Citrus Sinensis ID: 009387
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 536 | ||||||
| 359474017 | 585 | PREDICTED: O-glucosyltransferase rumi ho | 0.904 | 0.829 | 0.683 | 0.0 | |
| 297742541 | 497 | unnamed protein product [Vitis vinifera] | 0.904 | 0.975 | 0.683 | 0.0 | |
| 255539447 | 528 | KDEL motif-containing protein 1 precurso | 0.960 | 0.975 | 0.608 | 0.0 | |
| 255537419 | 534 | KDEL motif-containing protein 1 precurso | 0.830 | 0.833 | 0.682 | 0.0 | |
| 147800396 | 439 | hypothetical protein VITISV_020976 [Viti | 0.776 | 0.947 | 0.709 | 0.0 | |
| 332071136 | 546 | glycosyltransferase [Panax notoginseng] | 0.912 | 0.895 | 0.625 | 0.0 | |
| 356497228 | 522 | PREDICTED: KDEL motif-containing protein | 0.912 | 0.936 | 0.599 | 0.0 | |
| 224074911 | 380 | predicted protein [Populus trichocarpa] | 0.707 | 0.997 | 0.767 | 0.0 | |
| 225470185 | 525 | PREDICTED: O-glucosyltransferase rumi ho | 0.962 | 0.982 | 0.605 | 1e-179 | |
| 255539445 | 506 | KDEL motif-containing protein 1 precurso | 0.833 | 0.883 | 0.640 | 1e-178 |
| >gi|359474017|ref|XP_002269577.2| PREDICTED: O-glucosyltransferase rumi homolog [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/496 (68%), Positives = 403/496 (81%), Gaps = 11/496 (2%)
Query: 42 TTTTLLLFLPLLIATAFISSLWNSDTSNFSVHNISRNKTVIIVSRKPQNRPPKRITTPLN 101
T T LF L +A AFIS S F V+N R I + + RP I PLN
Sbjct: 99 TIYTFFLFFILFVAAAFISFFCFSSRFIFLVNNSERKAVPISENHRKTPRP---IVVPLN 155
Query: 102 C-VKNQTQTCPTNYPKTSQTQESISDYSIPPTSTCPDYFRWIHEDLSPWKVTGITRDMLE 160
C +N TQTCP NYP T T D + P CPDYFRWIHEDL PWK TGI+RDM+E
Sbjct: 156 CSARNLTQTCPGNYPTTFDT-----DLAWKPV--CPDYFRWIHEDLKPWKTTGISRDMVE 208
Query: 161 RANQTAHFRLILVNNKVYIHKYKQSIQTRDVFTIWGILQLLRKYPGRLPDLELMFDCDDR 220
RA ++AHFRL++V KVYI KYK+SIQTRDVFTIWGILQLLR+YPG+L DLEL FDC+DR
Sbjct: 209 RAKRSAHFRLVIVKGKVYIEKYKKSIQTRDVFTIWGILQLLRRYPGKLLDLELTFDCNDR 268
Query: 221 PVIRSRDYSGPNNKGPPPLFRYSGDRWTMDIVFPDWSFWGWAEINIKPWESLLRELKEGN 280
PVIRS D+ GPN+ PPPLFRY GDRWT+D+VFPDWSFWGW EIN+KPW +LL++LKEGN
Sbjct: 269 PVIRSGDHRGPNSTSPPPLFRYCGDRWTLDVVFPDWSFWGWPEINMKPWGNLLKDLKEGN 328
Query: 281 NGRNWIDREPYAYWKGNPFVAETRRDLLTCNLSDKHDWNARLYVQDWILESKRGFQQSNL 340
N W++REPYAYWKGNP VAETRRDLLTCN+SD DWNARL+VQDW+LES++G++QS++
Sbjct: 329 NRTKWMEREPYAYWKGNPLVAETRRDLLTCNVSDVQDWNARLFVQDWMLESQQGYKQSDV 388
Query: 341 ASQCAHRYKIYIEGYAWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDK 400
++QC HRYKIYIEG+AWSVSEKYILACDS+TL+VKP ++DFF+R LQP+ HYWPI+D DK
Sbjct: 389 SNQCTHRYKIYIEGWAWSVSEKYILACDSVTLMVKPRYYDFFMRSLQPVHHYWPIKDNDK 448
Query: 401 CKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKMEYVYDYMFHLLNEYAKLLKFKPVAP 460
C+SIKFAVDWGN+HKQKAQ IG+AAS+FIQEELKM+YVYDYMFHLLNEYAKLL+FKP P
Sbjct: 449 CRSIKFAVDWGNSHKQKAQAIGKAASDFIQEELKMDYVYDYMFHLLNEYAKLLRFKPTIP 508
Query: 461 DGAVEVCSETMACNANGSHKKFMMESLVKGPSITNPCTLPPPYEPKVLGAFYRRKLNAIL 520
+GAVEVCSET+AC+A G KKFMMESLV PS+T+PC LPPPY+P VLGA R+K N+I
Sbjct: 509 EGAVEVCSETVACSAEGVEKKFMMESLVNSPSVTSPCALPPPYDPPVLGALLRKKANSIK 568
Query: 521 QVQKWEDRYWESLKKQ 536
QV++WE+RYWE+L +Q
Sbjct: 569 QVERWENRYWENLNQQ 584
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297742541|emb|CBI34690.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255539447|ref|XP_002510788.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] gi|223549903|gb|EEF51390.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255537419|ref|XP_002509776.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] gi|223549675|gb|EEF51163.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|147800396|emb|CAN66409.1| hypothetical protein VITISV_020976 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|332071136|gb|AED99886.1| glycosyltransferase [Panax notoginseng] | Back alignment and taxonomy information |
|---|
| >gi|356497228|ref|XP_003517464.1| PREDICTED: KDEL motif-containing protein 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224074911|ref|XP_002304487.1| predicted protein [Populus trichocarpa] gi|222841919|gb|EEE79466.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|225470185|ref|XP_002268245.1| PREDICTED: O-glucosyltransferase rumi homolog [Vitis vinifera] gi|302143884|emb|CBI22745.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255539445|ref|XP_002510787.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] gi|223549902|gb|EEF51389.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 536 | ||||||
| TAIR|locus:2172818 | 542 | AT5G23850 "AT5G23850" [Arabido | 0.882 | 0.872 | 0.608 | 1.7e-169 | |
| TAIR|locus:2101358 | 539 | AT3G48980 "AT3G48980" [Arabido | 0.833 | 0.829 | 0.610 | 1.2e-163 | |
| TAIR|locus:2031274 | 578 | AT1G63420 "AT1G63420" [Arabido | 0.832 | 0.771 | 0.603 | 1.9e-161 | |
| TAIR|locus:2050674 | 523 | DTA2 "AT2G45830" [Arabidopsis | 0.805 | 0.826 | 0.606 | 7.4e-153 | |
| TAIR|locus:2098936 | 498 | AT3G61270 "AT3G61270" [Arabido | 0.802 | 0.863 | 0.588 | 6.4e-147 | |
| TAIR|locus:2098946 | 536 | AT3G61280 "AT3G61280" [Arabido | 0.850 | 0.850 | 0.528 | 1.8e-135 | |
| TAIR|locus:2050664 | 523 | AT2G45840 "AT2G45840" [Arabido | 0.833 | 0.854 | 0.540 | 5.4e-134 | |
| TAIR|locus:2098956 | 455 | AT3G61290 "AT3G61290" [Arabido | 0.804 | 0.947 | 0.530 | 4.6e-128 | |
| TAIR|locus:2007362 | 507 | AT1G07220 "AT1G07220" [Arabido | 0.712 | 0.753 | 0.477 | 1.7e-105 | |
| FB|FBgn0086253 | 411 | rumi "rumi" [Drosophila melano | 0.613 | 0.800 | 0.244 | 3.8e-21 |
| TAIR|locus:2172818 AT5G23850 "AT5G23850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1648 (585.2 bits), Expect = 1.7e-169, P = 1.7e-169
Identities = 298/490 (60%), Positives = 377/490 (76%)
Query: 54 IATAFISSLWNSDTS-----NFSVHNISRNKTVIIVSRKPQNRPPKRIT-TP-----LNC 102
I AFIS+ DT+ + ++ +T I + P RP IT +P L+C
Sbjct: 49 IVGAFISTRLLLDTTVLLEKKAATTTTTKTQTQTITPKYP--RPTTVITQSPKPEFTLHC 106
Query: 103 VKNQTQ-TCPTN-YPKTSQTQESISDYSIPPTSTCPDYFRWIHEDLSPWKVTGITRDMLE 160
N+T +CP+N YP T+ ++ D + PPT+TCPDYFRWIHEDL PW TGITR+ LE
Sbjct: 107 SANETTASCPSNKYPTTTSFEDD--DTNHPPTATCPDYFRWIHEDLRPWSRTGITREALE 164
Query: 161 RANQTAHFRLILVNNKVYIHKYKQSIQTRDVFTIWGILQLLRKYPGRLPDLELMFDCDDR 220
RA +TA FRL +V K+Y+ K++ + QTRDVFTIWG LQLLRKYPG++PDLELMFDC D
Sbjct: 165 RAKKTATFRLAIVGGKIYVEKFQDAFQTRDVFTIWGFLQLLRKYPGKIPDLELMFDCVDW 224
Query: 221 PVIRSRDYSGPNNKGPPPLFRYSGDRWTMDIVFPDWSFWGWAEINIKPWESLLRELKEGN 280
PV+R+ +++G N PPPLFRY G+ T+DIVFPDWSFWGWAE+NIKPWESLL+EL+EGN
Sbjct: 225 PVVRATEFAGANAPSPPPLFRYCGNEETLDIVFPDWSFWGWAEVNIKPWESLLKELREGN 284
Query: 281 NGRNWIDREPYAYWKGNPFVAETRRDLLTCNLSDKHDWNARLYVQDWILESKRGFQQSNL 340
WI+REPYAYWKGNP VAETR+DL+ CN+S++H+WNARLY QDWI ESK G++QS+L
Sbjct: 285 ERTKWINREPYAYWKGNPMVAETRQDLMKCNVSEEHEWNARLYAQDWIKESKEGYKQSDL 344
Query: 341 ASQCAHRYKIYIEGYAWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDK 400
ASQC HRYKIYIEG AWSVSEKYILACDS+TLLVKP+++DFF R L P HYWP+R+ DK
Sbjct: 345 ASQCHHRYKIYIEGSAWSVSEKYILACDSVTLLVKPHYYDFFTRGLLPAHHYWPVREHDK 404
Query: 401 CKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKMEYVYDYMFHLLNEYAKLLKFKPVAP 460
C+SIKFAVDWGN+H QKAQ+IG+AAS+FIQ++LKM+YVYDYM+HLL EY+KLL+FKP P
Sbjct: 405 CRSIKFAVDWGNSHIQKAQDIGKAASDFIQQDLKMDYVYDYMYHLLTEYSKLLQFKPEIP 464
Query: 461 DGAVEVCSETMACNANGSHKKFMMESLVKGPSITNPCTLPPPYEPKVLGAFYRRKLNAIL 520
AVE+CSETMAC +G+ +KFM ESLVK P+ + PC +PPPY+P +RK + +
Sbjct: 465 RNAVEICSETMACLRSGNERKFMTESLVKQPADSGPCAMPPPYDPATYYEVVKRKQSTNM 524
Query: 521 QVQKWEDRYW 530
++ +WE +YW
Sbjct: 525 RILQWEMKYW 534
|
|
| TAIR|locus:2101358 AT3G48980 "AT3G48980" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2031274 AT1G63420 "AT1G63420" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2050674 DTA2 "AT2G45830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2098936 AT3G61270 "AT3G61270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2098946 AT3G61280 "AT3G61280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2050664 AT2G45840 "AT2G45840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2098956 AT3G61290 "AT3G61290" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2007362 AT1G07220 "AT1G07220" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0086253 rumi "rumi" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| fgenesh4_pg.C_LG_III001027 | hypothetical protein (380 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 536 | |||
| smart00672 | 256 | smart00672, CAP10, Putative lipopolysaccharide-mod | 1e-128 | |
| pfam05686 | 281 | pfam05686, Glyco_transf_90, Glycosyl transferase f | 1e-104 | |
| pfam05686 | 281 | pfam05686, Glyco_transf_90, Glycosyl transferase f | 9e-50 |
| >gnl|CDD|214773 smart00672, CAP10, Putative lipopolysaccharide-modifying enzyme | Back alignment and domain information |
|---|
Score = 373 bits (959), Expect = e-128
Identities = 145/256 (56%), Positives = 175/256 (68%), Gaps = 6/256 (2%)
Query: 207 RLPDLELMFDCDDRPVIRSRDYSGPNNKGPPPLFRYSGDRWTMDIVFPDWSFW-GWAEIN 265
R+PDLELMF+C D P+I + ++ N PPPLF Y G +DIVFPDWSFW GW E+N
Sbjct: 1 RVPDLELMFNCRDWPLINKKSFASYNQHAPPPLFSYCGSDEYLDIVFPDWSFWAGWPEVN 60
Query: 266 IKPWESLLRELKEGNNGRNWIDREPYAYWKGNPFVAETRRDLLTCNLSDKHDWNARLYVQ 325
+PW+ L EL+EGN W D+ YAYW+GNP VA R DL+ CN S NAR+ +Q
Sbjct: 61 GRPWDKDLMELEEGNKRTKWSDKNAYAYWRGNPTVASERLDLIKCNQSSPELVNARITIQ 120
Query: 326 DW-----ILESKRGFQQSNLASQCAHRYKIYIEGYAWSVSEKYILACDSMTLLVKPYFHD 380
DW E GF++S L QC H+YKI IEG AWSV KYILACDS+ L VKP +++
Sbjct: 121 DWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGVAWSVRLKYILACDSVVLKVKPEYYE 180
Query: 381 FFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEELKMEYVYD 440
FF R LQP HYWPI+ C+ +K AVDWGN H +KAQEIG+ S FIQ+ L ME VYD
Sbjct: 181 FFSRGLQPWVHYWPIKSDLSCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLSMEDVYD 240
Query: 441 YMFHLLNEYAKLLKFK 456
YMFHLL EYAKLLK+K
Sbjct: 241 YMFHLLQEYAKLLKYK 256
|
Length = 256 |
| >gnl|CDD|218692 pfam05686, Glyco_transf_90, Glycosyl transferase family 90 | Back alignment and domain information |
|---|
| >gnl|CDD|218692 pfam05686, Glyco_transf_90, Glycosyl transferase family 90 | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 536 | |||
| KOG2458 | 528 | consensus Endoplasmic reticulum protein EP58, cont | 100.0 | |
| PF05686 | 395 | Glyco_transf_90: Glycosyl transferase family 90; I | 100.0 | |
| smart00672 | 256 | CAP10 Putative lipopolysaccharide-modifying enzyme | 100.0 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 97.67 |
| >KOG2458 consensus Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-127 Score=994.52 Aligned_cols=480 Identities=55% Similarity=1.024 Sum_probs=431.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccccc----ccccC--CCcccccccCCCCCCCCCCccccccCCC----CCCCCCCCCC
Q 009387 45 TLLLFLPLLIATAFISSLWNSDTSNFS----VHNIS--RNKTVIIVSRKPQNRPPKRITTPLNCVK----NQTQTCPTNY 114 (536)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~c~~----~~~~~cp~~~ 114 (536)
+++.++++++.||+++ ++|.+.... .+... ...+.+|...-. +.-+....+.+.|+- +.+.+||...
T Consensus 38 v~~~~~~~~l~~af~s--~~d~s~~~~~~~~~~~~~~~~t~~~~P~~~~~-~~~s~~~~~~l~cs~~s~~~~~~~~p~~~ 114 (528)
T KOG2458|consen 38 VVLSARYFYLQGVFSS--KLDFSPAGEKKFKVKVSRTPTTRIPVPKPLDR-KDGSFLRRYRLYCSLFSGLKREVLCPSSH 114 (528)
T ss_pred HHHHHHHHHHHhcccc--eecchhhcccceEEEeccCCcccccCCccccc-ccCCcchhhhhhhhhhhcccccccccccc
Confidence 4445555788898777 888887421 11100 111123321111 122234456788832 4567899874
Q ss_pred CCCCCCccCCCCCCCCCCCCCCcchhhHHhcccccccCCCCHHHHHHHhccCcEEEEEECCEEEEEcccccccchhHHHH
Q 009387 115 PKTSQTQESISDYSIPPTSTCPDYFRWIHEDLSPWKVTGITRDMLERANQTAHFRLILVNNKVYIHKYKQSIQTRDVFTI 194 (536)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~Cpd~F~~I~~DL~Pw~~~GItr~~le~a~~~~~~rv~I~nGrlyv~~~~~~~~tR~~ftl 194 (536)
...-. +...++...+..+|||||+|||+||.||+++|||++++++|++.+++|++|++|++||+.|++++|+|++||+
T Consensus 115 ~~~s~--~~~~~~~~~~~~tCPDyfrWIheDL~Pw~etgItre~~erak~~a~fr~vI~~g~~yv~~Y~ks~qtrd~ft~ 192 (528)
T KOG2458|consen 115 VSKSP--YILKNPVYHESCTCPDYFRWIHEDLCPWRETGITREMAERAKRKAHFRLVIKEGRLYVENYRKSIQTRDVFTI 192 (528)
T ss_pred cccCc--cccCCCCCCCCCCCCcHHHHHHHhcCccccccchHHHhhhhhcccceeeeeecCceehhhhhhhhcccchHHH
Confidence 33311 1233466678889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCeEEEeeCCCcccccccCCCCCCCCCCCCeeeecCCCCCCccccCCccccccccccccchHHHHH
Q 009387 195 WGILQLLRKYPGRLPDLELMFDCDDRPVIRSRDYSGPNNKGPPPLFRYSGDRWTMDIVFPDWSFWGWAEINIKPWESLLR 274 (536)
Q Consensus 195 ~~il~llr~~~~~LPDvEf~fn~~D~P~v~~~~~~G~~~~~~~PlFs~ck~~~~~DIL~Pd~~fwgwpe~~i~~w~~~~~ 274 (536)
|||+|||++|||.|||+||||||+|+|.|.+.+|+| + .+|+|||+||++.++.||+||||+||||+|.||++|+.+..
T Consensus 193 wgilqLlr~ypgklPDlElmf~~~D~P~v~~~~~~~-~-~~ppPlF~yCg~~~s~DIVfPdwsfwgw~e~nik~w~~~~~ 270 (528)
T KOG2458|consen 193 WGILQLLRTYPGKLPDLELMFNCGDWPLVRKKDFQG-T-PPPPPLFSYCGSSESLDIVFPDWSFWGWAEVNIKPWEKLLE 270 (528)
T ss_pred HHHHHHHHhcCCCCCCceeeeecCCccccchhhccC-C-CCCCCeEeecCCcccccccccCccccCChhhcccccchHHH
Confidence 999999999999999999999999999999999987 3 38999999999999999999999999999999999999999
Q ss_pred HHHccCCCCCCCCCCCeeEeeeCCCCc-cchHHHHhccccCCCCCcccchhhhhhhhhhcCCccCChhhhccccEEeeec
Q 009387 275 ELKEGNNGRNWIDREPYAYWKGNPFVA-ETRRDLLTCNLSDKHDWNARLYVQDWILESKRGFQQSNLASQCAHRYKIYIE 353 (536)
Q Consensus 275 ~l~e~~~~~pW~~K~pkafWRG~~t~~-~~R~~Lv~~~~s~~~~~~A~i~~~dW~~e~~~G~~~v~l~d~c~YKYli~iE 353 (536)
++.||+.+.+|.+|.++|||||++++. +.|..|+.||++.-.+|+++++.|+|.+|++.||+.+++++||+|||+||||
T Consensus 271 ~~~egn~~~~W~~r~~yAywrGnp~v~e~~rl~ll~cn~s~~~d~~~~~y~qdw~~E~~~G~k~s~l~dqc~hrYkIyiE 350 (528)
T KOG2458|consen 271 DIVEGNKRPKWKNKNPYAYWRGNPSVAERLRLDLLSCNNSELVDANATLYFQDWSKESKLGFKQSNLFDQCKHRYKIYIE 350 (528)
T ss_pred HHHhhccCCCcccCCceeEecCCCCccccchhhhhhcCCchhhchhhhhHHHhhhhhhhccccccchhhhcceeeEEEEe
Confidence 999999999999999999999999998 8999999999988889999999999999999999999999999999999999
Q ss_pred ccccccchHHHHhcCCeeeeecCchhhhhhhhccCCceEEecCCCCCcccHHHHHHhchhcHHHHHHHHHHHHHHHHHHh
Q 009387 354 GYAWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKFAVDWGNTHKQKAQEIGRAASNFIQEEL 433 (536)
Q Consensus 354 G~a~S~RlkyLL~c~SvVLk~~s~y~e~f~~~L~P~~HYVPv~~d~~~sDL~~~v~w~~~h~~~Aq~IA~~g~~fa~~~L 433 (536)
|.+||+|+||||+||||||++++.|+|||+++|+||+|||||+.+ |+||++||+|+++|+++||.||++|++|+++.|
T Consensus 351 G~awsvs~kYilacDS~tL~v~p~YydfF~r~l~P~~HYwPIk~~--c~slkfaV~Wgn~h~~~Aq~Igk~gs~f~r~~L 428 (528)
T KOG2458|consen 351 GTAWSVSEKYILACDSMTLKVKPEYYDFFYRGLQPWKHYWPIKSN--CRSLKFAVDWGNNHDEEAQKIGKEGSEFARKNL 428 (528)
T ss_pred eeeeeeecceeeecceeEEeecchHHHHHhhcccchhcccccccc--hhHHHHHHHhcccChHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999998 899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccCCcchhhhhhhhcccCCCCCCCCCCCCCCChHHHHHHHH
Q 009387 434 KMEYVYDYMFHLLNEYAKLLKFKPVAPDGAVEVCSETMACNANGSHKKFMMESLVKGPSITNPCTLPPPYEPKVLGAFYR 513 (536)
Q Consensus 434 ~~~~v~~Y~~~LL~eYArL~~~kP~~~~~a~e~c~e~~~c~~~g~~~~f~~~s~v~~p~~~~pc~~p~~~~~~~~~~~~~ 513 (536)
.|+++||||||||+|||+||+|||++|+||+|||+|+|+|+++|++|+||+||+|+ |+++.||.|||||++.+|++|++
T Consensus 429 ~m~~vYdYmfhllqeYakL~k~kpevp~~a~evc~~~m~cp~~g~~r~~m~~slv~-ps~~~pC~~p~p~~~~~l~~~~~ 507 (528)
T KOG2458|consen 429 KMDYVYDYMFHLLQEYAKLQKFKPEVPEGATEVCPETMACPEDGRERKFMDESLVM-PSDTAPCEMPPPYDPNELKEFLE 507 (528)
T ss_pred chhhHHHHHHHHHHHHHHHhhcCCcCCCCccccCchhccCCccchhhhhhhhcccc-ccccCcccCCCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998 99999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHhhh
Q 009387 514 RKLNAILQVQKWEDRYWESLK 534 (536)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~ 534 (536)
||+++++|||+||++||++|+
T Consensus 508 ~k~~~~~~ve~we~~y~~~~~ 528 (528)
T KOG2458|consen 508 KKESTTRQVEKWENKYWQKQN 528 (528)
T ss_pred HHHhHHHHHHHHHHHHHhccC
Confidence 999999999999999999874
|
|
| >PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS | Back alignment and domain information |
|---|
| >smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme | Back alignment and domain information |
|---|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 536 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-08 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 4e-08
Identities = 92/620 (14%), Positives = 179/620 (28%), Gaps = 191/620 (30%)
Query: 3 LLSNQLTMQRFCSSGLVRHFSEVLITLWRWRPRVKKNLGTTTTLLLFLPLLIATAFISS- 61
L + +Q+F L ++ + L++ + R P ++ +I
Sbjct: 72 LSKQEEMVQKFVEEVLRINY-KFLMSPIKTEQRQ--------------PSMMTRMYIEQR 116
Query: 62 --LWNSDTSNFSVHNISRNKTVIIVSRKPQN-RPPKRITT--PLNCVKNQTQTCPTNYPK 116
L+N D F+ +N+SR + + + + RP K + L K
Sbjct: 117 DRLYN-DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS------------GK 163
Query: 117 TSQTQESISDYSIPPTSTCPDYFRWIH--EDLSPWKVTGITRDMLERANQTAHFRL-ILV 173
T + Y + + W++ SP V + + +L + + R
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIF--WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS 221
Query: 174 NNKVYIHKYKQSIQTRDVFTIWGILQLLRKYPGRLPDLEL----------MFD--CDDRP 221
N K+ IH + ++ L + Y L L L F+ C +
Sbjct: 222 NIKLRIHSIQAELRR---------LLKSKPYENCL--LVLLNVQNAKAWNAFNLSC--KI 268
Query: 222 VIRSRDYS-----GPNNKGPPPLFRYSG---DRWTMDIVFPDWSFWGWAEINIKPWESLL 273
++ +R L +S + + ++ +P + L
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL-LLKY-------LDCRP-QDLP 319
Query: 274 RELKEGNNGRNWIDREPYAYWKGNPFV----AETRRDLLTCNLSDKHDWNARLYVQDW-- 327
RE+ NP AE+ RD W+ +V
Sbjct: 320 REVL-----------------TTNPRRLSIIAESIRD-------GLATWDNWKHVNCDKL 355
Query: 328 --ILESKRGFQQSNLASQCAHRYKIYIEG---------YAWSVSEKY----ILA-CDSMT 371
I+ES + + R ++ W K ++ +
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS 415
Query: 372 LLVKP------YFHDFFIRYLQP-----------LRHYWPIRDKDKCKSIKFAVDWGNTH 414
L+ K ++ + HY + D I +D
Sbjct: 416 LVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLD----- 470
Query: 415 KQKAQEIGRAASNFIQEELKMEYVYDY-MFHL--LNEYAKLLKFKPVAPD-GAVE--VCS 468
+Y Y + HL + ++ F+ V D +E +
Sbjct: 471 ---------------------QYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRH 509
Query: 469 ETMACNANGSHKKFMMESLVKGPSITNPCTLPPPYEPKV--LGAF--------YRRKLNA 518
++ A NA+GS + + P I + P YE V + F K
Sbjct: 510 DSTAWNASGSILNTLQQLKFYKPYICDND---PKYERLVNAILDFLPKIEENLICSKYTD 566
Query: 519 ILQV--QKWEDRYWESLKKQ 536
+L++ ++ +E KQ
Sbjct: 567 LLRIALMAEDEAIFEEAHKQ 586
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00