Citrus Sinensis ID: 009199

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540
Protein Sequence
MASPAEPNHLQNQISSFINATTSTLFSLITPTKTTPSSQSQPSSAPASRLCIPLQFADSSCPSSSTRSPVGSDSISSNSGASSSESSSSGFPSTVRISAINSSGKGGGPAFVGQVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVKQLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKVDGVPVFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDDNLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGNRWLRKATGIQPKFPYMVDSFENRSAASFLRASESTSCLANSETNNGSSDLKLEDKHLDKRDQRPDFRFPFGDWFRHLWSKQDCEAQGSSYIECTKRNLQLNPFLPKVTMVGISTGEAGQMTKANLKKTMENLTKELEQTDQENATSSGSNEYIIEDRDPLFVANVGGYYSGLAKTGSTRWVRGRSNN
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccEEEEEEcccccccccHHHccccccccccccHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHccccccccccEEcHHHHHHHccccccccccccHHHHHHHHHHHHHccccccccccccEEEEEEccccEEEEEccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccHHHHHHHcccccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEcccccccccccccccEcccccccccccccccccccccccccEEEEEEcccccccccEEEEEEEEEcccccccEEEEEcccccccHHcccHHHHHHHHHHcccccccccEEEEEEcccHHHHHHHHcccccccccccHHHHHHHHHHccccccEEcccHHHHHHHHHHHHcccccccccEEccccEEccccccEEEEcccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEccHHHHHHHHHHHcccccHHcccccccccccccccccccHcccccccccccccccccccccccccccccccHHHHHHHHHcccccccccEEEEEEEcccccHccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEccccccEEEEEcccccccccccccccEEEccccc
Coil and Loop (DISEMBL)
maspaepnhlqNQISSFINATTSTlfslitptkttpssqsqpssapasrlciplqfadsscpssstrspvgsdsissnsgasssessssgfpstVRISAinssgkgggpafVGQVFSmcdlsgtglmavsthfdipfiskrtPEWLKKLFATITkserngpvfRFFMDLGDAVTYVKQlnipsgvvgACRLDLAYehfkekphlfqfvpneKQVKAANKLLRtipdsgrkkkvdgvpvfsaqnLDIAIATAdgikwytpyffdknmLDNILEESVDQHFHALIQTRHMQRRRDVIDDNLAAEVVEEIgdsiweppevQEMMdeighpaiplsVISKAAEIQLLYAVDRVLLGNRWlrkatgiqpkfpymvdsfenrsaASFLRAsestsclansetnngssdlkledkhldkrdqrpdfrfpfgdwfrhlwskqdceaqgssyiectkrnlqlnpflpkvtmvgistgeagQMTKANLKKTMENLTKELEQtdqenatssgsneyiiedrdplfvanvggyysglaktgstrwvrgrsnn
Flexible Loop (DISEMBL)
maspaepnhLQNQISSFINATTSTLFSLITPTKTTPSSQSQPSSAPASRLCIPLQFADSSCPSSSTRSPVGsdsissnsgasssessssgfPSTVRISAINSSGKGGGPAFVGQVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATitkserngpVFRFFMDLGDAVTYVKQLNIPSGVVGACRLDLAYEHFKEkphlfqfvpneKQVKAANKLlrtipdsgrkkkvdgvpvfSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDDNLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGNRWLRKatgiqpkfpymVDSFENRSAASFLRASEStsclansetnngssdlkledkhldkrdqrpDFRFPFGDWFRHLWSKQDCEAQGSSYIECTKRNLQLNPFLPKVTMVGISTGEAGQMTKANLKKTMENLTKEleqtdqenatssgsneyiiedRDPLFVANVGGYYsglaktgstrwvrgrsnn
Low Complexity Region (SEG)
MASPAEPNHLQNQISSFINATTSTLFSLItptkttpssqsqpssapasRLCIPLQFADsscpssstrspvgsdsissnsgasssessssgfpsTVRISAINSSGKGGGPAFVGQVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVKQLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKVDGVPVFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDDNLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGNRWLRKATGIQPKFPYMVDSFENRSAASFLRASESTSCLANSETNNGSSDLKLEDKHLDKRDQRPDFRFPFGDWFRHLWSKQDCEAQGSSYIECTKRNLQLNPFLPKVTMVGISTGEAGQMTKANLKKTMENLTKELEQTDQENATSSGSNEYIIEDRDPLFVANVGGYYSGLAKTGSTRWVRGRSNN
Disordered region (IsUnstruct)
****************FINATTSTLFSLI*******************************************************************************PAFVGQVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVKQLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTI*******KVDGVPVFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDDNLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGNRWLRKATGIQPKFPYMVDSF*********************************************FRFPFGDWFRHLWSKQDCEAQGSSYIECTKRNLQLNPFLPKVTMVGIS**************************************YIIEDRDPLFVANVGGYYSGLAKTGSTRW*******
Disordered Region (DISOPRED)
***************SFINATTSTLFSLITP******************LCIPLQFADS**************************************************AFVGQVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVKQLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKA********************PVFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHM****************************V*EMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGNRWLRKATGIQPKFPYMVDSF*************************************************FGDWFRH*************************PFLPKVTMVGIS****************ENL*********************IEDRDPLFVANVGGYYSG****************
Disordered Region (DISEMBL)
*********LQNQISSFINATTSTLFSLIT*****************SRLCIPLQFAD**********************************STVRISAINSSGKGGGPAFVGQVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVKQLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKVDGVPVFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDDNLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGNRWLRKATGIQPKFPYMVDSFENRSAASFLRASESTSCLANSETNNGSSDLKLEDKHLDKRDQRPDFRFPFGDWFRHLWSKQDCEAQGSSYIECTKRNLQLNPFLPKVTMVGISTGEAGQMTKANLKKTMENLTKEL***********GSNEYIIEDRDPLFVANVGGYYSGLAKTGSTRWVRGRSNN
Disordered Region (DISPRO)
***********NQISSFINATTSTLFSLITP********SQPSSAPASRLCIPLQFADS********************************PSTVRISAINSSGKGGGPAFVGQVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVKQLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKVDGVPVFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDDNLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGNRWLRKATGIQPKFPYMVDSFENRSA*****************************************RFPFGDWFRHLWS******QGSSYIECTKRNLQLNPFLPKVTMVGISTGEAGQMTKANLKKTMENLTKELEQTDQENATSSGSNEYIIEDRDPLFVANVGGYYSGLAKTGS*R********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASPAEPNHLQNQISSFINATTSTLFSLITPTKTTPSSQSQPSSAPASRLCIPLQFADSSCPSSSTRSPVGSDSISSNSGASSSESSSSGFPSTVRISAINSSGKGGGPAFVGQVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVKQLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKVDGVPVFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDDNLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGNRWLRKATGIQPKFPYMVDSFENRSAASFLRASESTSCLANSETNNGSSDLKLEDKHLDKRDQRPDFRFPFGDWFRHLWSKQDCEAQGSSYIECTKRNLQLNPFLPKVTMVGISTGEAGQMTxxxxxxxxxxxxxxxxxxxxxNATSSGSNEYIIEDRDPLFVANVGGYYSGLAKTGSTRWVRGRSNN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	540
255545150	544	conserved hypothetical protein [Ricinus	0.987	0.979	0.733	0.0
356530812	532	PREDICTED: uncharacterized protein LOC10	0.964	0.979	0.658	0.0
449456329	554	PREDICTED: uncharacterized protein LOC10	0.983	0.958	0.637	0.0
225464627	556	PREDICTED: uncharacterized protein LOC10	0.983	0.955	0.631	0.0
224134839	424	predicted protein [Populus trichocarpa]	0.766	0.976	0.764	0.0
18424615	529	Tic22-like family protein [Arabidopsis t	0.942	0.962	0.650	0.0
297797241	525	hypothetical protein ARALYDRAFT_496448 [	0.938	0.965	0.647	0.0
356561496	543	PREDICTED: uncharacterized protein LOC10	0.951	0.946	0.617	1e-180
224077492	420	predicted protein [Populus trichocarpa]	0.759	0.976	0.717	1e-172
302143767	436	unnamed protein product [Vitis vinifera]	0.779	0.965	0.688	1e-171

>gi|255545150|ref|XP_002513636.1| conserved hypothetical protein [Ricinus communis] gi|223547544|gb|EEF49039.1| conserved hypothetical protein [Ricinus communis]

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/548 (73%), Positives = 454/548 (82%), Gaps = 15/548 (2%)

Query: 1   MASPAEPNHLQNQISSFINATTSTLFSLI-TPTKTTPSSQSQPSSAPASRLCIPLQFADS 59
           M+   +PNH  +Q S+F ++ T+ + SLI T  KT+PSS + P S P  ++CIP QFADS
Sbjct: 1   MSLSPDPNH-HHQPSNFFHSATTAITSLISTNPKTSPSS-TIPLSPP--KICIPFQFADS 56

Query: 60  SCPSSSTRSPVGS---DSISSNSGAS---SSESSSSGFPSTVRISAINSSGKGGGPAFVG 113
           S     TRS   S   DS+S  S A    SS  SSSGFPSTVRI+ +NS+GKGGGPAFVG
Sbjct: 57  SY-RPLTRSSFESTHPDSVSPKSAAVKGLSSAESSSGFPSTVRIAGLNSNGKGGGPAFVG 115

Query: 114 QVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAV 173
           QVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKK+F T+TKSER GPVFRFFMDLGDAV
Sbjct: 116 QVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKVFTTVTKSERKGPVFRFFMDLGDAV 175

Query: 174 TYVKQLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKV 233
           TYVK+LNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAAN+LL+TIP S  ++KV
Sbjct: 176 TYVKRLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANQLLKTIPQSDGRRKV 235

Query: 234 DGVPVFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRD 293
           DGVPVFSAQNLDIAIAT DGIKWYTPYFFDK+MLDNILEESVDQHFHALIQTRHMQRRRD
Sbjct: 236 DGVPVFSAQNLDIAIATTDGIKWYTPYFFDKSMLDNILEESVDQHFHALIQTRHMQRRRD 295

Query: 294 VIDDNLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGN 353
           VIDDNLAAEV+EE+GDS+ EPPEVQEMMDEIGHPAIPL+VISKAAEIQLLYAVDRV+LGN
Sbjct: 296 VIDDNLAAEVIEEMGDSMLEPPEVQEMMDEIGHPAIPLNVISKAAEIQLLYAVDRVILGN 355

Query: 354 RWLRKATGIQPKFPYMVDSFENRSAASFLRASESTSCLANSETNNGSSDLKLEDKHLDKR 413
           RWLRKATGIQPKFPYMVDSFE RSA+SF RASE  S LA S+T+  +S L LED      
Sbjct: 356 RWLRKATGIQPKFPYMVDSFEKRSASSFRRASEPASYLAKSKTDADTSKLNLEDGAQANH 415

Query: 414 DQRPDFRFPFGDWFRHLWSKQDCEAQ-GSSYIECTKRNLQLNPFLPKVTMVGISTGEAGQ 472
           +   D R  FGDWF+ L  KQ  + + GS   EC K+ L++NPFLPK+TMVGISTGEAGQ
Sbjct: 416 EPITDLRLQFGDWFKSLGLKQQQKPEKGSEISECRKQKLEMNPFLPKITMVGISTGEAGQ 475

Query: 473 MTKANLKKTMENLTKELEQTDQENA--TSSGSNEYIIEDRDPLFVANVGGYYSGLAKTGS 530
           M+KA+LKKTME+LT+ELE TD+ENA  +S+  N+  +EDRDPLFVANVG YYSG++KT S
Sbjct: 476 MSKASLKKTMEDLTRELEHTDRENAPGSSNNGNDLEMEDRDPLFVANVGDYYSGMSKTNS 535

Query: 531 TRWVRGRS 538
            R VRG S
Sbjct: 536 PRLVRGGS 543

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530812|ref|XP_003533974.1| PREDICTED: uncharacterized protein LOC100809082 [Glycine max]

 Score =  699 bits (1803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/550 (65%), Positives = 416/550 (75%), Gaps = 29/550 (5%)

Query: 1   MASPAEPNHLQ--NQISSFINATTSTLFSLITPTKTTPSSQSQPSSAPASRLCIPLQFAD 58
           MA P+EP+  +  N IS+F+ +T S   SL  P    P S + P   P S   +PL FA 
Sbjct: 1   MALPSEPHRRRRHNHISTFLQSTASNFASLFNPP--NPPSLALPH--PPSSFSLPLFFA- 55

Query: 59  SSCPSSSTRSPVGSDSISSNSGASSSESSSSGFPSTVRISAINSSGKGGG-PAFVGQVFS 117
              P  S+ + V S +      A+ S          VRI+ + ++GKGGG P FVGQVFS
Sbjct: 56  ---PPLSSSTAVDSATAEPARPAAKS----------VRIARLGANGKGGGGPVFVGQVFS 102

Query: 118 MCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVK 177
           MCDLSGTGLMAVSTHFDIPFISKRTPEWLKK+FA ITKSERNGPVFRFF+DLGDAV+YVK
Sbjct: 103 MCDLSGTGLMAVSTHFDIPFISKRTPEWLKKVFAAITKSERNGPVFRFFIDLGDAVSYVK 162

Query: 178 QLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKVDGVP 237
           +LNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLL+TI + G KKKVDGVP
Sbjct: 163 KLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLKTISEHGEKKKVDGVP 222

Query: 238 VFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDD 297
           VFSAQNLDIAIAT DGIKWYTPYFFDKNMLDNILEE+VDQHFH LIQTRHM RRRDV+DD
Sbjct: 223 VFSAQNLDIAIATTDGIKWYTPYFFDKNMLDNILEEAVDQHFHTLIQTRHMHRRRDVVDD 282

Query: 298 NLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGNRWLR 357
           NLAAEV+EE+GDS+ EPPEVQE++DE+GHP+IPLSVISKAAE+Q  Y VD+V LGNRWLR
Sbjct: 283 NLAAEVIEEMGDSLGEPPEVQELLDEMGHPSIPLSVISKAAELQFQYTVDKVFLGNRWLR 342

Query: 358 KATGIQPKFPYMVDSFENRSAASFLRASESTSCLANSETNN--------GSSDLKLEDKH 409
           KATGIQP FPYMVDSFE RS AS LRA+ES+S L NS+  +         SS   L+   
Sbjct: 343 KATGIQPIFPYMVDSFERRSEASLLRATESSSSLENSKVEDDRKNAECIDSSKCSLDGNT 402

Query: 410 LDKRDQRPDFRFPFGDWFRHLWSKQDCEAQGSSYIECTKRNLQLNPFLPKVTMVGISTGE 469
              +   P    PFG+WF HLW KQ  +  GSS     K  ++  PFLPK+TMVG+ST E
Sbjct: 403 EAIKQSSPRLSLPFGNWFHHLWPKQCRKKVGSSRKGVNKEEMKPAPFLPKITMVGLSTEE 462

Query: 470 AGQMTKANLKKTMENLTKELEQTDQENATSSGSNEYIIEDRDPLFVANVGGYYSGLAKTG 529
           AGQM+KANLKKTM++LT+ELE+T+ +  T  GS E  +EDRDPLFVANVG YYS L K G
Sbjct: 463 AGQMSKANLKKTMDDLTRELEKTELDIMTDGGSKECKVEDRDPLFVANVGDYYSSLGKPG 522

Query: 530 STRWVRGRSN 539
           S RW+RG SN
Sbjct: 523 SGRWIRGGSN 532

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456329|ref|XP_004145902.1| PREDICTED: uncharacterized protein LOC101215938 [Cucumis sativus]

 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/557 (63%), Positives = 418/557 (75%), Gaps = 26/557 (4%)

Query: 1   MASPAEPN---HLQNQ---ISSFINATTSTLFSLITPTKTTPSSQSQPSSAPASRLCIPL 54
           MA   EP+   H QN    I+   +++TS   +L    ++ P    Q SS   S+LCIP+
Sbjct: 1   MAFQIEPSSEPHEQNPLTFITHLFHSSTSNFSTLFANPQSIPPFPFQSSS---SKLCIPV 57

Query: 55  QFADSSCPSSSTRSPVGS-----DSISSNS--GASSSESSSSGFPSTVRISAINSSGKGG 107
            F  S  P   + S   S     DS  S +  G SSS +  SGFPST+RIS +NS GK G
Sbjct: 58  AFPPSPKPPFLSHSGFHSIHYDLDSPKSAAVKGLSSSPNFDSGFPSTLRISGLNSDGKTG 117

Query: 108 GPAFVGQVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFM 167
           GPAFVGQVFSMCDLSG GLMAV+++ +IPF+SKRT EWLKK+F+TITKS+RN P+FRFF 
Sbjct: 118 GPAFVGQVFSMCDLSGAGLMAVTSNMNIPFVSKRTEEWLKKMFSTITKSKRNAPIFRFFT 177

Query: 168 DLGDAVTYVKQLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDS 227
           DLGDAVTYVK+LNIPS VVG CRLDLAYEHFKEKPHLFQF+PNEKQVKAANKLL+ +P +
Sbjct: 178 DLGDAVTYVKRLNIPSAVVGVCRLDLAYEHFKEKPHLFQFIPNEKQVKAANKLLKGLPQN 237

Query: 228 GRKKKVDGVPVFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRH 287
           G  KK+DGVPVFSAQNLDIAIAT +GIKWYTPYFFDKNMLDNILEESVDQHFHALIQTR 
Sbjct: 238 GGSKKIDGVPVFSAQNLDIAIATTNGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRR 297

Query: 288 MQRRRDVIDDNLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVD 347
           +QRRR+++DDN AAEV+EE+GDS+ EPPEVQE+MDE+G+P IPLSVISK AE+QLLY VD
Sbjct: 298 LQRRREIVDDNAAAEVLEEMGDSLLEPPEVQEVMDEMGNPGIPLSVISKVAEMQLLYTVD 357

Query: 348 RVLLGNRWLRKATGIQPKFPYMVDSFENRSAASFLRASESTSCLANSETNN--------G 399
           +V+LGNRWLRKA GIQPKFPYMVDSFE RSAAS LR  ES S L NSE+           
Sbjct: 358 KVILGNRWLRKAVGIQPKFPYMVDSFERRSAASLLRIQESASGLTNSESVEETKELQCYS 417

Query: 400 SSDLKLEDKHLDKRDQRPDFRFPFGDWFRHLWSKQDCEAQGSSYIECTKRNLQLNPFLPK 459
           SS L  ED     ++ +     PF +WF HLWSKQ      S   E TK+N+Q++PFLPK
Sbjct: 418 SSPLNTEDNREANQEPKQHSFNPFRNWFGHLWSKQRQRDDFSQ--ERTKQNVQISPFLPK 475

Query: 460 VTMVGISTGEAGQMTKANLKKTMENLTKELEQTDQENATSSGSNEYIIEDRDPLFVANVG 519
           +TMVGISTG++G  +KANLKKTME+LT+ELE  DQ NA S    E+  E+RDPLFVANV 
Sbjct: 476 ITMVGISTGDSGHTSKANLKKTMEDLTRELEHIDQGNAASHNEYEFNNEERDPLFVANVS 535

Query: 520 GYYSGLAKTGSTRWVRG 536
            + SGL+K GS RWVRG
Sbjct: 536 HFSSGLSKAGSARWVRG 552

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464627|ref|XP_002274346.1| PREDICTED: uncharacterized protein LOC100242331 [Vitis vinifera]

 Score =  684 bits (1765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/564 (63%), Positives = 413/564 (73%), Gaps = 33/564 (5%)

Query: 1   MASPAEP-----NHLQNQISSFINATTSTLFSLITPTKTTPSSQSQPSSAPA-----SRL 50
           M SP +P     +H       F  +T S L SL+ P+KTTP S   P  AP      S++
Sbjct: 1   MDSPTQPQNPPHHHPLKAAHQFFCSTASNLLSLL-PSKTTPFS---PKPAPVCFPNPSKI 56

Query: 51  CIPLQFADSSCPSSSTRSPVGSDSISSNSGASSSESSSSGFPSTVRISAINSSGKGGGPA 110
           C+PL FA S  P   +     S+S S+  G   S  S S FP  VRI  +N+S KGGGPA
Sbjct: 57  CVPLFFA-SPAPQLPSSESAQSNSASATKG--ESPESGSAFPKDVRIGGLNTSAKGGGPA 113

Query: 111 FVGQVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLG 170
           FVGQVFSMCD+SG G+MAVS HFDIPFISKR P+ +KK+FATITKS++NGPVFRFFMDLG
Sbjct: 114 FVGQVFSMCDVSGNGIMAVSNHFDIPFISKRMPQRIKKMFATITKSDKNGPVFRFFMDLG 173

Query: 171 DAVTYVKQLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDSGRK 230
           DAV YVK+LNIPSG VGACRLDLAY HF EKPHLF+FVPNEKQVKAANKLL+ IP +G +
Sbjct: 174 DAVRYVKKLNIPSGGVGACRLDLAYGHFMEKPHLFRFVPNEKQVKAANKLLKKIPQNGGR 233

Query: 231 KKVDGVPVFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQR 290
           K++DGVPVF+AQNLDIAIAT DGIKWYTPYFFDK+ LD+ILE+S+D HFH LIQ+RH+QR
Sbjct: 234 KRIDGVPVFTAQNLDIAIATTDGIKWYTPYFFDKHTLDSILEQSIDHHFHHLIQSRHVQR 293

Query: 291 RRDVIDDNLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVL 350
           RRDVIDDNLAAEV+E+  +S+WEPPEVQE++DE+GHP IPLSVISKAAE+QLLYAVDRVL
Sbjct: 294 RRDVIDDNLAAEVLEDNAESLWEPPEVQEVLDEVGHPGIPLSVISKAAEMQLLYAVDRVL 353

Query: 351 LGNRWLRKATGIQPKFPYMVDSFENRSAASFLRASESTSCLANSETNN--------GSSD 402
           LGNRWLRKATGIQPKFPYMVDSFE RSAASF RAS S   +A+ E  N        G SD
Sbjct: 354 LGNRWLRKATGIQPKFPYMVDSFEKRSAASFRRASPSKRFVASPEMGNDNKDTEELGPSD 413

Query: 403 LKLEDKHLDKRDQRPDFRFPFGDWFRHLWSKQDCEAQGSSYI-------ECTKRNLQLNP 455
            KLED     + Q     FP  D F H WS +  E Q  S         E  K+ LQL P
Sbjct: 414 PKLEDNTQRDQGQNSASWFPVWDLFNHPWSNKRQEPQNRSNARIEDASREHIKQELQLAP 473

Query: 456 FLPKVTMVGISTGEAGQMTKANLKKTMENLTKELEQTDQENATSSGSNEYIIEDRDPLFV 515
           FLPK+TMVGIS GE+G M+K NLKKTME+LTKELEQ DQENA    ++E+ +E+RDPLFV
Sbjct: 474 FLPKITMVGISAGESG-MSKVNLKKTMEDLTKELEQADQENAVGCINSEFEVENRDPLFV 532

Query: 516 ANVGGYYSGLAKTGSTRWVRGRSN 539
           ANVG Y SGL        VRG +N
Sbjct: 533 ANVGSYGSGLVARSPVPSVRGENN 556

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134839|ref|XP_002327502.1| predicted protein [Populus trichocarpa] gi|222836056|gb|EEE74477.1| predicted protein [Populus trichocarpa]

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/425 (76%), Positives = 370/425 (87%), Gaps = 11/425 (2%)

Query: 118 MCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVK 177
           MCDLSGTGLMAVSTHFD+PFISKRTPEWLKK+FAT+TKSERNGPVFRFFMDLGDAV YVK
Sbjct: 1   MCDLSGTGLMAVSTHFDVPFISKRTPEWLKKIFATVTKSERNGPVFRFFMDLGDAVAYVK 60

Query: 178 QLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKVDGVP 237
           +LNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAAN+LL++IP     ++VDGVP
Sbjct: 61  RLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANQLLKSIPHGDGSRRVDGVP 120

Query: 238 VFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDD 297
           VFSAQNLDIAIAT DGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDD
Sbjct: 121 VFSAQNLDIAIATTDGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDD 180

Query: 298 NLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGNRWLR 357
           N+AAEV+EE+GDS+ EPPEVQE++DE+GHPAIPLSVISKAAEIQLLYAVD+VLLGNRWLR
Sbjct: 181 NVAAEVIEEMGDSLLEPPEVQEVLDEMGHPAIPLSVISKAAEIQLLYAVDKVLLGNRWLR 240

Query: 358 KATGIQPKFPYMVDSFENRSAASFLRASESTSCLANSETNNGSSDLKLEDKHLDKRDQRP 417
           KATGIQPKFPY+VDSFE RSA+S  RA ESTSCLANS+ ++ +S+ KL+D      +QR 
Sbjct: 241 KATGIQPKFPYLVDSFERRSASSLRRALESTSCLANSKIDDSTSEHKLKDNVQTDHEQRK 300

Query: 418 DFRFPFGDWFRHLWSKQ--------DCEAQGSSYIECTKRNLQLNPFLPKVTMVGISTGE 469
           D R PFGDWF H W K+        D   +G S  +C K   + NPFLPKVTMVG+STG+
Sbjct: 301 DLRLPFGDWFSHPWLKKHSKSERESDTRKEGLSK-DCLKWKSESNPFLPKVTMVGVSTGD 359

Query: 470 AGQMTKANLKKTMENLTKELEQTDQENAT--SSGSNEYIIEDRDPLFVANVGGYYSGLAK 527
           AGQ++K++LKKTME+LTKELEQTD+ N +  S+ S+E+ + DRDPLFVANVG YYSG+AK
Sbjct: 360 AGQLSKSSLKKTMEDLTKELEQTDEANDSFISNSSSEFKVNDRDPLFVANVGDYYSGMAK 419

Query: 528 TGSTR 532
           TG +R
Sbjct: 420 TGISR 424

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18424615|ref|NP_568958.1| Tic22-like family protein [Arabidopsis thaliana] gi|15809802|gb|AAL06829.1| AT5g62650/MRG21_7 [Arabidopsis thaliana] gi|18377813|gb|AAL67093.1| AT5g62650/MRG21_7 [Arabidopsis thaliana] gi|332010256|gb|AED97639.1| Tic22-like family protein [Arabidopsis thaliana]

 Score =  682 bits (1759), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/550 (65%), Positives = 428/550 (77%), Gaps = 41/550 (7%)

Query: 1   MASPAEPNHLQNQISSFINATTSTLFSLITPTKTTPSSQSQPSSAPASRLCIPLQFADSS 60
           M SP +  H ++  + F+++  +++ S I P          P +AP SR+C+PL+F+   
Sbjct: 1   MGSP-DKQHRRHVAAEFLHSAVTSISSSIIPL-------FPPKTAP-SRVCLPLRFS--- 48

Query: 61  CPSSSTRSPVGSDSISS---NSGASSSESSSSGFPSTVRISAINSSGKGGGPAFVGQVFS 117
                      SD +SS   ++  S+S +SSSG  STVRIS+++S GK GGPAFVGQVFS
Sbjct: 49  ----------VSDDVSSPFESTVKSTSSASSSGLNSTVRISSLSSDGKRGGPAFVGQVFS 98

Query: 118 MCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVK 177
           MCDL+GTGLMAVSTHFDIPFISKRTPEWLKK+F+TITKSERNGPVFRFFMDLGDAV+YVK
Sbjct: 99  MCDLTGTGLMAVSTHFDIPFISKRTPEWLKKMFSTITKSERNGPVFRFFMDLGDAVSYVK 158

Query: 178 QLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKVDGVP 237
           +LNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNE+QVKAANKLL+++P +G+ +KV+GVP
Sbjct: 159 KLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNERQVKAANKLLKSMPQNGKTQKVEGVP 218

Query: 238 VFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDD 297
           VF AQNLDIA+ATADGIKWYTPYFFDK +LDNILEESVDQHFH LIQTRH+QRRRDV+DD
Sbjct: 219 VFGAQNLDIAVATADGIKWYTPYFFDKAVLDNILEESVDQHFHTLIQTRHVQRRRDVVDD 278

Query: 298 NLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGNRWLR 357
           +LA+EV+EE+GDS+ EPPEVQE M+EIG   IPLSV++KAAEIQLLYAVDRVLLG+RW R
Sbjct: 279 SLASEVMEEMGDSMLEPPEVQEAMEEIGTSGIPLSVVAKAAEIQLLYAVDRVLLGSRWFR 338

Query: 358 KATGIQPKFPYMVDSFENRSAASFLRASES-TSCLANS-ETNNGSSDLKLED---KHLDK 412
           KATGIQPK PY+VDSFE RSA S  RAS S T CL +S E +  +S L++ED      +K
Sbjct: 339 KATGIQPKLPYLVDSFERRSAFSIQRASGSATRCLGDSVEADTSASLLRVEDDSPSEAEK 398

Query: 413 RDQRPDFRFPFGDWFRHLWS-KQDCEAQGSS---YIECTKRNLQLNPFLPKVTMVGISTG 468
           R Q     FPFGDW  H  S K+    +GSS    +E  +R +  +PFLPK+TMVGISTG
Sbjct: 399 RQQH--LWFPFGDWISHSVSRKEHTHHKGSSDQRDMESREREMLRSPFLPKITMVGISTG 456

Query: 469 EAGQMTKANLKKTMENLTKELEQTDQENATSSGSNEY---IIEDRDPLFVANVGGYYSGL 525
           EA QM+KANLKKTME+LT++LEQ+D+ N    GS  Y    IE+RDPLFVANVG YYSGL
Sbjct: 457 EAAQMSKANLKKTMEDLTEDLEQSDEGN--DHGSKRYDSLKIEERDPLFVANVGDYYSGL 514

Query: 526 AKTGSTRWVR 535
           AK GS R  R
Sbjct: 515 AKAGSARLSR 524

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297797241|ref|XP_002866505.1| hypothetical protein ARALYDRAFT_496448 [Arabidopsis lyrata subsp. lyrata] gi|297312340|gb|EFH42764.1| hypothetical protein ARALYDRAFT_496448 [Arabidopsis lyrata subsp. lyrata]

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/548 (64%), Positives = 428/548 (78%), Gaps = 41/548 (7%)

Query: 1   MASPAEPNHLQNQISSFINATTSTLFSLITPTKTTPSSQSQPSSAPASRLCIPLQFADSS 60
           M SP +  H ++  + F+++  +++  L  P KT PS           R+C+PL+F+   
Sbjct: 1   MGSP-DKQHRRHVAAEFLHSAVTSIIPLFPP-KTAPS-----------RVCLPLRFS--- 44

Query: 61  CPSSSTRSPVGSDSISS---NSGASSSESSSSGFPSTVRISAINSSGKGGGPAFVGQVFS 117
                      SD +SS   ++  SSS +SSSG  STVRIS+++S GK GGPAFVGQVFS
Sbjct: 45  ----------VSDDVSSPFESTVKSSSSTSSSGLNSTVRISSLSSDGKRGGPAFVGQVFS 94

Query: 118 MCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVK 177
           MCDL+GTGLMAVSTHFDIPFISKRTPEWLKK+F+TITKSERNGPVFRFFMDLGDAV+YVK
Sbjct: 95  MCDLTGTGLMAVSTHFDIPFISKRTPEWLKKMFSTITKSERNGPVFRFFMDLGDAVSYVK 154

Query: 178 QLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKVDGVP 237
           +LNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNE+QVKAANKLL+++P +GRK+KV+GVP
Sbjct: 155 KLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNERQVKAANKLLKSMPQNGRKQKVEGVP 214

Query: 238 VFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDD 297
           VF AQNLDIA+ATADGIKWYTPYFFDK +LDNILEESVDQHFH LIQTRH+QRRRDV+DD
Sbjct: 215 VFGAQNLDIAVATADGIKWYTPYFFDKAVLDNILEESVDQHFHTLIQTRHVQRRRDVVDD 274

Query: 298 NLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGNRWLR 357
           +LA+EV+EE+GDS+ EPPEVQE M+EIG   IPLSV++KAAEIQLLYAVDRVLLG+RW R
Sbjct: 275 SLASEVMEEMGDSMLEPPEVQEAMEEIGSSGIPLSVVAKAAEIQLLYAVDRVLLGSRWFR 334

Query: 358 KATGIQPKFPYMVDSFENRSAASFLRASES-TSCLANS-ETNNGSSDLKLEDKHLDKRDQ 415
           KATGIQPK PY+VDSFE RSA S  RAS S T CL +S E +  +S L++ED    + ++
Sbjct: 335 KATGIQPKLPYLVDSFERRSAFSIQRASGSATRCLGDSVEADTSASLLRVEDNSPSEDEK 394

Query: 416 R-PDFRFPFGDWFRHLWSKQD-CEAQGSS---YIECTKRNLQLNPFLPKVTMVGISTGEA 470
           R  +  FPFGDW  H  SK++    +G S    +E  +R +  +PFLPK+TMVGISTGEA
Sbjct: 395 RQQNLWFPFGDWINHSESKKEHTHHKGPSDGRDMESREREMLRSPFLPKITMVGISTGEA 454

Query: 471 GQMTKANLKKTMENLTKELEQTDQENATSSGSNEY---IIEDRDPLFVANVGGYYSGLAK 527
            QM+KANLKKTME+LT++LEQ+D+ N    GS  Y    +E+RDPLFVANVG YYSG+AK
Sbjct: 455 AQMSKANLKKTMEDLTEDLEQSDEGN--DHGSKRYDPRKMEERDPLFVANVGDYYSGMAK 512

Query: 528 TGSTRWVR 535
            GS R  R
Sbjct: 513 AGSARLSR 520

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356561496|ref|XP_003549017.1| PREDICTED: uncharacterized protein LOC100797355 [Glycine max]

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 337/546 (61%), Positives = 400/546 (73%), Gaps = 32/546 (5%)

Query: 1   MASPAEPNHLQNQ----ISSFINATTSTLFSLITPTKTTPSSQSQPSSAPASRLCIPLQF 56
           MA P+EP+  +      IS+F+ +T S   SL  P    P S + P   P + + +PL F
Sbjct: 16  MALPSEPHRRRRHNHNHISTFLQSTASNFASLFNPP--NPPSLTLPH--PPTSVSLPLFF 71

Query: 57  ADSSCPSSSTRSPVGSDSISSNSGASSSESSSSGFPSTVRISAINSSGKGGG-PAFVGQV 115
           A     SS+       DS +S      ++S        VRI+ + ++GKGGG P F+G+V
Sbjct: 72  APPLSGSSTV------DSATSKPAHPPAKS--------VRIARLGANGKGGGGPVFLGEV 117

Query: 116 FSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTY 175
           FS+CDLSGTGL+A S HF IPFIS+RTPEWLKK+FA ITKSERNGPVFRFF+DL DAV+Y
Sbjct: 118 FSLCDLSGTGLIAASKHFGIPFISERTPEWLKKIFAPITKSERNGPVFRFFIDLEDAVSY 177

Query: 176 VKQLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKVDG 235
           V++LNIPS VVGA RLDLAY+ FKEKPHLFQFVPNEKQVKAANKLL+TI + G KKKVDG
Sbjct: 178 VEKLNIPSCVVGAFRLDLAYKQFKEKPHLFQFVPNEKQVKAANKLLKTISEHGDKKKVDG 237

Query: 236 VPVFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVI 295
           VPVF AQNLDIAIAT DGIKWYTPYFFDKNMLDNILE++VDQHFH LIQTRHMQRRRDV+
Sbjct: 238 VPVFGAQNLDIAIATTDGIKWYTPYFFDKNMLDNILEDAVDQHFHNLIQTRHMQRRRDVV 297

Query: 296 DDNLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGNRW 355
           DDNLAAEV+EE+ D + EPPEVQE++DE+GHP+IPLSVISKAA +Q  Y VD+VLLGNRW
Sbjct: 298 DDNLAAEVIEEMSDRLGEPPEVQELLDEMGHPSIPLSVISKAAGLQFQYTVDKVLLGNRW 357

Query: 356 LRKATGIQPKFPYMVDSFENRSAASFLRASESTSCLANSETNN--------GSSDLKLED 407
           LRKATGIQPKFPYMVDSFE RS AS LRA+ES+SCL NS+  +         SS+  L+ 
Sbjct: 358 LRKATGIQPKFPYMVDSFERRSEASLLRATESSSCLENSKVEDDRQISECLDSSNCSLDG 417

Query: 408 KHLDKRDQRPDFRFPFGDWFRHLWSKQDCEAQGSSYIECTKRNLQLNPFLPKVTMVGIST 467
                +   P    PFG+WF HLW KQ  E   SS     K  ++  P LPKVTMVG+ST
Sbjct: 418 NTEAIKQPSPSLSLPFGNWFHHLWPKQCREKASSSRKGVNKEEMKPRPILPKVTMVGLST 477

Query: 468 GEAGQMTKANLKKTMENLTKELEQTDQENATSSGSNEYIIEDRDPLFVANVGGYYSGL-A 526
            EAGQ +KANLKKTM++LT+ELE+T+ +  T  GS E  +EDRDPLFVAN G YYS +  
Sbjct: 478 EEAGQTSKANLKKTMDDLTRELEKTELDIMTDGGSKECKVEDRDPLFVANGGNYYSSMRR 537

Query: 527 KTGSTR 532
           K GS R
Sbjct: 538 KPGSGR 543

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224077492|ref|XP_002305270.1| predicted protein [Populus trichocarpa] gi|222848234|gb|EEE85781.1| predicted protein [Populus trichocarpa]

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 305/425 (71%), Positives = 348/425 (81%), Gaps = 15/425 (3%)

Query: 118 MCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVK 177
           MCDLSGTGLMAVSTHFD+PFISKR+   L   + T+ + E  G +          V YVK
Sbjct: 1   MCDLSGTGLMAVSTHFDVPFISKRS---LLLPYFTLVELELAGVITCILNWFVLQVAYVK 57

Query: 178 QLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKVDGVP 237
           +LNIPSGVVGACRLDLAYEHFKEKP LFQFVPNEKQVKAA++LL+TIP S   ++VDGVP
Sbjct: 58  RLNIPSGVVGACRLDLAYEHFKEKPQLFQFVPNEKQVKAAHQLLKTIPHSDGSRRVDGVP 117

Query: 238 VFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDD 297
           VFSAQNLDIAIAT DGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRH QRRRDVIDD
Sbjct: 118 VFSAQNLDIAIATKDGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHTQRRRDVIDD 177

Query: 298 NLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGNRWLR 357
           N++AEV+EE+GDS+ EPPEVQE++DE+GHPAIPLSVISKAAEIQLLYAVD+VLLGNRWLR
Sbjct: 178 NVSAEVIEEMGDSLLEPPEVQEVLDEMGHPAIPLSVISKAAEIQLLYAVDKVLLGNRWLR 237

Query: 358 KATGIQPKFPYMVDSFENRSAASFLRASESTSCLANSETNNGSSDLKLEDKHLDKRDQRP 417
           KATGIQPKFPY+VDSFE RSA+S  RASESTSCLAN +T++ +S+ KL+DK  D   QR 
Sbjct: 238 KATGIQPKFPYLVDSFERRSASSLQRASESTSCLANCKTDDSTSEHKLKDKVTDHV-QRK 296

Query: 418 DFRFPFGDWFRHLWSKQ--------DCEAQGSSYIECTKRNLQLNPFLPKVTMVGISTGE 469
           D R PFGDWF H WSK         D   +  S  +  K+NL+ NPFLPKVTMVG+STG+
Sbjct: 297 DLRLPFGDWFSHPWSKTLGKSEREPDTRKEAPSR-DFLKQNLESNPFLPKVTMVGVSTGD 355

Query: 470 AGQMTKANLKKTMENLTKELEQTDQEN--ATSSGSNEYIIEDRDPLFVANVGGYYSGLAK 527
           AGQ++KA++KKTME+LTKELE TDQ N    S+ S EY +EDRDPLFVANVG YYSG+AK
Sbjct: 356 AGQLSKASVKKTMEDLTKELEHTDQANDSGISNCSGEYKVEDRDPLFVANVGDYYSGMAK 415

Query: 528 TGSTR 532
           TGS R
Sbjct: 416 TGSPR 420

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143767|emb|CBI22628.3| unnamed protein product [Vitis vinifera]

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 301/437 (68%), Positives = 345/437 (78%), Gaps = 16/437 (3%)

Query: 118 MCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVK 177
           MCD+SG G+MAVS HFDIPFISKR P+ +KK+FATITKS++NGPVFRFFMDLGDAV YVK
Sbjct: 1   MCDVSGNGIMAVSNHFDIPFISKRMPQRIKKMFATITKSDKNGPVFRFFMDLGDAVRYVK 60

Query: 178 QLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKVDGVP 237
           +LNIPSG VGACRLDLAY HF EKPHLF+FVPNEKQVKAANKLL+ IP +G +K++DGVP
Sbjct: 61  KLNIPSGGVGACRLDLAYGHFMEKPHLFRFVPNEKQVKAANKLLKKIPQNGGRKRIDGVP 120

Query: 238 VFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDD 297
           VF+AQNLDIAIAT DGIKWYTPYFFDK+ LD+ILE+S+D HFH LIQ+RH+QRRRDVIDD
Sbjct: 121 VFTAQNLDIAIATTDGIKWYTPYFFDKHTLDSILEQSIDHHFHHLIQSRHVQRRRDVIDD 180

Query: 298 NLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSVISKAAEIQLLYAVDRVLLGNRWLR 357
           NLAAEV+E+  +S+WEPPEVQE++DE+GHP IPLSVISKAAE+QLLYAVDRVLLGNRWLR
Sbjct: 181 NLAAEVLEDNAESLWEPPEVQEVLDEVGHPGIPLSVISKAAEMQLLYAVDRVLLGNRWLR 240

Query: 358 KATGIQPKFPYMVDSFENRSAASFLRASESTSCLANSETNN--------GSSDLKLEDKH 409
           KATGIQPKFPYMVDSFE RSAASF RAS S   +A+ E  N        G SD KLED  
Sbjct: 241 KATGIQPKFPYMVDSFEKRSAASFRRASPSKRFVASPEMGNDNKDTEELGPSDPKLEDNT 300

Query: 410 LDKRDQRPDFRFPFGDWFRHLWSKQDCEAQGSSYI-------ECTKRNLQLNPFLPKVTM 462
              + Q     FP  D F H WS +  E Q  S         E  K+ LQL PFLPK+TM
Sbjct: 301 QRDQGQNSASWFPVWDLFNHPWSNKRQEPQNRSNARIEDASREHIKQELQLAPFLPKITM 360

Query: 463 VGISTGEAGQMTKANLKKTMENLTKELEQTDQENATSSGSNEYIIEDRDPLFVANVGGYY 522
           VGIS GE+G M+K NLKKTME+LTKELEQ DQENA    ++E+ +E+RDPLFVANVG Y 
Sbjct: 361 VGISAGESG-MSKVNLKKTMEDLTKELEQADQENAVGCINSEFEVENRDPLFVANVGSYG 419

Query: 523 SGLAKTGSTRWVRGRSN 539
           SGL        VRG +N
Sbjct: 420 SGLVARSPVPSVRGENN 436

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	540
TAIR|locus:2172234	529	AT5G62650 "AT5G62650" [Arabido	0.814	0.831	0.725	5e-170

TAIR|locus:2172234 AT5G62650 "AT5G62650" [Arabidopsis thaliana (taxid:3702)]

 Score = 1653 (586.9 bits), Expect = 5.0e-170, P = 5.0e-170
 Identities = 328/452 (72%), Positives = 380/452 (84%)

Query:    94 TVRISAINSSGKGGGPAFVGQVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATI 153
             TVRIS+++S GK GGPAFVGQVFSMCDL+GTGLMAVSTHFDIPFISKRTPEWLKK+F+TI
Sbjct:    75 TVRISSLSSDGKRGGPAFVGQVFSMCDLTGTGLMAVSTHFDIPFISKRTPEWLKKMFSTI 134

Query:   154 TKSERNGPVFRFFMDLGDAVTYVKQLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQ 213
             TKSERNGPVFRFFMDLGDAV+YVK+LNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNE+Q
Sbjct:   135 TKSERNGPVFRFFMDLGDAVSYVKKLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNERQ 194

Query:   214 VKAANKLLRTIPDSGRKKKVDGVPVFSAQNLDIAIATADGIKWYTPYFFDKNMLDNILEE 273
             VKAANKLL+++P +G+ +KV+GVPVF AQNLDIA+ATADGIKWYTPYFFDK +LDNILEE
Sbjct:   195 VKAANKLLKSMPQNGKTQKVEGVPVFGAQNLDIAVATADGIKWYTPYFFDKAVLDNILEE 254

Query:   274 SVDQHFHALIQTRHMQRRRDVIDDNLAAEVVEEIGDSIWEPPEVQEMMDEIGHPAIPLSV 333
             SVDQHFH LIQTRH+QRRRDV+DD+LA+EV+EE+GDS+ EPPEVQE M+EIG   IPLSV
Sbjct:   255 SVDQHFHTLIQTRHVQRRRDVVDDSLASEVMEEMGDSMLEPPEVQEAMEEIGTSGIPLSV 314

Query:   334 ISKAAEIQLLYAVDRVLLGNRWLRKATGIQPKFPYMVDSFENRSAASFLRASES-TSCLA 392
             ++KAAEIQLLYAVDRVLLG+RW RKATGIQPK PY+VDSFE RSA S  RAS S T CL 
Sbjct:   315 VAKAAEIQLLYAVDRVLLGSRWFRKATGIQPKLPYLVDSFERRSAFSIQRASGSATRCLG 374

Query:   393 NS-ETNNGSSDLKLEDKHLDKRDQRPDFR-FPFGDWFRHLWS-KQDCEAQGSSY---IEC 446
             +S E +  +S L++ED    + ++R     FPFGDW  H  S K+    +GSS    +E 
Sbjct:   375 DSVEADTSASLLRVEDDSPSEAEKRQQHLWFPFGDWISHSVSRKEHTHHKGSSDQRDMES 434

Query:   447 TKRNLQLNPFLPKVTMVGISTGEAGQMTKANLKKTMENLTKELEQTDQENATSSGSNEYI 506
              +R +  +PFLPK+TMVGISTGEA QM+KANLKKTME+LT++LEQ+D+ N    GS  Y 
Sbjct:   435 REREMLRSPFLPKITMVGISTGEAAQMSKANLKKTMEDLTEDLEQSDEGN--DHGSKRYD 492

Query:   507 ---IEDRDPLFVANVGGYYSGLAKTGSTRWVR 535
                IE+RDPLFVANVG YYSGLAK GS R  R
Sbjct:   493 SLKIEERDPLFVANVGDYYSGLAKAGSARLSR 524


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      540       486   0.00081  119 3  11 22  0.40    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  621 (66 KB)
  Total size of DFA:  292 KB (2152 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  43.70u 0.08s 43.78t   Elapsed:  00:00:02
  Total cpu time:  43.70u 0.08s 43.78t   Elapsed:  00:00:02
  Start:  Tue May 21 08:36:51 2013   End:  Tue May 21 08:36:53 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009165 "nucleotide biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	540
pfam04278	270	pfam04278, Tic22, Tic22-like family	4e-10

>gnl|CDD|218002 pfam04278, Tic22, Tic22-like family

 Score = 60.5 bits (147), Expect = 4e-10
 Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 15/132 (11%)

Query: 154 TKSERNGPVFRFFMDLGDAVTYVKQL-----NIPSGV-VGACRLDLAYE-----HFKEKP 202
            K+     V   F    DA  ++K+L      + SG  V    L   Y+       K + 
Sbjct: 88  GKNGGGKSVGLLFFSQEDAEAFLKELKKQNPELASGAKVVPISLGQVYKLAQSNQKKVEG 147

Query: 203 HLFQFVPNEKQVKAANKLLRTIPDSGRK-KKVDGVPVFSAQNLDIAIATADGIKWYTPYF 261
             F+FVP+ KQVK A +LL+    +G+      GVPVF A++ +  +      K Y P+F
Sbjct: 148 LAFRFVPDPKQVKNALELLKK---NGQNVNDFRGVPVFQARSGEGYLTIQQDNKQYIPFF 204

Query: 262 FDKNMLDNILEE 273
           F K  L  +L+ 
Sbjct: 205 FSKEDLQRMLDR 216

The preprotein translocation at the inner envelope membrane of chloroplasts so far involves five proteins: Tic110, Tic55, Tic40, Tic22 (this family) and Tic20. The molecular function of these proteins has not yet been established. Length = 270

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	540
PF04278	274	Tic22: Tic22-like family; InterPro: IPR007378 Chlo	99.97
TIGR00995	270	3a0901s06TIC22 chloroplast protein import componen	99.96
PF04278	274	Tic22: Tic22-like family; InterPro: IPR007378 Chlo	95.34
TIGR00995	270	3a0901s06TIC22 chloroplast protein import componen	90.07

>PF04278 Tic22: Tic22-like family; InterPro: IPR007378 Chloroplast function requires the import of nuclear encoded proteins from the cytoplasm across the chloroplast double membrane

Probab=99.97  E-value=2.1e-30  Score=252.00  Aligned_cols=114  Identities=35%  Similarity=0.493  Sum_probs=93.7

Q ss_pred             CCceEEEEeehhHHHHHHHHhCCC------CceEEEeehhHHHHhhh-----cCCceeeEecCHHHHHHHHHHHHHCCCC
Q 009199          159 NGPVFRFFMDLGDAVTYVKQLNIP------SGVVGACRLDLAYEHFK-----EKPHLFQFVPNEKQVKAANKLLRTIPDS  227 (540)
Q Consensus       159 n~sV~~fFms~~DA~AyV~rLkkp------s~kVgpVSLd~aYE~~K-----ekpv~FrFVPdekQVKaAkkLLK~~GQg  227 (540)
                      +.+|+.|||+++||++||++|++.      +++|+||+||+|||+++     .+++.|+|+|+++||++|++||++.|+ 
T Consensus        97 ~~~v~~~F~s~~dA~~~L~~lk~~~p~~~~~~kV~pvsL~~vY~l~~~~~~k~~~~~F~~vP~~~qV~~A~~ll~~~g~-  175 (274)
T PF04278_consen   97 GKSVGLFFFSQQDAEAFLAQLKKSNPELASGAKVVPVSLGKVYQLAQENKKKPEGLQFRFVPDPKQVEAALELLKKQGQ-  175 (274)
T ss_dssp             -SEEEEEES-HHHHHHHHHHHHH-SSHHHTT-EEEEEEHHHHHHHHHHTTT-TT-EEEEEE--HHHHHHHHHHHHTTT--
T ss_pred             CceEEEEEecHHHHHHHHHHHhhhCccccCceEEEEecHHHHHHHHHHhhcCCcCceEEEcCCHHHHHHHHHHHHhcCC-
Confidence            788999999999999999999874      78999999999999955     679999999999999999999999999 


Q ss_pred             CCCCCcCCceeeeeec----eeeeeeccCCCeeeeecccchhhHHHHHHHHHHHH
Q 009199          228 GRKKKVDGVPVFSAQN----LDIAIATADGIKWYTPYFFDKNMLDNILEESVDQH  278 (540)
Q Consensus       228 ~~~kqF~GVPVF~Ar~----LtIavat~dGnK~yiPlFFdKEDLD~iLEqsKdQ~  278 (540)
                       .+++|+|||||++++    |+|    +++++||||+||+||||+++|+++++|+
T Consensus       176 -~~~~f~GVPvF~~~~~~~~Lti----~~~~~~~iPlFF~kedL~~~l~k~~kq~  225 (274)
T PF04278_consen  176 -KVKQFQGVPVFYAEGGKGYLTI----KQDNKRIIPLFFDKEDLQAALEKAKKQQ  225 (274)
T ss_dssp             ---S---S-EEEEEESST-B-EE----TTTTEEEEEEESSHHHHHHHHHHHTTT-
T ss_pred             -CcccCCCeEEEEEcCCCceEEE----eeCCeEEEEEEecHHHHHHHHHHHHHhC
Confidence             669999999999999    988    6899999999999999999999998886

This is accompished by two protein complexes, the Toc complex located at the outer membrane and the Tic complex loacted at the inner membrane []. The Toc complex recognises specific proteins by a cleavable N-terminal sequence and is primarily responsible for translocation through the outer membrane, while the Tic complex translocates the protein through the inner membrane. This entry represents Tic22, a core member of the Tic complex. It is believed to act as a link between both protein complexes, contacting the translocated protein in the intermembrane space after transport through the Toc complex, and directing it to the Tic complex [].; PDB: 4EV1_A.

>TIGR00995 3a0901s06TIC22 chloroplast protein import component, Tic22 family

Probab=99.96  E-value=4.7e-29  Score=244.26  Aligned_cols=128  Identities=23%  Similarity=0.340  Sum_probs=113.2

Q ss_pred             eeeecccCCCceeeeeeccccCcccccCHHHHHHHHhHHhccCCCCceEEEEeehhH-HHHHHHHhCCC------CceEE
Q 009199          115 VFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGD-AVTYVKQLNIP------SGVVG  187 (540)
Q Consensus       115 vfsmcd~sg~glmavst~f~iPfi~krt~~w~k~~~~~l~~se~n~sV~~fFms~~D-A~AyV~rLkkp------s~kVg  187 (540)
                      |||++|-.|.-|.+...                          +++.++++||+++| |++||++||+.      +++|+
T Consensus        84 VFtItn~~G~pvl~s~~--------------------------~~~~~~gvf~s~qedA~afL~~lk~~~p~l~~~~kV~  137 (270)
T TIGR00995        84 VFTVSNAQNEFVLASDN--------------------------DGEKSIGLLCFRQEDAEAFLAQLRKRKPEVGSQAKVV  137 (270)
T ss_pred             eEEEEcCCCCeEEEECC--------------------------CCCceEEEEECCHHHHHHHHHHHHhhCccccCCceEE
Confidence            79999999998887633                          35678899999886 99999999774      67999


Q ss_pred             EeehhHHHHhhhcCCceeeEecCHHHHHHHHHHHHHCCCCCCCCCcCCceeeeeeceeeeeeccCCCeeeeecccchhhH
Q 009199          188 ACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKVDGVPVFSAQNLDIAIATADGIKWYTPYFFDKNML  267 (540)
Q Consensus       188 pVSLd~aYE~~Kekpv~FrFVPdekQVKaAkkLLK~~GQg~~~kqF~GVPVF~Ar~LtIavat~dGnK~yiPlFFdKEDL  267 (540)
                      ||+||+|||+ +.+++.|+|+|+++||++|++|+ +.++    +.|+|||||++..|||    +++|++|||+||+||||
T Consensus       138 pvsL~~vYkl-~~e~l~F~fiP~~~qV~~A~~ll-~~~~----~~~~GVPlF~~~~Lti----~~~n~~~iP~FF~Kedl  207 (270)
T TIGR00995       138 PITLDQVYKL-KVEGIGFRFLPDPAQIKNALELP-AANS----EYFDGVPVFQSGLLVV----QKKNERYCPVYFSKEDI  207 (270)
T ss_pred             EEEHHHHHHH-hhcCccEEEeCCHHHHHHHHHHH-hcCc----cCCCCccEEeecceEE----EeCCeEEEeeEeeHHHH
Confidence            9999999999 45559999999999999999999 3334    6678999999999999    69999999999999999


Q ss_pred             HHHHHHHHHHH
Q 009199          268 DNILEESVDQH  278 (540)
Q Consensus       268 D~iLEqsKdQ~  278 (540)
                      |++|+++++|+
T Consensus       208 q~~L~~~kkq~  218 (270)
T TIGR00995       208 EQELSKFKRES  218 (270)
T ss_pred             HHHHHHHhHhC
Confidence            99999999885

Two families of proteins are involved in the chloroplast envelope import appartus.They are the three proteins of the outer membrane (TOC) and four proteins in the inner membrane (TIC). This family is specific for the Tic22 protein.

>PF04278 Tic22: Tic22-like family; InterPro: IPR007378 Chloroplast function requires the import of nuclear encoded proteins from the cytoplasm across the chloroplast double membrane

Probab=95.34  E-value=0.026  Score=56.37  Aligned_cols=80  Identities=15%  Similarity=0.276  Sum_probs=59.0

Q ss_pred             ccC-cccccCHHHHHHHHhHHhccCCCCceEEEEeehhHHHHHHHHhCCC------CceEEEeehhHHHHhhhcC----C
Q 009199          134 DIP-FISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVKQLNIP------SGVVGACRLDLAYEHFKEK----P  202 (540)
Q Consensus       134 ~iP-fi~krt~~w~k~~~~~l~~se~n~sV~~fFms~~DA~AyV~rLkkp------s~kVgpVSLd~aYE~~Kek----p  202 (540)
                      +|| |+.+-.+       .-|+....+..+.=+||+++|+++.+++.++.      +.+|..++|..+-+.++++    -
T Consensus       182 GVPvF~~~~~~-------~~Lti~~~~~~~iPlFF~kedL~~~l~k~~kq~p~~~~~~~I~V~~Le~vI~~m~~~~d~~~  254 (274)
T PF04278_consen  182 GVPVFYAEGGK-------GYLTIKQDNKRIIPLFFDKEDLQAALEKAKKQQPDLAKEPKIQVVSLEDVIKTMEESDDSDL  254 (274)
T ss_dssp             S-EEEEEESST--------B-EETTTTEEEEEEESSHHHHHHHHHHHTTT-TT-----EEEEEEHHHHHHHHHH---GGG
T ss_pred             CeEEEEEcCCC-------ceEEEeeCCeEEEEEEecHHHHHHHHHHHHHhCCCCcCCceEEEEcHHHHHHHHhcCCCCCc
Confidence            499 8888877       22344445778899999999999999999774      5789999999999998833    4


Q ss_pred             ceeeEecCHHHHHHHHHH
Q 009199          203 HLFQFVPNEKQVKAANKL  220 (540)
Q Consensus       203 v~FrFVPdekQVKaAkkL  220 (540)
                      -.|.|||..+.++-++++
T Consensus       255 ~~i~fiP~~es~~~i~~~  272 (274)
T PF04278_consen  255 KKIVFIPPGESLEFIQSL  272 (274)
T ss_dssp             GGEEEE--HHHHHHHHTS
T ss_pred             ceEEEECCHHHHHHHHHh
Confidence            489999999988877554

This is accompished by two protein complexes, the Toc complex located at the outer membrane and the Tic complex loacted at the inner membrane []. The Toc complex recognises specific proteins by a cleavable N-terminal sequence and is primarily responsible for translocation through the outer membrane, while the Tic complex translocates the protein through the inner membrane. This entry represents Tic22, a core member of the Tic complex. It is believed to act as a link between both protein complexes, contacting the translocated protein in the intermembrane space after transport through the Toc complex, and directing it to the Tic complex [].; PDB: 4EV1_A.

>TIGR00995 3a0901s06TIC22 chloroplast protein import component, Tic22 family

Probab=90.07  E-value=0.82  Score=46.63  Aligned_cols=64  Identities=9%  Similarity=0.160  Sum_probs=51.6

Q ss_pred             CCceEEEEeehhHHHHHHHHhCCC------CceEEEeehhHHHHhhhcC------CceeeEecCHHHHHHHHHHHH
Q 009199          159 NGPVFRFFMDLGDAVTYVKQLNIP------SGVVGACRLDLAYEHFKEK------PHLFQFVPNEKQVKAANKLLR  222 (540)
Q Consensus       159 n~sV~~fFms~~DA~AyV~rLkkp------s~kVgpVSLd~aYE~~Kek------pv~FrFVPdekQVKaAkkLLK  222 (540)
                      |..+.=|||+++|+++.|+++++.      +.+|..++|+.+-+.+++.      --.-.|+|.+.-++-..++.+
T Consensus       194 n~~~iP~FF~Kedlq~~L~~~kkq~p~l~~~~~I~V~~Le~vi~~m~~~~~~~~~~~~I~l~Ps~e~~~~iq~~~~  269 (270)
T TIGR00995       194 NERYCPVYFSKEDIEQELSKFKRESPGMADSQVIMVGSMEDVLSKMETSEKDSGWEDQIFIPPGQEAIQHMQSLIA  269 (270)
T ss_pred             CeEEEeeEeeHHHHHHHHHHHhHhCcCcCCCccEEEEeHHHHHHHHhccCCCCcccceEEECCCHHHHHHHHHHhc
Confidence            455677999999999999999773      6789999999999999852      225679999988887766643

Two families of proteins are involved in the chloroplast envelope import appartus.They are the three proteins of the outer membrane (TOC) and four proteins in the inner membrane (TIC). This family is specific for the Tic22 protein.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	540
4ev1_A	252	Anabena TIC22; TIC22 fold, chaperon, protein trans	9e-25
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06

>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP} Length = 252

 Score =  102 bits (255), Expect = 9e-25
 Identities = 37/202 (18%), Positives = 69/202 (34%), Gaps = 39/202 (19%)

Query: 155 KSERNGPVFRFFMDLGDAVTYVKQLNIPSGV------------VGACRLDLAYEHFKEKP 202
             +  G +   +M   +A  ++ +L                  V A  L + Y+  ++  
Sbjct: 37  GQKAGGSITGAYMSRQEAQAFINELRNAKNKDPKMQEIVKSLQVTAVPLGVIYQQLQQTK 96

Query: 203 H-----LFQFVPNEKQVKAANKLLRTIPDSGRKKKVDGVPVFSA----QNLDIAIATADG 253
                 LF F P ++++K A  LLR      +  +   VP+F+         + I    G
Sbjct: 97  KDPNRLLFAFKPVDQEIKGAMDLLRQSGQ--QVNQFKSVPMFAVRFAPDQGYVPIKVGTG 154

Query: 254 IKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDDNLAAEVVEEIGDSIWE 313
            +   P F  K     +L +   +H  A IQ         V+D +   + +++  D+   
Sbjct: 155 NEQVVPLFLSKQDAQGLLGQVKPKHPKADIQ---------VLDIDGVLQTLQDKNDTWLN 205

Query: 314 -----PPEVQEMMDEIGHPAIP 330
                P    E  + I     P
Sbjct: 206 QVVLVPS--PESREYIRTLPKP 225

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 1e-06
 Identities = 58/432 (13%), Positives = 114/432 (26%), Gaps = 143/432 (33%)

Query: 117 SMC-DLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGP----VFRFFMDLGD 171
            +   +            +I          L++L        +       V     ++ +
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK-----SKPYENCLLVLL---NVQN 255

Query: 172 AVTYVKQLNIPSGVVGACRL----------D----LAYEHFKEKPHLFQFVPNE-KQVKA 216
           A       N+      +C++          D        H     H     P+E K +  
Sbjct: 256 AKA-WNAFNL------SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308

Query: 217 ANKLLRTIPDSGRKKKVDGVPVFSAQNLDIAIATA---DGI-KW--YTPYFFDKNMLDNI 270
             K L   P    ++ +   P        ++I      DG+  W  +     DK  L  I
Sbjct: 309 --KYLDCRPQDLPREVLTTNP------RRLSIIAESIRDGLATWDNWKHVNCDK--LTTI 358

Query: 271 LEESVD--------QHFHALIQTRHMQRRRDVI---DDNLAAEVVEEIGDSIW---EPPE 316
           +E S++        + F  L            +     ++   ++      IW      +
Sbjct: 359 IESSLNVLEPAEYRKMFDRL-----------SVFPPSAHIPTILLS----LIWFDVIKSD 403

Query: 317 VQEMMDE---------------IGHPAIPLSVISKAAEIQLLYA--VDRVLLGNRWLRKA 359
           V  ++++               I  P+I L +  K      L+   VD   +   +    
Sbjct: 404 VMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDD 463

Query: 360 TGIQPKFPY----------------MVDSFEN-----RSAASFLRA---SESTSCLANSE 395
                   Y                 +  F       R    FL      +ST+  A+  
Sbjct: 464 LIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFR----FLEQKIRHDSTAWNASGS 519

Query: 396 TNNGSSDLKLEDKHLDKRDQRP--------DFRFPFGDWFRHLWSKQDCE-------AQG 440
             N    LK    ++   D +         DF     +   +L   +  +       A+ 
Sbjct: 520 ILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEE---NLICSKYTDLLRIALMAED 576

Query: 441 SSYIECTKRNLQ 452
            +  E   + +Q
Sbjct: 577 EAIFEEAHKQVQ 588

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.7 bits (115), Expect = 4e-06
 Identities = 69/555 (12%), Positives = 138/555 (24%), Gaps = 184/555 (33%)

Query: 130 STHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGD------AVTYVKQLNIPS 183
               D   +SK       +LF T+   +    V +F  ++              +   PS
Sbjct: 48  KEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM-VQKFVEEVLRINYKFLMSPIKTEQRQPS 106

Query: 184 GVVGACRLDLAYEHFKEK----PHLFQ--FVPNEKQVKAANKLLRTIPDSGRKKKVDGVP 237
            +         Y   +++      +F    V   +      + L  +    +   +DGV 
Sbjct: 107 MMT------RMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL-RPAKNVLIDGVL 159

Query: 238 VF--------SAQNLDIAIATADGIKWYT------P-----------YFFDKNMLDNI-L 271
                        +  +       I W        P           Y  D N       
Sbjct: 160 GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219

Query: 272 EESVDQHFHALIQ--TRHMQRRR-----DVIDDNLAAEVVE---------------EIGD 309
             ++    H++     R ++ +       V+ +   A+                  ++ D
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTD 279

Query: 310 SI----------------WEPPEVQEM--------MDEI------GHPAIPLSVISKAAE 339
            +                  P EV+ +          ++       +P   LS+I  A  
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP-RRLSII--AES 336

Query: 340 IQLLYAVDRVLLGNRWL-----RKATGIQ-------PK-----------FPY-------- 368
           I+     D +   + W      +  T I+       P            FP         
Sbjct: 337 IR-----DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL 391

Query: 369 ---------------MVDSFENRSAASFLRASESTSCLAN---SETNNGSSDLKLEDKHL 410
                          +V+     S     +  EST  + +          ++  L    +
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLV-EKQPKESTISIPSIYLELKVKLENEYALHRSIV 450

Query: 411 D-----KRDQRPDFRFPFGD--WF----RHLWSKQDCEAQGSSYIECTKRNLQLNPFLP- 458
           D     K     D   P+ D  ++     HL + +                L    FL  
Sbjct: 451 DHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE----HPERMTLFRMVFLDFR-FLEQ 505

Query: 459 KVTMVGISTGEAGQM--TKANLKKTMENLTKELEQTDQ------ENATSSGSNEYIIEDR 510
           K+     +   +G +  T   LK     +     + ++      +       N    +  
Sbjct: 506 KIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYT 565

Query: 511 DPL---FVANVGGYY 522
           D L    +A     +
Sbjct: 566 DLLRIALMAEDEAIF 580

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	540
4ev1_A	252	Anabena TIC22; TIC22 fold, chaperon, protein trans	99.97
4e6z_A	279	Apicoplast TIC22, putative; TIC complex, import pr	99.94
4ev1_A	252	Anabena TIC22; TIC22 fold, chaperon, protein trans	95.08
4e6z_A	279	Apicoplast TIC22, putative; TIC complex, import pr	94.36

>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}

Probab=99.97  E-value=2.7e-31  Score=255.88  Aligned_cols=141  Identities=22%  Similarity=0.387  Sum_probs=120.3

Q ss_pred             eeeecccCCCceeeeeeccccCcccccCHHHHHHHHhHHhccCCCCceEEEEeehhHHHHHHHHhCC-----C-------
Q 009199          115 VFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVKQLNI-----P-------  182 (540)
Q Consensus       115 vfsmcd~sg~glmavst~f~iPfi~krt~~w~k~~~~~l~~se~n~sV~~fFms~~DA~AyV~rLkk-----p-------  182 (540)
                      ||++.|-.|..|++....=.                   .+..-+.+|++||||++||++||++|++     |       
T Consensus        16 VF~Itn~~G~Pll~~~~~~~-------------------~~~~~~~~V~~~F~s~~dA~~~L~~lk~~~~~np~~~~~~~   76 (252)
T 4ev1_A           16 IYLVTNEKGLPLSRPLPNAP-------------------NGQKAGGSITGAYMSRQEAQAFINELRNAKNKDPKMQEIVK   76 (252)
T ss_dssp             EEEEECTTCCBCEEECCCCT-------------------TSCCSCSEEEEEESCHHHHHHHHHHHHHCSSCCHHHHHHHT
T ss_pred             EEEEECCCCCeEEEecCCcc-------------------ccccCCCeEEEEEecHHHHHHHHHHHHhccccCchhhhhcc
Confidence            78899999988887643100                   0111157899999999999999999988     2       


Q ss_pred             CceEEEeehhHHHHhhh-----cCCceeeEecCHHHHHHHHHHHHHCCCCCCCCCcCCceeeeeec------eeeeeecc
Q 009199          183 SGVVGACRLDLAYEHFK-----EKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKVDGVPVFSAQN------LDIAIATA  251 (540)
Q Consensus       183 s~kVgpVSLd~aYE~~K-----ekpv~FrFVPdekQVKaAkkLLK~~GQg~~~kqF~GVPVF~Ar~------LtIavat~  251 (540)
                      +++|+|||||+||++++     ++++.|+|||+++||++|++||++.|+  .+++|+|||||++++      |||+  ..
T Consensus        77 ~~kV~~vsL~~vyql~~~~~~k~~~l~F~fvP~~~qV~~A~~Ll~~~Gq--~~~~f~gVPvF~~~~~~~~~~Lti~--~~  152 (252)
T 4ev1_A           77 SLQVTAVPLGVIYQQLQQTKKDPNRLLFAFKPVDQEIKGAMDLLRQSGQ--QVNQFKSVPMFAVRFAPDQGYVPIK--VG  152 (252)
T ss_dssp             TCEEEEEEHHHHHHHHHHTTTCTTCEEEEEECCHHHHHHHHHHHHTTTC--CCSCCCSCEEEEEESSTTSCBCCEE--ET
T ss_pred             CceEEEeeHHHHHHHHHhhccCCcCceEEEcCCHHHHHHHHHHHHHcCC--CcccCCCccEEEEecCCCCccEEEE--eC
Confidence            68999999999999984     779999999999999999999999998  788999999999995      9994  22


Q ss_pred             CCCeeeeecccchhhHHHHHHHHHHHH
Q 009199          252 DGIKWYTPYFFDKNMLDNILEESVDQH  278 (540)
Q Consensus       252 dGnK~yiPlFFdKEDLD~iLEqsKdQ~  278 (540)
                      ++++|||||||+|||||++|+++++|+
T Consensus       153 ~~~~~~iPlFF~KedL~~~l~~~kkq~  179 (252)
T 4ev1_A          153 TGNEQVVPLFLSKQDAQGLLGQVKPKH  179 (252)
T ss_dssp             TTTEEEEEEESSHHHHHHHHHHHTTTC
T ss_pred             CCCCEEEeeEecHHHHHHHHHHHHHhC
Confidence            239999999999999999999999874

>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}

Probab=99.94  E-value=5.5e-27  Score=228.07  Aligned_cols=128  Identities=21%  Similarity=0.262  Sum_probs=111.3

Q ss_pred             eeeecccCCCceeeeeeccccCcccccCHHHHHHHHhHHhccCCCCceEEEEeehhHHHHHHHHhCC-------CCceEE
Q 009199          115 VFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVKQLNI-------PSGVVG  187 (540)
Q Consensus       115 vfsmcd~sg~glmavst~f~iPfi~krt~~w~k~~~~~l~~se~n~sV~~fFms~~DA~AyV~rLkk-------ps~kVg  187 (540)
                      ||+..|-.|..+++..                           .+.+|+.||||++||++||++|.+       .+++|.
T Consensus        79 VF~Itn~~G~Pll~~~---------------------------~~~~V~~fF~s~~DA~a~L~el~k~~~~~~~~~~kV~  131 (279)
T 4e6z_A           79 VFLITNYNSSPYIFQE---------------------------NEKQVCYMFLCPYDAENMLNDMIKYNGMKYNGNIKIH  131 (279)
T ss_dssp             EEEEECTTCCBCCEEE---------------------------TTEEEEEEESSHHHHHHHHHHHHHHCHHHHTTSCEEE
T ss_pred             EEEEEcCCCCEEEecC---------------------------CCCeEEEEECCHHHHHHHHHHHHhccCcccccCceEE
Confidence            7999999999998632                           245799999999999999988632       278999


Q ss_pred             EeehhHHHHhh-----------------hcCCceeeEecCHHHHHHHHHHHHHCCCCCCCCCcCCceeeeeeceeeeeec
Q 009199          188 ACRLDLAYEHF-----------------KEKPHLFQFVPNEKQVKAANKLLRTIPDSGRKKKVDGVPVFSAQNLDIAIAT  250 (540)
Q Consensus       188 pVSLd~aYE~~-----------------Kekpv~FrFVPdekQVKaAkkLLK~~GQg~~~kqF~GVPVF~Ar~LtIavat  250 (540)
                      |++||+||++.                 +.+++.|+|||+++||++|++|++..|+     +++|||||++++|+|    
T Consensus       132 pvsL~kvy~l~~~~~~~~~~~i~~~~~~k~~~l~fr~vP~~~qV~~A~~ll~~~gq-----~~~gVPVF~~~~Lti----  202 (279)
T 4e6z_A          132 NITMKKAYELMKEFLQLEKMEVNKEDSKKKQNIYWKLISSKRQLQNALYYLSFTKK-----SELMYPVFYAENLYI----  202 (279)
T ss_dssp             EEEHHHHHHHHHHHHHHHHC----------CCEEEEEECCHHHHHHHHTTSCTTTS-----TTCCSEEEEETTCCE----
T ss_pred             EecHHHHHHHHhhcccccchhcccccccCCcceeeEecCCHHHHHHHHHHHHhcCC-----cCCCccEEEEeeEEE----
Confidence            99999999985                 2568999999999999999999988765     588999999999999    


Q ss_pred             cCCCeeeeecccchhhHHHHHHHHHHHH
Q 009199          251 ADGIKWYTPYFFDKNMLDNILEESVDQH  278 (540)
Q Consensus       251 ~dGnK~yiPlFFdKEDLD~iLEqsKdQ~  278 (540)
                      ++|+++|+|+||+||||++++++.+++.
T Consensus       203 ~k~~k~iiPlFF~keDL~~~l~q~~~~~  230 (279)
T 4e6z_A          203 QKDGSNIIPLFFDLEDLKEAIEEQKNKA  230 (279)
T ss_dssp             ECSSSEEEEEESSHHHHHHHHHHHHTTC
T ss_pred             eeCCeEEEeeEecHHHHHHHHHHhhhcC
Confidence            6899999999999999999999866653

>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}

Probab=95.08  E-value=0.0087  Score=58.26  Aligned_cols=84  Identities=19%  Similarity=0.339  Sum_probs=62.9

Q ss_pred             ccC-cccccCHHHHHHHHhHHhccCCCCceEEEEeehhHHHHHHHHhCC--CCceEEEeehhHHHHhhhcCCc----eee
Q 009199          134 DIP-FISKRTPEWLKKLFATITKSERNGPVFRFFMDLGDAVTYVKQLNI--PSGVVGACRLDLAYEHFKEKPH----LFQ  206 (540)
Q Consensus       134 ~iP-fi~krt~~w~k~~~~~l~~se~n~sV~~fFms~~DA~AyV~rLkk--ps~kVgpVSLd~aYE~~Kekpv----~Fr  206 (540)
                      +|| |+.+-.++   .-+=+|..++++..+.=+||+++|+++.|+++++  |..+|..++|..+-+.++++.-    .|.
T Consensus       132 gVPvF~~~~~~~---~~~Lti~~~~~~~~~iPlFF~KedL~~~l~~~kkq~P~~~I~V~~Le~vI~~m~~~~d~~~~~iv  208 (252)
T 4ev1_A          132 SVPMFAVRFAPD---QGYVPIKVGTGNEQVVPLFLSKQDAQGLLGQVKPKHPKADIQVLDIDGVLQTLQDKNDTWLNQVV  208 (252)
T ss_dssp             SCEEEEEESSTT---SCBCCEEETTTTEEEEEEESSHHHHHHHHHHHTTTCTTCEEEEEEHHHHHHHHHHCCCGGGGGEE
T ss_pred             CccEEEEecCCC---CccEEEEeCCCCCEEEeeEecHHHHHHHHHHHHHhCCCCcEEEeeHHHHHHHHhcCcccccceEE
Confidence            588 77764432   2233344444467788899999999999999976  4889999999999999884432    789


Q ss_pred             EecCHHHHHHHHHH
Q 009199          207 FVPNEKQVKAANKL  220 (540)
Q Consensus       207 FVPdekQVKaAkkL  220 (540)
                      |||..+-++-+.+|
T Consensus       209 fiPs~es~e~i~~~  222 (252)
T 4ev1_A          209 LVPSPESREYIRTL  222 (252)
T ss_dssp             EECCHHHHHHHHTS
T ss_pred             EECCHHHHHHHHhc
Confidence            99999877665554

>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}

Probab=94.36  E-value=0.025  Score=55.53  Aligned_cols=42  Identities=21%  Similarity=0.311  Sum_probs=34.0

Q ss_pred             CCcCCceeeeeec-----eeeeeeccCCCeeeeecccchhhHHHHHHHHHH
Q 009199          231 KKVDGVPVFSAQN-----LDIAIATADGIKWYTPYFFDKNMLDNILEESVD  276 (540)
Q Consensus       231 kqF~GVPVF~Ar~-----LtIavat~dGnK~yiPlFFdKEDLD~iLEqsKd  276 (540)
                      +++.+||||...+     |.+    ..+++.+..+||+.+|++++|.+.++
T Consensus        72 EKL~~VPVF~Itn~~G~Pll~----~~~~~~V~~fF~s~~DA~a~L~el~k  118 (279)
T 4e6z_A           72 EKLEVIPVFLITNYNSSPYIF----QENEKQVCYMFLCPYDAENMLNDMIK  118 (279)
T ss_dssp             HHSTTSEEEEEECTTCCBCCE----EETTEEEEEEESSHHHHHHHHHHHHH
T ss_pred             HHhcCCCEEEEEcCCCCEEEe----cCCCCeEEEEECCHHHHHHHHHHHHh
Confidence            5678999999977     444    35668899999999999999976443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00