Citrus Sinensis ID: 009135

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540--
MGSSCRSCRWLRLFVVVLLLGFLVCTSFCRAQDDSEPDDEITAVYIVTLKQAPSVHRFAQELRRGNKNHGFHKQNGTSGRLSRLNNPRNVSISHPRSGYNISRVHDSILRRAFKGEKYLKLYSYHYLINGFSVFVTPQQAEKLSRRREVANVVSDFSVRTATTHTPQFLGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKVQFLCLLCRQH
cccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEccccccccHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccEEEEEEcccEEEEEEEccHHHHHHHHccccEEEEEEcccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccEEEEccccccccccccccEEEEEEccccHHHcccccccccccccccccccccccHHccccccccccccccccccEEccccccccEEEEEEEcccccccHHHHHHHHHHHHHccccEEEEEcccccccccccccccHHHHHHHHHHHcccEEEEccccccccccccccccccEEEEEcccccccEEEEEEEccccEEEEEEccccccccccEEEccccccccccccccccccccccccccccccccccEEEEccccccccccHHHHHHHHHHHHcccEEEEEEEcccccccccccccccccEEEEcHHHHHHHHHHHHHHccc
cccccHHHHHHHHHHHHHHHHHHHEHHcEccccccccccccEEEEEEEEccccEEEEEccEEEEEEccccccccEEEEccccccccEEEcccccccHHHHHHHHHHHHHHHHcccccccEEEEEcccEccEEEEccHHHHHHHHHcccEEEEEcccEEEEcccccHHHccccccccccccccccccccEEEEEEcccccccccccccccccccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHcccccccccEEEEcccccEccccccEEEEEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEcccccccccHHcccHHHHHHHHHHHcccEEEEEccccccccccEcccccEEEEEEccccccccccEEEEcccEEEEEEEcccccccccccEEEEEcccccccccccccHHHHcccccccHHHcccEEEEEEccccccccccHHHHHHHHHHHcccEEEEEEEcccccccEcccccccccEEEEcccccHHHHHHHHHHccc
mgsscrscrWLRLFVVVLLLGFLVCTSfcraqddsepddeITAVYIVTLKQAPSVHRFAQELRrgnknhgfhkqngtsgrlsrlnnprnvsishprsgynisrVHDSILRRAFKGEKYLKLYSYHYLINgfsvfvtpqqaeKLSRRREVANVVSDFSvrtatthtpqflglpqgawiqeggyetagegVVIGFidtgidpthpsfaddasehsypvpshfsgicevtrdfpsgscnrkligarHFAASAITRgifnssqdyaspfdgdghgshtasvaagnhgipvvvtghhfgnasgmaprSHIAVYKALYKSFGGFAADVVAAIDQAAqdgvdiislsitpnrrppgiatffnPIDMALLSAAKAGIFVVQaagntgpspksmssfspwiftvgaashdriytnsiilgnsltisgvglapgtDKMYTLISALHAlnnnttttddmyvgecqdssnfnqdlvqgnlLICSYSIRFVLGLSTIKQAFETAKNLsaagivfymdpfvigfqlnptpmkmpgiiipspddsKVQFLCLLCRQH
mgsscrscrwLRLFVVVLLLGFLVCTSFCraqddsepddEITAVYIVTLKQAPSVHRFAQELrrgnknhgfhkqngtsgrlsrlnnprnvsishprsgynisrvhDSILRRAFKGEKYLKLYSYHYLINGFSVFVTPQQAEKLSRRREVANVVSDFsvrtatthtpqflglpqGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIIslsitpnrrppGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKVQFLCLLCRQH
MGSSCRSCRWlrlfvvvlllgflvCTSFCRAQDDSEPDDEITAVYIVTLKQAPSVHRFAQELRRGNKNHGFHKQNGTSGRLSRLNNPRNVSISHPRSGYNISRVHDSILRRAFKGEKYLKLYSYHYLINGFSVFVTPQQAEKLSRRREVANVVSDFSVRTATTHTPQFLGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFaadvvaaidqaaqdgvdiiSLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALnnnttttDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKVQFLCLLCRQH
*****RSCRWLRLFVVVLLLGFLVCTSFCRAQD*****DEITAVYIVTLKQAPSVHRF****************************************YNISRVHDSILRRAFKGEKYLKLYSYHYLINGFSVFVTPQQAEKLSRRREVANVVSDFSVRTATTHTPQFLGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPT*************PVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSS*****************SVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAA************FSPWIFTVGAASHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKVQFLCLLC***
*********WLRLFVVVLLLGFLVCTSF***********EITAVYIVTLKQAPSVHRFAQELR**********************************************************YSYHYLINGFSVFVTPQQAEKLSRRREVANVVSDFSVRTATTHTPQFLGLPQ***********AGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKVQF*CLLC***
MGSSCRSCRWLRLFVVVLLLGFLVCTSFCRAQDDSEPDDEITAVYIVTLKQAPSVHRFAQELRRGNKNHGFHKQNGTSGRLSRLNNPRNVSISHPRSGYNISRVHDSILRRAFKGEKYLKLYSYHYLINGFSVFVTPQ***********ANVVSDFSVRTATTHTPQFLGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAG*********SSFSPWIFTVGAASHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKVQFLCLLCRQH
****CRSCRWLRLFVVVLLLGFLVCTSFCRAQDDSEPDDEITAVYIVTLKQAPSVHRFAQELRRGNKNHGFHKQNGTSGRLSRLNNPRNVSISHPRSGYNISRVHDSILRRAFKGEKYLKLYSYHYLINGFSVFVTPQQAEKLSRRREVANVVSDFSVRTATTHTPQFLGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGI*******ASP***DGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKVQFLCLLCRQ*
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGSSCRSCRWLRLFVVVLLLGFLVCTSFCRAQDDSEPDDEITAVYIVTLKQAPSVHRFAQELRRGNKNHGFHKQNGTSGRLSRLNNPRNVSISHPRSGYNISRVHDSILRRAFKGEKYLKLYSYHYLINGFSVFVTPQQAEKLSRRREVANVVSDFSVRTATTHTPQFLGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKVQFLCLLCRQH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query542 2.2.26 [Sep-21-2011]
O65351 757 Subtilisin-like protease no no 0.653 0.467 0.353 3e-49
O64495 775 Subtilisin-like protease no no 0.623 0.436 0.352 3e-45
Q39547 731 Cucumisin OS=Cucumis melo N/A no 0.608 0.451 0.340 9e-41
Q9LLL8 749 Xylem serine proteinase 1 no no 0.677 0.489 0.309 6e-38
P29141 806 Minor extracellular prote yes no 0.636 0.428 0.228 5e-08
Q02470 1902 PII-type proteinase OS=La N/A no 0.422 0.120 0.282 2e-07
P15293 1902 PII-type proteinase OS=La N/A no 0.424 0.120 0.272 4e-07
P15292 1962 PIII-type proteinase OS=L yes no 0.424 0.117 0.272 5e-07
P16271 1902 PI-type proteinase OS=Lac N/A no 0.511 0.145 0.254 6e-07
P00781274 Subtilisin DY OS=Bacillus no no 0.261 0.518 0.281 2e-06
>sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1 Back     alignment and function desciption
 Score =  196 bits (499), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/379 (35%), Positives = 207/379 (54%), Gaps = 25/379 (6%)

Query: 102 SRVHDSILRRAFKGEKYLKLYSYHYLINGFSVFVTPQQAEKLSRRREVANVVSDFSVRTA 161
           S  +DS LR      + L  Y+Y   I+GFS  +T ++A+ L  +  V +V+ +      
Sbjct: 49  SNWYDSSLRSISDSAELL--YTYENAIHGFSTRLTQEEADSLMTQPGVISVLPEHRYELH 106

Query: 162 TTHTPQFLGLPQ---GAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPS 218
           TT TP FLGL +     + + G Y      VV+G +DTG+ P   S++D   E   P+PS
Sbjct: 107 TTRTPLFLGLDEHTADLFPEAGSYSD----VVVGVLDTGVWPESKSYSD---EGFGPIPS 159

Query: 219 HFSGICEVTRDFPSGSCNRKLIGARHFA-ASAITRGIFNSSQDYASPFDGDGHGSHTASV 277
            + G CE   +F +  CNRKLIGAR FA     T G  + S++  SP D DGHG+HT+S 
Sbjct: 160 SWKGGCEAGTNFTASLCNRKLIGARFFARGYESTMGPIDESKESRSPRDDDGHGTHTSST 219

Query: 278 AAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDII 337
           AAG+      + G+  G A GMAPR+ +AVYK  +   G F++D++AAID+A  D V+++
Sbjct: 220 AAGSVVEGASLLGYASGTARGMAPRARVAVYKVCWLG-GCFSSDILAAIDKAIADNVNVL 278

Query: 338 SLSITPNRRPPGIATFF-NPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVG 396
           S+S+       G++ ++ + + +   +A + GI V  +AGN GPS  S+S+ +PWI TVG
Sbjct: 279 SMSLGG-----GMSDYYRDGVAIGAFAAMERGILVSCSAGNAGPSSSSLSNVAPWITTVG 333

Query: 397 AASHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDS 456
           A + DR +    ILGN    +GV L  G      L+  ++A N +  T  ++    C  +
Sbjct: 334 AGTLDRDFPALAILGNGKNFTGVSLFKGEALPDKLLPFIYAGNASNATNGNL----CM-T 388

Query: 457 SNFNQDLVQGNLLICSYSI 475
                + V+G +++C   I
Sbjct: 389 GTLIPEKVKGKIVMCDRGI 407
Serine protease. Has a substrate preference for the hydrophobic residues Phe and Ala and the basic residue Asp in the P1 position, and for Asp, Leu or Ala in the P1' position.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: -
>sp|O64495|SDD1_ARATH Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2 SV=1 Back     alignment and function description
>sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1 Back     alignment and function description
>sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1 Back     alignment and function description
>sp|P29141|SUBV_BACSU Minor extracellular protease vpr OS=Bacillus subtilis (strain 168) GN=vpr PE=1 SV=1 Back     alignment and function description
>sp|Q02470|P2P_LACPA PII-type proteinase OS=Lactobacillus paracasei GN=prtP PE=1 SV=1 Back     alignment and function description
>sp|P15293|P2P_LACLC PII-type proteinase OS=Lactococcus lactis subsp. cremoris GN=prt PE=3 SV=1 Back     alignment and function description
>sp|P15292|P3P_LACLS PIII-type proteinase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=prtP PE=1 SV=2 Back     alignment and function description
>sp|P16271|P1P_LACLC PI-type proteinase OS=Lactococcus lactis subsp. cremoris GN=prtP PE=3 SV=1 Back     alignment and function description
>sp|P00781|SUBD_BACLI Subtilisin DY OS=Bacillus licheniformis GN=apr PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query542
255578037524 peptidase, putative [Ricinus communis] g 0.955 0.988 0.810 0.0
296089234 842 unnamed protein product [Vitis vinifera] 0.946 0.609 0.791 0.0
224115250 837 predicted protein [Populus trichocarpa] 0.935 0.605 0.804 0.0
224117852 824 predicted protein [Populus trichocarpa] 0.898 0.591 0.797 0.0
449434210 859 PREDICTED: subtilisin-like protease SDD1 0.896 0.565 0.768 0.0
449490755 842 PREDICTED: LOW QUALITY PROTEIN: subtilis 0.892 0.574 0.766 0.0
359483988 818 PREDICTED: subtilisin-like protease [Vit 0.902 0.597 0.75 0.0
297799994 857 subtilase family protein [Arabidopsis ly 0.963 0.609 0.709 0.0
18415500 856 Subtilase family protein [Arabidopsis th 0.952 0.602 0.711 0.0
356528418 824 PREDICTED: subtilisin-like protease-like 0.904 0.594 0.775 0.0
>gi|255578037|ref|XP_002529889.1| peptidase, putative [Ricinus communis] gi|223530616|gb|EEF32492.1| peptidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  856 bits (2211), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/528 (81%), Positives = 467/528 (88%), Gaps = 10/528 (1%)

Query: 10  WLRLFVVVLLLGFLVCTSFCRAQDDSEPDDEITAVYIVTLKQAPSVHRFAQELRRGNKNH 69
           +L   +VV  LG +V  S C+   ++  D    AVYIVTLKQAP  H F  ELR+  + +
Sbjct: 5   YLVQLMVVFCLGIIVGVS-CQ---NNNSDSATAAVYIVTLKQAPVAHYFDGELRK--ETN 58

Query: 70  GFHKQNGTSGRLSRLNNPRNVSISHPRSGYNISRVHDSILRRAFKGEKYLKLYSYHYLIN 129
            F  ++  SGR +R++  R+ S SH  SG  ISRVHDSILRR  +GEKYLKLYSYHYLIN
Sbjct: 59  VF--RHSPSGRRNRMHRSRSNSSSHGNSGSYISRVHDSILRRVLRGEKYLKLYSYHYLIN 116

Query: 130 GFSVFVTPQQAEKLSRRREVANVVSDFSVRTATTHTPQFLGLPQGAWIQEGGYETAGEGV 189
           GF+V VTPQQA+KL RRREVANVV DFSVRTATTHTPQFLGLP+GAW++EGGYETAGEG+
Sbjct: 117 GFAVLVTPQQADKLLRRREVANVVLDFSVRTATTHTPQFLGLPKGAWVKEGGYETAGEGI 176

Query: 190 VIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASA 249
           VIGF+DTG+DPTHPSFADD SEHSYPVP HFSG+CEVTRDFPSGSCNRKLI ARHFAASA
Sbjct: 177 VIGFVDTGVDPTHPSFADDVSEHSYPVPGHFSGVCEVTRDFPSGSCNRKLIAARHFAASA 236

Query: 250 ITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYK 309
           ITRGIFNS+QDYASPFDGDGHG+HTASVAAGNHGIPV+V GHHFGNASGMAPRSHIAVYK
Sbjct: 237 ITRGIFNSTQDYASPFDGDGHGTHTASVAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYK 296

Query: 310 ALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGI 369
           ALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPG+ATFFNPIDMALLSA KAGI
Sbjct: 297 ALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGLATFFNPIDMALLSAVKAGI 356

Query: 370 FVVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRIYTNSIILGNSLTISGVGLAPGT--DK 427
           FVVQAAGNTGPSPKS+SSFSPWIFTVGAASHDR+YTNSI+LGN+LTI GVGLAPGT  D 
Sbjct: 357 FVVQAAGNTGPSPKSVSSFSPWIFTVGAASHDRVYTNSIVLGNNLTIPGVGLAPGTAKDT 416

Query: 428 MYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQA 487
           MYTLISA+HALNN TT   DMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQA
Sbjct: 417 MYTLISAMHALNNATTAATDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQA 476

Query: 488 FETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKVQFL 535
           FETAKNLSA G+VFYMDPFVIG++LNPTPM+MPGIII SPDDSKV+ L
Sbjct: 477 FETAKNLSATGVVFYMDPFVIGYRLNPTPMRMPGIIIASPDDSKVKIL 524

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296089234|emb|CBI39006.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224115250|ref|XP_002332198.1| predicted protein [Populus trichocarpa] gi|222875305|gb|EEF12436.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224117852|ref|XP_002317684.1| predicted protein [Populus trichocarpa] gi|222860749|gb|EEE98296.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449434210|ref|XP_004134889.1| PREDICTED: subtilisin-like protease SDD1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449490755|ref|XP_004158698.1| PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease SDD1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359483988|ref|XP_002271023.2| PREDICTED: subtilisin-like protease [Vitis vinifera] Back     alignment and taxonomy information
>gi|297799994|ref|XP_002867881.1| subtilase family protein [Arabidopsis lyrata subsp. lyrata] gi|297313717|gb|EFH44140.1| subtilase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18415500|ref|NP_567601.1| Subtilase family protein [Arabidopsis thaliana] gi|5262166|emb|CAB45809.1| putative serine proteinase [Arabidopsis thaliana] gi|7268839|emb|CAB79043.1| putative serine proteinase [Arabidopsis thaliana] gi|332658928|gb|AEE84328.1| Subtilase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356528418|ref|XP_003532800.1| PREDICTED: subtilisin-like protease-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query542
TAIR|locus:2128595 856 AT4G20430 "AT4G20430" [Arabido 0.922 0.584 0.698 7.2e-191
UNIPROTKB|Q94EF5 849 P0665A11.6 "Uncharacterized pr 0.915 0.584 0.682 1.4e-187
TAIR|locus:2163446 840 AT5G44530 "AT5G44530" [Arabido 0.894 0.577 0.676 1.4e-185
TAIR|locus:2204619 832 AT1G30600 "AT1G30600" [Arabido 0.900 0.586 0.648 2e-173
TAIR|locus:2059052 815 SLP3 "AT2G19170" [Arabidopsis 0.865 0.575 0.454 1.5e-106
UNIPROTKB|Q5Z852 820 P0468G03.18 "Putative meiotic 0.791 0.523 0.466 4.5e-105
TAIR|locus:2126485 816 AT4G30020 "AT4G30020" [Arabido 0.863 0.573 0.457 1.2e-104
TAIR|locus:2027139 832 ALE1 "AT1G62340" [Arabidopsis 0.795 0.518 0.417 5.3e-89
UNIPROTKB|Q0JBB7 815 Os04g0543700 "Os04g0543700 pro 0.773 0.514 0.399 1.4e-78
UNIPROTKB|Q6ZKR5 796 OJ1117_F10.11 "Os08g0452100 pr 0.632 0.430 0.347 5.8e-48
TAIR|locus:2128595 AT4G20430 "AT4G20430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1830 (649.3 bits), Expect = 7.2e-191, Sum P(2) = 7.2e-191
 Identities = 356/510 (69%), Positives = 414/510 (81%)

Query:    32 QDDSEPDD--EITAVYIVTLKQAPSVHRFAQELRRGNKNHGFHKQNGTSGRLSRLN-NPR 88
             QD+    D    TAVYIVTL+QA S+H F QE     +     K   TS + +R    PR
Sbjct:    26 QDNGGDSDINSTTAVYIVTLRQASSLHLFQQEAEEVKRVRDQSKHGDTS-KFTRPKLQPR 84

Query:    89 NVSIS-HPRSGYN-ISRVHDSILRRAFKGEKYLKLYSYHYLINGFSVFVTPQQAEKLSRR 146
             N+S S + RS  + I++ HDS+LR A KGEKY+KLYS+HYLINGF+VFV+ QQAE LSRR
Sbjct:    85 NISRSRYWRSRRSAIAQAHDSLLRNALKGEKYIKLYSFHYLINGFAVFVSSQQAETLSRR 144

Query:   147 REVANVVSDFSVRTATTHTPQFLGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSF- 205
             REVAN+V DFSVRTATT+TPQF+GLP+GAW++EGGYETAGEG+VIGFIDTGIDPTHPSF 
Sbjct:   145 REVANIVLDFSVRTATTYTPQFMGLPKGAWVKEGGYETAGEGIVIGFIDTGIDPTHPSFN 204

Query:   206 ADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQDYASPF 265
               D S+  YP+P+HFSG+CEVT DFPSGSCNRKL+GARHFA SAITRGIFNSS+DYASPF
Sbjct:   205 GTDTSQRQYPIPNHFSGVCEVTPDFPSGSCNRKLVGARHFAQSAITRGIFNSSEDYASPF 264

Query:   266 DGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFXXXXXXX 325
             DGDGHG+HTAS+AAGNHG+  VV+GH+FG+ASG+APR+HI+VYKALYKSFGGF       
Sbjct:   265 DGDGHGTHTASIAAGNHGVSAVVSGHNFGSASGIAPRAHISVYKALYKSFGGFAADVVAA 324

Query:   326 XXXXXXXXXXXXSLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSM 385
                         SLSITPNRRPPG+ATFFNP+DMA+LSA KAGIFVVQAAGNTGPSPKSM
Sbjct:   325 IDQAAQDGVDILSLSITPNRRPPGVATFFNPLDMAMLSAVKAGIFVVQAAGNTGPSPKSM 384

Query:   386 SSFSPWIFTVGAASHDRIYTNSIILGNSLTISGVGLAPGTD--KMYTLISALHALXXXXX 443
             SSFSPWIFTVGAASHDR Y+NSI+LGN+++I GVGLA  TD  K YT+ISAL AL     
Sbjct:   385 SSFSPWIFTVGAASHDRDYSNSIVLGNNVSIPGVGLALRTDEGKKYTMISALDALKNKSS 444

Query:   444 XXD-DMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFY 502
               D DMYVGECQD  +F++D+++GNLLICSYSIRFVLGLSTIKQA   AKNLSA G+VFY
Sbjct:   445 VVDKDMYVGECQDYGSFDKDVIRGNLLICSYSIRFVLGLSTIKQALAVAKNLSAKGVVFY 504

Query:   503 MDPFVIGFQLNPTPMKMPGIIIPSPDDSKV 532
             MDP+V+GFQ+NPTPM MPGIIIPS +DSKV
Sbjct:   505 MDPYVLGFQINPTPMDMPGIIIPSAEDSKV 534
GO:0004252 "serine-type endopeptidase activity" evidence=IEA;IBA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IBA
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008152 "metabolic process" evidence=IBA
GO:0042802 "identical protein binding" evidence=IEA
GO:0043086 "negative regulation of catalytic activity" evidence=IEA
GO:0000911 "cytokinesis by cell plate formation" evidence=RCA
UNIPROTKB|Q94EF5 P0665A11.6 "Uncharacterized protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2163446 AT5G44530 "AT5G44530" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2204619 AT1G30600 "AT1G30600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059052 SLP3 "AT2G19170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5Z852 P0468G03.18 "Putative meiotic serine proteinase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2126485 AT4G30020 "AT4G30020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027139 ALE1 "AT1G62340" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q0JBB7 Os04g0543700 "Os04g0543700 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q6ZKR5 OJ1117_F10.11 "Os08g0452100 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.21LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00035189001
SubName- Full=Chromosome chr10 scaffold_76, whole genome shotgun sequence; (834 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00002716001
SubName- Full=Chromosome chr1 scaffold_135, whole genome shotgun sequence; (179 aa)
  •     0.409

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query542
cd04852307 cd04852, Peptidases_S8_3, Peptidase S8 family doma 1e-111
cd07474295 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptid 1e-32
cd07487264 cd07487, Peptidases_S8_1, Peptidase S8 family doma 4e-30
cd00306241 cd00306, Peptidases_S8_S53, Peptidase domain in th 3e-21
cd07477229 cd07477, Peptidases_S8_Subtilisin_subset, Peptidas 9e-18
cd07484260 cd07484, Peptidases_S8_Thermitase_like, Peptidase 6e-17
cd04848267 cd04848, Peptidases_S8_Autotransporter_serine_prot 1e-15
pfam00082277 pfam00082, Peptidase_S8, Subtilase family 1e-14
cd07475346 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 7e-14
cd04077255 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Pep 1e-13
cd07489312 cd07489, Peptidases_S8_5, Peptidase S8 family doma 3e-13
cd07473259 cd07473, Peptidases_S8_Subtilisin_like, Peptidase 1e-12
cd02120126 cd02120, PA_subtilisin_like, PA_subtilisin_like: P 1e-12
cd07482294 cd07482, Peptidases_S8_Lantibiotic_specific_protea 3e-12
cd07481264 cd07481, Peptidases_S8_BacillopeptidaseF-like, Pep 1e-11
cd04842293 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 1e-10
cd07498242 cd07498, Peptidases_S8_15, Peptidase S8 family dom 5e-10
cd07490254 cd07490, Peptidases_S8_6, Peptidase S8 family doma 1e-09
cd07480297 cd07480, Peptidases_S8_12, Peptidase S8 family dom 3e-09
pfam0592276 pfam05922, Inhibitor_I9, Peptidase inhibitor I9 5e-09
cd07496285 cd07496, Peptidases_S8_13, Peptidase S8 family dom 1e-07
COG1404508 COG1404, AprE, Subtilisin-like serine proteases [P 5e-07
cd07478 455 cd07478, Peptidases_S8_CspA-like, Peptidase S8 fam 5e-07
cd07493261 cd07493, Peptidases_S8_9, Peptidase S8 family doma 1e-05
TIGR03921350 TIGR03921, T7SS_mycosin, type VII secretion-associ 4e-05
cd07485273 cd07485, Peptidases_S8_Fervidolysin_like, Peptidas 6e-05
cd07491247 cd07491, Peptidases_S8_7, Peptidase S8 family doma 2e-04
cd05561239 cd05561, Peptidases_S8_4, Peptidase S8 family doma 4e-04
cd07497311 cd07497, Peptidases_S8_14, Peptidase S8 family dom 4e-04
cd07476267 cd07476, Peptidases_S8_thiazoline_oxidase_subtilis 5e-04
cd04059297 cd04059, Peptidases_S8_Protein_convertases_Kexins_ 6e-04
cd07492222 cd07492, Peptidases_S8_8, Peptidase S8 family doma 0.001
PTZ00262639 PTZ00262, PTZ00262, subtilisin-like protease; Prov 0.003
>gnl|CDD|173795 cd04852, Peptidases_S8_3, Peptidase S8 family domain, uncharacterized subfamily 3 Back     alignment and domain information 
 Score =  332 bits (854), Expect = e-111
 Identities = 115/239 (48%), Positives = 145/239 (60%), Gaps = 7/239 (2%)

Query: 161 ATTHTPQFLGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHF 220
            TT +P FLGLP        G   AGEG++IG +DTGI P HPSFAD       P P  +
Sbjct: 4   HTTRSPDFLGLPGAWGGSLLGAANAGEGIIIGVLDTGIWPEHPSFAD---VGGGPYPHTW 60

Query: 221 SGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAG 280
            G C    DF   SCN KLIGAR+F+      G FNS  +Y SP D DGHG+HTAS AAG
Sbjct: 61  PGDCVTGEDFNPFSCNNKLIGARYFSDGYDAYGGFNSDGEYRSPRDYDGHGTHTASTAAG 120

Query: 281 NHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLS 340
           N  +   V G  FG ASG+APR+ IAVYK  +   G F +D++AAIDQA  DGVD+IS S
Sbjct: 121 NVVVNASVGGFAFGTASGVAPRARIAVYKVCWPDGGCFGSDILAAIDQAIADGVDVISYS 180

Query: 341 ITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAAS 399
           I      P    + +PI +A L A +AGIFV  +AGN+GP   ++ + +PW+ TV A++
Sbjct: 181 IGGGSPDP----YEDPIAIAFLHAVEAGIFVAASAGNSGPGASTVPNVAPWVTTVAAST 235

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 307
>gnl|CDD|173800 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family domain in Vpr-like proteins Back     alignment and domain information
>gnl|CDD|173812 cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1 Back     alignment and domain information
>gnl|CDD|173787 cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families Back     alignment and domain information
>gnl|CDD|173803 cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins Back     alignment and domain information
>gnl|CDD|173810 cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins Back     alignment and domain information
>gnl|CDD|173794 cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases Back     alignment and domain information
>gnl|CDD|215701 pfam00082, Peptidase_S8, Subtilase family Back     alignment and domain information
>gnl|CDD|173801 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases Back     alignment and domain information
>gnl|CDD|173790 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins Back     alignment and domain information
>gnl|CDD|173814 cd07489, Peptidases_S8_5, Peptidase S8 family domain, uncharacterized subfamily 5 Back     alignment and domain information
>gnl|CDD|173799 cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>gnl|CDD|239035 cd02120, PA_subtilisin_like, PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases Back     alignment and domain information
>gnl|CDD|173808 cd07482, Peptidases_S8_Lantibiotic_specific_protease, Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases Back     alignment and domain information
>gnl|CDD|173807 cd07481, Peptidases_S8_BacillopeptidaseF-like, Peptidase S8 family domain in BacillopeptidaseF-like proteins Back     alignment and domain information
>gnl|CDD|173791 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 family domain in Kp43 proteases Back     alignment and domain information
>gnl|CDD|173822 cd07498, Peptidases_S8_15, Peptidase S8 family domain, uncharacterized subfamily 15 Back     alignment and domain information
>gnl|CDD|173815 cd07490, Peptidases_S8_6, Peptidase S8 family domain, uncharacterized subfamily 6 Back     alignment and domain information
>gnl|CDD|173806 cd07480, Peptidases_S8_12, Peptidase S8 family domain, uncharacterized subfamily 12 Back     alignment and domain information
>gnl|CDD|203351 pfam05922, Inhibitor_I9, Peptidase inhibitor I9 Back     alignment and domain information
>gnl|CDD|173820 cd07496, Peptidases_S8_13, Peptidase S8 family domain, uncharacterized subfamily 13 Back     alignment and domain information
>gnl|CDD|224322 COG1404, AprE, Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|173804 cd07478, Peptidases_S8_CspA-like, Peptidase S8 family domain in CspA-like proteins Back     alignment and domain information
>gnl|CDD|173818 cd07493, Peptidases_S8_9, Peptidase S8 family domain, uncharacterized subfamily 9 Back     alignment and domain information
>gnl|CDD|234398 TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin Back     alignment and domain information
>gnl|CDD|173811 cd07485, Peptidases_S8_Fervidolysin_like, Peptidase S8 family domain in Fervidolysin Back     alignment and domain information
>gnl|CDD|173816 cd07491, Peptidases_S8_7, Peptidase S8 family domain, uncharacterized subfamily 7 Back     alignment and domain information
>gnl|CDD|173797 cd05561, Peptidases_S8_4, Peptidase S8 family domain, uncharacterized subfamily 4 Back     alignment and domain information
>gnl|CDD|173821 cd07497, Peptidases_S8_14, Peptidase S8 family domain, uncharacterized subfamily 14 Back     alignment and domain information
>gnl|CDD|173802 cd07476, Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease, Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases Back     alignment and domain information
>gnl|CDD|173789 cd04059, Peptidases_S8_Protein_convertases_Kexins_Furin-like, Peptidase S8 family domain in Protein convertases Back     alignment and domain information
>gnl|CDD|173817 cd07492, Peptidases_S8_8, Peptidase S8 family domain, uncharacterized subfamily 8 Back     alignment and domain information
>gnl|CDD|240338 PTZ00262, PTZ00262, subtilisin-like protease; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 542
cd04852307 Peptidases_S8_3 Peptidase S8 family domain, unchar 100.0
KOG1153501 consensus Subtilisin-related protease/Vacuolar pro 100.0
PTZ00262639 subtilisin-like protease; Provisional 100.0
cd07479255 Peptidases_S8_SKI-1_like Peptidase S8 family domai 100.0
cd07491247 Peptidases_S8_7 Peptidase S8 family domain, unchar 99.98
cd07476267 Peptidases_S8_thiazoline_oxidase_subtilisin-like_p 99.98
cd07483291 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 fa 99.98
cd07485273 Peptidases_S8_Fervidolysin_like Peptidase S8 famil 99.97
cd05561239 Peptidases_S8_4 Peptidase S8 family domain, unchar 99.97
cd07496285 Peptidases_S8_13 Peptidase S8 family domain, uncha 99.97
cd07484260 Peptidases_S8_Thermitase_like Peptidase S8 family 99.97
cd07497311 Peptidases_S8_14 Peptidase S8 family domain, uncha 99.97
cd04077255 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 99.97
cd07498242 Peptidases_S8_15 Peptidase S8 family domain, uncha 99.97
cd07481264 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 99.97
cd07475346 Peptidases_S8_C5a_Peptidase Peptidase S8 family do 99.97
cd07489312 Peptidases_S8_5 Peptidase S8 family domain, unchar 99.96
cd07493261 Peptidases_S8_9 Peptidase S8 family domain, unchar 99.96
cd07477229 Peptidases_S8_Subtilisin_subset Peptidase S8 famil 99.96
cd07487264 Peptidases_S8_1 Peptidase S8 family domain, unchar 99.96
cd07482294 Peptidases_S8_Lantibiotic_specific_protease Peptid 99.96
cd07490254 Peptidases_S8_6 Peptidase S8 family domain, unchar 99.96
cd07473259 Peptidases_S8_Subtilisin_like Peptidase S8 family 99.96
cd04843277 Peptidases_S8_11 Peptidase S8 family domain, uncha 99.95
cd05562275 Peptidases_S53_like Peptidase domain in the S53 fa 99.95
cd07480297 Peptidases_S8_12 Peptidase S8 family domain, uncha 99.95
cd04842293 Peptidases_S8_Kp43_protease Peptidase S8 family do 99.95
cd04857412 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptid 99.95
cd07494298 Peptidases_S8_10 Peptidase S8 family domain, uncha 99.95
cd07474295 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 fam 99.95
cd04059297 Peptidases_S8_Protein_convertases_Kexins_Furin-lik 99.94
cd07492222 Peptidases_S8_8 Peptidase S8 family domain, unchar 99.94
cd04847291 Peptidases_S8_Subtilisin_like_2 Peptidase S8 famil 99.94
cd04848267 Peptidases_S8_Autotransporter_serine_protease_like 99.94
cd07478455 Peptidases_S8_CspA-like Peptidase S8 family domain 99.94
PF00082282 Peptidase_S8: Subtilase family This is family S8 i 99.92
KOG4266 1033 consensus Subtilisin kexin isozyme-1/site 1 protea 99.91
cd00306241 Peptidases_S8_S53 Peptidase domain in the S8 and S 99.88
KOG1114 1304 consensus Tripeptidyl peptidase II [Posttranslatio 99.81
cd07488247 Peptidases_S8_2 Peptidase S8 family domain, unchar 99.8
KOG3526 629 consensus Subtilisin-like proprotein convertase [P 99.74
COG1404508 AprE Subtilisin-like serine proteases [Posttransla 99.71
cd02129120 PA_hSPPL_like PA_hSPPL_like: Protease-associated d 99.4
cd02120126 PA_subtilisin_like PA_subtilisin_like: Protease-as 99.38
cd04817139 PA_VapT_like PA_VapT_like: Protease-associated dom 99.31
cd02127118 PA_hPAP21_like PA_hPAP21_like: Protease-associated 99.28
cd04816122 PA_SaNapH_like PA_SaNapH_like: Protease-associated 99.26
PF02225101 PA: PA domain; InterPro: IPR003137 The PA (Proteas 99.25
cd02122138 PA_GRAIL_like PA _GRAIL_like: Protease-associated 99.24
cd04813117 PA_1 PA_1: Protease-associated (PA) domain subgrou 99.22
cd02123153 PA_C_RZF_like PA_C-RZF_ like: Protease-associated 99.2
cd04056361 Peptidases_S53 Peptidase domain in the S53 family. 99.2
cd02126126 PA_EDEM3_like PA_EDEM3_like: protease associated d 99.2
cd02130122 PA_ScAPY_like PA_ScAPY_like: Protease-associated d 99.18
cd02125127 PA_VSR PA_VSR: Protease-associated (PA) domain-con 99.16
cd00538126 PA PA: Protease-associated (PA) domain. The PA dom 99.14
cd02132139 PA_GO-like PA_GO-like: Protease-associated domain 99.13
cd02133143 PA_C5a_like PA_C5a_like: Protease-associated domai 99.13
cd02124129 PA_PoS1_like PA_PoS1_like: Protease-associated (PA 99.12
cd04818118 PA_subtilisin_1 PA_subtilisin_1: Protease-associat 99.08
cd04819127 PA_2 PA_2: Protease-associated (PA) domain subgrou 99.03
PF0592282 Inhibitor_I9: Peptidase inhibitor I9; InterPro: IP 98.79
cd02128183 PA_TfR PA_TfR: Protease-associated domain containi 98.52
cd04815134 PA_M28_2 PA_M28_2: Protease-associated (PA) domain 98.44
cd04822151 PA_M28_1_3 PA_M28_1_3: Protease-associated (PA) do 98.3
cd04814142 PA_M28_1 PA_M28_1: Protease-associated (PA) domain 98.22
cd02121220 PA_GCPII_like PA_GCPII_like: Protease-associated d 98.14
cd04820137 PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) do 98.08
cd02131153 PA_hNAALADL2_like PA_hNAALADL2_like: Protease-asso 98.05
KOG2442 541 consensus Uncharacterized conserved protein, conta 98.02
KOG4628 348 consensus Predicted E3 ubiquitin ligase [Posttrans 97.74
KOG3525431 consensus Subtilisin-like proprotein convertase [P 97.51
KOG3920193 consensus Uncharacterized conserved protein, conta 97.47
COG4934 1174 Predicted protease [Posttranslational modification 96.44
cd04821157 PA_M28_1_2 PA_M28_1_2: Protease-associated (PA) do 95.78
>cd04852 Peptidases_S8_3 Peptidase S8 family domain, uncharacterized subfamily 3 Back     alignment and domain information 
Probab=100.00  E-value=7.4e-37  Score=311.88  Aligned_cols=234  Identities=50%  Similarity=0.791  Sum_probs=194.1

Q ss_pred             ccccCCCCCccCCCCcchhcc-cCCCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCC
Q 009135          158 VRTATTHTPQFLGLPQGAWIQ-EGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCN  236 (542)
Q Consensus       158 ~~~~~~~s~~~~gl~~~~w~~-~~~~~~~G~Gv~VaViDtGvd~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n  236 (542)
                      +++++++++.++++ ...|.. .+..+++|+||+|||||||||++||+|.+...   .+.+..|.+.+..+..+....++
T Consensus         1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~G~gv~VaViDtGid~~hp~f~~~~~---~~~~~~~~~~~~~~~~~~~~~~~   76 (307)
T cd04852           1 YQLHTTRSPDFLGL-PGAWGGSLLGAANAGEGIIIGVLDTGIWPEHPSFADVGG---GPYPHTWPGDCVTGEDFNPFSCN   76 (307)
T ss_pred             CCccccCCHHHcCC-CCCCCcccccccCCCCccEEEEEeCCCCCCCcCcccCCC---CCCCCCCCCcccCCCCcCccCcC
Confidence            35677888888984 556765 44558999999999999999999999998765   56677899988888877777899


Q ss_pred             ceeeeeeeccccccccCccCCCCCCCCCCCCCCChhhhhhhhhccCCCCcccccccCCCcccccCCCeEEEEEeccCCCC
Q 009135          237 RKLIGARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFG  316 (542)
Q Consensus       237 ~ki~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~  316 (542)
                      +|+++.++|..+.......+...+..++.|..||||||||||+|+...+....|...+.+.||||+|+|+.+|+++..+.
T Consensus        77 ~ki~g~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~VAgiiag~~~~~~~~~~~~~~~~~GvAP~a~l~~~kv~~~~~~  156 (307)
T cd04852          77 NKLIGARYFSDGYDAYGGFNSDGEYRSPRDYDGHGTHTASTAAGNVVVNASVGGFAFGTASGVAPRARIAVYKVCWPDGG  156 (307)
T ss_pred             CeEEEEEEcccchhhccCcccccCCCCCccCCCCchhhhhhhcCCCcccccccccccccEEEECCCCeEEEEEEecCCCC
Confidence            99999999988654332233444566778999999999999999876554444445566889999999999999998667


Q ss_pred             CCHHHHHHHHHHHhhCCCcEEEeccCCCCCCCCCCCcchHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCcEEEEe
Q 009135          317 GFAADVVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVG  396 (542)
Q Consensus       317 ~~~~~i~~ai~~a~~~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~GilvV~AAGN~G~~~~~~~~~~p~vitVg  396 (542)
                      +..+++++++++|++++++|||||||....    ..+.+.++.++..+.++|++||+||||+|+...+.++..|++|+||
T Consensus       157 ~~~~~~~~ai~~a~~~g~~Vin~S~G~~~~----~~~~~~~~~~~~~a~~~gilvV~aAGN~g~~~~~~~~~~~~vi~Vg  232 (307)
T cd04852         157 CFGSDILAAIDQAIADGVDVISYSIGGGSP----DPYEDPIAIAFLHAVEAGIFVAASAGNSGPGASTVPNVAPWVTTVA  232 (307)
T ss_pred             ccHHHHHHHHHHHHHcCCCEEEeCCCCCCC----CcccCHHHHHHHHHHhCCCEEEEECCCCCCCCCcccCCCCCeEEEE
Confidence            889999999999999999999999998653    2234678888889999999999999999988888889999999999


Q ss_pred             ccc
Q 009135          397 AAS  399 (542)
Q Consensus       397 A~~  399 (542)
                      |++
T Consensus       233 a~~  235 (307)
T cd04852         233 AST  235 (307)
T ss_pred             ecc
Confidence            987

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
>KOG1153 consensus Subtilisin-related protease/Vacuolar protease B [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00262 subtilisin-like protease; Provisional Back     alignment and domain information
>cd07479 Peptidases_S8_SKI-1_like Peptidase S8 family domain in SKI-1-like proteins Back     alignment and domain information
>cd07491 Peptidases_S8_7 Peptidase S8 family domain, uncharacterized subfamily 7 Back     alignment and domain information
>cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases Back     alignment and domain information
>cd07483 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 family domain in Subtilisin_Novo-like proteins Back     alignment and domain information
>cd07485 Peptidases_S8_Fervidolysin_like Peptidase S8 family domain in Fervidolysin Back     alignment and domain information
>cd05561 Peptidases_S8_4 Peptidase S8 family domain, uncharacterized subfamily 4 Back     alignment and domain information
>cd07496 Peptidases_S8_13 Peptidase S8 family domain, uncharacterized subfamily 13 Back     alignment and domain information
>cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins Back     alignment and domain information
>cd07497 Peptidases_S8_14 Peptidase S8 family domain, uncharacterized subfamily 14 Back     alignment and domain information
>cd04077 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 family domain in ProteinaseK-like proteins Back     alignment and domain information
>cd07498 Peptidases_S8_15 Peptidase S8 family domain, uncharacterized subfamily 15 Back     alignment and domain information
>cd07481 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 family domain in BacillopeptidaseF-like proteins Back     alignment and domain information
>cd07475 Peptidases_S8_C5a_Peptidase Peptidase S8 family domain in Streptococcal C5a peptidases Back     alignment and domain information
>cd07489 Peptidases_S8_5 Peptidase S8 family domain, uncharacterized subfamily 5 Back     alignment and domain information
>cd07493 Peptidases_S8_9 Peptidase S8 family domain, uncharacterized subfamily 9 Back     alignment and domain information
>cd07477 Peptidases_S8_Subtilisin_subset Peptidase S8 family domain in Subtilisin proteins Back     alignment and domain information
>cd07487 Peptidases_S8_1 Peptidase S8 family domain, uncharacterized subfamily 1 Back     alignment and domain information
>cd07482 Peptidases_S8_Lantibiotic_specific_protease Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases Back     alignment and domain information
>cd07490 Peptidases_S8_6 Peptidase S8 family domain, uncharacterized subfamily 6 Back     alignment and domain information
>cd07473 Peptidases_S8_Subtilisin_like Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>cd04843 Peptidases_S8_11 Peptidase S8 family domain, uncharacterized subfamily 11 Back     alignment and domain information
>cd05562 Peptidases_S53_like Peptidase domain in the S53 family Back     alignment and domain information
>cd07480 Peptidases_S8_12 Peptidase S8 family domain, uncharacterized subfamily 12 Back     alignment and domain information
>cd04842 Peptidases_S8_Kp43_protease Peptidase S8 family domain in Kp43 proteases Back     alignment and domain information
>cd04857 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptidase S8 family domain in Tripeptidyl aminopeptidases_II Back     alignment and domain information
>cd07494 Peptidases_S8_10 Peptidase S8 family domain, uncharacterized subfamily 10 Back     alignment and domain information
>cd07474 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 family domain in Vpr-like proteins Back     alignment and domain information
>cd04059 Peptidases_S8_Protein_convertases_Kexins_Furin-like Peptidase S8 family domain in Protein convertases Back     alignment and domain information
>cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8 Back     alignment and domain information
>cd04847 Peptidases_S8_Subtilisin_like_2 Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>cd04848 Peptidases_S8_Autotransporter_serine_protease_like Peptidase S8 family domain in Autotransporter serine proteases Back     alignment and domain information
>cd07478 Peptidases_S8_CspA-like Peptidase S8 family domain in CspA-like proteins Back     alignment and domain information
>PF00082 Peptidase_S8: Subtilase family This is family S8 in the peptidase classification Back     alignment and domain information
>KOG4266 consensus Subtilisin kexin isozyme-1/site 1 protease, subtilase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00306 Peptidases_S8_S53 Peptidase domain in the S8 and S53 families Back     alignment and domain information
>KOG1114 consensus Tripeptidyl peptidase II [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd07488 Peptidases_S8_2 Peptidase S8 family domain, uncharacterized subfamily 2 Back     alignment and domain information
>KOG3526 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1404 AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02129 PA_hSPPL_like PA_hSPPL_like: Protease-associated domain containing human signal peptide peptidase-like (hSPPL)-like Back     alignment and domain information
>cd02120 PA_subtilisin_like PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases Back     alignment and domain information
>cd04817 PA_VapT_like PA_VapT_like: Protease-associated domain containing proteins like VapT from Vibrio metschnikovii strain RH530 Back     alignment and domain information
>cd02127 PA_hPAP21_like PA_hPAP21_like: Protease-associated domain containing proteins like the human secreted glycoprotein hPAP21 (human protease-associated domain-containing protein, 21kDa) Back     alignment and domain information
>cd04816 PA_SaNapH_like PA_SaNapH_like: Protease-associated domain containing proteins like Streptomyces anulatus N-acetylpuromycin N-acetylhydrolase (SaNapH) Back     alignment and domain information
>PF02225 PA: PA domain; InterPro: IPR003137 The PA (Protease associated) domain is found as an insert domain in diverse proteases, which include the MEROPS peptidase families A22B, M28, and S8A [] Back     alignment and domain information
>cd02122 PA_GRAIL_like PA _GRAIL_like: Protease-associated (PA) domain GRAIL-like Back     alignment and domain information
>cd04813 PA_1 PA_1: Protease-associated (PA) domain subgroup 1 Back     alignment and domain information
>cd02123 PA_C_RZF_like PA_C-RZF_ like: Protease-associated (PA) domain C_RZF-like Back     alignment and domain information
>cd04056 Peptidases_S53 Peptidase domain in the S53 family Back     alignment and domain information
>cd02126 PA_EDEM3_like PA_EDEM3_like: protease associated domain (PA) domain-containing EDEM3-like proteins Back     alignment and domain information
>cd02130 PA_ScAPY_like PA_ScAPY_like: Protease-associated domain containing proteins like Saccharomyces cerevisiae aminopeptidase Y (ScAPY) Back     alignment and domain information
>cd02125 PA_VSR PA_VSR: Protease-associated (PA) domain-containing plant vacuolar sorting receptor (VSR) Back     alignment and domain information
>cd00538 PA PA: Protease-associated (PA) domain Back     alignment and domain information
>cd02132 PA_GO-like PA_GO-like: Protease-associated domain containing proteins like Arabidopsis thaliana growth-on protein GRO10 Back     alignment and domain information
>cd02133 PA_C5a_like PA_C5a_like: Protease-associated domain containing proteins like Streptococcus pyogenes C5a peptidase Back     alignment and domain information
>cd02124 PA_PoS1_like PA_PoS1_like: Protease-associated (PA) domain PoS1-like Back     alignment and domain information
>cd04818 PA_subtilisin_1 PA_subtilisin_1: Protease-associated domain containing subtilisin-like proteases, subgroup 1 Back     alignment and domain information
>cd04819 PA_2 PA_2: Protease-associated (PA) domain subgroup 2 Back     alignment and domain information
>PF05922 Inhibitor_I9: Peptidase inhibitor I9; InterPro: IPR010259 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>cd02128 PA_TfR PA_TfR: Protease-associated domain containing proteins like transferrin receptor (TfR) Back     alignment and domain information
>cd04815 PA_M28_2 PA_M28_2: Protease-associated (PA) domain, peptidase family M28, subfamily-2 Back     alignment and domain information
>cd04822 PA_M28_1_3 PA_M28_1_3: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 3 Back     alignment and domain information
>cd04814 PA_M28_1 PA_M28_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1 Back     alignment and domain information
>cd02121 PA_GCPII_like PA_GCPII_like: Protease-associated domain containing protein, glutamate carboxypeptidase II (GCPII)-like Back     alignment and domain information
>cd04820 PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 1 Back     alignment and domain information
>cd02131 PA_hNAALADL2_like PA_hNAALADL2_like: Protease-associated domain containing proteins like human N-acetylated alpha-linked acidic dipeptidase-like 2 protein (hNAALADL2) Back     alignment and domain information
>KOG2442 consensus Uncharacterized conserved protein, contains PA domain [General function prediction only] Back     alignment and domain information
>KOG4628 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3525 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3920 consensus Uncharacterized conserved protein, contains PA domain [General function prediction only] Back     alignment and domain information
>COG4934 Predicted protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd04821 PA_M28_1_2 PA_M28_1_2: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 2 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query542
3i6s_A 649 Crystal Structure Of The Plant Subtilisin-Like Prot 3e-29
3vta_A 621 Crystal Structure Of Cucumisin, A Subtilisin-Like E 1e-26
>pdb|3I6S|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease Sbt3 Length = 649 Back     alignment and structure 
Iteration: 1

 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 123/266 (46%), Gaps = 17/266 (6%)
Query: 162 TTHTPQFLGL--PQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSH 219
           TTHT  FL L    G W   G     G+ V++  +D+GI P   SF DD       +P  
Sbjct: 1   TTHTSDFLKLNPSSGLWPASG----LGQDVIVAVLDSGIWPESASFQDDGMPE---IPKR 53
Query: 220 FSGICEVTRDFPSGSCNRKLIGARHFAASAITRG-IFNSSQDYASPFDGDGHGSHTASVA 278
           + GIC+    F +  CNRKLIGA +F    +      N + + A   D DGHG+H AS+ 
Sbjct: 54  WKGICKPGTQFNASMCNRKLIGANYFNKGILANDPTVNITMNSAR--DTDGHGTHCASIT 111
Query: 279 AGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFXXXXXXXXXXXXXXXXXXXS 338
           AGN    V   G+  G A G+APR+ +AVYK  +   G F                   S
Sbjct: 112 AGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNE-GTFTSDLIAAMDQAVADGVDMIS 170
Query: 339 LSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAA 398
           +S      P     + + I +A   A   G+ V  +AGN GP   S+++ SPWI  V + 
Sbjct: 171 ISYGYRFIP----LYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASG 226
Query: 399 SHDRIYTNSIILGNSLTISGVGLAPG 424
             DR +  ++ LGN L I G  L P 
Sbjct: 227 HTDRTFAGTLTLGNGLKIRGWSLFPA 252
>pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like Endoprotease From Cucumis Melo L Length = 621 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query542
3vta_A 621 Cucumisin; subtilisin-like fold, serine protease, 9e-94
3i6s_A 649 Subtilisin-like protease; PA-domain, FN3-domain, h 2e-91
1xf1_A 926 C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St 1e-61
3afg_A539 Subtilisin-like serine protease; propeptide, therm 5e-27
2z2z_A395 TK-subtilisin precursor; thermococcus kodakaraensi 1e-25
1to2_E281 Subtilisin BPN'; serine protease, hydrolase; HET: 2e-25
1r0r_E274 Subtilisin carlsberg; high resolution, serine prot 2e-25
3t41_A471 Epidermin leader peptide processing serine protea; 2e-24
4aks_A360 PATG, thiazoline oxidase/subtilisin-like protease; 3e-24
2x8j_A327 Intracellular subtilisin protease; hydrolase, seri 4e-24
2ixt_A310 36KDA protease; serine protease, sphericase, subti 5e-24
1thm_A279 Thermitase; hydrolase(serine protease); 1.37A {The 5e-24
1dbi_A280 AK.1 serine protease; hydrolase; 1.80A {Bacillus S 7e-24
1gci_A269 Subtilisin; hydrolase, serine protease; 0.78A {Bac 1e-22
2p4e_P 692 Proprotein convertase subtilisin/kexin type 9; pro 1e-22
2z30_A320 TK-subtilisin; thermococcus kodakaraensis, hydrola 8e-21
1y9z_A 441 Alkaline serine protease; subtilisin-like alpha/be 4e-20
3lpc_A340 APRB2; protease, subtilase, virulence factor, hydr 4e-20
1wmd_A434 Protease; alpha-beta hydrolase fold, jelly-roll be 6e-20
1r6v_A 671 Subtilisin-like serine protease; sandwich domain, 8e-20
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 1e-19
2iy9_A347 SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col 8e-18
2b6n_A278 Proteinase K; S binding, substrate specificity, pr 1e-17
1sh7_A284 Extracellular subtilisin-like serine proteinase; c 4e-17
4dzt_A276 Aqualysin-1, aqualysin-I; serine protease, calcium 7e-17
2qtw_B 546 Proprotein convertase subtilisin/kexin type 9; cor 8e-17
3f7m_A279 Alkaline serine protease VER112; verticillium psal 2e-15
2pwa_A279 Proteinase K; structure, alanine boronic acid, hyd 7e-15
2id4_A 503 Kexin; KEX2, kexin, furin, proprotein, prohormone, 2e-12
2oxa_A 600 Extracellular serine protease; kexin, hydrolase; 1 3e-12
1p8j_A 471 Furin precursor; prohormone convertase, SPC1, PACE 7e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} Length = 621 Back     alignment and structure
 Score =  298 bits (763), Expect = 9e-94
 Identities = 109/347 (31%), Positives = 158/347 (45%), Gaps = 26/347 (7%)

Query: 162 TTHTPQFLGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFS 221
           TT +  FLG P     +          +V+G +DTGI P  PSF D+      P P  + 
Sbjct: 1   TTRSWDFLGFPLTVPRRSQ----VESNIVVGVLDTGIWPESPSFDDE---GFSPPPPKWK 53

Query: 222 GICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGN 281
           G CE + +F    CNRK+IGAR +       G   S  D   P D +GHG+HTAS AAG 
Sbjct: 54  GTCETSNNFR---CNRKIIGARSYHI-----GRPISPGDVNGPRDTNGHGTHTASTAAGG 105

Query: 282 HGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSI 341
                 + G   G A G  P + IA YK  +   G    D++AA D A  DGVDIISLS+
Sbjct: 106 LVSQANLYGLGLGTARGGVPLARIAAYKVCWND-GCSDTDILAAYDDAIADGVDIISLSV 164

Query: 342 TPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHD 401
                      F + I +    A + GI    +AGN GP+  + +S SPW+ +V A++ D
Sbjct: 165 GG---ANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMD 221

Query: 402 RIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQ 461
           R +   + +GN  +  GV +    ++ Y L+S     N     +   +   C D S  N 
Sbjct: 222 RKFVTQVQIGNGQSFQGVSINTFDNQYYPLVSGRDIPNTGFDKSTSRF---CTDKS-VNP 277

Query: 462 DLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVI 508
           +L++G +++C  S          K     A  L  +    Y D + +
Sbjct: 278 NLLKGKIVVCEASFGPH---EFFKSLDGAAGVLMTSNTRDYADSYPL 321
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* Length = 649 Back     alignment and structure
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* Length = 926 Back     alignment and structure
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Length = 539 Back     alignment and structure
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Length = 395 Back     alignment and structure
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Length = 281 Back     alignment and structure
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Length = 274 Back     alignment and structure
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Length = 471 Back     alignment and structure
>4aks_A PATG, thiazoline oxidase/subtilisin-like protease; hydrolase, patellamide; 2.19A {Prochloron didemni} PDB: 4akt_A Length = 360 Back     alignment and structure
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Length = 327 Back     alignment and structure
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Length = 310 Back     alignment and structure
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Length = 279 Back     alignment and structure
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Length = 280 Back     alignment and structure
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Length = 269 Back     alignment and structure
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Length = 692 Back     alignment and structure
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Length = 320 Back     alignment and structure
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Length = 441 Back     alignment and structure
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Length = 340 Back     alignment and structure
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Length = 434 Back     alignment and structure
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Length = 671 Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Length = 1354 Back     alignment and structure
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Length = 347 Back     alignment and structure
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Length = 278 Back     alignment and structure
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Length = 284 Back     alignment and structure
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Length = 276 Back     alignment and structure
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Length = 546 Back     alignment and structure
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} PDB: 3f7o_A Length = 279 Back     alignment and structure
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Length = 279 Back     alignment and structure
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Length = 503 Back     alignment and structure
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Length = 471 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query542
3i6s_A 649 Subtilisin-like protease; PA-domain, FN3-domain, h 100.0
3vta_A 621 Cucumisin; subtilisin-like fold, serine protease, 100.0
1xf1_A 926 C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St 100.0
2p4e_P 692 Proprotein convertase subtilisin/kexin type 9; pro 100.0
1y9z_A441 Alkaline serine protease; subtilisin-like alpha/be 100.0
2z2z_A395 TK-subtilisin precursor; thermococcus kodakaraensi 100.0
3afg_A539 Subtilisin-like serine protease; propeptide, therm 100.0
3t41_A471 Epidermin leader peptide processing serine protea; 100.0
1r6v_A 671 Subtilisin-like serine protease; sandwich domain, 100.0
1dbi_A280 AK.1 serine protease; hydrolase; 1.80A {Bacillus S 100.0
1thm_A279 Thermitase; hydrolase(serine protease); 1.37A {The 100.0
1r0r_E274 Subtilisin carlsberg; high resolution, serine prot 100.0
1gci_A269 Subtilisin; hydrolase, serine protease; 0.78A {Bac 100.0
2x8j_A327 Intracellular subtilisin protease; hydrolase, seri 100.0
1to2_E281 Subtilisin BPN'; serine protease, hydrolase; HET: 100.0
1sh7_A284 Extracellular subtilisin-like serine proteinase; c 100.0
2b6n_A278 Proteinase K; S binding, substrate specificity, pr 100.0
2z30_A320 TK-subtilisin; thermococcus kodakaraensis, hydrola 100.0
3zxy_A282 Subtilisin-like protein; hydrolase; 1.58A {Prochlo 100.0
4dzt_A276 Aqualysin-1, aqualysin-I; serine protease, calcium 100.0
4h6x_A357 Thiazoline oxidase/subtilisin-like protease; hydro 99.98
2ixt_A310 36KDA protease; serine protease, sphericase, subti 99.98
2pwa_A279 Proteinase K; structure, alanine boronic acid, hyd 99.98
3lpc_A340 APRB2; protease, subtilase, virulence factor, hydr 99.97
3f7m_A279 Alkaline serine protease VER112; verticillium psal 99.97
2iy9_A347 SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col 99.97
4h6w_A306 N-terminal cyanobactin protease; hydrolase; 2.45A 99.97
2qtw_B 546 Proprotein convertase subtilisin/kexin type 9; cor 99.97
1p8j_A 471 Furin precursor; prohormone convertase, SPC1, PACE 99.96
2id4_A 503 Kexin; KEX2, kexin, furin, proprotein, prohormone, 99.96
1wmd_A434 Protease; alpha-beta hydrolase fold, jelly-roll be 99.96
2oxa_A 600 Extracellular serine protease; kexin, hydrolase; 1 99.96
3hjr_A 600 Extracellular serine protease; kexin, hydrolase; 1 99.95
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 99.91
1t1e_A552 Kumamolisin; proenzyme, prosubtilase, activation m 99.5
1ga6_A372 Serine-carboxyl proteinase; serine-carboxyl protei 99.19
3icu_A194 E3 ubiquitin-protein ligase RNF128; E3 ligase, ene 99.18
3cnq_P80 Subtilisin BPN'; uncleaved, proenzyme, substrate c 98.77
2w2n_P114 Proprotein convertase subtilisin/kexin type 9; hyd 98.7
2qtw_A124 Proprotein convertase subtilisin/kexin type 9 Pro; 98.53
1v5i_B76 POIA1, IA-1=serine proteinase inhibitor; protease- 98.43
2ek8_A 421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 98.37
3fed_A 707 Glutamate carboxypeptidase III; metallopeptidase, 98.12
3kas_A 640 Transferrin receptor protein 1; transferrin recept 98.01
3iib_A 444 Peptidase M28; YP_926796.1, structural genomics, J 97.73
3edy_A544 Tripeptidyl-peptidase 1; protease, TPP1, sedolisin 97.58
2z30_B65 TK-subtilisin; thermococcus kodakaraensis, hydrola 97.02
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 91.59
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* Back     alignment and structure
Probab=100.00  E-value=2.1e-54  Score=477.15  Aligned_cols=339  Identities=32%  Similarity=0.529  Sum_probs=292.6

Q ss_pred             CCCCCccCCCC--cchhcccCCCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCcee
Q 009135          162 TTHTPQFLGLP--QGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKL  239 (542)
Q Consensus       162 ~~~s~~~~gl~--~~~w~~~~~~~~~G~Gv~VaViDtGvd~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki  239 (542)
                      ++++++++||.  ...|..    +++|+||+|||||||||++||+|.+...   .++|..|++.|+.+.+|....||+|+
T Consensus         1 Tt~s~~flgl~~~~~~w~~----~~~G~gViVaViDTGId~~Hp~f~d~g~---~p~p~~wkg~c~~g~~f~~~~cN~ki   73 (649)
T 3i6s_A            1 TTHTSDFLKLNPSSGLWPA----SGLGQDVIVAVLDSGIWPESASFQDDGM---PEIPKRWKGICKPGTQFNASMCNRKL   73 (649)
T ss_dssp             CCSHHHHTTCCSSSSHHHH----HGGGTTCEEEEEESCBCTTSGGGCCTTC---CCCCTTCCCCBCCBTTBCTTSCCSSE
T ss_pred             CCCChHHcCCCCchhhHhc----cCCCCCCEEEEEccCCCCCChhhccCCC---CCCccccccccccCccccccccccce
Confidence            35778888886  358988    7899999999999999999999999865   78899999999999999999999999


Q ss_pred             eeeeeccccccccCccCCCCCCCCCCCCCCChhhhhhhhhccCCCCcccccccCCCcccccCCCeEEEEEeccCCCCCCH
Q 009135          240 IGARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFA  319 (542)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~~~~  319 (542)
                      +++++|.++..... .+...+..++.|..||||||||||+|+..++.+..|...+.+.||||+|+|+++|+++..+ +..
T Consensus        74 ig~~~f~~~~~~~~-~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~  151 (649)
T 3i6s_A           74 IGANYFNKGILAND-PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEG-TFT  151 (649)
T ss_dssp             EEEEECCHHHHHHC-TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTE-ECH
T ss_pred             eeeEeccCcccccc-cccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCC-CCH
Confidence            99999997765433 4445566778899999999999999998776666676667789999999999999999864 889


Q ss_pred             HHHHHHHHHHhhCCCcEEEeccCCCCCCCCCCCcchHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCcEEEEeccc
Q 009135          320 ADVVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAAS  399 (542)
Q Consensus       320 ~~i~~ai~~a~~~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~GilvV~AAGN~G~~~~~~~~~~p~vitVgA~~  399 (542)
                      +++++||+||+++|+||||||||....    ..+.+.++.++++|.++||+||+||||+|+...++++.+||+|+|||++
T Consensus       152 ~~i~~Ai~~A~~~gvdVIn~SlG~~~~----~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst  227 (649)
T 3i6s_A          152 SDLIAAMDQAVADGVDMISISYGYRFI----PLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGH  227 (649)
T ss_dssp             HHHHHHHHHHHHTTCSEEEECCCCCSC----CGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEE
T ss_pred             HHHHHHHHHHHHcCCCEEEeCCccCCc----ccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeee
Confidence            999999999999999999999998632    4556789999999999999999999999999999999999999999999


Q ss_pred             cCCcccceeEeCCCeEEEeeecCCCC--CCceeEEeeccccCCCccccCCcCcccCCCCCCCCccCc--cccEEEEeecc
Q 009135          400 HDRIYTNSIILGNSLTISGVGLAPGT--DKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLV--QGNLLICSYSI  475 (542)
Q Consensus       400 ~~~~~~~~s~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~--~Gkivl~~r~~  475 (542)
                      .++.+..+..+|++..+.|.++++..  ...+|+++..             ....|. +..+++..+  +||||||+|  
T Consensus       228 ~dr~f~~~~~lgng~~~~g~sl~~~~~~~~~~plv~~~-------------~~~~C~-~~~l~~~~vdl~GkIvlc~~--  291 (649)
T 3i6s_A          228 TDRTFAGTLTLGNGLKIRGWSLFPARAFVRDSPVIYNK-------------TLSDCS-SEELLSQVENPENTIVICDD--  291 (649)
T ss_dssp             CSCEEEEEEEETTSCEEEEECCCSSCBCEEEEEEECCT-------------TTTTCC-CHHHHTTSSSGGGCEEEECC--
T ss_pred             cccceeeEEEeCCCcEEeeeecccCcccCcceeeEecc-------------cccccc-cccccccccccCCcEEEEeC--
Confidence            99999999999999999999988775  4557777643             235786 445666667  999999999  


Q ss_pred             ccccCcccHHHHHHHHHhCCceEEEEecccCccccccCCCCCCccEEEeChhhHHHHHHHhh
Q 009135          476 RFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKVQFLCL  537 (542)
Q Consensus       476 ~~~~g~~~~~~k~~~a~~aGa~gvii~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~~~~  537 (542)
                          |.|.+.+|.++++++||.|||+||+.    .......+.+|+++|++++|++|+..+.
T Consensus       292 ----g~~~~~~k~~~~~~~Ga~g~i~~n~~----~~~~~~~~~~P~~~v~~~~g~~i~~yi~  345 (649)
T 3i6s_A          292 ----NGDFSDQMRIITRARLKAAIFISEDP----GVFRSATFPNPGVVVNKKEGKQVINYVK  345 (649)
T ss_dssp             ----CSCHHHHHHHHHHHTCSEEEEECCCG----GGGGCCCCCSCEEEECHHHHHHHHHHHH
T ss_pred             ----CCccHHHHHHHHHhcCceEEEEecCc----cccccccCcCCEEEEcHHHHHHHHHHHh
Confidence                78999999999999999999999986    2233456789999999999999988654
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} Back     alignment and structure
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* Back     alignment and structure
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Back     alignment and structure
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Back     alignment and structure
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Back     alignment and structure
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Back     alignment and structure
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Back     alignment and structure
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Back     alignment and structure
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Back     alignment and structure
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Back     alignment and structure
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Back     alignment and structure
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Back     alignment and structure
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Back     alignment and structure
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Back     alignment and structure
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Back     alignment and structure
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Back     alignment and structure
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Back     alignment and structure
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A Back     alignment and structure
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Back     alignment and structure
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A Back     alignment and structure
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Back     alignment and structure
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Back     alignment and structure
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Back     alignment and structure
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A Back     alignment and structure
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Back     alignment and structure
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596} Back     alignment and structure
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Back     alignment and structure
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Back     alignment and structure
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Back     alignment and structure
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Back     alignment and structure
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Back     alignment and structure
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A Back     alignment and structure
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A* Back     alignment and structure
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens} Back     alignment and structure
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B Back     alignment and structure
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P Back     alignment and structure
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P Back     alignment and structure
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A* Back     alignment and structure
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 542
d1v6ca_ 435 c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseud 9e-13
d1dbia_280 c.41.1.1 (A:) Thermostable serine protease {Bacill 1e-12
d1r6va_ 671 c.41.1.1 (A:) Fervidolysin {Fervidobacterium penni 1e-11
d1ga6a_369 c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pse 2e-11
d1r0re_274 c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carls 1e-09
d1t1ga_357 c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bac 2e-09
d1to2e_281 c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefacie 3e-09
d1thma_279 c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgar 9e-08
d1gcia_269 c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 4e-07
d2id4a2339 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Bak 1e-06
d2ixta1309 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus 2e-05
d2pwaa1279 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirach 2e-05
d1wmda2318 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, 4e-05
d1p8ja2334 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mou 2e-04
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} Length = 435 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Alkaline serine protease Apa1
species: Pseudoalteromonas sp. AS-11 [TaxId: 247492]

 Score = 67.8 bits (164), Expect = 9e-13
 Identities = 36/238 (15%), Positives = 77/238 (32%), Gaps = 59/238 (24%)

Query: 182 YETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIG 241
            ++      I  ID+G D +H     +                                 
Sbjct: 17  SDSQAGNRTICIIDSGYDRSHNDLNANN-------------------------------- 44

Query: 242 ARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAP 301
                   +T    + + ++  P + + HG+H A   A            +     G+ P
Sbjct: 45  --------VTGTNNSGTGNWYQPGNNNAHGTHVAGTIAAI---------ANNEGVVGVMP 87

Query: 302 RSHIAVY--KALYKSFGGFAADVVAAIDQAAQDG-VDIISLSITPNRRPPGIATFFNPID 358
             +  ++  K   ++  G+++ +VAAID     G  +++++S+  +          N   
Sbjct: 88  NQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTMSLGGSGSTTTERNALNTHY 147

Query: 359 MALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRIYTNSIILGNSLTI 416
                    G+ ++ AAGN G S  S  +    + +V A   +  +       + + I
Sbjct: 148 N-------NGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEI 198
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Length = 280 Back     information, alignment and structure
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Length = 671 Back     information, alignment and structure
>d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} Length = 369 Back     information, alignment and structure
>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} Length = 274 Back     information, alignment and structure
>d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} Length = 357 Back     information, alignment and structure
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Length = 281 Back     information, alignment and structure
>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} Length = 279 Back     information, alignment and structure
>d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} Length = 269 Back     information, alignment and structure
>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 339 Back     information, alignment and structure
>d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} Length = 309 Back     information, alignment and structure
>d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} Length = 279 Back     information, alignment and structure
>d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} Length = 318 Back     information, alignment and structure
>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 334 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query542
d1r6va_ 671 Fervidolysin {Fervidobacterium pennivorans [TaxId: 100.0
d1dbia_280 Thermostable serine protease {Bacillus sp., AK.1 [ 100.0
d1v6ca_435 Alkaline serine protease Apa1 {Pseudoalteromonas s 100.0
d1thma_279 Thermitase {Thermoactinomyces vulgaris [TaxId: 202 99.97
d1to2e_281 Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' 99.97
d1gcia_269 Subtilisin {Bacillus lentus [TaxId: 1467]} 99.97
d1r0re_274 Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1 99.97
d2pwaa1279 Proteinase K {Fungus (Tritirachium album), strain 99.95
d2ixta1309 Sphericase {Bacillus sphaericus [TaxId: 1421]} 99.92
d1p8ja2334 Furin, N-terminal domain {Mouse (Mus musculus) [Ta 99.89
d1wmda2318 Alkaline serine protease kp-43, N-terminal domain 99.88
d2id4a2339 Kexin, N-terminal domain {Baker's yeast (Saccharom 99.88
d1t1ga_357 Serine-carboxyl proteinase, SCP {Bacillus novosp. 99.68
d1ga6a_369 Serine-carboxyl proteinase, SCP {Pseudomonas sp., 99.67
d1scjb_71 Subtilisin prosegment {Bacillus subtilis [TaxId: 1 98.58
d1v5ib172 Proteinase A inhibitor 1, POIA1 {Oyster mushroom ( 98.54
d1de4c2193 Transferrin receptor ectodomain, apical domain {Hu 98.43
d3bi1a2233 Glutamate carboxypeptidase II {Human (Homo sapiens 98.13
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Fervidolysin
species: Fervidobacterium pennivorans [TaxId: 93466]

Probab=100.00  E-value=2.1e-34  Score=318.51  Aligned_cols=245  Identities=18%  Similarity=0.196  Sum_probs=178.0

Q ss_pred             CeeEEEEeceeeeeEEEEeCHHHH----HHH--hcCCCcEEEEecccccccC----CCCCc-------------------
Q 009135          117 KYLKLYSYHYLINGFSVFVTPQQA----EKL--SRRREVANVVSDFSVRTAT----THTPQ-------------------  167 (542)
Q Consensus       117 ~~~~~~~~~~~~~g~~v~~~~~~l----~~L--~~~p~V~~v~~~~~~~~~~----~~s~~-------------------  167 (542)
                      +.+++.++. .++.+.++++...+    +.+  ..+|+|++|||+...+...    ...+.                   
T Consensus        52 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~vep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (671)
T d1r6va_          52 NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEE  130 (671)
T ss_dssp             TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSST
T ss_pred             CCEEEEEec-ccceEEEEcCchhHHHHHHHHHHhcCCCceEECcceeEeeccccccCCCccccccccccccccccCcCcc
Confidence            345555654 45667777664332    233  3579999999986543211    00000                   


Q ss_pred             ----cCCC-----CcchhcccCCCCCCCCCcEEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCce
Q 009135          168 ----FLGL-----PQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRK  238 (542)
Q Consensus       168 ----~~gl-----~~~~w~~~~~~~~~G~Gv~VaViDtGvd~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~k  238 (542)
                          .|++     ....|..     ++|+||+|||||||||++||+|.++..                            
T Consensus       131 ~~~~~w~l~~i~~~~a~~~~-----~tG~gV~VaViDtGvd~~Hpdl~~~~~----------------------------  177 (671)
T d1r6va_         131 LSNELWGLEAIGVTQQLWEE-----ASGTNIIVAVVDTGVDGTHPDLEGQVI----------------------------  177 (671)
T ss_dssp             TGGGCHHHHHTTCCHHHHHH-----CSCTTCEEEEEESCCBTTSGGGTTTBC----------------------------
T ss_pred             ccccCcChhhcCccHHHHhc-----CCCCCCEEEEEcCCcCCCChhhcCCcc----------------------------
Confidence                1111     1223553     799999999999999999999987642                            


Q ss_pred             eeeeeeccccccccCccCCCCCCCCCCCCCCChhhhhhhhhccCCCCcccccccCCCcccccCCCeEEEEEeccC-----
Q 009135          239 LIGARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYK-----  313 (542)
Q Consensus       239 i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~-----  313 (542)
                        .++++..+..       .....++.|..+|||||||||+|..+.         .++.||||+|+|+++|++++     
T Consensus       178 --~~~~~~~~~~-------~~~~~~~~d~~gHGT~VAGiiaa~~~~---------~g~~GvAp~a~l~~~rv~~~~~~~~  239 (671)
T d1r6va_         178 --AGYRPAFDEE-------LPAGTDSSYGGSAGTHVAGTIAAKKDG---------KGIVGVAPGAKIMPIVIFDDPALVG  239 (671)
T ss_dssp             --CEEEGGGTEE-------ECTTCBCCTTCSHHHHHHHHHHCCCSS---------SSCCCSCTTSEEEEEESBCCHHHHC
T ss_pred             --cCccccccCC-------CCCCCcCcccCCCCccccceeeeeccc---------cceeeecCcceEEEEEecccccccC
Confidence              1122211100       001134567889999999999997542         34789999999999999964     


Q ss_pred             -CCCCCHHHHHHHHHHHhhCCCcEEEeccCCCCCCCCCCCcchHHHHHHHHHHhCCcEEEEecCCCCCCC-CCCCCCCCc
Q 009135          314 -SFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSP-KSMSSFSPW  391 (542)
Q Consensus       314 -~~~~~~~~i~~ai~~a~~~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~GilvV~AAGN~G~~~-~~~~~~~p~  391 (542)
                       .+......++++|+||+++|++|||||||+...       ...++.+++++.++|+++|+||||++.+. ..+|+..|+
T Consensus       240 ~~g~~~~~~i~~ai~~a~~~g~~Vin~S~g~~~~-------~~~~~~ai~~a~~~gv~vV~aAGN~~~~~~~~~Pa~~~~  312 (671)
T d1r6va_         240 GNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWGY-------SYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPG  312 (671)
T ss_dssp             TTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSCC-------CHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTT
T ss_pred             CCCcccHHHHHHHHHHHHhCCCcEEecccccccC-------ChHHHHHHHHHHhccCcEEEEEecCCCCccccCCccCCc
Confidence             234567889999999999999999999987432       36788999999999999999999999764 567888899


Q ss_pred             EEEEeccccCC---cccceeEeCCCeEEEeee
Q 009135          392 IFTVGAASHDR---IYTNSIILGNSLTISGVG  420 (542)
Q Consensus       392 vitVgA~~~~~---~~~~~s~~G~~~~~~~~~  420 (542)
                      +|+|||++.++   .++.||++|+++++.+||
T Consensus       313 vi~Vga~~~~~~~~~~a~fS~~g~~~dv~APG  344 (671)
T d1r6va_         313 VIQVAALDYYGGTFRVAGFSSRSDGVSVGAPG  344 (671)
T ss_dssp             CEEEEEEEEETTEEEECSSSCCCTTEEEEEEC
T ss_pred             eEEEEEecCCCCcceeeeccCCCCCceEEecC
Confidence            99999998766   578999999999997665
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Back     information, alignment and structure
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} Back     information, alignment and structure
>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} Back     information, alignment and structure
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Back     information, alignment and structure
>d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} Back     information, alignment and structure
>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} Back     information, alignment and structure
>d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} Back     information, alignment and structure
>d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} Back     information, alignment and structure
>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} Back     information, alignment and structure
>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} Back     information, alignment and structure
>d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} Back     information, alignment and structure
>d1scjb_ d.58.3.2 (B:) Subtilisin prosegment {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1v5ib1 d.58.3.2 (B:1-72) Proteinase A inhibitor 1, POIA1 {Oyster mushroom (Pleurotus ostreatus) [TaxId: 5322]} Back     information, alignment and structure
>d1de4c2 c.8.4.1 (C:190-382) Transferrin receptor ectodomain, apical domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3bi1a2 c.8.4.1 (A:118-350) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure