Citrus Sinensis ID: 009388

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530------
Protein Sequence
MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQTESPDTNKSSLDDTSSDLVQETAMSNYVTPNAVLPVESCGNSHITSDVEDHSTGGTVLEEYQVPGEILNQFDMPSNGQIDCKIFSPVQSQIHPDIAAYMDSPFASDFGNDHFGLNFKDGAGELDVSLTELFDEVFNYQDEFSCAESINQKELDVKSEVQLPGQVYMPQTISPRNFHAQDNGTCSDTDTDMSQVQQCDLVMGSSRLFSEHVESKDLLQAPSCFGSCQAEASLNDQEIGKGTICDYGDNSAVQVASSAVGSLYGNLNNYDLSPTLNNSVNYGGDFAVGTGIKIRTRQPQQRPNSFNSVNQGTAQRRLRLQVTLSPPMVGGDKQKDLGHSVEDDEVQSGVTKVEITGQI
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHHHHHHccccccccccccEEcccccccccccccccccccccEEEcccccccccccccccccccccccccccccccEEEccccccEEEEEEEEccccccccccccccccEEEEcccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccHHHccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccEEEEEEEcccccccccccccccccccccccccccEEEEEcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHHccccccEEEEEEEEEEcccccccccccEccccccEEEEEcccccccccccccccccccccEEEcccccEEEccccccccEEEEEEEEEEEcccccccccccEEEEEEEcccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccEEEEEccc
Coil and Loop (DISEMBL)
mavismeslplgfrfrptDEELINHYLRLKingrdsevevipeidvcklepwdlpglsviktedpewfffcprdrkypnglrsnrateagywkatgkdrtirsrkagtnaciGMKKTLVFyrgrapkgertnwimheyrptredlldsstkpsQAAFVLCRlfrkpeekvdvlkydeveqtespdtnksslddtssdLVQETAMsnyvtpnavlpvescgnshitsdvedhstggtvleeyqvpgeilnqfdmpsngqidckifspvqsqihpdiaaymdspfasdfgndhfglnfkdgageLDVSLTELFDEVFnyqdefscaesinqkeldvksevqlpgqvympqtisprnfhaqdngtcsdtdtdmsqvqqcdlvmgssrlfsehveskdllqapscfgscqaeaslndqeigkgticdygdnsavQVASSAVGslygnlnnydlsptlnnsvnyggdfavgtgikirtrqpqqrpnsfnsvnQGTAQRRLRLqvtlsppmvggdkqkdlghsveddevqsgvtkVEITGQI
Flexible Loop (DISEMBL)
mavismeslplgfrfrpTDEELINHYLRlkingrdseVEVIPeidvcklepwdLPGLSVIKTEDPEWFFFCPRdrkypnglrsnrateagywkatgkdrtirsrkagtnacigmkktlvfyrgrapkgertnwimheyRPTRedlldsstKPSQAAFVLCRlfrkpeekvdvlkydeveqtespdtnksslddTSSDLVQETAMSNYVTPNAVLPVESCGNSHITSDVEDHSTGGTVLEEYQVPGEILNQFDMPSNGQIDCKIFSPVQSQIHPDIAAYMDSPFASDFGNDHFGLNFKDGAGELDVSLTELFDEVFNYQDEFSCAESINQKELDVKSEVQLPGQVYMPQTISPRNFHAQDNGTCSDTDTDMSQVQQCDLVMGSSRLFSEHVESKDLLQAPSCFGSCQAEASLNDQEIGKGTICDYGDNSAVQVASSAVGSLYGNLNNYDLSPTLNNSVNYGGDFAVGTGIKIRtrqpqqrpnsfnsvnqgtaqrRLRLQVTLSPPmvggdkqkdlghsveddevqsgvtkveitgqi
Low Complexity Region (SEG)
MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQTESPDTNKSSLDDTSSDLVQETAMSNYVTPNAVLPVESCGNSHITSDVEDHSTGGTVLEEYQVPGEILNQFDMPSNGQIDCKIFSPVQSQIHPDIAAYMDSPFASDFGNDHFGLNFKDGAGELDVSLTELFDEVFNYQDEFSCAESINQKELDVKSEVQLPGQVYMPQTISPRNFHAQDNGTCSDTDTDMSQVQQCDLVMGSSRLFSEHVESKDLLQAPSCFGSCQAEASLNDQEIGKGTICDYGDNsavqvassavGSLYGNLNNYDLSPTLNNSVNYGGDFAVGTGIKIRTRQPQQRPNSFNSVNQGTAQRRLRLQVTLSPPMVGGDKQKDLGHSVEDDEVQSGVTKVEITGQI
Disordered region (IsUnstruct)
*********PLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYR***************AAFVLCRLFRKPEEKVDVL*********************************YVTPNAVLPVESCGN*HI*********GGTVLEEYQVPGEILNQFDMPSNGQIDCKIFSPVQSQIHPDIAAYMDSPFASDFGNDHFGLNFKDGAGELDVSLTELFDEVFNYQDEFSCAESINQ**************VY*******************************DLVM*****F********LLQAPSCFGSCQAEASLNDQEIGKGTICDYGDNSAVQVASSAVGSLYGNLNNYDLSPTLNNSVNYGGDFAVGTGIKI*****************************************************************
Disordered Region (DISOPRED)
******E***LGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPT**************AFVLCRLFR*******************************************************************************************************************************************DVSLTELFDEVF********************************************************QV****************VE**************************************************************************************************TAQRRLRLQ**************************************
Disordered Region (DISEMBL)
MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEV***************TSSDLVQETAMSNYVTPNAVLPVESCGNSHITSDVEDHSTGGTVLEEYQVPGEILNQFDMPSNGQIDCKIFSPVQSQIHPDIAAYMDSPFASDFGNDHFGLNFKDGAGELDVSLTELFDEVFNYQDEFSCAESINQKELDVKSEVQLPGQVYMPQTISPRNFHAQDNGTCSDTDTDMSQVQQCDLVMGSSRLFSEHVESKDLLQAPSCFGSCQAEASLNDQEIGKGTICDYGDNSAVQVASSAVGSLYGNLNNYDLSPTLNNSVNYGGDFAVGTGIKIRTRQPQQRPNSFNSVNQGTAQRRLRLQVTLSPPMVGGDKQKDLGHSVEDDEVQSGVTKVEITGQI
Disordered Region (DISPRO)
*******SLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPE******************************************************************GGT***E*QVPGEILNQFDMPSNGQIDCKIFSPVQSQIHPDIAAYMDSPFASDFGNDHFGLNFKDGAGELDVSLTELFDEVFNYQDEFSC***INQKELDVKSEVQLPGQVYMPQTISPRNFHAQDNGTCSDTDTDMSQVQQCDLVMGSSRLFSEHVESKDLL********************************************************************VGTGIKIRTRQP********SVNQGTAQRRLRLQVTLSP***************************E*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQTESPDTNKSSLDDTSSDLVQETAMSNYVTPNAVLPVESCGNSHITSDVEDHSTGGTVLEEYQVPGEILNQFDMPSNGQIDCKIFSPVQSQIHPDIAAYMDSPFASDFGNDHFGLNFKDGAGELDVSLTELFDEVFNYQDEFSCAESINQKELDVKSEVQLPGQVYMPQTISPRNFHAQDNGTCSDTDTDMSQVQQCDLVMGSSRLFSEHVESKDLLQAPSCFGSCQAEASLNDQEIGKGTICDYGDNSAVQVASSAVGSLYGNLNNYDLSPTLNNSVNYGGDFAVGTGIKIRTRQPQQRPNSFNSVNQGTAQRRLRLQVTLSPPMVGGDKQKDLGHSVEDDEVQSGVTKVEITGQI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	536	2.2.26 [Sep-21-2011]
Q9FLJ2	336	NAC domain-containing pro	no	no	0.281	0.449	0.560	2e-46
Q84K00	567	NAC domain-containing pro	no	no	0.296	0.280	0.527	7e-46
O04017	375	Protein CUP-SHAPED COTYLE	no	no	0.289	0.413	0.566	7e-45
Q9SV87	341	Protein BEARSKIN1 OS=Arab	no	no	0.296	0.466	0.536	1e-44
Q9FWX2	395	NAC domain-containing pro	no	no	0.285	0.387	0.493	5e-44
Q7GCL7	489	NAC domain-containing pro	no	no	0.281	0.308	0.541	1e-43
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.276	0.485	0.518	4e-42
Q9FRV4	310	Protein CUP-SHAPED COTYLE	no	no	0.279	0.483	0.532	8e-42
Q52QH4	318	NAC domain-containing pro	no	no	0.363	0.613	0.443	2e-41
O49255	268	NAC transcription factor	no	no	0.289	0.578	0.508	2e-41

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score =  187 bits (475), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 88/157 (56%), Positives = 112/157 (71%), Gaps = 6/157 (3%)

Query: 9   LPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEWF 68
           LP GFRF PTDEELI HYL  K+       + I E+D+ K EPW+LP ++  K  + EW+
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMA--KMGEKEWY 73

Query: 69  FFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKG 128
           FFC RDRKYP GLR+NRATEAGYWKATGKD+ I   K    + +GMKKTLVFYRGRAPKG
Sbjct: 74  FFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGK----SLVGMKKTLVFYRGRAPKG 129

Query: 129 ERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRK 165
           ++TNW+MHEYR   +    +  K ++  +V+CR+F+K
Sbjct: 130 QKTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQK 166

Arabidopsis thaliana (taxid: 3702)

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score =  185 bits (470), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 87/165 (52%), Positives = 115/165 (69%), Gaps = 6/165 (3%)

Query: 1   MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVI 60
           M   S+ SL  GFRF PTDEEL+ +YL+ K+  +  + + I   D+ K EPWDLP  S +
Sbjct: 1   MGRGSVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSKL 60

Query: 61  KTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVF 120
           K+ D EW+FF   D+KY NG ++NRATE GYWK TGKDR IR+     +  +GMKKTLV+
Sbjct: 61  KSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRN----GSRVVGMKKTLVY 116

Query: 121 YRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRK 165
           ++GRAP+GERTNW+MHEYR + EDL  +     Q A+VLCR+F+K
Sbjct: 117 HKGRAPRGERTNWVMHEYRLSDEDLKKAGV--PQEAYVLCRIFQK 159

Arabidopsis thaliana (taxid: 3702)

>sp|O04017|NAC98_ARATH Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1

 Score =  182 bits (461), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 90/159 (56%), Positives = 111/159 (69%), Gaps = 4/159 (2%)

Query: 7   ESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPE 66
           + LP GFRF PTDEELI HYL  K+         I E+D+ K EPW LPG +  K  + E
Sbjct: 15  QYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRA--KMGEKE 72

Query: 67  WFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAP 126
           W+FF  RDRKYP GLR+NRATEAGYWKATGKDR I S K  T A +GMKKTLVFY+GRAP
Sbjct: 73  WYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSK--TCALVGMKKTLVFYKGRAP 130

Query: 127 KGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRK 165
           KGE++NW+MHEYR   +      ++ S+  +V+ R+F+K
Sbjct: 131 KGEKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQK 169

Transcription activator of STM and KNAT6. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for the fusion of septa of gynoecia along the length of the ovaries. Activates the shoot formation in callus in a STM-dependent manner. Controls leaf margin development and required for leaf serration. Involved in axillary meristem initiation and separation of the meristem from the main stem. Regulates the phyllotaxy throughout the plant development. Seems to act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SV87|BRN2_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1

 Score =  181 bits (460), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 89/166 (53%), Positives = 116/166 (69%), Gaps = 7/166 (4%)

Query: 1   MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVI 60
           M   S   +P GFRF PTDEEL+++YL+ KI+ +  E+EVI E+D+ KLEPWDL     I
Sbjct: 1   MGSSSNGGVPPGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERCKI 60

Query: 61  -KTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLV 119
             T   EW+FF  +DRKYP G R+NRAT AG+WKATG+D+ IR+    +   IGM+KTLV
Sbjct: 61  GSTPQNEWYFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIRN----SYKKIGMRKTLV 116

Query: 120 FYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRK 165
           FY+GRAP G++T+WIMHEYR   ED  D    PS+  +V+CR+F K
Sbjct: 117 FYKGRAPHGQKTDWIMHEYR--LEDADDPQANPSEDGWVVCRVFMK 160

Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FWX2|NAC7_ARATH NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2

 Score =  179 bits (454), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 80/162 (49%), Positives = 115/162 (70%), Gaps = 9/162 (5%)

Query: 5   SMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTED 64
           S   +P GFRF PTDEEL+++YLR K+  +  E++ I +ID+ K+EPWDL  L  I  E+
Sbjct: 3   SFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEE 62

Query: 65  -PEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRG 123
             +W+FF  +D+KYP G R+NRAT+AG+WKATG+D+ I  R    ++ IGM+KTLVFY+G
Sbjct: 63  QSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLR----HSLIGMRKTLVFYKG 118

Query: 124 RAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRK 165
           RAP G++++WIMHEYR       D +  P +  +V+CR+F+K
Sbjct: 119 RAPNGQKSDWIMHEYRLE----TDENGTPQEEGWVVCRVFKK 156

Transcription factor probably involved in xylem formation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7GCL7|NAC74_ORYSJ NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1

 Score =  178 bits (451), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 85/157 (54%), Positives = 105/157 (66%), Gaps = 6/157 (3%)

Query: 9   LPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEWF 68
           LP GF F P D ELI+HYL+ KI+G+  E E+IPE+D+ K EPWDLP    + T+D +W 
Sbjct: 9   LPPGFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWH 68

Query: 69  FFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKG 128
           FF  RDRKYPNG RSNRAT AGYWK+TGKDR I+  K      IG KKTLVF+ GR P G
Sbjct: 69  FFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGK----QTIGTKKTLVFHEGRPPTG 124

Query: 129 ERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRK 165
            RT WIMHEY     +    +    + A+VLCR+ ++
Sbjct: 125 RRTEWIMHEYYIDEREC--QACPDMKDAYVLCRITKR 159

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score =  173 bits (438), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 82/158 (51%), Positives = 113/158 (71%), Gaps = 10/158 (6%)

Query: 9   LPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVI-KTEDPEW 67
           +P GFRF PTDEEL+++YL+ KI+    E+EVI E+D+ K+EPWDL     I  T   EW
Sbjct: 8   VPPGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWDLQDRCKIGSTPQNEW 67

Query: 68  FFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPK 127
           +FF  +DRKYP G R+NRAT +G+WKATG+D+ IR+    +   IGM+KTLVFY+GRAP 
Sbjct: 68  YFFSHKDRKYPTGSRTNRATHSGFWKATGRDKCIRN----SYKKIGMRKTLVFYKGRAPH 123

Query: 128 GERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRK 165
           G++T+WIMHEYR     + D+   P +  +V+CR+F+K
Sbjct: 124 GQKTDWIMHEYR-----IEDTEDDPCEDGWVVCRVFKK 156

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FRV4|NAC54_ARATH Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1

 Score =  172 bits (435), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 82/154 (53%), Positives = 107/154 (69%), Gaps = 4/154 (2%)

Query: 9   LPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEWF 68
           +P GFRF PTDEELI +YL  K+   +     I ++D+ K EPW+LP     K  + EW+
Sbjct: 20  MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELP--EKAKMGEKEWY 77

Query: 69  FFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKG 128
           FF  RDRKYP GLR+NRATEAGYWKATGKDR I+S K  T + +GMKKTLVFY+GRAPKG
Sbjct: 78  FFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSK--TKSLLGMKKTLVFYKGRAPKG 135

Query: 129 ERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRL 162
           E++ W+MHEYR   +      +  ++  +VLC++
Sbjct: 136 EKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKV 169

Transcription activator of STM and KNAT6. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for the fusion of septa of gynoecia along the length of the ovaries. Activates the shoot formation in callus in a STM-dependent manner. Seems to act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  170 bits (431), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/203 (44%), Positives = 119/203 (58%), Gaps = 8/203 (3%)

Query: 8   SLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEW 67
           +LP GFRF PTDEEL+ HYL  K+  +   V +I E+D+ KL+PWDLP  ++   +  EW
Sbjct: 20  NLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRK--EW 77

Query: 68  FFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPK 127
           +FF PRDRKYPNG R NRA   GYWKATG D+ +  +  G+   +G+KK LVFY G+AP+
Sbjct: 78  YFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPK--GSARTVGIKKALVFYSGKAPR 135

Query: 128 GERTNWIMHEYRPTREDLLDSSTKPSQA--AFVLCRLFRKPE--EKVDVLKYDEVEQTES 183
           G +T+WIMHEYR    D      K SQ    +VLCRL+ K    EKV + + D      +
Sbjct: 136 GVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEKVKLEQQDVASVAAA 195

Query: 184 PDTNKSSLDDTSSDLVQETAMSN 206
              N    +    D      MS+
Sbjct: 196 APRNHHHQNGEVMDAAAADTMSD 218

Oryza sativa subsp. japonica (taxid: 39947)

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score =  170 bits (431), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 87/171 (50%), Positives = 115/171 (67%), Gaps = 16/171 (9%)

Query: 1   MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVI 60
           M V S  +LP GFRF PTDEELI +YLR +   +   V +IPE+D+ K +PW LP     
Sbjct: 1   MEVTSQSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPE---- 56

Query: 61  KTE--DPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTL 118
           KTE  + EW+FF PR+RKYPNG+R NRA  +GYWKATG D+ I S     ++ +G+KK L
Sbjct: 57  KTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHS----GSSNVGVKKAL 112

Query: 119 VFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAA----FVLCRLFRK 165
           VFY+GR PKG +T+WIMHEYR    D   +STK + +     +VLCR+++K
Sbjct: 113 VFYKGRPPKGIKTDWIMHEYR--LHDSRKASTKRNGSMRLDEWVLCRIYKK 161

May function in the transition between active cell division and cell expansion.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	536
297742478	632	unnamed protein product [Vitis vinifera]	0.972	0.824	0.540	1e-144
224061527	537	NAC domain protein, IPR003441 [Populus t	0.957	0.955	0.537	1e-143
255555833	615	transcription factor, putative [Ricinus	0.880	0.767	0.495	1e-133
302399031	850	NAC domain class transcription factor [M	0.934	0.589	0.511	1e-132
359474176	620	PREDICTED: uncharacterized protein LOC10	0.927	0.801	0.496	1e-129
224115462	429	NAC domain protein, IPR003441 [Populus t	0.763	0.953	0.498	1e-123
186516558	534	NAC transcription factor-like 9 [Arabido	0.835	0.838	0.453	1e-107
334187196	533	NAC transcription factor-like 9 [Arabido	0.835	0.840	0.453	1e-107
42567421	512	NAC transcription factor-like 9 [Arabido	0.835	0.875	0.453	1e-107
297851744	647	ANAC014 [Arabidopsis lyrata subsp. lyrat	0.910	0.754	0.443	1e-105

>gi|297742478|emb|CBI34627.3| unnamed protein product [Vitis vinifera]

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 306/566 (54%), Positives = 364/566 (64%), Gaps = 45/566 (7%)

Query: 1   MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVI 60
           M  +SMESLPLGFRFRPTDEELINHYL+LKI GR SEVEVI E+DVCK EPWDLPGLS+I
Sbjct: 1   MGAVSMESLPLGFRFRPTDEELINHYLKLKIEGRHSEVEVIRELDVCKWEPWDLPGLSMI 60

Query: 61  KTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVF 120
           K +DPEWFFFCPRDRKYPNG RSNRAT+AGYWKATGKDRTI+SRK  ++A IGMKKTLVF
Sbjct: 61  KADDPEWFFFCPRDRKYPNGRRSNRATDAGYWKATGKDRTIKSRK--SSASIGMKKTLVF 118

Query: 121 YRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQ 180
           Y+GRAPKG+RTNWI HEYR     ++DS++  SQ A+VL RLF KP E++D  KYDEVE 
Sbjct: 119 YKGRAPKGQRTNWIFHEYR-----VIDSASDSSQGAYVLFRLFYKPNERIDNPKYDEVEP 173

Query: 181 TE-SPDTNKSSLDDTSSDLVQETAMSNY-------------------VTPNAVLPVESCG 220
           T  SP T KSS  DTSSDLVQET MS+                    VTP A +PVESC 
Sbjct: 174 TGLSPVTTKSSPGDTSSDLVQETEMSDTPTGGESENFERWLNDKSDNVTPTAPVPVESCC 233

Query: 221 NSHITSDVEDH--STGGTVLEEYQVPGEILNQFDMPSNGQIDCKIFSPVQSQIHPDIA-A 277
           N +I SDVEDH       V E Y   GE    +D    GQIDCK+FSP +SQ++P++A A
Sbjct: 234 NGYIPSDVEDHVAEVEEQVSEVYPPLGEDSRSYD----GQIDCKVFSP-ESQLYPELATA 288

Query: 278 YMDSPFASDFGNDHFGLNFKDGAGELDVSLTELFDEVFNYQDEFSCAESINQKELDVKSE 337
           YM SPF+SDFG+   GL F+DG  E +V LTE +DE+FN  DE S  ES ++K   V SE
Sbjct: 289 YMGSPFSSDFGDGQTGLRFQDGVSEPEVCLTEFWDEIFNNHDECSGEESNSKKNSAVGSE 348

Query: 338 VQLPGQVYMPQTISPRNFHAQDNGTCSDTDTDMSQVQQCDLVMGSSRLFSEHVESKDLLQ 397
             +PGQV +       + H ++ G+ SDTDTDM+Q+ Q D  M +S+   E++  KD LQ
Sbjct: 349 TLVPGQVSLLPNRPHGDSHTKNGGSNSDTDTDMAQM-QYDPEMRASKWSDEYIVGKDHLQ 407

Query: 398 APSCFGSCQAEASLNDQEIGKGTICDYGDNSA---VQVASSAVGSLYGNLNNYDLSPTLN 454
                G  Q +AS +  E   G I   GD+S       A SA+ SL   LNN + S T  
Sbjct: 408 MDVSPGYHQPQASFHFPEFKSGNIGALGDDSIGRDASSAVSAMASLDALLNNLEESSTQK 467

Query: 455 NSVNYGGDFAVGTGIKIRTRQPQQRPNSFNSVNQGTAQRRLRLQVTLSPPMVGGDKQ--- 511
           N VNYGGD   GTGIKIRTRQP QR    N V QG A RR+RLQ+         D+Q   
Sbjct: 468 NHVNYGGDPVGGTGIKIRTRQPLQRQMPDNFVTQGIAPRRIRLQMHKVMYASSNDEQEAQ 527

Query: 512 ---KDLGHSVEDDEVQSGVTKVEITG 534
              K++G   E      G  K  I G
Sbjct: 528 PTLKEVGEGREHPPTSDGPEKESIVG 553

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061527|ref|XP_002300524.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222847782|gb|EEE85329.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 297/553 (53%), Positives = 360/553 (65%), Gaps = 40/553 (7%)

Query: 2   AVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIK 61
           A++SM+SLPLGFRFRPTDEELI+HYLRLKINGRDSEVEVIPEIDVCK EPWDLPG SVIK
Sbjct: 1   AMVSMDSLPLGFRFRPTDEELISHYLRLKINGRDSEVEVIPEIDVCKWEPWDLPGQSVIK 60

Query: 62  TEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRK-AGTNACIGMKKTLVF 120
           T+DPEWFFFCPRDRKYPNG RSNRAT+AGYWKATGKDRTI+SRK AG    IGMKKTLVF
Sbjct: 61  TDDPEWFFFCPRDRKYPNGHRSNRATDAGYWKATGKDRTIKSRKSAGNTTLIGMKKTLVF 120

Query: 121 YRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQ 180
           YRGRAPKG+RTNWIMHEYRPT EDL    T P Q AFVL RLFRKPEE+ + +KYDE+EQ
Sbjct: 121 YRGRAPKGKRTNWIMHEYRPTEEDL--DGTGPGQVAFVLFRLFRKPEERTNGVKYDEIEQ 178

Query: 181 T-ESPDTNKSSLDDTSSDLVQETAMSNY------------------VTPNAVLPVESCGN 221
              SP   KSS D+ SSDLVQETA S+                   VT N+V PV+ C N
Sbjct: 179 IGYSPTAAKSSPDNASSDLVQETATSDMHSGKQSEDIKMWLTESDNVTANSVGPVDICSN 238

Query: 222 SHITSDVEDHSTGGTVLEEYQVPGEILNQFDMPSNGQIDCKIFSPVQSQIHPDIAAYMDS 281
            H TSD+ED     T +E   +  E  +    P +G++D ++FSPVQS I  D+  Y+DS
Sbjct: 239 RHATSDIEDQVPEATAVEACPLLDE-SSLIHEPVSGELDREVFSPVQSHIPADLGCYIDS 297

Query: 282 PFASDFGNDHFGLNFKDGAGELDVSLTELFDEVFNYQDEFSCAESINQKELDVKSEVQLP 341
           P+ASDFGND  G  F+D + E DVS+TEL D  FN  DE S  E  ++  L V SE QL 
Sbjct: 298 PYASDFGNDQNGFPFQDVSIEQDVSITELLDRFFNNHDECS-GEETSKNNLGVGSETQLC 356

Query: 342 GQVYMPQTISPRNFHAQDNGTCSDTDTDMSQVQQCDLVMGSSRLFSEHVESKDLLQAPSC 401
           GQ      I P N +A DNG  S     M+ +Q   L M      S+   S +L Q    
Sbjct: 357 GQ------IPPGNSYAPDNGIYS----FMNNLQHVSL-MRVPAWPSDQFCSNELFQMQPA 405

Query: 402 FGSCQAEASLNDQEIGKGTICDYGDNSAVQVASSAVGSL--YGNLNNYDLSPTLNNSVNY 459
            G+ +A   +   E+G+G I  +G+N   Q A SA  ++  +G LN+ + + +   SV+ 
Sbjct: 406 LGTLRAPTPVFYGELGRGNISHFGNNFVGQDAPSAKSAISSFGVLNSMEEATSQMTSVDN 465

Query: 460 GGDFAVGTGIKIRTRQPQQRPNSFNSVNQGTAQRR--LRLQVTLSPPMVGGDKQKDLGHS 517
           G   + GTGI+IR RQP+ RP S   + QG+  RR  L+LQ  L    VG  K KD G+ 
Sbjct: 466 GSGVS-GTGIRIRARQPRVRPQSDIFIAQGSGPRRILLQLQTKLLSESVGYCKVKDAGYI 524

Query: 518 VEDDEVQSGVTKV 530
            ++DEVQS VT+V
Sbjct: 525 EDEDEVQSSVTEV 537

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555833|ref|XP_002518952.1| transcription factor, putative [Ricinus communis] gi|223541939|gb|EEF43485.1| transcription factor, putative [Ricinus communis]

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 283/571 (49%), Positives = 342/571 (59%), Gaps = 99/571 (17%)

Query: 1   MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVI 60
           MAV+ MESLPLGFRFRPTDEELINHYLRLKINGRDSEV+VI E+DVCK EPWDLPGLSVI
Sbjct: 1   MAVLHMESLPLGFRFRPTDEELINHYLRLKINGRDSEVDVISEVDVCKWEPWDLPGLSVI 60

Query: 61  KTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTN-ACIGMKKTLV 119
           KT+DPEWFFFCPRDRKYPNG RSNRAT+AGYWKATGKDRTIR+RK+G+N  CIGMKKTLV
Sbjct: 61  KTDDPEWFFFCPRDRKYPNGQRSNRATDAGYWKATGKDRTIRARKSGSNPICIGMKKTLV 120

Query: 120 FYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVE 179
           FYRGRAPKGERTNWIMHEYRPT +D LD S    Q  +                      
Sbjct: 121 FYRGRAPKGERTNWIMHEYRPTLKD-LDGSAPGQQTGY---------------------- 157

Query: 180 QTESPDTNKSSLDDTSSDLVQETAM-------------------SNYVTPNAVLPVESCG 220
              SP T+KSS DDTSSD+VQET                     S+ +  +A L V+SC 
Sbjct: 158 ---SPTTSKSSPDDTSSDIVQETETSVMQVGKQSEGITSWTVDDSDNMISSASLHVDSCC 214

Query: 221 NSHITSDVEDHSTGGTVL-----------------EEYQVPGEILNQFDMPSNGQIDCKI 263
           NSH  S+VEDH+   T L                   Y    E  N F+ P  G+IDCK+
Sbjct: 215 NSH--SEVEDHAAEATALGVSTRLYCYWNSIGHCIRVYPPLEEDSNLFE-PMTGEIDCKV 271

Query: 264 FSPVQSQIHPDIAAYMDSPFASDFGNDHFGLNFKDGAGELDVSLTELFDEVFNYQDEFSC 323
           FSP+    H  +A YMDSP+A DFGND  G NF DG  E DVSLTEL  EVFN  D++S 
Sbjct: 272 FSPMPYDTHAGLAHYMDSPYACDFGNDDNGFNFMDGTSEPDVSLTELLGEVFNNNDDYSG 331

Query: 324 AESINQKELDVKSEVQLPGQVYMPQTISPRNFHAQDNGTCSDTDTDMSQVQQCDLVMGSS 383
                 K   V SE QLP +      I  +NFH +DNG  ++T+  M+QVQ         
Sbjct: 332 ERLTTLKNSIVGSETQLPAR------IPWQNFHIKDNGAYNETNKGMAQVQ--------- 376

Query: 384 RLFSEHVESKDLLQAPSCFGSCQAEASLNDQEIGKGTICDYGDNSAVQVASSAVGSLYGN 443
                       +QA   +G  + + S  D+E+G+  ICD G  S  Q A SA+ ++  +
Sbjct: 377 ------------MQA--SYGYWRTQTSSFDEELGRSNICDLGHESVKQDAPSALSAVGPS 422

Query: 444 LNNY-DLSPTLNNSVNYGGDFAV-GTGIKIRTRQPQQRPNSFNSVNQGTAQRRLRLQVTL 501
            N + D+  ++          AV GTGIKIRTRQPQ R ++ N  +QGTA RRLRLQ+ +
Sbjct: 423 FNLFNDMEESIKELSPGNQRSAVGGTGIKIRTRQPQVRSHADNFASQGTAPRRLRLQMKI 482

Query: 502 SPPMVGGDKQKDLGHSV--EDDEVQSGVTKV 530
           +    G   ++D  H    ++DEVQSG T+ 
Sbjct: 483 ATVPAGKGVERDASHRSLGDEDEVQSGATEA 513

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302399031|gb|ADL36810.1| NAC domain class transcription factor [Malus x domestica]

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 286/559 (51%), Positives = 348/559 (62%), Gaps = 58/559 (10%)

Query: 1   MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVI 60
           MA +SMESLPLGFRFRPTDEELINHYLRLKINGRDSEV VIPEIDVC+ EPWDLP LSVI
Sbjct: 1   MAELSMESLPLGFRFRPTDEELINHYLRLKINGRDSEVRVIPEIDVCRWEPWDLPKLSVI 60

Query: 61  KTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRK----AGTNACIGMKK 116
           K++D EWFFFCPRDRKYPNG RSNRAT+AGYWKATGKDRTI+SR+    + +N  +GMKK
Sbjct: 61  KSDDQEWFFFCPRDRKYPNGHRSNRATDAGYWKATGKDRTIKSRQCKSASNSNGQVGMKK 120

Query: 117 TLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYD 176
           TLVFYRGRAPKGERT+WIMHEYR T+++L    T P Q AFVLCRLF KPEEK DV KYD
Sbjct: 121 TLVFYRGRAPKGERTSWIMHEYRATQKEL--DGTGPGQGAFVLCRLFHKPEEKADVPKYD 178

Query: 177 EVEQTE-SPDTNKSSLDDTSSDLVQETAM-------------------SNYVTPNAVLPV 216
           EVEQT  SP T KSS D+ SSD++QETA                    S+ VTP+A+ P+
Sbjct: 179 EVEQTGLSPTTTKSSPDE-SSDIIQETATSEIQGENQAEGIMRWLTDNSDNVTPDALPPL 237

Query: 217 ESCGNSHITSDVEDHST------GGTVLEEYQVPGEILNQFDMPSNGQIDCKIFSPVQSQ 270
                  + SDVED         G   +EE     E L        G IDCK+F+P+ SQ
Sbjct: 238 PDI---FMASDVEDQGAVETGIQGHLTIEENPAFYESL-------GGPIDCKVFTPLHSQ 287

Query: 271 IHPDIAAYMDSPFASDFGNDHFGLNFKDGAGELDVSLTELFDEVFNYQDEFSCAESINQK 330
           I+ ++  +M SPF SDFGN   GL F+DG  E DVSLTEL DE  N   E SC ES +QK
Sbjct: 288 INAELEHFMGSPFTSDFGNYDNGLYFQDGTCEQDVSLTELLDEFGNSHYESSCEESTSQK 347

Query: 331 ELDVKSEVQLPGQVYMPQTISPRNFHAQDNGTCSDTDTDMSQVQQCDLVMGSSRLFSEHV 390
            L V +E  L G      T  P N  +  NG   +TD +++   Q DL   +S L++E  
Sbjct: 348 NLVVGNETYLSGNAC---TTLPVN--SCFNGAWDNTDANIT---QHDLQRMASGLYNEQF 399

Query: 391 ESKDLLQAPSCFGSCQAEASLNDQEIGKGTICDYGDNSAVQVASSAVGSLYGNLNNYDLS 450
            S DL      +   +A+ASL+DQ+   G + D   +         V S+   L++    
Sbjct: 400 GSDDLQNTSFGYWQAEAQASLDDQKPRMGNMADGYLSECSFAEQFPVSSVDDGLDD---- 455

Query: 451 PTLNNSVNYGGDFAVGTGIKIRTRQPQQRPNSFNSVNQGTAQRRLRLQVTLSPPMVGGDK 510
              + S N+G D   GTGIKIR R PQ +PN+ N V QGTA RR+ L V  S        
Sbjct: 456 ---STSWNHGVDHVGGTGIKIRARGPQLQPNTDNFVYQGTAARRIYLSVDRSSGSNTNGN 512

Query: 511 QKDLGHSVEDDEVQSGVTK 529
           + +  +S E+DEVQS +T+
Sbjct: 513 EGNENYSREEDEVQSTITQ 531

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474176|ref|XP_002271618.2| PREDICTED: uncharacterized protein LOC100249546 [Vitis vinifera]

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 287/578 (49%), Positives = 345/578 (59%), Gaps = 81/578 (14%)

Query: 1   MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVI 60
           M  +SMESLPLGFRFRPTDEELINHYL+LKI GR SEVEVI E+DVCK EPWDLPGLS+I
Sbjct: 1   MGAVSMESLPLGFRFRPTDEELINHYLKLKIEGRHSEVEVIRELDVCKWEPWDLPGLSMI 60

Query: 61  KTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVF 120
           K +DPEWFFFCPRDRKYPNG RSNRAT+AGYWKATGKDRTI+SRK  ++A IGMKKTLVF
Sbjct: 61  KADDPEWFFFCPRDRKYPNGRRSNRATDAGYWKATGKDRTIKSRK--SSASIGMKKTLVF 118

Query: 121 YRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQ 180
           Y+GRAPKG+RTNWI HEYR     ++DS++  SQ   +                      
Sbjct: 119 YKGRAPKGQRTNWIFHEYR-----VIDSASDSSQPTGL---------------------- 151

Query: 181 TESPDTNKSSLDDTSSDLVQETAMSNY-------------------VTPNAVLPVESCGN 221
             SP T KSS  DTSSDLVQET MS+                    VTP A +PVESC N
Sbjct: 152 --SPVTTKSSPGDTSSDLVQETEMSDTPTGGESENFERWLNDKSDNVTPTAPVPVESCCN 209

Query: 222 SHITSDVEDHS---------------TGGTVLEEYQVPGEILNQFDMPSNGQIDCKIFSP 266
            +I SDVEDH                +     + Y   GE    +D    GQIDCK+FSP
Sbjct: 210 GYIPSDVEDHVAEVEEQVSEVRNRDFSLSLCFKVYPPLGEDSRSYD----GQIDCKVFSP 265

Query: 267 VQSQIHPDIA-AYMDSPFASDFGNDHFGLNFKDGAGELDVSLTELFDEVFNYQDEFSCAE 325
            +SQ++P++A AYM SPF+SDFG+   GL F+DG  E +V LTE +DE+FN  DE S  E
Sbjct: 266 -ESQLYPELATAYMGSPFSSDFGDGQTGLRFQDGVSEPEVCLTEFWDEIFNNHDECSGEE 324

Query: 326 SINQKELDVKSEVQLPGQVYMPQTISPRNFHAQDNGTCSDTDTDMSQVQQCDLVMGSSRL 385
           S ++K   V SE  +PGQV +       + H ++ G+ SDTDTDM+Q+ Q D  M +S+ 
Sbjct: 325 SNSKKNSAVGSETLVPGQVSLLPNRPHGDSHTKNGGSNSDTDTDMAQM-QYDPEMRASKW 383

Query: 386 FSEHVESKDLLQAPSCFGSCQAEASLNDQEIGKGTICDYGDNSA---VQVASSAVGSLYG 442
             E++  KD LQ     G  Q +AS +  E   G I   GD+S       A SA+ SL  
Sbjct: 384 SDEYIVGKDHLQMDVSPGYHQPQASFHFPEFKSGNIGALGDDSIGRDASSAVSAMASLDA 443

Query: 443 NLNNYDLSPTLNNSVNYGGDFAVGTGIKIRTRQPQQRPNSFNSVNQGTAQRRLRLQVTLS 502
            LNN + S T  N VNYGGD   GTGIKIRTRQP QR    N V QG A RR+RLQ+   
Sbjct: 444 LLNNLEESSTQKNHVNYGGDPVGGTGIKIRTRQPLQRQMPDNFVTQGIAPRRIRLQMHKV 503

Query: 503 PPMVGGDKQ------KDLGHSVEDDEVQSGVTKVEITG 534
                 D+Q      K++G   E      G  K  I G
Sbjct: 504 MYASSNDEQEAQPTLKEVGEGREHPPTSDGPEKESIVG 541

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115462|ref|XP_002317040.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222860105|gb|EEE97652.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 264/530 (49%), Positives = 309/530 (58%), Gaps = 121/530 (22%)

Query: 4   ISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTE 63
           + ++SLPLGFRFRPTDEELI+HYLRLKINGRDSEVEVIPEID+CK EPWDLPGLSVIKT+
Sbjct: 1   VPVDSLPLGFRFRPTDEELISHYLRLKINGRDSEVEVIPEIDICKWEPWDLPGLSVIKTD 60

Query: 64  DPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRK-AGTNACIGMKKTLVFYR 122
           DPEWFFFCPRDRKYPNG RSNRATEAGYWKATGKDRTI+SRK AG    IGMKKTLVFYR
Sbjct: 61  DPEWFFFCPRDRKYPNGHRSNRATEAGYWKATGKDRTIKSRKSAGNTTLIGMKKTLVFYR 120

Query: 123 GRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQTE 182
           GRAP G+RTNW+MHEYRPT +DL    T P Q AFVL RLFRKPEE+  ++KYDE+EQT 
Sbjct: 121 GRAPNGKRTNWVMHEYRPTEKDL--DGTGPGQGAFVLFRLFRKPEERPSIVKYDEIEQTA 178

Query: 183 -SPDTNKSSLDDTSSDLVQETAMS------------------NYVTPNAVLPVESCGNSH 223
            S    KSS DD SSDLVQETA S                  + +T NAV+P++SC NS 
Sbjct: 179 YSTTAAKSSPDDASSDLVQETATSEMSSGKQPEDIKMWSTESDNMTSNAVVPIDSCSNSR 238

Query: 224 ITSDVEDHSTGGTVLEEYQVPGEILNQFDMPSNGQIDCKIFSPVQSQIHPDIAAYMDSPF 283
            TSDVED                                       QI  D+  YMDSP+
Sbjct: 239 ATSDVED---------------------------------------QIPVDLGYYMDSPY 259

Query: 284 ASDFGNDHFGLNFKDGAGELDVSLTELFDEVFNYQDEFSCAESINQKELDVKSEVQLPGQ 343
           ASDFGN+  G +F DG  E DVSLTEL D+  N  D++S  E+ +Q  L V SE QL GQ
Sbjct: 260 ASDFGNNQNGFSFLDGTSEQDVSLTELLDDYLNNHDDYSGEETSSQNTLGVGSETQLFGQ 319

Query: 344 VYMPQTISPRNFHAQDNGTCSDTDTDMSQVQQCDLVMGSSRLFSEHVESKDLLQAPSCFG 403
           V       P NFH +D+G  +    ++ ++   D                    AP    
Sbjct: 320 V------PPGNFHVKDHGIYNGMAQELVKLWSFD--------------------APPA-- 351

Query: 404 SCQAEASLNDQEIGKGTICDYGDNSAVQVASSAVGSLYGNLNNYDLSPTLNNSVNYGGDF 463
                                  NSA+        S +   N+ +   +   SV+YG   
Sbjct: 352 -----------------------NSAI--------SSFDVYNSMEEPTSQMTSVDYGSGV 380

Query: 464 AVGTGIKIRTRQPQQRPNSFNSVNQGTAQRRLRLQVTLSPPMVGGDKQKD 513
           + GTGIKIRTRQPQ R +S N V QG+A RR+RL V  S   VG  K  D
Sbjct: 381 S-GTGIKIRTRQPQVRRHSDNLVAQGSAPRRIRLLVERSVESVGNFKVND 429

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186516558|ref|NP_001119122.1| NAC transcription factor-like 9 [Arabidopsis thaliana] gi|3367576|emb|CAA20028.1| NAM / CUC2 -like protein [Arabidopsis thaliana] gi|7270509|emb|CAB80274.1| NAM / CUC2-like protein [Arabidopsis thaliana] gi|332661134|gb|AEE86534.1| NAC transcription factor-like 9 [Arabidopsis thaliana]

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 243/536 (45%), Positives = 298/536 (55%), Gaps = 88/536 (16%)

Query: 1   MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVI 60
           M  +SMESLPLGFRFRPTDEEL+NHYLRLKINGR S+V VIP+IDVCK EPWDLP LSVI
Sbjct: 1   MGAVSMESLPLGFRFRPTDEELVNHYLRLKINGRHSDVRVIPDIDVCKWEPWDLPALSVI 60

Query: 61  KTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVF 120
           KT+DPEWFFFCPRDRKYPNG RSNRAT++GYWKATGKDR+I+S+K      IGMKKTLVF
Sbjct: 61  KTDDPEWFFFCPRDRKYPNGHRSNRATDSGYWKATGKDRSIKSKK----TLIGMKKTLVF 116

Query: 121 YRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQ 180
           YRGRAPKGERTNWIMHEYRPT +DL    T P Q+ +VLCRLF KP+++V+ +K DE   
Sbjct: 117 YRGRAPKGERTNWIMHEYRPTLKDL--DGTSPGQSPYVLCRLFHKPDDRVNGVKSDEAAF 174

Query: 181 TESPDTNKSSLDDTSSDLVQETAMSNYVTPNAVLPVESCGNSHITSDVEDHSTGGTVLEE 240
           T S   NK S DDTSSDLVQET  S+            CG +H  S  +     GT++E 
Sbjct: 175 TAS---NKYSPDDTSSDLVQETPSSDAAVEKPSDYSGGCGYAHSNSTAD-----GTMIE- 225

Query: 241 YQVPGEILNQFDMPSNGQIDCKIFSPVQSQIHPDIAAYMDSPFASDFGNDHFGLNFKDGA 300
              P E         N  + C +    + Q  P     MDS +A DF  D  G  F+DG 
Sbjct: 226 --APEE---------NLWLSCDL----EDQKAP--LPCMDSIYAGDFSYDEIGFQFQDGT 268

Query: 301 GELDVSLTELFDEVFNYQDEFSCAESINQKELDVKSEVQLPGQVYMPQTISPRNFHAQDN 360
            E DVSLTEL +EVFN  D+FSC ESI+++   V S   +     M Q+ +P +    D 
Sbjct: 269 SEPDVSLTELLEEVFNNPDDFSCEESISRENPAV-SPNGIFSSAKMLQSAAPEDAFFNDF 327

Query: 361 GTCSDTDTDMSQVQQCDLVMGSSRLFSEHVESKDLLQAPSCFGSCQAEASLNDQEIGKGT 420
              +DTD +M+Q+Q                                              
Sbjct: 328 MAFTDTDAEMAQLQ---------------------------------------------- 341

Query: 421 ICDYGDNSAVQVASSAVGSLYGNLNNYDLSPTLNNSVNYGGDFAVGTGIKIRTRQPQQRP 480
              YG         S   S Y +L   +     N   N       G GIKIR RQPQ R 
Sbjct: 342 ---YGSEGGASGWPSDTNSYYSDLVQQEQMINHNTENN----LTEGRGIKIRARQPQNR- 393

Query: 481 NSFNSVNQGTAQRRLRLQVTLSPPMVGGDKQKDLGHSVEDDEVQSGVTKVEITGQI 536
            S   +NQG A RR+RLQ+  S   V   ++ + GH+V  +  ++     E +G +
Sbjct: 394 QSTGLINQGIAPRRIRLQLQ-SNSEVKEREEVNEGHTVIPEAKEAAAKYSEKSGSL 448

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334187196|ref|NP_001190927.1| NAC transcription factor-like 9 [Arabidopsis thaliana] gi|332661135|gb|AEE86535.1| NAC transcription factor-like 9 [Arabidopsis thaliana]

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 243/536 (45%), Positives = 298/536 (55%), Gaps = 88/536 (16%)

Query: 1   MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVI 60
           M  +SMESLPLGFRFRPTDEEL+NHYLRLKINGR S+V VIP+IDVCK EPWDLP LSVI
Sbjct: 1   MGAVSMESLPLGFRFRPTDEELVNHYLRLKINGRHSDVRVIPDIDVCKWEPWDLPALSVI 60

Query: 61  KTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVF 120
           KT+DPEWFFFCPRDRKYPNG RSNRAT++GYWKATGKDR+I+S+K      IGMKKTLVF
Sbjct: 61  KTDDPEWFFFCPRDRKYPNGHRSNRATDSGYWKATGKDRSIKSKK----TLIGMKKTLVF 116

Query: 121 YRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQ 180
           YRGRAPKGERTNWIMHEYRPT +DL    T P Q+ +VLCRLF KP+++V+ +K DE   
Sbjct: 117 YRGRAPKGERTNWIMHEYRPTLKDL--DGTSPGQSPYVLCRLFHKPDDRVNGVKSDEAAF 174

Query: 181 TESPDTNKSSLDDTSSDLVQETAMSNYVTPNAVLPVESCGNSHITSDVEDHSTGGTVLEE 240
           T S   NK S DDTSSDLVQET  S+            CG +H  S  +     GT++E 
Sbjct: 175 TAS---NKYSPDDTSSDLVQETPSSDAAVEKPSDYSGGCGYAHSNSTAD-----GTMIE- 225

Query: 241 YQVPGEILNQFDMPSNGQIDCKIFSPVQSQIHPDIAAYMDSPFASDFGNDHFGLNFKDGA 300
              P E         N  + C +    + Q  P     MDS +A DF  D  G  F+DG 
Sbjct: 226 --APEE---------NLWLSCDL----EDQKAP--LPCMDSIYAGDFSYDEIGFQFQDGT 268

Query: 301 GELDVSLTELFDEVFNYQDEFSCAESINQKELDVKSEVQLPGQVYMPQTISPRNFHAQDN 360
            E DVSLTEL +EVFN  D+FSC ESI+++   V S   +     M Q+ +P +    D 
Sbjct: 269 SEPDVSLTELLEEVFNNPDDFSCEESISRENPAV-SPNGIFSSAKMLQSAAPEDAFFNDF 327

Query: 361 GTCSDTDTDMSQVQQCDLVMGSSRLFSEHVESKDLLQAPSCFGSCQAEASLNDQEIGKGT 420
              +DTD +M+Q+Q                                              
Sbjct: 328 MAFTDTDAEMAQLQ---------------------------------------------- 341

Query: 421 ICDYGDNSAVQVASSAVGSLYGNLNNYDLSPTLNNSVNYGGDFAVGTGIKIRTRQPQQRP 480
              YG         S   S Y +L   +     N   N       G GIKIR RQPQ R 
Sbjct: 342 ---YGSEGGASGWPSDTNSYYSDLVQQEQMINHNTENN----LTEGRGIKIRARQPQNR- 393

Query: 481 NSFNSVNQGTAQRRLRLQVTLSPPMVGGDKQKDLGHSVEDDEVQSGVTKVEITGQI 536
            S   +NQG A RR+RLQ+  S   V   ++ + GH+V  +  ++     E +G +
Sbjct: 394 QSTGLINQGIAPRRIRLQLQ-SNSEVKEREEVNEGHTVIPEAKEAAAKYSEKSGSL 448

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567421|ref|NP_567986.3| NAC transcription factor-like 9 [Arabidopsis thaliana] gi|332661133|gb|AEE86533.1| NAC transcription factor-like 9 [Arabidopsis thaliana]

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 243/536 (45%), Positives = 298/536 (55%), Gaps = 88/536 (16%)

Query: 1   MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVI 60
           M  +SMESLPLGFRFRPTDEEL+NHYLRLKINGR S+V VIP+IDVCK EPWDLP LSVI
Sbjct: 1   MGAVSMESLPLGFRFRPTDEELVNHYLRLKINGRHSDVRVIPDIDVCKWEPWDLPALSVI 60

Query: 61  KTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVF 120
           KT+DPEWFFFCPRDRKYPNG RSNRAT++GYWKATGKDR+I+S+K      IGMKKTLVF
Sbjct: 61  KTDDPEWFFFCPRDRKYPNGHRSNRATDSGYWKATGKDRSIKSKK----TLIGMKKTLVF 116

Query: 121 YRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQ 180
           YRGRAPKGERTNWIMHEYRPT +DL    T P Q+ +VLCRLF KP+++V+ +K DE   
Sbjct: 117 YRGRAPKGERTNWIMHEYRPTLKDL--DGTSPGQSPYVLCRLFHKPDDRVNGVKSDEAAF 174

Query: 181 TESPDTNKSSLDDTSSDLVQETAMSNYVTPNAVLPVESCGNSHITSDVEDHSTGGTVLEE 240
           T S   NK S DDTSSDLVQET  S+            CG +H  S  +     GT++E 
Sbjct: 175 TAS---NKYSPDDTSSDLVQETPSSDAAVEKPSDYSGGCGYAHSNSTAD-----GTMIE- 225

Query: 241 YQVPGEILNQFDMPSNGQIDCKIFSPVQSQIHPDIAAYMDSPFASDFGNDHFGLNFKDGA 300
              P E         N  + C +    + Q  P     MDS +A DF  D  G  F+DG 
Sbjct: 226 --APEE---------NLWLSCDL----EDQKAP--LPCMDSIYAGDFSYDEIGFQFQDGT 268

Query: 301 GELDVSLTELFDEVFNYQDEFSCAESINQKELDVKSEVQLPGQVYMPQTISPRNFHAQDN 360
            E DVSLTEL +EVFN  D+FSC ESI+++   V S   +     M Q+ +P +    D 
Sbjct: 269 SEPDVSLTELLEEVFNNPDDFSCEESISRENPAV-SPNGIFSSAKMLQSAAPEDAFFNDF 327

Query: 361 GTCSDTDTDMSQVQQCDLVMGSSRLFSEHVESKDLLQAPSCFGSCQAEASLNDQEIGKGT 420
              +DTD +M+Q+Q                                              
Sbjct: 328 MAFTDTDAEMAQLQ---------------------------------------------- 341

Query: 421 ICDYGDNSAVQVASSAVGSLYGNLNNYDLSPTLNNSVNYGGDFAVGTGIKIRTRQPQQRP 480
              YG         S   S Y +L   +     N   N       G GIKIR RQPQ R 
Sbjct: 342 ---YGSEGGASGWPSDTNSYYSDLVQQEQMINHNTENN----LTEGRGIKIRARQPQNR- 393

Query: 481 NSFNSVNQGTAQRRLRLQVTLSPPMVGGDKQKDLGHSVEDDEVQSGVTKVEITGQI 536
            S   +NQG A RR+RLQ+  S   V   ++ + GH+V  +  ++     E +G +
Sbjct: 394 QSTGLINQGIAPRRIRLQLQ-SNSEVKEREEVNEGHTVIPEAKEAAAKYSEKSGSL 448

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297851744|ref|XP_002893753.1| ANAC014 [Arabidopsis lyrata subsp. lyrata] gi|297339595|gb|EFH70012.1| ANAC014 [Arabidopsis lyrata subsp. lyrata]

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 245/553 (44%), Positives = 332/553 (60%), Gaps = 65/553 (11%)

Query: 2   AVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIK 61
           A++SME+LPLGFRFRPTDEELINHYLRLKINGRD EV VIPEIDVCK EPWDLPGLSVIK
Sbjct: 17  ALLSMEALPLGFRFRPTDEELINHYLRLKINGRDLEVRVIPEIDVCKWEPWDLPGLSVIK 76

Query: 62  TEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFY 121
           T+D EWFFFCPRDRKYP+G RSNRAT+ GYWKATGKDRTI+S+K      IGMKKTLVFY
Sbjct: 77  TDDQEWFFFCPRDRKYPSGHRSNRATDIGYWKATGKDRTIKSKK----LIIGMKKTLVFY 132

Query: 122 RGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQT 181
           RGRAP+GERTNWIMHEYR T ++L    T P Q  +VLCRLF KP +  D    +E+E  
Sbjct: 133 RGRAPRGERTNWIMHEYRATDKEL--DGTGPGQNPYVLCRLFHKPSDSCDPSNCEEIENV 190

Query: 182 ES-PDTNKSSLDDTSSDLVQETAMS-------------------NYVTPNAVLPVESCGN 221
            S P T + S DDTSS++VQET+ S                   N V P+  +   +  N
Sbjct: 191 NSTPTTTRCSPDDTSSEMVQETSTSGVHALDRSDDTERCLSDKGNDVKPDVSVINNTSVN 250

Query: 222 SHITSDVEDHSTGGTVLEEYQVPGEILNQFDMPSNGQIDCKIFSPVQSQIHPDIAAYMDS 281
              TS  +D   G +++EE  +  +I   +       +  K + P QS I     +++DS
Sbjct: 251 HAETSHAKDRVLGKSLVEENHLLRDIPTLY----GPILSEKSYYPGQSSI-SFATSHIDS 305

Query: 282 PFASDFGNDHFGLNFKDGAGELDVSLTELFDEVFNYQDEFSCAESINQKELDVKSEVQLP 341
            ++SDFGN  +GL+F+DGA E D SLT++ DEVF+  +E S      +K+  + + +  P
Sbjct: 306 MYSSDFGNCGYGLHFQDGASEQDASLTDVLDEVFHNHNESSS----ERKDFAIPNMMHWP 361

Query: 342 GQVYMPQTISPRNFHAQDNGTCSDTDTDMSQVQQCDLVMGSSRLFSEH-VESKDLLQAPS 400
           G   +  T  P     +D+    D   D+S  Q     + +SR  SEH ++SK++++  S
Sbjct: 362 GNTRLLSTEYP---FLKDSVAFLDGGADVSGPQHFVPDILASRWVSEHNLDSKEVVEIQS 418

Query: 401 CFGSCQAEASLNDQEIGKGTICDYGDNSAVQVASSAVGSLYGNLNNYDLSPTLNNSVN-Y 459
             GS +    L++   G             Q ASS+  ++  +  NY+++    +S   +
Sbjct: 419 SSGSSRTVTPLHNNVFG-------------QYASSSYATI--DPFNYNVNQPEQSSFELH 463

Query: 460 GGDFAVGTGIKIRTRQPQQRPNSFNSVNQGTAQRRLRLQVTLSPPM--VGGDKQKDLGHS 517
            G+ +   G   R+R+ Q   +S   V+QGTA RR+RLQ+   PP+  V   K++D   +
Sbjct: 464 PGNIS---GFNARSRENQTNLDSV--VDQGTAPRRIRLQI--EPPLTPVINKKERD-ADN 515

Query: 518 VEDDEVQSGVTKV 530
            E+DEVQS ++KV
Sbjct: 516 YEEDEVQSAMSKV 528

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	536
TAIR|locus:2128013	534	NTL9 "NAC transcription factor	0.419	0.421	0.665	8.2e-108
TAIR|locus:2037920	652	NAC014 "NAC 014" [Arabidopsis	0.927	0.762	0.440	1.7e-103
TAIR|locus:2114678	469	NAC062 "NAC domain containing	0.561	0.641	0.452	7.7e-70
TAIR|locus:2153899	451	TIP "TCV-interacting protein"	0.673	0.800	0.393	4.8e-62
TAIR|locus:2167155	476	NAC086 "NAC domain containing	0.501	0.565	0.442	1.3e-54
TAIR|locus:2009729	631	NAC028 "NAC domain containing	0.397	0.337	0.486	6.9e-53
TAIR|locus:2020123	301	NAC020 "NAC domain containing	0.481	0.857	0.420	2.9e-52
TAIR|locus:2097720	479	NAC045 "NAC domain containing	0.712	0.797	0.371	5.6e-52
TAIR|locus:2142285	292	NAC096 "NAC domain containing	0.516	0.948	0.401	8.3e-51
TAIR|locus:2089764	246	NAC057 "NAC domain containing	0.399	0.869	0.463	5.8e-50

TAIR|locus:2128013 NTL9 "NAC transcription factor-like 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 805 (288.4 bits), Expect = 8.2e-108, Sum P(3) = 8.2e-108
 Identities = 159/239 (66%), Positives = 182/239 (76%)

Query:     1 MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVI 60
             M  +SMESLPLGFRFRPTDEEL+NHYLRLKINGR S+V VIP+IDVCK EPWDLP LSVI
Sbjct:     1 MGAVSMESLPLGFRFRPTDEELVNHYLRLKINGRHSDVRVIPDIDVCKWEPWDLPALSVI 60

Query:    61 KTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVF 120
             KT+DPEWFFFCPRDRKYPNG RSNRAT++GYWKATGKDR+I+S+K      IGMKKTLVF
Sbjct:    61 KTDDPEWFFFCPRDRKYPNGHRSNRATDSGYWKATGKDRSIKSKKT----LIGMKKTLVF 116

Query:   121 YRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQ 180
             YRGRAPKGERTNWIMHEYRPT +DL    T P Q+ +VLCRLF KP+++V+ +K DE   
Sbjct:   117 YRGRAPKGERTNWIMHEYRPTLKDL--DGTSPGQSPYVLCRLFHKPDDRVNGVKSDEAAF 174

Query:   181 TESPDTNKSSLDDTSSDLVQETAMSNYVTPNAVLPVESCGNSHITSDVEDHSTGGTVLE 239
             T S   NK S DDTSSDLVQET  S+            CG +H  S  +     GT++E
Sbjct:   175 TAS---NKYSPDDTSSDLVQETPSSDAAVEKPSDYSGGCGYAHSNSTAD-----GTMIE 225

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0031347 "regulation of defense response" evidence=IMP

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=RCA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

GO:0008284 "positive regulation of cell proliferation" evidence=RCA

TAIR|locus:2037920 NAC014 "NAC 014" [Arabidopsis thaliana (taxid:3702)]

 Score = 980 (350.0 bits), Expect = 1.7e-103, Sum P(2) = 1.7e-103
 Identities = 244/554 (44%), Positives = 332/554 (59%)

Query:     2 AVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIK 61
             A++SME+LPLGFRFRPTDEELINHYLRLKINGRD EV VIPEIDVCK EPWDLPGLSVIK
Sbjct:    17 ALLSMEALPLGFRFRPTDEELINHYLRLKINGRDLEVRVIPEIDVCKWEPWDLPGLSVIK 76

Query:    62 TEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFY 121
             T+D EWFFFCPRDRKYP+G RSNRAT+ GYWKATGKDRTI+S+K      IGMKKTLVFY
Sbjct:    77 TDDQEWFFFCPRDRKYPSGHRSNRATDIGYWKATGKDRTIKSKKM----IIGMKKTLVFY 132

Query:   122 RGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQT 181
             RGRAP+GERTNWIMHEYR T ++L    T P Q  +VLCRLF KP +  D    +E+E+ 
Sbjct:   133 RGRAPRGERTNWIMHEYRATDKEL--DGTGPGQNPYVLCRLFHKPSDSCDPAHCEEIEKV 190

Query:   182 E-SPDTN-KSSLDDTSSDLVQETAMSNYVTPNAVLPVESC----GNSHITSDV------- 228
               +P T  + S DDTSS++VQETA S     +     E C    GN+ +  DV       
Sbjct:   191 NFTPTTTTRCSPDDTSSEMVQETATSGVHALDRSDDTERCLSDKGNNDVKPDVSVINNTS 250

Query:   229 ---------EDHSTGGTVLEEYQVPGEILNQFDMPS-NGQI-DCKIFSPVQSQIHPDIAA 277
                      +D + G T++EE      +L   D+P+ +G I   K + P QS I     +
Sbjct:   251 VNHAETSRAKDRNLGKTLVEE----NPLLR--DVPTLHGPILSEKSYYPGQSSIG-FATS 303

Query:   278 YMDSPFASDFGNDHFGLNFKDGAGELDVSLTELFDEVFNYQDEFSCAESINQKELDVKSE 337
             +MDS ++SDFGN  +GL+F+DGA E D SLT++ DEVF+  +E     S ++K+  + + 
Sbjct:   304 HMDSMYSSDFGNCDYGLHFQDGASEQDASLTDVLDEVFHNHNE----SSNDRKDFVLPNM 359

Query:   338 VQLPGQVYMPQTISPRNFHAQDNGTCSDTDTDMSQVQQCDLVMGSSRLFSE-HVESKDLL 396
             +  PG   +  T  P     +D+    D   ++S  QQ    + +SR  SE +V+SK+ +
Sbjct:   360 MHWPGNTRLLSTEYP---FLKDSVAFVDGSAEVSGSQQFVPDILASRWVSEQNVDSKEAV 416

Query:   397 QAPSCFGSCQAEASLNDQEIGKGTICDYGDNXXXXXXXXXXGSLYGNLNNYDLSPTLNNS 456
             +  S  GS +    L++   G+     Y  +                 ++++ S  ++ +
Sbjct:   417 EILSSTGSSRTLTPLHNNVFGQ-----YASSSYAAIDPFNYNVNQPEQSSFEQSH-VDRN 470

Query:   457 VNYGGDFAVGTGIKIRTRQPQQRPNSFNSVNQGTAQRRLRLQVTLSPPMVGGDKQKDLGH 516
             ++    F      K R+R+ Q+  +S   V+QGTA RR+RLQ+      V   K++D  +
Sbjct:   471 ISPSNIFE----FKARSRENQRDLDSV--VDQGTAPRRIRLQIEQPLTPVTNKKERDADN 524

Query:   517 SVEDDEVQSGVTKV 530
               E+DEVQS ++KV
Sbjct:   525 YEEEDEVQSAMSKV 538

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010050 "vegetative phase change" evidence=RCA

TAIR|locus:2114678 NAC062 "NAC domain containing protein 62" [Arabidopsis thaliana (taxid:3702)]

 Score = 652 (234.6 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
 Identities = 146/323 (45%), Positives = 201/323 (62%)

Query:     3 VISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKT 62
             V+SM+SLP+G RFRPTDEELI +YLR KING D +V+ I EID+CK EPWDLP  SVIKT
Sbjct:     7 VLSMDSLPVGLRFRPTDEELIRYYLRRKINGHDDDVKAIREIDICKWEPWDLPDFSVIKT 66

Query:    63 EDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYR 122
             +D EW +FCP DRKYP+G R NRAT AGYWKATGKDR I+S K  TN  IG+K+TLVF+ 
Sbjct:    67 KDSEWLYFCPLDRKYPSGSRQNRATVAGYWKATGKDRKIKSGK--TNI-IGVKRTLVFHA 123

Query:   123 GRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQTE 182
             GRAP+G RTNWI+HEYR T +DL  S T P Q+ FV+C+LF+K EE V   +  + ++ E
Sbjct:   124 GRAPRGTRTNWIIHEYRATEDDL--SGTNPGQSPFVICKLFKK-EELVLGEEDSKSDEVE 180

Query:   183 SPDTNKSSLDDTSSDLVQETAMSNYVTPNAVLP--VESCGNSHITSDVEDHSTGGTVLEE 240
              P  +  +++ T S+ V E   +  V  + +    +   G+SH  SD  D +T   +++ 
Sbjct:   181 EPAVSSPTVEVTKSE-VSEVIKTEDVKRHDIAESSLVISGDSH--SDACDEATTAELVDF 237

Query:   241 YQVPGEILNQFDMPSNGQIDCKIFSPVQSQIHPDIAAYMDSPFASDF-GNDH--FGLNFK 297
                P   L   D      +   + S VQS++      +   P +S+F GN++  F +  +
Sbjct:   238 KWYPE--LESLDFT----LFSPLHSQVQSELGSSYNTFQ--PGSSNFSGNNNNSFQIQTQ 289

Query:   298 DGAGELDVSLTELFDEVFNYQDE 320
              G  E+D  +++  D +    DE
Sbjct:   290 YGTNEVDTYISDFLDSILKSPDE 312

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009814 "defense response, incompatible interaction" evidence=IMP

GO:0070417 "cellular response to cold" evidence=IMP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2153899 TIP "TCV-interacting protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 156/396 (39%), Positives = 219/396 (55%)

Query:     1 MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVI 60
             M V+S+ SLP+GFRF PTDEEL+ +YLRLKING D++V VI EID+CK EPWDLP  SV+
Sbjct:     5 MEVLSLASLPVGFRFSPTDEELVRYYLRLKINGHDNDVRVIREIDICKWEPWDLPDFSVV 64

Query:    61 KTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVF 120
             KT D EW FFCP DRKYP+G R NRAT AGYWKATGKDR I+S   G    IG+K+TLVF
Sbjct:    65 KTTDSEWLFFCPLDRKYPSGSRMNRATVAGYWKATGKDRKIKS---GKTKIIGVKRTLVF 121

Query:   121 YRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLK-YDEVE 179
             Y GRAPKG RT WIMHEYR T +DL    TK  Q  FV+C+LF+K     D++    E E
Sbjct:   122 YTGRAPKGTRTCWIMHEYRATEKDL--DGTKSGQNPFVVCKLFKKQ----DIVNGAAEPE 175

Query:   180 QTESPDTNKSSLDDTSSDLVQETAMSNYVTPNAVLPVESCGNSHITSDVEDHSTGGTVLE 239
             +++S +   +    T  D V+ + +S  V P        C  +  +  +      G  + 
Sbjct:   176 ESKSCEVEPAVSSPTVVDEVEMSEVSP-VFPKTE-ETNPCDVAESSLVIPSECRSGYSVP 233

Query:   240 EYQVPGEILNQFDMPSNGQIDC-KIFSPVQSQIHPDIAAY---MDSPFASDFGNDHFG-L 294
             E    G  L+  D  S  + D  K+FSP+ SQ+  ++ +    + S  +  F N +   +
Sbjct:   234 EVTTTG--LDDIDWLSFMEFDSPKLFSPLHSQVQSELGSSFNGLQSESSELFKNHNEDYI 291

Query:   295 NFKDGAGELDVSLTELFDEVFN--YQDE--------FSCAESINQKE---LDVKSE-VQL 340
               + G  + D  +++  D   +  Y+ E         S    IN +    + +++   Q 
Sbjct:   292 QTQYGTNDADEYMSKFLDSFLDIPYEPEQIPYEPQNLSSCNKINDESKRGIKIRARRAQA 351

Query:   341 PG--QVYMPQTISPRNFHAQDNGTCSDTDTDMSQVQ 374
             PG  + ++ Q  + R    Q N     ++TD +Q+Q
Sbjct:   352 PGCAEQFVMQGDASRRLRLQVNLNSHKSETDSTQLQ 387

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=IDA

GO:0051607 "defense response to virus" evidence=IPI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2167155 NAC086 "NAC domain containing protein 86" [Arabidopsis thaliana (taxid:3702)]

 Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
 Identities = 128/289 (44%), Positives = 172/289 (59%)

Query:     8 SLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEW 67
             SLP GFRF PTDEELI +YL+ KING++ E+E+IPE+D+ K EPWDLPG S+I ++D EW
Sbjct:     5 SLPPGFRFHPTDEELITYYLKRKINGQEIELEIIPEVDLYKCEPWDLPGKSLIPSKDQEW 64

Query:    68 FFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPK 127
             FFF PRDRKYPNG R+NRAT+ GYWKATGKDR +  R    +  IG KKTLV+YRGRAP 
Sbjct:    65 FFFSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWR----DRAIGTKKTLVYYRGRAPH 120

Query:   128 GERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQTESPDTN 187
             G RT W+MHEYR   E   + S    Q A+ LCR+F+K    ++    D+ +Q   P  +
Sbjct:   121 GIRTGWVMHEYR-LDESECEPSAFGMQDAYALCRVFKKIV--IEAKPRDQHQQQHQPYVH 177

Query:   188 KSS-LDDTSS-DLVQETAMSNYVTPNAVLPVES-CGNSHITSDVEDHS-----TGGTVLE 239
              SS +  +SS D+  +  +S+    N    ++   GN++  SD +D S        T   
Sbjct:   178 TSSNISGSSSFDVCSDLEISSNTPYNTAAHIQPRFGNANAISDHDDWSQYLSQNMPTSFS 237

Query:   240 EYQVP-GEILNQFDMPSNGQIDCKIFSPVQSQIHPDIAAYMDSPFASDF 287
             +Y  P G  L Q  +  N ++ C++F    S   P +         SDF
Sbjct:   238 DYGSPYGPYLTQSKV--NTEVQCEMFQHQMSL--PPLRVENSQAQTSDF 282

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2009729 NAC028 "NAC domain containing protein 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 528 (190.9 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
 Identities = 111/228 (48%), Positives = 150/228 (65%)

Query:     8 SLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEW 67
             S+P GFRF PTDEEL+ +YL+ KINGR  E+E+IPEID+ K EPWDLPG S++ ++D EW
Sbjct:     5 SMPPGFRFHPTDEELVIYYLKRKINGRTIELEIIPEIDLYKCEPWDLPGKSLLPSKDLEW 64

Query:    68 FFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPK 127
             FFF PRDRKYPNG R+NRAT+AGYWKATGKDR + S     +  +G KKTLV+YRGRAP 
Sbjct:    65 FFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVTSH----SRMVGTKKTLVYYRGRAPH 120

Query:   128 GERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPE--EKVDVLKYDEVEQTESPD 185
             G RT+W+MHEYR   E   DS +   Q A+ LCR+F+K     K++  ++   ++ +   
Sbjct:   121 GSRTDWVMHEYR-LEEQECDSKSG-IQDAYALCRVFKKSALANKIEE-QHHGTKKNKGTT 177

Query:   186 TNKSSLDDT---SSDLVQETAMSNY-VTPNAVLPVESCGNSHITSDVE 229
              ++ S   T   S  + +    S Y V+P     +   GN+  +SD+E
Sbjct:   178 NSEQSTSSTCLYSDGMYENLENSGYPVSPETG-GLTQLGNNS-SSDME 223

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2020123 NAC020 "NAC domain containing protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 517 (187.1 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
 Identities = 114/271 (42%), Positives = 156/271 (57%)

Query:     8 SLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEW 67
             SLP GFRF PTDEEL+ +YL  K+NG+  E+E+IPE+D+ K EPWDLP  S +   D EW
Sbjct:     5 SLPPGFRFHPTDEELVAYYLDRKVNGQAIELEIIPEVDLYKCEPWDLPEKSFLPGNDMEW 64

Query:    68 FFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPK 127
             +F+  RD+KYPNG R+NRAT AGYWKATGKDRT+ S+K      +GMKKTLV+YRGRAP 
Sbjct:    65 YFYSTRDKKYPNGSRTNRATRAGYWKATGKDRTVESKKMK----MGMKKTLVYYRGRAPH 120

Query:   128 GERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQTESPDTN 187
             G RTNW+MHEYR T      SS K S A   LCR+F+K   ++   K +E E+ E   T+
Sbjct:   121 GLRTNWVMHEYRLTHAP--SSSLKESYA---LCRVFKK-NIQIPKRKGEE-EEAEEESTS 173

Query:   188 KSSLDDTSSDLVQETAMSNYVTPNAVLPVES-CGNSHITSDVEDHSTGGTVLEEYQVPGE 246
                 ++   +        NY+   ++    +   +S +T  V       + +        
Sbjct:   174 VGKEEEEEKEKKWRKCDGNYIEDESLKRASAETSSSELTQGVLLDEANSSSIFALHFSSS 233

Query:   247 ILNQFD-MPSNGQIDCKIFSPVQSQIHPDIA 276
             +L+  D + SN         P+Q Q  P ++
Sbjct:   234 LLDDHDHLFSNYSHQLPYHPPLQLQDFPQLS 264

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2097720 NAC045 "NAC domain containing protein 45" [Arabidopsis thaliana (taxid:3702)]

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 157/423 (37%), Positives = 212/423 (50%)

Query:     8 SLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEW 67
             SLP GFRF PTDEELI +YL+ KING + E+EVI E+D+ K EPWDLPG S++ ++D EW
Sbjct:     5 SLPPGFRFHPTDEELITYYLKRKINGLEIELEVIAEVDLYKCEPWDLPGKSLLPSKDQEW 64

Query:    68 FFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPK 127
             +FF PRDRKYPNG R+NRAT+ GYWKATGKDR +  R    +  IG KKTLV+YRGRAP 
Sbjct:    65 YFFSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWR----DRAIGTKKTLVYYRGRAPH 120

Query:   128 GERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKP--EEKVDVLKYDEVEQTESPD 185
             G RT W+MHEYR   E   + S    Q A+ LCR+F+K   E K        V    +  
Sbjct:   121 GIRTGWVMHEYR-LDETECEPSAYGMQDAYALCRVFKKIVIEAKPRDQHRSYVHAMSNVS 179

Query:   186 TNKSSLDDTSSDLVQETAMSNYVTPNAVLPVESCGNSHITSDVEDHSTGGTVLEEY-QVP 244
              N SS  DT SDL  E + + +   N   P    GN    S+   +       E++ Q  
Sbjct:   180 GNCSSSFDTCSDL--EISSTTHQVQNTFQP--RFGNERFNSNAISN-------EDWSQYY 228

Query:   245 GEILNQFDMPS--NGQIDCKIFSPVQSQIH-PDI----AAYMDSPFASDF--GNDH--FG 293
             G     F  P   N +I+C   S +Q  I+ P +    +A+ DS F +     NDH  F 
Sbjct:   229 GSSYRPFPTPYKVNTEIEC---SMLQHNIYLPPLRVENSAFSDSDFFTSMTHNNDHGVFD 285

Query:   294 -LNFKDGAGELDVSLTELFDEVFNYQDEFSCAESINQKELDVKSEVQLPGQVYMPQTISP 352
                F       + S+ +    V NY DE     + +  +     E ++     +  T   
Sbjct:   286 DFTFAASNSNHNNSVGDQVIHVGNY-DEQLITSNRHMNQTGYIKEQKIRSS--LDNTDED 342

Query:   353 RNFHAQDNGTCSDTDTDMS-QVQQCDLVMGSSRLFSEHVESKDLLQAPSCFGSCQAEASL 411
               FH  +     D D  +S  +   D V       +E V + + L + S F   + E   
Sbjct:   343 PGFHGNNTNDNIDIDDFLSFDIYNEDNVNQIED--NEDVNTNETLDS-SGFEVVEEETRF 399

Query:   412 NDQ 414
             N+Q
Sbjct:   400 NNQ 402

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2142285 NAC096 "NAC domain containing protein 96" [Arabidopsis thaliana (taxid:3702)]

 Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
 Identities = 116/289 (40%), Positives = 169/289 (58%)

Query:     9 LPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEWF 68
             LP GFRF PTDEELI +YL+ K+ G + E+EVIP ID+   +PW+LP  S +   D EW+
Sbjct:     6 LPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNRDMEWY 65

Query:    69 FFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKG 128
             FFC RD+KYPNG R+NR T+AGYWKATGKDR I SR   +++ IG +KTLVFY+GRAP G
Sbjct:    66 FFCSRDKKYPNGFRTNRGTKAGYWKATGKDRKITSR---SSSIIGYRKTLVFYKGRAPLG 122

Query:   129 ERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQTESPDTNK 188
             +R+NWIMHEYR   +D    S    + AFVLCR+  K E K +  K  ++   ++  + +
Sbjct:   123 DRSNWIMHEYRLCDDDTSQGSQN-LKGAFVLCRVAMKNEIKTNT-KIRKIPSEQTIGSGE 180

Query:   189 SS-LDDTSSDLVQETAMSNYVTPNAVLPVESCGNSHITSD-VEDHSTGGTVLEEYQVPGE 246
             SS L    +   ++  M  +   N V       N  I+ + + D S     +++  V  +
Sbjct:   181 SSGLSSRVTSPSRDETMPFHSFANPVSTETDSSNIWISPEFILDSSKDYPQIQD--VASQ 238

Query:   247 ILNQ-FDMPSNGQIDCKIFSPVQSQIHPDIAAYMDSPFASDFGNDHFGL 294
                Q FD P  G  + +   P  + +  ++  +M + + +++G D  GL
Sbjct:   239 CFQQDFDFPIIGNQNMEF--PASTSLDQNMDEFMQNGYWTNYGYDQTGL 285

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2089764 NAC057 "NAC domain containing protein 57" [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 103/222 (46%), Positives = 146/222 (65%)

Query:     9 LPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEWF 68
             LP GFRF PTDEEL+N+YL+ KING++ E+++IPE+D+ K EPWDL   S + + DPEW+
Sbjct:     6 LPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWDLAEKSFLPSRDPEWY 65

Query:    69 FFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKG 128
             FF PRDRKYPNG R+NRAT  GYWK+TGKDR + S+    +  IGMKKTLV+Y+GRAP+G
Sbjct:    66 FFGPRDRKYPNGFRTNRATRGGYWKSTGKDRRVTSQ----SRAIGMKKTLVYYKGRAPQG 121

Query:   129 ERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVEQTESPDTNK 188
              RT+W+MHEYR   +D  D S+   Q ++ LCR+F+K       L+ +   QT       
Sbjct:   122 IRTDWVMHEYRLDDKDCDDPSSL--QDSYALCRVFKK-NGICSELESERQLQTGQCSFTT 178

Query:   189 SSLDDTSSDLVQETAMSNYVTPNAVLPVESCGNSHITSDVED 230
             +S+++ +S+       ++Y T +  + V S     +  D +D
Sbjct:   179 ASMEEINSNN-NNNYNNDYETMSPEVGVSSACVEEVVDDKDD 219

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00000471001 SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (524 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	536
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	3e-82

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  251 bits (644), Expect = 3e-82
 Identities = 81/132 (61%), Positives = 101/132 (76%), Gaps = 5/132 (3%)

Query: 9   LPLGFRFRPTDEELINHYLRLKINGRDSEV-EVIPEIDVCKLEPWDLPGLSVIKTEDPEW 67
           LP GFRF PTDEEL+ +YL+ K+ G+   + +VIPE+D+ K EPWDLP     K  D EW
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPD-GKAKGGDREW 59

Query: 68  FFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPK 127
           +FF PRDRKYPNG R+NRAT +GYWKATGKD+ + S+       +GMKKTLVFY+GRAPK
Sbjct: 60  YFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEV---VGMKKTLVFYKGRAPK 116

Query: 128 GERTNWIMHEYR 139
           GE+T+W+MHEYR
Sbjct: 117 GEKTDWVMHEYR 128

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	536
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=5.8e-41  Score=302.21  Aligned_cols=127  Identities=57%  Similarity=1.113  Sum_probs=95.9

Q ss_pred             CCCcceEcCChHHHHHHHHHHHhCCCCCCc-eeeecccCCCCCCCCCCCcCcccCCCCceEEeccCCCcCCCCCCccccc
Q 009388            9 LPLGFRFRPTDEELINHYLRLKINGRDSEV-EVIPEIDVCKLEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRAT   87 (536)
Q Consensus         9 LPpGfRF~PTDEELV~~YL~~Ki~G~p~~~-~~I~evDVY~~ePWdLp~~s~~k~~d~eWYFFspr~rKy~nG~R~nRat   87 (536)
                      |||||||+|||+|||.+||++|+.|.+++. .+|+++|||.+|||+||.  ....++.+||||+++.+++++|.|++|++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~--~~~~~~~~~yFF~~~~~~~~~~~r~~R~~   78 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPA--KFKGGDEEWYFFSPRKKKYPNGGRPNRVT   78 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHH--HSSS-SSEEEEEEE----------S-EEE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhh--hccCCCceEEEEEecccccCCcccccccc
Confidence            899999999999999999999999999887 789999999999999994  22346779999999999999999999999


Q ss_pred             CCCeeeecCccceEeecCCCCceeeeeEEEEEEeecCCCCCCCcCeEEEEEec
Q 009388           88 EAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRP  140 (536)
Q Consensus        88 g~G~WKatGk~k~I~s~~sggg~vIG~KKtLvFY~grapkg~KT~WvMhEYrl  140 (536)
                      ++|+||++|+.++|...   ++.+||+||+|+||.++.+++.+|+|+||||+|
T Consensus        79 ~~G~Wk~~g~~~~i~~~---~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L  128 (129)
T PF02365_consen   79 GGGYWKSTGKEKPIKDP---GGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSL  128 (129)
T ss_dssp             TTEEEEEECEEEEEEE----TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE
T ss_pred             cceEEeecccccccccc---cceeeeeEEEEEEEeccCCCCCcCCeEEEEEEe
Confidence            99999999999999975   467999999999999888889999999999997

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	536
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		1e-39
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		2e-39
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		4e-39

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  160 bits (406), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 81/162 (50%), Positives = 105/162 (64%), Gaps = 8/162 (4%)
Query: 4   ISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTE 63
           ++  SLP GFRF PTDEEL+  YL  K  G D  +++I EID+ K +PW LP  ++    
Sbjct: 12  LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG-- 69
Query: 64  DPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRG 123
           + EW+FF PRDRKYPNG R NR   +GYWKATG D+ I +        +G+KK LVFY G
Sbjct: 70  EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTE----GQRVGIKKALVFYIG 125
Query: 124 RAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRK 165
           +APKG +TNWIMHEYR       + STK     +VLCR+++K
Sbjct: 126 KAPKGTKTNWIMHEYRLIEPSRRNGSTKLDD--WVLCRIYKK 165

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  160 bits (405), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 81/162 (50%), Positives = 105/162 (64%), Gaps = 8/162 (4%)
Query: 4   ISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTE 63
           ++  SLP GFRF PTDEEL+  YL  K  G D  +++I EID+ K +PW LP  ++    
Sbjct: 15  LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG-- 72
Query: 64  DPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRG 123
           + EW+FF PRDRKYPNG R NR   +GYWKATG D+ I +        +G+KK LVFY G
Sbjct: 73  EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTE----GQRVGIKKALVFYIG 128
Query: 124 RAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRK 165
           +APKG +TNWIMHEYR       + STK     +VLCR+++K
Sbjct: 129 KAPKGTKTNWIMHEYRLIEPSRRNGSTKLDD--WVLCRIYKK 168

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  159 bits (402), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 79/164 (48%), Positives = 101/164 (61%), Gaps = 9/164 (5%)
Query: 8   SLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEW 67
           +LP GFRF PTD+EL+ HYL  K  G+   V +I E+D+ K +PWDLP  ++      EW
Sbjct: 14  NLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAR--EW 71
Query: 68  FFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPK 127
           +FF PRDRKYPNG R NRA   GYWKATG D+ +  R       +G+KK LVFY G+AP+
Sbjct: 72  YFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPR----GRTLGIKKALVFYAGKAPR 127
Query: 128 GERTNWIMHEYRPTREDLLDSSTKPSQAA---FVLCRLFRKPEE 168
           G +T+WIMHEYR        +  K        +VLCRL+ K  E
Sbjct: 128 GVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNE 171

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	536
1ut7_A	171	No apical meristem protein; transcription regulati	4e-97
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	1e-95

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  290 bits (745), Expect = 4e-97
 Identities = 78/166 (46%), Positives = 103/166 (62%), Gaps = 8/166 (4%)

Query: 1   MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVI 60
              ++  SLP GFRF PTDEEL+  YL  K  G D  +++I EID+ K +PW LP  ++ 
Sbjct: 9   TDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALF 68

Query: 61  KTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVF 120
              + EW+FF PRDRKYPNG R NR   +GYWKATG D+ I +        +G+KK LVF
Sbjct: 69  G--EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTE----GQRVGIKKALVF 122

Query: 121 YRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKP 166
           Y G+APKG +TNWIMHEYR    +    +       +VLCR+++K 
Sbjct: 123 YIGKAPKGTKTNWIMHEYRL--IEPSRRNGSTKLDDWVLCRIYKKQ 166

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  287 bits (736), Expect = 1e-95
 Identities = 79/164 (48%), Positives = 101/164 (61%), Gaps = 9/164 (5%)

Query: 8   SLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEW 67
           +LP GFRF PTD+EL+ HYL  K  G+   V +I E+D+ K +PWDLP  ++      EW
Sbjct: 14  NLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALF--GAREW 71

Query: 68  FFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPK 127
           +FF PRDRKYPNG R NRA   GYWKATG D+ +  R       +G+KK LVFY G+AP+
Sbjct: 72  YFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPR----GRTLGIKKALVFYAGKAPR 127

Query: 128 GERTNWIMHEYRPTREDLLDSSTK---PSQAAFVLCRLFRKPEE 168
           G +T+WIMHEYR        +  K        +VLCRL+ K  E
Sbjct: 128 GVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNE 171

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	536
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=8.7e-54  Score=405.37  Aligned_cols=157  Identities=49%  Similarity=0.958  Sum_probs=132.0

Q ss_pred             cCCCCCcceEcCChHHHHHHHHHHHhCCCCCCceeeecccCCCCCCCCCCCcCcccCCCCceEEeccCCCcCCCCCCccc
Q 009388            6 MESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNR   85 (536)
Q Consensus         6 ~~~LPpGfRF~PTDEELV~~YL~~Ki~G~p~~~~~I~evDVY~~ePWdLp~~s~~k~~d~eWYFFspr~rKy~nG~R~nR   85 (536)
                      ...|||||||||||||||.|||++|+.|.++++.+|+++|||++|||+||+.+.  .++.+||||++|++||++|.|++|
T Consensus        12 ~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~--~g~~ewYFFs~r~~ky~~g~R~nR   89 (174)
T 3ulx_A           12 ELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERAL--FGAREWYFFTPRDRKYPNGSRPNR   89 (174)
T ss_dssp             TTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCS--SCSSEEEEEEECCC-----CCSCE
T ss_pred             ccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhc--cCCceEEEEeccccccCCCCCcee
Confidence            358999999999999999999999999999999999999999999999998763  357899999999999999999999


Q ss_pred             ccCCCeeeecCccceEeecCCCCceeeeeEEEEEEeecCCCCCCCcCeEEEEEecCCcccccC---CCCCCCCCEEEEEE
Q 009388           86 ATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDS---STKPSQAAFVLCRL  162 (536)
Q Consensus        86 atg~G~WKatGk~k~I~s~~sggg~vIG~KKtLvFY~grapkg~KT~WvMhEYrl~~~~l~~~---~~~~~~~e~VLCRI  162 (536)
                      +|++||||+||++++|..    ++.+||+||+|+||.|++|++.||+|+||||+|........   ......++||||||
T Consensus        90 ~t~~G~WkatG~dk~I~~----~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrv  165 (174)
T 3ulx_A           90 AAGNGYWKATGADKPVAP----RGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRL  165 (174)
T ss_dssp             EETTEEEEECSCCEEECC----SSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEE
T ss_pred             ecCCceEccCCCCcEEee----CCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEE
Confidence            999999999999999986    35799999999999999999999999999999976543210   01124679999999


Q ss_pred             EecCCc
Q 009388          163 FRKPEE  168 (536)
Q Consensus       163 fkK~~~  168 (536)
                      |+|+..
T Consensus       166 f~K~~~  171 (174)
T 3ulx_A          166 YNKKNE  171 (174)
T ss_dssp             EESCC-
T ss_pred             EEcCCC
Confidence            998753

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=1.8e-53  Score=402.36  Aligned_cols=156  Identities=50%  Similarity=0.944  Sum_probs=129.3

Q ss_pred             CcCCCCCcceEcCChHHHHHHHHHHHhCCCCCCceeeecccCCCCCCCCCCCcCcccCCCCceEEeccCCCcCCCCCCcc
Q 009388            5 SMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSN   84 (536)
Q Consensus         5 ~~~~LPpGfRF~PTDEELV~~YL~~Ki~G~p~~~~~I~evDVY~~ePWdLp~~s~~k~~d~eWYFFspr~rKy~nG~R~n   84 (536)
                      +...|||||||+|||||||.|||++|+.|.+++..+|+++|||++|||+||+.+  ..++.+||||+++++||++|.|++
T Consensus        13 ~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~--~~g~~ewyFFs~r~~k~~~g~R~~   90 (171)
T 1ut7_A           13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKA--LFGEKEWYFFSPRDRKYPNGSRPN   90 (171)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHS--SSCSSEEEEEEECCC-------CC
T ss_pred             cccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchh--hcCCccEEEEeccccccCCCCccc
Confidence            446899999999999999999999999999999999999999999999999875  346789999999999999999999


Q ss_pred             cccCCCeeeecCccceEeecCCCCceeeeeEEEEEEeecCCCCCCCcCeEEEEEecCCcccccCCCCCCCCCEEEEEEEe
Q 009388           85 RATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFR  164 (536)
Q Consensus        85 Ratg~G~WKatGk~k~I~s~~sggg~vIG~KKtLvFY~grapkg~KT~WvMhEYrl~~~~l~~~~~~~~~~e~VLCRIfk  164 (536)
                      |+|++||||+||++++|..    ++.+||+||+|+||+|++|++.||+|+||||+|......  ......++|||||||+
T Consensus        91 R~t~~G~Wk~tG~~k~I~~----~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~--~~~~~~~~~VlCrv~~  164 (171)
T 1ut7_A           91 RVAGSGYWKATGTDKIIST----EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRR--NGSTKLDDWVLCRIYK  164 (171)
T ss_dssp             EEETTEEEEEEEEEEEEEE----TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC----------CCEEEEEEEE
T ss_pred             ccCCCCEEeccCCCceEEe----cCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccc--cCcccCCCEEEEEEEE
Confidence            9999999999999999997    348999999999999999999999999999998754311  1223568999999999


Q ss_pred             cCCc
Q 009388          165 KPEE  168 (536)
Q Consensus       165 K~~~  168 (536)
                      |+..
T Consensus       165 k~~~  168 (171)
T 1ut7_A          165 KQSS  168 (171)
T ss_dssp             CC--
T ss_pred             cCCC
Confidence            9753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	536
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	4e-67

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  212 bits (540), Expect = 4e-67
 Identities = 81/165 (49%), Positives = 104/165 (63%), Gaps = 8/165 (4%)

Query: 1   MAVISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVI 60
              ++  SLP GFRF PTDEEL+  YL  K  G D  +++I EID+ K +PW LP  +  
Sbjct: 9   TDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKA-- 66

Query: 61  KTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVF 120
              + EW+FF PRDRKYPNG R NR   +GYWKATG D+ I +        +G+KK LVF
Sbjct: 67  LFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTE----GQRVGIKKALVF 122

Query: 121 YRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRK 165
           Y G+APKG +TNWIMHEYR       + STK     +VLCR+++K
Sbjct: 123 YIGKAPKGTKTNWIMHEYRLIEPSRRNGSTK--LDDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	536
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.4e-50  Score=377.70  Aligned_cols=155  Identities=50%  Similarity=0.958  Sum_probs=128.0

Q ss_pred             cCcCCCCCcceEcCChHHHHHHHHHHHhCCCCCCceeeecccCCCCCCCCCCCcCcccCCCCceEEeccCCCcCCCCCCc
Q 009388            4 ISMESLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCKLEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRS   83 (536)
Q Consensus         4 ~~~~~LPpGfRF~PTDEELV~~YL~~Ki~G~p~~~~~I~evDVY~~ePWdLp~~s~~k~~d~eWYFFspr~rKy~nG~R~   83 (536)
                      ++..+|||||||+|||||||.|||++|+.|.+++..+|+++|||++|||+||+..  ..++.+||||+++.+++++|.|.
T Consensus        12 ~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~--~~~~~~wyFft~~~~k~~~g~r~   89 (166)
T d1ut7a_          12 LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKA--LFGEKEWYFFSPRDRKYPNGSRP   89 (166)
T ss_dssp             CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHS--SSCSSEEEEEEECCC-------C
T ss_pred             cccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchh--ccCcceEEEEeeeccccCCCCcc
Confidence            3345899999999999999999999999999999999999999999999999764  34677899999999999999999


Q ss_pred             ccccCCCeeeecCccceEeecCCCCceeeeeEEEEEEeecCCCCCCCcCeEEEEEecCCcccccCCCCCCCCCEEEEEEE
Q 009388           84 NRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLF  163 (536)
Q Consensus        84 nRatg~G~WKatGk~k~I~s~~sggg~vIG~KKtLvFY~grapkg~KT~WvMhEYrl~~~~l~~~~~~~~~~e~VLCRIf  163 (536)
                      +|+|++|+||++|+++.|.+    ++.+||+||+|+||.++++++.+|+|+||||+|.......  .....++|||||||
T Consensus        90 ~R~~g~G~Wk~~g~~~~i~~----~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~--~~~~~~~~VLCrI~  163 (166)
T d1ut7a_          90 NRVAGSGYWKATGTDKIIST----EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRN--GSTKLDDWVLCRIY  163 (166)
T ss_dssp             CEEETTEEEEEEEEEEEEEE----TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC----------CCEEEEEEE
T ss_pred             ccccCCCEecccCCCceEec----CCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCccccc--CccccCCEEEEEEE
Confidence            99999999999999999986    4579999999999999999999999999999987543322  33456799999999


Q ss_pred             ecC
Q 009388          164 RKP  166 (536)
Q Consensus       164 kK~  166 (536)
                      +|+
T Consensus       164 ~Kk  166 (166)
T d1ut7a_         164 KKQ  166 (166)
T ss_dssp             ECC
T ss_pred             ecC
Confidence            985