  P T+  +  L++       V N    +V G      +A+      DK+ +TGS  VG
Sbjct: 196 EQTPLTALHMGSLIKEAGFPPGVVN----IVPGYGPTAGAAISSHMDVDKVAFTGSTEVG 251

Query: 259 RIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317
           +++  AA K +L  V LELGGKSP +V +  +L         G    + GQ CI    + 
Sbjct: 252 KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQG-VFYHQGQCCIAASRLF 310

Query: 318 TTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVY 375
             +    + +       K++   NP+         ++   + ++  L++  K    K+  
Sbjct: 311 VEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLEC 370

Query: 376 GGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKP 431
           GG     K   I PT+  DV DD  I KEEIFGP+  I+  + ++   DVIK   +    
Sbjct: 371 GGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLD---DVIKRANNTFYG 427

Query: 432 LAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDA 491
           L+A  F++D          + +G +  N        +  PFGG   SG G   G++ F  
Sbjct: 428 LSAGIFTNDIDKAITVSSALQSGTVWVNC--YSVVSAQCPFGGFKMSGNGRELGEYGFHE 485

Query: 492 FSHKKAV 498
           ++  K V
Sbjct: 486 YTEVKTV 492

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score =  177 bits (452), Expect = 1e-49
 Identities = 119/427 (27%), Positives = 188/427 (44%), Gaps = 52/427 (12%)

Query: 98  IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
           +A++IE     +  +E +  D  KP   +++ ++ M        LK L+Y   W      
Sbjct: 91  LADLIERDRTYLAALETL--DNGKPYVISYLVDLDM-------VLKCLRYYAGWAD---- 137

Query: 153 KTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPS 205
           K    T P   +  S    EP+GV   I  WN+P L+    L P   A+A GN VV+K +
Sbjct: 138 KYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGP---ALATGNVVVMKVA 194

Query: 206 EIAPATSSLLAKLLE-----DYVDNSAVRVVEGAVAET-SALLE-QKWDKILYTGSPRVG 258
           E  P T+  +A L++       V N    +V G      +A+   +  DK+ +TGS  +G
Sbjct: 195 EQTPLTALYVANLIKEAGFPPGVVN----IVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 250

Query: 259 RIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317
           R++  AA   +L  V LELGGKSP ++ S  ++     +        N GQ         
Sbjct: 251 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA-LFFNQGQCSCAGSRTF 309

Query: 318 TTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVY 375
             +D   + ++      K     NP +SK +    V+   F ++   ++  K    K++ 
Sbjct: 310 VQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLC 369

Query: 376 GGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKP 431
           GG    ++   I PT+  DV D  TI KEEIFGP++ I+  + IE   +V+    +    
Sbjct: 370 GGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE---EVVGRANNSTYG 426

Query: 432 LAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDA 491
           LAA  F+ D        Q + AG +  N        +  PFGG   SG G   G++   A
Sbjct: 427 LAAAVFTKDLDKANYLSQALQAGTVWVNC--YDVFGAQSPFGGYKMSGSGRELGEYGLQA 484

Query: 492 FSHKKAV 498
           ++  K V
Sbjct: 485 YTEVKTV 491

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score =  177 bits (452), Expect = 1e-49
 Identities = 105/441 (23%), Positives = 194/441 (43%), Gaps = 72/441 (16%)

Query: 98  IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---W-TKPEK 151
           IA +IE+  +E+  +E +  D  +         + + ++    A +   +   +     +
Sbjct: 95  IAELIEKHADELAVMECL--DAGQV--------LRIVRAQVARAAENFAFYAEYAEHAME 144

Query: 152 AKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPSEIA 208
            +T           +  P G V +I+ WN P +LS   + P   A+A GN VVLKP+E +
Sbjct: 145 DRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAP---ALAFGNTVVLKPAEWS 201

Query: 209 PATSSLLAKLLEDY-----VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIV 261
           P T++ LA++L++      V N    +V+G   E  A L        +  TG    G+IV
Sbjct: 202 PFTATKLAEILKEADLPPGVFN----LVQGFGEEAGAALVAHPLVPLLTLTGETETGKIV 257

Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
           M  AA HL  +  ELGGKSPA+V +  +L+     ++     + NG+ C       +++ 
Sbjct: 258 MRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQ-IFSFNGERCTA-----SSRL 311

Query: 322 FAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIV 374
              + I +    ++ E        +P++ + ++  +++P H  R+   ++  K    +++
Sbjct: 312 LVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLL 371

Query: 375 YGGQRDEKQLK---------IAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVI 425
            GG+R +   +         + PT+ +   +   I +EEIFG   P++     +D  + +
Sbjct: 372 VGGERAKTSFRGEDLSRGNYLLPTVFVGE-NHMKIAQEEIFG---PVLVAIPFKDEEEAL 427

Query: 426 K---SKPKPLAAYFFSDDEQMKKEFVQNISAGGIV----FNDTIVHTTVSSLPFGGVGES 478
           +        LAAY F+ D +        + A G+V     N   + T     PFGGV  S
Sbjct: 428 RKANDTKYGLAAYVFTRDLERAHRLALELEA-GMVYLNSHNVRHLPT-----PFGGVKGS 481

Query: 479 GMGSYHGKFSFDAFSHKKAVL 499
           G     G ++ D ++  K + 
Sbjct: 482 GDRREGGTYALDFYTDLKTIA 502

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  176 bits (450), Expect = 2e-49
 Identities = 66/350 (18%), Positives = 138/350 (39%), Gaps = 29/350 (8%)

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIG-----AIAAGNAVVLKPSEIAPATSSLLAKLLEDY 222
            P+G+V +I+ +N+P       V G     A+  GN  + K +      S  + K++   
Sbjct: 156 NPVGLVGIITAFNFPVA-----VYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKV 210

Query: 223 VDNSAV-----RVVEGAVAETSALLEQKW-DKILYTGSPRVGRIVMAAAAKHLTPVILEL 276
           ++++ +      +  G     +A+ + +  + + +TGS +VG+ V     +     +LEL
Sbjct: 211 LEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLEL 270

Query: 277 GGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE 336
           GG +  +     +L +     +    +   GQ C     +   +    ++++ L+    +
Sbjct: 271 GGNNAIIAFEDADLSLVVPSALFAA-VGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQ 329

Query: 337 FFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQR-DEKQLKIAPTILL 392
               NP +       +      +     + E+   +   +VYGG+  D     + PTI+ 
Sbjct: 330 IRVGNPWDPNVLYGPLHTKQAVSMFLGAV-EEAKKEGGTVVYGGKVMDRPGNYVEPTIVT 388

Query: 393 DVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNIS 452
            +  D++I   E F P+L +   +  E+ F       + L++  F+ D  + + F     
Sbjct: 389 GLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKD--LGRIFRWLGP 446

Query: 453 AG---GIV-FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            G   GIV  N       +    FGG   +G G   G  ++  +  +   
Sbjct: 447 KGSDCGIVNVNIPTSGAEI-GGAFGGEKHTGGGRESGSDAWKQYMRRSTC 495

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score =  172 bits (439), Expect = 8e-48
 Identities = 107/433 (24%), Positives = 181/433 (41%), Gaps = 58/433 (13%)

Query: 98  IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---W-TKPEK 151
           +A+++E+ +EE+  IEA+  D          + + M       +++  +Y   W  K + 
Sbjct: 107 LADVMEQHQEELATIEAL--DAGAVYTLALKTHVGM-------SIQTFRYFAGWCDKIQ- 156

Query: 152 AKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKP 204
             T           ++    EP+GV  ++  WNYP ++           +AAGN VV+KP
Sbjct: 157 GATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAA---CLAAGNTVVIKP 213

Query: 205 SEIAPATSSLLAKLLE-----DYVDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRV 257
           +++ P T+   A+L         V N    ++ G+ +     L       KI +TGS  V
Sbjct: 214 AQVTPLTALKFAELTLKAGIPKGVVN----ILPGSGSLVGQRLSDHPDVRKIGFTGSTEV 269

Query: 258 GRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYI 316
           G+ +M + A  ++  V LELGGKSP ++ +  +L    +  ++     N G+ CI     
Sbjct: 270 GKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSS-VFFNKGENCIA---- 324

Query: 317 ITTKDFAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVS 370
              + F  + I +    ++ E   K    NP+E   +     +  H  +L          
Sbjct: 325 -AGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKE 383

Query: 371 D-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK-- 426
              +V GG +         PT+  DV D   I KEE FGP++ I       D   V+   
Sbjct: 384 GATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRF-ADGDVDAVLSRA 442

Query: 427 -SKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG 485
            +    LA+  F+ D          + A G VF +T  + T  + PFGG  +SG G   G
Sbjct: 443 NATEFGLASGVFTRDINKALYVSDKLQA-GTVFINT-YNKTDVAAPFGGFKQSGFGKDLG 500

Query: 486 KFSFDAFSHKKAV 498
           + + + +   K V
Sbjct: 501 EAALNEYLRIKTV 513

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score =  170 bits (433), Expect = 3e-47
 Identities = 97/364 (26%), Positives = 159/364 (43%), Gaps = 48/364 (13%)

Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-- 222
           +    LGV   I  WN+PF L    +  A+  GN +V+KPSE  P  +   AK++++   
Sbjct: 138 LFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGL 197

Query: 223 ---VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILELG 277
              V N    +V G        L    K   +  TGS   G  +MA AAK++T V LELG
Sbjct: 198 PRGVFN----LVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELG 253

Query: 278 GKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335
           GK+PA+V  D+ + L V    I+  + + N+GQ C   + +   K    + ++ L   ++
Sbjct: 254 GKAPAIVMDDADLELAVKA--IVDSR-VINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQ 310

Query: 336 EFFGKNPMESKDLSR--IVNPFHFARLASLLDEDKVSD--KIVYGGQR-DEKQLKIAPTI 390
                NP E  D++   ++N     R+   +    V +  ++ +GG+  + K     PT+
Sbjct: 311 AVQFGNPAERNDIAMGPLINAAALERVEQKVA-RAVEEGARVAFGGKAVEGKGYYYPPTL 369

Query: 391 LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKPLAAYFFSDD------- 440
           LLDV  + +IM EE FGP+LP+V  + +E   D I         L +  ++ +       
Sbjct: 370 LLDVRQEMSIMHEETFGPVLPVVAFDTLE---DAISMANDSDYGLTSSIYTQNLNVAMKA 426

Query: 441 -EQMKKEFVQNISAGGIV-FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            + +  +F       G    N              G  +SG+G   GK     +   + V
Sbjct: 427 IKGL--KF-------GETYINRENFEAMQG--FHAGWRKSGIGGADGKHGLHEYLQTQVV 475

Query: 499 LYRS 502
             +S
Sbjct: 476 YLQS 479

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score =  171 bits (435), Expect = 3e-47
 Identities = 78/425 (18%), Positives = 147/425 (34%), Gaps = 42/425 (9%)

Query: 98  IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKL---ALKELKYWTKP-EKAK 153
           IA+ +E + ++II   H + + P       EI+ T +  +L    +    Y     +   
Sbjct: 61  IASELEARSDDIIARAHLETALPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPN 119

Query: 154 TSLTTYPSS-AEIISEPLGVVLVISTWNYPFLLSLDPVIG-----AIAAGNAVVLKPSEI 207
            +    P          LG V V    N+P   S     G     A+AAG  V++K    
Sbjct: 120 PTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFS---AAGGDTASALAAGCPVIVKGHTA 176

Query: 208 APATSSLLAKLLEDYVDNS-----AVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRI 260
            P TS ++A+ +E  +           +++G        L    +   + +TGS   GR 
Sbjct: 177 HPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRA 236

Query: 261 VMAAAAKHLTPV--ILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYI 316
           +   A +   P+    ELG  +P  +   +         + +A   M   GQ C     +
Sbjct: 237 LFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTM-GCGQFCTKPGVV 295

Query: 317 ITTKD-FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVY 375
                      I++ ++ +++        S  L+  +   + +++ S   +D +   + +
Sbjct: 296 FALNTPETQAFIETAQSLIRQQ-----SPSTLLTPGIRDSYQSQVVSRGSDDGI--DVTF 348

Query: 376 GGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAY 435
                            +        +EEIFGP   IV  E + D   + +     L A 
Sbjct: 349 SQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTAT 408

Query: 436 FFSD--DEQMKKEFVQNIS--AGGIVFNDTIVHTTVS-SLPFGGVGESGMGSYH---GKF 487
             +   D     + +  +   AG +VFN       V  ++  GG   +   S     G  
Sbjct: 409 IHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAE 468

Query: 488 SFDAF 492
           +   +
Sbjct: 469 AIHRW 473

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score =  175 bits (445), Expect = 7e-47
 Identities = 95/428 (22%), Positives = 178/428 (41%), Gaps = 19/428 (4%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
             ++A + +   R  +          R + ++  A+++E +    I  + ++  K   + 
Sbjct: 548 TPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDA 607

Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
            +SE+      C+    + +     E A    T    S  +     GV + IS WN+P  
Sbjct: 608 -LSELREAADFCRYYAAQGRKLFGSETAMPGPT--GESNALTMRGRGVFVAISPWNFPLA 664

Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVV--EGAVAETSAL 241
           + L  V  A+ AGN+VV KP+E  P  +     LL +  +  SA+ +V  +G +    AL
Sbjct: 665 IFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRIGA--AL 722

Query: 242 LE-QKWDKILYTGSPRVGRIVMAAAAKH---LTPVILELGGKSPAVVDSTINLQVTTRRI 297
                   +++TGS  V R +  A A     + P+I E GG +  + D+T   +     +
Sbjct: 723 TAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDV 782

Query: 298 IAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFH 356
           +      + GQ C  +  +   +D A ++I+ +    +E    +P + +  +  +++   
Sbjct: 783 VTSA-FRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEA 841

Query: 357 FARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV- 415
             RL + +   K   ++ + G   E    +AP I      ++  + EE+FGP+L +V   
Sbjct: 842 KQRLDAHIARMKTEARLHFAGPAPEGCF-VAPHIFELT--EAGQLTEEVFGPILHVVRYR 898

Query: 416 -EKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGG 474
            E +E     I+     L     S  +   +  +  +  G I  N  ++   V   PFGG
Sbjct: 899 PENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGG 958

Query: 475 VGESGMGS 482
            G SG G 
Sbjct: 959 NGLSGTGP 966

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score =  169 bits (429), Expect = 3e-46
 Identities = 66/462 (14%), Positives = 145/462 (31%), Gaps = 82/462 (17%)

Query: 98  IANMIEEKEEEIIEAIHKDLSKPPFETFI---SEISMTKSSCKLA--LKELKYWTKPEKA 152
           I  +++ K  +       +      ++ +     I       KL   L E+         
Sbjct: 75  IVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAE 134

Query: 153 KTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
             S     S+  ++S   GV L I+ +N+P     +    A+ +G  V++KP+      +
Sbjct: 135 SLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLT 194

Query: 213 SLLAKLLEDYVD--NSAVRVVEGAVAET-SALLEQKWDKILYTGSPRVGRIVMAAAAK-- 267
             +   + D       A+ ++ G+ A     +     D + +TGS      + A  A   
Sbjct: 195 QRMVADVVDAGILPPGALSIICGSSAGLLDQIRSF--DVVSFTGSADTAATLRAHPAFVQ 252

Query: 268 HLTPVILELGGKSPAVV-----DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDF 322
               + ++    + A++       T    +  + ++       +GQ C         + F
Sbjct: 253 RGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREM-TVKSGQKCTA-----IRRAF 306

Query: 323 AP-KLIDSLRNELKEFFGK----NPM-ESKDLSRIVNPFHFAR----LASLLDEDKVSDK 372
            P   ++ +   LK    K    NP  ++  +  +V+   +      +A+L +E   +  
Sbjct: 307 VPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREE---AVL 363

Query: 373 IVYGGQRDEKQLK------IAPTILL--DVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDV 424
                              +AP + +  D  + + +   E+FGP+  +         + V
Sbjct: 364 AYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAP-------YRV 416

Query: 425 IKSKPKP---------------LAAYFFSDDEQMKKEFVQNISAGGIVFND--------- 460
                                 L A  +S+D+         ++      +          
Sbjct: 417 TTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQ 476

Query: 461 TIVHTTVSSLPFGGVGESG----MGSYHGKFSFDAFSHKKAV 498
           T     +     GG G +G    +G          +  + A+
Sbjct: 477 TGHGNVMPMSLHGGPGRAGGGEELGGLRA---LAFYHRRSAI 515

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score =  159 bits (403), Expect = 4e-43
 Identities = 81/467 (17%), Positives = 165/467 (35%), Gaps = 80/467 (17%)

Query: 54  MAAEEKQMQRFD-----VEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEE 108
           M+ E+K ++        +E A    KEL          S +   + +++IA+      E+
Sbjct: 1   MSLEDKDLRSIQEVRNLIESANKAQKELA-------AMSQQQIDTIVKAIADAGYGAREK 53

Query: 109 IIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEI-IS 167
           + +  H++     ++  + +          A K +  + K  K    L        + ++
Sbjct: 54  LAKMAHEETGFGIWQDKVIKN-------VFASKHVYNYIKDMKTIGMLKEDNEKKVMEVA 106

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNS- 226
            PLGVV  +     P    +   + +I AGN++V  P   A        +++ +  + + 
Sbjct: 107 VPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAG 166

Query: 227 ----AVRVVEGAVAE-TSALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKS 280
               A+  +     + T  L++      IL TG   + +    AA    TP I    G  
Sbjct: 167 CPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVK----AAYSSGTPAIGVGPGNG 222

Query: 281 PAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
           PA ++ + N+    + I+  K   +NG  C     ++  +     +I   R +   F   
Sbjct: 223 PAFIERSANIPRAVKHILDSK-TFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHF--L 279

Query: 341 NPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQL-KIAPTILLDVPDDST 399
           +  E+  L + +          L     ++  IV       K +  IA    L VP D+ 
Sbjct: 280 SDAEAVQLGKFI----------LRPNGSMNPAIV------GKSVQHIANLAGLTVPADAR 323

Query: 400 I-------------MKEEIFGPLLPIVTVEKIEDSF----DVIKSKPKPLAAYFFSDDEQ 442
           +                E   P+L   T E  +++     D++  +         S+D++
Sbjct: 324 VLIAEETKVGAKIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKE 383

Query: 443 MKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF 489
           + +EF        ++ N        +    GG+G     + +   + 
Sbjct: 384 IIREFALKKPVSRLLVN--------TPGALGGIG----ATTNLVPAL 418

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score =  153 bits (389), Expect = 2e-41
 Identities = 62/432 (14%), Positives = 146/432 (33%), Gaps = 66/432 (15%)

Query: 89  EWR-MSQ------IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALK 141
           E+   SQ       ++ +    +    + +   ++      E  + +            K
Sbjct: 22  EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYK 81

Query: 142 ELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 201
           + +     E+     T        I+EP+G++  I     P   ++   + ++   N ++
Sbjct: 82  DEQTCGILEEDDNLGTMT------IAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGII 135

Query: 202 LKPSEIAPATSSLLAKLLEDYVDNS-----AVRVVEGAVAE-TSALLEQ-KWDKILYTGS 254
             P   A  +++  AKL+ D    +      +  ++    E ++AL++      IL TG 
Sbjct: 136 FSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGG 195

Query: 255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVD 314
           P + +    AA     P I    G  P V+D T +++     ++  K   +NG  C    
Sbjct: 196 PGMVK----AAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSK-TFDNGVVCASEQ 250

Query: 315 YIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIV 374
            +I   +   ++ +   +        +  ++  + +++           L +  ++ KIV
Sbjct: 251 AVIVVDEVYDEVKERFASHKAHV--LSKTDADKVRKVL-----------LIDGALNAKIV 297

Query: 375 ----------YGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFD- 423
                      G +       +    L  V  D     E+   P L +   +  ED+   
Sbjct: 298 GQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAHEK-LSPTLGMFRADNFEDAVAQ 356

Query: 424 ---VIKSKPKPLAAYFFSDDEQMK---KEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGE 477
              +++       +  +++ +      + F   +    I+ N             GG+G 
Sbjct: 357 AVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILIN--------IPTTHGGIG- 407

Query: 478 SGMGSYHGKFSF 489
             + +++   S 
Sbjct: 408 -DLYNFNVAPSL 418

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score =  153 bits (390), Expect = 4e-41
 Identities = 89/359 (24%), Positives = 155/359 (43%), Gaps = 43/359 (11%)

Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
           I   P GVV+ I+ WN+P  L+   +  A+  GN +VLKP++  P  ++ L ++ ++  +
Sbjct: 144 IHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGL 203

Query: 224 DNSAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
            +  + V+ G  +     L +      I  TGS   G+ +   +A+++TPV+LELGGK+P
Sbjct: 204 PDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAP 263

Query: 282 AVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
            VV  D+ ++        + G+  AN GQ C  V+ +        + +      +K    
Sbjct: 264 MVVMDDADLDKAAED--ALWGR-FANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKV 320

Query: 340 KNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKI-----APTIL 391
            +PM++   +    N      +  ++  + +     +  GG+    +         PT+L
Sbjct: 321 GDPMDADSQMGPKCNQREIDNIDHIVH-EAIKQGATVATGGKTATVEGFEGGCWYEPTVL 379

Query: 392 LDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKPLAAYFFSDD-------- 440
           +DV  D+ ++ EE FGP+LPIV V  +E     I+        L+AY  +          
Sbjct: 380 VDVKQDNIVVHEETFGPILPIVKVSSME---QAIEFCNDSIYGLSAYVHTQSFANINQAI 436

Query: 441 EQMKKEFVQNISAGGIV-FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
             +  E        G V  N  +           G  +SG G   GKF  + +  KK V
Sbjct: 437 SDL--EV-------GEVYINRGMGEQHQG--FHNGWKQSGFGGEDGKFGLEQYLEKKTV 484

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score =  146 bits (372), Expect = 1e-38
 Identities = 97/349 (27%), Positives = 159/349 (45%), Gaps = 46/349 (13%)

Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE---- 220
           ++ +P+GV  VI+ WN+P  +    V  A+AAG  VV+KP+E  P ++  LA+L      
Sbjct: 142 VLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGI 201

Query: 221 -DYVDNSAVRVVEGAVAETSALLEQKW-DKILYTGSPRVGRIVMAAAAKHLTPVILELGG 278
              V N      + A     A+       KI +TGS   G+I++  AA  +  V +ELGG
Sbjct: 202 PSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGG 261

Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK----DFAPKLIDSLRNEL 334
            +P +V  + N+       +A K   N GQ C+  +  +  +     F     ++++  L
Sbjct: 262 LAPFIVFDSANVDQAVAGAMASK-FRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNL 320

Query: 335 KEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEK-QLKIAPTIL 391
           +   G    E      ++N     ++   ++ D VS    +V GG+R +  +    PT+L
Sbjct: 321 R--VGNGFEEGTTQGPLINEKAVEKVEKQVN-DAVSKGATVVTGGKRHQLGKNFFEPTLL 377

Query: 392 LDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKPLAAYFFSDD-------- 440
            +V  D     EE FGPL P++  +  E   + I    +    LA YF+S D        
Sbjct: 378 CNVTQDMLCTHEETFGPLAPVIKFDTEE---EAIAIANAADVGLAGYFYSQDPAQIWRVA 434

Query: 441 EQMKKEFVQNISAGGIV-FNDTIVHTTVSSLPFGGVGESGMG---SYHG 485
           EQ+  E        G+V  N+ ++ +     PFGGV +SG+G   S +G
Sbjct: 435 EQL--EV-------GMVGVNEGLISSVEC--PFGGVKQSGLGREGSKYG 472

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score =  145 bits (369), Expect = 2e-38
 Identities = 98/355 (27%), Positives = 164/355 (46%), Gaps = 39/355 (10%)

Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
           +I +P+GV   I+ WN+P  +       A+AAG  +VLKP+   P ++  LA+L     V
Sbjct: 141 VIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGV 200

Query: 224 DNSAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
                 VV G+       L       K+ +TGS  +GR +M   AK +  V LELGG +P
Sbjct: 201 PAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 260

Query: 282 AVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
            +V  D+ ++  V     +A K   N GQ C+  + +        +  + L+  + +   
Sbjct: 261 FIVFDDADLDKAVEG--ALASK-FRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHI 317

Query: 340 KNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEK-QLKIAPTILLDVP 395
            + +++   +  +++    A++   +  D +    ++V GG+  E+      PTIL+DVP
Sbjct: 318 GDGLDNGVTIGPLIDEKAVAKVEEHIA-DALEKGARVVCGGKAHERGGNFFQPTILVDVP 376

Query: 396 DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKPLAAYFFSDD--------EQMK 444
            ++ + KEE FGPL P+   +      DVI         LAAYF++ D        E + 
Sbjct: 377 ANAKVSKEETFGPLAPLFRFKDEA---DVIAQANDTEFGLAAYFYARDLSRVFRVGEAL- 432

Query: 445 KEFVQNISAGGIV-FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
            E+       GIV  N  I+   V+  PFGG+  SG+G    K+  + +   K +
Sbjct: 433 -EY-------GIVGINTGIISNEVA--PFGGIKASGLGREGSKYGIEDYLEIKYM 477

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score =  146 bits (370), Expect = 3e-38
 Identities = 89/356 (25%), Positives = 147/356 (41%), Gaps = 40/356 (11%)

Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
           +   P+GV  +I  WN+P  +    +  A+AAG   V+KP+   P T      +++   +
Sbjct: 143 VHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDL 202

Query: 224 DNSAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
            +  V +V G  +    +L +  D   + +TGS  VGR ++   A+ +  + LELGG +P
Sbjct: 203 PDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAP 262

Query: 282 AVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
            +V  D+ +        +IA K     GQ C+  + I   +  A      L   + +   
Sbjct: 263 FIVFDDADLEAAADN--LIANK-FRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTV 319

Query: 340 KNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDE--KQLKIAPTILLDV 394
            + M    D+  ++N   F ++   L  D +     +V G Q  E    L   PT++  V
Sbjct: 320 GDGMNDGIDIGPLINKQGFDKVKRHLQ-DALDKGASLVAGKQPAELGDGLFFPPTVVQGV 378

Query: 395 PDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKPLAAYFFSDD--------EQM 443
             +    +EE FGPL+P+      E   +VI         LA+Y F+ D          +
Sbjct: 379 DREMCCYQEETFGPLVPMALFRTEE---EVIDAGNDTEFGLASYVFTADAERAQRVAAGL 435

Query: 444 KKEFVQNISAGGIV-FNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAV 498
              F       G V +N     T  +  PFGG+  SG+G   G      F   + V
Sbjct: 436 --RF-------GHVGWNTGTGPTPEA--PFGGMKASGIGREGGLEGLFEFVEAQTV 480

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score =  145 bits (368), Expect = 4e-38
 Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 42/345 (12%)

Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
           ++ EP+GV   I+ WN+P  +    V  A+AAG  +V+KP+E  P ++  +A L E   V
Sbjct: 144 VVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGV 203

Query: 224 DNSAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
               + VV G        +       K+ +TGS  VGR++MA +A  +  + LELGG +P
Sbjct: 204 PKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAP 263

Query: 282 AVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
            +V  D+ ++  V     IA K   NNGQ C+  +     +       D L   + +   
Sbjct: 264 FIVFDDADLDAAVEG--AIASK-YRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKV 320

Query: 340 KNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEK-QLKIAPTILLDVP 395
               ES   L  ++N     ++ S +  D ++    ++ GG+R         PT+L  V 
Sbjct: 321 GRGTESGATLGPLINEAAVKKVESHIA-DALAKGASLMTGGKRHALGHGFFEPTVLTGVK 379

Query: 396 DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKPLAAYFFSDD--------EQMK 444
            D  + KEE FGPL P+      E   ++++        LAAY +S D        E + 
Sbjct: 380 PDMDVAKEETFGPLAPLFRFASEE---ELVRLANDTEFGLAAYLYSRDIGRVWRVAEAL- 435

Query: 445 KEFVQNISAGGIV-FNDTIVHTTVSSLPFGGVGESGMG---SYHG 485
            E+       G+V  N  ++   V+  PFGGV +SG+G   S++G
Sbjct: 436 -EY-------GMVGINTGLISNEVA--PFGGVKQSGLGREGSHYG 470

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score =  145 bits (369), Expect = 5e-38
 Identities = 76/418 (18%), Positives = 134/418 (32%), Gaps = 50/418 (11%)

Query: 98  IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLT 157
           IA+ IE + E I E   ++   P       E   T    +L    ++        +    
Sbjct: 94  IADEIEARAEAITEIGSQETGLPEARL-NGERGRTTGQLRLFADHIE--KGDYLDRRVDA 150

Query: 158 TYPSSA-------EIISEPLGVVLVISTWNYPFLLSLDPVIG-----AIAAGNAVVLKPS 205
             P           ++  P+G V V    N+P   S     G     A+AAG  VV+K  
Sbjct: 151 AMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFS---TAGGDTAAALAAGCPVVVKGH 207

Query: 206 EIAPATSSLLAKLLEDYVDNS-----AVRVVEGAVAETSALLEQ--KWDKILYTGSPRVG 258
              P T  ++A+ ++  +  +        +++G   +    L Q      + +TGS   G
Sbjct: 208 SAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGG 267

Query: 259 RIVMAAAAKHLTPV--ILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACI--G 312
           R +    A    P+    ELG  +P  +  ++      T  +  AG      GQ C   G
Sbjct: 268 RALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPG 327

Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
           +  +I   D   +   +    L +   +  +                 A     + V  K
Sbjct: 328 IAVVIEGADA-DRFTTAAVEALAKVAPQTMLTDGIAKAYR-----DGQARFATRNAV--K 379

Query: 373 IVYGGQRDEKQLKIAPTILLDVPDD---STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP 429
            +   +   +    +P +             + EE+FGPL  +V V    +  ++ +   
Sbjct: 380 PLLATESSGRDA--SPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQ 437

Query: 430 KPLAAYFFSDDEQMKK----EFVQNISAGGIVFNDTIVHTTVSSL--PFGGVGESGMG 481
             L A    D   ++       V    AG ++ N       V       G    S   
Sbjct: 438 GQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNF 495

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score =  144 bits (366), Expect = 9e-38
 Identities = 97/344 (28%), Positives = 162/344 (47%), Gaps = 42/344 (12%)

Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
           +I +P+GV   I+ WN+P  +       A+AAG  ++++P+++ P T+  L  L E   +
Sbjct: 164 VIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGI 223

Query: 224 DNSAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
               +++V G   E  A L       K+ +TGS  VGR++MA  A  +  + LELGG +P
Sbjct: 224 PAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAP 283

Query: 282 AVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
            +V  D+ ++  V     +  K   N GQ C+  + I   +    K  + L  ++KE   
Sbjct: 284 FIVFDDADLDAAVDG--AMVSK-YRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKV 340

Query: 340 KNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPD 396
            N  E    +  ++      ++ + ++ D VS   K++ GG+         P IL  V  
Sbjct: 341 GNGTEPGVVIGPMIEEKAITKVKAHIE-DAVSKGAKLITGGKELGGLF-FEPGILTGVTS 398

Query: 397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIK---SKPKPLAAYFFSDD--------EQMKK 445
           D  + KEE FGPL P+   +  E   +VI         LAAYF++++        E +  
Sbjct: 399 DMLVAKEETFGPLAPLFAFDTEE---EVIAQANDTIFGLAAYFYTENFSRAIRVSEAL-- 453

Query: 446 EFVQNISAGGIV-FNDTIVHTTVSSLPFGGVGESGMG---SYHG 485
           E+       G+V  N  ++   V+  PFGGV +SG+G   S +G
Sbjct: 454 EY-------GMVGHNTGLISNEVA--PFGGVKQSGLGREGSKYG 488

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score =  129 bits (326), Expect = 2e-32
 Identities = 92/360 (25%), Positives = 161/360 (44%), Gaps = 33/360 (9%)

Query: 168 EPLGVVLVISTWNYPFLLSL--DPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----- 220
            P+GVV  I+ +N+P ++     P+  AIA GN  +LKPSE  P  +  L +L E     
Sbjct: 140 YPIGVVGGIAPFNFPMMVPCWMFPM--AIALGNTFILKPSERTPLLTEKLVELFEKAGLP 197

Query: 221 DYVDNSAVRVVEGAVAETSALLEQKWDK-ILYTGSPRVGRIVMAAAAKHLTPVILELGGK 279
             V N    VV GA    + +LE    K I + GS  VG  V    +++L  V    G K
Sbjct: 198 KGVFN----VVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAK 253

Query: 280 SPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF-F 338
           +  +V +  NL+ T   I+   + +  G+ C+    +   +  A + +  L+ ++ +   
Sbjct: 254 NHTIVLNDANLEDTVTNIVGAAFGSA-GERCMACAVVTVEEGIADEFMAKLQEKVADIKI 312

Query: 339 GKNPMESKDLSRIVNPFHFARLASLLD--EDKVSDKIVYG-GQRDEKQLKIAPTILLDVP 395
           G    +   L  ++   +  R  S ++   ++ +  +  G     +    + PTI  +V 
Sbjct: 313 GNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVT 372

Query: 396 DDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGG 455
            + TI K+EIF P+L ++ V+ ++++ ++         A  F+ +    + F +NI AG 
Sbjct: 373 TEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGM 432

Query: 456 IVFNDTI-VHTTVSSLPFGGVGESGMG--SYHGKFSFDAFSHKKAVLYRSFNGDSTTRYP 512
           +  N  +     ++  PF G   S  G    +GK S D ++ KK V         T RYP
Sbjct: 433 LGINLGVPA--PMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVV---------TARYP 481

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score =  126 bits (320), Expect = 2e-31
 Identities = 74/344 (21%), Positives = 125/344 (36%), Gaps = 41/344 (11%)

Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED------ 221
              G V  IS +N+   +  +        GN V+ KPS+ A   S  + ++L +      
Sbjct: 199 GLEGFVAAISPFNFT-AIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPN 257

Query: 222 ---YVDNSAVRVVEGAVA--ETSALLEQKWDKILYTGSPRVGRIVMAAAA------KHLT 270
              +V        +   +              I +TGS    + +    A      +   
Sbjct: 258 IIQFVPADGPTFGDTVTSSEHLCG--------INFTGSVPTFKHLWRQVAQNLDRFRTFP 309

Query: 271 PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330
            +  E GGK+   V S+ ++       +   +    GQ C     +   K   P++   L
Sbjct: 310 RLAGECGGKNFHFVHSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQIKGRL 368

Query: 331 RNELKEFFGKNPMESKDLSRIVNP----FHFARLASLLDEDKVSDK--IVYGGQRDEKQ- 383
             E       +P E  D     +       FAR+   L+  + S    I+ GGQ +E   
Sbjct: 369 LEEHSRIKVGDPAE--DFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVG 426

Query: 384 LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVE--KIEDSFDVI-KSKPKPLAAYFFSDD 440
             + P I+        IMKEEIFGP+L +      K  ++  ++  +    L    F+ D
Sbjct: 427 YYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQD 486

Query: 441 EQMKKEFVQNI--SAGGIVFNDTIVHTTVSSLPFGGVGESGMGS 482
           + + +E  + +  +AG    ND    + V   PFGG   SG   
Sbjct: 487 KAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTND 530

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score =  118 bits (298), Expect = 1e-28
 Identities = 88/369 (23%), Positives = 148/369 (40%), Gaps = 47/369 (12%)

Query: 168 EPLGVVLVISTWNYPFLLSL--DPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----- 220
           +P+G+   I+ +N+P ++ +       AIA GNA +LKPSE  P+    LA+L+      
Sbjct: 161 QPVGIGAGITPFNFPGMIPMWMFAP--AIACGNAFILKPSERDPSVPIRLAELMIEAGLP 218

Query: 221 DYVDNSAVRVVEGAVAETSALLEQKWDK-ILYTGSPRVGRIVMAAAAKHLTPVILELGGK 279
             + N    VV G      A+L       + + GS  + R V   AA +        G K
Sbjct: 219 AGILN----VVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAK 274

Query: 280 SPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII-----TTKDFAPKLIDSLRNEL 334
           +  ++    +L      +I G    + G+ C+ +   +     T      KL+  + + L
Sbjct: 275 NHMIIMPDADLDQAANALI-GAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVES-L 332

Query: 335 KEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLK------I 386
           +     +     D+  +V      R+ SL+D   +    K+V  G RD K         I
Sbjct: 333 RIGPYTDE--KADMGPVVTKEAEQRIRSLIDSG-IEQGAKLVVDG-RDFKLQGYENGHFI 388

Query: 387 APTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKE 446
              +  DV  D  I K EIFGP+L +V     E++  +            ++ D    ++
Sbjct: 389 GGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARD 448

Query: 447 FVQNISAGGIVFNDTI-VHTTVSSLPFGGVGESGMG--SYHGKFSFDAFSHKKAVLYRSF 503
           F   I+ G +  N  I V   ++   FGG   S  G  + HG  S   ++  K +     
Sbjct: 449 FASRINIGMVGVNVPIPV--PLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTI----- 501

Query: 504 NGDSTTRYP 512
               T+R+P
Sbjct: 502 ----TSRWP 506

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 64.9 bits (157), Expect = 4e-11
 Identities = 89/592 (15%), Positives = 177/592 (29%), Gaps = 190/592 (32%)

Query: 1   MRNPSVRAFQDFSTGAACLNKS---FIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAE 57
           + N   +  QD       L+K     I       + T      L    F    S     +
Sbjct: 30  VDNFDCKDVQDMPKSI--LSKEEIDHIIMSKDAVSGTL----RL----FWTLLSK----Q 75

Query: 58  EKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN---MIEEKEEEIIEAIH 114
           E+ +Q+F VE+       LR NY        ++ MS I++      M+     E  + ++
Sbjct: 76  EEMVQKF-VEEV------LRINY--------KFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120

Query: 115 KDLSKPPF-ETFISEISMTKSSCKLALKELKYWTKPEK----------AKTSLTTYPSSA 163
            D     F +  +S +       + AL EL    +P K           KT +       
Sbjct: 121 ND--NQVFAKYNVSRLQP-YLKLRQALLEL----RPAKNVLIDGVLGSGKTWVA-----L 168

Query: 164 EIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYV 223
           ++              +Y     +D  I  +   N     P  +      LL ++  ++ 
Sbjct: 169 DVCL------------SYKVQCKMDFKIFWLNLKN--CNSPETVLEMLQKLLYQIDPNWT 214

Query: 224 DNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKH-LTPVIL-ELGGKSP 281
             S          + S+ ++ +   I       + R++ +   ++ L  ++L  +  ++ 
Sbjct: 215 SRS----------DHSSNIKLRIHSI----QAELRRLLKSKPYENCL--LVLLNV--QNA 256

Query: 282 AVVDSTINLQ----VTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN----E 333
              ++  NL     +TTR               +  D++         L          E
Sbjct: 257 KAWNA-FNLSCKILLTTR------------FKQV-TDFLSAATTTHISLDHHSMTLTPDE 302

Query: 334 LKEFFGKN-PMESKDLSR---IVNPFHFARLASLLDE-------------DKVSDKIVYG 376
           +K    K      +DL R     NP   + +A  + +             DK++  I   
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII--- 359

Query: 377 GQRDEKQLKIAPTIL------LDV-PDDSTIMKE--EIFGPLLPIVTVEKIEDSFD---V 424
            +     L+  P         L V P  + I      +    +    V  + +      +
Sbjct: 360 -ESSLNVLE--PAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL 416

Query: 425 IKSKPKPLAAYFFS--DDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGS 482
           ++ +PK       S   + ++K E            N+  +H ++            +  
Sbjct: 417 VEKQPKESTISIPSIYLELKVKLE------------NEYALHRSI------------VDH 452

Query: 483 Y--HGKFSFDAFSHKKAVLYRSFNGDSTTRYPPY------TAEKQKLLRALF 526
           Y     F  D         Y  ++      +  +        E+  L R +F
Sbjct: 453 YNIPKTFDSDDLIPPYLDQY-FYS------HIGHHLKNIEHPERMTLFRMVF 497

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	543
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	100.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	100.0
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	100.0
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	100.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	100.0
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	100.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	100.0
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	100.0
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	100.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	100.0
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	100.0
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	100.0
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	100.0
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	100.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	100.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	100.0
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	100.0
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	100.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	100.0
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	100.0
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	100.0
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	100.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	100.0
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	100.0
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	100.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	100.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	100.0
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	100.0
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	100.0
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	100.0
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	100.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	100.0
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	100.0
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	100.0
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	100.0
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	100.0
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	100.0
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	100.0
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	100.0
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	100.0
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	100.0
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	100.0
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	100.0
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	100.0
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	100.0
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	100.0
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	100.0
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	100.0
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	100.0
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	100.0
4gic_A	423	HDH, histidinol dehydrogenase; protein structure i	97.38
1kae_A	434	HDH, histidinol dehydrogenase; L-histidinol dehydr	96.3

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=100.00  E-value=6.6e-108  Score=869.70  Aligned_cols=467  Identities=24%  Similarity=0.346  Sum_probs=437.0

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI   98 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~   98 (543)
                      +.|||||| +|+++.+|++++++        ||+||++++++ +.++.+|+++||++|++||+.|+++|+.+|.++|+++
T Consensus         6 ~~kl~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~v-~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~   75 (490)
T 2wme_A            6 EQKLYIGG-RYVEASSGATFETI--------NPANGEVLAKV-QRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRA   75 (490)
T ss_dssp             CBCEECSS-SEECCSSSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred             CCcEEECC-eeeCCCCCCEEEee--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence            47899999 99999999999988        88899999766 9999999999999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST  178 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p  178 (543)
                      +++|++|+++|++++++|+|||+.+++..|+..+++.++++++..+++.... .   +...+...+++++|+|||++|+|
T Consensus        76 a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~-~---~~~~~~~~~~~~~P~GVv~~I~P  151 (490)
T 2wme_A           76 VDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQ-I---PLRETSFVYTRREPLGVVAGIGA  151 (490)
T ss_dssp             HHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEE-E---EEETTEEEEEEEEECSEEEEECC
T ss_pred             HHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcc-c---cccCCcceeEEecceeEEEEecc
Confidence            9999999999999999999999999986679999999999999887643321 1   12234567889999999999999


Q ss_pred             CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCCh
Q 009109          179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP  255 (543)
Q Consensus       179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~  255 (543)
                      ||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.++++.|++|+ ||+|+||||+
T Consensus       152 wNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~  231 (490)
T 2wme_A          152 WNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGT  231 (490)
T ss_dssp             SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCH
T ss_pred             ccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECCh
Confidence            99999999999999999999999999999999999999999999 99999999999 678999999997 9999999999


Q ss_pred             HHHHHHHH-HHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH
Q 009109          256 RVGRIVMA-AAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL  334 (543)
Q Consensus       256 ~~g~~i~~-~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~  334 (543)
                      .+|+.+++ .+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++
T Consensus       232 ~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~  310 (490)
T 2wme_A          232 STGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERV  310 (490)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHh-ccCCCcCCCceeeccchhHHHHHHHHHHHHH
Confidence            99998876 556789999999999999999999999999999999999 9999999999999999999999999999999


Q ss_pred             HhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCCCCccccccccc
Q 009109          335 KEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFG  407 (543)
Q Consensus       335 ~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fg  407 (543)
                      +++++|||.+ ++++||++++.+++++.++|+++.. ++++++||...     .+|+|++|||+.+++++|++++||+||
T Consensus       311 ~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFG  390 (490)
T 2wme_A          311 QRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFG  390 (490)
T ss_dssp             HTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCS
T ss_pred             HhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccC
Confidence            9999999987 7799999999999999999999875 67999999763     258999999999999999999999999


Q ss_pred             ceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHH
Q 009109          408 PLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF  487 (543)
Q Consensus       408 Pvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~  487 (543)
                      ||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+
T Consensus       391 PVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PFGG~k~SG~Gre~G~~  468 (490)
T 2wme_A          391 PVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLT  468 (490)
T ss_dssp             SEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHH
T ss_pred             CEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCC--CCCCCCcccccccccCchhHHH
Confidence            99999999999999999999999999999999999999999999999999998653  5678999999999999999999


Q ss_pred             HHHHhhhceEEEEec
Q 009109          488 SFDAFSHKKAVLYRS  502 (543)
Q Consensus       488 ~~~~~~~~k~v~~~~  502 (543)
                      |+++||+.|+|+++.
T Consensus       469 gl~~ft~~K~v~i~~  483 (490)
T 2wme_A          469 TLAHYTRIKSVQVEL  483 (490)
T ss_dssp             HHHTTEEEEEEEEEC
T ss_pred             HHHHhhceeEEEEEC
Confidence            999999999999875

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=100.00  E-value=5.5e-103  Score=837.85  Aligned_cols=470  Identities=27%  Similarity=0.391  Sum_probs=439.6

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh-----hhcCCCHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN-----SRKTKSYEWRMS   93 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~-----~w~~~~~~~R~~   93 (543)
                      ..++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||+     .|+.++..+|.+
T Consensus         7 ~~~~~i~g-~~~~~~~~~~~~~~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~   76 (503)
T 3iwj_A            7 TRQLFING-DWKAPVLNKRIPVI--------NPATQNIIGDI-PAATKEDVDVAVAAAKTALTRNKGADWATASGAVRAR   76 (503)
T ss_dssp             CCCEEETT-EEECCTTCCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHH
T ss_pred             CCceeECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHH
Confidence            36799999 99999888888887        88899999766 99999999999999999999     999999999999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEE
Q 009109           94 QIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV  173 (543)
Q Consensus        94 iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  173 (543)
                      +|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..++++.+...........+...+++++|+|||
T Consensus        77 ~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  155 (503)
T 3iwj_A           77 YLRAIAAKVTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVV  155 (503)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceE
Confidence            999999999999999999999999999999975 9999999999999998887654322111112345678999999999


Q ss_pred             EEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEE
Q 009109          174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKIL  250 (543)
Q Consensus       174 ~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~  250 (543)
                      ++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+
T Consensus       156 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~  235 (503)
T 3iwj_A          156 GLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVA  235 (503)
T ss_dssp             EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEE
T ss_pred             EEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEE
Confidence            9999999999999999999999999999999999999999999999999 99999999999 567899999996 99999


Q ss_pred             EeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHH
Q 009109          251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL  330 (543)
Q Consensus       251 ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l  330 (543)
                      ||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|
T Consensus       236 FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l  314 (503)
T 3iwj_A          236 FTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCF-WTNGQICSATSRLILHESIATEFLNRI  314 (503)
T ss_dssp             EESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHT-GGGGCCTTCEEEEEEETTTHHHHHHHH
T ss_pred             EECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCCcccCCeeEEcHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999 999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC---CCCceeeceEeeCCCCCCccccccc
Q 009109          331 RNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD---EKQLKIAPTILLDVPDDSTIMKEEI  405 (543)
Q Consensus       331 ~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~  405 (543)
                      +++++++++|||.+ ++++||++++.+++++.++++++.+ ++++++||...   ..|+|++|||+.+++++|++++||+
T Consensus       315 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEi  394 (503)
T 3iwj_A          315 VKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEV  394 (503)
T ss_dssp             HHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCC
T ss_pred             HHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCcee
Confidence            99999999999987 6799999999999999999999875 67999999764   4799999999999999999999999


Q ss_pred             ccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcch
Q 009109          406 FGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG  485 (543)
Q Consensus       406 fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g  485 (543)
                      ||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|
T Consensus       395 FGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G  472 (503)
T 3iwj_A          395 FGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQP--CFTQAPWGGVKRSGFGRELG  472 (503)
T ss_dssp             CSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCC--CCTTSCBCCSGGGEECCBSH
T ss_pred             eCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCC--CCCCCCcCCcCcccCCCcch
Confidence            9999999999999999999999999999999999999999999999999999998753  56889999999999999999


Q ss_pred             HHHHHHhhhceEEEEec
Q 009109          486 KFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       486 ~~~~~~~~~~k~v~~~~  502 (543)
                      .+|+++|++.|+|+++.
T Consensus       473 ~~g~~~f~~~k~v~~~~  489 (503)
T 3iwj_A          473 EWGLDNYLSVKQVTQYI  489 (503)
T ss_dssp             HHHHHTTEEEEEEEEEC
T ss_pred             HHHHHHhhCeEEEEEeC
Confidence            99999999999998875

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=100.00  E-value=4.8e-103  Score=835.74  Aligned_cols=478  Identities=20%  Similarity=0.312  Sum_probs=437.2

Q ss_pred             cchhhhhhcccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcC
Q 009109            6 VRAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKT   85 (543)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~   85 (543)
                      .+.|+-.+.++. ..++|||| +|+.+.++ +++++        ||.||++++.+ +.++.+|+++|+++|++||+.|+.
T Consensus        13 ~~~~~~~~~~~~-~~~~~I~G-~~~~~~~~-~~~v~--------nP~tg~~i~~v-~~~~~~dv~~Av~aA~~A~~~w~~   80 (498)
T 4f3x_A           13 LGTENLYFQSMM-DTQLLIGS-RFEAGTEA-EEHIL--------NPRTGAGIIDL-AEASHAQIDAAVDAAERAFVGWSQ   80 (498)
T ss_dssp             ----------CC-CCCEEETT-EEECCCSC-EEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCccchhhhhcc-ccCeeECC-EEeeCCCC-eEEEE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhcc
Confidence            345555555553 35899999 99998777 88888        88899999766 999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceE
Q 009109           86 KSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEI  165 (543)
Q Consensus        86 ~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (543)
                      +++.+|.++|++++++|+++.++|++++++|+|||..++...|+..+++.++++++.++++.... ..  ....+...++
T Consensus        81 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~-~~--~~~~~~~~~~  157 (498)
T 4f3x_A           81 TTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPA-AG--EYLPGHTSMI  157 (498)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEEC-BE--EEETTEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCcc-cc--CCcccccceE
Confidence            99999999999999999999999999999999999999933699999999999999887754322 11  1123456789


Q ss_pred             EeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeecC-ChHHHHHHHhC
Q 009109          166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQ  244 (543)
Q Consensus       166 ~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~g-~~~~~~~L~~~  244 (543)
                      +++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.+++|+|+||+|+| +.+.+++|++|
T Consensus       158 ~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~  237 (498)
T 4f3x_A          158 RRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADILPEGVVNVITGRGETVGNALINH  237 (498)
T ss_dssp             EEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTTSCTTSEEECCCCTTTHHHHHHTC
T ss_pred             EEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHhCCcCeEEEEeCCchHHHHHHHhC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999 66799999999


Q ss_pred             C-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcH
Q 009109          245 K-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFA  323 (543)
Q Consensus       245 ~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~  323 (543)
                      + ||+|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|
T Consensus       238 p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~  316 (498)
T 4f3x_A          238 PKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGY-YNAGQDCTAACRIYAEAGIY  316 (498)
T ss_dssp             TTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCEEEEEEETTTH
T ss_pred             CCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHH-hcCCCCccCCceEEecHHHH
Confidence            6 999999999999999999999999999999999999999999999999999999999 99999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CC-EEEECcccC-CCCceeeceEeeCCCCCCc
Q 009109          324 PKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SD-KIVYGGQRD-EKQLKIAPTILLDVPDDST  399 (543)
Q Consensus       324 ~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~-~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~  399 (543)
                      |+|+++|+++++++++|||.+ ++++||++++.+++++.++++++.+ ++ ++++||... ..|+|++|||+.+++++|+
T Consensus       317 d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~  396 (498)
T 4f3x_A          317 EKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDE  396 (498)
T ss_dssp             HHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSH
T ss_pred             HHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCCh
Confidence            999999999999999999976 6799999999999999999999865 67 999999763 4799999999999999999


Q ss_pred             ccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCC
Q 009109          400 IMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESG  479 (543)
Q Consensus       400 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG  479 (543)
                      +++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++.+  .+.+||||+|.||
T Consensus       397 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG  474 (498)
T 4f3x_A          397 IVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFML--TNEMPHGGIKQSG  474 (498)
T ss_dssp             HHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC--CTTSCBCCSGGGE
T ss_pred             hhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCC--CCCCCcCCcCcCC
Confidence            99999999999999999999999999999999999999999999999999999999999998764  4899999999999


Q ss_pred             CCCcchHHHHHHhhhceEEEEe
Q 009109          480 MGSYHGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       480 ~G~~~g~~~~~~~~~~k~v~~~  501 (543)
                      +|+++|.+++++|++.|+|+++
T Consensus       475 ~Gr~~G~~~l~~~t~~k~v~~~  496 (498)
T 4f3x_A          475 YGKDMSVYALEDYTAVRHIMIN  496 (498)
T ss_dssp             ECCBSHHHHHHHTEEEEEEEEE
T ss_pred             cCccchHHHHHHhhceEEEEEe
Confidence            9999999999999999999874

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=100.00  E-value=8.6e-103  Score=834.46  Aligned_cols=467  Identities=22%  Similarity=0.331  Sum_probs=438.9

Q ss_pred             cccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 009109           18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS   97 (543)
Q Consensus        18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~   97 (543)
                      ...++|||| +|+.+.++++++++        ||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++
T Consensus        10 ~~~~~~I~G-~~~~~~~~~~~~v~--------~P~tg~~i~~v-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~   79 (506)
T 3rh9_A           10 ENLTGYIGG-RWKDSAGGATFDVY--------NPATGSVIAKV-PSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLED   79 (506)
T ss_dssp             SCCSEEETT-EEECCCTTCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHH
T ss_pred             cccCeeECC-EEeeCCCCCEEEEE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence            346899999 99999888888888        88899999765 999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEe-ecceEEEEE
Q 009109           98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIIS-EPLGVVLVI  176 (543)
Q Consensus        98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i  176 (543)
                      ++++|++++++|++++++|+|||..+++ .|+..+++.++++++.++++.+.. .+.   ..+...++++ +|+|||++|
T Consensus        80 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~~P~GVV~~I  154 (506)
T 3rh9_A           80 IRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHT-IPE---KPKDCTWTVHYRPVGVTGLI  154 (506)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEE-CSC---CGGGCEEEEEEEECCSEEEE
T ss_pred             HHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-ccc---CCCceeeEeecccceEEEEE
Confidence            9999999999999999999999999998 599999999999999999875432 111   1344678888 999999999


Q ss_pred             cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109          177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      +|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.+++|++|+ ||+|+|||
T Consensus       155 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTG  234 (506)
T 3rh9_A          155 VPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTG  234 (506)
T ss_dssp             CCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEES
T ss_pred             CCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEEC
Confidence            9999999999999999999999999999999999999999999999 99999999999 668899999997 99999999


Q ss_pred             ChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHH
Q 009109          254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE  333 (543)
Q Consensus       254 S~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~  333 (543)
                      |+++|+.|++++++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++
T Consensus       235 S~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~  313 (506)
T 3rh9_A          235 STEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKF-RGGGQTCVCANRIFVHEKVADAFGQKLAER  313 (506)
T ss_dssp             CHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSSSSCCEEEEETTTHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-HhCCCCcccCcEEEEcHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999 999999999999999999999999999999


Q ss_pred             HHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CC-CCceeeceEeeCCCCCCcccccccccce
Q 009109          334 LKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DE-KQLKIAPTILLDVPDDSTIMKEEIFGPL  409 (543)
Q Consensus       334 ~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPv  409 (543)
                      ++++++|||.+ ++++||++++.+++++.++++++.+ ++++++||.. +. .|+|++|||+.+++++|++++||+||||
T Consensus       314 ~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV  393 (506)
T 3rh9_A          314 VNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPL  393 (506)
T ss_dssp             HHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSE
T ss_pred             HHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcE
Confidence            99999999987 6799999999999999999999875 6799999975 33 7999999999999999999999999999


Q ss_pred             eeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHH
Q 009109          410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF  489 (543)
Q Consensus       410 l~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~  489 (543)
                      ++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++.  ..+.+||||+|.||+|+++|.+|+
T Consensus       394 l~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl  471 (506)
T 3rh9_A          394 VPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTG--PTPEAPFGGMKASGIGREGGLEGL  471 (506)
T ss_dssp             EEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHH
T ss_pred             EEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCC--CCCCCCccCcCcCcCCcCccHHHH
Confidence            999999999999999999999999999999999999999999999999999875  457899999999999999999999


Q ss_pred             HHhhhceEEEEec
Q 009109          490 DAFSHKKAVLYRS  502 (543)
Q Consensus       490 ~~~~~~k~v~~~~  502 (543)
                      ++|++.|+|+++.
T Consensus       472 ~~ft~~K~v~~~~  484 (506)
T 3rh9_A          472 FEFVEAQTVPRGF  484 (506)
T ss_dssp             TTTEEEEEEEEC-
T ss_pred             HHhcceEEEEEcC
Confidence            9999999998864

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=100.00  E-value=5.7e-103  Score=833.11  Aligned_cols=465  Identities=23%  Similarity=0.354  Sum_probs=434.9

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI   98 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~   98 (543)
                      ..++|||| +|+.+.++++++++        ||.||++++++ +.++.+|+++|+++|++||+.|+.++..+|.++|+++
T Consensus        12 ~~~~~I~G-~~~~~~~~~~~~v~--------~P~tg~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~   81 (484)
T 3ifg_A           12 RHQAYIGG-EWQAADSDATFEVF--------DPATGESLGTV-PKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRW   81 (484)
T ss_dssp             CCSEEETT-EEECCTTCCEEEEE--------CTTTCCEEEEE-ECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred             ccceeECC-EEeeCCCCCEEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence            46799999 99998888888888        88899999766 9999999999999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST  178 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p  178 (543)
                      +++|++++++|++++++|+|||..+++. |+..+++.+++++...+++.... .  .....+...+++++|+|||++|+|
T Consensus        82 a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~-~--~~~~~~~~~~~~~~P~GVv~~I~P  157 (484)
T 3ifg_A           82 FDLVIANSDDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDT-L--PTPDANKRIVVVKEPIGVCAAITP  157 (484)
T ss_dssp             HHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEE-E--CCSSTTEEEEEEEEECSSEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCcc-c--cccCCCceeEEEecCCcEEEEECC
Confidence            9999999999999999999999999985 99999999999998776643211 1  111134567899999999999999


Q ss_pred             CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCCh
Q 009109          179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP  255 (543)
Q Consensus       179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~  255 (543)
                      ||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+
T Consensus       158 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~  237 (484)
T 3ifg_A          158 WNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGST  237 (484)
T ss_dssp             SSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCH
T ss_pred             CcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCH
Confidence            99999999999999999999999999999999999999999999 99999999999 567899999996 9999999999


Q ss_pred             HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109          256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK  335 (543)
Q Consensus       256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~  335 (543)
                      ++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++
T Consensus       238 ~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~  316 (484)
T 3ifg_A          238 AVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKY-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVS  316 (484)
T ss_dssp             HHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCcccCCCeEEEcHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999 99999999999999999999999999999999


Q ss_pred             hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccceeee
Q 009109          336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI  412 (543)
Q Consensus       336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v  412 (543)
                      ++++|||.+ ++++||++++.+++++.++++++.+ ++++++||... ..|+|++|||+.+++++|++++||+||||++|
T Consensus       317 ~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v  396 (484)
T 3ifg_A          317 KLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPL  396 (484)
T ss_dssp             TCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEE
T ss_pred             hccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEE
Confidence            999999986 6799999999999999999999875 67999999764 37999999999999999999999999999999


Q ss_pred             eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHh
Q 009109          413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF  492 (543)
Q Consensus       413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~  492 (543)
                      ++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+..  ...+.+||||+|.||+|+++|.+|+++|
T Consensus       397 ~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~--~~~~~~PfGG~k~SG~Gr~~g~~gl~~~  474 (484)
T 3ifg_A          397 FRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGL--ISNEVAPFGGVKQSGLGREGSHYGIDDY  474 (484)
T ss_dssp             EEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSC--CCCSSSCBCCEETTEECCBSTTTTTGGG
T ss_pred             EEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCC--CCCCCCCcCCcCcCcCCCCchHHHHHHh
Confidence            99999999999999999999999999999999999999999999999864  3578999999999999999999999999


Q ss_pred             hhceEEEE
Q 009109          493 SHKKAVLY  500 (543)
Q Consensus       493 ~~~k~v~~  500 (543)
                      ++.|+|++
T Consensus       475 ~~~k~v~~  482 (484)
T 3ifg_A          475 VVIKYLCV  482 (484)
T ss_dssp             EEEEEEEE
T ss_pred             hceEEEEE
Confidence            99999876

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=100.00  E-value=2.5e-102  Score=833.49  Aligned_cols=467  Identities=22%  Similarity=0.355  Sum_probs=438.5

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHh--hhhcCCCHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNY--NSRKTKSYEWRMSQIQ   96 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~--~~w~~~~~~~R~~iL~   96 (543)
                      ..++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||  +.|+.++..+|.++|+
T Consensus        32 ~~~~~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~v-~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~  101 (520)
T 3ed6_A           32 SQRQYIDG-EWVESANKNTRDII--------NPYNQEVIFTV-SEGTKEDAERAILAARRAFESGEWSQETAETRGKKVR  101 (520)
T ss_dssp             CCSEEETT-EEECCTTCCEEEEE--------ETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHH
T ss_pred             CCceEECC-EEecCCCCCEEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHH
Confidence            45799999 99999888888888        88899999766 9999999999999999999  8999999999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109           97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI  176 (543)
Q Consensus        97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i  176 (543)
                      +++++|++++++|++++++|+|||+.+++. |+..+++.+++++..++++.+.. ..  ....+...+++++|+|||++|
T Consensus       102 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~-~~--~~~~~~~~~~~~~P~GVV~~I  177 (520)
T 3ed6_A          102 AIADKIKEHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEM-ID--SPIPDTESKIVKEPVGVVTQI  177 (520)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEE-EC--CSSTTEEEEEEEEECCEEEEE
T ss_pred             HHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCee-cc--cCCCCCcccccccCccEEEEE
Confidence            999999999999999999999999999985 99999999999999887754321 11  111345678999999999999


Q ss_pred             cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109          177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      +|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+|||
T Consensus       178 ~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTG  257 (520)
T 3ed6_A          178 TPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTG  257 (520)
T ss_dssp             CCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEES
T ss_pred             CCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEEC
Confidence            9999999999999999999999999999999999999999999999 99999999999 678999999996 99999999


Q ss_pred             ChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHH
Q 009109          254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE  333 (543)
Q Consensus       254 S~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~  333 (543)
                      |+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++
T Consensus       258 S~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~  336 (520)
T 3ed6_A          258 GIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDR  336 (520)
T ss_dssp             CHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGTSTTCCCEEEEEHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCcccCceEEEcHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999 999999999999999999999999999999


Q ss_pred             HHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCCCCcccccccc
Q 009109          334 LKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIF  406 (543)
Q Consensus       334 ~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~f  406 (543)
                      ++++++|||.+ .+++||++++.+++++.++++++.+ ++++++||...     ..|+|++|||+.+++++|++++||+|
T Consensus       337 ~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiF  416 (520)
T 3ed6_A          337 VKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVF  416 (520)
T ss_dssp             HTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCC
T ss_pred             HHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCcee
Confidence            99999999986 6799999999999999999999875 57999999764     46999999999999999999999999


Q ss_pred             cceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchH
Q 009109          407 GPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGK  486 (543)
Q Consensus       407 gPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~  486 (543)
                      |||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+  .+.+||||+|.||+|+++|.
T Consensus       417 GPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~  494 (520)
T 3ed6_A          417 GPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGK  494 (520)
T ss_dssp             SSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHH
T ss_pred             CcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCcCCccchH
Confidence            9999999999999999999999999999999999999999999999999999998763  68899999999999999999


Q ss_pred             HHHHHhhhceEEEEec
Q 009109          487 FSFDAFSHKKAVLYRS  502 (543)
Q Consensus       487 ~~~~~~~~~k~v~~~~  502 (543)
                      +|+++|++.|+|+++.
T Consensus       495 ~gl~~~t~~k~v~~~~  510 (520)
T 3ed6_A          495 EGLEEYLVSKHILTNT  510 (520)
T ss_dssp             HHHHTTEEEEEEEEES
T ss_pred             HHHHHhhceEEEEEcC
Confidence            9999999999998864

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=100.00  E-value=1.2e-102  Score=833.05  Aligned_cols=466  Identities=21%  Similarity=0.348  Sum_probs=435.4

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI   98 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~   98 (543)
                      ..++|||| +|+.+.++++++++        ||.||++++.+ +.++.+|+++|+++|++||+.|+.+++.+|.++|+++
T Consensus        32 ~~~~~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~v-~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~  101 (504)
T 3ek1_A           32 KSQCLVNG-RWIDAADGTTIKVT--------NPADGSVIGTV-PSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKW  101 (504)
T ss_dssp             CSSEEETT-EEECCTTCCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred             ccCeEECC-EEeeCCCCCEEEEE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHH
Confidence            35799999 99999888888888        88899999765 9999999999999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST  178 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p  178 (543)
                      +++|++++++|++++++|+|||..+++. |+..+++.+++++...+++.... .  .....+...+++++|+|||++|+|
T Consensus       102 a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~-~--~~~~~~~~~~~~~~P~GVV~~I~P  177 (504)
T 3ek1_A          102 FDLIIANADDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDT-I--PAPQNGQRLTVIRQPVGVTAAITP  177 (504)
T ss_dssp             HHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEE-E--CCSSTTEEEEEEEEECCEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcc-c--ccccccccceeeccCceEEEEECC
Confidence            9999999999999999999999999985 99999999999998776642211 1  111224567899999999999999


Q ss_pred             CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCCh
Q 009109          179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP  255 (543)
Q Consensus       179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~  255 (543)
                      ||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+
T Consensus       178 wN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~  257 (504)
T 3ek1_A          178 WNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGST  257 (504)
T ss_dssp             SSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCH
T ss_pred             CcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCH
Confidence            99999999999999999999999999999999999999999999 99999999998 567899999996 9999999999


Q ss_pred             HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109          256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK  335 (543)
Q Consensus       256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~  335 (543)
                      ++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++
T Consensus       258 ~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~  336 (504)
T 3ek1_A          258 EVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKY-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVK  336 (504)
T ss_dssp             HHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEehhHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999 99999999999999999999999999999999


Q ss_pred             hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeee
Q 009109          336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV  413 (543)
Q Consensus       336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~  413 (543)
                      ++++|||.+ ++++||++++.+++++.++++++.+ ++++++||.. ..|+|++|||+.+++++|++++||+||||++|+
T Consensus       337 ~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~  415 (504)
T 3ek1_A          337 ELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLF  415 (504)
T ss_dssp             TCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEE
T ss_pred             hcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEE
Confidence            999999986 6799999999999999999999875 6799999976 468999999999999999999999999999999


Q ss_pred             ccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhh
Q 009109          414 TVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS  493 (543)
Q Consensus       414 ~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~  493 (543)
                      +|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+...  ..+.+||||+|.||+|+++|.+|+++|+
T Consensus       416 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t  493 (504)
T 3ek1_A          416 AFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLI--SNEVAPFGGVKQSGLGREGSKYGIEEYL  493 (504)
T ss_dssp             EECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSTTTSGGGGE
T ss_pred             EeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCC--CCCCCCcCCcCcCcCCCCCcHHHHHHhh
Confidence            99999999999999999999999999999999999999999999998763  5688999999999999999999999999


Q ss_pred             hceEEEEec
Q 009109          494 HKKAVLYRS  502 (543)
Q Consensus       494 ~~k~v~~~~  502 (543)
                      +.|+|++..
T Consensus       494 ~~K~v~~~~  502 (504)
T 3ek1_A          494 ETKYICSAY  502 (504)
T ss_dssp             EEEEEEEEC
T ss_pred             ceEEEEEec
Confidence            999998753

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.7e-102  Score=831.62  Aligned_cols=468  Identities=24%  Similarity=0.368  Sum_probs=439.6

Q ss_pred             cccceeeecceecccCCcccccccccCccccccCCc-hhhhhhcccCCCHHHHHHHHHHHHHHh--hhhcCCCHHHHHHH
Q 009109           18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNY--NSRKTKSYEWRMSQ   94 (543)
Q Consensus        18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~a~~~dv~~av~aA~~A~--~~w~~~~~~~R~~i   94 (543)
                      ...++|||| +|+.+.++++++++        ||.| |++++.+ +.++.+|+++|+++|++||  ..|+.++..+|.++
T Consensus        21 ~~~~~~I~G-~~~~~~~~~~~~v~--------nP~t~g~~i~~~-~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~   90 (528)
T 3u4j_A           21 SRYQMLVDG-KSVDAASGSTIDRV--------SPGHAGEVVGTW-PEASADDVRKAVAAARKAFDAGPWPRMSGAERSRL   90 (528)
T ss_dssp             CBCCEEETT-EEECCTTCCEEEEE--------CTTSTTCEEEEE-ECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHH
T ss_pred             cccceeECC-EEecCCCCCEEEEe--------CCCCCCcEEEEE-eCCCHHHHHHHHHHHHHhccccccccCCHHHHHHH
Confidence            456899999 99999888888888        8889 9999766 9999999999999999999  88999999999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEE
Q 009109           95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVL  174 (543)
Q Consensus        95 L~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~  174 (543)
                      |++++++|++++++|++++++|+|||..++. .|+..+++.++++++.++++.... .+  ....+...+++++|+|||+
T Consensus        91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~-~~--~~~~~~~~~~~~~P~GVV~  166 (528)
T 3u4j_A           91 MFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQT-HN--NIGDDRLGLVLREPVGVVG  166 (528)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEE-EC--CSCTTEEEEEEEEECCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCee-ec--cCCCCceeEEEeccceEEE
Confidence            9999999999999999999999999999995 699999999999999988865321 11  1113456789999999999


Q ss_pred             EEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEE
Q 009109          175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILY  251 (543)
Q Consensus       175 ~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~f  251 (543)
                      +|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.+++|++|+ ||+|+|
T Consensus       167 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~F  246 (528)
T 3u4j_A          167 IITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAF  246 (528)
T ss_dssp             EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEE
T ss_pred             EECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEE
Confidence            999999999999999999999999999999999999999999999999 99999999999 778999999996 999999


Q ss_pred             eCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHH
Q 009109          252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR  331 (543)
Q Consensus       252 tGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~  331 (543)
                      |||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+
T Consensus       247 TGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~  325 (528)
T 3u4j_A          247 TGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALMERLL  325 (528)
T ss_dssp             ESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHh-hcCCCCCcCCCEEEEechHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC--CCceeeceEeeCCCCCCccccccccc
Q 009109          332 NELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE--KQLKIAPTILLDVPDDSTIMKEEIFG  407 (543)
Q Consensus       332 ~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fg  407 (543)
                      ++++++++|||.+ ++++||++++.+++++.++++++.+ |+++++||....  .|+|++|||+.+++++|++++||+||
T Consensus       326 ~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG  405 (528)
T 3u4j_A          326 DISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFG  405 (528)
T ss_dssp             HHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCS
T ss_pred             HHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeec
Confidence            9999999999987 6799999999999999999999875 679999997644  79999999999999999999999999


Q ss_pred             ceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHH
Q 009109          408 PLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF  487 (543)
Q Consensus       408 Pvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~  487 (543)
                      ||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+
T Consensus       406 PVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~  483 (528)
T 3u4j_A          406 PVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVID--GTPELPIGGYKKSGLGRELGRY  483 (528)
T ss_dssp             SEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSTTH
T ss_pred             cEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCcCCcCcCCCCcCchHH
Confidence            99999999999999999999999999999999999999999999999999999864  4789999999999999999999


Q ss_pred             HHHHhhhceEEEEec
Q 009109          488 SFDAFSHKKAVLYRS  502 (543)
Q Consensus       488 ~~~~~~~~k~v~~~~  502 (543)
                      |+++|++.|+|+++.
T Consensus       484 gl~~ft~~K~v~~~~  498 (528)
T 3u4j_A          484 GFDEYSQFKGVHVTL  498 (528)
T ss_dssp             HHHHTEEEEEEEEES
T ss_pred             HHHHhhceEEEEEeC
Confidence            999999999998865

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=100.00  E-value=1.1e-101  Score=824.97  Aligned_cols=465  Identities=22%  Similarity=0.330  Sum_probs=433.9

Q ss_pred             ccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHH
Q 009109           15 GAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQ   94 (543)
Q Consensus        15 ~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~i   94 (543)
                      +|....++|||| +|+.+.++++++++        ||+||++++.+ +.++.+|+++|+++|++||+.|+.+++.+|.++
T Consensus        21 ~m~~~~~~~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~v-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~   90 (497)
T 3i44_A           21 SMLNKRKFYING-LWDDPSTPHDLYVI--------DPSTEEACAVI-SLGSTRDADKAINAAKKAFQTWKTTSPHERLGF   90 (497)
T ss_dssp             -CEEECCEEETT-EEECCSSCCEEEEE--------ETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred             ccccccCeeECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHH
Confidence            555678999999 99999888888888        88899999765 999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEE-eecceEE
Q 009109           95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEII-SEPLGVV  173 (543)
Q Consensus        95 L~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv  173 (543)
                      |++++++|+++.++|++++++|+|||+.+++..|+..+++.++++++.+..+......     ..+...++. ++|+|||
T Consensus        91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~GVv  165 (497)
T 3i44_A           91 VEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-----IEGNEQAILHYDAIGVV  165 (497)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-----STTCSSCEEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-----cCCceeEEEeecCceEE
Confidence            9999999999999999999999999999998459999999999999988775432110     013456778 9999999


Q ss_pred             EEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEE
Q 009109          174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKIL  250 (543)
Q Consensus       174 ~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~  250 (543)
                      ++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||.|+
T Consensus       166 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~  245 (497)
T 3i44_A          166 GLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMIS  245 (497)
T ss_dssp             EEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEE
T ss_pred             EEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEE
Confidence            9999999999999999999999999999999999999999999999999 99999999999 678999999996 99999


Q ss_pred             EeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHH
Q 009109          251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL  330 (543)
Q Consensus       251 ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l  330 (543)
                      ||||+++|+.|++.+++++||+++|||||||+||++||| +.|++.+++++| .|+||.|++++|||||+++||+|+++|
T Consensus       246 FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l  323 (497)
T 3i44_A          246 FTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCF-YNSGQSCNAPTRMLVEQAIYDKAIKTA  323 (497)
T ss_dssp             EESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHH
T ss_pred             EeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHH-hcCCCCcccCCEEEEcHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999 999999999999 999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcc-cCC---CCceeeceEeeCCCCCCcccccc
Q 009109          331 RNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQ-RDE---KQLKIAPTILLDVPDDSTIMKEE  404 (543)
Q Consensus       331 ~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~-~~~---~g~~~~Ptvl~~~~~~~~~~~~E  404 (543)
                      +++++++++|||.+ ++++||++++.+++++.++|+++.+ ++++++||. .+.   .|+|++|||+.+++++|++++||
T Consensus       324 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE  403 (497)
T 3i44_A          324 KDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREE  403 (497)
T ss_dssp             HHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSC
T ss_pred             HHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCc
Confidence            99999999999987 6799999999999999999999865 679999994 332   69999999999999999999999


Q ss_pred             cccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcc
Q 009109          405 IFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYH  484 (543)
Q Consensus       405 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~  484 (543)
                      +||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||. .  ...+.+||||+|.||+|+++
T Consensus       404 iFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~--~~~~~~PfGG~k~SG~Gr~~  480 (497)
T 3i44_A          404 IFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-H--ELPGGSYFGGVKFSGRAREG  480 (497)
T ss_dssp             CCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-C--CCCTTCCBCCSGGGCCCCBS
T ss_pred             ccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccc
Confidence            99999999999999999999999999999999999999999999999999999994 2  35688999999999999999


Q ss_pred             hHHHHHHhhhceEEE
Q 009109          485 GKFSFDAFSHKKAVL  499 (543)
Q Consensus       485 g~~~~~~~~~~k~v~  499 (543)
                      |.+++++|++.|+|+
T Consensus       481 G~~gl~~~t~~K~v~  495 (497)
T 3i44_A          481 GLWGIKEFLDTKAIS  495 (497)
T ss_dssp             HHHHHHTTEEEEEES
T ss_pred             hHHHHHHhcceeEEE
Confidence            999999999999985

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=100.00  E-value=5.1e-102  Score=830.55  Aligned_cols=468  Identities=21%  Similarity=0.317  Sum_probs=434.7

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQS   97 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~--~w~~~~~~~R~~iL~~   97 (543)
                      .++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||+  .|+.+++.+|.++|++
T Consensus        37 ~~~~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~v-~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~  106 (517)
T 2o2p_A           37 YQLFIGG-EFVDAEGSKTYNTI--------NPTDGSVICQV-SLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYR  106 (517)
T ss_dssp             CSEEETT-EEECCGGGCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHH
T ss_pred             CCeEECC-EEecCCCCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHH
Confidence            4689999 99988777777777        88899999666 99999999999999999999  9999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCC-cceEEeecceEEEEE
Q 009109           98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPS-SAEIISEPLGVVLVI  176 (543)
Q Consensus        98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~GVv~~i  176 (543)
                      ++++|+++.++|++++++|+|||+.+++..|+..+++.++++++.++++.+.. .+......+. ..++.++|+|||++|
T Consensus       107 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I  185 (517)
T 2o2p_A          107 LADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIV  185 (517)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEE
T ss_pred             HHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEE
Confidence            99999999999999999999999999974599999999999999888765422 1111000122 568999999999999


Q ss_pred             cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109          177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      +|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.+++|++|+ ||+|+|||
T Consensus       186 ~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTG  265 (517)
T 2o2p_A          186 IPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG  265 (517)
T ss_dssp             CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEES
T ss_pred             CCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEEC
Confidence            9999999999999999999999999999999999999999999999 99999999999 567899999996 99999999


Q ss_pred             ChHHHHHHHHHHh-cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109          254 SPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN  332 (543)
Q Consensus       254 S~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~  332 (543)
                      |+++|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++
T Consensus       266 S~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~  344 (517)
T 2o2p_A          266 STEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVF-FNKGENCIAAGRLFVEESIHNQFVQKVVE  344 (517)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEeHHHHHHHHHHHHH
Confidence            9999999999999 999999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC-CCceeeceEeeCCCCCCcccccccccce
Q 009109          333 ELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPL  409 (543)
Q Consensus       333 ~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPv  409 (543)
                      +++++++|||.+ ++++||++++.+++++.++++++.+ ++++++||.... .|+|++|||+.+++++|++++||+||||
T Consensus       345 ~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV  424 (517)
T 2o2p_A          345 EVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPI  424 (517)
T ss_dssp             HHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSE
T ss_pred             HHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccE
Confidence            999999999976 6899999999999999999999865 679999997643 6999999999999999999999999999


Q ss_pred             eeeeccCC--HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHH
Q 009109          410 LPIVTVEK--IEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF  487 (543)
Q Consensus       410 l~v~~~~~--~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~  487 (543)
                      ++|++|+|  +||||+++|+++|||++||||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+
T Consensus       425 l~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~  502 (517)
T 2o2p_A          425 MIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNK--TDVAAPFGGFKQSGFGKDLGEA  502 (517)
T ss_dssp             EEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCCGGGEECCBSHHH
T ss_pred             EEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCC--CCCCCCcCCcCcCCcCccChHH
Confidence            99999999  9999999999999999999999999999999999999999998754  4678999999999999999999


Q ss_pred             HHHHhhhceEEEEe
Q 009109          488 SFDAFSHKKAVLYR  501 (543)
Q Consensus       488 ~~~~~~~~k~v~~~  501 (543)
                      ++++|++.|+|+++
T Consensus       503 ~l~~~~~~k~v~~~  516 (517)
T 2o2p_A          503 ALNEYLRIKTVTFE  516 (517)
T ss_dssp             HHHTTEEEEEEEEE
T ss_pred             HHHHhCCceEEEee
Confidence            99999999999764

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=100.00  E-value=4e-102  Score=831.38  Aligned_cols=468  Identities=24%  Similarity=0.338  Sum_probs=437.2

Q ss_pred             cccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHH
Q 009109           16 AACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQI   95 (543)
Q Consensus        16 ~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL   95 (543)
                      +....++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|
T Consensus        11 ~~~~~~~~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L   80 (517)
T 3r31_A           11 AQPKASHFIDG-DYVEDNTGTPFESI--------FPATGEMIAKL-HAATPAIVERAIASAKRAQKEWAAMSPMARGRIL   80 (517)
T ss_dssp             TCCSSSEEETT-EEECCTTSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred             cccccCeeECC-EEecCCCCCEEEEE--------CCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHH
Confidence            44557899999 99999888888888        88899999766 9999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhh---hcCCCcccccCcCCCCcceEEeecceE
Q 009109           96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIISEPLGV  172 (543)
Q Consensus        96 ~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~GV  172 (543)
                      ++++++|++++++|++++++|+|||..++   |+..+++.++++++..+.   |........   ..+. .+++++|+||
T Consensus        81 ~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~---~~~~-~~~~~~P~GV  153 (517)
T 3r31_A           81 KRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPL---GGDF-AYTKRVPLGV  153 (517)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC---SSSE-EEEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCccccc---CCCc-ceEEEcCccE
Confidence            99999999999999999999999999988   999999999999998876   333332211   1234 8899999999


Q ss_pred             EEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEE
Q 009109          173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKIL  250 (543)
Q Consensus       173 v~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~  250 (543)
                      |++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.++.|++|+ ||+|+
T Consensus       154 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~  233 (517)
T 3r31_A          154 CVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVS  233 (517)
T ss_dssp             EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEE
T ss_pred             EEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEe
Confidence            99999999999999999999999999999999999999999999999999 99999999999888999999997 99999


Q ss_pred             EeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHH
Q 009109          251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL  330 (543)
Q Consensus       251 ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l  330 (543)
                      ||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|
T Consensus       234 FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l  312 (517)
T 3r31_A          234 LTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENL  312 (517)
T ss_dssp             EESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEGGGHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHh-cCCCceeccCceEEEeHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999 999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcc-cC---CCCceeeceEeeCCCCCCcccccc
Q 009109          331 RNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQ-RD---EKQLKIAPTILLDVPDDSTIMKEE  404 (543)
Q Consensus       331 ~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~-~~---~~g~~~~Ptvl~~~~~~~~~~~~E  404 (543)
                      +++++++++|||.+ ++++||++++.+++++.++|+++.+ ++++++||. .+   ..|+|++|||+.+++++|++++||
T Consensus       313 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE  392 (517)
T 3r31_A          313 KRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREE  392 (517)
T ss_dssp             HHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSC
T ss_pred             HHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccce
Confidence            99999999999987 6799999999999999999999875 679999993 11   368999999999999999999999


Q ss_pred             cccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcc
Q 009109          405 IFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYH  484 (543)
Q Consensus       405 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~  484 (543)
                      +||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++
T Consensus       393 iFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~  470 (517)
T 3r31_A          393 IFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNL--CPVEIPFGGSKQSGFGREN  470 (517)
T ss_dssp             CSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCC--CCTTSCBCCEETTEECCBS
T ss_pred             eeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCC--CCCCCCcCCcCcCCCCcCc
Confidence            99999999999999999999999999999999999999999999999999999999764  5789999999999999999


Q ss_pred             hHHHHHHhhhceEEEEecC
Q 009109          485 GKFSFDAFSHKKAVLYRSF  503 (543)
Q Consensus       485 g~~~~~~~~~~k~v~~~~~  503 (543)
                      |.+|+++|++.|+|+++..
T Consensus       471 G~~gl~~ft~~K~v~~~~~  489 (517)
T 3r31_A          471 SAAALEHYSELKTVYVSTG  489 (517)
T ss_dssp             TGGGGGGSEEEEEEEECCC
T ss_pred             hHHHHHHhhceEEEEEcCC
Confidence            9999999999999988653

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=100.00  E-value=6.2e-102  Score=828.51  Aligned_cols=468  Identities=22%  Similarity=0.322  Sum_probs=437.6

Q ss_pred             cccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 009109           18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS   97 (543)
Q Consensus        18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~   97 (543)
                      ...++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++
T Consensus        11 ~~~~~~I~G-~~~~~~~~~~~~~~--------nP~tg~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~   80 (497)
T 3k2w_A           11 KNKVNFIGG-QYVPSNESDTIDIL--------SPSTGKVIGEI-PAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRT   80 (497)
T ss_dssp             CTTCEEETT-EEECCSSCCEEEEE--------CSSSCSEEEEE-ECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             cccceeECC-EEecCCCCCEEEEE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence            446899999 99999888888888        88899999766 999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEc
Q 009109           98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS  177 (543)
Q Consensus        98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~  177 (543)
                      ++++|+++.++|++++++|+|||..+++ .|+..+++.+++++..++++.+... .  ....+...++.++|+|||++|+
T Consensus        81 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVV~~I~  156 (497)
T 3k2w_A           81 FANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDIL-P--SDNQDEKIYIHKVPRGVVVGIT  156 (497)
T ss_dssp             HHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEE-E--CSSTTEEEEEEEEECSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-c--cCCCCcceeEEEcCCceEEEEC
Confidence            9999999999999999999999999998 4999999999999998887754321 1  1123456788999999999999


Q ss_pred             CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCC
Q 009109          178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS  254 (543)
Q Consensus       178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS  254 (543)
                      |||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||
T Consensus       157 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS  236 (497)
T 3k2w_A          157 AWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGS  236 (497)
T ss_dssp             CSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESC
T ss_pred             CCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECc
Confidence            999999999999999999999999999999999999999999999 99999999999 668999999997 999999999


Q ss_pred             hHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH
Q 009109          255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL  334 (543)
Q Consensus       255 ~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~  334 (543)
                      +++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++
T Consensus       237 ~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~  315 (497)
T 3k2w_A          237 TVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPLV  315 (497)
T ss_dssp             HHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEETTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-hCCCCCCcCCcEEEEeHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999 9999999999999999999999999999999


Q ss_pred             HhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc--C-C--CCceeeceEeeCCCCCCccccccccc
Q 009109          335 KEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR--D-E--KQLKIAPTILLDVPDDSTIMKEEIFG  407 (543)
Q Consensus       335 ~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~--~-~--~g~~~~Ptvl~~~~~~~~~~~~E~fg  407 (543)
                      +++++|||.+ ++++||++++.+++++.++++++.+ ++++++||..  . .  .|+|++|||+.+++++|++++||+||
T Consensus       316 ~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFG  395 (497)
T 3k2w_A          316 KGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFG  395 (497)
T ss_dssp             HTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCS
T ss_pred             HhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccC
Confidence            9999999987 6799999999999999999999865 6899999973  2 2  68999999999999999999999999


Q ss_pred             ceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHH
Q 009109          408 PLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF  487 (543)
Q Consensus       408 Pvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~  487 (543)
                      ||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+++.+  .+.+||||+|.||+|+++|.+
T Consensus       396 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~  473 (497)
T 3k2w_A          396 PILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGE--QHQGFHNGWKQSGFGGEDGKF  473 (497)
T ss_dssp             SEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC--CTTSCBCCEETSEESCBSHHH
T ss_pred             cEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCC--CCCCCcCCcCCCcCCccchHH
Confidence            999999999999999999999999999999999999999999999999999998764  488999999999999999999


Q ss_pred             HHHHhhhceEEEEec
Q 009109          488 SFDAFSHKKAVLYRS  502 (543)
Q Consensus       488 ~~~~~~~~k~v~~~~  502 (543)
                      |+++|++.|+|+++.
T Consensus       474 gl~~ft~~k~v~~~~  488 (497)
T 3k2w_A          474 GLEQYLEKKTVYINE  488 (497)
T ss_dssp             HHHTTEEEEEEEEEC
T ss_pred             HHHHhcceEEEEEEc
Confidence            999999999998865

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=100.00  E-value=1.3e-101  Score=831.07  Aligned_cols=468  Identities=20%  Similarity=0.319  Sum_probs=436.9

Q ss_pred             cccceeeecceecccCCcccccccccCccccccCCc-hhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 009109           18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ   96 (543)
Q Consensus        18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~   96 (543)
                      ...++|||| +|+.  ++.+++++        ||.| |++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|+
T Consensus        36 ~~~~~~I~G-~~~~--~~~~~~~~--------nP~t~~~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~  103 (538)
T 3qan_A           36 KEYPLIING-ERVT--TEDKIQSW--------NPARKDQLVGSV-SKANQDLAEKAIQSADEAFQTWRNVNPEERANILV  103 (538)
T ss_dssp             EEECEEETT-EEEC--CSSEEEEE--------CSSSTTCEEEEE-ECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred             cccceeECC-EEec--CCCeEEEE--------CCCCCCcEEEEE-cCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHH
Confidence            356899999 9998  66777777        8889 9999766 99999999999999999999999999999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109           97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI  176 (543)
Q Consensus        97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i  176 (543)
                      +++++|++++++|++++++|+|||..+++. |+..+++.++++++.+.++..++....   ..+...+++++|+|||++|
T Consensus       104 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I  179 (538)
T 3qan_A          104 KAAAIIRRRKHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILS---RPGEQNRYFYTPMGVTVTI  179 (538)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCC---CTTEEEEEEEEECCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecc---cCCcceeeecCCCcEEEEE
Confidence            999999999999999999999999999986 999999999999998666665543321   1245678999999999999


Q ss_pred             cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109          177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      +|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+|||
T Consensus       180 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTG  259 (538)
T 3qan_A          180 SPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTG  259 (538)
T ss_dssp             CCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEES
T ss_pred             CCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEEC
Confidence            9999999999999999999999999999999999999999999998 99999999999 677899999996 99999999


Q ss_pred             ChHHHHHHHHHHhcc------cCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHH
Q 009109          254 SPRVGRIVMAAAAKH------LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLI  327 (543)
Q Consensus       254 S~~~g~~i~~~a~~~------~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~  327 (543)
                      |+++|+.|++.++++      +||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+
T Consensus       260 S~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~  338 (538)
T 3qan_A          260 SKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAF-GFSGQKCSAGSRAVIHKDVYDEVL  338 (538)
T ss_dssp             CHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEETTTHHHHH
T ss_pred             CHHHHHHHHHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCccCceeEEehHHHHHHH
Confidence            999999999999998      9999999999999999999999999999999999 999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCC-CCceeeceEeeCCCCCCccccccc
Q 009109          328 DSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEI  405 (543)
Q Consensus       328 ~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~  405 (543)
                      ++|+++++++++|||.+ ++++||++++.+++++.++++++.+.+++++||..+. .|+|++|||+.+++++|++++||+
T Consensus       339 ~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEi  418 (538)
T 3qan_A          339 EKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEI  418 (538)
T ss_dssp             HHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCC
T ss_pred             HHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCc
Confidence            99999999999999986 7799999999999999999999876449999998754 799999999999999999999999


Q ss_pred             ccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC-Ccc
Q 009109          406 FGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG-SYH  484 (543)
Q Consensus       406 fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~  484 (543)
                      ||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+...+...+.+||||+|.||+| +++
T Consensus       419 FGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~  498 (538)
T 3qan_A          419 FGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG  498 (538)
T ss_dssp             CSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBT
T ss_pred             CCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccc
Confidence            9999999999999999999999999999999999999999999999999999995444345789999999999999 999


Q ss_pred             hHHHHHHhhhceEEEEec
Q 009109          485 GKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       485 g~~~~~~~~~~k~v~~~~  502 (543)
                      |.+|+++|++.|+|+++.
T Consensus       499 G~~gl~~ft~~k~v~~~~  516 (538)
T 3qan_A          499 GPDYLALHMQAKTVSEMY  516 (538)
T ss_dssp             STTTGGGGEEEEEEEEEC
T ss_pred             cHHHHHHhhCeEEEEEec
Confidence            999999999999998864

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=100.00  E-value=1.1e-101  Score=826.44  Aligned_cols=466  Identities=24%  Similarity=0.367  Sum_probs=435.1

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI   98 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~   98 (543)
                      ..++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|+++
T Consensus        11 ~~~~~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~   80 (505)
T 3prl_A           11 NANILRNG-EWVESRTGERISIS--------APASGVALGSI-PALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAW   80 (505)
T ss_dssp             ECCEEETT-EEECCTTCCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred             ccCeeECC-EEecCCCCCEEEEE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence            35899999 99999888888888        88899999765 9999999999999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCC---CCcceEEeecceEEEE
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTY---PSSAEIISEPLGVVLV  175 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~GVv~~  175 (543)
                      +++|+++.++|++++++|+|||..+++. |+..+++.++++++.++++.+.. ........   +...+++++|+|||++
T Consensus        81 a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~P~GVV~~  158 (505)
T 3prl_A           81 ADLLEERKEIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGET-LKGDQFKGGSSKKIALVEREPLGVVLA  158 (505)
T ss_dssp             HHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEE-EEGGGSTTTCSSEEEEEEEEECSEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcc-ccccccccccCCceeEEEEcCCcEEEE
Confidence            9999999999999999999999999985 99999999999999988865432 11110000   3456889999999999


Q ss_pred             EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEe
Q 009109          176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYT  252 (543)
Q Consensus       176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ft  252 (543)
                      |+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|++|+ +|+|+||
T Consensus       159 I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FT  238 (505)
T 3prl_A          159 ISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFT  238 (505)
T ss_dssp             EECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEE
T ss_pred             ECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEe
Confidence            99999999999999999999999999999999999999999999998 99999999999 578899999996 9999999


Q ss_pred             CChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109          253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN  332 (543)
Q Consensus       253 GS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~  332 (543)
                      ||+++|+.|++.++  +||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++
T Consensus       239 GS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~  315 (505)
T 3prl_A          239 GGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKE  315 (505)
T ss_dssp             SCHHHHHHHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHH-hcCCCccccCceEEEeHHHHHHHHHHHHH
Confidence            99999999999888  9999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceee
Q 009109          333 ELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP  411 (543)
Q Consensus       333 ~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~  411 (543)
                      +++++++|||.+++++||++++.+++++.++++++.+ ++++++||..  .|+|++|||+.+++++|++++||+||||++
T Consensus       316 ~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~  393 (505)
T 3prl_A          316 LVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVLP  393 (505)
T ss_dssp             HHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEE
T ss_pred             HHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEEE
Confidence            9999999999877799999999999999999999875 6799999974  689999999999999999999999999999


Q ss_pred             eeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHH
Q 009109          412 IVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDA  491 (543)
Q Consensus       412 v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~  491 (543)
                      |++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++. ...+.+||||+|.||+|+++|.+|+++
T Consensus       394 V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~~PFGG~k~SG~Gr~~g~~~~~~  472 (505)
T 3prl_A          394 IIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTE-RGPDHFPFLGVKKSGLGVQGIKPSLLS  472 (505)
T ss_dssp             EEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCC-SCSTTSCBCCEETTEESCBSHHHHHHH
T ss_pred             EEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCC-CCCCCCCcCCcCcCCCCcCccHHHHHH
Confidence            9999999999999999999999999999999999999999999999999875 356889999999999999999999999


Q ss_pred             hhhceEEEEec
Q 009109          492 FSHKKAVLYRS  502 (543)
Q Consensus       492 ~~~~k~v~~~~  502 (543)
                      |++.|+|+++.
T Consensus       473 f~~~k~v~~~~  483 (505)
T 3prl_A          473 MTRERVTVLNL  483 (505)
T ss_dssp             TEEEEEEEEEC
T ss_pred             hhceEEEEEeC
Confidence            99999998864

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.9e-102  Score=829.05  Aligned_cols=476  Identities=21%  Similarity=0.273  Sum_probs=435.8

Q ss_pred             chhhhhhcccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCC
Q 009109            7 RAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTK   86 (543)
Q Consensus         7 ~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~   86 (543)
                      .|+|+.+    ...++|||| +|+.+.++++++++        ||.||++++.+ +.++.+|+++|+++|++||+.|+.+
T Consensus        18 ~~~~s~m----~~~~~~I~G-~~~~~~~~~~~~v~--------nP~tg~~i~~~-~~~~~~dv~~av~~A~~A~~~w~~~   83 (521)
T 4e4g_A           18 LYFQSMM----YELGHFIDG-KRVAGTSGRVSNIF--------NPATGEVQGTV-ALASDADLAAAVESAKAAQPKWAAT   83 (521)
T ss_dssp             ------C----EEECEEETT-EEECCSSSCEEEEE--------ETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             hhHhhhh----hccCeeECC-EEecCCCCCEEEEE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhccC
Confidence            4555533    345899999 99999888888888        88899999766 9999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEE
Q 009109           87 SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEII  166 (543)
Q Consensus        87 ~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (543)
                      +..+|.++|++++++|++++++|++++++|+|||..+++. |+..+++.++++++..+. .......  ....+...+++
T Consensus        84 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~-~~~~~~~--~~~~~~~~~~~  159 (521)
T 4e4g_A           84 NPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHL-QKSEFTE--GAGPGIDMYSI  159 (521)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHH-TCEEEEE--EEETTEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHH-hcCcccc--cCCCCcceeEE
Confidence            9999999999999999999999999999999999999984 999999999999886554 3322111  11123457889


Q ss_pred             eecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC
Q 009109          167 SEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK  245 (543)
Q Consensus       167 ~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~  245 (543)
                      ++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.+.+|++|+
T Consensus       160 ~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p  239 (521)
T 4e4g_A          160 RQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHP  239 (521)
T ss_dssp             EEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCT
T ss_pred             EcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999999999999999999 99999999999888889999996


Q ss_pred             -CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCC-cH
Q 009109          246 -WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD-FA  323 (543)
Q Consensus       246 -v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~-i~  323 (543)
                       ||+|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||++ +|
T Consensus       240 ~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~~i~  318 (521)
T 4e4g_A          240 DIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGY-GSAGERCMAISVAVPVGEETA  318 (521)
T ss_dssp             TCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTSEEEEEEBSHHHH
T ss_pred             CcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHH-hCCCCCcccCeEEEEeCchHH
Confidence             999999999999999999999999999999999999999999999999999999999 999999999999999999 99


Q ss_pred             HHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-----CCCceeeceEeeCCCC
Q 009109          324 PKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-----EKQLKIAPTILLDVPD  396 (543)
Q Consensus       324 ~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-----~~g~~~~Ptvl~~~~~  396 (543)
                      |+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++.+ ++++++||...     ..|+|++|||+.++++
T Consensus       319 d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~  398 (521)
T 4e4g_A          319 NRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTP  398 (521)
T ss_dssp             HHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCT
T ss_pred             HHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCC
Confidence            999999999999999999976 6799999999999999999999865 67999999642     4689999999999999


Q ss_pred             CCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCC
Q 009109          397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVG  476 (543)
Q Consensus       397 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~  476 (543)
                      +|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++. ...+.+||||+|
T Consensus       399 ~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~~PfGG~k  477 (521)
T 4e4g_A          399 DMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIP-VPLAYHSFGGWK  477 (521)
T ss_dssp             TSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSC-CCCTTSCBCCEE
T ss_pred             CCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCC-CCCCCCCcCCcc
Confidence            9999999999999999999999999999999999999999999999999999999999999998764 345789999999


Q ss_pred             CCCCC--CcchHHHHHHhhhceEEEEec
Q 009109          477 ESGMG--SYHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       477 ~SG~G--~~~g~~~~~~~~~~k~v~~~~  502 (543)
                      .||+|  +++|.+|+++|++.|+|+++.
T Consensus       478 ~SG~G~~~~~G~~gl~~ft~~K~v~~~~  505 (521)
T 4e4g_A          478 SSSFGDLNQHGTDSIKFWTRTKTITSRW  505 (521)
T ss_dssp             TTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred             cCCCCCCccchHHHHHHhheEEEEEEec
Confidence            99999  799999999999999998754

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=100.00  E-value=1.8e-101  Score=823.00  Aligned_cols=465  Identities=23%  Similarity=0.351  Sum_probs=433.5

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a   99 (543)
                      .++|||| +|+.+.+ .+++++        ||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++++
T Consensus        24 ~~~~i~G-~~~~~~~-~~~~v~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a   92 (495)
T 1wnd_A           24 HKLLING-ELVSGEG-EKQPVY--------NPATGDVLLEI-AEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLA   92 (495)
T ss_dssp             CCEEETT-EEECCCS-CEEEEE--------ETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred             cCeEECC-EEecCCC-CeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Confidence            4689999 9998755 677777        88899999766 99999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW  179 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~  179 (543)
                      ++|++++++|++++++|+|||..+++..|+..+++.++++++.++++.+.. .+.  ...+...++.++|+|||++|+||
T Consensus        93 ~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~--~~~~~~~~~~~~P~GVV~~I~Pw  169 (495)
T 1wnd_A           93 DVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLA-AGE--YLEGHTSMIRRDPLGVVASIAPW  169 (495)
T ss_dssp             HHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEEC-BEE--EETTEEEEEEEEECSEEEEECCS
T ss_pred             HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccC--CCCCceeEEeeecCCeEEEECCC
Confidence            999999999999999999999999974499999999999999888764322 111  11233568899999999999999


Q ss_pred             chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHH
Q 009109          180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRV  257 (543)
Q Consensus       180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~  257 (543)
                      |||+.+.++++++||++||+||+|||+.+|+++.++++++.+++|+|+||+|+| +.+.+.+|++|+ ||+|+||||+++
T Consensus       170 N~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~  249 (495)
T 1wnd_A          170 NYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIAT  249 (495)
T ss_dssp             SSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHH
T ss_pred             cchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHH
Confidence            999999999999999999999999999999999999999999999999999999 678899999997 999999999999


Q ss_pred             HHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhh
Q 009109          258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF  337 (543)
Q Consensus       258 g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l  337 (543)
                      |+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++
T Consensus       250 G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~  328 (495)
T 1wnd_A          250 GEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATL  328 (495)
T ss_dssp             HHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999 9999999999999999999999999999999999


Q ss_pred             cCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-C-CEEEECcc-cCCCCceeeceEeeCCCCCCcccccccccceeeee
Q 009109          338 FGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-S-DKIVYGGQ-RDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV  413 (543)
Q Consensus       338 ~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~-~~v~~gg~-~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~  413 (543)
                      ++|||.+ ++++|||+++.+++++.++++++.+ | +++++||. .++.|+|++|||+.+++++|++++||+||||++|+
T Consensus       329 ~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~  408 (495)
T 1wnd_A          329 KSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVT  408 (495)
T ss_dssp             CBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEE
T ss_pred             cCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEE
Confidence            9999987 7899999999999999999999865 5 79999997 54469999999999999999999999999999999


Q ss_pred             ccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhh
Q 009109          414 TVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS  493 (543)
Q Consensus       414 ~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~  493 (543)
                      +|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++|+
T Consensus       409 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~f~  486 (495)
T 1wnd_A          409 PFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYT  486 (495)
T ss_dssp             EECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTE
T ss_pred             EeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCCcCcCCccchHHHHHHhh
Confidence            99999999999999999999999999999999999999999999998754  4688999999999999999999999999


Q ss_pred             hceEEEEe
Q 009109          494 HKKAVLYR  501 (543)
Q Consensus       494 ~~k~v~~~  501 (543)
                      +.|+|+++
T Consensus       487 ~~k~v~~~  494 (495)
T 1wnd_A          487 VVRHVMVK  494 (495)
T ss_dssp             EEEEEEEE
T ss_pred             CeEEEEec
Confidence            99999763

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=100.00  E-value=3e-101  Score=823.64  Aligned_cols=466  Identities=23%  Similarity=0.347  Sum_probs=435.5

Q ss_pred             ccceeeecceecccCCccc-ccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHIS-FPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS   97 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~-~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~   97 (543)
                      ..++|||| +|+.+.++.+ ++++        ||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++
T Consensus        19 ~~~~~i~g-~~~~~~~~~~~~~v~--------nP~tg~~i~~~-~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~   88 (503)
T 1a4s_A           19 DDLNYWGG-RRIKSKDGATTEPVF--------EPATGRVLCQM-VPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLE   88 (503)
T ss_dssp             SCCEEETT-EEECCCTTCCCEEEE--------CTTTCCEEEEE-CCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred             ccceeECC-EEecCCCCCceEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHH
Confidence            35689999 9999877777 7777        88899999766 999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEc
Q 009109           98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS  177 (543)
Q Consensus        98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~  177 (543)
                      ++++|+++.++|++++++|+|||+.++. .|+..+++.++++++.++++.+. .....   .+...++.++|+|||++|+
T Consensus        89 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~  163 (503)
T 1a4s_A           89 AARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQ-HIQLP---GGAFAYTRREPLGVCAGIL  163 (503)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEE-EEECG---GGCEEEEEEEECSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCC-cccCC---CCceeEEEEecCceEEEEC
Confidence            9999999999999999999999999997 49999999999999998886542 11111   2345688999999999999


Q ss_pred             CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCCh
Q 009109          178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSP  255 (543)
Q Consensus       178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~  255 (543)
                      |||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.++.|++|+ +|+|+||||+
T Consensus       164 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~  243 (503)
T 1a4s_A          164 AWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSV  243 (503)
T ss_dssp             CSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCH
T ss_pred             CCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCH
Confidence            999999999999999999999999999999999999999999999 99999999999338899999997 9999999999


Q ss_pred             HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109          256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK  335 (543)
Q Consensus       256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~  335 (543)
                      .+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++
T Consensus       244 ~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~  322 (503)
T 1a4s_A          244 PTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTK  322 (503)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEehHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999 99999999999999999999999999999999


Q ss_pred             hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-------CCCceeeceEeeCCCCCCcccccccc
Q 009109          336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-------EKQLKIAPTILLDVPDDSTIMKEEIF  406 (543)
Q Consensus       336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-------~~g~~~~Ptvl~~~~~~~~~~~~E~f  406 (543)
                      ++++|||.+ ++++||++++.+++++.++++++.+ ++++++||...       ..|+|++|||+.+++++|++++||+|
T Consensus       323 ~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF  402 (503)
T 1a4s_A          323 AIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIF  402 (503)
T ss_dssp             TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCC
T ss_pred             hcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhcccc
Confidence            999999987 7899999999999999999999864 67999999764       35899999999999999999999999


Q ss_pred             cceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchH
Q 009109          407 GPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGK  486 (543)
Q Consensus       407 gPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~  486 (543)
                      |||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.
T Consensus       403 GPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~  480 (503)
T 1a4s_A          403 GPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI--SPVEVPFGGYKMSGFGRENGQ  480 (503)
T ss_dssp             SSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSTT
T ss_pred             CceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCC--CCCCCCCCCcCCCCCCccchH
Confidence            999999999999999999999999999999999999999999999999999998765  467899999999999999999


Q ss_pred             HHHHHhhhceEEEEec
Q 009109          487 FSFDAFSHKKAVLYRS  502 (543)
Q Consensus       487 ~~~~~~~~~k~v~~~~  502 (543)
                      +++++|++.|+|+++.
T Consensus       481 ~~l~~f~~~k~v~~~~  496 (503)
T 1a4s_A          481 ATVDYYSQLKTVIVEM  496 (503)
T ss_dssp             GGGGGSEEEEEEEECC
T ss_pred             HHHHHhcCceEEEEcc
Confidence            9999999999998753

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=100.00  E-value=7.8e-102  Score=826.78  Aligned_cols=465  Identities=25%  Similarity=0.370  Sum_probs=435.6

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMSQIQ   96 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~---~w~~~~~~~R~~iL~   96 (543)
                      .++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||+   .|+.++..+|.++|+
T Consensus        20 ~~~~i~G-~~~~~~~~~~~~v~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~   89 (500)
T 1o04_A           20 NQIFINN-EWHDAVSRKTFPTV--------NPSTGEVICQV-AEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLN   89 (500)
T ss_dssp             CSEEETT-EEECCTTCCEEEEE--------ETTTTEEEEEE-ECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHH
T ss_pred             cCeeECC-EEecCCCCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHH
Confidence            3689999 99998777777777        88899999666 99999999999999999999   899999999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109           97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI  176 (543)
Q Consensus        97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i  176 (543)
                      +++++|++++++|++++++|+|||..++...|+..+++.++++++.+++|.+.. ...   ..+...+++++|+|||++|
T Consensus        90 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVv~~I  165 (500)
T 1o04_A           90 RLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT-IPI---DGDFFSYTRHEPVGVCGQI  165 (500)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEE-ECC---SSSEEEEEEEEECCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcc-eec---CCCceEEEEEecCCcEEEE
Confidence            999999999999999999999999998865699999999999999988875432 111   1234568899999999999


Q ss_pred             cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109          177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      +|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.+..|++|+ ||+|+|||
T Consensus       166 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTG  245 (500)
T 1o04_A          166 IPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG  245 (500)
T ss_dssp             CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEES
T ss_pred             CCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEEC
Confidence            9999999999999999999999999999999999999999999999 99999999999 778899999997 99999999


Q ss_pred             ChHHHHHHHHHHh-cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109          254 SPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN  332 (543)
Q Consensus       254 S~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~  332 (543)
                      |+++|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++
T Consensus       246 S~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~  324 (500)
T 1o04_A          246 STEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVA  324 (500)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-ccCCCCCCCCCEEEEehhHHHHHHHHHHH
Confidence            9999999999999 999999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccce
Q 009109          333 ELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPL  409 (543)
Q Consensus       333 ~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv  409 (543)
                      +++++++|||.+ ++++||++++.+++++.++++++.+ ++++++||... ..|+|++|||+.+++++|++++||+||||
T Consensus       325 ~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV  404 (500)
T 1o04_A          325 RAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPV  404 (500)
T ss_dssp             HHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSE
T ss_pred             HHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceE
Confidence            999999999987 6799999999999999999999865 67999999764 36899999999999999999999999999


Q ss_pred             eeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHH
Q 009109          410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF  489 (543)
Q Consensus       410 l~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~  489 (543)
                      ++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++
T Consensus       405 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl  482 (500)
T 1o04_A          405 MQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGL  482 (500)
T ss_dssp             EEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGG
T ss_pred             EEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHH
Confidence            999999999999999999999999999999999999999999999999998764  457899999999999999999999


Q ss_pred             HHhhhceEEEEe
Q 009109          490 DAFSHKKAVLYR  501 (543)
Q Consensus       490 ~~~~~~k~v~~~  501 (543)
                      ++|++.|+|.++
T Consensus       483 ~~f~~~K~v~~~  494 (500)
T 1o04_A          483 QAYTEVKTVTVK  494 (500)
T ss_dssp             GGGEEEEEEEEE
T ss_pred             HHhcceEEEEEe
Confidence            999999999875

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=100.00  E-value=2.2e-101  Score=823.42  Aligned_cols=465  Identities=25%  Similarity=0.363  Sum_probs=435.7

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMSQIQ   96 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~---~w~~~~~~~R~~iL~   96 (543)
                      .++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||+   .|+.++..+|.++|+
T Consensus        21 ~~~~i~G-~~~~~~~~~~~~v~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~   90 (501)
T 1bxs_A           21 TKIFINN-EWHSSVSGKKFPVF--------NPATEEKLCEV-EEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLN   90 (501)
T ss_dssp             CSEEETT-EEECCTTCCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHH
T ss_pred             cCeeECC-EEecCCCCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHH
Confidence            4689999 99998777777777        88899999666 99999999999999999999   899999999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109           97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI  176 (543)
Q Consensus        97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i  176 (543)
                      +++++|++++++|++++++|+|||+.++...|+..+++.++++++.+++|.+.. ...   ..+...+++++|+|||++|
T Consensus        91 ~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVV~~I  166 (501)
T 1bxs_A           91 KLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRT-IPM---DGNFFTYTRSEPVGVCGQI  166 (501)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEE-ECC---SSSEEEEEEEEECCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCe-eec---cCCcceeEEecCCceEEEE
Confidence            999999999999999999999999998866699999999999999998876532 111   2234568999999999999


Q ss_pred             cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109          177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      +|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.+++|++|+ ||+|+|||
T Consensus       167 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTG  246 (501)
T 1bxs_A          167 IPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG  246 (501)
T ss_dssp             CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEES
T ss_pred             CCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEEC
Confidence            9999999999999999999999999999999999999999999999 99999999999 778899999997 99999999


Q ss_pred             ChHHHHHHHHHHh-cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109          254 SPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN  332 (543)
Q Consensus       254 S~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~  332 (543)
                      |+++|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++
T Consensus       247 S~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~  325 (501)
T 1bxs_A          247 STEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVE  325 (501)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEchhHHHHHHHHHHH
Confidence            9999999999999 999999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccce
Q 009109          333 ELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPL  409 (543)
Q Consensus       333 ~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv  409 (543)
                      +++++++|||.+ ++++||++++.+++++.++++++.+ ++++++||... ..|+|++|||+.+++++|++++||+||||
T Consensus       326 ~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV  405 (501)
T 1bxs_A          326 RAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPV  405 (501)
T ss_dssp             HHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSE
T ss_pred             HHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccce
Confidence            999999999987 6799999999999999999999865 67999999764 46899999999999999999999999999


Q ss_pred             eeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHH
Q 009109          410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF  489 (543)
Q Consensus       410 l~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~  489 (543)
                      ++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++
T Consensus       406 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~pfGG~k~SG~G~~~G~~~l  483 (501)
T 1bxs_A          406 QQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGF  483 (501)
T ss_dssp             EEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHH
T ss_pred             EEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCC--CCCCCCCCCcCcCCcCccchHHHH
Confidence            999999999999999999999999999999999999999999999999998754  457899999999999999999999


Q ss_pred             HHhhhceEEEEe
Q 009109          490 DAFSHKKAVLYR  501 (543)
Q Consensus       490 ~~~~~~k~v~~~  501 (543)
                      ++|++.|+|.++
T Consensus       484 ~~f~~~K~v~~~  495 (501)
T 1bxs_A          484 HEYTEVKTVTIK  495 (501)
T ss_dssp             HTTEEEEEEEEE
T ss_pred             HHhhCeeEEEEc
Confidence            999999999875

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.5e-101  Score=824.32  Aligned_cols=464  Identities=25%  Similarity=0.373  Sum_probs=434.6

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQS   97 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~--~w~~~~~~~R~~iL~~   97 (543)
                      .++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||+  .|+.+++.+|.++|++
T Consensus         9 ~~~~i~G-~~~~~~~~~~~~~~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~   78 (495)
T 3b4w_A            9 DKLFIGG-KWTKPSTSDVIEVR--------CPATGEYVGKV-PMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAA   78 (495)
T ss_dssp             SSEEETT-EEECCSSCCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHH
T ss_pred             cceeECC-EEecCCCCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHH
Confidence            4689999 99998777777777        88899999666 99999999999999999999  9999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEc
Q 009109           98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS  177 (543)
Q Consensus        98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~  177 (543)
                      ++++|++++++|++++++|+|||..+++..|+..+++.++++++.++++.+.. .+   ...+...++.++|+|||++|+
T Consensus        79 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~---~~~~~~~~~~~~P~GVv~~I~  154 (495)
T 3b4w_A           79 AVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTE-TR---TGSYGQSIVSREPVGVVGAIV  154 (495)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEE-EE---EETTEEEEEEEEECCEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-cc---CCCCceEEEEEccCceEEEEC
Confidence            99999999999999999999999999974599999999999999888875432 11   112335689999999999999


Q ss_pred             CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCCh
Q 009109          178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSP  255 (543)
Q Consensus       178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~  255 (543)
                      |||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.+.+|++|+ ||+|+||||+
T Consensus       155 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~  234 (495)
T 3b4w_A          155 AWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSS  234 (495)
T ss_dssp             CSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCH
T ss_pred             CCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCH
Confidence            999999999999999999999999999999999999999999999 99999999999778899999996 9999999999


Q ss_pred             HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109          256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK  335 (543)
Q Consensus       256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~  335 (543)
                      ++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++
T Consensus       235 ~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~  313 (495)
T 3b4w_A          235 AVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVT  313 (495)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHh-hcCCCCCCCCeEEEEcccHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999 99999999999999999999999999999999


Q ss_pred             hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC---CCceeeceEeeCCCCCCccccccccccee
Q 009109          336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPLL  410 (543)
Q Consensus       336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl  410 (543)
                      ++++|||.+ ++++||++++.+++++.++++++.+ ++++++||....   .|+|++|||+.+++++|++++||+||||+
T Consensus       314 ~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  393 (495)
T 3b4w_A          314 ALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVL  393 (495)
T ss_dssp             HSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred             hcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceE
Confidence            999999977 7799999999999999999999875 579999997643   68999999999999999999999999999


Q ss_pred             eeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHH
Q 009109          411 PIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFD  490 (543)
Q Consensus       411 ~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~  490 (543)
                      +|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.   ..+.+||||+|.||+|+++|.+|++
T Consensus       394 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~  470 (495)
T 3b4w_A          394 AIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVE  470 (495)
T ss_dssp             EEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHH
T ss_pred             EEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHH
Confidence            9999999999999999999999999999999999999999999999999874   4578999999999999999999999


Q ss_pred             HhhhceEEEEe
Q 009109          491 AFSHKKAVLYR  501 (543)
Q Consensus       491 ~~~~~k~v~~~  501 (543)
                      +|++.|+|+++
T Consensus       471 ~~~~~k~v~~~  481 (495)
T 3b4w_A          471 HFTQQKSVLLP  481 (495)
T ss_dssp             TTEEEEEEECC
T ss_pred             HhcceeEEEEc
Confidence            99999999875

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=100.00  E-value=7.5e-101  Score=818.00  Aligned_cols=466  Identities=22%  Similarity=0.348  Sum_probs=434.7

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI   98 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~   98 (543)
                      ..++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|+++
T Consensus         6 ~~~~~i~g-~~~~~~~~~~~~v~--------~P~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~   75 (479)
T 2imp_A            6 QHPMYIDG-QFVTWRGDAWIDVV--------NPATEAVISRI-PDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKI   75 (479)
T ss_dssp             ECCEEETT-EEECCCCSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred             ccceeECC-EEecCCCCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence            35689999 99988777777777        88899999766 9999999999999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST  178 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p  178 (543)
                      +++|++++++|++++++|+|||..+++ .|+..+++.++++++.++++.+... +.  ...+...++.++|+|||++|+|
T Consensus        76 a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~~P~GVv~~I~P  151 (479)
T 2imp_A           76 SAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEII-QS--DRPGENILLFKRALGVTTGILP  151 (479)
T ss_dssp             HHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEE-CC--SSTTEEEEEEEEECSEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcc-cc--CCCCceeEEEEeccceEEEECC
Confidence            999999999999999999999999998 5999999999999988777654321 11  1123456899999999999999


Q ss_pred             CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCCh
Q 009109          179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP  255 (543)
Q Consensus       179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~  255 (543)
                      ||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ +|+|+||||+
T Consensus       152 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~  231 (479)
T 2imp_A          152 WNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV  231 (479)
T ss_dssp             SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCH
T ss_pred             CchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCH
Confidence            99999999999999999999999999999999999999999999 99999999999 456899999995 9999999999


Q ss_pred             HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109          256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK  335 (543)
Q Consensus       256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~  335 (543)
                      ++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++
T Consensus       232 ~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~  310 (479)
T 2imp_A          232 SAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQ  310 (479)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSS-TTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCcCCcEEEEehhhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999 99999999999999999999999999999999


Q ss_pred             hhcCCCCCC--CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccceee
Q 009109          336 EFFGKNPME--SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP  411 (543)
Q Consensus       336 ~l~~g~~~~--~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~  411 (543)
                      ++++|||.+  ++++|||+++.+++++.++++++.+ ++++++||.. +..|+|++|||+.+++++|++++||+||||++
T Consensus       311 ~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~  390 (479)
T 2imp_A          311 AVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLP  390 (479)
T ss_dssp             TCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEE
T ss_pred             hcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEE
Confidence            999999986  6799999999999999999999865 6799999976 33689999999999999999999999999999


Q ss_pred             eeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHH
Q 009109          412 IVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDA  491 (543)
Q Consensus       412 v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~  491 (543)
                      |++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..+  .+.+||||+|.||+|+++|.+++++
T Consensus       391 v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~  468 (479)
T 2imp_A          391 VVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHE  468 (479)
T ss_dssp             EEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHT
T ss_pred             EEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHH
Confidence            99999999999999999999999999999999999999999999999998764  5789999999999999999999999


Q ss_pred             hhhceEEEEe
Q 009109          492 FSHKKAVLYR  501 (543)
Q Consensus       492 ~~~~k~v~~~  501 (543)
                      |++.|+|+++
T Consensus       469 ~~~~k~v~~~  478 (479)
T 2imp_A          469 YLQTQVVYLQ  478 (479)
T ss_dssp             TEEEEEEEEE
T ss_pred             hcCeeEEEec
Confidence            9999999764

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=100.00  E-value=1.3e-100  Score=812.00  Aligned_cols=451  Identities=44%  Similarity=0.786  Sum_probs=417.1

Q ss_pred             CCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHH
Q 009109           64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL  143 (543)
Q Consensus        64 a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~  143 (543)
                      .+.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+|||..+++..|+..+++.++++++.+
T Consensus        15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~   94 (469)
T 3sza_A           15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL   94 (469)
T ss_dssp             ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57789999999999999999999999999999999999999999999999999999999997679999999999999999


Q ss_pred             hhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhc
Q 009109          144 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYV  223 (543)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~al  223 (543)
                      ++|..+..........+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.+++
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al  174 (469)
T 3sza_A           95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL  174 (469)
T ss_dssp             HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred             HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhC
Confidence            98876554332222234568899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEeecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcc
Q 009109          224 DNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM  303 (543)
Q Consensus       224 P~gvv~vv~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~  303 (543)
                      |+|+||+|+|+.+.+..|+.|++|+|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| 
T Consensus       175 P~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-  253 (469)
T 3sza_A          175 DKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-  253 (469)
T ss_dssp             CTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-
T ss_pred             CcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-
Confidence            9999999999877788888889999999999999999999999999999999999999999999999999999999999 


Q ss_pred             cCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCC
Q 009109          304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEK  382 (543)
Q Consensus       304 ~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~-~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~  382 (543)
                      .|+||.|++++|||||+++||+|+++|+++++++. |+|. +++++||++++.+++++.+++    +++++++||..+..
T Consensus       254 ~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~~~~  328 (469)
T 3sza_A          254 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTGDAA  328 (469)
T ss_dssp             GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCEETT
T ss_pred             hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc-CCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCccCCC
Confidence            99999999999999999999999999999999985 6554 478999999999999999999    47899999987778


Q ss_pred             CceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCc
Q 009109          383 QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTI  462 (543)
Q Consensus       383 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~  462 (543)
                      |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.
T Consensus       329 g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~  408 (469)
T 3sza_A          329 TRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVI  408 (469)
T ss_dssp             TTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSS
T ss_pred             CceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEecCCCC--CCCcCCCCChHHHH
Q 009109          463 VHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGD--STTRYPPYTAEKQK  520 (543)
Q Consensus       463 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~~--~~~~~~p~~~~~~~  520 (543)
                      .+...+.+||||+|.||+|+++|.+|+++||+.|+|++++.+.+  .+++||||+.+|.+
T Consensus       409 ~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~~~~~  468 (469)
T 3sza_A          409 VHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMTQ  468 (469)
T ss_dssp             GGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC----
T ss_pred             CCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCcccccccccccCCCCccccc
Confidence            66677899999999999999999999999999999999876544  67999999987765

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=100.00  E-value=9.4e-101  Score=817.63  Aligned_cols=466  Identities=22%  Similarity=0.347  Sum_probs=435.7

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI   98 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~   98 (543)
                      ..++|||| +|+.+.++++++++        ||.||++++.+ +.++.+|+++|+++|++||+.|+.++.++|.++|+++
T Consensus         9 ~~~~~i~g-~~~~~~~~~~~~~~--------~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~   78 (481)
T 3jz4_A            9 RQQALING-EWLDANNGEAIDVT--------NPANGDKLGSV-PKMGADETRAAIDAANRALPAWRALTAKERATILRNW   78 (481)
T ss_dssp             CCSEEETT-EEECCTTCCEEEEE--------CTTTCCEEEEE-ECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred             ccceeECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHH
Confidence            36799999 99999888888888        88899999766 9999999999999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST  178 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p  178 (543)
                      +++|+++.++|++++++|+|||..+++. |+..+++.+++++....+..... .  +....+...+++++|+|||++|+|
T Consensus        79 a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~-~--~~~~~~~~~~~~~~P~GVv~~I~P  154 (481)
T 3jz4_A           79 FNLMMEHQDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDT-I--PGHQADKRLIVIKQPIGVTAAITP  154 (481)
T ss_dssp             HHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEE-E--CCSSTTEEEEEEEEECCEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcc-c--cccCCCceEEEEEcCccEEEEECC
Confidence            9999999999999999999999999985 99999999999988766532211 1  111234567899999999999999


Q ss_pred             CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCCh
Q 009109          179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP  255 (543)
Q Consensus       179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~  255 (543)
                      ||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+
T Consensus       155 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~  234 (481)
T 3jz4_A          155 WNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGST  234 (481)
T ss_dssp             SSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCH
T ss_pred             CcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCH
Confidence            99999999999999999999999999999999999999999999 99999999999 678999999996 9999999999


Q ss_pred             HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109          256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK  335 (543)
Q Consensus       256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~  335 (543)
                      ++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++
T Consensus       235 ~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~  313 (481)
T 3jz4_A          235 EIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMS  313 (481)
T ss_dssp             HHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHH-HhCCCcccCCcEEEEeHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999 99999999999999999999999999999999


Q ss_pred             hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccceeee
Q 009109          336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI  412 (543)
Q Consensus       336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v  412 (543)
                      ++++|||.+ ++++||++++.+++++.++++++.+ ++++++||.. +..|+|++|||+.+++++|++++||+||||++|
T Consensus       314 ~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v  393 (481)
T 3jz4_A          314 KLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPL  393 (481)
T ss_dssp             TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEE
T ss_pred             hccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEE
Confidence            999999976 6799999999999999999999875 6799999976 446899999999999999999999999999999


Q ss_pred             eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHh
Q 009109          413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF  492 (543)
Q Consensus       413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~  492 (543)
                      ++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++|
T Consensus       394 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~  471 (481)
T 3jz4_A          394 FRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDY  471 (481)
T ss_dssp             EEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSHHHHHHTT
T ss_pred             EEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHh
Confidence            999999999999999999999999999999999999999999999999765  568899999999999999999999999


Q ss_pred             hhceEEEEe
Q 009109          493 SHKKAVLYR  501 (543)
Q Consensus       493 ~~~k~v~~~  501 (543)
                      ++.|+|++.
T Consensus       472 t~~k~v~~~  480 (481)
T 3jz4_A          472 LEIKYMCIG  480 (481)
T ss_dssp             EEEEEEEEE
T ss_pred             hceeEEEEe
Confidence            999999864

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=100.00  E-value=9.6e-101  Score=821.98  Aligned_cols=466  Identities=23%  Similarity=0.353  Sum_probs=435.2

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI   98 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~   98 (543)
                      ..++|||| +|+.+.++.+++++        ||.||++++++ +.++.+|+++|+++|++||+.|+.++..+|.++|+++
T Consensus        26 ~~~~~i~G-~~~~~~~~~~~~~~--------nP~tg~~i~~~-~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~   95 (515)
T 2d4e_A           26 PALHFIAG-EFVPSESGETFPSL--------DPATNEVLGVA-ARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRI   95 (515)
T ss_dssp             CBCEEETT-EEECCTTCCEEEEE--------ETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred             ccCeeECC-EEecCCCCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence            35789999 99998777777777        88899999766 9999999999999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST  178 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p  178 (543)
                      +++|+++.++|++++++|+|||..+++ .|+..+++.++++++.++++.+.. .+.  ...+...+++++|+|||++|+|
T Consensus        96 a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~-~~~--~~~~~~~~~~~~P~GVv~~I~P  171 (515)
T 2d4e_A           96 AELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDR-TFP--VDRDWLYYTVRVPAGPVGIITP  171 (515)
T ss_dssp             HHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEE-ECC--BTTTEEEEEEEEECCCEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-ccc--CCCCceeEEEEecCCceEEECC
Confidence            999999999999999999999999998 699999999999999888765321 111  1123456889999999999999


Q ss_pred             CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCCh
Q 009109          179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP  255 (543)
Q Consensus       179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~  255 (543)
                      ||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+
T Consensus       172 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~  251 (515)
T 2d4e_A          172 WNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGET  251 (515)
T ss_dssp             SSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCH
T ss_pred             CCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcH
Confidence            99999999999999999999999999999999999999999999 99999999999 567899999995 9999999999


Q ss_pred             HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109          256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK  335 (543)
Q Consensus       256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~  335 (543)
                      .+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++
T Consensus       252 ~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~  330 (515)
T 2d4e_A          252 ETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIF-SFNGERCTASSRLLVEEKIFEDFVGKVVERAR  330 (515)
T ss_dssp             HHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEehhHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999 99999999999999999999999999999999


Q ss_pred             hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCC---------CCceeeceEeeCCCCCCcccccc
Q 009109          336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDE---------KQLKIAPTILLDVPDDSTIMKEE  404 (543)
Q Consensus       336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~---------~g~~~~Ptvl~~~~~~~~~~~~E  404 (543)
                      ++++|||.+ ++++||++++.+++++.++|+++.+ ++++++||..+.         .|+|++|||+.+ +++|++++||
T Consensus       331 ~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eE  409 (515)
T 2d4e_A          331 AIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEE  409 (515)
T ss_dssp             HCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSC
T ss_pred             hcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhcc
Confidence            999999987 5899999999999999999999865 679999997643         699999999999 9999999999


Q ss_pred             cccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcc
Q 009109          405 IFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYH  484 (543)
Q Consensus       405 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~  484 (543)
                      +||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++
T Consensus       410 iFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~  487 (515)
T 2d4e_A          410 IFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREG  487 (515)
T ss_dssp             CCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBS
T ss_pred             ccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccc
Confidence            99999999999999999999999999999999999999999999999999999998754  5688999999999999999


Q ss_pred             hHHHHHHhhhceEEEEec
Q 009109          485 GKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       485 g~~~~~~~~~~k~v~~~~  502 (543)
                      |.+|+++|++.|+|+++.
T Consensus       488 G~~gl~~~~~~K~v~~~~  505 (515)
T 2d4e_A          488 GTYALDFYTDLKTIALPL  505 (515)
T ss_dssp             HHHHHHHHEEEEEEEEES
T ss_pred             hHHHHHHhCceeEEEEcC
Confidence            999999999999998864

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=100.00  E-value=3.6e-100  Score=815.49  Aligned_cols=478  Identities=17%  Similarity=0.242  Sum_probs=438.8

Q ss_pred             cccchhhhhhcccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhh
Q 009109            4 PSVRAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSR   83 (543)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w   83 (543)
                      +.+.+|+.  ++.....++|||| +|+.  ++.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|
T Consensus        10 ~~~~~~~~--~~~~~~~~~~i~g-~~~~--~~~~~~v~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w   75 (500)
T 2j6l_A           10 PQYAWLKE--LGLREENEGVYNG-SWGG--RGEVITTY--------CPANNEPIARV-RQASVADYEETVKKAREAWKIW   75 (500)
T ss_dssp             GGGGGGGG--GTCCSEEECEESS-SEEC--CSCEEEEE--------ETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHh--cCCCCCCCceECC-EEec--CCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHh
Confidence            56778888  6677999999999 9994  56667766        88899999765 9999999999999999999999


Q ss_pred             cCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcc
Q 009109           84 KTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSA  163 (543)
Q Consensus        84 ~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (543)
                      +.++..+|.++|++++++|++++++|++++++|+|||..++. .|+..+++.++++++.++++.+.. ..  ....+...
T Consensus        76 ~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~-~~--~~~~~~~~  151 (500)
T 2j6l_A           76 ADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPI-LP--SERSGHAL  151 (500)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBE-EC--CSSTTEEE
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cc--ccCCCcee
Confidence            999999999999999999999999999999999999999996 599999999999998877653321 11  11122345


Q ss_pred             eEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhh----h-cCCCceEeecCChHHH
Q 009109          164 EIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED----Y-VDNSAVRVVEGAVAET  238 (543)
Q Consensus       164 ~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~----a-lP~gvv~vv~g~~~~~  238 (543)
                      +++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++.+    + +|+|+||+|+|+.+.+
T Consensus       152 ~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g  231 (500)
T 2j6l_A          152 IEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIG  231 (500)
T ss_dssp             EEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHH
T ss_pred             EEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHH
Confidence            7889999999999999999999999999999999999999999999999999988765    4 9999999999987889


Q ss_pred             HHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEE
Q 009109          239 SALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII  317 (543)
Q Consensus       239 ~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~  317 (543)
                      +.|++|+ +|+|+||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||
T Consensus       232 ~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvl  310 (500)
T 2j6l_A          232 TAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAV-GTAGQRCTTARRLF  310 (500)
T ss_dssp             HHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEE
T ss_pred             HHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCcCCCcEEE
Confidence            9999996 999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             EeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCC
Q 009109          318 TTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDV  394 (543)
Q Consensus       318 V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~  394 (543)
                      ||+++||+|+++|+++++++++|||.+ ++++|||+++.+++++.++++++.+ ++++++||.. +..|+|++|||+.++
T Consensus       311 V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v  390 (500)
T 2j6l_A          311 IHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGL  390 (500)
T ss_dssp             EETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESC
T ss_pred             EcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECC
Confidence            999999999999999999999999987 7799999999999999999999875 6799999976 346899999999999


Q ss_pred             CCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHH--hhccceeEEECCCcccCCCCCCCc
Q 009109          395 PDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFV--QNISAGGIVFNDTIVHTTVSSLPF  472 (543)
Q Consensus       395 ~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~~pf  472 (543)
                      +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++  +++++|+|+||++.. ...+.+||
T Consensus       391 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~-~~~~~~Pf  469 (500)
T 2j6l_A          391 GHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTS-GAEIGGAF  469 (500)
T ss_dssp             CTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTT-CCCTTSEE
T ss_pred             CCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCc-cCCCCCCc
Confidence            999999999999999999999999999999999999999999999999999999  779999999998754 34578999


Q ss_pred             ccCCCCCCCCcchHHHHHHhhhceEEEEe
Q 009109          473 GGVGESGMGSYHGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       473 GG~~~SG~G~~~g~~~~~~~~~~k~v~~~  501 (543)
                      ||+|.||+|+++|.+|+++|++.|+|+++
T Consensus       470 GG~k~SG~G~~~g~~~~~~f~~~k~v~~~  498 (500)
T 2j6l_A          470 GGEKHTGGGRESGSDAWKQYMRRSTCTIN  498 (500)
T ss_dssp             CCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred             CCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence            99999999999999999999999999874

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=100.00  E-value=3e-100  Score=811.88  Aligned_cols=454  Identities=26%  Similarity=0.428  Sum_probs=418.9

Q ss_pred             eeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHH
Q 009109           22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANM  101 (543)
Q Consensus        22 ~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~  101 (543)
                      +|||| +|+.+  ++ ++++        ||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++++++
T Consensus         2 ~~I~G-~~~~~--~~-~~~~--------nP~tg~~i~~~-~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~   68 (486)
T 3pqa_A            2 MFIDG-KWINR--ED-MDVI--------NPYSLEVIKKI-PALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQ   68 (486)
T ss_dssp             --------CCC--CC-EEEE--------CTTTCCEEEEE-CCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHH
T ss_pred             eeECC-EEecC--CC-eEEE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Confidence            69999 99986  44 7777        88899999765 9999999999999999999999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCch
Q 009109          102 IEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNY  181 (543)
Q Consensus       102 l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~  181 (543)
                      |+++.++|++++++|+|||..+++. |+..+++.++++++.+++|.+.. ..    ..+...+++++|+|||++|+||||
T Consensus        69 l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~-~~----~~~~~~~~~~~P~GVv~~I~PwN~  142 (486)
T 3pqa_A           69 IKEKKEELAKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEV-IP----SDDRLIFTRREPVGIVGAITPFNF  142 (486)
T ss_dssp             HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEE-EC----CTTEEEEEEEEECSEEEEEECSSS
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCce-ec----CCCceeEEEEccccEEEEECCCch
Confidence            9999999999999999999999984 99999999999999998875432 11    124567899999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-----cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCC
Q 009109          182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-----VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS  254 (543)
Q Consensus       182 P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-----lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS  254 (543)
                      |+.+.++++++||++||+||+|||+.+|+++.++++++.++     +|+|+||+|+| +.+.++.|++|+ ||+|+||||
T Consensus       143 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS  222 (486)
T 3pqa_A          143 PLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGS  222 (486)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESC
T ss_pred             HHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECC
Confidence            99999999999999999999999999999999999999988     99999999999 556799999996 999999999


Q ss_pred             hHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH
Q 009109          255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL  334 (543)
Q Consensus       255 ~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~  334 (543)
                      +++|+.|++.++  +||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|++++
T Consensus       223 ~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~  299 (486)
T 3pqa_A          223 SKVGELITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKA  299 (486)
T ss_dssp             HHHHHHHHHHCC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHcC--CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHH-hcCCCCccCCcEEEEeHHHHHHHHHHHHHHH
Confidence            999999999887  8999999999999999999999999999999999 9999999999999999999999999999999


Q ss_pred             HhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeee
Q 009109          335 KEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI  412 (543)
Q Consensus       335 ~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v  412 (543)
                      +++++|||.+ ++++||++++.+++++.++++++.+ ++++++||..  .|+|++|||+ +++++|++++||+||||++|
T Consensus       300 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v  376 (486)
T 3pqa_A          300 KVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPI  376 (486)
T ss_dssp             HTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEE
T ss_pred             HhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEE
Confidence            9999999976 6799999999999999999999875 6799999965  5899999999 99999999999999999999


Q ss_pred             eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHh
Q 009109          413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF  492 (543)
Q Consensus       413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~  492 (543)
                      ++|+| ||||+++|+++|||++||||+|.++++++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++|
T Consensus       377 ~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~~PfGG~k~SG~Gr~~g~~gl~~f  454 (486)
T 3pqa_A          377 IRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLF-RQDNMPFGGVKKSGLGREGVKYAMEEM  454 (486)
T ss_dssp             EEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTC-CCTTSCBCCSGGGEESCBSHHHHHHHT
T ss_pred             EEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCc-CCCCCCCCCcCcCcCCCCCcHHHHHHh
Confidence            99999 9999999999999999999999999999999999999999998763 345899999999999999999999999


Q ss_pred             hhceEEEEec
Q 009109          493 SHKKAVLYRS  502 (543)
Q Consensus       493 ~~~k~v~~~~  502 (543)
                      ++.|+|+++.
T Consensus       455 ~~~k~v~~~~  464 (486)
T 3pqa_A          455 SNIKTIIISK  464 (486)
T ss_dssp             EEEEEEEEEC
T ss_pred             hceEEEEEcC
Confidence            9999998865

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=100.00  E-value=5.9e-100  Score=815.36  Aligned_cols=465  Identities=22%  Similarity=0.356  Sum_probs=417.8

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a   99 (543)
                      .++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++
T Consensus        13 ~~~~I~G-~~~~~~~~~~~~~~--------~P~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a   82 (508)
T 3r64_A           13 TKHLIGG-QWVEGNSDRISTNI--------NPYDDSVIAES-KQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAA   82 (508)
T ss_dssp             TSEEETT-EEECCCSSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred             cceeECC-EEecCCCCCEEEeE--------CCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence            4799999 99999888888888        88899999766 99999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW  179 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~  179 (543)
                      ++|+++.++|++++++|+|||..+++. |+..+++.++++++..+.+.+  ..+. ....+...+++++|+|||++|+||
T Consensus        83 ~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~--~~~~-~~~~~~~~~~~~~P~GVv~~I~Pw  158 (508)
T 3r64_A           83 ELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG--RISP-SNTPGKENRVYRVAKGVVGVISPW  158 (508)
T ss_dssp             HHHHHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE--EEEC-CSSTTEEEEEEEEECSEEEEECCS
T ss_pred             HHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC--cccc-cCCCCceeEEEEecceEEEEECCC
Confidence            999999999999999999999999986 999999999999876655322  1111 111235678999999999999999


Q ss_pred             chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHH-HHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCCh
Q 009109          180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS-SLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP  255 (543)
Q Consensus       180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~-~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~  255 (543)
                      |||+.+.++++++||++||+||+|||+.+|+++ .++++++.++ +|+|+||+|+| +.+.+++|++|+ +|+|+||||+
T Consensus       159 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~  238 (508)
T 3r64_A          159 NFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGST  238 (508)
T ss_dssp             SSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCH
T ss_pred             cchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCH
Confidence            999999999999999999999999999999999 9999999999 99999999999 578999999996 9999999999


Q ss_pred             HHHHHHHHHHhc--ccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHH
Q 009109          256 RVGRIVMAAAAK--HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE  333 (543)
Q Consensus       256 ~~g~~i~~~a~~--~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~  333 (543)
                      ++|+.|++.+++  ++||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|+++
T Consensus       239 ~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~  317 (508)
T 3r64_A          239 PVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEA  317 (508)
T ss_dssp             HHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TSTTCTTTCCSEEEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHH-hcCCCCcccCcEEEEehhHHHHHHHHHHHH
Confidence            999999999998  99999999999999999999999999999999999 999999999999999999999999999999


Q ss_pred             HHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceee
Q 009109          334 LKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP  411 (543)
Q Consensus       334 ~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~  411 (543)
                      ++++++|||.+ ++++||++++.+++++.++++++.+ ++++++||..  .|+|++|||+.+++++|++++||+||||++
T Consensus       318 ~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~  395 (508)
T 3r64_A          318 VKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLIS  395 (508)
T ss_dssp             HHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEE
T ss_pred             HHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEE
Confidence            99999999986 6799999999999999999999875 5799999976  689999999999999999999999999999


Q ss_pred             eeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHH
Q 009109          412 IVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDA  491 (543)
Q Consensus       412 v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~  491 (543)
                      |++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++
T Consensus       396 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~  474 (508)
T 3r64_A          396 VLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEE  474 (508)
T ss_dssp             EEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC---------------------CCCHHHHHHH
T ss_pred             EEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHH
Confidence            99999999999999999999999999999999999999999999999998764 57889999999999999999999999


Q ss_pred             hhhceEEEEec
Q 009109          492 FSHKKAVLYRS  502 (543)
Q Consensus       492 ~~~~k~v~~~~  502 (543)
                      |++.|+|+++.
T Consensus       475 ft~~k~v~~~~  485 (508)
T 3r64_A          475 FTTDRWIGIKR  485 (508)
T ss_dssp             TEEEEEEEEEC
T ss_pred             hhceEEEEEec
Confidence            99999998875

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=100.00  E-value=8.3e-100  Score=808.06  Aligned_cols=457  Identities=22%  Similarity=0.331  Sum_probs=423.6

Q ss_pred             cccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhh
Q 009109           46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF  125 (543)
Q Consensus        46 ~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~  125 (543)
                      +.+.||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+|||..+++
T Consensus         6 ~~~~nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~   84 (484)
T 3ros_A            6 YQSVNPYTNEAFASY-DNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK   84 (484)
T ss_dssp             CEEEETTTTEEEEEC-CCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred             cceeCCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence            455699999999765 9999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCC
Q 009109          126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS  205 (543)
Q Consensus       126 ~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps  205 (543)
                       .|+..+++.++++++.+++|.+.....    ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus        85 -~ev~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps  159 (484)
T 3ros_A           85 -EEVELCVSICNYYADHGPEMLKPTKLN----SDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHA  159 (484)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHTSCEEEC----CTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECC
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCCeecc----CCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence             599999999999999999987654321    134578999999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhhh-cCCCceEeecCCh-HHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcE
Q 009109          206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA  282 (543)
Q Consensus       206 ~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~-~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~  282 (543)
                      +.+|+++.+|++++.++ +|+|+||+|+|+. +.++ |++|+ ||+|+||||+++|+.|++.+++++||+++|||||||+
T Consensus       160 ~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~  238 (484)
T 3ros_A          160 HNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAF  238 (484)
T ss_dssp             TTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEE
T ss_pred             CCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcc
Confidence            99999999999999999 9999999999954 5567 99996 9999999999999999999999999999999999999


Q ss_pred             EEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHH
Q 009109          283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLA  361 (543)
Q Consensus       283 iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~  361 (543)
                      ||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.
T Consensus       239 iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~  317 (484)
T 3ros_A          239 IVLDDADPQVLRNVLNDART-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLE  317 (484)
T ss_dssp             EECTTCCHHHHHHHHTTTTT-GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHH
T ss_pred             eeCCCCCHHHHHHHHHHHHh-cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHH
Confidence            99999999999999999999 99999999999999999999999999999999999999986 67999999999999999


Q ss_pred             HHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecC
Q 009109          362 SLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSD  439 (543)
Q Consensus       362 ~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~  439 (543)
                      ++|+++.+ ++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus       318 ~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~  397 (484)
T 3ros_A          318 AQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGS  397 (484)
T ss_dssp             HHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECS
T ss_pred             HHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECC
Confidence            99999875 6799999975 357999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEecCCCCCCCcCC
Q 009109          440 DEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYP  512 (543)
Q Consensus       440 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~~  512 (543)
                      |.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++|++.|+|+++.......+.|.
T Consensus       398 d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~~~~  468 (484)
T 3ros_A          398 DIDRAKKVSAQIETGMTVINGRWI--TSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTKNNQAENLYF  468 (484)
T ss_dssp             CHHHHHHHHHHSCSSCCEETSCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGGGC-------
T ss_pred             CHHHHHHHHHhCccceEEECCCCC--CCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCCCChhhhhee
Confidence            999999999999999999999653  57899999999999999999999999999999998764444444453

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=100.00  E-value=1.6e-99  Score=813.44  Aligned_cols=467  Identities=21%  Similarity=0.328  Sum_probs=432.8

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCC-chhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSA-TMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS   97 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~-tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~   97 (543)
                      ..++|||| +|+.+  +.+++++        ||. ||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++
T Consensus        37 ~~~~~i~G-~~~~~--~~~~~~~--------nP~~t~~~i~~~-~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~  104 (516)
T 1uzb_A           37 HYPLYIGG-EWVDT--KERMVSL--------NPSAPSEVVGTT-AKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLK  104 (516)
T ss_dssp             EECEEETT-EEECC--SSEEEEE--------ETTEEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred             ccceeECC-EEecC--CCeEEEE--------CCCCCCcEEEEE-eCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence            34789999 99964  4566666        888 69999766 999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEc
Q 009109           98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS  177 (543)
Q Consensus        98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~  177 (543)
                      ++++|++++++|++++++|+|||..+++ .|+..+++.++++++.++++.++... . ....+...++.++|+|||++|+
T Consensus       105 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~-~-~~~~~~~~~~~~~P~GVv~~I~  181 (516)
T 1uzb_A          105 AAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVE-V-VPYPGEDNESFYVPLGAGVVIA  181 (516)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCC-C-CCCTTEEEEEEEEECCEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccc-c-cCCCCceEEEEEeccceEEEEC
Confidence            9999999999999999999999999998 59999999999999999988764321 0 1112345688999999999999


Q ss_pred             CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCC
Q 009109          178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS  254 (543)
Q Consensus       178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS  254 (543)
                      |||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.+.+|++|+ ||+|+||||
T Consensus       182 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS  261 (516)
T 1uzb_A          182 PWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGS  261 (516)
T ss_dssp             CSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESC
T ss_pred             CCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCC
Confidence            999999999999999999999999999999999999999999999 99999999999 678899999997 999999999


Q ss_pred             hHHHHHHHHHHh------cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHH
Q 009109          255 PRVGRIVMAAAA------KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLID  328 (543)
Q Consensus       255 ~~~g~~i~~~a~------~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~  328 (543)
                      +++|+.|++.++      +++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|++
T Consensus       262 ~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~  340 (516)
T 1uzb_A          262 LEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLE  340 (516)
T ss_dssp             HHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEchHHHHHHHH
Confidence            999999999998      789999999999999999999999999999999999 9999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECccc-CCCCceeeceEeeCCCCCCccccccccc
Q 009109          329 SLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFG  407 (543)
Q Consensus       329 ~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fg  407 (543)
                      +|+++++++++|||++++++|||+++.+++++.++++++.+.+++++||.. +..|+|++|||+.+++++|++++||+||
T Consensus       341 ~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFG  420 (516)
T 1uzb_A          341 RVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFG  420 (516)
T ss_dssp             HHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCS
T ss_pred             HHHHHHHhccCCCCccccccCCCCCHHHHHHHHHHHHHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccC
Confidence            999999999999994378999999999999999999998776689999976 3469999999999999999999999999


Q ss_pred             ceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCC-cchH
Q 009109          408 PLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGS-YHGK  486 (543)
Q Consensus       408 Pvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~  486 (543)
                      ||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+++.+...+.+||||+|.||+|+ .+|.
T Consensus       421 PVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~  500 (516)
T 1uzb_A          421 PVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGAL  500 (516)
T ss_dssp             SEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSH
T ss_pred             ceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchH
Confidence            999999999999999999999999999999999999999999999999999997766667889999999999995 6889


Q ss_pred             HHHHHhhhceEEEEe
Q 009109          487 FSFDAFSHKKAVLYR  501 (543)
Q Consensus       487 ~~~~~~~~~k~v~~~  501 (543)
                      +++++|++.|+|+++
T Consensus       501 ~~l~~f~~~k~v~~~  515 (516)
T 1uzb_A          501 DYLRLFLEMKAVAER  515 (516)
T ss_dssp             HHHHTTEEEEEEEEE
T ss_pred             HHHHHcCCeeEEEec
Confidence            999999999999763

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=100.00  E-value=8.1e-100  Score=810.24  Aligned_cols=463  Identities=24%  Similarity=0.383  Sum_probs=431.6

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a   99 (543)
                      .++|||| +|+.+.  .+++++        ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++
T Consensus        13 ~~~~i~g-~~~~~~--~~~~~~--------~P~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a   80 (487)
T 2w8n_A           13 TDSFVGG-RWLPAA--ATFPVQ--------DPASGAALGMV-ADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWY   80 (487)
T ss_dssp             CSEEETT-EEECCS--CEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred             cCeeECC-EEecCC--CeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence            5789999 999774  566666        88899999666 99999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW  179 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~  179 (543)
                      ++|++++++|++++++|+|||..+++. |+..+++.++++++.++++.. +....  ...+...+++++|+|||++|+||
T Consensus        81 ~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g-~~~~~--~~~~~~~~~~~~P~GVv~~I~Pw  156 (487)
T 2w8n_A           81 NLMIQNKDDLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYG-DIIHT--PAKDRRALVLKQPIGVAAVITPW  156 (487)
T ss_dssp             HHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCC-EEECC--SCTTCEEEEEEEECCEEEEECCS
T ss_pred             HHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-ccccc--CCCCceeEEEEecceEEEEECCC
Confidence            999999999999999999999999985 999999999999998877432 21111  12345678999999999999999


Q ss_pred             chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeec---C-ChHHHHHHHhCC-CCEEEEeC
Q 009109          180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVE---G-AVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~---g-~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      |||+.+.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+   | +.+.++.|++|+ +|+|+|||
T Consensus       157 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTG  236 (487)
T 2w8n_A          157 NFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTG  236 (487)
T ss_dssp             SSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEE
T ss_pred             cchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeC
Confidence            9999999999999999999999999999999999999999999 9999999999   8 677899999997 99999999


Q ss_pred             ChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHH
Q 009109          254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE  333 (543)
Q Consensus       254 S~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~  333 (543)
                      |+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++
T Consensus       237 S~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~  315 (487)
T 2w8n_A          237 STTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKF-RNTGQTCVCSNQFLVQRGIHDAFVKAFAEA  315 (487)
T ss_dssp             CHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHT-CCCSCCCSEEEEEEEEHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCccccCCEEEEcccHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999 999999999999999999999999999999


Q ss_pred             HHh-hcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCc-eeeceEeeCCCCCCcccccccccce
Q 009109          334 LKE-FFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQL-KIAPTILLDVPDDSTIMKEEIFGPL  409 (543)
Q Consensus       334 ~~~-l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~-~~~Ptvl~~~~~~~~~~~~E~fgPv  409 (543)
                      +++ +++|||.+ ++++||++++.+++++.++++++.+ ++++++||..+..|+ |++|||+.+++++|++++||+||||
T Consensus       316 ~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPV  395 (487)
T 2w8n_A          316 MKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPL  395 (487)
T ss_dssp             HHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSE
T ss_pred             HHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccce
Confidence            999 99999986 6799999999999999999999875 579999998755688 9999999999999999999999999


Q ss_pred             eeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHH
Q 009109          410 LPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSF  489 (543)
Q Consensus       410 l~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~  489 (543)
                      ++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..+  .+.+||||+|.||+|+++|.+|+
T Consensus       396 l~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~~~SG~G~~~G~~~l  473 (487)
T 2w8n_A          396 APVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLIS--SVECPFGGVKQSGLGREGSKYGI  473 (487)
T ss_dssp             EEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCC--CTTSCBCCSGGGEESCBSTTTGG
T ss_pred             EEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCC--CCCCCCCCCCCCCcCCCchHHHH
Confidence            9999999999999999999999999999999999999999999999999998763  46799999999999999999999


Q ss_pred             HHhhhceEEEEe
Q 009109          490 DAFSHKKAVLYR  501 (543)
Q Consensus       490 ~~~~~~k~v~~~  501 (543)
                      ++|++.|+|+.+
T Consensus       474 ~~f~~~k~v~~~  485 (487)
T 2w8n_A          474 DEYLELKYVCYG  485 (487)
T ss_dssp             GGGEEEEEEEEC
T ss_pred             HHhcCccEEEEe
Confidence            999999999864

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=1.7e-99  Score=809.32  Aligned_cols=467  Identities=21%  Similarity=0.325  Sum_probs=412.8

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI   98 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~   98 (543)
                      ..++|||| +|+.+.++++++++        ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|+++
T Consensus         6 ~~~~~i~g-~~~~~~~~~~~~~~--------~P~t~~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~   75 (485)
T 4dng_A            6 LNKSFING-KWTGGESGRTEDIL--------NPYDQSVITTA-SLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKA   75 (485)
T ss_dssp             CCSEEETT-EEECCSSSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred             ccceeECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHH
Confidence            45799999 99999888888888        88899999766 9999999999999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST  178 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p  178 (543)
                      +++|+++.++|++++++|+|||+.+++. |+..+++.++++++..+.. .+..... ....+...+++++|+|||++|+|
T Consensus        76 a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~-~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~P  152 (485)
T 4dng_A           76 RGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGEL-GGVKEVP-SDIEGKTNKIYRLPLGVISSISP  152 (485)
T ss_dssp             HHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGC-SCEECCC-CSSTTEEEEEEEEECCEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHh-CCeeccc-cCCCCceEEEEEecceEEEEECC
Confidence            9999999999999999999999999986 9999999999999987653 2222111 11223567899999999999999


Q ss_pred             CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHH-HHHHHHHhhh-cCCCceEeecCC-hHHHHHHHhCC-CCEEEEeCC
Q 009109          179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS-SLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGS  254 (543)
Q Consensus       179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~-~~l~~~l~~a-lP~gvv~vv~g~-~~~~~~L~~~~-v~~v~ftGS  254 (543)
                      ||||+.+.++++++||++||+||+|||+.+|+++ .++++++.++ +|+|+||+|+|+ .+.++.|++|+ +|+|+||||
T Consensus       153 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS  232 (485)
T 4dng_A          153 FNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGS  232 (485)
T ss_dssp             SSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEEC
T ss_pred             CccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECC
Confidence            9999999999999999999999999999999999 9999999999 999999999995 45899999996 999999999


Q ss_pred             hHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH
Q 009109          255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL  334 (543)
Q Consensus       255 ~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~  334 (543)
                      +++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|++++
T Consensus       233 ~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~  311 (485)
T 4dng_A          233 TAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTARV  311 (485)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHT-TCC----CCEEEEEEEHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCccccCCEEEEeHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999 9999999999999999999999999999999


Q ss_pred             HhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeee
Q 009109          335 KEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI  412 (543)
Q Consensus       335 ~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v  412 (543)
                      +++++|+|.+ .+++||++++.+++++.++++++.+ ++++++||..  .|+|++|||+.+++++|++++||+||||++|
T Consensus       312 ~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v  389 (485)
T 4dng_A          312 KQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIATI  389 (485)
T ss_dssp             HHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEEE
T ss_pred             HhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC--CCcEECCEEEecCCCCChhhcCccccceEEE
Confidence            9999999986 6799999999999999999999875 6799999976  6899999999999999999999999999999


Q ss_pred             eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHh
Q 009109          413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF  492 (543)
Q Consensus       413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~  492 (543)
                      ++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+++.+ ..+.+||||+|.||+|++||.+++++|
T Consensus       390 ~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~  468 (485)
T 4dng_A          390 IKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEF  468 (485)
T ss_dssp             EEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC-----------------------CHHHHHHH
T ss_pred             EEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHh
Confidence            9999999999999999999999999999999999999999999999998754 578899999999999999999999999


Q ss_pred             hhceEEEEec
Q 009109          493 SHKKAVLYRS  502 (543)
Q Consensus       493 ~~~k~v~~~~  502 (543)
                      ++.|+|+++.
T Consensus       469 t~~k~v~~~~  478 (485)
T 4dng_A          469 TVTKWISIQK  478 (485)
T ss_dssp             EEEEEEEEEC
T ss_pred             hceEEEEEec
Confidence            9999998864

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=100.00  E-value=8.4e-100  Score=812.08  Aligned_cols=472  Identities=21%  Similarity=0.355  Sum_probs=433.0

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh-hhcCCCHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN-SRKTKSYEWRMSQIQS   97 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~-~w~~~~~~~R~~iL~~   97 (543)
                      ..++|||| +|+.+.  .+++++        ||.||++++.+ +.++.+|+++|+++|++||+ .|+.++..+|.++|++
T Consensus        18 ~~~~~i~g-~~~~~~--~~~~v~--------nP~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~   85 (501)
T 1uxt_A           18 VYPSYLAG-EWGGSG--QEIEVK--------SPIDLATIAKV-ISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRK   85 (501)
T ss_dssp             EECEECSS-SEECCS--CEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHH
T ss_pred             ccceeECC-EEecCC--CeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHH
Confidence            45799999 999873  566666        88899999666 99999999999999999999 9999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCC--CCcceEEeecceEEEE
Q 009109           98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTY--PSSAEIISEPLGVVLV  175 (543)
Q Consensus        98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~  175 (543)
                      ++++|++++++|++++++|+|||..+++ .|+..+++.++++++.++++.. +..+......  +...+++++|+|||++
T Consensus        86 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~  163 (501)
T 1uxt_A           86 AADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAA  163 (501)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEE
T ss_pred             HHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEE
Confidence            9999999999999999999999999998 5999999999999988887643 2111110011  2256899999999999


Q ss_pred             EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeC
Q 009109          176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      |+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.++.|++|+ +|+|+|||
T Consensus       164 I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTG  243 (501)
T 1uxt_A          164 ITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTG  243 (501)
T ss_dssp             ECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEES
T ss_pred             ECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeC
Confidence            99999999999999999999999999999999999999999999999 99999999999558899999996 99999999


Q ss_pred             ChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHH
Q 009109          254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE  333 (543)
Q Consensus       254 S~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~  333 (543)
                      |+++|+.|++.++  +||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|+++
T Consensus       244 S~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~  320 (501)
T 1uxt_A          244 STEVGERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKR  320 (501)
T ss_dssp             CHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-cCCCCCCcCCcEEEeccchHHHHHHHHHHH
Confidence            9999999999888  9999999999999999999999999999999999 999999999999999999999999999999


Q ss_pred             HHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCC-ceeeceEeeCCC---CCCccccccccc
Q 009109          334 LKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQ-LKIAPTILLDVP---DDSTIMKEEIFG  407 (543)
Q Consensus       334 ~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g-~~~~Ptvl~~~~---~~~~~~~~E~fg  407 (543)
                      ++++++|||.+ ++++||++++.+++++.++++++.+ ++++++||..  .| +|++|||+.+++   ++|++++||+||
T Consensus       321 ~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFG  398 (501)
T 1uxt_A          321 LSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFA  398 (501)
T ss_dssp             HHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCS
T ss_pred             HHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccC
Confidence            99999999986 7899999999999999999999875 5699999976  68 999999999999   999999999999


Q ss_pred             ceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHH
Q 009109          408 PLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKF  487 (543)
Q Consensus       408 Pvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~  487 (543)
                      ||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+++ +...+.+||||+|.||+|+++|.+
T Consensus       399 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~  477 (501)
T 1uxt_A          399 PVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGY  477 (501)
T ss_dssp             SEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTT
T ss_pred             ceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHH
Confidence            9999999999999999999999999999999999999999999999999999874 346788999999999999999999


Q ss_pred             HHHHhhhceEEEEecCCCCCCCcC
Q 009109          488 SFDAFSHKKAVLYRSFNGDSTTRY  511 (543)
Q Consensus       488 ~~~~~~~~k~v~~~~~~~~~~~~~  511 (543)
                      ++++|++.|+|+++. .....++|
T Consensus       478 ~l~~f~~~k~v~~~~-~~~~~~~~  500 (501)
T 1uxt_A          478 AVEAVTAYKTIVFNY-KGKGVWKY  500 (501)
T ss_dssp             THHHHEEEEEEEEEC-TTSSSSSC
T ss_pred             HHHHhCceeEEEEec-CCCccccc
Confidence            999999999998864 23445554

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=100.00  E-value=1.5e-99  Score=808.31  Aligned_cols=461  Identities=24%  Similarity=0.408  Sum_probs=411.7

Q ss_pred             cccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 009109           18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS   97 (543)
Q Consensus        18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~   97 (543)
                      ...++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++
T Consensus         6 ~~~~~~i~G-~~~~~~~~~~~~~~--------~P~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~   75 (478)
T 3ty7_A            6 DYTKQYING-EWVESNSNETIEVI--------NPATEEVIGKV-AKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDK   75 (478)
T ss_dssp             ECCEEEETT-EEEECSSSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             hhhhheECC-EEecCCCCCeEEeE--------CCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence            457899999 99999888888888        88899999766 999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEc
Q 009109           98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS  177 (543)
Q Consensus        98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~  177 (543)
                      ++++|+++.++|++++++|+|||..+++..|+..+++.++++++.++++....        .+...+++++|+|||++|+
T Consensus        76 ~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~  147 (478)
T 3ty7_A           76 IVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLIT  147 (478)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEEC
T ss_pred             HHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEEC
Confidence            99999999999999999999999999955699999999999999988865422        1245788999999999999


Q ss_pred             CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCC
Q 009109          178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS  254 (543)
Q Consensus       178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS  254 (543)
                      |||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|+.|+ +|+|+||||
T Consensus       148 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS  227 (478)
T 3ty7_A          148 PWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGS  227 (478)
T ss_dssp             CSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSC
T ss_pred             CCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECc
Confidence            999999999999999999999999999999999999999999999 99999999999 668999999996 999999999


Q ss_pred             hHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH
Q 009109          255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL  334 (543)
Q Consensus       255 ~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~  334 (543)
                      +++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++
T Consensus       228 ~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~  306 (478)
T 3ty7_A          228 GPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVV-NNTGQVCTAGTRVLVPNKIKDAFLAELKEQF  306 (478)
T ss_dssp             HHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEETTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHH-HhCCCCccCCCeEEEcHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999 9999999999999999999999999999999


Q ss_pred             HhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-C---CCCceeeceEeeCCCCCCcccccccccc
Q 009109          335 KEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-D---EKQLKIAPTILLDVPDDSTIMKEEIFGP  408 (543)
Q Consensus       335 ~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgP  408 (543)
                      +++++|||.+ ++++||++++.+++++.++++++.+ ++++++||.. +   ..|+|++|||+.+++++|++++||+|||
T Consensus       307 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGP  386 (478)
T 3ty7_A          307 SQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGP  386 (478)
T ss_dssp             HTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSS
T ss_pred             HhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECc
Confidence            9999999987 6799999999999999999999864 7899999943 2   3689999999999999999999999999


Q ss_pred             eeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHH
Q 009109          409 LLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS  488 (543)
Q Consensus       409 vl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~  488 (543)
                      |++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+ .  ...+.+||||+|.||+|+++|.+|
T Consensus       387 vl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~--~~~~~~PfGG~k~SG~G~~~G~~~  463 (478)
T 3ty7_A          387 VMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-A--GRKPDLPFGGYKQSGLGREWGDYG  463 (478)
T ss_dssp             EEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-C--C----------------------C
T ss_pred             eeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHH
Confidence            9999999999999999999999999999999999999999999999999998 2  356789999999999999999999


Q ss_pred             HHHhhhceEEEE
Q 009109          489 FDAFSHKKAVLY  500 (543)
Q Consensus       489 ~~~~~~~k~v~~  500 (543)
                      +++||+.|+|+.
T Consensus       464 l~~~t~~k~v~~  475 (478)
T 3ty7_A          464 IEEFLEVKSIAG  475 (478)
T ss_dssp             CGGGEEEEEEET
T ss_pred             HHHhcCeEEEEE
Confidence            999999999873

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=100.00  E-value=4.3e-99  Score=803.61  Aligned_cols=458  Identities=23%  Similarity=0.380  Sum_probs=427.3

Q ss_pred             ceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 009109           21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN  100 (543)
Q Consensus        21 ~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~  100 (543)
                      ++|||| +|+.+.+  +++++        ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|+++++
T Consensus         6 ~~~i~g-~~~~~~~--~~~~~--------~P~tg~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~   73 (475)
T 1euh_A            6 KNYVNG-EWKLSEN--EIKIY--------EPASGAELGSV-PAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVAD   73 (475)
T ss_dssp             CEEETT-EEECCSS--EEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred             ceeECC-EEecCCC--ceEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Confidence            689999 9998744  66666        88899999766 999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCC----Ccc-eEEeecceEEEE
Q 009109          101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYP----SSA-EIISEPLGVVLV  175 (543)
Q Consensus       101 ~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~  175 (543)
                      +|+++.++|++++++|+|||..+++ .|+..+++.++++++.++++.+.. ....  ..+    ... ++.++|+|||++
T Consensus        74 ~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~  149 (475)
T 1euh_A           74 ILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEV-LEGG--SFEAASKKKIAVVRREPVGLVLA  149 (475)
T ss_dssp             HHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEE-EEGG--GTCGGGTTEEEEEEEEECSEEEE
T ss_pred             HHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCc-ccCC--CCCccccceeeEEEEeccceEEE
Confidence            9999999999999999999999997 599999999999999888765432 1111  123    355 899999999999


Q ss_pred             EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCC-hHHHHHHHhCC-CCEEEEe
Q 009109          176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYT  252 (543)
Q Consensus       176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~-~~~~~~L~~~~-v~~v~ft  252 (543)
                      |+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+ .+.++.|++|+ +|+|+||
T Consensus       150 I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fT  229 (475)
T 1euh_A          150 ISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFT  229 (475)
T ss_dssp             ECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred             ECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEE
Confidence            99999999999999999999999999999999999999999999999 999999999995 56899999996 9999999


Q ss_pred             CChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHH
Q 009109          253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN  332 (543)
Q Consensus       253 GS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~  332 (543)
                      ||+++|+.|++.++  +||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++
T Consensus       230 GS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~  306 (475)
T 1euh_A          230 GSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIRE  306 (475)
T ss_dssp             SCHHHHHHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCCCCcEEEEehhHHHHHHHHHHH
Confidence            99999999999887  8999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceee
Q 009109          333 ELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP  411 (543)
Q Consensus       333 ~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~  411 (543)
                      +++++++|||.+++++||++++.+++++.++++++.+ ++++++||..  .|+|++|||+.+++++|++++||+||||++
T Consensus       307 ~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~  384 (475)
T 1euh_A          307 KVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPVLP  384 (475)
T ss_dssp             HHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEE
T ss_pred             HHHhccCCCccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccceEE
Confidence            9999999999888899999999999999999999865 5799999876  589999999999999999999999999999


Q ss_pred             eeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECC-CcccCCCCCCCcccCCCCCCCCcchHHHHH
Q 009109          412 IVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFND-TIVHTTVSSLPFGGVGESGMGSYHGKFSFD  490 (543)
Q Consensus       412 v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~-~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~  490 (543)
                      |++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+ +..  ..+.+||||+|.||+|+++|.+|++
T Consensus       385 v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~  462 (475)
T 1euh_A          385 IIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQR--GTDNFPFLGAKKSGAGIQGVKYSIE  462 (475)
T ss_dssp             EEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCC--CSTTSCBCCEETTEESCBSHHHHHH
T ss_pred             EEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCC--CCCCCCcCCCCCCCcCCCccHHHHH
Confidence            9999999999999999999999999999999999999999999999998 654  2678999999999999999999999


Q ss_pred             HhhhceEEEEe
Q 009109          491 AFSHKKAVLYR  501 (543)
Q Consensus       491 ~~~~~k~v~~~  501 (543)
                      +|++.|+|+++
T Consensus       463 ~~~~~k~v~~~  473 (475)
T 1euh_A          463 AMTTVKSVVFD  473 (475)
T ss_dssp             HTEEEEEEEEE
T ss_pred             HhCCeeEEEEe
Confidence            99999999874

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=1.3e-98  Score=801.45  Aligned_cols=466  Identities=22%  Similarity=0.310  Sum_probs=430.7

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a   99 (543)
                      .++|||| +|+.+.++.+++++        ||.||++++.+ +.++.+|+++|+++|++||+.|+.+|..+|.++|++++
T Consensus         6 ~~~~i~g-~~~~~~~~~~~~~~--------~P~t~~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a   75 (486)
T 1t90_A            6 LKNYING-EWVESKTDQYEDVV--------NPATKEVLCQV-PISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQ   75 (486)
T ss_dssp             CCEEETT-EEECCSCSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred             cceeECC-EEecCCCCCeEEEE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Confidence            4689999 99988777778777        88899999666 99999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW  179 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~  179 (543)
                      ++|++++++|++++++|+|||..++. .|+..+++.+++++...+. ..++....  ...+...+++++|+|||++|+||
T Consensus        76 ~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~-~~g~~~~~--~~~~~~~~~~~~P~GVV~~I~Pw  151 (486)
T 1t90_A           76 QLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSL-MMGDSLAS--IATDVEAANYRYPIGVVGGIAPF  151 (486)
T ss_dssp             HHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHH-HCEEEEEE--EETTEEEEEEEEECSEEEEECCS
T ss_pred             HHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHH-hcCccccc--CCCCceeEEEecccCEEEEECCC
Confidence            99999999999999999999999997 5999999999998865443 33222111  11234568899999999999999


Q ss_pred             chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHH
Q 009109          180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRV  257 (543)
Q Consensus       180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~  257 (543)
                      |||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.+..|++|+ +|+|+||||+++
T Consensus       152 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~  231 (486)
T 1t90_A          152 NFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPV  231 (486)
T ss_dssp             SCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHH
T ss_pred             chhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHH
Confidence            9999999999999999999999999999999999999999999 99999999999878899999997 999999999999


Q ss_pred             HHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCE-EEEeCCcHHHHHHHHHHHHHh
Q 009109          258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDY-IITTKDFAPKLIDSLRNELKE  336 (543)
Q Consensus       258 g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~-v~V~~~i~~~f~~~l~~~~~~  336 (543)
                      |+.|++.+++++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++| ||||++ ||+|+++|++++++
T Consensus       232 g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~  309 (486)
T 1t90_A          232 GEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAF-GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVAD  309 (486)
T ss_dssp             HHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHH-hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999 999999999999 999999 99999999999999


Q ss_pred             hcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC--CCCceeeceEeeCCCCCCcccccccccceeee
Q 009109          337 FFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD--EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI  412 (543)
Q Consensus       337 l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v  412 (543)
                      +++|+|.+ ++++||++++.+++++.++++++.+ ++++++||...  ..|+|++|||+.+++++|++++||+||||++|
T Consensus       310 ~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v  389 (486)
T 1t90_A          310 IKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSV  389 (486)
T ss_dssp             CCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred             cccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEE
Confidence            99999976 6799999999999999999998864 67999999742  36899999999999999999999999999999


Q ss_pred             eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC--CcchHHHHH
Q 009109          413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG--SYHGKFSFD  490 (543)
Q Consensus       413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~  490 (543)
                      ++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ...+.+||||+|.||+|  +++|.+|++
T Consensus       390 ~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~g~~g~~  468 (486)
T 1t90_A          390 IRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVP-APMAFFPFSGWKSSFFGTLHANGKDSVD  468 (486)
T ss_dssp             EEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCC-CCCTTSCCCCEETTEESSSCSSHHHHHH
T ss_pred             EEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCC-CCCCCCCcCCCCcCCCCCCccchHHHHH
Confidence            999999999999999999999999999999999999999999999998643 34578999999999999  899999999


Q ss_pred             HhhhceEEEEec
Q 009109          491 AFSHKKAVLYRS  502 (543)
Q Consensus       491 ~~~~~k~v~~~~  502 (543)
                      +|++.|+|+.+.
T Consensus       469 ~~~~~k~v~~~~  480 (486)
T 1t90_A          469 FYTRKKVVTARY  480 (486)
T ss_dssp             HTEEEEEEEEEC
T ss_pred             HhhceEEEEEec
Confidence            999999998764

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=100.00  E-value=1.6e-97  Score=787.87  Aligned_cols=448  Identities=33%  Similarity=0.589  Sum_probs=409.7

Q ss_pred             cccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhh
Q 009109           46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF  125 (543)
Q Consensus        46 ~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~  125 (543)
                      ....||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..+++
T Consensus         8 ~~~~~~~~~~~i~~v-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~   86 (457)
T 3lns_A            8 HHHSSGHIDDDDKHM-NYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVD   86 (457)
T ss_dssp             ----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH
T ss_pred             ccccCCCCCCeeeec-CCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence            445699999999766 9999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCC
Q 009109          126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS  205 (543)
Q Consensus       126 ~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps  205 (543)
                      ..|+..+++.++++++.+++|.+++.........+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus        87 ~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps  166 (457)
T 3lns_A           87 LAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPS  166 (457)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECC
Confidence            66999999999999999999887543332222234578899999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhhhcCCCceEeecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEc
Q 009109          206 EIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD  285 (543)
Q Consensus       206 ~~~p~~~~~l~~~l~~alP~gvv~vv~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~  285 (543)
                      +.+|+++.++++++.+++|+|+||+|+|+.+.+.+|+++++|+|+||||+++|+.|++.+++++||+++|||||||+||+
T Consensus       167 ~~tp~t~~~l~~l~~~alP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~  246 (457)
T 3lns_A          167 ETTPETSAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVL  246 (457)
T ss_dssp             TTCHHHHHHHHHHHHHHCCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEEC
T ss_pred             CCChHHHHHHHHHHHHhCCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeEC
Confidence            99999999999999999999999999998889999998679999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009109          286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD  365 (543)
Q Consensus       286 ~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~  365 (543)
                      +|||++.|++.+++++| .|+||.|++++|||||+++||+|+++|++++++++   |.++ ++||++++.+++++.++++
T Consensus       247 ~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i~  321 (457)
T 3lns_A          247 PDADLDQTVNQLMFGKF-INSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLLE  321 (457)
T ss_dssp             TTCCHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH-HhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHHH
Confidence            99999999999999999 99999999999999999999999999999999988   5556 9999999999999999999


Q ss_pred             hhhcCCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHc-CCCCcEEEEecCCHHHH
Q 009109          366 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKS-KPKPLAAYFFSDDEQMK  444 (543)
Q Consensus       366 ~a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~a~i~t~d~~~~  444 (543)
                      ++.  +++++||..+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++||||+|.+.+
T Consensus       322 ~a~--~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a  399 (457)
T 3lns_A          322 ATQ--GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVA  399 (457)
T ss_dssp             HCC--SEEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHH
T ss_pred             hcC--CeEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHH
Confidence            863  699999987667999999999999999999999999999999999999999999999 99999999999999999


Q ss_pred             HHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEe
Q 009109          445 KEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       445 ~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~  501 (543)
                      +++++++++|+|+||+++.+...+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus       400 ~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~  456 (457)
T 3lns_A          400 KGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV  456 (457)
T ss_dssp             HHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred             HHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence            999999999999999987666678999999999999999999999999999999864

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=100.00  E-value=1.8e-97  Score=790.96  Aligned_cols=459  Identities=24%  Similarity=0.307  Sum_probs=424.1

Q ss_pred             cccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhh
Q 009109           46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF  125 (543)
Q Consensus        46 ~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~  125 (543)
                      +.++||+||++++.+ +.++.+|+++||++|++||+.|++++.++|.++|++++++|++|+++|++++++|+||+..+ .
T Consensus         8 ~~v~nP~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-~   85 (474)
T 4h7n_A            8 IEVRNPRTGKFDYVI-IPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSIT-V   85 (474)
T ss_dssp             EEEECTTTCSEEEEE-CCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHH-H
T ss_pred             EeeECCCCCCEEEEE-cCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH-H
Confidence            444499999999665 99999999999999999999999999999999999999999999999999999999998544 3


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCC
Q 009109          126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS  205 (543)
Q Consensus       126 ~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps  205 (543)
                       .|+..+++.+++++....++.........  .........++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus        86 -~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps  162 (474)
T 4h7n_A           86 -LEIDSFLASIDRWCGLAPELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS  162 (474)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHCCEEEECS--STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred             -HHHHHHHHHHHHHHhhhhhcccccccCCC--CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence             49999999999999988887765433221  123345678899999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEE
Q 009109          206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV  284 (543)
Q Consensus       206 ~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV  284 (543)
                      +.+|.++..+.+++.++ +|+|++|+++|+.+.+..|+.| +|+|+||||+.+|+.|++.+++++||+++|||||||+||
T Consensus       163 ~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV  241 (474)
T 4h7n_A          163 EIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIV  241 (474)
T ss_dssp             TTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEE
T ss_pred             ccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCcccc
Confidence            99999999999999998 9999999999999999999977 999999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHH
Q 009109          285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASL  363 (543)
Q Consensus       285 ~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~  363 (543)
                      ++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|+|.+ ++++||++++.+.+++.++
T Consensus       242 ~~dAdl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~  320 (474)
T 4h7n_A          242 LESANLELATSAILWGAV-VNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDH  320 (474)
T ss_dssp             CTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHH
T ss_pred             CchhhHHHHHHHHHhhhc-cCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHH
Confidence            999999999999999999 99999999999999999999999999999999999999987 6799999999999999999


Q ss_pred             HHhhhc-CCEEEECcccC--CCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCC
Q 009109          364 LDEDKV-SDKIVYGGQRD--EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDD  440 (543)
Q Consensus       364 i~~a~~-~~~v~~gg~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d  440 (543)
                      ++++.+ ++++++||..+  ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus       321 i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d  400 (474)
T 4h7n_A          321 ILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGS  400 (474)
T ss_dssp             HHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSS
T ss_pred             HHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCC
Confidence            999876 56888998764  468999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC-CcchHHHHHHhhhceEEEEecCCCCCCCcC
Q 009109          441 EQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG-SYHGKFSFDAFSHKKAVLYRSFNGDSTTRY  511 (543)
Q Consensus       441 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~  511 (543)
                      .++++++++++++|+|+||+.+.+...+.+||||+|.||+| +++|.+|+++|++.|+|+++......+++|
T Consensus       401 ~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~  472 (474)
T 4h7n_A          401 EDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF  472 (474)
T ss_dssp             HHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred             HHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence            99999999999999999999888777889999999999998 889999999999999999987544444444

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=100.00  E-value=5.7e-97  Score=785.91  Aligned_cols=449  Identities=22%  Similarity=0.361  Sum_probs=423.1

Q ss_pred             ccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchh
Q 009109           45 SFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET  124 (543)
Q Consensus        45 ~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea  124 (543)
                      ++.+.||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+|||..++
T Consensus         8 ~~~~~~P~t~~~i~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   86 (462)
T 3etf_A            8 QALSVNPATGQTLAAM-PWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQA   86 (462)
T ss_dssp             CSEEECTTTCCEEEEC-CCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred             ccceECCCCCCEEEEe-cCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence            3555599999999766 999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeC
Q 009109          125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKP  204 (543)
Q Consensus       125 ~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKp  204 (543)
                      +. |+..+++.++++++..+++.....    ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus        87 ~~-ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp  161 (462)
T 3etf_A           87 RA-EVTKSAALCDWYAEHGPAMLNPEP----TLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH  161 (462)
T ss_dssp             HH-HHHHHHHHHHHHHHHHHHHTSCEE----CSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred             HH-HHHHHHHHHHHHHHhHHHhcCCcc----cCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence            84 999999999999999888765431    1122446789999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcE
Q 009109          205 SEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA  282 (543)
Q Consensus       205 s~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~  282 (543)
                      |+.+|.++.++++++.++ +|+|+||+|+|+.+.+..|++|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+
T Consensus       162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~  241 (462)
T 3etf_A          162 APNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPF  241 (462)
T ss_dssp             CTTCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEE
T ss_pred             CCCCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCcc
Confidence            999999999999999998 99999999999888899999996 9999999999999999999999999999999999999


Q ss_pred             EEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHH
Q 009109          283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLA  361 (543)
Q Consensus       283 iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~  361 (543)
                      ||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.
T Consensus       242 iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~  320 (462)
T 3etf_A          242 IVLNDADLELAVKAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELH  320 (462)
T ss_dssp             EECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHH
T ss_pred             EECCCCCHHHHHHHHHHHHH-hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHH
Confidence            99999999999999999999 99999999999999999999999999999999999999976 67999999999999999


Q ss_pred             HHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecC
Q 009109          362 SLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSD  439 (543)
Q Consensus       362 ~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~  439 (543)
                      ++++++.+ ++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus       321 ~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~  400 (462)
T 3etf_A          321 QQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTA  400 (462)
T ss_dssp             HHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECS
T ss_pred             HHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECC
Confidence            99999875 6799999975 457999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEec
Q 009109          440 DEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       440 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~  502 (543)
                      |.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++||+.|+|++++
T Consensus       401 d~~~a~~~~~~l~aG~v~vN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r  461 (462)
T 3etf_A          401 DDTLAAEMAARLECGGVFINGYSA--SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR  461 (462)
T ss_dssp             CHHHHHHHHHHCCSSEEEESSCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred             CHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence            999999999999999999999764  5688999999999999999999999999999998764

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=100.00  E-value=3e-97  Score=798.65  Aligned_cols=477  Identities=18%  Similarity=0.214  Sum_probs=433.3

Q ss_pred             cccceeeecceecccCCcccccccccCccccccCCc-hhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 009109           18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ   96 (543)
Q Consensus        18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~   96 (543)
                      ...++|||| +|+.+.+  ++.++        ||.| |++++.+ +.++.+|+++||++|++||+.|+.++..+|.++|+
T Consensus        62 ~~~~~~I~G-~~~~~~~--~~~~~--------~P~~~~~~i~~~-~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~  129 (563)
T 4e3x_A           62 EAIPCVVGD-EEVWTSD--IQYQL--------SPFNHAHKVAKF-CYADKALLNRAIDAALAARKEWDLKPMADRAQVFL  129 (563)
T ss_dssp             EECCEEETT-EEECCSC--EEEEE--------ETTEEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred             ccCCeEECC-EEeecCC--ceeee--------CCCCCCcEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence            356799999 9998643  34444        7887 7888666 99999999999999999999999999999999999


Q ss_pred             HHHHHHHHh-HHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEE
Q 009109           97 SIANMIEEK-EEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLV  175 (543)
Q Consensus        97 ~~a~~l~~~-~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~  175 (543)
                      +++++|+++ +++|++++++|+|||..+++..|+..+++.++++++.++++...+....   ..+...++++.|+|||++
T Consensus       130 ~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~r~p~GVV~~  206 (563)
T 4e3x_A          130 KAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISV---PPSTNHTVYRGLEGFVAA  206 (563)
T ss_dssp             HHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCC---TTEEEEEECCBCSSEEEE
T ss_pred             HHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCC---CCCcceEEEecCceEEEE
Confidence            999999999 9999999999999999999863499999999999999998866442211   112335667778899999


Q ss_pred             EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEe
Q 009109          176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYT  252 (543)
Q Consensus       176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ft  252 (543)
                      |+|||||+....+++++|| +||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||
T Consensus       207 I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FT  285 (563)
T 4e3x_A          207 ISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFT  285 (563)
T ss_dssp             ECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEE
T ss_pred             ECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEE
Confidence            9999999999999999999 599999999999999999999999999 99999999999 566899999996 9999999


Q ss_pred             CChHHHHHHHHHHhcccCc------EEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHH
Q 009109          253 GSPRVGRIVMAAAAKHLTP------VILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKL  326 (543)
Q Consensus       253 GS~~~g~~i~~~a~~~~~~------~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f  326 (543)
                      ||+++|+.|++.++++++|      +++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++||+|
T Consensus       286 GSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f-~~~GQ~C~A~~rv~V~~si~d~f  364 (563)
T 4e3x_A          286 GSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQI  364 (563)
T ss_dssp             SCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHH
T ss_pred             CCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEecchHHHH
Confidence            9999999999999999885      9999999999999999999999999999999 99999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCC-CC-CCcccccCCHHHHHHHHHHHHhhhc--CCEEEECcccC-CCCceeeceEeeCCCCCCccc
Q 009109          327 IDSLRNELKEFFGKNP-ME-SKDLSRIVNPFHFARLASLLDEDKV--SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIM  401 (543)
Q Consensus       327 ~~~l~~~~~~l~~g~~-~~-~~~~gpli~~~~~~~~~~~i~~a~~--~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~  401 (543)
                      +++|+++++++++||| .+ ++++||++++.+++++.++|+++++  ++++++||..+ ..|+|++|||+.+++++|+++
T Consensus       365 ~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~  444 (563)
T 4e3x_A          365 KGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIM  444 (563)
T ss_dssp             HHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGG
T ss_pred             HHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhh
Confidence            9999999999999999 66 7799999999999999999999873  56999999764 479999999999999999999


Q ss_pred             ccccccceeeeeccCC--HHHHHHHH-HcCCCCcEEEEecCCHHHHHHHHhhcc--ceeEEECCCcccCCCCCCCcccCC
Q 009109          402 KEEIFGPLLPIVTVEK--IEDSFDVI-KSKPKPLAAYFFSDDEQMKKEFVQNIS--AGGIVFNDTIVHTTVSSLPFGGVG  476 (543)
Q Consensus       402 ~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~i~t~d~~~~~~~~~~l~--~G~v~iN~~~~~~~~~~~pfGG~~  476 (543)
                      +||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+.+++++++++  +|+|+||+.+++...+.+||||+|
T Consensus       445 ~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k  524 (563)
T 4e3x_A          445 KEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGAR  524 (563)
T ss_dssp             TSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEE
T ss_pred             cCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCcc
Confidence            9999999999999997  79999999 789999999999999999999999975  999999998776667889999999


Q ss_pred             CCCCC-CcchHHHHHHhhhceEEEEecCCCCCCCcCC
Q 009109          477 ESGMG-SYHGKFSFDAFSHKKAVLYRSFNGDSTTRYP  512 (543)
Q Consensus       477 ~SG~G-~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~~  512 (543)
                      .||+| +.+|.+++++|++.|+|..+ +..+.+++||
T Consensus       525 ~SG~g~~~~G~~~l~~~~~~k~v~~~-~~~~~~~~yp  560 (563)
T 4e3x_A          525 ASGTNDKPGGPHYILRWTSPQVIKET-HKPLGDWRYS  560 (563)
T ss_dssp             TTBCCCCTTSTTGGGGGBCCEEEEEE-CSCCCCSSCT
T ss_pred             ccCCCCccCCHHHHHHhCceEEEEEe-CcCCCcccCC
Confidence            99998 89999999999999999875 4445566664

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=100.00  E-value=5.7e-94  Score=766.44  Aligned_cols=458  Identities=21%  Similarity=0.320  Sum_probs=423.5

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a   99 (543)
                      .++|||| +|+.+. +.+++++        ||.||++++.+ +.++.+|+++++++|++||+.|+.++..+|.++|++++
T Consensus         6 ~~~~I~G-~~~~~~-~~~~~~~--------~P~tg~~~~~~-~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a   74 (490)
T 3ju8_A            6 STHYIAG-QWLAGQ-GETLESL--------DPVGQGVVWSG-RGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFA   74 (490)
T ss_dssp             CCEEETT-EEECCC-SCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred             cCceECC-EEecCC-CCeEEEE--------CCCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence            4899999 999874 4556666        88899999666 99999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCC
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW  179 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~  179 (543)
                      ++|++++++|++++++|+|||..+++ .|+..+++.++++++..+.+.+.....    ..+...+++++|+|||++|+||
T Consensus        75 ~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~Pw  149 (490)
T 3ju8_A           75 ATLKSRADELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPY  149 (490)
T ss_dssp             HHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCS
T ss_pred             HHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCC
Confidence            99999999999999999999999998 599999999999999888765443211    1234567789999999999999


Q ss_pred             chhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHH
Q 009109          180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRV  257 (543)
Q Consensus       180 N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~  257 (543)
                      |||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.+++|++|+ +|+|+||||+++
T Consensus       150 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~  229 (490)
T 3ju8_A          150 NFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRT  229 (490)
T ss_dssp             SSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHH
T ss_pred             cchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHH
Confidence            9999999999999999999999999999999999999999999 99999999999888999999996 999999999999


Q ss_pred             HHHHHHHHhcccCcE-EEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCc-HHHHHHHHHHHHH
Q 009109          258 GRIVMAAAAKHLTPV-ILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDF-APKLIDSLRNELK  335 (543)
Q Consensus       258 g~~i~~~a~~~~~~~-~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~  335 (543)
                      |+.|++.++++++|+ ++|+|||||+||++|||++.|++.+++++| +|+||.|++++|+|||+++ ||+|+++|+++++
T Consensus       230 g~~i~~~aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~  308 (490)
T 3ju8_A          230 GNLLHSQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSA  308 (490)
T ss_dssp             HHHHHHHTTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCCEEEEECCccHHHHHHHHHHHHH
Confidence            999999999999998 899999999999999999999999999999 9999999999999999996 9999999999999


Q ss_pred             hhcCCC-CCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccceee
Q 009109          336 EFFGKN-PME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP  411 (543)
Q Consensus       336 ~l~~g~-~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~  411 (543)
                      ++++|+ |.+ .+++||++++.+++++.++++++.+ ++++++||.. +..|+|++|||+. ++++|++++||+||||++
T Consensus       309 ~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~  387 (490)
T 3ju8_A          309 TLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQ  387 (490)
T ss_dssp             HCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEE
T ss_pred             hccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEE
Confidence            999998 776 6799999999999999999999865 6799999865 3479999999999 999999999999999999


Q ss_pred             eeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHH
Q 009109          412 IVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDA  491 (543)
Q Consensus       412 v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~  491 (543)
                      |++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++. ...+.+||||+|.||++      ++++
T Consensus       388 v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~-~~~~~~PfGG~~~SG~~------~~~~  460 (490)
T 3ju8_A          388 VIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLT-GAASSAPFGGIGASGNH------RPSA  460 (490)
T ss_dssp             EEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSS-CCCTTSEECCCGGGBSS------CCEE
T ss_pred             EEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcC-CCCCCCCcCCccccchh------HHHh
Confidence            9999999999999999999999999999999999999999999999999875 34578999999999975      4788


Q ss_pred             hhhceEEEEec
Q 009109          492 FSHKKAVLYRS  502 (543)
Q Consensus       492 ~~~~k~v~~~~  502 (543)
                      |++.|+|++..
T Consensus       461 ~~~~k~v~~~~  471 (490)
T 3ju8_A          461 YYAADYCAYPV  471 (490)
T ss_dssp             TTHHHHHEEEE
T ss_pred             hheeEEEEEec
Confidence            99999887764

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=100.00  E-value=2.1e-94  Score=816.31  Aligned_cols=468  Identities=18%  Similarity=0.272  Sum_probs=435.8

Q ss_pred             cccceeeecceecccCCcccccccccCccccccCCc-hhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 009109           18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ   96 (543)
Q Consensus        18 ~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~   96 (543)
                      ...++|||| +|+.+  +.+++++        ||.| |++++.+ +.++.+|+++|+++|++||+.|+.+|+.+|.++|+
T Consensus       530 ~~~~~~I~G-~~~~~--~~~~~v~--------nPa~~~~~i~~v-~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~  597 (1026)
T 4f9i_A          530 KTYPLFING-KEVRT--NDLIPTV--------NPNKPSEVLGQI-CQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLL  597 (1026)
T ss_dssp             EEECEEETT-EEECC--SCEEEEE--------ETTEEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred             cccCceECC-EEecC--CCcEEEe--------CCCCCCceEEEE-eCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHH
Confidence            456799999 99864  5566666        7777 8888666 99999999999999999999999999999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEE
Q 009109           97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI  176 (543)
Q Consensus        97 ~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i  176 (543)
                      +++++|++++++|++++++|+|||..++.. |+..+++.+++++..++++........   ..+...++.++|+|||++|
T Consensus       598 ~~Adll~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I  673 (1026)
T 4f9i_A          598 KAAQAARKRLFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVI  673 (1026)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEe
Confidence            999999999999999999999999999985 999999999999999988765432211   2345678899999999999


Q ss_pred             cCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeC
Q 009109          177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG  253 (543)
Q Consensus       177 ~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftG  253 (543)
                      +|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+|+| +.+.++.|++|+ ||+|+|||
T Consensus       674 ~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTG  753 (1026)
T 4f9i_A          674 APWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTG  753 (1026)
T ss_dssp             CCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEES
T ss_pred             CCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCC
Confidence            9999999999999999999999999999999999999999999999 99999999999 567899999997 99999999


Q ss_pred             ChHHHHHHHHHHh------cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHH
Q 009109          254 SPRVGRIVMAAAA------KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLI  327 (543)
Q Consensus       254 S~~~g~~i~~~a~------~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~  327 (543)
                      |+++|+.|++.++      ++++|+++|+|||||+||++|||++.|++.+++|+| .|+||.|++++|||||++++|+|+
T Consensus       754 St~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf-~~aGQ~C~A~~rl~V~~~i~d~f~  832 (1026)
T 4f9i_A          754 SMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAF-GFQGQKCSACSRVIVLDAVYDKFI  832 (1026)
T ss_dssp             CHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHH
T ss_pred             CHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCCCCCCceEEecHHHHHHHH
Confidence            9999999999988      578999999999999999999999999999999999 999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCC-CceeeceEeeCCCCCCccccccc
Q 009109          328 DSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEK-QLKIAPTILLDVPDDSTIMKEEI  405 (543)
Q Consensus       328 ~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~-g~~~~Ptvl~~~~~~~~~~~~E~  405 (543)
                      ++|+++++++++|+|.+ ++++||+|++.+++++.++|+++++.+++++||..+.. |+|++|||+.+++++|++++||+
T Consensus       833 ~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEi  912 (1026)
T 4f9i_A          833 ERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEI  912 (1026)
T ss_dssp             HHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCC
T ss_pred             HHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCCeEEecCCcCCCCCceecceeeecCCCCccccCcee
Confidence            99999999999999987 67999999999999999999998875699999987555 99999999999999999999999


Q ss_pred             ccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCC-cc
Q 009109          406 FGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGS-YH  484 (543)
Q Consensus       406 fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~  484 (543)
                      ||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+++...+.+||||+|.||+|+ .+
T Consensus       913 FGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~g  992 (1026)
T 4f9i_A          913 FGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAG  992 (1026)
T ss_dssp             CSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBT
T ss_pred             cCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcC
Confidence            99999999999999999999999999999999999999999999999999999998877677899999999999995 57


Q ss_pred             hHHHHHHhhhceEEEEec
Q 009109          485 GKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       485 g~~~~~~~~~~k~v~~~~  502 (543)
                      |++++++|++.|+|.+..
T Consensus       993 G~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A          993 GPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp             STTTGGGGEEEEEEEEEC
T ss_pred             CHHHHHHhceEEEEEEec
Confidence            899999999999998864

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=100.00  E-value=9.5e-94  Score=772.43  Aligned_cols=466  Identities=16%  Similarity=0.230  Sum_probs=415.0

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHH-hhhhcCCCHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN-YNSRKTKSYEWRMSQIQSI   98 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A-~~~w~~~~~~~R~~iL~~~   98 (543)
                      .++|||| +|+.+.+ .+++++        ||.||++++.+ +.++ +|+++|+++|++| |+.|+.++..+|.++|+++
T Consensus         8 ~~~~i~G-~~~~~~~-~~~~v~--------nP~tg~~i~~~-~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~   75 (534)
T 2y53_A            8 LKNHVAG-QWIAGTG-AGITLT--------DPVTGVALVRV-SSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADI   75 (534)
T ss_dssp             CCEEETT-EEECCSS-SCEEEE--------CTTTCCEEEEE-CCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred             hhhEECC-EEecCCC-CeEEEE--------CCCCCCEEEEE-eCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHH
Confidence            4689999 9998754 356666        88899999776 7777 8999999999999 5999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCc---ccc-cCcCCCC-cceEEeecc-eE
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEK---AKT-SLTTYPS-SAEIISEPL-GV  172 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~---~~~-~~~~~~~-~~~~~~~P~-GV  172 (543)
                      +++|++++++|++++++|+|||..+++. |+..+++.+++++..++++.....   ... .....+. ..++.++|+ ||
T Consensus        76 a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GV  154 (534)
T 2y53_A           76 VKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGV  154 (534)
T ss_dssp             HHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSC
T ss_pred             HHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCE
Confidence            9999999999999999999999999985 999999999999988766432111   000 1111111 357889997 99


Q ss_pred             EEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh--cCCCceEeecCChHHHHHHHhC--CCCE
Q 009109          173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY--VDNSAVRVVEGAVAETSALLEQ--KWDK  248 (543)
Q Consensus       173 v~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a--lP~gvv~vv~g~~~~~~~L~~~--~v~~  248 (543)
                      |++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.++  +|+|+||+|+|+..   .+.++  .+|+
T Consensus       155 v~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~  231 (534)
T 2y53_A          155 ALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSA---GLLDQIRSFDV  231 (534)
T ss_dssp             EEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCT---TSGGGCCTTCE
T ss_pred             EEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChH---HHHhcccccCE
Confidence            99999999999999999999999999999999999999999999999997  59999999998432   24443  4999


Q ss_pred             EEEeCChHHHHHHHHHHh--cccCcEEEecCCCCcEEEcCCC-----CHHHHHHHHHHhhcccCCCCccccCCEEEEeCC
Q 009109          249 ILYTGSPRVGRIVMAAAA--KHLTPVILELGGKSPAVVDSTI-----NLQVTTRRIIAGKWMANNGQACIGVDYIITTKD  321 (543)
Q Consensus       249 v~ftGS~~~g~~i~~~a~--~~~~~~~lelgG~~p~iV~~da-----Dl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~  321 (543)
                      |+||||+++|+.|++.++  +++||+++|||||||+||++||     |++.|++.+++++| .|+||.|++++|||||++
T Consensus       232 V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~  310 (534)
T 2y53_A          232 VSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMT-VKSGQKCTAIRRAFVPEA  310 (534)
T ss_dssp             EEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGG
T ss_pred             EEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHH-hCCCCcccCCCEEEEecc
Confidence            999999999999998875  8999999999999999999999     99999999999999 999999999999999999


Q ss_pred             cHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccC-------CCCceeeceEeeC
Q 009109          322 FAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD-------EKQLKIAPTILLD  393 (543)
Q Consensus       322 i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~-------~~g~~~~Ptvl~~  393 (543)
                      +||+|+++|+++++++++|||.+ ++++|||+++.+++++.++|+++.+++++++||...       ..|+|++|||+.+
T Consensus       311 i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~  390 (534)
T 2y53_A          311 ALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVV  390 (534)
T ss_dssp             GHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEEC
T ss_pred             HHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEe
Confidence            99999999999999999999987 779999999999999999999986678999998642       3589999999999


Q ss_pred             CCCC--CcccccccccceeeeeccC---CH-----HHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc--cceeEEECCC
Q 009109          394 VPDD--STIMKEEIFGPLLPIVTVE---KI-----EDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI--SAGGIVFNDT  461 (543)
Q Consensus       394 ~~~~--~~~~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l--~~G~v~iN~~  461 (543)
                      ++++  |++++||+||||++|++|+   |+     ||||+++|+++|||++||||+|.++++++++++  ++|+|+||++
T Consensus       391 v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~  470 (534)
T 2y53_A          391 NDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISP  470 (534)
T ss_dssp             SCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECG
T ss_pred             cCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCC
Confidence            9977  6899999999999999999   99     999999999999999999999999999999999  8999999987


Q ss_pred             ccc-------CCCCCCCcccCCCCCCCCc-chHHHHHHhhhceEEEEec
Q 009109          462 IVH-------TTVSSLPFGGVGESGMGSY-HGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       462 ~~~-------~~~~~~pfGG~~~SG~G~~-~g~~~~~~~~~~k~v~~~~  502 (543)
                      ..+       ...+.+||||+|.||+|++ +|.+++++|++.|++...+
T Consensus       471 ~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~p  519 (534)
T 2y53_A          471 SVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAAS  519 (534)
T ss_dssp             GGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEEH
T ss_pred             cccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecCH
Confidence            531       2357899999999999999 6999999999999988654

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-91  Score=754.45  Aligned_cols=467  Identities=18%  Similarity=0.206  Sum_probs=413.9

Q ss_pred             chhhhhhcccccccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCC
Q 009109            7 RAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTK   86 (543)
Q Consensus         7 ~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~   86 (543)
                      .|||..+. +-...++|||| +|+.+.+     +        .||.||++++..++.++.+|+++|+++|++||+.|+.+
T Consensus        18 ~~~~~~~~-~~~~~~~~I~G-~~~~~~~-----v--------~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~   82 (528)
T 3v4c_A           18 LYFQSMMI-FTPKGKHLVAG-EWLDGAG-----T--------FASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYS   82 (528)
T ss_dssp             -----CCS-CCCCCCEEETT-EEECCSS-----E--------EECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHhhh-cccccCceECC-EEecCCC-----c--------cCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            57777554 44556899999 9998743     4        48999999973449999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhh--hcCCCcccccC---cCCCC
Q 009109           87 SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY--WTKPEKAKTSL---TTYPS  161 (543)
Q Consensus        87 ~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~--~~~~~~~~~~~---~~~~~  161 (543)
                      +..+|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.++++++.+++  |..........   ...+.
T Consensus        83 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (528)
T 3v4c_A           83 SRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQ  161 (528)
T ss_dssp             CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBC
T ss_pred             CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCC
Confidence            999999999999999999999999999999999999997 4999999999999999887  44332110000   01223


Q ss_pred             cceEEeecceEEEEEcCCchhhhhhh--hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHh----hh-cCCCceEeecC-
Q 009109          162 SAEIISEPLGVVLVISTWNYPFLLSL--DPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----DY-VDNSAVRVVEG-  233 (543)
Q Consensus       162 ~~~~~~~P~GVv~~i~p~N~P~~~~~--~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~----~a-lP~gvv~vv~g-  233 (543)
                      ..+++++|+|||++|+|||||+.+.+  +++++||++||+||+|||+.+|+++.++++++.    ++ +|+|+||+|+| 
T Consensus       162 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~  241 (528)
T 3v4c_A          162 EIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGG  241 (528)
T ss_dssp             CEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCC
T ss_pred             cceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCC
Confidence            56889999999999999999999865  899999999999999999999999999999765    46 99999999999 


Q ss_pred             ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhccc--CcEEEecCCCCcEEEcCCC---CHHHHHHHHHHhhcccCCC
Q 009109          234 AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHL--TPVILELGGKSPAVVDSTI---NLQVTTRRIIAGKWMANNG  307 (543)
Q Consensus       234 ~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~--~~~~lelgG~~p~iV~~da---Dl~~aa~~iv~~~~~~~~G  307 (543)
                      +.+.+++|++|+ ||+|+||||+++|+.|++.+++++  ||+++|+|||||+||++||   |++.|++.+++++| .|+|
T Consensus       242 ~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~G  320 (528)
T 3v4c_A          242 SRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLT-MGAG  320 (528)
T ss_dssp             CHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGGG
T ss_pred             CHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHH-hcCC
Confidence            678999999996 999999999999999999999999  9999999999999999999   88999999999999 9999


Q ss_pred             CccccCCEEEEeCC-cHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCCcee
Q 009109          308 QACIGVDYIITTKD-FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKI  386 (543)
Q Consensus       308 q~C~a~~~v~V~~~-i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~  386 (543)
                      |.|++++|||||++ +||+|+++|++++++++.+     +.+||++++.+.+++.++++  .+++++++||..  .|+|+
T Consensus       321 Q~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~-----~~~gp~~~~~~~~~v~~~~~--~~Ga~v~~gG~~--~g~~~  391 (528)
T 3v4c_A          321 QFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ-----TMLTDGIAKAYRDGQARFAT--RNAVKPLLATES--SGRDA  391 (528)
T ss_dssp             CCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE-----ECSCHHHHHHHHHHHHHHHT--CTTCEEEECCCC--CTTEE
T ss_pred             CccccCcEEEEecccHHHHHHHHHHHHHHhcccC-----CCCCHHHHHHHHHHHHHHHH--hCCCEEEeCCCc--CCcee
Confidence            99999999999998 9999999999999988643     56999999888888888874  256799999975  79999


Q ss_pred             eceEeeCCCCC---CcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecC--CHHHHHHHHhhcc--ceeEEEC
Q 009109          387 APTILLDVPDD---STIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSD--DEQMKKEFVQNIS--AGGIVFN  459 (543)
Q Consensus       387 ~Ptvl~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~--d~~~~~~~~~~l~--~G~v~iN  459 (543)
                      +|||+.+++++   |++++||+||||++|++|+|+||||+++|+++|||++||||+  |.+++++++++++  +|+|+||
T Consensus       392 ~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN  471 (528)
T 3v4c_A          392 SPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVN  471 (528)
T ss_dssp             CCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEES
T ss_pred             ccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEc
Confidence            99999988887   899999999999999999999999999999999999999999  8999999999998  9999999


Q ss_pred             CCccc-CCCCCCCccc-CCCCCCCCcc--hHHHHHHhhhceEEE
Q 009109          460 DTIVH-TTVSSLPFGG-VGESGMGSYH--GKFSFDAFSHKKAVL  499 (543)
Q Consensus       460 ~~~~~-~~~~~~pfGG-~~~SG~G~~~--g~~~~~~~~~~k~v~  499 (543)
                      +++++ ...+.+|||| +|.||+|+++  |.+|+++|++.|++.
T Consensus       472 ~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~q  515 (528)
T 3v4c_A          472 GFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAYQ  515 (528)
T ss_dssp             SCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEEE
T ss_pred             CCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHhh
Confidence            97653 3468899999 9999999986  999999999999753

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=100.00  E-value=2.2e-88  Score=726.85  Aligned_cols=445  Identities=19%  Similarity=0.225  Sum_probs=397.1

Q ss_pred             cCCcccccccccCccccccCCchhhh-hhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009109           32 NQTHISFPYLSLTSFSCRCSATMAAE-EKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEII  110 (543)
Q Consensus        32 ~~~~~~~~~~~p~~~~~~~p~tg~~~-~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela  110 (543)
                      +.++.+++++        ||.||+++ +.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++++++|+
T Consensus         3 ~~~~~~~~~~--------nP~tg~~i~~~~-~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela   73 (510)
T 1ez0_A            3 PQTDNVFYAT--------NAFTGEALPLAF-PVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDII   73 (510)
T ss_dssp             --CCCEEEEE--------CTTTSSEEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred             CCCCCeEEeE--------CCCCCCEEEEEE-CCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            3455556665        88899999 566 9999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhh--hcCCCcccc-cCc-CCC-CcceEEeecceEEEEEcCCchhhhh
Q 009109          111 EAIHKDLSKPPFETFISEISMTKSSCKLALKELKY--WTKPEKAKT-SLT-TYP-SSAEIISEPLGVVLVISTWNYPFLL  185 (543)
Q Consensus       111 ~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~--~~~~~~~~~-~~~-~~~-~~~~~~~~P~GVv~~i~p~N~P~~~  185 (543)
                      +++++|+|||..++. .|+..+++.++++++.+++  |.+...... +.. ..+ ...+++++|+|||++|+|||||+.+
T Consensus        74 ~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~  152 (510)
T 1ez0_A           74 ARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAF  152 (510)
T ss_dssp             HHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTT
T ss_pred             HHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhh
Confidence            999999999999886 4999999999999999886  554221100 000 011 1357899999999999999999998


Q ss_pred             hh--hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHh----hh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChH
Q 009109          186 SL--DPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----DY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPR  256 (543)
Q Consensus       186 ~~--~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~----~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~  256 (543)
                      .+  +++++||++||+||+|||+.+|+++.++++++.    ++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||++
T Consensus       153 ~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~  232 (510)
T 1ez0_A          153 SAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVG  232 (510)
T ss_dssp             STTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHH
T ss_pred             hhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHH
Confidence            54  999999999999999999999999999999984    45 89999999999 678899999997 99999999999


Q ss_pred             HHHHHHHHHhccc--CcEEEecCCCCcEEEcCCCCHH--HHHHHHHHhhcccCCCCccccCCEEEEeCC-cHHHHHHHHH
Q 009109          257 VGRIVMAAAAKHL--TPVILELGGKSPAVVDSTINLQ--VTTRRIIAGKWMANNGQACIGVDYIITTKD-FAPKLIDSLR  331 (543)
Q Consensus       257 ~g~~i~~~a~~~~--~~~~lelgG~~p~iV~~daDl~--~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~  331 (543)
                      +|+.|++.+++++  ||+++|||||||+||++|||++  .|++.+++++| +|+||.|++++|||||++ +||+|+++|+
T Consensus       233 ~G~~i~~~aa~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~  311 (510)
T 1ez0_A          233 GGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQ  311 (510)
T ss_dssp             HHHHHHHHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHH
T ss_pred             HHHHHHHHhhccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCCCcCCCCEEEEeCCccHHHHHHHHH
Confidence            9999999999986  9999999999999999999999  99999999999 999999999999999999 9999999999


Q ss_pred             HHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhc--CCEEEECcccCCCCceeeceEeeCCCCC---Ccccccccc
Q 009109          332 NELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV--SDKIVYGGQRDEKQLKIAPTILLDVPDD---STIMKEEIF  406 (543)
Q Consensus       332 ~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~--~~~v~~gg~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~f  406 (543)
                      +++++++         .||++++.+.+++.++++++.+  ++++++||.   .|+|++|||+.+++++   |++++||+|
T Consensus       312 ~~~~~~~---------~gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiF  379 (510)
T 1ez0_A          312 SLIRQQS---------PSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIF  379 (510)
T ss_dssp             HHHHHCC---------CBCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCC
T ss_pred             HHHHhcC---------CCCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCcc
Confidence            9999987         3688899999999999988863  569999997   3999999999988777   999999999


Q ss_pred             cceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCH--HHHHHHHhhc--cceeEEECCCcccC-CCCCCCccc-CCCCCC
Q 009109          407 GPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDE--QMKKEFVQNI--SAGGIVFNDTIVHT-TVSSLPFGG-VGESGM  480 (543)
Q Consensus       407 gPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~--~~~~~~~~~l--~~G~v~iN~~~~~~-~~~~~pfGG-~~~SG~  480 (543)
                      |||++|++|+|+||||+++|+++|||++||||+|.  ++++++++++  ++|+|+||++..+. ..+.+|||| .|.||.
T Consensus       380 GPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~  459 (510)
T 1ez0_A          380 GPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTH  459 (510)
T ss_dssp             SSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSC
T ss_pred             CCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCC
Confidence            99999999999999999999999999999999987  7899999999  79999999876432 356899999 788999


Q ss_pred             CCc--chHHHHHHhhhceEEE
Q 009109          481 GSY--HGKFSFDAFSHKKAVL  499 (543)
Q Consensus       481 G~~--~g~~~~~~~~~~k~v~  499 (543)
                      |+.  +|.+|+++|++.|++.
T Consensus       460 g~~~~~G~~gl~~~~~~k~~~  480 (510)
T 1ez0_A          460 SASTSVGAEAIHRWLRPVAYQ  480 (510)
T ss_dssp             SSCCSSSGGGGGGGEEEEEEE
T ss_pred             CCCCCccHHHHHHhheEEEEc
Confidence            854  8999999999988764

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=100.00  E-value=1.2e-87  Score=759.58  Aligned_cols=434  Identities=22%  Similarity=0.353  Sum_probs=404.7

Q ss_pred             cCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHH
Q 009109           62 QRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALK  141 (543)
Q Consensus        62 ~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~  141 (543)
                      +.++.+|+++|+++|++||+.|+.+|+.+|.++|++++++|+++.++|++++++|+|||+.++. .|+..+++.+++++.
T Consensus       545 ~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a~  623 (1001)
T 3haz_A          545 ADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYAA  623 (1001)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHHH
Confidence            7799999999999999999999999999999999999999999999999999999999999997 499999999999999


Q ss_pred             HHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhh
Q 009109          142 ELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED  221 (543)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~  221 (543)
                      ..+++.+.... . ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.+
T Consensus       624 ~a~~~~g~~~~-~-~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~e  701 (1001)
T 3haz_A          624 QGRKLFGSETA-M-PGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHE  701 (1001)
T ss_dssp             HHHHHHSSCEE-C-CCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             HHHhhcCcccc-c-cCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHH
Confidence            98887543211 1 112345678899999999999999999999999999999999999999999999999999999999


Q ss_pred             h-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcc---cCcEEEecCCCCcEEEcCCCCHHHHHHH
Q 009109          222 Y-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKH---LTPVILELGGKSPAVVDSTINLQVTTRR  296 (543)
Q Consensus       222 a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~---~~~~~lelgG~~p~iV~~daDl~~aa~~  296 (543)
                      + +|+|+||+|+|+.+.+..|++|+ ||+|+||||+++|+.|++.++++   ++|+++|+|||||+||++|||++.|++.
T Consensus       702 AGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~  781 (1001)
T 3haz_A          702 AGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADD  781 (1001)
T ss_dssp             HTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHH
T ss_pred             hCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHH
Confidence            9 99999999999554499999997 99999999999999999998864   8999999999999999999999999999


Q ss_pred             HHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhcCCEEEE
Q 009109          297 IIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVY  375 (543)
Q Consensus       297 iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~  375 (543)
                      +++++| .|+||.|+++++||||+++||+|+++|+++++++++|+|.+ ++++||++++.+.+++.++|+++.+++++ +
T Consensus       782 iv~s~f-~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v-~  859 (1001)
T 3haz_A          782 VVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL-H  859 (1001)
T ss_dssp             HHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE-E
T ss_pred             HHHHHH-hCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE-e
Confidence            999999 99999999999999999999999999999999999999976 78999999999999999999998776688 9


Q ss_pred             CcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCC--HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccc
Q 009109          376 GGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEK--IEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISA  453 (543)
Q Consensus       376 gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~  453 (543)
                      ||..+..|+|++|||+.+  +++.+++||+||||++|++|++  ++|||+++|+++|||+++|||+|.+.++++++++++
T Consensus       860 gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~a  937 (1001)
T 3haz_A          860 FAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQV  937 (1001)
T ss_dssp             EECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCC
T ss_pred             ccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCe
Confidence            988777799999999975  6788999999999999999996  799999999999999999999999999999999999


Q ss_pred             eeEEECCCcccCCCCCCCcccCCCCCCCC-cchHHHHHHhhhceEEEEec
Q 009109          454 GGIVFNDTIVHTTVSSLPFGGVGESGMGS-YHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       454 G~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~~~~~k~v~~~~  502 (543)
                      |+|+||+++.+...+.+||||+|.||+|+ .+|++++++|++.|+|+++.
T Consensus       938 G~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~  987 (1001)
T 3haz_A          938 GNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT  987 (1001)
T ss_dssp             SEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred             eeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence            99999998876667789999999999994 67899999999999998865

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.4e-82  Score=670.44  Aligned_cols=417  Identities=20%  Similarity=0.216  Sum_probs=336.0

Q ss_pred             ccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc-------CC
Q 009109           47 SCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDL-------SK  119 (543)
Q Consensus        47 ~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~et-------Gk  119 (543)
                      -|+||.||++++.+ +.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++++++|++++++|+       ||
T Consensus        10 ~~~~P~tg~~~~~~-~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk   88 (463)
T 2h5g_A           10 GVDLGTENLYFQSM-VKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA   88 (463)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCH
T ss_pred             CCcCCCCCCEEEEe-cCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCC
Confidence            35699999999777 99999999999999999999999999999999999999999999999999999999       69


Q ss_pred             Ccc----hhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhh
Q 009109          120 PPF----ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIA  195 (543)
Q Consensus       120 ~~~----ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALa  195 (543)
                      |+.    ++. .|+..+++.++++++.++++.+.. ........+...++.++|+|||++|+||| |.... +++++||+
T Consensus        89 ~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa  164 (463)
T 2h5g_A           89 PLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRV-LRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA  164 (463)
T ss_dssp             HHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCE-EEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred             chhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcc-cccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence            987    465 599999999999998888776543 11110012335688999999999999777 77666 89999999


Q ss_pred             cCCEEEEeCCCCChHHHHHHHHHHhhhc----CCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccC
Q 009109          196 AGNAVVLKPSEIAPATSSLLAKLLEDYV----DNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLT  270 (543)
Q Consensus       196 aGN~VVlKps~~~p~~~~~l~~~l~~al----P~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~  270 (543)
                      +||+||+|||+.+|+++.+|++++.+++    |+|+||+|+|+.+.++.|+.|+ ||+|+||||+.+|+.|++.++  +|
T Consensus       165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~  242 (463)
T 2h5g_A          165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GI  242 (463)
T ss_dssp             HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SS
T ss_pred             cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CC
Confidence            9999999999999999999999999985    5999999999667899999997 999999999999999999888  89


Q ss_pred             cEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccc
Q 009109          271 PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSR  350 (543)
Q Consensus       271 ~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gp  350 (543)
                      |+++|||||||+||++|||++.|++.+++++| .| ||.|++++|||||+++||                        ||
T Consensus       243 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~rvlV~~~i~d------------------------~p  296 (463)
T 2h5g_A          243 PVMGHSEGICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALETLLIHRDLLR------------------------TP  296 (463)
T ss_dssp             CBCSCSCCCEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEEEEEEEGGGTT------------------------SH
T ss_pred             CEEEecCCcceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCcEEEEeccccc------------------------hH
Confidence            99999999999999999999999999999999 98 999999999999999998                        23


Q ss_pred             cCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCC
Q 009109          351 IVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP  429 (543)
Q Consensus       351 li~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~  429 (543)
                      +     +++   +++++.+ +++++.|+.....++|+        +++|++++||+||||++|++|+|+||||+++|+++
T Consensus       297 ~-----~~~---~i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~  360 (463)
T 2h5g_A          297 L-----FDQ---IIDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYG  360 (463)
T ss_dssp             H-----HHH---HHHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHC
T ss_pred             H-----HHH---HHHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCC
Confidence            2     222   3555543 56887554433335443        57899999999999999999999999999999999


Q ss_pred             CCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC--Cc--chHHHHHHhhhceEEEEecCCC
Q 009109          430 KPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG--SY--HGKFSFDAFSHKKAVLYRSFNG  505 (543)
Q Consensus       430 ~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~--~g~~~~~~~~~~k~v~~~~~~~  505 (543)
                      +||++||||+|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|  ++  +|.+|+++|++.|+|.++.   
T Consensus       361 ~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~---  435 (463)
T 2h5g_A          361 SSHTDVIVTEDENTAEFFLQHVDSACVFWNASTR--FSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK---  435 (463)
T ss_dssp             CSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG--GCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS---
T ss_pred             CCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCcc--CCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC---
Confidence            9999999999999999999999999999998765  3678999999999999  76  8999999999999998864   


Q ss_pred             CCCCcCCCCChHHH
Q 009109          506 DSTTRYPPYTAEKQ  519 (543)
Q Consensus       506 ~~~~~~~p~~~~~~  519 (543)
                       ...+ |||+..|.
T Consensus       436 -~~~r-~~y~~~~~  447 (463)
T 2h5g_A          436 -DHVV-SDFSEHGS  447 (463)
T ss_dssp             -SCCG-GGGSTTSS
T ss_pred             -Cccc-CCccccch
Confidence             2344 78886543

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=100.00  E-value=4.8e-81  Score=661.31  Aligned_cols=405  Identities=18%  Similarity=0.224  Sum_probs=327.6

Q ss_pred             HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCc----chhhHHHHHH-HHHHHHHHHHH
Q 009109           68 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFISEISM-TKSSCKLALKE  142 (543)
Q Consensus        68 dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~----~ea~~~Ev~~-~~~~l~~~~~~  142 (543)
                      .+++|+++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||.    .++...|+.. +++.++++++.
T Consensus        15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~   94 (468)
T 1vlu_A           15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG   94 (468)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999998    8886569999 99999999999


Q ss_pred             HhhhcCCCc--ccc-cCc--CCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHH
Q 009109          143 LKYWTKPEK--AKT-SLT--TYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAK  217 (543)
Q Consensus       143 ~~~~~~~~~--~~~-~~~--~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~  217 (543)
                      ++++.....  ... +..  ..+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|+++..+++
T Consensus        95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~  172 (468)
T 1vlu_A           95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK  172 (468)
T ss_dssp             HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred             HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence            988864321  011 100  11335688999999999999999 9 9999999999999999999999999999999999


Q ss_pred             HHh----h----h-cCCCceEeecCCh-HHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcC
Q 009109          218 LLE----D----Y-VDNSAVRVVEGAV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS  286 (543)
Q Consensus       218 ~l~----~----a-lP~gvv~vv~g~~-~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~  286 (543)
                      ++.    +    + +|+|+||+|+ +. +.++.|+.|+ ||+|+||||+++|+.|++.+   +||+++|+|||||+||++
T Consensus       173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~  248 (468)
T 1vlu_A          173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE  248 (468)
T ss_dssp             HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred             HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence            995    7    7 9999999999 54 6789999997 99999999999999999877   699999999999999999


Q ss_pred             CCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcC---CCCCCCCcccccCCHHHHHHHHHH
Q 009109          287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG---KNPMESKDLSRIVNPFHFARLASL  363 (543)
Q Consensus       287 daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~---g~~~~~~~~gpli~~~~~~~~~~~  363 (543)
                      |||++.|++.+++++| +|+| .|++++|||||+++ |+|+++|+++++++++   |||.+                .++
T Consensus       249 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------~~~  309 (468)
T 1vlu_A          249 DADLIKAKRISLDAKT-NYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------KTA  309 (468)
T ss_dssp             TCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------HHH
T ss_pred             CCCHHHHHHHHHHHhc-CCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------hcc
Confidence            9999999999999999 9999 99999999999999 9999999999999986   66521                344


Q ss_pred             -HHhhhcCCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHH
Q 009109          364 -LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQ  442 (543)
Q Consensus       364 -i~~a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~  442 (543)
                       ++++.   ++++||+    |  ++||++  ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus       310 ~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~  378 (468)
T 1vlu_A          310 YFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKA  378 (468)
T ss_dssp             HHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHH
T ss_pred             cccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHH
Confidence             55544   3566775    4  789997  7889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccceeEEECCCcccCCCCCCCcc-----cCCCCCCCCcchHHHHHHhhhceEEEEecCCCCCCCcCCCCCh
Q 009109          443 MKKEFVQNISAGGIVFNDTIVHTTVSSLPFG-----GVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTA  516 (543)
Q Consensus       443 ~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfG-----G~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~~~~~~~~p~~~  516 (543)
                      .++++++++++|+|+||++..  ..+.+|||     |+|.||+|++ |.+|+++|++.|+|..+.    ...+ |||+.
T Consensus       379 ~a~~~~~~l~aG~V~vN~~~~--~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~----~~~r-~py~~  449 (468)
T 1vlu_A          379 NAEKFMKGVDSSGVYWNASTR--FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD----GQVA-SDYLG  449 (468)
T ss_dssp             HHHHHHHHCCCSEEEESSCGG--GCC-----------------------CCSGGGEEEEEEEECS----SCCS-CCC--
T ss_pred             HHHHHHHhCCeeEEEEcCCCC--CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC----CCcC-ccccc
Confidence            999999999999999998775  35788999     9999999999 999999999999998764    2445 89983

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=100.00  E-value=4.4e-79  Score=647.91  Aligned_cols=412  Identities=16%  Similarity=0.212  Sum_probs=362.2

Q ss_pred             cCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHH
Q 009109           62 QRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALK  141 (543)
Q Consensus        62 ~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~  141 (543)
                      +.++.+|+++++++|++||+.|+.+++++|.++|++++++|++++++|++++++|+||+..+++..+...+++.+.    
T Consensus         7 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~----   82 (464)
T 3k9d_A            7 DLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY----   82 (464)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH----
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH----
Confidence            3468899999999999999999999999999999999999999999999999999999999886545444444333    


Q ss_pred             HHhhhcCCCcc-cccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHH--
Q 009109          142 ELKYWTKPEKA-KTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL--  218 (543)
Q Consensus       142 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~--  218 (543)
                         .|++.... .......+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++  
T Consensus        83 ---~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~  159 (464)
T 3k9d_A           83 ---NYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIIS  159 (464)
T ss_dssp             ---HHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred             ---HhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHH
Confidence               33322211 111112355678899999999999999999999999999999999999999999999999886654  


Q ss_pred             --Hhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecC-CCCcEEEcCCCCHHH
Q 009109          219 --LEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELG-GKSPAVVDSTINLQV  292 (543)
Q Consensus       219 --l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelg-G~~p~iV~~daDl~~  292 (543)
                        +.++ +|+|+||+|+| +.+.++.|++|+ ||+|+||||+.    +++++++++||+ +|+| ||+|+||++|||++.
T Consensus       160 ~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~  234 (464)
T 3k9d_A          160 EAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSANIPR  234 (464)
T ss_dssp             HHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred             HHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCCCHHH
Confidence              5677 99999999999 688999999997 99999999997    466778899999 7888 999999999999999


Q ss_pred             HHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH-------HhhcCCCCC--CCCcccccCCHHHHHHHHHH
Q 009109          293 TTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL-------KEFFGKNPM--ESKDLSRIVNPFHFARLASL  363 (543)
Q Consensus       293 aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~-------~~l~~g~~~--~~~~~gpli~~~~~~~~~~~  363 (543)
                      |++.+++++| +|+||.|++++|||||+++||+|+++|+++.       +.+++|+|.  +++++||+++.++++++.++
T Consensus       235 Aa~~i~~~~~-~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~  313 (464)
T 3k9d_A          235 AVKHILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL  313 (464)
T ss_dssp             HHHHHHHHHT-GGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHH
T ss_pred             HHHHHHHHHh-cCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHH
Confidence            9999999999 9999999999999999999999999999985       456677774  36789999999999999999


Q ss_pred             HHhhhc-CCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHH----HHHHcCCCCcEEEEec
Q 009109          364 LDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSF----DVIKSKPKPLAAYFFS  438 (543)
Q Consensus       364 i~~a~~-~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~a~i~t  438 (543)
                      ++.+.. ++++++||..             ++++++++. +|+||||++|++|+|+||||    +++|+++|||++||||
T Consensus       314 ~~~a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t  379 (464)
T 3k9d_A          314 AGLTVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHS  379 (464)
T ss_dssp             TTCCCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEEC
T ss_pred             hhhhhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEe
Confidence            988764 6799998853             567788865 89999999999999999997    7999999999999999


Q ss_pred             CCHHHHHHHHhhccceeEEECCCccc-------CCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEEEe
Q 009109          439 DDEQMKKEFVQNISAGGIVFNDTIVH-------TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYR  501 (543)
Q Consensus       439 ~d~~~~~~~~~~l~~G~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~  501 (543)
                      +|.+.++++++++++|+|+||+++.+       ...+.+|||| +.+|.|+++|..|+++|++.|+|...
T Consensus       380 ~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~  448 (464)
T 3k9d_A          380 EDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG  448 (464)
T ss_dssp             SCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred             CCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence            99999999999999999999998764       2578999999 78999999999999999999999764

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=100.00  E-value=9.2e-77  Score=626.22  Aligned_cols=389  Identities=18%  Similarity=0.240  Sum_probs=326.4

Q ss_pred             HHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCc----chhhHH-------HHHHHHH
Q 009109           66 VEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFIS-------EISMTKS  134 (543)
Q Consensus        66 ~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~----~ea~~~-------Ev~~~~~  134 (543)
                      .+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+||+.    .++...       |+..+++
T Consensus        25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~  104 (444)
T 4ghk_A           25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE  104 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999985    466532       6778888


Q ss_pred             HHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHH
Q 009109          135 SCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL  214 (543)
Q Consensus       135 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~  214 (543)
                      .+++++...+. . ....+......+...+++++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++.+
T Consensus       105 ~l~~~a~~~~~-~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~  180 (444)
T 4ghk_A          105 GLRQVATLPDP-I-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA  180 (444)
T ss_dssp             HHHHHHHSCCC-T-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred             HHHHHHhhccc-c-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence            88877664332 1 11111100113456789999999999999998 8 6889999999999999999999999999999


Q ss_pred             HHHHH----hhh-cCCCceEeecC-ChH-HHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcC
Q 009109          215 LAKLL----EDY-VDNSAVRVVEG-AVA-ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS  286 (543)
Q Consensus       215 l~~~l----~~a-lP~gvv~vv~g-~~~-~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~  286 (543)
                      +++++    .++ +|+|+||+|+| +.+ .+..|..|+ ||+|+||||+.+|+.+++.+   +||+++|||||||+||++
T Consensus       181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~  257 (444)
T 4ghk_A          181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD  257 (444)
T ss_dssp             HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred             HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence            99997    567 99999999998 554 677777786 99999999999999998876   699999999999999999


Q ss_pred             CCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcC---CCCCCCCcccccCCHHHHHHHHHH
Q 009109          287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG---KNPMESKDLSRIVNPFHFARLASL  363 (543)
Q Consensus       287 daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~---g~~~~~~~~gpli~~~~~~~~~~~  363 (543)
                      |||++.|++.+++++| .|+| .|++++|||||+++||+|+++|+++++++++   |||.                ..++
T Consensus       258 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~----------------~~~~  319 (444)
T 4ghk_A          258 RASVTKALTVCDNAKT-HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD----------------ARAV  319 (444)
T ss_dssp             TCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH----------------HHHH
T ss_pred             CCCHHHHHHHHHHHhc-CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH----------------HHHH
Confidence            9999999999999999 9999 9999999999999999999999999999987   6541                2456


Q ss_pred             HHhhhcCCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHH
Q 009109          364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQM  443 (543)
Q Consensus       364 i~~a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~  443 (543)
                      ++++..             |      ++  ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.
T Consensus       320 i~~a~~-------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~  378 (444)
T 4ghk_A          320 LEAAGV-------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDR  378 (444)
T ss_dssp             HHHTTC-------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHH
T ss_pred             HHhccc-------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHH
Confidence            665431             2      12  35678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC----CcchHHHHHHhhhceEEEEec
Q 009109          444 KKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG----SYHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       444 ~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~v~~~~  502 (543)
                      ++++++++++|+|+||+++.  ..+.+||||.+.||+|    +++|.+|+++||+.|+|++..
T Consensus       379 a~~~a~~l~aG~V~vN~~~~--~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~  439 (444)
T 4ghk_A          379 AMRFLREVDSASVMVNASTR--FADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH  439 (444)
T ss_dssp             HHHHHHHCCSSEEEEEECGG--GCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred             HHHHHHhCCcceEEEcCCCc--cCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence            99999999999999999875  3578999999999998    688999999999999998764

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.7e-76  Score=626.04  Aligned_cols=405  Identities=16%  Similarity=0.212  Sum_probs=331.9

Q ss_pred             cCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHH
Q 009109           62 QRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALK  141 (543)
Q Consensus        62 ~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~  141 (543)
                      +.++.+|+++++++|++||+.|+.+++++|.++|++++++|++++++|++++++|+|||..+++..|+..+.+.+.    
T Consensus         2 ~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~----   77 (452)
T 3my7_A            2 PVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIY----   77 (452)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH----
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH----
Confidence            5689999999999999999999999999999999999999999999999999999999999997656666655552    


Q ss_pred             HHhhhcCCCccc-ccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHh
Q 009109          142 ELKYWTKPEKAK-TSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE  220 (543)
Q Consensus       142 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~  220 (543)
                         +++...... ......+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus        78 ---~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~  154 (452)
T 3my7_A           78 ---NKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVL  154 (452)
T ss_dssp             ---HHHTTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred             ---HHhhhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHH
Confidence               122221111 1111223456889999999999999999999999999999999999999999999999999888876


Q ss_pred             ----hh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHH
Q 009109          221 ----DY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVT  293 (543)
Q Consensus       221 ----~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~a  293 (543)
                          ++ +|+|+||+|+| +.+.+++|++|+ ||+|+||||+.+    .+++++++||+++|+|||||+||++|||++.|
T Consensus       155 ~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~----~~~a~~~~kp~~~e~gG~~p~iV~~dADl~~A  230 (452)
T 3my7_A          155 DAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGM----VKAAYSSGKPAIGVGAGNVPVVIDETADIKRA  230 (452)
T ss_dssp             HHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHH----HHHHHTSSSCEEECC--CEEEEECTTSCHHHH
T ss_pred             HHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHH----HHHHHhcCCCEEecCCCCCeEEEeCCCCHHHH
Confidence                56 99999999999 778999999996 999999999985    45677889999999999999999999999999


Q ss_pred             HHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhc-CCE
Q 009109          294 TRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV-SDK  372 (543)
Q Consensus       294 a~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~  372 (543)
                      ++.+++++| +|+||.|+++++||||+++||+|+++|+++              +||++++.+.+++.++++++.. +++
T Consensus       231 a~~iv~s~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~a~  295 (452)
T 3my7_A          231 VASVLMSKT-FDNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALNAK  295 (452)
T ss_dssp             HHHHHHGGG-GGGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred             HHHHHHHHh-CCCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence            999999999 999999999999999999999999999875              4899999999999999986543 445


Q ss_pred             EEECcccC----CCCceeeceE-------eeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCC----CCcEEEEe
Q 009109          373 IVYGGQRD----EKQLKIAPTI-------LLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKP----KPLAAYFF  437 (543)
Q Consensus       373 v~~gg~~~----~~g~~~~Ptv-------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~a~i~  437 (543)
                      + +||...    ..|+|++||+       +.++++++++++ |+||||++|++|+|+||||+++|++.    |||+++||
T Consensus       296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~  373 (452)
T 3my7_A          296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLY  373 (452)
T ss_dssp             G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEE
T ss_pred             E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEE
Confidence            5 476542    3589999997       778999999876 89999999999999999999999974    99999999


Q ss_pred             cCCHHHHHH---HHhhccceeEEECCCcccCCCCCCCcccCCC-----------CCCCCcchHHHHHHhhhceEEEEec
Q 009109          438 SDDEQMKKE---FVQNISAGGIVFNDTIVHTTVSSLPFGGVGE-----------SGMGSYHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       438 t~d~~~~~~---~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~-----------SG~G~~~g~~~~~~~~~~k~v~~~~  502 (543)
                      |+|.+.+++   +++++++|+|+||++..        |||+|.           -|+|.++|...-++.+..+.+++++
T Consensus       374 t~d~~~a~~i~~~a~~l~~G~V~VN~~~~--------~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~  444 (452)
T 3my7_A          374 TNQDVNADRIRYFGDKMKTARILINIPTT--------HGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKT  444 (452)
T ss_dssp             SCTTTCHHHHHHHHHHCCCSEEEESCCCC------------------------------------CCCCCGGGGEEEEE
T ss_pred             cCCHHHHHHHHHHHHhCCEEEEEECCCCC--------CcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeE
Confidence            999877777   99999999999998754        665553           2778887776555555555554443

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=100.00  E-value=1.6e-76  Score=621.46  Aligned_cols=389  Identities=17%  Similarity=0.268  Sum_probs=335.5

Q ss_pred             CCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCc----chhhH-------HHHHHH
Q 009109           64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFI-------SEISMT  132 (543)
Q Consensus        64 a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~----~ea~~-------~Ev~~~  132 (543)
                      -..+++++++++|++||+.|+.+|..+|.++|++++++|++++++|++++++|+||+.    .++..       .|+..+
T Consensus        11 ~~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~   90 (427)
T 1o20_A           11 HHMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM   90 (427)
T ss_dssp             ---CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence            3456899999999999999999999999999999999999999999999999999985    56542       488899


Q ss_pred             HHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHH
Q 009109          133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS  212 (543)
Q Consensus       133 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~  212 (543)
                      ++.++++++..+. . ...........+...+++++|+|||++|+|||  +.++++++++||++||+||+|||+.+|+++
T Consensus        91 ~~~l~~~a~~~~~-~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~  166 (427)
T 1o20_A           91 IKACETVIGLKDP-V-GEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSN  166 (427)
T ss_dssp             HHHHHHHHHSCCC-T-TCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHH
T ss_pred             HHHHHHHHhcccc-c-CccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHH
Confidence            9999888764432 1 11111000012344688999999999999886  478999999999999999999999999999


Q ss_pred             HHHHHHHh----hh-cCCCceEeecC-Ch-HHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEE
Q 009109          213 SLLAKLLE----DY-VDNSAVRVVEG-AV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV  284 (543)
Q Consensus       213 ~~l~~~l~----~a-lP~gvv~vv~g-~~-~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV  284 (543)
                      .++++++.    ++ +|+|+||+|+| +. +.++.|..|+ +|+|+||||+++|+.|++.+   +||+++|||||||+||
T Consensus       167 ~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV  243 (427)
T 1o20_A          167 KAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFV  243 (427)
T ss_dssp             HHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEE
Confidence            99999998    55 89999999998 54 4677777786 99999999999999999887   5999999999999999


Q ss_pred             cCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHH
Q 009109          285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLL  364 (543)
Q Consensus       285 ~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i  364 (543)
                      ++|||++.|++.+++++| .|+| .|++++|||||+++||+|+++|++++++++++                        
T Consensus       244 ~~dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------  297 (427)
T 1o20_A          244 DESADLKKAVPVIINAKT-QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------  297 (427)
T ss_dssp             CTTSCHHHHHHHHHHHHH-SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE------------------------
T ss_pred             eCCCCHHHHHHHHHHHhc-cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe------------------------
Confidence            999999999999999999 9999 99999999999999999999999999987531                        


Q ss_pred             HhhhcCCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHH
Q 009109          365 DEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMK  444 (543)
Q Consensus       365 ~~a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~  444 (543)
                               ++||... .+ |+ |||   ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+
T Consensus       298 ---------~~gg~~~-~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a  362 (427)
T 1o20_A          298 ---------VRGCEKT-RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNA  362 (427)
T ss_dssp             ---------EEECHHH-HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHH
T ss_pred             ---------eecChhh-hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHH
Confidence                     1233221 12 34 885   345789999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCC----CcchHHHHHHhhhceEEEEec
Q 009109          445 KEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMG----SYHGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       445 ~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~v~~~~  502 (543)
                      +++++++++|+|+||++..  ..+.+||||.|.||+|    +++|.+|+++|++.|+|.+..
T Consensus       363 ~~~~~~l~~G~V~iN~~~~--~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~  422 (427)
T 1o20_A          363 KKFVSEIDAAAVYVNASTR--FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE  422 (427)
T ss_dssp             HHHHHHCCSSEEEESSCGG--GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred             HHHHHhCCccEEEECCCCc--cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence            9999999999999998765  4678999999999997    467999999999999998764

>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}

Probab=97.38  E-value=0.12  Score=52.26  Aligned_cols=258  Identities=17%  Similarity=0.206  Sum_probs=144.4

Q ss_pred             CCCcceEEeecceEEEEEcCCc---hhhhhhhhHHHHHhhcCCEE--EEeCCCCChHHH--HHHHHHHhhhcCCCceEee
Q 009109          159 YPSSAEIISEPLGVVLVISTWN---YPFLLSLDPVIGAIAAGNAV--VLKPSEIAPATS--SLLAKLLEDYVDNSAVRVV  231 (543)
Q Consensus       159 ~~~~~~~~~~P~GVv~~i~p~N---~P~~~~~~~~~~ALaaGN~V--VlKps~~~p~~~--~~l~~~l~~alP~gvv~vv  231 (543)
                      .|.....++.|+--|++..|.-   ||- +.+..++||-.+|+.=  +.-|.+......  ...+.++      |+=.+.
T Consensus       119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~l~------Gv~eIy  191 (423)
T 4gic_A          119 DGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAAYIS------GVDRVF  191 (423)
T ss_dssp             TSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHHHHH------TCCEEE
T ss_pred             CCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHHHhc------CCcEEE
Confidence            3445667899999999999944   664 4455688999999873  333433211111  1112222      333333


Q ss_pred             c-CChHHHHHHHh---C--CCCEEEEeCChHHHHHHHHHHhcccCcEEEe-cCCCCcEEE--cCCCCHHHHHHHHHHhhc
Q 009109          232 E-GAVAETSALLE---Q--KWDKILYTGSPRVGRIVMAAAAKHLTPVILE-LGGKSPAVV--DSTINLQVTTRRIIAGKW  302 (543)
Q Consensus       232 ~-g~~~~~~~L~~---~--~v~~v~ftGS~~~g~~i~~~a~~~~~~~~le-lgG~~p~iV--~~daDl~~aa~~iv~~~~  302 (543)
                      . |+.....+|.-   .  +||.|+=.|..-+...=..-..    .|-.. ..|.+=+.|  +++||.+..+..++.-+=
T Consensus       192 ~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g----~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAE  267 (423)
T 4gic_A          192 RIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG----QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAE  267 (423)
T ss_dssp             CCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT----TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHT
T ss_pred             EcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC----CcCcccccccceEEEEeCCCCCHHHHHHHHHHhhc
Confidence            3 45555556652   2  3999998887654322111111    12111 234443333  567999999999887765


Q ss_pred             ccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCC
Q 009109          303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEK  382 (543)
Q Consensus       303 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~  382 (543)
                       .+.     ..+.++|..+  ++|.+++.+++.+....-|             ..+...+-+++                
T Consensus       268 -Hd~-----~a~~iLvT~s--~~la~~V~~~i~~~l~~l~-------------r~~i~~~sl~~----------------  310 (423)
T 4gic_A          268 -HDE-----DAQAILISPD--AAHLEAVQASIERLLPGME-------------RAEVIRTSLER----------------  310 (423)
T ss_dssp             -TCT-----TCEEEEEESC--HHHHHHHHHHHHHHGGGCT-------------THHHHHHHHHH----------------
T ss_pred             -cCC-----CCeEEEEeCc--HHHHHHHHHHHHHHHhhCc-------------cHHHHHHHHhc----------------
Confidence             222     2235667666  5666666666655431111             11111111210                


Q ss_pred             CceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc-ceeEEECCC
Q 009109          383 QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNIS-AGGIVFNDT  461 (543)
Q Consensus       383 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~-~G~v~iN~~  461 (543)
                                             +|   .++.++|++|+++++|..--- -.-|.++|+.   .+..+++ +|.|++..+
T Consensus       311 -----------------------~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaIFlG~~  360 (423)
T 4gic_A          311 -----------------------RG---GMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESIRNAGAIFMGRY  360 (423)
T ss_dssp             -----------------------HC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGCCCCSEEEEC--
T ss_pred             -----------------------Cc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhCcEeceeecCCC
Confidence                                   11   244569999999999985322 4677888875   4666665 899999875


Q ss_pred             ccc-------CCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          462 IVH-------TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       462 ~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      +.-       ..++-+|-     +|+.|+.+..+...|...-++.
T Consensus       361 tp~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s~~  400 (423)
T 4gic_A          361 TAEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSSLI  400 (423)
T ss_dssp             --------------CCCC-----TTGGGTCCCCCGGGGEEEEEEE
T ss_pred             CchhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeeeEE
Confidence            421       12222333     4667777777888888776654

>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A

Probab=96.30  E-value=1.1  Score=45.26  Aligned_cols=281  Identities=17%  Similarity=0.192  Sum_probs=156.9

Q ss_pred             HHHHHHHHHhhhcCCCcccc-cC-cCCCCcceEEeecceEEEEEcCC---chhhhhhhhHHHHHhhcCCEEEEe--CCCC
Q 009109          135 SCKLALKELKYWTKPEKAKT-SL-TTYPSSAEIISEPLGVVLVISTW---NYPFLLSLDPVIGAIAAGNAVVLK--PSEI  207 (543)
Q Consensus       135 ~l~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~P~GVv~~i~p~---N~P~~~~~~~~~~ALaaGN~VVlK--ps~~  207 (543)
                      .|+...++++.+-..+.... .. ...|.....++.|+--|++..|.   -|| ++.+..++||-.+|+.=|+-  |+.-
T Consensus        87 ai~~A~~nI~~fH~~Q~~~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~i  165 (434)
T 1kae_A           87 AMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPPI  165 (434)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSSC
T ss_pred             HHHHHHHHHHHHHHHhcCCCceEEecCCcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCCC
Confidence            34444555555444442221 11 11234455678999999999996   466 45555688999999876544  4322


Q ss_pred             ChHHHHHHHHHHhhhcCCCceEeec-CChHHHHHHH---hC--CCCEEEEeCChHHHH--HHHHHHhcccCcEEE-ecCC
Q 009109          208 APATSSLLAKLLEDYVDNSAVRVVE-GAVAETSALL---EQ--KWDKILYTGSPRVGR--IVMAAAAKHLTPVIL-ELGG  278 (543)
Q Consensus       208 ~p~~~~~l~~~l~~alP~gvv~vv~-g~~~~~~~L~---~~--~v~~v~ftGS~~~g~--~i~~~a~~~~~~~~l-elgG  278 (543)
                      .|.+ ...+.+      .|+=.+.. |+.....+|.   ..  +||.|+=.|..-+..  ++...  ..+ .|-. -..|
T Consensus       166 ~p~i-L~AA~l------~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~--~~G-~VgIDm~AG  235 (434)
T 1kae_A          166 ADEI-LYAAQL------CGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ--RLD-GAAIDMPAG  235 (434)
T ss_dssp             CHHH-HHHHHH------TTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHH--CTT-SCEESCCCC
T ss_pred             CHHH-HHHHHH------cCCCEEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHh--hcC-ccccCCCCC
Confidence            2222 111122      13323332 4555555555   22  399999888764432  22111  111 1211 1244


Q ss_pred             CCcEEE--cCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHH
Q 009109          279 KSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFH  356 (543)
Q Consensus       279 ~~p~iV--~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~  356 (543)
                      .+=+.|  +++||.+..+..++.-+= .+.     ..+.++|..+  +++.+++.+++++....-|             .
T Consensus       236 PSEilViAD~tAnp~~vAaDLLsQAE-Hd~-----~a~aiLvT~s--~~la~~V~~ev~~ql~~lp-------------r  294 (434)
T 1kae_A          236 PSEVLVIADSGATPDFVASDLLSQAE-HGP-----DSQVILLTPA--ADMARRVAEAVERQLAELP-------------R  294 (434)
T ss_dssp             CCEEEEEECTTSCHHHHHHHHHHHHT-TCT-----TCEEEEEESC--HHHHHHHHHHHHHHHTTCT-------------T
T ss_pred             CceEEEEeCCCCCHHHHHHHHHHHhc-cCC-----CCcEEEEECC--HHHHHHHHHHHHHHHHhCC-------------h
Confidence            553333  567999999999887765 222     2345666665  5566666666555431111             0


Q ss_pred             HHHHHHHHHhhhcCCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEE
Q 009109          357 FARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYF  436 (543)
Q Consensus       357 ~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i  436 (543)
                      .+    .+.++.                                      ..- .++.++|++||++++|..--= -.-|
T Consensus       295 ~~----ia~~sl--------------------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel  330 (434)
T 1kae_A          295 AE----TARQAL--------------------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLII  330 (434)
T ss_dssp             HH----HHHHHH--------------------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEE
T ss_pred             HH----HHHHHH--------------------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhh
Confidence            11    111111                                      112 356679999999999985333 4678


Q ss_pred             ecCCHHHHHHHHhhcc-ceeEEECCCccc-------CCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          437 FSDDEQMKKEFVQNIS-AGGIVFNDTIVH-------TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       437 ~t~d~~~~~~~~~~l~-~G~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      .++|+.   .+..+++ +|.|++..++.-       ..++-+|-+     |+.|+.+..+++.|...-++.
T Consensus       331 ~~~dp~---~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~-----G~AR~~sgLsV~~F~K~~s~~  393 (434)
T 1kae_A          331 QTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTY-----GYTATCSSLGLADFQKRMTVQ  393 (434)
T ss_dssp             ESTTHH---HHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCT-----TGGGTCCCSCGGGGEEEEEEE
T ss_pred             hhcCHH---HHHhhcCcccchhcCCCCchhhcccccCCCcccCCC-----CceeccCCCcHHhccceeeEE
Confidence            898874   4556654 799999975421       234445554     456777777788888876654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	543
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-99
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	8e-93
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	5e-92
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-88
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	9e-78
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-64
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	3e-60
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	8e-53
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	8e-27
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-17
d1vlua_	436	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	7e-13

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  305 bits (781), Expect = 4e-99
 Identities = 200/453 (44%), Positives = 288/453 (63%), Gaps = 10/453 (2%)

Query: 66  VEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125
           +      +K  R  +NS KT+S ++R+ Q++++  MI E  + I  A+  DL K  + ++
Sbjct: 2   ISDT---VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSY 58

Query: 126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLL 185
             E++         +KEL  W + E    +  T      I SEPLGVVLVI  WNYPF L
Sbjct: 59  YEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNL 118

Query: 186 SLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQK 245
           ++ P++GA+AAGNAV+LKPSE++   + LLA L+  Y+D +   VV+G V ET+ LL+++
Sbjct: 119 TIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKER 178

Query: 246 WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMAN 305
           +D I+YTGS  VG+IVMAAAAKHLTPV LELGGKSP  VD   +L V  RRI  GK+M N
Sbjct: 179 FDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM-N 237

Query: 306 NGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD 365
           +GQ C+  DYI+       ++++ L+  LK+F+G++  +S+D  RI+N  HF R+     
Sbjct: 238 SGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRV----K 293

Query: 366 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVI 425
               + K+ +GG  D+    IAPTIL+DV   S +M+EEIFGP++PIV V  +E++   I
Sbjct: 294 GLIDNQKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFI 353

Query: 426 KSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHG 485
             + KPLA Y FS++E++ K+ +   S+GG+  ND IVH TV +LPFGGVG SGMG+YHG
Sbjct: 354 NQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHG 413

Query: 486 KFSFDAFSHKKAVLYRSFNGDSTT--RYPPYTA 516
           K SF+ FSH+++ L +S   +     RYPP  A
Sbjct: 414 KKSFETFSHRRSCLVKSLLNEEAHKARYPPSPA 446

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  290 bits (743), Expect = 8e-93
 Identities = 108/444 (24%), Positives = 185/444 (41%), Gaps = 14/444 (3%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           DV+KA    ++     +  +T     R   +  +A++IE     +      +  K     
Sbjct: 52  DVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNA 111

Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
           ++ ++     + +        W    + +T            SEP+GV   I  WN+P L
Sbjct: 112 YLMDLGGCIKTLRYCAG----WADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLL 167

Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLE 243
           + L  +  A++ GN VV+KP+E  P T+  +  L+++       V +V G      A + 
Sbjct: 168 MFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAIS 227

Query: 244 Q--KWDKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAG 300
                DK+ +TGS  VG+++  AA K +L  V LELGGKSP +V +  +L         G
Sbjct: 228 SHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQG 287

Query: 301 KWMANNGQACIGVDYIITTKDFAPKLID-SLRNELKEFFGKNPMESKDLSRIVNPFHFAR 359
            +  + GQ CI    +   +    + +  S+    K   G            ++   + +
Sbjct: 288 VFY-HQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEK 346

Query: 360 LASLLDEDKVS-DKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEK 417
           +  L++  K    K+  GG     K   I PT+  DV DD  I KEEIFGP+  I+  + 
Sbjct: 347 ILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKS 406

Query: 418 IEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGE 477
           ++D      +    L+A  F++D          + +G +  N        +  PFGG   
Sbjct: 407 LDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCY--SVVSAQCPFGGFKM 464

Query: 478 SGMGSYHGKFSFDAFSHKKAVLYR 501
           SG G   G++ F  ++  K V  +
Sbjct: 465 SGNGRELGEYGFHEYTEVKTVTIK 488

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  288 bits (738), Expect = 5e-92
 Identities = 108/443 (24%), Positives = 183/443 (41%), Gaps = 12/443 (2%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           DV+KA    +      +  +      R   +  +A++IE     +      D  KP   +
Sbjct: 52  DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS 111

Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
           ++ ++ M     +        W      KT        +    EP+GV   I  WN+P L
Sbjct: 112 YLVDLDMVLKCLRYYAG----WADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLL 167

Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALL- 242
           +    +  A+A GN VV+K +E  P T+  +A L+++       V +V G      A + 
Sbjct: 168 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 227

Query: 243 -EQKWDKILYTGSPRVGRIVM-AAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAG 300
             +  DK+ +TGS  +GR++  AA + +L  V LELGGKSP ++ S  ++     +    
Sbjct: 228 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 287

Query: 301 KWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARL 360
            +      +C G    +    +   +  S+        G       +    V+   F ++
Sbjct: 288 LFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 347

Query: 361 ASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKI 418
              ++  K    K++ GG    ++   I PT+  DV D  TI KEEIFGP++ I+  + I
Sbjct: 348 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 407

Query: 419 EDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGES 478
           E+      +    LAA  F+ D        Q + AG +  N        +  PFGG   S
Sbjct: 408 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY--DVFGAQSPFGGYKMS 465

Query: 479 GMGSYHGKFSFDAFSHKKAVLYR 501
           G G   G++   A++  K V  +
Sbjct: 466 GSGRELGEYGLQAYTEVKTVTVK 488

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score =  278 bits (713), Expect = 4e-88
 Identities = 107/454 (23%), Positives = 191/454 (42%), Gaps = 22/454 (4%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           +V++A   ++  +  Y      +   R   +   A +I E+ + I +    +        
Sbjct: 59  EVDQA---VQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINN-----GK 110

Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
            I+E      +    ++           +       + A    EPLGV   I  WNYPF+
Sbjct: 111 TITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFM 170

Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLE 243
           ++      A+A GNAVV KPS + P T  +LA++  +  V    V VV+G     S L  
Sbjct: 171 IAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCH 230

Query: 244 QK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW 302
                K+ +TGS   G+ VM  +AK +  V LELGGKSP ++     L+   R  +   +
Sbjct: 231 HPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF 290

Query: 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF-GKNPMESKDLSRIVNPFHFARLA 361
           +   GQ C     +   ++  P+ ++ +    K    G   +    +  +++     ++ 
Sbjct: 291 L-TQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVL 349

Query: 362 SLLDEDKVSD-KIVYGGQR-------DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413
             + + K    +++ GG+         +    ++P +L +  DD T +KEEIFGP++ ++
Sbjct: 350 GFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVL 409

Query: 414 TVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFG 473
             +  E+      +    LA+  F+ D         N+ AG    N      +   +PFG
Sbjct: 410 PFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINT--YSISPVEVPFG 467

Query: 474 GVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDS 507
           G   SG G  +G+ + D +S  K V+    + DS
Sbjct: 468 GYKMSGFGRENGQATVDYYSQLKTVIVEMGDVDS 501

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score =  250 bits (640), Expect = 9e-78
 Identities = 103/443 (23%), Positives = 182/443 (41%), Gaps = 15/443 (3%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
            V+ A   ++     +      + + R   +  +A++IEE  +   E   ++  KP    
Sbjct: 40  QVDAA---VRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSA 96

Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
           F  EI       +                        ++ I  +PLGVV  I+ WNYP +
Sbjct: 97  FNDEIPAIVDVFR---FFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLM 153

Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALL-- 242
           ++   +  A+AAGN VVLKPSEI P T+  LA+L +D      V ++ G        L  
Sbjct: 154 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTG 213

Query: 243 EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW 302
             K   +  TGS   G  +++  A  +    +ELGGK+P +V    +++     +    +
Sbjct: 214 HPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY 273

Query: 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF-GKNPMESKDLSRIVNPFHFARLA 361
             N GQ C     I   K     L++ L   +     G    ES +L  + +  H  R+ 
Sbjct: 274 Y-NAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVG 332

Query: 362 SLLDEDKVSD--KIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKI 418
             ++E K +   K++ GG++ +      APT+L     D  I+++E+FGP++ +   +  
Sbjct: 333 KAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 392

Query: 419 EDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGES 478
           E   +        LA+  ++ D          +  G    N   +   VS +P GG   S
Sbjct: 393 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML--VSEMPHGGQKLS 450

Query: 479 GMGSYHGKFSFDAFSHKKAVLYR 501
           G G     +  + ++  + V+ +
Sbjct: 451 GYGKDMSLYGLEDYTVVRHVMVK 473

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score =  215 bits (549), Expect = 2e-64
 Identities = 98/440 (22%), Positives = 189/440 (42%), Gaps = 12/440 (2%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           +V+         +    + +  SY  R + +  +A+++   +E+I   + K+++K     
Sbjct: 40  EVDYV---YASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA 96

Query: 125 FISEISMTKS-SCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPF 183
               +   +  +              E       +    A +  EP+G+VL IS +NYP 
Sbjct: 97  VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 156

Query: 184 LLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED-YVDNSAVRVVEGAVAETSALL 242
            L+   +  A+ AGN +  KP      +  LLA+   +  +       + G  +E    +
Sbjct: 157 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYI 216

Query: 243 --EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAG 300
              Q  + I +TGS  +G  +   A   + P++LELGGK  A+V    +L++T + IIAG
Sbjct: 217 VEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAG 274

Query: 301 KWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARL 360
            +   +GQ C  V  ++  +  A +L++ +R ++      NP +  D++ +++      +
Sbjct: 275 AFG-YSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYV 333

Query: 361 ASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIED 420
             L   D          +   +   I P +   V  D  +  EE FGP+LPI+ V  +E+
Sbjct: 334 EGL-INDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEE 392

Query: 421 SFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM 480
           + ++       L A  F++D        + +  G +  N+        + PF G  +SG 
Sbjct: 393 AIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQR-GTDNFPFLGAKKSGA 451

Query: 481 GSYHGKFSFDAFSHKKAVLY 500
           G    K+S +A +  K+V++
Sbjct: 452 GIQGVKYSIEAMTTVKSVVF 471

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  205 bits (522), Expect = 3e-60
 Identities = 100/450 (22%), Positives = 180/450 (40%), Gaps = 22/450 (4%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP--F 122
           + E A   ++     + + K    E R   +   A ++  ++ E+   +  ++ K     
Sbjct: 75  EAEAA---LEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA 131

Query: 123 ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYP 182
              ++E          A    +Y                       PLG  +VI+ WN+P
Sbjct: 132 SADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNE-----SFYVPLGAGVVIAPWNFP 186

Query: 183 FLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED-YVDNSAVRVVEGAVAETSAL 241
             +    ++G +A GN V+ KP+E A    + + ++  +       V  + G   E  A 
Sbjct: 187 VAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAY 246

Query: 242 LEQ--KWDKILYTGSPRVGRIVMAAA------AKHLTPVILELGGKSPAVVDSTINLQVT 293
           L +  +   I +TGS  VG  +  AA              +E GGK+  +VD T +  + 
Sbjct: 247 LVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLA 306

Query: 294 TRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVN 353
              ++   +    GQ C     +I T+     +++ +    +        E+ DL  +V+
Sbjct: 307 AEGVVVSAYG-FQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVS 365

Query: 354 PFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTILLDVPDDSTIMKEEIFGPLLPI 412
                ++ S ++  K   ++V GG+R E +   IAPT+  +VP  + I +EEIFGP+L +
Sbjct: 366 AEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSV 425

Query: 413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPF 472
           + V+   ++ +V    P  L    +S   +  +   +    G + FN  I    V   PF
Sbjct: 426 IRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPF 485

Query: 473 GGVGESGMGSYHGKFSF-DAFSHKKAVLYR 501
           GG   SG  +  G   +   F   KAV  R
Sbjct: 486 GGFKLSGTNAKTGALDYLRLFLEMKAVAER 515

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score =  185 bits (469), Expect = 8e-53
 Identities = 87/451 (19%), Positives = 177/451 (39%), Gaps = 9/451 (1%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           +VE+   ++ +      S +      R++ ++  A++IE   +   E +  +  KP    
Sbjct: 53  EVERTLDVLFK--RGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAA 110

Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
                +         L   K          +  T  +   +  EPLGVV  I+ +NYP  
Sbjct: 111 VGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLF 170

Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQ 244
            +++ +  +   GNAVV+KPS   P  +++  K L D         +     + +  +  
Sbjct: 171 DAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVA 230

Query: 245 KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMA 304
                  + +              +   ++ELGG  PA+V    +L +   +I  G +  
Sbjct: 231 DDRVAAVSFTGSTEVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYS- 289

Query: 305 NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASL 363
             GQ C  +  ++  +    KL++ +   L      +P   + D+  +++P     + + 
Sbjct: 290 YAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAA 349

Query: 364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVP---DDSTIMKEEIFGPLLPIVTVEKIED 420
           +++       V  G R      + PT++        D  + K E+F P+   V V+ ++ 
Sbjct: 350 IEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQ 409

Query: 421 SFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM 480
           + ++   +P  L A  F  D    +  V+ +  G I  ND   H  +   PFGG  +SG+
Sbjct: 410 AIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRH-GIGYYPFGGRKKSGV 468

Query: 481 GSYHGKFSFDAFSHKKAVLYRSFNGDSTTRY 511
                 ++ +A +  K +++  + G    +Y
Sbjct: 469 FREGIGYAVEAVTAYKTIVFN-YKGKGVWKY 498

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  110 bits (275), Expect = 8e-27
 Identities = 65/461 (14%), Positives = 153/461 (33%), Gaps = 64/461 (13%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP--- 121
           ++ + A   K++R  ++  +  +   +   I+ IA  ++E+ +EI+EA   D+ K     
Sbjct: 2   ELLEKA---KKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG 58

Query: 122 -FETFISEISMTKSSCKLALKELKYWT---KPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177
             E+ +  +++        +K  +       P               I    + +  +  
Sbjct: 59  VKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGI 118

Query: 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL----LAKLLEDYVDNSAVRVVEG 233
            +     ++++  I A+ +GN ++L+    A  ++      + + L++     +      
Sbjct: 119 IYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIE 178

Query: 234 AVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVT 293
               +  L   +  + L    PR G  +++    + T  +LE G  +  +          
Sbjct: 179 NTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKK 238

Query: 294 TRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVN 353
              +I        G      + ++  +  A + +  +  EL++   +             
Sbjct: 239 AVPVIINAKTQRPGTCNA-AEKLLVHEKIAKEFLPVIVEELRKHGVEVRG---------- 287

Query: 354 PFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413
                                      EK  +I P ++    DD      E    ++ I 
Sbjct: 288 --------------------------CEKTREIVPDVVPATEDD---WPTEYLDLIIAIK 318

Query: 414 TVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFG 473
            V+ ++++ + IK      +    +++    K+FV  I A  +  N +   T      FG
Sbjct: 319 VVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGG--QFG 376

Query: 474 GVGESGMGS----YHGKFSFDAFSHKKAVLYRSFNGDSTTR 510
              E G+ +      G       +  K V+     G+   R
Sbjct: 377 FGAEIGISTQRFHARGPVGLRELTTYKFVVL----GEYHVR 413

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score = 82.5 bits (202), Expect = 2e-17
 Identities = 74/492 (15%), Positives = 157/492 (31%), Gaps = 46/492 (9%)

Query: 65  DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
           +V +AA+   ++  ++  R+  + + R S +++IA+ +E + ++II   H + + P    
Sbjct: 27  EVNQAATAAAKVARDF--RRLNNSK-RASLLRTIASELEARSDDIIARAHLETALPEVRL 83

Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAE-----IISEPLGVVLVISTW 179
              EI+ T +  +L    +   +  +    +     +             LG V V    
Sbjct: 84  TG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGAS 142

Query: 180 NYPFL--LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVE----- 232
           N+P     +      A+AAG  V++K     P TS ++A+ +E  +    +         
Sbjct: 143 NFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQ 202

Query: 233 --GAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINL 290
                   + +   +   + +TGS   GR +   A +   P+       +        + 
Sbjct: 203 GNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSA 262

Query: 291 QVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSR 350
                 +      +                            E  +   +    S  L+ 
Sbjct: 263 MRAKADLADQFVASMTMGC-GQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTP 321

Query: 351 IVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLL 410
            +   + +++ S   +D +                       +        +EEIFGP  
Sbjct: 322 GIRDSYQSQVVSRGSDDGIDVTFSQ--AESPCVASALFVTSSENWRKHPAWEEEIFGPQS 379

Query: 411 PIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKK--EFVQNI--SAGGIVFNDTIV--- 463
            IV  E + D   + +     L A   + +E   +  + +  +   AG +VFN       
Sbjct: 380 LIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVE 439

Query: 464 --HTTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNGDSTTRYPPYTAEKQKL 521
             +  V   P+     S   S  G  +   +   + V Y++      +  P         
Sbjct: 440 VGYAMVHGGPYPASTHSASTSV-GAEAIHRWL--RPVAYQAL---PESLLPD-------- 485

Query: 522 LRALFNGNIFGL 533
             +L   N   +
Sbjct: 486 --SLKAENPLEI 495

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 68.3 bits (166), Expect = 7e-13
 Identities = 48/393 (12%), Positives = 109/393 (27%), Gaps = 45/393 (11%)

Query: 84  KTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDL----SKPPFETFISEISMTKS----S 135
           KT S E R   +  I + ++     I EA   DL         ++ +  + + K      
Sbjct: 20  KTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEV 79

Query: 136 CKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIA 195
               +K++     P               +      V +++  +     +  +    +I 
Sbjct: 80  MLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIK 139

Query: 196 AGNAVVLKPSEIAPATSSLLAKLLEDY-------VDNSAVRVVEGAVAETSALLEQKWDK 248
           +GNA +LK  + +  T   +AK++ D               V      +  + L  + D+
Sbjct: 140 SGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQ-DE 198

Query: 249 ILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQ 308
            +    PR    ++          +L       ++        +  +RI           
Sbjct: 199 YIDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAG 258

Query: 309 ACIGVDYIITTK--DFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDE 366
                  +I  K   +   L +                                      
Sbjct: 259 CNAMETLLINPKFSKWWEVLENLTLEGGVTIHA--------------------------- 291

Query: 367 DKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIK 426
            K      +    +  +L  A        D+     +E     L    V   E +   I 
Sbjct: 292 TKDLKTAYFDKLNELGKLTEAIQCKTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHIN 351

Query: 427 SKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFN 459
           +          ++++   ++F++ + + G+ +N
Sbjct: 352 THSSRHTDAIVTENKANAEKFMKGVDSSGVYWN 384

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	543
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	100.0
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	100.0
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	100.0
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	100.0
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	100.0
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	100.0
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	100.0
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	100.0
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	100.0
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	100.0
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	100.0
d1k75a_	431	L-histidinol dehydrogenase HisD {Escherichia coli	97.14

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=100.00  E-value=1e-101  Score=827.56  Aligned_cols=467  Identities=25%  Similarity=0.364  Sum_probs=436.1

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMSQI   95 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~---~w~~~~~~~R~~iL   95 (543)
                      ++|+|||| +|+.+.+|++|+++        ||.||+.++++ +.++.+|++.||++|++||+   .|++++.++|.++|
T Consensus        13 ~~~~yI~G-~w~~~~s~~~~~v~--------nP~t~e~i~~v-~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL   82 (494)
T d1bxsa_          13 YTKIFINN-EWHSSVSGKKFPVF--------NPATEEKLCEV-EEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLL   82 (494)
T ss_dssp             CCSEEETT-EEECCTTCCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHH
T ss_pred             cCCEEECC-EecCCCCCCEEEee--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHH
Confidence            57999999 99999999899888        88899999765 99999999999999999996   69999999999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEE
Q 009109           96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLV  175 (543)
Q Consensus        96 ~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~  175 (543)
                      ++++++|++++++|++++++|+|||..++...|+..+++.+++++...+++....    .....+...++.++|+|||++
T Consensus        83 ~kia~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~  158 (494)
T d1bxsa_          83 NKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRT----IPMDGNFFTYTRSEPVGVCGQ  158 (494)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEE----ECCSSSEEEEEEEEECCEEEE
T ss_pred             HHHHHHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhccee----ecCCCCceeEEEEccEEEEEE
Confidence            9999999999999999999999999998766689999999999998877643221    112234567889999999999


Q ss_pred             EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEe
Q 009109          176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYT  252 (543)
Q Consensus       176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ft  252 (543)
                      |+|||||+.++++++++||++||+||+|||+.+|+++.++++++.++ ||+|+||+|+| +.+.++.|++|+ ||+|+||
T Consensus       159 I~PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fT  238 (494)
T d1bxsa_         159 IIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFT  238 (494)
T ss_dssp             ECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEE
T ss_pred             EeCccchhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEec
Confidence            99999999999999999999999999999999999999999999999 99999999999 567899999996 9999999


Q ss_pred             CChHHHHHHHHHHhc-ccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHH
Q 009109          253 GSPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR  331 (543)
Q Consensus       253 GS~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~  331 (543)
                      ||+++|+.|++.+++ ++||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|||||+++||+|+++|+
T Consensus       239 GS~~~g~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~~~d~f~~~l~  317 (494)
T d1bxsa_         239 GSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSV  317 (494)
T ss_dssp             SCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHh-cCCCcccccceEEecccchhHHHHHHHH
Confidence            999999999998885 69999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECccc-CCCCceeeceEeeCCCCCCcccccccccc
Q 009109          332 NELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGP  408 (543)
Q Consensus       332 ~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP  408 (543)
                      ++++++++|+|.+ ++++||++++.+++++.++++++++ |+++++||.. +..|+|++|||+.+++++|++++||+|||
T Consensus       318 ~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGP  397 (494)
T d1bxsa_         318 ERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGP  397 (494)
T ss_dssp             HHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSS
T ss_pred             hhhhheeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCc
Confidence            9999999999976 7799999999999999999999875 6799999875 45799999999999999999999999999


Q ss_pred             eeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHH
Q 009109          409 LLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS  488 (543)
Q Consensus       409 vl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~  488 (543)
                      |++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|
T Consensus       398 vl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~~~SG~G~~~g~~~  475 (494)
T d1bxsa_         398 VQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYG  475 (494)
T ss_dssp             EEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHH
T ss_pred             eEEEEEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCC--cCCCCCcCccccccCChhhHHHH
Confidence            9999999999999999999999999999999999999999999999999998765  46789999999999999999999


Q ss_pred             HHHhhhceEEEEec
Q 009109          489 FDAFSHKKAVLYRS  502 (543)
Q Consensus       489 ~~~~~~~k~v~~~~  502 (543)
                      +++||+.|+|+++.
T Consensus       476 ~~~ft~~k~i~~~~  489 (494)
T d1bxsa_         476 FHEYTEVKTVTIKI  489 (494)
T ss_dssp             HHTTEEEEEEEEEC
T ss_pred             HHHhcceEEEEEec
Confidence            99999999999875

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=8.6e-101  Score=819.85  Aligned_cols=467  Identities=25%  Similarity=0.365  Sum_probs=435.5

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMSQI   95 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~---~w~~~~~~~R~~iL   95 (543)
                      .+|+|||| +|+++.++++|+++        ||.||++++.+ +.++.+|+++||++|++||+   .|+++++.+|.++|
T Consensus        13 ~~~~~I~G-~w~~~~~~~~~~v~--------nP~tg~~i~~v-~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL   82 (494)
T d1o04a_          13 CNQIFINN-EWHDAVSRKTFPTV--------NPSTGEVICQV-AEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLL   82 (494)
T ss_dssp             CCSEEETT-EEECCTTCCEEEEE--------ETTTTEEEEEE-ECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHH
T ss_pred             cCCeEECC-EecCCCCCCEEEee--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHH
Confidence            36999999 99999999999988        88899999765 99999999999999999995   69999999999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEE
Q 009109           96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLV  175 (543)
Q Consensus        96 ~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~  175 (543)
                      +++++.|++++++|++++++|+|||..++...|+..++..+++++....++....    .....+...+++++|+|||++
T Consensus        83 ~~~a~~l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~  158 (494)
T d1o04a_          83 NRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT----IPIDGDFFSYTRHEPVGVCGQ  158 (494)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEE----ECCSSSEEEEEEEEECCEEEE
T ss_pred             HHHHHHHHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCce----eccCCCceeEEEEecccEEEE
Confidence            9999999999999999999999999999876699999999999998877643221    122234567889999999999


Q ss_pred             EcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEe
Q 009109          176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYT  252 (543)
Q Consensus       176 i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ft  252 (543)
                      |+|||||+.++++++++||++||+||+|||+.+|.++.++++++.++ +|+|+||+|+| +.+.++.|+.|+ ||+|.||
T Consensus       159 I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fT  238 (494)
T d1o04a_         159 IIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFT  238 (494)
T ss_dssp             ECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEE
T ss_pred             ECCcccHHHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEe
Confidence            99999999999999999999999999999999999999999999998 99999999999 567899999996 9999999


Q ss_pred             CChHHHHHHHHHHh-cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHH
Q 009109          253 GSPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR  331 (543)
Q Consensus       253 GS~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~  331 (543)
                      ||+++|+.|++.++ +++||+++||||+||+||++|||++.|++.+++++| +|+||.|++++|+|||++++|+|++.|+
T Consensus       239 GS~~~g~~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~  317 (494)
T d1o04a_         239 GSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSV  317 (494)
T ss_dssp             SCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhcc-ccCcccccccccccccchhhHHHHHHHH
Confidence            99999999998775 789999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-CCCceeeceEeeCCCCCCcccccccccc
Q 009109          332 NELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGP  408 (543)
Q Consensus       332 ~~~~~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgP  408 (543)
                      ++++++++|+|.+ .+++|||+++.+++++.++++++++ ++++++||... +.|+|++|||+.++++++++++||+|||
T Consensus       318 ~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGP  397 (494)
T d1o04a_         318 ARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGP  397 (494)
T ss_dssp             HHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSS
T ss_pred             HHhhheeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCc
Confidence            9999999999987 6789999999999999999999876 67999999764 5789999999999999999999999999


Q ss_pred             eeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHH
Q 009109          409 LLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFS  488 (543)
Q Consensus       409 vl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~  488 (543)
                      |++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.++
T Consensus       398 vl~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~~~SG~G~~~g~~~  475 (494)
T d1o04a_         398 VMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYG  475 (494)
T ss_dssp             EEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGG
T ss_pred             eEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCC--CCCCCCcCCcccccCCchhHHHH
Confidence            9999999999999999999999999999999999999999999999999998765  45789999999999999999999


Q ss_pred             HHHhhhceEEEEec
Q 009109          489 FDAFSHKKAVLYRS  502 (543)
Q Consensus       489 ~~~~~~~k~v~~~~  502 (543)
                      +++||+.|+|+++.
T Consensus       476 ~~~ft~~k~v~~~~  489 (494)
T d1o04a_         476 LQAYTEVKTVTVKV  489 (494)
T ss_dssp             GGGGEEEEEEEEEC
T ss_pred             HHHhcCeEEEEEeC
Confidence            99999999998864

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=1.3e-99  Score=811.22  Aligned_cols=467  Identities=23%  Similarity=0.342  Sum_probs=437.3

Q ss_pred             ccceeeecceecccCCcccc-cccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISF-PYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS   97 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~-~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~   97 (543)
                      ....|||| +|+++.+|+++ +++        ||.||++++.+ +.++.+|+++||++|++||+.|++++..+|.++|++
T Consensus        19 ~~~n~I~G-~~v~~~~g~~~~~V~--------nP~tge~i~~v-~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~   88 (503)
T d1a4sa_          19 DDLNYWGG-RRIKSKDGATTEPVF--------EPATGRVLCQM-VPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLE   88 (503)
T ss_dssp             SCCEEETT-EEECCCTTCCCEEEE--------CTTTCCEEEEE-CCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred             CCCeEECC-EEeCCCCCCeeeeee--------cCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence            35579999 99999988777 467        88899999776 999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEc
Q 009109           98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS  177 (543)
Q Consensus        98 ~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~  177 (543)
                      ++++|++++++|++++++|+|||+.++.. |+..+++.+++++...++.....    .....+...++.++|+|||++|+
T Consensus        89 ~a~~L~~~~eela~~~~~etGkp~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~I~  163 (503)
T d1a4sa_          89 AARIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQH----IQLPGGAFAYTRREPLGVCAGIL  163 (503)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEE----EECGGGCEEEEEEEECSEEEEEC
T ss_pred             HHHHHHHhHHHHHHHHHHhhhhcchhhhh-hhhhhhhcccccccccccccccc----cccCCCcccccccccceeeeccc
Confidence            99999999999999999999999999985 99999999999998877643322    11223456899999999999999


Q ss_pred             CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCCh
Q 009109          178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSP  255 (543)
Q Consensus       178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~  255 (543)
                      |||||+.+.++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+|+.++++.|++|+ ||+|+||||+
T Consensus       164 p~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~  243 (503)
T d1a4sa_         164 AWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSV  243 (503)
T ss_dssp             CSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCH
T ss_pred             CCCChHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCH
Confidence            999999999999999999999999999999999999999999999 99999999999989999999996 9999999999


Q ss_pred             HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109          256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK  335 (543)
Q Consensus       256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~  335 (543)
                      ++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|+|||++++++|++++.+.++
T Consensus       244 ~~G~~i~~~aa~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~-~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~  322 (503)
T d1a4sa_         244 PTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTK  322 (503)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchh-ccCCCccccCcceEEEechhhhHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999 99999999999999999999999999999999


Q ss_pred             hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccC-------CCCceeeceEeeCCCCCCcccccccc
Q 009109          336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRD-------EKQLKIAPTILLDVPDDSTIMKEEIF  406 (543)
Q Consensus       336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~-------~~g~~~~Ptvl~~~~~~~~~~~~E~f  406 (543)
                      ++++|+|.+ .+++||++++.++++++++++++.+ ++++++||...       ..|+|++|||+.+++++|++++||+|
T Consensus       323 ~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~F  402 (503)
T d1a4sa_         323 AIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIF  402 (503)
T ss_dssp             TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCC
T ss_pred             hEeeccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhcccc
Confidence            999999976 6799999999999999999999875 78999999642       36899999999999999999999999


Q ss_pred             cceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchH
Q 009109          407 GPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGK  486 (543)
Q Consensus       407 gPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~  486 (543)
                      |||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.
T Consensus       403 gPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~  480 (503)
T d1a4sa_         403 GPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI--SPVEVPFGGYKMSGFGRENGQ  480 (503)
T ss_dssp             SSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSTT
T ss_pred             CceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCC--CCCCCCccCcccCcCCcchHH
Confidence            999999999999999999999999999999999999999999999999999999775  357899999999999999999


Q ss_pred             HHHHHhhhceEEEEecC
Q 009109          487 FSFDAFSHKKAVLYRSF  503 (543)
Q Consensus       487 ~~~~~~~~~k~v~~~~~  503 (543)
                      +++++||+.|+|+++..
T Consensus       481 ~~l~~~t~~k~v~~~~~  497 (503)
T d1a4sa_         481 ATVDYYSQLKTVIVEMG  497 (503)
T ss_dssp             GGGGGSEEEEEEEECCS
T ss_pred             HHHHHhhCeEEEEEcCC
Confidence            99999999999999753

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-99  Score=807.19  Aligned_cols=466  Identities=23%  Similarity=0.347  Sum_probs=426.9

Q ss_pred             ccceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 009109           19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI   98 (543)
Q Consensus        19 ~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~   98 (543)
                      .+|+|||| +|+++ +|++++++        ||.||++++++ +.++.+|+++|+++|++||+.|+++|..+|.++|+++
T Consensus         2 ~~~l~I~G-~~v~~-~g~~~~v~--------nP~tg~~i~~v-~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~   70 (474)
T d1wnda_           2 QHKLLING-ELVSG-EGEKQPVY--------NPATGDVLLEI-AEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKL   70 (474)
T ss_dssp             CCCEEETT-EEECC-CSCEEEEE--------ETTTTEEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred             CCccEECC-eEeCC-CCCeeeeE--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence            47999999 99988 67888888        88899999765 9999999999999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcC
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST  178 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p  178 (543)
                      +++|++++++|+++++.|+|||+.++...++..+...+++++.........   .......+...+++++|+|||++|+|
T Consensus        71 a~~l~~~~~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~P~GVV~~I~p  147 (474)
T d1wnda_          71 ADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL---AAGEYLEGHTSMIRRDPLGVVASIAP  147 (474)
T ss_dssp             HHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEE---CBEEEETTEEEEEEEEECSEEEEECC
T ss_pred             HHHHHhCHHHHHHHHHHHhCCChhHhhhccccccccccccccccccccccc---ccccccCCcceEEEEecccceEEEee
Confidence            999999999999999999999999997656666666666555433322111   11112234577899999999999999


Q ss_pred             CchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChH
Q 009109          179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPR  256 (543)
Q Consensus       179 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~  256 (543)
                      ||||+.+.++++++||++||+||+|||+.+|+++.++++++++++|+|++|+|+| +.+.++.|++|+ ||+|.||||++
T Consensus       148 ~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~  227 (474)
T d1wnda_         148 WNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIA  227 (474)
T ss_dssp             SSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHH
T ss_pred             cchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHhCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHH
Confidence            9999999999999999999999999999999999999999988899999999999 567899999996 99999999999


Q ss_pred             HHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHh
Q 009109          257 VGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE  336 (543)
Q Consensus       257 ~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~  336 (543)
                      +|+.|++.+++++||+++|||||||+||++|||++.|++.+++++| +|+||.|++++|+|||+++||+|+++|++++++
T Consensus       228 ~G~~i~~~a~~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~  306 (474)
T d1wnda_         228 TGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVAT  306 (474)
T ss_dssp             HHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhhhcCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcc-cCCCcccccccccccccccchhhhhhhHHHHHh
Confidence            9999999999999999999999999999999999999999999999 999999999999999999999999999999999


Q ss_pred             hcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CC-EEEECcccC-CCCceeeceEeeCCCCCCcccccccccceeee
Q 009109          337 FFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SD-KIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI  412 (543)
Q Consensus       337 l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~-~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v  412 (543)
                      ++.|+|.+ ++++||++++.+.+++.+++++++. ++ .++.|+..+ ..|+|++|||+.++++++++++||+||||++|
T Consensus       307 l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v  386 (474)
T d1wnda_         307 LKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSV  386 (474)
T ss_dssp             CCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEE
T ss_pred             hccCCcCCCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEE
Confidence            99999977 6789999999999999999999876 44 566776653 47899999999999999999999999999999


Q ss_pred             eccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHh
Q 009109          413 VTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAF  492 (543)
Q Consensus       413 ~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~  492 (543)
                      ++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++|
T Consensus       387 ~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~gl~~~  464 (474)
T d1wnda_         387 TPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDY  464 (474)
T ss_dssp             EEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTT
T ss_pred             EEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCC--ccCCCCcccccccccCccCHHHHHHHc
Confidence            999999999999999999999999999999999999999999999998865  467899999999999999999999999


Q ss_pred             hhceEEEEe
Q 009109          493 SHKKAVLYR  501 (543)
Q Consensus       493 ~~~k~v~~~  501 (543)
                      |+.|+|+++
T Consensus       465 t~~k~v~i~  473 (474)
T d1wnda_         465 TVVRHVMVK  473 (474)
T ss_dssp             EEEEEEEEE
T ss_pred             CCEEEEEEe
Confidence            999999886

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7e-98  Score=801.44  Aligned_cols=478  Identities=21%  Similarity=0.325  Sum_probs=437.8

Q ss_pred             hhhhhhcccccccceeeecceecccCCcccccccccCccccccC-CchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCC
Q 009109            8 AFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCS-ATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTK   86 (543)
Q Consensus         8 ~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p-~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~   86 (543)
                      ++.++....+-..++|||| +|+.+.  .++.++        +| .||++++.+ +.++.+|+++||++|++||+.|+++
T Consensus        26 ~~~~~~~~~~~~~~l~I~G-~~v~s~--~~~~~~--------nP~~tge~i~~~-~~a~~~dv~~Av~aA~~A~~~W~~~   93 (516)
T d1uzba_          26 ALRRVREEFGRHYPLYIGG-EWVDTK--ERMVSL--------NPSAPSEVVGTT-AKAGKAEAEAALEAAWKAFKTWKDW   93 (516)
T ss_dssp             HHHHHHHTTTEEECEEETT-EEECCS--SEEEEE--------ETTEEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHhcCCCCCeEEcC-EEECCC--CCeEEe--------CCCCCCeEEEEE-cCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            4555555556667999999 999863  357777        55 579999655 9999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCcccccCcCCCCcceEE
Q 009109           87 SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEII  166 (543)
Q Consensus        87 ~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (543)
                      |.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++.....+.......  ....+...+++
T Consensus        94 s~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~  170 (516)
T d1uzba_          94 PQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEV--VPYPGEDNESF  170 (516)
T ss_dssp             CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCC--CCCTTEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccch-hHHHHHHHHHHHHHHHHhhhhccccc--ccccccceeEE
Confidence            9999999999999999999999999999999999999975 99999999999999887764432211  11234566788


Q ss_pred             eecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecC-ChHHHHHHHhC
Q 009109          167 SEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQ  244 (543)
Q Consensus       167 ~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g-~~~~~~~L~~~  244 (543)
                      ++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++.+++.++ +|+|++|+|+| +.+.++.|++|
T Consensus       171 ~~P~Gvv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~h  250 (516)
T d1uzba_         171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEH  250 (516)
T ss_dssp             EEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTC
T ss_pred             eeccCccccccccccccccccccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999999999999999999 99999999999 67899999999


Q ss_pred             C-CCEEEEeCChHHHHHHHHHHh------cccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEE
Q 009109          245 K-WDKILYTGSPRVGRIVMAAAA------KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII  317 (543)
Q Consensus       245 ~-v~~v~ftGS~~~g~~i~~~a~------~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~  317 (543)
                      + |++|.||||+++|+.|++.++      .++||+++|||||||+||++|||++.|++.+++++| .|+||.|++++|+|
T Consensus       251 p~v~~I~FTGs~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~-~~~GQ~C~a~~ri~  329 (516)
T d1uzba_         251 PRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAY-GFQGQKCSAASRLI  329 (516)
T ss_dssp             TTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEE
T ss_pred             CCcCEEecccchhHHHHHHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhc-ccCCCcccccCccc
Confidence            6 999999999999999999887      678999999999999999999999999999999999 99999999999999


Q ss_pred             EeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECccc-CCCCceeeceEeeCCCC
Q 009109          318 TTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQR-DEKQLKIAPTILLDVPD  396 (543)
Q Consensus       318 V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~-~~~g~~~~Ptvl~~~~~  396 (543)
                      ||++++|+|++++.++++++++|+..+.+++||++++.+++++.++++++++.+.+++||.. +..|+|++|||+.++++
T Consensus       330 v~~~i~d~~~~~~~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~g~~~~~~g~~~~Ptvl~~v~~  409 (516)
T d1uzba_         330 LTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPP  409 (516)
T ss_dssp             EEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCT
T ss_pred             cccccccchhhHHHHHHHhcccCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEECCCcCCCCCceECCEEEecCCC
Confidence            99999999999999999999999665678999999999999999999999887777777765 45799999999999999


Q ss_pred             CCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCC
Q 009109          397 DSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVG  476 (543)
Q Consensus       397 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~  476 (543)
                      ++++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+++++...+.+||||+|
T Consensus       410 ~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k  489 (516)
T d1uzba_         410 KARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFK  489 (516)
T ss_dssp             TSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSG
T ss_pred             CchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999998877777899999999


Q ss_pred             CCCCCCcch-HHHHHHhhhceEEEEe
Q 009109          477 ESGMGSYHG-KFSFDAFSHKKAVLYR  501 (543)
Q Consensus       477 ~SG~G~~~g-~~~~~~~~~~k~v~~~  501 (543)
                      .||+|+++| .+++++||+.|+|..+
T Consensus       490 ~SG~G~~~G~~~~l~~~~~~k~v~~r  515 (516)
T d1uzba_         490 LSGTNAKTGALDYLRLFLEMKAVAER  515 (516)
T ss_dssp             GGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred             cccCCcccchHHHHHHhCCeeeEEEc
Confidence            999999876 7899999999999864

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.9e-91  Score=733.98  Aligned_cols=441  Identities=45%  Similarity=0.795  Sum_probs=407.3

Q ss_pred             HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcC
Q 009109           69 AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTK  148 (543)
Q Consensus        69 v~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~  148 (543)
                      |++||++||+||++|+.+|.++|.++|++++++|++++++|++++++|+||+..++..+|+..+++.++++++.+.+|..
T Consensus         2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~   81 (446)
T d1ad3a_           2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE   81 (446)
T ss_dssp             HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            78999999999999999999999999999999999999999999999999999999877999999999999999998877


Q ss_pred             CCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhhcCCCce
Q 009109          149 PEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAV  228 (543)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~alP~gvv  228 (543)
                      ++.........+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++.++++++++.+|++++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~~~~~~~  161 (446)
T d1ad3a_          82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLY  161 (446)
T ss_dssp             CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHSCTTTE
T ss_pred             ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccccccccc
Confidence            65444333344556788999999999999999999999999999999999999999999999999999999888999999


Q ss_pred             EeecCChHHHHHHHhCCCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCC
Q 009109          229 RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQ  308 (543)
Q Consensus       229 ~vv~g~~~~~~~L~~~~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq  308 (543)
                      +++.|+......+..+++|.|.||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++| .|+||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~-~~~GQ  240 (446)
T d1ad3a_         162 LVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQ  240 (446)
T ss_dssp             EECCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH-TTTTC
T ss_pred             ccccccchhhhhhcccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh-cCCCC
Confidence            99999777666666667999999999999999999999999999999999999999999999999999999999 99999


Q ss_pred             ccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCC-CCCcccccCCHHHHHHHHHHHHhhhcCCEEEECcccCCCCceee
Q 009109          309 ACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIA  387 (543)
Q Consensus       309 ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~-~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~g~~~~  387 (543)
                      .|++++|||||++++|+|+++|.+.++.+. |++. ..+++||++++.+.+++..+++++    +...|+..+..+.|+.
T Consensus       241 ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~-g~~~~~~~~~gp~i~~~~~~~~~~~~~~a----~~~~g~~~~~~~~~~~  315 (446)
T d1ad3a_         241 TCVAPDYILCDPSIQNQIVEKLKKSLKDFY-GEDAKQSRDYGRIINDRHFQRVKGLIDNQ----KVAHGGTWDQSSRYIA  315 (446)
T ss_dssp             CTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTSCCCSCHHHHHHHHHTTTTS----CEEECCCEETTTTEEC
T ss_pred             ccccCCccccccchhHHHHHhhhhhhheee-cccccccccccchhhhhhhhhhhccccch----hcccceeecCCCCCcC
Confidence            999999999999999999999999998885 5554 478999999999999998887643    4555555566788999


Q ss_pred             ceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCC
Q 009109          388 PTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTV  467 (543)
Q Consensus       388 Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~  467 (543)
                      |||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++++...
T Consensus       316 Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~  395 (446)
T d1ad3a_         316 PTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITV  395 (446)
T ss_dssp             CEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGC
T ss_pred             CEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998877778


Q ss_pred             CCCCcccCCCCCCCCcchHHHHHHhhhceEEEEecCCC--CCCCcCCCCC
Q 009109          468 SSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRSFNG--DSTTRYPPYT  515 (543)
Q Consensus       468 ~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~~~~~~~--~~~~~~~p~~  515 (543)
                      +.+||||+|.||+|+++|.+|+++||+.|+|+++++..  +.+++||||.
T Consensus       396 ~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~pp~~  445 (446)
T d1ad3a_         396 PTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKSLLNEEAHKARYPPSP  445 (446)
T ss_dssp             TTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEECCCCCCCTTGGGSSSCC
T ss_pred             CCCCccccccceeccchHHHHHHHHhceeEEEEccCCCCccccccCCCCC
Confidence            89999999999999999999999999999999987654  4568999985

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=100.00  E-value=5.9e-91  Score=745.49  Aligned_cols=473  Identities=22%  Similarity=0.354  Sum_probs=425.2

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhh-hhcCCCHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN-SRKTKSYEWRMSQIQSI   98 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~-~w~~~~~~~R~~iL~~~   98 (543)
                      .++|||| +|+.  +|++++++        ||.||++++++ +.++.+|+++|+++|++|++ .|+++|..+|+++|+++
T Consensus        17 ~~~~I~G-~~~~--sg~~~~v~--------~P~t~~~i~~v-~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~   84 (499)
T d1ky8a_          17 YPSYLAG-EWGG--SGQEIEVK--------SPIDLATIAKV-ISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKA   84 (499)
T ss_dssp             ECEECSS-SEEC--CSCEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHH
T ss_pred             CCCEECC-eECC--CCCeEEee--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHH
Confidence            6899999 9985  56778877        88899999766 99999999999999988887 79999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCccc-ccCcCCCCcceEEeecceEEEEEc
Q 009109           99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAK-TSLTTYPSSAEIISEPLGVVLVIS  177 (543)
Q Consensus        99 a~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~  177 (543)
                      +++|++++++|++++++|+|||..++.. |+..+++.+++++..++++....... ......+...+++++|+|||++|+
T Consensus        85 a~~l~~~~~~la~~~~~etGk~~~~a~~-Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~  163 (499)
T d1ky8a_          85 ADIIERNLDVFAEVLVMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAIT  163 (499)
T ss_dssp             HHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEEC
T ss_pred             HHHHHHhHHHHHHHHHHHhCCCHHHHhh-hhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccc
Confidence            9999999999999999999999999974 99999999999988877654322111 111123346788999999999999


Q ss_pred             CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCCh
Q 009109          178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSP  255 (543)
Q Consensus       178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~  255 (543)
                      |||||+.++++++++||++||+||+|||+.+|.++..+++++.++ +|.++++++.++.+.+..|+.|+ ++.+.||||.
T Consensus       164 p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~  243 (499)
T d1ky8a_         164 PFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGST  243 (499)
T ss_dssp             CSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCH
T ss_pred             cccccchhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCChHHHHHHhhccceeEEEeeccc
Confidence            999999999999999999999999999999999999999999999 99999999999888899999996 9999999999


Q ss_pred             HHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHH
Q 009109          256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK  335 (543)
Q Consensus       256 ~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~  335 (543)
                      ..++.+++.++  .+|+++|+||+||+||++|||++.|++.+++++| +|+||.|++++++|||++++|+|+++|+++++
T Consensus       244 ~~g~~i~~~~~--~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~  320 (499)
T d1ky8a_         244 EVGERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLS  320 (499)
T ss_dssp             HHHHHHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred             ccceEEeeccc--ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhh-ccCcccccccccccccchhHHHHHHHHHHHHH
Confidence            99999998775  5899999999999999999999999999999999 99999999999999999999999999999999


Q ss_pred             hhcCCCCCC-CCcccccCCHHHHHHHHHHHHhhhc-CCEEEECcccCCCCceeeceE---eeCCCCCCccccccccccee
Q 009109          336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTI---LLDVPDDSTIMKEEIFGPLL  410 (543)
Q Consensus       336 ~l~~g~~~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~v~~gg~~~~~g~~~~Ptv---l~~~~~~~~~~~~E~fgPvl  410 (543)
                      ++++|+|.+ ++++||++++.+++++++++++++. +++++.||...... +..+++   ..++++||++++||+||||+
T Consensus       321 ~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~eE~FGPvl  399 (499)
T d1ky8a_         321 SLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT-YVQPTLVEAPADRVKDMVLYKREVFAPVA  399 (499)
T ss_dssp             TCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEETT-EECCEEEECCHHHHTTSHHHHSCCCSSEE
T ss_pred             hCccCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccccc-ccccccccccccCCCCChhhhccccCceE
Confidence            999999986 6799999999999999999999875 57999988764333 333333   33456799999999999999


Q ss_pred             eeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHH
Q 009109          411 PIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFD  490 (543)
Q Consensus       411 ~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~  490 (543)
                      +|++|+|.+||++++|+++|||++||||+|.+.++++++++++|+|+||+++.+ ..+.+||||+|.||+|++||.+|++
T Consensus       400 ~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~  478 (499)
T d1ky8a_         400 SAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRH-GIGYYPFGGRKKSGVFREGIGYAVE  478 (499)
T ss_dssp             EEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCC-TTSSSCBCCEETTEESCBSTTTTHH
T ss_pred             EEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCC-CCCCCCccccccCcCCCCCHHHHHH
Confidence            999999999999999999999999999999999999999999999999998875 4688999999999999999999999


Q ss_pred             HhhhceEEEEecCCCCCCCcC
Q 009109          491 AFSHKKAVLYRSFNGDSTTRY  511 (543)
Q Consensus       491 ~~~~~k~v~~~~~~~~~~~~~  511 (543)
                      +||+.|+|+++. .....++|
T Consensus       479 ~~~~~k~i~~~~-~~~~~~~y  498 (499)
T d1ky8a_         479 AVTAYKTIVFNY-KGKGVWKY  498 (499)
T ss_dssp             HHEEEEEEEEEC-TTSSSCSC
T ss_pred             HhhCEEEEEEcC-CCCCCCCC
Confidence            999999999864 33445565

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=100.00  E-value=4.2e-88  Score=720.85  Aligned_cols=463  Identities=22%  Similarity=0.356  Sum_probs=421.3

Q ss_pred             cceeeecceecccCCcccccccccCccccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 009109           20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA   99 (543)
Q Consensus        20 ~~~~I~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a   99 (543)
                      .|+|||| +|+.+  +.+++++        ||.||+.++.+ +.++.+|+++|+++|++|++.|+++|.++|.++|++++
T Consensus         4 ~~n~I~G-~~~~~--~~~~~v~--------~P~tg~~i~~~-~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a   71 (474)
T d1euha_           4 YKNYVNG-EWKLS--ENEIKIY--------EPASGAELGSV-PAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVA   71 (474)
T ss_dssp             CCEEETT-EEECC--SSEEEEE--------CTTTCCEEEEE-ECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred             ccceecC-eecCC--CCCEEEe--------CCCCCCEEEEE-eCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHH
Confidence            4899999 99875  3466666        88899999766 99999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHhhhcCCCccc--ccCcCCCCcceEEeecceEEEEEc
Q 009109          100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAK--TSLTTYPSSAEIISEPLGVVLVIS  177 (543)
Q Consensus       100 ~~l~~~~~ela~~~~~etGk~~~ea~~~Ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~GVv~~i~  177 (543)
                      ++|++++++|++++++|+||+..++.. |+...+..++++..............  ......+...+++++|+|||++|+
T Consensus        72 ~~L~~~~~~la~~~~~e~Gk~~~~a~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~  150 (474)
T d1euha_          72 DILMRDKEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAIS  150 (474)
T ss_dssp             HHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEEC
T ss_pred             HHHHHhHHHHHHHHHHHhCCCcchhcc-ccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEec
Confidence            999999999999999999999999975 99999999999888766543221111  111223445678999999999999


Q ss_pred             CCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCceEeecCC-hHHHHHHHhCC-CCEEEEeCC
Q 009109          178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGS  254 (543)
Q Consensus       178 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a-lP~gvv~vv~g~-~~~~~~L~~~~-v~~v~ftGS  254 (543)
                      |||||+...+.++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+|+ .++++.|+.|+ |+.|.||||
T Consensus       151 p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs  230 (474)
T d1euha_         151 PFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGS  230 (474)
T ss_dssp             CTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred             cccccchhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCc
Confidence            999999999999999999999999999999999999999999998 999999999995 77899999996 999999999


Q ss_pred             hHHHHHHHHHHhcccCcEEEecCCCCcEEEcCCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHH
Q 009109          255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL  334 (543)
Q Consensus       255 ~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~  334 (543)
                      .++++.+.+.++  ++|+++|+||+||+||++|||++.|++.+++++| +|+||.|+++++||||++++++|++.++++.
T Consensus       231 ~~~~~~i~~~a~--~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~-~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~  307 (474)
T d1euha_         231 TGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKV  307 (474)
T ss_dssp             HHHHHHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHH
T ss_pred             cccccchhhhcc--cceEEEecCCcceEEEECCCchhhHHHHHHHHHh-hCCCCccccccccchhhhhhhhhhHhhhhhh
Confidence            999999998865  6899999999999999999999999999999999 9999999999999999999999999999999


Q ss_pred             HhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcC-CEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeee
Q 009109          335 KEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVS-DKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV  413 (543)
Q Consensus       335 ~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~-~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~  413 (543)
                      ..++.+++.+..+++|++.....+++.+.+...... +..+.++  ...|+|++|||+..++++|++++||+||||++|+
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~  385 (474)
T d1euha_         308 LALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEI--KREGNLICPILFDKVTTDMRLAWEEPFGPVLPII  385 (474)
T ss_dssp             HTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCC--CEETTEECCEEEESCCTTSGGGTSCCCSSEEEEE
T ss_pred             hhccccCcccccccccccchHHHHHHHHHHHhhhcccccccccC--CCCCCCcCCEEEecCCCcchhhhcccCCcEEEEE
Confidence            999999988878899999999999999999877653 4544333  3368999999999999999999999999999999


Q ss_pred             ccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccceeEEECCCcccCCCCCCCcccCCCCCCCCcchHHHHHHhh
Q 009109          414 TVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGMGSYHGKFSFDAFS  493 (543)
Q Consensus       414 ~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~  493 (543)
                      +|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|++|+++||
T Consensus       386 ~~~~~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~  464 (474)
T d1euha_         386 RVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQR-GTDNFPFLGAKKSGAGIQGVKYSIEAMT  464 (474)
T ss_dssp             EESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCC-CSTTSCBCCEETTEESCBSHHHHHHHTE
T ss_pred             EeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCC-CCCCCCccccccCccCccCHHHHHHHhC
Confidence            999999999999999999999999999999999999999999999998764 5788999999999999999999999999


Q ss_pred             hceEEEEe
Q 009109          494 HKKAVLYR  501 (543)
Q Consensus       494 ~~k~v~~~  501 (543)
                      +.|+|+++
T Consensus       465 ~~k~v~~~  472 (474)
T d1euha_         465 TVKSVVFD  472 (474)
T ss_dssp             EEEEEEEE
T ss_pred             cEEEEEEe
Confidence            99999875

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=100.00  E-value=5.8e-79  Score=651.39  Aligned_cols=438  Identities=18%  Similarity=0.222  Sum_probs=366.6

Q ss_pred             ccccCCchhhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhH
Q 009109           47 SCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI  126 (543)
Q Consensus        47 ~~~~p~tg~~~~~~~~~a~~~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~  126 (543)
                      .+.||.|||.|+..+|.++.+|+++||++|++||++|++++.++|.++|++++++|++++++|++++++|+|||..++. 
T Consensus         6 ~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~~a~-   84 (504)
T d1ez0a_           6 YATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-   84 (504)
T ss_dssp             EEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-
T ss_pred             EEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-
Confidence            3349999999976679999999999999999999999999999999999999999999999999999999999999997 


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCccc-----ccCcCCCCcceEEeecceEEEEEcCCchhhhhhh--hHHHHHhhcCCE
Q 009109          127 SEISMTKSSCKLALKELKYWTKPEKAK-----TSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSL--DPVIGAIAAGNA  199 (543)
Q Consensus       127 ~Ev~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~--~~~~~ALaaGN~  199 (543)
                      .|+..+++.++|+++.++++...+...     ..........+.+++|+|||++|+|||||+...+  .++++||++||+
T Consensus        85 ~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN~  164 (504)
T d1ez0a_          85 GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCP  164 (504)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHHhcc
Confidence            499999999999999888765433221     1111223456788999999999999999997554  599999999999


Q ss_pred             EEEeCCCCChHHHHHHHHHH----hhh-cCCCceEeecC-ChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcE
Q 009109          200 VVLKPSEIAPATSSLLAKLL----EDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPV  272 (543)
Q Consensus       200 VVlKps~~~p~~~~~l~~~l----~~a-lP~gvv~vv~g-~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~  272 (543)
                      ||+|||+.+|.++.++.+++    .++ +|+|++|+|+| +.+.++.|++|+ |++|+||||+.+|+.|.+.++++++|+
T Consensus       165 VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~~~~  244 (504)
T d1ez0a_         165 VIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPI  244 (504)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCC
T ss_pred             ceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhcccccc
Confidence            99999999999987776554    456 89999999999 678899999996 999999999999999999999998875


Q ss_pred             --EEecCCCCcEEEcCCCCHHHHH--HHHHHhhcccCCCCccccCCEEEEeCCcHH-HHHHHHHHHHHhhcCCCCCCCCc
Q 009109          273 --ILELGGKSPAVVDSTINLQVTT--RRIIAGKWMANNGQACIGVDYIITTKDFAP-KLIDSLRNELKEFFGKNPMESKD  347 (543)
Q Consensus       273 --~lelgG~~p~iV~~daDl~~aa--~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~-~f~~~l~~~~~~l~~g~~~~~~~  347 (543)
                        ++|+|||||+||++|||++.|+  ..++.++| .|+||.|++++|+||+++.++ .|++.+++.++..   +|  .+.
T Consensus       245 ~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~-~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~~---~~--~~~  318 (504)
T d1ez0a_         245 PFYGELGAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ---SP--STL  318 (504)
T ss_dssp             CEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC---CC--BCC
T ss_pred             cccccccccccccccccccHHHHhhhhccccchh-hccCccccccccccchhhhhHHHHhhhhhhhhhhc---cc--ccc
Confidence              4599999999999999999875  47899999 999999999999999888664 5777776665532   22  567


Q ss_pred             ccccCCHHHHHHHHHHHHhhhcC-CEEEECcccCCCCceeeceEee---CCCCCCcccccccccceeeeeccCCHHHHHH
Q 009109          348 LSRIVNPFHFARLASLLDEDKVS-DKIVYGGQRDEKQLKIAPTILL---DVPDDSTIMKEEIFGPLLPIVTVEKIEDSFD  423 (543)
Q Consensus       348 ~gpli~~~~~~~~~~~i~~a~~~-~~v~~gg~~~~~g~~~~Ptvl~---~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~  423 (543)
                      +||++++.+.+++   ++.+... ..+..||..   +.+..|+++.   ++..++++++||+||||++|++|+|++|||+
T Consensus       319 ~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~  392 (504)
T d1ez0a_         319 LTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE---SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLS  392 (504)
T ss_dssp             SSHHHHHHHHHHH---HHHHTSTTEEEEECCCC---TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHH
T ss_pred             cccchhhhhhhhh---hhhhhhhhhhccccccc---ccccCCccccccccccccchhhcccccCCeeeeeecCCHHHHHH
Confidence            9999998887776   4444443 466666643   3344444443   3445788999999999999999999999999


Q ss_pred             HHHcCCCCcEEEEecC--CHHHHHHHHhhcc--ceeEEECCCccc-----CCCCCCCcccCCCCCCCCcchHHHHHHhhh
Q 009109          424 VIKSKPKPLAAYFFSD--DEQMKKEFVQNIS--AGGIVFNDTIVH-----TTVSSLPFGGVGESGMGSYHGKFSFDAFSH  494 (543)
Q Consensus       424 ~~n~~~~gl~a~i~t~--d~~~~~~~~~~l~--~G~v~iN~~~~~-----~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~  494 (543)
                      ++|+++|||++||||+  |..++.+++++++  +|+|+||+++++     ...++.||||.+.||.|+ .|.+++++|++
T Consensus       393 ~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~~-~G~~~i~~f~r  471 (504)
T d1ez0a_         393 LSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS-VGAEAIHRWLR  471 (504)
T ss_dssp             HHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCS-SSGGGGGGGEE
T ss_pred             HHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCCc-chHHHHHHHhc
Confidence            9999999999999996  5568899999987  899999997543     234457999999999665 68999999987


Q ss_pred             ceEE
Q 009109          495 KKAV  498 (543)
Q Consensus       495 ~k~v  498 (543)
                      +.++
T Consensus       472 ~v~~  475 (504)
T d1ez0a_         472 PVAY  475 (504)
T ss_dssp             EEEE
T ss_pred             hhhh
Confidence            6543

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.1e-64  Score=524.85  Aligned_cols=384  Identities=16%  Similarity=0.232  Sum_probs=300.6

Q ss_pred             HHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcchhhHHH------------HHHHHH
Q 009109           67 EKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE------------ISMTKS  134 (543)
Q Consensus        67 ~dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~etGk~~~ea~~~E------------v~~~~~  134 (543)
                      +|+++++++|++||++|+++|+.+|.++|++++++|++|+++|++++++|+||+..++.. |            +..+++
T Consensus         1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~-e~~~~rl~~~~~~i~~~~~   79 (414)
T d1o20a_           1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK-ESLVDRLALNDKRIDEMIK   79 (414)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCC-HHHHHHHCCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhcccc-HHHHHHHhccHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999999999999877643 4            333344


Q ss_pred             HHHHHHHHHhhhcCCCcccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHH
Q 009109          135 SCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL  214 (543)
Q Consensus       135 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~  214 (543)
                      .+++++...    .................+.++|+|+++++.|||||+.++++++++||++||+||+|||+.+|.++.+
T Consensus        80 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~  155 (414)
T d1o20a_          80 ACETVIGLK----DPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKA  155 (414)
T ss_dssp             HHHHHHHSC----CCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred             HHHHHHHhh----hhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccch
Confidence            444333211    1111111112233456788999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhh-cCCCc----eEeecC-ChHHHHHHHhC-C-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCC-cEEEc
Q 009109          215 LAKLLEDY-VDNSA----VRVVEG-AVAETSALLEQ-K-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKS-PAVVD  285 (543)
Q Consensus       215 l~~~l~~a-lP~gv----v~vv~g-~~~~~~~L~~~-~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~-p~iV~  285 (543)
                      +++++.++ .|.++    ++.+.+ ..+....++.+ . +..++++|    +..+.+.++++.+++++|+||+| ++||+
T Consensus       156 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~a~~~~~~~~le~gGgn~~viv~  231 (414)
T d1o20a_         156 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRG----GYGLISFVRDNATVPVLETGVGNCHIFVD  231 (414)
T ss_dssp             HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECS----CHHHHHHHHHHCSSCBCCCCCCCEEEEEC
T ss_pred             hhhHHHhhhhhccccccccccccccchhhhhhcccccccCeEEEccc----HHHHHHHhhhccccceecccCCCCCeecc
Confidence            99999887 55554    555554 44556666654 3 44444444    56667777777888888888766 57889


Q ss_pred             CCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009109          286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD  365 (543)
Q Consensus       286 ~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~  365 (543)
                      +|||++.|++.++.++| .| ||.|++++|+|||+++||+|+++|.+...+..++++.         .+..    .    
T Consensus       232 ~dAd~~~A~~~~~~~~~-~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~---------~~~~----~----  292 (414)
T d1o20a_         232 ESADLKKAVPVIINAKT-QR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRG---------CEKT----R----  292 (414)
T ss_dssp             TTSCHHHHHHHHHHHHH-SC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEE---------CHHH----H----
T ss_pred             cccchhhhhhHHHhhhh-cC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCcccc---------chhh----h----
Confidence            99999999999999988 66 9999999999999999999999999988876544321         1110    0    


Q ss_pred             hhhcCCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHH
Q 009109          366 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKK  445 (543)
Q Consensus       366 ~a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~  445 (543)
                                         .+.+.+...   ....+++|+||||++|++|+|+||||+++|+++|||++||||+|.++++
T Consensus       293 -------------------~~~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~  350 (414)
T d1o20a_         293 -------------------EIVPDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAK  350 (414)
T ss_dssp             -------------------HHSTTSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHH
T ss_pred             -------------------hhcccceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHH
Confidence                               111111111   2245789999999999999999999999999999999999999999999


Q ss_pred             HHHhhccceeEEECCCcccCCCCCCCcccCCCCCC--CCcc--hHHHHHHhhhceEEEEec
Q 009109          446 EFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESGM--GSYH--GKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       446 ~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG~--G~~~--g~~~~~~~~~~k~v~~~~  502 (543)
                      ++++++++|.|+||+++.+.  ...|||+.+.||+  |+.|  |++|+++||+.|+|.++.
T Consensus       351 ~~~~~i~~G~V~IN~~~~~~--~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~  409 (414)
T d1o20a_         351 KFVSEIDAAAVYVNASTRFT--DGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE  409 (414)
T ss_dssp             HHHHHCCSSEEEESSCGGGC--STTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred             HHHHhCCeeEEEEeCCCcCC--CCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEECC
Confidence            99999999999999987643  3445555555554  4544  899999999999998765

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.8e-53  Score=439.77  Aligned_cols=400  Identities=17%  Similarity=0.191  Sum_probs=272.2

Q ss_pred             HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH------cCCCcchhhHHHHHHH-HHHHHHHH
Q 009109           68 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKD------LSKPPFETFISEISMT-KSSCKLAL  140 (543)
Q Consensus        68 dv~~av~aA~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e------tGk~~~ea~~~Ev~~~-~~~l~~~~  140 (543)
                      +++++++.|++|++.|+.+|.++|.++|+++++.|++++++|+++..+|      .|.+  ++..+.+... ...++.++
T Consensus         4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~--~~~idRL~l~~~~ri~~~~   81 (436)
T d1vlua_           4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLA--DSLLKRLDLFKGDKFEVML   81 (436)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCC--HHHHHHHCTTSTTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCc--HHHHHHHhcCchHHHHHHH
Confidence            4678899999999999999999999999999999999999999865444      4443  3221111000 01122222


Q ss_pred             HHHhhh---cCCC--cccccCcCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHhhcCCEEEEeCCCCChHHHHHH
Q 009109          141 KELKYW---TKPE--KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLL  215 (543)
Q Consensus       141 ~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l  215 (543)
                      ..++.+   .++.  .........+...+..+.|+||+++| ||++| ..++.+.++||++||+||+||++.++.++..+
T Consensus        82 ~~l~~i~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l  159 (436)
T d1vlua_          82 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREM  159 (436)
T ss_dssp             HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred             HHHHHHHhccccceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHH
Confidence            222222   1111  00111112334567788999999988 66777 67778899999999999999999999999888


Q ss_pred             HHHHh--------hh-cCCCceEeecCChHHHHHHHhCC-CCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCcEEEc
Q 009109          216 AKLLE--------DY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD  285 (543)
Q Consensus       216 ~~~l~--------~a-lP~gvv~vv~g~~~~~~~L~~~~-v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~  285 (543)
                      .++++        ++ +|++++++++++.+.++.|..|+ ||+|+||||...++.+.+.+.   +|++.++||++|+||+
T Consensus       160 ~~~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---~pvi~~~~G~~~~~Vd  236 (436)
T d1vlua_         160 AKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGICSIYLD  236 (436)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---SCBTTBCSCCEEEEEC
T ss_pred             HHHHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecCCceeeeeecccc---ceEEEecCCccceeec
Confidence            87764        45 89999999998878888888886 999999999998888766543   6999999999999999


Q ss_pred             CCCCHHHHHHHHHHhhcccCCCCccccCCEEEEeCCcHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009109          286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD  365 (543)
Q Consensus       286 ~daDl~~aa~~iv~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~  365 (543)
                      +|||++.|++.++.++| .+.|| |++.++++||+++++.|...+....+.-.        .+.  .++.........+.
T Consensus       237 ~~ADl~~A~~~i~~ak~-~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~gv--------~l~--~~~~~~~~~~~~~~  304 (436)
T d1vlua_         237 EDADLIKAKRISLDAKT-NYPAG-CNAMETLLINPKFSKWWEVLENLTLEGGV--------TIH--ATKDLKTAYFDKLN  304 (436)
T ss_dssp             TTCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTSTTHHHHHHHHHHHHCC--------CBE--ECHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHhc-cCCCc-cccccceeecHhhhhhhhhhHHHHHhCCc--------EEE--eCHHHHHHhhhhhh
Confidence            99999999999999999 88886 88999999999999888655544433311        000  01111111111111


Q ss_pred             hhhcCCEEEECcccCCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHH
Q 009109          366 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKK  445 (543)
Q Consensus       366 ~a~~~~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~  445 (543)
                      .   .++        ..+....|++....+   ..+.+|.|+|+++|++++|+||||+++|++++|||++|||+|.+.++
T Consensus       305 ~---~~~--------~~~~~~~~~~~~~~~---~d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~  370 (436)
T d1vlua_         305 E---LGK--------LTEAIQCKTVDADEE---QDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAE  370 (436)
T ss_dssp             H---HTC--------CCHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHH
T ss_pred             h---ccc--------ccccccccccCCCcc---cchhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHH
Confidence            1   010        011222333332222   23689999999999999999999999999999999999999999999


Q ss_pred             HHHhhccceeEEECCCcccCCCCCCCcccCCCCC--CCCc--chHHHHHHhhhceEEEEec
Q 009109          446 EFVQNISAGGIVFNDTIVHTTVSSLPFGGVGESG--MGSY--HGKFSFDAFSHKKAVLYRS  502 (543)
Q Consensus       446 ~~~~~l~~G~v~iN~~~~~~~~~~~pfGG~~~SG--~G~~--~g~~~~~~~~~~k~v~~~~  502 (543)
                      +|.+++++|.|+||+++.+.  .+.+||--.+-|  +++.  .|+.|++.+|..|++....
T Consensus       371 ~F~~~vda~~V~vNasTrf~--Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~  429 (436)
T d1vlua_         371 KFMKGVDSSGVYWNASTRFA--DGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGD  429 (436)
T ss_dssp             HHHHHCCCSEEEESSCGGGC--C----------------------CCSGGGEEEEEEEECS
T ss_pred             HHHHhCCceEEEEcCCCccC--CCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECC
Confidence            99999999999999998753  344454222223  3555  5889999999999987653

>d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: L-histidinol dehydrogenase HisD
domain: L-histidinol dehydrogenase HisD
species: Escherichia coli [TaxId: 562]

Probab=97.14  E-value=0.13  Score=49.91  Aligned_cols=327  Identities=17%  Similarity=0.187  Sum_probs=179.3

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHcC-C---CcchhhHHHHHHH--------HHHHHHHHHHHhhhcCCCccccc-
Q 009109           89 EWRMSQIQSIANMIEEKEEEIIEAIHKDLS-K---PPFETFISEISMT--------KSSCKLALKELKYWTKPEKAKTS-  155 (543)
Q Consensus        89 ~~R~~iL~~~a~~l~~~~~ela~~~~~etG-k---~~~ea~~~Ev~~~--------~~~l~~~~~~~~~~~~~~~~~~~-  155 (543)
                      ++-.+..+++-+.++++-|+-..-.++... .   .+.-+. .|+..+        .+.++.++++++.+-..+..... 
T Consensus        27 ~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~-~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~~~~  105 (431)
T d1k75a_          27 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSA-EEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVD  105 (431)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCH-HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCH-HHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCCCce
Confidence            334445566666666676665555555543 2   111121 244333        34455556666655544432211 


Q ss_pred             C-cCCCCcceEEeecceEEEEEcCCc---hhhhhhhhHHHHHhhcCCEE--EEeCCCCChHHHHHHHHHHhhhcCCCceE
Q 009109          156 L-TTYPSSAEIISEPLGVVLVISTWN---YPFLLSLDPVIGAIAAGNAV--VLKPSEIAPATSSLLAKLLEDYVDNSAVR  229 (543)
Q Consensus       156 ~-~~~~~~~~~~~~P~GVv~~i~p~N---~P~~~~~~~~~~ALaaGN~V--VlKps~~~p~~~~~l~~~l~~alP~gvv~  229 (543)
                      . ...+.....++.|+--|++..|.-   ||-. .+..++||-.+|..=  +.-|+...|.+ ...+.+      .|+=.
T Consensus       106 ~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSs-vLM~aiPAkvAGV~~Ivv~tPp~~~~~~-l~aa~~------~Gv~~  177 (431)
T d1k75a_         106 VETQPGVRCQQVTRPVASVGLYIPGGSAPLFST-VLMLATPASIAGCKKVVLCSPPPIADEI-LYAAQL------CGVQD  177 (431)
T ss_dssp             EEEETTEEEEEEEEECSEEEEECCCSSSCCHHH-HHHHHHHHHHHTCSEEEEEECSSCCHHH-HHHHHH------TTCCE
T ss_pred             eeccCCceeeeeeeehhhheeeccCCCccchHH-HHHHHHHHHhcCCCceeEEeCCCCcchH-HHHHHH------cCccc
Confidence            1 123445667889999999999965   6654 455678999999764  44565544432 111111      23323


Q ss_pred             eec-CChHHHHHHHh---C--CCCEEEEeCChHHHHHHHHHHhcccCcEEEecCCCCc--EEEcCCCCHHHHHHHHHHhh
Q 009109          230 VVE-GAVAETSALLE---Q--KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP--AVVDSTINLQVTTRRIIAGK  301 (543)
Q Consensus       230 vv~-g~~~~~~~L~~---~--~v~~v~ftGS~~~g~~i~~~a~~~~~~~~lelgG~~p--~iV~~daDl~~aa~~iv~~~  301 (543)
                      +.. |+.....+|.-   .  +||.|+=.|+.-+..+=..-......--+=-+.|.+=  +|-++++|.+.++..++.-+
T Consensus       178 iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQA  257 (431)
T d1k75a_         178 VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQA  257 (431)
T ss_dssp             EEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHH
T ss_pred             eEecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCCccccccccCCceEEEEecCCCCHHHHHHHHHhcc
Confidence            332 45555566652   2  3999999997655433222222111111112345553  33367799999999998877


Q ss_pred             cccCCCCccccCCEEEEeCC--cHHHHHHHHHHHHHhhcCCCCCCCCcccccCCHHHHHHHHHHHHhhhcCCEEEECccc
Q 009109          302 WMANNGQACIGVDYIITTKD--FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQR  379 (543)
Q Consensus       302 ~~~~~Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~v~~gg~~  379 (543)
                      = ....     .+.++|..+  ..+++.+.+.+.+..+.              ..   +...+.+               
T Consensus       258 E-H~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l~--------------r~---~i~~~s~---------------  299 (431)
T d1k75a_         258 E-HGPD-----SQVILLTPAADMARRVAEAVERQLAELP--------------RA---ETARQAL---------------  299 (431)
T ss_dssp             T-TCTT-----CEEEEEESCHHHHHHHHHHHHHHHHTCS--------------SC---HHHHHHH---------------
T ss_pred             C-Cccc-----ceeEEEeccHHHHHHHHHHHHHHhhhch--------------HH---HHHHhhh---------------
Confidence            5 3332     234566655  23444444444443321              00   0000000               


Q ss_pred             CCCCceeeceEeeCCCCCCcccccccccceeeeeccCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc-cceeEEE
Q 009109          380 DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVEKIEDSFDVIKSKPKPLAAYFFSDDEQMKKEFVQNI-SAGGIVF  458 (543)
Q Consensus       380 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~i~t~d~~~~~~~~~~l-~~G~v~i  458 (543)
                                              +-.|    ++.++|++||++++|..--- -..|.++|+.   ++..++ .+|.|++
T Consensus       300 ------------------------~~~~----ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~---~~~~~i~nAGsIfl  347 (431)
T d1k75a_         300 ------------------------NASR----LIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFL  347 (431)
T ss_dssp             ------------------------TTCE----EEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCCCSEEEE
T ss_pred             ------------------------ccce----EEEecCHHHHHHHHHhhhHH-HHHHHhcCHH---HHHhhhhhcchhhc
Confidence                                    0111    34568999999999985333 3778888875   455555 6899999


Q ss_pred             CCCccc-------CCCCCCCcccCCCCCCCCcchHHHHHHhhhceEEE
Q 009109          459 NDTIVH-------TTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVL  499 (543)
Q Consensus       459 N~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~v~  499 (543)
                      ..++.-       ..++-+|-||     ..|+.+..+...|....++.
T Consensus       348 G~~sp~a~GDY~aGpnHvLPT~G-----~Ar~~sgLsv~dF~k~~s~~  390 (431)
T d1k75a_         348 GDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTVQ  390 (431)
T ss_dssp             STTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCCCGGGGEEEEEEE
T ss_pred             CCCCcchhhccccCCCccCCCCC-----ceeecCCCCHHHeeeeeeEE
Confidence            876421       2344555554     46666667778888877765