Citrus Sinensis ID: 009121
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 543 | 2.2.26 [Sep-21-2011] | |||||||
| Q8VYW2 | 536 | Inactive beta-amylase 9 O | yes | no | 0.941 | 0.953 | 0.612 | 1e-175 | |
| Q9LIR6 | 575 | Beta-amylase 1, chloropla | no | no | 0.813 | 0.768 | 0.413 | 2e-94 | |
| O23553 | 548 | Beta-amylase 3, chloropla | no | no | 0.852 | 0.844 | 0.379 | 3e-93 | |
| Q9FM68 | 531 | Inactive beta-amylase 4, | no | no | 0.788 | 0.806 | 0.381 | 2e-86 | |
| O65258 | 542 | Beta-amylase 2, chloropla | no | no | 0.769 | 0.771 | 0.354 | 4e-76 | |
| P93594 | 503 | Beta-amylase OS=Triticum | N/A | no | 0.755 | 0.815 | 0.353 | 2e-73 | |
| P10537 | 499 | Beta-amylase OS=Ipomoea b | N/A | no | 0.810 | 0.881 | 0.335 | 3e-73 | |
| Q8L762 | 577 | Beta-amylase 6 OS=Arabido | no | no | 0.756 | 0.712 | 0.337 | 3e-73 | |
| P55005 | 488 | Beta-amylase OS=Zea mays | N/A | no | 0.790 | 0.879 | 0.338 | 6e-73 | |
| O64407 | 496 | Beta-amylase OS=Vigna ung | N/A | no | 0.775 | 0.848 | 0.343 | 4e-72 |
| >sp|Q8VYW2|BAM9_ARATH Inactive beta-amylase 9 OS=Arabidopsis thaliana GN=BAM9 PE=2 SV=1 | Back alignment and function desciption |
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Score = 614 bits (1583), Expect = e-175, Method: Compositional matrix adjust.
Identities = 326/532 (61%), Positives = 407/532 (76%), Gaps = 21/532 (3%)
Query: 1 MEVSLMGNSQANVVKTGLPYRDSRVCCSYKNKIDDKVLF---VNRVSFLGQNRSANLRKA 57
MEVS++GN QA + + L YR+ + V+ NRVSF N+S+ ++
Sbjct: 1 MEVSVIGNPQARICRAELAYRE------LGFRFGSDVISGESRNRVSFC--NQSSKWKEI 52
Query: 58 QLRFCTKASVQSQPLPSDRDSGPL--SSARPKSLDAVRLFVGLPLDTVSDANTVNHAKAI 115
+R C+ SV+ + + SD D+ P S+ + KSL++V+LFVGLPLDTVSD N VNH KAI
Sbjct: 53 AIR-CSSRSVKCEAIVSD-DASPFLKSTPKSKSLESVKLFVGLPLDTVSDCNNVNHLKAI 110
Query: 116 AAGLKALKLLGVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHAL 175
AGLKALKLLGVEG+ELP++WGV EKEA GKY WSGYLAVAE+V+K+GLKLH SL FH
Sbjct: 111 TAGLKALKLLGVEGIELPIFWGVVEKEAAGKYEWSGYLAVAEIVKKVGLKLHASLSFHGS 170
Query: 176 KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCES 235
KQ +I LPDWV++IG+++ I++TD+ GQQ+K CLS AVDD+PVLDGKTP++VY+ FCES
Sbjct: 171 KQTEIGLPDWVAKIGDAEPGIYFTDRYGQQYKDCLSFAVDDVPVLDGKTPMEVYRGFCES 230
Query: 236 FKSSFKPFMGTTITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQQH 295
FKS+F +MG TITGI++GLGPDGEL+YPSH ++K+ G GEFQC D++ML+ L+ +
Sbjct: 231 FKSAFADYMGNTITGITLGLGPDGELKYPSHQH---NAKLSGAGEFQCYDKHMLSALKGY 287
Query: 296 AEANGNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCL 355
AE+ GNPLWGL GPHDAP+YD+ PNS+SFF D GSWES YGDFFLSWYSS L SH + +
Sbjct: 288 AESTGNPLWGLGGPHDAPAYDQQPNSSSFFSDG-GSWESQYGDFFLSWYSSLLTSHADRV 346
Query: 356 LSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGLYNTAKRDGYAAVAEMFAKNSC 415
LS+ASS F GV + GK+PL+H W+K RSHPSELTAG Y++ +D Y A+AE+FAKNSC
Sbjct: 347 LSVASSAFSGIGVPLCGKLPLLHQWHKLRSHPSELTAGFYSSNGQDRYEAIAEIFAKNSC 406
Query: 416 KMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKN 475
+MI+PGMDLSDEHQ ES SSPESLL I+T+C K GV VSGQNSS T PGGFE++ +N
Sbjct: 407 RMIIPGMDLSDEHQSPESLSSPESLLGHIKTSCKKQGVVVSGQNSS-TPVPGGFERIVEN 465
Query: 476 LFGENV-VDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGDDLPVEEEV 526
L ENV +DLFTYQRMGA FFSPEHF +FT FVRNL+Q EL DD E EV
Sbjct: 466 LKDENVGIDLFTYQRMGALFFSPEHFHAFTVFVRNLSQFELSSDDQASEAEV 517
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LIR6|BAM1_ARATH Beta-amylase 1, chloroplastic OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1 | Back alignment and function description |
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| >sp|O23553|BAM3_ARATH Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=BAM3 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q9FM68|BAM4_ARATH Inactive beta-amylase 4, chloroplastic OS=Arabidopsis thaliana GN=BAM4 PE=2 SV=1 | Back alignment and function description |
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| >sp|O65258|BAM2_ARATH Beta-amylase 2, chloroplastic OS=Arabidopsis thaliana GN=BAM2 PE=1 SV=2 | Back alignment and function description |
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| >sp|P93594|AMYB_WHEAT Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P10537|AMYB_IPOBA Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4 | Back alignment and function description |
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| >sp|Q8L762|BAM6_ARATH Beta-amylase 6 OS=Arabidopsis thaliana GN=BAM6 PE=2 SV=1 | Back alignment and function description |
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| >sp|P55005|AMYB_MAIZE Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1 | Back alignment and function description |
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| >sp|O64407|AMYB_VIGUN Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 543 | ||||||
| 402171766 | 543 | beta-amylase 4 [Citrus trifoliata] | 1.0 | 1.0 | 0.985 | 0.0 | |
| 255551639 | 545 | Beta-amylase, putative [Ricinus communis | 0.987 | 0.983 | 0.679 | 0.0 | |
| 147782696 | 541 | hypothetical protein VITISV_030300 [Viti | 0.985 | 0.988 | 0.673 | 0.0 | |
| 225432390 | 541 | PREDICTED: inactive beta-amylase 9 [Viti | 0.985 | 0.988 | 0.672 | 0.0 | |
| 351726594 | 536 | inactive beta-amylase-like [Glycine max] | 0.977 | 0.990 | 0.669 | 0.0 | |
| 357447457 | 535 | Beta-amylase [Medicago truncatula] gi|35 | 0.981 | 0.996 | 0.664 | 0.0 | |
| 356549058 | 536 | PREDICTED: inactive beta-amylase 9-like | 0.977 | 0.990 | 0.660 | 0.0 | |
| 5031285 | 450 | beta-amylase [Prunus armeniaca] | 0.828 | 1.0 | 0.776 | 0.0 | |
| 224102619 | 437 | predicted protein [Populus trichocarpa] | 0.804 | 1.0 | 0.766 | 0.0 | |
| 449454466 | 532 | PREDICTED: inactive beta-amylase 9-like | 0.972 | 0.992 | 0.639 | 0.0 |
| >gi|402171766|gb|AFQ33616.1| beta-amylase 4 [Citrus trifoliata] | Back alignment and taxonomy information |
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Score = 1120 bits (2898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/543 (98%), Positives = 540/543 (99%)
Query: 1 MEVSLMGNSQANVVKTGLPYRDSRVCCSYKNKIDDKVLFVNRVSFLGQNRSANLRKAQLR 60
MEVSLMGNSQANVVKTGLPYRD RVCCSYKNKIDDKVLFVNRVSFLGQNRSANLRKAQLR
Sbjct: 1 MEVSLMGNSQANVVKTGLPYRDLRVCCSYKNKIDDKVLFVNRVSFLGQNRSANLRKAQLR 60
Query: 61 FCTKASVQSQPLPSDRDSGPLSSARPKSLDAVRLFVGLPLDTVSDANTVNHAKAIAAGLK 120
FCTKASVQSQPLPSDRDSGPLSSARPKSLDAVRLFVGLPLDTVSDANTVNHAKAIAAGLK
Sbjct: 61 FCTKASVQSQPLPSDRDSGPLSSARPKSLDAVRLFVGLPLDTVSDANTVNHAKAIAAGLK 120
Query: 121 ALKLLGVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHALKQPKI 180
ALKLLGVEG+ELPVWWGVAEKEAMGKYNWSGY+AVAEMVEKIGLKLHVSLCFHALKQP I
Sbjct: 121 ALKLLGVEGIELPVWWGVAEKEAMGKYNWSGYVAVAEMVEKIGLKLHVSLCFHALKQPTI 180
Query: 181 PLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSF 240
PLPDWVS+IGESQSSIFYTDQSGQQFKGCLS+AVDDLPVLDGKTPIQVYQEFCESFKSSF
Sbjct: 181 PLPDWVSRIGESQSSIFYTDQSGQQFKGCLSMAVDDLPVLDGKTPIQVYQEFCESFKSSF 240
Query: 241 KPFMGTTITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQQHAEANG 300
KPFMGTTITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQQHAEANG
Sbjct: 241 KPFMGTTITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQQHAEANG 300
Query: 301 NPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLAS 360
NPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLAS
Sbjct: 301 NPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLAS 360
Query: 361 STFGETGVSIYGKIPLIHSWYKTRSHPSELTAGLYNTAKRDGYAAVAEMFAKNSCKMILP 420
STFG+TGVSIYGKIPLIHSWYKTRSHPSELTAG YNTAKRDGYAAVAEMFAKNSCKMILP
Sbjct: 361 STFGKTGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILP 420
Query: 421 GMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGEN 480
GMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGEN
Sbjct: 421 GMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGEN 480
Query: 481 VVDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGDDLPVEEEVTESVHTNANTNIQV 540
VVDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGDDLPVEEEVTESVHTNANTNIQV
Sbjct: 481 VVDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGDDLPVEEEVTESVHTNANTNIQV 540
Query: 541 QAA 543
QAA
Sbjct: 541 QAA 543
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Source: Citrus trifoliata Species: Citrus trifoliata Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255551639|ref|XP_002516865.1| Beta-amylase, putative [Ricinus communis] gi|223543953|gb|EEF45479.1| Beta-amylase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|147782696|emb|CAN66037.1| hypothetical protein VITISV_030300 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225432390|ref|XP_002276777.1| PREDICTED: inactive beta-amylase 9 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|351726594|ref|NP_001236364.1| inactive beta-amylase-like [Glycine max] gi|59668410|emb|CAI39245.1| beta-amylase [Glycine max] | Back alignment and taxonomy information |
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| >gi|357447457|ref|XP_003594004.1| Beta-amylase [Medicago truncatula] gi|355483052|gb|AES64255.1| Beta-amylase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356549058|ref|XP_003542915.1| PREDICTED: inactive beta-amylase 9-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|5031285|gb|AAD38148.1|AF139501_1 beta-amylase [Prunus armeniaca] | Back alignment and taxonomy information |
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| >gi|224102619|ref|XP_002312750.1| predicted protein [Populus trichocarpa] gi|222852570|gb|EEE90117.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449454466|ref|XP_004144975.1| PREDICTED: inactive beta-amylase 9-like [Cucumis sativus] gi|449470888|ref|XP_004153140.1| PREDICTED: inactive beta-amylase 9-like [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 543 | ||||||
| TAIR|locus:2180029 | 536 | BMY3 "beta-amylase 3" [Arabido | 0.965 | 0.977 | 0.588 | 1.1e-165 | |
| TAIR|locus:2076086 | 575 | BAM1 "beta-amylase 1" [Arabido | 0.810 | 0.765 | 0.397 | 2.1e-84 | |
| TAIR|locus:2130504 | 548 | CT-BMY "chloroplast beta-amyla | 0.821 | 0.813 | 0.390 | 5.6e-84 | |
| TAIR|locus:2162152 | 531 | BAM4 "beta-amylase 4" [Arabido | 0.788 | 0.806 | 0.370 | 8.1e-76 | |
| TAIR|locus:2127033 | 542 | BAM2 "beta-amylase 2" [Arabido | 0.771 | 0.773 | 0.348 | 2.6e-70 | |
| TAIR|locus:2062535 | 577 | BAM6 "beta-amylase 6" [Arabido | 0.767 | 0.722 | 0.330 | 4.4e-68 | |
| TAIR|locus:2129810 | 498 | BAM5 "beta-amylase 5" [Arabido | 0.823 | 0.897 | 0.316 | 3.2e-65 | |
| TAIR|locus:2158455 | 689 | BMY2 "beta-amylase 2" [Arabido | 0.697 | 0.550 | 0.371 | 1.4e-64 | |
| TAIR|locus:2050720 | 691 | BAM7 "beta-amylase 7" [Arabido | 0.764 | 0.600 | 0.327 | 1.1e-62 |
| TAIR|locus:2180029 BMY3 "beta-amylase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1612 (572.5 bits), Expect = 1.1e-165, P = 1.1e-165
Identities = 318/540 (58%), Positives = 397/540 (73%)
Query: 1 MEVSLMGNSQANVVKTGLPYRDSRVCCSYKNKIDDKVLFVNRVSFLGQNRSANLRKAQLR 60
MEVS++GN QA + + L YR+ + I + NRVSF N+S+ ++ +R
Sbjct: 1 MEVSVIGNPQARICRAELAYRELGFRFG-SDVISGESR--NRVSFC--NQSSKWKEIAIR 55
Query: 61 FCTKASVQSQPLPSDRDSGPLSSARPKS--LDAVRLFVGLPLDTVSDANTVNHXXXXXXX 118
C+ SV+ + + SD D+ P + PKS L++V+LFVGLPLDTVSD N VNH
Sbjct: 56 -CSSRSVKCEAIVSD-DASPFLKSTPKSKSLESVKLFVGLPLDTVSDCNNVNHLKAITAG 113
Query: 119 XXXXXXXXVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHALKQP 178
VEG+ELP++WGV EKEA GKY WSGYLAVAE+V+K+GLKLH SL FH KQ
Sbjct: 114 LKALKLLGVEGIELPIFWGVVEKEAAGKYEWSGYLAVAEIVKKVGLKLHASLSFHGSKQT 173
Query: 179 KIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKS 238
+I LPDWV++IG+++ I++TD+ GQQ+K CLS AVDD+PVLDGKTP++VY+ FCESFKS
Sbjct: 174 EIGLPDWVAKIGDAEPGIYFTDRYGQQYKDCLSFAVDDVPVLDGKTPMEVYRGFCESFKS 233
Query: 239 SFKPFMGTTITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQQHAEA 298
+F +MG TITGI++GLGPDGEL+YPSH AK S G GEFQC D++ML+ L+ +AE+
Sbjct: 234 AFADYMGNTITGITLGLGPDGELKYPSHQHNAKLS---GAGEFQCYDKHMLSALKGYAES 290
Query: 299 NGNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSL 358
GNPLWGL GPHDAP+YD+ PNS+SFF D GGSWES YGDFFLSWYSS L SH + +LS+
Sbjct: 291 TGNPLWGLGGPHDAPAYDQQPNSSSFFSD-GGSWESQYGDFFLSWYSSLLTSHADRVLSV 349
Query: 359 ASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGLYNTAKRDGYAAVAEMFAKNSCKMI 418
ASS F GV + GK+PL+H W+K RSHPSELTAG Y++ +D Y A+AE+FAKNSC+MI
Sbjct: 350 ASSAFSGIGVPLCGKLPLLHQWHKLRSHPSELTAGFYSSNGQDRYEAIAEIFAKNSCRMI 409
Query: 419 LPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFG 478
+PGMDLSDEHQ ES SSPESLL I+T+C K GV VSGQNSS T PGGFE++ +NL
Sbjct: 410 IPGMDLSDEHQSPESLSSPESLLGHIKTSCKKQGVVVSGQNSS-TPVPGGFERIVENLKD 468
Query: 479 ENV-VDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGDDLPVEEEV-TESVHTNANT 536
ENV +DLFTYQRMGA FFSPEHF +FT FVRNL+Q EL DD E EV E+ + T
Sbjct: 469 ENVGIDLFTYQRMGALFFSPEHFHAFTVFVRNLSQFELSSDDQASEAEVEAETASIGSGT 528
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| TAIR|locus:2076086 BAM1 "beta-amylase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2130504 CT-BMY "chloroplast beta-amylase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2162152 BAM4 "beta-amylase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2127033 BAM2 "beta-amylase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2062535 BAM6 "beta-amylase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2129810 BAM5 "beta-amylase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2158455 BMY2 "beta-amylase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2050720 BAM7 "beta-amylase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8VYW2 | BAM9_ARATH | No assigned EC number | 0.6127 | 0.9410 | 0.9533 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1 | 0.766 |
| 3rd Layer | 3.2.1.2 | 0.824 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00019825001 | SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (541 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 543 | |||
| PLN02803 | 548 | PLN02803, PLN02803, beta-amylase | 1e-129 | |
| PLN00197 | 573 | PLN00197, PLN00197, beta-amylase; Provisional | 1e-120 | |
| PLN02161 | 531 | PLN02161, PLN02161, beta-amylase | 1e-109 | |
| PLN02801 | 517 | PLN02801, PLN02801, beta-amylase | 2e-99 | |
| PLN02905 | 702 | PLN02905, PLN02905, beta-amylase | 8e-89 | |
| PLN02705 | 681 | PLN02705, PLN02705, beta-amylase | 3e-79 | |
| pfam01373 | 399 | pfam01373, Glyco_hydro_14, Glycosyl hydrolase fami | 2e-72 |
| >gnl|CDD|178400 PLN02803, PLN02803, beta-amylase | Back alignment and domain information |
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Score = 386 bits (994), Expect = e-129
Identities = 179/439 (40%), Positives = 252/439 (57%), Gaps = 8/439 (1%)
Query: 81 LSSARPKSLDAVRLFVGLPLDTVSDANTVNHAKAIAAGLKALKLLGVEGVELPVWWGVAE 140
LS K+ V +FV LPLDTV+ +N +A+ A L AL+ GVEGV + WWG+ E
Sbjct: 75 LSGPHSKNDSGVPVFVMLPLDTVTMGGNLNKPRAMNASLMALRSAGVEGVMVDAWWGLVE 134
Query: 141 KEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSS 195
K+ KYNW GY + +MV+K GLKL V + FH IPLP WV +
Sbjct: 135 KDGPMKYNWEGYAELVQMVQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEMSKNPD 194
Query: 196 IFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFMGTTITGISMGL 255
+ YTD+SG++ +SL D LPVL G+TPIQVY ++ SF+ FK ++G I I +G+
Sbjct: 195 LVYTDRSGRRNPEYISLGCDSLPVLRGRTPIQVYSDYMRSFRERFKDYLGGVIAEIQVGM 254
Query: 256 GPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQQHAEANGNPLWGLRGPHDAPSY 315
GP GELRYPS+ + + PG+GEFQC D+ M L+ AEA G WG GPHDA Y
Sbjct: 255 GPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMRASLEASAEAIGKKDWGRGGPHDAGEY 314
Query: 316 DESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIP 375
+ P FF+ + G+W + YG FFL WYS +L+ HG+ +L+ A F TG + GK+
Sbjct: 315 KQFPEETGFFRRD-GTWNTEYGQFFLEWYSGKLLEHGDRILAAAEGIFQGTGAKLSGKVA 373
Query: 376 LIHSWYKTRSHPSELTAGLYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFS 435
IH Y+TRSH +ELTAG YNT DGY +A MF+K+ + M++ D QP +
Sbjct: 374 GIHWHYRTRSHAAELTAGYYNTRNHDGYLPIARMFSKHGVVLNFTCMEMRDGEQPEHANC 433
Query: 436 SPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGE--NVVDLFTYQRMGAY 493
SPE L+ Q++ A G E++G+N+ F Q+ + N + FTY RM
Sbjct: 434 SPEGLVRQVKMATRTAGTELAGENALERYDSAAFAQVVATSRSDSGNGLTAFTYLRMNKR 493
Query: 494 FFSPEHFPSFTKFVRNLNQ 512
F +++ +FV+N+++
Sbjct: 494 LFEGDNWRQLVEFVKNMSE 512
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Length = 548 |
| >gnl|CDD|215099 PLN00197, PLN00197, beta-amylase; Provisional | Back alignment and domain information |
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| >gnl|CDD|177820 PLN02161, PLN02161, beta-amylase | Back alignment and domain information |
|---|
| >gnl|CDD|215431 PLN02801, PLN02801, beta-amylase | Back alignment and domain information |
|---|
| >gnl|CDD|178493 PLN02905, PLN02905, beta-amylase | Back alignment and domain information |
|---|
| >gnl|CDD|178307 PLN02705, PLN02705, beta-amylase | Back alignment and domain information |
|---|
| >gnl|CDD|216462 pfam01373, Glyco_hydro_14, Glycosyl hydrolase family 14 | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 543 | |||
| PLN00197 | 573 | beta-amylase; Provisional | 100.0 | |
| PLN02803 | 548 | beta-amylase | 100.0 | |
| PLN02801 | 517 | beta-amylase | 100.0 | |
| PLN02161 | 531 | beta-amylase | 100.0 | |
| PLN02905 | 702 | beta-amylase | 100.0 | |
| PLN02705 | 681 | beta-amylase | 100.0 | |
| PF01373 | 402 | Glyco_hydro_14: Glycosyl hydrolase family 14; Inte | 100.0 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 99.86 | |
| COG1874 | 673 | LacA Beta-galactosidase [Carbohydrate transport an | 99.56 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 98.76 | |
| PLN03059 | 840 | beta-galactosidase; Provisional | 98.23 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 98.03 | |
| PF00232 | 455 | Glyco_hydro_1: Glycosyl hydrolase family 1; InterP | 97.59 | |
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 97.58 | |
| PRK09852 | 474 | cryptic 6-phospho-beta-glucosidase; Provisional | 97.35 | |
| PRK15014 | 477 | 6-phospho-beta-glucosidase BglA; Provisional | 97.23 | |
| PRK13511 | 469 | 6-phospho-beta-galactosidase; Provisional | 97.22 | |
| KOG0496 | 649 | consensus Beta-galactosidase [Carbohydrate transpo | 97.16 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 97.05 | |
| PLN02849 | 503 | beta-glucosidase | 97.05 | |
| PLN02814 | 504 | beta-glucosidase | 97.01 | |
| TIGR01233 | 467 | lacG 6-phospho-beta-galactosidase. This enzyme is | 96.97 | |
| PRK09589 | 476 | celA 6-phospho-beta-glucosidase; Reviewed | 96.97 | |
| PLN02998 | 497 | beta-glucosidase | 96.93 | |
| PRK09593 | 478 | arb 6-phospho-beta-glucosidase; Reviewed | 96.68 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 96.5 | |
| COG2723 | 460 | BglB Beta-glucosidase/6-phospho-beta-glucosidase/b | 96.25 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 95.85 | |
| COG3693 | 345 | XynA Beta-1,4-xylanase [Carbohydrate transport and | 95.65 | |
| PF00331 | 320 | Glyco_hydro_10: Glycosyl hydrolase family 10; Inte | 94.56 | |
| PF01229 | 486 | Glyco_hydro_39: Glycosyl hydrolases family 39; Int | 94.46 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 93.93 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 89.66 | |
| KOG0626 | 524 | consensus Beta-glucosidase, lactase phlorizinhydro | 89.0 | |
| PRK11572 | 248 | copper homeostasis protein CutC; Provisional | 88.29 | |
| cd06592 | 303 | GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact | 85.72 | |
| TIGR01093 | 228 | aroD 3-dehydroquinate dehydratase, type I. Type II | 85.27 | |
| PF03659 | 386 | Glyco_hydro_71: Glycosyl hydrolase family 71 ; Int | 84.56 | |
| cd06593 | 308 | GH31_xylosidase_YicI YicI alpha-xylosidase is a gl | 84.46 | |
| cd00502 | 225 | DHQase_I Type I 3-dehydroquinase, (3-dehydroquinat | 84.26 | |
| PF00290 | 259 | Trp_syntA: Tryptophan synthase alpha chain; InterP | 84.08 | |
| PF03932 | 201 | CutC: CutC family; InterPro: IPR005627 Copper tran | 82.51 | |
| cd04724 | 242 | Tryptophan_synthase_alpha Ttryptophan synthase (TR | 81.46 | |
| PRK02412 | 253 | aroD 3-dehydroquinate dehydratase; Provisional | 81.17 | |
| COG2730 | 407 | BglC Endoglucanase [Carbohydrate transport and met | 81.12 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 80.44 |
| >PLN00197 beta-amylase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-186 Score=1471.13 Aligned_cols=458 Identities=40% Similarity=0.709 Sum_probs=437.5
Q ss_pred CCCCCCCCCCceEEEeeeceeeeCCCccCcHHHHHHHHHHHHHcCcceEEeeeeeeccccCCCceeechhHHHHHHHHHH
Q 009121 82 SSARPKSLDAVRLFVGLPLDTVSDANTVNHAKAIAAGLKALKLLGVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEK 161 (543)
Q Consensus 82 ~~~~~~~~~~vpv~VMlPLd~V~~~~~~~~~~~~~~~L~~LK~~GVdGV~vdVWWGiVE~~~p~~YdWs~Y~~l~~mv~~ 161 (543)
...+++..++||||||||||+|+++|+|+++++|+++|++||++||||||||||||+||+++|++|||++|++||+|||+
T Consensus 96 ~~~~~~~~~~vpvyVMLPLd~V~~~~~l~~~~~l~~~L~~LK~~GVdGVmvDvWWGiVE~~~p~~YdWsgY~~L~~mvr~ 175 (573)
T PLN00197 96 IGGTKEKGKGVPVYVMMPLDSVTMGNTVNRRKAMKASLQALKSAGVEGIMMDVWWGLVERESPGVYNWGGYNELLEMAKR 175 (573)
T ss_pred cccccccCCCeeEEEEeecceeccCCcccCHHHHHHHHHHHHHcCCCEEEEeeeeeeeccCCCCcCCcHHHHHHHHHHHH
Confidence 44566788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEEEEee-----cCCCCCCCCChhchhhhccCCCeeeecCCCCccccccccccCCcccCCCCChhHHHHHHHHHH
Q 009121 162 IGLKLHVSLCFH-----ALKQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESF 236 (543)
Q Consensus 162 ~GLKv~~vmsFH-----vgD~~~IpLP~WV~~~g~~~PDI~ytDr~G~rn~E~LSl~~D~~pvl~GRTpiq~Y~dfm~sF 236 (543)
+||||||||||| |||+|+||||+||++++++|||||||||+|+||+||||||||++|||+||||+|+|+|||+||
T Consensus 176 ~GLKlq~VmSFHqCGGNVGD~~~IpLP~WV~~~g~~dpDifftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~DFM~SF 255 (573)
T PLN00197 176 HGLKVQAVMSFHQCGGNVGDSCTIPLPKWVVEEVDKDPDLAYTDQWGRRNYEYVSLGCDTLPVLKGRTPVQCYADFMRAF 255 (573)
T ss_pred cCCeEEEEEEecccCCCCCCcccccCCHHHHHhhccCCCceeecCCCCcccceeccccccccccCCCCHHHHHHHHHHHH
Confidence 999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccCceeEEEeeccCCccCCCCCCCCCCCCCcCCCCcccccccHHHHHHHHHHHHHcCCCCcCCCCCCCCCCCC
Q 009121 237 KSSFKPFMGTTITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQQHAEANGNPLWGLRGPHDAPSYD 316 (543)
Q Consensus 237 ~~~f~~~l~~~I~eI~VGlGP~GELRYPSyp~~~g~W~~PGiGEFQCYDky~~~~lr~~a~~~gn~~WG~~gP~~ag~Yn 316 (543)
|++|++||+++|+||+|||||||||||||||+..|+|+||||||||||||||+++||++|+++|||+||++||+|+|+||
T Consensus 256 r~~F~~~l~~~I~eI~VGlGP~GELRYPSYp~~~g~w~fPGiGEFQCYDkyml~~L~~aA~~~G~p~WG~~gP~dAg~Yn 335 (573)
T PLN00197 256 RDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYMLSSLKAAAEAAGKPEWGSTGPTDAGHYN 335 (573)
T ss_pred HHHHHHHhcCceeEEEeccCcCccccCCCCcCcCCCcCCCCccceeechHHHHHHHHHHHHHhCCHhhcCCCCCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEecceeecCCCCCChhhhcccccC
Q 009121 317 ESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGLYN 396 (543)
Q Consensus 317 ~~P~~t~FF~~~gg~~~s~YGrFFL~WYs~~L~~HgdrIL~~A~~~F~~~~v~l~aKV~GIHWwy~t~SHaAElTAGyYN 396 (543)
+.|++|+||++++|+|+|+||||||+|||++|++||||||++|+.+|++++|+|++|||||||||+|+||||||||||||
T Consensus 336 ~~P~~t~FF~~~gG~w~S~YG~FFL~WYS~~Ll~HGDrVL~~A~~~F~g~~v~l~aKVaGIHWwY~t~SHAAELTAGyYN 415 (573)
T PLN00197 336 NWPEDTRFFKKEGGGWNSPYGEFFLSWYSQMLLDHGERILSSAKSIFENTGVKISVKIAGIHWHYGTRSHAPELTAGYYN 415 (573)
T ss_pred CCCCCCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeccceeecCCCCchHhhcccccc
Confidence 99999999997778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHHHhhCCcEEEEeecccCCCCCCCCCCCChHHHHHHHHHHHHhcCCeeeccccccCCCcchHHHHHHhc
Q 009121 397 TAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNL 476 (543)
Q Consensus 397 t~~rdGY~~Ia~mf~rh~~~l~FTClEM~d~e~p~~~~s~Pe~Lv~QV~~aa~~~Gv~~~GENAL~~~d~~~~~qi~~~~ 476 (543)
|++||||+||++|||||+|+|+||||||+|.+||++++|+||+||+||+++|+++||+|+|||||++||.++|+||+++.
T Consensus 416 t~~rDGY~~Ia~mfarh~~~l~FTClEM~D~eqp~~a~s~PE~Lv~QV~~aA~~~Gv~vaGENAL~r~D~~~~~qI~~~~ 495 (573)
T PLN00197 416 TRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVRQVALATREAEVPLAGENALPRYDDYAHEQILQAS 495 (573)
T ss_pred CCCcccHHHHHHHHHHcCCeEEEEecCcccCCCCccccCCHHHHHHHHHHHHHHcCCcEeeeccccccChhHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred cC-------CCCcceeEEeecCcccCCCCChhhHHHHHHHhccCCCCCCCCCCcccc-hhccccccCCccee
Q 009121 477 FG-------ENVVDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGDDLPVEEEV-TESVHTNANTNIQV 540 (543)
Q Consensus 477 ~~-------~~~~~~FTylRm~~~lf~~~n~~~F~~FV~~m~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 540 (543)
.. ..++++||||||++.||+++||++|++|||+||++... +++|+++++ .+.+.......+|.
T Consensus 496 ~~~~~~~~~~~~l~~FTYlRm~~~lf~~~n~~~F~~FVr~M~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e 566 (573)
T PLN00197 496 SLNIDGNSEDREMCAFTYLRMNPHLFQPDNWRRFVAFVKKMKEGKDS-HRCREQVEREAEHFVHVTRPLVQE 566 (573)
T ss_pred ccccCCCcccCceeeEEEeCCChHHcChhhHHHHHHHHHHhcCCCCC-CccchhcchhcccceecchhhHHH
Confidence 42 13589999999999999999999999999999998775 899988655 44444444444443
|
|
| >PLN02803 beta-amylase | Back alignment and domain information |
|---|
| >PLN02801 beta-amylase | Back alignment and domain information |
|---|
| >PLN02161 beta-amylase | Back alignment and domain information |
|---|
| >PLN02905 beta-amylase | Back alignment and domain information |
|---|
| >PLN02705 beta-amylase | Back alignment and domain information |
|---|
| >PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PLN03059 beta-galactosidase; Provisional | Back alignment and domain information |
|---|
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
| >PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional | Back alignment and domain information |
|---|
| >PRK15014 6-phospho-beta-glucosidase BglA; Provisional | Back alignment and domain information |
|---|
| >PRK13511 6-phospho-beta-galactosidase; Provisional | Back alignment and domain information |
|---|
| >KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
| >PLN02849 beta-glucosidase | Back alignment and domain information |
|---|
| >PLN02814 beta-glucosidase | Back alignment and domain information |
|---|
| >TIGR01233 lacG 6-phospho-beta-galactosidase | Back alignment and domain information |
|---|
| >PRK09589 celA 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
| >PLN02998 beta-glucosidase | Back alignment and domain information |
|---|
| >PRK09593 arb 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
| >COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
| >COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
| >KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK11572 copper homeostasis protein CutC; Provisional | Back alignment and domain information |
|---|
| >cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase | Back alignment and domain information |
|---|
| >TIGR01093 aroD 3-dehydroquinate dehydratase, type I | Back alignment and domain information |
|---|
| >PF03659 Glyco_hydro_71: Glycosyl hydrolase family 71 ; InterPro: IPR005197 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose | Back alignment and domain information |
|---|
| >cd00502 DHQase_I Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase | Back alignment and domain information |
|---|
| >PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4 | Back alignment and domain information |
|---|
| >PF03932 CutC: CutC family; InterPro: IPR005627 Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF | Back alignment and domain information |
|---|
| >cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA) | Back alignment and domain information |
|---|
| >PRK02412 aroD 3-dehydroquinate dehydratase; Provisional | Back alignment and domain information |
|---|
| >COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 543 | ||||
| 1fa2_A | 498 | Crystal Structure Of Beta-Amylase From Sweet Potato | 4e-71 | ||
| 1v3i_A | 495 | The Roles Of Glu186 And Glu380 In The Catalytic Rea | 3e-70 | ||
| 1q6g_A | 495 | Crystal Structure Of Soybean Beta-Amylase Mutant (N | 4e-70 | ||
| 1b1y_A | 500 | Sevenfold Mutant Of Barley Beta-Amylase Length = 50 | 6e-70 | ||
| 1q6d_A | 495 | Crystal Structure Of Soybean Beta-Amylase Mutant (M | 6e-70 | ||
| 1wds_A | 495 | The Role Of An Inner Loop In The Catalytic Mechanis | 8e-70 | ||
| 1q6c_A | 495 | Crystal Structure Of Soybean Beta-Amylase Complexed | 8e-70 | ||
| 1wdq_A | 495 | The Role Of An Inner Loop In The Catalytic Mechanis | 9e-70 | ||
| 1wdr_A | 495 | The Role Of An Inner Loop In The Catalytic Mechanis | 1e-69 | ||
| 1uko_A | 495 | Crystal Structure Of Soybean Beta-Amylase Mutant Su | 1e-69 | ||
| 1ukp_A | 495 | Crystal Structure Of Soybean Beta-Amylase Mutant Su | 1e-69 | ||
| 1q6e_A | 495 | Crystal Structure Of Soybean Beta-Amylase Mutant (E | 1e-69 | ||
| 1v3h_A | 495 | The Roles Of Glu186 And Glu380 In The Catalytic Rea | 2e-69 | ||
| 1bya_A | 495 | Crystal Structures Of Soybean Beta-Amylase Reacted | 1e-68 | ||
| 1btc_A | 491 | Three-Dimensional Structure Of Soybean Beta-Amylase | 1e-68 | ||
| 2xff_A | 535 | Crystal Structure Of Barley Beta-Amylase Complexed | 3e-68 | ||
| 2dqx_A | 495 | Mutant Beta-Amylase (W55r) From Soy Bean Length = 4 | 4e-68 | ||
| 3voc_A | 419 | Crystal Structure Of The Catalytic Domain Of Beta-a | 1e-23 | ||
| 1ven_A | 516 | Crystal Structure Analysis Of Y164eMALTOSE OF BACIL | 5e-18 | ||
| 1b90_A | 516 | Bacillus Cereus Beta-Amylase Apo Form Length = 516 | 7e-18 | ||
| 1veo_A | 516 | Crystal Structure Analysis Of Y164fMALTOSE OF BACIL | 9e-18 | ||
| 1vep_A | 516 | Crystal Structure Analysis Of Triple (T47mY164ET328 | 2e-17 | ||
| 1itc_A | 516 | Beta-amylase From Bacillus Cereus Var. Mycoides Com | 4e-17 |
| >pdb|1FA2|A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato Length = 498 | Back alignment and structure |
|
| >pdb|1V3I|A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase Length = 495 | Back alignment and structure |
| >pdb|1Q6G|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum Length = 495 | Back alignment and structure |
| >pdb|1B1Y|A Chain A, Sevenfold Mutant Of Barley Beta-Amylase Length = 500 | Back alignment and structure |
| >pdb|1Q6D|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum Length = 495 | Back alignment and structure |
| >pdb|1WDS|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase Length = 495 | Back alignment and structure |
| >pdb|1Q6C|A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose Length = 495 | Back alignment and structure |
| >pdb|1WDQ|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase Length = 495 | Back alignment and structure |
| >pdb|1WDR|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase Length = 495 | Back alignment and structure |
| >pdb|1UKO|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region Length = 495 | Back alignment and structure |
| >pdb|1UKP|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region Length = 495 | Back alignment and structure |
| >pdb|1Q6E|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (E178y) With Increased Ph Optimum At Ph 5.4 Length = 495 | Back alignment and structure |
| >pdb|1V3H|A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase Length = 495 | Back alignment and structure |
| >pdb|1BYA|A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis Length = 495 | Back alignment and structure |
| >pdb|1BTC|A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase Determined At 3.0 Angstroms Resolution: Preliminary Chain Tracing Of The Complex With Alpha-Cyclodextrin Length = 491 | Back alignment and structure |
| >pdb|2XFF|A Chain A, Crystal Structure Of Barley Beta-Amylase Complexed With Acarbose Length = 535 | Back alignment and structure |
| >pdb|2DQX|A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean Length = 495 | Back alignment and structure |
| >pdb|3VOC|A Chain A, Crystal Structure Of The Catalytic Domain Of Beta-amylase From Paenibacillus Polymyxa Length = 419 | Back alignment and structure |
| >pdb|1VEN|A Chain A, Crystal Structure Analysis Of Y164eMALTOSE OF BACILUS Cereus Beta-Amylase At Ph 4.6 Length = 516 | Back alignment and structure |
| >pdb|1B90|A Chain A, Bacillus Cereus Beta-Amylase Apo Form Length = 516 | Back alignment and structure |
| >pdb|1VEO|A Chain A, Crystal Structure Analysis Of Y164fMALTOSE OF BACILLUS Cereus Beta-Amylase At Ph 4.6 Length = 516 | Back alignment and structure |
| >pdb|1VEP|A Chain A, Crystal Structure Analysis Of Triple (T47mY164ET328N) MALTOSE OF BACILLUS CEREUS BETA-Amylase At Ph 6.5 Length = 516 | Back alignment and structure |
| >pdb|1ITC|A Chain A, Beta-amylase From Bacillus Cereus Var. Mycoides Complexed With Maltopentaose Length = 516 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 Length = 498 | Back alignment and structure |
|---|
Score = 530 bits (1366), Expect = 0.0
Identities = 155/478 (32%), Positives = 252/478 (52%), Gaps = 24/478 (5%)
Query: 79 GPLSSARPKSLDAVRLFVGLPLDTVSDANTVNHAKAIAAGLKALKLLGVEGVELPVWWGV 138
P+ P + V L+V LPL V+ N + + LK +K G +GV + VWWG+
Sbjct: 1 APIPGVMPIG-NYVSLYVMLPLGVVNADNVFPDKEKVEDELKQVKAGGCDGVMVDVWWGI 59
Query: 139 AEKEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQ 193
E + +Y+WS Y + ++V+K GLK+ + FH IP+P W+ QIG+
Sbjct: 60 IEAKGPKQYDWSAYRELFQLVKKCGLKIQAIMSFHQCGGNVGDAVFIPIPQWILQIGDKN 119
Query: 194 SSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM-GTTITGIS 252
IFYT+++G + + LSL VD+ + G+T +++Y++F ESF+ + F+ I I
Sbjct: 120 PDIFYTNRAGNRNQEYLSLGVDNQRLFQGRTALEMYRDFMESFRDNMADFLKAGDIVDIE 179
Query: 253 MGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQQHAEANGNPLWGLRGPHDA 312
+G G GELRYPS+ + PG+GEFQC D+ M+ ++ + GN W A
Sbjct: 180 VGCGAAGELRYPSYPE-TQGWVFPGIGEFQCYDKYMVADWKEAVKQAGNADWE-MPGKGA 237
Query: 313 PSYDESPNSNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYG 372
+Y+++P+ FF+ NG +++ G FFL+WYS++LI HG+ +L A+ F V+I
Sbjct: 238 GTYNDTPDKTEFFRPNGT-YKTDMGKFFLTWYSNKLIIHGDQVLEEANKVFVGLRVNIAA 296
Query: 373 KIPLIHSWYKTRSHPSELTAGLYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRE 432
K+ IH WY SH +ELTAG YN A RDGY +A M A++ + +++ D QP E
Sbjct: 297 KVSGIHWWYNHVSHAAELTAGFYNVAGRDGYRPIARMLARHHATLNFTCLEMRDSEQPAE 356
Query: 433 SFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENV---------VD 483
+ S+P+ L+ Q+ ++ K ++V+G+N+ + QM L V +
Sbjct: 357 AKSAPQELVQQVLSSGWKEYIDVAGENALPRYDATAYNQMLLKLRPNGVNLNGPPKLKMS 416
Query: 484 LFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGDDLPVEEEVTESVHTNANTNIQVQ 541
TY R+ ++F F KFV+ +H D P ++ +V +N+ I +
Sbjct: 417 GLTYLRLSDDLLQTDNFELFKKFVKK-----MHADLDPSPNAISPAVLERSNSAITID 469
|
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* Length = 495 | Back alignment and structure |
|---|
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* Length = 535 | Back alignment and structure |
|---|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A Length = 516 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Length = 552 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 543 | |||
| 1wdp_A | 495 | Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 | 100.0 | |
| 1fa2_A | 498 | Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 | 100.0 | |
| 2xfr_A | 535 | Beta-amylase; hydrolase, carbohydrate metabolism, | 100.0 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 100.0 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 99.81 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 99.74 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 99.56 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 99.22 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 98.94 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 98.94 | |
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 98.8 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 98.73 | |
| 3apg_A | 473 | Beta-glucosidase; TIM barrel, hydrolase, sugar bin | 98.45 | |
| 3ahx_A | 453 | Beta-glucosidase A; cellulases, glycosyl hydrolase | 98.39 | |
| 3fj0_A | 465 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase | 98.37 | |
| 1qox_A | 449 | Beta-glucosidase; hydrolase, cellulose degradation | 98.36 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 98.35 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 98.33 | |
| 1e4i_A | 447 | Beta-glucosidase; hydrolase, family 1 glycosyl hyd | 98.28 | |
| 1qvb_A | 481 | Beta-glycosidase; TIM-barrel, thermostable, hydrol | 98.28 | |
| 2dga_A | 565 | Beta-glucosidase; alpha/beta barrel, hydrolase; 1. | 98.28 | |
| 1cbg_A | 490 | Cyanogenic beta-glucosidase; hydrolase (O-glycosyl | 98.24 | |
| 2j78_A | 468 | Beta-glucosidase A; family 1, hydrolase, inhibitor | 98.23 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 98.23 | |
| 2o9p_A | 454 | Beta-glucosidase B; family 1 glycoside hydrolase; | 98.23 | |
| 2e9l_A | 469 | Cytosolic beta-glucosidase; novel cytosolic neutra | 98.22 | |
| 1v08_A | 512 | Beta-glucosidase; glycoside hydrolase, dimboa-gluc | 98.22 | |
| 1v02_A | 565 | Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri | 98.21 | |
| 2jf7_A | 532 | Strictosidine-O-beta-D-glucosidase; alkaloid, hydr | 98.19 | |
| 1wcg_A | 464 | Thioglucosidase, myrosinase; aphid, beta-glucosida | 98.18 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 98.16 | |
| 2e3z_A | 465 | Beta-glucosidase; TIM barrel, glycoside hydrolase | 98.15 | |
| 3ahy_A | 473 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 98.15 | |
| 1e4m_M | 501 | Myrosinase MA1; hydrolase, family 1 glycosyl hydro | 98.15 | |
| 1ug6_A | 431 | Beta-glycosidase; glucosidase, atomic resolution, | 98.14 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 98.09 | |
| 1pbg_A | 468 | PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g | 98.08 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 98.06 | |
| 4b3l_A | 479 | Beta-glucosidase; hydrolase, glycosidase, carbohyd | 98.02 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 97.99 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 97.98 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 97.97 | |
| 1gnx_A | 479 | Beta-glucosidase; hydrolase, glycosyltransferase, | 97.96 | |
| 4hz8_A | 444 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba | 97.95 | |
| 3f5l_A | 481 | Beta-glucosidase; beta-alpha-barrels, glycosidase, | 97.94 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 97.92 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 97.88 | |
| 2xhy_A | 479 | BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, | 97.82 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 97.82 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 97.78 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 97.78 | |
| 3gnp_A | 488 | OS03G0212800 protein; beta-alpha barrel, glycosida | 97.78 | |
| 3ta9_A | 458 | Glycoside hydrolase family 1; TIM barrel, glucosid | 97.77 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 97.71 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 97.69 | |
| 4atd_A | 513 | Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr | 97.65 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 97.64 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 97.62 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 97.61 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 97.57 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 97.56 | |
| 3vii_A | 487 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 97.51 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 97.5 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 97.48 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 97.47 | |
| 3qom_A | 481 | 6-phospho-beta-glucosidase; structural genomics, P | 97.44 | |
| 1uhv_A | 500 | Beta-xylosidase; family 39 glycoside hydrolase, xy | 97.43 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 97.43 | |
| 3ptm_A | 505 | Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly | 97.37 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 97.36 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 97.35 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 97.34 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 97.32 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 97.31 | |
| 4dde_A | 480 | 6-phospho-beta-glucosidase; structural genomics, P | 97.3 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 97.2 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 97.2 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 97.16 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 97.13 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 97.11 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 96.98 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 96.95 | |
| 3ro8_A | 341 | Endo-1,4-beta-xylanase; glycosyl hydrolase family | 96.93 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 96.9 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 96.87 | |
| 4a3y_A | 540 | Raucaffricine-O-beta-D-glucosidase; hydrolase, alk | 96.77 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 96.73 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 96.64 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 96.59 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 96.4 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 96.39 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 96.34 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 96.3 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 96.09 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 95.99 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 95.96 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 95.85 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 95.58 | |
| 4ha4_A | 489 | Beta-galactosidase; TIM barrel, beta-glycosidase, | 95.39 | |
| 1uwi_A | 489 | Beta-galactosidase; hydrolase, beta-glycosidase, g | 95.36 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 95.11 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 95.05 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 94.58 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 94.4 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 94.2 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 94.03 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 93.65 | |
| 4h41_A | 340 | Putative alpha-L-fucosidase; hydrolase, carbohydra | 93.63 | |
| 1uas_A | 362 | Alpha-galactosidase; TIM-barrel, beta-alpha-barrel | 93.14 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 93.11 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 92.66 | |
| 2bdq_A | 224 | Copper homeostasis protein CUTC; alpha beta protei | 91.48 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 91.24 | |
| 2yfo_A | 720 | Alpha-galactosidase-sucrose kinase agask; hydrolas | 90.36 | |
| 3mi6_A | 745 | Alpha-galactosidase; NESG, structural genomics, PS | 88.83 | |
| 4acy_A | 382 | Endo-alpha-mannosidase; hydrolase, endomannosidase | 87.46 | |
| 1twd_A | 256 | Copper homeostasis protein CUTC; TIM-like protein, | 87.33 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 87.29 | |
| 2xn2_A | 732 | Alpha-galactosidase; hydrolase, glycosidase; HET: | 86.89 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 86.61 | |
| 4ad1_A | 380 | Glycosyl hydrolase family 71; glycoside hydrolase | 86.01 | |
| 2y2w_A | 574 | Arabinofuranosidase; hydrolase, arabinoxylan, glyc | 83.37 | |
| 3tva_A | 290 | Xylose isomerase domain protein TIM barrel; struct | 82.77 | |
| 4fnq_A | 729 | Alpha-galactosidase AGAB; glycoside hydrolase, hyd | 81.98 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 80.02 |
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-180 Score=1412.36 Aligned_cols=426 Identities=34% Similarity=0.661 Sum_probs=416.6
Q ss_pred CCCCCceEEEeeeceeeeCCCccCcHHHHHHHHHHHHHcCcceEEeeeeeeccccCCCceeechhHHHHHHHHHHcCCcE
Q 009121 87 KSLDAVRLFVGLPLDTVSDANTVNHAKAIAAGLKALKLLGVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKL 166 (543)
Q Consensus 87 ~~~~~vpv~VMlPLd~V~~~~~~~~~~~~~~~L~~LK~~GVdGV~vdVWWGiVE~~~p~~YdWs~Y~~l~~mv~~~GLKv 166 (543)
...++||||||||||+|+++|+|+++++++++|++||++||||||||||||+||+++|++|||++|++|++|||++||||
T Consensus 7 ~~~~~vpv~VMlPLd~V~~~~~~~~~~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~l~~mv~~~GLKl 86 (495)
T 1wdp_A 7 MLLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQECGLTL 86 (495)
T ss_dssp HHTTCCCEEEECCTTSBCTTSCBCCHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEE
T ss_pred ccCCCccEEEeeecceecCCCeeCCHHHHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeE
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEee-----cCCCCCCCCChhchhhhccCCCeeeecCCCCccccccccccCCcccCCCCChhHHHHHHHHHHHHhhc
Q 009121 167 HVSLCFH-----ALKQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFK 241 (543)
Q Consensus 167 ~~vmsFH-----vgD~~~IpLP~WV~~~g~~~PDI~ytDr~G~rn~E~LSl~~D~~pvl~GRTpiq~Y~dfm~sF~~~f~ 241 (543)
||||||| |||+|+||||+||++++++||||+||||+|+||+||||||||++|||+||||+|+|+|||+|||++|+
T Consensus 87 q~vmSFHqCGgNVGD~~~IPLP~WV~~~~~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~Dfm~SFr~~F~ 166 (495)
T 1wdp_A 87 QAIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMS 166 (495)
T ss_dssp EEEEECSCBCCSTTCSCCBCSCHHHHHHHHHCGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHHTH
T ss_pred EEEEEeeecCCCCCCcccccCCHHHHHhhccCCCcEEECCCCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCceeEEEeeccCCccCCCCCCCCCCCCCcCCCCcccccccHHHHHHHHHHHHHcCCCCcCCCCCCCCCCCCCCCC
Q 009121 242 PFM-GTTITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQQHAEANGNPLWGLRGPHDAPSYDESPN 320 (543)
Q Consensus 242 ~~l-~~~I~eI~VGlGP~GELRYPSyp~~~g~W~~PGiGEFQCYDky~~~~lr~~a~~~gn~~WG~~gP~~ag~Yn~~P~ 320 (543)
+|| +++|+||+|||||||||||||||+..| |+||||||||||||||+++||++|+++||++||+ |+|+++||++|+
T Consensus 167 ~~~~~~~I~eI~VGlGP~GELRYPSYp~~~g-W~fPGiGEFQCYDky~~~~Lk~aA~~~G~~~WG~--P~dag~yn~~P~ 243 (495)
T 1wdp_A 167 DFLESGLIIDIEVGLGPAGELRYPSYPQSQG-WEFPGIGEFQCYDKYLKADFKAAVARAGHPEWEL--PDDAGKYNDVPE 243 (495)
T ss_dssp HHHHTTCEEEEEECCSGGGBSSCCCSCGGGT-CCTTCCCCCCCCSHHHHHHHHHHHHHTTCTTCCS--CSSSCCTTCCGG
T ss_pred HhccCCeeEEEEeCccccccccCCCCccccC-CCCCCcceeeechHHHHHHHHHHHHHhCchhhCC--CCCCCccCCCCC
Confidence 999 889999999999999999999999999 9999999999999999999999999999999998 999999999999
Q ss_pred CCCcccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEecceeecCCCCCChhhhcccccCCCCC
Q 009121 321 SNSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGLYNTAKR 400 (543)
Q Consensus 321 ~t~FF~~~gg~~~s~YGrFFL~WYs~~L~~HgdrIL~~A~~~F~~~~v~l~aKV~GIHWwy~t~SHaAElTAGyYNt~~r 400 (543)
+|+||+++ |+|+|+||||||+|||++|++||||||++|+.+|++++|+|++|||||||||+|+|||||||||||||++|
T Consensus 244 ~t~FF~~~-G~w~s~YGkFFL~WYs~~Ll~HgdrvL~~A~~~F~~~~v~l~~KV~GIHWwY~t~SHaAELTAGyYNt~~r 322 (495)
T 1wdp_A 244 STGFFKSN-GTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDR 322 (495)
T ss_dssp GSTTTSTT-SGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEECCCCCTTTTSTTCHHHHHHTCCCBTTB
T ss_pred CCCCcCCC-CcccchhhhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeceeeeccCCCCChHHhhcccccCCCC
Confidence 99999997 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHhhCCcEEEEeecccCCCCCCCCCCCChHHHHHHHHHHHHhcCCeeeccccccCCCcchHHHHHHhccCC-
Q 009121 401 DGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGE- 479 (543)
Q Consensus 401 dGY~~Ia~mf~rh~~~l~FTClEM~d~e~p~~~~s~Pe~Lv~QV~~aa~~~Gv~~~GENAL~~~d~~~~~qi~~~~~~~- 479 (543)
|||+||++|||||+|+|+||||||+|.+||++++|+||+||+||+++|+++||+|+|||||+|||.++|+||++++..+
T Consensus 323 dGY~~Ia~m~~rh~~~l~fTC~EM~d~eq~~~~~s~Pe~Lv~QV~~aa~~~Gv~~aGENAL~~~d~~a~~qI~~~~~~~~ 402 (495)
T 1wdp_A 323 DGYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNARPQG 402 (495)
T ss_dssp CSSHHHHHHHHTTTCEEEECCTTCCGGGSCGGGCCCHHHHHHHHHHHHHHTTCCEEEECSSCCCSHHHHHHHHHHHSTTC
T ss_pred CchHHHHHHHHHcCCeEEEEecCCCcCCCCcccCCCHHHHHHHHHHHHHHhCCceeccccccccCHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999997543
Q ss_pred --------CCcceeEEeecCcccCCCCChhhHHHHHHHhccCCCC
Q 009121 480 --------NVVDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELH 516 (543)
Q Consensus 480 --------~~~~~FTylRm~~~lf~~~n~~~F~~FV~~m~~~~~~ 516 (543)
.++++||||||++.||+++||++|++|||+||++...
T Consensus 403 ~~~~~~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~m~~~~~~ 447 (495)
T 1wdp_A 403 VNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHADQDY 447 (495)
T ss_dssp CCTTSSCSSCCSEEEESCCCHHHHSHHHHHHHHHHHHHHTTTCCC
T ss_pred ccccCCccCceeeEEEecCChhhCCchhHHHHHHHHHHHhcCCCc
Confidence 2599999999999999999999999999999998764
|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 | Back alignment and structure |
|---|
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* | Back alignment and structure |
|---|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} | Back alignment and structure |
|---|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
| >3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} | Back alignment and structure |
|---|
| >3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} | Back alignment and structure |
|---|
| >1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
| >1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* | Back alignment and structure |
|---|
| >1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* | Back alignment and structure |
|---|
| >1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... | Back alignment and structure |
|---|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
| >2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* | Back alignment and structure |
|---|
| >2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* | Back alignment and structure |
|---|
| >1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A | Back alignment and structure |
|---|
| >1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* | Back alignment and structure |
|---|
| >2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A | Back alignment and structure |
|---|
| >1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
| >2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* | Back alignment and structure |
|---|
| >3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} | Back alignment and structure |
|---|
| >1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* | Back alignment and structure |
|---|
| >1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A | Back alignment and structure |
|---|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
| >1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* | Back alignment and structure |
|---|
| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
| >4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A | Back alignment and structure |
|---|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A | Back alignment and structure |
|---|
| >4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* | Back alignment and structure |
|---|
| >3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* | Back alignment and structure |
|---|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
| >2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
|---|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
| >3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* | Back alignment and structure |
|---|
| >3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} | Back alignment and structure |
|---|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
| >4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
| >3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* | Back alignment and structure |
|---|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A | Back alignment and structure |
|---|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A | Back alignment and structure |
|---|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
| >3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* | Back alignment and structure |
|---|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* | Back alignment and structure |
|---|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
| >3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A | Back alignment and structure |
|---|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
| >4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
| >4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A | Back alignment and structure |
|---|
| >1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A | Back alignment and structure |
|---|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
| >4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
| >2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae} | Back alignment and structure |
|---|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* | Back alignment and structure |
|---|
| >3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} | Back alignment and structure |
|---|
| >4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B | Back alignment and structure |
|---|
| >1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A | Back alignment and structure |
|---|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
| >2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* | Back alignment and structure |
|---|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
| >4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A* | Back alignment and structure |
|---|
| >2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} | Back alignment and structure |
|---|
| >3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus} | Back alignment and structure |
|---|
| >4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* | Back alignment and structure |
|---|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 543 | ||||
| d1b1ya_ | 500 | c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare | 0.0 | |
| d1fa2a_ | 498 | c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea b | 0.0 | |
| d1wdpa1 | 490 | c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine m | 0.0 | |
| d1vema2 | 417 | c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus | 1e-159 |
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 500 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Barley (Hordeum vulgare) [TaxId: 4513]
Score = 581 bits (1499), Expect = 0.0
Identities = 152/435 (34%), Positives = 233/435 (53%), Gaps = 19/435 (4%)
Query: 92 VRLFVGLPLDTVSDANTVNHAKAIAAGLKALKLLGVEGVELPVWWGVAEKEAMGKYNWSG 151
V+++V LPLD VS N + A L+ L GV+GV + VWWG+ E + Y+WS
Sbjct: 6 VQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSA 65
Query: 152 YLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQF 206
Y + E+V+K GLKL + FH IP+P WV +G IFYTD G +
Sbjct: 66 YKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVRDVGTRDPDIFYTDGHGTRN 125
Query: 207 KGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM-GTTITGISMGLGPDGELRYPS 265
L+L VD+ P+ G++ +Q+Y ++ SF+ + K F+ I I +GLGP GELRYPS
Sbjct: 126 IEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENMKDFLDAGVIVDIEVGLGPAGELRYPS 185
Query: 266 HHRLAKSSKIPGVGEFQCCDRNMLNLLQQHAEANGNPLWGLRGPHDAPSYDESPNSNSFF 325
+ + + PG+GEF C D+ + + A A G+P W P+DA Y+++P FF
Sbjct: 186 YPQ-SHGWSFPGIGEFICYDKYLQADFKAAAAAVGHPEWE--FPNDAGQYNDTPERTQFF 242
Query: 326 KDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRS 385
+DNG ++ S G FFL+WYS+ LI HG+ +L A+ F V + KI +H WYK S
Sbjct: 243 RDNG-TYLSEKGRFFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKIAGVHWWYKVPS 301
Query: 386 HPSELTAGLYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIR 445
H +ELTAG YN RDGY +A M ++ + ++ D QP ++ S+PE L+ Q+
Sbjct: 302 HAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQPPDAMSAPEELVQQVL 361
Query: 446 TACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENV---------VDLFTYQRMGAYFFS 496
+A + G+ VS +N+ P + + +N + + FTY R+
Sbjct: 362 SAGWREGLNVSCENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFGFTYLRLSNQLVE 421
Query: 497 PEHFPSFTKFVRNLN 511
+++ +F FV ++
Sbjct: 422 GQNYVNFKTFVDRMH 436
|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 498 | Back information, alignment and structure |
|---|
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} Length = 490 | Back information, alignment and structure |
|---|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} Length = 417 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 543 | |||
| d1wdpa1 | 490 | beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | 100.0 | |
| d1fa2a_ | 498 | beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI | 100.0 | |
| d1b1ya_ | 500 | beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 | 100.0 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 100.0 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 99.57 | |
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 98.99 | |
| d2j78a1 | 443 | Beta-glucosidase A {Thermotoga maritima [TaxId: 23 | 98.06 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 97.96 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 97.92 | |
| d1e4ia_ | 447 | Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 | 97.91 | |
| d1gnxa_ | 464 | Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] | 97.79 | |
| d1ug6a_ | 426 | Beta-glucosidase A {Thermus thermophilus [TaxId: 2 | 97.75 | |
| d1wcga1 | 462 | Thioglucosidase {Cabbage aphid (Brevicoryne brassi | 97.72 | |
| d1v02a_ | 484 | Plant beta-glucosidase (myrosinase) {Sorghum bicol | 97.72 | |
| d1cbga_ | 490 | Plant beta-glucosidase (myrosinase) {Creeping whit | 97.66 | |
| d1vffa1 | 423 | Beta-glucosidase A {Archaeon Pyrococcus horikoshii | 97.6 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 97.56 | |
| d1qoxa_ | 449 | Beta-glucosidase A {Bacillus circulans, subsp. alk | 97.56 | |
| d1pbga_ | 468 | 6-phospho-beta-D-galactosidase, PGAL {Lactococcus | 97.54 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 97.52 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 97.48 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 97.45 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 97.4 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 97.37 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 97.29 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 97.22 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 97.16 | |
| d1e4mm_ | 499 | Plant beta-glucosidase (myrosinase) {White mustard | 97.15 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 97.08 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 97.06 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 97.01 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 96.95 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 96.93 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 96.82 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 96.8 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 96.8 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 96.53 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 96.41 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 96.4 | |
| d1uwsa_ | 489 | beta-Glycosidase {Archaeon Sulfolobus solfataricus | 96.37 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 96.1 | |
| d1qvba_ | 481 | beta-Glycosidase {Archaeon Thermosphaera aggregans | 95.84 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 95.6 | |
| d1ta3b_ | 301 | Xylanase A, catalytic core {Emericella nidulans (A | 95.5 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 95.24 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 95.08 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 94.7 | |
| d1i1wa_ | 303 | Xylanase A, catalytic core {Thermoascus aurantiacu | 94.64 | |
| d1zy9a2 | 348 | Alpha-galactosidase GalA catalytic domain {Thermot | 92.54 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 91.5 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 89.14 | |
| d1twda_ | 247 | Copper homeostasis protein CutC {Shigella flexneri | 87.7 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 87.58 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 86.51 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 86.11 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 86.07 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 85.78 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 85.77 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 85.5 | |
| d1w32a_ | 346 | Xylanase A, catalytic core {Pseudomonas fluorescen | 85.27 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 84.81 | |
| d1gqna_ | 252 | Type I 3-dehydroquinate dehydratase {Salmonella ty | 84.05 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 82.49 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 82.38 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 82.12 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 81.42 |
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Soybean (Glycine max) [TaxId: 3847]
Probab=100.00 E-value=1.3e-183 Score=1431.48 Aligned_cols=445 Identities=33% Similarity=0.628 Sum_probs=429.8
Q ss_pred CCCCceEEEeeeceeeeCCCccCcHHHHHHHHHHHHHcCcceEEeeeeeeccccCCCceeechhHHHHHHHHHHcCCcEE
Q 009121 88 SLDAVRLFVGLPLDTVSDANTVNHAKAIAAGLKALKLLGVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKLH 167 (543)
Q Consensus 88 ~~~~vpv~VMlPLd~V~~~~~~~~~~~~~~~L~~LK~~GVdGV~vdVWWGiVE~~~p~~YdWs~Y~~l~~mv~~~GLKv~ 167 (543)
+.++||||||||||+|+++|+++++++++++|++||++||||||||||||+||+++|++|||++|++|++|||++|||||
T Consensus 3 ~~~yVpVyVMlPLd~V~~~~~~~~~~~l~~~L~~LK~~GVdGVmvDvWWGiVE~~~P~~YdWsgY~~l~~mvr~~GLKlq 82 (490)
T d1wdpa1 3 LLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQECGLTLQ 82 (490)
T ss_dssp HTTCCCEEEECCTTSBCTTSCBCCHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEE
T ss_pred ccccccEEEEeecceecCCCcccCHHHHHHHHHHHHHcCCcEEEEeeeeeEeecCCCCccChHHHHHHHHHHHHcCCeEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEee-----cCCCCCCCCChhchhhhccCCCeeeecCCCCccccccccccCCcccCCCCChhHHHHHHHHHHHHhhcc
Q 009121 168 VSLCFH-----ALKQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKP 242 (543)
Q Consensus 168 ~vmsFH-----vgD~~~IpLP~WV~~~g~~~PDI~ytDr~G~rn~E~LSl~~D~~pvl~GRTpiq~Y~dfm~sF~~~f~~ 242 (543)
|||||| |||+|+||||+||++++++||||+||||+|+||+||||||||++|||+||||+|||+|||+|||++|++
T Consensus 83 ~vmSFHqCGGNvGD~~~IPLP~WV~~~g~~~pDi~ftDr~G~rn~E~lSl~~D~~pvl~GRTplq~Y~DFm~SFr~~F~~ 162 (490)
T d1wdpa1 83 AIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSD 162 (490)
T ss_dssp EEEECSCBCCSTTCSCCBCSCHHHHHHHHHCGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHHTHH
T ss_pred EEEeecccCCCCCcccccCCcHHHHhhhccCCCceeecCCCCcccceeeeeeccccccCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccC-ceeEEEeeccCCccCCCCCCCCCCCCCcCCCCcccccccHHHHHHHHHHHHHcCCCCcCCCCCCCCCCCCCCCCC
Q 009121 243 FMGT-TITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQQHAEANGNPLWGLRGPHDAPSYDESPNS 321 (543)
Q Consensus 243 ~l~~-~I~eI~VGlGP~GELRYPSyp~~~g~W~~PGiGEFQCYDky~~~~lr~~a~~~gn~~WG~~gP~~ag~Yn~~P~~ 321 (543)
||++ ||+||+|||||||||||||||+++| |+||||||||||||||+++||++|+++||++|| ||+|+|+||++|++
T Consensus 163 ~~~~g~I~eI~VGlGP~GELRYPSYp~~~G-w~yPGiGEFQCYDky~~~~l~~aA~~~G~~~Wg--~P~dag~yn~~P~~ 239 (490)
T d1wdpa1 163 FLESGLIIDIEVGLGPAGELRYPSYPQSQG-WEFPGIGEFQCYDKYLKADFKAAVARAGHPEWE--LPDDAGKYNDVPES 239 (490)
T ss_dssp HHHTTCEEEEEECCSGGGBSSCCCSCGGGT-CCTTCCCCCCCCSHHHHHHHHHHHHHTTCTTCC--SCSSSCCTTCCGGG
T ss_pred hccCCeEEEEEeccccCccccCCCCccccC-CcCCCcceeeeCCHHHHHHHHHHHHHhCCcccC--CCCcCccCCCCCCC
Confidence 9977 9999999999999999999999999 999999999999999999999999999999997 69999999999999
Q ss_pred CCcccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEecceeecCCCCCChhhhcccccCCCCCC
Q 009121 322 NSFFKDNGGSWESPYGDFFLSWYSSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGLYNTAKRD 401 (543)
Q Consensus 322 t~FF~~~gg~~~s~YGrFFL~WYs~~L~~HgdrIL~~A~~~F~~~~v~l~aKV~GIHWwy~t~SHaAElTAGyYNt~~rd 401 (543)
|+||+++ |+|+|+||||||+|||++|++||||||+.|+++|++++|+|++|||||||||+|+|||||||||||||++||
T Consensus 240 t~FF~~~-G~~~s~YGkFFL~WYs~~Ll~HgdrvL~~A~~~F~g~~v~l~aKv~GIHWwY~t~SHaAElTAGyYNt~~rD 318 (490)
T d1wdpa1 240 TGFFKSN-GTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRD 318 (490)
T ss_dssp STTTSTT-SGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEECCCCCTTTTSTTCHHHHHHTCCCBTTBC
T ss_pred CCCCCCC-CccccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeecccCCCCCChHHHhccccCCCCCc
Confidence 9999986 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHhhCCcEEEEeecccCCCCCCCCCCCChHHHHHHHHHHHHhcCCeeeccccccCCCcchHHHHHHhccCC--
Q 009121 402 GYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGE-- 479 (543)
Q Consensus 402 GY~~Ia~mf~rh~~~l~FTClEM~d~e~p~~~~s~Pe~Lv~QV~~aa~~~Gv~~~GENAL~~~d~~~~~qi~~~~~~~-- 479 (543)
||+|||+|||||+|+|+||||||+|++||++++|+||+||+||+++|+++||+|+|||||+|||+++|+||++++...
T Consensus 319 GY~~Ia~m~~rh~~~l~FTC~EM~d~eq~~~a~s~PE~Lv~QV~~aa~~~Gv~vaGENAL~~~d~~~~~qI~~~~~~~~~ 398 (490)
T d1wdpa1 319 GYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNARPQGV 398 (490)
T ss_dssp SSHHHHHHHHTTTCEEEECCTTCCGGGSCGGGCCCHHHHHHHHHHHHHHTTCCEEEECSSCCCSHHHHHHHHHHHSTTCC
T ss_pred cHHHHHHHHHHcCCeEEEecccccccCCCccccCCHHHHHHHHHHHHHHcCCceeeeccchhcCchHHHHHHHhcccccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996543
Q ss_pred -------CCcceeEEeecCcccCCCCChhhHHHHHHHhccCCCCCCCCCCcccchhccccccCC
Q 009121 480 -------NVVDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGDDLPVEEEVTESVHTNANT 536 (543)
Q Consensus 480 -------~~~~~FTylRm~~~lf~~~n~~~F~~FV~~m~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (543)
.++++||||||++.||+++||++|++|||+||++.....|--+..++..+++||...
T Consensus 399 ~~~~~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~M~~~~~~~~~~~~~~~~~~pl~~s~~~ 462 (490)
T d1wdpa1 399 NNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHADQDYCANPQKYNHAITPLKPSAPK 462 (490)
T ss_dssp CTTSSCSSCCSEEEESCCCHHHHSHHHHHHHHHHHHHHTTTCCCCSCGGGGTCCCCCCCCCCCC
T ss_pred cCCCCcccccceeeeecCCHhhcCcchHHHHHHHHHHhccCCCCCCChHHcCCccCccccCCCC
Confidence 158899999999999999999999999999999887755554556668899888754
|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
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| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
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| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
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| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
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| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
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| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
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| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} | Back information, alignment and structure |
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| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
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| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} | Back information, alignment and structure |
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| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} | Back information, alignment and structure |
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| >d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} | Back information, alignment and structure |
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| >d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
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| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
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| >d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
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| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
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| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
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| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
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| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
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| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
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| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
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| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
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| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} | Back information, alignment and structure |
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| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
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| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
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| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
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| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
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| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
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| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
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| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
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| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
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| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
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| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
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| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} | Back information, alignment and structure |
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| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
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| >d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} | Back information, alignment and structure |
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| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
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| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
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| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
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| >d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
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| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
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| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
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| >d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]} | Back information, alignment and structure |
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| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
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| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
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| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
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| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
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| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
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| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
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| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
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| >d1gqna_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
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| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
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| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
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| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
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