Citrus Sinensis ID: 009246

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------54
MAGKGEGPAIGIDLGTTYSCVGVWTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMPWKTMPTI
ccccccccEEEEEccccccEEEEEEcccEEEEccccccccHHHHHHccccccccEEEcccccccccccHHHHcccccccEEEEEccccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccHHHHHHHHHHHHcccEEEEEccHHHHHHHHHcccccccccccEEEEEEEccccccEEEEEEEEccEEEEEEcccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccccccEEEEEcccccccccccccccccccccccccccccEEEEEcccccccEEEEEEEcccccccccccccccEEcccccccccccccEEEEEEEccccEEEEEEEEccccccccEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
cccccccccEEEEEcccEEEEEEEcEEccEEEccccEEEcHHHHccccccHHHEEccHHHccccccccHHHHHHHHHcccEEEEEEccEEEEEEEEccEEEEEcHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHcccEEEEEEEHHHHHHHHcccccccccccEEEEEEEEEccccEEEEEEEEEccEccEEEEEEEccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEccEEEEEEEEHHHHHHHHHHHHHHcHHHHHHHHHHccccHHHccEEEEEcHHHHcHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccHHHHHcccccEccccEEEEEcccEEEEEEccccEccEEEEEEEEEccccccEEEEEEEEccccEHHHcEEEEEEEEEcccccccccccEEEEEEEcccccEEEEEEEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
magkgegpaigidlgttyscvgvwttpsyvgftdterligdaaknqvamnptntvfdakrligrrfsdasvqgdmklwpfkviagpadkpmigvnykgeekQFAAEEISSMVLIKMREIAEAYLGSTiknavvtvpayfndsqrqatKDAGVIAGLNVMRIINEPTAAAIAYGLdkkatsvgekNVLIFDLgggtfdvsLLTIEEGIFEVkatagdthlggedfdnRMVNHFVQEFKRknkkdisgnpRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNgkelckninpdeAVAYGAAVQAAILSGEGNEKVQDLLLldvtplslgletaggvmtvliprnttiptkkeqvfstysdnqpgvliqvyegertrtrdnnllgkfelsgippaprgvpqitvcfdidangilnvsaedkttakrtrsqspttrvdCQRMKLrrwfkrprstrlkmrstrrrsrprmpwktmpti
magkgegpaigIDLGTTYSCVGVWTTPSYVGFTDTERLIGDaaknqvamnptntvfdakrlIGRRFsdasvqgdmklWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQefkrknkkdisgnpralRRLRTACERakrtlsstaqttieidslyegiDFYSTITRARFEELNMDLFRKCMEPVEKCLrdakmdksTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEqvfstysdnqpgvLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGIlnvsaedkttakrtrsqspttrvdcqrmklrrwfkrprstrlkmrstrrrsrprmpwktmpti
MAGKGEGPAIGIDLGTTYSCVGVWTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEavaygaavqaaILSGEGNEKVQDlllldvtplslglETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPrstrlkmrstrrrsrprmpWKTMPTI
********AIGIDLGTTYSCVGVWTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEF*******************************TAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNV************************************************************
******G***GIDLGTTYSCVGVWTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDK***********TTRVDCQRMKLRRWFKRPR******************WKTMPT*
MAGKGEGPAIGIDLGTTYSCVGVWTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAED*****************CQRMKLRRWFKRPRS************************
******GPAIGIDLGTTYSCVGVWTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMP*******
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iiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAGKGEGPAIGIDLGTTYSCVGVWTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMPWKTMPTI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query539 2.2.26 [Sep-21-2011]
P27322644 Heat shock cognate 70 kDa N/A no 0.910 0.762 0.928 0.0
P09189651 Heat shock cognate 70 kDa N/A no 0.910 0.754 0.924 0.0
P22953651 Probable mediator of RNA yes no 0.910 0.754 0.920 0.0
Q9LHA8650 Probable mediator of RNA no no 0.910 0.755 0.905 0.0
P22954653 Probable mediator of RNA no no 0.910 0.751 0.899 0.0
O65719649 Heat shock 70 kDa protein no no 0.910 0.756 0.897 0.0
P29357653 Chloroplast envelope memb N/A no 0.910 0.751 0.903 0.0
P24629650 Heat shock cognate 70 kDa N/A no 0.910 0.755 0.903 0.0
Q9C7X7617 Heat shock 70 kDa protein no no 0.910 0.795 0.877 0.0
P26413645 Heat shock 70 kDa protein no no 0.909 0.759 0.867 0.0
>sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1 Back     alignment and function desciption
 Score =  968 bits (2502), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/506 (92%), Positives = 482/506 (95%), Gaps = 15/506 (2%)

Query: 1   MAGKGEGPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKN 45
           MAGKGEGPAIGIDLGTTYSCVGVW               TTPSYVGFTD+ERLIGDAAKN
Sbjct: 1   MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKN 60

Query: 46  QVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAA 105
           QVAMNP NTVFDAKRLIGRRFSDASVQ DMKLWPFKVI GP DKPMI VNYKGEEKQF+A
Sbjct: 61  QVAMNPINTVFDAKRLIGRRFSDASVQSDMKLWPFKVIPGPGDKPMIVVNYKGEEKQFSA 120

Query: 106 EEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP 165
           EEISSMVLIKM+EIAEA+LG+T+KNAVVTVPAY NDSQRQATKDAGVI+GLNVMRIINEP
Sbjct: 121 EEISSMVLIKMKEIAEAFLGTTVKNAVVTVPAYSNDSQRQATKDAGVISGLNVMRIINEP 180

Query: 166 TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 225
           TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
Sbjct: 181 TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 240

Query: 226 NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY 285
           NRMVNHFVQEFKRKNKKDI+GNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
Sbjct: 241 NRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY 300

Query: 286 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 345
           STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF
Sbjct: 301 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 360

Query: 346 NGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI 405
           NGKELCK+INPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
Sbjct: 361 NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI 420

Query: 406 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 465
           PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
Sbjct: 421 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 480

Query: 466 TVCFDIDANGILNVSAEDKTTAKRTR 491
           TVCFDIDANG LNVSAEDKTT ++ +
Sbjct: 481 TVCFDIDANGTLNVSAEDKTTGQKNK 506

Solanum lycopersicum (taxid: 4081)
>sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1 Back     alignment and function description
>sp|P22953|MD37E_ARATH Probable mediator of RNA polymerase II transcription subunit 37e OS=Arabidopsis thaliana GN=MED37E PE=1 SV=3 Back     alignment and function description
>sp|Q9LHA8|MD37C_ARATH Probable mediator of RNA polymerase II transcription subunit 37c OS=Arabidopsis thaliana GN=MED37C PE=1 SV=1 Back     alignment and function description
>sp|P22954|MD37D_ARATH Probable mediator of RNA polymerase II transcription subunit 37c OS=Arabidopsis thaliana GN=MED37D PE=1 SV=2 Back     alignment and function description
>sp|O65719|HSP7C_ARATH Heat shock 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSP70-3 PE=1 SV=1 Back     alignment and function description
>sp|P29357|HSP7E_SPIOL Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3 Back     alignment and function description
>sp|P24629|HSP71_SOLLC Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1 Back     alignment and function description
>sp|Q9C7X7|HSP7N_ARATH Heat shock 70 kDa protein 18 OS=Arabidopsis thaliana GN=HSP70-18 PE=1 SV=1 Back     alignment and function description
>sp|P26413|HSP70_SOYBN Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query539
255583059 652 heat shock protein, putative [Ricinus co 0.910 0.753 0.942 0.0
115486793 649 Os11g0703900 [Oryza sativa Japonica Grou 0.910 0.756 0.938 0.0
211906496 648 heat shock protein 70 [Gossypium hirsutu 0.910 0.757 0.936 0.0
108864707615 Heat shock cognate 70 kDa protein, putat 0.910 0.798 0.938 0.0
211906494 647 heat shock protein 70 [Gossypium hirsutu 0.910 0.758 0.940 0.0
392465167 649 Heat shock protein 70 [Nicotiana tabacum 0.910 0.756 0.934 0.0
356539018 649 PREDICTED: heat shock cognate 70 kDa pro 0.910 0.756 0.934 0.0
255573627 647 heat shock protein, putative [Ricinus co 0.910 0.758 0.934 0.0
224100969 648 predicted protein [Populus trichocarpa] 0.910 0.757 0.932 0.0
26985219 647 non-cell-autonomous heat shock cognate p 0.910 0.758 0.932 0.0
>gi|255583059|ref|XP_002532297.1| heat shock protein, putative [Ricinus communis] gi|223527999|gb|EEF30081.1| heat shock protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  976 bits (2523), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/506 (94%), Positives = 483/506 (95%), Gaps = 15/506 (2%)

Query: 1   MAGKGEGPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKN 45
           MAGKGEGPAIGIDLGTTYSCVGVW               TTPSYVGFTDTERLIGDAAKN
Sbjct: 1   MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKN 60

Query: 46  QVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAA 105
           QVAMNP NTVFDAKRLIGRRFSDASVQ D+KLWPFKVI GP DKPMI VNYKGEEKQFAA
Sbjct: 61  QVAMNPINTVFDAKRLIGRRFSDASVQSDIKLWPFKVIPGPGDKPMIVVNYKGEEKQFAA 120

Query: 106 EEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP 165
           EEISSMVLIKMREIAEAYLG+TIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
Sbjct: 121 EEISSMVLIKMREIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP 180

Query: 166 TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 225
           TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
Sbjct: 181 TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 240

Query: 226 NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY 285
           NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
Sbjct: 241 NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY 300

Query: 286 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 345
           STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHD VLVGGSTRIPKVQQLLQDFF
Sbjct: 301 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDAVLVGGSTRIPKVQQLLQDFF 360

Query: 346 NGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI 405
           NGKELCK+INPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
Sbjct: 361 NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI 420

Query: 406 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 465
           PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
Sbjct: 421 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 480

Query: 466 TVCFDIDANGILNVSAEDKTTAKRTR 491
           TVCFDIDANGILNVSAEDKTT ++ +
Sbjct: 481 TVCFDIDANGILNVSAEDKTTGQKNK 506

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|115486793|ref|NP_001068540.1| Os11g0703900 [Oryza sativa Japonica Group] gi|62733235|gb|AAX95352.1| dnaK-type molecular chaperone hsp70 - rice (fragment) [Oryza sativa Japonica Group] gi|77552703|gb|ABA95500.1| Heat shock cognate 70 kDa protein, putative, expressed [Oryza sativa Japonica Group] gi|113645762|dbj|BAF28903.1| Os11g0703900 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|211906496|gb|ACJ11741.1| heat shock protein 70 [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|108864707|gb|ABA95501.2| Heat shock cognate 70 kDa protein, putative, expressed [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|211906494|gb|ACJ11740.1| heat shock protein 70 [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|392465167|dbj|BAM24707.1| Heat shock protein 70 [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|356539018|ref|XP_003537997.1| PREDICTED: heat shock cognate 70 kDa protein-like [Glycine max] Back     alignment and taxonomy information
>gi|255573627|ref|XP_002527736.1| heat shock protein, putative [Ricinus communis] gi|223532877|gb|EEF34649.1| heat shock protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224100969|ref|XP_002312089.1| predicted protein [Populus trichocarpa] gi|222851909|gb|EEE89456.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|26985219|gb|AAN86274.1| non-cell-autonomous heat shock cognate protein 70 [Cucurbita maxima] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query539
TAIR|locus:2181833651 HSC70-1 "heat shock cognate pr 0.910 0.754 0.875 1.1e-231
TAIR|locus:2101222650 HSP70 "heat shock protein 70" 0.910 0.755 0.857 1.3e-228
TAIR|locus:2074984649 AT3G09440 [Arabidopsis thalian 0.910 0.756 0.849 5.6e-226
TAIR|locus:2181818653 Hsp70-2 [Arabidopsis thaliana 0.910 0.751 0.851 5.6e-226
TAIR|locus:2010713617 ERD2 "EARLY-RESPONSIVE TO DEHY 0.910 0.795 0.832 3.4e-219
TAIR|locus:2200462646 Hsp70b "heat shock protein 70B 0.909 0.758 0.790 2.4e-211
UNIPROTKB|P19120650 HSPA8 "Heat shock cognate 71 k 0.920 0.763 0.730 3.5e-194
UNIPROTKB|E2R0T6646 HSPA8 "Uncharacterized protein 0.920 0.767 0.730 3.5e-194
UNIPROTKB|P11142646 HSPA8 "Heat shock cognate 71 k 0.920 0.767 0.730 3.5e-194
UNIPROTKB|A2Q0Z1646 HSPA8 "Heat shock cognate 71 k 0.920 0.767 0.730 3.5e-194
TAIR|locus:2181833 HSC70-1 "heat shock cognate protein 70-1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2235 (791.8 bits), Expect = 1.1e-231, P = 1.1e-231
 Identities = 443/506 (87%), Positives = 456/506 (90%)

Query:     1 MAGKGEGPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKN 45
             M+GKGEGPAIGIDLGTTYSCVGVW               TTPSYV FTD+ERLIGDAAKN
Sbjct:     1 MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 60

Query:    46 QVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAA 105
             QVAMNP NTVFDAKRLIGRRFSD+SVQ DMKLWPFK+ AGPADKPMI V YKGEEK+FAA
Sbjct:    61 QVAMNPVNTVFDAKRLIGRRFSDSSVQSDMKLWPFKIQAGPADKPMIYVEYKGEEKEFAA 120

Query:   106 EEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP 165
             EEISSMVLIKMREIAEAYLG TIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
Sbjct:   121 EEISSMVLIKMREIAEAYLGVTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP 180

Query:   166 TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 225
             TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
Sbjct:   181 TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 240

Query:   226 NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY 285
             NRMVNHFVQEFKRK+KKDI+GNPRALRRLRT+CERAKRTLSSTAQTTIEIDSLYEGIDFY
Sbjct:   241 NRMVNHFVQEFKRKSKKDITGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFY 300

Query:   286 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 345
             STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF
Sbjct:   301 STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF 360

Query:   346 NGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLI 405
             NGKELCK+INPDE           ILSGEGNEKVQD             ETAGGVMT LI
Sbjct:   361 NGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLI 420

Query:   406 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 465
             PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI
Sbjct:   421 PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI 480

Query:   466 TVCFDIDANGILNVSAEDKTTAKRTR 491
             TVCFDIDANGILNVSAEDKTT ++ +
Sbjct:   481 TVCFDIDANGILNVSAEDKTTGQKNK 506
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM;IDA
GO:0005829 "cytosol" evidence=IDA;RCA;TAS
GO:0006457 "protein folding" evidence=TAS
GO:0009408 "response to heat" evidence=IEP;IMP
GO:0005634 "nucleus" evidence=IDA
GO:0009409 "response to cold" evidence=IEP
GO:0009507 "chloroplast" evidence=IDA
GO:0005730 "nucleolus" evidence=IDA
GO:0009615 "response to virus" evidence=IEP
GO:0022626 "cytosolic ribosome" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP;RCA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0042742 "defense response to bacterium" evidence=IMP
GO:0050832 "defense response to fungus" evidence=IMP
GO:0048046 "apoplast" evidence=IDA
GO:0002020 "protease binding" evidence=IPI
GO:0009506 "plasmodesma" evidence=IDA
GO:0010187 "negative regulation of seed germination" evidence=IMP
GO:0090332 "stomatal closure" evidence=IMP
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0006096 "glycolysis" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
TAIR|locus:2101222 HSP70 "heat shock protein 70" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074984 AT3G09440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2181818 Hsp70-2 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010713 ERD2 "EARLY-RESPONSIVE TO DEHYDRATION 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200462 Hsp70b "heat shock protein 70B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P19120 HSPA8 "Heat shock cognate 71 kDa protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2R0T6 HSPA8 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P11142 HSPA8 "Heat shock cognate 71 kDa protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|A2Q0Z1 HSPA8 "Heat shock cognate 71 kDa protein" [Equus caballus (taxid:9796)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9I8F9HSP71_ORYLANo assigned EC number0.76550.91460.7715N/Ano
P24629HSP71_SOLLCNo assigned EC number0.90350.91090.7553N/Ano
O73885HSP7C_CHICKNo assigned EC number0.76680.92020.7678yesno
Q71U34HSP7C_SAGOENo assigned EC number0.77450.92020.7678N/Ano
Q9LHA8MD37C_ARATHNo assigned EC number0.90510.91090.7553nono
P47773HSP7C_ICTPUNo assigned EC number0.74950.92020.7642N/Ano
Q9U639HSP7D_MANSENo assigned EC number0.78080.89790.7423N/Ano
Q01877HSP71_PUCGRNo assigned EC number0.78310.89050.7407N/Ano
P63018HSP7C_RATNo assigned EC number0.77450.92020.7678yesno
P63017HSP7C_MOUSENo assigned EC number0.77450.92020.7678yesno
P29357HSP7E_SPIOLNo assigned EC number0.90310.91090.7519N/Ano
P25840HSP70_CHLRENo assigned EC number0.82300.90160.7476N/Ano
Q91233HSP70_ONCTSNo assigned EC number0.75960.92200.7717N/Ano
P19378HSP7C_CRIGRNo assigned EC number0.77260.92020.7678yesno
P18694HSP72_USTMANo assigned EC number0.77690.90900.7596N/Ano
P22953MD37E_ARATHNo assigned EC number0.92090.91090.7542yesno
P27322HSP72_SOLLCNo assigned EC number0.92880.91090.7624N/Ano
P09446HSP7A_CAEELNo assigned EC number0.76930.91650.7718yesno
P36415HS7C1_DICDINo assigned EC number0.78910.89230.7515yesno
Q90473HSP7C_DANRENo assigned EC number0.75330.92020.7642yesno
P26791HSP70_DAUCANo assigned EC number0.81010.90530.7450N/Ano
P08108HSP70_ONCMYNo assigned EC number0.76870.92020.7619N/Ano
P09189HSP7C_PETHYNo assigned EC number0.92490.91090.7542N/Ano
Q5NVM9HSP7C_PONABNo assigned EC number0.77450.92020.7678yesno
A2Q0Z1HSP7C_HORSENo assigned EC number0.77450.92020.7678yesno
P27541HSP70_BRUMANo assigned EC number0.77910.89050.7453N/Ano
P11147HSP7D_DROMENo assigned EC number0.75330.92020.7619yesno
P11143HSP70_MAIZENo assigned EC number0.89080.90160.7534N/Ano
P11142HSP7C_HUMANNo assigned EC number0.77450.92020.7678yesno
P37899HSP70_PYRSANo assigned EC number0.77900.90900.7550N/Ano
P19120HSP7C_BOVINNo assigned EC number0.77450.92020.7630yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query539
PTZ00009653 PTZ00009, PTZ00009, heat shock 70 kDa protein; Pro 0.0
pfam00012598 pfam00012, HSP70, Hsp70 protein 0.0
cd10233376 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding 0.0
PRK00290627 PRK00290, dnaK, molecular chaperone DnaK; Provisio 0.0
cd10241374 cd10241, HSPA5-like_NBD, Nucleotide-binding domain 0.0
TIGR02350595 TIGR02350, prok_dnaK, chaperone protein DnaK 0.0
COG0443579 COG0443, DnaK, Molecular chaperone [Posttranslatio 0.0
CHL00094621 CHL00094, dnaK, heat shock protein 70 0.0
PTZ00400663 PTZ00400, PTZ00400, DnaK-type molecular chaperone; 0.0
PRK13411 653 PRK13411, PRK13411, molecular chaperone DnaK; Prov 0.0
PRK13410 668 PRK13410, PRK13410, molecular chaperone DnaK; Prov 0.0
PLN03184673 PLN03184, PLN03184, chloroplast Hsp70; Provisional 0.0
cd10170369 cd10170, HSP70_NBD, Nucleotide-binding domain of t 1e-174
PTZ00186657 PTZ00186, PTZ00186, heat shock 70 kDa precursor pr 1e-168
cd10234376 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding d 1e-166
PRK05183616 PRK05183, hscA, chaperone protein HscA; Provisiona 1e-165
TIGR01991599 TIGR01991, HscA, Fe-S protein assembly chaperone H 1e-161
cd11733377 cd11733, HSPA9-like_NBD, Nucleotide-binding domain 1e-158
cd11734373 cd11734, Ssq1_like_NBD, Nucleotide-binding domain 1e-143
cd10228381 cd10228, HSPA4_like_NDB, Nucleotide-binding domain 1e-138
cd10235339 cd10235, HscC_like_NBD, Nucleotide-binding domain 1e-122
cd10238375 cd10238, HSPA14-like_NBD, Nucleotide-binding domai 1e-115
cd10236355 cd10236, HscA_like_NBD, Nucleotide-binding domain 1e-114
cd10237417 cd10237, HSPA13-like_NBD, Nucleotide-binding domai 1e-108
cd10230388 cd10230, HYOU1-like_NBD, Nucleotide-binding domain 1e-103
PRK01433595 PRK01433, hscA, chaperone protein HscA; Provisiona 1e-94
cd10232386 cd10232, ScSsz1p_like_NBD, Nucleotide-binding doma 4e-85
cd11737383 cd11737, HSPA4_NBD, Nucleotide-binding domain of H 3e-84
cd11732377 cd11732, HSP105-110_like_NBD, Nucleotide-binding d 7e-83
cd11739383 cd11739, HSPH1_NBD, Nucleotide-binding domain of H 4e-81
cd11738383 cd11738, HSPA4L_NBD, Nucleotide-binding domain of 7e-75
cd10231415 cd10231, YegD_like, Escherichia coli YegD, a putat 7e-26
cd10229404 cd10229, HSPA12_like_NBD, Nucleotide-binding domai 3e-19
cd10225320 cd10225, MreB_like, MreB and similar proteins 1e-11
PRK11678450 PRK11678, PRK11678, putative chaperone; Provisiona 8e-07
TIGR01312481 TIGR01312, XylB, D-xylulose kinase 3e-06
pfam06723327 pfam06723, MreB_Mbl, MreB/Mbl protein 3e-06
cd10227312 cd10227, ParM_like, Plasmid segregation protein Pa 4e-06
cd00012185 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide- 4e-06
PRK13930335 PRK13930, PRK13930, rod shape-determining protein 7e-06
TIGR02529239 TIGR02529, EutJ, ethanolamine utilization protein 8e-06
TIGR00904333 TIGR00904, mreB, cell shape determining protein, M 8e-06
PRK13928336 PRK13928, PRK13928, rod shape-determining protein 2e-05
COG4820277 COG4820, EutJ, Ethanolamine utilization protein, p 5e-05
cd07809487 cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 3e-04
PRK13929335 PRK13929, PRK13929, rod-share determining protein 4e-04
PRK15080267 PRK15080, PRK15080, ethanolamine utilization prote 4e-04
COG1077342 COG1077, MreB, Actin-like ATPase involved in cell 0.002
COG1070502 COG1070, XylB, Sugar (pentulose and hexulose) kina 0.002
COG0849418 COG0849, ftsA, Cell division ATPase FtsA [Cell div 0.004
>gnl|CDD|240227 PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional Back     alignment and domain information 
 Score =  941 bits (2434), Expect = 0.0
 Identities = 396/521 (76%), Positives = 434/521 (83%), Gaps = 23/521 (4%)

Query: 5   GEGPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAM 49
            +GPAIGIDLGTTYSCVGVW               TTPSYV FTDTERLIGDAAKNQVA 
Sbjct: 2   TKGPAIGIDLGTTYSCVGVWKNENVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAR 61

Query: 50  NPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEIS 109
           NP NTVFDAKRLIGR+F D+ VQ DMK WPFKV  G  DKPMI V Y+GE+K F  EEIS
Sbjct: 62  NPENTVFDAKRLIGRKFDDSVVQSDMKHWPFKVTTGGDDKPMIEVTYQGEKKTFHPEEIS 121

Query: 110 SMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAA 169
           SMVL KM+EIAEAYLG  +K+AVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA
Sbjct: 122 SMVLQKMKEIAEAYLGKQVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 181

Query: 170 IAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMV 229
           IAYGLDKK    GEKNVLIFDLGGGTFDVSLLTIE+GIFEVKATAGDTHLGGEDFDNR+V
Sbjct: 182 IAYGLDKKGD--GEKNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLV 239

Query: 230 NHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTI 288
              VQ+FKRKN+ KD+S N RALRRLRT CERAKRTLSS+ Q TIEIDSL+EGID+  TI
Sbjct: 240 EFCVQDFKRKNRGKDLSSNQRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYNVTI 299

Query: 289 TRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGK 348
           +RARFEEL  D FR  ++PVEK L+DA MDK +VH+VVLVGGSTRIPKVQ L++DFFNGK
Sbjct: 300 SRARFEELCGDYFRNTLQPVEKVLKDAGMDKRSVHEVVLVGGSTRIPKVQSLIKDFFNGK 359

Query: 349 ELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRN 408
           E CK+INPDEAVAYGAAVQAAIL+GE + +VQDLLLLDVTPLSLGLETAGGVMT LI RN
Sbjct: 360 EPCKSINPDEAVAYGAAVQAAILTGEQSSQVQDLLLLDVTPLSLGLETAGGVMTKLIERN 419

Query: 409 TTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVC 468
           TTIPTKK Q+F+TY+DNQPGVLIQV+EGER  T+DNNLLGKF L GIPPAPRGVPQI V 
Sbjct: 420 TTIPTKKSQIFTTYADNQPGVLIQVFEGERAMTKDNNLLGKFHLDGIPPAPRGVPQIEVT 479

Query: 469 FDIDANGILNVSAEDKTTAKR-----TRSQSPTTRVDCQRM 504
           FDIDANGILNVSAEDK+T K      T  +   ++ D  RM
Sbjct: 480 FDIDANGILNVSAEDKSTGKSNKITITNDKGRLSKADIDRM 520

Length = 653
>gnl|CDD|215656 pfam00012, HSP70, Hsp70 protein Back     alignment and domain information
>gnl|CDD|212675 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins Back     alignment and domain information
>gnl|CDD|234715 PRK00290, dnaK, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|212681 cd10241, HSPA5-like_NBD, Nucleotide-binding domain of human HSPA5 and similar proteins Back     alignment and domain information
>gnl|CDD|233830 TIGR02350, prok_dnaK, chaperone protein DnaK Back     alignment and domain information
>gnl|CDD|223520 COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|214360 CHL00094, dnaK, heat shock protein 70 Back     alignment and domain information
>gnl|CDD|240403 PTZ00400, PTZ00400, DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>gnl|CDD|184039 PRK13411, PRK13411, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|184038 PRK13410, PRK13410, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|215618 PLN03184, PLN03184, chloroplast Hsp70; Provisional Back     alignment and domain information
>gnl|CDD|212667 cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family Back     alignment and domain information
>gnl|CDD|140213 PTZ00186, PTZ00186, heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>gnl|CDD|212676 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding domain of human HSPA9 and similar proteins Back     alignment and domain information
>gnl|CDD|235360 PRK05183, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|233673 TIGR01991, HscA, Fe-S protein assembly chaperone HscA Back     alignment and domain information
>gnl|CDD|212683 cd11733, HSPA9-like_NBD, Nucleotide-binding domain of human HSPA9, Escherichia coli DnaK, and similar proteins Back     alignment and domain information
>gnl|CDD|212684 cd11734, Ssq1_like_NBD, Nucleotide-binding domain of Saccharomyces cerevisiae Ssq1 and similar proteins Back     alignment and domain information
>gnl|CDD|212670 cd10228, HSPA4_like_NDB, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4 and similar proteins Back     alignment and domain information
>gnl|CDD|212677 cd10235, HscC_like_NBD, Nucleotide-binding domain of Escherichia coli HscC and similar proteins Back     alignment and domain information
>gnl|CDD|212680 cd10238, HSPA14-like_NBD, Nucleotide-binding domain of human HSPA14 and similar proteins Back     alignment and domain information
>gnl|CDD|212678 cd10236, HscA_like_NBD, Nucleotide-binding domain of HscA and similar proteins Back     alignment and domain information
>gnl|CDD|212679 cd10237, HSPA13-like_NBD, Nucleotide-binding domain of human HSPA13 and similar proteins Back     alignment and domain information
>gnl|CDD|212672 cd10230, HYOU1-like_NBD, Nucleotide-binding domain of human HYOU1 and similar proteins Back     alignment and domain information
>gnl|CDD|234955 PRK01433, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|212674 cd10232, ScSsz1p_like_NBD, Nucleotide-binding domain of Saccharmomyces cerevisiae Ssz1pp and similar proteins Back     alignment and domain information
>gnl|CDD|212687 cd11737, HSPA4_NBD, Nucleotide-binding domain of HSPA4 Back     alignment and domain information
>gnl|CDD|212682 cd11732, HSP105-110_like_NBD, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4, HYOU1, and similar proteins Back     alignment and domain information
>gnl|CDD|212689 cd11739, HSPH1_NBD, Nucleotide-binding domain of HSPH1 Back     alignment and domain information
>gnl|CDD|212688 cd11738, HSPA4L_NBD, Nucleotide-binding domain of HSPA4L Back     alignment and domain information
>gnl|CDD|212673 cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins Back     alignment and domain information
>gnl|CDD|212671 cd10229, HSPA12_like_NBD, Nucleotide-binding domain of HSPA12A, HSPA12B and similar proteins Back     alignment and domain information
>gnl|CDD|212668 cd10225, MreB_like, MreB and similar proteins Back     alignment and domain information
>gnl|CDD|236954 PRK11678, PRK11678, putative chaperone; Provisional Back     alignment and domain information
>gnl|CDD|233354 TIGR01312, XylB, D-xylulose kinase Back     alignment and domain information
>gnl|CDD|115385 pfam06723, MreB_Mbl, MreB/Mbl protein Back     alignment and domain information
>gnl|CDD|212669 cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins Back     alignment and domain information
>gnl|CDD|212657 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily Back     alignment and domain information
>gnl|CDD|237564 PRK13930, PRK13930, rod shape-determining protein MreB; Provisional Back     alignment and domain information
>gnl|CDD|213718 TIGR02529, EutJ, ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>gnl|CDD|129982 TIGR00904, mreB, cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>gnl|CDD|237563 PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>gnl|CDD|227157 COG4820, EutJ, Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|198375 cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases Back     alignment and domain information
>gnl|CDD|184403 PRK13929, PRK13929, rod-share determining protein MreBH; Provisional Back     alignment and domain information
>gnl|CDD|237904 PRK15080, PRK15080, ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>gnl|CDD|224003 COG1077, MreB, Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|223996 COG1070, XylB, Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|223918 COG0849, ftsA, Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 539
KOG0100663 consensus Molecular chaperones GRP78/BiP/KAR2, HSP 100.0
PTZ00186657 heat shock 70 kDa precursor protein; Provisional 100.0
KOG0101620 consensus Molecular chaperones HSP70/HSC70, HSP70 100.0
PTZ00009 653 heat shock 70 kDa protein; Provisional 100.0
PRK13410 668 molecular chaperone DnaK; Provisional 100.0
PRK13411 653 molecular chaperone DnaK; Provisional 100.0
PTZ00400663 DnaK-type molecular chaperone; Provisional 100.0
PLN03184673 chloroplast Hsp70; Provisional 100.0
KOG0102640 consensus Molecular chaperones mortalin/PBP74/GRP7 100.0
PRK00290627 dnaK molecular chaperone DnaK; Provisional 100.0
TIGR01991599 HscA Fe-S protein assembly chaperone HscA. The Hea 100.0
PRK05183616 hscA chaperone protein HscA; Provisional 100.0
TIGR02350595 prok_dnaK chaperone protein DnaK. Members of this 100.0
CHL00094621 dnaK heat shock protein 70 100.0
PRK01433595 hscA chaperone protein HscA; Provisional 100.0
PF00012602 HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho 100.0
COG0443579 DnaK Molecular chaperone [Posttranslational modifi 100.0
KOG0103 727 consensus Molecular chaperones HSP105/HSP110/SSE1, 100.0
KOG0104 902 consensus Molecular chaperones GRP170/SIL1, HSP70 100.0
PRK11678450 putative chaperone; Provisional 100.0
PRK13928336 rod shape-determining protein Mbl; Provisional 100.0
PRK13929335 rod-share determining protein MreBH; Provisional 100.0
TIGR00904333 mreB cell shape determining protein, MreB/Mrl fami 100.0
PRK13927334 rod shape-determining protein MreB; Provisional 100.0
PRK13930335 rod shape-determining protein MreB; Provisional 100.0
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 100.0
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 100.0
COG1077342 MreB Actin-like ATPase involved in cell morphogene 99.97
PRK15080267 ethanolamine utilization protein EutJ; Provisional 99.97
TIGR01174371 ftsA cell division protein FtsA. This bacterial ce 99.91
PRK09472420 ftsA cell division protein FtsA; Reviewed 99.91
COG0849418 ftsA Cell division ATPase FtsA [Cell division and 99.82
cd00012371 ACTIN Actin; An ubiquitous protein involved in the 99.75
COG4820277 EutJ Ethanolamine utilization protein, possible ch 99.75
smart00268373 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki 99.71
PRK13917344 plasmid segregation protein ParM; Provisional 99.67
TIGR03739320 PRTRC_D PRTRC system protein D. A novel genetic sy 99.63
PTZ00280414 Actin-related protein 3; Provisional 99.63
PF00022393 Actin: Actin; InterPro: IPR004000 Actin [, ] is a 99.56
PTZ00281376 actin; Provisional 99.51
PTZ00452375 actin; Provisional 99.5
PTZ00004378 actin-2; Provisional 99.49
PTZ00466380 actin-like protein; Provisional 99.44
PF06406318 StbA: StbA protein; InterPro: IPR009440 This entry 99.31
TIGR01175348 pilM type IV pilus assembly protein PilM. This pro 99.15
KOG0679426 consensus Actin-related protein - Arp4p/Act3p [Cyt 99.09
TIGR00241248 CoA_E_activ CoA-substrate-specific enzyme activase 99.06
COG5277444 Actin and related proteins [Cytoskeleton] 99.05
PF11104340 PilM_2: Type IV pilus assembly protein PilM;; PDB: 99.03
PF075201002 SrfB: Virulence factor SrfB; InterPro: IPR009216 T 98.98
COG4972354 PilM Tfp pilus assembly protein, ATPase PilM [Cell 98.89
PRK10719475 eutA reactivating factor for ethanolamine ammonia 98.81
TIGR02259432 benz_CoA_red_A benzoyl-CoA reductase, bcr type, su 98.76
TIGR03192293 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s 98.7
TIGR03286404 methan_mark_15 putative methanogenesis marker prot 98.69
PRK13317277 pantothenate kinase; Provisional 98.57
COG1924396 Activator of 2-hydroxyglutaryl-CoA dehydratase (HS 98.56
KOG0677389 consensus Actin-related protein Arp2/3 complex, su 98.47
KOG0676372 consensus Actin and related proteins [Cytoskeleton 98.47
PF08841332 DDR: Diol dehydratase reactivase ATPase-like domai 98.16
TIGR02261262 benz_CoA_red_D benzoyl-CoA reductase, bcr type, su 98.12
PF06277473 EutA: Ethanolamine utilisation protein EutA; Inter 97.97
KOG0797618 consensus Actin-related protein [Cytoskeleton] 97.85
COG44571014 SrfB Uncharacterized protein conserved in bacteria 97.62
PF01869271 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In 97.6
PF14574412 DUF4445: Domain of unknown function (DUF4445); PDB 97.42
PF02782198 FGGY_C: FGGY family of carbohydrate kinases, C-ter 97.17
PRK15027484 xylulokinase; Provisional 96.51
TIGR01315541 5C_CHO_kinase FGGY-family pentulose kinase. This m 96.43
PLN02669556 xylulokinase 96.4
COG1069544 AraB Ribulose kinase [Energy production and conver 96.36
COG4819473 EutA Ethanolamine utilization protein, possible ch 96.22
TIGR00555279 panK_eukar pantothenate kinase, eukaryotic/staphyl 96.19
TIGR00744318 ROK_glcA_fam ROK family protein (putative glucokin 96.12
KOG0680400 consensus Actin-related protein - Arp6p [Cytoskele 95.97
PRK00047498 glpK glycerol kinase; Provisional 95.89
PRK04123548 ribulokinase; Provisional 95.88
PTZ00294504 glycerol kinase-like protein; Provisional 95.86
TIGR01312481 XylB D-xylulose kinase. D-xylulose kinase (XylB) g 95.82
TIGR02628465 fuculo_kin_coli L-fuculokinase. Members of this fa 95.79
PRK10331470 L-fuculokinase; Provisional 95.73
TIGR01311493 glycerol_kin glycerol kinase. This model describes 95.71
TIGR01234536 L-ribulokinase L-ribulokinase. This enzyme catalyz 95.68
PF01968290 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPr 95.63
TIGR01314505 gntK_FGGY gluconate kinase, FGGY type. Gluconate i 95.58
PRK11031496 guanosine pentaphosphate phosphohydrolase; Provisi 95.52
TIGR02627454 rhamnulo_kin rhamnulokinase. This model describes 95.41
KOG2517516 consensus Ribulose kinase and related carbohydrate 95.4
PLN02295512 glycerol kinase 95.34
PRK10854513 exopolyphosphatase; Provisional 95.34
PRK10939520 autoinducer-2 (AI-2) kinase; Provisional 95.24
PF14450120 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B 95.01
PRK10640471 rhaB rhamnulokinase; Provisional 94.94
KOG2531545 consensus Sugar (pentulose and hexulose) kinases [ 94.55
KOG0681645 consensus Actin-related protein - Arp5p [Cytoskele 94.36
KOG0681 645 consensus Actin-related protein - Arp5p [Cytoskele 94.14
COG1070502 XylB Sugar (pentulose and hexulose) kinases [Carbo 93.83
PF02541285 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I 93.49
PF07318343 DUF1464: Protein of unknown function (DUF1464); In 92.82
PRK09557301 fructokinase; Reviewed 92.32
PRK09698302 D-allose kinase; Provisional 92.16
PRK03011358 butyrate kinase; Provisional 92.08
PF03702364 UPF0075: Uncharacterised protein family (UPF0075); 92.05
COG0248492 GppA Exopolyphosphatase [Nucleotide transport and 91.66
PRK14878323 UGMP family protein; Provisional 91.16
TIGR03706300 exo_poly_only exopolyphosphatase. It appears that 91.16
PF02543360 CmcH_NodU: Carbamoyltransferase; InterPro: IPR0036 90.56
PTZ00288405 glucokinase 1; Provisional 90.44
smart00842187 FtsA Cell division protein FtsA. FtsA is essential 90.39
PLN02920398 pantothenate kinase 1 90.24
COG1548330 Predicted transcriptional regulator/sugar kinase [ 89.97
PLN02666 1275 5-oxoprolinase 89.76
KOG2708336 consensus Predicted metalloprotease with chaperone 89.05
PTZ00340345 O-sialoglycoprotein endopeptidase-like protein; Pr 88.55
PRK09585365 anmK anhydro-N-acetylmuramic acid kinase; Reviewed 88.52
PRK09604332 UGMP family protein; Validated 87.62
PRK14101 638 bifunctional glucokinase/RpiR family transcription 87.45
COG0533342 QRI7 Metal-dependent proteases with possible chape 87.23
COG0554499 GlpK Glycerol kinase [Energy production and conver 86.1
TIGR00329305 gcp_kae1 metallohydrolase, glycoprotease/Kae1 fami 85.51
PF14450120 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B 85.39
TIGR03723314 bact_gcp putative glycoprotease GCP. This model re 85.29
TIGR03281326 methan_mark_12 putative methanogenesis marker prot 83.52
COG2377371 Predicted molecular chaperone distantly related to 83.44
TIGR03722322 arch_KAE1 universal archaeal protein Kae1. This fa 83.4
COG5026466 Hexokinase [Carbohydrate transport and metabolism] 82.27
>KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=6.8e-120  Score=859.23  Aligned_cols=525  Identities=64%  Similarity=0.995  Sum_probs=512.3

Q ss_pred             CCCEEEEEcCccceeeeEE---------------ecceEEEecCCceEecHHHHhhHhhCCCchhhhhhHhhCCCCCChh
Q 009246            6 EGPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDAS   70 (539)
Q Consensus         6 ~~~vvGID~GTt~s~va~~---------------~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~   70 (539)
                      ...+||||||||||||+++               .+||+|+|.+++|++|+.|+++...+|++++++.||+||+.|+++.
T Consensus        35 ~gtvigIdLGTTYsCVgV~kNgrvEIiANdQGNRItPSyVaFt~derLiGdAAKNQ~~~NPenTiFD~KRLIGr~~~d~~  114 (663)
T KOG0100|consen   35 LGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTDDERLIGDAAKNQLTSNPENTIFDAKRLIGRKFNDKS  114 (663)
T ss_pred             cceEEEEecCCceeeEEEEeCCeEEEEecCCCCccccceeeeccchhhhhhHhhcccccCcccceechHHHhCcccCChh
Confidence            5679999999999999998               7999999999999999999999999999999999999999999999


Q ss_pred             hhccccccCeEEEecCCCCceEEEEEc-CCceEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHH
Q 009246           71 VQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKD  149 (539)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~  149 (539)
                      +|.+++.|||+++. .+++|.+.|... ++.+.++|+++++|+|.++++.|+.|+|.+++++|+||||||++.||+++++
T Consensus       115 vq~Dik~~Pfkvv~-k~~kp~i~v~v~~g~~K~FtPeEiSaMiL~KMKe~AEayLGkkv~~AVvTvPAYFNDAQrQATKD  193 (663)
T KOG0100|consen  115 VQKDIKFLPFKVVN-KDGKPYIQVKVGGGETKVFTPEEISAMILTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKD  193 (663)
T ss_pred             hhhhhhcCceEEEc-CCCCccEEEEccCCcccccCHHHHHHHHHHHHHHHHHHHhCCcccceEEecchhcchHHHhhhcc
Confidence            99999999999986 778999999988 5688999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHH
Q 009246          150 AGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMV  229 (539)
Q Consensus       150 Aa~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~  229 (539)
                      |...|||+++++|+||+|||++|++++.   ..+.++||||+||||||||++.+.+|.|+|+++.|+.++||.+||++++
T Consensus       194 AGtIAgLnV~RIiNePTaAAIAYGLDKk---~gEknilVfDLGGGTFDVSlLtIdnGVFeVlaTnGDThLGGEDFD~rvm  270 (663)
T KOG0100|consen  194 AGTIAGLNVVRIINEPTAAAIAYGLDKK---DGEKNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRVM  270 (663)
T ss_pred             cceeccceEEEeecCccHHHHHhccccc---CCcceEEEEEcCCceEEEEEEEEcCceEEEEecCCCcccCccchHHHHH
Confidence            9999999999999999999999999887   3678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceEEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHH
Q 009246          230 NHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVE  309 (539)
Q Consensus       230 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~i~i~~~~~g~d~~~~itr~~~e~~~~~~~~~i~~~i~  309 (539)
                      +|+.+-|+++++.+++.+.+++.+|+++||+||+.||+..++.+.++++++|.||+-++||+.||++..+++.+.+.+++
T Consensus       271 ~~fiklykkK~gkDv~kdnkA~~KLrRe~EkAKRaLSsqhq~riEIeS~fdG~DfSEtLtRAkFEElNmDLFr~TlkPv~  350 (663)
T KOG0100|consen  271 EYFIKLYKKKHGKDVRKDNKAVQKLRREVEKAKRALSSQHQVRIEIESLFDGVDFSETLTRAKFEELNMDLFRKTLKPVQ  350 (663)
T ss_pred             HHHHHHHhhhcCCccchhhHHHHHHHHHHHHHHhhhccccceEEeeeeccccccccchhhhhHHHHhhhHHHHHhhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhCCCCccccceeeeeccc
Q 009246          310 KCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTP  389 (539)
Q Consensus       310 ~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~~~~~~~~~~~~~d~~~  389 (539)
                      ++|+++++.+.+|+.|+||||++|+|.||+.|+++|.|+++....||++|||+|||.+|..++|.  ....++++.|++|
T Consensus       351 kvl~Ds~lkKsdideiVLVGGsTrIPKvQqllk~fF~GKepskGinPdEAVAYGAAVQaGvlsGe--e~t~divLLDv~p  428 (663)
T KOG0100|consen  351 KVLEDSDLKKSDIDEIVLVGGSTRIPKVQQLLKDFFNGKEPSKGINPDEAVAYGAAVQAGVLSGE--EDTGDIVLLDVNP  428 (663)
T ss_pred             HHHhhcCcccccCceEEEecCcccChhHHHHHHHHhCCCCccCCCChHHHHHhhhhhhhcccccc--cCcCcEEEEeecc
Confidence            99999999999999999999999999999999999999999999999999999999999999964  5678899999999


Q ss_pred             cccceeeecCeEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCcccccCCcceeEEEEeCCCCCCCCcCEEEEEE
Q 009246          390 LSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCF  469 (539)
Q Consensus       390 ~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~~~i~v~~  469 (539)
                      +++||++.+|.|..+||||+.||++++..|+++.|||+.+.|.+|+|++.+..+|++||.|.+.||||+|+|.|+|+|+|
T Consensus       429 LtlGIETvGGVMTklI~RNTviPTkKSQvFsTa~DnQ~tV~I~vyEGER~mtkdn~lLGkFdltGipPAPRGvpqIEVtF  508 (663)
T KOG0100|consen  429 LTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAQDNQPTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQIEVTF  508 (663)
T ss_pred             ccceeeeecceeeccccCCcccCccccceeeecccCCceEEEEEeeccccccccccccccccccCCCCCCCCCccEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCeeEEEEEEEcCCCceeeEEcCCChhhhHHHHHHHHhcCCcccHHHHHhhhhhcCCCCCCCCC
Q 009246          470 DIDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMPWKTM  536 (539)
Q Consensus       470 ~~d~~g~l~v~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  536 (539)
                      ++|.||+|+|+|.|+.+|++++|++++....++.++++||.+.+++|..+++..+++.++||+||+-
T Consensus       509 evDangiL~VsAeDKgtg~~~kitItNd~~rLt~EdIerMv~eAekFAeeDk~~KekieaRN~LE~Y  575 (663)
T KOG0100|consen  509 EVDANGILQVSAEDKGTGKKEKITITNDKGRLTPEDIERMVNEAEKFAEEDKKLKEKIEARNELESY  575 (663)
T ss_pred             EEccCceEEEEeeccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999973

>PTZ00186 heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>KOG0101 consensus Molecular chaperones HSP70/HSC70, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00009 heat shock 70 kDa protein; Provisional Back     alignment and domain information
>PRK13410 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PRK13411 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PTZ00400 DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>PLN03184 chloroplast Hsp70; Provisional Back     alignment and domain information
>KOG0102 consensus Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK00290 dnaK molecular chaperone DnaK; Provisional Back     alignment and domain information
>TIGR01991 HscA Fe-S protein assembly chaperone HscA Back     alignment and domain information
>PRK05183 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>TIGR02350 prok_dnaK chaperone protein DnaK Back     alignment and domain information
>CHL00094 dnaK heat shock protein 70 Back     alignment and domain information
>PRK01433 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins Back     alignment and domain information
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0104 consensus Molecular chaperones GRP170/SIL1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK11678 putative chaperone; Provisional Back     alignment and domain information
>PRK13928 rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>PRK13929 rod-share determining protein MreBH; Provisional Back     alignment and domain information
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>PRK13927 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PRK13930 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>TIGR01174 ftsA cell division protein FtsA Back     alignment and domain information
>PRK09472 ftsA cell division protein FtsA; Reviewed Back     alignment and domain information
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton Back     alignment and domain information
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] Back     alignment and domain information
>smart00268 ACTIN Actin Back     alignment and domain information
>PRK13917 plasmid segregation protein ParM; Provisional Back     alignment and domain information
>TIGR03739 PRTRC_D PRTRC system protein D Back     alignment and domain information
>PTZ00280 Actin-related protein 3; Provisional Back     alignment and domain information
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton Back     alignment and domain information
>PTZ00281 actin; Provisional Back     alignment and domain information
>PTZ00452 actin; Provisional Back     alignment and domain information
>PTZ00004 actin-2; Provisional Back     alignment and domain information
>PTZ00466 actin-like protein; Provisional Back     alignment and domain information
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA [] Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>KOG0679 consensus Actin-related protein - Arp4p/Act3p [Cytoskeleton] Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>COG5277 Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A Back     alignment and domain information
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function Back     alignment and domain information
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional Back     alignment and domain information
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A Back     alignment and domain information
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit Back     alignment and domain information
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 Back     alignment and domain information
>PRK13317 pantothenate kinase; Provisional Back     alignment and domain information
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] Back     alignment and domain information
>KOG0677 consensus Actin-related protein Arp2/3 complex, subunit Arp2 [Cytoskeleton] Back     alignment and domain information
>KOG0676 consensus Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ] Back     alignment and domain information
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D Back     alignment and domain information
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon Back     alignment and domain information
>KOG0797 consensus Actin-related protein [Cytoskeleton] Back     alignment and domain information
>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown] Back     alignment and domain information
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis Back     alignment and domain information
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X Back     alignment and domain information
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>PRK15027 xylulokinase; Provisional Back     alignment and domain information
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase Back     alignment and domain information
>PLN02669 xylulokinase Back     alignment and domain information
>COG1069 AraB Ribulose kinase [Energy production and conversion] Back     alignment and domain information
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase) Back     alignment and domain information
>KOG0680 consensus Actin-related protein - Arp6p [Cytoskeleton] Back     alignment and domain information
>PRK00047 glpK glycerol kinase; Provisional Back     alignment and domain information
>PRK04123 ribulokinase; Provisional Back     alignment and domain information
>PTZ00294 glycerol kinase-like protein; Provisional Back     alignment and domain information
>TIGR01312 XylB D-xylulose kinase Back     alignment and domain information
>TIGR02628 fuculo_kin_coli L-fuculokinase Back     alignment and domain information
>PRK10331 L-fuculokinase; Provisional Back     alignment and domain information
>TIGR01311 glycerol_kin glycerol kinase Back     alignment and domain information
>TIGR01234 L-ribulokinase L-ribulokinase Back     alignment and domain information
>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3 Back     alignment and domain information
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type Back     alignment and domain information
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional Back     alignment and domain information
>TIGR02627 rhamnulo_kin rhamnulokinase Back     alignment and domain information
>KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02295 glycerol kinase Back     alignment and domain information
>PRK10854 exopolyphosphatase; Provisional Back     alignment and domain information
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional Back     alignment and domain information
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T Back     alignment and domain information
>PRK10640 rhaB rhamnulokinase; Provisional Back     alignment and domain information
>KOG2531 consensus Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] Back     alignment and domain information
>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] Back     alignment and domain information
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3 Back     alignment and domain information
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length Back     alignment and domain information
>PRK09557 fructokinase; Reviewed Back     alignment and domain information
>PRK09698 D-allose kinase; Provisional Back     alignment and domain information
>PRK03011 butyrate kinase; Provisional Back     alignment and domain information
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P Back     alignment and domain information
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14878 UGMP family protein; Provisional Back     alignment and domain information
>TIGR03706 exo_poly_only exopolyphosphatase Back     alignment and domain information
>PF02543 CmcH_NodU: Carbamoyltransferase; InterPro: IPR003696 The putative O-carbamoyltransferases (O-Cases) encoded by the nodU genes of Rhizobium fredii and Bradyrhizobium japonicum are involved in the synthesis of nodulation factors [] Back     alignment and domain information
>PTZ00288 glucokinase 1; Provisional Back     alignment and domain information
>smart00842 FtsA Cell division protein FtsA Back     alignment and domain information
>PLN02920 pantothenate kinase 1 Back     alignment and domain information
>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02666 5-oxoprolinase Back     alignment and domain information
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional Back     alignment and domain information
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed Back     alignment and domain information
>PRK09604 UGMP family protein; Validated Back     alignment and domain information
>PRK14101 bifunctional glucokinase/RpiR family transcriptional regulator; Provisional Back     alignment and domain information
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0554 GlpK Glycerol kinase [Energy production and conversion] Back     alignment and domain information
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family Back     alignment and domain information
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T Back     alignment and domain information
>TIGR03723 bact_gcp putative glycoprotease GCP Back     alignment and domain information
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12 Back     alignment and domain information
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03722 arch_KAE1 universal archaeal protein Kae1 Back     alignment and domain information
>COG5026 Hexokinase [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query539
3c7n_B554 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 0.0
1yuw_A554 Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214 0.0
2v7z_A543 Crystal Structure Of The 70-Kda Heat Shock Cognate 0.0
2qw9_B394 Crystal Structure Of Bovine Hsc70 (1-394aa)in The A 1e-172
2qwn_A394 Crystal Structure Of Disulfide-Bond-Crosslinked Com 1e-171
1hpm_A386 How Potassium Affects The Activity Of The Molecular 1e-171
1ngb_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-170
1bup_A386 T13s Mutant Of Bovine 70 Kilodalton Heat Shock Prot 1e-170
1ngd_A386 Structural Basis Of The 70-kilodalton Heat Shock Co 1e-170
1ngf_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-170
1ngh_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-170
1atr_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 1e-170
1nga_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-170
1ngg_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-170
1ngc_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-170
1nge_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-170
1ba0_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 1e-170
1ats_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 1e-170
3cqx_A386 Chaperone Complex Length = 386 1e-170
1hx1_A400 Crystal Structure Of A Bag Domain In Complex With T 1e-169
1ba1_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 1e-169
3fzf_A381 Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP 1e-169
1kaz_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71e 1e-169
1kay_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71a 1e-169
1kax_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71m 1e-168
2bup_A381 T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 1e-168
1qqo_A378 E175s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-168
1qqm_A378 D199s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-167
1qqn_A378 D206s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-165
3i33_A404 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-165
2e8a_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 1e-165
2e88_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 1e-165
3a8y_A392 Crystal Structure Of The Complex Between The Bag5 B 1e-165
3jxu_A409 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-165
3d2f_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 1e-164
1hjo_A380 Atpase Domain Of Human Heat Shock 70kda Protein 1 L 1e-164
1s3x_A382 The Crystal Structure Of The Human Hsp70 Atpase Dom 1e-164
3kvg_A400 Crystal Structure Of The N-Terminal Domain Of Hsp70 1e-163
3gdq_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-162
4fsv_A387 Crystal Structure Of A Heat Shock 70kda Protein 2 ( 1e-162
3d2e_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70, 1e-161
3fe1_A403 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-161
3gl1_A387 Crystal Structure Of Atpase Domain Of Ssb1 Chaperon 1e-135
3iuc_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-133
3ldl_A384 Crystal Structure Of Human Grp78 (70kda Heat Shock 1e-133
3qfp_A390 Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE D 1e-129
3qfu_A394 Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXE 1e-129
2kho_A605 Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAP 1e-128
4b9q_A605 Open Conformation Of Atp-Bound Hsp70 Homolog Dnak L 1e-123
2v7y_A509 Crystal Structure Of The Molecular Chaperone Dnak F 1e-117
1dkg_D383 Crystal Structure Of The Nucleotide Exchange Factor 1e-90
1xqs_C191 Crystal Structure Of The Hspbp1 Core Domain Complex 2e-85
3c7n_A 668 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 2e-54
2qxl_A 658 Crystal Structure Analysis Of Sse1, A Yeast Hsp110 2e-54
3d2f_A 675 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 3e-54
3d2e_A 675 Crystal Structure Of A Complex Of Sse1p And Hsp70, 4e-53
1ckr_A159 High Resolution Solution Structure Of The Heat Shoc 5e-43
4gni_A409 Structure Of The Ssz1 Atpase Bound To Atp And Magne 7e-41
3dob_A152 Peptide-Binding Domain Of Heat Shock 70 Kda Protein 1e-37
3h0x_A152 Crystal Structure Of Peptide-Binding Domain Of Kar2 9e-36
3dpo_A219 Crystal Structure Of The Substrate Binding Domain O 5e-31
1dkx_A219 The Substrate Binding Domain Of Dnak In Complex Wit 5e-31
1dky_A219 The Substrate Binding Domain Of Dnak In Complex Wit 5e-31
3dqg_A151 Peptide-Binding Domain Of Heat Shock 70 Kda Protein 9e-31
2op6_A152 Peptide-Binding Domain Of Heat Shock 70 Kda Protein 1e-30
1bpr_A191 Nmr Structure Of The Substrate Binding Domain Of Dn 2e-30
1q5l_A135 Nmr Structure Of The Substrate Binding Domain Of Dn 4e-30
1dg4_A115 Nmr Structure Of The Substrate Binding Domain Of Dn 5e-30
3n8e_A182 Substrate Binding Domain Of The Human Heat Shock 70 2e-29
1u00_A227 Hsca Substrate Binding Domain Complexed With The Is 3e-18
1jcf_A344 Mreb From Thermotoga Maritima, Trigonal Length = 34 2e-05
1jce_A344 Mreb From Thermotoga Maritima Length = 344 6e-05
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 554 Back     alignment and structure 
Iteration: 1

 Score =  764 bits (1972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/519 (73%), Positives = 420/519 (80%), Gaps = 23/519 (4%)
Query: 6   EGPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMN 50
           +GPA+GIDLGTTYSCVGV+               TTPSYV FTDTERLIGDAAKNQVAMN
Sbjct: 3   KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 62
Query: 51  PTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISS 110
           PTNTVFDAKRLIGRRF DA VQ DMK WPF V+   A +P + V YKGE K F  EE+SS
Sbjct: 63  PTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEVSS 121
Query: 111 MVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAI 170
           MVL KM+EIAEAYLG T+ NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 181
Query: 171 AYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVN 230
           AYGLDKK  +  E+NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNRMVN
Sbjct: 182 AYGLDKKVGA--ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 231 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITR 290
           HF+ EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFY++ITR
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 299
Query: 291 ARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKEL 350
           ARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL
Sbjct: 300 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 359
Query: 351 CKNINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTT 410
            K+INPDE           ILSG+ +E VQD             ETAGGVMTVLI RNTT
Sbjct: 360 NKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTT 419
Query: 411 IPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFD 470
           IPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FD
Sbjct: 420 IPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFD 479
Query: 471 IDANGILNVSAEDKTTAKR-----TRSQSPTTRVDCQRM 504
           IDANGILNVSA DK+T K      T  +   ++ D +RM
Sbjct: 480 IDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERM 518
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A MUTANT Length = 554 Back     alignment and structure
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein From Rattus Norvegicus In Post-Atp Hydrolysis State Length = 543 Back     alignment and structure
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 394 Back     alignment and structure
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular Chaperone Hsc70. Ii. Potassium Binds Specifically In The Atpase Active Site Length = 386 Back     alignment and structure
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 386 Back     alignment and structure
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal 1nge 3 Length = 386 Back     alignment and structure
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|3CQX|A Chain A, Chaperone Complex Length = 386 Back     alignment and structure
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The Hsc70 Atpase Domain Length = 400 Back     alignment and structure
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal Mutant With Cys 17 Replaced By Lys Length = 386 Back     alignment and structure
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP Length = 381 Back     alignment and structure
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant Length = 381 Back     alignment and structure
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant Length = 381 Back     alignment and structure
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant Length = 381 Back     alignment and structure
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 Length = 381 Back     alignment and structure
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2 (Hsp70-2) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 404 Back     alignment and structure
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In Complex With Amp-Pnp Length = 391 Back     alignment and structure
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The Apo Form Length = 391 Back     alignment and structure
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And Hsp70 Nbd Length = 392 Back     alignment and structure
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a (Hsp70-1) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 409 Back     alignment and structure
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 382 Back     alignment and structure
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1 Length = 380 Back     alignment and structure
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain Length = 382 Back     alignment and structure
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 (Cgd2_20) From Cryptosporidium Parvum In Complex With Amppnp Length = 400 Back     alignment and structure
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1-Like Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 408 Back     alignment and structure
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2) From Homo Sapiens At 1.80 A Resolution Length = 387 Back     alignment and structure
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 382 Back     alignment and structure
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6 (Hsp70b') Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 403 Back     alignment and structure
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A Member Of The Hsp70 Family, From Saccharomyces Cerevisiae Length = 387 Back     alignment and structure
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5 (BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP Length = 408 Back     alignment and structure
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5 BIP) Atpase Domain In Complex With Atp Length = 384 Back     alignment and structure
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN Length = 390 Back     alignment and structure
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE (1-605) Complexed With Adp And Substrate Length = 605 Back     alignment and structure
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak Length = 605 Back     alignment and structure
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis State Length = 509 Back     alignment and structure
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 383 Back     alignment and structure
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With The Fragment Of Hsp70 Atpase Domain Length = 191 Back     alignment and structure
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 668 Back     alignment and structure
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110 Length = 658 Back     alignment and structure
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 675 Back     alignment and structure
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 675 Back     alignment and structure
>pdb|1CKR|A Chain A, High Resolution Solution Structure Of The Heat Shock Cognate-70 Kd Substrate Binding Domain Obtained By Multidimensional Nmr Techniques Length = 159 Back     alignment and structure
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium Length = 409 Back     alignment and structure
>pdb|3DOB|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F44e5.5 From C.Elegans. Length = 152 Back     alignment and structure
>pdb|3H0X|A Chain A, Crystal Structure Of Peptide-Binding Domain Of Kar2 Protein From Saccharomyces Cerevisiae Length = 152 Back     alignment and structure
>pdb|3DPO|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E. Coli Dnak In Complex With A Short Pyrrhocoricin-Derived Inhibitor Peptide Length = 219 Back     alignment and structure
>pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A Substrate Peptide, Determined From Type 1 Selenomethionyl Crystals Length = 219 Back     alignment and structure
>pdb|1DKY|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A Substrate Peptide, Determined From Type 2 Native Crystals Length = 219 Back     alignment and structure
>pdb|3DQG|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F, Mitochondrial Precursor, From Caenorhabditis Elegans. Length = 151 Back     alignment and structure
>pdb|2OP6|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein D Precursor From C.Elegans Length = 152 Back     alignment and structure
>pdb|1BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak, Minimized Average Structure Length = 191 Back     alignment and structure
>pdb|1Q5L|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak Bound To The Peptide Nrllltg Length = 135 Back     alignment and structure
>pdb|1DG4|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak In The Apo Form Length = 115 Back     alignment and structure
>pdb|3N8E|A Chain A, Substrate Binding Domain Of The Human Heat Shock 70kda Prote (Mortalin) Length = 182 Back     alignment and structure
>pdb|1U00|A Chain A, Hsca Substrate Binding Domain Complexed With The Iscu Recognition Peptide Elppvkihc Length = 227 Back     alignment and structure
>pdb|1JCF|A Chain A, Mreb From Thermotoga Maritima, Trigonal Length = 344 Back     alignment and structure
>pdb|1JCE|A Chain A, Mreb From Thermotoga Maritima Length = 344 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query539
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 0.0
3d2f_A 675 Heat shock protein homolog SSE1; nucleotide exchan 0.0
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 0.0
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 0.0
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 0.0
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 0.0
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 0.0
3dob_A152 Heat shock 70 kDa protein F44E5.5; structural geno 7e-78
3h0x_A152 78 kDa glucose-regulated protein homolog; structur 9e-78
2op6_A152 Heat shock 70 kDa protein D; HSP70/peptide-binding 4e-77
3n8e_A182 Stress-70 protein, mitochondrial; beta-sandwich, h 6e-70
4e81_A219 Chaperone protein DNAK; chaperone; 1.90A {Escheric 9e-66
1q5l_A135 Chaperone protein DNAK; HSP70, chaperone, heat sho 6e-65
1u00_A227 HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A 5e-62
3dqg_A151 Heat shock 70 kDa protein F; structural genomics, 1e-61
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 3e-32
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 1e-24
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 7e-22
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 2e-13
3js6_A355 Uncharacterized PARM protein; partition, segregati 3e-13
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 5e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 3e-05
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 6e-05
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Length = 554 Back     alignment and structure
 Score = 1104 bits (2858), Expect = 0.0
 Identities = 400/519 (77%), Positives = 440/519 (84%), Gaps = 23/519 (4%)

Query: 6   EGPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMN 50
           +GPA+GIDLGTTYSCVGV+               TTPSYV FTDTERLIGDAAKNQVAMN
Sbjct: 3   KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 62

Query: 51  PTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISS 110
           PTNTVFDAKRLIGRRF DA VQ DMK WPF V+     +P + V YKGE K F  EE+SS
Sbjct: 63  PTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDA-GRPKVQVEYKGETKSFYPEEVSS 121

Query: 111 MVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAI 170
           MVL KM+EIAEAYLG T+ NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 181

Query: 171 AYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVN 230
           AYGLDKK     E+NVLIFDLGGGTFDVS+LTI  GIFEVK+TAGDTHLGGEDFDNRMVN
Sbjct: 182 AYGLDKKVG--AERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVN 239

Query: 231 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITR 290
           HF+ EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFY++ITR
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 299

Query: 291 ARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKEL 350
           ARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL
Sbjct: 300 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 359

Query: 351 CKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTT 410
            K+INPDEAVAYGAAVQAAILSG+ +E VQDLLLLDVTPLSLG+ETAGGVMTVLI RNTT
Sbjct: 360 NKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTT 419

Query: 411 IPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFD 470
           IPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FD
Sbjct: 420 IPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFD 479

Query: 471 IDANGILNVSAEDKTTAKR-----TRSQSPTTRVDCQRM 504
           IDANGILNVSA DK+T K      T  +   ++ D +RM
Sbjct: 480 IDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERM 518
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Length = 675 Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* 1ngf_A* ... Length = 404 Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Length = 605 Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Length = 509 Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Length = 383 Back     alignment and structure
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} Length = 152 Back     alignment and structure
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A Length = 152 Back     alignment and structure
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} Length = 152 Back     alignment and structure
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} Length = 182 Back     alignment and structure
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A Length = 219 Back     alignment and structure
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 Length = 135 Back     alignment and structure
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 Length = 227 Back     alignment and structure
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} Length = 151 Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Length = 272 Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Length = 320 Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Length = 346 Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Length = 329 Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Length = 355 Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Length = 419 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Length = 377 Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Length = 515 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query539
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 100.0
4b9q_A605 Chaperone protein DNAK; HET: ATP; 2.40A {Escherich 100.0
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 100.0
3d2f_A 675 Heat shock protein homolog SSE1; nucleotide exchan 100.0
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 100.0
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 100.0
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 100.0
4gni_A409 Putative heat shock protein; HSP70-type ATPase, AT 100.0
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 100.0
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 100.0
3dob_A152 Heat shock 70 kDa protein F44E5.5; structural geno 99.97
3h0x_A152 78 kDa glucose-regulated protein homolog; structur 99.97
3dqg_A151 Heat shock 70 kDa protein F; structural genomics, 99.96
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 99.96
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 99.96
3n8e_A182 Stress-70 protein, mitochondrial; beta-sandwich, h 99.96
4e81_A219 Chaperone protein DNAK; chaperone; 1.90A {Escheric 99.95
2op6_A152 Heat shock 70 kDa protein D; HSP70/peptide-binding 99.95
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 99.95
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 99.95
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 99.94
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 99.94
1u00_A227 HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A 99.92
1q5l_A135 Chaperone protein DNAK; HSP70, chaperone, heat sho 99.9
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 99.89
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 99.84
3js6_A355 Uncharacterized PARM protein; partition, segregati 99.81
4ehu_A276 Activator of 2-hydroxyisocaproyl-COA dehydratase; 99.79
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 99.74
3qb0_A498 Actin-related protein 4; actin fold, ATP binding, 99.64
3dwl_A427 Actin-related protein 3; propellor, actin-binding, 99.64
4fo0_A593 Actin-related protein 8; chromatin remodeling, nuc 99.39
2d0o_A610 DIOL dehydratase-reactivating factor large subunit 99.31
1nbw_A607 Glycerol dehydratase reactivase alpha subunit; mol 99.29
1hux_A270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 98.93
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 98.46
4am6_A655 Actin-like protein ARP8; nuclear protein, chromati 98.17
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 97.63
1t6c_A315 Exopolyphosphatase; alpha/beta protein, actin-like 97.23
3mdq_A315 Exopolyphosphatase; structural genomics, joint cen 97.03
4db3_A327 Glcnac kinase, N-acetyl-D-glucosamine kinase; stru 97.0
3vgl_A321 Glucokinase; ROK family, transferase; HET: BGC ANP 97.0
3r8e_A321 Hypothetical sugar kinase; ribonuclease H-like mot 96.81
2ch5_A347 NAGK protein; transferase, N-acetylglucosamine, gl 96.76
3l0q_A554 Xylulose kinase; xlylulose kinase, SGX, PSI, struc 96.68
2itm_A484 Xylulose kinase, xylulokinase; ATPase, FGGY kinase 96.65
2zf5_O497 Glycerol kinase; hyperthermophilic archaeon, ATP-b 96.56
4bc3_A538 Xylulose kinase; transferase, glucuronate xyluloki 96.56
3ll3_A504 Gluconate kinase; xylulose kinase, nysgx, ATP, ADP 96.49
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 96.45
3hz6_A511 Xylulokinase; xylulose, structural genomic, chromo 96.4
2e2o_A299 Hexokinase; acetate and sugar kinases, HSP70, acti 96.34
2gup_A292 ROK family protein; sugar kinase, streptococcus pn 96.33
3g25_A501 Glycerol kinase; IDP00743, ATP-binding, glycerol m 96.22
3jvp_A572 Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su 96.2
2qm1_A326 Glucokinase; alpha-beta structure, putative helix- 96.14
3ezw_A526 Glycerol kinase; glycerol metabolism, allosteric r 96.12
4e1j_A520 Glycerol kinase; structural genomics, PSI-biology, 96.11
2dpn_A495 Glycerol kinase; thermus thermophilus HB8, structu 96.1
3ifr_A508 Carbohydrate kinase, FGGY; xylulose kinase, SGX, s 96.08
2p3r_A510 Glycerol kinase; glycerol metabolism, allosteric r 96.07
4htl_A297 Beta-glucoside kinase; structural genomics, sugar 96.06
3h3n_X506 Glycerol kinase; ATP-binding, glycerol metabolism, 96.04
3zyy_X631 Iron-sulfur cluster binding protein; iron-sulfur-b 96.03
3vov_A302 Glucokinase, hexokinase; ROK, sugar kinase, transf 95.86
2d4w_A504 Glycerol kinase; alpha and beta protein, ribonucle 95.83
2ap1_A327 Putative regulator protein; zinc binding protein, 95.81
3cer_A343 Possible exopolyphosphatase-like protein; NESG, BL 95.78
2w40_A503 Glycerol kinase, putative; closed conformation, ma 95.69
1z6r_A406 MLC protein; transcriptional repressor, ROK family 95.62
2uyt_A489 Rhamnulokinase; rhamnose degradation, IN-LINE phos 95.29
2hoe_A380 N-acetylglucosamine kinase; TM1224, structural gen 95.26
1z05_A429 Transcriptional regulator, ROK family; structural 94.86
1zc6_A305 Probable N-acetylglucosamine kinase; NESG, Q7NU07_ 94.67
2ivn_A330 O-sialoglycoprotein endopeptidase; UP1 keops compl 94.61
1u6z_A513 Exopolyphosphatase; alpha/beta protein, askha (ace 94.4
3h6e_A482 Carbohydrate kinase, FGGY; novosphingobium aromati 93.53
3hi0_A508 Putative exopolyphosphatase; 17739545, structural 93.06
3qbx_A371 Anhydro-N-acetylmuramic acid kinase; acetate and s 90.96
3en9_A540 Glycoprotease, O-sialoglycoprotein endopeptidase/p 90.68
3ven_A576 O-carbamoyltransferase TOBZ; antibiotic biosynthes 90.23
3cqy_A370 Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1 88.36
3bex_A249 Type III pantothenate kinase; actin-like fold, ATP 87.76
3eno_A334 Putative O-sialoglycoprotein endopeptidase; hydrol 85.79
3ttc_A657 HYPF, transcriptional regulatory protein; Zn finge 84.36
3vth_A761 Hydrogenase maturation factor; carbamoyltransfer, 83.78
3o8m_A485 Hexokinase; rnaseh-like fold, glycolysis, glucose 82.58
4g9i_A772 Hydrogenase maturation protein HYPF; zinc finger, 81.07
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
Probab=100.00  E-value=2.3e-94  Score=772.98  Aligned_cols=528  Identities=76%  Similarity=1.129  Sum_probs=500.8

Q ss_pred             CCCEEEEEcCccceeeeEE---------------ecceEEEecCCceEecHHHHhhHhhCCCchhhhhhHhhCCCCCChh
Q 009246            6 EGPAIGIDLGTTYSCVGVW---------------TTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDAS   70 (539)
Q Consensus         6 ~~~vvGID~GTt~s~va~~---------------~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~   70 (539)
                      ++.+||||||||||+||++               .+||+|+|.++++++|..|+++...+|.++++++||++|++++++.
T Consensus         3 m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~   82 (554)
T 1yuw_A            3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAV   82 (554)
T ss_dssp             SCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSH
T ss_pred             CCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHH
Confidence            5568999999999999998               6899999999999999999999999999999999999999999999


Q ss_pred             hhccccccCeEEEecCCCCceEEEEEcCCceEEeHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHH
Q 009246           71 VQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDA  150 (539)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A  150 (539)
                      ++..++.+||++.. .++.+.+.+.+.+..+.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|
T Consensus        83 v~~~~~~~p~~v~~-~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A  161 (554)
T 1yuw_A           83 VQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDA  161 (554)
T ss_dssp             HHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred             HHHHhhcCCeEEEe-cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            99999999999984 47788888888888889999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCceeEeechhHHHHHhcccccccCCCCCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHHH
Q 009246          151 GVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVN  230 (539)
Q Consensus       151 a~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~  230 (539)
                      ++.||++++++++||+|||++|+.....  ..+.++||||+||||||++++++.++.++++++.++..+||++||+.|.+
T Consensus       162 ~~~AGl~~~~li~EP~AAAlay~~~~~~--~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~  239 (554)
T 1yuw_A          162 GTIAGLNVLRIINEPTAAAIAYGLDKKV--GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVN  239 (554)
T ss_dssp             HHTTTCEEEEEEEHHHHHHHHTTCSTTC--SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred             HHHcCCCeEEEeCcHHHHHHHHHhhccC--CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHH
Confidence            9999999999999999999999876542  24688999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhcCCCceEEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHH
Q 009246          231 HFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEK  310 (539)
Q Consensus       231 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~Ls~~~~~~i~i~~~~~g~d~~~~itr~~~e~~~~~~~~~i~~~i~~  310 (539)
                      ++.++|+++++.++..+++.+.+|+.+||++|+.||...+..+.++.+++|.++...|+|++|+++++|+++++.++|++
T Consensus       240 ~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~  319 (554)
T 1yuw_A          240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEK  319 (554)
T ss_dssp             HHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHH
T ss_pred             HHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999888889999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             HHHHcCCCcCCcceEEEeCCCcCcHHHHHHHHhhhCCccccccCCCchhhHhHHHHHHHHHhCCCCccccceeeeecccc
Q 009246          311 CLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPL  390 (539)
Q Consensus       311 ~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~~~~~~~~~~~~~~d~~~~  390 (539)
                      +|+++++...+|+.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.+++...++.+++.+.|++|+
T Consensus       320 ~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~  399 (554)
T 1yuw_A          320 ALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPL  399 (554)
T ss_dssp             HHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSS
T ss_pred             HHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeee
Confidence            99999999999999999999999999999999999778888889999999999999999998654455678899999999


Q ss_pred             ccceeeecCeEEEEEeCCCCcCceeEEEeeeccCCCCcEEEEEEecCcccccCCcceeEEEEeCCCCCCCCcCEEEEEEE
Q 009246          391 SLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFD  470 (539)
Q Consensus       391 s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~~~q~~~~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~~~~~i~v~~~  470 (539)
                      +||+++.++.+.+||+||+++|++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+|++++|.++|+++|+
T Consensus       400 slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~  479 (554)
T 1yuw_A          400 SLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFD  479 (554)
T ss_dssp             CEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEE
T ss_pred             EEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCeeEEEEEEEcCCCceeeEEcCCChhhhHHHHHHHHhcCCcccHHHHHhhhhhcCCCCCCCCC
Q 009246          471 IDANGILNVSAEDKTTAKRTRSQSPTTRVDCQRMKLRRWFKRPRSTRLKMRSTRRRSRPRMPWKTM  536 (539)
Q Consensus       471 ~d~~g~l~v~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  536 (539)
                      +|.||+|+|++.+..||++.+++++.....++++++++|.+...++..+++.++++.++||+||++
T Consensus       480 id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~  545 (554)
T 1yuw_A          480 IDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESY  545 (554)
T ss_dssp             ECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSC
T ss_pred             EccCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999988777899999999999999999999999999999999986
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Back     alignment and structure
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Back     alignment and structure
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} Back     alignment and structure
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A Back     alignment and structure
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} Back     alignment and structure
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A Back     alignment and structure
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Back     alignment and structure
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 Back     alignment and structure
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Back     alignment and structure
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Back     alignment and structure
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Back     alignment and structure
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} Back     alignment and structure
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A Back     alignment and structure
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A* Back     alignment and structure
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Back     alignment and structure
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* Back     alignment and structure
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} Back     alignment and structure
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} Back     alignment and structure
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* Back     alignment and structure
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} Back     alignment and structure
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* Back     alignment and structure
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* Back     alignment and structure
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Back     alignment and structure
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} Back     alignment and structure
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* Back     alignment and structure
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Back     alignment and structure
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* Back     alignment and structure
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* Back     alignment and structure
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* Back     alignment and structure
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} Back     alignment and structure
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* Back     alignment and structure
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} Back     alignment and structure
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} Back     alignment and structure
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes} Back     alignment and structure
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O Back     alignment and structure
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans} Back     alignment and structure
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus} Back     alignment and structure
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} Back     alignment and structure
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} Back     alignment and structure
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* Back     alignment and structure
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A Back     alignment and structure
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* Back     alignment and structure
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Back     alignment and structure
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Back     alignment and structure
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5 Back     alignment and structure
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* Back     alignment and structure
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* Back     alignment and structure
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str} Back     alignment and structure
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A* Back     alignment and structure
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Back     alignment and structure
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A* Back     alignment and structure
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis} Back     alignment and structure
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A Back     alignment and structure
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} Back     alignment and structure
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A Back     alignment and structure
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A Back     alignment and structure
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X* Back     alignment and structure
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 539
d1bupa2193 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATP 3e-91
d1dkgd2198 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATP 3e-88
d1bupa1185 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPas 3e-75
d1dkgd1183 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPas 8e-70
d1yuwa1159 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus 4e-52
d1dkza2118 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxI 5e-47
d1u00a2115 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc6 3e-41
d1jcea2196 c.55.1.1 (A:141-336) Prokaryotic actin homolog Mre 5e-32
d1jcea1137 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB 7e-28
d2zgya2163 c.55.1.1 (A:158-320) Plasmid segregation protein P 2e-26
d2fsja1161 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 1e-21
d1e4ft2191 c.55.1.1 (T:200-390) Cell division protein FtsA {T 2e-05
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 193 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  275 bits (705), Expect = 3e-91
 Identities = 160/191 (83%), Positives = 179/191 (93%)

Query: 182 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNK 241
            E+NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNRMVNHF+ EFKRK+K
Sbjct: 3   AERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHK 62

Query: 242 KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLF 301
           KDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFY++ITRARFEELN DLF
Sbjct: 63  KDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLF 122

Query: 302 RKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEAVA 361
           R  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDEAVA
Sbjct: 123 RGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVA 182

Query: 362 YGAAVQAAILS 372
           YGAAVQAAILS
Sbjct: 183 YGAAVQAAILS 193
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 198 Back     information, alignment and structure
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 185 Back     information, alignment and structure
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 183 Back     information, alignment and structure
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 159 Back     information, alignment and structure
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} Length = 118 Back     information, alignment and structure
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 196 Back     information, alignment and structure
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 137 Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Length = 163 Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 161 Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Length = 191 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query539
d1bupa2193 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 100.0
d1dkgd2198 Heat shock protein 70kDa, ATPase fragment {Escheri 100.0
d1bupa1185 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 100.0
d1dkgd1183 Heat shock protein 70kDa, ATPase fragment {Escheri 100.0
d1yuwa1159 DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} 99.97
d1dkza2118 DnaK {Escherichia coli [TaxId: 562]} 99.94
d1u00a2115 Chaperone protein hscA (Hsc66) {Escherichia coli [ 99.93
d1jcea1137 Prokaryotic actin homolog MreB {Thermotoga maritim 99.86
d1jcea2196 Prokaryotic actin homolog MreB {Thermotoga maritim 99.86
d2zgya2163 Plasmid segregation protein ParM {Escherichia coli 99.58
d1e4ft2191 Cell division protein FtsA {Thermotoga maritima [T 99.51
d2fsja1161 Hypothetical protein Ta0583 {Archaeon Thermoplasma 99.36
d1huxa_259 Hydroxyglutaryl-CoA dehydratase component A {Acida 98.75
d1k8ka2258 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 98.21
d2fxua2225 Actin {Cow (Bos taurus) [TaxId: 9913]} 98.19
d1k8kb1190 Actin-related protein 2, Arp2 {Cow (Bos taurus) [T 97.91
d1nbwa3202 ATPase domain of the glycerol dehydratase reactiva 97.8
d2d0oa3203 Diol dehydratase-reactivating factor large subunit 97.77
d2fxua1140 Actin {Cow (Bos taurus) [TaxId: 9913]} 96.48
d1r59o2235 Glycerol kinase {Enterococcus casseliflavus [TaxId 96.43
d2i7na2212 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 96.26
d1k8ka1158 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 96.21
d2fsja2164 Hypothetical protein Ta0583 {Archaeon Thermoplasma 96.08
d2p3ra2247 Glycerol kinase {Escherichia coli [TaxId: 562]} 96.06
d1zc6a1114 Probable N-acetylglucosamine kinase CV2896 {Chromo 95.24
d2ewsa1267 Type II pantothenate kinase, CoaW {Staphylococcus 93.75
d1sz2a1319 Glucokinase Glk {Escherichia coli [TaxId: 562]} 93.56
d1e4ft1193 Cell division protein FtsA {Thermotoga maritima [T 92.53
d1t6ca2180 Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 91.46
d2zgya1157 Plasmid segregation protein ParM {Escherichia coli 90.85
d1u6za3177 Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 88.96
d2hoea2169 N-acetylglucosamine kinase {Thermotoga maritima [T 88.63
d2gupa2175 Hypothetical protein SP2142 {Streptococcus pneumon 85.88
d2aa4a2170 N-acetylmannosamine kinase NanK {Escherichia coli 85.73
d2ap1a1186 Putative regulator protein YcfX {Salmonella typhim 85.38
d2ch5a2117 N-acetylglucosamine kinase, NAGK {Human (Homo sapi 85.16
d1z05a2197 Transcriptional regulator VC2007 {Vibrio cholerae 84.51
d2p3ra1252 Glycerol kinase {Escherichia coli [TaxId: 562]} 81.45
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.7e-39  Score=297.58  Aligned_cols=191  Identities=84%  Similarity=1.263  Sum_probs=184.0

Q ss_pred             CCeEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHH
Q 009246          182 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERA  261 (539)
Q Consensus       182 ~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~  261 (539)
                      .+++|||||+||||+|+|++++.++.++++++.++..+||.+||++|++|+.++|.++++.++..+++.+.+|+.+||++
T Consensus         3 ~e~~VlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~   82 (193)
T d1bupa2           3 AERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERA   82 (193)
T ss_dssp             SCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEEeCCCeEEEEEEEEeCCEEEEEEecCCCCcchhHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCceEEEEEecccCCeeeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEeCCCcCcHHHHHHH
Q 009246          262 KRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLL  341 (539)
Q Consensus       262 K~~Ls~~~~~~i~i~~~~~g~d~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l  341 (539)
                      |+.||.+.++.+.++.+..+.++..+|||++|+++++|+++++.++++++|+++++.+.+|+.|+|+||+|++|+|++.|
T Consensus        83 K~~ls~~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGG~sr~p~v~~~i  162 (193)
T d1bupa2          83 KRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLL  162 (193)
T ss_dssp             HHHHTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHH
T ss_pred             hhccCCCceEEEEEecccCCCccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHH
Confidence            99999999999999998999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhCCccccccCCCchhhHhHHHHHHHHHh
Q 009246          342 QDFFNGKELCKNINPDEAVAYGAAVQAAILS  372 (539)
Q Consensus       342 ~~~f~~~~v~~~~~p~~aVa~GAa~~a~~~~  372 (539)
                      +++|++.++..+.||++|||+|||++|+.++
T Consensus       163 ~~~f~~~~i~~~~~p~~aVa~GaA~~aa~ls  193 (193)
T d1bupa2         163 QDFFNGKELNKSINPDEAVAYGAAVQAAILS  193 (193)
T ss_dssp             HHHTTTCCCBCSSCGGGHHHHHHHHHHHHHC
T ss_pred             HHHcCCCCCCCCCChHHHHHHHHHHHHHhhC
Confidence            9999888888889999999999999999875
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2d0oa3 c.55.1.6 (A:404-606) Diol dehydratase-reactivating factor large subunit DdrA {Klebsiella oxytoca [TaxId: 571]} Back     information, alignment and structure
>d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Back     information, alignment and structure
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2fsja2 c.55.1.12 (A:1-164) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} Back     information, alignment and structure
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1sz2a1 c.55.1.7 (A:3-321) Glucokinase Glk {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e4ft1 c.55.1.1 (T:7-199) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2zgya1 c.55.1.1 (A:1-157) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2gupa2 c.55.1.10 (A:115-289) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2aa4a2 c.55.1.10 (A:120-289) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ap1a1 c.55.1.10 (A:118-303) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z05a2 c.55.1.10 (A:209-405) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure