Citrus Sinensis ID: 009162
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 541 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LIR6 | 575 | Beta-amylase 1, chloropla | yes | no | 0.791 | 0.744 | 0.521 | 1e-135 | |
| O23553 | 548 | Beta-amylase 3, chloropla | no | no | 0.865 | 0.854 | 0.472 | 1e-127 | |
| O22585 | 496 | Beta-amylase OS=Medicago | N/A | no | 0.800 | 0.872 | 0.4 | 2e-95 | |
| P10537 | 499 | Beta-amylase OS=Ipomoea b | N/A | no | 0.783 | 0.849 | 0.395 | 8e-92 | |
| P82993 | 535 | Beta-amylase OS=Hordeum v | N/A | no | 0.787 | 0.796 | 0.401 | 2e-91 | |
| P16098 | 535 | Beta-amylase OS=Hordeum v | N/A | no | 0.787 | 0.796 | 0.394 | 2e-91 | |
| O64407 | 496 | Beta-amylase OS=Vigna ung | N/A | no | 0.800 | 0.872 | 0.388 | 3e-91 | |
| P55005 | 488 | Beta-amylase OS=Zea mays | N/A | no | 0.828 | 0.918 | 0.372 | 1e-90 | |
| O65015 | 496 | Beta-amylase OS=Trifolium | N/A | no | 0.789 | 0.860 | 0.394 | 4e-90 | |
| P10538 | 496 | Beta-amylase OS=Glycine m | no | no | 0.804 | 0.877 | 0.391 | 3e-89 |
| >sp|Q9LIR6|BAM1_ARATH Beta-amylase 1, chloroplastic OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1 | Back alignment and function desciption |
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Score = 484 bits (1245), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/435 (52%), Positives = 297/435 (68%), Gaps = 7/435 (1%)
Query: 77 PVFVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVYDWRGY 136
PVFV +P DS +G V RRKAM S +AL +AGVEG++++VWWG+VE++ PG Y+W GY
Sbjct: 107 PVFVMMPLDSVTMGNTVNRRKAMKASLQALKSAGVEGIMIDVWWGLVEKESPGTYNWGGY 166
Query: 137 FDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRFGRRNM 196
+L+ LA GLKV+A+++FHQCG GD +PLPQWV+EE+DKDPDLAY+D++GRRN
Sbjct: 167 NELLELAKKLGLKVQAVMSFHQCGGNVGDSVTIPLPQWVVEEVDKDPDLAYTDQWGRRNH 226
Query: 197 EYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIITGVQVGMGPAGELRYPSLP 256
EYISLG D LPVL+GR+P+Q Y DFMR FRD F+ LLG I +QVGMGPAGELRYPS P
Sbjct: 227 EYISLGADTLPVLKGRTPVQCYADFMRAFRDNFKHLLGETIVEIQVGMGPAGELRYPSYP 286
Query: 257 SQKLMWSWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEFF 316
Q+ +W+ +G FQCYDKY L+SL A A G EWG GP A + PE T+FF
Sbjct: 287 EQE--GTWKFPGIGAFQCYDKYSLSSLKAAAETYGKPEWGSTGPTDAGHYNNWPEDTQFF 344
Query: 317 RTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPS 376
+ + G WN+ YG+FFL WYS MLL HGERI A++IF V S K+ GIHWHYGT S
Sbjct: 345 KKEGGGWNSEYGDFFLSWYSQMLLDHGERILSSAKSIFENMGVKISVKIAGIHWHYGTRS 404
Query: 377 HPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQL 436
H ELTAGYYNT RDG+LPIA++ R+ +C EMRD ++ Q + +PE + Q+
Sbjct: 405 HAPELTAGYYNTRFRDGYLPIAQMLARHNAIFNFTCIEMRDHEQPQ-DALCAPEKLVNQV 463
Query: 437 LLAARICEIPLEGENSATSLDDAAFQQVIKMSKF----YSEGLEKPSFSFNFLRMDKNMF 492
LA E+PL GEN+ DD A +Q++K S +EG + +F +LRM+ +F
Sbjct: 464 ALATLAAEVPLAGENALPRYDDYAHEQILKASALNLDQNNEGEPREMCAFTYLRMNPELF 523
Query: 493 EYHNWVRFTRFVRQL 507
+ NW +F FV+++
Sbjct: 524 QADNWGKFVAFVKKM 538
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Beta-amylase activity. Can use p-nitrophenyl maltopentaoside (PNPG5) as substrate only in reduced form. Can play a minor role in the starch degradation and maltose metabolism in chloroplasts during the night. More active on phosphorylated glucan. Interacts directly with starch or other alpha-1,4-glucan. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2 |
| >sp|O23553|BAM3_ARATH Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=BAM3 PE=1 SV=3 | Back alignment and function description |
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| >sp|O22585|AMYB_MEDSA Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P10537|AMYB_IPOBA Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4 | Back alignment and function description |
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| >sp|P82993|AMYB_HORVS Beta-amylase OS=Hordeum vulgare subsp. spontaneum GN=BMY1 PE=1 SV=1 | Back alignment and function description |
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| >sp|P16098|AMYB_HORVU Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1 | Back alignment and function description |
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| >sp|O64407|AMYB_VIGUN Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P55005|AMYB_MAIZE Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1 | Back alignment and function description |
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| >sp|O65015|AMYB_TRIRP Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P10538|AMYB_SOYBN Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 541 | ||||||
| 402171764 | 541 | beta-amylase 3 [Citrus trifoliata] | 1.0 | 1.0 | 0.987 | 0.0 | |
| 224053751 | 555 | predicted protein [Populus trichocarpa] | 1.0 | 0.974 | 0.670 | 0.0 | |
| 147795448 | 542 | hypothetical protein VITISV_014849 [Viti | 0.970 | 0.968 | 0.696 | 0.0 | |
| 359473953 | 584 | PREDICTED: beta-amylase 1, chloroplastic | 0.909 | 0.842 | 0.729 | 0.0 | |
| 449453308 | 546 | PREDICTED: beta-amylase 1, chloroplastic | 0.892 | 0.884 | 0.726 | 0.0 | |
| 356527702 | 553 | PREDICTED: beta-amylase 1, chloroplastic | 0.992 | 0.971 | 0.645 | 0.0 | |
| 224075158 | 437 | predicted protein [Populus trichocarpa] | 0.807 | 1.0 | 0.745 | 0.0 | |
| 356513259 | 557 | PREDICTED: beta-amylase 3, chloroplastic | 0.970 | 0.942 | 0.658 | 0.0 | |
| 356513261 | 557 | PREDICTED: beta-amylase 3, chloroplastic | 0.970 | 0.942 | 0.649 | 0.0 | |
| 449525309 | 395 | PREDICTED: beta-amylase 1, chloroplastic | 0.646 | 0.886 | 0.814 | 1e-175 |
| >gi|402171764|gb|AFQ33615.1| beta-amylase 3 [Citrus trifoliata] | Back alignment and taxonomy information |
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Score = 1115 bits (2883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/541 (98%), Positives = 536/541 (99%)
Query: 1 MAIATFAPSFCCTRTEPTQLPRFRLTHSHKLQSQTRRLSVSCRLNSSNSLSPADNNNNNR 60
MAIATFAPSFCCTRTEPTQLPRFRLTHSHK QSQTRRLSVSCRLNSSNSLSPADNNNNNR
Sbjct: 1 MAIATFAPSFCCTRTEPTQLPRFRLTHSHKFQSQTRRLSVSCRLNSSNSLSPADNNNNNR 60
Query: 61 YKLHDGASSQGRRNGSPVFVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWW 120
YKLHDGASSQGRRNGSPVFVKLPEDSTMIGGKVK RKAMAQSFKALAAAGVEGVVVEVWW
Sbjct: 61 YKLHDGASSQGRRNGSPVFVKLPEDSTMIGGKVKGRKAMAQSFKALAAAGVEGVVVEVWW 120
Query: 121 GVVERDRPGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEID 180
GVVERDRPGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSG GDPKWVPLPQWVLEEID
Sbjct: 121 GVVERDRPGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSGSGDPKWVPLPQWVLEEID 180
Query: 181 KDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIITGV 240
KDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIITGV
Sbjct: 181 KDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIITGV 240
Query: 241 QVGMGPAGELRYPSLPSQKLMWSWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGP 300
QVGMGPAGELRYPSLPSQKL WSWRSRELGEFQCYDKYMLASLNACARE+GMREWGDGGP
Sbjct: 241 QVGMGPAGELRYPSLPSQKLTWSWRSRELGEFQCYDKYMLASLNACAREVGMREWGDGGP 300
Query: 301 IGASNLMQDPEHTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVN 360
IGASNLMQDPEHTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVN
Sbjct: 301 IGASNLMQDPEHTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVN 360
Query: 361 TSAKVGGIHWHYGTPSHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDE 420
TSAKVGGIHWHYGTPSHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSC EMRDVDE
Sbjct: 361 TSAKVGGIHWHYGTPSHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCLEMRDVDE 420
Query: 421 KQMNPFSSPEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKPSF 480
KQMNPFSSPEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKPSF
Sbjct: 421 KQMNPFSSPEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKPSF 480
Query: 481 SFNFLRMDKNMFEYHNWVRFTRFVRQLSGSSIFRAKLDFRGDIRPSSASDFAKVGLAFAY 540
SFNF+RMDKNMFEYHNWVRFTRFVRQLSGSSIFRAKLDFRGDIRPSSASDFAKVGLAFAY
Sbjct: 481 SFNFVRMDKNMFEYHNWVRFTRFVRQLSGSSIFRAKLDFRGDIRPSSASDFAKVGLAFAY 540
Query: 541 C 541
C
Sbjct: 541 C 541
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Source: Citrus trifoliata Species: Citrus trifoliata Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224053751|ref|XP_002297961.1| predicted protein [Populus trichocarpa] gi|222845219|gb|EEE82766.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|147795448|emb|CAN65860.1| hypothetical protein VITISV_014849 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359473953|ref|XP_002263816.2| PREDICTED: beta-amylase 1, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449453308|ref|XP_004144400.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356527702|ref|XP_003532447.1| PREDICTED: beta-amylase 1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|224075158|ref|XP_002304568.1| predicted protein [Populus trichocarpa] gi|222842000|gb|EEE79547.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356513259|ref|XP_003525331.1| PREDICTED: beta-amylase 3, chloroplastic-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356513261|ref|XP_003525332.1| PREDICTED: beta-amylase 3, chloroplastic-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449525309|ref|XP_004169660.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 541 | ||||||
| TAIR|locus:2076086 | 575 | BAM1 "beta-amylase 1" [Arabido | 0.809 | 0.761 | 0.491 | 2.4e-115 | |
| TAIR|locus:2130504 | 548 | CT-BMY "chloroplast beta-amyla | 0.809 | 0.799 | 0.468 | 8.1e-108 | |
| TAIR|locus:2127033 | 542 | BAM2 "beta-amylase 2" [Arabido | 0.792 | 0.791 | 0.359 | 5.7e-75 | |
| TAIR|locus:2129810 | 498 | BAM5 "beta-amylase 5" [Arabido | 0.685 | 0.744 | 0.392 | 2.5e-74 | |
| TAIR|locus:2162152 | 531 | BAM4 "beta-amylase 4" [Arabido | 0.792 | 0.807 | 0.374 | 3.2e-72 | |
| TAIR|locus:2062535 | 577 | BAM6 "beta-amylase 6" [Arabido | 0.691 | 0.648 | 0.383 | 6.1e-71 | |
| TAIR|locus:2050720 | 691 | BAM7 "beta-amylase 7" [Arabido | 0.698 | 0.547 | 0.376 | 2.8e-66 | |
| TAIR|locus:2180029 | 536 | BMY3 "beta-amylase 3" [Arabido | 0.761 | 0.768 | 0.332 | 5e-60 | |
| TAIR|locus:2158455 | 689 | BMY2 "beta-amylase 2" [Arabido | 0.617 | 0.484 | 0.377 | 9.6e-57 |
| TAIR|locus:2076086 BAM1 "beta-amylase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1137 (405.3 bits), Expect = 2.4e-115, P = 2.4e-115
Identities = 219/446 (49%), Positives = 284/446 (63%)
Query: 66 GASSQGRRNGSPVFVKLPEDSTMIGGKVKRRKAMAQSFKALXXXXXXXXXXXXXXXXXXR 125
G +G G PVFV +P DS +G V RRKAM S +AL +
Sbjct: 97 GGKKEGG-GGVPVFVMMPLDSVTMGNTVNRRKAMKASLQALKSAGVEGIMIDVWWGLVEK 155
Query: 126 DRPGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDL 185
+ PG Y+W GY +L+ LA GLKV+A+++FHQCG GD +PLPQWV+EE+DKDPDL
Sbjct: 156 ESPGTYNWGGYNELLELAKKLGLKVQAVMSFHQCGGNVGDSVTIPLPQWVVEEVDKDPDL 215
Query: 186 AYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIITGVQVGMG 245
AY+D++GRRN EYISLG D LPVL+GR+P+Q Y DFMR FRD F+ LLG I +QVGMG
Sbjct: 216 AYTDQWGRRNHEYISLGADTLPVLKGRTPVQCYADFMRAFRDNFKHLLGETIVEIQVGMG 275
Query: 246 PAGELRYPSLPSQKLMWSWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASN 305
PAGELRYPS P Q+ +W+ +G FQCYDKY L+SL A A G EWG GP A +
Sbjct: 276 PAGELRYPSYPEQE--GTWKFPGIGAFQCYDKYSLSSLKAAAETYGKPEWGSTGPTDAGH 333
Query: 306 LMQDPEHTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKV 365
PE T+FF+ + G WN+ YG+FFL WYS MLL HGERI A++IF V S K+
Sbjct: 334 YNNWPEDTQFFKKEGGGWNSEYGDFFLSWYSQMLLDHGERILSSAKSIFENMGVKISVKI 393
Query: 366 GGIHWHYGTPSHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNP 425
GIHWHYGT SH ELTAGYYNT RDG+LPIA++ R+ +C EMRD ++ Q +
Sbjct: 394 AGIHWHYGTRSHAPELTAGYYNTRFRDGYLPIAQMLARHNAIFNFTCIEMRDHEQPQ-DA 452
Query: 426 FSSPEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFY----SEGLEKPSFS 481
+PE + Q+ LA E+PL GEN+ DD A +Q++K S +EG + +
Sbjct: 453 LCAPEKLVNQVALATLAAEVPLAGENALPRYDDYAHEQILKASALNLDQNNEGEPREMCA 512
Query: 482 FNFLRMDKNMFEYHNWVRFTRFVRQL 507
F +LRM+ +F+ NW +F FV+++
Sbjct: 513 FTYLRMNPELFQADNWGKFVAFVKKM 538
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| TAIR|locus:2130504 CT-BMY "chloroplast beta-amylase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2127033 BAM2 "beta-amylase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2129810 BAM5 "beta-amylase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2162152 BAM4 "beta-amylase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2062535 BAM6 "beta-amylase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2050720 BAM7 "beta-amylase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2180029 BMY3 "beta-amylase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2158455 BMY2 "beta-amylase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9LIR6 | BAM1_ARATH | 3, ., 2, ., 1, ., 2 | 0.5218 | 0.7911 | 0.7443 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1 | 0.921 |
| 3rd Layer | 3.2.1.2 | 0.914 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00006688001 | SubName- Full=Chromosome chr2 scaffold_176, whole genome shotgun sequence; (542 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 541 | |||
| PLN02803 | 548 | PLN02803, PLN02803, beta-amylase | 0.0 | |
| PLN00197 | 573 | PLN00197, PLN00197, beta-amylase; Provisional | 0.0 | |
| PLN02801 | 517 | PLN02801, PLN02801, beta-amylase | 1e-127 | |
| PLN02161 | 531 | PLN02161, PLN02161, beta-amylase | 1e-110 | |
| PLN02905 | 702 | PLN02905, PLN02905, beta-amylase | 1e-101 | |
| pfam01373 | 399 | pfam01373, Glyco_hydro_14, Glycosyl hydrolase fami | 8e-92 | |
| PLN02705 | 681 | PLN02705, PLN02705, beta-amylase | 1e-78 |
| >gnl|CDD|178400 PLN02803, PLN02803, beta-amylase | Back alignment and domain information |
|---|
Score = 549 bits (1417), Expect = 0.0
Identities = 241/477 (50%), Positives = 306/477 (64%), Gaps = 10/477 (2%)
Query: 34 QTRRLSVSCRLNSSNSLSPADNNNNNRYKLHDGASSQGRRNGS-PVFVKLPEDSTMIGGK 92
Q + +L +P + N KLH + + + PVFV LP D+ +GG
Sbjct: 43 QAKNSMQEAQLTHEEIFTPEGRKSENWEKLHALSGPHSKNDSGVPVFVMLPLDTVTMGGN 102
Query: 93 VKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVYDWRGYFDLIVLASNCGLKVRA 152
+ + +AM S AL +AGVEGV+V+ WWG+VE+D P Y+W GY +L+ + GLK++
Sbjct: 103 LNKPRAMNASLMALRSAGVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQKHGLKLQV 162
Query: 153 LLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRFGRRNMEYISLGCDILPVLRGR 212
+++FHQCG GD +PLP WVLEE+ K+PDL Y+DR GRRN EYISLGCD LPVLRGR
Sbjct: 163 VMSFHQCGGNVGDSCSIPLPPWVLEEMSKNPDLVYTDRSGRRNPEYISLGCDSLPVLRGR 222
Query: 213 SPIQAYTDFMRNFRDTFRPLLGAIITGVQVGMGPAGELRYPSLPSQKLMWSWRSRELGEF 272
+PIQ Y+D+MR+FR+ F+ LG +I +QVGMGP GELRYPS P +WR +GEF
Sbjct: 223 TPIQVYSDYMRSFRERFKDYLGGVIAEIQVGMGPCGELRYPSYPESN--GTWRFPGIGEF 280
Query: 273 QCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEFFRTDNGLWNTAYGNFFL 332
QCYDKYM ASL A A IG ++WG GGP A Q PE T FFR D G WNT YG FFL
Sbjct: 281 QCYDKYMRASLEASAEAIGKKDWGRGGPHDAGEYKQFPEETGFFRRD-GTWNTEYGQFFL 339
Query: 333 EWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHPSELTAGYYNTSTRD 392
EWYSG LL HG+RI AE IF+GT S KV GIHWHY T SH +ELTAGYYNT D
Sbjct: 340 EWYSGKLLEHGDRILAAAEGIFQGTGAKLSGKVAGIHWHYRTRSHAAELTAGYYNTRNHD 399
Query: 393 GFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAARICEIPLEGENS 452
G+LPIAR+F ++G L +C EMRD E+ + SPEG +RQ+ +A R L GEN+
Sbjct: 400 GYLPIARMFSKHGVVLNFTCMEMRD-GEQPEHANCSPEGLVRQVKMATRTAGTELAGENA 458
Query: 453 ATSLDDAAFQQVIKMSKFYS-EGLEKPSFSFNFLRMDKNMFEYHNWVRFTRFVRQLS 508
D AAF QV+ S+ S GL +F +LRM+K +FE NW + FV+ +S
Sbjct: 459 LERYDSAAFAQVVATSRSDSGNGLT----AFTYLRMNKRLFEGDNWRQLVEFVKNMS 511
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Length = 548 |
| >gnl|CDD|215099 PLN00197, PLN00197, beta-amylase; Provisional | Back alignment and domain information |
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| >gnl|CDD|215431 PLN02801, PLN02801, beta-amylase | Back alignment and domain information |
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| >gnl|CDD|177820 PLN02161, PLN02161, beta-amylase | Back alignment and domain information |
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| >gnl|CDD|178493 PLN02905, PLN02905, beta-amylase | Back alignment and domain information |
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| >gnl|CDD|216462 pfam01373, Glyco_hydro_14, Glycosyl hydrolase family 14 | Back alignment and domain information |
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| >gnl|CDD|178307 PLN02705, PLN02705, beta-amylase | Back alignment and domain information |
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Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 541 | |||
| PLN02803 | 548 | beta-amylase | 100.0 | |
| PLN00197 | 573 | beta-amylase; Provisional | 100.0 | |
| PLN02801 | 517 | beta-amylase | 100.0 | |
| PLN02161 | 531 | beta-amylase | 100.0 | |
| PLN02905 | 702 | beta-amylase | 100.0 | |
| PLN02705 | 681 | beta-amylase | 100.0 | |
| PF01373 | 402 | Glyco_hydro_14: Glycosyl hydrolase family 14; Inte | 100.0 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 99.85 | |
| COG1874 | 673 | LacA Beta-galactosidase [Carbohydrate transport an | 99.56 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 98.72 | |
| PLN03059 | 840 | beta-galactosidase; Provisional | 98.38 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 97.97 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 97.79 | |
| PF00232 | 455 | Glyco_hydro_1: Glycosyl hydrolase family 1; InterP | 97.56 | |
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 97.49 | |
| KOG0496 | 649 | consensus Beta-galactosidase [Carbohydrate transpo | 97.31 | |
| PRK15014 | 477 | 6-phospho-beta-glucosidase BglA; Provisional | 97.28 | |
| PRK09852 | 474 | cryptic 6-phospho-beta-glucosidase; Provisional | 97.28 | |
| PRK13511 | 469 | 6-phospho-beta-galactosidase; Provisional | 96.97 | |
| COG3693 | 345 | XynA Beta-1,4-xylanase [Carbohydrate transport and | 96.96 | |
| PLN02814 | 504 | beta-glucosidase | 96.93 | |
| PRK09589 | 476 | celA 6-phospho-beta-glucosidase; Reviewed | 96.92 | |
| PLN02998 | 497 | beta-glucosidase | 96.89 | |
| TIGR01233 | 467 | lacG 6-phospho-beta-galactosidase. This enzyme is | 96.83 | |
| PLN02849 | 503 | beta-glucosidase | 96.82 | |
| PRK09593 | 478 | arb 6-phospho-beta-glucosidase; Reviewed | 96.59 | |
| COG2723 | 460 | BglB Beta-glucosidase/6-phospho-beta-glucosidase/b | 96.53 | |
| PF00331 | 320 | Glyco_hydro_10: Glycosyl hydrolase family 10; Inte | 95.82 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 95.77 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 95.33 | |
| PF01229 | 486 | Glyco_hydro_39: Glycosyl hydrolases family 39; Int | 92.52 | |
| cd03465 | 330 | URO-D_like The URO-D _like protein superfamily inc | 91.5 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 90.86 | |
| KOG0626 | 524 | consensus Beta-glucosidase, lactase phlorizinhydro | 90.53 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 90.32 | |
| PRK02412 | 253 | aroD 3-dehydroquinate dehydratase; Provisional | 89.0 | |
| TIGR01093 | 228 | aroD 3-dehydroquinate dehydratase, type I. Type II | 88.21 | |
| cd00465 | 306 | URO-D_CIMS_like The URO-D_CIMS_like protein superf | 87.41 | |
| cd06593 | 308 | GH31_xylosidase_YicI YicI alpha-xylosidase is a gl | 87.19 | |
| PF10566 | 273 | Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: | 86.93 | |
| PRK11572 | 248 | copper homeostasis protein CutC; Provisional | 85.56 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 85.18 | |
| PF03659 | 386 | Glyco_hydro_71: Glycosyl hydrolase family 71 ; Int | 84.76 | |
| PRK10658 | 665 | putative alpha-glucosidase; Provisional | 84.54 | |
| PRK01060 | 281 | endonuclease IV; Provisional | 83.36 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 83.21 | |
| PF03932 | 201 | CutC: CutC family; InterPro: IPR005627 Copper tran | 83.19 | |
| TIGR01463 | 340 | mtaA_cmuA methyltransferase, MtaA/CmuA family. Thi | 82.22 | |
| cd00502 | 225 | DHQase_I Type I 3-dehydroquinase, (3-dehydroquinat | 81.82 | |
| PF01487 | 224 | DHquinase_I: Type I 3-dehydroquinase; InterPro: IP | 80.71 |
| >PLN02803 beta-amylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-194 Score=1522.48 Aligned_cols=506 Identities=47% Similarity=0.853 Sum_probs=459.6
Q ss_pred ccccccceecccCcCCCCCCCccccccccCccc-ccccccccccCCCCCCCCC-----CCCCccccccCCCC-CCCCCCc
Q 009162 4 ATFAPSFCCTRTEPTQLPRFRLTHSHKLQSQTR-RLSVSCRLNSSNSLSPADN-----NNNNRYKLHDGASS-QGRRNGS 76 (541)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~v 76 (541)
.++.+.+||+....+.+. +|+..++.. |++.+..+++......+.. ......+.+++... .+..++|
T Consensus 13 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 86 (548)
T PLN02803 13 SPKDTKSLKTPDDFSGTI------CFAPIKPSCYRLQAKNSMQEAQLTHEEIFTPEGRKSENWEKLHALSGPHSKNDSGV 86 (548)
T ss_pred CCcccccccccccccccc------cccCCCCcccccccccccchhhcccCcccCccccccccccccccccCcccccCCce
Confidence 356667777776666544 444444433 4444555554333333221 11112234443333 4678899
Q ss_pred ceEEeeecceeccCCeecCHHHHHHHHHHHHHcCcceEEEeEEeeecccCCCcccccchHHHHHHHHHhCCCcEEEEEee
Q 009162 77 PVFVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVYDWRGYFDLIVLASNCGLKVRALLAF 156 (541)
Q Consensus 77 pv~VMlPLd~V~~~~~~~~~~~~~~~L~~LK~~GVdGV~vdVWWGiVE~~~p~~YdWs~Y~~l~~mv~~~GLKv~~vmsF 156 (541)
|||||||||+|+++|+++++++|+++|++||++||||||||||||+||+++|++|||++|++||+|||++||||||||||
T Consensus 87 pvyVMlPLd~V~~~~~~~~~~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~p~~YdWsgY~~l~~mvr~~GLKlq~vmSF 166 (548)
T PLN02803 87 PVFVMLPLDTVTMGGNLNKPRAMNASLMALRSAGVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQKHGLKLQVVMSF 166 (548)
T ss_pred eEEEEeecceeccCCcccCHHHHHHHHHHHHHcCCCEEEEEeeeeeeccCCCCcCCcHHHHHHHHHHHHcCCeEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCcCCCChhhHhhhhcCCCceeeCCCCCccccceecccCcccccCCCCchHHHHHHHHHHHHHHhhhhcCc
Q 009162 157 HQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAI 236 (541)
Q Consensus 157 HqCGGNVGD~~~IpLP~WV~~~g~~~pdi~ytD~~G~rn~E~LSlg~D~~pv~~GRTpiq~Y~dfm~sF~~~f~~~~g~~ 236 (541)
|||||||||+|+||||+||++++++||||+||||+|+||+||||||||++|||+||||+|+|+|||+|||++|++|++++
T Consensus 167 HqCGGNVGD~~~IpLP~WV~e~~~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~l~~~ 246 (548)
T PLN02803 167 HQCGGNVGDSCSIPLPPWVLEEMSKNPDLVYTDRSGRRNPEYISLGCDSLPVLRGRTPIQVYSDYMRSFRERFKDYLGGV 246 (548)
T ss_pred cccCCCCCCcccccCCHHHHHhhhcCCCceEecCCCCcccceeccccccchhccCCCHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEecccCCCcCCCCCCCCCCCCCcccCCCCcccccccHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCCCcc
Q 009162 237 ITGVQVGMGPAGELRYPSLPSQKLMWSWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEFF 316 (541)
Q Consensus 237 I~eI~VGlGP~GELRYPSyp~~~g~W~~~~pgiGeFQCYDky~~~~l~~~a~~~gn~~WG~~gP~~ag~Yn~~P~~t~FF 316 (541)
|+||+|||||||||||||||+..|+|+| |||||||||||||+++||++|+++|||+||++||+|+|+||++|++|+||
T Consensus 247 I~eI~VGlGP~GELRYPSYp~~~g~w~f--PGiGEFQCYDky~l~~L~~aA~~~G~p~WG~~gP~dAg~Yn~~P~~t~FF 324 (548)
T PLN02803 247 IAEIQVGMGPCGELRYPSYPESNGTWRF--PGIGEFQCYDKYMRASLEASAEAIGKKDWGRGGPHDAGEYKQFPEETGFF 324 (548)
T ss_pred eEEEEeccccCccccCCCCcCcCCCccC--CCccceeeccHHHHHHHHHHHHHhCCHhhccCCCCCcCcCCCCCCCCCCC
Confidence 9999999999999999999999888999 99999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceEEEEEcceeccCCCCCChhhhcccccCCCCCCChHH
Q 009162 317 RTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHPSELTAGYYNTSTRDGFLP 396 (541)
Q Consensus 317 ~~~~g~~~s~YGrFFL~WYs~~Li~HgdrIL~~A~~~F~~~~v~l~aKV~GIHWwy~t~SHaAElTAGyYNt~~rdGY~~ 396 (541)
++ +|+|+|+||||||+|||++|++||||||+.|+.+|++++|+|++|||||||||+|+||||||||||||+++||||.|
T Consensus 325 ~~-~G~~~S~YG~FFL~WYs~~Ll~HgdrvL~~A~~~F~g~~v~l~aKv~GIHWwY~t~SHaAElTAGyYNt~~rdGY~~ 403 (548)
T PLN02803 325 RR-DGTWNTEYGQFFLEWYSGKLLEHGDRILAAAEGIFQGTGAKLSGKVAGIHWHYRTRSHAAELTAGYYNTRNHDGYLP 403 (548)
T ss_pred CC-CCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCceEEEEeceeeeecCCCCchhhhccccccCCCcccHHH
Confidence 97 58999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCcEEEEeecccccCCcCCCCCCCChHHHHHHHHHHHHHcCCCeecccCccccChHHHHHHHHhhcccCCCCC
Q 009162 397 IARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLE 476 (541)
Q Consensus 397 Ia~mf~rh~~~l~fTClEM~d~eqp~~~~~s~Pe~Lv~QV~~aa~~~Gv~~~GENAL~~~d~~~~~qi~~~~~~~~~~~~ 476 (541)
||+|||||||+|+||||||+|.+|| ++++|+||+||+||+++|+++||+|+|||||++||.++|+||++++++.. .
T Consensus 404 Ia~mf~rh~~~l~FTClEM~D~eqp-~~~~s~Pe~Lv~Qv~~aa~~~Gv~~aGENAL~~~d~~~~~qi~~~~~~~~---~ 479 (548)
T PLN02803 404 IARMFSKHGVVLNFTCMEMRDGEQP-EHANCSPEGLVRQVKMATRTAGTELAGENALERYDSAAFAQVVATSRSDS---G 479 (548)
T ss_pred HHHHHHHcCCeEEEEecCcccCCCC-ccccCCHHHHHHHHHHHHHHcCCceeeeccccccCHHHHHHHHHhhcccc---c
Confidence 9999999999999999999999999 79999999999999999999999999999999999999999999987533 1
Q ss_pred CCcceeeEecCCccccCCcChHHHHHHHHHhhCCcc--ccccccccCC
Q 009162 477 KPSFSFNFLRMDKNMFEYHNWVRFTRFVRQLSGSSI--FRAKLDFRGD 522 (541)
Q Consensus 477 ~~~~~FTylRm~~~lf~~~n~~~F~~FVr~m~~~~~--~~~~~~~~~~ 522 (541)
.+|++||||||+++||+++||++|++|||+||++++ .+++++.++.
T Consensus 480 ~~~~~FTyLRm~~~lf~~~n~~~F~~FVr~M~~~~~~~~~~~~~~~~~ 527 (548)
T PLN02803 480 NGLTAFTYLRMNKRLFEGDNWRQLVEFVKNMSEGGRNRRLPECDTEGS 527 (548)
T ss_pred CceeeeEEecCChHHcChhhHHHHHHHHHHhcCccccCccchhhccCc
Confidence 368899999999999999999999999999999876 4667777654
|
|
| >PLN00197 beta-amylase; Provisional | Back alignment and domain information |
|---|
| >PLN02801 beta-amylase | Back alignment and domain information |
|---|
| >PLN02161 beta-amylase | Back alignment and domain information |
|---|
| >PLN02905 beta-amylase | Back alignment and domain information |
|---|
| >PLN02705 beta-amylase | Back alignment and domain information |
|---|
| >PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PLN03059 beta-galactosidase; Provisional | Back alignment and domain information |
|---|
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
| >PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK15014 6-phospho-beta-glucosidase BglA; Provisional | Back alignment and domain information |
|---|
| >PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional | Back alignment and domain information |
|---|
| >PRK13511 6-phospho-beta-galactosidase; Provisional | Back alignment and domain information |
|---|
| >COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02814 beta-glucosidase | Back alignment and domain information |
|---|
| >PRK09589 celA 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
| >PLN02998 beta-glucosidase | Back alignment and domain information |
|---|
| >TIGR01233 lacG 6-phospho-beta-galactosidase | Back alignment and domain information |
|---|
| >PLN02849 beta-glucosidase | Back alignment and domain information |
|---|
| >PRK09593 arb 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
| >COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
| >PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >cd03465 URO-D_like The URO-D _like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases | Back alignment and domain information |
|---|
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
| >PRK02412 aroD 3-dehydroquinate dehydratase; Provisional | Back alignment and domain information |
|---|
| >TIGR01093 aroD 3-dehydroquinate dehydratase, type I | Back alignment and domain information |
|---|
| >cd00465 URO-D_CIMS_like The URO-D_CIMS_like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases, as well as cobalamine (B12) independent methionine synthases | Back alignment and domain information |
|---|
| >cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose | Back alignment and domain information |
|---|
| >PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK11572 copper homeostasis protein CutC; Provisional | Back alignment and domain information |
|---|
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
| >PF03659 Glyco_hydro_71: Glycosyl hydrolase family 71 ; InterPro: IPR005197 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK10658 putative alpha-glucosidase; Provisional | Back alignment and domain information |
|---|
| >PRK01060 endonuclease IV; Provisional | Back alignment and domain information |
|---|
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF03932 CutC: CutC family; InterPro: IPR005627 Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF | Back alignment and domain information |
|---|
| >TIGR01463 mtaA_cmuA methyltransferase, MtaA/CmuA family | Back alignment and domain information |
|---|
| >cd00502 DHQase_I Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase | Back alignment and domain information |
|---|
| >PF01487 DHquinase_I: Type I 3-dehydroquinase; InterPro: IPR001381 3-dehydroquinate dehydratase (4 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 541 | ||||
| 1fa2_A | 498 | Crystal Structure Of Beta-Amylase From Sweet Potato | 5e-84 | ||
| 1b1y_A | 500 | Sevenfold Mutant Of Barley Beta-Amylase Length = 50 | 2e-81 | ||
| 2xff_A | 535 | Crystal Structure Of Barley Beta-Amylase Complexed | 3e-81 | ||
| 1wdr_A | 495 | The Role Of An Inner Loop In The Catalytic Mechanis | 3e-79 | ||
| 1btc_A | 491 | Three-Dimensional Structure Of Soybean Beta-Amylase | 4e-79 | ||
| 1bya_A | 495 | Crystal Structures Of Soybean Beta-Amylase Reacted | 4e-79 | ||
| 1q6g_A | 495 | Crystal Structure Of Soybean Beta-Amylase Mutant (N | 4e-79 | ||
| 1q6c_A | 495 | Crystal Structure Of Soybean Beta-Amylase Complexed | 6e-79 | ||
| 1q6d_A | 495 | Crystal Structure Of Soybean Beta-Amylase Mutant (M | 6e-79 | ||
| 1wds_A | 495 | The Role Of An Inner Loop In The Catalytic Mechanis | 7e-79 | ||
| 2dqx_A | 495 | Mutant Beta-Amylase (W55r) From Soy Bean Length = 4 | 1e-78 | ||
| 1v3h_A | 495 | The Roles Of Glu186 And Glu380 In The Catalytic Rea | 1e-78 | ||
| 1v3i_A | 495 | The Roles Of Glu186 And Glu380 In The Catalytic Rea | 1e-78 | ||
| 1wdq_A | 495 | The Role Of An Inner Loop In The Catalytic Mechanis | 1e-78 | ||
| 1q6e_A | 495 | Crystal Structure Of Soybean Beta-Amylase Mutant (E | 1e-78 | ||
| 1ukp_A | 495 | Crystal Structure Of Soybean Beta-Amylase Mutant Su | 2e-78 | ||
| 1uko_A | 495 | Crystal Structure Of Soybean Beta-Amylase Mutant Su | 2e-78 | ||
| 1ven_A | 516 | Crystal Structure Analysis Of Y164eMALTOSE OF BACIL | 2e-24 | ||
| 1vep_A | 516 | Crystal Structure Analysis Of Triple (T47mY164ET328 | 2e-24 | ||
| 1b90_A | 516 | Bacillus Cereus Beta-Amylase Apo Form Length = 516 | 4e-24 | ||
| 1veo_A | 516 | Crystal Structure Analysis Of Y164fMALTOSE OF BACIL | 7e-24 | ||
| 1itc_A | 516 | Beta-amylase From Bacillus Cereus Var. Mycoides Com | 2e-23 | ||
| 3voc_A | 419 | Crystal Structure Of The Catalytic Domain Of Beta-a | 2e-22 |
| >pdb|1FA2|A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato Length = 498 | Back alignment and structure |
|
| >pdb|1B1Y|A Chain A, Sevenfold Mutant Of Barley Beta-Amylase Length = 500 | Back alignment and structure |
| >pdb|2XFF|A Chain A, Crystal Structure Of Barley Beta-Amylase Complexed With Acarbose Length = 535 | Back alignment and structure |
| >pdb|1WDR|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase Length = 495 | Back alignment and structure |
| >pdb|1BTC|A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase Determined At 3.0 Angstroms Resolution: Preliminary Chain Tracing Of The Complex With Alpha-Cyclodextrin Length = 491 | Back alignment and structure |
| >pdb|1BYA|A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis Length = 495 | Back alignment and structure |
| >pdb|1Q6G|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum Length = 495 | Back alignment and structure |
| >pdb|1Q6C|A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose Length = 495 | Back alignment and structure |
| >pdb|1Q6D|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum Length = 495 | Back alignment and structure |
| >pdb|1WDS|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase Length = 495 | Back alignment and structure |
| >pdb|2DQX|A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean Length = 495 | Back alignment and structure |
| >pdb|1V3H|A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase Length = 495 | Back alignment and structure |
| >pdb|1V3I|A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase Length = 495 | Back alignment and structure |
| >pdb|1WDQ|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase Length = 495 | Back alignment and structure |
| >pdb|1Q6E|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (E178y) With Increased Ph Optimum At Ph 5.4 Length = 495 | Back alignment and structure |
| >pdb|1UKP|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region Length = 495 | Back alignment and structure |
| >pdb|1UKO|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region Length = 495 | Back alignment and structure |
| >pdb|1VEN|A Chain A, Crystal Structure Analysis Of Y164eMALTOSE OF BACILUS Cereus Beta-Amylase At Ph 4.6 Length = 516 | Back alignment and structure |
| >pdb|1VEP|A Chain A, Crystal Structure Analysis Of Triple (T47mY164ET328N) MALTOSE OF BACILLUS CEREUS BETA-Amylase At Ph 6.5 Length = 516 | Back alignment and structure |
| >pdb|1B90|A Chain A, Bacillus Cereus Beta-Amylase Apo Form Length = 516 | Back alignment and structure |
| >pdb|1VEO|A Chain A, Crystal Structure Analysis Of Y164fMALTOSE OF BACILLUS Cereus Beta-Amylase At Ph 4.6 Length = 516 | Back alignment and structure |
| >pdb|1ITC|A Chain A, Beta-amylase From Bacillus Cereus Var. Mycoides Complexed With Maltopentaose Length = 516 | Back alignment and structure |
| >pdb|3VOC|A Chain A, Crystal Structure Of The Catalytic Domain Of Beta-amylase From Paenibacillus Polymyxa Length = 419 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* Length = 535 | Back alignment and structure |
|---|
Score = 533 bits (1374), Expect = 0.0
Identities = 172/463 (37%), Positives = 254/463 (54%), Gaps = 12/463 (2%)
Query: 72 RRNGSPVFVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVY 131
+ N V+V LP D+ + + ++ + + L AGV+GV+V+VWWG+VE P Y
Sbjct: 6 KGNYVQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAY 65
Query: 132 DWRGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRF 191
DW Y L L GLK++A+++FHQCG GD +P+PQWV + +DPD+ Y+D
Sbjct: 66 DWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVRDVGTRDPDIFYTDGH 125
Query: 192 GRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLL-GAIITGVQVGMGPAGEL 250
G RN+EY++LG D P+ GRS +Q Y D+M +FR+ + L +I ++VG+GPAGE+
Sbjct: 126 GTRNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENMKEFLDAGVIVDIEVGLGPAGEM 185
Query: 251 RYPSLPSQKLMWSWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDP 310
RYPS P W +GEF CYDKY+ A A A +G EW P P
Sbjct: 186 RYPSYPQSH---GWSFPGIGEFICYDKYLQADFKAAAAAVGHPEW--EFPNDVGQYNDTP 240
Query: 311 EHTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHW 370
E T+FFR DNG + + G FFL WYS L+ HG+RI EA +F G +V + K+ GIHW
Sbjct: 241 ERTQFFR-DNGTYLSEKGRFFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKISGIHW 299
Query: 371 HYGTPSHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPE 430
Y PSH +ELTAGYYN RDG+ IAR+ R+ ++ +C EMRD ++ S+PE
Sbjct: 300 WYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQSS-QAMSAPE 358
Query: 431 GFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKPS----FSFNFLR 486
++Q+L A + + EN+ D A+ +++ ++ + P F F +LR
Sbjct: 359 ELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFGFTYLR 418
Query: 487 MDKNMFEYHNWVRFTRFVRQLSGSSIFRAKLDFRGDIRPSSAS 529
+ + E N+ F FV ++ + +D + S
Sbjct: 419 LSNQLVEGQNYANFKTFVDRMHANLPRDPYVDPMAPLPRSGPE 461
|
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* Length = 495 | Back alignment and structure |
|---|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 Length = 498 | Back alignment and structure |
|---|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A Length = 516 | Back alignment and structure |
|---|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Length = 552 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 541 | |||
| 1wdp_A | 495 | Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 | 100.0 | |
| 1fa2_A | 498 | Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 | 100.0 | |
| 2xfr_A | 535 | Beta-amylase; hydrolase, carbohydrate metabolism, | 100.0 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 100.0 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 99.79 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 99.69 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 99.55 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 99.36 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 99.1 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 99.04 | |
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 99.04 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 98.92 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 98.43 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 98.35 | |
| 3ahx_A | 453 | Beta-glucosidase A; cellulases, glycosyl hydrolase | 98.34 | |
| 3apg_A | 473 | Beta-glucosidase; TIM barrel, hydrolase, sugar bin | 98.32 | |
| 1qox_A | 449 | Beta-glucosidase; hydrolase, cellulose degradation | 98.31 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 98.29 | |
| 3fj0_A | 465 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase | 98.28 | |
| 1e4i_A | 447 | Beta-glucosidase; hydrolase, family 1 glycosyl hyd | 98.24 | |
| 2dga_A | 565 | Beta-glucosidase; alpha/beta barrel, hydrolase; 1. | 98.21 | |
| 1cbg_A | 490 | Cyanogenic beta-glucosidase; hydrolase (O-glycosyl | 98.19 | |
| 2j78_A | 468 | Beta-glucosidase A; family 1, hydrolase, inhibitor | 98.17 | |
| 1qvb_A | 481 | Beta-glycosidase; TIM-barrel, thermostable, hydrol | 98.17 | |
| 2e9l_A | 469 | Cytosolic beta-glucosidase; novel cytosolic neutra | 98.16 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 98.15 | |
| 1v02_A | 565 | Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri | 98.14 | |
| 1v08_A | 512 | Beta-glucosidase; glycoside hydrolase, dimboa-gluc | 98.14 | |
| 2jf7_A | 532 | Strictosidine-O-beta-D-glucosidase; alkaloid, hydr | 98.13 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 98.13 | |
| 2e3z_A | 465 | Beta-glucosidase; TIM barrel, glycoside hydrolase | 98.13 | |
| 1wcg_A | 464 | Thioglucosidase, myrosinase; aphid, beta-glucosida | 98.1 | |
| 2o9p_A | 454 | Beta-glucosidase B; family 1 glycoside hydrolase; | 98.1 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 98.09 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 98.09 | |
| 1ug6_A | 431 | Beta-glycosidase; glucosidase, atomic resolution, | 98.08 | |
| 1e4m_M | 501 | Myrosinase MA1; hydrolase, family 1 glycosyl hydro | 98.07 | |
| 3ahy_A | 473 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 98.07 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 98.06 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 98.02 | |
| 1pbg_A | 468 | PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g | 98.0 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 97.93 | |
| 4b3l_A | 479 | Beta-glucosidase; hydrolase, glycosidase, carbohyd | 97.93 | |
| 4hz8_A | 444 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba | 97.91 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 97.91 | |
| 3f5l_A | 481 | Beta-glucosidase; beta-alpha-barrels, glycosidase, | 97.85 | |
| 1gnx_A | 479 | Beta-glucosidase; hydrolase, glycosyltransferase, | 97.83 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 97.76 | |
| 3gnp_A | 488 | OS03G0212800 protein; beta-alpha barrel, glycosida | 97.72 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 97.7 | |
| 2xhy_A | 479 | BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, | 97.7 | |
| 3ta9_A | 458 | Glycoside hydrolase family 1; TIM barrel, glucosid | 97.65 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 97.61 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 97.58 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 97.57 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 97.56 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 97.55 | |
| 4atd_A | 513 | Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr | 97.55 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 97.54 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 97.5 | |
| 3vii_A | 487 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 97.49 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 97.47 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 97.43 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 97.42 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 97.42 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 97.4 | |
| 1uhv_A | 500 | Beta-xylosidase; family 39 glycoside hydrolase, xy | 97.37 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 97.36 | |
| 3qom_A | 481 | 6-phospho-beta-glucosidase; structural genomics, P | 97.33 | |
| 3ptm_A | 505 | Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly | 97.32 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 97.31 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 97.27 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 97.26 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 97.24 | |
| 4dde_A | 480 | 6-phospho-beta-glucosidase; structural genomics, P | 97.19 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 97.18 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 97.16 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 97.14 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 97.1 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 97.03 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 96.98 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 96.89 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 96.83 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 96.8 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 96.76 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 96.75 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 96.69 | |
| 4a3y_A | 540 | Raucaffricine-O-beta-D-glucosidase; hydrolase, alk | 96.66 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 96.57 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 96.56 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 96.54 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 96.52 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 96.48 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 96.39 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 96.32 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 96.31 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 96.29 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 95.9 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 95.75 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 95.67 | |
| 3ro8_A | 341 | Endo-1,4-beta-xylanase; glycosyl hydrolase family | 95.55 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 95.55 | |
| 4ha4_A | 489 | Beta-galactosidase; TIM barrel, beta-glycosidase, | 95.39 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 95.33 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 95.3 | |
| 1uwi_A | 489 | Beta-galactosidase; hydrolase, beta-glycosidase, g | 95.1 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 95.02 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 93.55 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 93.33 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 92.96 | |
| 4h41_A | 340 | Putative alpha-L-fucosidase; hydrolase, carbohydra | 92.93 | |
| 2yfo_A | 720 | Alpha-galactosidase-sucrose kinase agask; hydrolas | 91.34 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 90.92 | |
| 4acy_A | 382 | Endo-alpha-mannosidase; hydrolase, endomannosidase | 90.26 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 89.12 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 88.77 | |
| 4ad1_A | 380 | Glycosyl hydrolase family 71; glycoside hydrolase | 88.14 | |
| 2xn2_A | 732 | Alpha-galactosidase; hydrolase, glycosidase; HET: | 87.12 | |
| 1zy9_A | 564 | Alpha-galactosidase; TM1192, struc genomics, joint | 86.73 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 86.67 | |
| 1twd_A | 256 | Copper homeostasis protein CUTC; TIM-like protein, | 85.98 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 85.94 | |
| 2bdq_A | 224 | Copper homeostasis protein CUTC; alpha beta protei | 85.39 | |
| 3mi6_A | 745 | Alpha-galactosidase; NESG, structural genomics, PS | 85.19 | |
| 2w5f_A | 540 | Endo-1,4-beta-xylanase Y; cellulosome, glycosidase | 84.94 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 84.89 | |
| 1uas_A | 362 | Alpha-galactosidase; TIM-barrel, beta-alpha-barrel | 84.16 | |
| 3o1n_A | 276 | 3-dehydroquinate dehydratase; structural genomics, | 83.56 | |
| 3a5v_A | 397 | Alpha-galactosidase; beta/alpha barrel, N-glycosyl | 83.47 | |
| 3a24_A | 641 | Alpha-galactosidase; glycoside hydrolase family 97 | 83.25 | |
| 2y2w_A | 574 | Arabinofuranosidase; hydrolase, arabinoxylan, glyc | 82.59 | |
| 3tva_A | 290 | Xylose isomerase domain protein TIM barrel; struct | 82.33 | |
| 3nvt_A | 385 | 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; | 81.4 | |
| 1j93_A | 353 | UROD, uroporphyrinogen decarboxylase; beta barrel, | 81.04 | |
| 4fnq_A | 729 | Alpha-galactosidase AGAB; glycoside hydrolase, hyd | 80.53 | |
| 2d73_A | 738 | Alpha-glucosidase SUSB; glycoside hydrolase family | 80.36 |
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-187 Score=1463.77 Aligned_cols=440 Identities=38% Similarity=0.763 Sum_probs=426.3
Q ss_pred CCCCcceEEeeecceeccCCeecCHHHHHHHHHHHHHcCcceEEEeEEeeecccCCCcccccchHHHHHHHHHhCCCcEE
Q 009162 72 RRNGSPVFVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVYDWRGYFDLIVLASNCGLKVR 151 (541)
Q Consensus 72 ~~~~vpv~VMlPLd~V~~~~~~~~~~~~~~~L~~LK~~GVdGV~vdVWWGiVE~~~p~~YdWs~Y~~l~~mv~~~GLKv~ 151 (541)
..++||||||||||+|+++|+|+++++++++|++||++||||||||||||+||+++|++|||++|++|++|||++|||||
T Consensus 8 ~~~~vpv~VMlPLd~V~~~~~~~~~~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~l~~mv~~~GLKlq 87 (495)
T 1wdp_A 8 LLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQECGLTLQ 87 (495)
T ss_dssp HTTCCCEEEECCTTSBCTTSCBCCHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEE
T ss_pred cCCCccEEEeeecceecCCCeeCCHHHHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeEE
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeecCCCCCCCCCcCCCChhhHhhhhcCCCceeeCCCCCccccceecccCcccccCCCCchHHHHHHHHHHHHHHhh
Q 009162 152 ALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRP 231 (541)
Q Consensus 152 ~vmsFHqCGGNVGD~~~IpLP~WV~~~g~~~pdi~ytD~~G~rn~E~LSlg~D~~pv~~GRTpiq~Y~dfm~sF~~~f~~ 231 (541)
||||||||||||||+|+||||+||++++++||||+||||+|+||+||||||||++|||+||||+|+|+|||+|||++|++
T Consensus 88 ~vmSFHqCGgNVGD~~~IPLP~WV~~~~~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~Dfm~SFr~~F~~ 167 (495)
T 1wdp_A 88 AIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSD 167 (495)
T ss_dssp EEEECSCBCCSTTCSCCBCSCHHHHHHHHHCGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHHTHH
T ss_pred EEEEeeecCCCCCCcccccCCHHHHHhhccCCCcEEECCCCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-cCceeEEEecccCCCcCCCCCCCCCCCCCcccCCCCcccccccHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCC
Q 009162 232 LL-GAIITGVQVGMGPAGELRYPSLPSQKLMWSWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDP 310 (541)
Q Consensus 232 ~~-g~~I~eI~VGlGP~GELRYPSyp~~~g~W~~~~pgiGeFQCYDky~~~~l~~~a~~~gn~~WG~~gP~~ag~Yn~~P 310 (541)
|+ +++|+||+|||||||||||||||+.+| |+| |||||||||||||+++||++|+++||++||+ |+|+++||++|
T Consensus 168 ~~~~~~I~eI~VGlGP~GELRYPSYp~~~g-W~f--PGiGEFQCYDky~~~~Lk~aA~~~G~~~WG~--P~dag~yn~~P 242 (495)
T 1wdp_A 168 FLESGLIIDIEVGLGPAGELRYPSYPQSQG-WEF--PGIGEFQCYDKYLKADFKAAVARAGHPEWEL--PDDAGKYNDVP 242 (495)
T ss_dssp HHHTTCEEEEEECCSGGGBSSCCCSCGGGT-CCT--TCCCCCCCCSHHHHHHHHHHHHHTTCTTCCS--CSSSCCTTCCG
T ss_pred hccCCeeEEEEeCccccccccCCCCccccC-CCC--CCcceeeechHHHHHHHHHHHHHhCchhhCC--CCCCCccCCCC
Confidence 99 889999999999999999999999885 999 9999999999999999999999999999997 99999999999
Q ss_pred CCCCcccCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceEEEEEcceeccCCCCCChhhhcccccCCCC
Q 009162 311 EHTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHPSELTAGYYNTST 390 (541)
Q Consensus 311 ~~t~FF~~~~g~~~s~YGrFFL~WYs~~Li~HgdrIL~~A~~~F~~~~v~l~aKV~GIHWwy~t~SHaAElTAGyYNt~~ 390 (541)
++|+||+++ |+|+|+||||||+|||++|++||||||++|+++|++++|+|++|||||||||+|+|||||||||||||++
T Consensus 243 ~~t~FF~~~-G~w~s~YGkFFL~WYs~~Ll~HgdrvL~~A~~~F~~~~v~l~~KV~GIHWwY~t~SHaAELTAGyYNt~~ 321 (495)
T 1wdp_A 243 ESTGFFKSN-GTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLND 321 (495)
T ss_dssp GGSTTTSTT-SGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEECCCCCTTTTSTTCHHHHHHTCCCBTT
T ss_pred CCCCCcCCC-CcccchhhhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeceeeeccCCCCChHHhhcccccCCC
Confidence 999999984 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHhhcCcEEEEeecccccCCcCCCCCCCChHHHHHHHHHHHHHcCCCeecccCccccChHHHHHHHHhhcc
Q 009162 391 RDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKF 470 (541)
Q Consensus 391 rdGY~~Ia~mf~rh~~~l~fTClEM~d~eqp~~~~~s~Pe~Lv~QV~~aa~~~Gv~~~GENAL~~~d~~~~~qi~~~~~~ 470 (541)
||||.|||+|||||||+|+||||||+|.||| ++++|+||+||+||+++|+++||+|+|||||+|||.++|+||++++++
T Consensus 322 rdGY~~Ia~m~~rh~~~l~fTC~EM~d~eq~-~~~~s~Pe~Lv~QV~~aa~~~Gv~~aGENAL~~~d~~a~~qI~~~~~~ 400 (495)
T 1wdp_A 322 RDGYRPIARMLSRHHAILNFTCLEMRDSEQP-SDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNARP 400 (495)
T ss_dssp BCSSHHHHHHHHTTTCEEEECCTTCCGGGSC-GGGCCCHHHHHHHHHHHHHHTTCCEEEECSSCCCSHHHHHHHHHHHST
T ss_pred CCchHHHHHHHHHcCCeEEEEecCCCcCCCC-cccCCCHHHHHHHHHHHHHHhCCceeccccccccCHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999 799999999999999999999999999999999999999999999986
Q ss_pred cC----CCCCCCcceeeEecCCccccCCcChHHHHHHHHHhhCCcccccccc
Q 009162 471 YS----EGLEKPSFSFNFLRMDKNMFEYHNWVRFTRFVRQLSGSSIFRAKLD 518 (541)
Q Consensus 471 ~~----~~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~m~~~~~~~~~~~ 518 (541)
+. ++...++++||||||++.||+++||++|++|||+||++.++.++.+
T Consensus 401 ~~~~~~~~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~m~~~~~~~~~~~ 452 (495)
T 1wdp_A 401 QGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHADQDYCANPQ 452 (495)
T ss_dssp TCCCTTSSCSSCCSEEEESCCCHHHHSHHHHHHHHHHHHHHTTTCCCCSCGG
T ss_pred ccccccCCccCceeeEEEecCChhhCCchhHHHHHHHHHHHhcCCCcCcCch
Confidence 43 2344679999999999999999999999999999999988654443
|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 | Back alignment and structure |
|---|
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* | Back alignment and structure |
|---|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} | Back alignment and structure |
|---|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
| >3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} | Back alignment and structure |
|---|
| >3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} | Back alignment and structure |
|---|
| >1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
| >1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* | Back alignment and structure |
|---|
| >2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* | Back alignment and structure |
|---|
| >1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... | Back alignment and structure |
|---|
| >1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* | Back alignment and structure |
|---|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
| >1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* | Back alignment and structure |
|---|
| >1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A | Back alignment and structure |
|---|
| >2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A | Back alignment and structure |
|---|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
| >2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* | Back alignment and structure |
|---|
| >1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* | Back alignment and structure |
|---|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A | Back alignment and structure |
|---|
| >1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* | Back alignment and structure |
|---|
| >3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} | Back alignment and structure |
|---|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* | Back alignment and structure |
|---|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
| >4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A | Back alignment and structure |
|---|
| >4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* | Back alignment and structure |
|---|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* | Back alignment and structure |
|---|
| >1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A | Back alignment and structure |
|---|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
| >3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* | Back alignment and structure |
|---|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
| >2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
| >3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} | Back alignment and structure |
|---|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
| >4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
|---|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
| >3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* | Back alignment and structure |
|---|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A | Back alignment and structure |
|---|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
| >3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A | Back alignment and structure |
|---|
| >3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* | Back alignment and structure |
|---|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* | Back alignment and structure |
|---|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
| >4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
| >3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A | Back alignment and structure |
|---|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
| >4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A | Back alignment and structure |
|---|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
| >1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A | Back alignment and structure |
|---|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
| >4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* | Back alignment and structure |
|---|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
| >4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B | Back alignment and structure |
|---|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
| >4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A* | Back alignment and structure |
|---|
| >2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* | Back alignment and structure |
|---|
| >1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 | Back alignment and structure |
|---|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
| >1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A | Back alignment and structure |
|---|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae} | Back alignment and structure |
|---|
| >3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} | Back alignment and structure |
|---|
| >2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* | Back alignment and structure |
|---|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
| >1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A* | Back alignment and structure |
|---|
| >3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} | Back alignment and structure |
|---|
| >3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} | Back alignment and structure |
|---|
| >3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus} | Back alignment and structure |
|---|
| >3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A* | Back alignment and structure |
|---|
| >1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1 | Back alignment and structure |
|---|
| >4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* | Back alignment and structure |
|---|
| >2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 541 | ||||
| d1b1ya_ | 500 | c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare | 0.0 | |
| d1fa2a_ | 498 | c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea b | 0.0 | |
| d1wdpa1 | 490 | c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine m | 0.0 | |
| d1vema2 | 417 | c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus | 1e-154 |
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 500 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Barley (Hordeum vulgare) [TaxId: 4513]
Score = 589 bits (1520), Expect = 0.0
Identities = 172/441 (39%), Positives = 251/441 (56%), Gaps = 12/441 (2%)
Query: 74 NGSPVFVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVYDW 133
N V+V LP D+ + + ++ + + L AGV+GV+V+VWWG+VE P YDW
Sbjct: 4 NYVQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDW 63
Query: 134 RGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRFGR 193
Y L L GLK++A+++FHQCG GD +P+PQWV + +DPD+ Y+D G
Sbjct: 64 SAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVRDVGTRDPDIFYTDGHGT 123
Query: 194 RNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLL-GAIITGVQVGMGPAGELRY 252
RN+EY++LG D P+ GRS +Q Y D+M +FR+ + L +I ++VG+GPAGELRY
Sbjct: 124 RNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENMKDFLDAGVIVDIEVGLGPAGELRY 183
Query: 253 PSLPSQKLMWSWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEH 312
PS P W +GEF CYDKY+ A A A +G EW P A PE
Sbjct: 184 PSYPQSH---GWSFPGIGEFICYDKYLQADFKAAAAAVGHPEW--EFPNDAGQYNDTPER 238
Query: 313 TEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHY 372
T+FFR DNG + + G FFL WYS L+ HG+RI EA +F G +V + K+ G+HW Y
Sbjct: 239 TQFFR-DNGTYLSEKGRFFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKIAGVHWWY 297
Query: 373 GTPSHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGF 432
PSH +ELTAGYYN RDG+ IAR+ R+ ++ +C EMRD ++ + S+PE
Sbjct: 298 KVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQPP-DAMSAPEEL 356
Query: 433 LRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKPS----FSFNFLRMD 488
++Q+L A + + EN+ D A+ +++ ++ + P F F +LR+
Sbjct: 357 VQQVLSAGWREGLNVSCENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFGFTYLRLS 416
Query: 489 KNMFEYHNWVRFTRFVRQLSG 509
+ E N+V F FV ++
Sbjct: 417 NQLVEGQNYVNFKTFVDRMHA 437
|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 498 | Back information, alignment and structure |
|---|
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} Length = 490 | Back information, alignment and structure |
|---|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} Length = 417 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 541 | |||
| d1wdpa1 | 490 | beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | 100.0 | |
| d1b1ya_ | 500 | beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 | 100.0 | |
| d1fa2a_ | 498 | beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI | 100.0 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 100.0 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 99.53 | |
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 99.19 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 98.11 | |
| d2j78a1 | 443 | Beta-glucosidase A {Thermotoga maritima [TaxId: 23 | 97.99 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 97.85 | |
| d1v02a_ | 484 | Plant beta-glucosidase (myrosinase) {Sorghum bicol | 97.83 | |
| d1cbga_ | 490 | Plant beta-glucosidase (myrosinase) {Creeping whit | 97.81 | |
| d1e4ia_ | 447 | Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 | 97.8 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 97.76 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 97.71 | |
| d1gnxa_ | 464 | Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] | 97.7 | |
| d1wcga1 | 462 | Thioglucosidase {Cabbage aphid (Brevicoryne brassi | 97.68 | |
| d1ug6a_ | 426 | Beta-glucosidase A {Thermus thermophilus [TaxId: 2 | 97.63 | |
| d1vffa1 | 423 | Beta-glucosidase A {Archaeon Pyrococcus horikoshii | 97.59 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 97.57 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 97.5 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 97.48 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 97.43 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 97.42 | |
| d1pbga_ | 468 | 6-phospho-beta-D-galactosidase, PGAL {Lactococcus | 97.39 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 97.38 | |
| d1qoxa_ | 449 | Beta-glucosidase A {Bacillus circulans, subsp. alk | 97.36 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 97.28 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 97.28 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 97.26 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 97.25 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 97.22 | |
| d1e4mm_ | 499 | Plant beta-glucosidase (myrosinase) {White mustard | 97.18 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 97.17 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 97.09 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 96.88 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 96.81 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 96.73 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 96.64 | |
| d1ta3b_ | 301 | Xylanase A, catalytic core {Emericella nidulans (A | 96.63 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 96.52 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 96.45 | |
| d1uwsa_ | 489 | beta-Glycosidase {Archaeon Sulfolobus solfataricus | 96.33 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 96.32 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 96.22 | |
| d1i1wa_ | 303 | Xylanase A, catalytic core {Thermoascus aurantiacu | 96.15 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 95.92 | |
| d1qvba_ | 481 | beta-Glycosidase {Archaeon Thermosphaera aggregans | 95.74 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 95.55 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 94.95 | |
| d1zy9a2 | 348 | Alpha-galactosidase GalA catalytic domain {Thermot | 94.31 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 92.51 | |
| d1w32a_ | 346 | Xylanase A, catalytic core {Pseudomonas fluorescen | 90.79 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 89.12 | |
| d1twda_ | 247 | Copper homeostasis protein CutC {Shigella flexneri | 88.86 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 88.74 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 88.56 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 87.61 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 87.37 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 86.41 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 85.74 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 84.28 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 83.67 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 83.63 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 82.93 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 82.82 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 82.78 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 81.71 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 81.29 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 80.89 |
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Soybean (Glycine max) [TaxId: 3847]
Probab=100.00 E-value=3.8e-190 Score=1480.39 Aligned_cols=443 Identities=38% Similarity=0.756 Sum_probs=429.7
Q ss_pred CCCcceEEeeecceeccCCeecCHHHHHHHHHHHHHcCcceEEEeEEeeecccCCCcccccchHHHHHHHHHhCCCcEEE
Q 009162 73 RNGSPVFVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVYDWRGYFDLIVLASNCGLKVRA 152 (541)
Q Consensus 73 ~~~vpv~VMlPLd~V~~~~~~~~~~~~~~~L~~LK~~GVdGV~vdVWWGiVE~~~p~~YdWs~Y~~l~~mv~~~GLKv~~ 152 (541)
.++||||||||||+|+++|+|+++++|+++|++||++||||||||||||+||+++|++|||++|++|++|||++||||||
T Consensus 4 ~~yVpVyVMlPLd~V~~~~~~~~~~~l~~~L~~LK~~GVdGVmvDvWWGiVE~~~P~~YdWsgY~~l~~mvr~~GLKlq~ 83 (490)
T d1wdpa1 4 LNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQECGLTLQA 83 (490)
T ss_dssp TTCCCEEEECCTTSBCTTSCBCCHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEEE
T ss_pred cccccEEEEeecceecCCCcccCHHHHHHHHHHHHHcCCcEEEEeeeeeEeecCCCCccChHHHHHHHHHHHHcCCeEEE
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeecCCCCCCCCCcCCCChhhHhhhhcCCCceeeCCCCCccccceecccCcccccCCCCchHHHHHHHHHHHHHHhhh
Q 009162 153 LLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPL 232 (541)
Q Consensus 153 vmsFHqCGGNVGD~~~IpLP~WV~~~g~~~pdi~ytD~~G~rn~E~LSlg~D~~pv~~GRTpiq~Y~dfm~sF~~~f~~~ 232 (541)
|||||||||||||+|+||||+||++++++||||+||||+|+||+||||||||++|||+||||+|+|+|||+|||++|++|
T Consensus 84 vmSFHqCGGNvGD~~~IPLP~WV~~~g~~~pDi~ftDr~G~rn~E~lSl~~D~~pvl~GRTplq~Y~DFm~SFr~~F~~~ 163 (490)
T d1wdpa1 84 IMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSDF 163 (490)
T ss_dssp EEECSCBCCSTTCSCCBCSCHHHHHHHHHCGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHHTHHH
T ss_pred EEeecccCCCCCcccccCCcHHHHhhhccCCCceeecCCCCcccceeeeeeccccccCCCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcC-ceeEEEecccCCCcCCCCCCCCCCCCCcccCCCCcccccccHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCC
Q 009162 233 LGA-IITGVQVGMGPAGELRYPSLPSQKLMWSWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPE 311 (541)
Q Consensus 233 ~g~-~I~eI~VGlGP~GELRYPSyp~~~g~W~~~~pgiGeFQCYDky~~~~l~~~a~~~gn~~WG~~gP~~ag~Yn~~P~ 311 (541)
+++ +|+||+|||||||||||||||+.+| |+| |||||||||||||+++||++|+++||++|| +|+|+|+||++|+
T Consensus 164 ~~~g~I~eI~VGlGP~GELRYPSYp~~~G-w~y--PGiGEFQCYDky~~~~l~~aA~~~G~~~Wg--~P~dag~yn~~P~ 238 (490)
T d1wdpa1 164 LESGLIIDIEVGLGPAGELRYPSYPQSQG-WEF--PGIGEFQCYDKYLKADFKAAVARAGHPEWE--LPDDAGKYNDVPE 238 (490)
T ss_dssp HHTTCEEEEEECCSGGGBSSCCCSCGGGT-CCT--TCCCCCCCCSHHHHHHHHHHHHHTTCTTCC--SCSSSCCTTCCGG
T ss_pred ccCCeEEEEEeccccCccccCCCCccccC-CcC--CCcceeeeCCHHHHHHHHHHHHHhCCcccC--CCCcCccCCCCCC
Confidence 976 9999999999999999999999985 999 999999999999999999999999999997 6999999999999
Q ss_pred CCCcccCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceEEEEEcceeccCCCCCChhhhcccccCCCCC
Q 009162 312 HTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHPSELTAGYYNTSTR 391 (541)
Q Consensus 312 ~t~FF~~~~g~~~s~YGrFFL~WYs~~Li~HgdrIL~~A~~~F~~~~v~l~aKV~GIHWwy~t~SHaAElTAGyYNt~~r 391 (541)
+|+||++ +|+|+|+||||||+|||++|++||||||+.|+++|++++|+|+||||||||||+|+|||||||||||||++|
T Consensus 239 ~t~FF~~-~G~~~s~YGkFFL~WYs~~Ll~HgdrvL~~A~~~F~g~~v~l~aKv~GIHWwY~t~SHaAElTAGyYNt~~r 317 (490)
T d1wdpa1 239 STGFFKS-NGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDR 317 (490)
T ss_dssp GSTTTST-TSGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEECCCCCTTTTSTTCHHHHHHTCCCBTTB
T ss_pred CCCCCCC-CCccccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeecccCCCCCChHHHhccccCCCCC
Confidence 9999998 689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHhhcCcEEEEeecccccCCcCCCCCCCChHHHHHHHHHHHHHcCCCeecccCccccChHHHHHHHHhhccc
Q 009162 392 DGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFY 471 (541)
Q Consensus 392 dGY~~Ia~mf~rh~~~l~fTClEM~d~eqp~~~~~s~Pe~Lv~QV~~aa~~~Gv~~~GENAL~~~d~~~~~qi~~~~~~~ 471 (541)
|||.|||+|||||+|+|+||||||+|++|| ++++|+||+||+||+++|+++||+|+|||||+|||+++|+||++|++++
T Consensus 318 DGY~~Ia~m~~rh~~~l~FTC~EM~d~eq~-~~a~s~PE~Lv~QV~~aa~~~Gv~vaGENAL~~~d~~~~~qI~~~~~~~ 396 (490)
T d1wdpa1 318 DGYRPIARMLSRHHAILNFTCLEMRDSEQP-SDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNARPQ 396 (490)
T ss_dssp CSSHHHHHHHHTTTCEEEECCTTCCGGGSC-GGGCCCHHHHHHHHHHHHHHTTCCEEEECSSCCCSHHHHHHHHHHHSTT
T ss_pred ccHHHHHHHHHHcCCeEEEecccccccCCC-ccccCCHHHHHHHHHHHHHHcCCceeeeccchhcCchHHHHHHHhcccc
Confidence 999999999999999999999999999999 7999999999999999999999999999999999999999999999886
Q ss_pred CC----CCCCCcceeeEecCCccccCCcChHHHHHHHHHhhCCccccccccccCC
Q 009162 472 SE----GLEKPSFSFNFLRMDKNMFEYHNWVRFTRFVRQLSGSSIFRAKLDFRGD 522 (541)
Q Consensus 472 ~~----~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~m~~~~~~~~~~~~~~~ 522 (541)
+. +...+|++||||||++.||+++||++|++|||+||++.++-++-+-.+.
T Consensus 397 ~~~~~~~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~M~~~~~~~~~~~~~~~ 451 (490)
T d1wdpa1 397 GVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHADQDYCANPQKYNH 451 (490)
T ss_dssp CCCTTSSCSSCCSEEEESCCCHHHHSHHHHHHHHHHHHHHTTTCCCCSCGGGGTC
T ss_pred cCcCCCCcccccceeeeecCCHhhcCcchHHHHHHHHHHhccCCCCCCChHHcCC
Confidence 42 2346799999999999999999999999999999999988777665544
|
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} | Back information, alignment and structure |
|---|
| >d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} | Back information, alignment and structure |
|---|
| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} | Back information, alignment and structure |
|---|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} | Back information, alignment and structure |
|---|
| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
| >d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
| >d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} | Back information, alignment and structure |
|---|
| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
|---|
| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
|---|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} | Back information, alignment and structure |
|---|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
| >d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
| >d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} | Back information, alignment and structure |
|---|
| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
| >d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]} | Back information, alignment and structure |
|---|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|