Citrus Sinensis ID: 009358

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------
MGASLLPSSLAILCVWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGD
cccccHHHHHHHHHHHHHHHHccccccccEEEEEEEEEEEEEcccccEEEEEEcccccccEEEEEEccEEEEEEEEcccccEEEEEccccccccccccccccccccccccccEEEEEEEEccccccEEccccccccccccccEEEEcccccccccccccccEEEEEEcccccccHHHHHHHHHHccccccccccEEEccccccccccccccEEEEEEEcccEEEEEEEEEcccccEEEEEcccEEEEEEEcccEEcEEEEEEEEEccccEEEEEEEccccccccEEEEEEEcccccccccccccEEEEEEEcccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccEEEEEEEEcccccccccccccccccccEEEEEEcccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEEccccEEEEEEEccccccccccccccccccEEEEEEcccccccccccccccccccccccEEEEccccEEEEEEEcccccc
ccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEcEEEccccccEEEEcccccccEEEEEcccEEEEEEEEcccccEcEEEEcccccccHHHcccEcccEccEccccEEEEEEEcccccEEEEEEEcccHHHHHHcccEEEEcccccccccccccccEEEEEEccccccHHHHHHHHHHccccccccccEEEcccccccccccccccEEEEEcccHHHHHHHHHHHHcHHHHHHHHcccEEEEEEEEEEEccccEEEEEEcccccEEEEEEccccccccEEEEEEEcccccccccccccEEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccEEEEEEEcccccccccccccccccccEEEEEEcccEEccccHHHHHHHHccccccccccccccccccEccccccccccccccccEEEEEEcccEEEEEEEcccEEccccccEEEcccEEEEEEccccccccHHHHHHcccccccEEcEEEEcccEEEEEEEEccccEc
MGASLLPSSLAILCVWFLFPAGLAVASITRHYkfdikmqnvtrlchtksiitvngqfpgprivaregDRLIIKVVNhvpnnisiHWHGIRQLlsgwadgpayitqcpiqtgqsyvyNFTISGQRGTLFWHAHISWLRATvygplvifpkrgvpypfpkpykevpiifgewfnADTEAIINQslqtgagpnvsdaytinglpgplyncsakdtfklkvkpgkTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQtdillitpgqttnillkakpsypnatflmsarpyatgqgtfdnstvagileyeapakfprsstvsikklplmkptlpalndtafAFNYTTRLRSLanaqfpanvpqtvNKRFFFTvglgtnpcpknqtcqgpnnstkfaasvnnfsfilpsTALLQAhffgqngvyttdfpstplikfnytgtppnntsvmngtkVVVLPFNASVELVMQdtstlgaeshplhlhgfnffvigqgfgnydpskdrknfnlidpverntvgvpsggwvairfradnpgd
MGASLLPSSLAILCVWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKsiitvngqfpgpRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPverntvgvpsggwvairfradnpgd
MGASLLPSSLAILCVWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGD
********SLAILCVWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTC*****STKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFR******
*********LAILCVWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAK************PLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPG*
MGASLLPSSLAILCVWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGD
*GASLLPSSLAILCVWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPA***********KLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADN***
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGASLLPSSLAILCVWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query537 2.2.26 [Sep-21-2011]
Q9FJD5577 Laccase-17 OS=Arabidopsis yes no 0.977 0.909 0.741 0.0
Q5N9X2579 Laccase-4 OS=Oryza sativa yes no 0.944 0.875 0.731 0.0
O81081573 Laccase-2 OS=Arabidopsis no no 0.968 0.907 0.694 0.0
Q0DHL2574 Laccase-12/13 OS=Oryza sa no no 0.970 0.907 0.700 0.0
Q10ND7578 Laccase-10 OS=Oryza sativ no no 0.936 0.870 0.713 0.0
Q0DHL5540 Putative laccase-11 OS=Or no no 0.916 0.911 0.636 0.0
Q5N9W4547 Putative laccase-5 OS=Ory no no 0.877 0.861 0.607 0.0
Q0IQU1564 Laccase-22 OS=Oryza sativ no no 0.951 0.906 0.568 1e-180
O80434558 Laccase-4 OS=Arabidopsis no no 0.940 0.905 0.568 1e-173
Q8VZA1557 Laccase-11 OS=Arabidopsis no no 0.947 0.913 0.554 1e-167
>sp|Q9FJD5|LAC17_ARATH Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1 Back     alignment and function desciption
 Score =  828 bits (2138), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/531 (74%), Positives = 456/531 (85%), Gaps = 6/531 (1%)

Query: 10  LAILCVWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDR 69
           LA+     L P       ITRHY  +IKMQNVTRLCHTKS+++VNGQFPGP+++AREGD+
Sbjct: 7   LAVFSCVLLLPQ--PAFGITRHYTLEIKMQNVTRLCHTKSLVSVNGQFPGPKLIAREGDQ 64

Query: 70  LIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFW 129
           ++IKVVN VPNNIS+HWHGIRQL SGWADGPAYITQCPIQTGQSYVYN+TI GQRGTL++
Sbjct: 65  VLIKVVNQVPNNISLHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNYTIVGQRGTLWY 124

Query: 130 HAHISWLRATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQTGAGP 189
           HAHISWLR+TVYGPL+I PKRGVPYPF KP+KEVP+IFGEWFNADTEAII Q+ QTG GP
Sbjct: 125 HAHISWLRSTVYGPLIILPKRGVPYPFAKPHKEVPMIFGEWFNADTEAIIRQATQTGGGP 184

Query: 190 NVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVD 249
           NVSDAYTINGLPGPLYNCSAKDTF+L+VKPGKTYLLRLINAALNDELFFSIANH+VTVV+
Sbjct: 185 NVSDAYTINGLPGPLYNCSAKDTFRLRVKPGKTYLLRLINAALNDELFFSIANHTVTVVE 244

Query: 250 VDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGIL 309
            DAIY+K F+T+ +LI PGQTTN+LLK K SYP+A+F M+ARPY TGQGTFDNSTVAGIL
Sbjct: 245 ADAIYVKPFETETILIAPGQTTNVLLKTKSSYPSASFFMTARPYVTGQGTFDNSTVAGIL 304

Query: 310 EYEAPAKFPRS-STVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVN 368
           EYE P +   + S  SIK L L KP LPALNDT FA  ++ +LRSL +  FPANVP  V+
Sbjct: 305 EYEPPKQTKGAHSRTSIKNLQLFKPILPALNDTNFATKFSNKLRSLNSKNFPANVPLNVD 364

Query: 369 KRFFFTVGLGTNPC--PKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQ-NGVY 425
           ++FFFTVGLGTNPC    NQTCQGP N+T FAAS++N SF +P+ ALLQ+H+ GQ +GVY
Sbjct: 365 RKFFFTVGLGTNPCNHKNNQTCQGPTNTTMFAASISNISFTMPTKALLQSHYSGQSHGVY 424

Query: 426 TTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHG 485
           +  FP +P++ FNYTGTPPNNT V NGT ++VLP+N SVELVMQDTS LGAESHPLHLHG
Sbjct: 425 SPKFPWSPIVPFNYTGTPPNNTMVSNGTNLMVLPYNTSVELVMQDTSILGAESHPLHLHG 484

Query: 486 FNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPG 536
           FNFFV+GQGFGN+DP+KD +NFNL+DP+ERNTVGVPSGGW AIRF ADNPG
Sbjct: 485 FNFFVVGQGFGNFDPNKDPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPG 535
Lignin degradation and detoxification of lignin-derived products.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: 2
>sp|Q5N9X2|LAC4_ORYSJ Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1 Back     alignment and function description
>sp|O81081|LAC2_ARATH Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1 Back     alignment and function description
>sp|Q0DHL2|LAC12_ORYSJ Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1 Back     alignment and function description
>sp|Q10ND7|LAC10_ORYSJ Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1 Back     alignment and function description
>sp|Q0DHL5|LAC11_ORYSJ Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2 Back     alignment and function description
>sp|Q5N9W4|LAC5_ORYSJ Putative laccase-5 OS=Oryza sativa subsp. japonica GN=LAC5 PE=3 SV=1 Back     alignment and function description
>sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 Back     alignment and function description
>sp|O80434|LAC4_ARATH Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2 Back     alignment and function description
>sp|Q8VZA1|LAC11_ARATH Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query537
147858029611 hypothetical protein VITISV_003134 [Viti 0.996 0.875 0.791 0.0
225435092585 PREDICTED: laccase-17 [Vitis vinifera] 0.994 0.912 0.794 0.0
356527433579 PREDICTED: laccase-17-like [Glycine max] 0.996 0.924 0.793 0.0
224060169580 predicted protein [Populus trichocarpa] 0.985 0.912 0.787 0.0
297746143566 unnamed protein product [Vitis vinifera] 0.947 0.899 0.826 0.0
296086210 1094 unnamed protein product [Vitis vinifera] 0.994 0.488 0.781 0.0
225449450584 PREDICTED: laccase-17 [Vitis vinifera] 0.994 0.914 0.781 0.0
356567915567 PREDICTED: laccase-17-like [Glycine max] 0.955 0.904 0.813 0.0
359479021585 PREDICTED: laccase-17-like [Vitis vinife 0.994 0.912 0.779 0.0
255582055576 laccase, putative [Ricinus communis] gi| 0.973 0.907 0.790 0.0
>gi|147858029|emb|CAN80346.1| hypothetical protein VITISV_003134 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  881 bits (2276), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/546 (79%), Positives = 472/546 (86%), Gaps = 11/546 (2%)

Query: 1   MGASLLPSS-----LAILCVWFLFPAGLAVAS---ITRHYKFDIKMQNVTRLCHTKSIIT 52
           MG S LPS          C+       LA+A    ITRHYKFDIK+QNVTRLCHTKSI+T
Sbjct: 1   MGVSFLPSPPFVGVFVFSCMALCLLPELALAQDSGITRHYKFDIKLQNVTRLCHTKSILT 60

Query: 53  VNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQ 112
           VNGQFPGPRIVAREGDRL+IKVVNHV NNISIHWHGIRQL SGWADGPAY+TQCPIQTGQ
Sbjct: 61  VNGQFPGPRIVAREGDRLLIKVVNHVQNNISIHWHGIRQLRSGWADGPAYVTQCPIQTGQ 120

Query: 113 SYVYNFTISGQRGTLFWHAHISWLRATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFN 172
           SYVYNFT+ GQRGTLFWHAHISWLR+T+YGPL+I PKR VPYPF KP+KEVPIIFGEW+N
Sbjct: 121 SYVYNFTVVGQRGTLFWHAHISWLRSTLYGPLIILPKRNVPYPFEKPHKEVPIIFGEWWN 180

Query: 173 ADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAAL 232
           ADTEA+I+Q+LQTG GPNVSDAYTINGLPGPLYNCSAKDTFKL+VK  KTYLLRLINAAL
Sbjct: 181 ADTEAVISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLRVKASKTYLLRLINAAL 240

Query: 233 NDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARP 292
           NDELFFSIANH++TVVD DAIY+K F+TD LLI PGQTTN+LLK KP +PNA FL++ARP
Sbjct: 241 NDELFFSIANHTLTVVDADAIYVKPFETDTLLIAPGQTTNVLLKTKPHFPNAAFLITARP 300

Query: 293 YATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLR 352
           Y TG GTFDNSTVAGILEYE P+  P  STVSIKKLPL KPTLP LNDT+FA N+T RLR
Sbjct: 301 YVTGLGTFDNSTVAGILEYELPSASPH-STVSIKKLPLFKPTLPPLNDTSFATNFTNRLR 359

Query: 353 SLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTA 412
           SLA+ QFPANVPQ V++ FFFT+GLGT+PC +NQTCQGP N TKFAASVNN SF   +TA
Sbjct: 360 SLASPQFPANVPQKVDRHFFFTIGLGTSPCDQNQTCQGP-NGTKFAASVNNVSFASSTTA 418

Query: 413 LLQAHFFGQ-NGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDT 471
           LLQAHF GQ NGVY  DFP TP+I FNYTGTPPNNT V NGTKVVVLPFN SVELVMQDT
Sbjct: 419 LLQAHFSGQSNGVYNPDFPITPIIPFNYTGTPPNNTLVSNGTKVVVLPFNTSVELVMQDT 478

Query: 472 STLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFR 531
           S LGAESHPLHLHGFNFFV+GQGFGNYDP+KD  NFNL+DP+ERNTVGVPSGGWVAIRF 
Sbjct: 479 SILGAESHPLHLHGFNFFVVGQGFGNYDPNKDPANFNLVDPIERNTVGVPSGGWVAIRFL 538

Query: 532 ADNPGD 537
           ADNP +
Sbjct: 539 ADNPAN 544

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225435092|ref|XP_002284473.1| PREDICTED: laccase-17 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356527433|ref|XP_003532315.1| PREDICTED: laccase-17-like [Glycine max] Back     alignment and taxonomy information
>gi|224060169|ref|XP_002300066.1| predicted protein [Populus trichocarpa] gi|222847324|gb|EEE84871.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297746143|emb|CBI16199.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|296086210|emb|CBI31651.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225449450|ref|XP_002278215.1| PREDICTED: laccase-17 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356567915|ref|XP_003552160.1| PREDICTED: laccase-17-like [Glycine max] Back     alignment and taxonomy information
>gi|359479021|ref|XP_003632204.1| PREDICTED: laccase-17-like [Vitis vinifera] gi|297746168|emb|CBI16224.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255582055|ref|XP_002531824.1| laccase, putative [Ricinus communis] gi|223528520|gb|EEF30544.1| laccase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query537
TAIR|locus:2168128577 LAC17 "laccase 17" [Arabidopsi 0.977 0.909 0.741 2e-223
TAIR|locus:2066117573 LAC2 "laccase 2" [Arabidopsis 0.968 0.907 0.694 1.6e-212
TAIR|locus:2154518566 LAC16 "laccase 16" [Arabidopsi 0.947 0.899 0.546 5.5e-157
TAIR|locus:2150139558 LAC10 "laccase 10" [Arabidopsi 0.959 0.922 0.539 3e-156
TAIR|locus:2194110581 LAC1 "laccase 1" [Arabidopsis 0.942 0.870 0.501 4.2e-143
TAIR|locus:2153469565 LAC12 "laccase 12" [Arabidopsi 0.947 0.900 0.501 2.3e-142
TAIR|locus:2063109580 LAC5 "laccase 5" [Arabidopsis 0.964 0.893 0.489 8.9e-141
TAIR|locus:2060879570 LAC3 "laccase 3" [Arabidopsis 0.959 0.903 0.510 1.5e-140
TAIR|locus:2083604567 LAC7 "laccase 7" [Arabidopsis 0.949 0.899 0.493 2.3e-135
TAIR|locus:2182895569 LAC13 "laccase 13" [Arabidopsi 0.945 0.892 0.480 3.8e-133
TAIR|locus:2168128 LAC17 "laccase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2157 (764.4 bits), Expect = 2.0e-223, P = 2.0e-223
 Identities = 394/531 (74%), Positives = 456/531 (85%)

Query:    10 LAILCVWFLFPAGLAVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDR 69
             LA+     L P       ITRHY  +IKMQNVTRLCHTKS+++VNGQFPGP+++AREGD+
Sbjct:     7 LAVFSCVLLLPQ--PAFGITRHYTLEIKMQNVTRLCHTKSLVSVNGQFPGPKLIAREGDQ 64

Query:    70 LIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFW 129
             ++IKVVN VPNNIS+HWHGIRQL SGWADGPAYITQCPIQTGQSYVYN+TI GQRGTL++
Sbjct:    65 VLIKVVNQVPNNISLHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNYTIVGQRGTLWY 124

Query:   130 HAHISWLRATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQTGAGP 189
             HAHISWLR+TVYGPL+I PKRGVPYPF KP+KEVP+IFGEWFNADTEAII Q+ QTG GP
Sbjct:   125 HAHISWLRSTVYGPLIILPKRGVPYPFAKPHKEVPMIFGEWFNADTEAIIRQATQTGGGP 184

Query:   190 NVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVD 249
             NVSDAYTINGLPGPLYNCSAKDTF+L+VKPGKTYLLRLINAALNDELFFSIANH+VTVV+
Sbjct:   185 NVSDAYTINGLPGPLYNCSAKDTFRLRVKPGKTYLLRLINAALNDELFFSIANHTVTVVE 244

Query:   250 VDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGIL 309
              DAIY+K F+T+ +LI PGQTTN+LLK K SYP+A+F M+ARPY TGQGTFDNSTVAGIL
Sbjct:   245 ADAIYVKPFETETILIAPGQTTNVLLKTKSSYPSASFFMTARPYVTGQGTFDNSTVAGIL 304

Query:   310 EYEAPAKFPRS-STVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVN 368
             EYE P +   + S  SIK L L KP LPALNDT FA  ++ +LRSL +  FPANVP  V+
Sbjct:   305 EYEPPKQTKGAHSRTSIKNLQLFKPILPALNDTNFATKFSNKLRSLNSKNFPANVPLNVD 364

Query:   369 KRFFFTVGLGTNPC--PKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQN-GVY 425
             ++FFFTVGLGTNPC    NQTCQGP N+T FAAS++N SF +P+ ALLQ+H+ GQ+ GVY
Sbjct:   365 RKFFFTVGLGTNPCNHKNNQTCQGPTNTTMFAASISNISFTMPTKALLQSHYSGQSHGVY 424

Query:   426 TTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHG 485
             +  FP +P++ FNYTGTPPNNT V NGT ++VLP+N SVELVMQDTS LGAESHPLHLHG
Sbjct:   425 SPKFPWSPIVPFNYTGTPPNNTMVSNGTNLMVLPYNTSVELVMQDTSILGAESHPLHLHG 484

Query:   486 FNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPG 536
             FNFFV+GQGFGN+DP+KD +NFNL+DP+ERNTVGVPSGGW AIRF ADNPG
Sbjct:   485 FNFFVVGQGFGNFDPNKDPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPG 535
GO:0005507 "copper ion binding" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA;IMP
GO:0046274 "lignin catabolic process" evidence=IEA
GO:0048046 "apoplast" evidence=IEA
GO:0052716 "hydroquinone:oxygen oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009698 "phenylpropanoid metabolic process" evidence=IMP
GO:0009809 "lignin biosynthetic process" evidence=IMP
GO:0009832 "plant-type cell wall biogenesis" evidence=RCA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2066117 LAC2 "laccase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154518 LAC16 "laccase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150139 LAC10 "laccase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194110 LAC1 "laccase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153469 LAC12 "laccase 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063109 LAC5 "laccase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060879 LAC3 "laccase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083604 LAC7 "laccase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182895 LAC13 "laccase 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5N9X2LAC4_ORYSJ1, ., 1, 0, ., 3, ., 20.73180.94410.8756yesno
Q10ND7LAC10_ORYSJ1, ., 1, 0, ., 3, ., 20.71370.93660.8702nono
Q9FJD5LAC17_ARATH1, ., 1, 0, ., 3, ., 20.74190.97760.9098yesno
Q0DHL2LAC12_ORYSJ1, ., 1, 0, ., 3, ., 20.70010.97020.9076nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.10.30.976
3rd Layer1.10.3.20.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00024402001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (585 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query537
TIGR03389539 TIGR03389, laccase, laccase, plant 0.0
TIGR03388541 TIGR03388, ascorbase, L-ascorbate oxidase, plant t 4e-86
PLN02604566 PLN02604, PLN02604, oxidoreductase 1e-76
PLN02191574 PLN02191, PLN02191, L-ascorbate oxidase 5e-62
pfam07732119 pfam07732, Cu-oxidase_3, Multicopper oxidase 2e-55
PLN02168545 PLN02168, PLN02168, copper ion binding / pectinest 9e-53
TIGR03390538 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu 9e-44
PLN02991543 PLN02991, PLN02991, oxidoreductase 2e-42
PLN00044596 PLN00044, PLN00044, multi-copper oxidase-related p 4e-41
PLN02354552 PLN02354, PLN02354, copper ion binding / oxidoredu 2e-39
PLN02835539 PLN02835, PLN02835, oxidoreductase 2e-39
pfam00394146 pfam00394, Cu-oxidase, Multicopper oxidase 2e-39
COG2132451 COG2132, SufI, Putative multicopper oxidases [Seco 9e-38
PLN02792536 PLN02792, PLN02792, oxidoreductase 7e-34
pfam07731135 pfam07731, Cu-oxidase_2, Multicopper oxidase 3e-29
TIGR01480587 TIGR01480, copper_res_A, copper-resistance protein 6e-23
PRK10965523 PRK10965, PRK10965, multicopper oxidase; Provision 1e-05
TIGR02376311 TIGR02376, Cu_nitrite_red, nitrite reductase, copp 0.004
>gnl|CDD|234194 TIGR03389, laccase, laccase, plant Back     alignment and domain information 
 Score =  840 bits (2172), Expect = 0.0
 Identities = 343/510 (67%), Positives = 411/510 (80%), Gaps = 15/510 (2%)

Query: 28  ITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWH 87
             RHY FD++ +NVTRLC TKSI+TVNG+FPGP + AREGD +I+ V N+V  N++IHWH
Sbjct: 2   EVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWH 61

Query: 88  GIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATVYGPLVIF 147
           G+RQL +GWADGPAYITQCPIQ GQSYVYNFTI+GQRGTL+WHAHISWLRATVYG +VI 
Sbjct: 62  GVRQLRNGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLWWHAHISWLRATVYGAIVIL 121

Query: 148 PKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNC 207
           PK GVPYPFPKP +EVPII GEW+NAD EA+INQ+ QTG  PNVSDAYTING PGPLYNC
Sbjct: 122 PKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYNC 181

Query: 208 SAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITP 267
           S+KDTFKL V+PGKTYLLR+INAALNDELFF+IANH++TVV+VDA Y K F+T  ++I P
Sbjct: 182 SSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIGP 241

Query: 268 GQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKK 327
           GQTTN+LL A  S P   + M+ARPY    G FDN+T   IL+Y+  +   +        
Sbjct: 242 GQTTNVLLTADQS-PG-RYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPI------ 293

Query: 328 LPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQT 387
                PTLPA NDTA A N++ +LRSL +AQ+PANVP T+++R FFT+GLG +PCP N T
Sbjct: 294 ----LPTLPAYNDTAAATNFSNKLRSLNSAQYPANVPVTIDRRLFFTIGLGLDPCPNN-T 348

Query: 388 CQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTP-PNN 446
           CQGP N T+FAAS+NN SF++P+TALLQAH+FG +GV+TTDFP+ P  KFNYTGT  PNN
Sbjct: 349 CQGP-NGTRFAASMNNISFVMPTTALLQAHYFGISGVFTTDFPANPPTKFNYTGTNLPNN 407

Query: 447 TSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKN 506
               NGTKVV L FN++VELV+QDTS LG+E+HP+HLHG+NFFV+G GFGN+DP KD   
Sbjct: 408 LFTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAK 467

Query: 507 FNLIDPVERNTVGVPSGGWVAIRFRADNPG 536
           FNL+DP ERNTVGVP+GGW AIRF ADNPG
Sbjct: 468 FNLVDPPERNTVGVPTGGWAAIRFVADNPG 497

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539
>gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type Back     alignment and domain information
>gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase Back     alignment and domain information
>gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase Back     alignment and domain information
>gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase Back     alignment and domain information
>gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type Back     alignment and domain information
>gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase Back     alignment and domain information
>gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase Back     alignment and domain information
>gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase Back     alignment and domain information
>gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase Back     alignment and domain information
>gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family Back     alignment and domain information
>gnl|CDD|236810 PRK10965, PRK10965, multicopper oxidase; Provisional Back     alignment and domain information
>gnl|CDD|131429 TIGR02376, Cu_nitrite_red, nitrite reductase, copper-containing Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 537
PLN00044596 multi-copper oxidase-related protein; Provisional 100.0
TIGR03389539 laccase laccase, plant. Members of this protein fa 100.0
PLN02991543 oxidoreductase 100.0
PLN02354552 copper ion binding / oxidoreductase 100.0
PLN02792536 oxidoreductase 100.0
PLN02168545 copper ion binding / pectinesterase 100.0
PLN02835539 oxidoreductase 100.0
KOG1263563 consensus Multicopper oxidases [Secondary metaboli 100.0
PLN02191574 L-ascorbate oxidase 100.0
PLN02604566 oxidoreductase 100.0
TIGR03388541 ascorbase L-ascorbate oxidase, plant type. Members 100.0
TIGR03390538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 100.0
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 100.0
PRK10965523 multicopper oxidase; Provisional 100.0
PRK10883471 FtsI repressor; Provisional 100.0
COG2132451 SufI Putative multicopper oxidases [Secondary meta 100.0
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 100.0
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 100.0
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 99.96
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 99.76
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 99.73
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 99.72
PRK10965523 multicopper oxidase; Provisional 99.52
PLN02835539 oxidoreductase 99.51
PRK10883471 FtsI repressor; Provisional 99.46
TIGR03389539 laccase laccase, plant. Members of this protein fa 99.46
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 99.44
COG2132451 SufI Putative multicopper oxidases [Secondary meta 99.33
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 99.3
PLN02991543 oxidoreductase 99.28
PLN02168545 copper ion binding / pectinesterase 99.27
PLN02354552 copper ion binding / oxidoreductase 99.23
PLN02792536 oxidoreductase 99.21
TIGR03388541 ascorbase L-ascorbate oxidase, plant type. Members 99.2
TIGR03390538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 99.19
PLN02604566 oxidoreductase 99.19
PLN02191574 L-ascorbate oxidase 99.05
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 98.95
PLN00044596 multi-copper oxidase-related protein; Provisional 98.92
PRK02710119 plastocyanin; Provisional 98.66
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 98.64
KOG1263563 consensus Multicopper oxidases [Secondary metaboli 98.61
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 98.25
TIGR0265783 amicyanin amicyanin. Members of this family are am 98.11
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 98.11
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 98.03
PRK02888635 nitrous-oxide reductase; Validated 97.99
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 97.95
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 97.64
TIGR03094195 sulfo_cyanin sulfocyanin. Members of this family a 97.64
COG3794128 PetE Plastocyanin [Energy production and conversio 97.32
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 97.22
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 97.15
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 97.05
TIGR03102115 halo_cynanin halocyanin domain. Halocyanins are bl 96.98
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 96.5
PRK10378375 inactive ferrous ion transporter periplasmic prote 94.63
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 94.26
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 94.24
COG4454158 Uncharacterized copper-binding protein [Inorganic 94.14
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 93.96
TIGR02695125 azurin azurin. Azurin is a blue copper-binding pro 93.9
COG4454158 Uncharacterized copper-binding protein [Inorganic 93.86
PRK02888635 nitrous-oxide reductase; Validated 92.95
TIGR02866201 CoxB cytochrome c oxidase, subunit II. Cytochrome 92.18
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 91.27
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 87.72
TIGR02695125 azurin azurin. Azurin is a blue copper-binding pro 87.04
PRK02710119 plastocyanin; Provisional 85.35
COG1622247 CyoA Heme/copper-type cytochrome/quinol oxidases, 84.94
PF1269082 BsuPI: Intracellular proteinase inhibitor; InterPr 84.16
COG4263637 NosZ Nitrous oxide reductase [Energy production an 83.65
TIGR0265783 amicyanin amicyanin. Members of this family are am 83.0
COG3794128 PetE Plastocyanin [Energy production and conversio 82.45
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.8e-100  Score=810.83  Aligned_cols=485  Identities=28%  Similarity=0.468  Sum_probs=385.2

Q ss_pred             hcccccccCccEEEEEEEEEEEEeecC--eeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCC
Q 009358           19 FPAGLAVASITRHYKFDIKMQNVTRLC--HTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGW   96 (537)
Q Consensus        19 ~~~~~~~~~~~~~~~l~~~~~~~~~~g--~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~   96 (537)
                      +.+-+.|.+.+++|+|+|++..+++||  ..+.+++|||++|||+|++++||+|+|+|+|.++++++|||||++|..++|
T Consensus        17 ~~~~~~~~~~~~~y~~~v~~~~~~pdg~~~~~~vi~vNGq~PGPtI~~~~GD~v~V~V~N~L~~~ttIHWHGl~q~~t~w   96 (596)
T PLN00044         17 APAPAGAGDPYAYYDWEVSYVSAAPLGGVKKQEAIGINGQFPGPALNVTTNWNLVVNVRNALDEPLLLTWHGVQQRKSAW   96 (596)
T ss_pred             CCCccccCCceEEEEEEEEEEEEccCCCceeeEEEEEcCcCCCCcEEEECCCEEEEEEEeCCCCCccEEECCccCCCCcc
Confidence            334445667899999999999999999  456899999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccccCCCCeEEEEEEeCCCccceEEecchhhhh-ccceeeEEEcCCCCCCCCCCCCC-CceeEEeeeeeccC
Q 009358           97 ADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGVPYPFPKPY-KEVPIIFGEWFNAD  174 (537)
Q Consensus        97 ~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~-~Gl~G~liV~~~~~~~~~~~~~d-~e~~l~l~d~~~~~  174 (537)
                      +||+++ |||||+||++|+|+|++++++||||||+|.+.|+ +||+|+|||++++..++|+...+ +|.+|+|+||++.+
T Consensus        97 ~DGv~~-TQcPI~PG~sftY~F~~~dq~GT~WYHsH~~~Q~~~Gl~GalII~~~~~~~~P~~~~~~~e~~i~l~DW~~~~  175 (596)
T PLN00044         97 QDGVGG-TNCAIPAGWNWTYQFQVKDQVGSFFYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDITLFIADWYARD  175 (596)
T ss_pred             ccCCCC-CcCCcCCCCcEEEEEEeCCCCceeEeeccchhhhhCcCeeEEEEcCcccccccccCCcccceEEEecccccCC
Confidence            999988 9999999999999999877999999999999999 89999999999876666665434 79999999999988


Q ss_pred             hHHHHHHhhcCCCCCCCCCcEEEcCccCCCcccC----CCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEe
Q 009358          175 TEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCS----AKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDV  250 (537)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~----~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~  250 (537)
                      ..++ ......|..+..++.++|||+....++|+    +...+.++|++||+|||||||++....+.|+|+||+|+|||+
T Consensus       176 ~~~~-~~~l~~g~~~~~~d~~lING~g~~~~n~~~~~~~~~~~~i~V~~Gk~yRlRiINaa~~~~~~fsIdgH~mtVIa~  254 (596)
T PLN00044        176 HRAL-RRALDAGDLLGAPDGVLINAFGPYQYNDSLVPPGITYERINVDPGKTYRFRVHNVGVATSLNFRIQGHNLLLVEA  254 (596)
T ss_pred             HHHH-HHHHhcCCCCCCCCceEEcccCccccCCccccCCCccceEEECCCCEEEEEEEEccCCceEEEEECCCEEEEEEe
Confidence            7664 33444454445679999999965445664    224458999999999999999999999999999999999999


Q ss_pred             cCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeec-cCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCC
Q 009358          251 DAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPY-ATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLP  329 (537)
Q Consensus       251 DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~-~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~  329 (537)
                      ||.+++|+.+|.|.|++||||||+|++++++ +++|||++... ..+. .++...+.|||+|.++..       .. ..+
T Consensus       255 DG~~v~P~~vd~i~I~~GQRydVLV~a~q~~-~~~Y~i~a~~~~~~~~-~~~~~~~~AIl~Y~~~~~-------~~-~~~  324 (596)
T PLN00044        255 EGSYTSQQNYTNLDIHVGQSYSFLLTMDQNA-STDYYVVASARFVDAA-VVDKLTGVAILHYSNSQG-------PA-SGP  324 (596)
T ss_pred             CCcccCceeeeeEEEcCCceEEEEEECCCCC-CCceEEEEecccccCc-cccCcceeEEEEECCCCC-------CC-CCC
Confidence            9999999999999999999999999999975 24899998642 2332 245567899999987652       00 111


Q ss_pred             CCCCCCCC-CCCcccccccccccccccCCCCCCCCCCCcceEEEEEeccCc-CCCCCCCCccCCCCCceeEeeecCeeec
Q 009358          330 LMKPTLPA-LNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGT-NPCPKNQTCQGPNNSTKFAASVNNFSFI  407 (537)
Q Consensus       330 ~~~p~~p~-~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~iN~~~~~  407 (537)
                       + |..|. .+++....++...++.+..++.+.+.|...+....+.++... ..+.....|     .+++.|+|||++|.
T Consensus       325 -~-P~~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~s~Nnvsf~  397 (596)
T PLN00044        325 -L-PDAPDDQYDTAFSINQARSIRWNVTASGARPNPQGSFHYGDITVTDVYLLQSMAPELI-----DGKLRATLNEISYI  397 (596)
T ss_pred             -C-CCCCcccCCchhhhhhhHhhhhccCCCcCCCCCcccceeeEEeeeeeeeecccccccc-----CCeEEEEECcccCC
Confidence             2 44443 455543333334444333333333334444443334332111 011001112     23678999999999


Q ss_pred             CCChhhHHhhhcCCCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCC
Q 009358          408 LPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFN  487 (537)
Q Consensus       408 ~p~~pll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~  487 (537)
                      .|+.|+|.+++.+.+|.|..+|++.||..           ....++.++.++.|++|||||+|..   ...||||||||+
T Consensus       398 ~p~~p~L~a~~~~~~gv~~~~fp~~pp~~-----------~~~~~t~v~~~~~n~~VeiV~qn~~---~~~HP~HLHGh~  463 (596)
T PLN00044        398 APSTPLMLAQIFNVPGVFKLDFPNHPMNR-----------LPKLDTSIINGTYKGFMEIIFQNNA---TNVQSYHLDGYA  463 (596)
T ss_pred             CCCCcchhhhhccCCCcccCCCCCCCCcc-----------ccccCceEEEcCCCCEEEEEEeCCC---CCCCCeeEcCcc
Confidence            99999998888888899998998887741           0124678899999999999999953   468999999999


Q ss_pred             eeEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEecCCCC
Q 009358          488 FFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGD  537 (537)
Q Consensus       488 F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG~  537 (537)
                      ||||++|.|+|++. +...+|+.||++|||+.||++||++|||+|||||+
T Consensus       464 F~Vvg~G~G~~~~~-~~~~~Nl~nPp~RdTv~vp~~gW~aIRF~aDNPG~  512 (596)
T PLN00044        464 FFVVGMDYGLWTDN-SRGTYNKWDGVARSTIQVFPGAWTAILVFLDNAGI  512 (596)
T ss_pred             EEEEeecCCCCCCC-cccccccCCCCccceEEeCCCCeEEEEEecCCCEE
Confidence            99999999999965 45679999999999999999999999999999996

>TIGR03389 laccase laccase, plant Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>TIGR03389 laccase laccase, plant Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>TIGR03094 sulfo_cyanin sulfocyanin Back     alignment and domain information
>COG3794 PetE Plastocyanin [Energy production and conversion] Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>TIGR03102 halo_cynanin halocyanin domain Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>TIGR02695 azurin azurin Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>TIGR02866 CoxB cytochrome c oxidase, subunit II Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>TIGR02695 azurin azurin Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] Back     alignment and domain information
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo Back     alignment and domain information
>COG4263 NosZ Nitrous oxide reductase [Energy production and conversion] Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>COG3794 PetE Plastocyanin [Energy production and conversion] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query537
1aoz_A552 Refined Crystal Structure Of Ascorbate Oxidase At 1 6e-53
4a2f_A497 Coriolopsis Gallica Laccase Collected At 12.65 Kev 1e-40
4a2d_A496 Coriolopsis Gallica Laccase T2 Copper Depleted At P 1e-40
2hrg_A496 Crystal Structure Of Blue Laccase From Trametes Tro 2e-40
3kw7_A502 Crystal Structure Of Lacb From Trametes Sp. Ah28-2 7e-38
1gyc_A499 Crystal Structure Determination At Room Temperature 8e-38
2xyb_A497 Crystal Structure Of A Fully Functional Laccase Fro 6e-37
2qt6_A498 Crystal Structure Determination Of A Blue Laccase F 2e-36
3fpx_A499 Native Fungus Laccase From Trametes Hirsuta Length 2e-35
2hzh_A499 Crystal Structure Of Laccase From Coriolus Zonatus 2e-35
3pxl_A499 Type-2 Cu-Depleted Fungus Laccase From Trametes Hir 3e-35
1kya_A499 Active Laccase From Trametes Versicolor Complexed W 3e-34
3t6v_A495 Crystal Structure Of Laccase From Steccherinum Ochr 4e-34
3sqr_A580 Crystal Structure Of Laccase From Botrytis Aclada A 2e-33
3sqr_A580 Crystal Structure Of Laccase From Botrytis Aclada A 1e-09
3v9e_A580 Structure Of The L513m Mutant Of The Laccase From B 2e-33
3v9e_A580 Structure Of The L513m Mutant Of The Laccase From B 1e-09
3div_A499 Crystal Structure Of Laccase From Cerrena Maxima At 4e-33
1hfu_A503 Type-2 Cu-Depleted Laccase From Coprinus Cinereus A 7e-32
1a65_A504 Type-2 Cu-depleted Laccase From Coprinus Cinereus L 8e-32
2h5u_A499 Crystal Structure Of Laccase From Cerrena Maxima At 2e-31
1v10_A521 Structure Of Rigidoporus Lignosus Laccase From Hemi 4e-31
1zpu_A534 Crystal Structure Of Fet3p, A Multicopper Oxidase T 5e-27
1gw0_A559 Crystal Structure Of Laccase From Melanocarpus Albo 7e-27
3dkh_A559 L559a Mutant Of Melanocarpus Albomyces Laccase Leng 8e-27
2q9o_A559 Near-Atomic Resolution Structure Of A Melanocarpus 1e-26
3pps_A604 Crystal Structure Of An Ascomycete Fungal Laccase F 2e-19
3pps_A604 Crystal Structure Of An Ascomycete Fungal Laccase F 5e-08
3g5w_A318 Crystal Structure Of Blue Copper Oxidase From Nitro 3e-16
2xu9_A439 Crystal Structure Of Laccase From Thermus Thermophi 4e-11
3gdc_A288 Crystal Structure Of Multicopper Oxidase Length = 2 1e-10
3zx1_A481 Multicopper Oxidase From Campylobacter Jejuni: A Me 2e-08
3aw5_A448 Structure Of A Multicopper Oxidase From The Hyperth 2e-05
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 Back     alignment and structure 
Iteration: 1

 Score =  205 bits (521), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 159/543 (29%), Positives = 252/543 (46%), Gaps = 75/543 (13%)
Query: 27  SITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHV-PNNISIH 85
           S  RHYK++++       C+   ++ +NGQFPGP I A  GD +++++ N +    + IH
Sbjct: 1   SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIH 60
Query: 86  WHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPL 144
           WHGI Q  + WADG A I+QC I  G+++ YNFT+    GT F+H H+   R A +YG L
Sbjct: 61  WHGILQRGTPWADGTASISQCAINPGETFFYNFTVD-NPGTFFYHGHLGMQRSAGLYGSL 119
Query: 145 VIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQTGAGP--------------- 189
           ++ P +G   PF     E+ ++  +W++   ++I  Q +   + P               
Sbjct: 120 IVDPPQGKKEPFHYD-GEINLLLSDWWH---QSIHKQEVGLSSKPIRWIGEPQTILLNGR 175
Query: 190 -----NVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHS 244
                +++  Y  N  P  L    +   +   V P KTY +R+ +      L F+I NH 
Sbjct: 176 GQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQ 235
Query: 245 VTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNST 304
           + VV+ D  Y++ F T  + I  G++ ++L+    + P+  + +S    A    T    T
Sbjct: 236 LLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQN-PSENYWVSVGTRARHPNTPPGLT 294
Query: 305 VAGILEYEAPAKFPRSSTVSIKKLPLM-KPTLPALNDTAFAFNYTTRLRSLANAQFPANV 363
           +   L              S+ KLP    P  PA +D   + N+T R+ +   +  P   
Sbjct: 295 LLNYLPN------------SVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKP--- 339
Query: 364 PQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQA------H 417
           P   N+R F              T    N   K+A  +N+ S  LP T  L A      H
Sbjct: 340 PVKFNRRIFLL-----------NTQNVINGYVKWA--INDVSLALPPTPYLGAMKYNLLH 386
Query: 418 FFGQNGVYTTDFPSTPLIKFNYT-GTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLG- 475
            F QN       P   +   +Y   TPP N     G  V        V++++Q+ + +  
Sbjct: 387 AFDQN-------PPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKE 439
Query: 476 --AESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRAD 533
             +E+HP HLHG +F+V+G G G +  +++  + NL +P  RNTV +   GW AIRF AD
Sbjct: 440 NLSETHPWHLHGHDFWVLGYGDGKFS-AEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD 498
Query: 534 NPG 536
           NPG
Sbjct: 499 NPG 501
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 Back     alignment and structure
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 Back     alignment and structure
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 Back     alignment and structure
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 Back     alignment and structure
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 Back     alignment and structure
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 Back     alignment and structure
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 Back     alignment and structure
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 Back     alignment and structure
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 Back     alignment and structure
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 Back     alignment and structure
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 Back     alignment and structure
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 Back     alignment and structure
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 Back     alignment and structure
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 Back     alignment and structure
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 Back     alignment and structure
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 Back     alignment and structure
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 Back     alignment and structure
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 Back     alignment and structure
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 Back     alignment and structure
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 Back     alignment and structure
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 Back     alignment and structure
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 Back     alignment and structure
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 Back     alignment and structure
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas Europaea Length = 318 Back     alignment and structure
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus Hb27 Length = 439 Back     alignment and structure
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase Length = 288 Back     alignment and structure
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A Metallo-Oxidase Length = 481 Back     alignment and structure
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The Hyperthermophilic Archaeon Pyrobaculum Aerophilum Length = 448 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query537
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 0.0
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 0.0
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 0.0
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 0.0
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 1e-179
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 1e-176
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 1e-176
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 1e-176
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 1e-114
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 1e-108
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 1e-60
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 2e-49
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 5e-07
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 1e-40
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 3e-40
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 2e-06
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 6e-39
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 8e-07
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 6e-36
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 8e-05
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 1e-33
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 5e-32
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 3e-26
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 5e-29
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 1e-26
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 1e-19
2zoo_A442 Probable nitrite reductase; electron transfer, ele 6e-29
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 3e-27
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 1e-04
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 2e-26
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 9e-26
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 1e-25
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 3e-25
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 1e-09
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 7e-25
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 2e-23
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 4e-19
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 1e-17
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 2e-15
1sdd_B647 Coagulation factor V; copper-binding protein, cofa 3e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
2r7e_B770 Coagulation factor VIII; ceruloplasmin fold, cuppe 5e-07
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 Back     alignment and structure
 Score =  602 bits (1555), Expect = 0.0
 Identities = 145/530 (27%), Positives = 235/530 (44%), Gaps = 53/530 (10%)

Query: 29  TRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHWH 87
            RHYK++++       C+   ++ +NGQFPGP I A  GD +++++ N +    + IHWH
Sbjct: 3   IRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWH 62

Query: 88  GIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVI 146
           GI Q  + WADG A I+QC I  G+++ YNFT+    GT F+H H+   R A +YG L++
Sbjct: 63  GILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIV 121

Query: 147 FPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQTGAG-PNVSDAYTINGL----- 200
            P +G   PF     E+ ++  +W++                         +NG      
Sbjct: 122 DPPQGKKEPFH-YDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDC 180

Query: 201 -----------PGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVD 249
                      P  L    +   +   V P KTY +R+ +      L F+I NH + VV+
Sbjct: 181 SIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE 240

Query: 250 VDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGIL 309
            D  Y++ F T  + I  G++ ++L+    + P+  + +S    A      +      +L
Sbjct: 241 ADGNYVQPFYTSDIDIYSGESYSVLITTDQN-PSENYWVSVGTRARH---PNTPPGLTLL 296

Query: 310 EYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNK 369
            Y        +S   +   P   P  PA +D   + N+T R+ +   +  P   P   N+
Sbjct: 297 NYL------PNSVSKLPTSPP--PQTPAWDDFDRSKNFTYRITAAMGSPKP---PVKFNR 345

Query: 370 RFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDF 429
           R F                Q   N      ++N+ S  LP T  L A  +     +  + 
Sbjct: 346 RIFLL------------NTQNVIN-GYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNP 392

Query: 430 PSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLG---AESHPLHLHGF 486
           P     +     TPP N     G  V        V++++Q+ + +    +E+HP HLHG 
Sbjct: 393 PPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGH 452

Query: 487 NFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPG 536
           +F+V+G G G +   ++  + NL +P  RNTV +   GW AIRF ADNPG
Sbjct: 453 DFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPG 501
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Length = 770 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query537
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 100.0
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 100.0
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 100.0
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 100.0
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 100.0
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 100.0
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 100.0
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 100.0
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 100.0
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 100.0
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 100.0
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 100.0
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 100.0
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 100.0
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 100.0
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 100.0
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 100.0
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 100.0
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 100.0
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 100.0
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 100.0
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 100.0
2zoo_A442 Probable nitrite reductase; electron transfer, ele 100.0
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 100.0
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 100.0
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 100.0
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 100.0
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 100.0
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 100.0
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 100.0
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 100.0
1sdd_B647 Coagulation factor V; copper-binding protein, cofa 100.0
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 100.0
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 100.0
2r7e_B770 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 100.0
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 99.84
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 99.8
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 99.8
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 99.79
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 99.77
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 99.76
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 99.7
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 99.7
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 99.69
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 99.66
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 99.66
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 99.64
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 99.63
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 99.62
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 99.61
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 99.59
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 99.59
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 99.58
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 99.58
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 99.57
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 99.56
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 99.56
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 99.52
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 99.51
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 99.51
1sdd_B 647 Coagulation factor V; copper-binding protein, cofa 99.48
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 99.45
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 99.43
2zoo_A 442 Probable nitrite reductase; electron transfer, ele 99.42
2cal_A154 Rusticyanin; iron respiratory electron transport c 99.42
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 99.41
2r7e_B 770 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.39
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 99.29
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 99.27
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 99.26
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 99.26
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 99.2
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 98.97
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 98.87
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 98.76
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 98.71
3c75_A132 Amicyanin; copper proteins, electron transfer comp 98.71
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 98.61
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 98.59
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 98.56
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 98.54
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 98.5
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 98.46
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 98.46
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 98.43
1byp_A99 Protein (plastocyanin); electron transfer, photosy 98.4
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 98.33
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 98.25
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 98.23
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 98.21
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 98.19
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 98.16
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 98.16
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 98.07
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 98.02
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 98.01
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 98.0
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 97.98
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 97.72
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 97.39
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 97.26
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 97.15
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 96.81
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 96.72
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 96.6
2cal_A154 Rusticyanin; iron respiratory electron transport c 96.57
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 96.54
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 96.35
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 96.24
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 95.93
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 95.66
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 95.65
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 95.56
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 95.51
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 95.5
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 95.47
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 95.37
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 95.06
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 94.9
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 94.86
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 94.66
1byp_A99 Protein (plastocyanin); electron transfer, photosy 94.41
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 93.83
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 93.42
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 93.24
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 92.42
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 91.55
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 91.04
3c75_A132 Amicyanin; copper proteins, electron transfer comp 90.49
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 89.02
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 87.64
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 86.97
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 85.83
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 85.68
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 83.6
3isy_A120 Bsupi, intracellular proteinase inhibitor; intrace 81.44
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-91  Score=759.00  Aligned_cols=476  Identities=30%  Similarity=0.539  Sum_probs=377.1

Q ss_pred             CccEEEEEEEEEEEEeecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCC-CCceeEecCccccCCCCCCCCCcccc
Q 009358           27 SITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPAYITQ  105 (537)
Q Consensus        27 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~vtq  105 (537)
                      +++|+|+|+|++..+++||..+.+|+|||++|||+||+++||+|+|+|+|.|+ ++++|||||+++..++|+||+|++||
T Consensus         1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq   80 (552)
T 1aoz_A            1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ   80 (552)
T ss_dssp             CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred             CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence            46899999999999999999999999999999999999999999999999997 99999999999999999999999999


Q ss_pred             cccCCCCeEEEEEEeCCCccceEEecchhhhh-ccceeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccChHHHHHHhhc
Q 009358          106 CPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQ  184 (537)
Q Consensus       106 ~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~  184 (537)
                      |+|+||++|+|+|++ +++||||||||.+.|+ +||+|+|||++++....++ ..|+|++|+|+||++.+..+++.....
T Consensus        81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~  158 (552)
T 1aoz_A           81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS  158 (552)
T ss_dssp             CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred             CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence            999999999999998 8999999999999988 8999999999986554454 346899999999999988776543322


Q ss_pred             CC-CCCCCCCcEEEcCccCCCcccCC-------------C-----CcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeE
Q 009358          185 TG-AGPNVSDAYTINGLPGPLYNCSA-------------K-----DTFKLKVKPGKTYLLRLINAALNDELFFSIANHSV  245 (537)
Q Consensus       185 ~g-~~~~~~~~~liNG~~~~~~~~~~-------------~-----~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~  245 (537)
                      .. .....+++++|||+..  ++|+.             .     ..+.++|++|++|||||||+|....+.|+|+||+|
T Consensus       159 ~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~  236 (552)
T 1aoz_A          159 KPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL  236 (552)
T ss_dssp             SSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred             ccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence            11 1112468999999974  33431             1     12379999999999999999999999999999999


Q ss_pred             EEEEecCCCcCceEecEEEECCcceEEEEEEe-CCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCCCCCCCcccc
Q 009358          246 TVVDVDAIYIKSFQTDILLITPGQTTNILLKA-KPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVS  324 (537)
Q Consensus       246 ~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~-~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~  324 (537)
                      +|||+||.+++|+.++++.|+|||||||+|++ ++++  |+|||+++... +.  .......|||+|.++..       .
T Consensus       237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~--g~y~i~~~~~~-~~--~~~~~~~ail~y~~~~~-------~  304 (552)
T 1aoz_A          237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPS--ENYWVSVGTRA-RH--PNTPPGLTLLNYLPNSV-------S  304 (552)
T ss_dssp             EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTT--CCEEEEEEEES-SC--CCSCCEEEEEEETTSCT-------T
T ss_pred             EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCC--CCEEEEEEccc-CC--CCCccEEEEEEECCCCC-------C
Confidence            99999999999999999999999999999999 4544  89999999764 21  23457899999987652       0


Q ss_pred             cCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCe
Q 009358          325 IKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNF  404 (537)
Q Consensus       325 ~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~  404 (537)
                      ..+.... |..|.+++......  ..++.+.... +..+|..+++++.+.++++..             ...+.|+|||+
T Consensus       305 ~~p~~~~-p~~p~~~~~~~~~~--~~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~-------------~~~~~w~iNg~  367 (552)
T 1aoz_A          305 KLPTSPP-PQTPAWDDFDRSKN--FTYRITAAMG-SPKPPVKFNRRIFLLNTQNVI-------------NGYVKWAINDV  367 (552)
T ss_dssp             SCCSSCC-CCCCCTTCHHHHHH--HHTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE-------------TTEEEEEETTE
T ss_pred             CCCCCCC-CCCCcccccccccc--ccccccccCC-CCCCCCCCcEEEEEEEeeccC-------------CCeEEEEECCC
Confidence            0001111 33444444322211  1233333222 333456678888887654321             23567999999


Q ss_pred             eecCCChhhHHhhhcCCCCccccCCCCCCcc-cccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCC---CCCCC
Q 009358          405 SFILPSTALLQAHFFGQNGVYTTDFPSTPLI-KFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLG---AESHP  480 (537)
Q Consensus       405 ~~~~p~~pll~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~---~~~HP  480 (537)
                      +|..|+.|+|.+.+.+++|.|..+++..++. .|+.+. .+.+...+.+++++.++.|++|||+|+|.+...   ...||
T Consensus       368 s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP  446 (552)
T 1aoz_A          368 SLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDT-PPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHP  446 (552)
T ss_dssp             EECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTS-CCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEE
T ss_pred             ccCCCCCCHHHHHhhcCccccccCCCcccccccccccc-ccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCC
Confidence            9999989999888887788887776554331 233331 111223456788899999999999999965322   46799


Q ss_pred             ccccCCCeeEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEecCCCC
Q 009358          481 LHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGD  537 (537)
Q Consensus       481 ~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG~  537 (537)
                      ||||||+||||++|.|.|++ .+...+|+.+|+|||||.||++||++|||+|||||+
T Consensus       447 ~HLHGh~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~  502 (552)
T 1aoz_A          447 WHLHGHDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGV  502 (552)
T ss_dssp             EEETTCCEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEE
T ss_pred             EEEcCCceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeE
Confidence            99999999999999999987 445678999999999999999999999999999995
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 537
d1gyca1130 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la 4e-34
d1aoza1129 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc 5e-34
d1aoza3214 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C 1e-33
d1v10a1136 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T 3e-33
d1hfua1131 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin 1e-32
d1aoza2209 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C 8e-32
d1v10a2168 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus 3e-31
d1hfua2172 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr 3e-27
d2q9oa2181 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce 9e-27
d2q9oa1162 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces 6e-26
d1gyca2170 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, 9e-25
d1oe2a1159 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige 5e-22
d1kv7a1140 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch 2e-21
d2j5wa1192 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie 3e-21
d2j5wa3207 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sap 2e-19
d1kbva1151 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser 6e-19
d1gska1181 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Baci 5e-18
d1sdda1180 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t 1e-17
d2bw4a1157 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcalige 3e-17
d1mzya1153 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodoba 1e-16
d1gska2174 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba 1e-15
d2q9oa3216 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce 1e-15
d2j5wa4179 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sap 1e-15
d1e30a_153 b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan 2e-15
d1gyca3199 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, 2e-15
d1kv7a2165 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc 1e-14
d1gska3154 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba 2e-13
d1hfua3200 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr 5e-13
d1v10a3190 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus 1e-11
d1sddb2139 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B 9e-11
d2j5wa5149 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa 2e-09
d1sdda2116 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos 2e-08
d2j5wa2145 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap 1e-07
d1kv7a3181 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Esc 1e-07
d1kcwa2146 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap 4e-07
d1sddb167 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (B 2e-04
d1fwxa1132 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-ter 2e-04
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 Back     information, alignment and structure

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Trametes versicolor, laccase 2 [TaxId: 5325]

 Score =  123 bits (310), Expect = 4e-34
 Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 6/130 (4%)

Query: 27  SITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNN----- 81
           +I       +    V+     +  I VNG FP P I  ++GDR  + VV+ + N+     
Sbjct: 1   AIGPAASLVVANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKS 60

Query: 82  ISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT-V 140
            SIHWHG  Q  + WADGPA++ QCPI +G S++Y+F +  Q GT ++H+H+S      +
Sbjct: 61  TSIHWHGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGL 120

Query: 141 YGPLVIFPKR 150
            GP V++  +
Sbjct: 121 RGPFVVYDPK 130
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 Back     information, alignment and structure
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 207 Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 181 Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 157 Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Length = 153 Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 179 Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154 Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 116 Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 181 Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 67 Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Length = 132 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query537
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 100.0
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 100.0
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 100.0
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 100.0
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 100.0
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 99.97
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.97
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.97
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.97
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.97
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.97
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.97
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 99.96
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.95
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.95
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.95
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.92
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.89
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.89
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 99.88
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.87
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.87
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.87
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 99.82
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.82
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 99.81
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.8
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.69
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.68
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.68
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.68
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.66
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.65
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.6
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 99.58
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 99.56
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.56
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 99.51
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.35
d1sddb167 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.32
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.29
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.26
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 99.25
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.21
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 99.17
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.13
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.1
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.04
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.03
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.03
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 98.9
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 98.79
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 98.69
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 98.67
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 98.51
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 98.44
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 98.44
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 98.43
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 98.36
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 98.32
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 98.27
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 98.26
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 98.26
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 98.23
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 98.22
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 98.2
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 98.2
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 98.19
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 98.18
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 98.17
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 98.14
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 98.14
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 98.12
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 98.11
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 98.1
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 98.09
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 98.08
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 98.07
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 98.04
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 98.03
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 98.03
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 98.0
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 97.97
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 97.93
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 97.88
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 97.88
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 97.83
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 97.83
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 97.82
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 97.81
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 97.73
d1paza_120 Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta 97.69
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 97.64
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 97.63
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 97.6
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 97.55
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 97.46
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 97.4
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 97.28
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 97.2
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 96.98
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 96.91
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 96.76
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 96.15
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 96.12
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 95.9
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 95.39
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 95.29
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 95.27
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 94.92
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 94.55
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 93.25
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 92.14
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 91.65
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 88.92
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 88.9
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 88.49
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 86.84
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 86.74
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 84.25
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 80.81
d1cyxa_158 Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 80.71
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 80.26
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Rigidoporus lignosus [TaxId: 219653]

Probab=100.00  E-value=1e-39  Score=281.76  Aligned_cols=124  Identities=32%  Similarity=0.586  Sum_probs=117.0

Q ss_pred             ccEEEEEEEEEEEEeecCe-eeEEEEEcCcCCCceEEEecCCEEEEEEEecCC-----CCceeEecCccccCCCCCCCCC
Q 009358           28 ITRHYKFDIKMQNVTRLCH-TKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-----NNISIHWHGIRQLLSGWADGPA  101 (537)
Q Consensus        28 ~~~~~~l~~~~~~~~~~g~-~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~-----~~~siH~HG~~~~~~~~~DGv~  101 (537)
                      ++++|+|++++..+++||. .+.+++|||++|||+|++++||+|+|+|+|.++     +++||||||+++..++++||++
T Consensus         1 a~v~~~l~~~~~~~~pdG~~~~~~~~~nG~~PGP~i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~   80 (136)
T d1v10a1           1 ATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPA   80 (136)
T ss_dssp             CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCB
T ss_pred             CEEEEEEEEEEEEECCCCcceeEEEEECCCccCCeEEEECCcEEEEEEEeCCCCcccCcceeEEecccccccccccCCCC
Confidence            3689999999999999996 788999999999999999999999999999875     7899999999999999999999


Q ss_pred             cccccccCCCCeEEEEEEeCCCccceEEecchhhhh-ccceeeEEEcCCCC
Q 009358          102 YITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRG  151 (537)
Q Consensus       102 ~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~-~Gl~G~liV~~~~~  151 (537)
                      +++||+|.||++|+|+|++++++||||||||.+.|+ +||+|+|||+++++
T Consensus        81 ~~t~~~I~PG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~GL~G~liV~~~~d  131 (136)
T d1v10a1          81 FVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPND  131 (136)
T ss_dssp             TTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred             ccccceECCCCeEEEEEECCCCccceEEecCchhHHhCCCEEEEEECCCcc
Confidence            999999999999999999877899999999999988 89999999998764
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure