Citrus Sinensis ID: 009218

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540
MATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLPDMLTT
ccccHHHHHHHHcccccEEEEcccccccccEEEEcccccccccccccEEEEEcccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEcccccccccccccccccccccccccccEEEEEEEEEEEEEccEEEEEEccccccccccccccccEEEcccccccccccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccc
cccccHHHHHHHccccEEEEEccccccccccEEEEEEEEEEEEcccEEEEEEccccccccEEEEEEcccEccccccccccccccccccccccccccccccccccccccccccccEEEcccHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEHHccHHccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHccEEEEEEEEEEccccccccccccccHcccHHHHHHHHHHHHHccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHEEEEEcccccccccccccccccHHHHHHHHcEEEEEEEccEEEEcccEEEEEEccccccccccccccHEEEEEEccccccccccccccccEHHHHHHHHHHHHcccHHHccccccHHHHHHHHHHHHHHHHHHcccHHHcccccEEEEEEEEcccccEccccccccccccccEEEccccccccccccc
MATHDEETKKFFkhssvncvlapryassklsyfkQQIVGTIFTHHQKCVLvdtqasgnnrkITAFIGgidlcdgrydtpehrlfrdldtvfkddfhnptypigtkaprepwhdlhcrldgpaaYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRIswilspelslktngttivprddnvvrvskeddpenwhVQIFRsidsgsvkgfpksiediddqslICAKDVVIDKSIQTAYIQAIRSAQHFIYIENqyflgssyawpsyknagadnliPMELALKIASKIRANERFAVYVIipmwpegdpktnTVQEILFWQSQTMQMMYSVVAQELREmqvdahpqdylSFYClgkreeapkdvlanngdkvsdsqknQRFMIYVHakgmivddeyVIMGSaninqrsmagskdteiamgsyqphhtwarklkhphgqiygYRKSLWSEHLgmldncfeepeslDCIRKVNQIAgenwgrftameftplqghllryplqvdadgtvsplpgyeqfpdaggkiigvhsmslpdmltt
mathdeetkkffkhssvncVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVdtqasgnnrkITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPtypigtkaprepWHDLHCRLDGPAAYDVLINFEQRWrkatklteltfkfkrvshwrddYLIKIGRiswilspelslktngttivprddnvvrvskeddpenwhvqifrsidsgsvkgFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPmwpegdpkTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLanngdkvsdsqknqRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLPDMLTT
MATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLPDMLTT
**********FFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRV******ENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGK***********************RFMIYVHAKGMIVDDEYVIMGSANI*************AMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGV***********
***HDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGD***NTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHH******KHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLPDMLTT
************KHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLPDMLTT
*****EETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLP*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLPDMLTT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query540 2.2.26 [Sep-21-2011]
Q9C5Y0868 Phospholipase D delta OS= yes no 1.0 0.622 0.744 0.0
P937331083 Phospholipase D beta 1 OS no no 0.937 0.467 0.582 0.0
Q9T052866 Phospholipase D gamma 3 O no no 0.940 0.586 0.551 1e-180
O23078927 Phospholipase D beta 2 OS no no 0.940 0.548 0.556 1e-180
Q9T053858 Phospholipase D gamma 1 O no no 0.940 0.592 0.552 1e-178
Q9T051856 Phospholipase D gamma 2 O no no 0.948 0.598 0.535 1e-176
P93400808 Phospholipase D alpha 1 O N/A no 0.935 0.625 0.493 1e-150
Q43270812 Phospholipase D alpha 1 O N/A no 0.937 0.623 0.489 1e-149
O04865809 Phospholipase D alpha 1 O N/A no 0.937 0.625 0.500 1e-148
Q43007812 Phospholipase D alpha 1 O no no 0.935 0.621 0.488 1e-148
>sp|Q9C5Y0|PLDD1_ARATH Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2 Back     alignment and function desciption
 Score =  879 bits (2270), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/551 (74%), Positives = 464/551 (84%), Gaps = 11/551 (1%)

Query: 1   MATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQ-----------IVGTIFTHHQKCV 49
           M THDEET+KFFKHSSV CVL+PRYASSKL  FKQQ           +VGT+FTHHQKCV
Sbjct: 318 MGTHDEETRKFFKHSSVICVLSPRYASSKLGLFKQQASPSSSIYIMTVVGTLFTHHQKCV 377

Query: 50  LVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPRE 109
           LVDTQA GNNRK+TAFIGG+DLCDGRYDTPEHR+  DLDTVFKDDFHNPT+P GTKAPR+
Sbjct: 378 LVDTQAVGNNRKVTAFIGGLDLCDGRYDTPEHRILHDLDTVFKDDFHNPTFPAGTKAPRQ 437

Query: 110 PWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILS 169
           PWHDLHCR+DGPAAYDVLINFEQRWRKAT+  E + + K  +HW+DD LI+IGRISWILS
Sbjct: 438 PWHDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTHWQDDALIRIGRISWILS 497

Query: 170 PELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLI 229
           P      +GT+I+P DD  V VSKEDDPENWHVQIFRSIDSGSVKGFPK  ++ + Q L 
Sbjct: 498 PVFKFLKDGTSIIPEDDPCVWVSKEDDPENWHVQIFRSIDSGSVKGFPKYEDEAEAQHLE 557

Query: 230 CAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKI 289
           CAK +V+DKSIQTAYIQ IRSAQHFIYIENQYFLGSSYAWPSY++AGADNLIPMELALKI
Sbjct: 558 CAKRLVVDKSIQTAYIQTIRSAQHFIYIENQYFLGSSYAWPSYRDAGADNLIPMELALKI 617

Query: 290 ASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHP 349
            SKIRA ERFAVYV+IP+WPEGDPK+  VQEIL+WQSQTMQMMY V+A+EL+ +Q DAHP
Sbjct: 618 VSKIRAKERFAVYVVIPLWPEGDPKSGPVQEILYWQSQTMQMMYDVIAKELKAVQSDAHP 677

Query: 350 QDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANIN 409
            DYL+FYCLGKRE+ P D+ A NG  VSDS   QRFMIYVHAKGMIVDDEYV+MGSANIN
Sbjct: 678 LDYLNFYCLGKREQLPDDMPATNGSVVSDSYNFQRFMIYVHAKGMIVDDEYVLMGSANIN 737

Query: 410 QRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLD 469
           QRSMAG+KDTEIAMG+YQP+HTWA K +HP GQ+YGYR SLW+EHLG   + F EP  L+
Sbjct: 738 QRSMAGTKDTEIAMGAYQPNHTWAHKGRHPRGQVYGYRMSLWAEHLGKTGDEFVEPSDLE 797

Query: 470 CIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGV 529
           C++KVN I+ ENW RF   +F+ LQGHL++YPLQVD DG VSPLP YE FPD GGKIIG 
Sbjct: 798 CLKKVNTISEENWKRFIDPKFSELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIGA 857

Query: 530 HSMSLPDMLTT 540
           HSM+LPD LTT
Sbjct: 858 HSMALPDTLTT 868
Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. May be involved in phosphatidic acid accumulation in the dehydration stress response and in the transduction of hormonal and environmental signals to the microtubules cytoskeleton.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 4EC: .EC: 4
>sp|P93733|PLDB1_ARATH Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=4 Back     alignment and function description
>sp|Q9T052|PLDG3_ARATH Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1 Back     alignment and function description
>sp|O23078|PLDB2_ARATH Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=3 Back     alignment and function description
>sp|Q9T053|PLDG1_ARATH Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1 Back     alignment and function description
>sp|Q9T051|PLDG2_ARATH Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3 Back     alignment and function description
>sp|P93400|PLDA1_TOBAC Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2 Back     alignment and function description
>sp|Q43270|PLDA1_MAIZE Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 SV=1 Back     alignment and function description
>sp|O04865|PLDA1_VIGUN Phospholipase D alpha 1 OS=Vigna unguiculata GN=PLD1 PE=2 SV=1 Back     alignment and function description
>sp|Q43007|PLDA1_ORYSJ Phospholipase D alpha 1 OS=Oryza sativa subsp. japonica GN=PLD1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query540
338795736 865 phospholipase D delta [Litchi chinensis] 1.0 0.624 0.790 0.0
333595913 865 phospholipase D delta [Dimocarpus longan 1.0 0.624 0.788 0.0
312283027 860 unnamed protein product [Thellungiella h 1.0 0.627 0.762 0.0
359496145 872 PREDICTED: phospholipase D delta-like [V 1.0 0.619 0.751 0.0
30690488 857 phospholipase D delta [Arabidopsis thali 1.0 0.630 0.759 0.0
15983515 848 AT4g35790/F4B14_60 [Arabidopsis thaliana 1.0 0.636 0.759 0.0
224133556 881 predicted protein [Populus trichocarpa] 1.0 0.612 0.763 0.0
15592894 656 phospholipase D-like protein p98, partia 1.0 0.823 0.759 0.0
7486399 1071 hypothetical protein F4B14.60 - Arabidop 1.0 0.504 0.744 0.0
297798338 869 atplddelta [Arabidopsis lyrata subsp. ly 1.0 0.621 0.742 0.0
>gi|338795736|gb|AEI99558.1| phospholipase D delta [Litchi chinensis] Back     alignment and taxonomy information
 Score =  925 bits (2391), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/544 (79%), Positives = 487/544 (89%), Gaps = 4/544 (0%)

Query: 1   MATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNR 60
           M THDEET+KFFKHSSVNCVLAPRYASSKL  FKQQ+VGT+FTHHQKCV+VDTQASGNNR
Sbjct: 322 MGTHDEETRKFFKHSSVNCVLAPRYASSKLGIFKQQVVGTMFTHHQKCVIVDTQASGNNR 381

Query: 61  KITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDG 120
           KITAFIGGIDLCDGRYDTPEHRLFRDL+T+F+ DFHNPTYP   KAPR+PWHDLHCR+DG
Sbjct: 382 KITAFIGGIDLCDGRYDTPEHRLFRDLNTIFEGDFHNPTYPSTVKAPRQPWHDLHCRIDG 441

Query: 121 PAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTT 180
           PAAYDVLINFEQRWRK+TK  E + KFK+VSHW DD LIKI RISWILSPELS    GTT
Sbjct: 442 PAAYDVLINFEQRWRKSTKWKEFSLKFKKVSHWHDDSLIKIERISWILSPELSSTREGTT 501

Query: 181 IVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKS--IEDIDDQSLICAKDVVIDK 238
           IVP DD +VRVS E +PENWHVQ+FRSIDSGS+KGFPKS  I+ I++Q+L+CAKD+VI+K
Sbjct: 502 IVPTDDRIVRVSDEKNPENWHVQVFRSIDSGSLKGFPKSINIKQIEEQNLLCAKDLVIEK 561

Query: 239 SIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANER 298
           SIQ AYIQAIRSAQH+IYIENQYFLGSSYAWPSYK+AGADNLIPMELALKIASKIRA ER
Sbjct: 562 SIQAAYIQAIRSAQHYIYIENQYFLGSSYAWPSYKDAGADNLIPMELALKIASKIRAKER 621

Query: 299 FAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQ--VDAHPQDYLSFY 356
           FAVY+IIPMWPEGDPK NTVQEILFWQSQTMQMMY++VAQ L++MQ  +D+HPQDYL+FY
Sbjct: 622 FAVYIIIPMWPEGDPKDNTVQEILFWQSQTMQMMYNIVAQALKDMQMDMDSHPQDYLNFY 681

Query: 357 CLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGS 416
           CLG REE PKD    NG  VS+SQKN+RFMIYVHAKG+IVDDEYVI+GSANINQRSMAG+
Sbjct: 682 CLGNREELPKDASNTNGATVSESQKNRRFMIYVHAKGIIVDDEYVIVGSANINQRSMAGT 741

Query: 417 KDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQ 476
           KDTEIAMG+YQPHHTWA+K K P GQ+YGYR SLW+EHLG L++ F+EPESL+C+++VN 
Sbjct: 742 KDTEIAMGAYQPHHTWAKKKKRPFGQVYGYRMSLWAEHLGELESHFKEPESLECVKRVND 801

Query: 477 IAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLPD 536
           IA ENW RFTA +FT LQGHLL+YPL +  DG V PLPG+E FPDAGG++IG+HSM LPD
Sbjct: 802 IADENWKRFTAPDFTLLQGHLLKYPLHICKDGKVEPLPGHENFPDAGGRVIGIHSMRLPD 861

Query: 537 MLTT 540
           +LTT
Sbjct: 862 VLTT 865

Source: Litchi chinensis

Species: Litchi chinensis

Genus: Litchi

Family: Sapindaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|333595913|gb|AEF58504.1| phospholipase D delta [Dimocarpus longan] Back     alignment and taxonomy information
>gi|312283027|dbj|BAJ34379.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|359496145|ref|XP_002270350.2| PREDICTED: phospholipase D delta-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|30690488|ref|NP_849501.1| phospholipase D delta [Arabidopsis thaliana] gi|12484119|gb|AAG53975.1|AF322228_1 phospholipase D delta [Arabidopsis thaliana] gi|15987418|gb|AAL11978.1|AF306345_1 phospholipase D [Arabidopsis thaliana] gi|110742679|dbj|BAE99251.1| phospholipase D [Arabidopsis thaliana] gi|332661171|gb|AEE86571.1| phospholipase D delta [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15983515|gb|AAL11625.1|AF424632_1 AT4g35790/F4B14_60 [Arabidopsis thaliana] gi|21360475|gb|AAM47353.1| AT4g35790/F4B14_60 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224133556|ref|XP_002327624.1| predicted protein [Populus trichocarpa] gi|222836709|gb|EEE75102.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15592894|gb|AAL02150.1|AF274239_1 phospholipase D-like protein p98, partial [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|7486399|pir||T04689 hypothetical protein F4B14.60 - Arabidopsis thaliana gi|3805845|emb|CAA21465.1| putative protein [Arabidopsis thaliana] gi|7270531|emb|CAB81488.1| putative protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297798338|ref|XP_002867053.1| atplddelta [Arabidopsis lyrata subsp. lyrata] gi|297312889|gb|EFH43312.1| atplddelta [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query540
TAIR|locus:2125314868 PLDDELTA "phospholipase D delt 1.0 0.622 0.744 1.1e-231
TAIR|locus:20646071083 PLDBETA1 "phospholipase D beta 0.937 0.467 0.589 9.4e-169
TAIR|locus:2126001927 PLDBETA2 "phospholipase D beta 0.959 0.558 0.554 9e-164
TAIR|locus:2137035866 PLDGAMMA3 "phospholipase D gam 0.940 0.586 0.558 1.3e-162
TAIR|locus:2137045858 PLDGAMMA1 "phospholipase D gam 0.959 0.603 0.554 5.7e-162
TAIR|locus:2137025856 PLDGAMMA2 "phospholipase D gam 0.953 0.601 0.551 3.2e-159
UNIPROTKB|P86387808 PLD1 "Phospholipase D alpha 1" 0.709 0.474 0.479 1.5e-136
TAIR|locus:2093227810 PLDALPHA1 "phospholipase D alp 0.712 0.475 0.488 1.9e-136
TAIR|locus:2035211810 PLDALPHA2 "phospholipase D alp 0.670 0.446 0.503 1.9e-136
TAIR|locus:2145452820 PLDALPHA3 "phospholipase D alp 0.646 0.425 0.509 2e-134
TAIR|locus:2125314 PLDDELTA "phospholipase D delta" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2235 (791.8 bits), Expect = 1.1e-231, P = 1.1e-231
 Identities = 410/551 (74%), Positives = 464/551 (84%)

Query:     1 MATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQ-----------IVGTIFTHHQKCV 49
             M THDEET+KFFKHSSV CVL+PRYASSKL  FKQQ           +VGT+FTHHQKCV
Sbjct:   318 MGTHDEETRKFFKHSSVICVLSPRYASSKLGLFKQQASPSSSIYIMTVVGTLFTHHQKCV 377

Query:    50 LVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPRE 109
             LVDTQA GNNRK+TAFIGG+DLCDGRYDTPEHR+  DLDTVFKDDFHNPT+P GTKAPR+
Sbjct:   378 LVDTQAVGNNRKVTAFIGGLDLCDGRYDTPEHRILHDLDTVFKDDFHNPTFPAGTKAPRQ 437

Query:   110 PWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILS 169
             PWHDLHCR+DGPAAYDVLINFEQRWRKAT+  E + + K  +HW+DD LI+IGRISWILS
Sbjct:   438 PWHDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTHWQDDALIRIGRISWILS 497

Query:   170 PELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLI 229
             P      +GT+I+P DD  V VSKEDDPENWHVQIFRSIDSGSVKGFPK  ++ + Q L 
Sbjct:   498 PVFKFLKDGTSIIPEDDPCVWVSKEDDPENWHVQIFRSIDSGSVKGFPKYEDEAEAQHLE 557

Query:   230 CAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKI 289
             CAK +V+DKSIQTAYIQ IRSAQHFIYIENQYFLGSSYAWPSY++AGADNLIPMELALKI
Sbjct:   558 CAKRLVVDKSIQTAYIQTIRSAQHFIYIENQYFLGSSYAWPSYRDAGADNLIPMELALKI 617

Query:   290 ASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHP 349
              SKIRA ERFAVYV+IP+WPEGDPK+  VQEIL+WQSQTMQMMY V+A+EL+ +Q DAHP
Sbjct:   618 VSKIRAKERFAVYVVIPLWPEGDPKSGPVQEILYWQSQTMQMMYDVIAKELKAVQSDAHP 677

Query:   350 QDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANIN 409
              DYL+FYCLGKRE+ P D+ A NG  VSDS   QRFMIYVHAKGMIVDDEYV+MGSANIN
Sbjct:   678 LDYLNFYCLGKREQLPDDMPATNGSVVSDSYNFQRFMIYVHAKGMIVDDEYVLMGSANIN 737

Query:   410 QRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLD 469
             QRSMAG+KDTEIAMG+YQP+HTWA K +HP GQ+YGYR SLW+EHLG   + F EP  L+
Sbjct:   738 QRSMAGTKDTEIAMGAYQPNHTWAHKGRHPRGQVYGYRMSLWAEHLGKTGDEFVEPSDLE 797

Query:   470 CIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGV 529
             C++KVN I+ ENW RF   +F+ LQGHL++YPLQVD DG VSPLP YE FPD GGKIIG 
Sbjct:   798 CLKKVNTISEENWKRFIDPKFSELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIGA 857

Query:   530 HSMSLPDMLTT 540
             HSM+LPD LTT
Sbjct:   858 HSMALPDTLTT 868
GO:0003824 "catalytic activity" evidence=IEA
GO:0004630 "phospholipase D activity" evidence=IEA;ISS;IMP;IDA
GO:0005509 "calcium ion binding" evidence=IEA
GO:0016020 "membrane" evidence=IEA;IDA
GO:0046473 "phosphatidic acid metabolic process" evidence=IMP
GO:0012501 "programmed cell death" evidence=IMP
GO:0009409 "response to cold" evidence=IEP;IMP
GO:0005773 "vacuole" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0009789 "positive regulation of abscisic acid mediated signaling pathway" evidence=IMP
GO:0090333 "regulation of stomatal closure" evidence=IMP
TAIR|locus:2064607 PLDBETA1 "phospholipase D beta 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2126001 PLDBETA2 "phospholipase D beta 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137035 PLDGAMMA3 "phospholipase D gamma 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137045 PLDGAMMA1 "phospholipase D gamma 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137025 PLDGAMMA2 "phospholipase D gamma 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P86387 PLD1 "Phospholipase D alpha 1" [Carica papaya (taxid:3649)] Back     alignment and assigned GO terms
TAIR|locus:2093227 PLDALPHA1 "phospholipase D alpha 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035211 PLDALPHA2 "phospholipase D alpha 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145452 PLDALPHA3 "phospholipase D alpha 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9C5Y0PLDD1_ARATH3, ., 1, ., 4, ., 40.74411.00.6221yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.4.40.914
3rd Layer3.1.40.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query540
PLN03008868 PLN03008, PLN03008, Phospholipase D delta 0.0
PLN02270808 PLN02270, PLN02270, phospholipase D alpha 0.0
PLN02352758 PLN02352, PLN02352, phospholipase D epsilon 1e-156
cd09200211 cd09200, PLDc_pPLDbeta_2, Catalytic domain, repeat 1e-118
cd09142208 cd09142, PLDc_pPLD_like_2, Catalytic domain, repea 1e-106
cd09199211 cd09199, PLDc_pPLDalpha_2, Catalytic domain, repea 1e-86
cd09198180 cd09198, PLDc_pPLDbeta_1, Catalytic domain, repeat 1e-50
cd09141183 cd09141, PLDc_vPLD1_2_yPLD_like_2, Catalytic domai 5e-48
cd09139176 cd09139, PLDc_pPLD_like_1, Catalytic domain, repea 8e-41
pfam1235774 pfam12357, PLD_C, Phospholipase D C terminal 1e-39
cd09105146 cd09105, PLDc_vPLD1_2_like_2, Catalytic domain, re 1e-33
cd09197178 cd09197, PLDc_pPLDalpha_1, Catalytic domain, repea 9e-31
cd09844182 cd09844, PLDc_vPLD1_2, Catalytic domain, repeat 2, 2e-27
PLN028661068 PLN02866, PLN02866, phospholipase D 7e-27
cd09845182 cd09845, PLDc_vPLD2_2, Catalytic domain, repeat 2, 1e-25
cd09143142 cd09143, PLDc_vPLD1_2_like_bac_2, Catalytic domain 3e-20
PLN02866 1068 PLN02866, PLN02866, phospholipase D 1e-18
cd09104147 cd09104, PLDc_vPLD1_2_like_1, Catalytic domain, re 7e-14
COG1502438 COG1502, Cls, Phosphatidylserine/phosphatidylglyce 2e-12
cd09138146 cd09138, PLDc_vPLD1_2_yPLD_like_1, Catalytic domai 6e-12
cd09140146 cd09140, PLDc_vPLD1_2_like_bac_1, Catalytic domain 1e-08
smart0015528 smart00155, PLDc, Phospholipase D 3e-06
cd09128142 cd09128, PLDc_unchar1_2, Putative catalytic domain 1e-05
pfam0061428 pfam00614, PLDc, Phospholipase D Active site motif 3e-05
cd00138119 cd00138, PLDc_SF, Catalytic domain of phospholipas 5e-05
cd09162172 cd09162, PLDc_CLS_unchar1_2, Putative catalytic do 7e-05
cd09112174 cd09112, PLDc_CLS_2, catalytic domain repeat 2 of 8e-05
cd09110154 cd09110, PLDc_CLS_1, Catalytic domain, repeat 1, o 9e-05
pfam13091129 pfam13091, PLDc_2, PLD-like domain 1e-04
cd09842151 cd09842, PLDc_vPLD1_1, Catalytic domain, repeat 1, 2e-04
cd09113218 cd09113, PLDc_ymdC_like_2, Putative catalytic doma 6e-04
cd09159170 cd09159, PLDc_ybhO_like_2, Catalytic domain, repea 0.003
>gnl|CDD|178585 PLN03008, PLN03008, Phospholipase D delta Back     alignment and domain information 
 Score =  888 bits (2295), Expect = 0.0
 Identities = 410/551 (74%), Positives = 464/551 (84%), Gaps = 11/551 (1%)

Query: 1   MATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQ-----------IVGTIFTHHQKCV 49
           M THDEET+KFFKHSSV CVL+PRYASSKL  FKQQ           +VGT+FTHHQKCV
Sbjct: 318 MGTHDEETRKFFKHSSVICVLSPRYASSKLGLFKQQASPIFSIYVMTVVGTLFTHHQKCV 377

Query: 50  LVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPRE 109
           LVDTQA GNNRK+TAFIGG+DLCDGRYDTPEHR+  DLDTVFKDDFHNPT+P GTKAPR+
Sbjct: 378 LVDTQAVGNNRKVTAFIGGLDLCDGRYDTPEHRILHDLDTVFKDDFHNPTFPAGTKAPRQ 437

Query: 110 PWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILS 169
           PWHDLHCR+DGPAAYDVLINFEQRWRKAT+  E + + K  +HW+DD LI+IGRISWILS
Sbjct: 438 PWHDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTHWQDDALIRIGRISWILS 497

Query: 170 PELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLI 229
           P      +GT+I+P DD  V VSKEDDPENWHVQIFRSIDSGSVKGFPK  ++ + Q L 
Sbjct: 498 PVFKFLKDGTSIIPEDDPCVWVSKEDDPENWHVQIFRSIDSGSVKGFPKYEDEAEAQHLE 557

Query: 230 CAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKI 289
           CAK +V+DKSIQTAYIQ IRSAQHFIYIENQYFLGSSYAWPSY++AGADNLIPMELALKI
Sbjct: 558 CAKRLVVDKSIQTAYIQTIRSAQHFIYIENQYFLGSSYAWPSYRDAGADNLIPMELALKI 617

Query: 290 ASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHP 349
            SKIRA ERFAVYV+IP+WPEGDPK+  VQEIL+WQSQTMQMMY V+A+EL+ +Q DAHP
Sbjct: 618 VSKIRAKERFAVYVVIPLWPEGDPKSGPVQEILYWQSQTMQMMYDVIAKELKAVQSDAHP 677

Query: 350 QDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANIN 409
            DYL+FYCLGKRE+ P D+ A NG  VSDS   QRFMIYVHAKGMIVDDEYV+MGSANIN
Sbjct: 678 LDYLNFYCLGKREQLPDDMPATNGSVVSDSYNFQRFMIYVHAKGMIVDDEYVLMGSANIN 737

Query: 410 QRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLD 469
           QRSMAG+KDTEIAMG+YQP+HTWA K +HP GQ+YGYR SLW+EHLG   + F EP  L+
Sbjct: 738 QRSMAGTKDTEIAMGAYQPNHTWAHKGRHPRGQVYGYRMSLWAEHLGKTGDEFVEPSDLE 797

Query: 470 CIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGV 529
           C++KVN I+ ENW RF   +F+ LQGHL++YPLQVD DG VSPLP YE FPD GGKIIG 
Sbjct: 798 CLKKVNTISEENWKRFIDPKFSELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIGA 857

Query: 530 HSMSLPDMLTT 540
           HSM+LPD LTT
Sbjct: 858 HSMALPDTLTT 868

Length = 868
>gnl|CDD|165912 PLN02270, PLN02270, phospholipase D alpha Back     alignment and domain information
>gnl|CDD|215202 PLN02352, PLN02352, phospholipase D epsilon Back     alignment and domain information
>gnl|CDD|197296 cd09200, PLDc_pPLDbeta_2, Catalytic domain, repeat 2, of plant beta-type phospholipase D Back     alignment and domain information
>gnl|CDD|197240 cd09142, PLDc_pPLD_like_2, Catalytic domain, repeat 2, of plant phospholipase D and similar proteins Back     alignment and domain information
>gnl|CDD|197295 cd09199, PLDc_pPLDalpha_2, Catalytic domain, repeat 2, of plant alpha-type phospholipase D Back     alignment and domain information
>gnl|CDD|197294 cd09198, PLDc_pPLDbeta_1, Catalytic domain, repeat 1, of plant beta-type phospholipase D Back     alignment and domain information
>gnl|CDD|197239 cd09141, PLDc_vPLD1_2_yPLD_like_2, Catalytic domain, repeat 2, of vertebrate phospholipases, PLD1 and PLD2, yeast PLDs, and similar proteins Back     alignment and domain information
>gnl|CDD|197237 cd09139, PLDc_pPLD_like_1, Catalytic domain, repeat 1, of plant phospholipase D and similar proteins Back     alignment and domain information
>gnl|CDD|193000 pfam12357, PLD_C, Phospholipase D C terminal Back     alignment and domain information
>gnl|CDD|197204 cd09105, PLDc_vPLD1_2_like_2, Catalytic domain, repeat 2, of vertebrate phospholipases, PLD1 and PLD2, and similar proteins Back     alignment and domain information
>gnl|CDD|197293 cd09197, PLDc_pPLDalpha_1, Catalytic domain, repeat 1, of plant alpha-type phospholipase D Back     alignment and domain information
>gnl|CDD|197302 cd09844, PLDc_vPLD1_2, Catalytic domain, repeat 2, of vertebrate phospholipase D1 Back     alignment and domain information
>gnl|CDD|215467 PLN02866, PLN02866, phospholipase D Back     alignment and domain information
>gnl|CDD|197303 cd09845, PLDc_vPLD2_2, Catalytic domain, repeat 2, of vertebrate phospholipase D2 Back     alignment and domain information
>gnl|CDD|197241 cd09143, PLDc_vPLD1_2_like_bac_2, Catalytic domain, repeat 2, of uncharacterized bacterial proteins with similarity to vertebrate phospholipases, PLD1 and PLD2 Back     alignment and domain information
>gnl|CDD|215467 PLN02866, PLN02866, phospholipase D Back     alignment and domain information
>gnl|CDD|197203 cd09104, PLDc_vPLD1_2_like_1, Catalytic domain, repeat 1, of vertebrate phospholipases, PLD1 and PLD2, and similar proteins Back     alignment and domain information
>gnl|CDD|224419 COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|197236 cd09138, PLDc_vPLD1_2_yPLD_like_1, Catalytic domain, repeat 1, of vertebrate phospholipases, PLD1 and PLD2, yeast PLDs, and similar proteins Back     alignment and domain information
>gnl|CDD|197238 cd09140, PLDc_vPLD1_2_like_bac_1, Catalytic domain, repeat 1, of uncharacterized bacterial proteins with similarity to vertebrate phospholipases, PLD1 and PLD2 Back     alignment and domain information
>gnl|CDD|197546 smart00155, PLDc, Phospholipase D Back     alignment and domain information
>gnl|CDD|197226 cd09128, PLDc_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized phospholipase D-like proteins Back     alignment and domain information
>gnl|CDD|216022 pfam00614, PLDc, Phospholipase D Active site motif Back     alignment and domain information
>gnl|CDD|197200 cd00138, PLDc_SF, Catalytic domain of phospholipase D superfamily proteins Back     alignment and domain information
>gnl|CDD|197259 cd09162, PLDc_CLS_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized proteins similar to bacterial cardiolipin synthase Back     alignment and domain information
>gnl|CDD|197211 cd09112, PLDc_CLS_2, catalytic domain repeat 2 of bacterial cardiolipin synthase and similar proteins Back     alignment and domain information
>gnl|CDD|197209 cd09110, PLDc_CLS_1, Catalytic domain, repeat 1, of bacterial cardiolipin synthase and similar proteins Back     alignment and domain information
>gnl|CDD|221916 pfam13091, PLDc_2, PLD-like domain Back     alignment and domain information
>gnl|CDD|197300 cd09842, PLDc_vPLD1_1, Catalytic domain, repeat 1, of vertebrate phospholipase D1 Back     alignment and domain information
>gnl|CDD|197212 cd09113, PLDc_ymdC_like_2, Putative catalytic domain, repeat 2, of Escherichia coli uncharacterized protein ymdC and similar proteins Back     alignment and domain information
>gnl|CDD|197256 cd09159, PLDc_ybhO_like_2, Catalytic domain, repeat 2, of Escherichia coli cardiolipin synthase ybhO and similar proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 540
PLN03008868 Phospholipase D delta 100.0
PLN02270808 phospholipase D alpha 100.0
PLN02352758 phospholipase D epsilon 100.0
KOG1329887 consensus Phospholipase D1 [Lipid transport and me 100.0
PLN028661068 phospholipase D 100.0
PRK12452509 cardiolipin synthetase; Reviewed 100.0
PRK01642483 cls cardiolipin synthetase; Reviewed 100.0
PRK11263411 cardiolipin synthase 2; Provisional 100.0
COG1502438 Cls Phosphatidylserine/phosphatidylglycerophosphat 99.97
PHA02820424 phospholipase-D-like protein; Provisional 99.95
PRK09428451 pssA phosphatidylserine synthase; Provisional 99.94
PF1235774 PLD_C: Phospholipase D C terminal ; InterPro: IPR0 99.94
PHA03003369 palmytilated EEV membrane glycoprotein; Provisiona 99.92
PHA02820 424 phospholipase-D-like protein; Provisional 99.64
cd00138176 PLDc Phospholipase D. Active site motifs; The PLD 99.47
PRK13912177 nuclease NucT; Provisional 99.43
PRK05443691 polyphosphate kinase; Provisional 99.39
PF13091126 PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A 99.36
PHA03003 369 palmytilated EEV membrane glycoprotein; Provisiona 99.3
TIGR03705672 poly_P_kin polyphosphate kinase 1. Members of this 99.26
PRK11263 411 cardiolipin synthase 2; Provisional 99.22
PRK12452 509 cardiolipin synthetase; Reviewed 99.06
PRK01642 483 cls cardiolipin synthetase; Reviewed 99.06
PRK09428 451 pssA phosphatidylserine synthase; Provisional 99.04
PRK05443 691 polyphosphate kinase; Provisional 99.03
PF0061428 PLDc: Phospholipase D Active site motif; InterPro: 99.0
KOG3603 456 consensus Predicted phospholipase D [General funct 98.88
smart0015528 PLDc Phospholipase D. Active site motifs. Phosphat 98.68
PF0061428 PLDc: Phospholipase D Active site motif; InterPro: 98.44
COG1502 438 Cls Phosphatidylserine/phosphatidylglycerophosphat 98.13
TIGR03705672 poly_P_kin polyphosphate kinase 1. Members of this 98.12
KOG3603456 consensus Predicted phospholipase D [General funct 98.06
cd00138176 PLDc Phospholipase D. Active site motifs; The PLD 98.01
PLN02866 1068 phospholipase D 97.89
smart0015528 PLDc Phospholipase D. Active site motifs. Phosphat 97.56
PRK13912177 nuclease NucT; Provisional 97.38
PF13091126 PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A 97.15
PF07894284 DUF1669: Protein of unknown function (DUF1669); In 96.8
PF13918177 PLDc_3: PLD-like domain 95.52
PLN02352 758 phospholipase D epsilon 95.47
KOG3964469 consensus Phosphatidylglycerolphosphate synthase [ 94.87
PLN02270 808 phospholipase D alpha 94.05
PF13090352 PP_kinase_C: Polyphosphate kinase C-terminal domai 92.89
PF09565296 RE_NgoFVII: NgoFVII restriction endonuclease; Inte 92.0
KOG1329 887 consensus Phospholipase D1 [Lipid transport and me 91.07
PLN03008 868 Phospholipase D delta 85.83
COG0855 696 Ppk Polyphosphate kinase [Inorganic ion transport 85.81
>PLN03008 Phospholipase D delta Back     alignment and domain information 
Probab=100.00  E-value=2.2e-135  Score=1115.85  Aligned_cols=540  Identities=76%  Similarity=1.284  Sum_probs=492.3

Q ss_pred             CCCchHHHHhhccCCCcEEEEecCCCCCccchhhhc-----------cccccccCccceEEEcCCCCCCCCceEEEECcc
Q 009218            1 MATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQ-----------IVGTIFTHHQKCVLVDTQASGNNRKITAFIGGI   69 (540)
Q Consensus         1 ~~~~d~~~~~~~~~~~V~~~l~~~~~~~~~~~~~~~-----------~~~~~~~hHqK~vVID~~~~~~~~~~vAFvGGi   69 (540)
                      |+||||||++||++++|+|+||||+++.+++++++.           .++++|+||||+||||+++++++|++||||||+
T Consensus       318 m~thdeet~~~f~h~~v~~~l~pr~~~~~~~~~~~~~~~~~~iy~~~~~~~~~sHHQK~VVID~~~~~~~r~~vAFvGGi  397 (868)
T PLN03008        318 MGTHDEETRKFFKHSSVICVLSPRYASSKLGLFKQQASPIFSIYVMTVVGTLFTHHQKCVLVDTQAVGNNRKVTAFIGGL  397 (868)
T ss_pred             cccccHHHHHhhcCCCeeEEECCCccccccchhhccccccccccccccccccccccceEEEEccCCCCCccceEEEEcce
Confidence            899999999999999999999999999999999874           567899999999999998888899999999999


Q ss_pred             cCCCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeeEEEEEEeCHHHHHHHHHHHHHHHHhcccchhhhhhhc
Q 009218           70 DLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKR  149 (540)
Q Consensus        70 Dl~~~R~Dt~~H~l~~~~~~~~~~d~~n~~~~~~~~~pr~pWhDv~~~v~Gpaa~dl~~~F~qrWn~a~~~~~~~~~~~~  149 (540)
                      |||+|||||++|+++++++++|++||+||++.++.+.|++||||+||+|+||||++|+.+|.+||+++++..++..++++
T Consensus       398 DLc~gRwDT~~H~l~~~l~t~~~~D~~np~~~~~~~~p~~PWHDvh~rVeGPaV~dL~~~F~qRW~~aTg~~~~~~~~k~  477 (868)
T PLN03008        398 DLCDGRYDTPEHRILHDLDTVFKDDFHNPTFPAGTKAPRQPWHDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKG  477 (868)
T ss_pred             eccCCccCCcCCCccccccccccccccCccccCCCCCCCCCeEEEEEEEECHHHHHHHHHHHHHHHHhhCcccccccccc
Confidence            99999999999999999999999999999988777789999999999999999999999999999999986544445566


Q ss_pred             cccccchhhhhhcccccccCccccccCCCCccCCCCCcccccccCCCCCCeEEEEEeecCCCCCCCCCCCcchhhhhhhh
Q 009218          150 VSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLI  229 (540)
Q Consensus       150 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~vQvlRs~~~~~~~~~p~~~~~~~~~~l~  229 (540)
                      .+.|.++.|+++.++++++.|+....+.+....|...+.+...+.+++++|.||+|||+++|++++||..+++++.++|+
T Consensus       478 ~~~~~~d~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~w~vQifRSId~~sa~g~P~~~~~~~~~~l~  557 (868)
T PLN03008        478 KTHWQDDALIRIGRISWILSPVFKFLKDGTSIIPEDDPCVWVSKEDDPENWHVQIFRSIDSGSVKGFPKYEDEAEAQHLE  557 (868)
T ss_pred             ccccccchhcchhhcccccCCCccccccccccccCCCCccCccccCCCCccccceeeecCchhhcCCCCCcchhhhhccc
Confidence            66788899999999998887653221111111111111111111356789999999999999999999999999999999


Q ss_pred             ccccccchHHHHHHHHHHHHhhccEEEEEeeeeeccCCCCCccccCCCCCchHHHHHHHHHHHHhcCCCcEEEEEecCCC
Q 009218          230 CAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWP  309 (540)
Q Consensus       230 ~~~~~~~e~sI~~ayl~aI~~Ak~~IYIEnqYFi~~~~~~~~~~~~~~~n~i~~~la~~l~~a~~~~~gv~V~Ivlp~~p  309 (540)
                      ||+++.+|+||++||+++|++||||||||||||++++++|+++++.++.|+|+++|+++|+++++++++|+|+||+|++|
T Consensus       558 ~gk~~~ie~SIq~aYi~aIr~A~hFIYIENQYFiss~~~w~~~~~~~~~n~I~~eia~kI~~ki~~~e~f~V~IViP~~p  637 (868)
T PLN03008        558 CAKRLVVDKSIQTAYIQTIRSAQHFIYIENQYFLGSSYAWPSYRDAGADNLIPMELALKIVSKIRAKERFAVYVVIPLWP  637 (868)
T ss_pred             cccccchhhhHHHHHHHHHHhhccEEEEehhhhhccccccccccccccccchhHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCchhHHHHHHHHHHHHHhHHHHHHHHHHcCCccccCCccccccCCcccCCCcccccCCCCCccccccccccccee
Q 009218          310 EGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYV  389 (540)
Q Consensus       310 eg~~~~~~~~~il~~~~~t~~~~~~~i~~~L~~~Gv~~~p~~yl~~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv  389 (540)
                      ||+++++++|.||+||++||++||.+|.++|+++|.+.+|.+||+||||++++...+..++.+++.+..+++.++++|||
T Consensus       638 eG~~~sg~vq~Il~wq~~TM~~~~~~I~~~L~~~~~d~~p~dyl~fy~L~~~e~~~~~~~~~~~~~~~~a~~~rr~~IYv  717 (868)
T PLN03008        638 EGDPKSGPVQEILYWQSQTMQMMYDVIAKELKAVQSDAHPLDYLNFYCLGKREQLPDDMPATNGSVVSDSYNFQRFMIYV  717 (868)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccCEEEEecccccccccCCCCCCCCchhhhhhhccceeEEE
Confidence            99999999999999999999999999999999988777899999999999998875555566677777788888999999


Q ss_pred             eeEEEEEeCeEEEecCcccccccCCCCCCcceEEEEecCCcccccccCCCCccHHHHHHHHHHHhcCCCcccccCCCchH
Q 009218          390 HAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLD  469 (540)
Q Consensus       390 HSKlmIVDD~~~~IGSANin~RSm~g~~DsEi~v~i~d~~~~~~~~~~~~~~~~~~lR~~Lw~eHlG~~~~~~~~p~s~~  469 (540)
                      |||+|||||++++|||||||+|||.++||||+++.+++|.++|+++.+.++|+|++||++||+||||+.++.|.+|+|+|
T Consensus       718 HsK~~ivDd~~~~iGSaN~n~RS~~~~Rd~E~~~~~~~~~~~~~~~~~~~rg~I~g~R~sLwaEHLG~~~~~~~~p~s~e  797 (868)
T PLN03008        718 HAKGMIVDDEYVLMGSANINQRSMAGTKDTEIAMGAYQPNHTWAHKGRHPRGQVYGYRMSLWAEHLGKTGDEFVEPSDLE  797 (868)
T ss_pred             eeeEEEECCCEEEEeccccCHhhccCCCCceEeEEeccccccccccCcchhhHHHHHHHHHHHHHhCCCHHHccCCCCHH
Confidence            99999999999999999999999999999999999999999987667788999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhhhhhcccCCCCcceeeCccccCCCCCccCCCCCCCCCCCCCccccccCCCCCCCCCC
Q 009218          470 CIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLPDMLTT  540 (540)
Q Consensus       470 ~~~~~~~~a~~nw~~~~~~~~~~~~g~L~~~p~~~~~~~~~~~~~g~~~fp~~~~~~~~~~~~~~~~~~~~  540 (540)
                      |++++|++|++||++|+++++.+|+|||+.||+.|+.||++++|||+|+||||+|+|||++|.+||++|||
T Consensus       798 cv~~vn~~a~~~w~~y~~~~~~~~~ghl~~yp~~v~~~g~v~~l~g~~~fpd~~~~v~g~~~~~lp~~ltt  868 (868)
T PLN03008        798 CLKKVNTISEENWKRFIDPKFSELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIGAHSMALPDTLTT  868 (868)
T ss_pred             HHHHHHHHHHHHHHHhhccccccCCcccccCceEecCCCcEeeCCCCCcCCCCCCceeccccccCCccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999997

>PLN02270 phospholipase D alpha Back     alignment and domain information
>PLN02352 phospholipase D epsilon Back     alignment and domain information
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism] Back     alignment and domain information
>PLN02866 phospholipase D Back     alignment and domain information
>PRK12452 cardiolipin synthetase; Reviewed Back     alignment and domain information
>PRK01642 cls cardiolipin synthetase; Reviewed Back     alignment and domain information
>PRK11263 cardiolipin synthase 2; Provisional Back     alignment and domain information
>COG1502 Cls Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism] Back     alignment and domain information
>PHA02820 phospholipase-D-like protein; Provisional Back     alignment and domain information
>PRK09428 pssA phosphatidylserine synthase; Provisional Back     alignment and domain information
>PF12357 PLD_C: Phospholipase D C terminal ; InterPro: IPR024632 Phospholipase D (PLD) catalyses the hydrolysis of the phosphodiester bond of glycerophospholipids to generate phosphatidic acid and a free head group Back     alignment and domain information
>PHA03003 palmytilated EEV membrane glycoprotein; Provisional Back     alignment and domain information
>PHA02820 phospholipase-D-like protein; Provisional Back     alignment and domain information
>cd00138 PLDc Phospholipase D Back     alignment and domain information
>PRK13912 nuclease NucT; Provisional Back     alignment and domain information
>PRK05443 polyphosphate kinase; Provisional Back     alignment and domain information
>PF13091 PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A 1BYR_A 1V0T_A 1V0U_A 1V0V_A 1V0S_A 1V0R_A 1V0W_A Back     alignment and domain information
>PHA03003 palmytilated EEV membrane glycoprotein; Provisional Back     alignment and domain information
>TIGR03705 poly_P_kin polyphosphate kinase 1 Back     alignment and domain information
>PRK11263 cardiolipin synthase 2; Provisional Back     alignment and domain information
>PRK12452 cardiolipin synthetase; Reviewed Back     alignment and domain information
>PRK01642 cls cardiolipin synthetase; Reviewed Back     alignment and domain information
>PRK09428 pssA phosphatidylserine synthase; Provisional Back     alignment and domain information
>PRK05443 polyphosphate kinase; Provisional Back     alignment and domain information
>PF00614 PLDc: Phospholipase D Active site motif; InterPro: IPR001736 Phosphatidylcholine-hydrolysing phospholipase D (PLD) isoforms are activated by ADP-ribosylation factors (ARFs) Back     alignment and domain information
>KOG3603 consensus Predicted phospholipase D [General function prediction only] Back     alignment and domain information
>smart00155 PLDc Phospholipase D Back     alignment and domain information
>PF00614 PLDc: Phospholipase D Active site motif; InterPro: IPR001736 Phosphatidylcholine-hydrolysing phospholipase D (PLD) isoforms are activated by ADP-ribosylation factors (ARFs) Back     alignment and domain information
>COG1502 Cls Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism] Back     alignment and domain information
>TIGR03705 poly_P_kin polyphosphate kinase 1 Back     alignment and domain information
>KOG3603 consensus Predicted phospholipase D [General function prediction only] Back     alignment and domain information
>cd00138 PLDc Phospholipase D Back     alignment and domain information
>PLN02866 phospholipase D Back     alignment and domain information
>smart00155 PLDc Phospholipase D Back     alignment and domain information
>PRK13912 nuclease NucT; Provisional Back     alignment and domain information
>PF13091 PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A 1BYR_A 1V0T_A 1V0U_A 1V0V_A 1V0S_A 1V0R_A 1V0W_A Back     alignment and domain information
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function Back     alignment and domain information
>PF13918 PLDc_3: PLD-like domain Back     alignment and domain information
>PLN02352 phospholipase D epsilon Back     alignment and domain information
>KOG3964 consensus Phosphatidylglycerolphosphate synthase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02270 phospholipase D alpha Back     alignment and domain information
>PF13090 PP_kinase_C: Polyphosphate kinase C-terminal domain; PDB: 2O8R_A 1XDP_A 1XDO_B Back     alignment and domain information
>PF09565 RE_NgoFVII: NgoFVII restriction endonuclease; InterPro: IPR019065 There are four classes of restriction endonucleases: types I, II,III and IV Back     alignment and domain information
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism] Back     alignment and domain information
>PLN03008 Phospholipase D delta Back     alignment and domain information
>COG0855 Ppk Polyphosphate kinase [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query540
1v0w_A506 Phospholipase D; hydrolase, substrate SOAK, dibuty 2e-16
3hsi_A458 Phosphatidylserine synthase; CDP- diacylglycerol-- 2e-07
1byr_A155 Protein (endonuclease); phosphodiesterase,; 2.00A 5e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A* Length = 506 Back     alignment and structure
 Score = 80.9 bits (199), Expect = 2e-16
 Identities = 48/372 (12%), Positives = 101/372 (27%), Gaps = 76/372 (20%)

Query: 44  HHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIG 103
           +H K ++VD Q        +A  GGI+     Y    H                      
Sbjct: 166 NHSKILVVDGQ--------SALTGGINSWKDDYLDTTH---------------------- 195

Query: 104 TKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGR 163
                 P  D+   L GPAA       +  W    +           +      +  + +
Sbjct: 196 ------PVSDVDLALTGPAAGSAGRYLDTLWTWTCQNKSNIASVWFAASGNAGCMPTMHK 249

Query: 164 ISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDI 223
                +P+ S  T    ++      V +   D    +   +  + D        K +  +
Sbjct: 250 D---TNPKASPATGNVPVIAVGGLGVGIKDVDPKSTFRPDLPTASD-------TKCVVGL 299

Query: 224 DDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPM 283
            D +    +D       ++A    + SA+  I I  Q    ++   P  +         +
Sbjct: 300 HDNTNA-DRDYDTVNPEESALRALVASAKGHIEISQQDL--NATCPPLPRYDIR-----L 351

Query: 284 ELALKIASK--IRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELR 341
             AL       ++      V +++            V    + Q +++  +   +   L 
Sbjct: 352 YDALAAKMAAGVK------VRIVVSDPANRG----AVGSGGYSQIKSLSEISDTLRNRLA 401

Query: 342 EMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYV 401
            +                 +     ++         + +         H K + VD    
Sbjct: 402 NITGGQQ----------AAKTAMCSNLQLATFRSSPNGKWADGHPYAQHHKLVSVDSSTF 451

Query: 402 IMGSANINQRSM 413
            +GS N+    +
Sbjct: 452 YIGSKNLYPSWL 463
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae} Length = 458 Back     alignment and structure
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A Length = 155 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query540
1v0w_A506 Phospholipase D; hydrolase, substrate SOAK, dibuty 99.96
3hsi_A458 Phosphatidylserine synthase; CDP- diacylglycerol-- 99.91
1byr_A155 Protein (endonuclease); phosphodiesterase,; 2.00A 99.59
1xdp_A687 Polyphosphate kinase; PPK, PPK complex with AMPPNP 99.58
4ggj_A196 Mitochondrial cardiolipin hydrolase; piRNA pathway 99.57
2o8r_A705 Polyphosphate kinase; structural genomics, protein 99.44
4gel_A220 Mitochondrial cardiolipin hydrolase; piRNA, phosph 99.26
1xdp_A687 Polyphosphate kinase; PPK, PPK complex with AMPPNP 99.25
3hsi_A 458 Phosphatidylserine synthase; CDP- diacylglycerol-- 99.09
1v0w_A 506 Phospholipase D; hydrolase, substrate SOAK, dibuty 99.03
2o8r_A 705 Polyphosphate kinase; structural genomics, protein 98.53
1byr_A155 Protein (endonuclease); phosphodiesterase,; 2.00A 98.16
4ggj_A196 Mitochondrial cardiolipin hydrolase; piRNA pathway 98.14
4gel_A220 Mitochondrial cardiolipin hydrolase; piRNA, phosph 97.66
3qph_A342 TRMB, A global transcription regulator; transcript 96.2
2c1l_A 358 Restriction endonuclease; BFII, domain fusion, hyd 90.12
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A* Back     alignment and structure
Probab=99.96  E-value=1.2e-29  Score=276.90  Aligned_cols=291  Identities=18%  Similarity=0.150  Sum_probs=150.8

Q ss_pred             cccCccceEEEcCCCCCCCCceEEEECcccCCCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeeEEEEEEeC
Q 009218           41 IFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDG  120 (540)
Q Consensus        41 ~~~hHqK~vVID~~~~~~~~~~vAFvGGiDl~~~R~Dt~~H~l~~~~~~~~~~d~~n~~~~~~~~~pr~pWhDv~~~v~G  120 (540)
                      +.+||+|++|||++        +||+||+||++++|.+.                            ..+|||++++|+|
T Consensus       163 ~~r~H~K~~ViD~~--------~a~~Gg~Nl~~d~y~~~----------------------------~~~~~D~~v~i~G  206 (506)
T 1v0w_A          163 FSWNHSKILVVDGQ--------SALTGGINSWKDDYLDT----------------------------THPVSDVDLALTG  206 (506)
T ss_dssp             TBCBCCCEEEETTT--------EEEEESCCCCHHHHTSS----------------------------SSCCBEEEEEEES
T ss_pred             cccceeeEEEECCc--------EEEeeccccCccccccC----------------------------CCCceEEEEEEEC
Confidence            45999999999998        99999999987677531                            1489999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcccchhhhhhhccccccchhhhhhcccccccCccccccCCCCccCCCCCcccccccCCCCCCe
Q 009218          121 PAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENW  200 (540)
Q Consensus       121 paa~dl~~~F~qrWn~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~  200 (540)
                      |+|.++...|.++|+.......   .+..+  |....- ....++... ..         ..|..        ....+..
T Consensus       207 ~~v~~l~~~F~~~W~~~~~~~~---~~~~~--~~~~~~-~~~~~~~~~-~~---------~~p~~--------~~~~~~~  262 (506)
T 1v0w_A          207 PAAGSAGRYLDTLWTWTCQNKS---NIASV--WFAASG-NAGCMPTMH-KD---------TNPKA--------SPATGNV  262 (506)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT---STTTE--EEEEST-TCCCCTTHH-HH---------HSCSS--------CCCCSSE
T ss_pred             HHHHHHHHHHHHHHhhhccccC---Chhhh--cccccc-ccccCchhc-cc---------cCccc--------Ccccccc
Confidence            9999999999999997543210   00000  000000 000000000 00         00100        0011222


Q ss_pred             EEEEEeecCCCCCCCCCCCcch-----hhhhhhhccccc--------cchHHHHHHHHHHHHhhccEEEEEeeeeeccCC
Q 009218          201 HVQIFRSIDSGSVKGFPKSIED-----IDDQSLICAKDV--------VIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSY  267 (540)
Q Consensus       201 ~vQvlRs~~~~~~~~~p~~~~~-----~~~~~l~~~~~~--------~~e~sI~~ayl~aI~~Ak~~IYIEnqYFi~~~~  267 (540)
                      .+|+............|.....     +...-+++..+.        ..+.++..+|+++|.+||++|||++|||.+--.
T Consensus       263 ~~~~~~~~~~~i~~~~P~~~~~~~~w~~~~~~~~~d~P~~~~~~~~~~~~~~~~~~~~~~I~~A~~~I~I~tq~~~pyf~  342 (506)
T 1v0w_A          263 PVIAVGGLGVGIKDVDPKSTFRPDLPTASDTKCVVGLHDNTNADRDYDTVNPEESALRALVASAKGHIEISQQDLNATCP  342 (506)
T ss_dssp             EEEEEECCCSSSCSCCTTCCCCCCCCCCSSSCSSTTCCCTTTSCHHHHHHCHHHHHHHHHHHTCSSEEEEEESCSSCCTT
T ss_pred             cceecccccceeecCCccccccccCcccccceeeccccccccCcccccccccHHHHHHHHHhCcCcEEEEEecccccccc
Confidence            3333221100000001110000     000000111000        013579999999999999999999966653110


Q ss_pred             CCCccccCCCCCchHHHHHHHHHHHHhcCCCcEEEEEecCCCCCCCCCchhHHHHHHHH-HHHHHhHH---H--HHHHHH
Q 009218          268 AWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQS-QTMQMMYS---V--VAQELR  341 (540)
Q Consensus       268 ~~~~~~~~~~~n~i~~~la~~l~~a~~~~~gv~V~Ivlp~~peg~~~~~~~~~il~~~~-~t~~~~~~---~--i~~~L~  341 (540)
                        |..       .....+..+|.+|++  +||+|+||+|..+....        +.+.. ..+..+.+   .  -...|.
T Consensus       343 --p~~-------~~~~~i~~aL~~Aa~--rGV~VrIl~~~~~~~~~--------~~~a~~~~~~~L~~~~~~l~~gv~ll  403 (506)
T 1v0w_A          343 --PLP-------RYDIRLYDALAAKMA--AGVKVRIVVSDPANRGA--------VGSGGYSQIKSLSEISDTLRNRLANI  403 (506)
T ss_dssp             --TSC-------SCCHHHHHHHHHHHH--TTCEEEEEECCGGGCC--------------CCCCSCTHHHHHHHHHHHHHH
T ss_pred             --Ccc-------cchHHHHHHHHHHHh--CCCcEEEEeCCCCchHH--------HHHhHHHHHHHHHHhhhhhcccchhc
Confidence              100       001467788887765  78999999997652111        00100 00000000   0  011222


Q ss_pred             HcCCc-cc--cCCccccccCCcccCCCcccccCCCCCccccccc-ccccceeeeEEEEEeCeEEEecCcccccccCCCCC
Q 009218          342 EMQVD-AH--PQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKN-QRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSK  417 (540)
Q Consensus       342 ~~Gv~-~~--p~~yl~~y~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iyvHSKlmIVDD~~~~IGSANin~RSm~g~~  417 (540)
                      ++|+- ..  ....+.+|.++.....                .+ .....++|+|+|||||++++|||+|||.||+    
T Consensus       404 ~~g~~e~~~~~~~~l~i~~~~~~~~~----------------~~~~~~~~~lHaK~~vvD~~~~~vGS~N~d~rS~----  463 (506)
T 1v0w_A          404 TGGQQAAKTAMCSNLQLATFRSSPNG----------------KWADGHPYAQHHKLVSVDSSTFYIGSKNLYPSWL----  463 (506)
T ss_dssp             HTSHHHHHHHHHHHEEEEECCSSSSS----------------SCTTSCCCCBCCEEEEETTTEEEEESCCSSCCCS----
T ss_pred             ccccchhccccccceeeeeccccCcc----------------ccccCccccceEEEEEECCcEEEEeCCCCCCcch----
Confidence            33320 00  0000122222110000                00 0125799999999999999999999999999    


Q ss_pred             CcceEEEEecCCcc
Q 009218          418 DTEIAMGSYQPHHT  431 (540)
Q Consensus       418 DsEi~v~i~d~~~~  431 (540)
                       +|++++|++++++
T Consensus       464 -~E~~l~i~~~~~a  476 (506)
T 1v0w_A          464 -QDFGYIVESPEAA  476 (506)
T ss_dssp             -BCEEEEEECHHHH
T ss_pred             -hhceeEecCHHHH
Confidence             4999999987543
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae} Back     alignment and structure
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A Back     alignment and structure
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A* Back     alignment and structure
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A Back     alignment and structure
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 Back     alignment and structure
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A Back     alignment and structure
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A* Back     alignment and structure
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae} Back     alignment and structure
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A* Back     alignment and structure
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 Back     alignment and structure
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A Back     alignment and structure
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A Back     alignment and structure
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A Back     alignment and structure
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus} Back     alignment and structure
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 540
d1v0wa2246 d.136.1.2 (A:264-514) Phospholipase D {Streptomyce 8e-11
d1v0wa1258 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces 7e-09
d1v0wa1258 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces 1e-05
>d1v0wa2 d.136.1.2 (A:264-514) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Length = 246 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Phospholipase D/nuclease
superfamily: Phospholipase D/nuclease
family: Phospholipase D
domain: Phospholipase D
species: Streptomyces sp. [TaxId: 1931]

 Score = 60.2 bits (145), Expect = 8e-11
 Identities = 22/175 (12%), Positives = 47/175 (26%), Gaps = 25/175 (14%)

Query: 240 IQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERF 299
            ++A    + SA+  I I  Q    +    P Y     D L             +     
Sbjct: 55  EESALRALVASAKGHIEISQQDLNATCPPLPRYDIRLYDALAA-----------KMAAGV 103

Query: 300 AVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLG 359
            V +++            V    + Q +++  +       LR    +       +   + 
Sbjct: 104 KVRIVVSDPAN----RGAVGSGGYSQIKSLSEIS----DTLRNRLANITGGQQAAKTAMC 155

Query: 360 KREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMA 414
                 +     +      +  +       H K + VD     +GS N+    + 
Sbjct: 156 SN---LQLATFRSSPNGKWADGHPYAQ---HHKLVSVDSSTFYIGSKNLYPSWLQ 204
>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Length = 258 Back     information, alignment and structure
>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Length = 258 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query540
d1v0wa2246 Phospholipase D {Streptomyces sp. [TaxId: 1931]} 99.66
d1v0wa1258 Phospholipase D {Streptomyces sp. [TaxId: 1931]} 99.62
d1byra_152 Nuclease Nuc {Salmonella typhimurium [TaxId: 90371 99.49
d1v0wa1258 Phospholipase D {Streptomyces sp. [TaxId: 1931]} 99.47
d1v0wa2246 Phospholipase D {Streptomyces sp. [TaxId: 1931]} 98.0
d1byra_152 Nuclease Nuc {Salmonella typhimurium [TaxId: 90371 97.71
d2o8ra3188 Polyphosphate kinase, PPK {Porphyromonas gingivali 96.26
d1xdpa3187 Polyphosphate kinase, PPK {Escherichia coli [TaxId 95.95
d1xdpa4187 Polyphosphate kinase, PPK {Escherichia coli [TaxId 92.62
d2o8ra4186 Polyphosphate kinase, PPK {Porphyromonas gingivali 90.69
>d1v0wa2 d.136.1.2 (A:264-514) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Phospholipase D/nuclease
superfamily: Phospholipase D/nuclease
family: Phospholipase D
domain: Phospholipase D
species: Streptomyces sp. [TaxId: 1931]

Probab=99.66  E-value=3.4e-16  Score=152.73  Aligned_cols=157  Identities=13%  Similarity=0.094  Sum_probs=89.3

Q ss_pred             HHHHHHHHHHHhhccEEEEEeeeeeccCCCCCccccCCCCCchHHHHHHHHHHHHhcCCCcEEEEEecCCCCCCC----C
Q 009218          239 SIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDP----K  314 (540)
Q Consensus       239 sI~~ayl~aI~~Ak~~IYIEnqYFi~~~~~~~~~~~~~~~n~i~~~la~~l~~a~~~~~gv~V~Ivlp~~peg~~----~  314 (540)
                      ....+++.+|++|+++|||++|||......   .      +.....++.+|+++++  +||+|+||++.......    .
T Consensus        54 ~~e~a~~~lI~~A~~~I~I~~q~~~~~~~p---~------~~~~~~l~~AL~~aa~--RGV~Vrvll~~~~~~~~~~~~~  122 (246)
T d1v0wa2          54 PEESALRALVASAKGHIEISQQDLNATCPP---L------PRYDIRLYDALAAKMA--AGVKVRIVVSDPANRGAVGSGG  122 (246)
T ss_dssp             HHHHHHHHHHHTCSSEEEEEESCSSCCTTT---S------CSCCHHHHHHHHHHHH--TTCEEEEEECCGGGCC------
T ss_pred             hHHHHHHHHHHhcCcEEEEEEEeecccCCc---c------ccccHHHHHHHHHHHH--cCCcEEEEEecCCcccccccch
Confidence            356789999999999999999999875321   0      1112568888888875  78999999986421100    0


Q ss_pred             CchhHHHHHHHHHHHHHhHHH--HHHHHHHcCCccccCCccccccCCcccCCCcccccCCCCCcccccccccccceeeeE
Q 009218          315 TNTVQEILFWQSQTMQMMYSV--VAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAK  392 (540)
Q Consensus       315 ~~~~~~il~~~~~t~~~~~~~--i~~~L~~~Gv~~~p~~yl~~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyvHSK  392 (540)
                      ....+.++....+........  ....+... +    .+.+.++.++.....               .......+++|+|
T Consensus       123 ~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~---------------~~~~~~~~~lH~K  182 (246)
T d1v0wa2         123 YSQIKSLSEISDTLRNRLANITGGQQAAKTA-M----CSNLQLATFRSSPNG---------------KWADGHPYAQHHK  182 (246)
T ss_dssp             CCCCSCTHHHHHHHHHHHHHHHTSHHHHHHH-H----HHHEEEEECCSSSSS---------------SCTTSCCCCBCCE
T ss_pred             HHHHHHHHHhcchhhhccccccchhhhhccc-c----ccccceeeeecccCc---------------cccCCccccccee
Confidence            000011111111100000000  00000000 0    001112222111100               0011236899999


Q ss_pred             EEEEeCeEEEecCcccccccCCCCCCcceEEEEecCCcc
Q 009218          393 GMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHT  431 (540)
Q Consensus       393 lmIVDD~~~~IGSANin~RSm~g~~DsEi~v~i~d~~~~  431 (540)
                      +|||||++++|||+||+.||+     +|++++|++|+..
T Consensus       183 ~~VVD~~~~~VGS~Nl~p~~~-----~E~g~vi~~p~~a  216 (246)
T d1v0wa2         183 LVSVDSSTFYIGSKNLYPSWL-----QDFGYIVESPEAA  216 (246)
T ss_dssp             EEEETTTEEEEESCCSSCCCS-----BCEEEEEECHHHH
T ss_pred             EEEEcCCEEEEcCCcCCcchh-----ccCcEEEeCHHHH
Confidence            999999999999999999985     7999999998653
>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1byra_ d.136.1.1 (A:) Nuclease Nuc {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1v0wa2 d.136.1.2 (A:264-514) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1byra_ d.136.1.1 (A:) Nuclease Nuc {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2o8ra3 d.136.1.4 (A:318-505) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]} Back     information, alignment and structure
>d1xdpa3 d.136.1.4 (A:315-501) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xdpa4 d.136.1.4 (A:502-688) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2o8ra4 d.136.1.4 (A:506-691) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]} Back     information, alignment and structure