Citrus Sinensis ID: 009348

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------

MQLHFSPSMRSITILSSNSNNGGFIDLMKIKVAARHLSYRTLFHTILILAFLLPFVFILTALVTLEGVDKCSSFDCLGRRLGPRLLGRVDDSERLVKDFYKVLNQVDTEEIPDGLKLPDSFSELVSEMKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILET

ccEEEcccccEEEEEcccccccccccHHHHEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHccHHHHccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHcHHHHHHccccccccccccccccccccccEEEEEEcccccHHHHHHHHHHHHccccccEEEEEEEccccHHHHHHHHHcccccccEEEEEEcccccccccccHHHHHHHHHcccccccccccccccccccccccHHHHHHccccccccccHHHHHHHHHccccccccEEEEEEccEEEccccHHHHHccccccEEEEEEccccccHHHHHHHHHccccccHHHHHccccccccccccccHHccHHHHHHHcHHHHHHHHHHHHHcccccccccccccHHHHHcccccccccccccccccccccccccccccccEEEEEcccccccccccccccHHHHHHHHccccHHHHHHccccc

ccEEEccccEEEEEEccccccccHHHHHEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHcccccccccHHcccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccHHHccccccccccccccccEEEEEEEccHHHHHHHHHHHHHHHccccccEEEEEEEcccccHHHHHHHHcccccccEEEEEcHHHcHHccccccHHHHHHccHHHHEEEEcccccccccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHcHcccEEEEEcccEEEEEccHHHHcccccccEEcccEccccccccccccHHHHccccccHHHHccccccHHHHHcccEEEEHHHHHHHcHHHHHHHHHHHHHccccEEEEcccccccEEEEcccccccccccEEccccccccccHHHHcccEEEEEccccccHHHEcccccccHHHHHcccccHHHHHcccccc

mqlhfspsmrsitilssnsnnggfiDLMKIKVAARHLSYRTLFHTILILAFLLPFVFILTALVTLegvdkcssfdclgrrlgprllgrvddseRLVKDFYKVLNQvdteeipdglklpdSFSELVSEMKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKhfaassipkgihclslrltdeyssnaharrqlpspellpllsdnsyhhfILSTDNILAASVVVTSAvqsslkpeKIVFHVITDKKTYAGMHSwfalnpvspaiVEVKgihqfdwltrenvpvleavenhdgirnyyhgnhvaganlsdttprtFASKLQARSPKYISLLNHLRiyipelfphldkvvfldddiviqrdlsplweidlggkvngavetcrgedewvmskrfrnyfnfshpliakhldpeecawaygMNIFDLRAWRKTNIRETYHSWLKENLKSNLtmwklgtlppaliafkghvhpidpswhllglgyqnktsieSVKKAAVIHYngqskpwlqiGFEHLRPFWAKYVNYSNDFVRNCHILET

mqlhfspsMRSITILSSNSNNGGFIDLMKIKVAARHLSYRTLFHTILILAFLLPFVFILTALVTLEGVDKcssfdclgrrlgprllgrvddserLVKDFYKVLnqvdteeipdglkLPDSFSELVSEMKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSavqsslkpekiVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLsplweidlggkvngavETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILET

MQLHFSPSMRSITILSSNSNNGGFIDLMKIKVAARHLSYRTLFHTILILAFLLPFVFILTALVTLEGVDKCSSFDClgrrlgprllgrVDDSERLVKDFYKVLNQVDTEEIPDGLKLPDSFSELVSEMKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQlpspellpllsDNSYHHFILSTDNILaasvvvtsavqssLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILET

********************NGGFIDLMKIKVAARHLSYRTLFHTILILAFLLPFVFILTALVTLEGVDKCSSFDCLGRRLGPRLLGRVDDSERLVKDFYKVLNQVDTEEIPDGLK**************NQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEY**************LLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHIL**

*****S*SMRSI*************DLMKIKVAARHLSYRTLFHTILILAFLLPFVFILTALVTLEGVDKCSSFDCLGRRLGPRLL**********************************FSELVSEMKNNQYDAKTFGFMLRAMM***************MNKHFAASSIPKGIHCLSLRLTDEY********************DNSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHIL**

*********RSITILSSNSNNGGFIDLMKIKVAARHLSYRTLFHTILILAFLLPFVFILTALVTLEGVDKCSSFDCLGRRLGPRLLGRVDDSERLVKDFYKVLNQVDTEEIPDGLKLPDSFSELVSEMKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILET

*QLHFSPSMRSITILSSNSNNGGFIDLMKIKVAARHLSYRTLFHTILILAFLLPFVFILTALVTLEGVDKCSSFDCLGRRLGPRLLGRVDDSERLVKDFYKVLNQVDTEEIPDGLKLPDSFSELVSEMKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHV*GANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHIL**

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		537	2.2.26 [Sep-21-2011]
Q8GWT1		532	Probable galacturonosyltr	yes	no	0.990	1.0	0.884	0.0
Q0WV13		533	Probable galacturonosyltr	no	no	0.990	0.998	0.878	0.0
Q9FH36		535	Probable galacturonosyltr	no	no	0.986	0.990	0.544	1e-173
Q8L4B0		540	Probable galacturonosyltr	no	no	0.905	0.9	0.461	1e-125
Q9LE59		673	Polygalacturonate 4-alpha	no	no	0.739	0.589	0.426	1e-104
Q93ZX7		616	Probable galacturonosyltr	no	no	0.783	0.683	0.425	1e-103
Q9LSG3		559	Galacturonosyltransferase	no	no	0.763	0.733	0.427	1e-97
Q0WQD2		680	Probable galacturonosyltr	no	no	0.741	0.585	0.414	3e-95
Q949Q1		537	Probable galacturonosyltr	no	no	0.735	0.735	0.385	5e-94
Q9SKT6		536	Probable galacturonosyltr	no	no	0.718	0.720	0.430	1e-90

>sp\|Q8GWT1\|GAUTE_ARATH Probable galacturonosyltransferase 14 OS=Arabidopsis thaliana GN=GAUT14 PE=2 SV=1	Back alignment and function desciption

 Score =  984 bits (2545), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/536 (88%), Positives = 515/536 (96%), Gaps = 4/536 (0%)

Query: 1   MQLHFSPSMRSITILSSNSNNGGFIDLMKIKVAARHLSYRTLFHTILILAFLLPFVFILT 60
           MQLH SPSMRSITI SSN     FIDLMKIKVAARH+SYRTLFHTILILAFLLPFVFILT
Sbjct: 1   MQLHISPSMRSITISSSNE----FIDLMKIKVAARHISYRTLFHTILILAFLLPFVFILT 56

Query: 61  ALVTLEGVDKCSSFDCLGRRLGPRLLGRVDDSERLVKDFYKVLNQVDTEEIPDGLKLPDS 120
           A+VTLEGV+KCSS DCLGRR+GPRLLGRVDDSERL +DFYK+LN+V T+EIPDGLKLP+S
Sbjct: 57  AVVTLEGVNKCSSIDCLGRRIGPRLLGRVDDSERLARDFYKILNEVSTQEIPDGLKLPNS 116

Query: 121 FSELVSEMKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSL 180
           FS+LVS+MKNN YDAKTF  +LRAMMEKFER++RESKFAELMNKHFAASSIPKGIHCLSL
Sbjct: 117 FSQLVSDMKNNHYDAKTFALVLRAMMEKFERDMRESKFAELMNKHFAASSIPKGIHCLSL 176

Query: 181 RLTDEYSSNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEKI 240
           RLTDEYSSNAHARRQLPSPE LP+LSDN+YHHFILSTDNILAASVVV+SAVQSS KPEKI
Sbjct: 177 RLTDEYSSNAHARRQLPSPEFLPVLSDNAYHHFILSTDNILAASVVVSSAVQSSSKPEKI 236

Query: 241 VFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYY 300
           VFH+ITDKKTYAGMHSWFALN V+PAIVEVKG+HQFDWLTRENVPVLEAVE+H+G+R+YY
Sbjct: 237 VFHIITDKKTYAGMHSWFALNSVAPAIVEVKGVHQFDWLTRENVPVLEAVESHNGVRDYY 296

Query: 301 HGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQ 360
           HGNHVAGANL++TTPRTFASKLQ+RSPKYISLLNHLRIYIPELFP+LDKVVFLDDDIV+Q
Sbjct: 297 HGNHVAGANLTETTPRTFASKLQSRSPKYISLLNHLRIYIPELFPNLDKVVFLDDDIVVQ 356

Query: 361 RDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGM 420
            DL+PLW++DLGGKVNGAVETCRGEDEWVMSKR RNYFNFSHPLIAKHLDPEECAWAYGM
Sbjct: 357 GDLTPLWDVDLGGKVNGAVETCRGEDEWVMSKRLRNYFNFSHPLIAKHLDPEECAWAYGM 416

Query: 421 NIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGL 480
           NIFDL+AWRKTNIRETYHSWL+ENLKSNLTMWKLGTLPPALIAFKGHVH ID SWH+LGL
Sbjct: 417 NIFDLQAWRKTNIRETYHSWLRENLKSNLTMWKLGTLPPALIAFKGHVHIIDSSWHMLGL 476

Query: 481 GYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILE 536
           GYQ+KT+IE+VKKAAVIHYNGQSKPWL+IGFEHLRPFW KYVNYSNDF++NCHILE
Sbjct: 477 GYQSKTNIENVKKAAVIHYNGQSKPWLEIGFEHLRPFWTKYVNYSNDFIKNCHILE 532

May be involved in pectin and/or xylans biosynthesis in cell walls.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp\|Q0WV13\|GAUTD_ARATH Probable galacturonosyltransferase 13 OS=Arabidopsis thaliana GN=GAUT13 PE=2 SV=1	Back alignment and function description

>sp\|Q9FH36\|GAUTC_ARATH Probable galacturonosyltransferase 12 OS=Arabidopsis thaliana GN=GAUT12 PE=2 SV=1	Back alignment and function description

>sp\|Q8L4B0\|GAUTF_ARATH Probable galacturonosyltransferase 15 OS=Arabidopsis thaliana GN=GAUT15 PE=2 SV=1	Back alignment and function description

>sp\|Q9LE59\|GAUT1_ARATH Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana GN=GAUT1 PE=1 SV=1	Back alignment and function description

>sp\|Q93ZX7\|GAUT4_ARATH Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana GN=GAUT4 PE=2 SV=1	Back alignment and function description

>sp\|Q9LSG3\|GAUT8_ARATH Galacturonosyltransferase 8 OS=Arabidopsis thaliana GN=GAUT8 PE=1 SV=1	Back alignment and function description

>sp\|Q0WQD2\|GAUT3_ARATH Probable galacturonosyltransferase 3 OS=Arabidopsis thaliana GN=GAUT3 PE=2 SV=2	Back alignment and function description

>sp\|Q949Q1\|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1	Back alignment and function description

>sp\|Q9SKT6\|GAUTA_ARATH Probable galacturonosyltransferase 10 OS=Arabidopsis thaliana GN=GAUT10 PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		537
225452954		534	PREDICTED: probable galacturonosyltransf	0.992	0.998	0.910	0.0
224141469		528	glycosyltransferase [Populus trichocarpa	0.959	0.975	0.916	0.0
224077712		528	glycosyltransferase, CAZy family GT8 [Po	0.981	0.998	0.894	0.0
356526479		538	PREDICTED: probable galacturonosyltransf	1.0	0.998	0.897	0.0
30685369		532	alpha-1,4-galacturonosyltransferase [Ara	0.990	1.0	0.884	0.0
255570238		540	Glycosyltransferase QUASIMODO1, putative	0.998	0.992	0.902	0.0
186509640		532	alpha-1,4-galacturonosyltransferase [Ara	0.990	1.0	0.880	0.0
356568714		539	PREDICTED: probable galacturonosyltransf	1.0	0.996	0.892	0.0
297832830		533	GAUT13 [Arabidopsis lyrata subsp. lyrata	0.990	0.998	0.882	0.0
30678270		533	alpha-1,4-galacturonosyltransferase [Ara	0.990	0.998	0.878	0.0

>gi\|225452954\|ref\|XP_002284273.1\| PREDICTED: probable galacturonosyltransferase 13-like [Vitis vinifera]	Back alignment and taxonomy information

 Score = 1006 bits (2601), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/538 (91%), Positives = 522/538 (97%), Gaps = 5/538 (0%)

Query: 1   MQLHFSPSMRSITILSSNSNNGGFIDLMKIKVAARHLSYRTLFHTILILAFLLPFVFILT 60
           MQLHFSPSMRSITI SSN    GFIDLMKIKVAARH+SYRTLFHTILILAFLLPFVFILT
Sbjct: 1   MQLHFSPSMRSITISSSN----GFIDLMKIKVAARHISYRTLFHTILILAFLLPFVFILT 56

Query: 61  ALVTLEGVDKCSSFDCLGRRLGPRLLGRVDDS-ERLVKDFYKVLNQVDTEEIPDGLKLPD 119
           A+VTLEGV+KCSSFDCLGRRLGPRLLGR DDS +RLV+DFYK+LNQV+TEE+PDGLKLPD
Sbjct: 57  AVVTLEGVNKCSSFDCLGRRLGPRLLGRADDSGQRLVRDFYKILNQVNTEELPDGLKLPD 116

Query: 120 SFSELVSEMKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLS 179
           +FS+LVSEMKN QYDAKTF FMLRAMMEK ER+IRESKFAELMNKHFAAS+IPKGIHCLS
Sbjct: 117 TFSQLVSEMKNKQYDAKTFAFMLRAMMEKLERDIRESKFAELMNKHFAASAIPKGIHCLS 176

Query: 180 LRLTDEYSSNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEK 239
           LRLTDEYSSNAHAR+QLPSPELLPLLSDNSYHH I+STDNILAASVVV SAVQSSL+PEK
Sbjct: 177 LRLTDEYSSNAHARKQLPSPELLPLLSDNSYHHMIVSTDNILAASVVVNSAVQSSLQPEK 236

Query: 240 IVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNY 299
           IVFHVITDKKTYAGMHSWFALNPVSPAIVEVKG+HQFDWLTRENVPVL+AVE+H+GIR+Y
Sbjct: 237 IVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGVHQFDWLTRENVPVLDAVESHNGIRSY 296

Query: 300 YHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVI 359
           YHGNHVAGANLS+TTPR FASKLQARSPKYISLLNHLRIYIPELFP+L+KVVFLDDD+VI
Sbjct: 297 YHGNHVAGANLSETTPRRFASKLQARSPKYISLLNHLRIYIPELFPNLNKVVFLDDDVVI 356

Query: 360 QRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYG 419
           QRDLSPLWEIDL GKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAK+L+P+ECAWAYG
Sbjct: 357 QRDLSPLWEIDLEGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKNLNPDECAWAYG 416

Query: 420 MNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLG 479
           MNIFDL AWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGH+HPIDPSWH+LG
Sbjct: 417 MNIFDLSAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHIHPIDPSWHMLG 476

Query: 480 LGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILET 537
           LGYQNKT+I+SVKKAAVIHYNGQSKPWLQIGFEHLRPFW KYVNYSNDFVRNCHILE+
Sbjct: 477 LGYQNKTNIDSVKKAAVIHYNGQSKPWLQIGFEHLRPFWTKYVNYSNDFVRNCHILES 534

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224141469\|ref\|XP_002324094.1\| glycosyltransferase [Populus trichocarpa] gi\|222867096\|gb\|EEF04227.1\| glycosyltransferase [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224077712\|ref\|XP_002305374.1\| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] gi\|222848338\|gb\|EEE85885.1\| glycosyltransferase, CAZy family GT8 [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356526479\|ref\|XP_003531845.1\| PREDICTED: probable galacturonosyltransferase 14-like [Glycine max]	Back alignment and taxonomy information

>gi\|30685369\|ref\|NP_197051.2\| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana] gi\|75151049\|sp\|Q8GWT1.1\|GAUTE_ARATH RecName: Full=Probable galacturonosyltransferase 14 gi\|26452322\|dbj\|BAC43247.1\| unknown protein [Arabidopsis thaliana] gi\|29028910\|gb\|AAO64834.1\| At5g15470 [Arabidopsis thaliana] gi\|332004782\|gb\|AED92165.1\| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|255570238\|ref\|XP_002526079.1\| Glycosyltransferase QUASIMODO1, putative [Ricinus communis] gi\|223534576\|gb\|EEF36273.1\| Glycosyltransferase QUASIMODO1, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|186509640\|ref\|NP_001118545.1\| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana] gi\|332640078\|gb\|AEE73599.1\| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|356568714\|ref\|XP_003552555.1\| PREDICTED: probable galacturonosyltransferase 13-like [Glycine max]	Back alignment and taxonomy information

>gi\|297832830\|ref\|XP_002884297.1\| GAUT13 [Arabidopsis lyrata subsp. lyrata] gi\|297330137\|gb\|EFH60556.1\| GAUT13 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|30678270\|ref\|NP_186753.2\| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana] gi\|122242646\|sp\|Q0WV13.1\|GAUTD_ARATH RecName: Full=Probable galacturonosyltransferase 13 gi\|110742217\|dbj\|BAE99035.1\| hypothetical protein [Arabidopsis thaliana] gi\|126352278\|gb\|ABO09884.1\| At3g01040 [Arabidopsis thaliana] gi\|332640077\|gb\|AEE73598.1\| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		537
TAIR\|locus:2180947		532	GAUT14 "galacturonosyltransfer	0.990	1.0	0.824	1.4e-247
TAIR\|locus:2102082		533	GAUT13 "galacturonosyltransfer	0.990	0.998	0.817	1.8e-245
TAIR\|locus:2157543		535	GAUT12 "galacturonosyltransfer	0.985	0.988	0.506	1.4e-149
TAIR\|locus:2099049		540	GAUT15 "galacturonosyltransfer	0.929	0.924	0.432	1.6e-111
TAIR\|locus:2121753		680	GAUT3 "galacturonosyltransfera	0.785	0.620	0.378	8e-89
TAIR\|locus:2051426		536	GAUT10 "galacturonosyltransfer	0.724	0.725	0.416	8.6e-88
TAIR\|locus:2090210		559	QUA1 "QUASIMODO 1" [Arabidopsi	0.653	0.627	0.444	1e-84
TAIR\|locus:2039934		528	GAUT2 "galacturonosyltransfera	0.242	0.246	0.484	2.8e-78
TAIR\|locus:2074572		561	GAUT9 "galacturonosyltransfera	0.581	0.556	0.426	7.3e-75
TAIR\|locus:504955915		610	LGT5 "los glycosyltransferase	0.389	0.342	0.390	5.3e-72

TAIR\|locus:2180947 GAUT14 "galacturonosyltransferase 14" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2385 (844.6 bits), Expect = 1.4e-247, P = 1.4e-247
 Identities = 442/536 (82%), Positives = 480/536 (89%)

Query:     1 MQLHFSPSMRSITILSSNSNNGGFIDLMKIKVAARHLSYRTLFHTILILAFLLPFVFILT 60
             MQLH SPSMRSITI SSN     FIDLMKIKVAARH+SYRTLFHTILILAFLLPFVFILT
Sbjct:     1 MQLHISPSMRSITISSSNE----FIDLMKIKVAARHISYRTLFHTILILAFLLPFVFILT 56

Query:    61 ALVTLEGVDKCSSFDCXXXXXXXXXXXXVDDSERLVKDFYKVLNQVDTEEIPDGLKLPDS 120
             A+VTLEGV+KCSS DC            VDDSERL +DFYK+LN+V T+EIPDGLKLP+S
Sbjct:    57 AVVTLEGVNKCSSIDCLGRRIGPRLLGRVDDSERLARDFYKILNEVSTQEIPDGLKLPNS 116

Query:   121 FSELVSEMKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSL 180
             FS+LVS+MKNN YDAKTF  +LRAMMEKFER++RESKFAELMNKHFAASSIPKGIHCLSL
Sbjct:   117 FSQLVSDMKNNHYDAKTFALVLRAMMEKFERDMRESKFAELMNKHFAASSIPKGIHCLSL 176

Query:   181 RLTDEYSSNAHARRQXXXXXXXXXXXDNSYHHFILSTDNILXXXXXXXXXXXXXLKPEKI 240
             RLTDEYSSNAHARRQ           DN+YHHFILSTDNIL              KPEKI
Sbjct:   177 RLTDEYSSNAHARRQLPSPEFLPVLSDNAYHHFILSTDNILAASVVVSSAVQSSSKPEKI 236

Query:   241 VFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYY 300
             VFH+ITDKKTYAGMHSWFALN V+PAIVEVKG+HQFDWLTRENVPVLEAVE+H+G+R+YY
Sbjct:   237 VFHIITDKKTYAGMHSWFALNSVAPAIVEVKGVHQFDWLTRENVPVLEAVESHNGVRDYY 296

Query:   301 HGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQ 360
             HGNHVAGANL++TTPRTFASKLQ+RSPKYISLLNHLRIYIPELFP+LDKVVFLDDDIV+Q
Sbjct:   297 HGNHVAGANLTETTPRTFASKLQSRSPKYISLLNHLRIYIPELFPNLDKVVFLDDDIVVQ 356

Query:   361 RDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGM 420
              DL+PLW++DLGGKVNGAVETCRGEDEWVMSKR RNYFNFSHPLIAKHLDPEECAWAYGM
Sbjct:   357 GDLTPLWDVDLGGKVNGAVETCRGEDEWVMSKRLRNYFNFSHPLIAKHLDPEECAWAYGM 416

Query:   421 NIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGL 480
             NIFDL+AWRKTNIRETYHSWL+ENLKSNLTMWKLGTLPPALIAFKGHVH ID SWH+LGL
Sbjct:   417 NIFDLQAWRKTNIRETYHSWLRENLKSNLTMWKLGTLPPALIAFKGHVHIIDSSWHMLGL 476

Query:   481 GYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILE 536
             GYQ+KT+IE+VKKAAVIHYNGQSKPWL+IGFEHLRPFW KYVNYSNDF++NCHILE
Sbjct:   477 GYQSKTNIENVKKAAVIHYNGQSKPWLEIGFEHLRPFWTKYVNYSNDFIKNCHILE 532

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0016051 "carbohydrate biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA;ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0047262 "polygalacturonate 4-alpha-galacturonosyltransferase activity" evidence=ISS

TAIR\|locus:2102082 GAUT13 "galacturonosyltransferase 13" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2157543 GAUT12 "galacturonosyltransferase 12" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2099049 GAUT15 "galacturonosyltransferase 15" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2121753 GAUT3 "galacturonosyltransferase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2051426 GAUT10 "galacturonosyltransferase 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2090210 QUA1 "QUASIMODO 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2039934 GAUT2 "galacturonosyltransferase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2074572 GAUT9 "galacturonosyltransferase 9" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:504955915 LGT5 "los glycosyltransferase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8GWT1	GAUTE_ARATH	2, ., 4, ., 1, ., -	0.8843	0.9906	1.0	yes	no
Q0WV13	GAUTD_ARATH	2, ., 4, ., 1, ., -	0.8789	0.9906	0.9981	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00021044001	SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (533 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00036829001	RecName- Full=Pectinesterase; EC=3.1.1.11; (364 aa)	•	0.899
	GSVIVG00036367001	SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (308 aa)	•	0.899
	GSVIVG00035359001	RecName- Full=Pectinesterase; EC=3.1.1.11; (299 aa)	•	0.899
	GSVIVG00033995001	RecName- Full=Pectinesterase; EC=3.1.1.11; (581 aa)	•	0.899
	GSVIVG00033942001	SubName- Full=Chromosome undetermined scaffold_71, whole genome shotgun sequence; (237 aa)	•	0.899
	GSVIVG00031642001	SubName- Full=Chromosome chr5 scaffold_58, whole genome shotgun sequence; (451 aa)	•	0.899
	GSVIVG00028034001	RecName- Full=Pectinesterase; EC=3.1.1.11; (465 aa)	•	0.899
	GSVIVG00026410001	SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (418 aa)	•	0.899
	GSVIVG00026388001	RecName- Full=Pectinesterase; EC=3.1.1.11; (513 aa)	•	0.899
	GSVIVG00022688001	RecName- Full=Pectinesterase; EC=3.1.1.11; (477 aa)	•	0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		537
PLN02870		533	PLN02870, PLN02870, Probable galacturonosyltransfe	0.0
PLN02659		534	PLN02659, PLN02659, Probable galacturonosyltransfe	0.0
PLN02867		535	PLN02867, PLN02867, Probable galacturonosyltransfe	0.0
PLN02742		534	PLN02742, PLN02742, Probable galacturonosyltransfe	1e-144
PLN02829		639	PLN02829, PLN02829, Probable galacturonosyltransfe	1e-143
PLN02523		559	PLN02523, PLN02523, galacturonosyltransferase	1e-133
PLN02910		657	PLN02910, PLN02910, polygalacturonate 4-alpha-gala	1e-129
PLN02718		603	PLN02718, PLN02718, Probable galacturonosyltransfe	1e-110
cd06429		257	cd06429, GT8_like_1, GT8_like_1 represents a subfa	1e-101
PLN02769		629	PLN02769, PLN02769, Probable galacturonosyltransfe	2e-87
pfam01501		248	pfam01501, Glyco_transf_8, Glycosyl transferase fa	3e-63
cd04194		248	cd04194, GT8_A4GalT_like, A4GalT_like proteins cat	5e-25
cd00505		246	cd00505, Glyco_transf_8, Members of glycosyltransf	4e-17
COG1442		325	COG1442, RfaJ, Lipopolysaccharide biosynthesis pro	9e-13
cd06432		248	cd06432, GT8_HUGT1_C_like, The C-terminal domain o	7e-05

>gnl\|CDD\|215468 PLN02870, PLN02870, Probable galacturonosyltransferase	Back alignment and domain information

 Score = 1113 bits (2879), Expect = 0.0
 Identities = 495/537 (92%), Positives = 526/537 (97%), Gaps = 4/537 (0%)

Query: 1   MQLHFSPSMRSITILSSNSNNGGFIDLMKIKVAARHLSYRTLFHTILILAFLLPFVFILT 60
           MQLH SPSMRSITI SSN    GFIDLMKIKVAARH+SYRTLFHTILILAFLLPFVFILT
Sbjct: 1   MQLHISPSMRSITISSSN----GFIDLMKIKVAARHISYRTLFHTILILAFLLPFVFILT 56

Query: 61  ALVTLEGVDKCSSFDCLGRRLGPRLLGRVDDSERLVKDFYKVLNQVDTEEIPDGLKLPDS 120
           A+VTLEGV+KCSSFDCLGRRLGPRLLGRVDDSERLV+DFYK+LN+V+TEEIPDGLKLPDS
Sbjct: 57  AVVTLEGVNKCSSFDCLGRRLGPRLLGRVDDSERLVRDFYKILNEVNTEEIPDGLKLPDS 116

Query: 121 FSELVSEMKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSL 180
           FS+LVS+MKNN YDAKTF F+LRAMMEKFERE+RESKFAELMNKHFAASSIPKGIHCLSL
Sbjct: 117 FSQLVSDMKNNHYDAKTFAFVLRAMMEKFERELRESKFAELMNKHFAASSIPKGIHCLSL 176

Query: 181 RLTDEYSSNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEKI 240
           RLTDEYSSNAHAR+QLPSPELLP+LSDNSYHHF+LSTDNILAASVVV+S VQSSLKPEKI
Sbjct: 177 RLTDEYSSNAHARKQLPSPELLPVLSDNSYHHFVLSTDNILAASVVVSSTVQSSLKPEKI 236

Query: 241 VFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYY 300
           VFHVITDKKTYAGMHSWFALN VSPAIVEVKG+HQFDWLTRENVPVLEAVE+H+GIRNYY
Sbjct: 237 VFHVITDKKTYAGMHSWFALNSVSPAIVEVKGVHQFDWLTRENVPVLEAVESHNGIRNYY 296

Query: 301 HGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQ 360
           HGNH+AGANLS+TTPRTFASKLQARSPKYISLLNHLRIY+PELFP+LDKVVFLDDD+VIQ
Sbjct: 297 HGNHIAGANLSETTPRTFASKLQARSPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQ 356

Query: 361 RDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGM 420
           RDLSPLW+IDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAK+LDPEECAWAYGM
Sbjct: 357 RDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKNLDPEECAWAYGM 416

Query: 421 NIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGL 480
           NIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWH+LGL
Sbjct: 417 NIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGL 476

Query: 481 GYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILET 537
           GYQ+KT+IESVKKAAVIHYNGQSKPWL+IGFEHLRPFW KYVNYSNDF+RNCHILE+
Sbjct: 477 GYQSKTNIESVKKAAVIHYNGQSKPWLEIGFEHLRPFWTKYVNYSNDFIRNCHILES 533

Length = 533

>gnl\|CDD\|215356 PLN02659, PLN02659, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|178458 PLN02867, PLN02867, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215395 PLN02742, PLN02742, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215443 PLN02829, PLN02829, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215286 PLN02523, PLN02523, galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215493 PLN02910, PLN02910, polygalacturonate 4-alpha-galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|178320 PLN02718, PLN02718, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|133051 cd06429, GT8_like_1, GT8_like_1 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>gnl\|CDD\|215412 PLN02769, PLN02769, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|216536 pfam01501, Glyco_transf_8, Glycosyl transferase family 8	Back alignment and domain information

>gnl\|CDD\|133037 cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	Back alignment and domain information

>gnl\|CDD\|132996 cd00505, Glyco_transf_8, Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis	Back alignment and domain information

>gnl\|CDD\|224359 COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>gnl\|CDD\|133054 cd06432, GT8_HUGT1_C_like, The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		537
PLN02870		533	Probable galacturonosyltransferase	100.0
PLN02659		534	Probable galacturonosyltransferase	100.0
PLN02867		535	Probable galacturonosyltransferase	100.0
PLN02829		639	Probable galacturonosyltransferase	100.0
PLN02910		657	polygalacturonate 4-alpha-galacturonosyltransferas	100.0
PLN02742		534	Probable galacturonosyltransferase	100.0
PLN02769		629	Probable galacturonosyltransferase	100.0
PLN02523		559	galacturonosyltransferase	100.0
PLN02718		603	Probable galacturonosyltransferase	100.0
cd06429		257	GT8_like_1 GT8_like_1 represents a subfamily of GT	100.0
PRK15171		334	lipopolysaccharide 1,3-galactosyltransferase; Prov	100.0
cd06431		280	GT8_LARGE_C LARGE catalytic domain has closest hom	100.0
cd00505		246	Glyco_transf_8 Members of glycosyltransferase fami	100.0
cd04194		248	GT8_A4GalT_like A4GalT_like proteins catalyze the	100.0
COG1442		325	RfaJ Lipopolysaccharide biosynthesis proteins, LPS	100.0
PF01501		250	Glyco_transf_8: Glycosyl transferase family 8; Int	100.0
cd06430		304	GT8_like_2 GT8_like_2 represents a subfamily of GT	100.0
cd06432		248	GT8_HUGT1_C_like The C-terminal domain of HUGT1-li	99.98
cd02537		240	GT8_Glycogenin Glycogenin belongs the GT 8 family	99.93
PLN00176		333	galactinol synthase	99.92
cd06914		278	GT8_GNT1 GNT1 is a fungal enzyme that belongs to t	99.75
KOG1879		1470	consensus UDP-glucose:glycoprotein glucosyltransfe	99.2
COG5597		368	Alpha-N-acetylglucosamine transferase [Cell envelo	97.69
PF03407		212	Nucleotid_trans: Nucleotide-diphospho-sugar transf	96.27
PLN03182		429	xyloglucan 6-xylosyltransferase; Provisional	91.93
PF05637		239	Glyco_transf_34: galactosyl transferase GMA12/MNN1	83.06

>PLN02870 Probable galacturonosyltransferase	Back alignment and domain information

Probab=100.00  E-value=9.7e-161  Score=1274.88  Aligned_cols=533  Identities=93%  Similarity=1.476  Sum_probs=507.5

Q ss_pred             CcccccCCcceEEEecCCCCCCCchhhHHHhhhhccccchhhHHHHHHHHHhhhHHHHHHHHhhhcCCCCcCCccccccc
Q 009348            1 MQLHFSPSMRSITILSSNSNNGGFIDLMKIKVAARHLSYRTLFHTILILAFLLPFVFILTALVTLEGVDKCSSFDCLGRR   80 (537)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (537)
                      ||||||||||||||++|    +|++|+||+|||+||+||||+||++|++||||||+||++|+++|||+++|||+||+|||
T Consensus         1 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~~~~~~~~~~c~~~~c~~~~   76 (533)
T PLN02870          1 MQLHISPSMRSITISSS----NGFIDLMKIKVAARHISYRTLFHTILILAFLLPFVFILTAVVTLEGVNKCSSFDCLGRR   76 (533)
T ss_pred             CceeecCccceEEEecC----CcHHHHHHHHhhhccchhhhHHHHHHHHHHHHhHHHHhhhhhhhcccccCCcccccccc
Confidence            99999999999999999    99999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCccccccCCchHHHHHHHHHHhHhhcCCCCCCCCcchhHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009348           81 LGPRLLGRVDDSERLVKDFYKVLNQVDTEEIPDGLKLPDSFSELVSEMKNNQYDAKTFGFMLRAMMEKFEREIRESKFAE  160 (537)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~  160 (537)
                      |||+|+||++++.+++||+++.|.|+..+|++.|+|||+++++++++|++.+|||+++++|||||++++|||++++|+|+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~lp~s~~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~  156 (533)
T PLN02870         77 LGPRLLGRVDDSERLVRDFYKILNEVNTEEIPDGLKLPDSFSQLVSDMKNNHYDAKTFAFVLRAMMEKFERELRESKFAE  156 (533)
T ss_pred             cCccccCCCCchhhhHHHHHHHHHHhccccccccccCChhHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCcccchhhhhchHHHhhchhhhccCCCCCccCCCCCCCccEEEEEeCCCcchhHHHHHHhhccCCCCce
Q 009348          161 LMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEKI  240 (537)
Q Consensus       161 ~~~~~la~~~~Pk~~hcl~~rl~~e~~~~~~~~~~~~~~~~~~~l~d~~~ihIa~~sDn~la~sVvI~Sil~ns~~p~~l  240 (537)
                      +|++||||+|+|||||||+||||+|||+++++++++|++|..|+|+||+++|||++|||++|+||||||++.|+++|+++
T Consensus       157 ~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~e~~~~l~dp~~~Hy~ifSdNvLAasVvvnStv~~a~~p~~~  236 (533)
T PLN02870        157 LMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARKQLPSPELLPVLSDNSYHHFVLSTDNILAASVVVSSTVQSSLKPEKI  236 (533)
T ss_pred             HHHHHHHHhhcCCCccccchhhHHHHHhCchhhhcCCcccccccccCCcceeEEEEecceeEEEeeeehhhhcccCccce
Confidence            99999999999999999999999999999999999999998999999999999999999999999999999999999999


Q ss_pred             EEEEEeCCcchhhhhhhhccCCCCcceeeeecccccccccccchhhHHhhhhccCeeeeecCCccccccCCCCCchhhhh
Q 009348          241 VFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFAS  320 (537)
Q Consensus       241 ~FHIvtd~~~~~amk~Wf~~n~~~~a~v~v~~l~~F~~l~~~~~p~l~~l~~~~~i~~~f~~~~~~~~~~~d~~~~~~~~  320 (537)
                      |||||||++||.+|++||.+||+++|+|||+|+|+|+||+++++|+++|+|+...++.+|+.+........+.+|+++.+
T Consensus       237 VFHvvTD~~n~~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (533)
T PLN02870        237 VFHVITDKKTYAGMHSWFALNSVSPAIVEVKGVHQFDWLTRENVPVLEAVESHNGIRNYYHGNHIAGANLSETTPRTFAS  316 (533)
T ss_pred             EEEEecCccccHHHHHHHhhCCCccceEEEEehhhccccccccchHHHHHhhhHHHHHHhhcccccccccccccchhhhc
Confidence            99999999999999999999999999999999999999999999999999999888888886544332233446777788


Q ss_pred             hhhccCCCCCchhhHHHHhhccccCCCCeEEEEecCeeEeCCchhhHhcCCCCceeEeeecccCCchhhhhhhhccccCC
Q 009348          321 KLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNF  400 (537)
Q Consensus       321 ~l~~~~~~~~S~~~y~Rf~iPellP~ldKVLYLD~DvIV~~DLseLw~iDL~g~viaAV~d~~~~~~~~~~~~~~~yln~  400 (537)
                      +++.++|+|+|+++|+||+||++||+++||||||+||||++||++||++||+|+++|||+||...+.+...++++.|+||
T Consensus       317 ~l~~~~p~ylS~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNf  396 (533)
T PLN02870        317 KLQARSPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNF  396 (533)
T ss_pred             ccccCCccccCHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhccc
Confidence            99999999999999999999999999999999999999999999999999999999999999754333344677889999


Q ss_pred             CchhhhcCCCCCCCcccccceeeecHHHHHhhHHHHHHHHHHHhccCCCcccCcCCccHHHhhccCcEEEcCCccccccc
Q 009348          401 SHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGL  480 (537)
Q Consensus       401 s~p~i~~~~~~~~~yfNSGVlLinL~~wR~~~it~~~~~~l~~~~~~~~~~~DQd~L~~~nl~f~g~i~~Ld~~WN~~~l  480 (537)
                      ++|.+..+|+++.||||||||||||++||++++++++++|++++.++++.+||||+|||+|++|+|++++||++||++++
T Consensus       397 s~p~i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~gL  476 (533)
T PLN02870        397 SHPLIAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGL  476 (533)
T ss_pred             ccchhhcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCCC
Confidence            99999999999999999999999999999999999999999987655688999999999999999999999999999999


Q ss_pred             ccCCccchhhcCCceEEEecCCCCCcccCCCCCCHHHHHHHHhhChhhhhhccCCCC
Q 009348          481 GYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILET  537 (537)
Q Consensus       481 gy~~~~~~~~i~~~~IIHf~G~~KPW~~~~~~~y~~lW~~Yl~~~~~~l~~cn~~~~  537 (537)
                      ||+.+...+.+++|+||||+|++|||++.++++|+.+|.+|++++++||++|||+|+
T Consensus       477 gy~~~~~~~~i~~aaIIHY~G~~KPW~~~~~~~yr~~W~kYl~~s~~fl~~Cni~~~  533 (533)
T PLN02870        477 GYQSKTNIESVKKAAVIHYNGQSKPWLEIGFEHLRPFWTKYVNYSNDFIRNCHILES  533 (533)
T ss_pred             CCcccccccccCCcEEEEECCCCCCccccCccchhHHHHHHHccCchHhhhcCCCCC
Confidence            998766667888999999999999999999999999999999999999999999985

>PLN02659 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02867 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02829 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase	Back alignment and domain information

>PLN02742 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02769 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02523 galacturonosyltransferase	Back alignment and domain information

>PLN02718 Probable galacturonosyltransferase	Back alignment and domain information

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional	Back alignment and domain information

>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis	Back alignment and domain information

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis	Back alignment and domain information

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	Back alignment and domain information

>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family	Back alignment and domain information

>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen	Back alignment and domain information

>PLN00176 galactinol synthase	Back alignment and domain information

>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family	Back alignment and domain information

>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases []	Back alignment and domain information

>PLN03182 xyloglucan 6-xylosyltransferase; Provisional	Back alignment and domain information

>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		537
1ss9_A		311	Crystal Structural Analysis Of Active Site Mutant Q		1e-07
1g9r_A		311	Crystal Structure Of Galactosyltransferase Lgtc In		2e-07

>pdb|1SS9|A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc Length = 311

Back alignment and structure

Iteration: 1

Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 47/223 (21%) Query: 306 AGANLS--DTTPRTFAS-KLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRD 362 G N+ D P FA L R +IS+ + R+ + E DKV++LD D++++ Sbjct: 55 GGGNIRFIDVNPEDFAGFPLNIR---HISITTYARLKLGEYIADCDKVLYLDIDVLVRDS 111 Query: 363 LSPLWEIDLGGKVNGA-----VETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWA 417 L+PLW+ DLG GA VE G + + YFN Sbjct: 112 LTPLWDTDLGDNWLGACIDLFVERQEGYKQKIGMADGEYYFN------------------ 153 Query: 418 YGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHL 477 G+ + +L+ WR+ +I + W+++ ++ ++ + L FKG V + ++ Sbjct: 154 AGVLLINLKKWRRHDIFKMSCEWVEQ--YKDVMQYQDEDILNGL--FKGGVCYANSRFNF 209 Query: 478 LGLGYQ--------------NKTSIESVKKAAVIHYNGQSKPW 506 + Y + +V AV HY G +KPW Sbjct: 210 MPTNYAFMANRFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPW 252

PyMOL of 1ss9

>pdb|1G9R|A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose Length = 311

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		537
1g9r_A		311	Glycosyl transferase; alpha-beta structure; HET: U	1e-53
3tzt_A		276	Glycosyl transferase family 8; structural genomics	2e-29
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-10

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Length = 311	Back alignment and structure

 Score =  183 bits (465), Expect = 1e-53
 Identities = 51/333 (15%), Positives = 108/333 (32%), Gaps = 76/333 (22%)

Query: 212 HFILSTDN--ILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVE 269
             + + D+       V   S   +     +I FHV+    + A   +  A        + 
Sbjct: 2   DIVFAADDNYAAYLCVAAKSVEAAH-PDTEIRFHVLDAGISEANRAAVAANLRGGGGNIR 60

Query: 270 VKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKY 329
                  +       P+                                       + ++
Sbjct: 61  ---FIDVNPEDFAGFPL---------------------------------------NIRH 78

Query: 330 ISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWV 389
           IS+  + R+ + E     DKV++LD D++++  L+PLW+ DLG    GA      +    
Sbjct: 79  ISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASI----DLFVE 134

Query: 390 MSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNL 449
             + ++     +           E  +  G+ + +L+ WR+ +I +    W+++    ++
Sbjct: 135 RQEGYKQKIGMADG---------EYYFNAGVLLINLKKWRRHDIFKMSSEWVEQY--KDV 183

Query: 450 TMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQN--------------KTSIESVKKAA 495
             ++   +   L  FKG V   +  ++ +   Y                +    +V   A
Sbjct: 184 MQYQDQDILNGL--FKGGVCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVA 241

Query: 496 VIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDF 528
           V HY G +KPW +         + +        
Sbjct: 242 VSHYCGPAKPWHRDCTAWGAERFTELAGSLTTV 274

PyMOL of 1g9r

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} Length = 276	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		537
3tzt_A		276	Glycosyl transferase family 8; structural genomics	100.0
1g9r_A		311	Glycosyl transferase; alpha-beta structure; HET: U	100.0
1ll2_A		333	Glycogenin-1; protein-substrate complex, beta-alph	99.93
3u2u_A		263	Glycogenin-1, GN-1, GN1; structural genomics, stru	99.91

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0	Back alignment and structure

Probab=100.00  E-value=8.7e-46  Score=374.55  Aligned_cols=257  Identities=16%  Similarity=0.257  Sum_probs=182.0

Q ss_pred             ccEEEEEeCCCc--chhHHHHHHhhccCCCCceEEEEEeCCcchhhhhhhhccCCCCcceeeeecccccccccccchhhH
Q 009348          210 YHHFILSTDNIL--AASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL  287 (537)
Q Consensus       210 ~ihIa~~sDn~l--a~sVvI~Sil~ns~~p~~l~FHIvtd~~~~~amk~Wf~~n~~~~a~v~v~~l~~F~~l~~~~~p~l  287 (537)
                      .+|||+++|+.|  +++|+|+|++.|+++ ++++|||++++++.+..+.                              |
T Consensus         5 ~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~~------------------------------L   53 (276)
T 3tzt_A            5 ADALLLTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLKD------------------------------L   53 (276)
T ss_dssp             CEEEEEECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHHH------------------------------H
T ss_pred             eEEEEEEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHHH------------------------------H
Confidence            489999999988  799999999999985 6799999999988654321                              1


Q ss_pred             HhhhhccCeeeeecCCccccccCCCCCchhhhhhhhc-cCCCCCchhhHHHHhhccccC-CCCeEEEEecCeeEeCCchh
Q 009348          288 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQA-RSPKYISLLNHLRIYIPELFP-HLDKVVFLDDDIVIQRDLSP  365 (537)
Q Consensus       288 ~~l~~~~~i~~~f~~~~~~~~~~~d~~~~~~~~~l~~-~~~~~~S~~~y~Rf~iPellP-~ldKVLYLD~DvIV~~DLse  365 (537)
                      +++.....+++.+..       +   .+.    .++. ...+++|..+|+||++|+++| +++||||||+|+||++||++
T Consensus        54 ~~~~~~~~~~i~~~~-------~---~~~----~~~~~~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~  119 (276)
T 3tzt_A           54 GEDLKKFSYTLYPIR-------A---TDD----LFSFAKVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDD  119 (276)
T ss_dssp             HHHHHTTTCEEEEEE-------C---C-----------------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHH
T ss_pred             HHHHHHcCCEEEEEE-------e---CHH----HHhcCccccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHH
Confidence            111111112222221       0   000    0111 123578999999999999999 59999999999999999999


Q ss_pred             hHhcCCCCceeEeeecccCCchhhhhhhhccccCCCchhhhcCCCCCCCcccccceeeecHHHHHhhHHHHHHHHHHHhc
Q 009348          366 LWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENL  445 (537)
Q Consensus       366 Lw~iDL~g~viaAV~d~~~~~~~~~~~~~~~yln~s~p~i~~~~~~~~~yfNSGVlLinL~~wR~~~it~~~~~~l~~~~  445 (537)
                      ||++|++|+++|||+||....       ..++.+      ..+++...||||||||||||++||+.+++++++++++++.
T Consensus       120 L~~~dl~~~~~aav~d~~~~~-------~~~~~~------~~~l~~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~  186 (276)
T 3tzt_A          120 LLRTDISDYILAAASHTGKTD-------MANNVN------RIRLGTDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNH  186 (276)
T ss_dssp             HHTCCCTTSSEEEEEC---------------------------------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC-
T ss_pred             HhhcCCCCCeEEEEEecccch-------HHHHHH------HhcCCCCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhcc
Confidence            999999999999999997531       111111      1234444699999999999999999999999999998874


Q ss_pred             cCCCcccCcCCccHHHhhccCcEEEcCC-cccccccccCC--------ccch-hhcCCceEEEecCCCCCcccCCCCCCH
Q 009348          446 KSNLTMWKLGTLPPALIAFKGHVHPIDP-SWHLLGLGYQN--------KTSI-ESVKKAAVIHYNGQSKPWLQIGFEHLR  515 (537)
Q Consensus       446 ~~~~~~~DQd~L~~~nl~f~g~i~~Ld~-~WN~~~lgy~~--------~~~~-~~i~~~~IIHf~G~~KPW~~~~~~~y~  515 (537)
                       ..+.++|||+|   |.+|++++++||+ +||+++. +..        ..+. +..++|+||||+|..|||...+.++|+
T Consensus       187 -~~~~~~DQd~L---N~~f~~~~~~Lp~~~wN~~~~-~~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~~~~  261 (276)
T 3tzt_A          187 -MNLLLPDQDIL---NAMYGDRIYPLDDLIYNYDAR-NYSSYLIRSKKQADLAWLMDHTVVLHFCGRDKPWKKNHRNKFT  261 (276)
T ss_dssp             --------CHHH---HHHHGGGEEEEEHHHHSEETT-CHHHHHHHTTTCCSHHHHHHHCCEEECCSSCCTTSTTCCSTTH
T ss_pred             -ccccCCChhHH---HHHHhCCEEECCchheeeecc-cchhhhccccchhhhhhhccCCeEEEECCCCCCcCCCCCCchH
Confidence             34678999999   7999999999999 9999862 210        1111 345789999999999999999989999


Q ss_pred             HHHHHHHhhChhhh
Q 009348          516 PFWAKYVNYSNDFV  529 (537)
Q Consensus       516 ~lW~~Yl~~~~~~l  529 (537)
                      ++||+|++..+++|
T Consensus       262 ~~w~~Y~~~~~~~~  275 (276)
T 3tzt_A          262 SLYKHYMSLTKRYL  275 (276)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998886

PyMOL of 3tzt

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*	Back alignment and structure

>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*	Back alignment and structure

>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		537
d1ga8a_		282	c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseri	4e-26
d1ll2a_		263	c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cun	1e-04

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Length = 282	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

 Score =  105 bits (263), Expect = 4e-26
 Identities = 42/222 (18%), Positives = 84/222 (37%), Gaps = 31/222 (13%)

Query: 321 KLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVE 380
                + ++IS+  + R+ + E     DKV++LD D++++  L+PLW+ DLG    GA  
Sbjct: 70  AGFPLNIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASI 129

Query: 381 TCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSW 440
               +      + ++     +           E  +  G+ + +L+ WR+ +I +    W
Sbjct: 130 ----DLFVERQEGYKQKIGMADG---------EYYFNAGVLLINLKKWRRHDIFKMSSEW 176

Query: 441 LKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQN--------------KT 486
           +++  K  +       L      FKG V   +  ++ +   Y                + 
Sbjct: 177 VEQY-KDVMQYQDQDILN---GLFKGGVCYANSRFNFMPTNYAFMANWFASRHTDPLYRD 232

Query: 487 SIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDF 528
              +V   AV HY G +KPW +         + +        
Sbjct: 233 RTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELAGSLTTV 274

PyMOL of d1ga8a_

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 263	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		537
d1ga8a_		282	Galactosyltransferase LgtC {Neisseria meningitidis	100.0
d1ll2a_		263	Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId:	99.92
d1lzia_		283	Glycosyltransferase A catalytic domain {Human (Hom	91.62
d1o7qa_		287	alpha-1,3-galactosyltransferase catalytic domain {	90.82

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=100.00  E-value=4e-42  Score=343.40  Aligned_cols=255  Identities=21%  Similarity=0.325  Sum_probs=193.3

Q ss_pred             cEEEEEeCCCc--chhHHHHHHhhccCCCCceEEEEEeCCcchhhhhhhhccCCCCcceeeeecccccccccccchhhHH
Q 009348          211 HHFILSTDNIL--AASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLE  288 (537)
Q Consensus       211 ihIa~~sDn~l--a~sVvI~Sil~ns~~p~~l~FHIvtd~~~~~amk~Wf~~n~~~~a~v~v~~l~~F~~l~~~~~p~l~  288 (537)
                      +|||+++|++|  +++|+|+|+++|+++ .+++|||++++++.+..+.....                            
T Consensus         1 mnIv~~~D~nY~~~~~~~i~SL~~~~~~-~~~~~~il~~~~~~~~~~~l~~~----------------------------   51 (282)
T d1ga8a_           1 MDIVFAADDNYAAYLCVAAKSVEAAHPD-TEIRFHVLDAGISEANRAAVAAN----------------------------   51 (282)
T ss_dssp             CEEEEEECGGGHHHHHHHHHHHHHHCTT-SCCEEEEEESSCCHHHHHHHHHT----------------------------
T ss_pred             CEEEEECCHHHHHHHHHHHHHHHHHCcC-CCEEEEEEcCCCCHHHHHHHHHH----------------------------
Confidence            69999999988  689999999998865 67999999999886643321110                            


Q ss_pred             hhhhccCeeeeecCCccccccCCCCCchhhhhhhhccCCCCCchhhHHHHhhccccCCCCeEEEEecCeeEeCCchhhHh
Q 009348          289 AVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWE  368 (537)
Q Consensus       289 ~l~~~~~i~~~f~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~S~~~y~Rf~iPellP~ldKVLYLD~DvIV~~DLseLw~  368 (537)
                        .......+.+..-          ++..+ ... ....+++|.++|+||++|++||+++||||||+|+||.+||++||+
T Consensus        52 --~~~~~~~i~~~~~----------~~~~~-~~~-~~~~~~~s~~~y~Rl~l~~~lp~~~kiiyLD~D~iv~~dl~~L~~  117 (282)
T d1ga8a_          52 --LRGGGGNIRFIDV----------NPEDF-AGF-PLNIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWD  117 (282)
T ss_dssp             --SGGGTTTEEEEEC----------CGGGG-TTS-CCCCTTCCGGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHT
T ss_pred             --HHHcCCeEEEEEC----------CchHh-ccc-cccccccCHHHHHHHHHhhhCCccceEEEecCCEEEecchHHHHh
Confidence              0000111222210          00001 000 113467899999999999999999999999999999999999999


Q ss_pred             cCCCCceeEeeecccCCchhhhhhhhccccCCCchhhhcCCCCCCCcccccceeeecHHHHHhhHHHHHHHHHHHhccCC
Q 009348          369 IDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSN  448 (537)
Q Consensus       369 iDL~g~viaAV~d~~~~~~~~~~~~~~~yln~s~p~i~~~~~~~~~yfNSGVlLinL~~wR~~~it~~~~~~l~~~~~~~  448 (537)
                      +|++++.+|||.|+....    .......         .++.++.+||||||||+|+++||+++++++++++++++. ..
T Consensus       118 ~~~~~~~~aa~~d~~~~~----~~~~~~~---------~~~~~~~~yfNsGVml~n~~~~r~~~~~~~~~~~~~~~~-~~  183 (282)
T d1ga8a_         118 TDLGDNWLGASIDLFVER----QEGYKQK---------IGMADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYK-DV  183 (282)
T ss_dssp             CCCTTCSEEEEECHHHHT----STTHHHH---------TTCCTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHT-TT
T ss_pred             cccccceeeeehhhhhhh----hhhhHHH---------hCCCCCCceeecceeeechhhhhhhhHHHHHHHHHHhcc-cC
Confidence            999999999999975321    0111122         234567899999999999999999999999999999875 35


Q ss_pred             CcccCcCCccHHHhhccCcEEEcCCcccccccccCCc---------c----c-hhhcCCceEEEecCCCCCcccCCCCCC
Q 009348          449 LTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNK---------T----S-IESVKKAAVIHYNGQSKPWLQIGFEHL  514 (537)
Q Consensus       449 ~~~~DQd~L~~~nl~f~g~i~~Ld~~WN~~~lgy~~~---------~----~-~~~i~~~~IIHf~G~~KPW~~~~~~~y  514 (537)
                      ..++|||+|   |.+|+|++..||.+||++..+|...         .    + .+...+++||||+|+.|||...+.+.+
T Consensus       184 ~~~~DQd~L---N~~f~~~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~G~~KPW~~~~~~~~  260 (282)
T d1ga8a_         184 MQYQDQDIL---NGLFKGGVCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWG  260 (282)
T ss_dssp             CSSTHHHHH---HHHHTTSEEEECGGGSBCHHHHHTCC----CSCCCHHHHHHHSCCSSCSEEECCSSCCTTSTTCCSTT
T ss_pred             cccCchhHH---HHHhcCCEEeCCHHHeeccccccccccccccccchhhhhhhhhccCCCEEEeeCCCCCCCCCCCCChh
Confidence            678999998   6899999999999999986433210         0    1 234567999999999999998888889


Q ss_pred             HHHHHHHHhhC
Q 009348          515 RPFWAKYVNYS  525 (537)
Q Consensus       515 ~~lW~~Yl~~~  525 (537)
                      .+.|++|....
T Consensus       261 ~~~~~~~~~~~  271 (282)
T d1ga8a_         261 AERFTELAGSL  271 (282)
T ss_dssp             THHHHHHHTTC
T ss_pred             HHHHHHHHHhh
Confidence            99999998753

PyMOL of d1ga8a_

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure

>d1lzia_ c.68.1.9 (A:) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure