Citrus Sinensis ID: 009355

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------
MDSTILPQSLLHHFIIKSRFHRIFMPAKSPELGLYRQRWQSTSCWSVGLSGLGAGNVSDDSFLKGNENGSLLGDFDESVSAPFGTVDAEITPETIDFFVSDAEGDPDCPTEGFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSSAPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVLRRAGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISSIIDLIRYRRKRETIVERTAISRLPTKWGLFQAYCYRSKLDGTDHVAVVKGNMGNGQDVLVRVHSECLTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPILTPITEENKRYLETKRTKMGHIYGSDLQGPLFGSTVNNIESQEGEQKDS
cccccccccccccEEEccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccEEEEEEcccccccHHHHHHcccccHHHHHHHHHHcccEEEccccHHHHHHccccccccccccccccccccEEEEEccccccccccHHHHHHHHHHHcccccccccccccccccccccccccEEEcccccHHHHHHHHHHcccccEEEEEEccccccccccHHHHHHHHHHccccEEEHHHHHHHHHHcccEEEEEEEEEcccccEEEEEEEEEEcccccEEEEEEEcccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHccEEEEEEcccccccccHHHHHHHHHHHHcccccHHHHHHcccccccHHHHHHHHHHHHccccEEEEccccHHHHccccccccEEEEEEEccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccc
ccccccccccccEEEEEccccccccccccccHHEEEcccccccEEEEEEccccccccccHHHccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccEEEEEccccccccccHHHHHHHccHHHHHHHHHHcccEEEEEccHHHHHHccccccccccccccccccEEEEEEEccccccccccHHHHHHHHHHHHcccccHHHEEEEEEEEEEEccccHHHHcccHHHHHHHHHHHcccccEEEEEEEEEccccccccHHHHHHHHHHccccEEEHHHHHHHHHHHccHEEEEEEEccccccccEEEEEEEEEccccEEEEEEEccccccccEEEEEEccccccccccccccccHHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHHHHHHHHccccHHHHHHHccccHcHHHHcHHHHHHHHHcccEEEEEEccccHEEccccccEEEEccccEEEcccHHHHHHHHHHHHHHccHccccccccccccccccccccccccccc
mdstilpqsllHHFIIKsrfhrifmpakspelglyrqrwqstscwsvglsglgagnvsddsflkgnengsllgdfdesvsapfgtvdaeitpetidffvsdaegdpdcptegfSSIEQALNTLRQGKFVIVVedengdvegNLVMAasltsprhVAFMVKHgsgivsvgmkeedlqrlnlplmspeaenedssaptftitvdakfgtttgvsasdRAKTVLalsspdskpenfrrpghvfplkyrnggvlrraghteASVDLLVLAglnpvsvlsavvdpedgsmsslpsLRKLALehsipissIIDLIRYRRKRETIVERTAisrlptkwglFQAYcyrskldgtdhVAVVKGNMGNGQDVLVRVHSEcltgdifgsarcdcgNQLDLAMQIIEKAGKGVVVYLRGhegrgiglghklraynlqdqghDTVQANIELGLAVDAREYGIGAQILRDLGVRTMRlmtnnpakfiglkgyglavigrvpiltpitEENKRYLETKRtkmghiygsdlqgplfgstvnniesqegeqkds
MDSTILPQSLLHHFIIKSRFHRIFMPAKSPELGLYRQRWQSTSCWSVGLSGLGAGNVSDDSFLKGNENGSLLGDFDESVSAPFGTVDAEITPETIDFFVSDAEGDPDCPTEGFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSSAPTFTITVDAKFgtttgvsasdrAKTVLalsspdskpenfrrpghvfpLKYRNGGVLRRAGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLalehsipissiidliryrrKRETIVertaisrlptkwglFQAYCYRSKLDGTDHVAVVKGNMGNGQDVLVRVHSECLTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGrvpiltpiteenKRYLETKRTKMGHIYGSDLQGPLFGSTVNniesqegeqkds
MDSTILPQSLLHHFIIKSRFHRIFMPAKSPELGLYRQRWQSTSCWSVGLSGLGAGNVSDDSFLKGNENGSLLGDFDESVSAPFGTVDAEITPETIDFFVSDAEGDPDCPTEGFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSSAPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVLRRAGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISSIIDLIRYRRKRETIVERTAISRLPTKWGLFQAYCYRSKLDGTDHVAVVKGNMGNGQDVLVRVHSECLTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPILTPITEENKRYLETKRTKMGHIYGSDLQGPLFGSTVNNIESQEGEQKDS
*****LPQSLLHHFIIKSRFHRIFMPAKSPELGLYRQRWQSTSCWSVGLSGLGAGNVSDDSFLK*****SLLGDFDESVSAPFGTVDAEITPETIDFFVSDA*********GFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVG***************************FTITVDAKFG*******************************HVFPLKYRNGGVLRRAGHTEASVDLLVLAGLNPVSVLSAVV*************RKLALEHSIPISSIIDLIRYRRKRETIVERTAISRLPTKWGLFQAYCYRSKLDGTDHVAVVKGNMGNGQDVLVRVHSECLTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPILTPITEENKRYLETKRTKMGHIYGSDLQGPLF*****************
*********LLHHFIIKSRFHRIF*P*KSPELGLYRQRWQSTSCWSVGLSG********************************GTVDAEITPETIDFFV********CPTEGFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSSAPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVLRRAGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISSIIDLIRYRRKRETIVERTAISRLPTKWGLFQAYCYRSKLDGTDHVAVVKGNMGNGQDVLVRVHSECLTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPILTPITEENKRYLETKRTKMGHIYGSDLQGP*******************
MDSTILPQSLLHHFIIKSRFHRIFMPAKSPELGLYRQRWQSTSCWSVGLSGLGAGNVSDDSFLKGNENGSLLGDFDESVSAPFGTVDAEITPETIDFFVSDAEGDPDCPTEGFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSP********APTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVLRRAGHTEASVDLLVLAGLNPVSVLSAVVD*********PSLRKLALEHSIPISSIIDLIRYRRKRETIVERTAISRLPTKWGLFQAYCYRSKLDGTDHVAVVKGNMGNGQDVLVRVHSECLTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPILTPITEENKRYLETKRTKMGHIYGSDLQGPLFGSTVNNI**********
**STILPQSLLHHFIIKSRFHRIFMPAKSPELGLYRQRWQSTSCWSVGLSGLGAGNVSDDSFLKGNENGSLLGDFDESVSAP**TVDAEITPETIDFFVSDAEGDPDCPTEGFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSSAPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVLRRAGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISSIIDLIRYRRKRETIVERTAISRLPTKWGLFQAYCYRSKLDGTDHVAVVKGNMGNGQDVLVRVHSECLTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPILTPITEENKRYLETKRTKMGHIYGSDLQ*********************
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDSTILPQSLLHHFIIKSRFHRIFMPAKSPELGLYRQRWQSTSCWSVGLSGLGAGNVSDDSFLKGNENGSLLGDFDESVSAPFGTVDAEITPETIDFFVSDAEGDPDCPTEGFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSSAPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVLRRAGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISSIIDLIRYRRKRETIVERTAISRLPTKWGLFQAYCYRSKLDGTDHVAVVKGNMGNGQDVLVRVHSECLTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPILTPITEENKRYLETKRTKMGHIYGSDLQGPLFGSTVNNIESQEGEQKDS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query537 2.2.26 [Sep-21-2011]
P47924543 Riboflavin biosynthesis p no no 0.925 0.915 0.613 1e-180
A4X639400 Riboflavin biosynthesis p yes no 0.739 0.992 0.545 1e-125
A8LY38420 Riboflavin biosynthesis p yes no 0.765 0.978 0.524 1e-122
B1MCA4417 Riboflavin biosynthesis p yes no 0.735 0.947 0.544 1e-119
O66679406 Riboflavin biosynthesis p yes no 0.737 0.975 0.523 1e-119
Q0AXM5398 Riboflavin biosynthesis p yes no 0.737 0.994 0.531 1e-118
Q0S0K2417 Riboflavin biosynthesis p yes no 0.735 0.947 0.539 1e-118
C0ZZE5424 Riboflavin biosynthesis p yes no 0.735 0.931 0.539 1e-118
Q5YTP3414 Riboflavin biosynthesis p yes no 0.735 0.954 0.535 1e-118
Q8NQ52422 Riboflavin biosynthesis p yes no 0.733 0.933 0.527 1e-117
>sp|P47924|RIBBA_ARATH Riboflavin biosynthesis protein ribBA, chloroplastic OS=Arabidopsis thaliana GN=RIBBA PE=2 SV=2 Back     alignment and function desciption
 Score =  632 bits (1630), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 321/523 (61%), Positives = 397/523 (75%), Gaps = 26/523 (4%)

Query: 20  FHRIFMPAKSPELGLYRQRWQSTSCWSVGLSGLGAGNVS--DD--SFLKGN---ENGSLL 72
            HR+ +P+  P          ST         + A  +S  DD  SF  GN    NGSL+
Sbjct: 32  LHRVTLPSNHP---------LSTFSIKTNTGKVKAAVISREDDLLSFTNGNTPLSNGSLI 82

Query: 73  GDFDE----SVSAPFGTVDAEITPETIDFFVS-DAEGDPDCPTEGFSSIEQALNTLRQGK 127
            D  E    + S   GT+ A+  P   + FV+ D + + D PT GFSSI +A+  +RQGK
Sbjct: 83  DDRTEEPLEADSVSLGTLAADSAPAPANGFVAEDDDFELDLPTPGFSSIPEAIEDIRQGK 142

Query: 128 FVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEA 187
            V+VV+DE+ + EG+LVMAA L +P  +AF+V+HG+GIV V MKE+DL+RL+LPLM  + 
Sbjct: 143 LVVVVDDEDRENEGDLVMAAQLATPEAMAFIVRHGTGIVCVSMKEDDLERLHLPLMVNQK 202

Query: 188 ENEDSSAPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNG 247
           ENE+  +  FT+TVDAK GTTTGVSA DRA T+L+L+S DSKPE+F RPGH+FPLKYR G
Sbjct: 203 ENEEKLSTAFTVTVDAKHGTTTGVSARDRATTILSLASRDSKPEDFNRPGHIFPLKYREG 262

Query: 248 GVLRRAGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISSIID 307
           GVL+RAGHTEASVDL VLAGL+PV VL  +VD +DGSM+ LP LR+ A E+++ + SI D
Sbjct: 263 GVLKRAGHTEASVDLTVLAGLDPVGVLCEIVD-DDGSMARLPKLREFAAENNLKVVSIAD 321

Query: 308 LIRYRRKRETIVERTAISRLPTKWGLFQAYCYRSKLDGTDHVAVVKGNMGNGQDVLVRVH 367
           LIRYRRKR+ +VER + +R+PT WG F AYCYRS LDG +H+A+VKG +G+GQD+LVRVH
Sbjct: 322 LIRYRRKRDKLVERASAARIPTMWGPFTAYCYRSILDGIEHIAMVKGEIGDGQDILVRVH 381

Query: 368 SECLTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKLRAYNLQDQ 427
           SECLTGDIFGSARCDCGNQL L+MQ IE  G+GV+VYLRGHEGRGIGLGHKLRAYNLQD 
Sbjct: 382 SECLTGDIFGSARCDCGNQLALSMQQIEATGRGVLVYLRGHEGRGIGLGHKLRAYNLQDA 441

Query: 428 GHDTVQANIELGLAVDAREYGIGAQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVP 487
           G DTV+AN ELGL VD+REYGIGAQI+RDLGVRTM+LMTNNPAK++GLKGYGLA++GRVP
Sbjct: 442 GRDTVEANEELGLPVDSREYGIGAQIIRDLGVRTMKLMTNNPAKYVGLKGYGLAIVGRVP 501

Query: 488 ILTPITEENKRYLETKRTKMGHIYGSDLQGPLFGSTVNNIESQ 530
           +L+ IT+ENKRYLETKRTKMGH+YG   +    G  V  IES+
Sbjct: 502 LLSLITKENKRYLETKRTKMGHMYGLKFK----GDVVEKIESE 540
Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 4EC: .EC: 2EC: 5
>sp|A4X639|RIBBA_SALTO Riboflavin biosynthesis protein RibBA OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|A8LY38|RIBBA_SALAI Riboflavin biosynthesis protein RibBA OS=Salinispora arenicola (strain CNS-205) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|B1MCA4|RIBBA_MYCA9 Riboflavin biosynthesis protein RibBA OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|O66679|RIBBA_AQUAE Riboflavin biosynthesis protein RibBA OS=Aquifex aeolicus (strain VF5) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|Q0AXM5|RIBBA_SYNWW Riboflavin biosynthesis protein RibBA OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|Q0S0K2|RIBBA_RHOSR Riboflavin biosynthesis protein RibBA OS=Rhodococcus sp. (strain RHA1) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|C0ZZE5|RIBBA_RHOE4 Riboflavin biosynthesis protein RibBA OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|Q5YTP3|RIBBA_NOCFA Riboflavin biosynthesis protein RibBA OS=Nocardia farcinica (strain IFM 10152) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|Q8NQ52|RIBBA_CORGL Riboflavin biosynthesis protein RibBA OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=ribBA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query537
255587675538 GTP cyclohydrolase II, putative [Ricinus 0.970 0.968 0.802 0.0
225435086519 PREDICTED: riboflavin biosynthesis prote 0.959 0.992 0.803 0.0
356558318533 PREDICTED: riboflavin biosynthesis prote 0.979 0.986 0.777 0.0
224059534441 predicted protein [Populus trichocarpa] 0.821 1.0 0.875 0.0
357454081577 Riboflavin biosynthesis protein ribBA [M 0.942 0.876 0.703 0.0
147858033480 hypothetical protein VITISV_003138 [Viti 0.886 0.991 0.736 0.0
297793531505 hypothetical protein ARALYDRAFT_496108 [ 0.927 0.986 0.725 0.0
18424277509 GTP cyclohydrolase II [Arabidopsis thali 0.931 0.982 0.724 0.0
334188500543 GTP cyclohydrolase II [Arabidopsis thali 0.931 0.920 0.679 0.0
357133373527 PREDICTED: riboflavin biosynthesis prote 0.964 0.982 0.674 0.0
>gi|255587675|ref|XP_002534352.1| GTP cyclohydrolase II, putative [Ricinus communis] gi|223525444|gb|EEF28032.1| GTP cyclohydrolase II, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  884 bits (2285), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/522 (80%), Positives = 474/522 (90%), Gaps = 1/522 (0%)

Query: 1   MDSTILPQSLLHHFIIKSRFHR-IFMPAKSPELGLYRQRWQSTSCWSVGLSGLGAGNVSD 59
           MDS + P     H  I S FH+ +F    S  +G Y+ ++ S +CW+ G++G+GAGN+SD
Sbjct: 1   MDSALCPYLSCPHIFINSSFHKQLFSAPHSTGIGPYKHKFSSPTCWATGVTGIGAGNLSD 60

Query: 60  DSFLKGNENGSLLGDFDESVSAPFGTVDAEITPETIDFFVSDAEGDPDCPTEGFSSIEQA 119
           DS  KG+ENGSLLG F ES SAPFGT+DAEITPETIDFFVSDAEGDPDCPT G+SSIEQA
Sbjct: 61  DSSSKGSENGSLLGSFHESTSAPFGTLDAEITPETIDFFVSDAEGDPDCPTPGYSSIEQA 120

Query: 120 LNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLN 179
           LNTLRQGKFVIVV+DENGD+EGN+VMAASLTSP+ VAFMVKHGSGIVSV M  +DL RL 
Sbjct: 121 LNTLRQGKFVIVVDDENGDIEGNIVMAASLTSPKQVAFMVKHGSGIVSVSMTVDDLNRLK 180

Query: 180 LPLMSPEAENEDSSAPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHV 239
           LPLMSPE+E+EDSSAPTFT TVDA+ GT+TGVSA+DRAKTV+AL+SP+SKPE+FRRPGHV
Sbjct: 181 LPLMSPESEDEDSSAPTFTTTVDARTGTSTGVSAADRAKTVVALASPESKPEDFRRPGHV 240

Query: 240 FPLKYRNGGVLRRAGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHS 299
           FPLKYRNGGVLRRAGHTEAS+DLL+LAGL PVSVLSA+VDP+DGSM+SL SL KLA E+S
Sbjct: 241 FPLKYRNGGVLRRAGHTEASIDLLILAGLRPVSVLSAIVDPDDGSMASLSSLTKLASEYS 300

Query: 300 IPISSIIDLIRYRRKRETIVERTAISRLPTKWGLFQAYCYRSKLDGTDHVAVVKGNMGNG 359
           IP+ SI D+IRYRRKRE +VERTA+SRLPTKWGLFQAYCYRSKLDGT+H+A+VKG++G+G
Sbjct: 301 IPVVSITDIIRYRRKRENLVERTAVSRLPTKWGLFQAYCYRSKLDGTEHIAIVKGDIGDG 360

Query: 360 QDVLVRVHSECLTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKL 419
           +DVLVRVHSECLTGDIFGS RCDCGNQL+LAMQ+IE+AG+GVV+YLRGHEGRGIGLGHKL
Sbjct: 361 EDVLVRVHSECLTGDIFGSGRCDCGNQLNLAMQLIEQAGRGVVIYLRGHEGRGIGLGHKL 420

Query: 420 RAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILRDLGVRTMRLMTNNPAKFIGLKGYG 479
           RAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILRD+ VRTMRLMTNNPAKF GLKGYG
Sbjct: 421 RAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILRDVRVRTMRLMTNNPAKFTGLKGYG 480

Query: 480 LAVIGRVPILTPITEENKRYLETKRTKMGHIYGSDLQGPLFG 521
           LAVIGRVP+LTPITEENK+YLETKRTKMGHIYGSDLQGPL G
Sbjct: 481 LAVIGRVPVLTPITEENKKYLETKRTKMGHIYGSDLQGPLTG 522

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225435086|ref|XP_002281446.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic [Vitis vinifera] gi|297746140|emb|CBI16196.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356558318|ref|XP_003547454.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|224059534|ref|XP_002299894.1| predicted protein [Populus trichocarpa] gi|222847152|gb|EEE84699.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357454081|ref|XP_003597321.1| Riboflavin biosynthesis protein ribBA [Medicago truncatula] gi|355486369|gb|AES67572.1| Riboflavin biosynthesis protein ribBA [Medicago truncatula] Back     alignment and taxonomy information
>gi|147858033|emb|CAN80350.1| hypothetical protein VITISV_003138 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297793531|ref|XP_002864650.1| hypothetical protein ARALYDRAFT_496108 [Arabidopsis lyrata subsp. lyrata] gi|297310485|gb|EFH40909.1| hypothetical protein ARALYDRAFT_496108 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18424277|ref|NP_568913.1| GTP cyclohydrolase II [Arabidopsis thaliana] gi|13605708|gb|AAK32847.1|AF361835_1 AT5g59750/mth12_150 [Arabidopsis thaliana] gi|9758840|dbj|BAB09512.1| GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone-4-phoshate synthase [Arabidopsis thaliana] gi|15215752|gb|AAK91421.1| AT5g59750/mth12_150 [Arabidopsis thaliana] gi|27363454|gb|AAO11646.1| At5g59750/mth12_150 [Arabidopsis thaliana] gi|332009844|gb|AED97227.1| GTP cyclohydrolase II [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|334188500|ref|NP_001190571.1| GTP cyclohydrolase II [Arabidopsis thaliana] gi|332009845|gb|AED97228.1| GTP cyclohydrolase II [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357133373|ref|XP_003568299.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query537
TAIR|locus:2173373543 GCH "GTP cyclohydrolase II" [A 0.927 0.917 0.615 1.5e-163
TAIR|locus:2041253476 RIBA2 "homolog of ribA 2" [Ara 0.785 0.886 0.571 2.3e-126
TIGR_CMR|CHY_1473401 CHY_1473 "3,4-dihydroxy-2-buta 0.733 0.982 0.543 9.4e-114
UNIPROTKB|P0A5V0425 ribBA "Riboflavin biosynthesis 0.741 0.936 0.532 1.2e-106
TIGR_CMR|GSU_1690400 GSU_1690 "3,4-dihydroxy-2-buta 0.728 0.977 0.511 1.2e-104
TIGR_CMR|BA_4333397 BA_4333 "3,4-dihydroxy-2-butan 0.729 0.987 0.521 4.1e-104
TIGR_CMR|DET_1188403 DET_1188 "3,4-dihydroxy-2-buta 0.735 0.980 0.503 7.7e-103
TIGR_CMR|CBU_0647387 CBU_0647 "riboflavin biosynthe 0.702 0.974 0.475 1.7e-89
UNIPROTKB|Q9KPU3369 VC_2269 "3,4-dihydroxy-2-butan 0.668 0.972 0.395 8.8e-63
TIGR_CMR|VC_2269369 VC_2269 "3,4-dihydroxy-2-butan 0.668 0.972 0.395 8.8e-63
TAIR|locus:2173373 GCH "GTP cyclohydrolase II" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1592 (565.5 bits), Expect = 1.5e-163, P = 1.5e-163
 Identities = 320/520 (61%), Positives = 399/520 (76%)

Query:    21 HRIFMPAKSPELGLYRQRWQSTSCWSVGLSGLGAGNVSDD--SFLKGN---ENGSLLGDF 75
             HR+ +P+  P L  +  +   T+   V  + +      DD  SF  GN    NGSL+ D 
Sbjct:    33 HRVTLPSNHP-LSTFSIK---TNTGKVKAAVISR---EDDLLSFTNGNTPLSNGSLIDDR 85

Query:    76 DESV----SAPFGTVDAEITPETIDFFVS-DAEGDPDCPTEGFSSIEQALNTLRQGKFVI 130
              E      S   GT+ A+  P   + FV+ D + + D PT GFSSI +A+  +RQGK V+
Sbjct:    86 TEEPLEADSVSLGTLAADSAPAPANGFVAEDDDFELDLPTPGFSSIPEAIEDIRQGKLVV 145

Query:   131 VVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENE 190
             VV+DE+ + EG+LVMAA L +P  +AF+V+HG+GIV V MKE+DL+RL+LPLM  + ENE
Sbjct:   146 VVDDEDRENEGDLVMAAQLATPEAMAFIVRHGTGIVCVSMKEDDLERLHLPLMVNQKENE 205

Query:   191 DSSAPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVL 250
             +  +  FT+TVDAK GTTTGVSA DRA T+L+L+S DSKPE+F RPGH+FPLKYR GGVL
Sbjct:   206 EKLSTAFTVTVDAKHGTTTGVSARDRATTILSLASRDSKPEDFNRPGHIFPLKYREGGVL 265

Query:   251 RRAGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISSIIDLIR 310
             +RAGHTEASVDL VLAGL+PV VL  +VD +DGSM+ LP LR+ A E+++ + SI DLIR
Sbjct:   266 KRAGHTEASVDLTVLAGLDPVGVLCEIVD-DDGSMARLPKLREFAAENNLKVVSIADLIR 324

Query:   311 YRRKRETIVERTAISRLPTKWGLFQAYCYRSKLDGTDHVAVVKGNMGNGQDVLVRVHSEC 370
             YRRKR+ +VER + +R+PT WG F AYCYRS LDG +H+A+VKG +G+GQD+LVRVHSEC
Sbjct:   325 YRRKRDKLVERASAARIPTMWGPFTAYCYRSILDGIEHIAMVKGEIGDGQDILVRVHSEC 384

Query:   371 LTGDIFGSARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKLRAYNLQDQGHD 430
             LTGDIFGSARCDCGNQL L+MQ IE  G+GV+VYLRGHEGRGIGLGHKLRAYNLQD G D
Sbjct:   385 LTGDIFGSARCDCGNQLALSMQQIEATGRGVLVYLRGHEGRGIGLGHKLRAYNLQDAGRD 444

Query:   431 TVQANIELGLAVDAREYGIGAQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPILT 490
             TV+AN ELGL VD+REYGIGAQI+RDLGVRTM+LMTNNPAK++GLKGYGLA++GRVP+L+
Sbjct:   445 TVEANEELGLPVDSREYGIGAQIIRDLGVRTMKLMTNNPAKYVGLKGYGLAIVGRVPLLS 504

Query:   491 PITEENKRYLETKRTKMGHIYGSDLQGPLFGSTVNNIESQ 530
              IT+ENKRYLETKRTKMGH+YG   +G +    V  IES+
Sbjct:   505 LITKENKRYLETKRTKMGHMYGLKFKGDV----VEKIESE 540
GO:0003935 "GTP cyclohydrolase II activity" evidence=IEA;IGI;ISS
GO:0008686 "3,4-dihydroxy-2-butanone-4-phosphate synthase activity" evidence=IEA;IGI;ISS
GO:0009231 "riboflavin biosynthetic process" evidence=IEA;IGI;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016020 "membrane" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0048767 "root hair elongation" evidence=RCA
TAIR|locus:2041253 RIBA2 "homolog of ribA 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1473 CHY_1473 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
UNIPROTKB|P0A5V0 ribBA "Riboflavin biosynthesis protein RibBA" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1690 GSU_1690 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4333 BA_4333 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1188 DET_1188 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0647 CBU_0647 "riboflavin biosynthesis protein RibA" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KPU3 VC_2269 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2269 VC_2269 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B0KAI2RIBBA_THEP33, ., 5, ., 4, ., 2, 50.51750.72810.9873yesno
C5D3N0RIBBA_GEOSW3, ., 5, ., 4, ., 2, 50.51500.73180.9899yesno
A6KWQ7RIBBA_BACV83, ., 5, ., 4, ., 2, 50.50620.73180.9727yesno
B0K0Y9RIBBA_THEPX3, ., 5, ., 4, ., 2, 50.52010.72810.9873yesno
C3LIX7RIBBA_BACAC3, ., 5, ., 4, ., 2, 50.52130.72990.9874yesno
Q5WH08RIBBA_BACSK3, ., 5, ., 4, ., 2, 50.52010.73180.9899yesno
C3P7P7RIBBA_BACAA3, ., 5, ., 4, ., 2, 50.52130.72990.9874yesno
Q635H0RIBBA_BACCZ3, ., 5, ., 4, ., 2, 50.52130.72990.9874yesno
Q5YTP3RIBBA_NOCFA3, ., 5, ., 4, ., 2, 50.53510.73550.9541yesno
A4QEG9RIBBA_CORGB3, ., 5, ., 4, ., 2, 50.52750.73370.9336yesno
B7IWM5RIBBA_BACC23, ., 5, ., 4, ., 2, 50.51870.72990.9874yesno
A0RIB3RIBBA_BACAH3, ., 5, ., 4, ., 2, 50.52130.72990.9874yesno
A5U2B7RIBBA_MYCTA3, ., 5, ., 4, ., 2, 50.53230.73550.9294yesno
C0ZKW2RIBBA_BREBN3, ., 5, ., 4, ., 2, 50.52630.72990.9824yesno
P0A5V0RIBBA_MYCTU3, ., 5, ., 4, ., 2, 50.53230.73550.9294yesno
P0A5V1RIBBA_MYCBO3, ., 5, ., 4, ., 2, 50.53230.73550.9294yesno
A4X639RIBBA_SALTO3, ., 5, ., 4, ., 2, 50.5450.73920.9925yesno
Q818X6RIBBA_BACCR3, ., 5, ., 4, ., 2, 50.51870.72990.9874yesno
Q81MB6RIBBA_BACAN3, ., 5, ., 4, ., 2, 50.52130.72990.9874yesno
Q9Z734RIBBA_CHLPN3, ., 5, ., 4, ., 2, 50.50370.73370.9425yesno
B7JLW6RIBBA_BACC03, ., 5, ., 4, ., 2, 50.52130.72990.9874yesno
A1KIK4RIBBA_MYCBP3, ., 5, ., 4, ., 2, 50.53230.73550.9294yesno
O66679RIBBA_AQUAE3, ., 5, ., 4, ., 2, 50.52360.73740.9753yesno
B7HAY4RIBBA_BACC43, ., 5, ., 4, ., 2, 50.51870.72990.9874yesno
C1AN60RIBBA_MYCBT3, ., 5, ., 4, ., 2, 50.53230.73550.9294yesno
B7HNM8RIBBA_BACC73, ., 5, ., 4, ., 2, 50.52010.73180.9899yesno
Q3B2I6RIBBA_PELLD3, ., 5, ., 4, ., 2, 50.50120.73370.9633yesno
Q0AXM5RIBBA_SYNWW3, ., 5, ., 4, ., 2, 50.53110.73740.9949yesno
A8LY38RIBBA_SALAI3, ., 5, ., 4, ., 2, 50.52400.76530.9785yesno
Q8NQ52RIBBA_CORGL3, ., 5, ., 4, ., 2, 50.52750.73370.9336yesno
B9IWX4RIBBA_BACCQ3, ., 5, ., 4, ., 2, 50.52010.73180.9899yesno
A9VG50RIBBA_BACWK3, ., 5, ., 4, ., 2, 50.52130.72990.9874yesno
B1MCA4RIBBA_MYCA93, ., 5, ., 4, ., 2, 50.54470.73550.9472yesno
A1T8K1RIBBA_MYCVP3, ., 5, ., 4, ., 2, 50.52730.73550.9338yesno
C1EQY5RIBBA_BACC33, ., 5, ., 4, ., 2, 50.52130.72990.9874yesno
Q0S0K2RIBBA_RHOSR3, ., 5, ., 4, ., 2, 50.53980.73550.9472yesno
C0ZZE5RIBBA_RHOE43, ., 5, ., 4, ., 2, 50.53980.73550.9316yesno
B2HP67RIBBA_MYCMM3, ., 5, ., 4, ., 2, 50.53980.73550.9294yesno
Q6HE54RIBBA_BACHK3, ., 5, ., 4, ., 2, 50.52130.72990.9874yesno
Q731I5RIBBA_BACC13, ., 5, ., 4, ., 2, 50.52010.73180.9899yesno
A7GSD5RIBBA_BACCN3, ., 5, ., 4, ., 2, 50.50620.72990.9874yesno
A0QI09RIBBA_MYCA13, ., 5, ., 4, ., 2, 50.53480.73550.9294yesno
A0PPL6RIBBA_MYCUA3, ., 5, ., 4, ., 2, 50.53730.73550.9294yesno
A4TC13RIBBA_MYCGI3, ., 5, ., 4, ., 2, 50.53230.73550.9338yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer4.1.99.120.946
3rd Layer3.5.40.963
3rd Layer4.1.990.963
3rd Layer3.5.4.250.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.I.1424.1
GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone-4-phosphate synthase (EC-3.5.4.25) (441 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.VII.325.1
6,7-dimethyl-8-ribityllumazine synthase (180 aa)
• •  •• 0.989
gw1.II.3064.1
diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC-3.5.4.26) (316 aa)
• •  •• 0.985
eugene3.01700021
6,7-dimethyl-8-ribityllumazine synthase (221 aa)
• •  •• 0.981
estExt_fgenesh4_pg.C_LG_I0458
hypothetical protein (204 aa)
     •• 0.806
eugene3.00031452
hypothetical protein (211 aa)
     •• 0.800
gw1.XVIII.1081.1
annotation not avaliable (148 aa)
     •  0.800
gw1.XVI.2051.1
annotation not avaliable (265 aa)
     •  0.800
gw1.XV.93.1
hypothetical protein (1112 aa)
     •  0.800
gw1.XV.3381.1
hypothetical protein (519 aa)
     •  0.800
gw1.XII.1350.1
hypothetical protein (612 aa)
     •  0.800

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query537
PLN02831450 PLN02831, PLN02831, Bifunctional GTP cyclohydrolas 0.0
PRK09311402 PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-b 0.0
PRK09319 555 PRK09319, PRK09319, bifunctional 3,4-dihydroxy-2-b 1e-175
cd00641193 cd00641, GTP_cyclohydro2, GTP cyclohydrolase II (R 1e-114
PRK14019367 PRK14019, PRK14019, bifunctional 3,4-dihydroxy-2-b 1e-108
PRK09318387 PRK09318, PRK09318, bifunctional 3,4-dihydroxy-2-b 1e-107
COG0807193 COG0807, RibA, GTP cyclohydrolase II [Coenzyme met 1e-96
PRK00393197 PRK00393, ribA, GTP cyclohydrolase II; Reviewed 1e-95
pfam00925169 pfam00925, GTP_cyclohydro2, GTP cyclohydrolase II 8e-94
pfam00926193 pfam00926, DHBP_synthase, 3,4-dihydroxy-2-butanone 9e-88
TIGR00505191 TIGR00505, ribA, GTP cyclohydrolase II 2e-86
COG0108203 COG0108, RibB, 3,4-dihydroxy-2-butanone 4-phosphat 2e-81
PRK12485369 PRK12485, PRK12485, bifunctional 3,4-dihydroxy-2-b 1e-78
PRK09314339 PRK09314, PRK09314, bifunctional 3,4-dihydroxy-2-b 4e-77
TIGR00506199 TIGR00506, ribB, 3,4-dihydroxy-2-butanone 4-phosph 6e-65
PRK03353217 PRK03353, ribB, 3,4-dihydroxy-2-butanone 4-phospha 7e-61
PRK08815375 PRK08815, PRK08815, GTP cyclohydrolase; Provisiona 1e-50
PRK01792214 PRK01792, ribB, 3,4-dihydroxy-2-butanone 4-phospha 1e-50
PRK00910218 PRK00910, ribB, 3,4-dihydroxy-2-butanone 4-phospha 4e-50
PRK00014230 PRK00014, ribB, 3,4-dihydroxy-2-butanone 4-phospha 1e-40
PRK05773219 PRK05773, PRK05773, 3,4-dihydroxy-2-butanone 4-pho 1e-13
PRK07198418 PRK07198, PRK07198, hypothetical protein; Validate 4e-08
>gnl|CDD|215445 PLN02831, PLN02831, Bifunctional GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone-4-phosphate synthase Back     alignment and domain information 
 Score =  866 bits (2240), Expect = 0.0
 Identities = 344/449 (76%), Positives = 389/449 (86%)

Query: 80  SAPFGTVDAEITPETIDFFVSDAEGDPDCPTEGFSSIEQALNTLRQGKFVIVVEDENGDV 139
           SA FGT+ AEITP T DFFVSDAEGDPD PTEGFSSI +AL  +RQGKFV+VV+DE+ + 
Sbjct: 2   SASFGTLAAEITPTTDDFFVSDAEGDPDRPTEGFSSIAEALEDIRQGKFVVVVDDEDREN 61

Query: 140 EGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSSAPTFTI 199
           EG+L+MAASL +P  +AF+VKHGSGIV V MK EDL RL LPLM P  ENE+  A  FT+
Sbjct: 62  EGDLIMAASLVTPEAMAFLVKHGSGIVCVSMKGEDLDRLRLPLMVPSKENEEKMATAFTV 121

Query: 200 TVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVLRRAGHTEAS 259
           TVDAK GTTTGVSASDRAKT+LAL+SPDSKPE+FRRPGH+FPL+YR GGVL+RAGHTEA+
Sbjct: 122 TVDAKHGTTTGVSASDRAKTILALASPDSKPEDFRRPGHIFPLRYREGGVLKRAGHTEAA 181

Query: 260 VDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISSIIDLIRYRRKRETIV 319
           VDL VLAGL PV VL  +V+ EDGSM+ LP LRK A EH + I SI DLIRYRRKRE +V
Sbjct: 182 VDLAVLAGLPPVGVLCEIVNDEDGSMARLPQLRKFAEEHGLKIISIADLIRYRRKREKLV 241

Query: 320 ERTAISRLPTKWGLFQAYCYRSKLDGTDHVAVVKGNMGNGQDVLVRVHSECLTGDIFGSA 379
           ERTA++RLPTKWGLF AYCYRSKLDG +H+A VKG++G+GQDVLVRVHSECLTGDIFGSA
Sbjct: 242 ERTAVARLPTKWGLFTAYCYRSKLDGIEHIAFVKGDIGDGQDVLVRVHSECLTGDIFGSA 301

Query: 380 RCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELG 439
           RCDCGNQL LAMQ+IEKAG+GV+VYLRGHEGRGIGLGHKLRAYNLQD+G DTV+AN ELG
Sbjct: 302 RCDCGNQLALAMQLIEKAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDEGRDTVEANEELG 361

Query: 440 LAVDAREYGIGAQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPILTPITEENKRY 499
           L VD+REYGIGAQILRDLGVRTMRLMTNNPAK+ GLKGYGLAV+GRVP+LTPIT+ENKRY
Sbjct: 362 LPVDSREYGIGAQILRDLGVRTMRLMTNNPAKYTGLKGYGLAVVGRVPLLTPITKENKRY 421

Query: 500 LETKRTKMGHIYGSDLQGPLFGSTVNNIE 528
           LETKRTKMGH+YGSDL G + G       
Sbjct: 422 LETKRTKMGHVYGSDLGGHVSGLESAETN 450

Length = 450
>gnl|CDD|181774 PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>gnl|CDD|236465 PRK09319, PRK09319, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein; Provisional Back     alignment and domain information
>gnl|CDD|238348 cd00641, GTP_cyclohydro2, GTP cyclohydrolase II (RibA) Back     alignment and domain information
>gnl|CDD|237587 PRK14019, PRK14019, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional Back     alignment and domain information
>gnl|CDD|236464 PRK09318, PRK09318, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>gnl|CDD|223878 COG0807, RibA, GTP cyclohydrolase II [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|234745 PRK00393, ribA, GTP cyclohydrolase II; Reviewed Back     alignment and domain information
>gnl|CDD|216196 pfam00925, GTP_cyclohydro2, GTP cyclohydrolase II Back     alignment and domain information
>gnl|CDD|216197 pfam00926, DHBP_synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase Back     alignment and domain information
>gnl|CDD|129596 TIGR00505, ribA, GTP cyclohydrolase II Back     alignment and domain information
>gnl|CDD|223186 COG0108, RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|171535 PRK12485, PRK12485, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional Back     alignment and domain information
>gnl|CDD|181775 PRK09314, PRK09314, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>gnl|CDD|232999 TIGR00506, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Back     alignment and domain information
>gnl|CDD|235119 PRK03353, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|236340 PRK08815, PRK08815, GTP cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|167278 PRK01792, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|179162 PRK00910, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|134031 PRK00014, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|235601 PRK05773, PRK05773, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Validated Back     alignment and domain information
>gnl|CDD|235959 PRK07198, PRK07198, hypothetical protein; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 537
PLN02831450 Bifunctional GTP cyclohydrolase II/ 3,4-dihydroxy- 100.0
PRK09319 555 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK09311402 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK09318387 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK12485369 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK14019367 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK09314339 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK08815375 GTP cyclohydrolase; Provisional 100.0
COG0108203 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
PRK00910218 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
PRK01792214 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
PRK00014230 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
TIGR00506199 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
KOG1284357 consensus Bifunctional GTP cyclohydrolase II/3,4-d 100.0
PF00926194 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphat 100.0
PRK03353217 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
PRK05773219 3,4-dihydroxy-2-butanone 4-phosphate synthase; Val 100.0
COG0807193 RibA GTP cyclohydrolase II [Coenzyme metabolism] 100.0
PRK00393197 ribA GTP cyclohydrolase II; Reviewed 100.0
TIGR00505191 ribA GTP cyclohydrolase II. Several members of the 100.0
PF00925169 GTP_cyclohydro2: GTP cyclohydrolase II; InterPro: 100.0
cd00641193 GTP_cyclohydro2 GTP cyclohydrolase II (RibA). GTP 100.0
PRK07198418 hypothetical protein; Validated 100.0
KOG1284357 consensus Bifunctional GTP cyclohydrolase II/3,4-d 99.59
KOG3009 614 consensus Predicted carbohydrate kinase, contains 83.66
>PLN02831 Bifunctional GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone-4-phosphate synthase Back     alignment and domain information 
Probab=100.00  E-value=1.5e-140  Score=1119.27  Aligned_cols=443  Identities=78%  Similarity=1.233  Sum_probs=433.2

Q ss_pred             CCCCccccccccCcccccccccCCCCCCCCCCCCCccHHHHHHHHHCCCEEEEEeCCCCCceeEEEEEcCCCCHHHHHHH
Q 009355           79 VSAPFGTVDAEITPETIDFFVSDAEGDPDCPTEGFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFM  158 (537)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~Ai~alr~G~~VvV~Dde~rE~EgdLv~aAe~~T~e~vaFm  158 (537)
                      ++++||||+++|+|++++||.++.+.+++.+++.|++|++||++||+|+||||+||++||||||||+|||.+|+|.||||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~ai~~lr~G~~Viv~Dd~~rEnegdLv~aAe~~t~e~v~fm   80 (450)
T PLN02831          1 DSASFGTLAAEITPTTDDFFVSDAEGDPDRPTEGFSSIAEALEDIRQGKFVVVVDDEDRENEGDLIMAASLVTPEAMAFL   80 (450)
T ss_pred             CCccccccccCCcccccccccccccccccCcccccCcHHHHHHHHHCCCeEEEEeCCCCCCceeEEEEchhCCHHHHHHH
Confidence            47899999999999999999999999999997789999999999999999999999999999999999999999999999


Q ss_pred             HHhCCceEEeecCHHHHHhcCCCCCCCCCCCCCCCCCceEEeeeccCCCccCCChhhHHHHHHHHcCCCCCCCCccCCCC
Q 009355          159 VKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSSAPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGH  238 (537)
Q Consensus       159 ~r~~~Glicvam~~~~~~rL~Lp~m~~~~~n~~~~~taFtVsVDa~~gttTGISA~DRA~TIr~LAdp~s~p~Df~rPGH  238 (537)
                      ++|++|+||+||++++|++|+||+|++...|.+..+++|||||||++|++|||||.|||+|||+||+|.++|+||++|||
T Consensus        81 ~~~~~GliC~~lt~~ra~~L~Lp~m~~~~~n~~~~~t~ftvsVd~~~g~~TGISa~dRa~Tir~lad~~~~~~df~~PGH  160 (450)
T PLN02831         81 VKHGSGIVCVSMKGEDLDRLRLPLMVPSKENEEKMATAFTVTVDAKHGTTTGVSASDRAKTILALASPDSKPEDFRRPGH  160 (450)
T ss_pred             HHhCCCceEEecCHHHHhhcCCCcccccccCCcccCCCceEEEecCCCcccccchHHHHHHHHHHhCcCCChhhcCCCCc
Confidence            99999999999999999999999999865577778899999999999999999999999999999999999999999999


Q ss_pred             CccceeccCCccccCchhHHHHHHHHHcCCCCeEEEEEecCCCCCCCCChHHHHHHHHHcCCCEEeehhHHHHHhhccch
Q 009355          239 VFPLKYRNGGVLRRAGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLRKLALEHSIPISSIIDLIRYRRKRETI  318 (537)
Q Consensus       239 VfPL~a~~GGvl~R~GhTEAaVdLarlAGl~PaaVi~elv~~~dG~ma~~~~l~~fA~~h~L~ivsi~dLi~yr~~~E~l  318 (537)
                      ||||++++|||++|+|||||||||||||||.|+|||||||+++||+||+.+++++||++|+||+++|+|||+||+++|++
T Consensus       161 vfPL~a~~ggvl~R~GhtEaavdLarlAgl~Paavi~Ei~~~~dG~m~~~~~~~~fA~~h~L~~v~i~dli~yr~~~e~l  240 (450)
T PLN02831        161 IFPLRYREGGVLKRAGHTEAAVDLAVLAGLPPVGVLCEIVNDEDGSMARLPQLRKFAEEHGLKIISIADLIRYRRKREKL  240 (450)
T ss_pred             ccceeecccCccCCCChHHHHHHHHHHcCCCceEEEEEeccCCCCCccChHHHHHHHHHcCCcEEEHHHHHHHHhhcccc
Confidence            99999999999999999999999999999999999999999558999999999999999999999999999999999999


Q ss_pred             hhccccccccCCceeEEEEEEEeCCCCceEEEEEEccCCCCCcceEEEcccCcccccccCCCCCChHHHHHHHHHHHHcC
Q 009355          319 VERTAISRLPTKWGLFQAYCYRSKLDGTDHVAVVKGNMGNGQDVLVRVHSECLTGDIFGSARCDCGNQLDLAMQIIEKAG  398 (537)
Q Consensus       319 Ver~a~~~LpT~~G~F~~~~Yr~~~dg~EHlALv~Gdi~~~~~vLVRVHSeCltgDvfgS~~CDCg~qL~~AL~~I~~~G  398 (537)
                      |+++++.+|||.||.|++++|++..++.||+|||+|++..++||||||||+|+|||+|||.+|||+|||+.||++|+++|
T Consensus       241 V~rv~~~~lpT~~G~F~~~~yr~~~~g~eHlALv~Gd~~~~~~vLVRVHSec~tgDvfgs~rCdCg~qL~~Al~~I~~~G  320 (450)
T PLN02831        241 VERTAVARLPTKWGLFTAYCYRSKLDGIEHIAFVKGDIGDGQDVLVRVHSECLTGDIFGSARCDCGNQLALAMQLIEKAG  320 (450)
T ss_pred             ccccceeeeecCCCCEEEEEEEeCCCCeEEEEEEeCCcCCCCCceEEEeccCCHHHHhcCCCCCCcchHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             CEEEEEEeCCCCCCcchhhhhhhhhhcccCCcchhhhhhcCCcccccchhHHHHHHHHcCCCeeeeccCCcccccccccC
Q 009355          399 KGVVVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILRDLGVRTMRLMTNNPAKFIGLKGY  478 (537)
Q Consensus       399 ~GVLVYLr~qEGRGiGL~~Kl~ay~Lqd~G~DTveAn~~lG~~~D~RdYgigAQILrdLGV~kIrLLTNNP~K~~aL~g~  478 (537)
                      +|||||||+|||||+||.+|+++|.+|++|+||++||.++|++.|.|+||+|||||++|||++||||||||.|+.+|++|
T Consensus       321 ~GVlvYLr~qegrgigl~~Kl~ay~lq~~g~dt~eAn~~lg~~~D~RdygigAqIL~dLGI~~irLLTNNp~K~~~L~~~  400 (450)
T PLN02831        321 RGVLVYLRGHEGRGIGLGHKLRAYNLQDEGRDTVEANEELGLPVDSREYGIGAQILRDLGVRTMRLMTNNPAKYTGLKGY  400 (450)
T ss_pred             CEEEEEEcCCCcccchHHHHHHHHhcccccCcchhhhhhccCcccceehHHHHHHHHHcCCCEEEECCCCHHHHHHHhhC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcEEEEEeecCCCCChhHHHHHHHHhhhcCCccCCCCCCCccC
Q 009355          479 GLAVIGRVPILTPITEENKRYLETKRTKMGHIYGSDLQGPLFG  521 (537)
Q Consensus       479 GIeV~ervpl~~~~~~~n~~YL~tK~~k~gH~~~~~~~~~~~~  521 (537)
                      ||+|++++|++++++++|++||+||++||||++..++.|++++
T Consensus       401 GieVve~vp~~~~~~~~n~~Yl~tK~~k~gH~l~~~~~~~~~~  443 (450)
T PLN02831        401 GLAVVGRVPLLTPITKENKRYLETKRTKMGHVYGSDLGGHVSG  443 (450)
T ss_pred             CCEEEEEecccCCCChhhHHHHHHHHHHhCCcCCCCCCCcccc
Confidence            9999999999999999999999999999999999999998875

>PRK09319 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein; Provisional Back     alignment and domain information
>PRK09311 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>PRK09318 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>PRK12485 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional Back     alignment and domain information
>PRK14019 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional Back     alignment and domain information
>PRK09314 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>PRK08815 GTP cyclohydrolase; Provisional Back     alignment and domain information
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism] Back     alignment and domain information
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase Back     alignment and domain information
>KOG1284 consensus Bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2butanone-4-phosphate synthase [Coenzyme transport and metabolism] Back     alignment and domain information
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4 Back     alignment and domain information
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>PRK05773 3,4-dihydroxy-2-butanone 4-phosphate synthase; Validated Back     alignment and domain information
>COG0807 RibA GTP cyclohydrolase II [Coenzyme metabolism] Back     alignment and domain information
>PRK00393 ribA GTP cyclohydrolase II; Reviewed Back     alignment and domain information
>TIGR00505 ribA GTP cyclohydrolase II Back     alignment and domain information
>PF00925 GTP_cyclohydro2: GTP cyclohydrolase II; InterPro: IPR000926 GTP cyclohydrolase II catalyses the first committed step in the biosynthesis of riboflavin Back     alignment and domain information
>cd00641 GTP_cyclohydro2 GTP cyclohydrolase II (RibA) Back     alignment and domain information
>PRK07198 hypothetical protein; Validated Back     alignment and domain information
>KOG1284 consensus Bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2butanone-4-phosphate synthase [Coenzyme transport and metabolism] Back     alignment and domain information
>KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query537
2bz0_A196 Crystal Structure Of E. Coli Gtp Cyclohydrolase Ii 2e-45
2bz1_A196 Crystal Structure Of Apo E. Coli Gtp Cyclohydrolase 2e-44
3mgz_A206 Crystal Structure Of Dhbps Domain Of Bi-Functional 4e-43
3mk5_A212 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 5e-43
3lqu_A217 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 3e-42
1iez_A217 Solution Structure Of 3,4-Dihydroxy-2-Butanone 4-Ph 3e-42
1g57_A217 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 4e-42
1tks_A204 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 2e-40
3h07_A220 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 3e-40
1k49_A233 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 1e-34
1pvw_A227 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase From 2e-16
1pvy_A227 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase From 3e-15
>pdb|2BZ0|A Chain A, Crystal Structure Of E. Coli Gtp Cyclohydrolase Ii In Complex With Gtp Analogue, Gmpcpp, And Zinc Length = 196 Back     alignment and structure 
Iteration: 1

 Score =  180 bits (456), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 91/192 (47%), Positives = 126/192 (65%), Gaps = 1/192 (0%)
Query: 319 VERTAISRLPTKWGLFQAYCYRSKLDGTDHVAVVKGNMGNGQDVLVRVHSECLTGDIFGS 378
           ++R A ++LPT WG F    +     G DHVA+V G++     VL RVHSECLTGD   S
Sbjct: 3   LKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFS 62
Query: 379 ARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIEL 438
            RCDCG QL+ A+  I + G+G+++Y R  EGR IGL +K+RAY LQDQG+DTV+AN +L
Sbjct: 63  LRCDCGFQLEAALTQIAEEGRGILLYHR-QEGRNIGLLNKIRAYALQDQGYDTVEANHQL 121
Query: 439 GLAVDAREYGIGAQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPILTPITEENKR 498
           G A D R++ + A + + LGV  +RL+TNNP K   L   G+ ++ RVP++      N+ 
Sbjct: 122 GFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNEH 181
Query: 499 YLETKRTKMGHI 510
           YL+TK  KMGH+
Sbjct: 182 YLDTKAEKMGHL 193
>pdb|2BZ1|A Chain A, Crystal Structure Of Apo E. Coli Gtp Cyclohydrolase Ii Length = 196 Back     alignment and structure
>pdb|3MGZ|A Chain A, Crystal Structure Of Dhbps Domain Of Bi-Functional DhbpsGTP Cyclohydrolase Ii From Mycobacterium Tuberculosis At Ph 4.0 Length = 206 Back     alignment and structure
>pdb|3MK5|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase Domain From Mycobacterium Tuberculosis With Sulfate And Zinc At Ph 4.00 Length = 212 Back     alignment and structure
>pdb|3LQU|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase Complexed With Ribulose-5 Phosphate Length = 217 Back     alignment and structure
>pdb|1IEZ|A Chain A, Solution Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase Of Riboflavin Biosynthesis Length = 217 Back     alignment and structure
>pdb|1G57|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase Length = 217 Back     alignment and structure
>pdb|1TKS|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase Of Candida Albicans Length = 204 Back     alignment and structure
>pdb|3H07|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase From Yersinia Pestis Co92 Length = 220 Back     alignment and structure
>pdb|1K49|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase (Cation Free Form) Length = 233 Back     alignment and structure
>pdb|1PVW|A Chain A, 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase From M. Jannaschii Length = 227 Back     alignment and structure
>pdb|1PVY|A Chain A, 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase From M. Jannaschii In Complex With Ribulose 5-Phosphate Length = 227 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query537
2bz1_A196 GTP cyclohydrolase II; riboflavin biosynthesis, ca 1e-129
1tks_A204 3,4-dihydroxy-2-butanone 4-phosphate synthase; rib 2e-97
3mio_A206 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 6e-96
1g57_A217 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 8e-95
1k4i_A233 3,4-dihydroxy-2-butanone 4-phosphate synthase; rib 3e-94
1snn_A227 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 3e-84
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A Length = 196 Back     alignment and structure
 Score =  374 bits (963), Expect = e-129
 Identities = 91/192 (47%), Positives = 126/192 (65%), Gaps = 1/192 (0%)

Query: 319 VERTAISRLPTKWGLFQAYCYRSKLDGTDHVAVVKGNMGNGQDVLVRVHSECLTGDIFGS 378
           ++R A ++LPT WG F    +     G DHVA+V G++     VL RVHSECLTGD   S
Sbjct: 3   LKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFS 62

Query: 379 ARCDCGNQLDLAMQIIEKAGKGVVVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVQANIEL 438
            RCDCG QL+ A+  I + G+G+++Y R  EGR IGL +K+RAY LQDQG+DTV+AN +L
Sbjct: 63  LRCDCGFQLEAALTQIAEEGRGILLYHR-QEGRNIGLLNKIRAYALQDQGYDTVEANHQL 121

Query: 439 GLAVDAREYGIGAQILRDLGVRTMRLMTNNPAKFIGLKGYGLAVIGRVPILTPITEENKR 498
           G A D R++ + A + + LGV  +RL+TNNP K   L   G+ ++ RVP++      N+ 
Sbjct: 122 GFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNEH 181

Query: 499 YLETKRTKMGHI 510
           YL+TK  KMGH+
Sbjct: 182 YLDTKAEKMGHL 193
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A* Length = 204 Back     alignment and structure
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} PDB: 3mgz_A 3mk5_A Length = 206 Back     alignment and structure
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A Length = 217 Back     alignment and structure
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A Length = 233 Back     alignment and structure
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A Length = 227 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query537
1k4i_A233 3,4-dihydroxy-2-butanone 4-phosphate synthase; rib 100.0
3mio_A206 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 100.0
1tks_A204 3,4-dihydroxy-2-butanone 4-phosphate synthase; rib 100.0
1snn_A227 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 100.0
1g57_A217 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 100.0
2bz1_A196 GTP cyclohydrolase II; riboflavin biosynthesis, ca 100.0
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A Back     alignment and structure
Probab=100.00  E-value=7.8e-78  Score=588.41  Aligned_cols=209  Identities=38%  Similarity=0.637  Sum_probs=201.3

Q ss_pred             CCCCccHHHHHHHHHCCCEEEEEeCCCCCceeEEEEEcCCCCHHHHHHHHHhCCceEEeecCHHHHHhcCCCCCCCCCCC
Q 009355          110 TEGFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAEN  189 (537)
Q Consensus       110 ~~~~~~I~~Ai~alr~G~~VvV~Dde~rE~EgdLv~aAe~~T~e~vaFm~r~~~Glicvam~~~~~~rL~Lp~m~~~~~n  189 (537)
                      .+.|++|++||++||+|+||||+||++||||||||+||+++|||.||||+||++|+||+||++++|++|+||+|+..  |
T Consensus         9 ~~~~~~ie~Ai~alr~G~~Viv~DdedREnEgDLi~aAe~~T~e~i~fm~r~~~GliC~~lt~e~~~~L~Lp~Mv~~--n   86 (233)
T 1k4i_A            9 KSNFDAIPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTH--N   86 (233)
T ss_dssp             ---CCCHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSS--C
T ss_pred             CCchhHHHHHHHHHHCCCeEEEEeCCCCCcceeEEEEhhhCCHHHHHHHHHcCCCCEEEEcCHHHHhhCCCcccccc--c
Confidence            35699999999999999999999999999999999999999999999999999999999999999999999999998  8


Q ss_pred             CCCCCCceEEeeeccC-CCccCCChhhHHHHHHHHcCCCCCCCCccCCCCCccceeccCCccccCchhHHHHHHHHHcCC
Q 009355          190 EDSSAPTFTITVDAKF-GTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVLRRAGHTEASVDLLVLAGL  268 (537)
Q Consensus       190 ~~~~~taFtVsVDa~~-gttTGISA~DRA~TIr~LAdp~s~p~Df~rPGHVfPL~a~~GGvl~R~GhTEAaVdLarlAGl  268 (537)
                      ++.++|+|||||||++ |++|||||+|||+|||+|++|+++|+||+||||||||+|++||||+|+|||||||||||||||
T Consensus        87 ~~~~~TaFTVsVda~~~g~tTGISA~DRa~Tir~la~~~~~p~df~rPGHvfPL~A~~GGVl~R~GHTEAaVDLarLAGl  166 (233)
T 1k4i_A           87 ADPRGTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGK  166 (233)
T ss_dssp             CCSSCCCBBCCEEECSTTCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEECCTTHHHHCCSHHHHHHHHHHHTTC
T ss_pred             CCCCCCCeEEEEEcccCCCCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCccceeeecCCCeeccCChHHHHHHHHHHcCC
Confidence            8899999999999998 999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEEEecCCC----------CCCCCChHHHHHHHHHcCCCEEeehhHHHHHhhccchhh
Q 009355          269 NPVSVLSAVVDPE----------DGSMSSLPSLRKLALEHSIPISSIIDLIRYRRKRETIVE  320 (537)
Q Consensus       269 ~PaaVi~elv~~~----------dG~ma~~~~l~~fA~~h~L~ivsi~dLi~yr~~~E~lVe  320 (537)
                      .|++||||||+++          ||+|||++++++||++||||++||+|||+||+++|++|+
T Consensus       167 ~PagVicEi~~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iitI~dLi~yr~~~e~~v~  228 (233)
T 1k4i_A          167 RPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCTIEDMIAHVEKTEGKLE  228 (233)
T ss_dssp             CSBEEEEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEEHHHHHHHHHHHHCCC-
T ss_pred             CceEEEEEeCCCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHHhcCCeec
Confidence            9999999999863          699999999999999999999999999999999998875
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A Back     alignment and structure
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A* Back     alignment and structure
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A Back     alignment and structure
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A Back     alignment and structure
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 537
d1tksa_202 d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphat 3e-61
d2bz1a1174 c.144.1.1 (A:1-174) GTP cyclohydrolase II, RibA {E 2e-60
d1g57a_209 d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphat 3e-60
d1k4ia_216 d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphat 6e-59
d1snna_219 d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphat 1e-58
>d1tksa_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Candida albicans [TaxId: 5476]} Length = 202 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: YrdC/RibB
superfamily: YrdC/RibB
family: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
domain: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
species: Candida albicans [TaxId: 5476]

 Score =  198 bits (505), Expect = 3e-61
 Identities = 86/202 (42%), Positives = 124/202 (61%), Gaps = 2/202 (0%)

Query: 113 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKE 172
           F+ IE+AL   + G+F+IV++DE+ + EG+L+MAA L +   +AF+V++ SG V V + E
Sbjct: 3   FTPIEEALEAYKNGEFLIVMDDEDRENEGDLIMAAELITQEKMAFLVRYSSGYVCVPLSE 62

Query: 173 EDLQRLNLPLMSPEAENEDSSAPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPEN 232
           E   +L LP M       D     +TIT D   GTTTG+SA DRA T  +L++P+SKP++
Sbjct: 63  ERANQLELPPMLAN--RSDRHGTAYTITCDFAEGTTTGISAHDRALTTRSLANPNSKPQD 120

Query: 233 FRRPGHVFPLKYRNGGVLRRAGHTEASVDLLVLAGLNPVSVLSAVVDPEDGSMSSLPSLR 292
           F +PGH+ PL+   G + +R GHTEA+V L  LAGL P  V+  +V  EDG M  L    
Sbjct: 121 FIKPGHILPLRAVPGLLKKRRGHTEAAVQLSTLAGLQPAGVICELVRDEDGLMMRLDDCI 180

Query: 293 KLALEHSIPISSIIDLIRYRRK 314
           +   +H I I +I  L+ Y  K
Sbjct: 181 QFGKKHGIKIININQLVEYISK 202
>d2bz1a1 c.144.1.1 (A:1-174) GTP cyclohydrolase II, RibA {Escherichia coli [TaxId: 562]} Length = 174 Back     information, alignment and structure
>d1g57a_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Escherichia coli [TaxId: 562]} Length = 209 Back     information, alignment and structure
>d1k4ia_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Magnaporthe grisea [TaxId: 148305]} Length = 216 Back     information, alignment and structure
>d1snna_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]} Length = 219 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query537
d1g57a_209 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHB 100.0
d1tksa_202 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHB 100.0
d1k4ia_216 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHB 100.0
d1snna_219 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHB 100.0
d2bz1a1174 GTP cyclohydrolase II, RibA {Escherichia coli [Tax 100.0
>d1g57a_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: YrdC/RibB
superfamily: YrdC/RibB
family: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
domain: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.1e-73  Score=548.69  Aligned_cols=202  Identities=41%  Similarity=0.735  Sum_probs=193.8

Q ss_pred             CCccHHHHHHHHHCCCEEEEEeCCCCCceeEEEEEcCCCCHHHHHHHHHhCCceEEeecCHHHHHhcCCCCCCCCCCCCC
Q 009355          112 GFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENED  191 (537)
Q Consensus       112 ~~~~I~~Ai~alr~G~~VvV~Dde~rE~EgdLv~aAe~~T~e~vaFm~r~~~Glicvam~~~~~~rL~Lp~m~~~~~n~~  191 (537)
                      .|++|++||++||+|+||||+||++||||||||++|+.+|+|.|+||+||++|+||+||++++|++|+||+|+..  |.+
T Consensus         8 ~~~~ie~ai~alk~G~~Viv~Dd~~RE~EgDlv~~Ae~~t~e~i~fm~~~~~GliC~a~~~~~~~~L~Lp~m~~~--~~~   85 (209)
T d1g57a_           8 PFERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTS   85 (209)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEC----CCCEEEEEETTTCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSS--CCC
T ss_pred             chhhHHHHHHHHHCCCEEEEEECCCCCCcccEEEEHHHCCHHHHHHHHHhCCCCEEEcccHHHHhcCCCCCcccc--ccc
Confidence            478999999999999999999999999999999999999999999999999999999999999999999999987  778


Q ss_pred             CCCCceEEeeeccCCCccCCChhhHHHHHHHHcCCCCCCCCccCCCCCccceeccCCccccCchhHHHHHHHHHcCCCCe
Q 009355          192 SSAPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVLRRAGHTEASVDLLVLAGLNPV  271 (537)
Q Consensus       192 ~~~taFtVsVDa~~gttTGISA~DRA~TIr~LAdp~s~p~Df~rPGHVfPL~a~~GGvl~R~GhTEAaVdLarlAGl~Pa  271 (537)
                      .++++||||||+++|++|||||.|||+|||.|++++++|+||++|||||||++++|||++|+||||||||||+|||+.|+
T Consensus        86 ~~~~~ftvsvd~~~g~tTGISa~dRa~Tir~l~~~~~~~~df~~PGHv~pL~a~~gGv~~R~GHTEaavdL~~lAGl~P~  165 (209)
T d1g57a_          86 AYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA  165 (209)
T ss_dssp             TTCCCBBSCEEESSSCSSSCSHHHHHHHHHHHHSTTCCGGGEEEEEEEEEEECCTTGGGTCCSHHHHHHHHHHHTTSCSC
T ss_pred             ccCCcceEEEEecCCccccccHHHHHHHHHHhhccCCCHHHhcCCceeceeeeccCCccccchHHHHHHHHHHhcCCCCe
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEecCCCCCCCCChHHHHHHHHHcCCCEEeehhHHHHHhhcc
Q 009355          272 SVLSAVVDPEDGSMSSLPSLRKLALEHSIPISSIIDLIRYRRKRE  316 (537)
Q Consensus       272 aVi~elv~~~dG~ma~~~~l~~fA~~h~L~ivsi~dLi~yr~~~E  316 (537)
                      |||||||++ +|+||+.+++++||++|+||+|+|+|||+||+++|
T Consensus       166 avi~Eil~~-dG~~~~~~~~~~fA~~~~l~~isi~dli~yr~~~e  209 (209)
T d1g57a_         166 GVLCELTND-DGTMARAPECIEFANKHNMALVTIEDLVAYRQAHE  209 (209)
T ss_dssp             EEEEEBBCT-TSSBCCHHHHHHHHHHTTCEEEEHHHHHHHHHHHC
T ss_pred             EEEEEEecC-CCcccCHHHHHHHHHHcCCCEEEHHHHHHHHHhcC
Confidence            999999998 99999999999999999999999999999999875
>d1tksa_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Candida albicans [TaxId: 5476]} Back     information, alignment and structure
>d1k4ia_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Magnaporthe grisea [TaxId: 148305]} Back     information, alignment and structure
>d1snna_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2bz1a1 c.144.1.1 (A:1-174) GTP cyclohydrolase II, RibA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure