Citrus Sinensis ID: 009149

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540--
MPLNLAVAASICSLFCSLFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCGKAAGRHTRPL
cccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEccccccEEEEEEcccccccEEEEEEccEEEEEEEEccccccEEEEccccccccccccccccccccccccccEEEEEEEcccEEEEEEcccccccccccccccEEEEccccccccccccccEEEEEEcccccccHHHHHHHHccccccccccEEEEccccccEEEEEEcccEEEEEEEEccccccEEEEEcccEEEEEEEccccccEEEEcEEEEccccEEEEEEEccccccccEEEEEcccccccccEEEEEEcccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccEEEEcccccccccEEEEEEcccccccccccHHHHHHcccccccccccccccccccccccccEEEEEccccEEEEEEEccccccccccccccccEEEEEccccccccccccccccccccccEEEEccccEEEEEEEcccccccHHHHcccHHHHcccEEEEEEEcccccccccccccccHHHHHHHcccccccc
ccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEccccccccccEEEEEcccccccEEEEEcccEEEEEEEEcccccEEEEEcHHHHcccccccccccccccccccccEEEEEEEEcccEEEEHHHHHHHHHHHcccEEEEEccccccccccccccccEEEEEEcHccccHHHHHHHHHcccccccccEEEEEccccccEEEEccccEEEEEEEEcccccEEEEEEccEcEEEEEEccEEEEEEEEcEEEEccccEEEEEEEccccccccEEEEEEcccccccEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccEEEEEEEcccEEccccccccccEEEEEEccEEEcccccHHHHHHHcccccEEEcccccccccccccccccEEEEEEcccEEEEEEEccccEEEcEEEcccEEEEEEcccccccccccccccccccccccccEcccccEEEEEEEcccccHHHHEHHHHHHHHHcHEEEEEEEcccccccccccccccccccccccccccccc
MPLNLAVAASICSLFCSLFAivsaedpyrffnwnvtygdiyplgvrqrgilinwqfpgpdihsvtndnlIINVFNsldepfllswngiqnrrnsfedgvygttcpippgknftYILQVKDQigsfyyfpslafhkaaggfggirilsrpripvpfpdpagdytVLIGDWYKSNHTDLRahldkgkklplpdgilingrgsgaafnveqgkTYRLRISnvglqnslnfRIQNHKMKLVEvegthtlqttyssldvhvgQSYSVLVtadqpardYYIVVSSRFTSTVLTTTGilhysnsagpvsgpipggptvqiDWSLNQARSIRsnltasgprpnpqgsyhyglinttktirlsssagqvngkqryainsvsfipadtplkladyfkiggvfrigsisdnptgggiyqdtavmgaDYRAFIEIVFQNDEDIIQSYHLNGYQFWVVgmdggqwtsasrnqynLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTAstslrdeypipknarlcgkaagrhtrpl
MPLNLAVAASICSLFCSLFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSnltasgprpnpqGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFrigsisdnptGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTAStslrdeypipknarlcgkaagrhtrpl
MPLNLAVAASICSLFCSLFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCGKAAGRHTRPL
***NLAVAASICSLFCSLFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNS******************************************YHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIP*****************
******V*ASICSLFCSLFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGP**GPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTA*********IPKNARLCGKAAG******
MPLNLAVAASICSLFCSLFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCG**********
*PLNLAVAASICSLFCSLFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCGKAA*******
iiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPLNLAVAASICSLFCSLFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCGKAAGRHTRPL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query542 2.2.26 [Sep-21-2011]
Q00624555 L-ascorbate oxidase homol N/A no 0.935 0.913 0.569 1e-164
P29162554 L-ascorbate oxidase homol N/A no 0.972 0.951 0.525 1e-160
Q9SU40587 Monocopper oxidase-like p no no 0.955 0.882 0.509 1e-146
Q9FHN6592 Monocopper oxidase-like p no no 0.948 0.868 0.490 1e-144
Q8VXX5589 Monocopper oxidase-like p no no 0.979 0.901 0.490 1e-141
Q0IQU1564 Laccase-22 OS=Oryza sativ no no 0.939 0.902 0.277 2e-46
O80434558 Laccase-4 OS=Arabidopsis no no 0.950 0.922 0.268 4e-45
P24792579 L-ascorbate oxidase OS=Cu N/A no 0.909 0.851 0.277 3e-43
Q8RYM9562 Laccase-2 OS=Oryza sativa no no 0.900 0.868 0.282 8e-43
Q1PDH6566 Laccase-16 OS=Arabidopsis no no 0.887 0.849 0.286 1e-42
>sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1 Back     alignment and function desciption
 Score =  578 bits (1490), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 295/518 (56%), Positives = 375/518 (72%), Gaps = 11/518 (2%)

Query: 25  EDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLS 84
           EDPY    WNVTYG   PLGV Q+ ILIN QFPGP+I+S +N+N+IINVFN+LDEPFLL+
Sbjct: 24  EDPYFHHVWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNVIINVFNNLDEPFLLT 83

Query: 85  WNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIR 144
           WNGIQ+R+N ++DG  GT CPI PG N+TY  Q KDQIGS++Y+P+   H+AAGG+GG+R
Sbjct: 84  WNGIQHRKNCWQDGTPGTMCPIMPGTNYTYHFQPKDQIGSYFYYPTTGMHRAAGGYGGLR 143

Query: 145 ILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGR-----G 199
           + SR  IPVP+ DP  DYTVLIGDWY  +HT L+  LD G+ +  PDGI+ING+     G
Sbjct: 144 VNSRLLIPVPYADPEDDYTVLIGDWYTKSHTQLKKFLDGGRTIGRPDGIVINGKSGKGDG 203

Query: 200 SGAA-FNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQ 258
           S A  F ++ GKTYR+RI NVG++ S+NFRIQNHKMKLVE+EG+H LQ  Y SLDVHVGQ
Sbjct: 204 SDAPLFTLKPGKTYRVRICNVGVKTSINFRIQNHKMKLVEMEGSHVLQNDYDSLDVHVGQ 263

Query: 259 SYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLN 318
            +  +VTA+Q  +DYY+V SSRF  TV+TTTG+L Y    GP S  +P GP V   WSLN
Sbjct: 264 CFGTIVTANQEPKDYYMVASSRFLKTVITTTGLLRYEGGKGPASSQLPAGP-VGWAWSLN 322

Query: 319 QARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADT 378
           Q RS R NLTAS  RPNPQGSYHYG IN T+TI+L ++ G+V+GK R+A+N VS    +T
Sbjct: 323 QFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGKVDGKLRFALNGVSHTEPET 382

Query: 379 PLKLADYFKIGG-VFRIGSISDNPTGGGIYQ---DTAVMGADYRAFIEIVFQNDEDIIQS 434
           PLKLA+YF I   VF+  +I+D+PT   I     +  V+   +R F+E+VF+N E  +QS
Sbjct: 383 PLKLAEYFGISDKVFKYDTITDDPTPEQIKNIKIEPNVLNITHRTFVEVVFENHEKSVQS 442

Query: 435 YHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLR 494
           +HL+GY F+ V ++ G WT   R  YNL DAV+R TVQVYPK W+AI +  DN GMWN+R
Sbjct: 443 WHLDGYSFFSVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVR 502

Query: 495 SESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCG 532
           SE+  R+YLGQQ Y  V +   SLRDEY +P+ +  CG
Sbjct: 503 SENTERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCG 540
Probable oxidase that may be involved in pollen tube growth.
Brassica napus (taxid: 3708)
EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: -
>sp|P29162|ASOL_TOBAC L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|Q9SU40|SKU5_ARATH Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1 Back     alignment and function description
>sp|Q9FHN6|SKS2_ARATH Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1 Back     alignment and function description
>sp|Q8VXX5|SKS1_ARATH Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1 Back     alignment and function description
>sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 Back     alignment and function description
>sp|O80434|LAC4_ARATH Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2 Back     alignment and function description
>sp|P24792|ASO_CUCMA L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2 Back     alignment and function description
>sp|Q8RYM9|LAC2_ORYSJ Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1 Back     alignment and function description
>sp|Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query542
255539130546 multicopper oxidase, putative [Ricinus c 1.0 0.992 0.855 0.0
217074450544 unknown [Medicago truncatula] 1.0 0.996 0.840 0.0
388494110544 unknown [Medicago truncatula] 1.0 0.996 0.838 0.0
297842363541 hypothetical protein ARALYDRAFT_895494 [ 0.966 0.968 0.864 0.0
356508933547 PREDICTED: L-ascorbate oxidase homolog [ 1.0 0.990 0.862 0.0
356517572547 PREDICTED: L-ascorbate oxidase homolog [ 1.0 0.990 0.855 0.0
15222981541 SKU5 similar 5 protein [Arabidopsis thal 0.987 0.988 0.837 0.0
15982771541 At1g76160/T23E18_10 [Arabidopsis thalian 0.987 0.988 0.836 0.0
224085984548 predicted protein [Populus trichocarpa] 1.0 0.989 0.822 0.0
22531132541 pectinesterase, putative [Arabidopsis th 0.987 0.988 0.836 0.0
>gi|255539130|ref|XP_002510630.1| multicopper oxidase, putative [Ricinus communis] gi|223551331|gb|EEF52817.1| multicopper oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  968 bits (2503), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/546 (85%), Positives = 501/546 (91%), Gaps = 4/546 (0%)

Query: 1   MPLNLAVAASICSLFC---SLFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFP 57
           MPL+LA   +IC+LFC   S FAIV AEDPYRFFNWNVTYGDIYPLG+RQ+GILIN QFP
Sbjct: 1   MPLSLAGTGAICTLFCIAVSFFAIVGAEDPYRFFNWNVTYGDIYPLGIRQQGILINGQFP 60

Query: 58  GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQ 117
           GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQ RRNS+EDGVYGTTCPIPPGKNFTYILQ
Sbjct: 61  GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQQRRNSYEDGVYGTTCPIPPGKNFTYILQ 120

Query: 118 VKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDL 177
           VKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPF DP GDYT+LIGDWYKSNHTDL
Sbjct: 121 VKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFADPDGDYTILIGDWYKSNHTDL 180

Query: 178 RAHLDKGKKLPLPDGILINGRG-SGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKL 236
           +AHLD GKKLP PDGILINGRG SG    VEQGKTYRLRISN+GLQNSLNFRIQNHKMKL
Sbjct: 181 KAHLDNGKKLPFPDGILINGRGPSGYYLTVEQGKTYRLRISNIGLQNSLNFRIQNHKMKL 240

Query: 237 VEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSN 296
           VEVEGTHTLQTTYSSLDVHVGQSYSVL TADQP +DYYIVVSSRFT+ VLTTTG+LHYSN
Sbjct: 241 VEVEGTHTLQTTYSSLDVHVGQSYSVLFTADQPGQDYYIVVSSRFTTQVLTTTGVLHYSN 300

Query: 297 SAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSS 356
           SAG VSGP PGGPT+QIDWSLNQARSIR+NLTASGPRPNPQGSYHYG+INT++TI L+SS
Sbjct: 301 SAGSVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGMINTSRTIILASS 360

Query: 357 AGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGAD 416
           AGQVNGKQRYA+NSVSFIP DTPLKLAD+FKI GVF+  SISD P GGGIY DT+V+  D
Sbjct: 361 AGQVNGKQRYAVNSVSFIPQDTPLKLADFFKIPGVFKENSISDRPYGGGIYLDTSVLTVD 420

Query: 417 YRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPK 476
           YRAF+EIVFQN+EDI+QS+HL+GY F+VVGMDGGQWTSASR+QYNLRDAVAR T QVYP 
Sbjct: 421 YRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTSASRDQYNLRDAVARCTAQVYPM 480

Query: 477 SWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCGKAAG 536
           SW+AIY+ LDNVGMWNLR+E WARQYLGQQ YLRVYT STSLRDEYPIPKNA  CGKA+G
Sbjct: 481 SWTAIYVPLDNVGMWNLRTEFWARQYLGQQLYLRVYTTSTSLRDEYPIPKNALTCGKASG 540

Query: 537 RHTRPL 542
           R TRPL
Sbjct: 541 RRTRPL 546

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|217074450|gb|ACJ85585.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|388494110|gb|AFK35121.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|297842363|ref|XP_002889063.1| hypothetical protein ARALYDRAFT_895494 [Arabidopsis lyrata subsp. lyrata] gi|297334904|gb|EFH65322.1| hypothetical protein ARALYDRAFT_895494 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356508933|ref|XP_003523207.1| PREDICTED: L-ascorbate oxidase homolog [Glycine max] Back     alignment and taxonomy information
>gi|356517572|ref|XP_003527461.1| PREDICTED: L-ascorbate oxidase homolog [Glycine max] Back     alignment and taxonomy information
>gi|15222981|ref|NP_177743.1| SKU5 similar 5 protein [Arabidopsis thaliana] gi|6573725|gb|AAF17645.1|AC009978_21 T23E18.10 [Arabidopsis thaliana] gi|222423158|dbj|BAH19558.1| AT1G76160 [Arabidopsis thaliana] gi|332197683|gb|AEE35804.1| SKU5 similar 5 protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15982771|gb|AAL09733.1| At1g76160/T23E18_10 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224085984|ref|XP_002307765.1| predicted protein [Populus trichocarpa] gi|222857214|gb|EEE94761.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|22531132|gb|AAM97070.1| pectinesterase, putative [Arabidopsis thaliana] gi|23198038|gb|AAN15546.1| pectinesterase, putative [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query542
TAIR|locus:2199798541 sks5 "SKU5 similar 5" [Arabido 0.992 0.994 0.835 2.1e-251
TAIR|locus:2033513542 SKS6 "SKU5-similar 6" [Arabido 0.976 0.976 0.820 8.4e-248
TAIR|locus:2036911551 sks8 "SKU5 similar 8" [Arabido 0.976 0.960 0.764 3.4e-228
TAIR|locus:2201133538 sks7 "SKU5 similar 7" [Arabido 0.959 0.966 0.752 2.2e-224
TAIR|locus:2120648541 sks4 "SKU5 similar 4" [Arabido 0.959 0.961 0.712 1.9e-209
TAIR|locus:2121823549 sks9 "SKU5 similar 9" [Arabido 0.992 0.979 0.677 2.6e-205
TAIR|locus:2132927547 sks10 "SKU5 similar 10" [Arabi 0.957 0.948 0.625 1.5e-184
TAIR|locus:2174954546 sks17 "SKU5 similar 17" [Arabi 0.985 0.978 0.569 2.8e-169
TAIR|locus:2092845554 sks11 "SKU5 similar 11" [Arabi 0.972 0.951 0.568 9e-164
TAIR|locus:2193894555 sks12 "SKU5 similar 12" [Arabi 0.976 0.953 0.554 4e-161
TAIR|locus:2199798 sks5 "SKU5 similar 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2421 (857.3 bits), Expect = 2.1e-251, P = 2.1e-251
 Identities = 452/541 (83%), Positives = 490/541 (90%)

Query:     5 LAVAASICS-LFC--SLFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDI 61
             +A +AS  + LF   SL   V+AEDPYRFF WN+TYGDIYPLGVRQ+GILIN  FPGPDI
Sbjct:     1 MAGSASFAAALFIGLSLLFAVTAEDPYRFFEWNITYGDIYPLGVRQQGILINGAFPGPDI 60

Query:    62 HSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQ 121
             HSVTNDNLIINV+NSLDEPFLLSWNGIQ RRNSF DGVYGTTCPIPPGKN+TYILQ+KDQ
Sbjct:    61 HSVTNDNLIINVYNSLDEPFLLSWNGIQQRRNSFVDGVYGTTCPIPPGKNYTYILQMKDQ 120

Query:   122 IGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHL 181
             IGSFYYFPSL FHKAAGGFGGIRILSRPRIPVPFPDPAGD TVLIGDWYK+NHTDLRA L
Sbjct:   121 IGSFYYFPSLGFHKAAGGFGGIRILSRPRIPVPFPDPAGDTTVLIGDWYKANHTDLRAQL 180

Query:   182 DKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEG 241
             D GKKLPLPDGILINGR SGA  NVEQGKTYR RISNVGLQ+SLNFRIQ+HKMK+VEVEG
Sbjct:   181 DNGKKLPLPDGILINGRSSGATLNVEQGKTYRFRISNVGLQDSLNFRIQDHKMKVVEVEG 240

Query:   242 THTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPV 301
             THTLQTT+SSLDVHVGQSYSVLVTADQ  RDYY+VVSSRFTS VLTTTGI  YSNSAG V
Sbjct:   241 THTLQTTFSSLDVHVGQSYSVLVTADQTPRDYYVVVSSRFTSNVLTTTGIFRYSNSAGGV 300

Query:   302 SGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVN 361
             SGPIPGGPT+QIDWSLNQAR+IR+NL+ASGPRPNPQGSYHYG+INTT+TIRL+SSAGQV+
Sbjct:   301 SGPIPGGPTIQIDWSLNQARAIRTNLSASGPRPNPQGSYHYGMINTTRTIRLASSAGQVD 360

Query:   362 GKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFI 421
             GKQRYA+NSVSF PADTPLK+ADYFKI GV+R GSI   PTGGGIY DT+VM  DYR F+
Sbjct:   361 GKQRYAVNSVSFKPADTPLKIADYFKIDGVYRSGSIQYQPTGGGIYLDTSVMQVDYRTFV 420

Query:   422 EIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAI 481
             EI+F+N EDI+QS+HL+GY FWVVGMDGGQW+  SRN+YNLRDAVAR TVQVYP SW+AI
Sbjct:   421 EIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLRDAVARCTVQVYPSSWTAI 480

Query:   482 YIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCGKAAGRHTRP 541
              IALDNVGMWNLRSE WARQYLGQQ YLRVYT STSLRDEYPIPKNA LCG+A+GR TRP
Sbjct:   481 LIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALLCGRASGRSTRP 540

Query:   542 L 542
             L
Sbjct:   541 L 541
GO:0005507 "copper ion binding" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0009506 "plasmodesma" evidence=IDA
GO:0016126 "sterol biosynthetic process" evidence=RCA
GO:0052541 "plant-type cell wall cellulose metabolic process" evidence=RCA
GO:0052546 "cell wall pectin metabolic process" evidence=RCA
TAIR|locus:2033513 SKS6 "SKU5-similar 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2036911 sks8 "SKU5 similar 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201133 sks7 "SKU5 similar 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120648 sks4 "SKU5 similar 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121823 sks9 "SKU5 similar 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132927 sks10 "SKU5 similar 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174954 sks17 "SKU5 similar 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092845 sks11 "SKU5 similar 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2193894 sks12 "SKU5 similar 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P29162ASOL_TOBAC1, ., 1, 0, ., 3, ., -0.52500.97230.9512N/Ano
Q00624ASOL_BRANA1, ., 1, 0, ., 3, ., -0.56940.93540.9135N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.10.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
scaffold_202568.1
annotation not avaliable (541 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query542
PLN02991543 PLN02991, PLN02991, oxidoreductase 0.0
PLN02792536 PLN02792, PLN02792, oxidoreductase 0.0
PLN02835539 PLN02835, PLN02835, oxidoreductase 0.0
PLN02354552 PLN02354, PLN02354, copper ion binding / oxidoredu 0.0
PLN02168545 PLN02168, PLN02168, copper ion binding / pectinest 0.0
PLN00044596 PLN00044, PLN00044, multi-copper oxidase-related p 1e-180
TIGR03388541 TIGR03388, ascorbase, L-ascorbate oxidase, plant t 1e-61
TIGR03389539 TIGR03389, laccase, laccase, plant 2e-56
pfam00394146 pfam00394, Cu-oxidase, Multicopper oxidase 1e-52
PLN02604566 PLN02604, PLN02604, oxidoreductase 5e-52
PLN02191574 PLN02191, PLN02191, L-ascorbate oxidase 6e-50
pfam07732119 pfam07732, Cu-oxidase_3, Multicopper oxidase 2e-39
pfam07731135 pfam07731, Cu-oxidase_2, Multicopper oxidase 7e-32
TIGR03390538 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu 1e-26
COG2132451 COG2132, SufI, Putative multicopper oxidases [Seco 2e-13
TIGR01480587 TIGR01480, copper_res_A, copper-resistance protein 4e-12
>gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase Back     alignment and domain information 
 Score =  890 bits (2301), Expect = 0.0
 Identities = 407/522 (77%), Positives = 459/522 (87%), Gaps = 1/522 (0%)

Query: 18  LFAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSL 77
           L + V+AEDPYRFF W+VTYG+I PLGV Q+GILIN +FPGPDI SVTNDNLIINVFN L
Sbjct: 18  LISFVAAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISVTNDNLIINVFNHL 77

Query: 78  DEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAA 137
           DEPFL+SW+GI+N RNS++DGVYGTTCPIPPGKN+TY LQVKDQIGSFYYFPSL FHKAA
Sbjct: 78  DEPFLISWSGIRNWRNSYQDGVYGTTCPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAA 137

Query: 138 GGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILING 197
           GGFG IRI SRP IPVPFP PA DYTVLIGDWYK+NH DLRA LD G KLPLPDGILING
Sbjct: 138 GGFGAIRISSRPLIPVPFPAPADDYTVLIGDWYKTNHKDLRAQLDNGGKLPLPDGILING 197

Query: 198 RGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVG 257
           RGSGA  N+E GKTYRLRISNVGLQNSLNFRIQNH MKLVEVEGTHT+QT +SSLDVHVG
Sbjct: 198 RGSGATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGTHTIQTPFSSLDVHVG 257

Query: 258 QSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSL 317
           QSYSVL+TADQPA+DYYIVVSSRFTS +L TTG+LHYSNSAGPVSGPIP GP  Q+ WS 
Sbjct: 258 QSYSVLITADQPAKDYYIVVSSRFTSKILITTGVLHYSNSAGPVSGPIPDGPI-QLSWSF 316

Query: 318 NQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPAD 377
           +QAR+I++NLTASGPRPNPQGSYHYG IN T+TIRL++SAG + GKQRYA+NS SF PAD
Sbjct: 317 DQARAIKTNLTASGPRPNPQGSYHYGKINITRTIRLANSAGNIEGKQRYAVNSASFYPAD 376

Query: 378 TPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHL 437
           TPLKLADYFKI GV+  GSI D PT G I+  T+VM  DY+AF+EIVF+N EDI+Q++HL
Sbjct: 377 TPLKLADYFKIAGVYNPGSIPDQPTNGAIFPVTSVMQTDYKAFVEIVFENWEDIVQTWHL 436

Query: 438 NGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSES 497
           +GY F+VVGM+ G+W++ASR  YNL DAV+R TVQVYP+SW+AIY++LDNVGMWNLRSE 
Sbjct: 437 DGYSFYVVGMELGKWSAASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMWNLRSEL 496

Query: 498 WARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCGKAAGRHT 539
           W RQYLGQQFY+RVYT STSLRDEY IPKNA LCG+A G HT
Sbjct: 497 WERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCGRATGHHT 538

Length = 543
>gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase Back     alignment and domain information
>gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase Back     alignment and domain information
>gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase Back     alignment and domain information
>gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase Back     alignment and domain information
>gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type Back     alignment and domain information
>gnl|CDD|234194 TIGR03389, laccase, laccase, plant Back     alignment and domain information
>gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase Back     alignment and domain information
>gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase Back     alignment and domain information
>gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type Back     alignment and domain information
>gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 542
PLN02835539 oxidoreductase 100.0
PLN02991543 oxidoreductase 100.0
PLN02354552 copper ion binding / oxidoreductase 100.0
PLN00044596 multi-copper oxidase-related protein; Provisional 100.0
PLN02792536 oxidoreductase 100.0
PLN02168545 copper ion binding / pectinesterase 100.0
TIGR03389539 laccase laccase, plant. Members of this protein fa 100.0
KOG1263563 consensus Multicopper oxidases [Secondary metaboli 100.0
PLN02604566 oxidoreductase 100.0
PLN02191574 L-ascorbate oxidase 100.0
TIGR03388541 ascorbase L-ascorbate oxidase, plant type. Members 100.0
TIGR03390538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 100.0
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 100.0
PRK10965523 multicopper oxidase; Provisional 100.0
PRK10883471 FtsI repressor; Provisional 100.0
COG2132451 SufI Putative multicopper oxidases [Secondary meta 100.0
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 100.0
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 100.0
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 99.96
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 99.94
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 99.78
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 99.72
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 99.65
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 99.48
PRK10965523 multicopper oxidase; Provisional 99.3
TIGR03389 539 laccase laccase, plant. Members of this protein fa 99.28
PLN02835 539 oxidoreductase 99.22
PLN02354 552 copper ion binding / oxidoreductase 99.16
PLN02168 545 copper ion binding / pectinesterase 99.13
PRK10883471 FtsI repressor; Provisional 99.12
PLN02792 536 oxidoreductase 99.11
PLN02991 543 oxidoreductase 99.1
TIGR03390 538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 99.08
PLN00044 596 multi-copper oxidase-related protein; Provisional 99.01
TIGR03388 541 ascorbase L-ascorbate oxidase, plant type. Members 98.96
COG2132451 SufI Putative multicopper oxidases [Secondary meta 98.96
PLN02604 566 oxidoreductase 98.96
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 98.85
PLN02191 574 L-ascorbate oxidase 98.81
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 98.77
KOG1263 563 consensus Multicopper oxidases [Secondary metaboli 98.59
PRK02710119 plastocyanin; Provisional 98.58
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 98.33
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 98.26
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 98.18
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 98.09
TIGR0265783 amicyanin amicyanin. Members of this family are am 97.98
PRK02888635 nitrous-oxide reductase; Validated 97.97
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 97.97
TIGR03094195 sulfo_cyanin sulfocyanin. Members of this family a 97.84
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 97.68
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 97.54
COG3794128 PetE Plastocyanin [Energy production and conversio 97.51
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 97.51
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 97.41
TIGR03102115 halo_cynanin halocyanin domain. Halocyanins are bl 97.09
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 96.63
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 96.51
PRK02710119 plastocyanin; Provisional 95.98
PRK02888635 nitrous-oxide reductase; Validated 95.94
TIGR0265783 amicyanin amicyanin. Members of this family are am 95.49
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 94.95
COG4454158 Uncharacterized copper-binding protein [Inorganic 94.72
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 94.17
PRK10378375 inactive ferrous ion transporter periplasmic prote 93.59
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 93.54
COG4454158 Uncharacterized copper-binding protein [Inorganic 93.44
TIGR03102115 halo_cynanin halocyanin domain. Halocyanins are bl 93.25
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 92.59
TIGR02695125 azurin azurin. Azurin is a blue copper-binding pro 91.02
COG3794128 PetE Plastocyanin [Energy production and conversio 90.99
TIGR02866201 CoxB cytochrome c oxidase, subunit II. Cytochrome 89.92
TIGR03094195 sulfo_cyanin sulfocyanin. Members of this family a 87.55
TIGR02866201 CoxB cytochrome c oxidase, subunit II. Cytochrome 86.59
COG1622247 CyoA Heme/copper-type cytochrome/quinol oxidases, 86.45
PF1269082 BsuPI: Intracellular proteinase inhibitor; InterPr 85.96
COG4263637 NosZ Nitrous oxide reductase [Energy production an 84.61
COG1622247 CyoA Heme/copper-type cytochrome/quinol oxidases, 81.78
TIGR02695125 azurin azurin. Azurin is a blue copper-binding pro 81.72
>PLN02835 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=6.3e-110  Score=889.35  Aligned_cols=515  Identities=62%  Similarity=1.110  Sum_probs=422.7

Q ss_pred             ecCCCeEEEEEEEEEEEecCCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCccc
Q 009149           23 SAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGT  102 (542)
Q Consensus        23 ~~~~~~~~~~l~i~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~  102 (542)
                      .+++.+++|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||++|..++++||++++
T Consensus        24 ~~~~~~~~y~~~v~~~~~~~dg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~L~~~ttiHWHGl~~~~~~~~DGv~~t  103 (539)
T PLN02835         24 NGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSWQDGVLGT  103 (539)
T ss_pred             hccCcEEEEEEEEEEEEeccCCeEEEEEEECCcCCCCCEEEECCCEEEEEEEeCCCCCCcEEeCCcccCCCCCCCCCccC
Confidence            34457899999999999999999999999999999999999999999999999999999999999999999999999989


Q ss_pred             CCCCCCCCeEEEEEEECCCceeeeEecchhhhhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccchhhHHHhhc
Q 009149          103 TCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLD  182 (542)
Q Consensus       103 q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~  182 (542)
                      ||||+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++...+.+|..+++|++++++||+++...++...+.
T Consensus       104 Q~pI~PG~sf~Y~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~~~~  183 (539)
T PLN02835        104 NCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYKTSHKTLQQRLD  183 (539)
T ss_pred             cCCCCCCCcEEEEEEECCCCEeEEEEeCccchhcCcccceeEEeCCCCCCcCCCCCCceEEEEeeccccCCHHHHHHHhh
Confidence            99999999999999987789999999999999999999999998765555566667899999999999998766655555


Q ss_pred             cCCCCCCCCeEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEE
Q 009149          183 KGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSV  262 (542)
Q Consensus       183 ~~~~~~~~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv  262 (542)
                      .+...+.++.+||||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+||++||.+++|..+++|.|++||||||
T Consensus       184 ~g~~~~~~d~~liNG~~~-~~~~v~~G~~yRlRliNa~~~~~~~f~i~gH~~~VI~~DG~~v~p~~~~~l~i~~GqRydv  262 (539)
T PLN02835        184 SGKVLPFPDGVLINGQTQ-STFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVAV  262 (539)
T ss_pred             cCCCCCCCceEEEccccC-ceEEECCCCEEEEEEEEcCCCccEEEEECCCEEEEEEECCccCCCceeeEEEECcCceEEE
Confidence            555567889999999997 8999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCCcceEEEEeeeecCCccceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCCCc
Q 009149          263 LVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHY  342 (542)
Q Consensus       263 ~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~~~~  342 (542)
                      +|++++++|+|||++............|||+|+++..+.+.++|..|..+..++...+......+.+....+.+..+...
T Consensus       263 lv~~~~~~g~y~i~a~~~~~~~~~~~~ail~Y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~  342 (539)
T PLN02835        263 LVTLNQSPKDYYIVASTRFTRQILTATAVLHYSNSRTPASGPLPALPSGELHWSMRQARTYRWNLTASAARPNPQGSFHY  342 (539)
T ss_pred             EEEcCCCCCcEEEEEEccccCCCcceEEEEEECCCCCCCCCCCCCCCccccccccchhhccccccCccccCCCCCccccc
Confidence            99999888999999875443344678999999886532222333322111111122222222233333233333222212


Q ss_pred             cccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCccccceEEeccCCcEEE
Q 009149          343 GLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIE  422 (542)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~  422 (542)
                      .....++++.+.......++...|+|||.+|..|++|+|++.++..++.|+.+++...+.+...+.++.++.++.|++||
T Consensus       343 ~~~~~~~~~~~~~~~~~~~g~~~w~iN~~s~~~p~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~Ve  422 (539)
T PLN02835        343 GKITPTKTIVLANSAPLINGKQRYAVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQSLPSGGPAFVATSVMQTSLHDFLE  422 (539)
T ss_pred             cccCCCceEEEeccccccCCeEEEEECCcccCCCCCChhhhhhhcCCCccccCccccCCCCCccccCCeEEEcCCCCEEE
Confidence            22233555544322222246678999999999899999887766666777654333233333355678899999999999


Q ss_pred             EEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeEEEeechhhhh
Q 009149          423 IVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQY  502 (542)
Q Consensus       423 ~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d  502 (542)
                      |+|+|.+...||||||||+||||++|.|.|++.....+|+.||++|||+.|+++||++|||+|||||.|+|||||++|+.
T Consensus       423 ivi~N~~~~~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~nl~nP~~RDTv~vp~~gw~~IrF~aDNPG~Wl~HCHi~~H~~  502 (539)
T PLN02835        423 VVFQNNEKTMQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWNMRSAIWERQY  502 (539)
T ss_pred             EEEECCCCCCCCCCCCCccEEEEeccCCCCCcccccccCCCCCCccceEEeCCCCEEEEEEECcCCEEeeeeecchhhhh
Confidence            99999988899999999999999999998986555567899999999999999999999999999999999999999999


Q ss_pred             cceEEEEEEecCCccccccCCCCCcchhccccCCCC
Q 009149          503 LGQQFYLRVYTASTSLRDEYPIPKNARLCGKAAGRH  538 (542)
Q Consensus       503 ~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~~~~  538 (542)
                      .||+++|+|.++.+...++++||++++.||..++..
T Consensus       503 ~Gm~~~~~V~~~~~~~~~~~~~P~~~~~Cg~~~~~~  538 (539)
T PLN02835        503 LGQQFYLRVWNQVHSLANEYDIPDNALLCGKAIGRH  538 (539)
T ss_pred             cccEEEEEEccCCCccccccCCCccccccccCccCC
Confidence            999999999988776667899999999999888744

>PLN02991 oxidoreductase Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>TIGR03389 laccase laccase, plant Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>TIGR03389 laccase laccase, plant Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>TIGR03094 sulfo_cyanin sulfocyanin Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>COG3794 PetE Plastocyanin [Energy production and conversion] Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>TIGR03102 halo_cynanin halocyanin domain Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR03102 halo_cynanin halocyanin domain Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>TIGR02695 azurin azurin Back     alignment and domain information
>COG3794 PetE Plastocyanin [Energy production and conversion] Back     alignment and domain information
>TIGR02866 CoxB cytochrome c oxidase, subunit II Back     alignment and domain information
>TIGR03094 sulfo_cyanin sulfocyanin Back     alignment and domain information
>TIGR02866 CoxB cytochrome c oxidase, subunit II Back     alignment and domain information
>COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] Back     alignment and domain information
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo Back     alignment and domain information
>COG4263 NosZ Nitrous oxide reductase [Energy production and conversion] Back     alignment and domain information
>COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] Back     alignment and domain information
>TIGR02695 azurin azurin Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query542
1aoz_A552 Refined Crystal Structure Of Ascorbate Oxidase At 1 3e-42
1hfu_A503 Type-2 Cu-Depleted Laccase From Coprinus Cinereus A 2e-25
1a65_A504 Type-2 Cu-depleted Laccase From Coprinus Cinereus L 5e-25
4a2f_A497 Coriolopsis Gallica Laccase Collected At 12.65 Kev 3e-24
4a2d_A496 Coriolopsis Gallica Laccase T2 Copper Depleted At P 3e-24
1gyc_A499 Crystal Structure Determination At Room Temperature 6e-24
3kw7_A502 Crystal Structure Of Lacb From Trametes Sp. Ah28-2 1e-23
2qt6_A498 Crystal Structure Determination Of A Blue Laccase F 2e-23
2hrg_A496 Crystal Structure Of Blue Laccase From Trametes Tro 8e-23
2xyb_A497 Crystal Structure Of A Fully Functional Laccase Fro 1e-22
3fpx_A499 Native Fungus Laccase From Trametes Hirsuta Length 3e-22
3pxl_A499 Type-2 Cu-Depleted Fungus Laccase From Trametes Hir 6e-22
3div_A499 Crystal Structure Of Laccase From Cerrena Maxima At 6e-21
1kya_A499 Active Laccase From Trametes Versicolor Complexed W 9e-21
3t6v_A495 Crystal Structure Of Laccase From Steccherinum Ochr 3e-20
3v9e_A580 Structure Of The L513m Mutant Of The Laccase From B 6e-20
3sqr_A580 Crystal Structure Of Laccase From Botrytis Aclada A 7e-20
2h5u_A499 Crystal Structure Of Laccase From Cerrena Maxima At 8e-19
1zpu_A534 Crystal Structure Of Fet3p, A Multicopper Oxidase T 1e-17
1gw0_A559 Crystal Structure Of Laccase From Melanocarpus Albo 1e-17
3dkh_A559 L559a Mutant Of Melanocarpus Albomyces Laccase Leng 2e-17
2q9o_A559 Near-Atomic Resolution Structure Of A Melanocarpus 2e-17
3pps_A604 Crystal Structure Of An Ascomycete Fungal Laccase F 2e-16
1v10_A521 Structure Of Rigidoporus Lignosus Laccase From Hemi 2e-16
2hzh_A499 Crystal Structure Of Laccase From Coriolus Zonatus 2e-15
2xu9_A439 Crystal Structure Of Laccase From Thermus Thermophi 2e-07
3g5w_A318 Crystal Structure Of Blue Copper Oxidase From Nitro 3e-07
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 Back     alignment and structure 
Iteration: 1

 Score =  169 bits (428), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 153/563 (27%), Positives = 246/563 (43%), Gaps = 80/563 (14%)
Query: 29  RFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLD-EPFLLSWNG 87
           R + W V Y    P       + IN QFPGP I +   D++++ + N L  E  ++ W+G
Sbjct: 4   RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63
Query: 88  IQNRRNSFEDGVYGTT-CPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 146
           I  R   + DG    + C I PG+ F Y   V D  G+F+Y   L   ++AG +G + + 
Sbjct: 64  ILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVD 122
Query: 147 SRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKG--KKLPLPDGILINGRG----S 200
                  PF    G+  +L+ DW+  +       L     + +  P  IL+NGRG    S
Sbjct: 123 PPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCS 181
Query: 201 GAA---------------------FNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEV 239
            AA                     F+V   KTYR+RI++     +LNF I NH++ +VE 
Sbjct: 182 IAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEA 241
Query: 240 EGTHTLQTTYSSLDVHVGQSYSVLVTADQ-PARDYYIVVSSRF----TSTVLTTTGILHY 294
           +G +      S +D++ G+SYSVL+T DQ P+ +Y++ V +R     T   LT    L  
Sbjct: 242 DGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPN 301
Query: 295 SNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLS 354
           S S  P S P P  P        +++++    +TA+   P P        +   + I L 
Sbjct: 302 SVSKLPTSPP-PQTPAWD---DFDRSKNFTYRITAAMGSPKPP-------VKFNRRIFLL 350
Query: 355 SSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIG----------SISDNPT-- 402
           ++   +NG  ++AIN VS     TP   A  + +   F              I   PT  
Sbjct: 351 NTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNE 410
Query: 403 ----GGGIYQDTAVMGADYRAFIEIVFQN----DEDIIQS--YHLNGYQFWVVGMDGGQW 452
               G G+YQ            ++++ QN     E++ ++  +HL+G+ FWV+G   G++
Sbjct: 411 KTRIGNGVYQ------FKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKF 464
Query: 453 TSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVY 512
           ++   +  NL++   R TV ++P  W+AI    DN G+W          ++G        
Sbjct: 465 SAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF--- 521
Query: 513 TASTSLRDEYPIPKNARLCGKAA 535
             +  +     IP  A  CG  A
Sbjct: 522 --AEGVEKVGRIPTKALACGGTA 542
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 Back     alignment and structure
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 Back     alignment and structure
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 Back     alignment and structure
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 Back     alignment and structure
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 Back     alignment and structure
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 Back     alignment and structure
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 Back     alignment and structure
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 Back     alignment and structure
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 Back     alignment and structure
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 Back     alignment and structure
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 Back     alignment and structure
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 Back     alignment and structure
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 Back     alignment and structure
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 Back     alignment and structure
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 Back     alignment and structure
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 Back     alignment and structure
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 Back     alignment and structure
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 Back     alignment and structure
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 Back     alignment and structure
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 Back     alignment and structure
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus Hb27 Length = 439 Back     alignment and structure
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas Europaea Length = 318 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query542
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 0.0
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 3e-93
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 1e-84
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 8e-82
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 1e-80
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 4e-80
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 1e-79
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 4e-76
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 2e-52
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 2e-51
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 2e-37
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 4e-30
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 5e-28
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 1e-25
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 1e-22
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 1e-19
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 2e-19
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 2e-18
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 6e-09
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 2e-19
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 8e-18
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 1e-17
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 2e-05
2zoo_A442 Probable nitrite reductase; electron transfer, ele 2e-17
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 9e-17
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 9e-15
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 2e-14
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 1e-13
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 2e-13
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 4e-13
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 5e-13
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 6e-09
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 8e-09
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 8e-07
1sdd_B647 Coagulation factor V; copper-binding protein, cofa 2e-06
2r7e_B770 Coagulation factor VIII; ceruloplasmin fold, cuppe 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 Back     alignment and structure
 Score =  533 bits (1374), Expect = 0.0
 Identities = 140/556 (25%), Positives = 233/556 (41%), Gaps = 62/556 (11%)

Query: 29  RFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSL-DEPFLLSWNG 87
           R + W V Y    P       + IN QFPGP I +   D++++ + N L  E  ++ W+G
Sbjct: 4   RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63

Query: 88  IQNRRNSFEDGVYGTT-CPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 146
           I  R   + DG    + C I PG+ F Y   V D  G+F+Y   L   ++AG +G + + 
Sbjct: 64  ILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVD 122

Query: 147 SRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKG--KKLPLPDGILINGRG----- 199
                  PF    G+  +L+ DW+  +       L     + +  P  IL+NGRG     
Sbjct: 123 PPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCS 181

Query: 200 --------------------SGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEV 239
                               +   F+V   KTYR+RI++     +LNF I NH++ +VE 
Sbjct: 182 IAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEA 241

Query: 240 EGTHTLQTTYSSLDVHVGQSYSVLVTADQ-PARDYYIVVSSRFTS-TVLTTTGILHYSNS 297
           +G +      S +D++ G+SYSVL+T DQ P+ +Y++ V +R           +L+Y  +
Sbjct: 242 DGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPN 301

Query: 298 AGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSA 357
           +       P   T   D   +++++    +TA+   P P        +   + I L ++ 
Sbjct: 302 SVSKLPTSPPPQTPAWD-DFDRSKNFTYRITAAMGSPKPP-------VKFNRRIFLLNTQ 353

Query: 358 GQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGS----------ISDNPTGGGIY 407
             +NG  ++AIN VS     TP   A  + +   F              I   PT     
Sbjct: 354 NVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTR 413

Query: 408 QDTAVMGADYRAFIEIVFQN------DEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYN 461
               V        ++++ QN      +      +HL+G+ FWV+G   G++++   +  N
Sbjct: 414 IGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLN 473

Query: 462 LRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDE 521
           L++   R TV ++P  W+AI    DN G+W          ++G             +   
Sbjct: 474 LKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAE-----GVEKV 528

Query: 522 YPIPKNARLCGKAAGR 537
             IP  A  CG  A  
Sbjct: 529 GRIPTKALACGGTAKS 544
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Length = 770 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query542
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 100.0
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 100.0
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 100.0
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 100.0
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 100.0
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 100.0
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 100.0
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 100.0
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 100.0
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 100.0
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 100.0
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 100.0
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 100.0
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 100.0
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 100.0
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 100.0
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 100.0
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 100.0
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 100.0
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 100.0
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 100.0
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 100.0
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 100.0
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 100.0
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 100.0
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 100.0
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 100.0
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 100.0
2zoo_A442 Probable nitrite reductase; electron transfer, ele 100.0
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 100.0
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 100.0
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 100.0
1sdd_B647 Coagulation factor V; copper-binding protein, cofa 100.0
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 100.0
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 100.0
2r7e_B770 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 99.97
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 99.96
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 99.96
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 99.9
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 99.89
1sdd_B 647 Coagulation factor V; copper-binding protein, cofa 99.89
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 99.88
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 99.86
2r7e_B 770 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.85
2zoo_A 442 Probable nitrite reductase; electron transfer, ele 99.83
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 99.81
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 99.66
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 99.65
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 99.62
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 99.6
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 99.6
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 99.56
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 99.5
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 99.49
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 99.46
2cal_A154 Rusticyanin; iron respiratory electron transport c 99.46
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 99.46
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 99.44
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 99.43
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 99.42
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 99.38
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 99.38
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 99.37
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 99.3
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 99.28
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 99.24
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 99.24
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 99.22
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 99.18
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 99.17
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 99.13
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 99.09
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 99.03
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 98.98
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 98.97
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 98.97
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 98.88
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 98.86
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 98.82
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 98.79
3c75_A132 Amicyanin; copper proteins, electron transfer comp 98.76
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 98.72
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 98.7
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 98.68
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 98.63
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 98.61
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 98.6
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 98.6
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 98.58
1byp_A99 Protein (plastocyanin); electron transfer, photosy 98.57
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 98.57
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 98.56
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 98.53
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 98.5
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 98.47
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 98.43
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 98.42
1byp_A99 Protein (plastocyanin); electron transfer, photosy 98.36
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 98.32
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 98.32
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 98.28
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 98.25
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 98.22
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 98.21
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 98.21
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 98.02
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 98.02
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 97.98
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 97.97
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 97.93
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 97.93
2cal_A154 Rusticyanin; iron respiratory electron transport c 97.91
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 97.87
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 97.87
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 97.29
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 97.11
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 97.1
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 97.06
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 96.98
3c75_A132 Amicyanin; copper proteins, electron transfer comp 96.95
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 96.91
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 96.74
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 96.5
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 96.41
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 96.27
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 96.07
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 95.68
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 95.61
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 95.5
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 95.25
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 94.6
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 94.51
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 94.27
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 93.66
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 93.12
3isy_A120 Bsupi, intracellular proteinase inhibitor; intrace 85.46
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
Probab=100.00  E-value=2.4e-100  Score=830.41  Aligned_cols=492  Identities=28%  Similarity=0.508  Sum_probs=394.5

Q ss_pred             CCeEEEEEEEEEEEecCCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCC-CCceEEeccccCCCCCCCCCCccc-C
Q 009149           26 DPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLD-EPFLLSWNGIQNRRNSFEDGVYGT-T  103 (542)
Q Consensus        26 ~~~~~~~l~i~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-q  103 (542)
                      +.+|+|+|+|++..+.+||.++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ |
T Consensus         1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq   80 (552)
T 1aoz_A            1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ   80 (552)
T ss_dssp             CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred             CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence            35899999999999999999999999999999999999999999999999997 999999999999998899999999 9


Q ss_pred             CCCCCCCeEEEEEEECCCceeeeEecchhhhhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccchhhHHHhhcc
Q 009149          104 CPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDK  183 (542)
Q Consensus       104 ~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~  183 (542)
                      |+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.....++ ..|+|++|+|+||+++...++...+..
T Consensus        81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~  158 (552)
T 1aoz_A           81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS  158 (552)
T ss_dssp             CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred             CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence            999999999999997 899999999999999999999999999976544455 336899999999999876655433322


Q ss_pred             C--CCCCCCCeEEEcCCCCC-------------------------ceEEEecCcEEEEEEEEcCCCceEEEEEecceeEE
Q 009149          184 G--KKLPLPDGILINGRGSG-------------------------AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKL  236 (542)
Q Consensus       184 ~--~~~~~~~~~liNG~~~~-------------------------~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~v  236 (542)
                      .  .....++.+||||+...                         +.++|++|++|||||||+|..+.+.|+|+||+|+|
T Consensus       159 ~~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v  238 (552)
T 1aoz_A          159 KPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV  238 (552)
T ss_dssp             SSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE
T ss_pred             ccccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE
Confidence            1  12245789999999852                         17999999999999999999999999999999999


Q ss_pred             EeecCcccceeeeeeEEEcCCceEEEEEEe-CCCCcceEEEEeeeec-CCccceEEEEEecCCCCC--CCCCCCCCCc-c
Q 009149          237 VEVEGTHTLQTTYSSLDVHVGQSYSVLVTA-DQPARDYYIVVSSRFT-STVLTTTGILHYSNSAGP--VSGPIPGGPT-V  311 (542)
Q Consensus       237 ia~DG~~~~p~~~~~l~l~pgeR~dv~v~~-~~~~g~y~i~~~~~~~-~~~~~~~ail~y~~~~~~--~~~~~p~~p~-~  311 (542)
                      ||+||.+++|+.+++|.|+|||||||+|++ ++.+|+|||++..... .+.....|+|+|.+....  +..+.|..|. .
T Consensus       239 i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~  318 (552)
T 1aoz_A          239 VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWD  318 (552)
T ss_dssp             EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTT
T ss_pred             EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccc
Confidence            999999999999999999999999999999 4468999999987643 234568899999876531  1111222221 1


Q ss_pred             ccccccccccccccCCCCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcc
Q 009149          312 QIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGV  391 (542)
Q Consensus       312 ~~~~~~~~~~~l~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~  391 (542)
                      +......  ..+. .+....+.+.|        ...++++.+.......++...|+|||++|..++.|+|++.+..++++
T Consensus       319 ~~~~~~~--~~l~-~l~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~  387 (552)
T 1aoz_A          319 DFDRSKN--FTYR-ITAAMGSPKPP--------VKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHA  387 (552)
T ss_dssp             CHHHHHH--HHTT-CCBCTTCCCCC--------SSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTS
T ss_pred             ccccccc--cccc-ccccCCCCCCC--------CCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCccc
Confidence            1110000  0011 11100011111        23567777655432234567899999999999999988877666666


Q ss_pred             eecCCCCC----------CCCCCCccccceEEeccCCcEEEEEEEcCCC------CCCCeeecCcceEEEeecCCCCCCc
Q 009149          392 FRIGSISD----------NPTGGGIYQDTAVMGADYRAFIEIVFQNDED------IIQSYHLNGYQFWVVGMDGGQWTSA  455 (542)
Q Consensus       392 ~~~~~~~~----------~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~------~~HP~HlHG~~F~Vl~~~~g~~~~~  455 (542)
                      |+.+....          .+.+...+.++.++.++.|++|+|+|+|.+.      ..||||||||+||||+++.|.|++.
T Consensus       388 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~  467 (552)
T 1aoz_A          388 FDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAE  467 (552)
T ss_dssp             SCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGG
T ss_pred             cccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcc
Confidence            65332110          0112234566788999999999999999873      4699999999999999998888874


Q ss_pred             CCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeEEEeechhhhhcceEEEEEEecCCccccccCCCCCcchhccccC
Q 009149          456 SRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCGKAA  535 (542)
Q Consensus       456 ~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~  535 (542)
                      ....+|+.+|.|||||.|+++||++|||+|||||.|+|||||++|++.|||+.|.|...     +++++|++++.||.++
T Consensus       468 ~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-----~~~~~P~~~~~C~~~~  542 (552)
T 1aoz_A          468 EESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALACGGTA  542 (552)
T ss_dssp             GGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSSHHHH
T ss_pred             cccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----hhccCCcchhhhhccC
Confidence            44568899999999999999999999999999999999999999999999999987532     3667899999999876
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 542
d1aoza3214 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C 1e-35
d1v10a2168 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus 9e-33
d1aoza2209 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C 2e-32
d2q9oa2181 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce 1e-29
d1hfua2172 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr 3e-29
d1gyca2170 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, 4e-28
d1gyca1130 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la 3e-25
d1hfua1131 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin 8e-25
d1v10a1136 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T 3e-22
d1aoza1129 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc 6e-22
d2q9oa1162 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces 2e-18
d1kv7a2165 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc 8e-16
d1oe2a1159 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige 7e-12
d1kv7a1140 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch 9e-12
d1kbva1151 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser 9e-11
d2q9oa3216 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce 2e-10
d1gska2174 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba 2e-10
d2bw4a1157 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcalige 3e-08
d1v10a3190 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus 7e-08
d1sdda1180 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t 7e-08
d1e30a_153 b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan 8e-08
d2j5wa1192 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie 1e-07
d1sddb2139 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B 3e-07
d1hfua3200 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr 3e-07
d1mzya1153 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodoba 3e-06
d2j5wa3207 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sap 3e-06
d2j5wa5149 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa 4e-06
d1gyca3199 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, 2e-05
d1gska1181 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Baci 2e-05
d2j5wa4179 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sap 3e-05
d2j5wa2145 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap 4e-05
d1gska3154 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba 0.001
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 Back     information, alignment and structure

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

 Score =  130 bits (328), Expect = 1e-35
 Identities = 46/206 (22%), Positives = 77/206 (37%), Gaps = 21/206 (10%)

Query: 346 NTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIG---------- 395
              + I L ++   +NG  ++AIN VS     TP   A  + +   F             
Sbjct: 4   KFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDY 63

Query: 396 SISDNPTGGGIYQDTAVMGADYRAFIEIVFQ------NDEDIIQSYHLNGYQFWVVGMDG 449
            I   PT         V        ++++ Q       +      +HL+G+ FWV+G   
Sbjct: 64  DIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGD 123

Query: 450 GQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYL 509
           G++++   +  NL++   R TV ++P  W+AI    DN G+W          ++G     
Sbjct: 124 GKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF 183

Query: 510 RVYTASTSLRDEYPIPKNARLCGKAA 535
                   +     IP  A  CG  A
Sbjct: 184 AE-----GVEKVGRIPTKALACGGTA 204
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 157 Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Length = 153 Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 207 Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 181 Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 179 Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query542
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 100.0
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 100.0
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 100.0
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 100.0
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 100.0
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 100.0
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 100.0
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 100.0
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.98
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.97
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.97
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.97
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 99.96
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.96
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.96
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 99.96
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.96
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.96
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.95
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.95
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 99.95
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.91
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.89
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.88
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.88
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 99.87
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.87
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.86
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.85
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.85
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.85
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 99.84
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.83
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.82
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.68
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.68
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.68
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.68
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.67
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.64
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 99.6
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.58
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.57
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 99.55
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 99.48
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.37
d1sddb167 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.37
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.28
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 99.24
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 99.21
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.19
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.19
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.18
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.14
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.11
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 99.03
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 99.01
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 98.98
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 98.97
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 98.96
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 98.92
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 98.9
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 98.89
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.84
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 98.75
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 98.65
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 98.6
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 98.53
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 98.53
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 98.53
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 98.47
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 98.43
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 98.42
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 98.37
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 98.37
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 98.35
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 98.35
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 98.33
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 98.31
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 98.24
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 98.22
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 98.2
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.17
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 98.15
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 98.11
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 98.08
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 98.03
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 97.98
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 97.97
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 97.97
d1paza_120 Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta 97.97
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 97.88
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 97.88
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 97.87
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 97.83
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 97.81
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 97.8
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 97.76
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 97.65
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 97.62
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 97.5
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 97.46
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 97.36
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 97.36
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 97.27
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 97.07
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 96.92
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 96.92
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 96.83
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 96.67
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 96.47
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 96.38
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 96.26
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 96.24
d1sddb167 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 96.17
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 96.16
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 96.0
d1paza_120 Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta 95.98
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 95.98
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 95.91
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 95.62
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 95.24
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 94.99
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 94.93
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 94.9
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 94.77
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 93.93
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 93.64
d1cyxa_158 Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 90.04
d3dtub1152 Cytochrome c oxidase {Rhodobacter sphaeroides [Tax 82.14
d1cyxa_158 Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 80.82
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

Probab=100.00  E-value=2.5e-40  Score=310.21  Aligned_cols=183  Identities=25%  Similarity=0.429  Sum_probs=154.3

Q ss_pred             cceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCC----------CCCCCCCccccceEEecc
Q 009149          347 TTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSIS----------DNPTGGGIYQDTAVMGAD  416 (542)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~----------~~p~~~~~~~~~~~~~~~  416 (542)
                      .+|++.+..++...+|..+|+|||.+|..|++|+|++.++...++++.+...          ..+.+...+.++.++.++
T Consensus         5 ~~~ti~l~~~~~~~ng~~~~~iNniSf~~P~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~v~~~~   84 (214)
T d1aoza3           5 FNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFK   84 (214)
T ss_dssp             CSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEEC
T ss_pred             CCeEEEEecCccccCCeEEEEECCEeccCCCcchHHHHhhccccccccCCCcccccccccccCCCCCcccccCceeEEec
Confidence            5688887555445678899999999999999999988877766655543211          112235567889999999


Q ss_pred             CCcEEEEEEEcCC------CCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCcee
Q 009149          417 YRAFIEIVFQNDE------DIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGM  490 (542)
Q Consensus       417 ~g~~v~~~i~N~~------~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~  490 (542)
                      .|++|||+|+|.+      ...||||||||+||||+++.|.++......+++.+|.+|||+.|++++|++|||++||||.
T Consensus        85 ~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~adnpG~  164 (214)
T d1aoza3          85 IGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGV  164 (214)
T ss_dssp             TTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEE
T ss_pred             CCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEecCCCee
Confidence            9999999999965      3579999999999999999999988777779999999999999999999999999999999


Q ss_pred             eEEEeechhhhhcceEEEEEEecCCccccccCCCCCcchhcccc
Q 009149          491 WNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCGKA  534 (542)
Q Consensus       491 w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~  534 (542)
                      |+||||+++|++.|||+.|.|...     +..++|.+++.||.+
T Consensus       165 w~~HCH~~~H~~~GM~~~~~v~~~-----~~~~~P~~~~~cg~~  203 (214)
T d1aoza3         165 WAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALACGGT  203 (214)
T ss_dssp             EEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSSHHH
T ss_pred             EEEEECcHHHHhCcCcEEEEEccc-----cccCCCccccccccc
Confidence            999999999999999999988532     366899999999954
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3dtub1 b.6.1.2 (B:130-281) Cytochrome c oxidase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure